isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
transcript_1.known	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84735	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00002_+_0_1000
transcript_10.known	ERCC-00028	+	1120	1	FSM	ERCC-00028A	DQ459419	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00028_+_0_1100
transcript_100.known	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1611	junction_5	2170.82762097777	5174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
transcript_10000.known	chr1	+	467	5	FSM	ENSG00000177954.14	ENST00000643794.1	467	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	13337.6215552099	15409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTATTGTCTTGTTT	0	True	NA	16	True	AATAAA	-16	NA	153990762	153992150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153990803_153990913_153991035_153991114_153991224_153991565_153991677_153992064
transcript_100003.known	chr3	+	1000	8	FSM	ENSG00000159685.11	ENST00000290913.8	1000	8	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	28.8825913247522	2860	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGCTGCCTACTCTGC	-2	True	NA	36	True	AATAAA	-42	NA	126704239	126960420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646_126852731_126914679_126914751_126957415_126957552_126960195
transcript_100005.known	chr3	-	1085	3	FSM	ENSG00000239620.3	ENST00000465482.3	1085	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTTAATGTGCTTATA	-1	False	NA	NA	False	AATAAA	-16	NA	127288046	127283782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_127284641_127287313_127287373_127287878
transcript_100010.nnic	chr3	-	1956	12	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_10	77.9316292847468	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	NA	False	NA	-19	True	AATAAA	-18	NA	127598285	127573068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
transcript_100013.known	chr3	-	3752	11	FSM	ENSG00000163870.16	ENST00000355552.8	3752	11	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_10	27.8251684631019	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTAAGTATGCATGCA	-9	True	NA	NA	False	AATAAA	-43	NA	127590733	127571231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590409
transcript_100014.nic	chr3	-	1824	11	NIC	ENSG00000163870.16	novel	1903	12	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_10	67.0340212131124	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	7114	False	NA	-19	True	AATAAA	-18	NA	127591115	127573068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590882
transcript_100024.nnic	chr3	-	999	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-2	-12331	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	8.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	NA	False	NA	NA	False	AAAACA	-14	NA	127598269	127592352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_127592955_127594799_127594934_127598006
transcript_100025.nnic	chr3	-	967	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-18	-12331	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	3	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	NA	False	NA	NA	False	AAAACA	-14	NA	127598285	127592352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_127592955_127594799_127594934_127598054
transcript_100026.nnic	chr3	-	810	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-2	-12331	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	NA	False	NA	NA	False	AAAACA	-14	NA	127598269	127592352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_127592955_127594799_127594934_127598195
transcript_100029.known	chr3	+	3434	16	FSM	ENSG00000073111.14	ENST00000265056.12	3434	16	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	98.2865651495101	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTATCTGTTGGCTTC	-12	True	NA	16	True	AATAAA	-18	NA	127598410	127622436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127598473_127599317_127599548_127604607_127604784_127604895_127605157_127606117_127606338_127606609_127606818_127608381_127608517_127608831_127609024_127615861_127615956_127616867_127617119_127617278_127617406_127617968_127618082_127619026_127619279_127620697_127620881_127621072_127621229_127621662
transcript_100032.nic	chr3	+	1634	2	ISM	ENSG00000073111.14	ENST00000474964.5	2847	16	0	20941	0	-3820	5prime_fragment	FALSE	canonical	3	687	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTATTGGGCTATA	-13	True	NA	NA	False	NA	NA	NA	127598409	127600888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_127598473_127599317
transcript_100033.known	chr3	+	2175	8	FSM	ENSG00000114631.11	ENST00000342480.7	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_4	28.2120252259021	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCCTTCTTGACTCAT	-7	True	NA	16	True	ATTAAA	-30	NA	127629184	127672802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127629290_127639244_127639524_127660377_127661160_127662236_127662312_127668440_127668598_127669140_127669203_127671433_127671614_127672267
transcript_100034.known	chr3	+	1915	12	FSM	ENSG00000114626.18	ENST00000475042.5	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	7.54490688045325	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	-15	True	NA	10	True	AATAAA	-20	NA	127672957	127680920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127673082_127674390_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_100036.known	chr3	+	1962	12	FSM	ENSG00000114626.18	ENST00000232744.13	1962	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	4.05336305629235	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCCTGGGGTACAG	-21	True	NA	16	True	AATAAA	-26	NA	127672951	127680926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127673082_127674390_127674454_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_100037.known	chr3	+	1961	12	FSM	ENSG00000114626.18	ENST00000453791.6	1961	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.3396852422639	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	-15	True	NA	10	True	AATAAA	-20	NA	127672957	127680920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127673082_127674344_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_10004.known	chr1	+	573	4	FSM	ENSG00000177954.14	ENST00000493224.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	12713.0359342946	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCCTGTTTATTGTCT	0	True	NA	11	True	AATAAA	-11	NA	153990762	153992145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153991035_153991114_153991224_153991565_153991677_153992064
transcript_100041.known	chr3	-	4941	8	FSM	ENSG00000074416.16	ENST00000265052.10	4271	8	-670	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88441513689613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCTGTCTGTCCATCA	7	True	NA	2	True	AATAAA	-17	NA	127823185	127689065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_127692324_127694974_127695191_127710575_127710666_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127822308
transcript_100042.known	chr3	-	4552	7	FSM	ENSG00000074416.16	ENST00000453507.7	4131	7	-421	0	303	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCTGTCCATCACAGT	-8	True	NA	6	True	AATAAA	-21	NA	127822882	127689061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_127692324_127694974_127695191_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127822308
transcript_100043.known	chr3	+	5727	6	FSM	ENSG00000187715.13	ENST00000405109.5	5727	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.46969384566991	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACTTTCATTTTGTTTT	-1	True	NA	NA	False	AATAAA	-16	NA	127915231	127987666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127915587_127922949_127924132_127927763_127928035_127930132_127930284_127963188_127963387_127984096
transcript_100045.known	chr3	+	2205	7	FSM	ENSG00000132394.11	ENST00000254730.11	2205	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	22.3532249723986	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	19	True	NA	16	True	AATAAA	-26	NA	128153480	128408646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128153824_128246835_128247044_128262127_128262225_128264616_128264782_128341232_128341890_128358216_128358374_128408068
transcript_100047.known	chr3	+	3568	12	FSM	ENSG00000058262.10	ENST00000243253.8	3568	12	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_7	63.4662661746282	849	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCATGTTCTCTTGAT	5	True	NA	25	True	AATAAA	-20	NA	128052436	128071683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128052560_128052834_128052903_128055515_128055582_128055672_128055752_128056708_128056841_128060101_128060212_128060507_128060662_128064876_128065038_128066953_128067152_128067420_128067613_128067982_128068060_128069475
transcript_100055.known	chr3	-	1899	11	FSM	ENSG00000175792.12	ENST00000322623.10	1899	11	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_6	76.4827431516417	2072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTTTACCTAATGTC	-9	True	NA	NA	False	NA	NA	NA	128123812	128080809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128081410_128082482_128082575_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128123583
transcript_100056.known	chr3	-	913	5	FSM	ENSG00000175792.12	ENST00000472125.5	913	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	417.215172303213	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTTATTAGACTCATG	NA	False	NA	NA	False	AATAAA	-15	NA	128101619	128064781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128065221_128097299_128097499_128098881_128098946_128100594_128100745_128101558
transcript_100060.known	chr3	-	2284	10	FSM	ENSG00000163902.12	ENST00000296255.8	2284	10	0	0	0	0	multi-exon	FALSE	canonical	3	1550	junction_5	104.562699012082	1157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGTCTGTTGAAGAT	-1	True	NA	-27	True	AATAAA	-20	NA	128650818	128619968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128620594_128622163_128622410_128625533_128625654_128625873_128626013_128626732_128626833_128629950_128630144_128631947_128632158_128637798_128638106_128644918_128644984_128650539
transcript_100062.known	chr3	+	1589	6	FSM	ENSG00000075785.14	ENST00000482525.5	1589	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	558.920960422849	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTGCAATGGATAAAT	16	True	NA	-26	True	AATACA	-3	NA	128726192	128814353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806450_128807542_128807672_128813326
transcript_100063.known	chr3	+	2185	6	FSM	ENSG00000075785.14	ENST00000265062.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1172	junction_5	126.604897219657	1604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGCCAGAGTC	6	True	NA	13	True	AATAAA	-20	NA	128726182	128814798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_100066.known	chr3	+	505	5	FSM	ENSG00000075785.14	ENST00000493186.6	505	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	591.042299670675	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCCTTCACAAACCAAGA	6	True	NA	NA	False	NA	NA	NA	128726182	128813445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798037_128807617_128807672_128813326
transcript_100069.known	chr3	+	2122	5	FSM	ENSG00000075785.14	ENST00000674748.1	2122	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	572.356259247682	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGCCTTTGCCAGAG	6	True	NA	11	True	AATAAA	-18	NA	128726182	128814796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128726360_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_100070.known	chr3	+	552	3	FSM	ENSG00000075785.14	ENST00000491681.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1400	junction_2	28	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACATCTTTGTCTCACC	130	False	NA	NA	False	NA	NA	NA	128726351	128798425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128726360_128795359_128795421_128797942
transcript_100071.known	chr3	+	1217	6	FSM	ENSG00000075785.14	ENST00000490093.6	1217	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	562.841931629121	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACAGTTAATCTGTGT	-20	True	NA	-9	True	NA	NA	NA	128726156	128813791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806616_128807554_128807672_128813326
transcript_100073.known	chr3	+	2431	18	FSM	ENSG00000177646.20	ENST00000511227.5	2431	18	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	53.490807023134	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGAGGTGGGTGGGGA	-7	True	NA	-69	True	GGGGCT	-17	NA	128879622	128912927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128880018_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_100077.known	chr3	-	6034	8	FSM	ENSG00000114656.13	ENST00000265068.9	6034	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	7.29830844253989	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	10	True	NA	NA	False	NA	NA	NA	128994115	128966588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128993042_128993337_128993979
transcript_100078.known	chr3	-	1632	7	FSM	ENSG00000114656.13	ENST00000515659.1	1632	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	7.39369100427294	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGCTTTTAATAAATG	2296	False	NA	-39	True	ATTAAA	-25	NA	128991897	128970979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128991478
transcript_10009.known	chr1	+	352	4	FSM	ENSG00000177954.14	ENST00000651669.1	352	4	0	0	0	0	multi-exon	FALSE	canonical	3	21616	junction_3	3984.7334498893	237018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTTGTTTAAGTG	-1	True	NA	21	True	AATAAA	-21	NA	153990761	153992155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153990803_153991114_153991224_153991565_153991677_153992064
transcript_100098.known	chr3	+	2445	18	FSM	ENSG00000177646.20	ENST00000308982.12	2445	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_13	22.4328293781688	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCTGTACTTGTCAC	-10	True	NA	29	True	TATAAA	-24	NA	128879619	128913114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_100099.known	chr3	+	2568	18	FSM	ENSG00000177646.20	ENST00000679431.1	2568	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	76.2419659389907	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	13	True	NA	17	True	TATAAA	-12	NA	128879642	128913102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128880018_128884674_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902633_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_10010.known	chr1	+	496	3	FSM	ENSG00000177954.14	ENST00000477151.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	21616	junction_2	4418	4045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTGTTTATTGTCTT	130	False	NA	12	True	AATAAA	-12	NA	153990920	153992146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153991224_153991565_153991677_153992064
transcript_100100.known	chr3	+	2401	17	FSM	ENSG00000177646.20	ENST00000505867.5	2401	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	60.2642293881702	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGGGTCATTCATTTAA	16	True	NA	18	True	AAGAAA	-15	NA	128879645	128913014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128880018_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_100101.known	chr3	+	565	1	FSM	ENSG00000273174.1	ENST00000608909.1	565	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTTTTGGTGGTAAA	2623	False	NA	NA	False	AATAAA	-18	NA	129123438	129124003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129123400_129124000
transcript_100102.known	chr3	-	1704	12	FSM	ENSG00000240682.10	ENST00000273541.12	1704	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	85.9920234624907	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCACGCAACCCACAAGT	15	True	NA	NA	False	NA	NA	NA	129161048	129129373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129130189_129130549_129130637_129134073_129134196_129134831_129134955_129137130_129137197_129140367_129140486_129145760_129145874_129156632_129156676_129156854_129156921_129158507_129158560_129159153_129159177_129160972
transcript_100103.known	chr3	-	335	1	FSM	ENSG00000273437.1	ENST00000609183.1	335	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGGTTGCTGTTCAG	7769	False	NA	-6	True	AATAAA	-16	NA	129163940	129163605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129163600_129163900
transcript_10011.known	chr1	+	625	2	FSM	ENSG00000177954.14	ENST00000392558.4	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	22443	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGCTTTGAGTTTGATT	-1	True	NA	NA	False	NA	NA	NA	153990761	153991698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153990803_153991114
transcript_100114.known	chr3	-	1549	5	FSM	ENSG00000169714.17	ENST00000504813.5	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_3	2600.62482876712	3430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-1	True	NA	-37	True	AATAAA	-27	NA	129183922	129169568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171633_129171772_129183775
transcript_100115.known	chr3	-	1623	5	FSM	ENSG00000169714.17	ENST00000446936.6	1623	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2777.87054233994	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGACAGTTTGGACTT	-5	True	NA	-18	True	ATTAAA	-21	NA	129183899	129169486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171654_129171772_129183775
transcript_100116.known	chr3	-	1516	5	FSM	ENSG00000169714.17	ENST00000500450.6	1516	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2686.89861876104	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	11	False	NA	-37	True	AATAAA	-27	NA	129183910	129169568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171654_129171772_129183775
transcript_100117.known	chr3	-	1040	5	FSM	ENSG00000169714.17	ENST00000441626.6	1040	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2735.24828626214	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCTATGAACTTCCATA	11	False	NA	NA	False	NA	NA	NA	129183910	129170101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171633_129171772_129183775
transcript_100119.known	chr3	+	3078	24	FSM	ENSG00000181789.14	ENST00000314797.10	3078	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	128.163161014427	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTACTTCTGCAGAC	-23	True	NA	34	True	AATAAA	-20	NA	129249605	129277773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622_129252695_129252875_129252956_129254667_129254744_129254984_129255078_129256067_129256155_129257469_129257628_129257726_129257861_129260332_129260401_129260618_129260808_129263903_129264000_129265548_129265793_129267023_129267100_129267936_129268041_129268494_129268621_129268931_129269001_129271766_129271910_129272243_129272416_129272806_129272905_129274837_129274977_129275193_129275293_129277293
transcript_10012.known	chr1	+	329	1	FSM	ENSG00000231416.1	ENST00000431295.1	329	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAACTTTTGAGTAA	32	False	NA	NA	False	NA	NA	NA	153995631	153995960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153995600_153996000
transcript_100123.known	chr3	+	730	4	FSM	ENSG00000181789.14	ENST00000513965.5	730	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	264.237687613928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCAGCCTCCAGGTGTG	-2	True	NA	NA	False	NA	NA	NA	129249626	129253098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622
transcript_100124.known	chr3	-	1030	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACAGGGATAAGATGGT	NA	False	NA	NA	False	AATAAA	-13	NA	129278782	129277752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129277800_129278800
transcript_100126.known	chr3	+	2485	7	FSM	ENSG00000183624.14	ENST00000383463.9	2485	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	214.463477854234	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	22	True	NA	15	True	AATAAA	-15	NA	129278869	129306186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_100132.nic	chr3	+	1671	7	NIC	ENSG00000183624.14	novel	1763	7	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	256.493448042808	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	50	False	NA	13	True	AATAAA	-25	NA	129278897	129305262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_129279044_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_100135.known	chr3	+	1952	7	FSM	ENSG00000183624.14	ENST00000502878.6	1952	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	229.104537032528	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTATTATGTTTCTTTT	-26	True	NA	NA	False	GGGGCT	-35	NA	129278955	129305441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129279204_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_100136.known	chr3	+	1763	7	FSM	ENSG00000183624.14	ENST00000389735.7	1763	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	243.967495558095	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	-8	True	NA	13	True	AATAAA	-25	NA	129278973	129305262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129279212_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_100138.known	chr3	+	1490	6	FSM	ENSG00000183624.14	ENST00000417226.6	1490	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	254.189692946036	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	-2	True	NA	44	True	AATAAA	-15	NA	129278845	129305293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129298353_129298536_129301949_129302143_129304588
transcript_100141.known	chr3	+	948	6	FSM	ENSG00000183624.14	ENST00000509042.5	948	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	229.653303917013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTCCTAGAGCAATGG	-20	True	NA	NA	False	NA	NA	NA	129278827	129304751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129278906_129279709_129279916_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_10015.known	chr1	-	1111	10	FSM	ENSG00000143549.21	ENST00000368530.7	1111	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2519.86119547178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACCCTGCATTTGTGTC	2624	False	NA	NA	False	ATTAAA	-24	NA	154192076	154167741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154167941_154169304_154169384_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154191185_154191312_154191901
transcript_100151.nic	chr3	+	1626	2	ISM	ENSG00000206417.8	ENST00000502789.2	922	5	-1422	5898	-1292	360	5prime_fragment	FALSE	canonical	3	54	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTAGTTCTT	1577	False	NA	32	True	ATTAAA	-21	NA	129316813	129318671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_129318311_129318542
transcript_100152.known	chr3	-	1516	1	FSM	ENSG00000184897.6	ENST00000333762.6	1516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTCTCGTTTAATCTGA	-1	True	NA	-10	True	AATAAA	-17	NA	129316286	129314770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129314800_129316300
transcript_100153.known	chr3	+	486	2	FSM	ENSG00000206417.8	ENST00000433902.2	486	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAAAAATTAGCCG	283	False	NA	NA	False	NA	NA	NA	129315519	129324547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129315639_129324180
transcript_100154.known	chr3	-	2161	5	FSM	ENSG00000251474.7	ENST00000510078.5	2161	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.2805141726785	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGGCTTTAATACACC	25	True	NA	3	True	AATAAA	-26	NA	129399405	129382921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129384219_129393634_129393796_129396216_129396421_129397039_129397141_129399007
transcript_100167.known	chr3	-	498	4	FSM	ENSG00000251474.7	ENST00000506593.1	498	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	12.657891697365	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGGGGTCTGAAGTTTG	NA	False	NA	NA	False	NA	NA	NA	129399655	129396195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129396421_129397039_129397141_129399380_129399496_129399598
transcript_100170.nic	chr3	-	674	3	ISM	ENSG00000251474.7	ENST00000510078.5	2161	5	-69	13393	-35	-97	5prime_fragment	FALSE	canonical	3	29	junction_2	0.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCAGAAA	NA	False	NA	NA	False	NA	NA	NA	129399474	129396314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_129396421_129397039_129397141_129399007
transcript_100173.known	chr3	-	1555	3	FSM	ENSG00000251474.7	ENST00000507287.5	1555	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGGCTTTAATACACC	2294	False	NA	3	True	AATAAA	-26	NA	129397136	129382921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129384219_129393634_129393796_129397039
transcript_100177.known	chr3	-	2470	8	FSM	ENSG00000129071.10	ENST00000249910.5	2470	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	73.6937956018285	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGATTCCTCTGGCAT	16	False	NA	NA	False	AATAAA	-23	NA	129440009	129430949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_100178.known	chr3	-	2099	8	FSM	ENSG00000129071.10	ENST00000503197.5	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	110.512350404092	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCTTTTCCAATGATGA	18	False	NA	0	True	AATAAA	-29	NA	129440007	129431265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_10018.known	chr1	-	1219	9	FSM	ENSG00000143549.21	ENST00000271850.11	1219	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	2242.93288742664	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACATTCCAAATAATT	2642	False	NA	NA	False	NA	NA	NA	154192058	154157317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154191185_154191312_154191901
transcript_100184.known	chr3	-	2194	7	FSM	ENSG00000129071.10	ENST00000507208.1	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	79.5335359036258	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCAGGAAGGTTTGGGC	-10	True	NA	NA	False	NA	NA	NA	129440035	129432175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_100190.nic	chr3	-	1299	3	ISM	ENSG00000129071.10	ENST00000507208.1	2194	7	-154	4525	-10	346	5prime_fragment	FALSE	canonical	3	289	junction_1	16.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATTGAGTTCAGGATCA	NA	False	NA	NA	False	AAAAAG	-4	NA	129440189	129436700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_129437309_129437719_129437951_129439729
transcript_100191.known	chr3	-	613	3	FSM	ENSG00000129071.10	ENST00000505883.1	613	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	156.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGCAGAGGACTCTCTAA	13	True	NA	NA	False	AAAAAG	-40	NA	129439937	129437046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129437309_129437807_129437951_129439729
transcript_100192.nic	chr3	-	948	3	ISM	ENSG00000129071.10	ENST00000507208.1	2194	7	-2	4724	-2	147	5prime_fragment	FALSE	canonical	3	289	junction_1	16.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTAGGAAGAGCTGTTC	-12	True	NA	NA	False	ACTAAA	-4	NA	129440037	129436899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_129437309_129437719_129437951_129439729
transcript_100194.known	chr3	+	3569	27	FSM	ENSG00000163913.14	ENST00000349441.6	3569	27	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_19	32.7347462105246	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	-24	True	NA	18	True	AATAAA	-18	NA	129440243	129520351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_100196.known	chr3	-	1633	2	FSM	ENSG00000004399.13	ENST00000501038.6	1633	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGGCTCCAGCCTTTGT	4267	False	NA	-1	True	AATAAA	-20	NA	129557034	129555213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129556429_129556616
transcript_100200.known	chr3	-	5631	4	FSM	ENSG00000172765.18	ENST00000432054.6	5631	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	18.1169043222683	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGTCAGACTCATGT	NA	False	NA	-16	True	AATAAA	-16	NA	129688732	129647791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129688176
transcript_100201.nnic	chr3	-	1772	3	Fusion	ENSG00000203644.3_ENSG00000172765.18	novel	557	4	NA	NA	-48	-5	multi-exon	FALSE	canonical	3	17	junction_1	7	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGACAGCATTCTTTTT	102	False	NA	-4	True	AATAAA	-16	NA	129893654	129847052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_-_129848413_129880308_129880560_129893493
transcript_100202.known	chr3	+	3556	3	FSM	ENSG00000271270.8	ENST00000605830.6	3556	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCAAAAGTTCTACTTT	NA	False	NA	NA	False	AATAAA	-19	NA	129893810	129908911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129893928_129901706_129901861_129905626
transcript_100204.known	chr3	+	2787	3	FSM	ENSG00000271270.8	ENST00000671446.1	2787	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGCTTTTTTTTTTTT	7	True	NA	NA	False	NA	NA	NA	129893874	129908002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129894132_129901706_129901861_129905626
transcript_100205.known	chr3	+	1560	3	FSM	ENSG00000170893.4	ENST00000302649.4	1560	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGAGCTCTGTGGTTGC	-1	True	NA	NA	False	AATAAA	-17	NA	129974719	129977935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129974824_129975808_129976028_129976698
transcript_100212.known	chr3	+	1420	4	FSM	ENSG00000249846.7	ENST00000665912.1	1420	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTCACTGTCATTACCA	923	False	NA	NA	False	AATAAA	-16	NA	130111668	130156175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130111813_130150380_130150485_130153323_130153584_130155263
transcript_100215.known	chr3	+	1652	5	FSM	ENSG00000249846.7	ENST00000670900.1	1652	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTAGCTTTGGCCACTG	1801	False	NA	NA	False	NA	NA	NA	130112546	130201336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130112745_130150380_130150485_130153323_130153584_130155263_130156295_130201277
transcript_100219.known	chr3	+	1732	3	FSM	ENSG00000249846.7	ENST00000504808.3	1732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAAGTGTTATGAACGTT	1782	False	NA	31	True	AATACA	-29	NA	130112527	130120579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130112745_130116836_130117093_130119320
transcript_100222.known	chr3	+	1466	2	FSM	ENSG00000249846.7	ENST00000658712.1	1466	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTGGTATATAGTAAG	1779	False	NA	18	True	AATACA	-16	NA	130112524	130120566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130112745_130119320
transcript_100224.known	chr3	+	1370	3	FSM	ENSG00000249846.7	ENST00000668664.1	1370	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTCACTGTCATTACCA	1801	False	NA	NA	False	AATAAA	-16	NA	130112546	130156175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130112745_130153323_130153584_130155263
transcript_100225.known	chr3	+	506	1	FSM	ENSG00000228252.9	ENST00000509855.1	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATGAGACTGTGTGT	NA	False	NA	7	True	AATAAA	-20	NA	130273300	130273806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130273300_130273800
transcript_100226.known	chr3	-	5016	20	FSM	ENSG00000196455.8	ENST00000356763.8	5016	20	0	0	0	0	multi-exon	TRUE	canonical	3	196	junction_17	31.3046862226949	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCATCCTAAGAGTTT	22	False	130746851	-12	True	ATTAAA	-28	NA	130746829	130678933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_130679486_130680612_130680722_130680976_130681066_130681490_130681592_130684249_130684382_130686210_130686423_130690489_130690655_130703722_130703889_130705560_130705772_130706947_130707136_130708290_130708493_130716395_130716600_130718388_130718535_130723413_130723588_130728462_130728685_130730307_130730443_130733547_130734131_130735868_130736003_130744485_130745265_130746317
transcript_100228.known	chr3	+	3401	28	FSM	ENSG00000017260.20	ENST00000359644.7	3401	28	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_27	105.018059718036	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTATTAAATATTATTCTC	78	False	NA	-3	True	AATACA	-4	NA	130894640	131016669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001345_131016151
transcript_100229.known	chr3	+	4795	27	FSM	ENSG00000017260.20	ENST00000428331.6	4795	27	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	61.8925510043211	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	-28	True	NA	23	True	AATAAA	-19	NA	130894534	131003150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_100236.known	chr3	+	2208	3	FSM	ENSG00000246082.3	ENST00000499077.3	2243	3	35	0	-32	0	multi-exon	FALSE	canonical	3	68	junction_1	41	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGGACCATATAGTAGT	11	True	NA	2	True	AATAAA	-16	NA	131361897	131365122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131362069_131362171_131362442_131363355
transcript_100239.nnic	chr3	-	371	3	NIC	ENSG00000250608.2	novel	1801	3	NA	NA	-4	-25	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTAATAAAATATGATC	NA	False	NA	-29	True	AATAAA	-23	NA	131361734	131327587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_131327731_131330808_131330868_131361565
transcript_100242.known	chr3	+	1706	2	FSM	ENSG00000246082.3	ENST00000498923.3	1773	2	67	0	-18	0	multi-exon	FALSE	canonical	3	150	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	25	True	NA	16	True	AATAAA	-28	NA	131361911	131364531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131362442_131363355
transcript_100245.nic	chr3	+	2616	2	ISM	ENSG00000246082.3	ENST00000499077.3	2243	3	-50	591	-32	0	intron_retention	FALSE	canonical	3	68	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	9313	False	NA	16	True	AATAAA	-28	NA	131361812	131364531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_131362069_131362171
transcript_100246.known	chr3	-	1801	3	FSM	ENSG00000250608.2	ENST00000668739.1	1801	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAACACACATGCTTTT	NA	False	NA	NA	False	NA	NA	NA	131361680	131325144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131326277_131327176_131327731_131361565
transcript_100247.known	chr3	-	2954	2	FSM	ENSG00000250608.2	ENST00000660567.1	2954	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGGCGGATCATGAG	NA	False	NA	NA	False	NA	NA	NA	131381656	131374128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131376708_131381281
transcript_100249.known	chr3	+	6108	3	FSM	ENSG00000198585.12	ENST00000521288.2	6108	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	4	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCAGGTTCTCACTTAT	-10	True	NA	25	True	AATAAA	-40	NA	131381773	131388830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131381943_131382045_131382316_131383161
transcript_100251.known	chr3	+	1552	2	FSM	ENSG00000198585.12	ENST00000502852.1	1552	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATGATACCAGATGA	1	True	NA	-11	True	NA	NA	NA	131381784	131383439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131381943_131382045
transcript_100253.known	chr3	-	1457	11	FSM	ENSG00000114686.9	ENST00000425847.6	1457	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	496.139990325311	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATTACCACATTAAA	-15	True	NA	-77	True	ATTAAA	-8	NA	131502983	131462555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502729
transcript_100261.known	chr3	-	1377	10	FSM	ENSG00000114686.9	ENST00000511168.5	1377	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	403.067895515212	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTATCTTAAGATGTCT	-15	True	NA	43	True	NA	NA	NA	131502983	131462435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502848
transcript_100279.known	chr3	+	938	3	FSM	ENSG00000248468.2	ENST00000662605.1	938	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTAGTGTCTCGTGTTG	NA	False	NA	NA	False	AATAAA	-33	NA	131502716	131520878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131503085_131517833_131517910_131520384
transcript_100280.known	chr3	-	1708	10	FSM	ENSG00000114686.9	ENST00000264995.8	1708	10	0	0	0	0	multi-exon	FALSE	canonical	3	1004	junction_6	110.49562864936	4941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTTTACATTTTTGT	-3	True	NA	-12	True	AATAAA	-14	NA	131502971	131462211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502729
transcript_100281.known	chr3	-	532	5	FSM	ENSG00000114686.9	ENST00000510154.1	532	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	652.955396639005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGGAAAACTGTAATGGA	-1	True	NA	NA	False	AATATA	-4	NA	131502937	131498246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502794
transcript_100282.known	chr3	+	732	3	FSM	ENSG00000248468.2	ENST00000669677.1	732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTAGTGTCTCGTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	131502839	131520877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131503003_131517833_131517910_131520384
transcript_100283.known	chr3	+	883	4	FSM	ENSG00000248468.2	ENST00000663361.1	883	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTAGTGTCTCGTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	131502891	131520877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131503085_131508780_131508902_131517833_131517910_131520384
transcript_100284.known	chr3	-	3749	16	FSM	ENSG00000196353.13	ENST00000429747.6	3749	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	3.59258495608199	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTAAGAGTTGTGGTC	14	True	NA	NA	False	AATAAA	-17	NA	132035014	131533568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131535330_131542556_131542794_131549946_131550081_131552439_131552492_131555496_131555552_131564215_131564350_131575070_131575131_131581578_131581666_131587483_131587583_131669674_131669765_131685874_131685959_131696541_131696617_131699908_131699981_131723445_131723626_131905263_131905445_132034566
transcript_10029.known	chr1	-	1248	7	FSM	ENSG00000143549.21	ENST00000509409.5	1248	7	0	0	0	0	multi-exon	FALSE	canonical	2	82	junction_6	1897.49929732091	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGGTGATTCCAGGA	-11	True	NA	NA	False	NA	NA	NA	154183227	154157111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154182987
transcript_100290.nnic	chr3	-	977	2	NNC	ENSG00000196353.13	novel	5431	20	NA	NA	-4250	-4137	intron_retention	FALSE	canonical	2	3	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGAAGACTTTATTTT	NA	False	NA	NA	False	AATAAA	-23	NA	132044500	132039448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_132040322_132044396
transcript_100294.known	chr3	+	1783	11	FSM	ENSG00000014257.16	ENST00000351273.11	1783	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	6.3718129288296	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAGGTTTAATACACA	-5	True	NA	11	True	AATAAA	-16	NA	132317406	132368298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685_132356856_132367703
transcript_100295.known	chr3	+	3174	10	FSM	ENSG00000014257.16	ENST00000336375.10	3174	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	5.92546294487706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCCTTTGTGTTTGGGGT	-5	True	NA	NA	False	AATAAA	-24	NA	132317406	132358841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685
transcript_1003.nic	chr1	-	2624	19	NIC	ENSG00000157881.16	novel	2641	19	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_4	35.2166136438927	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	-11	True	NA	-9	True	AATAGA	-14	NA	2526613	2508536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510749_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_100300.nnic	chr3	+	880	3	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	6.5	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAAGAGGCATTAAACA	NA	False	NA	NA	False	ATTAAA	-20	NA	132376796	132391049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_+_132377007_132377147_132377363_132390594
transcript_100307.nnic	chr3	+	974	2	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAAGAGGCATTAAACA	NA	False	NA	NA	False	ATTAAA	-20	NA	132376843	132391049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_+_132377363_132390594
transcript_100310.known	chr3	+	2306	20	FSM	ENSG00000138246.17	ENST00000486798.5	2306	20	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	7.58844434219729	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGTGTCCTAGTCTA	12	False	NA	50	True	AATAAA	-23	NA	132417708	132467346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132417761_132434537_132434619_132446474_132446551_132447320_132447471_132447897_132447940_132450646_132450848_132453297_132453505_132453598_132453695_132454065_132454158_132456234_132456402_132456500_132456581_132456662_132456833_132457268_132457369_132460249_132460358_132461049_132461206_132462466_132462524_132463695_132463818_132465994_132466071_132466298_132466395_132467169
transcript_100312.known	chr3	+	7754	56	FSM	ENSG00000138246.17	ENST00000260818.11	7754	56	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	22.4132044905942	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTTCTAGTTTAAT	-9	True	NA	30	True	AATAAA	-27	NA	132417501	132539032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132417761_132434537_132434619_132446474_132446551_132447320_132447471_132447897_132447940_132450646_132450848_132453297_132453505_132453598_132453695_132454065_132454158_132456234_132456402_132456500_132456581_132456662_132456833_132457268_132457369_132460249_132460358_132461049_132461206_132462466_132462524_132463695_132463818_132465994_132466071_132466298_132466395_132467169_132467314_132473144_132473228_132474931_132475086_132477788_132477893_132477980_132478141_132479226_132479290_132480368_132480471_132482225_132482331_132483374_132483578_132484587_132484673_132488297_132488453_132488975_132489022_132490896_132491052_132492413_132492616_132494143_132494260_132495087_132495167_132496527_132496664_132499125_132499311_132499733_132499809_132500793_132500914_132502288_132502469_132503213_132503382_132505301_132505416_132507236_132507354_132511066_132511245_132513007_132513100_132514570_132514671_132516421_132516497_132516703_132516817_132522827_132522998_132523156_132523200_132523539_132523714_132525609_132525790_132526140_132526282_132528188_132528333_132530997_132531098_132538175
transcript_100314.known	chr3	-	3231	20	FSM	ENSG00000240303.8	ENST00000264990.11	3231	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	10.7035086281513	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	-2	True	NA	-3	True	ATTAAA	-19	NA	132659809	132558140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_100316.nnic	chr3	-	2199	13	NNC	ENSG00000240303.8	novel	3231	20	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_12	17.6517232397671	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	NA	False	NA	-3	True	ATTAAA	-19	NA	132627157	132558140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132627061
transcript_100321.known	chr3	-	1891	11	FSM	ENSG00000240303.8	ENST00000481970.2	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	6.43816744112795	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGATTACCTACTATG	3	True	NA	NA	False	AATAAA	-19	NA	132659844	132618249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_100326.nnic	chr3	-	610	4	NNC	ENSG00000240303.8	novel	1891	11	NA	NA	-83	-214	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	28.3901391331568	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGACTATTCTTTTGTT	NA	False	NA	NA	False	AATATA	-21	NA	132627157	132618463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_132618773_132619467_132619546_132626690_132626818_132627061
transcript_100327.known	chr3	-	7784	45	FSM	ENSG00000274810.4	ENST00000471702.2	7784	45	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	21.6544400234057	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTTGTAATTTGTTTC	57	False	NA	-4	True	ATTAAA	-18	NA	132722459	132558141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132621131_132621293_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644892_132681913_132682091_132682702_132682819_132683398_132683525_132684553_132684795_132686259_132686388_132687150_132687227_132688649_132688892_132689073_132689264_132690527_132690651_132691191_132691287_132692653_132692819_132694826_132694966_132696730_132696814_132697259_132697363_132699917_132700062_132700333_132700449_132701429_132701534_132704197_132704372_132705739_132705815_132708100_132708258_132713125_132713287_132715084_132715219_132716756_132716910_132718993_132719145_132719704_132719831_132721962
transcript_100328.known	chr3	+	4692	12	FSM	ENSG00000081307.15	ENST00000356232.10	4692	12	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	21.5494817870235	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGGTATATTTGT	-38	True	NA	42	True	ACTAAA	-38	NA	132660328	132679794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132660699_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_10033.known	chr1	-	3148	8	FSM	ENSG00000143549.21	ENST00000368533.8	3148	8	0	0	0	0	multi-exon	FALSE	canonical	3	4813	junction_2	331.56118036726	4568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	-6	True	NA	-5	True	ATTAAA	-31	NA	154183189	154155307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_100331.known	chr3	+	2997	12	FSM	ENSG00000081307.15	ENST00000494238.6	2997	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	124.539017750056	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAACTACCAAATGTTT	-5	True	NA	13	True	AATAAA	-24	NA	132660361	132677782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132661049_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676442
transcript_100336.known	chr3	+	2058	12	FSM	ENSG00000081307.15	ENST00000493720.6	2058	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	130.765641101025	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTTGATTTCAGGAAGT	19	True	NA	NA	False	AATAAA	-24	NA	132659945	132677189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132660699_132665822_132665869_132665983_132666074_132668817_132668928_132670197_132670285_132670964_132671050_132671776_132671882_132672049_132672178_132675247_132675384_132675604_132675681_132675816_132675924_132676854
transcript_100339.known	chr3	+	3727	6	FSM	ENSG00000144868.14	ENST00000321871.11	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	30.3156725143943	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGCTAATACATTTT	3	True	NA	NA	False	AATAAA	-22	NA	133038390	133397775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133038436_133045901_133046021_133229265_133229352_133379751_133381162_133390179_133390335_133395863
transcript_10034.known	chr1	-	2108	8	FSM	ENSG00000143549.21	ENST00000330188.13	2108	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2415.42781945982	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGACCTATTTGACTT	11	True	NA	-11	True	AATAAA	-17	NA	154183205	154156363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154171412_154171489_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_100340.known	chr3	+	2165	6	FSM	ENSG00000144868.14	ENST00000393130.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	33.2601864095798	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	14	True	NA	18	True	AATAAA	-31	NA	133038401	133396228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133038436_133045901_133046021_133229269_133229352_133379751_133381162_133390179_133390335_133395863
transcript_100341.nic	chr3	+	850	5	NIC	ENSG00000144868.14	novel	3727	6	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	59.6170068017508	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	23	False	NA	18	True	AATAAA	-31	NA	133038310	133396228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_133038436_133045901_133046021_133229265_133229352_133390179_133390335_133395863
transcript_100343.nic	chr3	+	846	5	NIC	ENSG00000144868.14	novel	2165	6	NA	NA	-80	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_3	60.613529842767	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	23	False	NA	18	True	AATAAA	-31	NA	133038310	133396228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_133038436_133045901_133046021_133229269_133229352_133390179_133390335_133395863
transcript_100348.known	chr3	+	955	5	FSM	ENSG00000091527.17	ENST00000431519.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	153.585481084639	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCAGTGATTCACCAC	36	False	NA	103	True	NA	NA	NA	133573975	133587418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133587158
transcript_100349.known	chr3	+	3351	5	FSM	ENSG00000091527.17	ENST00000264993.8	3351	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	137.616314439822	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGACTGTAATGGTTAT	18	True	NA	15	True	AATAAA	-16	NA	133573685	133590261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133587895
transcript_10035.known	chr1	-	1115	8	FSM	ENSG00000143549.21	ENST00000368531.6	1115	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	1822.92445016803	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTAACTGCTTCATC	8970	False	NA	0	True	AATAAA	-17	NA	154183130	154158608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154159049_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_100350.known	chr3	+	3621	5	FSM	ENSG00000091527.17	ENST00000420115.6	3621	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	254.043672426613	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGACTGTAATGGTTA	39	False	NA	14	True	AATAAA	-15	NA	133574456	133590260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133574593_133575038_133575116_133584001_133584151_133586562_133586723_133587161
transcript_100353.known	chr3	+	554	5	FSM	ENSG00000091527.17	ENST00000511392.5	554	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	203.019703477273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACTTTAGGGACATGAAT	-2	True	NA	-44	True	ATTAAA	-25	NA	133574637	133587216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133574757_133575038_133575116_133584001_133584151_133586568_133586723_133587161
transcript_100356.known	chr3	-	5596	8	FSM	ENSG00000154917.11	ENST00000285208.9	5596	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.80654645556407	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTGTCTGTGTTTAAG	-4	True	NA	NA	False	AATAAA	-23	NA	133895882	133824234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_100361.known	chr3	+	2576	7	FSM	ENSG00000144867.13	ENST00000678299.1	2576	7	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	8.45412456864826	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCCTCTCAGCCTCTT	-7	True	NA	8	True	AATAAA	-32	NA	133805814	133821492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133806003_133806608_133806704_133807745_133807824_133811116_133811200_133815589_133815727_133816877_133816933_133819552
transcript_100367.known	chr3	-	4335	10	FSM	ENSG00000114019.15	ENST00000422605.6	4335	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	68.2024944332213	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTCTTTGCACAGGTG	-2	True	NA	-20	True	ATTAAA	-16	NA	134374447	134355876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134357764_134358539_134358717_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
transcript_100368.known	chr3	+	5293	13	FSM	ENSG00000182923.20	ENST00000383229.8	5293	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	58.6181143788619	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	1	True	NA	NA	False	ATTAAA	-17	NA	134486056	134565031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_100369.known	chr3	+	1740	13	FSM	ENSG00000182923.20	ENST00000514678.2	1740	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	65.161977665916	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTTGCCAAAGCTTC	-32	True	NA	5	True	AATAAA	-19	NA	134486175	134575013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_100372.known	chr3	+	5506	13	FSM	ENSG00000182923.20	ENST00000684677.1	5506	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	62.209993838075	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	-19	True	NA	NA	False	ATTAAA	-8	NA	134486188	134565022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_100374.known	chr3	+	1656	12	FSM	ENSG00000182923.20	ENST00000684170.1	1656	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	67.5483298054373	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTACTGTCATCTGAAGT	4	True	NA	NA	False	AATAAA	-14	NA	134486023	134561580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_100375.known	chr3	+	5033	12	FSM	ENSG00000182923.20	ENST00000682689.1	5033	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	62.5820453220747	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	-25	True	NA	NA	False	ATTAAA	-8	NA	134486182	134565022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545572_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_100377.known	chr3	+	1655	12	FSM	ENSG00000182923.20	ENST00000508778.2	1655	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	67.0686092528199	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	54	False	NA	-4	True	AATAAA	-10	NA	134486109	134575004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_100381.known	chr3	+	4904	11	FSM	ENSG00000182923.20	ENST00000682717.1	4904	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	64.7336079637154	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	-32	True	NA	NA	False	ATTAAA	-8	NA	134486175	134565022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_100385.known	chr3	+	7253	12	FSM	ENSG00000182923.20	ENST00000682042.1	7253	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	41.9639751049823	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATGGATGAACCTTGA	-11	True	NA	NA	False	AAAAAG	-31	NA	134486044	134567117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_100388.known	chr3	+	5261	11	FSM	ENSG00000182923.20	ENST00000684481.1	5261	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	68.6279826309939	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	-35	True	NA	NA	False	ATTAAA	-8	NA	134486172	134565022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_100389.known	chr3	+	2182	13	FSM	ENSG00000182923.20	ENST00000684217.1	2182	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	56.1685830533602	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCTCATACGAATAT	16	True	NA	14	True	AATAAA	-14	NA	134485753	134561767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_100390.known	chr3	+	1835	12	FSM	ENSG00000182923.20	ENST00000354446.7	1835	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	51.3744960362163	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTATTTTGCCAAAGCT	53	False	NA	3	True	AATAAA	-17	NA	134485790	134575011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_100391.known	chr3	+	2723	15	FSM	ENSG00000182923.20	ENST00000683596.1	2723	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	75.920507568033	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCTCATACGAATAT	NA	False	NA	14	True	AATAAA	-14	NA	134485698	134561767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134558141_134558348_134559149_134559430_134561376
transcript_100392.known	chr3	+	3753	13	FSM	ENSG00000288700.2	ENST00000683452.1	3753	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	70.9061880233312	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCATGACTGATGATTGA	-17	True	NA	NA	False	NA	NA	NA	134485720	134629751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134615183_134615439_134627939
transcript_100393.nnic	chr3	-	479	4	NNC	ENSG00000129055.13	novel	1170	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	216.358242017467	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	NA	False	NA	-3	True	ACTAAA	-19	NA	134486034	134477705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_134477796_134478535_134478716_134482805_134482932_134485951
transcript_100395.known	chr3	-	1420	3	FSM	ENSG00000129055.13	ENST00000514612.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	261.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTATGCTGGGTCTTTT	-4	True	NA	-8	True	ACTAAA	-14	NA	134485989	134477710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134478716_134482805_134482932_134485700
transcript_100396.known	chr3	-	1170	3	FSM	ENSG00000129055.13	ENST00000354910.10	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	107.5	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	0	True	NA	-3	True	ACTAAA	-19	NA	134485985	134477705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134478716_134482805_134482932_134485951
transcript_100398.known	chr3	-	1840	3	FSM	ENSG00000129055.13	ENST00000510994.5	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	217	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	NA	False	NA	-3	True	ACTAAA	-19	NA	134486023	134477705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134478716_134482805_134482932_134485319
transcript_1004.known	chr1	-	2641	19	FSM	ENSG00000157881.16	ENST00000378466.9	2641	19	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_4	20.5439156232643	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	6	True	NA	-9	True	AATAGA	-14	NA	2526596	2508536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510783_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_100402.known	chr3	-	1961	5	FSM	ENSG00000240086.7	ENST00000657055.1	1961	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.52627944162882	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCTTTGAACATTTA	NA	False	NA	NA	False	AATAGA	-38	NA	135439862	135354811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135356322_135357271_135357383_135379261_135379428_135379780_135379848_135439755
transcript_100407.known	chr3	-	1974	4	FSM	ENSG00000240086.7	ENST00000653803.1	1974	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.48528137423857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTTTTCATTGAG	NA	False	NA	NA	False	AATAAA	-25	NA	135439864	135354784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135356417_135379261_135379428_135379780_135379848_135439755
transcript_100408.known	chr3	-	1868	4	FSM	ENSG00000240086.7	ENST00000466206.6	1868	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6.12825877028341	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATAAGTCTCTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	135439864	135354795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135356322_135379261_135379428_135379780_135379848_135439755
transcript_10041.known	chr1	-	1678	7	FSM	ENSG00000143612.21	ENST00000368521.10	1678	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	224.485089829048	3570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-19	True	NA	-19	True	AATAAA	-22	NA	154220590	154206719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_100411.known	chr3	-	867	4	FSM	ENSG00000240086.7	ENST00000459861.6	867	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	7.07106781186548	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTCTTAAACACTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	135439862	135373794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135374322_135379261_135379428_135379780_135379848_135439755
transcript_100413.known	chr3	+	6743	14	FSM	ENSG00000073711.11	ENST00000264977.8	6743	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	13.3270202016663	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTCATTAAGGTAATT	-21	True	NA	10	True	AATAAA	-16	NA	135965727	136147894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_135965850_136001058_136003494_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
transcript_100415.known	chr3	-	1304	8	FSM	ENSG00000118007.13	ENST00000480733.1	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	34.5478077511173	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTCTTTATGTCTGTT	18	True	NA	NA	False	ATTAAA	-18	NA	136752366	136518042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136518416_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_100421.nic	chr3	-	434	3	ISM	ENSG00000118007.13	ENST00000480733.1	1304	8	-70	105126	-33	-105126	5prime_fragment	FALSE	canonical	3	108	junction_2	9	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTCGTCCTGGCCGGCCT	NA	False	NA	NA	False	AAAAAG	-6	NA	136752436	136623168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_136623249_136630869_136630982_136752194
transcript_100422.known	chr3	-	6062	34	FSM	ENSG00000118007.13	ENST00000383202.7	6062	34	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	14.0583854045781	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	6	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136341440_136341552_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_100433.known	chr3	+	1844	16	FSM	ENSG00000114054.14	ENST00000466072.5	1844	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	180.509205674761	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326325_136326386_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_100434.known	chr3	+	1799	15	FSM	ENSG00000114054.14	ENST00000251654.9	1799	15	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_10	42.6304121586494	2018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	-14	True	NA	22	True	ATTAAA	-14	NA	136250339	136330169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_100435.known	chr3	+	1613	13	FSM	ENSG00000114054.14	ENST00000490504.5	1613	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.512861204468	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_100436.known	chr3	+	1715	14	FSM	ENSG00000114054.14	ENST00000462637.5	1715	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	148.196614962659	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_100437.known	chr3	+	1683	14	FSM	ENSG00000114054.14	ENST00000484181.5	1683	14	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_11	142.700870570359	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327633_136327733_136328757_136328858_136329904
transcript_100438.known	chr3	+	1841	16	FSM	ENSG00000114054.14	ENST00000469217.5	1841	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	184.155248514821	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGCCTTACTGTAAA	5	True	NA	23	True	ATTAAA	-15	NA	136250358	136330170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136259175_136259236_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_100439.known	chr3	+	1727	14	FSM	ENSG00000114054.14	ENST00000483687.5	1727	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	149.476601640089	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	1	True	NA	22	True	ATTAAA	-14	NA	136250354	136330169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_10046.known	chr1	-	1610	6	FSM	ENSG00000143612.21	ENST00000350592.7	1610	6	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_5	117.559176587793	4242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	5	True	NA	-19	True	AATAAA	-22	NA	154220624	154206719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_100464.known	chr3	+	1937	4	FSM	ENSG00000158092.7	ENST00000288986.6	1937	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	22.9540604009158	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCCTCATCTGGT	-16	True	NA	7	True	AATAAA	-21	NA	136862207	136949126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136862320_136927983_136928228_136945582_136946296_136948258
transcript_100466.known	chr3	+	4451	4	FSM	ENSG00000158092.7	ENST00000481752.6	4451	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	60.0518294660722	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAATCTCTGAAACGT	-16	True	NA	NA	False	AATAAA	-24	NA	136862207	136951606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136862354_136927983_136928228_136945582_136946296_136948258
transcript_100475.known	chr3	-	2046	4	FSM	ENSG00000239213.7	ENST00000661609.1	2046	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	36.9954952212653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTAAAATGAGGAACTCTA	5	True	NA	NA	False	AAGAAA	-11	NA	136862031	136835344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136836984_136842230_136842294_136846527_136846587_136861746
transcript_100489.known	chr3	-	827	4	FSM	ENSG00000239213.7	ENST00000474250.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	47.6398525979621	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTTTACCTTTTTTTC	-13	True	NA	-118	True	GATAAA	-5	NA	136862049	136842190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842570_136846527_136846587_136858517_136858604_136861746
transcript_100503.known	chr3	-	2304	3	FSM	ENSG00000239213.7	ENST00000666310.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	52	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCGTCCCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136862272	136841024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842570_136846527_136846587_136861572
transcript_100504.known	chr3	-	1943	3	FSM	ENSG00000239213.7	ENST00000470236.2	1943	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	57.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATGGTGGTTCATGCC	-18	True	NA	NA	False	AATACA	-32	NA	136862054	136841125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842570_136846527_136846587_136861614
transcript_100505.known	chr3	-	1818	3	FSM	ENSG00000239213.7	ENST00000461864.7	1860	3	42	0	-4	0	multi-exon	FALSE	canonical	3	85	junction_2	15.5	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-1	True	NA	NA	False	NA	NA	NA	136862037	136841101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842570_136846527_136846587_136861746
transcript_100515.known	chr3	+	1577	2	FSM	ENSG00000168917.9	ENST00000393079.3	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	-32	True	NA	14	True	ATTAAA	-17	NA	136819083	136855888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136819215_136854442
transcript_100517.known	chr3	+	1949	2	FSM	ENSG00000168917.9	ENST00000446465.3	1949	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	10	True	NA	14	True	ATTAAA	-17	NA	136819125	136855888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136819629_136854442
transcript_100519.known	chr3	+	794	2	FSM	ENSG00000158092.7	ENST00000478862.1	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCTCCAAAGTTTTT	2	True	NA	NA	False	NA	NA	NA	136862266	136928724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136862320_136927983
transcript_10052.known	chr1	-	1163	6	FSM	ENSG00000143612.21	ENST00000368519.5	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	306.234811868279	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTAAAAATCTTCACT	-14	True	NA	NA	False	NA	NA	NA	154220585	154207175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154219835_154219938_154220341
transcript_100521.known	chr3	+	577	2	FSM	ENSG00000158092.7	ENST00000460960.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTTCTAGCAGGGGCT	2	True	NA	NA	False	NA	NA	NA	136862266	136928473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136862354_136927983
transcript_100525.known	chr3	+	1929	7	FSM	ENSG00000174564.13	ENST00000329582.9	1929	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.92498812913071	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTAGTTACATTTTCAAC	-5	True	NA	19	True	AATAAA	-33	NA	136957982	137011085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136958202_136980465_136980593_136982159_136982351_136989440_136989566_136991937_136992089_136995413_136995557_137010112
transcript_100526.known	chr3	+	3355	5	FSM	ENSG00000066405.13	ENST00000183605.10	3355	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.11803398874989	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAATAGCTTCTGCTCTT	3	True	NA	NA	False	ATTAAA	-18	NA	138010164	138033649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138010446_138023657_138023823_138024606_138024725_138029796_138029908_138030969
transcript_100528.known	chr3	-	3492	16	FSM	ENSG00000158163.15	ENST00000327532.7	3492	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	7.38466880322559	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGTATGTATTTCATTA	12	True	NA	-6	True	AATATA	-39	NA	138115608	138061989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138062978_138064627_138064768_138067530_138067701_138068150_138068368_138071642_138071836_138077498_138077633_138080566_138080621_138081733_138081765_138084112_138084254_138086960_138087024_138088378_138088508_138092382_138092545_138094861_138094984_138097762_138097848_138103470_138104053_138115327
transcript_100529.known	chr3	-	2662	8	FSM	ENSG00000138231.13	ENST00000260803.9	2662	8	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_1	10.7228537170258	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGATTAGTATAACC	-5	True	NA	63	True	AATAAA	-42	NA	138174921	138160987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138162583_138163348_138163495_138163777_138163859_138167080_138167306_138170106_138170193_138171632_138171714_138173501_138173627_138174598
transcript_100533.known	chr3	-	623	4	FSM	ENSG00000138231.13	ENST00000463982.2	623	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.8687165354081	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTTAGTAGAGACGG	-4	True	NA	NA	False	NA	NA	NA	138174866	138171319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138171469_138171632_138171714_138173501_138173627_138174598
transcript_100535.known	chr3	+	3043	23	FSM	ENSG00000114098.18	ENST00000481646.5	3043	23	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	78.6746228525548	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAGAAAAAGTT	NA	False	NA	42	True	TATAAA	-6	NA	138187266	138296549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_100539.known	chr3	+	2777	22	FSM	ENSG00000114098.18	ENST00000491704.5	2777	22	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	84.7067236111946	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTTTGAATGAAATG	6	True	NA	102	True	TATAAA	-17	NA	138187300	138296394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_10054.known	chr1	-	1278	6	FSM	ENSG00000143612.21	ENST00000368518.5	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_5	236.896264217062	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATAGTTTTTCAGCACA	951	False	NA	5	True	AATAAA	-28	NA	154220533	154211733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_100542.known	chr3	+	4757	22	FSM	ENSG00000114098.18	ENST00000469044.6	4757	22	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	72.7931869927561	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAACTTCTAAAAAGGAG	6	True	NA	4	True	AATAAA	-16	NA	138187300	138298373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_100548.nic	chr3	+	2876	21	NIC	ENSG00000114098.18	novel	4757	22	NA	NA	6	0	intron_retention	FALSE	canonical	3	69	junction_1	81.8083125360742	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	NA	False	NA	34	True	AATATA	-41	NA	138187272	138296541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_100551.known	chr3	+	2221	21	FSM	ENSG00000114098.18	ENST00000461822.5	2221	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	88.2524078991616	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGGCCAGAATGAATG	-19	True	NA	-38	True	AATGAA	-43	NA	138187516	138296254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_100553.known	chr3	+	4728	21	FSM	ENSG00000114098.18	ENST00000538260.5	4728	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	84.7746424351056	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGAGTCTGTTTTCCA	NA	False	NA	15	True	AATAAA	-27	NA	138187247	138298384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_100556.known	chr3	+	1920	20	FSM	ENSG00000114098.18	ENST00000485396.5	1920	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	92.1692108835865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGGAAGTACAGGAACC	-8	True	NA	NA	False	NA	NA	NA	138187527	138295933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_100559.known	chr3	+	2910	13	FSM	ENSG00000114098.18	ENST00000471453.5	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	84.4397796591683	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAGTTATAA	-7	True	NA	NA	False	NA	NA	NA	138187528	138246857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_100560.known	chr3	+	3181	13	FSM	ENSG00000114098.18	ENST00000358441.6	3181	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	108.299225399918	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTTGTGTGGTAAAG	11	True	NA	NA	False	AATAAA	-24	NA	138187341	138246887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_100563.nic	chr3	+	1918	12	ISM	ENSG00000114098.18	ENST00000491704.5	2777	22	-33	50713	1	0	5prime_fragment	FALSE	canonical	3	55	junction_2	97.5628638196636	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	NA	False	NA	7	True	AATAAA	-17	NA	138187267	138245681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_100565.known	chr3	+	1656	12	FSM	ENSG00000114098.18	ENST00000470821.5	1656	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	62.6815380045159	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	-5	True	NA	7	True	AATAAA	-17	NA	138187530	138245681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_100569.known	chr3	+	1714	11	FSM	ENSG00000114098.18	ENST00000489213.5	1714	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	85.8580223392083	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTACTGTGCAAGTTTAA	19	False	NA	24	True	NA	NA	NA	138187349	138245635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_100579.nic	chr3	+	1144	8	ISM	ENSG00000114098.18	ENST00000471453.5	2910	13	-261	11571	1	186	5prime_fragment	FALSE	canonical	3	99	junction_2	107.906043786779	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCCTTGCATCTCTTT	NA	False	NA	NA	False	TTTAAA	-12	NA	138187267	138235286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033
transcript_100580.nic	chr3	+	854	7	ISM	ENSG00000114098.18	ENST00000471453.5	2910	13	-183	17806	4	0	5prime_fragment	FALSE	canonical	3	99	junction_2	112.144252341943	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGCCTTTAAGAGATGTA	15	True	NA	NA	False	AATAAA	-25	NA	138187345	138229051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917
transcript_100582.nic	chr3	+	1053	7	ISM	ENSG00000114098.18	ENST00000470821.5	1656	12	-248	10395	16	186	5prime_fragment	FALSE	canonical	3	145	junction_1	83.4898530095458	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCCTTGCATCTCTTT	-12	True	NA	NA	False	TTTAAA	-12	NA	138187282	138235286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033
transcript_100594.known	chr3	+	4538	6	FSM	ENSG00000158186.13	ENST00000289104.8	4538	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.6182705963792	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	NA	False	NA	12	True	AATAAA	-14	NA	138347696	138405533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138348326_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_100598.nic	chr3	+	1361	6	NIC	ENSG00000158186.13	novel	1534	5	NA	NA	-15	-399	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	10.1862652625975	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTAACATATCTGGAATA	-29	True	NA	27	True	NA	NA	NA	138348834	138402787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_138349033_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_1006.known	chr1	+	2747	7	FSM	ENSG00000157870.17	ENST00000419916.8	2747	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	75.4939291157463	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGCTTTCTTCTTT	-31	True	NA	19	True	AATAAA	-19	NA	2586776	2591468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
transcript_100602.nnic	chr3	+	600	3	NNC	ENSG00000158186.13	novel	271	2	NA	NA	-15	458	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	13	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTTCTTAATGAGCATA	-29	True	NA	NA	False	AATAAA	-15	NA	138348834	138373411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_138349033_138372865_138373077_138373220
transcript_100604.known	chr3	+	394	2	FSM	ENSG00000158186.13	ENST00000477784.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACAGCTTGCCCAAGAT	43	False	NA	NA	False	AAAAAG	-2	NA	138348906	138349951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138349033_138349683
transcript_100605.known	chr3	+	4044	22	FSM	ENSG00000158220.14	ENST00000486831.5	4044	22	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_17	6.88321762021631	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTTGGATTTTT	5	True	NA	NA	False	TTTAAA	-12	NA	138434585	138477060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138435126_138452047_138452090_138455193_138455329_138457567_138457645_138459186_138459254_138459944_138460035_138460610_138460667_138462085_138462207_138464344_138464516_138465338_138465422_138467560_138467610_138468104_138468195_138468654_138468718_138468818_138468882_138469435_138469505_138470059_138471027_138472362_138473094_138473535_138473635_138474220_138474353_138476222_138476329_138476442_138476493_138476817
transcript_100617.known	chr3	-	1993	18	FSM	ENSG00000114107.9	ENST00000484888.5	1993	18	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_16	60.1127544918311	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTACTGTGTAAATT	28	True	NA	NA	False	ATTAAA	-29	NA	138594224	138495002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_100618.known	chr3	-	2028	18	FSM	ENSG00000114107.9	ENST00000474781.5	2028	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	88.1766471763723	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATCAAATCATTTTTAC	6	True	NA	NA	False	ATTAAA	-19	NA	138594339	138495012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572915_138591853_138591957_138594197
transcript_100619.known	chr3	-	569	3	FSM	ENSG00000114107.9	ENST00000459695.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	120.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGGTAACACTTATTT	NA	False	NA	-23	True	AATAAA	-16	NA	138500180	138496909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138497328_138498030_138498111_138500109
transcript_100620.known	chr3	-	2037	16	FSM	ENSG00000114107.9	ENST00000481834.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_14	48.0595001592355	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	4	True	NA	-9	True	ATTAAA	-16	NA	138594248	138499883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
transcript_100621.known	chr3	-	1016	10	FSM	ENSG00000114107.9	ENST00000468900.5	1016	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	114.023497686623	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTATATTTTTACCAAA	14	True	NA	NA	False	TATAAA	-45	NA	138594238	138525489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571354_138591853_138591957_138594197
transcript_100622.known	chr3	-	1054	6	FSM	ENSG00000114107.9	ENST00000464035.5	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	81.2664752527141	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTCAAAATAACTGAT	2389	False	NA	-13	True	AATAAA	-17	NA	138591956	138536918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853
transcript_100623.known	chr3	+	1622	6	FSM	ENSG00000158234.13	ENST00000338446.8	1622	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	78.7918777539919	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	22	False	NA	NA	False	AATAAA	-15	NA	138608608	138633376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138608938_138610603_138611038_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_100624.known	chr3	+	927	5	FSM	ENSG00000158234.13	ENST00000393034.6	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	47.1062628532555	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTGCTTGATTTG	8	True	NA	NA	False	AATAAA	-8	NA	138609071	138633369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138609147_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_100627.known	chr3	+	946	5	FSM	ENSG00000158234.13	ENST00000393035.6	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	5.80409338312195	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	77	False	NA	NA	False	AATAAA	-15	NA	138608850	138633376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138608938_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_100629.known	chr3	-	6259	24	FSM	ENSG00000051382.9	ENST00000674063.1	6259	24	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_22	23.409238316599	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTTGTGCTATCAAATA	25	False	138834953	NA	False	ATTAAA	-17	NA	138834928	138652697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
transcript_100630.known	chr3	-	4658	23	FSM	ENSG00000051382.9	ENST00000477593.5	4658	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_22	46.7893335658587	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCTCTTCTTTATGG	201	False	NA	-3	True	AATAAA	-33	NA	138834752	138654017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138834694
transcript_100638.nic	chr3	-	2423	4	ISM	ENSG00000051382.9	ENST00000674063.1	6259	24	18	101367	7	1692	5prime_fragment	FALSE	canonical	3	176	junction_2	33.4896335536171	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTATAGTCTTATCATC	-13	True	NA	NA	False	CATAAA	-43	NA	138834910	138754064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_138755980_138759172_138759360_138796462_138796568_138834694
transcript_100641.nnic	chr3	+	370	3	Antisense	novelGene_ENSG00000244578.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTAGAAATACTTGTTC	NA	False	NA	NA	False	ATTAAA	-35	NA	138935876	138939357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_138935966_138938583_138938768_138939260
transcript_100643.known	chr3	+	4094	3	FSM	ENSG00000206262.9	ENST00000383165.4	4094	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCTTTTTGTGAAGGGT	-1	True	NA	20	True	AATAAA	-22	NA	138947216	138953990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138947465_138949519_138949640_138950264
transcript_100645.known	chr3	+	1065	8	FSM	ENSG00000175110.14	ENST00000478464.6	4352	8	0	3287	0	-32	multi-exon	TRUE	canonical	3	27	junction_1	156.660428302486	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTTAAAAATACATT	19	False	NA	-25	True	NA	NA	NA	139344564	139357014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139344719_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_100648.known	chr3	+	1205	8	FSM	ENSG00000175110.14	ENST00000680020.1	1205	8	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_1	48.1269579511593	2229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAATTATTACCC	7	True	NA	19	True	ATTAAA	-26	NA	139344019	139357129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_100649.known	chr3	+	1774	7	FSM	ENSG00000175110.14	ENST00000480938.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	45.4327953012897	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATTTCTCTGTTAATA	14	True	NA	12	True	AATACA	-20	NA	139344026	139357051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139351061_139352646_139352793_139355681_139355791_139356918
transcript_100655.known	chr3	-	3495	23	FSM	ENSG00000184432.11	ENST00000514508.2	3495	23	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_21	243.057372576181	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-16	True	NA	-5	True	NA	NA	NA	139389670	139357405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385201_139389547
transcript_100656.known	chr3	-	3734	23	FSM	ENSG00000184432.11	ENST00000512242.6	3734	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	261.223630485389	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	NA	False	NA	-5	True	NA	NA	NA	139389680	139357405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385430_139389547
transcript_100659.known	chr3	-	3275	22	FSM	ENSG00000184432.11	ENST00000333188.10	3275	22	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_9	59.9231934700268	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	7	True	NA	-5	True	NA	NA	NA	139389647	139357405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_100662.known	chr3	-	6602	21	FSM	ENSG00000184432.11	ENST00000677309.1	6602	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_14	213.20770975741	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGCGTTGCTCTAATT	-3	True	NA	-3	True	AATAAA	-16	NA	139389657	139353945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_100666.known	chr3	-	3373	21	FSM	ENSG00000184432.11	ENST00000512309.2	3373	21	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_8	60.9397243183787	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCATACTATTAGAC	NA	False	NA	-17	True	ACTAAA	-18	NA	139389736	139357637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_10067.known	chr1	-	1551	5	FSM	ENSG00000143612.21	ENST00000362076.8	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	310.170416867889	3051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	10	True	NA	-19	True	AATAAA	-22	NA	154220619	154206719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154220341
transcript_100670.known	chr3	-	3524	2	FSM	ENSG00000184432.11	ENST00000504295.1	3524	2	0	0	0	0	multi-exon	FALSE	canonical	3	907	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	8	True	NA	NA	False	NA	NA	NA	139389646	139380010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139383436_139389547
transcript_100678.known	chr3	+	1201	4	FSM	ENSG00000248932.7	ENST00000653359.1	1201	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.7973274814304	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATAAGTGCTTTCTTTT	7	False	NA	NA	False	AATAAA	-18	NA	139389760	139445098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139389934_139419556_139419681_139423015_139423115_139444293
transcript_100681.nic	chr3	+	963	4	FSM	ENSG00000248932.7	ENST00000691594.1	1414	4	-46	497	3	0	multi-exon	FALSE	canonical	3	8	junction_1	12.0277457017791	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	-27	True	NA	75	True	AATAAA	-16	NA	139389808	139444604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139390238_139419556_139419681_139423015_139423115_139444293
transcript_100682.nic	chr3	+	1457	4	FSM	ENSG00000248932.7	ENST00000691594.1	1414	4	-46	3	3	0	multi-exon	FALSE	canonical	3	8	junction_1	12.0277457017791	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATAAGTGCTTTCTTTT	-27	True	NA	NA	False	AATAAA	-18	NA	139389808	139445098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139390238_139419556_139419681_139423015_139423115_139444293
transcript_100685.nic	chr3	+	553	3	FSM	ENSG00000248932.7	ENST00000690901.1	538	3	-15	0	6	0	multi-exon	FALSE	canonical	0	0	junction_1	17	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	9	False	NA	75	True	AATAAA	-16	NA	139389790	139444604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139389934_139423015_139423115_139444293
transcript_100688.known	chr3	+	551	3	FSM	ENSG00000248932.7	ENST00000507362.5	551	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCAGCAAGGAGGAGAG	-18	True	NA	NA	False	NA	NA	NA	139389817	139444325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139390238_139423015_139423115_139444293
transcript_100693.nic	chr3	-	499	2	ISM	ENSG00000114113.6	ENST00000232217.6	694	4	21572	0	21572	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGATCTCCGTTTATTTC	NA	False	NA	NA	False	ATTAAA	-41	NA	139454944	139452883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_139453167_139454728
transcript_100697.known	chr3	-	1569	6	FSM	ENSG00000163864.17	ENST00000296202.11	1569	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.78567765543682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGACAGGATGCTAATT	4	True	NA	NA	False	NA	NA	NA	139677946	139560581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_100698.known	chr3	-	794	5	FSM	ENSG00000163864.17	ENST00000512391.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.3166247903554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTGGAAGGATGCGCAC	19	False	NA	NA	False	NA	NA	NA	139678005	139561332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139561393_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_100699.nic	chr3	-	1931	5	NIC	ENSG00000163864.17	novel	2454	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	1.80277563773199	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	7	True	NA	NA	False	AATAAA	-17	NA	139678017	139560190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139677704
transcript_100700.known	chr3	-	1863	5	FSM	ENSG00000163864.17	ENST00000339837.9	1863	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.08220700148449	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	-19	True	NA	NA	False	AATAAA	-17	NA	139677998	139560190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139637962_139638063_139677704
transcript_100701.known	chr3	-	449	3	FSM	ENSG00000163864.17	ENST00000509737.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	196	False	NA	-5	True	AATAAA	-19	NA	139677828	139634359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139634585_139637962_139638063_139677704
transcript_100702.known	chr3	-	688	3	FSM	ENSG00000163864.17	ENST00000511003.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	20	False	NA	-5	True	AATAAA	-19	NA	139678004	139634359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139634648_139637962_139638063_139677704
transcript_100708.known	chr3	+	1163	8	FSM	ENSG00000114120.14	ENST00000502594.5	1163	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	114.192640672127	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGACCAAAAGATTACAGT	59	False	NA	NA	False	NA	NA	NA	140941894	140976483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140966999_140967037_140970926_140970994_140973715_140974006_140976259
transcript_100709.known	chr3	+	5697	7	FSM	ENSG00000114120.14	ENST00000324194.12	5697	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	72.6605502012994	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGACTTGAGTGCTCT	0	True	NA	17	True	AATAAA	-28	NA	140941835	140980995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976259
transcript_100715.known	chr3	+	3537	4	FSM	ENSG00000114120.14	ENST00000507429.5	3537	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	38.724095283887	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTCTTGCATTTATG	51	False	NA	NA	False	AATAAA	-22	NA	140941886	140966211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126
transcript_100720.known	chr3	+	738	3	FSM	ENSG00000114120.14	ENST00000515813.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTTAGTGATCATTG	32	True	NA	NA	False	AATATA	-25	NA	140941867	140963471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_140942096_140956526_140956692_140963126
transcript_100723.known	chr3	+	4638	7	FSM	ENSG00000114120.14	ENST00000446041.6	4638	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	113.404389489806	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATATGGCTTTTTCTG	-6	True	NA	-16	True	ATTAAA	-10	NA	140941829	140979933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976262
transcript_100726.known	chr3	+	3160	8	FSM	ENSG00000155893.13	ENST00000393010.6	3160	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	104.182336236396	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAATGGTTTGTACCTA	28	True	NA	25	True	AATAAA	-25	NA	141231860	141294644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_100728.known	chr3	+	2066	7	FSM	ENSG00000155893.13	ENST00000502783.5	2066	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	101.914043302296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTGAAGTGATTTATC	7	True	NA	NA	False	NA	NA	NA	141231839	141293605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141231912_141260122_141260255_141262242_141262341_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_10073.known	chr1	-	872	5	FSM	ENSG00000143612.21	ENST00000368516.1	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_4	130.417598505723	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAGCACTTTGGGA	1	True	NA	78	True	NA	NA	NA	154220628	154212132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_100730.known	chr3	+	3302	6	FSM	ENSG00000155893.13	ENST00000286353.9	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	21.9872690436989	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGTATCTGTTGGTAA	-8	True	NA	NA	False	AATAAA	-31	NA	141231824	141294924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_100735.known	chr3	+	479	5	FSM	ENSG00000155893.13	ENST00000505502.1	479	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	14.1664215665072	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCACCTGGTTTTGAT	49	True	NA	8	True	ATTAAA	-20	NA	141231881	141236389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141235397_141235555_141236271
transcript_100744.known	chr3	+	590	4	FSM	ENSG00000177311.12	ENST00000504673.5	590	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.7044966667418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTCGTTGTCAAGAGACA	5	True	NA	NA	False	NA	NA	NA	141402369	141442670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141402450_141403926_141404032_141438242_141438366_141442388
transcript_100748.known	chr3	+	644	3	FSM	ENSG00000177311.12	ENST00000510338.5	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	4	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAATGAAAAAAGGCA	-16	True	NA	NA	False	NA	NA	NA	141402348	141442826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141402450_141403926_141404032_141442388
transcript_100751.known	chr3	+	5638	24	FSM	ENSG00000155903.14	ENST00000286364.9	5638	24	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_19	25.6326381027365	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTGAGACTGTAT	-22	True	NA	5	True	AATAAA	-17	NA	141487026	141615344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586753_141607677_141607761_141608488_141608698_141609419_141609524_141609876_141610067_141612282
transcript_100761.known	chr3	+	862	4	FSM	ENSG00000114125.14	ENST00000477393.1	862	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	737.044548630995	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGCGCACACAGCTTAGA	13	True	NA	17	True	ATTAAA	-28	NA	141738318	141745517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141738510_141742643_141742908_141743508_141743557_141745158
transcript_100762.known	chr3	+	782	2	FSM	ENSG00000114125.14	ENST00000480908.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACTCTTAATTTGT	-29	True	NA	24	True	AATAAA	-17	NA	141738276	141745700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141738517_141745158
transcript_100763.known	chr3	+	2669	3	FSM	ENSG00000114125.14	ENST00000273480.4	2669	3	0	0	0	0	multi-exon	FALSE	canonical	3	1269	junction_1	162.5	4263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATGTATGTAATTGTT	-8	True	NA	NA	False	CATAAA	-21	NA	141738297	141747560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141738517_141743508_141743557_141745158
transcript_100767.nnic	chr3	+	1580	7	NIC	ENSG00000069849.11	novel	569	5	NA	NA	-316	18	combination_of_known_splicesites	FALSE	canonical	3	86	junction_1	714.301154198206	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGGGTTCTTTGTAA	570	False	NA	22	True	AATAAA	-18	NA	141877212	141926200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_141877563_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_100769.known	chr3	+	1847	7	FSM	ENSG00000069849.11	ENST00000286371.8	1847	7	0	0	0	0	multi-exon	FALSE	canonical	3	1686	junction_5	167.264677150384	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTTTTGTGTAAGCAT	0	True	NA	44	True	TATAAA	-33	NA	141876642	141926549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141876911_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_100776.known	chr3	-	2360	11	FSM	ENSG00000114126.18	ENST00000486111.5	2360	11	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	123.58644747706	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	513	False	NA	-9	True	AAGAAA	-30	NA	142028665	141951501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_100783.known	chr3	-	1442	10	FSM	ENSG00000114126.18	ENST00000495310.5	1442	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	187.931298190339	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGGAGATAGTGGG	532	False	NA	NA	False	AAGAAA	-6	NA	142028646	141952275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_141993537_141993586_142005440_142005545_142028578
transcript_100790.nic	chr3	-	1225	9	NIC	ENSG00000114126.18	novel	1442	10	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	190.680852473446	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCATGTGTGTTTGTAGT	496	False	NA	-23	True	AATAAA	-32	NA	142028682	141952480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142005440_142005545_142028578
transcript_100795.known	chr3	-	1403	8	FSM	ENSG00000114126.18	ENST00000477292.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	216.656410013643	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCCTTGACGATCGT	-1	True	NA	NA	False	NA	NA	NA	142028626	141952142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142028578
transcript_1008.known	chr1	+	2689	7	FSM	ENSG00000157870.17	ENST00000378427.6	2689	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	89.6519504652421	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTTTTTGTGCTTTCT	-10	True	NA	14	True	AATAAA	-14	NA	2586797	2591463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_100801.nic	chr3	-	628	6	NIC	ENSG00000114126.18	novel	878	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	369	junction_1	67.1398540361833	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAAGTGGATTGGCCT	496	False	NA	15	True	AATGAA	-23	NA	142028682	141974104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_141974192_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_100810.nic	chr3	-	343	4	ISM	ENSG00000114126.18	ENST00000467667.5	865	9	-85	33773	-17	0	5prime_fragment	FALSE	canonical	3	469	junction_3	31.2018517968975	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGAAAATTTATAGACTC	496	False	NA	-35	True	NA	NA	NA	142028682	141993572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_141993586_141995019_141995142_142005440_142005545_142028578
transcript_100815.known	chr3	-	256	2	FSM	ENSG00000114126.18	ENST00000493204.1	256	2	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAAGTGGATTGGCCT	3732	False	NA	15	True	AATGAA	-23	NA	141978688	141974104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_141974192_141978519
transcript_100816.known	chr3	-	576	1	FSM	ENSG00000233597.3	ENST00000498753.1	576	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCCCCCTTTGTCTGTA	22	False	NA	NA	False	AAGAAA	-4	NA	142044198	142043622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142043600_142044200
transcript_100817.known	chr3	-	9815	16	FSM	ENSG00000175066.16	ENST00000392993.7	9815	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	7.2467617289073	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTTATTTGCTTTG	4	True	NA	-2	True	ATTAAA	-18	NA	142225585	142157526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_100824.nic	chr3	-	1139	10	ISM	ENSG00000175066.16	ENST00000480757.5	4479	17	-77	21732	-33	525	5prime_fragment	FALSE	canonical	3	23	junction_1	5.16397779494322	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTGGTATTTAGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	142225625	142185640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_142185794_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_100827.nnic	chr3	-	1004	5	NNC	ENSG00000175066.16	novel	568	4	NA	NA	-33	-2320	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.7139389695622	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATAGAATTTTCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	142225625	142201176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_142201600_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_100828.known	chr3	-	744	8	FSM	ENSG00000175066.16	ENST00000460544.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	4.29047354790892	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAATGGTTCTTGAATT	173	False	NA	NA	False	AATAAA	-18	NA	142225416	142186165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_100829.known	chr3	-	10143	42	FSM	ENSG00000114127.11	ENST00000264951.8	10143	42	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.87022945029165	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTTCTTTTATTAC	6	False	NA	1	True	ATTAAA	-22	NA	142448062	142306606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142311814_142312597_142312759_142313135_142313175_142318591_142318695_142318789_142318904_142329433_142329616_142332374_142332532_142332966_142333090_142335447_142335510_142347233_142347343_142355400_142355497_142356911_142357120_142359861_142359932_142365046_142365180_142365309_142365367_142370484_142370621_142371238_142371329_142375797_142375945_142376478_142376595_142380081_142380181_142383299_142383414_142384522_142384686_142397328_142397461_142400443_142400548_142403673_142403773_142403868_142403990_142404906_142405077_142412543_142412664_142414134_142414292_142417139_142417230_142418503_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_100832.known	chr3	-	2075	12	FSM	ENSG00000114127.11	ENST00000463916.5	2075	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	2.94859540731397	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGTTATGTAATTTCT	4	True	NA	NA	False	AATAAA	-41	NA	142448010	142417840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_100835.known	chr3	-	669	3	FSM	ENSG00000114127.11	ENST00000470537.1	669	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGGGATTTTCAG	41	False	NA	NA	False	CATAAA	-11	NA	142448027	142426563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142426842_142432660_142432894_142447869
transcript_100836.known	chr3	-	420	3	FSM	ENSG00000114127.11	ENST00000472625.1	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTAACTTTCAGTAACCA	NA	False	NA	0	True	NA	NA	NA	142375991	142370484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142370621_142371238_142371329_142375797
transcript_100839.nnic	chr3	-	977	4	NNC	ENSG00000175054.16	novel	4678	7	NA	NA	-133	-3765	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	18.3726850393609	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAACGATTATATCATCC	NA	False	NA	NA	False	ATTAAA	-21	NA	142578866	142564103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_142564627_142566120_142566262_142568062_142568155_142578645
transcript_100840.nic	chr3	-	1824	3	ISM	ENSG00000175054.16	ENST00000507148.1	724	6	-142	4412	-133	-4412	5prime_fragment	FALSE	canonical	3	37	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAGTACATTGTATGT	NA	False	NA	NA	False	AAAAAG	-5	NA	142578866	142564750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_142566262_142568062_142568155_142578645
transcript_100845.known	chr3	+	3700	16	FSM	ENSG00000120756.13	ENST00000457734.7	3700	16	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_14	48.2505497953708	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTATATTTATTTCAT	-23	True	NA	18	True	AATAAA	-20	NA	142596392	142713664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952_142698068_142703867_142704002_142704462_142704587_142711500_142711626_142711871
transcript_100852.nic	chr3	+	1704	12	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-6	15423	-6	-197	5prime_fragment	FALSE	canonical	3	324	junction_11	39.0007416755075	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCTAGTCAGACACTTT	-29	True	NA	9	True	AATAAA	-18	NA	142596386	142698241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952
transcript_100853.nic	chr3	+	1901	12	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-6	15226	-6	0	5prime_fragment	FALSE	canonical	3	324	junction_11	39.0007416755075	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTATAA	-29	True	NA	NA	False	NA	NA	NA	142596386	142698438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952
transcript_100856.nic	chr3	+	1232	2	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-6	48354	-6	-4109	5prime_fragment	FALSE	canonical	3	398	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAAACTGTGAAACTC	-29	True	NA	NA	False	AAAAAG	-20	NA	142596386	142665310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_142596510_142664201
transcript_100859.known	chr3	+	4324	12	FSM	ENSG00000144935.16	ENST00000273482.10	4324	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	29.3702497477964	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	131	False	NA	NA	False	AATAAA	-21	NA	142724168	142807888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142724732_142736378_142736534_142748257_142748461_142777631_142777764_142780833_142781030_142784703_142785041_142791018_142791159_142792823_142792968_142802168_142802345_142803976_142804179_142804435_142804631_142806007
transcript_100863.nic	chr3	+	3815	11	NIC	ENSG00000144935.16	novel	4324	12	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_6	19.9371512508683	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	-20	True	NA	NA	False	AATAAA	-21	NA	142724522	142807888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_142724732_142748257_142748461_142777631_142777764_142780833_142781030_142784703_142785041_142791018_142791159_142792823_142792968_142802168_142802345_142803976_142804179_142804435_142804631_142806007
transcript_100882.known	chr3	-	1896	9	FSM	ENSG00000163710.9	ENST00000295992.8	1896	9	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_6	9.23309265630969	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAACAACCACTAAAC	-3	True	NA	NA	False	AATAAA	-15	NA	142889083	142817873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142818466_142820877_142821046_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843049_142848216_142848473_142887668_142887778_142888813
transcript_100886.known	chr3	-	704	4	FSM	ENSG00000163710.9	ENST00000495732.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.3255808712151	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCGAGAAACCAGTGAG	124	False	NA	-94	True	AAAAAG	-23	NA	142889061	142846651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142846743_142848216_142848473_142887668_142887778_142888813
transcript_100887.known	chr3	-	666	2	FSM	ENSG00000163710.9	ENST00000483454.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCACTTAATGTTCC	258	False	NA	NA	False	AATAAA	-1	NA	142888927	142887225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142887778_142888813
transcript_100889.known	chr3	-	633	1	FSM	ENSG00000240950.1	ENST00000489462.1	633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAAGGGGCTCAATAAAG	NA	False	NA	NA	False	NA	NA	NA	142827728	142827095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142827100_142827700
transcript_100891.known	chr3	+	571	6	FSM	ENSG00000163714.18	ENST00000465175.2	571	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	351.263206157434	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGATTTGCAGATCAAA	630	False	NA	NA	False	AAAAAG	-22	NA	143002227	143016887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_143002362_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
transcript_100893.known	chr3	+	377	3	FSM	ENSG00000241570.8	ENST00000608686.5	377	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCCCTTGAGCCTT	NA	False	NA	NA	False	AAGAAA	-45	NA	142962954	142964810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142963095_142964464_142964637_142964745
transcript_100894.known	chr3	+	280	3	FSM	ENSG00000241570.8	ENST00000608349.5	280	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCCCTTGAGCCTTAA	99	False	NA	NA	False	AATGAA	-28	NA	142964057	142964812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142964099_142964464_142964637_142964745
transcript_100896.known	chr3	+	438	3	FSM	ENSG00000241570.8	ENST00000607937.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCCCTTGAGCCTT	171	False	NA	NA	False	AAGAAA	-45	NA	142964129	142964810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142964331_142964464_142964637_142964745
transcript_100899.known	chr3	+	521	2	FSM	ENSG00000241570.8	ENST00000594095.1	521	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCGGGCGCGGTGGCTC	NA	False	NA	NA	False	AAGAAA	-8	NA	142962953	142964844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142963095_142964464
transcript_1009.nnic	chr1	+	2484	6	NIC	ENSG00000157870.17	novel	2689	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	171.915560668603	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTTTTTGTGCTTTCT	-10	True	NA	14	True	AATAAA	-14	NA	2586797	2591463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_2586949_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_100900.known	chr3	+	610	2	FSM	ENSG00000241570.8	ENST00000478823.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGACCATCCTGGCCA	201	False	NA	NA	False	NA	NA	NA	142964159	142964903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142964331_142964464
transcript_100901.known	chr3	-	561	1	FSM	ENSG00000268129.1	ENST00000597953.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	336	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTTTCATTTTTAAT	-15	True	NA	0	True	TTTAAA	-20	NA	143001467	143000906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_143000900_143001500
transcript_100902.known	chr3	+	3491	28	FSM	ENSG00000163714.18	ENST00000493598.6	3491	28	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_9	115.745036957301	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	23	True	NA	21	True	AATAAA	-21	NA	143001620	143056846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_100908.nnic	chr3	+	503	3	Antisense	novelGene_ENSG00000181804.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCTGAGATGTGATGGTA	NA	False	NA	-40	True	AATAAA	-16	NA	143797835	143812887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_143798087_143810930_143811009_143812713
transcript_100912.known	chr3	-	712	2	FSM	ENSG00000181804.15	ENST00000498717.2	712	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTTATGCAGTA	-9	True	NA	NA	False	AATAAA	-16	NA	143848469	143847593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_143847984_143848147
transcript_100913.known	chr3	-	3564	16	FSM	ENSG00000181804.15	ENST00000316549.11	3564	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	4.30297055016131	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTTTGGCTAATGC	-8	True	NA	NA	False	AATAAA	-17	NA	143848468	143265221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_143266930_143268874_143268981_143363483_143363564_143382059_143382115_143467036_143467191_143493652_143493765_143495334_143495449_143552361_143552451_143574087_143574194_143578584_143578724_143652254_143652361_143693191_143693308_143795000_143795078_143796825_143796904_143832018_143832222_143848147
transcript_100914.known	chr3	-	1107	1	FSM	ENSG00000243759.1	ENST00000460666.1	1107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCCCTTCTGATAAATA	NA	False	NA	NA	False	AGTAAA	-28	NA	143518229	143517122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_143517100_143518200
transcript_100915.known	chr3	-	404	1	FSM	ENSG00000235110.5	ENST00000477300.1	404	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTCTGCAATGCTGTAA	NA	False	NA	NA	False	GATAAA	-29	NA	143856142	143855738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_143855700_143856100
transcript_100916.known	chr3	-	483	1	FSM	ENSG00000239797.1	ENST00000463605.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGTGTTAAAAAACCTAAT	39	False	NA	NA	False	NA	NA	NA	145824739	145824256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_145824300_145824700
transcript_100917.known	chr3	-	3749	20	FSM	ENSG00000152952.12	ENST00000282903.10	3749	20	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	58.5808625023868	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-1	True	NA	-16	True	AATAAA	-14	NA	146161184	146069439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_100920.known	chr3	-	3665	19	FSM	ENSG00000152952.12	ENST00000360060.7	3665	19	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	32.9734273860065	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTGTTGTTCTATT	2552	False	NA	-20	True	AATAAA	-10	NA	146161167	146069443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_100926.known	chr3	-	3233	9	FSM	ENSG00000114698.15	ENST00000354952.7	3233	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.34477204006491	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTATTTTTTGACT	-14	True	NA	56	True	AATAAA	-23	NA	146251105	146192334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146250959
transcript_10094.known	chr1	+	3411	25	FSM	ENSG00000143569.19	ENST00000343815.10	3411	25	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	264.994886612092	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	NA	False	NA	27	True	AATAAA	-23	NA	154220178	154263505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154220245_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_10095.known	chr1	+	3451	25	FSM	ENSG00000143569.19	ENST00000613315.4	3451	25	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	294.636496263711	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	543	False	NA	27	True	AATAAA	-23	NA	154220848	154263505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234739_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_100955.nnic	chr3	-	912	4	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4835	0	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_3	1343.81769596921	389	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTGTTTAGTTTA	NA	False	NA	45	True	AATAAA	-27	NA	146411742	146391362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_146391563_146395759_146395922_146401359_146401560_146411392
transcript_10096.known	chr1	+	3864	26	FSM	ENSG00000143569.19	ENST00000361546.6	3864	26	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_25	257.765549288496	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGCCTATTCTTGCTC	3334	False	NA	13	True	TATAAA	-20	NA	154225081	154270853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
transcript_100960.nnic	chr3	-	855	4	NNC	ENSG00000241358.1	novel	705	5	NA	NA	4835	-57	at_least_one_novel_splicesite	FALSE	canonical	3	160	junction_3	1343.81769596921	327	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCATATATATTCTTTC	NA	False	NA	-12	True	AATAAA	-18	NA	146411742	146391419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_146391563_146395759_146395922_146401359_146401560_146411392
transcript_100974.known	chr3	-	1443	8	FSM	ENSG00000188313.13	ENST00000487389.5	1443	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	141.232186884736	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACTTCCTTTGAAAA	-6	True	NA	19	True	AAAAAG	-25	NA	146544737	146515816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146544466
transcript_100983.known	chr3	-	1976	9	FSM	ENSG00000188313.13	ENST00000342435.9	1976	9	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_5	39.6579121992069	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	-6	True	NA	-23	True	AATAAA	-18	NA	146544607	146515179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_100984.known	chr3	-	1257	4	FSM	ENSG00000188313.13	ENST00000469266.1	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	44.2743969153982	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTGTTGCACTAAAT	4	True	NA	-4	True	AATAAA	-15	NA	146544727	146527942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146528832_146533469_146533551_146536539_146536566_146544466
transcript_100985.known	chr3	+	1044	3	FSM	ENSG00000152977.10	ENST00000474034.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAATCATTTAAATTA	31	False	NA	NA	False	NA	NA	NA	147421326	147510293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_147421560_147507940_147508053_147509594
transcript_100986.known	chr3	+	1156	3	FSM	ENSG00000239922.2	ENST00000662690.1	1156	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAGTATGTTCTTGTT	45	False	NA	NA	False	ATTAAA	-22	NA	147940048	147942004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_147940117_147940563_147940620_147940972
transcript_100987.known	chr3	+	2569	2	FSM	ENSG00000239922.2	ENST00000467198.1	2569	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	0	True	NA	NA	False	AGTAAA	-11	NA	147940003	147943014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_147940117_147940558
transcript_100988.known	chr3	+	1890	7	FSM	ENSG00000163754.18	ENST00000296048.10	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_5	27.4696802553895	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTTGTTTAATTAAAT	NA	False	NA	9	True	AATAAA	-16	NA	148991451	149027632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026759
transcript_100989.known	chr3	+	1563	6	FSM	ENSG00000163754.18	ENST00000484197.5	1563	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	92.5410179325903	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGTTGTTTAATTAAA	21	False	NA	8	True	AATAAA	-15	NA	148991557	149027631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149026759
transcript_100990.known	chr3	+	2745	16	FSM	ENSG00000163755.9	ENST00000460120.5	2745	16	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	76.7163317394384	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACAAATGCTTTCAGGCT	-22	True	NA	NA	False	NA	NA	NA	149129637	149172361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149129941_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_100993.known	chr3	+	1894	7	FSM	ENSG00000163755.9	ENST00000486530.1	1894	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	28.3867144198753	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAAAGTTGTATTTT	31	True	NA	NA	False	NA	NA	NA	149129690	149154109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
transcript_100998.known	chr3	+	556	2	FSM	ENSG00000163755.9	ENST00000494327.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAGTAGAACTCAGACT	-21	True	NA	NA	False	TTTAAA	-4	NA	149129638	149130451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149129941_149130197
transcript_101000.known	chr3	-	907	5	FSM	ENSG00000163762.7	ENST00000470080.5	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	6.04152298679729	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATACTTCTGCCC	191	False	NA	NA	False	NA	NA	NA	149333482	149321276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205
transcript_101001.known	chr3	-	3727	6	FSM	ENSG00000163762.7	ENST00000296059.7	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	8.07465169527454	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTAATTCTTTCTG	-5	True	NA	NA	False	AATAAA	-18	NA	149333636	149318497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205_149333400_149333512
transcript_101002.known	chr3	-	1555	5	FSM	ENSG00000169908.12	ENST00000305366.8	1555	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.82915619758885	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTAGTTTC	-2	True	NA	0	True	AATAAA	-14	NA	149377649	149369021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149369881_149371686_149371868_149375442_149375589_149375679_149375770_149377370
transcript_101006.known	chr3	-	3694	5	FSM	ENSG00000114744.9	ENST00000473414.6	3694	5	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	41.5030119388943	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTAGACTGAGGATCT	-17	True	NA	-7	True	AATAAA	-21	NA	149752489	149738471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149741719_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_101007.known	chr3	-	589	2	FSM	ENSG00000114744.9	ENST00000490008.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTCTCTGGGATTA	-17	True	NA	NA	False	AAAAAG	-21	NA	149752489	149751810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149752288_149752377
transcript_101009.known	chr3	+	2866	11	FSM	ENSG00000082996.20	ENST00000344229.7	2866	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	131.008434842952	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGATCCAGTAAATGT	48	False	NA	3	True	AATAAA	-12	NA	149812769	149962122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149813354_149813924_149814027_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_10101.known	chr1	+	914	7	FSM	ENSG00000143575.15	ENST00000457918.6	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	216.725633001729	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGCTTGGATATGTG	1801	False	NA	-62	True	NA	NA	NA	154272588	154275784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273479_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_101013.known	chr3	+	767	9	FSM	ENSG00000082996.20	ENST00000467996.1	767	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	107.342617352103	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTAGACCCTTGGCT	27	True	NA	NA	False	ACTAAA	-34	NA	149813264	149960750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_101021.nnic	chr3	+	370	3	NNC	ENSG00000243944.5	novel	372	3	NA	NA	-122	-110038	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGAGTCCTTTTTAAT	NA	False	NA	NA	False	ATTAAA	-17	NA	150039091	150040746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_150039260_150039786_150039871_150040628
transcript_101022.nic	chr3	+	825	3	NIC	ENSG00000243944.5	novel	557	3	NA	NA	-42	297	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTGCTTTATACATGT	-5	True	NA	NA	False	AATAAA	-14	NA	150097989	150151081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_150098151_150124937_150125031_150150510
transcript_101023.known	chr3	+	557	3	FSM	ENSG00000243944.5	ENST00000489690.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTAAGTGTCTATTCG	37	False	NA	NA	False	AATATA	-27	NA	150098031	150213726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150098151_150124937_150125031_150213381
transcript_101025.known	chr3	-	894	3	FSM	ENSG00000070087.15	ENST00000468323.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	441	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCTTCGCACATAGGC	-1	True	NA	NA	False	AAAAAG	-41	NA	149970898	149965712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149966265_149968357_149968526_149970724
transcript_101027.known	chr3	-	1620	3	FSM	ENSG00000070087.15	ENST00000481767.5	1620	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	457	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAGATGAAATAAATTTA	1080	False	NA	-4	True	ATTAAA	-13	NA	149970715	149964934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149966265_149968357_149968551_149970618
transcript_101028.known	chr3	-	662	3	FSM	ENSG00000070087.15	ENST00000498169.1	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAAAGGAAGGTGTCCA	15	True	NA	NA	False	NA	NA	NA	149970882	149966250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149966587_149968357_149968526_149970724
transcript_101029.known	chr3	-	560	3	FSM	ENSG00000070087.15	ENST00000481275.5	560	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	188.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGGTTATAGTCATG	1394	False	NA	NA	False	NA	NA	NA	149970401	149966267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149966587_149968357_149968551_149970353
transcript_101030.known	chr3	-	911	4	FSM	ENSG00000070087.15	ENST00000423691.2	911	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	487.344733108801	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCAAATACTCTAGGCT	-25	True	NA	-12	True	AATAAA	-7	NA	149970922	149964912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149965348_149966179_149966265_149968357_149968551_149970724
transcript_101032.nnic	chr3	+	642	4	Fusion	ENSG00000243944.5_ENSG00000244541.6	novel	557	3	NA	NA	-42	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGGAATCAACTTTAA	-5	True	NA	NA	False	AATAAA	-19	NA	150097989	150240203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_150098151_150124937_150125031_150238934_150238999_150239879
transcript_101033.nnic	chr3	+	547	3	Fusion	ENSG00000243944.5_ENSG00000244541.6	novel	629	2	NA	NA	-40	0	multi-exon	FALSE	canonical	0	0	junction_1	2	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGGAATCAACTTTAA	-3	True	NA	NA	False	AATAAA	-19	NA	150097991	150240203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_150098151_150238934_150238999_150239879
transcript_101041.known	chr3	+	2083	14	FSM	ENSG00000144895.12	ENST00000273435.9	2083	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	164.783953949679	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTTTATTATAAGT	7	True	NA	13	True	AATGAA	-21	NA	150546793	150584242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562556_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_101046.known	chr3	+	1913	13	FSM	ENSG00000144895.12	ENST00000487799.5	1913	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	169.055135647779	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACCATTTATCCAAGAT	8	False	NA	-49	True	NA	NA	NA	150546684	150584023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150546831_150552355_150552426_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_101049.known	chr3	+	3488	7	NNC	ENSG00000198843.14	novel	819	7	NA	NA	-12	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	451.889612872682	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTACTTTGTGGAATT	NA	False	NA	14	True	AATAAA	-25	NA	150603278	150630445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_150603500_150614572_150614584_150622395_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_101050.known	chr3	+	944	7	FSM	ENSG00000198843.14	ENST00000477889.5	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	446.951681455116	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGAAGGCCTGTACTG	-17	True	NA	NA	False	NA	NA	NA	150603290	150627693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150603500_150618708_150618929_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_101051.known	chr3	+	1010	6	FSM	ENSG00000144895.12	ENST00000474505.5	1010	6	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	46.4224083821596	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTATCACAAATTATTAA	-1	True	NA	-29	True	TTTAAA	-14	NA	150546785	150564899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298
transcript_101053.known	chr3	+	565	3	FSM	ENSG00000144895.12	ENST00000463863.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	38	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTCTAAGTTATTGGTT	1	True	NA	NA	False	AATATA	-45	NA	150546677	150558729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150546831_150552355_150552426_150558387
transcript_10106.known	chr1	+	771	6	FSM	ENSG00000143575.15	ENST00000532105.1	771	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	261.212097729029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCAAACTGACCAATAAAA	33	True	NA	-7	True	NA	NA	NA	154272667	154275839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_101063.known	chr3	-	1596	2	FSM	ENSG00000120742.11	ENST00000490945.1	1596	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATGGAACTAAA	103	False	NA	NA	False	NA	NA	NA	150603228	150565795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_150567107_150602943
transcript_101067.known	chr3	+	3437	6	FSM	ENSG00000198843.14	ENST00000471696.6	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_4	37.2912858453553	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGGAACTCCTACTT	13	True	NA	5	True	AATAAA	-16	NA	150603320	150630436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150603500_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_101073.nnic	chr3	+	640	4	NIC	ENSG00000240137.7	novel	3626	3	NA	NA	-15	-7	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	3.39934634239519	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	67	False	NA	15	True	TATAAA	-27	NA	150703470	150719988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_150703668_150706926_150707172_150707931_150708010_150719868
transcript_101074.nnic	chr3	+	808	4	NIC	ENSG00000240137.7	novel	3626	3	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	3.39934634239519	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	67	False	NA	20	True	AATAAA	-34	NA	150703470	150720156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_150703668_150706926_150707172_150707931_150708010_150719868
transcript_101081.known	chr3	+	671	4	FSM	ENSG00000240137.7	ENST00000475393.2	671	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	12.684198393627	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	-1	True	NA	20	True	AATAAA	-34	NA	150704002	150720156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150704063_150706926_150707172_150707931_150708010_150719868
transcript_101083.nnic	chr3	+	725	3	NIC	ENSG00000240137.7	novel	3626	3	NA	NA	-15	4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAGGTTTAATGGACT	67	False	NA	15	True	AATAAA	-29	NA	150703470	150720151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_150703668_150706926_150707172_150719868
transcript_101084.known	chr3	+	302	3	FSM	ENSG00000240137.7	ENST00000471093.6	539	3	78	159	78	-7	multi-exon	FALSE	canonical	3	8	junction_1	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	25	False	NA	15	True	TATAAA	-27	NA	150703563	150719988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150703668_150707931_150708010_150719868
transcript_101090.known	chr3	-	427	3	FSM	ENSG00000181788.4	ENST00000482706.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	114.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTGCCAGGGGCTGTC	4	True	NA	NA	False	NA	NA	NA	150763431	150742487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_150742699_150762432_150762571_150763353
transcript_101091.known	chr3	-	2311	2	FSM	ENSG00000181788.4	ENST00000312960.4	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGCTTCATTTCCCTA	-23	True	NA	-19	True	AATAAA	-18	NA	150763169	150741124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_150742699_150762432
transcript_101094.known	chr3	-	2087	3	FSM	ENSG00000163646.12	ENST00000327047.6	2087	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTCCCCTTAAATCAG	0	True	NA	NA	False	NA	NA	NA	150972727	150926566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_150928202_150941581_150941762_150972455
transcript_101098.nic	chr3	+	555	2	ISM	ENSG00000152601.18	ENST00000461436.1	1681	3	-99	2776	-99	-437	5prime_fragment	FALSE	canonical	3	19	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTCTCGATTTTGCTC	139	False	NA	NA	False	AAAAAG	-42	NA	152268806	152299673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_152269093_152299404
transcript_10110.known	chr1	+	1109	7	FSM	ENSG00000143575.15	ENST00000328703.12	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_4	39.5281193863586	2870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	-6	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273335_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_101101.known	chr3	+	6309	1	FSM	ENSG00000169860.7	ENST00000305097.6	6309	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGGCTTCTATGTTAT	1	True	NA	25	True	AATAAA	-15	NA	152835130	152841439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_152835100_152841400
transcript_101103.known	chr3	-	2709	4	FSM	ENSG00000243069.9	ENST00000479270.6	2709	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAAAAGTGCCCTTT	0	True	NA	NA	False	AATAAA	-19	NA	154121332	154024414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154026643_154030276_154030380_154108668_154108786_154121071
transcript_101104.known	chr3	-	2730	4	FSM	ENSG00000243069.9	ENST00000480639.6	2730	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAAAAGTGCCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	154121347	154024414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154026643_154030276_154030380_154119685_154119809_154121071
transcript_101105.known	chr3	-	2136	2	FSM	ENSG00000243069.9	ENST00000659466.1	2136	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACATGACTGAAACATTA	4	True	NA	NA	False	NA	NA	NA	154121328	154117929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154119809_154121071
transcript_101107.known	chr3	-	6723	25	FSM	ENSG00000174953.14	ENST00000496811.6	6723	25	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_22	58.9016217235711	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGATTCAGTGAATTT	-14	True	NA	NA	False	AATAAA	-39	NA	154324487	154272545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_101109.nic	chr3	-	1439	10	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-143	24878	-72	2295	5prime_fragment	FALSE	canonical	3	270	junction_7	38.9161808994982	2110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAAGCAATATA	429	False	NA	NA	False	AATAGA	-10	NA	154324559	154301048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_10111.known	chr1	+	1151	7	FSM	ENSG00000143575.15	ENST00000483970.6	1151	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	241.363775704272	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	-26	True	NA	27	True	AATAAA	-16	NA	154272608	154275873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273335_154273599_154273749_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_101115.known	chr3	-	833	3	FSM	ENSG00000174953.14	ENST00000491011.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	9	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGATGTGCTTTGTTC	737	False	NA	NA	False	ATTAAA	-12	NA	154324251	154314650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154315281_154316038_154316164_154324173
transcript_101119.known	chr3	-	3487	24	FSM	ENSG00000174953.14	ENST00000308361.10	3487	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	96.1834455532121	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAACCTCTTGGATTGGTT	13	True	NA	-31	True	AATAAA	-38	NA	154324460	154275667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_10112.known	chr1	+	1284	6	FSM	ENSG00000143575.15	ENST00000531435.5	1284	6	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_3	38.8978148486518	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	-6	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273335_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_101120.known	chr3	+	5593	23	FSM	ENSG00000196549.13	ENST00000460393.6	5593	23	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	21.802124773244	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	-9	True	NA	8	True	AATAAA	-21	NA	155079671	155183704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155079757_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_101121.known	chr3	+	5552	23	FSM	ENSG00000196549.13	ENST00000675418.2	5552	23	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	21.0251718480413	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAACGTTTTTA	8	True	NA	-18	True	AATACA	-2	NA	155079931	155183678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_101123.known	chr3	+	5656	23	FSM	ENSG00000196549.13	ENST00000360490.7	5656	23	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.2626474498408	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	2	True	NA	8	True	AATAAA	-21	NA	155080318	155183704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_101128.known	chr3	+	5744	24	FSM	ENSG00000196549.13	ENST00000615825.2	5744	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	37.8687415674419	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	-22	True	NA	8	True	AATAAA	-21	NA	155079855	155183704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155156979_155157070_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_101130.nic	chr3	+	1005	9	ISM	ENSG00000196549.13	ENST00000360490.7	5656	23	0	45476	0	-10633	5prime_fragment	FALSE	canonical	3	54	junction_1	25.8988416729397	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCAATGTAAAACACATT	2	True	NA	NA	False	AATAAA	-23	NA	155080318	155138228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101
transcript_101132.known	chr3	+	3590	23	FSM	ENSG00000196549.13	ENST00000462745.5	3590	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	27.7308492477241	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTGCTCCCTAAGACTG	-1	True	NA	23	True	AATAAA	-14	NA	155080093	155181584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155080296_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_10115.known	chr1	-	3239	13	FSM	ENSG00000160714.10	ENST00000292211.5	3239	13	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	27.0774352552083	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGGCTCTAATAAAATTA	24	True	NA	NA	False	AATAAA	-13	NA	154558662	154548576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558226
transcript_101157.nnic	chr3	-	655	3	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_2	48.5	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	NA	False	NA	1	True	ATTAAA	-28	NA	155280517	155250506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155250827_155258618_155258683_155280246
transcript_101159.known	chr3	-	783	3	FSM	ENSG00000240045.2	ENST00000489090.2	783	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGTAAGACTGTGTG	-2	True	NA	NA	False	AATAAA	-17	NA	155293683	155290226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155290847_155290939_155291039_155293619
transcript_101160.known	chr3	-	6417	23	FSM	ENSG00000114805.18	ENST00000460012.7	6417	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	23.4814855852277	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGAACTTTTTTTACA	-15	True	NA	-6	True	ATTAAA	-16	NA	155745071	155479880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155483052_155485355_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155523896_155524005_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586195_155593940_155594185_155596231_155596379_155704145_155704265_155744839
transcript_101164.nic	chr3	-	2474	6	ISM	ENSG00000114805.18	ENST00000460012.7	6417	23	-34	102194	-34	-91333	5prime_fragment	FALSE	canonical	0	0	junction_2	42.0161873567795	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	AAAAAG	-1	NA	155745105	155582074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_155583643_155586064_155586195_155593940_155594185_155596231_155596379_155704145_155704265_155744839
transcript_10117.known	chr1	-	1625	2	FSM	ENSG00000286391.2	ENST00000664303.2	1651	2	26	0	26	0	multi-exon	TRUE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	-7	True	NA	NA	False	NA	NA	NA	154567720	154564854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154566183_154567423
transcript_101173.known	chr3	-	1926	6	FSM	ENSG00000174928.16	ENST00000482061.6	1926	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	29.9599732977184	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAAAGTAGCTTTTTTC	12	True	NA	-11	True	AATAAA	-19	NA	155806266	155762616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155805596_155805724_155806138
transcript_101176.known	chr3	-	3558	5	FSM	ENSG00000169359.16	ENST00000468581.2	3558	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	59.8806103843306	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAACTCTTACATATGA	-5	True	NA	-19	True	AATAAA	-11	NA	155854416	155826532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155853222
transcript_101180.known	chr3	-	499	2	FSM	ENSG00000169359.16	ENST00000460729.1	499	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACAGATCATTTGAGG	1095	False	NA	NA	False	NA	NA	NA	155853362	155844717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155845077_155853222
transcript_101181.known	chr3	-	9266	6	FSM	ENSG00000169359.16	ENST00000643144.2	9266	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	21.1035542030247	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTTTTCATTTTTAT	-16	True	NA	NA	False	AATAAA	-13	NA	155854427	155821023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_101182.known	chr3	-	2404	7	FSM	ENSG00000169359.16	ENST00000359479.7	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	41.8864204990379	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-18	True	NA	-12	True	AATAAA	-18	NA	155854429	155826525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155826820_155828181_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_101183.nnic	chr3	+	975	3	FSM	ENSG00000286585.2	ENST00000692713.1	1489	3	-34	548	-23	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGTGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	155854728	155863191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155855079_155858251_155858333_155862647
transcript_101184.known	chr3	+	852	3	FSM	ENSG00000286585.2	ENST00000653103.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGTGTGA	-29	True	NA	NA	False	AATAAA	-14	NA	155854751	155863191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155854979_155858251_155858333_155862647
transcript_101185.known	chr3	+	8631	16	FSM	ENSG00000163655.16	ENST00000496455.7	8631	16	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_10	107.828547034427	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGACTTATGTGACTT	-5	True	NA	6	True	ATTAAA	-17	NA	155870649	155944020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155870898_155893517_155893700_155897926_155898042_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_101187.known	chr3	+	2024	14	FSM	ENSG00000163655.16	ENST00000295920.7	2024	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	289.131447758351	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACCGTGTGCAGTTTA	-5	True	NA	-3	True	AATAAA	-15	NA	155870649	155937710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155870898_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_10119.known	chr1	-	1514	2	FSM	ENSG00000286391.2	ENST00000666466.2	1528	2	14	0	11	0	multi-exon	FALSE	canonical	3	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	NA	False	NA	NA	False	NA	NA	NA	154567735	154564854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154566183_154567549
transcript_101191.known	chr3	+	1546	12	FSM	ENSG00000169282.18	ENST00000497291.5	1546	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	4.44804720826366	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCAGTATCT	NA	False	NA	NA	False	ATTAAA	-17	NA	156457209	156537241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_156457359_156457452_156457533_156459826_156459872_156463701_156463747_156465642_156465687_156474733_156474821_156514363_156514450_156515099_156515221_156516269_156516365_156523826_156523948_156531408_156531498_156536657
transcript_101195.nnic	chr3	+	952	7	NNC	ENSG00000169282.18	novel	1546	12	NA	NA	-20	1162	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	10.0898739117769	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCCTACAGTTTTCTT	NA	False	NA	NA	False	AATATA	-18	NA	156457189	156475925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_156457359_156457452_156457533_156459826_156459872_156463701_156463747_156465642_156465687_156474733_156474821_156475443
transcript_1012.nnic	chr1	+	623	3	NNC	ENSG00000237058.1	novel	373	2	NA	NA	-3848	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	1	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTGTGGTTTCCATC	NA	False	NA	NA	False	ATTAAA	-16	NA	2628719	2636620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_2628904_2632501_2632676_2636355
transcript_10120.known	chr1	-	1438	2	FSM	ENSG00000286391.2	ENST00000659429.1	1438	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAACACCTCCCAGTAC	NA	False	NA	NA	False	TTTAAA	-37	NA	154567748	154564934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154566183_154567558
transcript_101202.known	chr3	-	508	1	FSM	ENSG00000272990.1	ENST00000609190.1	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGATTTTCTGAATTTTT	2613	False	NA	-7	True	AATAAA	-15	NA	156524247	156523739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156523700_156524200
transcript_101204.known	chr3	-	596	5	FSM	ENSG00000114850.7	ENST00000463503.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	512.491219436977	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGTGGTCAGGGTGGGA	303	False	NA	-95	True	NA	NA	NA	156554845	156543140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156543270_156544307_156544440_156548904_156549004_156553654_156553782_156554736
transcript_101205.known	chr3	-	807	5	FSM	ENSG00000114850.7	ENST00000476217.5	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	496.747106181808	4673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGTACTAGGACGTTT	-17	True	NA	-9	True	ATTAAA	-17	NA	156555125	156543003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156543270_156544293_156544440_156548904_156549004_156553654_156553782_156554956
transcript_101206.known	chr3	-	1039	5	FSM	ENSG00000114850.7	ENST00000467789.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	514.412954249793	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACAACTTCTTTTGA	-1	True	NA	96	True	NA	NA	NA	156555149	156542820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156543270_156544307_156544440_156548865_156549004_156553654_156553782_156554956
transcript_101207.known	chr3	-	873	4	FSM	ENSG00000114850.7	ENST00000467733.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_1	115.557585452256	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGCCAATGCAGTTA	-9	True	NA	NA	False	NA	NA	NA	156555117	156543953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156544440_156548904_156549004_156553654_156553782_156554956
transcript_101208.known	chr3	+	3861	6	FSM	ENSG00000163659.13	ENST00000295924.12	3861	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.49666295470958	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTTTGGTTCC	1	True	NA	26	True	AATAAA	-38	NA	156674589	156706770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_156674797_156677656_156678615_156694019_156694189_156695864_156696026_156703423_156703703_156704683
transcript_101210.known	chr3	-	509	2	FSM	ENSG00000243926.3	ENST00000664429.2	512	2	0	3	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTCTAGGCTCTACC	NA	False	NA	NA	False	AATAAA	-17	NA	156674446	156671861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156672131_156674206
transcript_101212.known	chr3	-	533	3	FSM	ENSG00000240875.6	ENST00000654528.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCAAGTATGAGTAATT	NA	False	NA	NA	False	AATAAA	-12	NA	156751655	156747353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156747564_156751094_156751184_156751421
transcript_101213.known	chr3	-	3215	3	FSM	ENSG00000240875.6	ENST00000488584.2	3215	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGTACAATATTTATTCAA	NA	False	NA	NA	False	NA	NA	NA	156751525	156747392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156750415_156751094_156751184_156751421
transcript_101214.known	chr3	-	566	2	FSM	ENSG00000240875.6	ENST00000473352.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTCTCATTTTAGAATA	9723	False	NA	NA	False	AAAAAG	-35	NA	156817062	156753062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156753453_156816886
transcript_101215.known	chr3	+	621	5	FSM	ENSG00000197980.14	ENST00000477399.5	621	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.6583123951777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGATATGAGGTAAGAA	-6	True	NA	NA	False	NA	NA	NA	156826313	156924625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_156826377_156829285_156829378_156852767_156852983_156920574_156920695_156924494
transcript_101217.known	chr3	+	546	4	FSM	ENSG00000197980.14	ENST00000483177.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAATGGATTTATTATGAT	-9	True	NA	NA	False	AATAAA	-18	NA	156826310	156888469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_156826377_156829285_156829378_156852767_156852983_156888296
transcript_101218.known	chr3	-	2457	13	FSM	ENSG00000163660.12	ENST00000631619.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	85.2519142828411	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	398	False	NA	-7	True	AATAAA	-24	NA	157160363	157147795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157156935_157157084_157158865_157158976_157159404_157159480_157159791
transcript_101220.known	chr3	-	2362	13	FSM	ENSG00000163660.12	ENST00000475298.5	2362	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	83.2686415565107	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	606	False	157160175	-7	True	AATAAA	-24	NA	157160155	157147795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151728_157151931_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_101222.nic	chr3	-	2251	13	NIC	ENSG00000163660.12	novel	2457	13	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	81.1745376060471	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTCAAATACCTTATTT	529	False	NA	-7	True	AATAAA	-24	NA	157160232	157147795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157151916_157151931_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_101226.nic	chr3	-	2294	12	NIC	ENSG00000163660.12	novel	2362	13	NA	NA	-54	56	combination_of_known_junctions	FALSE	canonical	3	51	junction_8	57.3154242001197	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTACTGGTTTTCTGA	529	False	NA	-7	True	AATAAA	-31	NA	157160232	157147738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157157010_157157084_157158865_157158976_157159404_157159480_157159791
transcript_101229.known	chr3	-	1998	11	FSM	ENSG00000163660.12	ENST00000461804.5	1998	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.9843460503903	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACTTATGTCCCTAAT	1	True	NA	NA	False	ATTAAA	-16	NA	157160760	157146507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157146608_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_101230.known	chr3	-	2322	11	FSM	ENSG00000163660.12	ENST00000295926.8	2322	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	39.041132155715	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTGCTTTTGAATGG	-15	True	NA	NA	False	ATTAAA	-29	NA	157160147	157147552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_101241.known	chr3	-	753	3	FSM	ENSG00000163660.12	ENST00000471044.1	753	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	7	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGCAGTTGCATTTA	603	False	NA	NA	False	AAAAAG	-29	NA	157160158	157158664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157158976_157159404_157159480_157159791
transcript_101244.known	chr3	+	2452	3	FSM	ENSG00000243176.7	ENST00000668714.1	2452	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAATAAACATTATAATTA	10	True	NA	NA	False	NA	NA	NA	157175222	157317885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157175390_157239589_157239800_157315810
transcript_101245.known	chr3	+	3537	2	FSM	ENSG00000243176.7	ENST00000667900.1	3537	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCAGTCTTTTTTTTTT	NA	False	NA	NA	False	AATACA	-11	NA	157174200	157177930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157174556_157174748
transcript_101249.known	chr3	-	3044	14	FSM	ENSG00000197415.12	ENST00000392832.6	3044	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	12.0727577334237	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATAAAAGGAGCT	-2	True	NA	NA	False	AATATA	-19	NA	157499554	157260908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157261371_157265525_157265663_157286556_157286675_157313620_157313756_157317061_157317202_157363363_157363762_157364302_157364513_157381155_157381377_157413880_157414091_157428321_157428489_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_10125.known	chr1	-	4080	16	FSM	ENSG00000160710.18	ENST00000681683.1	4080	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	267.901424657155	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTACTTCCCCTCTTTCCC	11	True	NA	NA	False	NA	NA	NA	154627963	154584364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602249_154602384_154602627_154627854
transcript_101253.nic	chr3	-	1953	8	ISM	ENSG00000197415.12	ENST00000392832.6	3044	14	-314	103409	-313	-626	5prime_fragment	FALSE	canonical	3	19	junction_3	12.4408806040441	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAGATTTAACAGGTATA	4345	False	NA	NA	False	AAGAAA	-8	NA	157499868	157364317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_157364513_157381155_157381377_157413880_157414091_157428321_157428489_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_10126.known	chr1	-	6519	15	FSM	ENSG00000160710.18	ENST00000368471.8	6519	15	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_14	153.589517207127	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAAAGTTTTAAGTC	6	True	NA	-13	True	AATAAA	-20	NA	154627968	154582066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154585044_154585216_154585345_154585752_154585866_154586180_154586364_154588124_154588259_154588550_154588674_154589368_154589463_154589756_154589929_154590183_154590410_154596804_154596996_154597122_154597268_154597827_154597977_154598401_154598586_154601040_154602627_154627854
transcript_101264.nic	chr3	-	1612	5	NIC	ENSG00000197415.12	novel	992	4	NA	NA	-313	44	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	17.1664644001029	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATCTCAGCCCACAGT	4345	False	NA	NA	False	AATAAA	-16	NA	157499868	157459474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_101265.nic	chr3	-	1465	5	NIC	ENSG00000197415.12	novel	992	4	NA	NA	-313	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	17.1664644001029	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	4345	False	NA	-10	True	AATGAA	-29	NA	157499868	157459621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211_157495507_157499394
transcript_101273.nnic	chr3	-	858	4	NIC	ENSG00000197415.12	novel	696	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	21.2759645296439	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	-4	True	NA	-10	True	AATGAA	-29	NA	157499556	157459621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_157459927_157460180_157460356_157470313_157470530_157499394
transcript_101274.nic	chr3	-	1719	4	ISM	ENSG00000197415.12	ENST00000494677.5	1714	5	3706	103	-313	0	3prime_fragment	FALSE	canonical	3	34	junction_2	7.11805216802087	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTCCTTGTCTTCTTTT	4345	False	NA	-10	True	AATGAA	-29	NA	157499868	157459621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_157460356_157470313_157470530_157495211_157495507_157499394
transcript_101276.nic	chr3	-	1400	4	ISM	ENSG00000197415.12	ENST00000494677.5	1714	5	3706	422	-313	154	3prime_fragment	FALSE	canonical	3	34	junction_2	7.11805216802087	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTTCTCAGTTTGAA	4345	False	NA	3	True	ATTAAA	-24	NA	157499868	157459940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_157460356_157470313_157470530_157495211_157495507_157499394
transcript_101279.known	chr3	-	992	4	FSM	ENSG00000197415.12	ENST00000537559.5	992	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	17.7451088722749	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTTGTCTTCTTTTA	8707	False	NA	-9	True	AATGAA	-30	NA	157495506	157459620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211
transcript_101281.known	chr3	+	1201	5	FSM	ENSG00000174899.13	ENST00000651325.1	1201	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.48746859276655	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTTGATAAAAGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	157543245	157578885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157543510_157553229_157553341_157571176_157571307_157571954_157572044_157578278
transcript_101283.known	chr3	+	850	4	FSM	ENSG00000174899.13	ENST00000650979.1	850	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.74165738677394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATTAACACATCTTAG	5	True	NA	NA	False	GATAAA	-31	NA	157543376	157578754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157543510_157553229_157553341_157571176_157571307_157578278
transcript_101284.known	chr3	+	883	3	FSM	ENSG00000174899.13	ENST00000468043.6	920	3	32	5	4	-5	multi-exon	FALSE	canonical	3	6	junction_2	1.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGTTGAATTCCTTTT	-28	True	NA	NA	False	AATAAA	-26	NA	157543343	157569912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157543510_157553229_157553341_157569306
transcript_101287.known	chr3	+	1335	11	FSM	ENSG00000174891.14	ENST00000480119.5	1335	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	43.5693699747885	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCAAACATTGTAAAAA	31	False	NA	NA	False	NA	NA	NA	158110128	158544443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158225656_158225734_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_101290.known	chr3	+	1607	10	FSM	ENSG00000174891.14	ENST00000476899.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	34.6435107849388	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	-21	True	NA	-92	True	AATAAA	-3	NA	158110076	158544734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461010_158537091_158537199_158543334_158543488_158544182
transcript_101294.known	chr3	+	2597	10	FSM	ENSG00000174891.14	ENST00000611884.5	2597	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.5132117320231	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	-9	True	NA	NA	False	AATAAA	-16	NA	158110088	158545730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_10130.known	chr1	-	471	3	FSM	ENSG00000160710.18	ENST00000494866.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	283	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAACACCCCCTTTGTG	-1	True	NA	NA	False	NA	NA	NA	154627912	154602077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154602249_154602384_154602627_154627854
transcript_101300.known	chr3	+	1443	9	FSM	ENSG00000174891.14	ENST00000312179.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.3094863637305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTGAAACTTAAATAAAT	8	True	NA	-33	True	NA	NA	NA	158110105	158544793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110198_158122102_158122299_158123865_158123992_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_101304.known	chr3	+	1727	10	FSM	ENSG00000174891.14	ENST00000295930.7	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.4787348752564	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTAGATGCTCCTT	4156	False	NA	9	True	AATAAA	-24	NA	158110051	158544835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_101307.known	chr3	+	2677	9	FSM	ENSG00000174891.14	ENST00000482822.3	2677	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.5508152003951	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	-23	True	NA	NA	False	NA	NA	NA	158110074	158545101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
transcript_101308.known	chr3	+	2746	9	FSM	ENSG00000174891.14	ENST00000683137.1	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	32.7697936368235	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	-12	True	NA	NA	False	NA	NA	NA	158110386	158545101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110605_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
transcript_101311.known	chr3	+	1757	7	FSM	ENSG00000174891.14	ENST00000684683.1	1757	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.2014211299209	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAACCAAGCGAAAAAA	-9	True	NA	NA	False	NA	NA	NA	158110088	158461983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_101315.known	chr3	+	769	7	FSM	ENSG00000174891.14	ENST00000471994.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	19.7961836950683	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAATGAGGAAGAAG	-30	True	NA	NA	False	NA	NA	NA	158110067	158460962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_10132.known	chr1	-	2477	2	FSM	ENSG00000160710.18	ENST00000680472.1	2477	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCGACAGAGTGAGACTC	NA	False	NA	NA	False	NA	NA	NA	154628007	154600203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154602627_154627953
transcript_101324.known	chr3	+	1069	4	FSM	ENSG00000174891.14	ENST00000684156.1	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	22.7596133534821	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATTGTTTAAGCCTT	-9	True	NA	NA	False	TATAAA	-29	NA	158110088	158203695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071
transcript_101325.known	chr3	+	7727	4	FSM	ENSG00000174891.14	ENST00000683394.1	7727	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	26.4112770527204	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAAATTTATTGAAAAA	-9	True	NA	NA	False	NA	NA	NA	158110088	158210341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071
transcript_10133.nic	chr1	-	2270	2	ISM	ENSG00000160710.18	ENST00000368471.8	6519	15	-9	18413	-1	-276	5prime_fragment	FALSE	canonical	3	566	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAATGATTGGTCTTG	-3	True	NA	NA	False	NA	NA	NA	154627977	154600479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_154602627_154627854
transcript_101330.nic	chr3	+	1218	8	NIC	ENSG00000178053.20	novel	1247	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	290.032932683198	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	-4	True	NA	8	True	AATAAA	-18	NA	158571157	158605397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_158571348_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_101332.known	chr3	+	1247	8	FSM	ENSG00000178053.20	ENST00000484955.5	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	294.850013756562	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	-14	True	NA	8	True	AATAAA	-18	NA	158571172	158605397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571392_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_101337.known	chr3	+	1153	7	FSM	ENSG00000178053.20	ENST00000498592.6	1153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	318.595180266257	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTATAATTAGTTATAAGA	28	False	NA	NA	False	NA	NA	NA	158571214	158605546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571348_158572975_158573040_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_101338.known	chr3	+	992	6	FSM	ENSG00000178053.20	ENST00000491767.6	992	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	269.105629818479	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	1	True	NA	8	True	AATAAA	-18	NA	158571162	158605397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571348_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_101340.known	chr3	+	1959	6	FSM	ENSG00000178053.20	ENST00000619577.5	1959	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	267.517027495447	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACTATGTTCATACT	4	True	NA	-11	True	AGTAAA	-3	NA	158571190	158606348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571392_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_101344.known	chr3	+	2168	7	FSM	ENSG00000178053.20	ENST00000355893.11	2168	7	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	56.8782813461245	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	7	True	NA	15	True	AATAAA	-16	NA	158571193	158606456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_101345.known	chr3	+	2222	7	FSM	ENSG00000178053.20	ENST00000359117.9	2222	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	214.181906072593	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	-3	True	NA	15	True	AATAAA	-16	NA	158571183	158606456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571392_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_101346.known	chr3	+	742	6	FSM	ENSG00000178053.20	ENST00000495452.5	742	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	327.580219183027	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTATCACAAAAAAATAA	7	True	NA	NA	False	AATGAA	-4	NA	158571193	158600175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571348_158588859_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013
transcript_101347.known	chr3	+	3453	19	FSM	ENSG00000168827.15	ENST00000264263.9	3453	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	124.635678957254	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTTGCTTTTCTTG	25	True	NA	13	True	AATAAA	-13	NA	158644596	158692569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158650004_158650062_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_101350.known	chr3	+	6478	18	FSM	ENSG00000168827.15	ENST00000486715.6	6478	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	87.149475855386	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGGATTATGGATGT	-45	True	NA	16	True	AATAAA	-30	NA	158644526	158695581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_101361.known	chr3	-	1071	6	FSM	ENSG00000079257.8	ENST00000264265.4	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	9.52050418832953	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTAATTACGTTGCA	-36	True	NA	-1	True	AATAAA	-21	NA	158672648	158666413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_158666745_158667011_158667075_158668995_158669133_158669432_158669611_158670956_158671020_158672349
transcript_101365.known	chr3	+	3470	18	FSM	ENSG00000168827.15	ENST00000478254.5	3470	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	87.6582701080685	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGCTTTTCTTGACT	-44	True	NA	16	True	AATAAA	-16	NA	158644527	158692572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652251_158653313_158653468_158654546_158654632_158658921_158659071_158660882_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_101366.known	chr3	+	1594	16	FSM	ENSG00000118855.21	ENST00000264266.12	1594	16	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	7.33818021643574	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAAAGTGTATTTGTG	-10	True	NA	NA	False	AATATA	-3	NA	158802090	158829116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158802316_158804318_158804372_158805361_158805475_158807039_158807083_158807395_158807464_158809178_158809288_158813964_158814068_158819648_158819748_158820214_158820327_158821596_158821654_158821983_158822141_158823427_158823526_158824123_158824237_158826014_158826063_158827279_158827338_158828978
transcript_101371.known	chr3	-	1713	6	FSM	ENSG00000118849.10	ENST00000237696.10	1713	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.979795897113271	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACTGAGTGTTGGCCT	5	True	NA	NA	False	ATTAAA	-29	NA	158732457	158696891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_158697828_158697907_158697971_158704790_158704928_158710737_158710934_158713796_158713860_158732139
transcript_101372.nic	chr3	-	1057	5	NIC	ENSG00000118849.10	novel	1713	6	NA	NA	229	-216	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.08972473588517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGTGTTGAATGTTCT	-3	True	NA	NA	False	AATAAA	-20	NA	158732213	158697107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_158697828_158697907_158697971_158704790_158704928_158713796_158713860_158732139
transcript_101377.known	chr3	+	1645	7	FSM	ENSG00000151967.18	ENST00000445224.6	1645	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	22.6028513442196	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATGTCTTTTTGCTCA	10	False	NA	16	True	AATAAA	-20	NA	159839860	159897360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_101378.known	chr3	+	765	4	FSM	ENSG00000151967.18	ENST00000472483.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	16.062378404209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGATTGATGTCTACTG	17	False	NA	NA	False	AGTAAA	-6	NA	159840098	159888119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707
transcript_101381.nnic	chr3	-	922	4	NNC	ENSG00000213186.8	novel	576	4	NA	NA	-82	71	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	46.6761895045715	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTAACGGCTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	160449868	160438579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_160439187_160445154_160445248_160448725_160448796_160449716
transcript_101382.nic	chr3	-	1138	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-82	2768	-82	380	multi-exon	FALSE	canonical	3	102	junction_2	11	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATTTCTCCAAAAAGG	NA	False	NA	66	True	NA	NA	NA	160449868	160438270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_101383.nic	chr3	-	1075	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-82	2831	-82	317	multi-exon	FALSE	canonical	3	102	junction_2	11	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAAAGAAGAATGGAGC	NA	False	NA	3	True	NA	NA	NA	160449868	160438333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_101384.nic	chr3	-	829	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-82	3077	-82	71	multi-exon	FALSE	canonical	3	102	junction_2	11	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTAACGGCTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	160449868	160438579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_101386.known	chr3	-	3073	21	FSM	ENSG00000068885.15	ENST00000496589.5	3073	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	24.9651757454259	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACCATTAATTTC	260	False	NA	-3	True	AATAAA	-19	NA	160399273	160258179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
transcript_101390.known	chr3	-	3999	20	FSM	ENSG00000068885.15	ENST00000326448.12	3999	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	27.2146489801646	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCATATCCTAGAATT	-5	True	NA	-9	True	AATAAA	-33	NA	160399225	160256985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_101392.nic	chr3	-	3686	18	NIC	ENSG00000068885.15	novel	4044	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	27.2773782340202	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATTCTCTCATATCCT	-3	True	NA	-15	True	AATAAA	-27	NA	160399223	160256991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160399145
transcript_1014.known	chr1	+	373	2	FSM	ENSG00000237058.1	ENST00000427302.1	373	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTGTGGTTTCCATC	NA	False	NA	NA	False	ATTAAA	-16	NA	2632567	2636620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2632676_2636355
transcript_101416.nnic	chr3	+	738	6	NIC	ENSG00000113810.16	novel	1971	14	NA	NA	0	-60	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	142.041684022684	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAAAATTAAAGGA	-15	True	NA	34	True	AAAAAG	-6	NA	160399637	160416343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_160399698_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250
transcript_101425.known	chr3	-	576	4	FSM	ENSG00000213186.8	ENST00000471155.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.8493004709113	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGTGGTCATTGCCTT	16	True	NA	NA	False	ATTAAA	-27	NA	160449765	160438840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160447731_160447843_160448725_160448796_160449716
transcript_101426.known	chr3	-	577	3	FSM	ENSG00000213186.8	ENST00000494486.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	56	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTAGTTTGTGGTC	219	False	NA	NA	False	ATTAAA	-19	NA	160449613	160438848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449444
transcript_101427.known	chr3	-	603	3	FSM	ENSG00000213186.8	ENST00000496222.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	58	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGACACACACTGGAC	21	True	NA	-46	True	AAGAAA	-30	NA	160449760	160438730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449683
transcript_101428.known	chr3	-	3824	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	11	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACTGTCTTAATGAGA	-5	True	NA	-1	True	AATAAA	-18	NA	160449786	160435502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_101433.known	chr3	-	860	3	FSM	ENSG00000213186.8	ENST00000479460.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	59	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGCGATAAGGAAGCTG	-1	True	NA	34	True	NA	NA	NA	160449725	160438650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449471
transcript_101438.known	chr3	-	548	2	FSM	ENSG00000213186.8	ENST00000471396.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGACAGATCTTACCCA	18	True	NA	-34	True	AAGAAA	-42	NA	160449763	160438718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160449683
transcript_10144.known	chr1	-	1002	5	FSM	ENSG00000163344.6	ENST00000368467.4	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_2	19.5624001594896	6511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGAGCTGCTTGTCTC	4	True	NA	-9	True	AATAAA	-15	NA	154936719	154924739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154925266_154926353_154926484_154929023_154929177_154932351_154932416_154936590
transcript_101440.nnic	chr3	-	757	2	NIC	ENSG00000213186.8	novel	3824	3	NA	NA	-80	71	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTAACGGCTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	160449866	160438579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_160439187_160449716
transcript_101441.known	chr3	-	8952	17	FSM	ENSG00000186432.10	ENST00000334256.9	8952	17	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_11	34.8146318916343	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTTCTCAGATGAACT	-2	True	NA	-16	True	AATAAA	-16	NA	160565571	160495006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160502203_160504957_160505053_160508106_160508270_160509799_160509872_160514076_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_101443.nnic	chr3	+	1742	2	NNC	ENSG00000229320.3	novel	998	3	NA	NA	272	236	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTGTGGATTGAGTC	579	False	NA	NA	False	AATAAA	-32	NA	160565718	160569484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_160566154_160568177
transcript_101445.nic	chr3	+	3009	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	105.445636335612	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	NA	False	NA	35	True	AATAAA	-32	NA	161221251	161252307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_101449.known	chr3	+	3028	16	FSM	ENSG00000169251.13	ENST00000351193.7	3028	16	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	49.8537416404783	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	6	True	NA	35	True	AATAAA	-32	NA	161221310	161252307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_10145.known	chr1	-	3207	11	FSM	ENSG00000163346.17	ENST00000368463.8	3207	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	15.2065775242163	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCCTGTTTTGGGCA	20	True	NA	-24	True	AATAAA	-17	NA	154956099	154944079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
transcript_101458.nic	chr3	+	871	7	ISM	ENSG00000169251.13	ENST00000351193.7	3028	16	-56	16976	-7	0	5prime_fragment	FALSE	canonical	3	330	junction_1	59.2239159649396	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	161221254	161235331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121
transcript_101461.known	chr3	+	600	6	FSM	ENSG00000169251.13	ENST00000473909.5	600	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	175.026398008986	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTATAACTTTTCCTTC	-17	True	NA	NA	False	NA	NA	NA	161221287	161234905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_101463.nic	chr3	+	1152	6	ISM	ENSG00000169251.13	ENST00000351193.7	3028	16	-56	16961	-7	15	intron_retention	FALSE	canonical	3	330	junction_1	64.8678656963523	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTAATTCTTTATCTGC	NA	False	NA	NA	False	NA	NA	NA	161221254	161235346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_101466.known	chr3	-	1640	6	FSM	ENSG00000169255.15	ENST00000652032.1	1640	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	31.6733326317266	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGGGAGGTCAGTGT	-1	True	NA	NA	False	AATAAA	-17	NA	161105384	161085683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161101138_161101234_161103426_161103518_161104318_161104407_161104784_161104896_161105234
transcript_101467.known	chr3	-	584	6	FSM	ENSG00000169255.15	ENST00000460353.2	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	30.2681350598282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATGTGGTACCTCAGC	4	True	NA	NA	False	NA	NA	NA	161105303	161086663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161089943_161090063_161101138_161101234_161103426_161103515_161104318_161104407_161105234
transcript_101469.known	chr3	-	552	6	FSM	ENSG00000169255.15	ENST00000484127.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	29.6647939483827	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATAGAACGCGTGAAC	46	True	NA	NA	False	NA	NA	NA	161105261	161086630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161105234
transcript_101470.known	chr3	-	3256	5	FSM	ENSG00000169255.15	ENST00000651686.1	3256	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	22.9932055181525	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTGTGTATTTACTTTT	-31	True	NA	-27	True	AATAAA	-7	NA	161105338	161083907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161101138_161101234_161103426_161103515_161104318_161104407_161105234
transcript_101473.known	chr3	-	3221	4	FSM	ENSG00000169255.15	ENST00000392779.6	3221	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	29.9592315581618	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTGTTCTATTCCTAC	38	False	NA	-2	True	AATAAA	-32	NA	161105370	161083882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161103426_161103518_161104318_161104407_161105234
transcript_101474.known	chr3	-	880	4	FSM	ENSG00000196542.9	ENST00000497137.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.6999892542435	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAACAGACCTACCAGAA	1525	False	NA	NA	False	AATAGA	-2	NA	161371501	161345774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161346356_161347964_161348104_161359801_161359895_161371434
transcript_101475.known	chr3	-	3103	3	FSM	ENSG00000196542.9	ENST00000359175.9	3094	3	0	-9	0	6	multi-exon	FALSE	canonical	0	0	junction_1	58	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGATTTACTTTTTAT	-2	True	NA	NA	False	AATAAA	-25	NA	161372880	161344791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161346356_161359801_161359895_161371434
transcript_101476.known	chr3	-	679	2	FSM	ENSG00000196542.9	ENST00000497374.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGCATTTAATTA	-1	True	NA	NA	False	AATATA	-3	NA	161371517	161359298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161359895_161371434
transcript_101479.known	chr3	-	471	1	FSM	ENSG00000234851.4	ENST00000471152.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2573	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGCCTAAT	13	False	NA	-68	True	NA	NA	NA	161429597	161429126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161429100_161429600
transcript_101480.known	chr3	+	248	2	FSM	ENSG00000269888.1	ENST00000602890.1	248	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTGTGTTTTAAGGTA	8037	False	NA	NA	False	NA	NA	NA	161429111	161429613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_161429210_161429463
transcript_1015.known	chr1	+	1437	1	FSM	ENSG00000169717.7	ENST00000378404.4	1437	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCCACCTCGGCTCA	0	True	NA	NA	False	AATAAA	-16	NA	3021466	3022903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_3021500_3022900
transcript_10151.known	chr1	-	3144	10	FSM	ENSG00000163346.17	ENST00000368465.5	3144	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	40.3037847072504	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGTTTTGGGCACTCA	-2	True	NA	-20	True	AATAAA	-21	NA	154956121	154944075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951920_154956068
transcript_101516.nnic	chr3	-	2133	6	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	385.271644427669	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAGCTTATCAGA	NA	False	NA	NA	False	AATAAA	-17	NA	164341620	164029059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164029783_164030259_164030697_164072547_164072681_164074387_164074606_164193507_164193677_164341167
transcript_101520.nnic	chr3	-	1952	6	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	243	junction_1	383.328057934715	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAGCTTATCAGA	-1	False	NA	NA	False	AATAAA	-17	NA	164341490	164029059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164193507_164193677_164196618_164196701_164341167
transcript_101541.nnic	chr3	-	1678	5	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_2	402.942613780176	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAGCTTATCAGA	-1	False	NA	NA	False	AATAAA	-17	NA	164341490	164029059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164029783_164030259_164030505_164074387_164074606_164193507_164193677_164341167
transcript_101543.nnic	chr3	-	2000	5	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	243	junction_1	358.78780288633	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAGCTTATCAGA	NA	False	NA	NA	False	AATAAA	-17	NA	164341620	164029059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164193507_164193677_164341167
transcript_101548.nnic	chr3	-	1517	5	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	414.838748792829	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAGCTTATCAGA	NA	False	NA	NA	False	AATAAA	-17	NA	164341492	164029059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164029783_164074387_164074606_164193507_164193677_164196618_164196701_164341167
transcript_101552.nnic	chr3	-	1653	5	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	243	junction_1	358.78780288633	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTCATGCCTGAAAAT	0	True	NA	-4	True	ATTAAA	-19	NA	164341489	164029275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164029783_164030259_164030697_164074387_164074606_164193507_164193677_164341167
transcript_101556.nnic	chr3	-	1168	5	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	44	junction_1	172.061580546036	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATTTTCAGCAGTGAG	0	True	NA	-11	True	AATAAA	-19	NA	164341489	164050784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164051172_164074387_164074606_164075972_164076045_164193507_164193677_164341167
transcript_101557.nnic	chr3	-	1182	5	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	44	junction_1	434.804841279395	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATTTTCAGCAGTGAG	NA	False	NA	-11	True	AATAAA	-19	NA	164341493	164050784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164051172_164074387_164074606_164193507_164193677_164196618_164196701_164341167
transcript_10157.nnic	chr1	-	2782	13	NNC	ENSG00000160691.19	novel	3059	13	NA	NA	-228	0	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	324.652752525252	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	7771	False	NA	-14	True	ATTAAA	-17	NA	154970975	154962297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_101575.nnic	chr3	-	1432	4	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	91	junction_1	433.740321697979	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAGCTTATCAGA	0	True	NA	NA	False	AATAAA	-17	NA	164341489	164029059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164029783_164074387_164074606_164193507_164193677_164341167
transcript_10158.nnic	chr1	-	2934	13	NNC	ENSG00000160691.19	novel	3062	13	NA	NA	-377	0	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	293.329580941908	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-18	True	NA	-14	True	ATTAAA	-17	NA	154971124	154962297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_101585.nnic	chr3	-	2307	4	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	278	junction_2	92.499849849728	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	0	True	NA	-4	True	AATAAA	-33	NA	164341489	164072861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164074606_164075972_164076045_164193507_164193677_164341167
transcript_101586.nnic	chr3	-	2322	4	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	901	junction_3	94.9982455978355	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	NA	False	NA	-4	True	AATAAA	-33	NA	164341494	164072861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164341167
transcript_101587.nnic	chr3	-	2268	4	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	153	junction_3	444.619937574654	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	NA	False	NA	-4	True	AATAAA	-33	NA	164341494	164072861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164074606_164193507_164193677_164196618_164196701_164341221
transcript_101592.nnic	chr3	-	738	4	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_1	466.395397347215	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGGCTTTACAAAGAG	NA	False	NA	NA	False	AATAAA	-21	NA	164341494	164104999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164105160_164193507_164193677_164196618_164196701_164341167
transcript_101593.nnic	chr3	-	1012	4	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	7	junction_1	464.062016928293	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATTTTAATGTTCAAG	NA	False	NA	NA	False	AATAAA	-16	NA	164341613	164169035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164169351_164193507_164193677_164196618_164196701_164341167
transcript_101597.nnic	chr3	-	2235	3	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	405	junction_2	361	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	0	True	NA	-4	True	AATAAA	-33	NA	164341489	164072861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164074606_164193507_164193677_164341167
transcript_101602.nnic	chr3	-	2067	2	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	266	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTCTGTTTGCTTGA	-1	False	NA	-4	True	AATAAA	-33	NA	164341490	164072861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_164074606_164341167
transcript_101603.known	chr3	-	4391	2	FSM	ENSG00000121871.4	ENST00000241274.3	4391	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATTATATATAGAGGA	14	False	NA	NA	False	AATAAA	-18	NA	165196852	165186721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_165190852_165196591
transcript_101607.known	chr3	-	2405	4	FSM	ENSG00000114200.10	ENST00000264381.8	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.29983164553722	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTCTTTGTTTTTTAT	-2	True	NA	NA	False	ATTAAA	-18	NA	165837423	165772903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_165773507_165786144_165786312_165829516_165831042_165837313
transcript_101608.known	chr3	-	702	3	FSM	ENSG00000114200.10	ENST00000479451.5	702	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGTGCTCTGCTTTTA	1	True	NA	NA	False	AATAAA	-22	NA	165837420	165773078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_165773507_165786144_165786312_165837313
transcript_10161.known	chr1	-	3059	13	FSM	ENSG00000160691.19	ENST00000368450.5	3059	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	293.221036743425	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	6	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_101616.nnic	chr3	+	1256	6	Antisense	novelGene_ENSG00000114204.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	6.34350061086148	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTCATCTCATTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	167422692	167474772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_167422992_167433569_167433768_167467077_167467197_167469458_167469641_167471064_167471122_167474371
transcript_101619.nnic	chr3	+	1137	5	Antisense	novelGene_ENSG00000114204.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	7.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTCATCTCATTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	167422692	167474772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_167422992_167433569_167433768_167469458_167469641_167471064_167471122_167474371
transcript_10162.known	chr1	-	3062	13	FSM	ENSG00000160691.19	ENST00000368453.8	3062	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	256.930100200208	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	6	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_101629.known	chr3	-	849	9	FSM	ENSG00000114209.15	ENST00000475915.6	849	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	565.349891660023	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTTCAGACCTTCAAAA	410	False	NA	NA	False	AATAAA	-43	NA	167734510	167684338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734458
transcript_101630.known	chr3	-	1360	9	FSM	ENSG00000114209.15	ENST00000473645.6	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_8	499.640308121753	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTTCTTTACTTGAA	NA	False	NA	-13	True	AATAAA	-15	NA	167734939	167683909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734805
transcript_101634.known	chr3	-	1026	9	FSM	ENSG00000114209.15	ENST00000470131.5	1026	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	611.442147713093	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAATTTTAAAGTT	-15	True	NA	NA	False	NA	NA	NA	167734892	167684255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734213_167734346_167734805
transcript_101639.known	chr3	-	934	8	FSM	ENSG00000114209.15	ENST00000461494.5	934	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	507.66604803407	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGACTGTATAAATT	-3	True	NA	NA	False	NA	NA	NA	167734544	167684241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734431
transcript_101641.known	chr3	-	1276	8	FSM	ENSG00000114209.15	ENST00000497056.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_7	143.072123955232	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAACATTTCTTTACTTG	NA	False	NA	-15	True	AATAAA	-13	NA	167734930	167683911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734805
transcript_101657.known	chr3	-	674	3	FSM	ENSG00000114209.15	ENST00000481136.1	674	3	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_2	224	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTATTTGACCTTTTGA	NA	False	NA	NA	False	NA	NA	NA	167734929	167704557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167704896_167720061_167720274_167734805
transcript_101663.known	chr3	-	716	7	FSM	ENSG00000114209.15	ENST00000487947.6	716	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	537.347807910916	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTACTTTTAAAATTAAAT	1	True	NA	NA	False	TTTAAA	-28	NA	167734482	167687214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734458
transcript_101664.known	chr3	+	1907	9	FSM	ENSG00000163536.13	ENST00000295777.9	1907	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	30.0434581065496	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAGATCTATTTTTTTA	-3	True	NA	17	True	AATAAA	-18	NA	167735722	167825566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_167736136_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_101666.known	chr3	+	1600	9	FSM	ENSG00000163536.13	ENST00000446050.7	1600	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	6.02987354759617	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATCTATTTTTTTATTT	-5	True	NA	20	True	AATAAA	-21	NA	167735720	167825569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_167735824_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_101672.known	chr3	-	4310	16	FSM	ENSG00000173905.9	ENST00000470487.6	4310	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	3.87585116099964	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCAAATCTTTTAAACTA	-1	True	NA	-19	True	AATAAA	-15	NA	168095924	168008688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_168010419_168010742_168010824_168024525_168024595_168024927_168025096_168027727_168027838_168029222_168029303_168029779_168030037_168032519_168032853_168036835_168036995_168040785_168040870_168041391_168041475_168043378_168043530_168044827_168044882_168046949_168047000_168048290_168048366_168095098
transcript_101675.nnic	chr3	-	196	2	Genic_Genomic	ENSG00000213178.3	novel	410	1	NA	NA	165	57	multi-exon	FALSE	canonical	2	99	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	101	False	NA	NA	False	AATAAA	-16	NA	169483915	169483613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_-_169483710_169483815
transcript_101676.known	chr3	-	410	1	FSM	ENSG00000213178.3	ENST00000418623.1	410	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5062	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATTTATCTGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	169484080	169483670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169483700_169484100
transcript_101677.known	chr3	-	1671	2	FSM	ENSG00000184378.3	ENST00000330368.3	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATGTATGTATT	-3	True	NA	-4	True	AATAGA	-19	NA	169769561	169766920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169768351_169769320
transcript_101680.known	chr3	+	843	2	FSM	ENSG00000269889.1	ENST00000602879.1	843	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGTGCAGATTCAAGCTT	169	False	NA	NA	False	AAGAAA	-1	NA	169769648	169772043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169770062_169771613
transcript_101684.known	chr3	+	2833	9	FSM	ENSG00000085274.16	ENST00000356716.8	2833	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	63.5865551826799	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGAATTTTCTAGATA	26	False	NA	0	True	AATAAA	-11	NA	169773426	169787544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_101699.known	chr3	+	4969	8	FSM	ENSG00000085274.16	ENST00000349841.10	4969	8	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_1	30.9278290903985	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCCACCTCAGCCTC	-5	True	NA	NA	False	NA	NA	NA	169773395	169789716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_101703.known	chr3	+	2630	8	FSM	ENSG00000085274.16	ENST00000602751.5	2630	8	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	70.575187869797	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTCCTGTTATGCACT	4	True	NA	-42	True	NA	NA	NA	169773404	169787502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169773463_169774264_169774562_169778883_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_101715.known	chr3	-	3787	9	FSM	ENSG00000171757.17	ENST00000522596.6	3787	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	8.45207075218848	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-1	True	NA	NA	False	ATTAAA	-28	NA	169812690	169793472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_101718.nic	chr3	-	920	6	ISM	ENSG00000171757.17	ENST00000522830.5	1781	11	-92	10633	-38	-135	5prime_fragment	FALSE	canonical	3	14	junction_5	9.02441133814278	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGCAAATTAATTCATCA	NA	False	NA	0	True	AATAAA	-23	NA	169813024	169804105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_101719.known	chr3	-	1781	11	FSM	ENSG00000171757.17	ENST00000522830.5	1781	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	11.081967334368	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-27	True	NA	NA	False	ATTAAA	-28	NA	169812932	169793472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169793839_169795484_169795612_169796213_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_101724.known	chr3	+	508	5	FSM	ENSG00000008952.17	ENST00000487736.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	773.472203766884	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAGAGAA	9	True	NA	65	True	TATAAA	-11	NA	169966813	169982857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169966859_169969286_169969384_169975607_169975717_169976945_169977052_169982706
transcript_10173.known	chr1	-	3472	12	FSM	ENSG00000160691.19	ENST00000368445.9	3472	12	0	0	0	0	multi-exon	TRUE	canonical	3	447	junction_3	209.930881974548	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	4	True	NA	-14	True	ATTAAA	-17	NA	154970741	154962297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_101730.known	chr3	-	500	2	FSM	ENSG00000239219.2	ENST00000487580.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAACTCGATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	169966240	169939352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169939590_169965977
transcript_101731.known	chr3	+	6526	8	FSM	ENSG00000008952.17	ENST00000337002.9	6526	8	0	0	0	0	multi-exon	FALSE	canonical	3	964	junction_4	225.725406597648	6127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTATTTTATGTAT	2	True	NA	8	True	AATAAA	-22	NA	169966806	169998373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593
transcript_101732.known	chr3	+	1430	9	FSM	ENSG00000008952.17	ENST00000480708.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	451.122142551216	3758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTATTTAGATATTTCT	3	True	NA	20	True	AATAAA	-21	NA	169966807	169993831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593_169993102_169993654
transcript_101733.known	chr3	+	525	3	FSM	ENSG00000008952.17	ENST00000497277.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	1450	junction_2	103.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAGAAAA	8407	False	NA	67	True	TATAAA	-13	NA	169975450	169982859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169975717_169976945_169977052_169982706
transcript_101741.known	chr3	+	1962	4	FSM	ENSG00000173890.17	ENST00000355897.10	1962	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	7.1336448530109	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAAAATTGTTCTTA	-2	True	NA	5	True	ATTAAA	-18	NA	170037994	170085392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170038216_170038914_170039044_170079773_170079898_170083904
transcript_10175.known	chr1	-	3481	12	FSM	ENSG00000160691.19	ENST00000448116.7	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_3	137.164798028437	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-2	True	NA	-14	True	ATTAAA	-17	NA	154970747	154962297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_101751.known	chr3	-	420	2	FSM	ENSG00000173889.16	ENST00000497171.1	420	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTATACCACTCCAGAAC	NA	False	NA	NA	False	NA	NA	NA	170136670	170129384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170129553_170136418
transcript_101752.known	chr3	-	772	7	FSM	ENSG00000173889.16	ENST00000475729.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	6.01156293229048	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTAGTCAAACTCAGTCA	-10	True	NA	NA	False	NA	NA	NA	170181745	170136595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181701
transcript_101753.known	chr3	+	4887	18	FSM	ENSG00000163558.13	ENST00000295797.5	4887	18	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_15	79.5801700187152	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGGATCATTTTTC	-6	True	NA	54	True	AATAAA	-15	NA	170222423	170305977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170222771_170235229_170235352_170259968_170260059_170263378_170263430_170267914_170268001_170270420_170270562_170273285_170273341_170275228_170275288_170280226_170280404_170281165_170281264_170281881_170281969_170284460_170284597_170291853_170291942_170293382_170293509_170295910_170295991_170297303_170297394_170298994_170299111_170303039
transcript_101756.known	chr3	+	7155	7	FSM	ENSG00000136603.14	ENST00000259119.9	7155	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.2997412673548	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	24	True	NA	20	True	AATAAA	-21	NA	170357714	170396835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
transcript_101765.known	chr3	+	594	2	FSM	ENSG00000136603.14	ENST00000465590.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAGAGTAAGTTACG	-6	True	NA	NA	False	GGGGCT	-11	NA	170357684	170360213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170357764_170359698
transcript_101768.known	chr3	+	599	2	FSM	ENSG00000136603.14	ENST00000490989.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACCAAAACTAAGTCGC	43	False	NA	NA	False	NA	NA	NA	170358508	170360160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170358646_170359698
transcript_101773.nnic	chr3	+	1114	2	NNC	ENSG00000285051.2	novel	1304	4	NA	NA	350795	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	7889	False	NA	NA	False	NA	NA	NA	170818097	170860993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_170818201_170859982
transcript_101774.known	chr3	+	2758	3	FSM	ENSG00000013297.12	ENST00000064724.8	2758	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	0.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAATTGGCAAACATTTC	3	True	NA	NA	False	AATAAA	-26	NA	170418867	170434691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170419293_170423162_170423328_170432523
transcript_101776.known	chr3	+	998	2	FSM	ENSG00000013297.12	ENST00000486429.1	998	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCAGGCAAGACTGAGC	10	True	NA	NA	False	NA	NA	NA	170418874	170423742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170419293_170423162
transcript_101777.known	chr3	-	10140	8	FSM	ENSG00000013293.6	ENST00000231706.6	10140	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.87139303460597	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCCATCCTACCCCT	-7	True	NA	NA	False	AATAAA	-18	NA	170586075	170459547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170467378_170480288_170481167_170483313_170483523_170486221_170486369_170498666_170498885_170501108_170501346_170526632_170527089_170585910
transcript_101783.known	chr3	-	545	4	FSM	ENSG00000163584.18	ENST00000466674.5	545	4	0	0	0	0	multi-exon	TRUE	canonical	2	20	junction_3	595.288352164077	4847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCTCATTTTTTTGA	-2	True	NA	40	True	AATAAA	-19	NA	170870033	170866263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170866525_170868012_170868135_170868297_170868391_170869964
transcript_101786.known	chr3	-	506	4	FSM	ENSG00000163584.18	ENST00000463836.1	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	563.562675209146	20608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTTGTCTCATTTTT	-1	True	NA	36	True	AATAAA	-15	NA	170870195	170866267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170866525_170868012_170868135_170868297_170868388_170870158
transcript_101787.known	chr3	-	587	4	FSM	ENSG00000163584.18	ENST00000494771.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	605.991749118748	3267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTGTCTCATTTTTT	175	False	NA	37	True	AATAAA	-16	NA	170870208	170866266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170866525_170868012_170868202_170868297_170868388_170870158
transcript_101788.known	chr3	-	5534	5	FSM	ENSG00000163577.8	ENST00000295822.7	5534	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	16.2538456987877	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTTGTACATATACAT	10	True	NA	NA	False	AATAAA	-19	NA	170908637	170888417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170893420_170894291_170894424_170906988_170907094_170907641_170907842_170908542
transcript_101789.known	chr3	-	570	5	FSM	ENSG00000163577.8	ENST00000474096.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	73	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATGAACACTGTTTATG	3	True	NA	-42	True	AATAAA	-11	NA	170908644	170893348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170893420_170894291_170894384_170906988_170907094_170907641_170907842_170908542
transcript_101795.known	chr3	-	750	3	FSM	ENSG00000154310.17	ENST00000465393.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTCTCCTGTTTAAAA	-3	True	NA	-6	True	ATTAAA	-16	NA	171460405	171346933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_171347219_171369619_171369686_171460006
transcript_101799.nic	chr3	-	992	2	ISM	ENSG00000154310.17	ENST00000465393.1	750	3	158	22001	158	-22001	5prime_fragment	FALSE	canonical	3	46	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGTGAACTGTTTTT	4	True	NA	NA	False	AAAACA	-6	NA	171460247	171368934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_171369686_171460006
transcript_101806.known	chr3	-	5855	26	FSM	ENSG00000075651.17	ENST00000356327.9	5855	26	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_16	4.2172977129911	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCTGCTAATTTCTGTA	34	True	NA	NA	False	TATAAA	-14	NA	171810438	171600404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_171603303_171605298_171605417_171612278_171612433_171620385_171620521_171642839_171642890_171644909_171645024_171659212_171659302_171662059_171662171_171674499_171674614_171676714_171676834_171677565_171677695_171687370_171687585_171688675_171688877_171692331_171692443_171699744_171699827_171708754_171708839_171709559_171709710_171713892_171714046_171724695_171724789_171726017_171726077_171733443_171733510_171734864_171734971_171735491_171735638_171737531_171737660_171737891_171738083_171810398
transcript_101807.known	chr3	-	1012	2	FSM	ENSG00000075651.17	ENST00000460926.1	1012	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTCTCTTGGCTTGAG	31	True	NA	NA	False	AATAAA	-29	NA	171810441	171788566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_171789536_171810398
transcript_101809.known	chr3	+	7904	26	FSM	ENSG00000075420.13	ENST00000336824.8	7904	26	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	20.870112601517	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCATGGTTTTGTGATTT	26	False	NA	NA	False	AATAAA	-18	NA	172040553	172401665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172040625_172112451_172112591_172133470_172133547_172226870_172226948_172247532_172247777_172251259_172251542_172285925_172285985_172295362_172295515_172298727_172298788_172307362_172307502_172310827_172310882_172328951_172329077_172330540_172330716_172333088_172333176_172334943_172335083_172337329_172337402_172341112_172341232_172343010_172343117_172344085_172344259_172346326_172346441_172347211_172347362_172352802_172353084_172362632_172362846_172378269_172378437_172380965_172381094_172397163
transcript_101810.known	chr3	+	946	4	FSM	ENSG00000075420.13	ENST00000421757.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	56.1921307262463	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACCTCTTCTTATTCAT	35	True	NA	NA	False	AATAAA	-27	NA	172039627	172187298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172186711
transcript_101811.known	chr3	+	408	4	FSM	ENSG00000075420.13	ENST00000423424.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	58.116740751315	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCTTTTCAATGTCT	27	False	NA	NA	False	NA	NA	NA	172040554	172186834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172040625_172112451_172112591_172133470_172133547_172186711
transcript_101813.nic	chr3	+	1815	3	ISM	ENSG00000075420.13	ENST00000421757.5	946	4	2	52294	2	-51830	5prime_fragment	FALSE	canonical	3	82	junction_1	28.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACTAGAAAAACTAGAT	37	False	NA	NA	False	ATTAAA	-45	NA	172039629	172135004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_172039772_172112451_172112591_172133470
transcript_101814.nic	chr3	+	1767	3	ISM	ENSG00000075420.13	ENST00000423424.5	408	4	-24	51830	-23	-51830	5prime_fragment	FALSE	canonical	3	37	junction_1	51	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACTAGAAAAACTAGAT	3	True	NA	NA	False	ATTAAA	-45	NA	172040530	172135004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_172040625_172112451_172112591_172133470
transcript_101817.nic	chr3	+	2021	2	ISM	ENSG00000075420.13	ENST00000421757.5	946	4	2	72968	2	-72504	5prime_fragment	FALSE	canonical	3	82	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAAGGTATTTAGTCAAAT	37	False	NA	NA	False	ATTAAA	-29	NA	172039629	172114330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_172039772_172112451
transcript_101818.known	chr3	-	1876	5	FSM	ENSG00000121858.11	ENST00000241261.7	1876	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTATCAGTTCTTTT	0	True	NA	NA	False	AATAAA	-25	NA	172523430	172505507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_172506920_172509216_172509322_172511616_172511660_172514860_172514999_172523252
transcript_101819.known	chr3	-	4536	5	FSM	ENSG00000144959.11	ENST00000475381.7	4536	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	3.56195171219375	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTATGCTTAGTTTAT	13	True	NA	NA	False	AATAAA	-18	NA	172711067	172630248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_172634093_172635915_172636088_172645622_172645693_172647885_172648115_172710846
transcript_101821.nnic	chr3	+	440	2	Antisense	novelGene_ENSG00000144959.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAATAAGTATGCAACTT	NA	False	NA	NA	False	CATAAA	-22	NA	172622319	172631718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_172622437_172631395
transcript_101827.known	chr3	+	4136	25	FSM	ENSG00000114346.14	ENST00000392692.8	4136	25	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_18	61.0188950699335	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	-28	True	NA	19	True	AATAAA	-20	NA	172750725	172821474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_101828.known	chr3	+	4087	24	FSM	ENSG00000114346.14	ENST00000232458.9	4087	24	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	104.778982437703	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	NA	False	NA	19	True	AATAAA	-20	NA	172750681	172821474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_101829.nnic	chr3	-	1478	3	NNC	ENSG00000144962.7	novel	2074	11	NA	NA	-19997	-227306	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	0.5	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTGCTCATAATTTATA	NA	False	NA	-12	True	ATTAAA	-22	NA	173161232	173116668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_173117750_173159142_173159286_173160978
transcript_101830.nnic	chr3	-	1209	3	NNC	ENSG00000144962.7	novel	2074	11	NA	NA	-19997	-227575	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	0.5	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATGCCTGTGTGCACT	NA	False	NA	-4	True	AATAAA	-18	NA	173161232	173116937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_173117750_173159142_173159286_173160978
transcript_101832.nnic	chr3	-	1070	2	NNC	ENSG00000144962.7	novel	2074	11	NA	NA	-19997	-227571	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGTGTGCACTTGAT	NA	False	NA	0	True	AATAAA	-22	NA	173161232	173116933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_173117750_173160978
transcript_101835.known	chr3	+	675	3	FSM	ENSG00000177694.16	ENST00000478624.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTTTGTTCATGTTTT	1	True	NA	NA	False	NA	NA	NA	174440977	174459777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_174441033_174458513_174458597_174459240
transcript_101836.known	chr3	-	440	1	FSM	ENSG00000214192.3	ENST00000397758.2	440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTAATCAAAAAAAAAAAAA	5	True	NA	NA	False	AAGAAA	-43	NA	175718670	175718230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_175718200_175718700
transcript_101845.known	chr3	-	2535	17	FSM	ENSG00000177565.18	ENST00000422442.6	2535	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	92.3721244478008	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCATGTTGTGGAAGGG	-6	True	NA	-124	True	NA	NA	NA	177197227	177024854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177079826_177079946_177098465_177098542_177197120
transcript_101847.known	chr3	-	8182	16	FSM	ENSG00000177565.18	ENST00000457928.7	8182	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_15	54.8940798265168	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTTCTTGGTTGTTG	-22	True	NA	-7	True	ATTAAA	-35	NA	177197482	177019343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
transcript_101848.known	chr3	-	7948	16	FSM	ENSG00000177565.18	ENST00000430069.5	7948	16	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_15	69.4439502204636	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAATTACTAATGTTT	-9	True	NA	-18	True	ATTAAA	-24	NA	177196478	177019354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177196339
transcript_101854.known	chr3	-	2454	15	FSM	ENSG00000177565.18	ENST00000352800.10	2454	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_14	64.5093332908708	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTATGCTCTGTTGGTTTT	1	True	NA	-35	True	AGTAAA	-5	NA	177197252	177024765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177197120
transcript_101858.known	chr3	-	559	6	FSM	ENSG00000177565.18	ENST00000431674.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	131.83838591245	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTATAGAGATAAGCTT	4602	False	NA	NA	False	NA	NA	NA	177197192	177051641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177051727_177053772_177053919_177064919_177065023_177086964_177087042_177098465_177098542_177197120
transcript_101859.known	chr3	-	567	6	FSM	ENSG00000177565.18	ENST00000630833.2	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	125.852294377179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGCAGCAGCTGCTGCA	-1	True	NA	NA	False	NA	NA	NA	177197163	177051614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177131362_177131450_177197120
transcript_101860.known	chr3	-	604	6	FSM	ENSG00000177565.18	ENST00000422066.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	125.880896088326	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCCTGATGTAGTACAAA	-4	True	NA	NA	False	AATAGA	-25	NA	177197225	177051670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177160870_177160989_177197120
transcript_101867.nic	chr3	-	610	4	ISM	ENSG00000177565.18	ENST00000352800.10	2454	15	-57	26789	-57	0	5prime_fragment	FALSE	canonical	3	56	junction_3	112.951316946727	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGGAGAAAACACAGCAAAT	4485	False	NA	NA	False	NA	NA	NA	177197309	177051554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_177051727_177053772_177053919_177064919_177065023_177197120
transcript_101868.known	chr3	-	550	4	FSM	ENSG00000177565.18	ENST00000431421.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	126.244031762122	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCTCAGACAAGAATTT	-4	True	NA	NA	False	AAAACA	-40	NA	177197225	177051503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177051727_177053772_177053919_177098465_177098542_177197120
transcript_101870.known	chr3	-	138	2	FSM	ENSG00000177565.18	ENST00000637123.1	138	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGATTACACGTTGAAGAT	5394	False	NA	NA	False	AATAAA	-5	NA	177196400	177195587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177195665_177196339
transcript_101871.known	chr3	-	588	5	FSM	ENSG00000177565.18	ENST00000450267.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	136.632719361067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGATCTGCAAAAAATGG	-4	True	NA	NA	False	NA	NA	NA	177197184	177051570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177051727_177053772_177053919_177064919_177065023_177079826_177079946_177197120
transcript_101881.nnic	chr3	-	691	4	NNC	ENSG00000237978.6	novel	844	8	NA	NA	-13	25	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4.24264068711928	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	178860418	178748962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_178749237_178841544_178841617_178859488_178859624_178860208
transcript_101882.nic	chr3	-	688	4	NIC	ENSG00000237978.6	novel	844	8	NA	NA	-95	25	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	23.5702260395516	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	178860500	178748962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_178749237_178841544_178841617_178859488_178859624_178860293
transcript_101884.nnic	chr3	-	570	4	NNC	ENSG00000237978.6	novel	844	8	NA	NA	-13	25	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	27.1579740694249	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	178860418	178748962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_178749237_178841580_178841617_178859488_178859624_178860293
transcript_101889.nic	chr3	-	522	3	ISM	ENSG00000237978.6	ENST00000425330.1	508	4	-64	674	-64	25	5prime_fragment	FALSE	canonical	2	2	junction_2	6.5	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	178860469	178748962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_178749237_178841544_178841617_178860293
transcript_101892.nnic	chr3	-	619	3	NNC	ENSG00000237978.6	novel	964	8	NA	NA	-13	25	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	23	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	178860418	178748962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_178749237_178859488_178859624_178860208
transcript_101893.nnic	chr3	-	753	3	NIC	ENSG00000237978.6	novel	964	8	NA	NA	-232	25	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	6.5	380	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-4	True	NA	NA	NA	178860637	178748962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_178749237_178859488_178859624_178860293
transcript_101896.known	chr3	-	7246	4	FSM	ENSG00000171121.17	ENST00000485523.5	7246	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.02768199119819	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGTTTGTGCATTT	7793	False	NA	NA	False	AATAAA	-18	NA	179259208	179236690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179243285_179244494_179244694_179250742_179250935_179258947
transcript_101897.known	chr3	-	1228	4	FSM	ENSG00000171121.17	ENST00000349697.2	1228	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.94422221866655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGCCTCATTTTGTA	30	False	NA	NA	False	ATTAAA	-27	NA	179266971	179242770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179243285_179244494_179244694_179250742_179250935_179266648
transcript_101902.known	chr3	+	1730	5	FSM	ENSG00000121864.10	ENST00000484866.5	1730	5	0	0	0	0	multi-exon	TRUE	canonical	3	262	junction_4	9.9373034571759	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCGTGATAGTTTGTAG	3716	False	NA	48	True	TATAAA	-24	NA	179327560	179334612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179327632_179328282_179328352_179329617_179329729_179332988_179333124_179333268
transcript_101903.known	chr3	+	5212	18	FSM	ENSG00000171109.19	ENST00000471841.6	5212	18	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	14.5269109541056	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTAGCATTTATACTA	-6	True	NA	11	True	AATAAA	-22	NA	179347708	179394936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179347811_179348844_179348964_179351899_179352036_179358839_179359003_179362357_179362483_179364296_179364406_179365117_179365226_179367438_179367593_179368035_179368104_179375219_179375342_179377041_179377169_179377343_179377449_179378340_179378444_179378584_179378815_179385568_179385722_179386432_179386630_179390003_179390139_179391980
transcript_101909.known	chr3	-	1173	10	FSM	ENSG00000114450.11	ENST00000674862.1	1173	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	17.4575322453881	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCATACATATTTGTT	-31	True	NA	NA	False	NA	NA	NA	179451470	179401212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179401320_179405189_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143_179426226_179451345
transcript_101923.known	chr3	-	1126	7	FSM	ENSG00000136522.14	ENST00000259038.6	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	461.3595849949	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTAGTCCTTAAAGTA	-3	True	NA	-22	True	AATAAA	-31	NA	179604640	179588454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602738_179604526
transcript_101933.known	chr3	-	673	6	FSM	ENSG00000136522.14	ENST00000392659.2	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	500.04743774966	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGTGTACAGGAGTAA	4	True	NA	-2	True	ATTAAA	-24	NA	179604649	179588830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179604526
transcript_101946.known	chr3	-	1354	7	FSM	ENSG00000136522.14	ENST00000476781.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_1	120.795971235247	4301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTGGAAAGCATTTTA	-1	True	NA	22	True	AATAAA	-40	NA	179604638	179588284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602798_179604526
transcript_101947.known	chr3	+	1750	14	FSM	ENSG00000136518.17	ENST00000450518.6	1750	14	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	214.32787469161	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	NA	False	NA	13	True	AATAAA	-23	NA	179562885	179588407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_101948.known	chr3	+	1854	14	FSM	ENSG00000136518.17	ENST00000429709.7	1854	14	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_4	61.85485970107	4173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	-22	True	NA	13	True	AATAAA	-23	NA	179562925	179588407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179563118_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_101949.known	chr3	+	597	3	FSM	ENSG00000136518.17	ENST00000491202.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	37	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGATGCATAAGAAATG	-25	True	NA	NA	False	NA	NA	NA	179562922	179570391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179563118_179569823_179569901_179570066
transcript_101950.known	chr3	+	1899	14	FSM	ENSG00000136518.17	ENST00000392662.5	1899	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.481781827046	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATATATTTTGGACTGT	-28	True	NA	4	True	AATAAA	-14	NA	179562919	179588398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179563166_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_101951.nic	chr3	+	311	3	ISM	ENSG00000136521.13	ENST00000488002.5	842	4	101	1363	0	647	5prime_fragment	FALSE	canonical	3	820	junction_1	31.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTCCATCCCCTGCCAGC	-10	True	NA	NA	False	NA	NA	NA	179604790	179616055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_179604940_179614970_179615060_179615982
transcript_101953.known	chr3	+	3163	26	FSM	ENSG00000288698.1	ENST00000680408.1	3163	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	218.020791669052	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAATTTGCCAAAAAA	6	True	NA	NA	False	TATAAA	-25	NA	179604806	179784179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179618414_179618522_179639863_179640046_179640733_179640857_179681877_179682004_179690240_179690302_179701007_179701130_179706933_179707077_179708772_179708958_179719939_179720035_179721401_179721590_179730188_179730261_179730615_179730710_179740246_179740373_179742196_179742351_179745042_179745218_179752284_179752374_179754731_179754855_179757051_179757079_179761111_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
transcript_101961.known	chr3	+	824	5	FSM	ENSG00000136521.13	ENST00000468210.5	824	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	425.05433476204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTAGATGTCTGTATT	8	True	NA	NA	False	NA	NA	NA	179604808	179624376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_101962.known	chr3	+	689	5	FSM	ENSG00000136521.13	ENST00000473500.5	689	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	512.986050005261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATAGTATTTTGTACAAA	106	False	NA	NA	False	NA	NA	NA	179604906	179624351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179607757_179607813_179616982_179617045_179618414_179618522_179623919
transcript_101964.known	chr3	+	1054	6	FSM	ENSG00000136521.13	ENST00000359944.10	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	383.39087104416	4544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTTCATGGTTTTTT	10	True	NA	14	True	AATAAA	-32	NA	179604810	179624500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_101965.known	chr3	+	951	5	FSM	ENSG00000136521.13	ENST00000611971.4	951	5	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_4	355.529534638123	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTTTCATGGTTTTT	-14	True	NA	13	True	AATAAA	-31	NA	179604786	179624499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179623919
transcript_101966.known	chr3	+	671	7	FSM	ENSG00000136521.13	ENST00000482604.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	445.707832803309	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATATTCTGTATTT	25	False	NA	-2	True	AATAAA	-3	NA	179604825	179624091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179614970_179615060_179615555_179615616_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_101967.known	chr3	+	8038	21	FSM	ENSG00000058056.10	ENST00000263966.8	8038	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	10.9328633029047	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGCCCTTTATGGCTC	-39	True	NA	14	True	ATTAAA	-15	NA	179653039	179789401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179653394_179681877_179682004_179690240_179690302_179701007_179701130_179706933_179707077_179708772_179708958_179719939_179720035_179721401_179721590_179730188_179730261_179730615_179730710_179740246_179740373_179742196_179742351_179745042_179745218_179752284_179752374_179754731_179754855_179757051_179757079_179761111_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
transcript_101975.known	chr3	-	3848	20	FSM	ENSG00000284862.3	ENST00000476379.6	3848	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.7378540639242	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATGTACATGTGTCTCCT	1	True	NA	NA	False	AATAAA	-15	NA	180679489	180614007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180615078_180616280_180616364_180616515_180616696_180616825_180616967_180619258_180619366_180619810_180619971_180631468_180631593_180641992_180642202_180644119_180644258_180647078_180647244_180648164_180648360_180651400_180651534_180652162_180652267_180654761_180654954_180659451_180659581_180659676_180659770_180660569_180660729_180661860_180662008_180663866_180663987_180679290
transcript_101976.known	chr3	+	2274	13	FSM	ENSG00000163728.11	ENST00000382584.8	2274	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	20.7598704770098	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGGTGTACATTATTT	17	True	NA	12	True	AATAAA	-23	NA	180602210	180617828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629_180610004_180617379
transcript_101979.known	chr3	+	3000	12	FSM	ENSG00000163728.11	ENST00000296015.9	3000	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	18.116245392118	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTCCACCCAGCATAA	-31	True	NA	NA	False	ATTAAA	-20	NA	180602162	180611130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629
transcript_101985.nic	chr3	+	1478	11	ISM	ENSG00000163728.11	ENST00000296015.9	3000	12	-54	2395	-54	-1268	5prime_fragment	FALSE	canonical	3	25	junction_10	17.5057133530742	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAAAAGCAGAAAACAA	NA	False	NA	NA	False	AAGAAA	-33	NA	180602108	180608735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700
transcript_101988.known	chr3	+	4568	10	FSM	ENSG00000163728.11	ENST00000412756.6	4568	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	9.21485649627348	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATATGTTCGAATGTTT	-1	True	NA	6	True	ATTAAA	-19	NA	180602192	180610974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647
transcript_101996.known	chr3	+	3277	18	FSM	ENSG00000114416.18	ENST00000305586.11	3277	18	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_2	235.761535730712	2651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	-2	True	NA	6	True	AATAAA	-16	NA	180912481	180977155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180914651_180914996_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_102.known	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1369	junction_5	2229.6709533023	7612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
transcript_1020.nic	chr1	+	1803	10	NIC	ENSG00000130762.15	novel	2340	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	65.1613382305796	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGATTTTCACAGTGACT	-1	True	NA	40	True	ATTAAA	-16	NA	3471622	3481113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_3471792_3473077_3473231_3473392_3473523_3474707_3474783_3475969_3476063_3477874_3478027_3478423_3478613_3479516_3479591_3479811_3479914_3480447
transcript_102004.known	chr3	+	1989	15	FSM	ENSG00000114416.18	ENST00000468861.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	190.976344832846	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	1	True	NA	16	True	ATTAAA	-16	NA	180912670	180976545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_102005.known	chr3	+	1768	14	FSM	ENSG00000114416.18	ENST00000491062.5	1768	14	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	186.002831307585	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGGGGAGGGATCCT	1	True	NA	-76	True	NA	NA	NA	180912670	180976418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_10201.known	chr1	+	390	3	FSM	ENSG00000173207.13	ENST00000473344.1	390	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1964.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTAACTGCTTTGCTTCTT	447	False	NA	NA	False	AATACA	-15	NA	154975538	154978916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154975609_154977986_154978115_154978724
transcript_102011.known	chr3	+	8343	17	FSM	ENSG00000114416.18	ENST00000357559.9	8343	17	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_15	132.809176429003	1665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTTGATCCTCATTATT	0	True	NA	NA	False	AATAAA	-18	NA	180912669	180982753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_102012.known	chr3	+	2651	16	FSM	ENSG00000114416.18	ENST00000445140.6	2651	16	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_15	92.5955122502645	3718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	2	True	NA	6	True	AATAAA	-16	NA	180912671	180977155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_102013.known	chr3	+	2130	15	FSM	ENSG00000114416.18	ENST00000472339.5	2130	15	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_14	95.8452462279157	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	8	True	NA	24	True	ATTAAA	-24	NA	180912677	180976553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180976121
transcript_102015.known	chr3	+	2276	3	FSM	ENSG00000242808.11	ENST00000642685.1	2276	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACATAGTGAATCCCGT	-9	True	NA	NA	False	NA	NA	NA	181610523	181673402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181610746_181610860_181610930_181671417
transcript_102016.known	chr3	+	3226	3	FSM	ENSG00000242808.11	ENST00000476964.6	3226	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATAAAAATGAGAGAAAAAT	NA	False	NA	NA	False	AATACA	-9	NA	181610333	181742313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181610746_181610860_181610930_181739568
transcript_10202.known	chr1	+	779	3	FSM	ENSG00000173207.13	ENST00000308987.6	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	3587	junction_1	171.5	40369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAATTGTACGGGTTTT	-5	True	NA	30	True	ATTAAA	-23	NA	154974680	154979251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154974805_154977986_154978115_154978724
transcript_102020.known	chr3	+	4085	3	FSM	ENSG00000242808.11	ENST00000600801.7	4085	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTATATATATATATATAT	2777	False	NA	NA	False	NA	NA	NA	181699222	181742884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181699884_181715184_181715293_181739568
transcript_102021.known	chr3	+	2094	3	FSM	ENSG00000242808.11	ENST00000646296.2	2094	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACATTATAATTGTTTT	1464	False	NA	NA	False	AAAAAG	-42	NA	181711101	181741290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181711366_181715184_181715293_181739568
transcript_102026.nic	chr3	+	1630	2	ISM	ENSG00000242808.11	ENST00000646296.2	2094	3	3832	451	3832	-1	3prime_fragment	FALSE	canonical	3	18	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTCCTAGTGTTCTCTT	172	False	NA	20	True	AATAAA	-17	NA	181714933	181740839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_181715293_181739568
transcript_102027.nic	chr3	+	3261	2	ISM	ENSG00000242808.11	ENST00000646296.2	2094	3	3832	-1180	3832	0	3prime_fragment	FALSE	canonical	3	18	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGATTATTTCCTTTTC	172	False	NA	NA	False	AATAAA	-21	NA	181714933	181742470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_181715293_181739568
transcript_102028.known	chr3	+	2920	2	FSM	ENSG00000242808.11	ENST00000647034.2	3006	2	33	53	33	-31	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTTTAAGATATCAGAAA	3	True	NA	NA	False	AATAAA	-40	NA	181727024	181742417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181727096_181739568
transcript_10203.known	chr1	+	912	3	FSM	ENSG00000173207.13	ENST00000368439.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	1897	2690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTAATTGTACGGGT	-8	True	NA	27	True	ATTAAA	-20	NA	154974652	154979248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154974913_154977986_154978115_154978724
transcript_102030.known	chr3	-	610	6	FSM	ENSG00000205981.9	ENST00000479269.5	610	6	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_5	593.691165506107	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGCTACAATTTTAAAAAA	319	False	NA	-54	True	AATAAA	-8	NA	180989518	180984564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180988177_180988230_180989331
transcript_102034.known	chr3	-	769	5	FSM	ENSG00000205981.9	ENST00000491873.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	642.512451241219	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGATGGAAATTAG	17	True	NA	NA	False	GATAAA	-21	NA	180989710	180984277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180989599
transcript_102039.known	chr3	-	324	3	FSM	ENSG00000205981.9	ENST00000646965.1	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	738.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAGCCTTGGTATAAT	170	False	NA	-15	True	TTTAAA	-23	NA	180989667	180984525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180989599
transcript_102040.known	chr3	-	520	6	FSM	ENSG00000205981.9	ENST00000643241.1	520	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	608.201808612898	3350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGCCTCAGAGCTA	13	True	NA	-67	True	NA	NA	NA	180989714	180984577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180986947_180987023_180988022_180988097_180988177_180988230_180989599
transcript_102041.known	chr3	-	828	6	FSM	ENSG00000205981.9	ENST00000486355.1	828	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	584.799658002636	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGATGGAAATTAGCTT	-42	True	NA	NA	False	GATAAA	-24	NA	180989769	180984274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180986997_180987023_180988022_180988097_180988177_180988230_180989599
transcript_102042.known	chr3	-	1133	3	FSM	ENSG00000205981.9	ENST00000485675.2	3748	3	0	2615	0	406	multi-exon	FALSE	canonical	3	1540	junction_1	29	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTATTCAGCTTTAGC	-36	True	NA	NA	False	ATTAAA	-26	NA	180989763	180987179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180988097_180988177_180988230_180989599
transcript_102043.known	chr3	+	2512	1	FSM	ENSG00000181449.4	ENST00000325404.3	2512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1672	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTGAGTCTTTCATT	-1	True	NA	20	True	AATAAA	-24	NA	181711924	181714436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181711900_181714400
transcript_102048.known	chr3	-	699	1	FSM	ENSG00000273261.1	ENST00000608000.1	699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGTGTGTTATTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	182921938	182921239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_182921200_182921900
transcript_102049.known	chr3	-	3147	7	FSM	ENSG00000043093.15	ENST00000632685.1	3147	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_6	36.9207108394312	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATATGGCTGTGTGTGT	4	True	NA	78	True	GATAAA	-40	NA	182980538	182942775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965536_182965754_182980486
transcript_102056.known	chr3	-	659	7	FSM	ENSG00000043093.15	ENST00000492563.1	659	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	103.582495303663	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTGTAGCACTAAAGGA	5402	False	NA	-76	True	AAAAAG	-4	NA	182980520	182945103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965678_182965754_182980486
transcript_102061.known	chr3	-	2454	19	FSM	ENSG00000078070.14	ENST00000265594.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_17	24.7434365907605	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-11	True	NA	0	True	AATAAA	-28	NA	183099496	183015217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_102064.nic	chr3	-	2915	19	NIC	ENSG00000078070.14	novel	2454	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_18	48.3979453191053	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	101	False	NA	0	True	AATAAA	-28	NA	183116079	183015217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183115473
transcript_102066.nic	chr3	-	2357	18	NIC	ENSG00000078070.14	novel	2454	19	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	47.6661544886623	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	2	True	NA	0	True	AATAAA	-28	NA	183099536	183015217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183094558_183094606_183099351
transcript_102068.known	chr3	-	2316	18	FSM	ENSG00000078070.14	ENST00000629669.2	2316	18	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	51.2443768541442	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTTTCTGCCTCAA	3719	False	NA	-2	True	AATAAA	-26	NA	183099577	183015219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_102078.nic	chr3	-	1557	10	ISM	ENSG00000078070.14	ENST00000629669.2	2316	18	-21	29877	-21	-22628	5prime_fragment	FALSE	canonical	3	168	junction_8	14.2863139203959	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCAGTCTTGATGGG	3698	False	NA	NA	False	NA	NA	NA	183099598	183045096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_102079.nic	chr3	-	1356	9	NIC	ENSG00000078070.14	novel	2316	18	NA	NA	-4	-22628	combination_of_known_junctions	FALSE	canonical	3	27	junction_7	56.0879610522615	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCAGTCTTGATGGG	4	True	NA	NA	False	NA	NA	NA	183099534	183045096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183094558_183094606_183099351
transcript_102082.nnic	chr3	-	1006	5	NNC	ENSG00000078070.14	novel	222	2	NA	NA	-21	-6378	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	74.3051142250653	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTGGGATATGT	3698	False	NA	-2	True	AATAAA	-18	NA	183099598	183078804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_183079284_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_102084.nic	chr3	-	802	2	ISM	ENSG00000078070.14	ENST00000486226.1	581	6	-103	21624	-21	-1678	5prime_fragment	FALSE	canonical	3	202	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAAAATAAATAAATAA	3698	False	NA	NA	False	NA	NA	NA	183099598	183094050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_183094606_183099351
transcript_102085.known	chr3	-	3196	6	FSM	ENSG00000078081.8	ENST00000265598.8	3196	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.78885438199983	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGCATGTCATTTAT	-1	True	NA	-15	True	AATAAA	-14	NA	183162734	183122214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183124215_183135716_183135888_183140537_183140596_183152374_183152504_183153681_183154392_183162606
transcript_102086.known	chr3	-	2394	18	FSM	ENSG00000053524.13	ENST00000447025.6	2394	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	27.6144989748722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAACATGATGGTTTGATA	848	False	NA	-3	True	AATAAA	-21	NA	183428085	183228125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183228367_183229665_183229782_183230950_183231018_183276871_183276958_183289119_183289221_183295299_183295478_183296975_183297168_183300004_183300197_183309715_183309836_183310914_183311030_183311647_183311773_183318067_183318218_183323234_183323352_183338799_183338920_183341539_183341631_183379296_183379412_183389695_183389780_183427901
transcript_10209.known	chr1	+	1730	8	FSM	ENSG00000160688.19	ENST00000315144.14	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	124.384197434516	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	10	True	NA	22	True	AATAAA	-18	NA	154983358	154993111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_102090.known	chr3	-	5326	30	FSM	ENSG00000053524.13	ENST00000328913.8	5326	30	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	35.160782390492	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCAAGTTATTTATT	3	True	NA	2	True	ATTAAA	-22	NA	183428619	183178040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183179504_183179576_183179693_183180070_183180160_183192998_183193097_183195221_183195256_183205875_183205955_183206121_183206215_183207607_183207824_183215968_183216095_183219855_183219925_183223345_183223439_183224097_183224191_183228296_183228367_183229665_183229782_183230950_183231018_183276871_183276958_183289119_183289221_183295299_183295478_183296975_183297168_183300004_183300197_183309715_183309836_183310914_183311030_183311647_183311773_183318067_183318218_183323234_183323352_183338799_183338920_183341539_183341631_183379296_183379412_183389695_183389780_183427901
transcript_102091.known	chr3	+	4108	2	FSM	ENSG00000176597.12	ENST00000326505.4	4108	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGAGATGTGTATTTAAA	2	True	NA	9	True	AATAAA	-15	NA	183253252	183273385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183253473_183269497
transcript_102093.known	chr3	+	3368	2	FSM	ENSG00000176597.12	ENST00000460419.1	3368	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACGAAAAAAGAT	25	False	NA	NA	False	NA	NA	NA	183253794	183272426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183254234_183269497
transcript_102103.nnic	chr3	+	1523	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	66.0824400948459	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	-19	True	NA	25	True	AATAAA	-27	NA	183447595	183456013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_183447948_183452077_183452352_183454011_183454094_183455198
transcript_102106.known	chr3	+	1241	4	FSM	ENSG00000240024.6	ENST00000686765.1	1667	4	34	392	2	84	multi-exon	FALSE	canonical	3	123	junction_1	27.8567765543682	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	-12	True	NA	NA	False	NA	NA	NA	183447650	183455625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183447948_183452077_183452513_183454011_183454094_183455198
transcript_102114.known	chr3	+	1490	4	FSM	ENSG00000240024.6	ENST00000471496.6	1491	4	0	1	0	0	multi-exon	FALSE	canonical	3	54	junction_1	59.84981202978	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	-7	True	NA	25	True	AATAAA	-27	NA	183447607	183456013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183447766_183452077_183452513_183454011_183454094_183455198
transcript_102120.nnic	chr3	+	1542	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	75.7818506562679	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	NA	False	NA	25	True	AATAAA	-27	NA	183447584	183456013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_183447795_183452077_183452513_183454011_183454094_183455198
transcript_102135.known	chr3	+	7380	9	FSM	ENSG00000114796.16	ENST00000454652.6	7380	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	42.0027900858979	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTATATGGTTGT	-15	True	NA	5	True	AATAAA	-18	NA	183635622	183684477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183635794_183636220_183636312_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_102137.known	chr3	+	7331	8	FSM	ENSG00000114796.16	ENST00000242810.11	7331	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	24.6328136883321	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	-15	True	NA	13	True	ATTAAA	-17	NA	183635622	183684519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183635794_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_102152.known	chr3	+	389	2	FSM	ENSG00000114796.16	ENST00000481126.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGTCCCCGGGGAGCC	-3	True	NA	NA	False	NA	NA	NA	183635634	183636450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183635794_183636220
transcript_102153.known	chr3	+	1024	5	FSM	ENSG00000163872.16	ENST00000432781.1	1024	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	71.4807666439022	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATACCTTGTCTGTTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	183775990	183793486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183793115
transcript_102179.known	chr3	-	1240	9	FSM	ENSG00000175193.14	ENST00000311101.9	1240	9	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_4	287.433225941261	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-12	True	NA	-4	True	AATAAA	-21	NA	183884888	183829389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_102180.known	chr3	-	1098	8	FSM	ENSG00000175193.14	ENST00000435888.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	434.384293322991	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	21	True	NA	-11	True	AATAAA	-14	NA	183884855	183829396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_102181.known	chr3	-	1534	11	FSM	ENSG00000175193.14	ENST00000638817.1	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	407.258505129113	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTCTCTCTTTAA	-31	True	NA	1	True	AATAAA	-26	NA	183884907	183829384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_102182.known	chr3	-	1545	11	FSM	ENSG00000175193.14	ENST00000639900.1	1545	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	418.051252838692	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTGTAAGCAGATGT	-3	True	NA	-16	True	AATAAA	-9	NA	183884879	183829401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_102183.known	chr3	-	5790	30	FSM	ENSG00000114770.17	ENST00000334444.11	5790	30	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_20	34.7419226448486	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCGTGTATCAAACAAT	21	True	NA	-5	True	AATAAA	-22	NA	184017884	183919933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183921402_183925554_183925720_183927329_183927444_183928746_183928826_183937900_183938061_183942726_183942917_183945849_183945940_183947323_183947511_183949752_183949882_183949971_183950126_183951440_183951571_183951856_183952004_183953085_183953271_183959732_183959836_183961510_183961655_183963384_183963589_183965184_183965258_183965376_183965502_183967694_183967767_183971562_183971920_183977516_183977625_183978502_183978652_183981726_183981875_183982450_183982625_183982773_183983008_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_102187.known	chr3	-	1923	7	FSM	ENSG00000114770.17	ENST00000382494.6	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	94.935065527268	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	16	True	NA	-13	True	AATAAA	-17	NA	184017889	183983752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183984895_183985303_183985379_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_102188.known	chr3	-	2000	7	FSM	ENSG00000114770.17	ENST00000443376.5	2000	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	100.239158460598	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	16	True	NA	-13	True	AATAAA	-17	NA	184017889	183983752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183984895_183985303_183985456_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_102191.known	chr3	-	1848	6	FSM	ENSG00000114770.17	ENST00000392579.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	92.0412950799803	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	16	True	NA	-13	True	AATAAA	-17	NA	184017889	183983752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183984895_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_102192.known	chr3	-	883	3	FSM	ENSG00000114770.17	ENST00000446941.2	883	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	120	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTGTATGTTTGTCTAT	9870	False	NA	NA	False	ATTAAA	-18	NA	184017939	184000662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184001252_184014263_184014448_184017829
transcript_102193.known	chr3	-	4697	5	FSM	ENSG00000114770.17	ENST00000427120.6	4697	5	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	18.7533330370897	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	9946	False	NA	-13	True	AATAAA	-17	NA	184017863	183983752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_1022.nnic	chr1	-	329	3	NNC	ENSG00000162591.16	novel	7443	37	NA	NA	8738	-97055	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	16.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCCCTAAAATGTGTTG	8999	False	NA	NA	False	AATAAA	-27	NA	3602539	3589782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_3589928_3595337_3595448_3602465
transcript_102200.known	chr3	+	585	2	FSM	ENSG00000145191.15	ENST00000432569.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGCCAGTGGACTTT	-3	True	NA	15	True	AATAAA	-30	NA	184135364	184136980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184135581_184136611
transcript_102201.known	chr3	-	362	3	FSM	ENSG00000272721.5	ENST00000608135.1	362	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCACGTTGTAGAAAAGG	NA	False	NA	NA	False	ATTAAA	-3	NA	184135238	184134018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184134279_184134535_184134594_184135194
transcript_102202.known	chr3	+	3084	15	FSM	ENSG00000145191.15	ENST00000649814.1	3084	15	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_9	76.0080889895065	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTCTGCTGCTTGTATA	13	False	NA	-33	True	NA	NA	NA	184135336	184145263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142395_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184144225_184144596_184144708_184144883
transcript_102203.known	chr3	+	2850	15	FSM	ENSG00000145191.15	ENST00000465218.3	2850	15	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_7	28.5822301010789	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTATTTGGTTTGTCTCC	-5	True	NA	9	True	ATTAAA	-10	NA	184135362	184145305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143566_184144098_184144225_184144596_184144708_184144883
transcript_102205.nnic	chr3	+	1336	2	Genic_Genomic	ENSG00000228205.1	novel	732	1	NA	NA	-123644	85	multi-exon	FALSE	canonical	0	0	junction_1	0	1179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACAAAATTAGGGCTG	NA	False	NA	NA	False	AATAAA	-23	NA	184026059	184150520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_184026500_184149624
transcript_102206.nnic	chr3	+	1334	2	Genic_Genomic	ENSG00000228205.1	novel	732	1	NA	NA	-123643	85	multi-exon	FALSE	canonical	0	0	junction_1	0	1262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACAAAATTAGGGCTG	NA	False	NA	NA	False	AATAAA	-23	NA	184026060	184150520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_184026547_184149672
transcript_102208.nnic	chr3	+	1286	2	Genic_Genomic	ENSG00000228205.1	novel	732	1	NA	NA	-123642	85	multi-exon	FALSE	canonical	0	0	junction_1	0	1166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACAAAATTAGGGCTG	NA	False	NA	NA	False	AATAAA	-23	NA	184026061	184150520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_184026500_184149672
transcript_102209.nnic	chr3	-	1346	2	Genic_Genomic	ENSG00000223529.1	novel	1388	1	NA	NA	-122765	306	multi-exon	FALSE	canonical	0	0	junction_1	0	1181	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTATTTTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-25	NA	184150521	184026062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_-_184026509_184149621
transcript_102211.nnic	chr3	-	1302	2	Genic_Genomic	ENSG00000223529.1	novel	1388	1	NA	NA	-122764	306	multi-exon	FALSE	canonical	0	0	junction_1	0	1219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTATTTTATTTTATTT	NA	False	NA	NA	False	ATTAAA	-25	NA	184150520	184026062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_-_184026509_184149664
transcript_102213.known	chr3	+	732	1	FSM	ENSG00000228205.1	ENST00000433853.1	732	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	323	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGTCTCCTTAGCAGCTG	28	False	NA	NA	False	NA	NA	NA	184149703	184150435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184149700_184150400
transcript_102227.known	chr3	+	1931	12	FSM	ENSG00000161203.14	ENST00000292807.9	1931	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1283.10410675063	3517	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	-28	True	NA	21	True	AATAAA	-15	NA	184174854	184184091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180644_184180651_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_102230.known	chr3	+	2453	21	FSM	ENSG00000161204.12	ENST00000292808.5	2453	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	92.0642574509782	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCATGTCTGCT	-8	True	NA	18	True	ATTAAA	-15	NA	184186173	184194005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184186281_184186506_184186637_184186795_184186876_184187396_184187444_184187663_184187762_184187860_184187984_184188140_184188408_184188760_184188842_184188928_184188989_184189087_184189145_184189254_184189278_184189387_184189444_184189556_184189758_184189854_184189932_184190998_184191044_184191122_184191256_184192600_184192690_184192804_184192897_184193101_184193235_184193364_184193453_184193539
transcript_102235.known	chr3	-	1552	9	FSM	ENSG00000214160.10	ENST00000397676.8	1552	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	244.169382806281	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-10	True	NA	25	True	NA	NA	NA	184248962	184242300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
transcript_102236.nic	chr3	-	1524	9	NIC	ENSG00000214160.10	novel	1552	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	282.469467376564	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-19	True	NA	25	True	NA	NA	NA	184248971	184242300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_102237.known	chr3	-	1697	9	FSM	ENSG00000214160.10	ENST00000455059.5	1697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	316.944962690685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGTTGGACTCTGCCC	19	True	NA	-58	True	NA	NA	NA	184249520	184242468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248989
transcript_102238.known	chr3	-	1533	9	FSM	ENSG00000214160.10	ENST00000445626.6	1533	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.138891360881	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-9	True	NA	-14	True	AATAAA	-14	NA	184249548	184242424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184249225
transcript_102251.nic	chr3	-	1400	9	NIC	ENSG00000214160.10	novel	1533	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	282.469467376564	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-19	True	NA	-14	True	AATAAA	-14	NA	184248971	184242424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_102256.known	chr3	-	1452	8	FSM	ENSG00000214160.10	ENST00000411922.5	1452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	315.774331717175	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-10	True	NA	25	True	NA	NA	NA	184248962	184242300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184248744
transcript_102284.known	chr3	-	725	4	FSM	ENSG00000214160.10	ENST00000482048.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	102.306728354819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTATAGAAAGTTTCTG	23	True	NA	NA	False	NA	NA	NA	184248929	184245066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184245359_184245467_184245616_184245712_184245813_184248744
transcript_102285.known	chr3	-	1017	4	FSM	ENSG00000214160.10	ENST00000461415.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	274.71197037382	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATCTCCACCCTTCCTC	2	True	NA	NA	False	NA	NA	NA	184248950	184244758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184245359_184245467_184245616_184245712_184245813_184248781
transcript_102287.known	chr3	-	995	2	FSM	ENSG00000214160.10	ENST00000485912.1	995	2	0	0	0	0	multi-exon	FALSE	canonical	3	811	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTCTGCCCTTCCAAATAA	5950	False	NA	-48	True	NA	NA	NA	184243589	184242458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812
transcript_102288.known	chr3	-	904	6	FSM	ENSG00000214160.10	ENST00000423996.5	904	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	215.363878122586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAAAAGGCAGTAGTGC	3	True	NA	NA	False	NA	NA	NA	184248949	184243790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_102293.known	chr3	+	975	3	FSM	ENSG00000284753.2	ENST00000324557.9	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	2	2007	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGTTTCTTGCTTCTT	6	True	NA	14	True	AATACA	-24	NA	184249671	184258759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184249891_184257472_184257757_184258287
transcript_102295.known	chr3	+	2913	21	FSM	ENSG00000175166.17	ENST00000310118.9	2913	21	0	0	0	0	multi-exon	FALSE	canonical	3	2671	junction_8	281.674541803124	5285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTCTGTGTCTGTTTT	-1	True	NA	24	True	AATAAA	-16	NA	184299240	184309050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349_184306496_184306750_184306835_184307356_184307526_184307613_184307709_184307889_184308017_184308448_184308568_184308707
transcript_102296.known	chr3	+	5405	33	FSM	ENSG00000114867.22	ENST00000346169.7	5405	33	0	0	0	0	multi-exon	FALSE	canonical	3	1336	junction_14	315.943601573129	3712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	29	True	NA	23	True	ATTAAA	-16	NA	184314605	184335353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_102297.known	chr3	+	5229	30	FSM	ENSG00000114867.22	ENST00000392537.6	5229	30	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	454.071194007185	3615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCACTGCCTTTCTGCT	-35	True	NA	21	True	ATTAAA	-14	NA	184314541	184335351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184314675_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_1023.known	chr1	-	622	3	FSM	ENSG00000238260.2	ENST00000435049.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGGAGAATGAGAAAGA	24	False	NA	NA	False	NA	NA	NA	3624743	3623189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3623557_3624307_3624451_3624631
transcript_102302.known	chr3	+	1335	7	FSM	ENSG00000175182.15	ENST00000450976.5	1335	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	35.0115060452354	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGGGCTCAAGGCT	-20	True	NA	NA	False	NA	NA	NA	184335925	184345033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184336124_184337310_184337372_184338386_184338530_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_102307.known	chr3	+	2421	6	FSM	ENSG00000175182.15	ENST00000340957.9	2421	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	18.5321342537766	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	-9	True	NA	23	True	ATTAAA	-27	NA	184335936	184346273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_102309.nic	chr3	+	948	5	ISM	ENSG00000175182.15	ENST00000340957.9	2421	6	-27	3134	-16	0	5prime_fragment	FALSE	canonical	3	45	junction_2	19.7151591421424	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCGAAAGACCTCAAG	591	False	NA	NA	False	NA	NA	NA	184335909	184343139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743
transcript_102315.known	chr3	+	573	4	FSM	ENSG00000175182.15	ENST00000433578.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	35.311313893551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGACATCCTGGGCTA	-1	True	NA	NA	False	NA	NA	NA	184335944	184342860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184336124_184341723_184341818_184342065_184342249_184342743
transcript_102326.known	chr3	+	823	6	FSM	ENSG00000163882.10	ENST00000455712.5	823	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	303.689710066047	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAACCTCGCCTGAAG	8	False	NA	NA	False	NA	NA	NA	184362614	184368287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184362725_184363225_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_102327.known	chr3	+	994	5	FSM	ENSG00000163882.10	ENST00000438240.5	994	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	329.956815356192	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAAGTCCATTT	38	True	NA	-28	True	ATTAAA	-28	NA	184361788	184368550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184362147_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_102340.known	chr3	+	878	5	FSM	ENSG00000163882.10	ENST00000429568.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	307.53079114131	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATTGTTTCTG	3	True	NA	18	True	AAAAAG	-34	NA	184363433	184368596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
transcript_102341.known	chr3	+	791	5	FSM	ENSG00000163882.10	ENST00000452961.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	314.640270785543	2125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGACTGCCCCTCCCCTTT	-1	True	NA	16	True	ATTAAA	-11	NA	184363402	184368533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_102342.known	chr3	+	807	4	FSM	ENSG00000163882.10	ENST00000443489.5	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	356.432633497863	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTGGTGTATTGT	2	True	NA	13	True	AAAAAG	-29	NA	184363360	184368591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184368176
transcript_102343.known	chr3	-	1918	6	FSM	ENSG00000090534.20	ENST00000647395.1	1918	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.93938769133981	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGATGTTCTTCGAGG	-1	True	NA	NA	False	AATAAA	-32	NA	184378207	184371934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184373179_184373414_184373583_184375514_184375602_184375887_184376016_184376246_184376405_184378074
transcript_102347.known	chr3	-	1505	6	FSM	ENSG00000090534.20	ENST00000445696.6	1505	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.70944739819828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTGCAACTCACTGA	10	True	NA	NA	False	NA	NA	NA	184378140	184372268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184373167_184373414_184373583_184375514_184375602_184375887_184376016_184376246_184376405_184378074
transcript_102348.known	chr3	-	1701	1	FSM	ENSG00000177383.5	ENST00000317897.5	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2089	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTGTGATGCAC	29	False	184712093	-5	True	AATAAA	-19	NA	184712064	184710363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184710400_184712100
transcript_102357.known	chr3	+	5011	47	FSM	ENSG00000156931.16	ENST00000436792.6	5011	47	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_19	18.4956567731643	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTGGCTGGCTCTCA	-11	True	NA	27	True	AATAAA	-27	NA	184812170	185052612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839753_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_102360.nic	chr3	+	2463	6	ISM	ENSG00000156931.16	ENST00000287546.8	5047	47	-21	212077	-21	0	intron_retention	FALSE	canonical	3	200	junction_1	3.9293765408777	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	184812121	184840537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713
transcript_102363.known	chr3	+	477	2	FSM	ENSG00000156931.16	ENST00000485024.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGATATTTGTAGACTT	14	True	NA	5	True	AATAAA	-18	NA	184812195	184816230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184812226_184815783
transcript_102364.known	chr3	+	5047	47	FSM	ENSG00000156931.16	ENST00000287546.8	5047	47	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	34.2562621046684	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGCTGGCTCTCAGT	-6	True	NA	29	True	AATAAA	-29	NA	184812142	185052614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839759_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_102365.known	chr3	-	3801	7	FSM	ENSG00000113790.11	ENST00000231887.8	3801	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	4.05859855396197	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAAGTGACTT	-7	True	NA	0	True	AATAAA	-22	NA	185254049	185190623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185253948
transcript_102371.nnic	chr3	-	708	3	NNC	ENSG00000113790.11	novel	656	2	NA	NA	-68	6296	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	34.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCATTAAAAAGTGGGC	NA	False	NA	NA	False	AAGAAA	-5	NA	185254117	185241648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_185242084_185248413_185248518_185253948
transcript_102372.known	chr3	-	656	2	FSM	ENSG00000113790.11	ENST00000440662.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGAGTCTTATAATAGAA	11	True	NA	NA	False	AATAAA	-18	NA	185254031	185247944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185248518_185253948
transcript_102373.known	chr3	+	526	3	FSM	ENSG00000073803.14	ENST00000454237.1	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	151.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTGTTCTGTGGCC	48	False	NA	127	True	NA	NA	NA	185283025	185291917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_185283120_185285516_185285644_185291612
transcript_10238.nnic	chr1	+	688	4	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	-119	0	combination_of_known_splicesites	FALSE	canonical	3	100	junction_2	296.383010459252	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	8127	False	NA	22	True	AATAAA	-18	NA	154983218	154993111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_154983398_154983841_154984067_154992712_154992787_154992901
transcript_102381.known	chr3	+	1681	3	FSM	ENSG00000073803.14	ENST00000448876.5	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	34	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCACTTGCTGTTCTTTC	NA	False	NA	18	True	AATAAA	-24	NA	185282940	185293079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_185283028_185285516_185285644_185291612
transcript_102383.known	chr3	-	1284	1	FSM	ENSG00000229638.1	ENST00000422486.1	1284	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAAATTTGATTATTC	57	False	NA	NA	False	AAGAAA	-34	NA	185418778	185417494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185417500_185418800
transcript_102389.known	chr3	-	2805	5	FSM	ENSG00000163900.11	ENST00000421852.6	2805	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	16.7779617355625	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGCTTGTTTGAAC	-3	True	NA	-17	True	AATAAA	-16	NA	185499035	185489600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185491758_185494622_185494762_185495153_185495316_185496827_185496982_185498842
transcript_102394.known	chr3	-	1060	3	FSM	ENSG00000163900.11	ENST00000296254.3	1060	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	49.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAAAAGAAAATGCT	8	True	NA	NA	False	NA	NA	NA	185498987	185490996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185491758_185496827_185496982_185498842
transcript_102395.known	chr3	+	1565	2	FSM	ENSG00000286086.1	ENST00000651456.1	1565	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGTGTTTTATACTAT	-9	True	NA	NA	False	NA	NA	NA	185499139	185501109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_185499539_185499943
transcript_102397.nic	chr3	+	3326	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-78	696	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	31.6955734291084	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	NA	False	NA	29	True	AATAAA	-26	NA	185582417	185631101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_102399.known	chr3	+	5596	17	FSM	ENSG00000163904.13	ENST00000296257.10	5596	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	43.3777016449696	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCACTTGTTTTTT	-9	True	NA	8	True	AATAAA	-18	NA	185586294	185633551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_10241.known	chr1	+	1803	3	FSM	ENSG00000160688.19	ENST00000368431.7	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	332.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	18	True	NA	14	True	AATAAA	-18	NA	154983366	154989012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154983398_154983841_154984067_154987465
transcript_102413.nic	chr3	+	1345	11	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-78	1032	combination_of_known_junctions	FALSE	canonical	3	160	junction_1	31.5158690186388	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAATTGCTCAGGCA	NA	False	NA	16	True	NA	NA	NA	185582417	185614676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563
transcript_102414.nic	chr3	+	1260	11	ISM	ENSG00000163904.13	ENST00000296257.10	5596	17	-95	18875	-41	1032	5prime_fragment	FALSE	canonical	3	86	junction_1	46.4703131041744	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAATTGCTCAGGCA	3587	False	NA	16	True	NA	NA	NA	185586199	185614676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563
transcript_102418.nic	chr3	+	847	2	ISM	ENSG00000163904.13	ENST00000430355.5	878	7	-78	18725	-78	-10265	5prime_fragment	FALSE	canonical	3	160	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAACTTAAGTCTCTT	NA	False	NA	NA	False	NA	NA	NA	185582417	185590560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_185582818_185590113
transcript_102419.known	chr3	+	878	7	FSM	ENSG00000163904.13	ENST00000430355.5	878	7	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	26.1767496496838	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAACGACTTAAAGAAAG	-3	True	NA	NA	False	AAAAAG	-27	NA	185582495	185609285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246
transcript_10242.nic	chr1	+	1370	3	ISM	ENSG00000160688.19	ENST00000315144.14	1730	8	-198	4099	-177	0	5prime_fragment	FALSE	canonical	3	696	junction_1	100.5	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	8069	False	NA	14	True	AATAAA	-18	NA	154983160	154989012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_154983398_154983841_154984067_154988104
transcript_102426.known	chr3	-	3426	16	FSM	ENSG00000073792.16	ENST00000457616.6	3426	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	226.615347131556	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	-13	True	NA	17	True	TTTAAA	-10	NA	185825012	185643974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692781_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_102428.known	chr3	-	1697	10	FSM	ENSG00000136527.19	ENST00000456380.5	1697	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	470.048014358607	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAACATAT	-9	True	NA	-39	True	AATAAA	-13	NA	185938029	185917329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185937824
transcript_102437.known	chr3	-	976	8	FSM	ENSG00000136527.19	ENST00000382191.4	976	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	409.810658121777	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAAGACTTTCTGAAA	NA	False	NA	NA	False	ATTAAA	-36	NA	185938103	185917714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185937824
transcript_10244.known	chr1	+	757	3	FSM	ENSG00000160688.19	ENST00000487371.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	432.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGGTCAACCTT	44	False	NA	NA	False	NA	NA	NA	154983430	154988433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154983634_154983841_154984067_154988104
transcript_102447.known	chr3	-	288	2	FSM	ENSG00000136527.19	ENST00000480461.1	538	2	11	239	1	-239	multi-exon	FALSE	canonical	3	103	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAGAATGCATGCT	7	True	NA	13	True	NA	NA	NA	185938013	185931753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185931853_185937824
transcript_102449.known	chr3	-	4178	9	FSM	ENSG00000136527.19	ENST00000453386.7	4178	9	0	0	0	0	multi-exon	TRUE	canonical	3	965	junction_8	113.562138827164	3145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGATTGGTTCTATTCC	6	True	NA	NA	False	AATATA	-29	NA	185938014	185914557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185937824
transcript_102450.known	chr3	-	4485	10	FSM	ENSG00000136527.19	ENST00000487615.5	4485	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	488.606433557296	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCTTTCTAACATATC	600	False	NA	-38	True	AATAAA	-14	NA	185937420	185917328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185934428
transcript_102451.known	chr3	-	609	6	FSM	ENSG00000058866.15	ENST00000490452.5	609	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.748331477354788	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCATGATGATGGGGCC	10	True	NA	NA	False	ATTAAA	-19	NA	186242637	186150164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186150189_186161602_186161664_186164897_186165019_186188201_186188380_186211794_186211886_186242503
transcript_102452.known	chr3	-	2213	13	FSM	ENSG00000244405.8	ENST00000434744.5	2213	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	41.5036812289652	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCTGATTTGCACAATT	419	False	NA	NA	False	ACTAAA	-16	NA	186108675	186048251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108456
transcript_102453.known	chr3	-	4082	13	FSM	ENSG00000244405.8	ENST00000306376.10	4082	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	20.4142855754385	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAACCTGCCTCTTTCTT	5	True	NA	-4	True	AATAAA	-27	NA	186109089	186046313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_102454.nnic	chr3	-	649	7	NNC	ENSG00000244405.8	novel	642	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	79.0836406737969	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	544	False	NA	-5	True	AATAAA	-21	NA	186108550	186095119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_186095314_186096095_186096151_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108456
transcript_102457.nic	chr3	-	792	6	NIC	ENSG00000244405.8	novel	642	6	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	68.9712983783835	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	346	False	NA	-5	True	AATAAA	-21	NA	186108748	186095119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108456
transcript_102459.known	chr3	-	642	6	FSM	ENSG00000244405.8	ENST00000476890.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	46.4990322479942	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	13	True	NA	-5	True	AATAAA	-21	NA	186109081	186095119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_102463.known	chr3	-	554	7	FSM	ENSG00000244405.8	ENST00000421809.5	554	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	14.2672897060218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCACCCACCCATCAGAA	-5	True	NA	NA	False	NA	NA	NA	186108999	186080046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_102478.nnic	chr3	-	929	5	NNC	ENSG00000197099.8	novel	775	7	NA	NA	1496	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	11.2583302491977	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTACCTCCATCACTTC	NA	False	NA	-15	True	AATAAA	-13	NA	186664207	186641509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_186641624_186641953_186642129_186651193_186651330_186651409_186651495_186663788
transcript_10249.known	chr1	+	2189	7	FSM	ENSG00000160688.19	ENST00000292180.8	2189	7	0	0	0	0	multi-exon	TRUE	canonical	3	508	junction_2	133.821709748456	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	-5	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_102495.nnic	chr3	-	540	3	NNC	ENSG00000197099.8	novel	534	3	NA	NA	3171	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	15.5	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTACCTCCATCACTTC	1374	False	NA	-15	True	AATAAA	-13	NA	186662532	186641509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_186641624_186641953_186642129_186662281
transcript_102498.nnic	chr3	-	776	3	NNC	ENSG00000197099.8	novel	534	3	NA	NA	1428	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_2	1	201	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTACCTCCATCACTTC	NA	False	NA	-15	True	AATAAA	-13	NA	186664275	186641509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_186641624_186641953_186642129_186663788
transcript_102499.nnic	chr3	-	445	3	NNC	ENSG00000197099.8	novel	534	3	NA	NA	879	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	18	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTACCTCCATCACTTC	NA	False	NA	-15	True	AATAAA	-13	NA	186664824	186641509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_186641624_186641953_186642129_186664668
transcript_10250.known	chr1	+	648	4	FSM	ENSG00000160688.19	ENST00000489992.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	322.486519959448	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	422	False	NA	22	True	AATAAA	-18	NA	154988584	154993111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154988850_154990158_154990258_154992712_154992787_154992901
transcript_102503.known	chr3	+	1640	10	FSM	ENSG00000090520.12	ENST00000265028.8	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_4	60.7965642304088	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGACTCCTGTTTCTTC	14	True	NA	31	True	AATACA	-17	NA	186570719	186585793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186577801_186581370_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
transcript_102509.known	chr3	-	1536	2	FSM	ENSG00000213139.8	ENST00000460288.1	1536	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGACTATAATGCCTCT	6033	False	NA	1	True	AATAAA	-20	NA	186540520	186538598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186538969_186539354
transcript_10251.known	chr1	+	1839	7	FSM	ENSG00000160688.19	ENST00000368432.5	1839	7	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	128.624345371404	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	16	True	NA	22	True	AATAAA	-18	NA	154983364	154993111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712
transcript_102511.known	chr3	+	225	1	FSM	ENSG00000283390.1	ENST00000538831.3	225	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTCCAAGTGGGAGT	-3	True	NA	NA	False	NA	NA	NA	186596975	186597200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186597000_186597200
transcript_102512.known	chr3	-	2700	8	FSM	ENSG00000113838.13	ENST00000338733.10	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	17.5650394888511	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCTTTTTTTGTAAA	-18	True	NA	NA	False	AATAAA	-15	NA	186567339	186546066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186563993_186564373_186567266
transcript_102513.known	chr3	+	1844	11	FSM	ENSG00000090520.12	ENST00000680338.1	1844	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	372.869159357542	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTCTGTTTTTAAATACA	-6	True	NA	-5	True	AATATA	-45	NA	186570699	186585757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186577801_186579880_186580105_186581374_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
transcript_102514.nnic	chr3	+	1767	7	NNC	ENSG00000145192.13	novel	1574	7	NA	NA	1983	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	3.33749739908346	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCATGCTTATTGCGA	2004	False	NA	6	True	AATAAA	-18	NA	186615067	186621318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_186615556_186615684_186615796_186616442_186616528_186617186_186617351_186618535_186618638_186619856_186619941_186620585
transcript_102516.known	chr3	+	2093	11	FSM	ENSG00000113889.14	ENST00000287611.8	2093	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.640312423743285	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAATTTTCTGTAATAA	-2	True	NA	NA	False	AATAAA	-18	NA	186717358	186744410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186717738_186720104_186720216_186722436_186722522_186725087_186725261_186727236_186727345_186731544_186731630_186732501_186732675_186739098_186739207_186739327_186739415_186741521_186741600_186743704
transcript_102529.known	chr3	-	1365	11	FSM	ENSG00000163918.12	ENST00000296273.7	1365	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_10	108.391189678866	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTAAAGTGAATATACAA	-3	True	NA	-41	True	AATAAA	-20	NA	186806482	186789899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
transcript_10253.known	chr1	+	2936	23	FSM	ENSG00000143537.14	ENST00000356955.7	2936	23	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_19	27.0718740325889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	-4	True	NA	30	True	AATAAA	-21	NA	155051315	155062775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061414_155061490_155061903_155061976_155062244_155062370_155062459
transcript_102530.known	chr3	+	1889	11	FSM	ENSG00000156976.17	ENST00000440191.6	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	409.603222643572	7826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	-2	True	NA	30	True	AATAAA	-19	NA	186783576	186789897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_102531.known	chr3	+	1977	12	FSM	ENSG00000156976.17	ENST00000425053.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_11	564.882844578567	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	-2	True	NA	14	True	AATAAA	-3	NA	186783576	186789881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
transcript_102532.known	chr3	+	1729	10	FSM	ENSG00000156976.17	ENST00000443963.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_3	547.000710948147	4824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	18	False	NA	30	True	AATAAA	-19	NA	186783596	186789897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_102533.known	chr3	+	570	3	FSM	ENSG00000156976.17	ENST00000467585.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTGTAAGTATTGTCT	1	True	NA	NA	False	NA	NA	NA	186784202	186786044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186784478_186784563_186784697_186785882
transcript_102534.known	chr3	+	5327	4	FSM	ENSG00000156976.17	ENST00000485101.5	5327	4	0	0	0	0	multi-exon	FALSE	canonical	3	1463	junction_1	215.74213002255	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTTTGGTCATTT	-1	True	NA	27	True	AATAAA	-16	NA	186783577	186789894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784431_186784478_186784563_186786052_186786163
transcript_102535.known	chr3	-	1448	11	FSM	ENSG00000163918.12	ENST00000392481.6	1448	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	165.023755865633	1836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGAATATACAATTTAT	NA	False	NA	-36	True	AATAAA	-25	NA	186806695	186789894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_102536.known	chr3	-	1111	9	FSM	ENSG00000163918.12	ENST00000433496.5	1111	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	261.402915773715	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAACATTCAAACTT	1954	False	NA	-21	True	AATAAA	-40	NA	186804724	186789879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186790065_186790141_186790256_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582
transcript_102537.known	chr3	+	460	2	FSM	ENSG00000156976.17	ENST00000496382.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGGGTATAAAAGATGG	475	False	NA	NA	False	NA	NA	NA	186787775	186789477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186787883_186789124
transcript_102538.known	chr3	-	701	7	FSM	ENSG00000163918.12	ENST00000418288.5	701	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_6	206.066332362502	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGAAGGAAAATGTCAAA	8	True	NA	NA	False	GATAAA	-29	NA	186806471	186792521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_102539.known	chr3	+	360	1	FSM	ENSG00000223803.1	ENST00000412545.1	360	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTATTTTAATAAATT	116	False	NA	NA	False	NA	NA	NA	186900197	186900557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186900200_186900600
transcript_10254.known	chr1	+	2946	23	FSM	ENSG00000143537.14	ENST00000449910.6	2946	23	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_19	25.1570275083892	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061417_155061490_155061903_155061976_155062244_155062370_155062459
transcript_102540.known	chr3	+	4604	8	FSM	ENSG00000073849.16	ENST00000169298.8	4604	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	28.3037460562436	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	-27	True	NA	27	True	AATAAA	-20	NA	186930525	187078553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_102541.known	chr3	+	4386	7	FSM	ENSG00000073849.16	ENST00000416235.6	4386	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	94.0336819088423	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTTTAAGCTGCTTC	2647	False	NA	15	True	AATAAA	-8	NA	187024613	187078541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_187024859_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_10255.known	chr1	+	2874	22	FSM	ENSG00000143537.14	ENST00000359280.8	2874	22	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_19	26.3834449570266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	-34	True	NA	13	True	AATAAA	-4	NA	155051285	155062758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061903_155061976_155062244_155062370_155062459
transcript_10256.known	chr1	+	2799	21	FSM	ENSG00000143537.14	ENST00000271836.10	2799	21	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_19	24.131462864899	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	-14	True	NA	30	True	AATAAA	-21	NA	155051305	155062775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155062244_155062370_155062459
transcript_102561.known	chr3	-	653	2	FSM	ENSG00000163923.10	ENST00000455270.5	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	8	True	NA	-16	True	AATAAA	-26	NA	187139484	187120947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187121329_187139212
transcript_102562.known	chr3	-	729	3	FSM	ENSG00000163923.10	ENST00000296277.9	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_2	35.5	3788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-4	True	NA	-16	True	AATAAA	-26	NA	187139496	187120947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187121329_187127998_187128063_187139212
transcript_102563.known	chr3	-	749	4	FSM	ENSG00000163923.10	ENST00000433055.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	184.588431080848	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	NA	False	NA	-16	True	AATAAA	-26	NA	187180908	187120947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187121329_187127998_187128063_187173615_187173676_187180664
transcript_102567.nnic	chr3	+	1220	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-20600	-1001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTAACTACTT	NA	False	NA	NA	False	NA	NA	NA	187176885	187200461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_187176997_187197589_187197788_187199550
transcript_102568.nnic	chr3	+	3098	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-20600	-1001	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	6	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTAACTACTT	NA	False	NA	NA	False	NA	NA	NA	187176885	187200461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_187178875_187197589_187197788_187199550
transcript_102569.nnic	chr3	+	1184	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-19339	-1001	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	7.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTAACTACTT	NA	False	NA	NA	False	NA	NA	NA	187178146	187200461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_187178222_187197589_187197788_187199550
transcript_102571.known	chr3	-	2440	9	FSM	ENSG00000127241.18	ENST00000169293.10	2440	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3.07967124868873	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACGTATTAACAGCATTC	309	False	NA	NA	False	AATAAA	-14	NA	187291957	187246360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187247386_187250250_187250330_187251633_187251753_187253167_187253316_187256663_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
transcript_102572.nic	chr3	-	1450	5	ISM	ENSG00000127241.18	ENST00000169293.10	2440	9	-23	9945	0	279	5prime_fragment	FALSE	canonical	3	9	junction_2	2.59807621135332	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTCTGTTTATTTTT	-2	True	NA	-3	True	AATAAA	-13	NA	187291980	187256305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
transcript_102575.known	chr3	-	607	2	FSM	ENSG00000157005.4	ENST00000287641.4	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTGGTTTCTATTG	-1	True	NA	3	True	AATAAA	-23	NA	187670394	187668911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187669278_187670153
transcript_102576.known	chr3	-	3306	10	FSM	ENSG00000113916.18	ENST00000406870.7	3306	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	4.40818542775053	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTGGTCTGGAGGGCT	0	True	NA	-3	True	AATAAA	-17	NA	187745468	187721380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187722602_187724940_187725079_187725498_187725630_187726730_187726899_187728359_187728545_187729049_187730022_187731708_187731931_187733532_187733704_187734868_187734908_187745409
transcript_10258.known	chr1	-	822	2	FSM	ENSG00000232093.1	ENST00000452962.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTTTCAATGCTATTG	8438	False	NA	-4	True	ATTAAA	-22	NA	155046118	155045190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155045854_155045959
transcript_102588.nic	chr3	+	1268	3	ISM	ENSG00000145012.14	ENST00000414139.5	502	4	-77	77589	-18	797	5prime_fragment	FALSE	canonical	3	16	junction_1	9	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACTGAAGAATATTAGA	32	False	NA	NA	False	AATAAA	-7	NA	188153853	188407088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_188154022_188225404_188225528_188406111
transcript_10259.known	chr1	+	525	2	FSM	ENSG00000143537.14	ENST00000464824.2	525	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	9645	False	NA	30	True	AATAAA	-21	NA	155062160	155062775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155062370_155062459
transcript_102590.known	chr3	+	400	3	FSM	ENSG00000145012.14	ENST00000443217.5	400	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTTGCTCCAAAACCTA	-10	True	NA	NA	False	AAAAAG	-9	NA	188212703	188406260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_188212832_188225404_188225528_188406111
transcript_102591.known	chr3	-	697	2	FSM	ENSG00000234076.1	ENST00000444488.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGCCAACATGGTGA	3381	False	NA	NA	False	NA	NA	NA	188947639	188941714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_188942051_188947278
transcript_102593.known	chr3	-	3477	15	FSM	ENSG00000090530.10	ENST00000319332.10	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_5	73.5535345784252	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGCATTTATTTTTGT	1	True	NA	-14	True	AATAAA	-17	NA	190120897	189956727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190120251
transcript_102595.known	chr3	-	2963	15	FSM	ENSG00000090530.10	ENST00000427335.6	2963	15	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_14	238.896324964686	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCATCTGCTTATATTTT	0	True	NA	-15	True	AATAAA	-18	NA	190122437	189956830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190122202
transcript_102603.nic	chr3	-	942	2	ISM	ENSG00000090530.10	ENST00000319332.10	3477	15	482	37937	482	-5750	5prime_fragment	FALSE	canonical	3	1026	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAACACAGGCAGGGCC	-28	True	NA	NA	False	ATTAAA	-10	NA	190120415	189994664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_189995443_190120251
transcript_102617.nnic	chr3	+	814	4	FSM	ENSG00000225764.3	ENST00000691942.1	807	4	-3	-4	-3	4	multi-exon	FALSE	canonical	2	11	junction_1	4.54606056566195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	975	False	NA	29	True	ATTAAA	-21	NA	190120940	190150166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_190121090_190128928_190129076_190144997_190145136_190149786
transcript_102627.nnic	chr3	+	730	3	NNC	ENSG00000225764.3	novel	807	4	NA	NA	23924	4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	15	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	29	True	ATTAAA	-21	NA	190144887	190150166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_190145136_190146951_190147054_190149786
transcript_102628.nnic	chr3	+	802	3	NNC	ENSG00000225764.3	novel	807	4	NA	NA	23926	4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	13.5	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	29	True	ATTAAA	-21	NA	190144889	190150166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_190145136_190145265_190145446_190149790
transcript_102630.nnic	chr3	+	905	3	NNC	ENSG00000225764.3	novel	807	4	NA	NA	23931	4	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	2.5	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	29	True	ATTAAA	-21	NA	190144894	190150166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_190145136_190146769_190147054_190149786
transcript_102633.nnic	chr3	+	631	2	ISM	ENSG00000225764.3	ENST00000691942.1	807	4	23941	-4	23921	4	3prime_fragment	FALSE	canonical	3	22	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	29	True	ATTAAA	-21	NA	190144884	190150166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_190145136_190149786
transcript_102635.known	chr3	-	3446	4	FSM	ENSG00000163347.6	ENST00000295522.4	3446	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	2.44948974278318	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATTGGCTTGTTTTCT	-2	True	NA	-4	True	AATAAA	-22	NA	190322446	190305706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_190308440_190310168_190310254_190312871_190313037_190321983
transcript_102641.known	chr3	+	2048	9	FSM	ENSG00000196083.10	ENST00000422485.5	2048	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.55512151082224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	15	True	NA	NA	False	AATAAA	-43	NA	190514097	190630285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_190514220_190556129_190556217_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_102642.known	chr3	+	1957	8	FSM	ENSG00000196083.10	ENST00000422940.5	1957	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.16496563917521	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	19	False	NA	NA	False	AATAAA	-43	NA	190514101	190630285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_102646.known	chr3	+	1926	11	FSM	ENSG00000152492.15	ENST00000392456.4	1926	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	28.1440935188895	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGTATGATATTTTG	38	False	NA	20	True	AATAAA	-27	NA	191329084	191392175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_102648.nnic	chr3	+	1221	9	NNC	ENSG00000152492.15	novel	420	2	NA	NA	-1923	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	88.2453964804964	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGTATGATATTTTG	1710	False	NA	20	True	AATAAA	-27	NA	191359179	191392175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_191359304_191361068_191361160_191369918_191370037_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_10265.known	chr1	+	1817	5	FSM	ENSG00000143590.14	ENST00000368408.4	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	9.86154146165801	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	-24	True	NA	NA	False	AATAAA	-17	NA	155078836	155087538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155079070_155085090_155085405_155085876_155085943_155086127_155086206_155086412
transcript_102650.nnic	chr3	+	1606	2	Antisense	novelGene_ENSG00000237653.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGTGGTATTAAAATA	NA	False	NA	NA	False	AATAAA	-23	NA	191898158	191953329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_191898704_191952268
transcript_102658.known	chr3	+	672	3	FSM	ENSG00000232353.5	ENST00000444729.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTCCTAACAGA	NA	False	NA	NA	False	AATAAA	-12	NA	192029879	192036557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_192029907_192032306_192032412_192036017
transcript_10266.known	chr1	+	1254	4	FSM	ENSG00000243364.8	ENST00000368409.8	1254	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	8.33999733546454	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	-6	True	NA	35	True	AATAAA	-29	NA	155063739	155069553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068852
transcript_102661.known	chr3	-	3058	5	FSM	ENSG00000114279.15	ENST00000454309.6	3058	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	16.8874953737966	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAACACAAAA	1199	False	NA	NA	False	NA	NA	NA	192409049	192142508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192408024
transcript_102673.known	chr3	-	3063	2	FSM	ENSG00000180611.7	ENST00000392452.3	3063	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTTGTAATC	3	True	NA	0	True	AATAAA	-25	NA	192917856	192796814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_192799651_192917629
transcript_102676.nnic	chr3	+	1094	6	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	27.3744406335545	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	NA	False	NA	10	True	AATAAA	-22	NA	193240611	193270855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193251366_193251501_193254645_193254739_193255650_193255790_193262969_193263236_193270603
transcript_102677.nnic	chr3	+	1056	6	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	26.7985074211233	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	NA	False	NA	10	True	AATAAA	-22	NA	193240611	193270855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193251366_193251501_193254683_193254739_193255650_193255790_193262969_193263236_193270603
transcript_102679.nnic	chr3	+	1001	5	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	28.7869327994491	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	NA	False	NA	10	True	AATAAA	-22	NA	193240611	193270855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193251366_193251501_193255650_193255790_193262969_193263236_193270603
transcript_10268.known	chr1	+	1096	4	FSM	ENSG00000243364.8	ENST00000359751.8	1096	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	46.6571418851272	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	-9	True	NA	20	True	AATAAA	-14	NA	155063736	155069538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068998
transcript_102681.nnic	chr3	+	886	5	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-480	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28.2710098864544	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	NA	False	NA	10	True	AATAAA	-22	NA	193240647	193270855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193254683_193254739_193255650_193255790_193262969_193263236_193270603
transcript_102685.known	chr3	+	969	4	FSM	ENSG00000127252.7	ENST00000264735.4	969	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.49691252107735	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	-11	True	NA	10	True	AATAAA	-22	NA	193241221	193270855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193241534_193255650_193255790_193262969_193263236_193270603
transcript_102687.known	chr3	+	6429	31	FSM	ENSG00000198836.11	ENST00000361510.8	6429	31	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	107.024197679258	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	-15	True	NA	17	True	TATAAA	-19	NA	193593207	193697811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_102688.known	chr3	+	4087	30	FSM	ENSG00000198836.11	ENST00000392437.6	4087	30	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	115.486820492605	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGACATTCAAGCAAAG	-3	True	NA	8	True	AATAAA	-16	NA	193593279	193695652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193617783_193617838_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_10269.known	chr1	+	1052	4	FSM	ENSG00000243364.8	ENST00000427683.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	40.1331118487798	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	15	True	NA	20	True	AATAAA	-14	NA	155063760	155069538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155069018
transcript_102690.known	chr3	+	6397	30	FSM	ENSG00000198836.11	ENST00000361908.8	6397	30	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	62.6130558919877	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	-37	True	NA	17	True	TATAAA	-19	NA	193593185	193697811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_102697.known	chr3	+	6328	29	FSM	ENSG00000198836.11	ENST00000361828.7	6328	29	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	74.8616410862228	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	6	True	NA	17	True	TATAAA	-19	NA	193593143	193697811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_102704.known	chr3	-	772	2	FSM	ENSG00000214146.3	ENST00000414309.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCGGGCCACCTCCTCG	NA	False	NA	NA	False	NA	NA	NA	194003636	194001856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194002577_194003584
transcript_102705.known	chr3	+	1575	4	FSM	ENSG00000114315.4	ENST00000232424.4	1575	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	6.0184900284226	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTTTTCACCAATCCT	1	True	NA	NA	False	ATTAAA	-21	NA	194136147	194138732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194136489_194136616_194136713_194136960_194137049_194137682
transcript_102706.known	chr3	-	840	3	FSM	ENSG00000225742.6	ENST00000415869.6	840	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTGTGTGAGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	194205797	194203017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194203680_194204818_194204967_194205767
transcript_102708.nnic	chr3	-	1429	2	Antisense	novelGene_ENSG00000228271.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCCTGCTTGTGAGCG	8987	False	NA	NA	False	AATAAA	-24	NA	194286989	194283477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_194284445_194286527
transcript_10271.nic	chr1	+	1729	4	ISM	ENSG00000143590.14	ENST00000368408.4	1817	5	6109	0	-570	0	3prime_fragment	FALSE	canonical	3	115	junction_1	10.7806410858642	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	6037	False	NA	NA	False	AATAAA	-17	NA	155084945	155087538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_155085405_155085876_155085943_155086127_155086206_155086412
transcript_102713.known	chr3	-	3283	14	FSM	ENSG00000041802.11	ENST00000265245.10	3283	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.0141247721871	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTCTGGTATTTCT	15	True	NA	NA	False	ATTAAA	-18	NA	194672191	194640790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194642248_194644572_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_10272.known	chr1	+	776	4	FSM	ENSG00000143590.14	ENST00000498667.1	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	52.6898683071254	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCCCATTGCTCTCCTC	6613	False	NA	NA	False	NA	NA	NA	155085521	155086923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155085643_155085876_155085943_155086127_155086206_155086412
transcript_102728.known	chr3	+	1101	4	FSM	ENSG00000231770.7	ENST00000447982.7	1125	4	23	1	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	7	True	NA	NA	False	AATAAA	-20	NA	194584013	194590249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194584449_194589024_194589143_194589473_194589627_194589854
transcript_102731.known	chr3	+	663	3	FSM	ENSG00000231770.7	ENST00000419571.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	262	False	NA	NA	False	AATAAA	-20	NA	194584298	194590249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194584449_194589024_194589143_194589854
transcript_102733.known	chr3	+	972	2	FSM	ENSG00000229334.1	ENST00000447139.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGGGCCCTGTAATGC	-4	True	NA	NA	False	AATAAA	-23	NA	194632922	194645401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194633168_194644674
transcript_102735.known	chr3	+	905	1	FSM	ENSG00000231770.7	ENST00000666676.1	905	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAATTTGTTTTTAT	-3	True	NA	NA	False	AATGAA	-17	NA	194584003	194584908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194584000_194584900
transcript_102736.known	chr3	-	160	1	FSM	ENSG00000272707.1	ENST00000609789.1	160	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTGTTTTTGTTTTTG	NA	False	NA	-3	True	NA	NA	NA	194637664	194637504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194637500_194637700
transcript_102737.known	chr3	-	1278	5	FSM	ENSG00000145014.18	ENST00000330115.3	1278	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	17.5979402203781	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTCTTATGGGCAGGCA	37	False	NA	NA	False	NA	NA	NA	194633689	194622547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194623311_194623528_194623696_194625896_194625991_194628382_194628510_194633562
transcript_102739.known	chr3	-	865	4	FSM	ENSG00000173950.16	ENST00000429994.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.7462586092808	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAAGGACAGGGTTCCTT	6021	False	NA	NA	False	NA	NA	NA	195247920	195069676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195070112_195156448_195156582_195226708_195226857_195247771
transcript_10274.known	chr1	+	763	3	FSM	ENSG00000143590.14	ENST00000470294.5	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCACTGCCTGCTGCTTC	6607	False	NA	NA	False	NA	NA	NA	155085515	155086982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155085643_155085876_155085943_155086412
transcript_102744.known	chr3	-	3386	6	FSM	ENSG00000184203.8	ENST00000618156.5	3386	6	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_2	30.7805133160576	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGCCTGTGTGTGGATT	-3	True	NA	-6	True	AATAAA	-15	NA	195543325	195514427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195524818_195524897_195529793_195529902_195542903
transcript_102747.known	chr3	-	839	5	FSM	ENSG00000184203.8	ENST00000438848.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	146.644127055945	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGCAAAACAAATTACGA	-5	True	NA	NA	False	NA	NA	NA	195543353	195516924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195529793_195529902_195542903
transcript_10275.known	chr1	+	1552	5	FSM	ENSG00000169242.12	ENST00000368407.8	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.58457697592217	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGCTAAGTGCGAGGC	1	True	NA	74	True	ATTAAA	-16	NA	155127875	155134899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155128070_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_102750.known	chr3	-	1668	2	FSM	ENSG00000184203.8	ENST00000462906.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATAGTTA	6941	False	NA	NA	False	NA	NA	NA	195543386	195528716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195529902_195542903
transcript_102752.known	chr3	+	474	1	FSM	ENSG00000236844.1	ENST00000454858.1	474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCAGATTAGATTTTTA	NA	False	NA	NA	False	AAAACA	-5	NA	195554609	195555083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_195554600_195555100
transcript_102753.known	chr3	-	862	5	FSM	ENSG00000189058.9	ENST00000343267.8	862	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGATTAATTATTGTGGG	-1	True	NA	NA	False	AATAAA	-38	NA	195583940	195568704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195569136_195571276_195571366_195573849_195573972_195579338_195579496_195583877
transcript_102759.known	chr3	+	2131	14	FSM	ENSG00000242086.8	ENST00000429897.5	2131	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	27.4482838083489	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	-3	True	NA	NA	False	AATAAA	-11	NA	195658064	195688862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
transcript_102768.nic	chr3	+	1722	8	ISM	ENSG00000242086.8	ENST00000445430.5	4208	14	-38	14244	-23	105	5prime_fragment	FALSE	canonical	3	15	junction_4	37.255324232564	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAGACTTTTTTTTTTC	NA	False	NA	15	True	AATAAA	-17	NA	195658038	195671896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065_195666215_195668518_195668642_195671131
transcript_10277.known	chr1	+	1083	5	FSM	ENSG00000169242.12	ENST00000474413.5	1083	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.039531242695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCTTTCCCACCATT	200	False	NA	NA	False	NA	NA	NA	155129561	155134307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155129879_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_102773.known	chr3	+	1439	7	FSM	ENSG00000242086.8	ENST00000453324.5	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	29.4245740080558	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCGGATGGTTTCTTGT	5	True	NA	-90	True	ATTAAA	-8	NA	195658072	195671791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131
transcript_102774.known	chr3	+	1279	6	FSM	ENSG00000242086.8	ENST00000457233.5	1279	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	35.3021245819568	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAATCAGCAAAACT	-6	True	NA	NA	False	TTTAAA	-26	NA	195658061	195666682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195663623_195663768_195664085_195664251_195666065
transcript_102779.nnic	chr3	+	1479	6	NIC	ENSG00000242086.8	novel	1439	7	NA	NA	-10	105	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	37.613827244778	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAGACTTTTTTTTTTC	NA	False	NA	15	True	AATAAA	-17	NA	195658051	195671896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_195658166_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131
transcript_10278.nnic	chr1	+	2295	5	NNC	ENSG00000169242.12	novel	719	4	NA	NA	514	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.039531242695	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	714	False	NA	32	True	AATAAA	-19	NA	155130075	155134857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_155131055_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_102782.nic	chr3	+	1250	5	ISM	ENSG00000242086.8	ENST00000453324.5	1439	7	-34	5017	-23	92	5prime_fragment	FALSE	canonical	3	45	junction_1	27.6631523872461	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	195658038	195666774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065
transcript_102785.nnic	chr3	+	1123	4	NIC	ENSG00000242086.8	novel	1439	7	NA	NA	-10	2531	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	31.8363872880633	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAGCAGGAATTGT	NA	False	NA	NA	False	NA	NA	NA	195658051	195669213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_195658166_195664085_195664251_195666065_195666215_195668518
transcript_102787.known	chr3	-	16756	25	FSM	ENSG00000145113.22	ENST00000463781.8	16756	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	1.6067349570549	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAACCAGGAATTCCATT	-2	True	NA	0	True	AATAAA	-23	NA	195811929	195746770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195747381_195748901_195749065_195750888_195751113_195751206_195751272_195752372_195752447_195753050_195753231_195754212_195754373_195757146_195757329_195759123_195759262_195760883_195761118_195761483_195761586_195762086_195762255_195762854_195762946_195763432_195763642_195764044_195764165_195764996_195765123_195765269_195765450_195766662_195766752_195769021_195769153_195770215_195770372_195771651_195771817_195774171_195774306_195778302_195778456_195778789_195791498_195811735
transcript_102788.known	chr3	-	408	2	FSM	ENSG00000223783.1	ENST00000429834.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTCTGGGGCAAGGT	NA	False	NA	NA	False	GGGGCT	-1	NA	195860404	195836339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195836616_195860272
transcript_102798.nnic	chr3	-	1884	12	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_1	21.0560056017476	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	NA	False	NA	-15	True	AATAAA	-16	NA	195990304	195963103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195990189
transcript_10280.known	chr1	+	1444	4	FSM	ENSG00000169242.12	ENST00000368406.2	1444	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	14.1656862405839	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	1	True	NA	32	True	AATAAA	-19	NA	155127875	155134857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155128070_155131338_155131635_155133729_155133781_155133954
transcript_102801.known	chr3	-	548	5	FSM	ENSG00000185485.14	ENST00000435731.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	17.6988700204279	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTGTGGAGTATTT	NA	False	NA	NA	False	NA	NA	NA	195990305	195982292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_102802.nnic	chr3	-	1129	4	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	1	578	combination_of_known_splicesites	FALSE	canonical	3	53	junction_3	6.53197264742181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGCAGGAATTGTTCAG	NA	False	NA	NA	False	NA	NA	NA	195990304	195979166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_195979867_195982161_195982311_195984111_195984277_195990189
transcript_102803.nnic	chr3	-	1153	4	NIC	ENSG00000185485.14	novel	548	5	NA	NA	2	693	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	14.1656862405839	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	195990303	195981599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_195982311_195984111_195984277_195985626_195985790_195990189
transcript_102804.nnic	chr3	-	991	3	NIC	ENSG00000185485.14	novel	548	5	NA	NA	1	693	combination_of_known_splicesites	FALSE	canonical	3	53	junction_2	8	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAAAAGCCC	NA	False	NA	NA	False	NA	NA	NA	195990304	195981599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_195982311_195984111_195984277_195990189
transcript_102805.known	chr3	-	706	5	FSM	ENSG00000185485.14	ENST00000427149.5	706	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.7285260377565	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGAAAGTAGATAAAATTT	NA	False	NA	NA	False	AATAAA	-20	NA	195967520	195959747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195960087_195960299_195960424_195963299_195963422_195965428_195965543_195967513
transcript_102806.known	chr3	-	5012	19	FSM	ENSG00000072274.13	ENST00000360110.9	5012	19	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_14	45.1313583461969	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	1	True	NA	-6	True	AATAAA	-16	NA	196082090	196049283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196082042
transcript_102807.known	chr3	-	4814	18	FSM	ENSG00000072274.13	ENST00000420415.5	4814	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	139.613703335917	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-3	True	NA	-6	True	AATAAA	-16	NA	196082094	196049283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196077063_196077123_196082042
transcript_102812.nnic	chr3	-	797	5	NNC	ENSG00000163958.14	novel	1308	8	NA	NA	3854	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	19.9546360528074	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	3864	False	NA	-1	True	ATTAAA	-20	NA	196207532	196197451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_196197726_196198275_196198452_196198788_196198875_196207155_196207282_196207397
transcript_102815.nic	chr3	-	701	4	ISM	ENSG00000163958.14	ENST00000296326.8	1308	8	3838	0	3824	0	3prime_fragment	FALSE	canonical	3	20	junction_3	14.7044966667419	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	3834	False	NA	-1	True	ATTAAA	-20	NA	196207562	196197451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_196197726_196198275_196198452_196198788_196198875_196207397
transcript_102817.nic	chr3	-	840	4	NIC	ENSG00000163958.14	novel	1308	8	NA	NA	3824	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	19.3620476419435	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	3834	False	NA	-1	True	ATTAAA	-20	NA	196207562	196197451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_196197726_196198275_196198591_196198788_196198875_196207397
transcript_102819.nnic	chr3	-	622	3	NIC	ENSG00000163958.14	novel	1813	8	NA	NA	3817	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	22	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	3827	False	NA	-1	True	ATTAAA	-20	NA	196207569	196197451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_196197726_196198275_196198452_196207397
transcript_102821.known	chr3	-	572	3	FSM	ENSG00000163958.14	ENST00000460442.5	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	14.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	8601	False	NA	-1	True	ATTAAA	-20	NA	196198910	196197451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196197726_196198275_196198452_196198788
transcript_102824.known	chr3	-	5597	10	FSM	ENSG00000161217.12	ENST00000292823.6	5597	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	39.0811122325521	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-10	True	NA	-2	True	AATAAA	-21	NA	196287713	196234367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196283474_196283539_196287614
transcript_102829.known	chr3	+	1430	9	FSM	ENSG00000163959.10	ENST00000296327.10	1430	9	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_4	3.96862696659689	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCACCTTGCCTCT	-3	True	NA	11	True	AATAAA	-23	NA	196216533	196233427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196216751_196217841_196217937_196226964_196227120_196227663_196227738_196228114_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
transcript_102832.known	chr3	-	5546	9	FSM	ENSG00000161217.12	ENST00000431016.6	5546	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	16.5887763261791	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-23	True	NA	-2	True	AATAAA	-21	NA	196287726	196234367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_10284.known	chr1	+	1346	6	FSM	ENSG00000169241.19	ENST00000475824.6	1346	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	146.577488039603	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGAGGTTGCAGTGAGC	13	True	NA	-88	True	NA	NA	NA	155135390	155138751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135681_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_102855.known	chr3	+	322	2	FSM	ENSG00000235897.1	ENST00000420226.1	322	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGTGAATTTTGTTGT	599	False	NA	NA	False	TTTAAA	-23	NA	196318329	196323673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196318438_196323459
transcript_102856.known	chr3	+	1829	2	FSM	ENSG00000235897.1	ENST00000452051.1	1829	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACACCTACATAGCGTT	619	False	NA	NA	False	TTTAAA	-7	NA	196318349	196325570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196318438_196323829
transcript_102857.known	chr3	-	625	5	FSM	ENSG00000213123.11	ENST00000325318.10	625	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	216.121493609497	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-30	True	NA	0	True	AATAAA	-25	NA	196318240	196291218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
transcript_102858.known	chr3	-	603	5	FSM	ENSG00000213123.11	ENST00000426563.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	174.015085552949	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-4	True	NA	0	True	AATAAA	-25	NA	196318214	196291218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318035
transcript_102859.known	chr3	-	800	6	FSM	ENSG00000213123.11	ENST00000446494.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.562118192274	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTGTTTTAGGCC	11	True	NA	-2	True	AATAAA	-23	NA	196318299	196291220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196291375_196296005_196296070_196305655_196305774_196306942_196307013_196316097_196316232_196318039
transcript_10286.known	chr1	+	1298	6	FSM	ENSG00000169241.19	ENST00000368404.9	1298	6	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	90.4070793688193	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	5	True	NA	14	True	AATAAA	-19	NA	155135851	155138853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_102860.known	chr3	-	457	2	FSM	ENSG00000213123.11	ENST00000465757.5	457	2	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	NA	False	NA	0	True	AATAAA	-25	NA	196296306	196291218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196291375_196296005
transcript_102862.known	chr3	-	10521	11	FSM	ENSG00000163960.12	ENST00000296328.9	10521	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	3.85227205685164	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTTTTTGTGTTGTT	8	True	NA	-8	True	AATAAA	-19	NA	196432427	196347661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196407245_196407394_196432326
transcript_102865.known	chr3	-	3158	10	FSM	ENSG00000163960.12	ENST00000429160.1	3158	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	9.15302014516399	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTGTATAAATATTT	8	True	NA	-54	True	NA	NA	NA	196432427	196354876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196432326
transcript_102870.known	chr3	-	921	4	FSM	ENSG00000163960.12	ENST00000493566.1	921	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	13.2748718344933	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTTTGACCTCTGTTTC	8	True	NA	NA	False	NA	NA	NA	196432427	196400128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196400733_196402951_196403020_196407245_196407394_196432326
transcript_102875.nic	chr3	-	881	2	ISM	ENSG00000163960.12	ENST00000493566.1	921	4	-1	6486	-1	-6486	5prime_fragment	FALSE	canonical	3	27	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCCAGGCGT	7	True	NA	NA	False	ACTAAA	-9	NA	196432428	196406614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_196407394_196432326
transcript_102876.nic	chr3	-	445	2	ISM	ENSG00000163960.12	ENST00000493566.1	921	4	-70	6991	-67	-6991	5prime_fragment	FALSE	canonical	3	27	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGGAAATTTTTGTAG	NA	False	NA	NA	False	AATAAA	-29	NA	196432497	196407119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_196407394_196432326
transcript_102877.known	chr3	-	5347	6	FSM	ENSG00000163961.4	ENST00000318037.3	5347	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.81575680566778	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATTATGTGTATTTT	-6	True	NA	-20	True	AATAAA	-17	NA	196503768	196468782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196472773_196475230_196475313_196483769_196483892_196487398_196487579_196488606_196488684_196502872
transcript_102883.nic	chr3	-	1331	4	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-93	15024	-93	-12047	5prime_fragment	FALSE	canonical	3	13	junction_1	4.10960933531265	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAGAACAAACAAAGAAAC	NA	False	NA	NA	False	AAGAAA	-2	NA	196503861	196483806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_196483892_196487398_196487579_196488606_196488684_196502872
transcript_102886.nic	chr3	-	1164	3	ISM	ENSG00000163961.4	ENST00000318037.3	5347	6	-93	18698	-93	-15721	5prime_fragment	FALSE	canonical	3	19	junction_1	2	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGGCAGAAAAAAGGCGAA	NA	False	NA	16	True	AATACA	-41	NA	196503861	196487480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_196487579_196488606_196488684_196502872
transcript_102889.known	chr3	-	2202	5	FSM	ENSG00000163961.4	ENST00000437070.1	2202	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.76085931090146	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGAATCTTCATCCATG	156	False	NA	NA	False	AGTAAA	-25	NA	196503677	196471759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196472773_196475230_196475313_196483769_196483892_196487398_196487579_196502872
transcript_1029.known	chr1	-	1692	12	FSM	ENSG00000116213.16	ENST00000270708.12	1692	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	17.1955212312167	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-14	True	NA	-3	True	AATAAA	-20	NA	3650103	3630769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_10290.known	chr1	+	890	6	FSM	ENSG00000169241.19	ENST00000488609.5	890	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	151.314242555022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTGGGGCCTAGGA	20	True	NA	NA	False	GATAAA	-28	NA	155135866	155138440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136397_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_102901.known	chr3	-	1594	4	FSM	ENSG00000185798.8	ENST00000332629.7	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	36.7695526217005	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-1	True	NA	4	True	AATAAA	-25	NA	196568554	196554176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196554808_196560995_196561492_196566876_196567308_196568518
transcript_102906.nic	chr3	-	1587	4	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	34.6538437823121	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-7	True	NA	4	True	AATAAA	-25	NA	196568560	196554176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_196554808_196560995_196561492_196566889_196567308_196568518
transcript_102907.known	chr3	+	5927	3	FSM	ENSG00000174013.8	ENST00000311630.7	5927	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	1	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCTGTGATTGCTTACAT	-1	True	NA	13	True	AATAAA	-15	NA	196568659	196589059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196569303_196577452_196577810_196584132
transcript_102911.nnic	chr3	-	1196	3	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	39	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-7	True	NA	4	True	AATAAA	-25	NA	196568587	196554176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_196554808_196560995_196561492_196568518
transcript_102920.known	chr3	-	683	2	FSM	ENSG00000185798.8	ENST00000429115.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCAAAACTGTTTTTC	-1	True	NA	-7	True	AATAAA	-14	NA	196568581	196554187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196554808_196568518
transcript_102922.known	chr3	-	348	2	FSM	ENSG00000232065.2	ENST00000441644.2	461	2	113	0	113	0	multi-exon	FALSE	canonical	2	4	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTACCACATTTCCAC	7423	False	NA	NA	False	AATAAA	-29	NA	196632587	196631497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196631646_196632387
transcript_102923.nnic	chr3	-	599	2	NNC	ENSG00000232065.2	novel	461	2	NA	NA	-215	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGGGTGTTACCACATT	7095	False	NA	NA	False	AATAAA	-24	NA	196632915	196631502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_196631646_196632459
transcript_102927.known	chr3	+	838	4	FSM	ENSG00000163964.18	ENST00000451319.1	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	100.499861802006	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTTGATGTTTTGTG	269	False	NA	NA	False	NA	NA	NA	196712680	196728110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196713125_196716857_196716922_196722414_196722557_196727922
transcript_102928.known	chr3	-	2158	3	FSM	ENSG00000174007.9	ENST00000409690.5	2158	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	6	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTCTACCTGTTC	-5	True	NA	NA	False	AATAAA	-15	NA	196712250	196706276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196707913_196708527_196708728_196711928
transcript_10293.known	chr1	+	1137	5	FSM	ENSG00000169241.19	ENST00000303343.12	1137	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	138.400686414483	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGATGGTTCATTCTCTA	3	True	NA	13	True	AATAAA	-18	NA	155135849	155138852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137978_155138099_155138179
transcript_102932.known	chr3	+	586	2	FSM	ENSG00000174004.6	ENST00000461791.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGGCCGAGGCAGGCAG	-26	True	NA	NA	False	NA	NA	NA	196639756	196654993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196639876_196654526
transcript_102934.known	chr3	-	1172	2	FSM	ENSG00000174007.9	ENST00000399942.4	1172	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTCCATCTCAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	196712248	196707060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196707913_196711928
transcript_102935.known	chr3	+	6139	15	FSM	ENSG00000180370.10	ENST00000327134.7	6139	15	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_8	21.3432826501856	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGTGCCATCATTTT	-40	True	NA	NA	False	GATAAA	-18	NA	196739856	196832647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196740158_196782625_196782834_196801926_196802028_196803016_196803165_196805351_196805384_196806578_196806687_196807781_196807915_196810589_196810654_196812218_196812268_196812738_196812852_196814450_196814569_196818056_196818157_196820370_196820568_196827195_196827334_196828318
transcript_102938.known	chr3	+	6244	10	FSM	ENSG00000119231.11	ENST00000323460.10	6244	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	8.19364402870517	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTCTCTCGTCTTGA	13	True	NA	8	True	AATAAA	-18	NA	196867919	196934714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196868074_196885150_196886695_196899665_196899772_196899923_196900063_196900364_196900413_196903532_196903611_196923413_196923552_196927795_196927880_196929632_196929684_196930812
transcript_10294.known	chr1	+	1166	5	FSM	ENSG00000169241.19	ENST00000650403.1	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	105.057127316522	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	11	True	NA	12	True	AATAAA	-17	NA	155135857	155138851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136377_155137560_155137723_155137978_155138099_155138179
transcript_102943.known	chr3	+	765	2	FSM	ENSG00000119231.11	ENST00000463245.1	765	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTACCATGTACTATT	NA	False	NA	NA	False	NA	NA	NA	196929185	196931079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196929684_196930812
transcript_102949.known	chr3	-	676	4	FSM	ENSG00000114503.11	ENST00000422610.5	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	373.161567629299	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTACCAAGATTTGATC	1217	False	NA	-99	True	NA	NA	NA	196941906	196936925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941708
transcript_102951.known	chr3	-	2216	4	FSM	ENSG00000114503.11	ENST00000447325.5	2216	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	363.752968678226	2878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	746	False	NA	-5	True	AATAAA	-16	NA	196942377	196935405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942159
transcript_102952.known	chr3	-	2220	4	FSM	ENSG00000114503.11	ENST00000428425.1	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	339.295675710074	3034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTTGTTGCTGCCTGTT	529	False	NA	-8	True	AATAAA	-13	NA	196942594	196935408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942369
transcript_102956.known	chr3	-	1133	4	FSM	ENSG00000114503.11	ENST00000452404.6	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	346.82015832737	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTTCTTTGACAACA	-4	True	NA	50	True	NA	NA	NA	196942440	196936776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941934
transcript_102957.known	chr3	-	2101	4	FSM	ENSG00000114503.11	ENST00000321256.10	2101	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_2	26.6624996744283	3943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	14	True	NA	-5	True	AATAAA	-16	NA	196942528	196935405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942425
transcript_102958.known	chr3	-	4161	2	FSM	ENSG00000114503.11	ENST00000463783.1	4161	2	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTGTTGCTGCCTGTTTC	-18	True	NA	-6	True	AATAAA	-15	NA	196942560	196935406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196939433_196942425
transcript_102959.known	chr3	-	1946	4	FSM	ENSG00000114503.11	ENST00000427641.2	1946	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	346.973902316714	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-18	True	NA	10	True	NA	NA	NA	196942560	196935433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937632_196939392_196939433_196942425
transcript_102960.known	chr3	-	1096	3	FSM	ENSG00000114503.11	ENST00000468923.5	1096	3	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_1	1.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAATCTTGGCCATGT	19	True	NA	-6	True	ATTAAA	-34	NA	196942523	196936832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937649_196939250_196939433_196942425
transcript_102961.known	chr3	+	870	1	FSM	ENSG00000270170.2	ENST00000602845.2	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	352	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGTGCTGGGACTTG	-3	True	NA	20	True	AATAAA	-20	NA	196942673	196943543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196942700_196943500
transcript_102962.nnic	chr3	-	757	3	NIC	ENSG00000163975.13	novel	4555	4	NA	NA	-31	-1318	intron_retention	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATGTTTAAAAAGTACAT	180	False	NA	NA	False	AATAAA	-15	NA	197004210	196983888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_196984196_196984744_196984885_197003900
transcript_102963.known	chr3	+	468	2	ISM	ENSG00000228109.2	ENST00000414354.2	678	3	603	2	113	2	3prime_fragment	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGAATGTCTATGTAAA	460	False	NA	12	True	AATAAA	-17	NA	197003749	197004740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_197003971_197004493
transcript_102965.known	chr3	-	4853	25	FSM	ENSG00000075711.21	ENST00000667157.1	4853	25	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_24	60.9697101482003	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	8	True	NA	0	True	ATTAAA	-25	NA	197298612	197042559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_102966.known	chr3	-	4912	25	FSM	ENSG00000075711.21	ENST00000357674.9	4912	25	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_24	62.0758944089142	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAAGGATGCCATTTA	14	True	NA	-53	True	NA	NA	NA	197298606	197042612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
transcript_102968.known	chr3	-	2605	17	FSM	ENSG00000075711.21	ENST00000471733.5	2605	17	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_16	63.0611991937197	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	197298631	197080477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_102977.nic	chr3	-	1353	5	ISM	ENSG00000075711.21	ENST00000419227.5	1771	15	-80	124608	-25	512	5prime_fragment	FALSE	canonical	3	49	junction_4	93.4542000126265	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATTAACATCATCTTTA	-36	True	NA	NA	False	NA	NA	NA	197298656	197193824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
transcript_102978.nic	chr3	-	1272	5	ISM	ENSG00000075711.21	ENST00000471733.5	2605	17	-62	113347	-62	512	5prime_fragment	FALSE	canonical	3	57	junction_4	90.0038193634026	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATTAACATCATCTTTA	613	False	NA	NA	False	NA	NA	NA	197298693	197193824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_102981.known	chr3	-	3994	26	FSM	ENSG00000075711.21	ENST00000419354.5	3994	26	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_25	93.3885988758799	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGGAATTATTTTCTTT	6	True	NA	-92	True	AATAAA	-42	NA	197299300	197043630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197161639_197161739_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197299044
transcript_102983.known	chr3	-	3527	8	FSM	ENSG00000161267.12	ENST00000392379.6	3527	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	56.9679465908287	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	6	True	NA	-7	True	ATTAAA	-15	NA	197555968	197509782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197554561_197554714_197555780
transcript_102985.known	chr3	-	3455	7	FSM	ENSG00000161267.12	ENST00000392378.6	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_6	10.899796124495	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197556048	197509782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197555780
transcript_102987.known	chr3	-	868	6	FSM	ENSG00000161267.12	ENST00000446746.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	54.0718041126797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATCGCCAAGAAGAT	2	True	NA	NA	False	NA	NA	NA	197555972	197512167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197555780
transcript_102989.nic	chr3	-	641	5	NIC	ENSG00000161267.12	novel	5154	12	NA	NA	-5	1779	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	53.6493243200695	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTATTTTTGTTAT	NA	False	NA	NA	False	AATGAA	-1	NA	197555999	197530632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_197530745_197532411_197532523_197533488_197533562_197546360_197546487_197555780
transcript_102990.known	chr3	-	609	3	FSM	ENSG00000161267.12	ENST00000468710.1	609	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	55.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGAATGGCAGGCCG	-3	True	NA	NA	False	AATATA	-13	NA	197555977	197538666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197538953_197546360_197546487_197555780
transcript_102991.nic	chr3	-	539	2	ISM	ENSG00000161267.12	ENST00000432819.5	955	7	-8	40117	-1	-14	5prime_fragment	FALSE	canonical	3	20	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGAGTGATTCAACATT	-14	True	NA	NA	False	AATAAA	-16	NA	197555988	197554382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_197554714_197555780
transcript_102992.known	chr3	-	1605	7	FSM	ENSG00000161267.12	ENST00000441275.5	1605	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.2339345014613	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTCATTTGATCCTTAA	-13	True	NA	-26	True	ATTAAA	-4	NA	197555987	197511593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532515_197533484_197533562_197554561_197554714_197555780
transcript_102993.known	chr3	-	544	2	FSM	ENSG00000161267.12	ENST00000492681.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCAGGCTGGAGTGCA	18	True	NA	NA	False	NA	NA	NA	197555956	197546118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197546487_197555780
transcript_102994.known	chr3	-	680	2	FSM	ENSG00000161267.12	ENST00000476764.2	680	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTGGGTCTTGTCTGT	298	False	NA	NA	False	AATAAA	-30	NA	197555676	197554368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197554714_197555341
transcript_102995.known	chr3	-	1552	8	FSM	ENSG00000214135.9	ENST00000418868.6	1555	8	3	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	29.3146198811363	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAGATATTCAGGG	NA	False	NA	NA	False	AATAAA	-20	NA	197627906	197614026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_102996.known	chr3	-	1503	7	FSM	ENSG00000214135.9	ENST00000449003.6	2435	7	0	932	0	-696	multi-exon	FALSE	canonical	3	38	junction_3	26.6671874949138	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTCTTGCCCAATGTT	9	True	NA	NA	False	TTTAAA	-25	NA	197627871	197614981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_10300.known	chr1	+	1003	4	FSM	ENSG00000169241.19	ENST00000368405.7	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	146.13540144522	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	12	True	NA	12	True	AATAAA	-17	NA	155135858	155138851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136377_155137978_155138099_155138179
transcript_103001.known	chr3	+	6733	9	FSM	ENSG00000122068.13	ENST00000241502.9	6733	9	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_4	18.9962989816438	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTGTATCAATTGCTA	-32	True	NA	13	True	AATAAA	-17	NA	197749882	197787596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_103010.known	chr3	-	416	2	FSM	ENSG00000145016.16	ENST00000472149.1	416	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATTAGCCGGGC	-8	True	NA	NA	False	AATAAA	-13	NA	197749347	197748108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197748446_197749268
transcript_103022.known	chr3	+	2258	19	FSM	ENSG00000186001.14	ENST00000334859.8	2258	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_16	24.5344932294248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGTCTCACTTCTAC	21	True	NA	NA	False	TATAAA	-16	NA	197791273	197871585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324
transcript_103026.nic	chr3	+	2869	12	ISM	ENSG00000186001.14	ENST00000334859.8	2258	19	-67	22297	-19	789	5prime_fragment	FALSE	canonical	3	147	junction_11	21.935291764492	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAGGCAAATCTTTTG	253	False	NA	NA	False	NA	NA	NA	197791206	197849288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871
transcript_103031.nnic	chr3	+	986	5	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-19	1835	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	79.4260662503186	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTTTCTGTAGTTGT	253	False	NA	11	True	AATAAA	-17	NA	197791206	197885833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820368_197885496
transcript_103035.nnic	chr3	+	1248	5	NNC	ENSG00000182899.17	novel	564	5	NA	NA	-99845	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6627.92490150575	26189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	NA	False	NA	48	True	ATTAAA	-18	NA	197850344	197955851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197851150_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_103036.nnic	chr3	+	1157	5	NNC	ENSG00000182899.17	novel	564	5	NA	NA	-99838	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6627.92490150575	26185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	NA	False	NA	48	True	ATTAAA	-18	NA	197850351	197955851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197851066_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_103039.nnic	chr3	+	954	4	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-19	1846	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.1842896679455	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGTTAACTGTTCTG	253	False	NA	22	True	AATAAA	-28	NA	197791206	197885844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197885496
transcript_103040.nnic	chr3	+	762	3	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-19	1833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	88.5	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	253	False	NA	9	True	AATAAA	-15	NA	197791206	197885831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815012_197885507
transcript_103041.nnic	chr3	+	756	3	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-19	1833	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	88.5	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	253	False	NA	9	True	AATAAA	-15	NA	197791206	197885831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815016_197885517
transcript_103043.known	chr3	-	555	1	FSM	ENSG00000234742.1	ENST00000452862.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	829	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	31	False	NA	NA	False	AAGAAA	-34	NA	197850954	197850399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197850400_197851000
transcript_103044.known	chr3	-	2232	12	FSM	ENSG00000114473.14	ENST00000265239.11	2232	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	16.7243080376691	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATCGTCACTTTGGTG	8	True	NA	-11	True	AATAAA	-24	NA	197959991	197889076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197959528_197959720_197959844
transcript_103046.known	chr3	-	1981	11	FSM	ENSG00000114473.14	ENST00000455191.5	1981	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	3.78021163428716	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATCGTCACTTTGGTG	-20	True	NA	-11	True	AATAAA	-24	NA	197949925	197889076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197949838
transcript_10306.nic	chr1	+	1187	3	NIC	ENSG00000169241.19	novel	1003	4	NA	NA	85	0	intron_retention	FALSE	canonical	3	79	junction_1	175	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	90	False	NA	12	True	AATAAA	-17	NA	155135981	155138851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_155136377_155137978_155138099_155138179
transcript_10307.known	chr1	+	596	3	FSM	ENSG00000169241.19	ENST00000484027.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	210	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTTGGGAGGCCAAGG	32	False	NA	NA	False	NA	NA	NA	155136315	155138574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155136397_155137978_155138099_155138179
transcript_10308.known	chr1	+	1245	5	FSM	ENSG00000169241.19	ENST00000622581.4	1245	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	167.616191043706	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTCATTCTCTACTCAT	1	True	NA	18	True	AATAAA	-23	NA	155135811	155138857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135973_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_10309.known	chr1	-	486	2	FSM	ENSG00000179085.8	ENST00000341298.3	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	NA	False	NA	-4	True	ATTAAA	-20	NA	155140595	155139890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155140272_155140490
transcript_10310.known	chr1	-	517	1	FSM	ENSG00000179085.8	ENST00000368399.1	517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	870	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	130	False	NA	-4	True	ATTAAA	-20	NA	155140407	155139890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155139900_155140400
transcript_10311.known	chr1	-	396	2	FSM	ENSG00000179085.8	ENST00000368400.5	396	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	3586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	6	True	NA	-4	True	ATTAAA	-20	NA	155140531	155139890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155140246_155140490
transcript_103116.known	chr3	-	3250	2	FSM	ENSG00000114473.14	ENST00000493624.1	3250	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAT	-16	True	NA	NA	False	AAAACA	-14	NA	197960015	197956640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197959720_197959844
transcript_103119.known	chr3	+	442	5	FSM	ENSG00000182899.17	ENST00000429437.5	442	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5802.8209949989	104669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	16	False	NA	14	True	AATAAA	-25	NA	197950205	197955817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197950222_197950935_197950979_197951158_197951329_197954002_197954148_197955749
transcript_103120.known	chr3	+	553	5	FSM	ENSG00000182899.17	ENST00000448864.6	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_1	4873.50471298633	99205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	0	True	NA	48	True	ATTAAA	-18	NA	197950189	197955851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197950300_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_103121.known	chr3	-	1481	4	FSM	ENSG00000114473.14	ENST00000478903.5	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	5.43650214343336	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTATCGTCACTTTGGT	-4	True	NA	-12	True	AATAAA	-23	NA	197913284	197889077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674
transcript_103122.known	chr3	+	564	5	FSM	ENSG00000182899.17	ENST00000439255.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7064.38378416688	2943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	429	False	NA	14	True	AATAAA	-25	NA	197950953	197955817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197950979_197951158_197951312_197953487_197953661_197954002_197954148_197955749
transcript_103123.known	chr3	+	579	3	FSM	ENSG00000182899.17	ENST00000496582.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	8100	junction_1	3656.5	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATAATAAACAAAAGATT	3	True	NA	NA	False	NA	NA	NA	197950192	197951665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197950222_197950935_197950979_197951158
transcript_103124.known	chr3	+	2423	17	FSM	ENSG00000185621.11	ENST00000420910.6	2423	17	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_16	6.47591692349431	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAACCACCTCATCAGC	-8	True	NA	NA	False	NA	NA	NA	197960221	198039011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197960441_197974376_197974475_197975041_197975073_197976028_197976112_197976597_197976716_197980325_197980505_197983942_197984049_197985795_197985891_197990558_197990677_197996174_197996283_197999265_197999343_198003014_198003126_198019252_198019386_198021445_198021606_198024657_198024789_198035832_198036044_198038566
transcript_103129.nnic	chr3	+	875	4	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4197	350	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	6.12825877028341	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTTGTCTTTGCTAT	NA	False	NA	NA	False	ATTAAA	-19	NA	198157483	198170409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_198157670_198167675_198167872_198169784_198169873_198170004
transcript_10313.known	chr1	+	3178	10	FSM	ENSG00000163462.19	ENST00000334634.9	3178	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	7.73320561835792	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAATCATTCCTGTGAGT	-27	True	NA	34	True	AATAAA	-34	NA	155173848	155184970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155174030_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_103130.known	chr4	+	2872	4	FSM	ENSG00000272602.6	ENST00000610261.6	2872	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	8.05536398239638	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAGTTAAATATGTAAA	-19	True	NA	NA	False	AATAAA	-23	NA	53320	88208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53492_59429_59557_60057_60154_85730
transcript_103132.known	chr4	+	747	3	FSM	ENSG00000272602.6	ENST00000502981.2	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	8	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAATACGTAAGGTGAG	-11	True	NA	NA	False	NA	NA	NA	53328	60514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53492_59429_59557_60057
transcript_103134.known	chr4	+	1999	2	FSM	ENSG00000272602.6	ENST00000608255.2	1999	2	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTATTATTTTTCTT	NA	False	NA	11	True	AATAAA	-23	NA	53285	87523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53492_85730
transcript_103135.known	chr4	+	2115	3	FSM	ENSG00000272602.6	ENST00000609518.5	2115	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTTGTATTATTTTTC	NA	False	NA	9	True	AATAAA	-21	NA	53294	87521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53492_59429_59557_85730
transcript_103138.known	chr4	+	1199	5	FSM	ENSG00000250312.8	ENST00000642529.1	1199	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	22.0963797939844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCCTGTCTTGGGTATC	-10	True	NA	NA	False	ATTAAA	-18	NA	124500	202303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_124674_130787_130915_131409_131506_201080_201212_201631
transcript_10314.known	chr1	-	804	8	FSM	ENSG00000185499.17	ENST00000368390.7	804	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.65892813567591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	9236	False	NA	NA	False	NA	NA	NA	155192867	155186122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188232_155192182_155192284_155192785
transcript_103145.nnic	chr4	+	1236	4	NNC	ENSG00000250312.8	novel	3647	4	NA	NA	-54	-11880	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	21.9291789378647	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGCTTCAGCAGTCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	124446	150821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_124674_130787_130915_131409_131506_150035
transcript_103146.known	chr4	+	3647	4	FSM	ENSG00000250312.8	ENST00000510175.6	3647	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	4.02768199119819	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTGGACATCTGGC	-10	True	NA	NA	False	AATAAA	-22	NA	124500	164162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_124674_130787_130915_131409_131506_160911
transcript_103152.known	chr4	+	2772	4	FSM	ENSG00000250312.8	ENST00000609714.1	2772	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	19.9053315024448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTTTGACATTAGAGAA	27	False	NA	NA	False	AAGAAA	-22	NA	124537	162701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_125297_130787_130915_131409_131506_160911
transcript_103155.nnic	chr4	+	1565	4	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	-33	-27990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	8.2192186706253	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGCAAATGAAAATTGT	0	True	NA	NA	False	ATTAAA	-16	NA	124467	134711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_125297_126847_126922_127007_127128_134169
transcript_103158.nic	chr4	+	1098	3	ISM	ENSG00000250312.8	ENST00000510175.6	3647	4	-54	32009	-54	-30548	5prime_fragment	FALSE	canonical	3	45	junction_1	4	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGGCAGAGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	124446	132153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_124674_130787_130915_131409
transcript_10316.known	chr1	-	1032	8	FSM	ENSG00000185499.17	ENST00000368392.7	1032	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.65892813567591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGGGCTCATGCCTG	9210	False	NA	NA	False	NA	NA	NA	155192893	155185947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188232_155192182_155192311_155192785
transcript_103161.nic	chr4	+	1716	3	ISM	ENSG00000250312.8	ENST00000609714.1	2772	4	-86	30548	-49	-30548	5prime_fragment	FALSE	canonical	2	7	junction_1	23	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGGCAGAGGTTGTG	NA	False	NA	NA	False	NA	NA	NA	124451	132153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_125297_130787_130915_131409
transcript_10317.known	chr1	-	859	8	FSM	ENSG00000185499.17	ENST00000337604.6	859	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.65892813567591	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	9235	False	NA	NA	False	NA	NA	NA	155192868	155186122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188286_155192182_155192284_155192785
transcript_103170.known	chr4	+	2598	2	FSM	ENSG00000198155.5	ENST00000356347.3	2598	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATGCAAGTTCACA	-19	True	NA	NA	False	TATAAA	-15	NA	212609	255985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_212782_253559
transcript_103173.nnic	chr4	-	1021	5	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-52	14276	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	47.7722461268046	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCTTTAAATTCAGAATG	NA	False	NA	-14	True	ATTAAA	-26	NA	305526	256398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_256879_266163_266263_295437_295534_296028_296156_305307
transcript_103176.nnic	chr4	-	705	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-52	51613	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	43.8710230866191	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTTTAAGATGTGGAA	NA	False	NA	-9	True	AATAAA	-24	NA	305526	219061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_219325_295437_295534_296028_296156_305307
transcript_103177.nnic	chr4	-	717	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-52	37665	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_1	39.6316371938716	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGAATTTATTTGATGA	NA	False	NA	-4	True	AATAAA	-16	NA	305526	233009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_233285_295437_295534_296028_296156_305307
transcript_103179.nnic	chr4	-	1485	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-52	23664	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	25.5081686262787	154	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTATACTCTTTCCCT	NA	False	NA	-9	True	TTTAAA	-6	NA	305526	247010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_248054_295437_295534_296028_296156_305307
transcript_103180.nnic	chr4	-	704	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-52	22883	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	25.5081686262787	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTGCCTTTAGTCTC	NA	False	NA	NA	False	NA	NA	NA	305526	247791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_248054_295437_295534_296028_296156_305307
transcript_103181.known	chr4	-	1132	2	FSM	ENSG00000286705.1	ENST00000653800.1	1132	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTCGTTCCATTTTGC	-22	True	NA	NA	False	AATAAA	-25	NA	337433	307334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_308232_337198
transcript_103183.nnic	chr4	+	1436	5	NNC	ENSG00000131127.14	novel	1611	5	NA	NA	-21	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	33.4551939166402	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTCCTGTTTTTCATTC	-15	True	NA	26	True	AATAAA	-17	NA	337792	383972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_337987_343781_343909_344334_344431_372663_372805_383094
transcript_103184.known	chr4	+	720	4	FSM	ENSG00000131127.14	ENST00000503699.1	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	36.1201698039567	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCATTTTATTTTTCT	-3	True	NA	NA	False	NA	NA	NA	337832	358550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_343781_343909_344334_344431_358207
transcript_103185.known	chr4	+	12601	4	FSM	ENSG00000131127.14	ENST00000240499.8	12601	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	13.1233464566864	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGATGTCTGTGTGCC	6	True	NA	NA	False	AATAAA	-20	NA	337813	384868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_343781_343909_344334_344431_372663
transcript_103188.known	chr4	+	2146	4	FSM	ENSG00000131127.14	ENST00000505939.5	2146	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	38.3869190682914	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTCTCTGATGTCTGTG	-2	True	NA	NA	False	AATAAA	-16	NA	337833	384864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_343781_343909_344334_344431_383094
transcript_103196.known	chr4	+	536	2	FSM	ENSG00000131127.14	ENST00000366506.4	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCTACACTTGTGAAGAA	6	True	NA	NA	False	NA	NA	NA	337813	373026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_372663
transcript_103197.known	chr4	-	142	1	FSM	ENSG00000250321.1	ENST00000506193.1	142	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTTTTCTGTAGTG	NA	False	NA	NA	False	NA	NA	NA	342962	342820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_342800_343000
transcript_103198.known	chr4	+	1611	5	FSM	ENSG00000131127.14	ENST00000512994.5	1611	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	33.8627745466906	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCCTGTTTTTCATT	12	True	NA	25	True	AATAAA	-16	NA	337819	383971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_343781_343909_344334_344431_372663_373008_383094
transcript_103208.known	chr4	-	4673	3	FSM	ENSG00000182903.16	ENST00000511833.3	4673	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCGTGAATGAAG	-7	True	NA	-4	True	AATAAA	-20	NA	499156	439987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_444433_472574_472702_499055
transcript_103218.known	chr4	-	4492	2	FSM	ENSG00000182903.16	ENST00000338977.5	4492	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCGTGAATGAAG	47	False	NA	-4	True	AATAAA	-20	NA	499102	439987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_444433_499055
transcript_103221.known	chr4	-	1815	3	FSM	ENSG00000251595.7	ENST00000451020.6	1815	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	139	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAAAAATGAGTTTTT	9	True	NA	NA	False	AATAAA	-21	NA	474129	425434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_426974_472574_472702_473980
transcript_103222.known	chr4	-	664	3	FSM	ENSG00000182903.16	ENST00000505900.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	29.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATGCTGGAGAGAA	-29	True	NA	NA	False	CATAAA	-1	NA	474167	444082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_444433_472574_472702_473980
transcript_103224.known	chr4	+	3909	13	FSM	ENSG00000174227.16	ENST00000453061.7	3909	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_11	32.4819394262241	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTACATTTTTACA	-33	True	NA	9	True	AATAAA	-20	NA	499209	540200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_10323.known	chr1	-	927	7	FSM	ENSG00000185499.17	ENST00000438413.5	927	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.80423740350444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGGGCTCATGCCTG	9210	False	NA	NA	False	NA	NA	NA	155192893	155185947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188055_155192182_155192284_155192785
transcript_103239.nic	chr4	+	1908	6	ISM	ENSG00000174227.16	ENST00000506402.5	2387	9	-34	5970	3	-5094	5prime_fragment	FALSE	canonical	3	82	junction_1	18.5256578830551	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAGGAATA	-19	True	NA	NA	False	NA	NA	NA	499223	516867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972
transcript_10324.known	chr1	-	648	7	FSM	ENSG00000185499.17	ENST00000343256.9	648	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.39696865275764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	9236	False	NA	NA	False	NA	NA	NA	155192867	155186122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155188007_155188064_155188162_155188213_155192182_155192284_155192785
transcript_103244.known	chr4	+	562	2	FSM	ENSG00000174227.16	ENST00000513679.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCACTCATCCTGCCACC	NA	False	NA	NA	False	NA	NA	NA	521756	522365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_521942_521988
transcript_103245.known	chr4	+	3203	13	FSM	ENSG00000174227.16	ENST00000310340.9	3203	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	38.3709959908957	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	-22	True	NA	7	True	AATAAA	-17	NA	499220	539529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521250_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_103246.known	chr4	+	1394	2	FSM	ENSG00000174227.16	ENST00000508144.1	1394	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATAATGTTTTACATTTT	NA	False	NA	5	True	AATAAA	-16	NA	533631	540196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_533982_539152
transcript_103247.known	chr4	+	2387	9	FSM	ENSG00000174227.16	ENST00000506402.5	2387	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	43.8703701260885	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCATCTTTACTTTTGAC	15	True	NA	19	True	AATAAA	-15	NA	499257	522837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521228_521659_521853_522007
transcript_103248.known	chr4	+	3019	13	FSM	ENSG00000174227.16	ENST00000504346.5	3019	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	39.4956924514841	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGTATCATATTTTC	-6	True	NA	6	True	AATAAA	-16	NA	499236	539528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_499299_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_103249.known	chr4	+	661	2	FSM	ENSG00000174227.16	ENST00000515237.1	661	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	NA	False	NA	7	True	AATAAA	-17	NA	536704	539529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_536989_539152
transcript_103253.known	chr4	+	580	6	FSM	ENSG00000133256.13	ENST00000471824.6	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.5409765834348	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAGCCCAAGAAAATG	56	False	NA	NA	False	NA	NA	NA	663769	670193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_670045
transcript_103283.known	chr4	+	584	7	FSM	ENSG00000215375.6	ENST00000505477.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.9930538323682	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACCCTGCCTGCGAGT	34	False	NA	17	True	AATAAA	-9	NA	673940	682022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_673978_678657_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
transcript_103289.known	chr4	-	300	3	FSM	ENSG00000169020.10	ENST00000505852.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	5763.5	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-2	True	NA	-14	True	AATAAA	-19	NA	674330	672437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302_673402_674211
transcript_103291.known	chr4	-	303	4	FSM	ENSG00000169020.10	ENST00000304312.5	303	4	0	0	0	0	multi-exon	FALSE	canonical	3	9537	junction_3	1016.96705944686	41839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-7	True	NA	-12	True	AATAAA	-21	NA	674276	672435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302_673402_673911_673967_674211
transcript_103292.known	chr4	-	393	3	FSM	ENSG00000169020.10	ENST00000515202.5	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	11622	junction_1	69	2371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	7844	False	NA	-12	True	AATAAA	-21	NA	674121	672435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302_673402_673911
transcript_103293.known	chr4	-	496	3	FSM	ENSG00000169020.10	ENST00000506525.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5806	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	8144	False	NA	-14	True	AATAAA	-19	NA	673821	672437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302_673402_673506
transcript_103294.known	chr4	+	531	2	FSM	ENSG00000215375.6	ENST00000503612.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTGCGAGTCTGCCG	2410	False	NA	23	True	AATAAA	-15	NA	680745	682028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_681141_681892
transcript_103295.known	chr4	+	731	7	FSM	ENSG00000215375.6	ENST00000513662.1	731	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.004628915401	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACCCAGCCGGGTCAA	3387	False	NA	-15	True	NA	NA	NA	677953	681990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_678030_678657_678766_678957_679174_679913_680019_680508_680588_681091_681141_681892
transcript_103297.nic	chr4	+	1741	12	NIC	ENSG00000185619.18	novel	3609	13	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	31	junction_3	28.4906828325413	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTCCATTAACATTAT	-11	True	NA	23	True	TATAAA	-26	NA	705775	766608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_705971_730629_730669_730969_731111_732399_732499_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_103301.known	chr4	+	1652	11	FSM	ENSG00000185619.18	ENST00000470161.6	1652	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.3475568143353	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTCCATTAACATTAT	-3	True	NA	23	True	TATAAA	-26	NA	705783	766608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_705971_730629_730669_730951_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_103305.nic	chr4	+	1222	5	ISM	ENSG00000185619.18	ENST00000440452.5	3609	13	-107	33385	4	0	intron_retention	FALSE	canonical	3	31	junction_3	31.3926743046845	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	0	True	NA	9	True	AATAAA	-22	NA	705835	734479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_705971_730629_730669_730969_731111_732399_732499_733671
transcript_103308.known	chr4	+	1175	4	FSM	ENSG00000185619.18	ENST00000400151.6	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	26.1661358757205	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	-3	True	NA	9	True	AATAAA	-22	NA	705783	734479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_705971_730629_730669_730969_731111_733671
transcript_103313.nnic	chr4	-	630	3	FSM	ENSG00000249592.7	ENST00000691800.1	619	3	-8	-3	-8	3	multi-exon	FALSE	canonical	1	1	junction_1	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGCCTTATTCATAATC	5096	False	NA	1	True	CATAAA	-20	NA	781874	777051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_777421_780530_780689_781771
transcript_103315.known	chr4	-	531	2	FSM	ENSG00000249592.7	ENST00000503571.5	531	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTGCTGGTGGCCCAG	-2	True	NA	NA	False	NA	NA	NA	781849	762386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_762840_781771
transcript_103316.known	chr4	-	534	2	FSM	ENSG00000249592.7	ENST00000507446.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAAAACGCCCTTCCAG	17	True	NA	NA	False	NA	NA	NA	781830	767140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_767616_781771
transcript_103318.known	chr4	+	1899	1	FSM	ENSG00000185619.18	ENST00000620529.1	1899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAAAGTGTTTCTGGCT	NA	False	NA	10	True	AATAAA	-17	NA	768188	770087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_768200_770100
transcript_103319.known	chr4	+	3609	13	FSM	ENSG00000185619.18	ENST00000440452.5	3609	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	42.7180679962628	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACACATACTGCTGAA	35	False	NA	3	True	AATAAA	-18	NA	705942	767864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_705971_730629_730669_730969_731111_732399_732499_733671_733790_733883_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031_766406_766673
transcript_103320.known	chr4	-	618	2	FSM	ENSG00000249592.7	ENST00000503185.5	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATGGGCGAGGCTGGAA	-2	True	NA	NA	False	AAAACA	-41	NA	781849	780148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_780689_781771
transcript_103321.known	chr4	-	4461	28	FSM	ENSG00000178950.18	ENST00000314167.9	4461	28	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	39.8246499480438	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTCCAGTGTGG	-8	True	NA	-3	True	ATTAAA	-15	NA	932316	849276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_103326.nnic	chr4	-	663	2	NIC	ENSG00000145217.14	novel	1111	3	NA	NA	4241	82	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCTGCTTGTGCTAT	6482	False	NA	NA	False	AATAAA	-21	NA	986954	978990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_979505_986805
transcript_103337.known	chr4	-	528	3	FSM	ENSG00000178222.13	ENST00000514024.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGAGCATACATGTGATAT	NA	False	NA	-4	True	AATAAA	-20	NA	1058427	1056249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1056504_1056837_1057005_1058320
transcript_103338.known	chr4	-	1019	4	FSM	ENSG00000178222.13	ENST00000333673.5	1019	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.24264068711928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTCTTAATTTCTAATA	19	True	NA	NA	False	AATAAA	-16	NA	1113530	1093307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1094015_1096764_1096840_1108342_1108405_1113355
transcript_103339.known	chr4	-	1579	6	FSM	ENSG00000159674.12	ENST00000290902.10	1579	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	1.85472369909914	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGGCTGTCCCCACA	-1	True	NA	-19	True	AATAAA	-23	NA	1172583	1166931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1167657_1170401_1170577_1170998_1171191_1171262_1171487_1171851_1172075_1172543
transcript_103341.nic	chr4	-	2350	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	152	junction_9	351.906904075215	675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	685	False	NA	-19	True	AATAAA	-15	NA	1248740	1211447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
transcript_103350.known	chr4	+	2182	9	FSM	ENSG00000090316.16	ENST00000303400.9	2182	9	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_4	43.9912988555692	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTGAGCCGAGGCT	-4	True	NA	37	True	AATAAA	-45	NA	1289890	1340137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_103352.known	chr4	+	1607	9	FSM	ENSG00000090316.16	ENST00000510794.5	1607	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	225.840651787937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGATGCTTCTGAA	NA	False	NA	NA	False	AAAACA	-30	NA	1309442	1339384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1309713_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_103355.known	chr4	+	2058	8	FSM	ENSG00000090316.16	ENST00000264750.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	247.856772334017	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTGTGAGCCGAGGC	-4	True	NA	36	True	AATAAA	-44	NA	1289890	1340136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_103358.nic	chr4	+	1546	3	ISM	ENSG00000163945.19	ENST00000679192.1	3869	15	-15	37085	-15	-4431	5prime_fragment	FALSE	canonical	2	6	junction_1	19.5	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTGTGAACTTACAGACG	-17	True	NA	NA	False	NA	NA	NA	1347043	1350783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_1347230_1348089_1348190_1349523
transcript_103359.known	chr4	-	579	2	FSM	ENSG00000244459.3	ENST00000466692.2	853	2	274	0	211	0	multi-exon	FALSE	canonical	2	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCTGGTGTGCAGT	216	False	NA	-7	True	NA	NA	NA	1580253	1574061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1574545_1580157
transcript_10336.known	chr1	-	619	6	FSM	ENSG00000185499.17	ENST00000467134.5	619	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	9236	False	NA	NA	False	NA	NA	NA	155192867	155186122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155188162_155188213_155192182_155192311_155192785
transcript_103360.known	chr4	-	1810	8	FSM	ENSG00000163950.13	ENST00000489418.6	1810	8	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_7	27.2021907881235	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGCCTTTCTTGTG	-2	True	NA	-5	True	NA	NA	NA	1712319	1692730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
transcript_103361.known	chr4	-	1030	6	FSM	ENSG00000163950.13	ENST00000483348.5	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	184.984972362622	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAACCATGTAATCCAT	9317	False	NA	NA	False	NA	NA	NA	1712018	1693243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1711873
transcript_103362.known	chr4	+	2799	16	FSM	ENSG00000013810.21	ENST00000313288.9	2799	16	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	94.2158278752685	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAAGCCGCTCTGGTCT	18	True	NA	30	True	AATAAA	-20	NA	1721520	1745171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1727707_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_103363.known	chr4	+	1732	15	FSM	ENSG00000013810.21	ENST00000612220.5	1732	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	207.115379950995	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACACTGAAGCCGC	-3	True	NA	22	True	AATAAA	-12	NA	1721499	1745163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_103366.known	chr4	+	914	2	FSM	ENSG00000013810.21	ENST00000652002.1	914	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACATCACTTCAGACTAA	16	False	NA	NA	False	AAAACA	-2	NA	1712857	1715945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1713166_1715339
transcript_103367.known	chr4	-	5371	14	FSM	ENSG00000168924.15	ENST00000302787.3	5371	14	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_11	23.8183460691009	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCAGAGTAATAATATT	-19	True	NA	-5	True	ATTAAA	-24	NA	1856156	1811478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1814574_1815663_1815803_1816726_1816915_1819337_1819473_1822180_1822313_1822987_1823132_1823643_1823776_1825563_1825684_1832743_1832948_1834844_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
transcript_103368.known	chr4	+	7560	22	FSM	ENSG00000109685.19	ENST00000508803.6	7560	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	77.3101360938987	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTTAACTTATTTTA	-7	True	NA	13	True	ATTAAA	-15	NA	1871392	1982192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140_1918624_1930625_1930771_1935143_1935263_1938450_1938533_1939653_1939779_1951071_1951204_1952107_1952232_1953323_1953525_1955160_1955341_1955692_1955850_1955982_1956189_1957932_1958037_1959470_1959741_1961034_1961152_1974862_1975005_1975293_1975401_1976474_1976680_1978637
transcript_103369.known	chr4	+	2092	5	FSM	ENSG00000109685.19	ENST00000508355.5	2092	5	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_4	30.3263499287336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCACAGAGGGAAGTGG	10	True	NA	NA	False	NA	NA	NA	1871453	1919187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1871543_1900625_1901252_1904215_1904379_1916870_1917038_1918140
transcript_103372.known	chr4	-	2198	11	FSM	ENSG00000185049.16	ENST00000382882.9	2198	11	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_3	24.7394421925799	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATAGCTGTGTTTGG	-5	True	NA	-12	True	ATTAAA	-21	NA	2008974	1982722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543_1991716_2008749
transcript_103378.known	chr4	-	792	4	FSM	ENSG00000185049.16	ENST00000458616.1	792	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCATATGCAGAACATG	236	False	NA	NA	False	TTTAAA	-17	NA	2008942	2003837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2004151_2006997_2007200_2007962_2008047_2008749
transcript_103379.nic	chr4	-	763	3	NIC	ENSG00000185049.16	novel	792	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCATATGCAGAACATG	181	False	NA	NA	False	TTTAAA	-17	NA	2008997	2003837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_2004151_2006997_2007200_2008749
transcript_103382.nic	chr4	-	538	2	ISM	ENSG00000185049.16	ENST00000443203.5	553	3	-25	15322	0	-3072	5prime_fragment	FALSE	canonical	3	4	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGTAAGAGTGTCTT	181	False	NA	-9	True	TTTAAA	-16	NA	2008997	2006909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_2007200_2008749
transcript_103386.known	chr4	-	5879	6	FSM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	44.3558338891289	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	4	True	NA	NA	False	NA	NA	NA	2242121	2228348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241791_2242050
transcript_103391.known	chr4	-	5620	5	FSM	ENSG00000214367.9	ENST00000243706.8	5620	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	61.4750965839014	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-8	True	NA	NA	False	NA	NA	NA	2242133	2228348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2242050
transcript_103394.known	chr4	-	3871	6	FSM	ENSG00000123933.17	ENST00000337190.7	3871	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	29.5607848339654	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-5	True	NA	-3	True	TATAAA	-20	NA	2262109	2247431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
transcript_1034.known	chr1	-	446	2	FSM	ENSG00000116213.16	ENST00000479331.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAAACTCCAACGTAG	9108	False	NA	NA	False	TTTAAA	-1	NA	3650061	3647245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3647561_3649930
transcript_103404.known	chr4	+	2921	8	FSM	ENSG00000063978.16	ENST00000314289.13	2921	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	312.750666812777	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTACACATTCATTT	-21	True	NA	17	True	AATAAA	-20	NA	2469105	2515857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_103406.known	chr4	+	855	8	FSM	ENSG00000063978.16	ENST00000502316.5	855	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	348.243932803852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGAAGTATTCAGAGC	NA	False	NA	NA	False	AAAAAG	-29	NA	2469096	2513811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2469230_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_103418.known	chr4	-	2006	6	FSM	ENSG00000168884.15	ENST00000510267.5	2006	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	137.505490799459	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	16	True	NA	6	True	AATAAA	-34	NA	2756331	2741647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2755948
transcript_103419.known	chr4	-	1946	6	FSM	ENSG00000168884.15	ENST00000315423.12	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_2	38.270615359568	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	11	True	NA	6	True	AATAAA	-34	NA	2756336	2741647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2756013
transcript_103427.known	chr4	+	3107	16	FSM	ENSG00000087274.19	ENST00000513328.6	3107	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	298.367930954756	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGCTTTCTTCTTT	9	True	NA	NA	False	NA	NA	NA	2843972	2929307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926638_2926676_2928170
transcript_10343.known	chr1	-	598	5	FSM	ENSG00000163463.13	ENST00000491084.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	692.344567394011	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	5462	False	NA	-10	True	AATAAA	-15	NA	155173475	155169407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173316
transcript_103430.nic	chr4	+	3879	15	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	-26	0	intron_retention	FALSE	canonical	3	599	junction_14	122.586766439622	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	45	True	NA	14	True	AATAAA	-14	NA	2843918	2930062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_103432.known	chr4	+	4045	15	FSM	ENSG00000087274.19	ENST00000264758.11	4045	15	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_10	264.053565994261	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	-17	True	NA	25	True	AATAAA	-25	NA	2843856	2930073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_103436.known	chr4	+	1569	9	FSM	ENSG00000087274.19	ENST00000509039.5	1569	9	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_7	36.4312280193792	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCAGGTATTTAGGCT	15	True	NA	NA	False	NA	NA	NA	2843978	2899777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258
transcript_103438.known	chr4	+	546	2	FSM	ENSG00000087274.19	ENST00000540541.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	1055	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTAGCTTAGGCTGG	25	True	NA	NA	False	ATTAAA	-2	NA	2843988	2876405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2844025_2875895
transcript_103440.known	chr4	+	3787	14	FSM	ENSG00000087274.19	ENST00000398129.5	3787	14	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_13	126.100598518586	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGAAGCAGTTTTATAT	7816	False	NA	28	True	AATAAA	-28	NA	2875895	2930076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_103443.known	chr4	-	1589	13	FSM	ENSG00000109736.15	ENST00000503596.5	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	210.458362205502	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTTTGTTTTATACC	6	True	NA	-26	True	AATAAA	-1	NA	2934816	2930582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932410_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_103448.known	chr4	-	1717	13	FSM	ENSG00000109736.15	ENST00000355443.9	1717	13	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_12	114.770059975007	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	-3	True	NA	-10	True	AATAAA	-17	NA	2934825	2930566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_103454.nic	chr4	-	1858	12	NIC	ENSG00000109736.15	novel	1717	13	NA	NA	-19	0	intron_retention	FALSE	canonical	3	409	junction_11	117.058931262974	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	-31	True	NA	-4	True	AATAAA	-23	NA	2934853	2930560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_103459.known	chr4	-	1573	12	FSM	ENSG00000109736.15	ENST00000507555.1	1573	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	226.644221867192	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCAGGTTTCTGATGAT	-12	True	NA	15	True	TTTAAA	-4	NA	2934834	2930610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_103478.known	chr4	-	2173	12	FSM	ENSG00000109736.15	ENST00000329687.8	2173	12	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_9	78.0164212423966	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAAGTGCCTTTCGCCA	7980	False	NA	-11	True	AATAAA	-16	NA	2934458	2930567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_103479.known	chr4	-	1776	11	FSM	ENSG00000109736.15	ENST00000514800.5	1776	11	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_8	79.7095351887088	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	8491	False	NA	-4	True	AATAAA	-23	NA	2933947	2930560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_103481.known	chr4	-	2723	17	FSM	ENSG00000087269.16	ENST00000502735.5	2723	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.493472561931	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATTATAAATGAAACAAG	24	True	NA	23	True	NA	NA	NA	2963356	2937951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2938328_2939534_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_103482.known	chr4	-	2535	17	FSM	ENSG00000087269.16	ENST00000398071.4	2535	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	37.0185236570828	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGATCGGGAATGGT	47	True	NA	-14	True	AATAGA	-18	NA	2963333	2938112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2938328_2939538_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_103486.nnic	chr4	+	769	5	FSM	ENSG00000249673.8	ENST00000685071.1	761	5	-12	4	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.79021822544144	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCAGCAGGAAGTGG	-38	True	NA	2	True	AATAAA	-15	NA	2934881	2940504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2935087_2937751_2937845_2937974_2938143_2938692_2938793_2940301
transcript_103487.known	chr4	+	2541	5	FSM	ENSG00000249673.8	ENST00000658490.1	2541	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.06828373317832	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGCCACACCAGCAG	-13	True	NA	-5	True	AATAAA	-8	NA	2934906	2940497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2936891_2937751_2937845_2937974_2938143_2938692_2938793_2940301
transcript_103490.known	chr4	-	3556	18	FSM	ENSG00000087269.16	ENST00000416614.7	3556	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	14.4705882352941	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-26	True	NA	-25	True	TATAAA	-6	NA	2963406	2937935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_103494.known	chr4	+	2136	2	FSM	ENSG00000125388.20	ENST00000503518.2	2136	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCCCTCCCTCTCTGGTC	29	False	NA	NA	False	AATAGA	-16	NA	2963633	2966889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2964123_2965242
transcript_103496.known	chr4	+	781	3	FSM	ENSG00000197386.14	ENST00000506137.1	781	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCTGGGCATGGTG	2466	False	NA	NA	False	NA	NA	NA	3115328	3121712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_3115446_3116084_3116264_3121227
transcript_103499.known	chr4	-	10446	8	FSM	ENSG00000163956.13	ENST00000650182.1	10446	8	0	0	0	0	multi-exon	TRUE	canonical	3	904	junction_4	46.5639783699015	2125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTCTTTGATCCAT	-1	True	NA	-14	True	NA	NA	NA	3532422	3503611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_3513037_3514751_3514929_3516115_3516199_3518033_3518193_3518870_3518992_3520071_3520194_3524906_3525052_3532208
transcript_1035.known	chr1	-	1998	11	FSM	ENSG00000116213.16	ENST00000378322.7	1998	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	15.1208465371486	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTTGAAACGTTT	9111	False	NA	0	True	AATAAA	-23	NA	3650058	3630766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_10350.known	chr1	-	271	4	FSM	ENSG00000163463.13	ENST00000461136.5	271	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	787.328535125091	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCACAGGCAAGAGCAAGAA	25	True	NA	-72	True	NA	NA	NA	155173257	155169469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155173208
transcript_103524.known	chr4	-	741	4	FSM	ENSG00000251669.6	ENST00000510565.5	741	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.7480157480236	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTTACTGTGCAGCAGG	22	False	NA	NA	False	NA	NA	NA	3955408	3942910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_3943373_3948089_3948221_3953110_3953174_3955323
transcript_103528.nnic	chr4	+	655	3	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	14	True	AATAAA	-22	NA	3927574	3933044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_3927695_3927845_3927996_3932659
transcript_103530.nnic	chr4	+	1007	3	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_2	44.5	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	14	True	AATAAA	-22	NA	3927651	3933044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_3927996_3929642_3929921_3932659
transcript_103541.known	chr4	-	624	3	FSM	ENSG00000251669.6	ENST00000507301.5	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGGCGACACCTGGA	67	False	NA	NA	False	NA	NA	NA	3955363	3942851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_3943373_3953110_3953174_3955323
transcript_103545.nnic	chr4	+	771	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	0	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	14	True	AATAAA	-22	NA	3927609	3933044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_3927996_3932659
transcript_10356.known	chr1	+	3195	11	NNC	ENSG00000163462.19	novel	3178	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.3137084989848	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATCATTCCTGTGAGTT	4272	False	NA	35	True	AATAAA	-35	NA	155173786	155184971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_155174030_155174600_155174642_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177270_155178067_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_103560.known	chr4	-	2276	2	FSM	ENSG00000284727.1	ENST00000641316.1	2276	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAAAATTTCTCTCTT	NA	False	NA	-14	True	NA	NA	NA	4107583	4048210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4050183_4107279
transcript_103561.nnic	chr4	-	625	2	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	-21	6141	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTCTGAATTTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	4107604	4101138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_4101439_4107279
transcript_103563.known	chr4	-	1737	5	FSM	ENSG00000132406.12	ENST00000254742.6	1737	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	137.190333114254	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	5	True	NA	-6	True	AATAAA	-17	NA	4248212	4235541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4247600
transcript_103564.known	chr4	-	1243	5	FSM	ENSG00000132406.12	ENST00000382753.5	1243	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	42.9592830480212	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-6	True	NA	-6	True	AATAAA	-17	NA	4248223	4235541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_103567.known	chr4	-	1554	10	FSM	ENSG00000145220.14	ENST00000343470.9	1554	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	31.6290224592603	2731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	6	True	NA	0	True	AATAAA	-26	NA	4290154	4267700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_103568.known	chr4	-	1468	10	FSM	ENSG00000145220.14	ENST00000452476.5	1468	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	115.062731145951	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTTGTGGCAAAAAT	139	False	NA	-3	True	AATAAA	-23	NA	4290021	4267703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4289985
transcript_103579.known	chr4	-	2158	11	FSM	ENSG00000168818.10	ENST00000306200.7	2158	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_4	23.7915951545919	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGGCCTCTGCAC	3	True	NA	NA	False	AATAAA	-20	NA	4542048	4418967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4420130_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
transcript_103583.known	chr4	+	2650	6	FSM	ENSG00000168824.15	ENST00000397958.5	2650	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	95.6460140309046	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	523	False	NA	12	True	AATAAA	-14	NA	4386255	4419058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4386644_4387118_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_103588.known	chr4	+	2254	5	FSM	ENSG00000168824.15	ENST00000433139.6	2254	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	51.8814754994497	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTTACATGTAACTT	-3	True	NA	-47	True	NA	NA	NA	4386537	4418999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4386644_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_103594.known	chr4	+	4172	9	FSM	ENSG00000168824.15	ENST00000421177.6	4172	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	113.318067292908	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	44	False	NA	12	True	AATAAA	-14	NA	4348139	4419058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4348472_4380982_4381074_4385059_4385202_4385472_4385556_4385856_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_103599.known	chr4	+	980	4	FSM	ENSG00000168824.15	ENST00000504171.1	980	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	97.9807237277936	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGGGTAACAGTGC	1	True	NA	132	True	NA	NA	NA	4387104	4417879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4387174_4387603_4387759_4409572_4409684_4417234
transcript_1036.known	chr1	+	506	4	FSM	ENSG00000235169.11	ENST00000642557.4	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	10.6770782520313	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	-2	True	NA	32	True	AATAAA	-35	NA	3772748	3775956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_3772789_3773062_3773182_3775298_3775484_3775794
transcript_10362.known	chr1	-	572	2	FSM	ENSG00000185499.17	ENST00000620770.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCGGACACCAGGCCGG	0	True	NA	NA	False	NA	NA	NA	155192909	155191862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155192311_155192785
transcript_103626.known	chr4	+	1405	3	FSM	ENSG00000247708.8	ENST00000512438.6	1405	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATATATATGTGAAATAT	3	True	NA	-39	True	NA	NA	NA	4542198	4592031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542476_4544737_4544908_4591073
transcript_10363.known	chr1	-	785	4	FSM	ENSG00000163463.13	ENST00000487350.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_3	13.6950923894494	3466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	5699	False	NA	-10	True	AATAAA	-15	NA	155173238	155169407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737
transcript_103631.nnic	chr4	+	1098	3	NNC	ENSG00000247708.8	novel	724	3	NA	NA	6	6630	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTTTGCGCTGTGTG	-19	True	NA	NA	False	AATAAA	-21	NA	4542136	4569544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_4542427_4544737_4544908_4568906
transcript_103634.nnic	chr4	+	1291	3	NNC	ENSG00000247708.8	novel	3167	3	NA	NA	0	6630	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	11.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGTTTTGCGCTGTGTG	-13	True	NA	NA	False	AATAAA	-21	NA	4542142	4569544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_4542626_4544737_4544908_4568906
transcript_103638.known	chr4	+	3539	3	FSM	ENSG00000247708.8	ENST00000664283.1	3539	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAACATGTTGTGATTCT	-13	True	NA	NA	False	NA	NA	NA	4542142	4708558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542626_4544737_4544908_4705672
transcript_103639.known	chr4	+	3167	3	FSM	ENSG00000247708.8	ENST00000663324.1	3167	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAAAAATTTCATGATG	-13	True	NA	NA	False	NA	NA	NA	4542142	4562907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542626_4544737_4544908_4560393
transcript_10364.known	chr1	-	578	4	FSM	ENSG00000163463.13	ENST00000471891.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	1183	junction_3	229.858410524586	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	31	True	NA	-11	True	AATAAA	-14	NA	155173251	155169408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172893_155173220
transcript_103640.known	chr4	+	2590	3	FSM	ENSG00000247708.8	ENST00000659678.1	2590	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTAAACCTCTTTCTCTT	17	True	NA	-21	True	NA	NA	NA	4542172	4552475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542626_4544737_4544908_4550508
transcript_103642.known	chr4	+	1048	1	FSM	ENSG00000280310.1	ENST00000624794.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTCTTCATAAATTAC	NA	False	NA	-10	True	ATTAAA	-2	NA	4820404	4821452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4820400_4821500
transcript_103644.nnic	chr4	-	1139	5	NNC	ENSG00000170891.11	novel	989	4	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	18.2208671582886	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	NA	False	NA	0	True	AATAAA	-21	NA	5019493	5014585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_5015235_5016835_5016965_5017134_5017180_5018240_5018356_5019292
transcript_10365.known	chr1	-	414	3	FSM	ENSG00000163463.13	ENST00000482246.5	414	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	588.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	14	True	NA	-11	True	AATAAA	-14	NA	155173268	155169408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169620_155172737_155172893_155173220
transcript_103651.known	chr4	-	553	2	FSM	ENSG00000170891.11	ENST00000506508.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATGTTTTTATTACTG	48	False	NA	NA	False	NA	NA	NA	5019437	5014826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5015235_5019292
transcript_103652.known	chr4	-	989	4	FSM	ENSG00000170891.11	ENST00000307746.9	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	8.48528137423857	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-2	True	NA	0	True	AATAAA	-21	NA	5019458	5014585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5015235_5016835_5016965_5017134_5017180_5019292
transcript_103656.nnic	chr4	+	1012	6	NNC	ENSG00000072840.13	novel	523	2	NA	NA	-151	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	17.2348484182484	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTTGCGGCGCTTTGT	NA	False	NA	11	True	AATAAA	-19	NA	5752523	5758311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_5752730_5752835_5753053_5753784_5753934_5756263_5756363_5757454_5757565_5758080
transcript_103657.nnic	chr4	+	763	5	NNC	ENSG00000072840.13	novel	523	2	NA	NA	-229	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	15.8173164601332	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTTGCGGCGCTTTGT	NA	False	NA	11	True	AATAAA	-19	NA	5752445	5758311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_5752513_5752835_5753053_5753784_5753934_5756263_5756363_5758080
transcript_10366.known	chr1	-	1107	7	FSM	ENSG00000185499.17	ENST00000338684.9	1107	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	3.80423740350444	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGATCTTTCATCTG	-6	True	NA	-6	True	AATAAA	-21	NA	155192915	155185825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155192182_155192311_155192785
transcript_103661.nic	chr4	+	977	4	ISM	ENSG00000072840.13	ENST00000509451.1	1960	12	41340	0	-120	0	3prime_fragment	FALSE	canonical	3	6	junction_3	13.9124245031395	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTTGCGGCGCTTTGT	NA	False	NA	11	True	AATAAA	-19	NA	5752554	5758311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_5753053_5753784_5753934_5756263_5756363_5758080
transcript_103663.known	chr4	-	3081	14	FSM	ENSG00000072832.15	ENST00000511535.1	3081	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	170.979807797752	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGACTAGGGCACTTTCA	5369	False	NA	-24	True	AATAAA	-20	NA	5887813	5820783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5887388
transcript_103664.known	chr4	-	2911	14	FSM	ENSG00000072832.15	ENST00000397890.6	2911	14	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	43.689192738367	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTAGGGCACTTTCAT	-19	True	NA	-23	True	AATAAA	-21	NA	5888481	5820782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5888227
transcript_103665.known	chr4	-	2764	14	FSM	ENSG00000072832.15	ENST00000512574.1	2764	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	167.622109513134	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGTCCACACTAGAAAG	2991	False	NA	NA	False	NA	NA	NA	5890191	5821242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5889624
transcript_10367.known	chr1	-	477	5	FSM	ENSG00000163463.13	ENST00000497317.5	477	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	676.116299167532	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	28	True	NA	-10	True	AATAAA	-15	NA	155173254	155169407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169786_155169858_155172564_155172629_155172737_155172893_155173220
transcript_103670.nic	chr4	+	751	3	ISM	ENSG00000013288.9	ENST00000504248.5	2968	19	-15	42533	-15	-31220	5prime_fragment	FALSE	canonical	3	33	junction_2	4.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGTTGTGAGTATTAAA	-17	True	NA	NA	False	GATAAA	-30	NA	6575173	6578821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_6575349_6576577_6576725_6578392
transcript_103671.nic	chr4	+	803	3	ISM	ENSG00000013288.9	ENST00000504248.5	2968	19	-15	42481	-15	-31168	5prime_fragment	FALSE	canonical	3	33	junction_2	4.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTTCCCTAGTAAATG	-17	True	NA	NA	False	AATAAA	-15	NA	6575173	6578873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_6575349_6576577_6576725_6578392
transcript_103673.known	chr4	+	563	3	FSM	ENSG00000179010.16	ENST00000507420.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGAGAGCCTTTTGTTTT	-3	True	NA	NA	False	NA	NA	NA	6640685	6641791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6640756_6640827_6641259_6641729
transcript_103675.known	chr4	+	1982	1	FSM	ENSG00000179010.16	ENST00000512914.1	1982	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGTTAATAAAAGTATT	25	False	NA	-13	True	AAAACA	-12	NA	6640713	6642695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6640700_6642700
transcript_103676.known	chr4	+	1574	2	FSM	ENSG00000179010.16	ENST00000382581.5	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	0	5044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	-4	True	NA	21	True	AATAAA	-21	NA	6640684	6642729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6641259_6641729
transcript_10368.known	chr1	+	1864	9	FSM	ENSG00000163462.19	ENST00000368385.8	1864	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	8.78830899547803	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGGCCAGGCAAGGT	2	True	NA	NA	False	AATAAA	-14	NA	155173877	155180621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155174030_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155180434
transcript_103681.known	chr4	+	2311	2	FSM	ENSG00000170846.17	ENST00000307533.10	2311	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTCCTTGATAGTGGTC	2	True	NA	9	True	AATAAA	-16	NA	6673450	6676047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6674707_6674992
transcript_103682.known	chr4	-	406	2	FSM	ENSG00000251580.3	ENST00000513179.1	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGTTTCGAGGTGAACA	277	False	NA	-1	True	AATAAA	-16	NA	6673823	6670727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6670994_6673683
transcript_103683.known	chr4	+	471	2	FSM	ENSG00000163993.7	ENST00000296370.4	471	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGTCTCAGAGAAACTG	-4	True	NA	NA	False	AATAAA	-15	NA	6693877	6697170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6694071_6696892
transcript_103686.known	chr4	-	1578	2	FSM	ENSG00000178988.11	ENST00000320848.7	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	2144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-7	True	NA	-14	True	AATAAA	-16	NA	6709865	6707700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6708644_6709230
transcript_103687.known	chr4	-	2127	1	FSM	ENSG00000178988.11	ENST00000500563.2	2127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	422	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	31	False	NA	-14	True	AATAAA	-16	NA	6709827	6707700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6707700_6709800
transcript_103688.known	chr4	+	1491	1	FSM	ENSG00000186222.5	ENST00000320776.5	1491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTACGTATTTCCTTG	3	True	NA	51	True	AATAGA	-39	NA	6716173	6717664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6716200_6717700
transcript_103689.known	chr4	+	418	2	FSM	ENSG00000287331.1	ENST00000666330.1	418	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGATTCTTTCCCTCT	-7	True	NA	NA	False	CATAAA	-23	NA	6763507	6767660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6763713_6767447
transcript_10369.known	chr1	-	3145	23	FSM	ENSG00000169231.13	ENST00000368378.7	3145	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.557438524302	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	20	True	NA	-3	True	CATAAA	-19	NA	155207897	155195587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155203512_155203540_155204854_155204958_155205059_155205317_155206199_155206407_155207797
transcript_103691.known	chr4	+	7771	9	FSM	ENSG00000170871.12	ENST00000425103.5	7771	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	5.13413819447821	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGTTCCATCAAGTT	3	True	NA	19	True	AATAAA	-22	NA	6782731	6884170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6782842_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6871573_6871683_6876659_6876758_6880786
transcript_103692.known	chr4	+	7854	10	FSM	ENSG00000170871.12	ENST00000307659.6	7854	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.7094453801669	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAACATAAGTTCCAT	-2	True	NA	13	True	AATAAA	-16	NA	6782726	6884164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6782842_6804522_6804607_6824184_6824685_6842066_6842205_6857163_6857231_6858424_6858507_6860900_6864184_6871573_6871683_6876659_6876758_6880786
transcript_103695.known	chr4	+	4887	14	FSM	ENSG00000132405.19	ENST00000448507.5	4887	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	86.4933557663014	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCACCATCGTTTGTTTA	188	False	NA	27	True	AATAAA	-24	NA	6909443	7033118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6909506_6923372_6924112_6967303_6967425_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_1037.nnic	chr1	+	481	3	NIC	ENSG00000235169.11	novel	506	4	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	32.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	0	True	NA	32	True	AATAAA	-35	NA	3772654	3775956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_3772789_3775298_3775484_3775794
transcript_103701.known	chr4	-	1111	1	FSM	ENSG00000287104.1	ENST00000664676.1	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	356	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGAGTGGATCTCATG	1	True	NA	-12	True	ATTAAA	-14	NA	6987036	6985925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6985900_6987000
transcript_103705.known	chr4	-	2653	4	FSM	ENSG00000109519.13	ENST00000264954.5	2653	4	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_2	14.8548533034381	2497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCCCCTCATTGACT	-4	True	NA	-1	True	AGTAAA	-25	NA	7068064	7058894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_7061209_7062384_7062467_7064060_7064224_7067970
transcript_103706.known	chr4	-	2195	3	FSM	ENSG00000109519.13	ENST00000504920.5	2195	3	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	16	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGTTTGGCTACCTGG	-4	True	NA	-22	True	AATAAA	-12	NA	7068064	7060528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_7062467_7064060_7064224_7067970
transcript_103710.known	chr4	+	579	1	FSM	ENSG00000250471.2	ENST00000514075.2	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTCTTGTTCTATTAA	NA	False	NA	NA	False	NA	NA	NA	8174420	8174999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8174400_8175000
transcript_103711.known	chr4	-	2253	18	FSM	ENSG00000087008.16	ENST00000503233.5	2253	18	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_17	33.3929110020422	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACTGGCACACATTCAG	7475	False	NA	NA	False	NA	NA	NA	8428486	8366960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_103719.nnic	chr4	-	2504	18	NNC	ENSG00000087008.16	novel	2872	18	NA	NA	4663	0	at_least_one_novel_splicesite	FALSE	canonical	3	186	junction_17	42.6491277388625	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGCCGTGGGTTTTTTGAT	4665	False	NA	-25	True	AAGAAA	-24	NA	8436060	8366711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8435922
transcript_103735.known	chr4	+	2874	11	FSM	ENSG00000155275.19	ENST00000389737.5	2874	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGCCACTCTAAGTGGC	-15	True	NA	18	True	AATAAA	-20	NA	8440776	8476555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8441442_8446475_8446591_8449668_8449889_8451959_8452029_8452881_8452990_8454741_8454814_8463984_8464092_8465377_8465562_8467913_8468347_8471083_8471201_8475771
transcript_103747.nic	chr4	-	1429	4	NIC	ENSG00000087008.16	novel	2253	18	NA	NA	-171	-3917	intron_retention	FALSE	canonical	3	233	junction_3	57.5982252813015	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAAGAGGCCTGTCCA	7304	False	NA	NA	False	AAGAAA	-11	NA	8428657	8414198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_8414929_8415765_8416000_8416377_8416536_8428350
transcript_103753.nnic	chr4	+	1996	3	NNC	ENSG00000155275.19	novel	770	2	NA	NA	-1761	983	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	69	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	NA	False	NA	28	True	AATAAA	-17	NA	8434378	8440284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_8434648_8436165_8436400_8438791
transcript_103756.nnic	chr4	+	606	2	NNC	ENSG00000155275.19	novel	770	2	NA	NA	-52	-236	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAATAGTTTTCCTGTAA	NA	False	NA	12	True	AGTAAA	-19	NA	8436087	8439065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_8436400_8438771
transcript_103758.nnic	chr4	+	1825	2	NNC	ENSG00000155275.19	novel	770	2	NA	NA	-52	983	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	NA	False	NA	28	True	AATAAA	-17	NA	8436087	8440284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_8436400_8438771
transcript_103760.known	chr4	+	770	2	FSM	ENSG00000155275.19	ENST00000532937.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTCATTCTTTAAACAC	0	True	NA	NA	False	NA	NA	NA	8436139	8439301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8436400_8438791
transcript_103761.known	chr4	+	2163	11	FSM	ENSG00000109625.19	ENST00000360986.9	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	32.63571663071	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	-13	True	NA	31	True	ATTAAA	-18	NA	8592764	8619752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8592922_8599452_8599486_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_103762.known	chr4	+	2464	11	FSM	ENSG00000109625.19	ENST00000515606.1	2464	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	53.4419311028335	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTGGAATGAGAGGATC	74	False	NA	30	True	ATTAAA	-17	NA	8592725	8619751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8592922_8599452_8599583_8600956_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_103765.known	chr4	+	2136	10	FSM	ENSG00000109625.19	ENST00000315782.6	2136	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	48.297688005397	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	-22	True	NA	28	True	ATTAAA	-15	NA	8592755	8619749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8592922_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_103769.nnic	chr4	+	667	2	Genic_Genomic	ENSG00000284636.1	novel	218	1	NA	NA	-144	6194	multi-exon	FALSE	canonical	2	11	junction_1	0	49	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	NA	False	NA	5	True	AATAAA	-19	NA	9000696	9007252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr4_+_9001059_9006947
transcript_103778.nnic	chr4	-	2273	5	NNC	ENSG00000288075.1	novel	1440	3	NA	NA	-286	0	intron_retention	FALSE	canonical	0	0	junction_2	11.842719282327	84	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCTATACTTTGT	NA	False	NA	-13	True	NA	NA	NA	9152561	9034518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_9035546_9064241_9064331_9144723_9144867_9151094_9151440_9151892
transcript_103798.nnic	chr4	-	1965	3	NIC	ENSG00000288075.1	novel	1440	3	NA	NA	-196	14	intron_retention	FALSE	canonical	0	0	junction_1	10	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCTGTGTCTGATT	NA	False	NA	1	True	NA	NA	NA	9152471	9034504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_9035546_9151094_9151440_9151892
transcript_1038.known	chr1	-	4303	7	FSM	ENSG00000130764.10	ENST00000378251.3	4303	7	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_1	21.9063664008637	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCAGATCCTTTCCCA	-1	True	NA	71	True	AATAAA	-17	NA	3796498	3778558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3785086_3785204_3786848_3787311_3795861
transcript_103809.nnic	chr4	+	619	2	Genic_Genomic	ENSG00000284648.1	novel	219	1	NA	NA	-100	6144	multi-exon	FALSE	canonical	3	20	junction_1	0	109	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTGAATTTTATTT	NA	False	NA	6	True	AATAAA	-14	NA	9532328	9538791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr4_+_9532648_9538491
transcript_103810.nic	chr4	-	1693	10	NIC	ENSG00000109667.12	novel	1864	12	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.56347191994114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGCAACTGTGTTAGCAT	9827	False	NA	NA	False	ATTAAA	-30	NA	10019281	9826223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_9826601_9834880_9835009_9887566_9887643_9890609_9890712_9908234_9908346_9920384_9920573_9941912_9942046_9980591_9980738_9985668_9985794_10018974
transcript_103811.known	chr4	-	567	3	FSM	ENSG00000109667.12	ENST00000505506.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGGCATTTCCCTCAT	2444	False	NA	NA	False	AATAAA	-25	NA	10019075	9995668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_9995974_9996780_9996942_10018974
transcript_103812.known	chr4	-	3142	15	FSM	ENSG00000071127.17	ENST00000382452.6	3142	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	363.346190404733	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	22	False	NA	-8	True	ATTAAA	-15	NA	10116949	10074339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
transcript_103818.known	chr4	-	2722	12	FSM	ENSG00000071127.17	ENST00000382451.6	2722	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	526.01500465668	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	22	False	NA	-8	True	ATTAAA	-15	NA	10116949	10074339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_103822.known	chr4	-	1691	12	FSM	ENSG00000071127.17	ENST00000502702.5	1691	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	526.01500465668	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGGAGCATAACTAAAA	20	True	NA	-5	True	AATAAA	-17	NA	10116727	10075148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_103823.known	chr4	-	527	2	FSM	ENSG00000178163.8	ENST00000507515.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTACAGGGAAGGACGGTA	6	True	NA	NA	False	NA	NA	NA	10457405	10446101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10446540_10457316
transcript_103824.known	chr4	-	4196	2	FSM	ENSG00000178163.8	ENST00000503068.1	4196	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTATTCTTTTCTGT	1	True	NA	NA	False	AATAAA	-29	NA	10457410	10450886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10454989_10457316
transcript_103825.known	chr4	-	2623	3	FSM	ENSG00000178163.8	ENST00000515072.1	2623	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTATTCTTTTCTGT	3	True	NA	NA	False	AATAAA	-29	NA	10457408	10450886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10453023_10454593_10454989_10457316
transcript_103826.nnic	chr4	+	787	4	NNC	ENSG00000287778.2	novel	4065	3	NA	NA	-485	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.942809041582063	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATACCCCAGTATTCTGT	64	False	NA	NA	False	TATAAA	-7	NA	11429159	11438505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_11429381_11433190_11433320_11434320_11434416_11438163
transcript_103827.nnic	chr4	+	775	3	NNC	ENSG00000287778.2	novel	3714	4	NA	NA	-602	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATACCCCAGTATTCTGT	NA	False	NA	NA	False	TATAAA	-7	NA	11429042	11438505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_11429381_11434320_11434416_11438163
transcript_103828.known	chr4	-	7160	2	FSM	ENSG00000002587.10	ENST00000002596.6	7160	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGATGTCTCTTTCTT	-8	True	NA	NA	False	GATAAA	-19	NA	11428894	11393149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_11400114_11428698
transcript_103831.nnic	chr4	+	818	4	NNC	ENSG00000249631.7	novel	555	4	NA	NA	36211	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	3.55902608401044	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGCTATTTTTCTTC	NA	False	NA	17	True	AATAAA	-22	NA	11806630	11813958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_11806892_11808627_11808826_11811996_11812109_11813711
transcript_103833.nnic	chr4	+	706	3	NNC	ENSG00000249631.7	novel	555	4	NA	NA	36211	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	2	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGCTATTTTTCTTC	NA	False	NA	17	True	AATAAA	-22	NA	11806630	11813958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_11806892_11808627_11808826_11813711
transcript_103835.nnic	chr4	+	1075	3	NNC	ENSG00000249631.7	novel	555	4	NA	NA	37690	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGCTATTTTTCTTC	1393	False	NA	17	True	AATAAA	-22	NA	11808109	11813958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_11808826_11811996_11812109_11813711
transcript_103836.nic	chr4	+	764	3	ISM	ENSG00000249631.7	ENST00000668579.1	1270	6	99709	0	51748	0	3prime_fragment	FALSE	canonical	2	7	junction_2	1	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGTCTGTGCTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	11822167	11823906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_11822475_11823038_11823209_11823619
transcript_103837.nnic	chr4	+	803	3	NNC	ENSG00000249631.7	novel	1270	6	NA	NA	51748	21820	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	3	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCCCTGATCATATGA	NA	False	NA	NA	False	AAAAAG	-7	NA	11822167	11845726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_11822475_11823038_11823209_11845400
transcript_103840.nnic	chr4	+	793	3	NNC	ENSG00000249631.7	novel	1270	6	NA	NA	51748	27312	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCCTCCGTTAAGATAGA	NA	False	NA	NA	False	AATAAA	-13	NA	11822167	11851218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_11822475_11823038_11823209_11850902
transcript_103841.nnic	chr4	+	719	3	NNC	ENSG00000249631.7	novel	1270	6	NA	NA	51764	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGTCTGTGCTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	11822183	11823906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_11822475_11823067_11823209_11823619
transcript_103851.known	chr4	-	1690	7	FSM	ENSG00000157869.16	ENST00000330852.10	1690	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	41.7708697007323	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-10	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_103852.known	chr4	-	1785	8	FSM	ENSG00000157869.16	ENST00000288723.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	112.979138403007	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-10	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_103853.known	chr4	-	1551	6	FSM	ENSG00000157869.16	ENST00000508274.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	134.076992806372	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-1	True	NA	-11	True	AATAAA	-14	NA	13484331	13367723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_103854.known	chr4	-	1787	8	FSM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	158.384188037847	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	611	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13371794_13371868_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_103855.known	chr4	-	1679	7	FSM	ENSG00000157869.16	ENST00000630951.1	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	146.137397297505	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	611	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_103856.known	chr4	-	10567	26	FSM	ENSG00000038219.13	ENST00000040738.10	10567	26	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_24	35.0765106588441	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGTGGTAAGAATTTTA	-29	True	NA	-19	True	TATAAA	-21	NA	13627725	13568737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13570129_13576837_13576992_13577402_13577488_13577581_13577632_13579927_13579974_13581019_13581055_13581131_13581208_13582236_13582311_13582651_13582737_13586395_13586476_13587698_13587772_13588721_13588793_13590385_13590447_13591922_13591967_13595859_13595945_13597103_13597169_13598945_13605085_13607116_13607190_13608529_13608669_13609294_13609407_13610933_13611101_13613511_13613662_13614195_13614811_13615311_13615503_13619942_13620068_13627344
transcript_103870.nnic	chr4	-	398	3	NNC	ENSG00000249252.5	novel	630	6	NA	NA	-51136	-118163	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTATCTGTAAGTGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	15279096	15124609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_15124843_15263396_15263465_15278999
transcript_103874.known	chr4	+	5184	37	FSM	ENSG00000048342.18	ENST00000424120.6	5184	37	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.51591647054698	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCAAAGTGTTCTATTT	-8	True	NA	8	True	AATAAA	-20	NA	15469881	15601552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15540836_15541015_15550823_15550981_15553157_15553306_15555071_15555211_15557303_15557508_15559164_15559258_15560530_15560623_15563354_15563523_15567376_15567483_15567676_15567787_15569292_15569390_15570397_15570497_15574149_15574327_15579967_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15596084_15596208_15597406_15597466_15599528_15599707_15601236
transcript_103875.known	chr4	+	4989	35	FSM	ENSG00000048342.18	ENST00000506643.5	4989	35	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	7.93403818605105	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTGCAAAGTGTTCTA	13	False	NA	5	True	AATAAA	-17	NA	15479203	15601549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15540836_15541015_15550823_15550981_15553157_15553306_15555071_15555211_15557303_15557508_15559164_15559258_15560530_15560623_15563354_15563523_15567376_15567483_15567676_15567787_15569292_15569390_15570397_15570497_15574149_15574327_15579967_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15596084_15596208_15597406_15597466_15599528_15599707_15601236
transcript_103877.nic	chr4	+	1189	9	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-4	23474	-4	5130	5prime_fragment	FALSE	canonical	3	22	junction_6	8.95474734428616	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTCTGAATAGCTT	-13	True	NA	NA	False	ATTAAA	-15	NA	15479211	15516802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624
transcript_103879.known	chr4	+	1121	8	FSM	ENSG00000048342.18	ENST00000514450.3	1121	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	16.0165730493417	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	31	False	NA	9	True	ATTAAA	-37	NA	15469920	15511672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_103881.nic	chr4	+	1252	6	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-296	28604	-284	0	5prime_fragment	FALSE	canonical	3	29	junction_5	6.01996677731696	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	9030	False	NA	9	True	ATTAAA	-37	NA	15478919	15511672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_103882.nnic	chr4	+	911	6	NNC	ENSG00000048342.18	novel	3427	15	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	17.4080441175912	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	0	True	NA	9	True	ATTAAA	-37	NA	15479190	15511672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511316
transcript_103883.known	chr4	+	1521	5	FSM	ENSG00000048342.18	ENST00000515124.6	1521	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1.4790199457749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTCATATGGCTGTTT	NA	False	NA	5	True	AATAAA	-14	NA	15469864	15482259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15481196
transcript_103885.known	chr4	+	754	3	FSM	ENSG00000048342.18	ENST00000652443.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAGATATTC	-9	True	NA	NA	False	AATAAA	-18	NA	15479215	15481713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15479329_15480703_15480828_15481196
transcript_103890.known	chr4	-	2951	12	FSM	ENSG00000118564.15	ENST00000511441.5	2951	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	218.131774563864	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	2	True	NA	-1	True	AATAAA	-28	NA	15655341	15605005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15641523_15641628_15644492_15644709_15655203
transcript_103894.known	chr4	-	2837	11	FSM	ENSG00000118564.15	ENST00000412094.6	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	149.142381635805	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-39	True	NA	-1	True	AATAAA	-28	NA	15655382	15605005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644658_15655203
transcript_103895.known	chr4	-	3488	11	FSM	ENSG00000118564.15	ENST00000341285.8	3488	11	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_9	31.8447797919847	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTATGTTCTGATTG	-14	True	NA	NA	False	GATAAA	-1	NA	15655357	15604380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644709_15655203
transcript_1039.nnic	chr1	-	1663	5	NNC	ENSG00000130764.10	novel	4303	7	NA	NA	-2967	915	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	243.928780589745	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTTGTGTAAAGACTCT	9355	False	NA	-3	True	AATAAA	-16	NA	3787142	3780219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3786905
transcript_103905.known	chr4	+	635	4	FSM	ENSG00000237765.8	ENST00000504823.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	23.6971634495683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATTATGAAACCTTAAGT	-7	True	NA	NA	False	AATGAA	-35	NA	15681668	15688694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681785_15686235_15686463_15687000_15687149_15688550
transcript_103910.known	chr4	+	578	4	FSM	ENSG00000237765.8	ENST00000503600.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	16.6599986661331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAATTGAGCTAAACTTG	-3	True	NA	NA	False	AAAACA	-40	NA	15681834	15688619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681969_15686235_15686463_15687000_15687149_15688550
transcript_103914.known	chr4	+	1136	4	FSM	ENSG00000237765.8	ENST00000505260.5	1136	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	96.6965471059966	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAACAAAAATTTAATGAA	-1	True	NA	136	True	AATAAA	-16	NA	15681755	15689096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15686235_15686463_15686931_15687149_15688550
transcript_103917.known	chr4	+	607	4	FSM	ENSG00000237765.8	ENST00000515697.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	71.7975548949189	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAATCAATAATTGAGCTA	-6	True	NA	NA	False	AAAACA	-34	NA	15681732	15688613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15686235_15686463_15687000_15687149_15688550
transcript_10392.known	chr1	+	592	2	FSM	ENSG00000231064.8	ENST00000454348.1	563	2	267	-296	267	0	multi-exon	FALSE	canonical	2	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTGGTCTTTGTTGG	3332	False	NA	NA	False	AATGAA	-12	NA	155198426	155200571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155198619_155200171
transcript_103922.known	chr4	+	958	4	FSM	ENSG00000237765.8	ENST00000502856.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	11.0252236056942	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTGTATTTCTTA	23	False	NA	12	True	AATAAA	-14	NA	15681860	15688972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15682022_15686235_15686463_15687000_15687149_15688550
transcript_103925.known	chr4	+	559	4	FSM	ENSG00000237765.8	ENST00000508567.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	36.8510515453766	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAGTGCAAGACGTTA	-13	True	NA	NA	False	AAAAAG	-4	NA	15681824	15687145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15684849_15684960_15686235_15686463_15687000
transcript_103928.known	chr4	+	662	3	FSM	ENSG00000237765.8	ENST00000510920.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	29	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTATTGATAAGCCTC	-14	True	NA	NA	False	ATTAAA	-25	NA	15681661	15687312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681785_15686235_15686463_15687000
transcript_103929.known	chr4	+	654	3	FSM	ENSG00000237765.8	ENST00000512855.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	53	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAGTGCAAGACGTTA	-1	True	NA	NA	False	AAAAAG	-4	NA	15681755	15687145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681969_15686235_15686463_15686931
transcript_10393.known	chr1	-	768	2	FSM	ENSG00000169231.13	ENST00000498500.1	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	5661	False	NA	-3	True	CATAAA	-19	NA	155196442	155195587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155195900_155195986
transcript_103930.known	chr4	+	431	3	FSM	ENSG00000237765.8	ENST00000510186.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	6.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTAAGTGCAAGAC	68	False	NA	NA	False	NA	NA	NA	15681905	15687141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681969_15686235_15686463_15687000
transcript_103934.known	chr4	+	524	3	FSM	ENSG00000237765.8	ENST00000514803.1	524	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	20.5	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	-15	True	NA	5	True	AATAAA	-16	NA	15681822	15686606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15684885_15684960_15686235
transcript_103936.known	chr4	+	800	3	FSM	ENSG00000237765.8	ENST00000507305.5	800	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	68.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAACACAGCTGCTGAAA	-5	True	NA	NA	False	NA	NA	NA	15681790	15687462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15686235_15686463_15687000
transcript_10394.known	chr1	+	1085	8	FSM	ENSG00000173171.15	ENST00000609421.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_3	48.6964776834579	3726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTCAAACATTTTCTCC	5	True	NA	NA	False	AATAAA	-16	NA	155209246	155213824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212126_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_103940.known	chr4	+	748	3	FSM	ENSG00000237765.8	ENST00000513053.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	7	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCTGAACTTATTGAT	10	True	NA	NA	False	ATTAAA	-18	NA	15681805	15687305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15682022_15686235_15686463_15687000
transcript_103944.known	chr4	+	588	3	FSM	ENSG00000237765.8	ENST00000502502.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTCTAAAAAACAAAAT	0	True	NA	-33	True	AATGAA	-2	NA	15681756	15686568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15684849_15684960_15686235
transcript_103946.known	chr4	+	444	3	FSM	ENSG00000237765.8	ENST00000507992.5	444	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATACAAGTCAACAGTC	0	True	NA	NA	False	GATAAA	-21	NA	15681795	15686396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681969_15684849_15684960_15686235
transcript_10395.known	chr1	+	2579	7	FSM	ENSG00000173171.15	ENST00000481771.5	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_5	38.9001570976548	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	9	True	NA	NA	False	AATAAA	-15	NA	155209250	155213823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_103950.nic	chr4	+	521	2	ISM	ENSG00000237765.8	ENST00000510920.5	662	3	-27	706	-27	0	5prime_fragment	FALSE	canonical	3	42	junction_1	0	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	NA	False	NA	5	True	AATAAA	-16	NA	15681634	15686606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_15681785_15686235
transcript_103951.known	chr4	+	1027	2	FSM	ENSG00000237765.8	ENST00000503617.1	1027	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATCTGGAATTGTGAAT	0	True	NA	NA	False	AATATA	-25	NA	15681756	15687050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681969_15686235
transcript_103952.known	chr4	+	4287	2	FSM	ENSG00000237765.8	ENST00000422728.3	4287	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGAATAGCTCATA	-11	True	NA	5	True	AATAAA	-15	NA	15681826	15690447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15686235
transcript_103953.known	chr4	+	639	2	FSM	ENSG00000237765.8	ENST00000510032.5	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	-3	True	NA	5	True	AATAAA	-16	NA	15681753	15686606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15682022_15686235
transcript_103954.nnic	chr4	-	943	2	NNC	ENSG00000118564.15	novel	591	3	NA	NA	-66	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_1	0	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	NA	False	NA	-6	True	ATTAAA	-42	NA	15681745	15667563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_15668041_15681279
transcript_103955.nnic	chr4	-	876	2	NNC	ENSG00000118564.15	novel	532	4	NA	NA	-72	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	126	junction_1	0	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	NA	False	NA	-6	True	ATTAAA	-42	NA	15681751	15667563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_15668041_15681352
transcript_103956.nnic	chr4	-	678	2	NNC	ENSG00000118564.15	novel	741	5	NA	NA	-16	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	33	False	15681616	-6	True	ATTAAA	-42	NA	15681583	15667563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_15668041_15681382
transcript_103957.known	chr4	-	1351	3	FSM	ENSG00000137440.5	ENST00000382333.2	1351	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAACATTGCTTGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	15938740	15935576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15936653_15938250_15938472_15938686
transcript_10396.known	chr1	-	1873	11	FSM	ENSG00000160766.15	ENST00000368374.5	1873	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	26.9362209673146	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	9	True	NA	NA	False	NA	NA	NA	155227422	155213824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155214474_155214567_155214685_155215053_155215163_155215562_155215652_155215761_155215788_155216383_155216622_155216856_155217030_155217239_155217374_155217963_155218050_155224876_155225088_155227381
transcript_103961.known	chr4	-	4014	27	FSM	ENSG00000007062.12	ENST00000508167.5	4014	27	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_26	42.5147555311073	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTGTATGTTACTTC	-6	True	NA	-5	True	AATAAA	-16	NA	16083732	15968229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083664
transcript_103962.known	chr4	-	4349	27	FSM	ENSG00000007062.12	ENST00000505450.5	4349	27	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_26	28.9711139548859	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTATGTTACTTCCT	NA	False	NA	-3	True	AATAAA	-18	NA	16084378	15968227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
transcript_103971.known	chr4	-	1105	2	FSM	ENSG00000137441.8	ENST00000259989.7	1105	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGACTTTAGTCTTCTTAA	-2	True	NA	NA	False	AATAAA	-17	NA	15963175	15960244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15960612_15962437
transcript_103972.known	chr4	-	248	1	FSM	ENSG00000242358.1	ENST00000487122.1	248	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	344	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGAGAATCACGGATGT	9303	False	NA	NA	False	NA	NA	NA	16256555	16256307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_16256300_16256600
transcript_103975.known	chr4	-	2476	9	FSM	ENSG00000169744.13	ENST00000441778.6	2476	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	48.8964147458686	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	341	False	NA	-13	True	AATAAA	-18	NA	16898594	16501540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_16502874_16505839_16505983_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_103979.known	chr4	-	2295	8	FSM	ENSG00000169744.13	ENST00000515064.5	2295	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	42.1832735978204	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	4	True	NA	-13	True	AATAAA	-18	NA	16898562	16501540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_16502874_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_103981.known	chr4	-	2626	8	FSM	ENSG00000169744.13	ENST00000502640.5	2626	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	51.4265872633118	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCAAGTGAATCTGGC	22	True	NA	-18	True	AATAAA	-13	NA	16898634	16501545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_16503132_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_103990.nic	chr4	-	1131	7	ISM	ENSG00000169744.13	ENST00000304523.10	2384	8	-186	7100	-153	3344	5prime_fragment	FALSE	canonical	3	101	junction_1	20.7417989148054	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACCAGCAGCACTTCCA	104	False	NA	15	True	AAAAAG	-7	NA	16898831	16508640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_10401.nic	chr1	+	830	3	NIC	ENSG00000236675.1	novel	838	7	NA	NA	2085	123	intron_retention	FALSE	canonical	3	729	junction_1	71.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGGCTCAAACATTTTC	NA	False	NA	NA	False	AATAAA	-13	NA	155233059	155234448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_155233397_155233863_155234019_155234110
transcript_104010.nnic	chr4	-	1487	3	NNC	ENSG00000169744.13	novel	2295	8	NA	NA	-117	-25848	intron_retention	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCATTATTTGTCAT	0	True	NA	-8	True	AATAAA	-17	NA	16898795	16776697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_16777559_16778458_16778643_16898353
transcript_104018.known	chr4	-	1507	7	FSM	ENSG00000151552.12	ENST00000281243.10	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_4	33.4265363645911	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-2	True	NA	-3	True	AATAAA	-17	NA	17512090	17486394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_104023.known	chr4	-	1278	6	FSM	ENSG00000151552.12	ENST00000428702.6	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	177.018191155598	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAATCACATCTTATAT	2	True	NA	-16	True	AATAAA	-24	NA	17512086	17486526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17511949
transcript_104025.known	chr4	-	1374	6	FSM	ENSG00000151552.12	ENST00000507439.5	1374	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	196.33481606684	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGCCTGATTCTGC	-6	True	NA	-6	True	AATAAA	-14	NA	17512069	17486397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17487237_17490661_17490746_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_104033.known	chr4	-	601	5	FSM	ENSG00000151552.12	ENST00000508623.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	220.984586566575	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCAGAAAAGTCACTAAC	1	True	NA	NA	False	NA	NA	NA	17512087	17487104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17487237_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_104037.known	chr4	+	10858	4	FSM	ENSG00000118579.13	ENST00000237380.12	10858	4	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_3	60.3342541366198	3103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAGATGGATGTGTT	-1	True	NA	17	True	AATAAA	-30	NA	17614640	17634105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600
transcript_104038.known	chr4	+	879	6	FSM	ENSG00000118579.13	ENST00000503945.2	879	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	480.825373706505	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGTACAAAGAAAATTCA	22	False	NA	14	True	AATAAA	-22	NA	17614663	17628170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600_17623795_17625655_17625846_17628005
transcript_10404.known	chr1	-	2387	12	FSM	ENSG00000177628.16	ENST00000327247.9	2387	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	27.4262346505574	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-8	True	NA	NA	False	NA	NA	NA	155244670	155234451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085_155241181_155244505
transcript_10407.known	chr1	-	2291	11	FSM	ENSG00000177628.16	ENST00000368373.8	2291	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	17.3078017090559	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	2	True	NA	NA	False	NA	NA	NA	155241249	155234451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085
transcript_104070.known	chr4	-	4547	3	FSM	ENSG00000163257.11	ENST00000382247.6	4547	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	-29	True	NA	0	True	AATAAA	-24	NA	17810757	17800654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17804772_17805106_17805226_17810446
transcript_104073.known	chr4	-	757	2	FSM	ENSG00000163257.11	ENST00000507768.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCACAGTGGTATGGGCCA	-30	True	NA	NA	False	AATATA	-19	NA	17810758	17804311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17804757_17810446
transcript_104074.nnic	chr4	-	2061	2	NIC	ENSG00000163257.11	novel	4547	3	NA	NA	-8	1281	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAATTAGTTAAGGGGAC	-38	True	NA	NA	False	NA	NA	NA	17810766	17803030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_17804772_17810446
transcript_104079.nic	chr4	-	481	2	ISM	ENSG00000163257.11	ENST00000382247.6	4547	3	-34	4435	-33	-778	5prime_fragment	FALSE	canonical	3	51	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTTTATAGCTCTCT	1558	False	NA	NA	False	NA	NA	NA	17810791	17805089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_17805226_17810446
transcript_104080.known	chr4	-	533	2	FSM	ENSG00000163257.11	ENST00000507731.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGCATGTTTTAACC	17	True	NA	-8	True	AATAAA	-22	NA	17810711	17809424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17809693_17810446
transcript_104081.known	chr4	-	5604	7	FSM	ENSG00000178177.16	ENST00000326877.8	5604	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	48.7399562303182	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAATTTCAGATTTTTT	NA	False	NA	-23	True	AATAAA	-13	NA	18021876	17841198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17845902_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
transcript_104082.known	chr4	-	10430	8	FSM	ENSG00000178177.16	ENST00000635767.1	10430	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	71.7842572702172	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAATTTCAGATTTTTT	NA	False	NA	-23	True	AATAAA	-13	NA	18021876	17841198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17845902_17873387_17878214_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
transcript_104085.known	chr4	+	4587	21	FSM	ENSG00000109805.10	ENST00000251496.7	4587	21	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_6	45.1622353299745	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTATTCTGAGTATT	-7	True	NA	4	True	AATAAA	-14	NA	17810978	17844865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17840606_17840694_17842309_17842380_17843301
transcript_104105.known	chr4	+	795	3	FSM	ENSG00000109805.10	ENST00000513226.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCCTCAGAAGTAACTAT	42	False	NA	NA	False	AAAAAG	-33	NA	17811027	17813346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17811189_17812220_17812425_17812916
transcript_104108.known	chr4	+	483	1	FSM	ENSG00000241612.1	ENST00000488289.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGTGTTAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	19813748	19814231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_19813700_19814200
transcript_104109.known	chr4	-	2168	7	FSM	ENSG00000185774.16	ENST00000359001.9	2168	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTCTACTGTCTATGT	NA	False	NA	NA	False	AATAAA	-17	NA	20850779	20728615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_20730130_20732005_20732069_20732680_20732786_20734627_20734736_20749661_20749733_20758820_20758891_20850542
transcript_104120.known	chr4	+	1937	9	FSM	ENSG00000163138.19	ENST00000295290.12	1937	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.65336728815391	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATATTCAGCAATTAAA	1	True	NA	-30	True	NA	NA	NA	20700418	20728316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700618_20702140_20702222_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284
transcript_104122.known	chr4	+	1373	9	FSM	ENSG00000163138.19	ENST00000467997.6	1373	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	7.54983443527075	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAGTGATTAACTGA	21	False	NA	11	True	AATAAA	-7	NA	20700476	20752888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284_20727398_20752564
transcript_10413.known	chr1	-	1499	5	FSM	ENSG00000160767.22	ENST00000487649.5	1499	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	61.5243854093643	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACGTGTGCCTATGCAA	7241	False	NA	NA	False	NA	NA	NA	155255191	155247426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155253624_155253733_155254652
transcript_104134.known	chr4	+	2073	8	FSM	ENSG00000163138.19	ENST00000360916.9	2073	8	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_5	6.73704349860091	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGATTTTGTTGTGCT	-5	True	NA	11	True	ATTAAA	-22	NA	20700412	20728357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284
transcript_10414.nic	chr1	-	1208	4	ISM	ENSG00000160767.22	ENST00000368366.5	1962	7	1399	-12	1399	0	3prime_fragment	FALSE	canonical	3	123	junction_1	7.03957069398096	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGTCACCAGTGAAAT	8472	False	NA	-16	True	AATAAA	-30	NA	155250409	155247204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275
transcript_104156.known	chr4	+	1720	5	FSM	ENSG00000163138.19	ENST00000444671.6	1720	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	9.36416040016402	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGCAATTAAAATGTT	18	False	NA	-25	True	NA	NA	NA	20700435	20728321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20713431_20713540_20727284
transcript_104163.known	chr4	+	810	4	FSM	ENSG00000163138.19	ENST00000502938.5	810	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.0724477007517	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACAATTTTGAGGTTT	3	True	NA	NA	False	ATTAAA	-13	NA	20700458	20727542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20727284
transcript_104165.known	chr4	+	1233	9	FSM	ENSG00000163138.19	ENST00000506702.5	1233	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.87323926196065	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGACTTCTTGGAATC	3	True	NA	23	True	AATAAA	-19	NA	20700458	20752900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700618_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284_20727398_20752564
transcript_104166.known	chr4	-	4577	19	FSM	ENSG00000152990.14	ENST00000334304.10	4577	19	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_15	34.1971408811387	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	-21	True	NA	-1	True	AATAAA	-21	NA	22516066	22387375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
transcript_104168.known	chr4	-	1572	8	FSM	ENSG00000152990.14	ENST00000508133.5	1572	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	158.436493425535	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTGCTTCTTTATCA	-8	True	NA	NA	False	NA	NA	NA	22443135	22414193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_22414607_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22443079
transcript_104172.known	chr4	-	2998	14	FSM	ENSG00000109606.13	ENST00000336812.5	2998	14	0	0	0	0	multi-exon	FALSE	canonical	3	1104	junction_5	93.1059077565521	1910	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCAAAGCCCTTTGG	-13	True	NA	-28	True	AATAAA	-16	NA	24584554	24527474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_104173.known	chr4	+	2195	2	FSM	ENSG00000261121.2	ENST00000569621.1	2195	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGATGGCATCTTTTATT	NA	False	NA	5	True	AATAAA	-14	NA	24659855	24671568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_24660044_24669561
transcript_104175.known	chr4	-	3869	12	FSM	ENSG00000181982.19	ENST00000504487.5	3869	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	7.24654377577441	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACAGCTGTCTTTTGTCT	128	False	NA	-5	True	ATTAAA	-18	NA	24912886	24806116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_24808820_24819858_24819976_24822496_24822574_24831505_24831651_24834947_24835033_24836435_24836509_24837227_24837401_24838155_24838273_24853071_24853180_24873680_24873720_24876535_24876698_24912816
transcript_104178.nnic	chr4	-	655	3	NNC	ENSG00000181982.19	novel	3869	12	NA	NA	23	-69929	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCCGCTGCCCCTGAGT	83	False	NA	NA	False	AATAAA	-38	NA	24912931	24906364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_24906850_24910771_24910827_24912816
transcript_104179.known	chr4	-	5503	11	FSM	ENSG00000109618.13	ENST00000382103.7	5503	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	6.72606868832009	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTACGTTATTTTAC	127	False	25160476	-8	True	AATAAA	-41	NA	25160449	25120013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_25124226_25125693_25125785_25127263_25127358_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_104180.known	chr4	-	5441	10	FSM	ENSG00000109618.13	ENST00000680581.1	5441	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.0384048104053	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAGACTGTTTAAAGAT	26	False	NA	-77	True	NA	NA	NA	25160550	25120082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_25124226_25125693_25125785_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_104182.known	chr4	-	2072	5	FSM	ENSG00000109618.13	ENST00000681640.1	2072	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	5.80409338312195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATTAAATTTTAAAAC	113	False	NA	NA	False	NA	NA	NA	25160463	25153720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_104186.known	chr4	+	3594	10	FSM	ENSG00000038210.14	ENST00000264864.8	3594	10	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	22.973414586817	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	-4	True	NA	NA	False	ATTAAA	-18	NA	25234032	25279204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25234432_25252320_25252476_25255064_25255266_25256542_25256675_25259036_25259191_25260523_25260592_25263749_25263850_25268442_25268577_25269143_25269204_25277013
transcript_104188.known	chr4	+	383	2	FSM	ENSG00000281501.1	ENST00000510415.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGTCGGAATACTGG	-16	True	NA	16	True	ATTAAA	-17	NA	25160640	25161687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25160754_25161417
transcript_104190.known	chr4	+	4055	2	FSM	ENSG00000281501.1	ENST00000507794.2	4055	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTGCACACGCATGTT	15	True	NA	NA	False	NA	NA	NA	25160671	25201440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25160754_25197467
transcript_104193.known	chr4	+	2797	13	FSM	ENSG00000168228.16	ENST00000302874.9	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_12	24.0202460899597	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGCTCTCAGTTCTC	-17	True	NA	3	True	ATTAAA	-16	NA	25312773	25370383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021_25365167_25369028
transcript_104200.nic	chr4	+	1406	11	ISM	ENSG00000168228.16	ENST00000302874.9	2797	13	-13	5782	-13	-547	5prime_fragment	FALSE	canonical	3	77	junction_7	22.8070164642375	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAGTGTAGAGACTTGT	NA	False	NA	NA	False	TATAAA	-9	NA	25312760	25364601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453
transcript_104202.known	chr4	+	1504	9	FSM	ENSG00000168228.16	ENST00000505451.5	1504	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	43.6999713958716	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTACAAACATGTGCCA	-6	True	NA	NA	False	NA	NA	NA	25312784	25352541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25352073
transcript_104203.nic	chr4	+	1001	8	NNC	ENSG00000168228.16	novel	1504	9	NA	NA	-13	-2856	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	46.6314249827128	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	NA	False	NA	NA	False	AATAAA	-17	NA	25312760	25349685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333310_25333310_25333459_25333907_25333989_25345547_25345621_25349491
transcript_104204.nic	chr4	+	1002	7	ISM	ENSG00000168228.16	ENST00000505451.5	1504	9	-24	2856	-13	-2856	5prime_fragment	FALSE	canonical	3	94	junction_6	15.4533347713545	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	NA	False	NA	NA	False	AATAAA	-17	NA	25312760	25349685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491
transcript_104207.nnic	chr4	+	872	4	NNC	ENSG00000168228.16	novel	1504	9	NA	NA	-13	-33665	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	62.3110477095889	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTGACCCATTACCT	NA	False	NA	NA	False	AATAAA	-21	NA	25312760	25318876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_25312937_25314045_25314165_25315317_25315401_25318382
transcript_104208.known	chr4	+	938	11	NNC	ENSG00000168228.16	novel	2797	13	NA	NA	23	-2856	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	62.8274621483313	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	27	False	NA	NA	False	AATAAA	-17	NA	25312817	25349685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_25312937_25314045_25314165_25315317_25315394_25333178_25333286_25333286_25333296_25333296_25333303_25333303_25333310_25333310_25333459_25333907_25333989_25345547_25345621_25349491
transcript_104209.known	chr4	+	2599	29	FSM	ENSG00000053900.11	ENST00000510092.5	2599	29	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_18	59.0006377516552	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	-16	True	NA	5	True	AATAAA	-12	NA	25377292	25418489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405623_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_104211.known	chr4	-	3500	24	FSM	ENSG00000091490.11	ENST00000502949.5	3500	24	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_23	79.437412202733	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTACCCAGATCAGGCA	5971	False	NA	34	True	TTTAAA	-13	NA	25863537	25748265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_25748565_25757533_25757607_25757687_25757791_25758940_25759069_25765325_25765436_25767524_25767610_25767739_25767831_25776276_25776361_25779075_25779204_25782241_25782419_25784227_25784291_25788223_25788365_25790454_25790575_25802282_25802463_25804540_25804753_25818137_25818279_25819807_25819941_25821995_25822129_25830097_25830157_25832994_25833111_25833447_25833570_25835196_25835324_25847293_25847865_25863433
transcript_104218.known	chr4	+	773	3	FSM	ENSG00000250317.9	ENST00000515764.2	773	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	255	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAAGGTCCGGGTCTCTT	702	False	NA	NA	False	AATACA	-16	NA	25861829	25929545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25862154_25928312_25928370_25929153
transcript_104220.known	chr4	+	935	3	FSM	ENSG00000250317.9	ENST00000506197.3	919	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	510	junction_2	4	8547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTGGTGTCTTTTT	-32	True	NA	14	True	ATTAAA	-15	NA	25914203	25929812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25914423_25928312_25928370_25929153
transcript_104235.known	chr4	+	1878	13	FSM	ENSG00000168214.22	ENST00000679698.1	1878	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	489.509334833248	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTGATACTATTCAAAAA	9	True	NA	NA	False	AATGAA	-37	NA	26321021	26431116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26408059_26408175_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104239.known	chr4	+	1843	12	FSM	ENSG00000168214.22	ENST00000512671.6	1843	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	440.039536165138	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	393	False	NA	NA	False	NA	NA	NA	26319661	26431181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26319771_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_10424.nnic	chr1	-	1559	9	NNC	ENSG00000116521.11	novel	1545	9	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_5	190.969238360528	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	16	False	NA	-3	True	AATAAA	-23	NA	155262416	155255980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258913_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_104241.known	chr4	+	1992	12	FSM	ENSG00000168214.22	ENST00000342295.6	1992	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	438.433594206609	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	367	False	NA	NA	False	NA	NA	NA	26319635	26431186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26319889_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104245.known	chr4	+	1637	12	FSM	ENSG00000168214.22	ENST00000681025.1	1637	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	478.940324790828	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTCATACCAGGTGAT	-2	True	NA	NA	False	AAAAAG	-38	NA	26321010	26431104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26412929_26412988_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104254.known	chr4	+	1998	12	FSM	ENSG00000168214.22	ENST00000348160.9	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	323.438729236695	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTGTCTCCCTGCAAG	-21	True	NA	NA	False	NA	NA	NA	26320806	26431136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104257.known	chr4	+	2136	12	FSM	ENSG00000168214.22	ENST00000505958.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	385.928161002207	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTTTTTGCTAGGACT	143	False	NA	NA	False	NA	NA	NA	26321364	26431009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321872_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104261.known	chr4	+	1682	11	FSM	ENSG00000168214.22	ENST00000345843.8	1682	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	364.370964814706	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAAAAATGAACAATCG	441	False	NA	NA	False	AAAAAG	-12	NA	26319709	26431066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26319889_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104263.known	chr4	+	5395	11	FSM	ENSG00000168214.22	ENST00000355476.8	5395	11	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	227.113385778998	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	1	True	NA	23	True	AATAAA	-29	NA	26321013	26434923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_10427.known	chr1	-	1545	9	FSM	ENSG00000116521.11	ENST00000302631.8	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_7	60.3053428395859	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-3	True	NA	-3	True	AATAAA	-23	NA	155262360	155255980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_104271.known	chr4	+	2169	11	FSM	ENSG00000168214.22	ENST00000681484.1	2169	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	359.70493463393	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGAAATGCAGAAGCC	77	False	NA	NA	False	NA	NA	NA	26321298	26431159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321872_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_1043.known	chr1	+	2833	7	FSM	ENSG00000169598.17	ENST00000378209.8	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	5.61001089323561	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3	True	NA	NA	False	AATAAA	-18	NA	3857475	3885429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_104304.nic	chr4	+	629	5	ISM	ENSG00000168214.22	ENST00000348160.9	1998	12	-11	15604	9	-51	5prime_fragment	FALSE	canonical	3	291	junction_1	379.130914065313	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAATGGAACGCGATGG	34	False	NA	NA	False	AAGAAA	-7	NA	26320795	26415532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474
transcript_104306.known	chr4	+	2106	12	FSM	ENSG00000168214.22	ENST00000680511.1	2106	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	462.310868186089	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTAACGAATCAAACACAAA	2	True	NA	NA	False	NA	NA	NA	26321014	26430911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26383884_26384609_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104311.nic	chr4	+	456	4	ISM	ENSG00000168214.22	ENST00000510778.7	1198	12	-230	15171	-1	-51	5prime_fragment	FALSE	canonical	3	479	junction_1	304.178675562023	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAATGGAACGCGATGG	24	False	NA	NA	False	AAGAAA	-7	NA	26320785	26415532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474
transcript_104317.known	chr4	+	566	5	FSM	ENSG00000168214.22	ENST00000506956.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	475.588254165302	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGCAGCTAAACTTGGA	393	False	NA	NA	False	NA	NA	NA	26319661	26415613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26319771_26362445_26362629_26386352_26386392_26406174_26406271_26415474
transcript_104318.known	chr4	+	5761	11	FSM	ENSG00000168214.22	ENST00000342320.8	5761	11	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	232.968152329884	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAATGGGCTTTGTCA	NA	False	NA	140	True	TTTAAA	-24	NA	26362435	26435131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104319.known	chr4	+	860	2	FSM	ENSG00000168214.22	ENST00000505727.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	1389	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCCACAGTAAAAAAAAAA	5803	False	NA	NA	False	NA	NA	NA	26430145	26431174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26430523_26430691
transcript_104320.known	chr4	+	1766	13	FSM	ENSG00000168214.22	ENST00000681679.1	1766	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	485.862949354605	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGGTTTCTTGGGA	-2	True	NA	NA	False	AAAAAG	-29	NA	26321010	26431083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26422131_26422157_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_104321.known	chr4	+	340	4	FSM	ENSG00000168214.22	ENST00000514807.5	340	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	446.327483158076	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAAGATTATTTT	25	False	NA	NA	False	NA	NA	NA	26320786	26406263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26320816_26362445_26362629_26386352_26386392_26406174
transcript_104322.known	chr4	+	1682	10	FSM	ENSG00000168214.22	ENST00000504907.5	1682	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_9	367.495158278343	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGATTTGAAATGCAGAA	NA	False	NA	NA	False	NA	NA	NA	26362435	26431156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430691
transcript_104326.known	chr4	+	2967	21	FSM	ENSG00000109680.11	ENST00000264866.9	2967	21	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	6.07947366142827	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTATAATCCTATGCT	-12	True	NA	NA	False	AATAAA	-27	NA	26584083	26756223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26584293_26613168_26613242_26614407_26614454_26620612_26620689_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_104333.known	chr4	+	1386	18	FSM	ENSG00000109680.11	ENST00000511789.5	1386	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.285550779959	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACAGTCACTGGC	98	False	NA	NA	False	NA	NA	NA	26584193	26754947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26584293_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_104336.nic	chr4	+	445	3	ISM	ENSG00000109680.11	ENST00000515568.1	713	9	-233	48538	-35	-6132	5prime_fragment	FALSE	canonical	3	28	junction_2	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTGTATTATTATTT	-4	True	NA	NA	False	AATAAA	-18	NA	26584048	26614535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_26584293_26613168_26613242_26614407
transcript_104338.nic	chr4	+	557	3	NIC	ENSG00000109689.19	novel	407	2	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCCCCTGTGATTTGT	NA	False	NA	27	True	ACTAAA	-19	NA	26857581	26858919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_26857683_26858198_26858348_26858612
transcript_104339.nnic	chr4	+	527	3	NNC	ENSG00000109689.19	novel	407	2	NA	NA	27	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCCCCTGTGATTTGT	NA	False	NA	27	True	ACTAAA	-19	NA	26857704	26858919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_26857776_26858198_26858348_26858612
transcript_104341.known	chr4	+	407	2	FSM	ENSG00000109689.19	ENST00000478425.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCCCCTGTGATTTGT	506	False	NA	27	True	ACTAAA	-19	NA	26858247	26858919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26858348_26858612
transcript_104342.known	chr4	-	327	2	FSM	ENSG00000240005.6	ENST00000472346.1	327	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGTTGCCAGCATATT	1282	False	NA	0	True	AATAAA	-26	NA	26860244	26859808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_26860029_26860137
transcript_104343.known	chr4	-	346	2	FSM	ENSG00000240005.6	ENST00000667363.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGCCAGCATATTTTT	-10	True	NA	3	True	AATAAA	-29	NA	26860632	26859805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_26860029_26860509
transcript_104344.nic	chr4	-	1191	2	ISM	ENSG00000251410.2	ENST00000653771.1	3482	3	0	2753	0	453	5prime_fragment	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTAGTTTCTGATTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	27977926	27967269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_27967928_27977393
transcript_104347.known	chr4	+	865	4	FSM	ENSG00000169851.15	ENST00000509759.2	865	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.8730042868667	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAAAGCTTTGCCTGCC	346	False	NA	NA	False	GGGGCT	-7	NA	30724526	31142954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_30724597_30920152_30920370_30950119_30950216_31142472
transcript_104351.known	chr4	+	6403	2	FSM	ENSG00000169851.15	ENST00000361762.3	6403	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGCCATTGGTTTATTG	35	False	NA	4	True	ATTAAA	-18	NA	30720414	30732973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_30724597_30730752
transcript_104353.known	chr4	+	602	2	FSM	ENSG00000251434.1	ENST00000505636.1	602	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGAGATCGTTCCTTT	NA	False	NA	NA	False	NA	NA	NA	31350283	31351725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_31350352_31351191
transcript_104354.known	chr4	+	947	4	FSM	ENSG00000251129.3	ENST00000513211.2	947	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCGTGCTGTTCTTATTC	-1	True	NA	NA	False	ATTAAA	-26	NA	31997378	32155833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_31997823_32146052_32146268_32155313_32155407_32155638
transcript_104355.known	chr4	+	1282	5	FSM	ENSG00000251129.3	ENST00000660373.2	1298	5	0	16	0	-16	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTATTAATATAATTTT	-1	True	NA	NA	False	AATAAA	-17	NA	31997378	32228527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_31997823_32155313_32155407_32157955_32158082_32225023_32225122_32228006
transcript_104357.known	chr4	+	3211	14	FSM	ENSG00000169299.14	ENST00000381967.9	3211	14	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	19.9520134381642	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTGCATTTTTTTT	-18	True	NA	10	True	AAGAAA	-13	NA	37826685	37862937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839847_37839932_37840065_37840260_37844363_37844554_37845632_37845731_37846930_37847112_37847201_37847296_37848521_37848652_37850183_37850374_37855607_37855742_37861509
transcript_10436.known	chr1	-	1537	8	FSM	ENSG00000116521.11	ENST00000355379.3	1537	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	178.035080239593	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	2	False	NA	-3	True	AATAAA	-23	NA	155262430	155255980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155262085
transcript_104367.known	chr4	+	1567	3	FSM	ENSG00000065882.17	ENST00000402522.1	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	9.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCCATCTCTTGAA	0	True	NA	0	True	AATAAA	-21	NA	37891098	37952812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_37891349_37902002_37902513_37952005
transcript_104368.known	chr4	+	731	1	FSM	ENSG00000250254.2	ENST00000504686.2	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTCATATTCCTCTTTA	-4	True	NA	NA	False	AATAAA	-42	NA	37960397	37961128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_37960400_37961100
transcript_104369.known	chr4	-	322	1	FSM	ENSG00000249649.1	ENST00000507850.1	322	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGGCCAGGCGCAGTGG	NA	False	NA	NA	False	CATAAA	-9	NA	38007105	38006783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_38006800_38007100
transcript_10437.nnic	chr1	-	1478	8	NIC	ENSG00000116521.11	novel	1545	9	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_6	198.697493385173	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	16	False	NA	-3	True	AATAAA	-23	NA	155262416	155255980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155261656_155261735_155262085
transcript_104374.known	chr4	+	1871	4	FSM	ENSG00000109787.13	ENST00000514033.1	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	16.4181471413663	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCCTTTATTTTCTCT	-1	True	NA	13	True	AATAAA	-13	NA	38664196	38690751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_38664462_38680586_38680683_38688584_38689072_38689728
transcript_104377.nic	chr4	+	1339	10	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	0	2253	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	11.3670522363192	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAAAGGAAGAGA	-5	True	NA	-41	True	AAGAAA	-5	NA	38867750	38931536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450
transcript_104380.nic	chr4	+	1143	7	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	0	-14104	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	9.37638878602347	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTGTGCTGAGGTCA	-5	True	NA	11	True	ATTAAA	-23	NA	38867750	38915179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920
transcript_104381.nic	chr4	+	947	6	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	0	16994	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	9.15641851380768	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTGAATAGCTCATTT	-5	True	NA	8	True	AATAAA	-21	NA	38867750	38908789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591
transcript_104383.nic	chr4	+	753	3	ISM	ENSG00000197712.12	ENST00000358869.5	4060	15	-43	67137	12	-13193	5prime_fragment	FALSE	canonical	3	8	junction_2	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGCATTTTGATAAGTG	7	True	NA	5	True	TATAAA	-16	NA	38867762	38878602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_38867835_38868397_38868547_38878070
transcript_104384.nic	chr4	+	618	2	ISM	ENSG00000197712.12	ENST00000510213.5	567	3	74	13191	0	-13191	5prime_fragment	FALSE	canonical	3	52	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTTTGATAAGTGTA	-5	True	NA	7	True	TATAAA	-18	NA	38867750	38878604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_38867835_38878070
transcript_104385.known	chr4	+	4060	15	FSM	ENSG00000197712.12	ENST00000358869.5	4060	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	20.2016618835467	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATTGCCAGAAATGTTT	4	True	NA	11	True	ATTAAA	-15	NA	38867805	38945739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_38867835_38868397_38868547_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450_38931613_38932234_38932375_38935717_38935791_38940967_38941022_38943455
transcript_104389.known	chr4	+	7718	11	FSM	ENSG00000109790.18	ENST00000504108.7	7718	11	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_1	50.6032607645001	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGATAATACTCATGTAAT	NA	False	NA	8	True	AATAAA	-23	NA	39062231	39126233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39121009
transcript_104390.known	chr4	+	3288	10	FSM	ENSG00000109790.18	ENST00000381930.8	3288	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	51.1663952218641	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	89	False	NA	NA	False	NA	NA	NA	39062439	39116332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158
transcript_104391.known	chr4	+	909	5	FSM	ENSG00000109790.18	ENST00000515612.1	909	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	74.8665479369792	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACTAGAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	39103314	39126857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39126693
transcript_104392.known	chr4	+	4395	37	FSM	ENSG00000157796.18	ENST00000399820.8	4395	37	0	0	0	0	multi-exon	TRUE	canonical	2	29	junction_12	13.0373099455863	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGACGTTTTTCTGG	9	True	NA	13	True	AATAAA	-14	NA	39182528	39285810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39274807_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_104393.known	chr4	+	2513	14	FSM	ENSG00000157796.18	ENST00000506503.1	2513	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.1237019515407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAGTATAGTA	28	False	NA	NA	False	AATAAA	-19	NA	39182547	39219133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217986
transcript_104397.nic	chr4	+	1273	11	ISM	ENSG00000157796.18	ENST00000506503.1	2513	14	-74	3065	-30	149	5prime_fragment	TRUE	canonical	3	34	junction_5	11.0639052779749	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATTACTATTTTCTTT	NA	False	NA	NA	False	AATAAA	-16	NA	39182473	39216068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840
transcript_104398.known	chr4	+	2676	6	FSM	ENSG00000157796.18	ENST00000512534.5	2676	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	14.9130815058458	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGACGTTTTTCTG	NA	False	NA	12	True	AATAAA	-13	NA	39270052	39285809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39270101_39272979_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_104399.nic	chr4	+	1075	3	ISM	ENSG00000157796.18	ENST00000502389.1	555	5	-57	7350	-30	-7350	5prime_fragment	FALSE	canonical	3	57	junction_1	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGATGTATAGAGTC	NA	False	NA	NA	False	NA	NA	NA	39182473	39187431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_39182564_39185725_39185818_39186538
transcript_104400.known	chr4	-	1255	10	FSM	ENSG00000035928.17	ENST00000418436.5	1255	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	120.274685615885	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAAATGCCA	2	True	NA	NA	False	TATAAA	-21	NA	39366362	39320464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39355876_39355998_39366238
transcript_104401.known	chr4	-	4870	25	FSM	ENSG00000035928.17	ENST00000349703.7	4870	25	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_12	39.1341842255591	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	2	True	NA	-7	True	AATAAA	-19	NA	39366362	39287455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306702_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_104402.known	chr4	-	4886	25	FSM	ENSG00000035928.17	ENST00000381897.5	4886	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_12	51.7984207180961	1950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-11	True	NA	-7	True	AATAAA	-19	NA	39366375	39287455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_104403.known	chr4	-	504	5	FSM	ENSG00000035928.17	ENST00000503784.1	504	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	133.018795664372	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCCACATCAGTACTTGA	15	True	NA	NA	False	AATAAA	-5	NA	39366349	39327607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39327757_39342344_39342468_39345400_39345477_39351431_39351477_39366238
transcript_104404.known	chr4	+	6002	5	FSM	ENSG00000134962.7	ENST00000257408.5	6002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTGGTCAATTTTAAGA	-1	True	NA	NA	False	AATAAA	-33	NA	39406929	39451533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39407775_39434209_39434721_39437726_39437996_39446331_39447476_39448300
transcript_104412.known	chr4	-	2420	8	FSM	ENSG00000163682.17	ENST00000645496.2	2420	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	2730.76545297901	11891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGACCACCGTATTAA	4	True	NA	-72	True	NA	NA	NA	39458923	39452586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458599_39458890
transcript_104414.known	chr4	-	662	7	FSM	ENSG00000163682.17	ENST00000508595.6	662	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	2925.3959276196	5260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	7	True	NA	-19	True	AATAAA	-18	NA	39458920	39454136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458890
transcript_104419.known	chr4	-	724	8	FSM	ENSG00000163682.17	ENST00000295955.14	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	4712	junction_7	1325.20159421355	147017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTATCCTTTTTAGCTA	5	True	NA	-6	True	AATAAA	-31	NA	39458922	39454123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
transcript_104420.known	chr4	-	1127	7	FSM	ENSG00000163682.17	ENST00000449470.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	5878	junction_3	980.516360563827	11572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-5	True	NA	-19	True	AATAAA	-18	NA	39458888	39454136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393
transcript_104421.known	chr4	-	772	7	FSM	ENSG00000163682.17	ENST00000503277.6	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	4712	junction_6	1396.90555832844	5780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAACCGGTTATCCTT	33	False	NA	-14	True	AATAAA	-23	NA	39458894	39454131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458441_39458890
transcript_104422.known	chr4	-	571	7	FSM	ENSG00000163682.17	ENST00000503040.5	571	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3048.03940627778	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCAGGCTGATGAATAAG	12	True	NA	NA	False	AAAAAG	-8	NA	39458915	39454561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454650_39454863_39454930_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
transcript_104427.known	chr4	+	3572	11	FSM	ENSG00000121897.15	ENST00000640888.2	3572	11	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_7	18.8374626741501	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCTCAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	39459055	39479506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_104429.known	chr4	+	2259	11	FSM	ENSG00000121897.15	ENST00000640381.1	2259	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	27.2169065104762	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTCGGGAGGCTAAGGC	5	True	NA	NA	False	AAAACA	-42	NA	39459057	39477414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39468428_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_104432.known	chr4	+	1485	10	FSM	ENSG00000121897.15	ENST00000340169.7	1485	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	32.1597094759926	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCTTTTAGTGTA	16	True	NA	12	True	AATAAA	-45	NA	39459108	39477584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39477062
transcript_104433.known	chr4	+	1578	10	FSM	ENSG00000121897.15	ENST00000381846.2	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	29.9481032602883	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATCTTTGTAAGAAT	10	True	NA	10	True	ATTAAA	-25	NA	39459062	39477648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_104449.known	chr4	+	1258	8	FSM	ENSG00000121897.15	ENST00000261434.8	1258	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	36.9428681913584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATAAAAAGGAAAAAAAA	-6	True	NA	-40	True	NA	NA	NA	39459086	39477532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39463524_39463606_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_104452.known	chr4	+	1159	7	FSM	ENSG00000121897.15	ENST00000638451.1	1159	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	39.9183193812342	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCTTTTAGTGTA	16	True	NA	12	True	AATAAA	-45	NA	39459108	39477584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39463524_39463606_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_104457.known	chr4	+	1011	4	FSM	ENSG00000121897.15	ENST00000424936.6	1011	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	6.23609564462324	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAAAAGTTTTTAA	5	True	NA	NA	False	NA	NA	NA	39459057	39464163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524
transcript_104459.known	chr4	+	1005	3	FSM	ENSG00000121897.15	ENST00000509519.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	46	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGAGGATCACTTGAGC	-8	True	NA	NA	False	NA	NA	NA	39459044	39464238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39463524
transcript_104465.known	chr4	-	3037	12	FSM	ENSG00000109814.12	ENST00000316423.11	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_1	89.1158592150486	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTAATTTTTGTCA	-1	True	NA	0	True	AATAAA	-21	NA	39527439	39498754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39521350_39521520_39527282
transcript_104472.known	chr4	-	1712	11	FSM	ENSG00000109814.12	ENST00000507089.5	1712	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	332.492420966253	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGGCACCCGCCACAGT	-1	True	NA	NA	False	NA	NA	NA	39527439	39499910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39527282
transcript_10450.nic	chr1	-	1271	5	ISM	ENSG00000116521.11	ENST00000302631.8	1545	9	-56	2356	14	489	5prime_fragment	FALSE	canonical	3	493	junction_3	66.9141240695864	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	16	False	NA	NA	False	NA	NA	NA	155262416	155258336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_104504.nic	chr4	+	1181	2	FSM	ENSG00000249348.2	ENST00000685788.1	1176	2	-7	2	-7	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTTGGGTATGT	175	False	NA	9	True	AATAAA	-18	NA	39527712	39532523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39528339_39531968
transcript_104505.known	chr4	-	2826	11	FSM	ENSG00000109814.12	ENST00000501493.6	2826	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	344.615495879103	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTATATGGGTGTAAT	1	True	NA	-8	True	AATAAA	-13	NA	39527437	39498762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39514082_39514185_39521350_39521520_39527282
transcript_104506.known	chr4	-	575	4	FSM	ENSG00000109814.12	ENST00000503779.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_2	564.262941071507	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTCGCATATTTGATGC	1	True	NA	NA	False	NA	NA	NA	39527437	39510708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39510862_39514082_39514181_39521350_39521520_39527282
transcript_104510.known	chr4	+	2585	4	FSM	ENSG00000255458.8	ENST00000666863.1	2585	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.79869268479038	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGAGATCTTTGCATTT	-1	True	NA	-12	True	AATAAA	-3	NA	39639139	39653514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39639295_39641689_39641793_39650376_39650455_39651265
transcript_104511.nic	chr4	+	512	3	FSM	ENSG00000255458.8	ENST00000693190.1	393	3	-119	0	-86	0	multi-exon	FALSE	canonical	2	3	junction_1	6.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTATTTTTTGCCTGG	NA	False	NA	NA	False	AATAAA	-24	NA	39639020	39650515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39639295_39641693_39641793_39650376
transcript_104512.known	chr4	+	2155	3	FSM	ENSG00000255458.8	ENST00000659162.1	2155	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTGAACCAACATGT	-1	True	NA	NA	False	NA	NA	NA	39639139	39653166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39639295_39641693_39641793_39651265
transcript_104517.known	chr4	+	5153	7	FSM	ENSG00000078140.14	ENST00000261427.10	5153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	355.845823356127	5457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATATCTTATTTCTG	3	True	NA	24	True	AATAAA	-25	NA	39698135	39782792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_104520.known	chr4	+	2262	7	FSM	ENSG00000078140.14	ENST00000438068.6	2262	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	446.105244184474	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGTAATGTTAAAG	6	True	NA	8	True	AATAAA	-14	NA	39698138	39779992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698303_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_104524.known	chr4	+	871	6	FSM	ENSG00000078140.14	ENST00000513231.5	871	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	285.56428348097	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACGTCTGTGTAAATT	6	True	NA	6	True	AATAAA	-5	NA	39698138	39778607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_104525.known	chr4	+	891	5	FSM	ENSG00000078140.14	ENST00000503368.5	891	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	405.015431804765	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGTGTTTAGCAGTGT	-4	True	NA	109	True	AAGAAA	-7	NA	39698162	39778710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_104533.known	chr4	+	566	4	FSM	ENSG00000078140.14	ENST00000510719.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	460.029226124698	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTAATTTTT	161	False	NA	32	True	AATAAA	-31	NA	39698327	39778633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39774833_39774934_39777681_39777811_39778359
transcript_104537.known	chr4	-	7131	33	FSM	ENSG00000121892.15	ENST00000303538.13	7131	33	0	0	0	0	multi-exon	TRUE	canonical	1	147	junction_3	64.1808966905262	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTAGTGTGGAGCCCTG	-28	True	NA	NA	False	AATAAA	-20	NA	39977911	39822862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39825489_39837855_39838209_39841947_39842057_39844655_39844802_39845817_39845881_39848850_39848971_39849519_39849653_39862218_39862334_39862868_39863074_39863335_39863460_39866860_39866998_39869393_39869463_39872985_39873145_39874288_39874413_39876992_39877154_39879727_39879834_39890248_39890365_39898388_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
transcript_104540.known	chr4	+	9720	18	FSM	ENSG00000078177.14	ENST00000261435.11	9720	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	26.8941279398879	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTGTGAGGAAATCCT	-15	True	NA	14	True	AATAAA	-15	NA	40056849	40158252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
transcript_104541.nic	chr4	+	1996	8	NIC	ENSG00000078177.14	novel	9720	18	NA	NA	-17	17498	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	31.3856850250205	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGATATGAATCCTAGC	31	True	NA	NA	False	AAGAAA	-6	NA	40056895	40120104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_40057031_40073454_40073552_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931
transcript_104543.known	chr4	+	1157	1	FSM	ENSG00000260296.1	ENST00000567102.1	1157	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACTCATCTAACTAGAG	NA	False	NA	11	True	AATAAA	-16	NA	40166674	40167831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40166700_40167800
transcript_104545.known	chr4	+	571	4	FSM	ENSG00000168421.13	ENST00000513894.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.9700509722291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTTTTCAAAGCAGACG	6	False	NA	NA	False	NA	NA	NA	40196994	40243193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40197301_40212663_40212792_40242713_40242835_40243177
transcript_104546.known	chr4	+	2268	4	FSM	ENSG00000168421.13	ENST00000610353.4	2268	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.6707311029399	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGGCAACAGAACTT	194	False	NA	NA	False	NA	NA	NA	40196906	40244764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40197301_40235192_40235359_40242713_40242835_40243177
transcript_104548.known	chr4	+	4181	3	FSM	ENSG00000168421.13	ENST00000381799.10	4181	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGGTAGTTCATTCTT	-15	True	NA	NA	False	ATTAAA	-35	NA	40197030	40246967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40197301_40242713_40242835_40243177
transcript_104556.known	chr4	-	8972	18	FSM	ENSG00000163697.17	ENST00000295974.12	8972	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	99.9181672090131	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATATGTCTATGAATGTT	-7	True	NA	-2	True	AATAAA	-20	NA	41214618	40810026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40890363_40890492_40893264_40893412_40934455_40934517_40934613_40934700_40935076_40935140_40944864_40945071_41013582_41014399_41033235_41033305_41065575_41065674_41100638_41100751_41142986_41143143_41214404
transcript_104560.known	chr4	-	1681	7	FSM	ENSG00000163697.17	ENST00000502841.5	1681	7	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_6	49.9357921067978	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCATTTTGGGTGGGA	-14	True	NA	-28	True	AATAAA	-4	NA	40857155	40815332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
transcript_104561.nic	chr4	-	1707	7	NIC	ENSG00000163697.17	novel	2964	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_6	80.2982288444493	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTCAAACTTCTGCCT	NA	False	NA	-8	True	AATAAA	-24	NA	40857202	40815312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
transcript_104563.nic	chr4	-	1630	7	NIC	ENSG00000163697.17	novel	1681	7	NA	NA	-10	-57	combination_of_known_junctions	FALSE	canonical	3	69	junction_6	80.2982288444493	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTCTTTTCCGATGGTT	NA	False	NA	-23	True	ATTAAA	-16	NA	40857202	40815389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
transcript_104575.known	chr4	+	4839	12	FSM	ENSG00000179299.17	ENST00000381782.7	4839	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_10	78.1193196282044	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTTTTCTTCTTTGAG	10	True	NA	NA	False	ATTAAA	-17	NA	40749954	40811184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40807060_40807185_40808306
transcript_104579.nnic	chr4	+	1940	8	NNC	ENSG00000179299.17	novel	3546	11	NA	NA	32	10372	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_7	76.1571951121293	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGATGCCCAACTCTGTTG	1	True	NA	10	True	ATTAAA	-20	NA	40749995	40786848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40786340
transcript_104583.nic	chr4	+	1744	7	ISM	ENSG00000179299.17	ENST00000316607.5	3546	11	81	33404	42	105	5prime_fragment	FALSE	canonical	3	108	junction_6	45.5829524664162	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAAGTGACAAAGATAATA	11	True	NA	NA	False	AATAAA	-39	NA	40750005	40776581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048
transcript_104587.known	chr4	+	1759	6	FSM	ENSG00000179299.17	ENST00000473399.5	1759	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	29.5472502950782	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAGTTTAAATTCA	19	True	NA	NA	False	AATAAA	-7	NA	40749963	40775456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766
transcript_104592.nic	chr4	+	1113	4	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	221	13737	221	-13737	5prime_fragment	FALSE	canonical	3	207	junction_2	22.3954360429878	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCTACTTAAGAACAAAC	-11	True	NA	NA	False	AGTAAA	-9	NA	40750184	40761719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170
transcript_104593.nic	chr4	+	1102	3	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	66	14581	66	-14581	5prime_fragment	FALSE	canonical	3	207	junction_2	24	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATTTAAATAGTTT	35	False	NA	NA	False	NA	NA	NA	40750029	40760875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_40750301_40750602_40750992_40760433
transcript_104597.known	chr4	+	917	10	FSM	ENSG00000154277.13	ENST00000503431.5	917	10	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_1	921.275256785632	3902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCATTGTGGTGTGAGC	NA	False	NA	-91	True	NA	NA	NA	41256768	41268256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41256804_41256949_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_10460.known	chr1	-	752	2	FSM	ENSG00000116521.11	ENST00000480219.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	0	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAAGCATGGTGTGCAT	103	False	NA	NA	False	NA	NA	NA	155262329	155261226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155261735_155262085
transcript_104603.known	chr4	+	1119	8	FSM	ENSG00000154277.13	ENST00000512419.5	1119	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1049.18926912592	25183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTCCTCAATATGTCA	NA	False	NA	55	True	NA	NA	NA	41256910	41268455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41257021_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_10461.known	chr1	-	649	3	FSM	ENSG00000116521.11	ENST00000478737.5	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	328.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGTTTCCTGAATCTTC	3517	False	NA	-1	True	AATAAA	-25	NA	155258915	155255978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155256420_155256673_155256792_155258825
transcript_104612.known	chr4	+	748	9	FSM	ENSG00000154277.13	ENST00000505232.5	748	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	978.7329819721	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTTCAACATGAAAATAT	2	True	NA	-29	True	NA	NA	NA	41256931	41268108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263228_41263292_41264102_41264162_41267986
transcript_104613.known	chr4	+	785	9	FSM	ENSG00000154277.13	ENST00000512788.1	785	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	975.604291900666	2970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACCCCCCCATGCAGT	15	False	NA	-12	True	NA	NA	NA	41256944	41268125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264191_41267986
transcript_104614.known	chr4	+	862	6	FSM	ENSG00000154277.13	ENST00000514764.5	862	6	0	0	0	0	multi-exon	FALSE	canonical	3	2776	junction_4	101.832018540339	3078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCTGATTCTCATTT	2958	False	NA	29	True	AATAAA	-21	NA	41260638	41268429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_104619.known	chr4	+	1506	3	FSM	ENSG00000064042.18	ENST00000509454.5	1506	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATATTGTGTGCTATGA	1	True	NA	NA	False	ATTAAA	-32	NA	41612901	41620294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41613105_41613465_41613662_41619187
transcript_104625.known	chr4	+	1092	8	FSM	ENSG00000109133.13	ENST00000513702.5	1092	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	82.1775082193593	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTTGCTAATGGTTA	-26	True	NA	-37	True	AAAAAG	-20	NA	41935128	41954395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41935263_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_104628.known	chr4	+	867	8	FSM	ENSG00000109133.13	ENST00000508448.5	867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.119448461425	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCACTGTTTGTGAGA	-26	True	NA	106	True	AATGAA	-38	NA	41935128	41954122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41935311_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_104631.nic	chr4	+	1241	7	NIC	ENSG00000109133.13	novel	7404	7	NA	NA	-9	0	intron_retention	FALSE	canonical	2	3	junction_6	105.095855717002	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCTTTTTCCTTGTGTT	-35	True	NA	5	True	AATAAA	-17	NA	41935119	41954021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41953759
transcript_104632.known	chr4	+	7404	7	FSM	ENSG00000109133.13	ENST00000504986.6	7404	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	25.2151850192608	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGATTCTGTACT	0	True	NA	19	True	AAAAAG	-29	NA	41935428	41960803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_104634.known	chr4	+	1570	6	FSM	ENSG00000109133.13	ENST00000264452.9	1570	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	115.040166898349	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGGGTCACCTAG	-26	True	NA	69	True	TTTAAA	-34	NA	41935128	41954857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41935530_41938601_41938697_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_104635.known	chr4	+	819	4	FSM	ENSG00000014824.14	ENST00000510460.1	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	30.8220700148449	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAGAATCTTAGGAGTTA	6	True	NA	NA	False	NA	NA	NA	41990526	42020775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415
transcript_104639.nnic	chr4	+	830	2	NIC	ENSG00000285454.1	novel	2324	7	NA	NA	351	-28772	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGACTCATGCCTCTTC	NA	False	NA	5	True	NA	NA	NA	42151378	42239338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_42151564_42238693
transcript_10464.known	chr1	-	2120	13	FSM	ENSG00000176444.19	ENST00000355560.4	2120	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	95.5133789348673	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	-4	True	NA	-8	True	AATAAA	-19	NA	155273482	155262873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269714_155270807_155270978_155273200
transcript_104640.known	chr4	-	8692	6	FSM	ENSG00000188848.17	ENST00000504360.5	8692	6	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_5	34.4766587708264	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTAACTTGGTTTT	NA	False	NA	-21	True	AATAAA	-16	NA	42152878	42110939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_42117736_42120124_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
transcript_104641.known	chr4	+	2322	2	FSM	ENSG00000178343.5	ENST00000319234.5	2322	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTAATGTGATTC	7	True	NA	19	True	AATAAA	-30	NA	42397487	42402487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_42398334_42401011
transcript_104644.known	chr4	+	390	1	FSM	ENSG00000124399.4	ENST00000513465.1	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGCAATGATGACTATA	NA	False	NA	NA	False	NA	NA	NA	43898961	43899351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_43899000_43899400
transcript_104647.known	chr4	+	4460	17	FSM	ENSG00000151806.14	ENST00000281543.6	4460	17	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_9	29.0688837074973	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTCTATCACTGCCAA	-27	True	NA	3	True	ATTAAA	-15	NA	44678419	44700928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_44678788_44680440_44680553_44680693_44680843_44681122_44681204_44682333_44682412_44683234_44683319_44685958_44686024_44686509_44686714_44688006_44688147_44689285_44689410_44689842_44689976_44690716_44690861_44691665_44691800_44694411_44694514_44695614_44695735_44697407_44697445_44698543
transcript_10465.known	chr1	-	2154	13	FSM	ENSG00000176444.19	ENST00000368361.9	2154	13	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_10	57.1328860348107	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	22	False	155273526	-2	True	AATAAA	-25	NA	155273504	155262867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269717_155270807_155270978_155273200
transcript_104653.nnic	chr4	-	1095	7	NNC	ENSG00000163281.12	novel	5382	6	NA	NA	-20	9165	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	19.5909559632897	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTAGCATGTTTGTT	10	False	NA	NA	False	AATAAA	-14	NA	44726608	44692629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_44692786_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_104654.known	chr4	-	2235	7	FSM	ENSG00000163281.12	ENST00000295448.8	2235	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_1	15.0296004234607	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTTATAAATGTTTTT	12	True	NA	NA	False	NA	NA	NA	44726556	44701794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_104658.nnic	chr4	-	3381	7	NNC	ENSG00000163281.12	novel	5382	6	NA	NA	-213	3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	17.3877351409933	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTACTGTGTCTTATA	NA	False	NA	NA	False	AATAAA	-28	NA	44726801	44703242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_44705492_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_104661.known	chr4	-	1050	6	FSM	ENSG00000163281.12	ENST00000507534.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	21.3766227454198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGTGTCCACATCAGG	-3	True	NA	NA	False	TATAAA	-42	NA	44726523	44702787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44726473
transcript_104663.known	chr4	-	5382	6	FSM	ENSG00000163281.12	ENST00000509756.1	5382	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	10.8185026690388	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTTACTGTGTCTT	23	True	NA	NA	False	AATAAA	-25	NA	44726545	44703245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_10467.known	chr1	-	1885	12	FSM	ENSG00000176444.19	ENST00000476983.5	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	96.1325703098599	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	197	False	NA	-8	True	AATAAA	-19	NA	155273329	155262873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269717_155270807_155270978_155273200
transcript_104676.known	chr4	-	6758	9	FSM	ENSG00000163285.8	ENST00000295452.5	6758	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.91279504943276	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCTTTCTTGATAGTT	4	True	NA	NA	False	AATAAA	-19	NA	46124054	46035768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_46041255_46051423_46051639_46058216_46058370_46058484_46058623_46064440_46064524_46065363_46065585_46083985_46084054_46097200_46097350_46123809
transcript_104678.nic	chr4	-	1391	7	ISM	ENSG00000109158.11	ENST00000264318.4	11147	9	-360	52183	-360	0	5prime_fragment	FALSE	canonical	0	0	junction_1	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGCAATTCATTTCTT	501	False	NA	NA	False	AATAAA	-29	NA	46993941	46971082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_46971236_46974231_46974376_46977060_46977144_46977409_46977631_46979030_46979099_46992827_46992947_46993338
transcript_104679.known	chr4	+	1939	9	FSM	ENSG00000163288.14	ENST00000295454.8	1939	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.330718913883074	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATAAAAAAAAACACACAAT	-2	True	NA	NA	False	NA	NA	NA	47031566	47426447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_47031732_47031913_47032006_47032416_47032485_47161248_47161470_47320126_47320210_47403317_47403456_47403558_47403712_47406681_47406927_47425673
transcript_104680.known	chr4	-	1461	5	FSM	ENSG00000169019.11	ENST00000381571.6	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	21.1113121335458	739	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTTTTATTTTTAT	-23	True	NA	66	True	AATGAA	-3	NA	47463702	47450786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47451666_47453058_47453215_47456576_47456730_47460143_47460300_47463585
transcript_104685.known	chr4	+	765	3	FSM	ENSG00000282904.2	ENST00000635489.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCTTCTTTTCACATTT	NA	False	NA	NA	False	AATAAA	-14	NA	47463783	47470477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_47464036_47467515_47467624_47470072
transcript_104687.known	chr4	+	6668	23	FSM	ENSG00000145246.14	ENST00000273859.8	6668	23	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	4.16027057289179	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAAGAGGTTGGGATCTG	-34	True	NA	NA	False	TTTAAA	-43	NA	47485274	47593486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_47485520_47512503_47512831_47515475_47515671_47523011_47523217_47525556_47525643_47535508_47535616_47535901_47536034_47536436_47536565_47536685_47536939_47546623_47546863_47554725_47554915_47557663_47558274_47558922_47559030_47560948_47561076_47563580_47563766_47568836_47569147_47572153_47572231_47572871_47572998_47576772_47576974_47580397_47580479_47581959_47582065_47587018_47587207_47591041
transcript_104688.known	chr4	+	566	2	FSM	ENSG00000145246.14	ENST00000507889.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAACCTTAGAATATC	-12	True	NA	NA	False	AAGAAA	-38	NA	47485296	47512846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_47485520_47512503
transcript_104693.known	chr4	+	616	1	FSM	ENSG00000242262.1	ENST00000487352.1	616	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTAAAGTTTGTAAAA	40	False	NA	-42	True	NA	NA	NA	47706371	47706987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_47706400_47707000
transcript_104697.known	chr4	+	5302	6	FSM	ENSG00000163293.12	ENST00000295461.10	5302	6	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_5	4.77493455452533	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAGTTCAGTTTTTAG	-10	True	NA	16	True	AATAAA	-17	NA	48016771	48040173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48016886_48025067_48025335_48030119_48030177_48032992_48033084_48034880_48035042_48035561
transcript_104701.known	chr4	-	3880	23	FSM	ENSG00000170448.12	ENST00000507489.2	3880	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_22	24.8107298169479	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCTAGAATATTTA	-3	True	NA	3	True	ATTAAA	-16	NA	47914583	47847239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914364
transcript_104702.known	chr4	-	2664	23	FSM	ENSG00000170448.12	ENST00000507131.5	2664	23	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_22	17.0230762192661	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCGTCGGAAGAAGAACAG	-7	True	NA	NA	False	AAAACA	-9	NA	47914616	47848303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
transcript_104703.known	chr4	-	3723	23	FSM	ENSG00000170448.12	ENST00000329043.7	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_22	23.110764548507	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAATATTTATTATTAG	NA	False	NA	10	True	ATTAAA	-23	NA	47914667	47847232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914612
transcript_104715.nic	chr4	-	454	3	ISM	ENSG00000170448.12	ENST00000507131.5	2664	23	-28	62569	-8	-59790	5prime_fragment	FALSE	canonical	3	46	junction_2	26.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGGAAAAATACTTGCAAA	NA	False	NA	-5	True	NA	NA	NA	47914644	47910872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_47910995_47913968_47914206_47914549
transcript_104720.known	chr4	-	589	5	FSM	ENSG00000198515.16	ENST00000513178.2	589	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAAGTATATTTACAATA	3	True	NA	NA	False	NA	NA	NA	48016672	47949834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47949896_47951352_47951470_47952582_47952704_48010793_48010894_48016482
transcript_104722.nic	chr4	-	863	2	ISM	ENSG00000198515.16	ENST00000513178.2	589	5	-14	60400	-5	-60400	5prime_fragment	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATAGATTTCTATAATT	-11	True	NA	NA	False	AATAAA	-41	NA	48016686	48010234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_48010894_48016482
transcript_104723.known	chr4	-	3661	18	FSM	ENSG00000135605.13	ENST00000381501.8	3661	18	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_8	5.85877628140646	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATCTGCCACATTCCT	-17	True	NA	NA	False	AGTAAA	-20	NA	48269838	48135782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48137500_48138664_48138823_48138903_48139023_48141354_48141420_48145078_48145296_48145407_48145580_48146324_48146400_48149556_48149691_48150862_48150943_48156679_48156735_48163701_48163768_48167777_48167954_48168585_48168627_48170247_48170377_48171367_48171450_48176081_48176187_48228476_48228660_48269751
transcript_104734.nic	chr4	-	2010	2	ISM	ENSG00000075539.15	ENST00000505437.5	443	3	-45	74506	10	-62955	5prime_fragment	FALSE	canonical	3	58	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAAAAAACACACGA	-32	True	NA	NA	False	AAAACA	-5	NA	48780312	48708923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_48710699_48780077
transcript_104735.known	chr4	-	443	3	FSM	ENSG00000075539.15	ENST00000505437.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATCATGTCAAACATTA	13	True	NA	NA	False	AATAAA	-45	NA	48780267	48634417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48634491_48710518_48710699_48780077
transcript_104736.known	chr4	-	441	3	FSM	ENSG00000075539.15	ENST00000502520.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATCATGTCAAACATTA	NA	False	NA	NA	False	AATAAA	-45	NA	48780322	48634417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48634491_48684672_48684796_48780077
transcript_104737.known	chr4	-	11692	64	FSM	ENSG00000075539.15	ENST00000358350.9	11692	64	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_51	15.0616269941116	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAAACAAATTCATTAG	1	True	NA	2	True	AATAAA	-25	NA	48780279	48497356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48499681_48500029_48500221_48501622_48501734_48502827_48502846_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546272_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48684672_48684796_48710518_48710699_48780077
transcript_104750.known	chr4	+	1288	9	FSM	ENSG00000109180.15	ENST00000513391.2	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	255.255141965838	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTTCCTTGATTT	17	True	NA	31	True	AATAAA	-21	NA	48831341	48861250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831399_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_104751.known	chr4	+	1423	9	FSM	ENSG00000109180.15	ENST00000508293.5	1423	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	259.441196372126	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGGCAAATAAAATGTAA	-19	True	NA	-3	True	ATTAAA	-41	NA	48831305	48861216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831532_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_104765.known	chr4	+	571	6	FSM	ENSG00000109180.15	ENST00000506801.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	342.318798782655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAACATCCAGCTTCATCT	2	True	NA	NA	False	NA	NA	NA	48831152	48860790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831250_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
transcript_104768.known	chr4	+	1756	8	FSM	ENSG00000109180.15	ENST00000444354.6	1756	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	258.261218813157	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAAAACAATAAAAATTTGG	-14	True	NA	-27	True	AGTAAA	-44	NA	48831107	48861786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48860724
transcript_104769.known	chr4	+	1958	9	FSM	ENSG00000109180.15	ENST00000264312.12	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	86.499187134909	1972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATATTATGTTA	10	True	NA	2	True	AATAAA	-17	NA	48831087	48861815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_104770.known	chr4	+	594	7	FSM	ENSG00000109180.15	ENST00000512236.5	594	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	287.190219579675	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCCACTGGTATTACTGA	-12	True	NA	NA	False	AATGAA	-4	NA	48831065	48851941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831142_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805
transcript_104771.known	chr4	+	1306	8	FSM	ENSG00000109180.15	ENST00000396448.6	1306	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	270.765505897028	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTCATCTTCCTTGAT	-13	True	NA	29	True	AATAAA	-19	NA	48831064	48861248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48852021_48860724
transcript_104772.known	chr4	+	1594	9	FSM	ENSG00000109180.15	ENST00000381473.7	1594	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	214.2782945144	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCTTAATGTTTAT	6	True	NA	-19	True	ATTAAA	-25	NA	48831083	48861200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_104773.known	chr4	+	688	7	FSM	ENSG00000109180.15	ENST00000511102.5	688	7	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	97.1552308879398	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGTATTACTGATCAT	6	True	NA	NA	False	AATGAA	-8	NA	48831083	48851945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805
transcript_104774.known	chr4	+	1916	2	FSM	ENSG00000109180.15	ENST00000502972.1	1916	2	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCCTCATCTTCCTTG	5950	False	NA	27	True	AATAAA	-17	NA	48855971	48861246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48857366_48860724
transcript_104775.known	chr4	+	432	6	FSM	ENSG00000109180.15	ENST00000509963.5	432	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	314.277838862367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCAAGAGAAATTCAAGAA	-4	True	NA	NA	False	NA	NA	NA	48831117	48849996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831254_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946
transcript_104779.known	chr4	-	611	6	FSM	ENSG00000145247.12	ENST00000381464.6	611	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	993.738879183058	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTCTAATGGAACAA	-6	True	NA	NA	False	TTTAAA	-23	NA	48906757	48885404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904635_48906657
transcript_104780.known	chr4	-	812	6	FSM	ENSG00000145247.12	ENST00000508069.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	812.464497685899	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	NA	False	NA	NA	False	AATAAA	-22	NA	48906937	48885381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48904483_48904612_48906657
transcript_104781.known	chr4	-	459	4	FSM	ENSG00000145247.12	ENST00000506226.6	459	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	1090.4990702528	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCTAATGGAACAAAAACA	38	False	48906796	NA	False	AATAAA	-4	NA	48906774	48885399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48894005_48894054_48904483_48904612_48906657
transcript_104782.known	chr4	-	636	6	FSM	ENSG00000145247.12	ENST00000273860.8	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	794.695312682792	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	24	False	NA	NA	False	AATAAA	-16	NA	48906788	48885387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_104784.known	chr4	+	4840	12	FSM	ENSG00000109184.15	ENST00000477560.5	4840	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	181.511969416131	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	48	False	NA	18	True	AATAAA	-25	NA	51843196	51916837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51887245_51891759_51891852_51899269_51899379_51908919_51908976_51911069_51911175_51913289_51913393_51913528
transcript_104786.known	chr4	+	4222	11	FSM	ENSG00000109184.15	ENST00000334635.10	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_8	69.7352851861954	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	4	True	NA	18	True	AATAAA	-25	NA	51843152	51916837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_104795.known	chr4	+	4207	10	FSM	ENSG00000109184.15	ENST00000381441.7	4207	10	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	102.710788979734	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	NA	False	NA	18	True	AATAAA	-25	NA	51843062	51916837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51913289_51913393_51913528
transcript_1048.known	chr1	+	686	2	FSM	ENSG00000169598.17	ENST00000461150.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	NA	False	NA	NA	False	AATAAA	-18	NA	3883506	3885429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_3883801_3885037
transcript_104803.known	chr4	+	949	5	FSM	ENSG00000109184.15	ENST00000513800.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	195.524934471284	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGACGTTATTATCAGAA	4	True	NA	NA	False	NA	NA	NA	51843152	51875328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51874720
transcript_104812.known	chr4	-	4248	6	FSM	ENSG00000163069.13	ENST00000381431.10	4248	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_4	76.8130197297307	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	-16	True	NA	-26	True	AATAAA	-15	NA	52038299	52020705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52033430_52033641_52038226
transcript_104818.nic	chr4	-	758	3	ISM	ENSG00000163069.13	ENST00000506357.5	663	5	-56	2718	-2	-2660	5prime_fragment	FALSE	canonical	3	109	junction_1	232	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAACAATTAAGAA	-18	True	NA	NA	False	GATAAA	-34	NA	52038301	52031488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_52031962_52033430_52033641_52038226
transcript_104824.known	chr4	-	663	5	FSM	ENSG00000163069.13	ENST00000506357.5	663	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	293.216963185966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGAAAAGTTTGAATGTT	998	False	NA	NA	False	NA	NA	NA	52038245	52028770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52028922_52029677_52029864_52031864_52031962_52033430_52033641_52038226
transcript_104829.known	chr4	-	7932	9	FSM	ENSG00000109189.13	ENST00000441222.8	7932	9	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_2	27.3698625316241	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCAGTATATTGTTCT	-26	True	NA	3	True	AATAAA	-27	NA	52659301	52590959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52659114
transcript_10483.known	chr1	+	1417	11	FSM	ENSG00000160752.15	ENST00000368356.9	1417	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	891.714393738264	5979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	-29	True	NA	13	True	AATAAA	-16	NA	155308865	155320665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_104832.known	chr4	-	4622	8	FSM	ENSG00000109189.13	ENST00000451218.6	4622	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	72.4898303916079	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTCTCTTTCTAGAGAA	-15	True	NA	-52	True	AATAAA	-16	NA	52659290	52594177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52659114
transcript_104833.nic	chr4	-	1419	5	ISM	ENSG00000109189.13	ENST00000441222.8	7932	9	-8	18959	-8	-12338	5prime_fragment	FALSE	canonical	3	164	junction_3	19.0656759649376	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-34	True	NA	NA	False	NA	NA	NA	52659309	52609918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52659114
transcript_104835.known	chr4	-	1589	10	FSM	ENSG00000109189.13	ENST00000514536.5	1589	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	87.7141823069552	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTATTTCAGTCTGAC	-23	True	NA	NA	False	NA	NA	NA	52659298	52597466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52597742_52598568_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52658173_52658282_52659114
transcript_104838.nic	chr4	-	1477	4	ISM	ENSG00000109189.13	ENST00000441222.8	7932	9	-875	35168	-875	0	5prime_fragment	FALSE	canonical	3	164	junction_2	9.20144916122817	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCAACATGAACGAACCT	NA	False	NA	NA	False	ATTAAA	-3	NA	52660176	52626127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_52626248_52627949_52628164_52631063_52631145_52659114
transcript_104843.nnic	chr4	-	716	2	Antisense	novelGene_ENSG00000250302.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCAGTCATCTAATTTG	NA	False	NA	1	True	AATAAA	-19	NA	52862210	52861142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_52861732_52862083
transcript_104849.known	chr4	+	667	2	FSM	ENSG00000226950.8	ENST00000676262.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	0	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTTGGGTCTCTTGTC	-5	True	NA	26	True	AATAAA	-11	NA	52712500	52714133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52713493
transcript_104850.known	chr4	+	122	1	FSM	ENSG00000212588.1	ENST00000391286.1	122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAGAAAAAGTTTCGTT	743	False	NA	24	True	NA	NA	NA	52713248	52713370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52713200_52713400
transcript_104851.known	chr4	+	987	3	FSM	ENSG00000226950.8	ENST00000411630.7	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1537	junction_1	586	14215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCTTGTCTTTTCTCT	NA	False	NA	34	True	AATAAA	-19	NA	52712324	52714141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493
transcript_104852.known	chr4	+	1644	5	FSM	ENSG00000226950.8	ENST00000675988.1	1644	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1110.27324902476	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGGAAAATGATATAT	-2	True	NA	NA	False	AATAAA	-20	NA	52712503	52721102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713703_52714198_52714239_52719867
transcript_104853.known	chr4	+	499	5	FSM	ENSG00000226950.8	ENST00000676199.1	499	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1129.36652597817	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTATTAGTGCCGTG	6	True	NA	NA	False	AATATA	-38	NA	52712511	52717188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52716930
transcript_104854.known	chr4	+	3959	4	FSM	ENSG00000226950.8	ENST00000676450.1	3959	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	722.904481165312	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGACAGAGCTATACTA	-5	True	NA	NA	False	NA	NA	NA	52712500	52723623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52714198_52714239_52719867
transcript_104855.known	chr4	-	3614	3	FSM	ENSG00000226887.8	ENST00000443173.6	3614	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGAAAGTGATTCACAT	3	True	NA	-28	True	AATAAA	-18	NA	52751425	52742552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52745944_52750929_52751070_52751342
transcript_104856.known	chr4	-	2744	4	FSM	ENSG00000226887.8	ENST00000440542.1	2744	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	24.1660919471891	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGCCCCCAAACACT	239	False	NA	-13	True	AATAAA	-24	NA	52751399	52743516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52745944_52750709_52750830_52750929_52751070_52751342
transcript_104857.known	chr4	+	2115	5	FSM	ENSG00000226950.8	ENST00000675590.1	2115	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1127.94547740571	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	NA	False	NA	NA	False	NA	NA	NA	52712453	52721683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867
transcript_104858.known	chr4	+	870	6	FSM	ENSG00000226950.8	ENST00000444958.2	870	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1096.52403530429	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	-5	True	NA	NA	False	NA	NA	NA	52712500	52721683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867_52720372_52721569
transcript_104860.known	chr4	+	1968	4	FSM	ENSG00000128045.7	ENST00000248706.5	1968	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	7.34846922834953	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTCTAACTTCGTCT	-1	True	NA	25	True	AATAAA	-17	NA	52862316	52866835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52862650_52863267_52863325_52864477_52864555_52865334
transcript_104861.known	chr4	+	661	2	FSM	ENSG00000128045.7	ENST00000515677.1	661	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTCTCCCTTCAAAACA	14	False	NA	NA	False	NA	NA	NA	52862331	52863610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52862650_52863267
transcript_104863.known	chr4	-	3162	9	FSM	ENSG00000184178.17	ENST00000401642.8	3162	9	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_3	14.1680759102992	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATTGTGGATTACA	-23	True	NA	NA	False	AATAAA	-17	NA	53366061	52872981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52874062_52885746_52885867_52907456_52907592_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
transcript_104865.known	chr4	-	3978	11	FSM	ENSG00000072201.14	ENST00000263925.8	3978	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	13.5679770046975	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGGAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	53591486	53459300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564_53478743_53481719_53481855_53496022_53496395_53498640_53498844_53507316_53507470_53507985_53508228_53573622_53574089_53591387
transcript_104867.nic	chr4	-	1221	4	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	79407	1155	29573	-1155	3prime_fragment	FALSE	canonical	3	17	junction_3	13.5973853695808	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCTTTTAGTATGTG	NA	False	NA	-1	True	AATAAA	-17	NA	53478810	53460455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564
transcript_10487.known	chr1	+	1478	11	FSM	ENSG00000160752.15	ENST00000356657.10	1478	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	894.955105019241	5844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	21	True	NA	13	True	AATAAA	-16	NA	155308915	155320665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155309077_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_104870.nic	chr4	-	3330	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81066	-1030	31232	1030	3prime_fragment	FALSE	canonical	3	41	junction_2	4	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATCTCAGATTTCTAA	NA	False	NA	NA	False	ATTAAA	-9	NA	53477151	53458270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_104871.nic	chr4	-	1145	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81066	1155	31232	-1155	3prime_fragment	FALSE	canonical	3	41	junction_2	4	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCTTTTAGTATGTG	NA	False	NA	-1	True	AATAAA	-17	NA	53477151	53460455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_104872.nic	chr4	-	971	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81066	1329	31232	-1329	3prime_fragment	FALSE	canonical	3	41	junction_2	4	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTATACCCCACTGA	NA	False	NA	NA	False	AATAAA	-21	NA	53477151	53460629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_104878.known	chr4	+	3396	18	FSM	ENSG00000145216.16	ENST00000337488.11	3396	18	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_1	107.073916195364	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTTGTGATTTTTCTG	-19	True	NA	24	True	TATAAA	-36	NA	53377640	53460862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_104888.known	chr4	+	2180	18	FSM	ENSG00000145216.16	ENST00000358575.9	2180	18	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_13	117.65626434573	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	-15	True	NA	76	True	AATAAA	-19	NA	53377644	53459668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_1049.known	chr1	-	1645	4	FSM	ENSG00000198912.12	ENST00000361605.4	1645	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	2.94392028877595	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAAGCAGTCGTATGT	-12	True	NA	-10	True	AATAAA	-17	NA	3900272	3889132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3890074_3890568_3891058_3892882_3892997_3900171
transcript_104917.nic	chr4	+	2100	16	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_7	96.1626862261149	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTGTCTTGTACTAT	NA	False	NA	26	True	AATAAA	-27	NA	53377578	53459618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_104918.nic	chr4	+	2150	16	NIC	ENSG00000145216.16	novel	2180	18	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_7	96.1626862261149	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	NA	False	NA	76	True	AATAAA	-19	NA	53377578	53459668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_104925.known	chr4	+	1878	15	FSM	ENSG00000145216.16	ENST00000306932.10	1878	15	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_8	101.481072931189	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	-6	True	NA	29	True	AATAAA	-30	NA	53377695	53459621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_104932.known	chr4	+	1070	7	FSM	ENSG00000145216.16	ENST00000513008.5	1070	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	64.5617705939221	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	NA	False	NA	29	True	AATAAA	-30	NA	53425835	53459621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_104933.known	chr4	+	628	2	FSM	ENSG00000248494.1	ENST00000509974.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATAGTCATTCCACCG	NA	False	NA	NA	False	CATAAA	-16	NA	53592955	53604047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53593073_53603536
transcript_104934.known	chr4	-	1109	6	FSM	ENSG00000109220.11	ENST00000263921.8	1109	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	17.5840837122666	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCAGCCTTTTTTATTT	-3	True	NA	-10	True	CATAAA	-3	NA	54064605	54009788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54048954_54049111_54049250_54049306_54064181
transcript_104935.known	chr4	+	1146	5	FSM	ENSG00000134853.12	ENST00000507536.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	6.72681202353685	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCATGTAGCTTGTA	NA	False	NA	8	True	AATAAA	-17	NA	54277175	54281977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_54277493_54277895_54278007_54278361_54278516_54280315_54280483_54281580
transcript_104937.nic	chr4	+	803	2	ISM	ENSG00000134853.12	ENST00000461294.2	480	3	290	0	-135	0	3prime_fragment	FALSE	canonical	3	24	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTTTTGGTATC	NA	False	NA	NA	False	ATTAAA	-21	NA	54277040	54278246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_54277493_54277895
transcript_104938.known	chr4	+	5147	21	FSM	ENSG00000157404.17	ENST00000288135.6	5147	21	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	79.6018215871974	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	-3	True	NA	15	True	AATAAA	-20	NA	54657956	54740715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
transcript_104939.known	chr4	+	538	2	FSM	ENSG00000157404.17	ENST00000514582.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTCTTCACTGTT	0	True	NA	NA	False	GATAAA	-31	NA	54657938	54695906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_54658082_54695511
transcript_104940.known	chr4	-	213	1	FSM	ENSG00000244422.3	ENST00000484463.3	213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGACACACTGATCTAAA	NA	False	NA	NA	False	NA	NA	NA	54976371	54976158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_54976200_54976400
transcript_104941.known	chr4	-	5833	30	FSM	ENSG00000128052.10	ENST00000263923.5	5833	30	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_27	31.9526626684731	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCCCTTTGCAAGGTTG	-1	True	NA	-13	True	ATTAAA	-20	NA	55125595	55078480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55080164_55081955_55082042_55082535_55082636_55087606_55087759_55088867_55088974_55089373_55089474_55089690_55089803_55089955_55090079_55092616_55092715_55094801_55094956_55095576_55095666_55096228_55096343_55097661_55097767_55098136_55098273_55098696_55098804_55101896_55102029_55102361_55102509_55104642_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_104942.nic	chr4	-	1866	11	ISM	ENSG00000128052.10	ENST00000512566.1	2037	13	-329	2093	-27	-2093	5prime_fragment	FALSE	canonical	3	107	junction_8	16.9944108459223	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTTTGAAGTTTTAAAAT	NA	False	NA	NA	False	AATAAA	-35	NA	55125622	55106685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_104947.known	chr4	+	4061	5	FSM	ENSG00000128039.13	ENST00000264228.9	4061	5	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_3	15.1389398572027	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGTCGAATTTCTTT	-9	True	NA	NA	False	ATTAAA	-21	NA	55346241	55373100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55367587_55367723_55369831
transcript_104948.known	chr4	+	2766	4	FSM	ENSG00000128039.13	ENST00000679836.1	2766	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	128.224629286091	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGTGCTGGGATTACA	95	False	NA	NA	False	NA	NA	NA	55346212	55371911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55369831
transcript_104951.known	chr4	+	768	3	FSM	ENSG00000128039.13	ENST00000505210.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	106.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGTCCACTTTCTGA	56	False	NA	21	True	AATAAA	-21	NA	55346411	55370310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55346558_55359345_55359489_55369831
transcript_104954.known	chr4	+	323	1	FSM	ENSG00000273257.2	ENST00000609511.1	323	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGAGTGTCTTCTACA	NA	False	NA	NA	False	ATTAAA	-15	NA	55387948	55388271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55387900_55388300
transcript_104962.known	chr4	-	567	4	FSM	ENSG00000134852.15	ENST00000513033.1	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	7.78888096369861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGTAGATAGTTTCCAG	297	False	NA	NA	False	NA	NA	NA	55546646	55486393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55486550_55489373_55489466_55509911_55510066_55546481
transcript_104964.nic	chr4	-	454	3	ISM	ENSG00000134852.15	ENST00000513033.1	567	4	16	2921	16	-2921	5prime_fragment	FALSE	canonical	3	15	junction_2	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCATCAACTATTTTGA	-14	True	NA	NA	False	AATAAA	-2	NA	55546630	55489314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_55489466_55509911_55510066_55546481
transcript_104966.known	chr4	-	426	2	FSM	ENSG00000134852.15	ENST00000479384.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTTAAAGACTTCA	NA	False	NA	NA	False	AATAAA	-14	NA	55443755	55442277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55442635_55443686
transcript_104967.known	chr4	-	476	4	FSM	ENSG00000134852.15	ENST00000509151.5	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	7.58653778449403	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTGTAGTAAAATGAGC	288	False	NA	NA	False	NA	NA	NA	55546655	55482772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55482829_55489373_55489466_55509911_55510066_55546481
transcript_104968.known	chr4	+	1931	6	FSM	ENSG00000134851.13	ENST00000381334.10	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	23.2120658279266	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTTCCTTGTGTGTC	-4	True	NA	21	True	AATAAA	-17	NA	55395956	55426175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55396397_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
transcript_104970.known	chr4	+	778	1	FSM	ENSG00000272969.1	ENST00000609234.1	778	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTTTCTGGCCGTAAA	NA	False	NA	NA	False	AATAAA	-24	NA	55547111	55547889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55547100_55547900
transcript_104980.known	chr4	-	816	10	FSM	ENSG00000109255.11	ENST00000264218.7	816	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_9	21.7942114865619	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-2	True	NA	-17	True	ATTAAA	-14	NA	55636298	55595230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_104981.nic	chr4	-	871	10	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-118	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_9	46.2769441034686	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	55636816	55595230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
transcript_104982.nnic	chr4	-	709	10	NNC	ENSG00000109255.11	novel	816	10	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_9	61.7053932452874	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	55636812	55595230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636701
transcript_104988.known	chr4	-	756	9	FSM	ENSG00000109255.11	ENST00000511469.5	756	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_7	60.5411791675716	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTAGTGTTTTAATGA	509	False	NA	-15	True	ATTAAA	-16	NA	55636284	55595228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636080
transcript_104989.nic	chr4	-	804	9	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	71.2459428669451	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-4	True	NA	-17	True	ATTAAA	-14	NA	55636797	55595230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636543
transcript_104992.known	chr4	-	616	9	FSM	ENSG00000109255.11	ENST00000515325.5	616	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.8756260407885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAAATCCCTGTGTTGT	-2	True	NA	-103	True	NA	NA	NA	55636698	55595316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
transcript_104994.known	chr4	-	658	9	FSM	ENSG00000109255.11	ENST00000507338.1	658	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	63.5136550278757	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACAATGTTGTAAATGT	-1	True	NA	-70	True	NA	NA	NA	55636268	55595283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_104995.nic	chr4	-	869	9	NIC	ENSG00000109255.11	novel	816	10	NA	NA	-191	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	73.339855297103	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	NA	False	NA	-17	True	ATTAAA	-14	NA	55636889	55595230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_55595412_55599141_55599182_55600521_55600576_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636543
transcript_105009.known	chr4	+	894	3	FSM	ENSG00000250821.3	ENST00000636125.2	894	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATGCATTTTAATGTA	2687	False	NA	NA	False	AATAAA	-27	NA	55819789	55837489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55820148_55831333_55831465_55837084
transcript_105012.known	chr4	+	3592	19	FSM	ENSG00000090989.18	ENST00000381295.7	3592	19	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	16.5310220905431	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACAAAAATTAATTGCAA	-71	True	NA	79	True	ATTAAA	-21	NA	55853647	55905086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_105013.known	chr4	+	3357	19	FSM	ENSG00000090989.18	ENST00000346134.11	3357	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	23.3685580679005	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	-44	True	NA	27	True	AATAAA	-44	NA	55853674	55905034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_105014.nic	chr4	+	3489	18	NIC	ENSG00000090989.18	novel	3592	19	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	26.577171045114	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTGACATTTGATA	NA	False	NA	0	True	AATAAA	-17	NA	55853626	55905007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_105015.known	chr4	+	3248	18	FSM	ENSG00000090989.18	ENST00000349598.6	3248	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	31.2871509273182	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	20	True	NA	27	True	AATAAA	-44	NA	55853738	55905034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_105017.nic	chr4	+	2596	17	ISM	ENSG00000090989.18	ENST00000381295.7	3592	19	-21	5280	-21	-4771	5prime_fragment	FALSE	canonical	3	86	junction_10	15.4550760269887	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGCCAAACAAAAATACAC	NA	False	NA	NA	False	NA	NA	NA	55853626	55899806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684
transcript_10502.known	chr1	+	1196	9	FSM	ENSG00000160752.15	ENST00000611010.4	1196	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	761.648376877414	3350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTCTGTTCTTGCTC	3936	False	NA	14	True	AATAAA	-17	NA	155308747	155320666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_105021.nnic	chr4	+	1638	9	NNC	ENSG00000090989.18	novel	3592	19	NA	NA	-21	6470	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_8	37.7979827504061	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCATTCAATTTCTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	55853626	55875223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55874996
transcript_105026.known	chr4	+	5596	26	FSM	ENSG00000174799.11	ENST00000257287.5	5596	26	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_14	10.8406641862941	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTCTTTCTTACA	-4	True	NA	13	True	AATAAA	-13	NA	55948944	56033361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681_55959767_55964273_55964403_55965643_55965860_55969062_55969129_55971269_55971409_55974745_55974970_55980142_55980296_55981226_55981380_55985280_55985359_55991933_55992086_55999301_55999418_55999490_55999646_56008326_56008383_56009734_56009904_56011411_56011523_56011799_56011986_56017647_56017858_56019352_56019556_56020675_56020781_56024500_56024615_56031359
transcript_105030.known	chr4	+	2092	6	FSM	ENSG00000174799.11	ENST00000422247.6	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	5.27636238330917	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	43	False	NA	NA	False	NA	NA	NA	55948870	55960925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681
transcript_105037.known	chr4	-	3581	15	FSM	ENSG00000157426.14	ENST00000205214.11	3581	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.54400374531753	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	-29	True	NA	NA	False	ATTAAA	-25	NA	56387491	56338289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_105038.known	chr4	-	3480	14	FSM	ENSG00000157426.14	ENST00000602986.5	3480	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	16.0029583063949	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTACACTTGATT	NA	False	NA	NA	False	ATTAAA	-28	NA	56387508	56338286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56384069_56384342_56387361
transcript_105039.known	chr4	-	3241	14	FSM	ENSG00000157426.14	ENST00000513376.5	3241	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	16.1340538088756	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	39	True	NA	NA	False	ATTAAA	-25	NA	56387423	56338289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56387361
transcript_105040.known	chr4	-	1222	3	FSM	ENSG00000157426.14	ENST00000510012.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTTGCCCATTTTC	-10	True	NA	NA	False	TATAAA	-16	NA	56387472	56381758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56382598_56384069_56384342_56387361
transcript_105041.known	chr4	-	3004	11	FSM	ENSG00000157426.14	ENST00000502617.1	3004	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	6.24579858785088	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTCATAGTTTCT	-38	True	NA	5	True	NA	NA	NA	56387500	56348927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_105042.known	chr4	-	3682	11	FSM	ENSG00000128059.8	ENST00000264220.6	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_6	34.5179663363878	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-12	True	NA	-11	True	GATAAA	-24	NA	56435615	56393361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_105043.known	chr4	-	563	5	FSM	ENSG00000128059.8	ENST00000507724.1	563	5	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_3	231.154034141738	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTATTCCAGTGTCTGA	-2	True	NA	NA	False	NA	NA	NA	56435496	56403073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56403186_56403288_56403402_56406494_56406619_56407649_56407717_56435349
transcript_105052.known	chr4	+	3339	10	FSM	ENSG00000128050.9	ENST00000264221.6	3339	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	899.013011619814	4689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGTCTCTGAAGTCAC	-6	True	NA	32	True	ATTAAA	-25	NA	56435748	56461368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56435929_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_105053.known	chr4	+	1514	10	FSM	ENSG00000128050.9	ENST00000505164.5	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	900.532188332112	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGCTGACAAGAAAAT	-3	True	NA	-88	True	NA	NA	NA	56435751	56459499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56435976_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_105065.known	chr4	+	6371	9	FSM	ENSG00000128050.9	ENST00000512576.3	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	2648	junction_2	243.876505633487	4138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTTTGTTGTCAG	5	True	NA	2	True	AATAAA	-14	NA	56436259	56464578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_105067.known	chr4	+	3855	19	FSM	ENSG00000174780.17	ENST00000642900.1	3855	19	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_14	71.001999624076	1786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTTTTGGGTGTTG	1	True	NA	14	True	AATAAA	-23	NA	56467616	56503681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_105076.nic	chr4	+	1743	17	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-48	8289	-48	0	5prime_fragment	FALSE	canonical	3	476	junction_14	72.0368558013882	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGTAAGGCATTAAAAAAGT	7105	False	NA	NA	False	AAAAAG	-18	NA	56467568	56495392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356
transcript_105077.known	chr4	+	2406	17	FSM	ENSG00000174780.17	ENST00000510663.6	2406	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	160.572206791057	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAAATTTTCTGTCATGT	1	True	NA	NA	False	AATAAA	-23	NA	56467616	56502415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_10508.known	chr1	+	3436	10	FSM	ENSG00000160753.16	ENST00000368352.10	3436	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	129.945287632056	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	-31	True	NA	24	True	AATAAA	-15	NA	155320893	155331114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_105092.nic	chr4	+	922	9	ISM	ENSG00000174780.17	ENST00000642900.1	3855	19	-48	20513	-48	5996	5prime_fragment	FALSE	canonical	3	502	junction_8	83.0202347322627	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAATTAACCAATGCGGA	7105	False	NA	NA	False	GATAAA	-45	NA	56467568	56483168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138
transcript_105098.known	chr4	+	745	5	FSM	ENSG00000174780.17	ENST00000504757.2	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_4	65.8217289350561	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCTCCAAGTTCCTGT	2	True	NA	NA	False	ATTAAA	-22	NA	56467617	56474508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279
transcript_105099.nnic	chr4	+	782	4	NNC	ENSG00000196503.5	novel	1392	4	NA	NA	-253	-465	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCAGTGCATGGGATG	215	False	NA	6	True	AATAAA	-18	NA	56505537	56523983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_56505694_56511184_56511348_56518677_56518854_56523696
transcript_10510.known	chr1	+	3114	10	FSM	ENSG00000160753.16	ENST00000368354.7	3114	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	145.052055364383	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	-29	True	NA	22	True	AATAAA	-13	NA	155320895	155331112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_105101.known	chr4	+	1447	4	FSM	ENSG00000196503.5	ENST00000640821.3	1447	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1.24721912892465	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGTCCCATTTATTGT	0	True	NA	NA	False	AATGAA	-10	NA	56505790	56524453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56506142_56511184_56511348_56518677_56518854_56523696
transcript_105106.known	chr4	-	722	4	FSM	ENSG00000128040.12	ENST00000506738.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	12	True	NA	1	True	AATAAA	-17	NA	56821701	56809860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821457
transcript_105107.known	chr4	-	659	4	FSM	ENSG00000128040.12	ENST00000504762.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.05480466765633	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATTCAGTTCCTACT	19	True	NA	-10	True	AATAAA	-6	NA	56821694	56809871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821502
transcript_105108.known	chr4	-	613	4	FSM	ENSG00000128040.12	ENST00000248701.8	613	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-29	True	NA	1	True	AATAAA	-17	NA	56821742	56809860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821607
transcript_10511.known	chr1	+	2503	9	FSM	ENSG00000160753.16	ENST00000368347.8	2503	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	86.1560176366109	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	12	True	NA	24	True	AATAAA	-15	NA	155323936	155331114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_105110.nnic	chr4	-	534	3	NIC	ENSG00000128040.12	novel	613	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	6	True	NA	1	True	AATAAA	-17	NA	56821707	56809860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_56810185_56811684_56811795_56821607
transcript_105112.nnic	chr4	-	498	3	NIC	ENSG00000128040.12	novel	613	4	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-24	True	NA	1	True	AATAAA	-17	NA	56821737	56809860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_56810185_56820535_56820580_56821607
transcript_105114.known	chr4	+	7309	4	FSM	ENSG00000084093.19	ENST00000309042.12	7309	4	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_1	43.4920171474669	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCCTTTGTTTATTATT	-13	True	NA	9	True	AATAAA	-14	NA	56907899	56935844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56908214_56910629_56911537_56919786_56919871_56929840
transcript_105116.nic	chr4	+	1428	4	NIC	ENSG00000084093.19	novel	7069	5	NA	NA	-59	-1990	intron_retention	FALSE	canonical	3	64	junction_1	132.033665740556	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGAAATAGAACAAACAAAA	23	True	NA	NA	False	AATGAA	-5	NA	56908956	56930194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_56909040_56910629_56911537_56919786_56919871_56929840
transcript_105119.nnic	chr4	+	1810	4	NNC	ENSG00000084093.19	novel	7371	4	NA	NA	34	-1692	intron_retention	FALSE	canonical	2	7	junction_1	158.896891795347	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGTAGAAAGCAAATCCA	41	False	NA	-54	True	AAAAAG	-6	NA	56909049	56930492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_56909217_56910629_56911537_56919786_56919871_56929840
transcript_105120.known	chr4	+	7371	4	FSM	ENSG00000084093.19	ENST00000675105.1	7371	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	158.896891795347	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	181	False	NA	-13	True	NA	NA	NA	56909189	56935822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56909588_56910629_56911537_56919786_56919871_56929840
transcript_105121.known	chr4	-	447	1	FSM	ENSG00000269949.1	ENST00000602820.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTTGTTGTAGACCTT	NA	False	NA	-3	True	ATTAAA	-26	NA	56961373	56960926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56960900_56961400
transcript_105122.known	chr4	-	2218	7	FSM	ENSG00000084092.7	ENST00000264230.5	2218	7	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	22.5419362275934	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTTTCTTTTTTCTT	-11	True	NA	-9	True	AATAAA	-14	NA	56977606	56963349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56963662_56964405_56964527_56966619_56966737_56968383_56968516_56973147_56973354_56973857_56974023_56976441
transcript_105123.known	chr4	+	4108	26	FSM	ENSG00000047315.17	ENST00000381227.5	4108	26	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	115.020373847419	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	1	True	NA	32	True	AATAAA	-16	NA	56977741	57031158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56977809_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_105131.known	chr4	+	3785	25	FSM	ENSG00000047315.17	ENST00000314595.6	3785	25	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_12	61.6785461530633	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	0	True	NA	32	True	AATAAA	-16	NA	56978895	57031158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_105132.known	chr4	+	551	2	FSM	ENSG00000047315.17	ENST00000497845.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAACTGCAGACATA	8	True	NA	NA	False	NA	NA	NA	56978903	56986803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56979005_56986353
transcript_105133.known	chr4	+	3666	24	FSM	ENSG00000047315.17	ENST00000431623.6	3666	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	117.918894942664	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	-1	True	NA	32	True	AATAAA	-16	NA	56978863	57031158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56979005_56986353_56986427_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_105144.nic	chr4	+	1774	5	ISM	ENSG00000150471.17	ENST00000512091.6	12636	26	-191	400943	-191	0	5prime_fragment	FALSE	canonical	2	10	junction_2	3.80788655293195	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGACCAGAAAGAAAAAATAA	326	False	NA	NA	False	AATATA	-17	NA	61201066	61677392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_61201766_61383123_61383190_61497120_61497349_61587226_61587441_61676825
transcript_105147.nnic	chr4	-	1859	4	NNC	ENSG00000289308.1	novel	550	2	NA	NA	-118	55172	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.5269119345812	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6495	False	NA	NA	False	NA	NA	NA	61769767	61694215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_61695567_61704217_61704301_61752123_61752176_61769394
transcript_105161.known	chr4	-	390	1	FSM	ENSG00000225405.3	ENST00000470598.1	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	31	False	NA	-50	True	AAAACA	-35	NA	62106049	62105659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_62105700_62106000
transcript_105163.known	chr4	+	870	1	FSM	ENSG00000243199.1	ENST00000466377.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	18	False	NA	NA	False	NA	NA	NA	65573458	65574328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_65573500_65574300
transcript_105165.known	chr4	+	422	2	FSM	ENSG00000250846.6	ENST00000514260.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATTTAGTCATCTCTG	939	False	NA	NA	False	AATAAA	-18	NA	65670529	65693386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_65670674_65693108
transcript_105167.known	chr4	-	6823	19	FSM	ENSG00000145241.11	ENST00000273853.11	6823	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	13.3041346956501	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGTGTAAATTTAAG	-10	True	NA	-11	True	AATAAA	-23	NA	67545503	67468761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_105172.nic	chr4	-	1511	8	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-103	20853	-103	-2208	5prime_fragment	FALSE	canonical	3	70	junction_4	10.8062717994728	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAAGAAAATTCATGGC	NA	False	NA	NA	False	TATAAA	-8	NA	67545606	67514257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_105175.nic	chr4	-	867	6	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-103	25813	-103	-7168	5prime_fragment	FALSE	canonical	3	70	junction_2	10.4307238483242	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAACATTTTATTTAAATA	NA	False	NA	NA	False	AGTAAA	-45	NA	67545606	67519217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_105179.nic	chr4	-	971	5	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-103	37021	-103	-18376	5prime_fragment	FALSE	canonical	3	70	junction_1	11.5406888875838	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGTGTTTGTATGTGT	NA	False	NA	NA	False	CATAAA	-15	NA	67545606	67530425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_105180.known	chr4	-	9540	33	FSM	ENSG00000033178.13	ENST00000322244.10	9540	33	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_25	23.2452742173006	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTGCACATTTTTTTAA	-9	True	NA	-8	True	AATAAA	-21	NA	67701155	67612651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67619133_67622830_67622926_67623134_67623223_67624125_67624254_67624993_67625188_67626359_67626478_67629070_67629143_67630465_67630536_67631707_67631772_67631856_67631909_67633344_67633474_67634241_67634323_67634428_67634519_67635452_67635559_67638942_67639125_67641150_67641229_67644697_67644779_67645937_67646017_67646723_67646792_67649067_67649212_67662188_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_105184.known	chr4	-	1664	13	FSM	ENSG00000033178.13	ENST00000420827.2	1664	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	30.2696217353306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGAAGATTCTATTAT	-7	True	NA	NA	False	TATAAA	-20	NA	67701153	67661662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_105186.nic	chr4	-	1773	12	ISM	ENSG00000033178.13	ENST00000420827.2	1664	13	-37	811	-35	13	5prime_fragment	FALSE	canonical	3	104	junction_4	28.9288097414645	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAACTAAACTTATT	NA	False	NA	NA	False	NA	NA	NA	67701190	67662473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_105187.known	chr4	-	2387	11	FSM	ENSG00000033178.13	ENST00000429659.7	2387	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	29.8008389143661	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	-2	True	NA	NA	False	NA	NA	NA	67701148	67662486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_105188.nic	chr4	-	717	8	ISM	ENSG00000033178.13	ENST00000429659.7	2387	11	-42	8006	-35	7937	5prime_fragment	FALSE	canonical	3	158	junction_3	18.630674727887	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCATTTCAAACATAACG	NA	False	NA	NA	False	AAGAAA	-1	NA	67701190	67670492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_105190.known	chr4	+	1424	4	FSM	ENSG00000248049.8	ENST00000665498.1	1424	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5848929700813	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCATGGTGGTGCATGCC	21	True	NA	NA	False	ACTAAA	-16	NA	67701389	67732596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67728539_67728687_67730079_67730171_67731505
transcript_105192.nic	chr4	+	502	3	FSM	ENSG00000248049.8	ENST00000693410.1	477	3	-29	4	-6	-4	multi-exon	FALSE	canonical	3	23	junction_2	6.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCCTATGGTATTTTAA	-17	True	NA	7	True	ATTAAA	-17	NA	67701254	67730198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67728539_67728687_67730073
transcript_105193.nnic	chr4	+	1622	3	NIC	ENSG00000248049.8	novel	1609	4	NA	NA	-6	28	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	17.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCAAGGCAAGTT	-17	True	NA	NA	False	NA	NA	NA	67701254	67732750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_67701485_67728539_67728687_67731505
transcript_105194.known	chr4	+	1445	3	FSM	ENSG00000248049.8	ENST00000498917.2	1445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATTTGCGCTGGTGTT	8	True	NA	9	True	AATAAA	-1	NA	67701279	67722505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67720421_67720633_67721476
transcript_105195.known	chr4	+	2595	3	FSM	ENSG00000248049.8	ENST00000654961.1	2595	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	12.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTCCAAATATTTTA	-11	True	NA	-9	True	NA	NA	NA	67701260	67723217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67720421_67721052_67721476
transcript_105197.known	chr4	+	2233	2	FSM	ENSG00000248049.8	ENST00000506606.1	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCTATTTGCGCTGGT	-36	True	NA	6	True	ATTAAA	-14	NA	67701332	67722502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67720421
transcript_105199.known	chr4	-	6233	17	FSM	ENSG00000083896.13	ENST00000344157.9	6233	17	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_16	45.3650126749679	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTCTTAAACACAGACT	15	False	68350105	NA	False	AATAAA	-26	NA	68350090	68310386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_10520.known	chr1	+	1968	9	FSM	ENSG00000160753.16	ENST00000368349.8	1968	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	77.5914782692017	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	5	True	NA	22	True	AATAAA	-13	NA	155324512	155331112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_105200.known	chr4	-	2983	17	FSM	ENSG00000083896.13	ENST00000579690.5	2983	17	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	58.7084959780099	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATCTTTTGTATCTTTT	28	True	NA	-25	True	AATAAA	-16	NA	68349753	68313323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318754_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_105205.known	chr4	-	265	2	FSM	ENSG00000083896.13	ENST00000505251.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTCAGCCACAGAGTAT	NA	False	NA	-36	True	NA	NA	NA	68338412	68337765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_68337901_68338282
transcript_105211.known	chr4	+	2122	10	FSM	ENSG00000087128.10	ENST00000305363.9	2122	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.71648055986996	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTTGACATTATGATAT	-2	True	NA	3	True	AATAAA	-15	NA	68447462	68497604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_68447524_68461820_68461946_68466630_68466753_68468878_68468947_68471459_68471624_68474722_68474762_68476260_68476439_68477368_68477629_68478848_68478992_68496642
transcript_105212.known	chr4	-	477	2	FSM	ENSG00000272626.1	ENST00000608365.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGGCACTCATTTT	230	False	NA	NA	False	AATAAA	-21	NA	68906983	68901007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_68901376_68906874
transcript_105214.nnic	chr4	+	439	3	NNC	ENSG00000145309.6	novel	1517	2	NA	NA	-21097	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTGTGTAGGTGTGT	NA	False	NA	14	True	AATAAA	-21	NA	70313883	70337116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_70314098_70314802_70314877_70336965
transcript_105215.known	chr4	+	2020	1	FSM	ENSG00000132467.4	ENST00000254803.4	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	793	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATATGTTCTGTGTGGT	-5	True	NA	10	True	AATAAA	-22	NA	70688531	70690551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70688500_70690600
transcript_105217.known	chr4	-	1794	10	FSM	ENSG00000132463.15	ENST00000502323.5	1794	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	234.194969951571	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACAGCTTAGTGTAAAT	4249	False	NA	NA	False	TTTAAA	-16	NA	70839001	70820311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70838868
transcript_105218.known	chr4	-	1765	10	FSM	ENSG00000132463.15	ENST00000514161.5	1765	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	228.456657693411	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAATTTTGCTGTATT	3907	False	NA	NA	False	NA	NA	NA	70839343	70820374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839176
transcript_105219.known	chr4	-	2491	10	FSM	ENSG00000132463.15	ENST00000499044.6	2491	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	232.07948829849	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	3747	False	NA	-9	True	AATAAA	-32	NA	70839503	70819757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839227
transcript_105228.known	chr4	-	6610	10	FSM	ENSG00000132463.15	ENST00000254799.11	6610	10	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_5	69.9181178942665	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGTGAACCTACATT	-6	True	NA	-10	True	AATAAA	-21	NA	70839890	70815782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470
transcript_105232.known	chr4	+	6930	6	FSM	ENSG00000173542.9	ENST00000309395.7	6930	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	10.6282642044691	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTTGCATTACTGT	16	True	NA	6	True	AATAAA	-21	NA	70902368	70988168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152_70975287_70979127_70979292_70981979
transcript_105237.nnic	chr4	+	670	3	NNC	ENSG00000173542.9	novel	2056	4	NA	NA	-32	-14017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTATTGTGCTTTACT	NA	False	NA	NA	False	AGTAAA	-33	NA	70902293	70961237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_70902551_70958873_70959041_70960991
transcript_105238.nnic	chr4	-	801	2	FSM	ENSG00000289019.1	ENST00000691317.1	806	2	1	4	1	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTGTATGTA	NA	False	NA	3	True	ATTAAA	-15	NA	70902251	70899219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70899718_70901948
transcript_105240.known	chr4	+	2056	4	FSM	ENSG00000173542.9	ENST00000509041.5	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	9.56846672960488	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAATTACATATATATAT	-6	True	NA	NA	False	AATAAA	-17	NA	70902346	70976743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152
transcript_105242.known	chr4	+	2506	7	FSM	ENSG00000156136.10	ENST00000286648.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	10.6926766215636	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	50	True	NA	27	True	AATAAA	-31	NA	70993648	71030914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70993927_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_105245.known	chr4	+	2683	7	FSM	ENSG00000156136.10	ENST00000503359.5	2683	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	91.7637364830647	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	-36	True	NA	27	True	AATAAA	-31	NA	70993562	71030914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70994018_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_105249.nic	chr4	+	1117	2	ISM	ENSG00000156136.10	ENST00000286648.10	2506	7	32	31977	32	5057	5prime_fragment	FALSE	canonical	3	247	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAGTAAAATTTATCAA	1	True	NA	NA	False	NA	NA	NA	70993680	70998937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_70993927_70998066
transcript_105250.nnic	chr4	+	1028	3	Antisense	novelGene_ENSG00000145321.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTGGGGGGAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	71638537	71753497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_71639031_71722023_71722238_71753176
transcript_105252.nnic	chr4	+	827	2	Antisense	novelGene_ENSG00000145321.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTTGGGGGGAGGAGGG	NA	False	NA	NA	False	NA	NA	NA	71638524	71753497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_71639031_71753176
transcript_105254.known	chr4	+	1964	4	FSM	ENSG00000056291.19	ENST00000308744.12	1964	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCTGTTGTTTTTCT	-3	True	NA	NA	False	TATAAA	-42	NA	72031999	72148305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_72032201_72128584_72128920_72138039_72138140_72146977
transcript_105257.known	chr4	+	1234	3	FSM	ENSG00000056291.19	ENST00000344413.6	1234	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTAGTGTGATAATC	NA	False	NA	NA	False	ATTAAA	-29	NA	72031901	72147812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_72032201_72138039_72138140_72146977
transcript_105261.known	chr4	-	6244	22	FSM	ENSG00000156140.10	ENST00000286657.10	6244	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	4.00339991561594	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGCTCTATCTAGATT	3	True	NA	NA	False	AATAAA	-18	NA	72569221	72280968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_72283705_72288750_72288869_72290854_72291063_72295653_72295787_72298276_72298443_72303916_72304081_72305986_72306068_72309396_72309521_72311047_72311182_72312290_72312467_72313676_72313823_72315857_72315972_72318571_72318705_72319331_72319476_72319857_72319964_72320713_72320871_72323013_72323098_72339493_72339694_72414814_72414972_72548477_72548885_72567373_72567402_72568693
transcript_105265.nnic	chr4	-	2356	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1169043222683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGTCATTTCTTTGA	NA	False	NA	-10	True	AATAAA	-19	NA	73069767	73056083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_73057167_73057960_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_105266.nnic	chr4	-	2481	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-12	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.1169043222683	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGTCATTTCTTTGA	NA	False	NA	-10	True	AATAAA	-19	NA	73069767	73056083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_73057234_73057902_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_105269.known	chr4	-	1083	6	FSM	ENSG00000163626.17	ENST00000510031.1	1083	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	15.3022874107109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTTCCAATAATTTTG	4	True	NA	NA	False	AAGAAA	-5	NA	73069726	73058113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068134_73069316
transcript_105272.nnic	chr4	-	1400	4	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-12	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	21.9241115365405	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATTTCTTTGATTGA	NA	False	NA	-6	True	AATAAA	-23	NA	73069767	73056079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_73056849_73065334_73065414_73068028_73068130_73069316
transcript_105273.nnic	chr4	-	822	4	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-12	-578	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	21.9241115365405	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACATTGATCTTGAGTTA	NA	False	NA	-15	True	AATAAA	-17	NA	73069767	73056657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_73056849_73065334_73065414_73068028_73068130_73069316
transcript_105275.nic	chr4	-	789	3	ISM	ENSG00000163626.17	ENST00000295890.8	6846	6	-26	12815	-12	3374	5prime_fragment	FALSE	canonical	3	46	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATACTTTTCATAAT	NA	False	NA	NA	False	ACTAAA	-18	NA	73069767	73065176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_73065414_73068028_73068130_73069316
transcript_105277.known	chr4	-	3027	5	FSM	ENSG00000163626.17	ENST00000449739.6	3027	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	20.6215906273013	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATTTCTTTGATTGA	-11	True	NA	-6	True	AATAAA	-23	NA	73069741	73056079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73069316
transcript_105278.known	chr4	-	7734	33	FSM	ENSG00000132466.20	ENST00000330838.10	7734	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	60.712951666016	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTACTGGTGTAATTT	-2	True	NA	NA	False	ATTAAA	-17	NA	73258798	73075685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73076291_73076939_73077105_73077354_73077534_73078641_73078891_73085248_73085447_73090666_73092301_73094078_73094229_73097116_73097273_73098072_73098521_73102375_73102548_73113791_73113909_73115820_73115917_73118687_73118851_73120161_73120338_73120880_73121095_73121616_73121760_73124912_73125059_73125200_73125313_73135116_73135266_73141740_73141844_73142241_73142386_73142639_73142768_73144744_73144833_73146763_73146874_73147240_73147433_73148812_73149051_73151429_73151525_73153879_73154114_73155630_73155779_73156018_73156167_73161191_73161349_73177379_73177534_73258275
transcript_105281.known	chr4	-	563	3	FSM	ENSG00000132466.20	ENST00000560507.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATGTGTGTGTGTG	5930	False	NA	NA	False	NA	NA	NA	73104080	73100860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73101174_73102375_73102548_73104002
transcript_105286.nnic	chr4	+	719	5	NNC	ENSG00000250220.1	novel	685	5	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.4790199457749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATTCTTGTATTATC	10	True	NA	NA	False	TATAAA	-17	NA	73259190	73317953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_73259409_73269823_73269954_73302263_73302386_73307059_73307182_73317826
transcript_105287.nnic	chr4	+	612	4	NNC	ENSG00000250220.1	novel	685	5	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATTCTTGTATTATC	-13	True	NA	NA	False	TATAAA	-17	NA	73259167	73317953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_73259409_73302263_73302386_73307059_73307182_73317826
transcript_105288.nnic	chr4	+	748	4	NNC	ENSG00000250220.1	novel	685	5	NA	NA	-41	35650	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.62466929133727	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTTTTGGTACCTTAT	-13	True	NA	NA	False	AATAAA	-20	NA	73259167	73353603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_73259409_73302263_73302386_73349771_73349897_73353343
transcript_105290.nnic	chr4	+	490	3	NIC	ENSG00000250220.1	novel	685	5	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATTCTTGTATTATC	-13	True	NA	NA	False	TATAAA	-17	NA	73259167	73317953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_73259409_73302263_73302386_73317826
transcript_105291.known	chr4	+	685	5	FSM	ENSG00000250220.1	ENST00000502790.1	685	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATTCTTGTATTATC	28	False	NA	NA	False	TATAAA	-17	NA	73259208	73317953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73259409_73269823_73269954_73302263_73302386_73307075_73307182_73317826
transcript_105292.known	chr4	+	2426	15	FSM	ENSG00000081051.8	ENST00000395792.7	2426	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.087297891605	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTCATCAATTAAATTT	-2	True	NA	NA	False	AATATA	-6	NA	73436220	73456174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73436348_73437159_73437212_73438173_73438307_73440601_73440814_73442295_73442429_73443346_73443445_73444992_73445123_73447461_73447677_73449334_73449468_73450035_73450134_73450614_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_105293.known	chr4	+	728	5	FSM	ENSG00000081051.8	ENST00000508838.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.2346843032422	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTTATCACAGAAATAA	2895	False	NA	-28	True	GATAAA	-16	NA	73450548	73455741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_105296.known	chr4	+	476	4	FSM	ENSG00000081051.8	ENST00000506820.1	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30.0998338865848	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCCAAGTTTGCTTA	2744	False	NA	8	True	AATAAA	-16	NA	73453489	73455777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73453631_73453764_73453898_73455235_73455291_73455630
transcript_105298.nnic	chr4	+	502	4	NNC	ENSG00000081051.8	novel	476	4	NA	NA	-126	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	38.0292285252044	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCCAAGTTTGCTTA	2618	False	NA	8	True	AATAAA	-16	NA	73453363	73455777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_73453531_73453764_73453898_73455235_73455291_73455630
transcript_105299.known	chr4	-	5882	11	FSM	ENSG00000169435.14	ENST00000307439.10	5882	11	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	4.34050688284214	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTCCCTGATATAG	-16	True	NA	NA	False	ATTAAA	-16	NA	73620436	73571549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73582188_73582291_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_105302.known	chr4	-	2735	10	FSM	ENSG00000169435.14	ENST00000395777.6	2735	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	6.09188896083235	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTACCCTAAGGCTG	8	True	NA	NA	False	AATAAA	-9	NA	73620412	73574570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_105304.known	chr4	+	1537	4	FSM	ENSG00000124875.10	ENST00000226317.10	1537	4	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_2	4.18993502999218	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTGTTTCTCCTTCT	1	True	NA	14	True	AATAAA	-15	NA	73836677	73838760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73836860_73836963_73837097_73837202_73837287_73837622
transcript_105306.known	chr4	+	743	3	FSM	ENSG00000109272.4	ENST00000226524.4	743	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGACAGCTTTTTTTTTTT	-18	True	NA	NA	False	AATAAA	-23	NA	73853295	73854483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73853463_73853782_73853910_73854034
transcript_105308.known	chr4	+	1174	4	FSM	ENSG00000163739.5	ENST00000395761.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAATTTTTTAATTGT	0	True	NA	NA	False	NA	NA	NA	73869392	73871308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73869571_73869668_73869793_73869905_73869990_73870520
transcript_105310.nnic	chr4	-	673	3	FSM	ENSG00000163737.5	ENST00000687529.1	715	3	39	3	39	-3	multi-exon	FALSE	canonical	1	1	junction_2	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTAGTATAGTCAAAATA	1	True	NA	-14	True	AATAAA	-14	NA	73981988	73981076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73981292_73981416_73981544_73981657
transcript_105311.known	chr4	-	773	3	FSM	ENSG00000163737.5	ENST00000296029.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGTAAATAAATAAGACT	-3	True	NA	NA	False	AATAAA	-30	NA	73982027	73980810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73981292_73981416_73981544_73981862
transcript_105312.known	chr4	-	1307	3	FSM	ENSG00000163736.4	ENST00000296028.4	1307	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTCATCTATTATTA	0	True	NA	NA	False	AATAAA	-14	NA	73988190	73986438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73987375_73987516_73987653_73987955
transcript_105314.known	chr4	+	1822	3	FSM	ENSG00000287037.1	ENST00000669992.1	1822	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTGAGACAATAAATAGC	NA	False	NA	NA	False	NA	NA	NA	73997932	74007682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73998799_73999194_73999363_74006894
transcript_105317.nic	chr4	+	1989	2	NIC	ENSG00000287037.1	novel	1822	3	NA	NA	229	0	intron_retention	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTGAGACAATAAATAGC	NA	False	NA	NA	False	NA	NA	NA	73998161	74007682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_73999363_74006894
transcript_105319.known	chr4	-	2436	4	FSM	ENSG00000163735.7	ENST00000296027.5	2436	4	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	13.1993265821489	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATTGTTTCTCCTTCC	1	True	NA	-3	True	AATAAA	-24	NA	73998677	73995641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73997656_73998011_73998096_73998205_73998339_73998472
transcript_105320.known	chr4	-	1075	4	FSM	ENSG00000163734.4	ENST00000296026.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.24933858267454	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGTGGTTTTTCAAA	-1	True	NA	NA	False	AATAAA	-18	NA	74038689	74036588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_74037278_74038092_74038177_74038289_74038414_74038511
transcript_105321.known	chr4	-	630	3	FSM	ENSG00000163734.4	ENST00000502974.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTATTTCTTACGAGG	-1	True	NA	NA	False	AAAAAG	-44	NA	74038689	74037131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_74037278_74038092_74038177_74038289
transcript_105322.known	chr4	-	577	3	FSM	ENSG00000081041.9	ENST00000296031.4	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGCAGAGGCCACCT	-1	True	NA	NA	False	NA	NA	NA	74099195	74097675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_74097772_74098600_74098685_74098798
transcript_105323.known	chr4	+	2389	9	FSM	ENSG00000163738.19	ENST00000359107.10	2389	9	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	47.7688117394603	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	-19	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74160054_74160089_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_105328.known	chr4	+	2355	8	FSM	ENSG00000163738.19	ENST00000325278.7	2355	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	10.1337987719818	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	-19	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_105334.known	chr4	+	468	3	FSM	ENSG00000163738.19	ENST00000484725.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	78	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTCAGGGCGGGATAT	38	False	NA	NA	False	NA	NA	NA	74158174	74162106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74160054_74160089_74161779
transcript_105337.known	chr4	+	2363	2	FSM	ENSG00000163738.19	ENST00000461101.1	2363	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACCATCTTGCTGCTTT	-19	True	NA	27	True	ATTAAA	-19	NA	74158117	74162253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74160054
transcript_105341.known	chr4	-	1863	1	FSM	ENSG00000269559.2	ENST00000600169.2	1863	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTTTATTCATATTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	74158373	74156510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_74156500_74158400
transcript_105349.nnic	chr4	-	1051	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42778	-22	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	9.8770215933527	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTTGTTTCTCACA	NA	False	NA	-20	True	AATAAA	-13	NA	75127495	75081946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127065
transcript_10535.known	chr1	+	1700	8	FSM	ENSG00000160753.16	ENST00000490373.5	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	91.0478681008748	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCACCTGTAAGGTGAAA	14	True	NA	20	True	AATAAA	-20	NA	155324521	155330730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_105350.nnic	chr4	-	770	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42563	-22	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	10.4029910228848	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTTGTTTCTCACA	NA	False	NA	-20	True	AATAAA	-13	NA	75127280	75081946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127131
transcript_105352.nnic	chr4	-	698	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42535	-17	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCTCACAAATTA	NA	False	NA	-15	True	AATAAA	-18	NA	75127252	75081941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75121924_75122020_75127065
transcript_105353.nnic	chr4	-	600	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42503	-17	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCTCACAAATTA	NA	False	NA	-15	True	AATAAA	-18	NA	75127220	75081941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75121924_75122020_75127131
transcript_105354.nnic	chr4	-	945	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42767	-22	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_2	7.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTTGTTTCTCACA	NA	False	NA	-20	True	AATAAA	-13	NA	75127484	75081946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75084588_75084704_75127065
transcript_105355.nnic	chr4	-	867	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42755	-22	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	10.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTTGTTTCTCACA	NA	False	NA	-20	True	AATAAA	-13	NA	75127472	75081946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75084588_75084704_75127131
transcript_105357.known	chr4	-	571	1	FSM	ENSG00000260265.1	ENST00000567197.1	571	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACTGGCATCTGTATA	1027	False	NA	2	True	AATAAA	-35	NA	75082495	75081924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75081900_75082500
transcript_105365.nnic	chr4	-	531	2	NNC	ENSG00000251185.1	novel	469	2	NA	NA	84572	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTCCTATGTTGTCTA	NA	False	NA	NA	False	ATTAAA	-20	NA	75276610	75269065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75269496_75276509
transcript_10537.known	chr1	+	1749	8	FSM	ENSG00000160753.16	ENST00000471876.5	1749	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	127.110429251458	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	31	True	NA	24	True	AATAAA	-15	NA	155324538	155331114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_105371.known	chr4	-	728	9	FSM	ENSG00000163743.14	ENST00000513909.5	728	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	275.134398976209	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTGTGAATCCTATAA	153	False	NA	NA	False	NA	NA	NA	75514256	75482603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514154
transcript_105372.known	chr4	-	1011	9	FSM	ENSG00000163743.14	ENST00000512706.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	209.175763414407	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCATATTACAAGTA	-21	True	NA	NA	False	NA	NA	NA	75514430	75482412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514240
transcript_105379.known	chr4	-	1735	8	FSM	ENSG00000163743.14	ENST00000380840.6	1735	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	225.25468578786	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATACCTCTTACTTCAG	18	True	NA	NA	False	NA	NA	NA	75514286	75481468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75514196
transcript_105382.known	chr4	+	3549	5	FSM	ENSG00000174796.12	ENST00000311638.7	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	17.5695048308141	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	0	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_105390.known	chr4	+	1161	5	FSM	ENSG00000174796.12	ENST00000514480.1	1161	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.0705439901187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTCATGTTACGTTC	47	False	NA	NA	False	NA	NA	NA	75514519	75527214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75514992_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_105391.known	chr4	+	655	4	FSM	ENSG00000174796.12	ENST00000503831.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	13.4742552876052	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACATATGTAGTTCACT	16	True	NA	NA	False	AATAGA	-16	NA	75514488	75522050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735
transcript_105392.known	chr4	+	3423	4	FSM	ENSG00000174796.12	ENST00000380837.7	3423	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	32.4995726467629	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	0	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75526959
transcript_105394.known	chr4	-	4408	9	FSM	ENSG00000163743.14	ENST00000324439.10	4408	9	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_6	19.6941457037364	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTACCCTTTGATCA	6	True	NA	1	True	AGTAAA	-24	NA	75514403	75479032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_105395.known	chr4	-	1304	9	FSM	ENSG00000163743.14	ENST00000505105.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	213.063920866486	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAGAAAGTTTTTT	-8	True	NA	-13	True	AATAAA	-14	NA	75514312	75482007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490664_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_105396.known	chr4	-	2443	7	FSM	ENSG00000163743.14	ENST00000514589.5	2443	7	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_4	22.3383079036887	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAGAAAGTTTTTT	-9	True	NA	-13	True	AATAAA	-14	NA	75514418	75482007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_105397.known	chr4	-	540	7	FSM	ENSG00000163743.14	ENST00000513083.5	540	7	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_4	10.8384603252594	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGGGATTTTAAAAAT	18	True	NA	NA	False	AAGAAA	-15	NA	75514286	75491606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_105398.known	chr4	-	759	8	FSM	ENSG00000163743.14	ENST00000513257.5	759	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	217.58995324946	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCCTACACAGTACTGGA	18	True	NA	NA	False	NA	NA	NA	75514286	75482537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_105399.known	chr4	-	4935	14	FSM	ENSG00000138769.11	ENST00000307465.9	4935	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	4.70427226197559	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTCTCAAGGGTCT	-18	True	NA	-1	True	AATAAA	-15	NA	75630528	75576495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75579179_75581809_75581899_75591818_75591926_75592145_75592270_75596246_75596341_75596934_75597237_75598076_75598213_75600280_75600370_75603816_75603957_75605521_75605635_75607182_75607362_75614254_75614450_75625820_75626018_75630041
transcript_105403.nic	chr4	-	1494	8	ISM	ENSG00000138769.11	ENST00000429927.6	3383	12	188	20114	0	0	5prime_fragment	FALSE	canonical	3	9	junction_1	2.24971653543195	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATTCCTTAGTTGAAGA	-18	True	NA	NA	False	AAAAAG	-6	NA	75630528	75598118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_75598213_75600280_75600370_75603816_75603957_75605521_75605635_75607182_75607362_75614254_75614450_75625820_75626018_75630041
transcript_105408.known	chr4	+	4135	26	FSM	ENSG00000138768.15	ENST00000264904.8	4135	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	413.006762172243	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	18	False	NA	18	True	AATAAA	-19	NA	75724597	75814286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75760593_75760606_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75795335_75795357_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_105411.known	chr4	+	4123	24	FSM	ENSG00000138768.15	ENST00000514213.7	4123	24	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_14	186.188452613417	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	-3	True	NA	18	True	AATAAA	-19	NA	75724576	75814286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_105419.nic	chr4	+	2209	17	ISM	ENSG00000138768.15	ENST00000514213.7	4123	24	-55	13161	-55	-5430	5prime_fragment	TRUE	canonical	3	741	junction_14	138.473372891686	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGGTGAAAAAAAC	NA	False	NA	23	True	GATAAA	-4	NA	75724521	75801125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078
transcript_105421.known	chr4	-	5398	13	FSM	ENSG00000138757.15	ENST00000677265.1	5398	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	1058.49850089119	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-39	True	NA	NA	False	NA	NA	NA	75724465	75641848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724055_75724177_75724275
transcript_105422.known	chr4	-	5385	13	FSM	ENSG00000138757.15	ENST00000678100.1	5385	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	1122.98830940289	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-59	True	NA	NA	False	NA	NA	NA	75724485	75641848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_105425.known	chr4	-	4217	12	FSM	ENSG00000138757.15	ENST00000395719.7	4217	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	1069.66224683965	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTCCCTAATTTAATC	9	True	NA	-16	True	AATAAA	-23	NA	75673114	75642781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
transcript_105426.known	chr4	-	4321	12	FSM	ENSG00000138757.15	ENST00000359707.9	4321	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	920.606914436933	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	-21	True	NA	-20	True	AATAAA	-19	NA	75673411	75642785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_105427.known	chr4	-	2330	12	FSM	ENSG00000138757.15	ENST00000677162.1	2330	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_11	1076.03830310638	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAACTTCAAATGCGATG	NA	False	NA	-16	True	AATAAA	-3	NA	75673620	75644742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673450
transcript_105428.known	chr4	-	5189	12	FSM	ENSG00000138757.15	ENST00000677583.1	5189	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	963.60151738025	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	49	True	NA	NA	False	NA	NA	NA	75724377	75641848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
transcript_105429.known	chr4	-	5390	12	FSM	ENSG00000138757.15	ENST00000676666.1	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_11	913.854003928345	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75724589	75641848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_105431.known	chr4	-	5327	12	FSM	ENSG00000138757.15	ENST00000678062.1	5327	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	1038.46358220703	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	NA	False	NA	NA	False	NA	NA	NA	75724548	75641848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_105437.known	chr4	-	5142	11	FSM	ENSG00000138757.15	ENST00000678552.1	5142	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	739.794998631378	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	185	False	NA	NA	False	NA	NA	NA	75673205	75641848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
transcript_105438.known	chr4	-	2609	11	FSM	ENSG00000138757.15	ENST00000357854.7	2609	11	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_4	263.269063887119	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTAGCATATTATTTAT	-11	True	NA	-36	True	AGTAAA	-2	NA	75673401	75644388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_105439.known	chr4	-	2592	11	FSM	ENSG00000138757.15	ENST00000677125.1	2592	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_10	751.923460200571	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATCTTGTTCTTCAGT	NA	False	NA	-23	True	AGTAAA	-15	NA	75673614	75644375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673450
transcript_105440.known	chr4	-	5155	11	FSM	ENSG00000138757.15	ENST00000678122.1	5155	11	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_10	677.631787920254	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-49	True	NA	NA	False	NA	NA	NA	75724475	75641848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_105441.known	chr4	-	5110	11	FSM	ENSG00000138757.15	ENST00000677876.1	5110	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	787.603866166235	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	423	False	NA	NA	False	NA	NA	NA	75672967	75641848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75672812
transcript_105452.nic	chr4	-	749	6	ISM	ENSG00000138757.15	ENST00000357854.7	2609	11	-61	11454	4	0	5prime_fragment	FALSE	canonical	3	2255	junction_5	225.9424705539	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAGACAACCATCTC	NA	False	NA	10	True	NA	NA	NA	75673462	75655842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_105455.known	chr4	-	546	5	FSM	ENSG00000138757.15	ENST00000502654.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	1092.62356280651	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAGACAACCATCTC	12	True	NA	10	True	NA	NA	NA	75673378	75655842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75673207
transcript_105476.known	chr4	-	678	2	FSM	ENSG00000138757.15	ENST00000507701.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCGACCTTTATTTCAT	0	True	NA	NA	False	NA	NA	NA	75673350	75661514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75662050_75673207
transcript_105478.nnic	chr4	-	698	2	NIC	ENSG00000138757.15	novel	276	2	NA	NA	6	153	intron_retention	FALSE	canonical	3	10	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATTTCAGGTTA	NA	False	NA	NA	False	NA	NA	NA	75673608	75662228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_75662526_75673207
transcript_105479.known	chr4	-	246	2	FSM	ENSG00000138757.15	ENST00000678389.1	246	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCGTATGCCTGT	49	True	NA	NA	False	AATACA	-12	NA	75724377	75662381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75662526_75724275
transcript_105480.known	chr4	-	2441	2	FSM	ENSG00000138757.15	ENST00000677094.1	2441	2	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACATATAATCAAAATT	-1	True	NA	NA	False	CATAAA	-37	NA	75724427	75721887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75724177_75724275
transcript_105485.known	chr4	-	3003	22	FSM	ENSG00000198301.12	ENST00000356260.10	3003	22	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_13	40.2941564946959	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACCTTTGTATGTGGAGT	-4	True	NA	-11	True	AATAAA	-20	NA	75990945	75949914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_105488.known	chr4	-	3080	22	FSM	ENSG00000198301.12	ENST00000395710.5	3080	22	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_20	93.5116857625273	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	3	True	NA	-2	True	AATAAA	-29	NA	75990938	75949905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_105494.known	chr4	-	2513	21	FSM	ENSG00000198301.12	ENST00000395711.8	2513	21	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_18	102.08813594145	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAACAAAACAGGACAATG	4	True	NA	NA	False	NA	NA	NA	75990937	75950285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75981371_75981471_75981932_75982038_75990751
transcript_105516.nic	chr4	-	966	9	ISM	ENSG00000198301.12	ENST00000356260.10	3003	22	-77	21470	-60	0	5prime_fragment	FALSE	canonical	3	426	junction_8	21.8789282187222	1733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	NA	False	NA	-28	True	AAGAAA	-21	NA	75991022	75971384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_105521.nic	chr4	-	988	9	ISM	ENSG00000198301.12	ENST00000395710.5	3080	22	-31	21479	-7	0	5prime_fragment	FALSE	canonical	3	41	junction_7	142.147755434266	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTGGAAAAGGCAATGAAAG	NA	False	NA	-28	True	AAGAAA	-21	NA	75990969	75971384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_105545.known	chr4	-	554	2	FSM	ENSG00000138744.16	ENST00000507940.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAATGTCTTACGCAAGC	774	False	NA	NA	False	NA	NA	NA	75940224	75936163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75936236_75939742
transcript_105546.nic	chr4	+	1567	10	NIC	ENSG00000156219.17	novel	1528	11	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.36986977843755	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCTCAATACTGTTAGT	NA	False	NA	NA	False	AATAAA	-31	NA	76074648	76112802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_76074820_76075880_76075959_76081823_76082536_76097643_76097677_76098954_76098988_76100290_76100321_76100794_76100825_76100989_76101020_76103936_76103970_76112385
transcript_105573.nic	chr4	-	1370	5	NIC	ENSG00000138750.15	novel	2249	12	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	299.621844997991	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	NA	False	NA	-5	True	AATAAA	-24	NA	76148507	76114663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76148307
transcript_105575.known	chr4	-	2249	12	FSM	ENSG00000138750.15	ENST00000264883.8	2249	12	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_8	48.084120503843	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	-2	True	NA	-5	True	AATAAA	-24	NA	76148397	76114663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
transcript_105576.known	chr4	-	1938	10	FSM	ENSG00000138750.15	ENST00000507257.5	1938	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	266.237988774455	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGCTTTATTT	13	False	NA	0	True	AATAAA	-29	NA	76148416	76114658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
transcript_105577.known	chr4	-	4694	12	FSM	ENSG00000138760.11	ENST00000264896.8	4694	12	0	0	0	0	multi-exon	TRUE	canonical	3	223	junction_8	25.1264570318859	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTAGAAGTCATATGT	0	True	NA	-21	True	AATAAA	-19	NA	76213824	76158736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76213426
transcript_105578.known	chr4	-	4507	12	FSM	ENSG00000138760.11	ENST00000638295.1	4507	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	83.2993208826106	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAACCACTTTATATA	-7	True	NA	-44	True	AATGAA	-12	NA	76234536	76158759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_76161752_76163224_76163384_76166249_76166302_76168402_76168477_76169866_76169986_76174143_76174314_76175790_76175911_76176436_76176529_76179516_76179706_76180953_76181102_76195706_76195865_76234302
transcript_10558.known	chr1	-	679	6	FSM	ENSG00000225855.7	ENST00000443642.1	679	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGCTAGAAAGAGTGGAA	8095	False	NA	NA	False	AAGAAA	-4	NA	155324168	155317945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155318006_155318264_155318397_155319802_155319933_155321624_155321696_155322242_155322438_155324077
transcript_105580.known	chr4	+	1533	8	FSM	ENSG00000189157.14	ENST00000424749.7	1533	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.04067843196171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTCTATTGCCTTTTTC	1	True	NA	NA	False	AATAAA	-23	NA	76251720	76283783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268769_76271567_76271769_76278068_76278225_76280263_76280342_76283380
transcript_105586.nic	chr4	+	857	4	ISM	ENSG00000272414.6	ENST00000515604.5	3029	7	-19	42209	-19	-41133	5prime_fragment	FALSE	canonical	3	12	junction_1	4.18993502999218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCGTAAAGGAATCATTT	-18	True	NA	NA	False	ATTAAA	-36	NA	76251701	76268911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659
transcript_105588.nic	chr4	+	501	3	ISM	ENSG00000189157.14	ENST00000510328.5	1002	4	12	9744	-9	0	5prime_fragment	FALSE	canonical	3	9	junction_1	6.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCGTAAAGGAATCATTT	-8	True	NA	NA	False	ATTAAA	-36	NA	76251711	76268911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_76251821_76263703_76263844_76268659
transcript_105589.known	chr4	+	1465	3	FSM	ENSG00000272414.6	ENST00000514365.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCAAGCTTGAGCCTTT	12	True	NA	NA	False	AAAACA	-16	NA	76251731	76310379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76251821_76263703_76263844_76309143
transcript_105591.known	chr4	+	2244	2	FSM	ENSG00000118804.9	ENST00000237642.7	2244	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTCTGAATTATTTG	-1	True	NA	11	True	AATAAA	-22	NA	76306732	76311130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76306990_76309143
transcript_105594.known	chr4	+	628	3	FSM	ENSG00000138771.16	ENST00000466541.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGCAGCCATGTACC	20	False	NA	5	True	AATAAA	-23	NA	76436145	76559576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76436221_76555608_76555764_76559178
transcript_105595.known	chr4	+	504	3	FSM	ENSG00000138771.16	ENST00000490690.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCCTAGGACTCGAACC	106	False	NA	NA	False	NA	NA	NA	76586139	76645354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76586470_76628865_76628984_76645298
transcript_105598.nnic	chr4	-	457	3	Antisense	novelGene_ENSG00000138771.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTTGTCTCTTGACTTA	-5	True	NA	NA	False	AATAAA	-19	NA	76435502	76425966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_76426204_76434681_76434753_76435353
transcript_1056.nnic	chr1	-	1257	3	NNC	ENSG00000231510.1	novel	449	4	NA	NA	-29199	-1254	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	2.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTATCTCATGGTTTTG	NA	False	NA	-5	True	AATAAA	-21	NA	5120098	5087712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_5088374_5119373_5119471_5119599
transcript_105600.known	chr4	+	475	2	FSM	ENSG00000138771.16	ENST00000484236.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGGTTTGGGACTAG	47	True	NA	NA	False	GATAAA	-4	NA	76586312	76587265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76586470_76586947
transcript_105603.known	chr4	+	5545	10	FSM	ENSG00000138758.12	ENST00000264893.11	5545	10	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	45.9172632212373	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGCCCTTTTTTGTG	-1	True	NA	32	True	CATAAA	-33	NA	76949751	77038615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782_77030971_77034496
transcript_105610.known	chr4	+	2615	9	FSM	ENSG00000138758.12	ENST00000502584.5	2615	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	46.9813792900975	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGAGAGAGTTTTAAA	-2	True	NA	NA	False	AATAAA	-19	NA	76949750	77032158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782
transcript_105619.known	chr4	+	5471	8	FSM	ENSG00000138764.15	ENST00000316355.10	5471	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.3371342165866	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGGTTATATGCTTCC	-15	True	NA	13	True	AATAAA	-20	NA	77157206	77170060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_77157507_77158532_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273_77164480_77165800
transcript_105621.known	chr4	-	4024	12	FSM	ENSG00000138767.14	ENST00000515506.6	4024	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	7.45676241978541	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTAAGTTTATTTTGTG	2837	False	NA	-4	True	AATAAA	-23	NA	77819063	77718020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_77720644_77726305_77726370_77728853_77729082_77731386_77731539_77742140_77742296_77744717_77744876_77748315_77748385_77756861_77756952_77773080_77773167_77774529_77774717_77776270_77776393_77818973
transcript_105631.known	chr4	+	1175	9	FSM	ENSG00000169288.18	ENST00000315567.13	1175	9	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_5	37.2573398808879	2662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	-3	True	NA	18	True	AATAAA	-19	NA	77862829	77952785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_77862880_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_105632.known	chr4	+	580	4	FSM	ENSG00000169288.18	ENST00000511521.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	198.488174850684	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGCTGTATTTACAGA	-4	True	NA	NA	False	NA	NA	NA	77862867	77885318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_77863014_77871743_77871856_77883241_77883501_77885255
transcript_105636.known	chr4	+	2871	19	FSM	ENSG00000138759.20	ENST00000502446.6	2871	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	17.9698822107065	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAACCCAATTGCCTTTT	165	False	NA	NA	False	ATTAAA	-24	NA	78057569	78319653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78319359
transcript_105637.nnic	chr4	+	1009	5	NNC	ENSG00000138759.20	novel	2297	4	NA	NA	22	23018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.1693138801664	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGTTGACTGGATAAATC	6	True	NA	NA	False	AATAAA	-42	NA	78057344	78095125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_78058086_78065984_78066017_78089774_78089859_78093017_78093046_78095001
transcript_105643.nic	chr4	+	974	4	ISM	ENSG00000138759.20	ENST00000683711.1	1905	12	-367	37994	0	-37994	5prime_fragment	FALSE	canonical	3	54	junction_3	6.59966329107444	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATGAAAAGAAAATCCATG	-16	True	NA	NA	False	NA	NA	NA	78057322	78245303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232
transcript_105644.nnic	chr4	+	2440	3	NIC	ENSG00000138759.20	novel	2297	4	NA	NA	47	46	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGGAGTGTTATCCAT	31	False	NA	NA	False	ATTAAA	-20	NA	78057369	78072153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_78058086_78065984_78066017_78070461
transcript_105645.nnic	chr4	+	1603	3	NNC	ENSG00000138759.20	novel	2297	4	NA	NA	32	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	35	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCATGGGAGTGTTATC	16	True	NA	NA	False	ATTAAA	-17	NA	78057354	78072150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_78058086_78065984_78066017_78071310
transcript_105646.nic	chr4	+	2001	3	ISM	ENSG00000138759.20	ENST00000683711.1	1905	12	-721	44936	-354	-44936	5prime_fragment	FALSE	canonical	3	60	junction_2	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCTTTAAATTTGAACTT	-2	True	NA	NA	False	AAAAAG	-3	NA	78056968	78238361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_78058086_78065984_78066017_78237509
transcript_105654.known	chr4	+	1432	13	FSM	ENSG00000138772.13	ENST00000264908.11	1432	13	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_8	24.35658136019	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTTTGTTTGCTTT	-6	True	NA	26	True	AATAAA	-21	NA	78551769	78610447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_78551860_78554435_78554489_78573179_78573268_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_105663.known	chr4	+	1335	12	FSM	ENSG00000138772.13	ENST00000512884.5	1335	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.084314645027	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATAATAAAAATTGTTG	-29	True	NA	-6	True	ATTAAA	-8	NA	78551746	78610415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_78551860_78554435_78554489_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_105670.nnic	chr4	+	741	4	NNC	ENSG00000138772.13	novel	571	5	NA	NA	-151	-7102	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	135.775140909111	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTTTTCAGTTGGTT	NA	False	NA	7	True	AATAAA	-18	NA	78551595	78575189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_78551860_78554435_78554489_78573179_78573268_78574853
transcript_105672.known	chr4	-	9811	6	FSM	ENSG00000163291.14	ENST00000512733.5	9811	6	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_5	45.5306490179967	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTAGTGAATTTTGTC	-39	True	NA	NA	False	AATACA	-18	NA	78939438	78911877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78935120_78935284_78939039
transcript_10568.known	chr1	+	1178	10	FSM	ENSG00000160752.15	ENST00000467076.5	1178	10	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	436.07086863162	6407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCGTGTAACCTTCT	-6	True	NA	-5	True	NA	NA	NA	155308888	155320647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_105682.known	chr4	+	904	3	FSM	ENSG00000250334.7	ENST00000664228.1	904	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATCCTATTAGTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	79491801	79493623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_79492121_79492661_79492775_79493151
transcript_105686.nnic	chr4	-	981	3	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGAAGCCTGTGTCTAG	NA	False	NA	-6	True	ATTAAA	-16	NA	79559511	79540714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_79541160_79553911_79554048_79559111
transcript_105689.nnic	chr4	-	1499	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTTGTTTACTCATTT	NA	False	NA	NA	False	CATAAA	-28	NA	79559365	79539914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_79541160_79559111
transcript_10569.known	chr1	+	1198	10	FSM	ENSG00000160752.15	ENST00000612683.1	1198	10	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	649.315365938959	2236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTCAATAAATAATCGT	75	False	NA	-15	True	NA	NA	NA	155308969	155320637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_105691.nnic	chr4	-	699	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGAAGCCTGTGTCTAG	NA	False	NA	-6	True	ATTAAA	-16	NA	79559365	79540714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_79541160_79559111
transcript_105693.known	chr4	+	2091	2	FSM	ENSG00000251321.1	ENST00000504263.1	2091	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGGATTTTGTCAAAT	0	True	NA	NA	False	ATTAAA	-17	NA	79827470	79863247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_79827604_79861289
transcript_105695.nnic	chr4	+	286	2	NIC	ENSG00000251321.1	novel	373	3	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTGGTCTATGGTATT	0	True	NA	NA	False	AATATA	-15	NA	79827470	79877767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_79827604_79877614
transcript_105696.known	chr4	-	932	2	FSM	ENSG00000163297.18	ENST00000482406.1	932	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTCGAAGACACCT	NA	False	NA	NA	False	NA	NA	NA	79964890	79906761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_79907468_79964664
transcript_105697.known	chr4	-	3656	18	FSM	ENSG00000163297.18	ENST00000679571.1	3656	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.7399740042036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAATTTTACCTATG	6531	False	80073151	-22	True	NA	NA	NA	80073123	79905590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_79907468_79907576_79907665_79977620_79977702_79978006_79978175_79983877_79983971_79984818_79984864_80008520_80008617_80018897_80018977_80031622_80031693_80033471_80033571_80035971_80036033_80054271_80054353_80055149_80055219_80055359_80055468_80055931_80056014_80069435_80069508_80071582_80071655_80072708
transcript_105699.known	chr4	-	2941	14	FSM	ENSG00000138670.19	ENST00000264400.7	2941	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	11.9153821323928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGCGTCTTTCTTTTC	2	True	NA	0	True	AATATA	-22	NA	81471907	81426392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448285_81456650_81456789_81457498_81457622_81459331_81459515_81471769
transcript_10570.known	chr1	+	1256	10	FSM	ENSG00000160752.15	ENST00000447866.5	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	481.97359181793	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGATTGCAAGGGCGG	-3	True	NA	-43	True	GGGGCT	-32	NA	155308793	155320609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_105700.known	chr4	-	498	5	FSM	ENSG00000138670.19	ENST00000512343.5	498	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.5866302262565	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCCTCTGATTGAGAAG	459	False	NA	NA	False	NA	NA	NA	82044244	81602870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_81602923_81635797_81635898_81824517_81824572_81915310_81915359_82044000
transcript_105701.known	chr4	-	539	6	FSM	ENSG00000138670.19	ENST00000510780.5	539	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.1113797278116	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAGCCCTCTGATTGAG	459	False	NA	NA	False	NA	NA	NA	82044244	81602873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_81602923_81635797_81635898_81824517_81824572_81894580_81894625_81915310_81915359_82044000
transcript_10571.known	chr1	+	938	8	FSM	ENSG00000160752.15	ENST00000468479.5	938	8	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	482.479861057983	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGGCAGGAGGCAGT	-5	True	NA	NA	False	NA	NA	NA	155308754	155319688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610
transcript_10572.known	chr1	+	808	5	FSM	ENSG00000160752.15	ENST00000495308.5	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	612.998572592139	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTAAGTTTTGGGGCTT	-2	True	NA	9	True	GATAAA	-21	NA	155308892	155318518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168
transcript_10573.known	chr1	+	2017	2	FSM	ENSG00000160752.15	ENST00000487002.1	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	2278	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	19	True	NA	NA	False	NA	NA	NA	155308913	155312979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155310206_155312254
transcript_10574.known	chr1	+	680	4	FSM	ENSG00000160752.15	ENST00000490140.1	680	4	0	0	0	0	multi-exon	FALSE	canonical	3	2260	junction_3	55.934485486743	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	3920	False	NA	13	True	AATAAA	-16	NA	155318718	155320665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155318929_155319610_155319689_155319793_155319929_155320408
transcript_10575.known	chr1	+	2163	8	FSM	ENSG00000160753.16	ENST00000292254.8	2163	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	39.3259534181296	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	20	False	NA	24	True	AATAAA	-15	NA	155324576	155331114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_105755.known	chr4	+	619	2	FSM	ENSG00000272677.2	ENST00000609575.2	736	2	117	0	88	0	multi-exon	FALSE	canonical	3	18	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGACTTTGTTTTC	101	False	NA	9	True	ATTAAA	-19	NA	82374401	82384027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82374727_82383733
transcript_105758.known	chr4	+	612	1	FSM	ENSG00000272677.2	ENST00000609552.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTGTTCGGGTT	0	True	NA	19	True	TATAAA	-26	NA	82374300	82374912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82374300_82374900
transcript_105759.known	chr4	-	3068	9	FSM	ENSG00000138668.19	ENST00000313899.12	3068	9	0	0	0	0	multi-exon	FALSE	canonical	3	3276	junction_3	1531.48771114071	11421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTCCCTCTGTCGTT	-14	True	NA	-5	True	AATAAA	-18	NA	82373991	82352497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82371527_82371585_82373445
transcript_10576.known	chr1	+	630	4	FSM	ENSG00000160752.15	ENST00000471117.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	1018.18367694636	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGGAAGAAAGGGTG	-32	True	NA	-36	True	AAGAAA	-17	NA	155308862	155318473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168
transcript_105760.known	chr4	-	1667	8	FSM	ENSG00000138668.19	ENST00000352301.8	1667	8	0	0	0	0	multi-exon	FALSE	canonical	3	1908	junction_7	2114.08190137333	6501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-6	True	NA	30	True	AATAAA	-12	NA	82373983	82353833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82354155_82355303_82355402_82356536_82356684_82356795_82356896_82357312_82357445_82358658_82358821_82359470_82359640_82373445
transcript_105761.known	chr4	-	1089	7	FSM	ENSG00000138668.19	ENST00000514671.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	3074.34336710929	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-11	True	NA	30	True	AATAAA	-12	NA	82359639	82353833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82354155_82354894_82355002_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470
transcript_105762.known	chr4	-	583	4	FSM	ENSG00000138668.19	ENST00000509107.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2352.12135930289	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGCTTTGTGCTATT	-8	True	NA	-47	True	NA	NA	NA	82373985	82359515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82359640_82371527_82371585_82373445_82373487_82373624
transcript_105764.known	chr4	-	1433	10	FSM	ENSG00000152795.18	ENST00000630114.2	1433	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	1194.30684478746	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCTTTTCTGCGTCAGG	31	True	NA	27	True	AATAAA	-14	NA	82430408	82424629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_105771.known	chr4	-	1318	9	FSM	ENSG00000152795.18	ENST00000630827.1	1318	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	889.931317574564	4641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTCTGCGTCAG	322	False	NA	26	True	AATAAA	-13	NA	82430399	82424630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_10578.nic	chr1	-	2419	4	NIC	ENSG00000116539.14	novel	5489	6	NA	NA	-9	-20934	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	5.24933858267454	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAACCTCGGTGGAC	NA	False	NA	NA	False	ATTAAA	-11	NA	155562816	155480730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_155482450_155521099_155521619_155562152_155562296_155562778
transcript_105784.known	chr4	-	2404	7	FSM	ENSG00000152795.18	ENST00000507721.5	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	2322	junction_4	218.13483343005	1241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGTCAGGTACTA	1324	False	NA	-23	True	AATAAA	-19	NA	82429397	82424624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_105785.known	chr4	-	1291	8	FSM	ENSG00000152795.18	ENST00000602300.5	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	2074	junction_1	291.866128104468	21051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	-4	True	NA	-27	True	AATAAA	-15	NA	82429441	82424628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_105786.nnic	chr4	+	1769	6	NNC	ENSG00000145293.17	novel	2083	6	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	280.811253335759	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	203	False	NA	15	True	AATAAA	-16	NA	82430558	82461087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_82430659_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_105787.known	chr4	+	2083	6	FSM	ENSG00000145293.17	ENST00000273920.8	2083	6	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	93.3565209291777	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTATCATGTGTGTGTT	-9	True	NA	22	True	AAAACA	-24	NA	82430589	82461177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82430914_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_105788.known	chr4	+	1874	6	FSM	ENSG00000145293.17	ENST00000509635.5	1874	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	218.934328052957	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGTGATTAATAAAAGC	4	True	NA	-17	True	NA	NA	NA	82430647	82461055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82430885_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_10579.known	chr1	-	11530	29	FSM	ENSG00000116539.14	ENST00000679097.1	11530	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	3.79110128849017	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAAAACTTTTCCTAAC	NA	False	NA	-29	True	ATTAAA	-1	NA	155563092	155335286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155337752_155338088_155338391_155339327_155339369_155341935_155342103_155343313_155343487_155343603_155343743_155344182_155344274_155346382_155346470_155347655_155347905_155349326_155349460_155349541_155349597_155352705_155352859_155354472_155354631_155357315_155357411_155357584_155357750_155360300_155360410_155370503_155370651_155370776_155370984_155378280_155378390_155378502_155378549_155380042_155380117_155395458_155395554_155415743_155415924_155438326_155439069_155459796_155459899_155477885_155482450_155521099_155521619_155562152_155562296_155563072
transcript_105792.known	chr4	+	1689	5	FSM	ENSG00000145293.17	ENST00000505846.5	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	312.805450719772	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	18	False	NA	15	True	AATAAA	-16	NA	82430661	82461087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82430885_82447919_82448022_82454721_82454855_82456914_82457039_82459980
transcript_105794.known	chr4	-	3178	8	FSM	ENSG00000249242.8	ENST00000449862.7	3178	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	6.1145527311522	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTCTTTGTCTCTT	-12	True	NA	-6	True	AATAAA	-17	NA	82561988	82483175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
transcript_105795.known	chr4	-	3296	8	FSM	ENSG00000249242.8	ENST00000515780.6	3296	8	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_7	19.4558631842665	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCTCTTACACCA	8285	False	NA	0	True	AATAAA	-23	NA	82562357	82483169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82562162
transcript_105804.known	chr4	-	566	7	FSM	ENSG00000249242.8	ENST00000508701.5	566	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.2400303410539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCACTCTCTGTGTGGTC	21	True	NA	NA	False	AATGAA	-41	NA	82561955	82490084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82490239_82496078_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
transcript_105812.known	chr4	-	848	4	FSM	ENSG00000231782.7	ENST00000515811.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATATATCTTATTTGTTC	9783	False	NA	NA	False	AATAAA	-15	NA	82621437	82613112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82613385_82613871_82614095_82614892_82615020_82621211
transcript_105814.known	chr4	-	6121	13	FSM	ENSG00000189308.11	ENST00000340417.8	6121	13	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_12	18.683028543455	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTGACAGCATTTAAGA	-27	True	NA	NA	False	ATTAAA	-22	NA	83010823	82924602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82928304_82930942_82931146_82935980_82936119_82936278_82936382_82937226_82937299_82938412_82938505_82939538_82939737_82939888_82939963_82946257_82946475_82970326_82970470_82978882_82979007_82984160_82984877_83010483
transcript_105816.known	chr4	-	4255	27	FSM	ENSG00000138674.17	ENST00000448323.5	4255	27	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_26	191.949358459511	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	9677	False	NA	-36	True	ATTAAA	-13	NA	82891266	82818661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_105817.known	chr4	-	3801	27	FSM	ENSG00000138674.17	ENST00000508502.5	3801	27	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_5	192.148969113448	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAGACATGGACTAGTC	-22	True	NA	NA	False	AAGAAA	-18	NA	82891203	82819010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_10582.nic	chr1	-	2318	3	ISM	ENSG00000116539.14	ENST00000679133.1	11431	28	-17	145430	-17	-20934	5prime_fragment	FALSE	canonical	3	6	junction_2	3	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAAAACCTCGGTGGAC	NA	False	NA	NA	False	ATTAAA	-11	NA	155562858	155480730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_155482450_155521099_155521619_155562778
transcript_105821.known	chr4	-	3861	26	FSM	ENSG00000138674.17	ENST00000509142.5	3861	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	229.04250784516	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-33	True	NA	-36	True	ATTAAA	-13	NA	82891214	82818661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_105822.known	chr4	-	4012	25	FSM	ENSG00000138674.17	ENST00000348405.8	4012	25	0	0	0	0	multi-exon	TRUE	canonical	3	397	junction_13	108.973206441869	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	45	True	NA	-35	True	ATTAAA	-14	NA	82891136	82818660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_105823.known	chr4	-	3596	25	FSM	ENSG00000138674.17	ENST00000505984.5	3596	25	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_5	146.546914890382	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTCCAAAGAAACATG	33	True	NA	NA	False	NA	NA	NA	82891148	82819043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_105829.known	chr4	-	3909	26	FSM	ENSG00000138674.17	ENST00000311785.11	3909	26	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	211.983825798102	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-5	True	NA	-36	True	ATTAAA	-13	NA	82891259	82818661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_105830.known	chr4	-	1717	12	FSM	ENSG00000138674.17	ENST00000436790.6	1717	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_11	89.4203556244326	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGGTTGCCAGCG	-3	True	NA	NA	False	AATAAA	-14	NA	82891184	82863210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_10584.known	chr1	+	911	2	FSM	ENSG00000235919.5	ENST00000456633.2	1225	2	16	298	16	-298	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCTTTTCATTCAGT	6	True	NA	NA	False	AAGAAA	-1	NA	155562041	155563646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155562287_155562980
transcript_105845.known	chr4	+	3825	5	FSM	ENSG00000168152.13	ENST00000302236.10	3825	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	21.4767315949145	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGATGTTTGTTTATT	22	True	NA	11	True	ATTAAA	-18	NA	82900734	82919969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82900883_82904735_82904932_82906323_82906628_82907784_82907936_82916943
transcript_105849.known	chr4	-	2770	5	FSM	ENSG00000251022.6	ENST00000504520.6	2770	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	84.6149366246882	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGTGAGCAATTCAGTT	NA	False	NA	NA	False	ATTAAA	-17	NA	82900960	82893008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900333
transcript_10585.known	chr1	+	909	2	FSM	ENSG00000235919.5	ENST00000452809.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTAGGTTTCTGTGG	37	False	NA	10	True	AATAAA	-15	NA	155562072	155563944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155562287_155563249
transcript_105850.known	chr4	-	516	4	FSM	ENSG00000251022.6	ENST00000511271.5	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	159.11700796025	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAACAACACGAATTCT	-17	True	NA	NA	False	NA	NA	NA	82900566	82894794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82894848_82895691_82895775_82900076_82900224_82900333
transcript_105851.nnic	chr4	-	2076	4	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	75	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	181.382346317263	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	58	False	NA	-95	True	AATAAA	-23	NA	82900885	82893544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_82894848_82897988_82898063_82900076_82900224_82900333
transcript_105853.known	chr4	-	971	3	FSM	ENSG00000251022.6	ENST00000512932.5	971	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	209.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTTAAAGCACAAGAGGA	-10	True	NA	NA	False	AAAACA	-29	NA	82900559	82894249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82894848_82900076_82900224_82900333
transcript_105854.known	chr4	-	683	3	FSM	ENSG00000251022.6	ENST00000513581.5	683	3	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	72	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCATTTTATTTTATT	-20	True	NA	NA	False	NA	NA	NA	82900569	82897762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82898063_82900076_82900224_82900333
transcript_105858.known	chr4	-	4042	26	FSM	ENSG00000138674.17	ENST00000443462.6	4042	26	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_25	226.529277577977	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	3	True	NA	-36	True	ATTAAA	-13	NA	82891178	82818661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82891087
transcript_105859.known	chr4	-	564	5	FSM	ENSG00000138674.17	ENST00000511975.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	378.416106951065	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATAATTTTGCAACCCC	3	True	NA	NA	False	AATGAA	-22	NA	82891178	82875771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82875842_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_105860.known	chr4	-	637	2	FSM	ENSG00000251022.6	ENST00000503704.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGTATAGCACACAAAA	-20	True	NA	NA	False	AAAACA	-26	NA	82900569	82899822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82900224_82900333
transcript_105863.known	chr4	+	1702	11	FSM	ENSG00000138663.9	ENST00000503682.5	1702	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	226.856540571349	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTACTTTGTTTTTAGTT	15	True	NA	15	True	AATAAA	-23	NA	83035206	83075797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83065059_83065156_83066437_83066554_83068437_83068523_83075296
transcript_105864.known	chr4	+	1695	11	FSM	ENSG00000138663.9	ENST00000511653.1	1695	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	224.784897179504	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGTTATTCTAATAAAT	33	False	NA	-26	True	NA	NA	NA	83035224	83075756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83073205_83073354_83075296
transcript_105867.known	chr4	+	1651	10	FSM	ENSG00000138663.9	ENST00000264389.7	1651	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_9	62.7764994953437	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	-9	True	NA	36	True	AATAAA	-44	NA	83035182	83075818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
transcript_105872.known	chr4	+	2273	9	FSM	ENSG00000138663.9	ENST00000509093.5	2273	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	192.830074158571	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAGTAGTACTTTGT	NA	False	NA	7	True	AATAAA	-15	NA	83034446	83075789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83075296
transcript_105875.known	chr4	+	558	3	FSM	ENSG00000138663.9	ENST00000511891.5	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_2	18.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATTTTGTGAATCAAA	-21	True	NA	NA	False	AGTAAA	-1	NA	83035170	83049515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83035299_83045625_83045706_83049165
transcript_105877.known	chr4	-	786	5	FSM	ENSG00000145287.11	ENST00000411416.6	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.49106001094224	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCATGCTTCTTTGC	4914	False	NA	-1	True	TATAAA	-25	NA	83109843	83090687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83109727
transcript_105878.known	chr4	-	1374	5	FSM	ENSG00000145287.11	ENST00000311507.9	1374	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.33853912601566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACTACAGATAACTATTC	1	True	NA	NA	False	NA	NA	NA	83114729	83090047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83114665
transcript_105881.nnic	chr4	-	743	4	NIC	ENSG00000145287.11	novel	786	5	NA	NA	-104	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	6.53197264742181	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCATGCTTCTTTGC	4810	False	NA	-1	True	TATAAA	-25	NA	83109947	83090687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_83090972_83094677_83094792_83104895_83105021_83109727
transcript_105882.known	chr4	-	1639	7	FSM	ENSG00000173085.15	ENST00000311469.9	1639	7	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	9.56411115693571	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGGCCTTACTGTTCT	220	False	NA	-18	True	AATAAA	-13	NA	83284914	83263825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83264364_83267585_83267775_83269859_83269994_83272086_83272173_83273495_83273618_83278947_83279115_83284511
transcript_105883.known	chr4	-	4581	12	FSM	ENSG00000173083.16	ENST00000311412.10	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	4.84981042485423	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATGACTATTCTTTT	-7	True	NA	NA	False	AATAAA	-20	NA	83334848	83292460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555
transcript_105885.known	chr4	-	932	3	FSM	ENSG00000173083.16	ENST00000680713.1	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGAGGGCCCTGAGTCA	377	False	NA	NA	False	NA	NA	NA	83334801	83318929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83319470_83322218_83322365_83334555
transcript_105886.known	chr4	-	3315	17	FSM	ENSG00000163312.11	ENST00000510985.1	3315	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	9.85975880790195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATACATTTCAGTTAT	20	True	NA	NA	False	ATTAAA	-23	NA	83455823	83407372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83448782_83448962_83453230_83453946_83455396
transcript_105889.nic	chr4	-	2219	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	-89	44870	-57	1477	5prime_fragment	FALSE	canonical	3	48	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCATAATGTTTTAAGAAA	NA	False	NA	NA	False	AAGAAA	-21	NA	83455912	83452242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_83453946_83455396
transcript_105890.known	chr4	-	744	2	FSM	ENSG00000163312.11	ENST00000440639.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCTTACTGAATTACA	20	True	NA	NA	False	AAAACA	-21	NA	83455823	83453756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83453946_83455268
transcript_105891.nic	chr4	-	1272	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	-89	45817	-57	530	5prime_fragment	FALSE	canonical	3	48	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCATAATATTAGTGCAA	NA	False	NA	-9	True	AATAAA	-19	NA	83455912	83453189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_83453946_83455396
transcript_105892.known	chr4	-	574	2	FSM	ENSG00000163312.11	ENST00000515482.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACCAGAGTGGATATGAA	-12	True	NA	NA	False	NA	NA	NA	83455855	83453719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83453946_83455507
transcript_10591.known	chr1	+	2438	14	FSM	ENSG00000125459.17	ENST00000649846.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	64.6641757181036	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	0	True	NA	9	True	NA	NA	NA	155610217	155614933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613424_155613567_155613656_155613767_155614061
transcript_105910.known	chr4	+	1550	6	FSM	ENSG00000163319.11	ENST00000295491.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	1552	junction_3	174.493094419235	5209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTGTGAAGTAAATGC	-4	True	NA	NA	False	AATAAA	-21	NA	83456057	83462298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83459739_83459798_83460972_83461033_83461120
transcript_105911.known	chr4	+	666	5	FSM	ENSG00000163319.11	ENST00000507019.5	666	5	0	0	0	0	multi-exon	TRUE	canonical	3	326	junction_2	693.869359101553	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATCCCCAAATAGCT	15	False	NA	32	True	AATAAA	-26	NA	83455982	83461423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83456178_83456908_83456959_83459739_83459798_83460972_83461033_83461120
transcript_105912.known	chr4	+	2482	2	FSM	ENSG00000163319.11	ENST00000512375.1	2482	2	0	0	0	0	multi-exon	FALSE	canonical	3	2032	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AGTAAA	-9	NA	83455931	83459144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83456178_83456908
transcript_105913.known	chr4	+	350	4	FSM	ENSG00000163319.11	ENST00000507349.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	860.418631959015	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTATGATGCCAATA	-7	True	NA	34	True	AATAAA	-40	NA	83456054	83461237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83456178_83456908_83456959_83460972_83461033_83461120
transcript_105914.known	chr4	-	4210	9	FSM	ENSG00000163322.14	ENST00000321945.12	4210	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	19.4277507704829	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATTCAATGGTAAATC	0	True	NA	-9	True	ATTAAA	-18	NA	83485100	83459516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83484985
transcript_105915.known	chr4	-	2718	8	FSM	ENSG00000163322.14	ENST00000475656.6	2718	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	47.2604593757632	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTCAATATTTAAA	-3	True	NA	-17	True	AATAAA	-17	NA	83485103	83460944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83476642_83476680_83482153_83482245_83484985
transcript_105916.known	chr4	-	682	6	FSM	ENSG00000163322.14	ENST00000511801.1	682	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	48.0083326100793	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTTGGCCAGTCACT	-3	True	NA	NA	False	TATAAA	-12	NA	83485103	83470202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83483991_83484167_83484985
transcript_105917.known	chr4	-	1732	3	FSM	ENSG00000163322.14	ENST00000515303.2	1732	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	74.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGTCTATAATATATATAG	92	False	NA	NA	False	AATAAA	-17	NA	83485065	83478807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83480369_83482153_83482245_83484985
transcript_105918.known	chr4	+	2928	12	FSM	ENSG00000138678.11	ENST00000264409.5	2928	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	3.33278232360425	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGCATTATTCCCC	1	True	NA	6	True	AATAAA	-16	NA	83536107	83605875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83536764_83544535_83544603_83581561_83581833_83587254_83587330_83588209_83588300_83590198_83590293_83594844_83594961_83596857_83596914_83597429_83597516_83598050_83598180_83598643_83598724_83604667
transcript_105927.known	chr4	-	14559	68	FSM	ENSG00000163625.16	ENST00000295888.9	14559	68	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_54	18.1669321795458	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTAATTTTTTTTTCA	-18	True	NA	-16	True	ATTAAA	-17	NA	84966690	84669596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_84672992_84677198_84677397_84678167_84678280_84678918_84679243_84682373_84682471_84683942_84684126_84688085_84688266_84690505_84690665_84691630_84691786_84692884_84693033_84695969_84696183_84696731_84696824_84702352_84702507_84704337_84704445_84705393_84705512_84708908_84709029_84709292_84709348_84713158_84713240_84715297_84715384_84716895_84717017_84718421_84718571_84721408_84721573_84724425_84724595_84726860_84726912_84733381_84733610_84735042_84735121_84736169_84736328_84737183_84737367_84739009_84739120_84740186_84740417_84741760_84741922_84743699_84743800_84751482_84751717_84753696_84753877_84755265_84755401_84756925_84757162_84765809_84766028_84766251_84766373_84772834_84772930_84774819_84774982_84775064_84775139_84778502_84778656_84780107_84780299_84782962_84783075_84785978_84786140_84787481_84787714_84789725_84789908_84794518_84794738_84794878_84794980_84796520_84796753_84797995_84798109_84801649_84801865_84803289_84803468_84808333_84808418_84809886_84810345_84817391_84817586_84820084_84820187_84821083_84821552_84826814_84826982_84829003_84829191_84831412_84831606_84836928_84837091_84841153_84841264_84849901_84850026_84860411_84860623_84896910_84897011_84932269_84932364_84966208
transcript_105928.known	chr4	+	3278	5	FSM	ENSG00000180769.10	ENST00000652474.2	3278	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.58602010819715	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATACTTTCTCTACTG	NA	False	NA	-7	True	AATAAA	-3	NA	84965629	85008730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_84965859_84969724_84969877_85000690_85000766_85004229_85004328_85006006
transcript_105930.known	chr4	+	1620	4	FSM	ENSG00000180769.10	ENST00000650985.1	1620	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.62466929133727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATTTGACGGAAAATT	60	False	NA	NA	False	AATAAA	-5	NA	84965710	85007233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_84965859_84969724_84969877_85004229_85004328_85006011
transcript_105934.nnic	chr4	+	453	3	NNC	ENSG00000180769.10	novel	3270	4	NA	NA	-3	-16248	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTCTTAATAGCATTT	-5	True	NA	3	True	AATAAA	-19	NA	84965645	84970727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_84965859_84969724_84969877_84970639
transcript_105936.known	chr4	+	2740	8	FSM	ENSG00000138639.18	ENST00000395183.6	2740	8	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	20.7275819395612	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	-3	True	NA	14	True	ATTAAA	-13	NA	85778705	86001223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_85778966_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_105942.nnic	chr4	+	2724	8	NNC	ENSG00000138639.18	novel	725	5	NA	NA	-39253	0	at_least_one_novel_splicesite	FALSE	canonical	3	51	junction_1	8.82251294665401	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	NA	False	NA	14	True	ATTAAA	-13	NA	85884480	86001223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_85884725_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_105945.nnic	chr4	+	1055	6	NNC	ENSG00000138639.18	novel	725	5	NA	NA	-39253	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	24.8483399847958	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTGCATCATTTATGTG	NA	False	NA	9	True	AATAAA	-20	NA	85884480	85975766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_85884725_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85975493
transcript_105948.nic	chr4	+	1206	3	ISM	ENSG00000138639.18	ENST00000506421.5	857	4	-387	1346	-94	0	5prime_fragment	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAACAA	NA	False	NA	NA	False	AAAACA	-1	NA	85475055	85722386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_85475560_85570521_85570722_85721884
transcript_105949.known	chr4	+	631	2	FSM	ENSG00000138639.18	ENST00000509709.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAACAA	NA	False	NA	NA	False	AAAACA	-1	NA	85570592	85722386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_85570722_85721884
transcript_105950.known	chr4	+	1273	6	FSM	ENSG00000138639.18	ENST00000503995.5	1273	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.1666504065002	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGCTGAATAAATTAAAT	34	True	NA	NA	False	AAAAAG	-3	NA	85475237	85972367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_85475560_85570521_85570722_85721884_85721973_85923647_85923771_85942065_85942274_85972035
transcript_105952.known	chr4	-	5738	15	FSM	ENSG00000109339.24	ENST00000641051.1	5738	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_14	11.098124496821	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTTCATCTTCAAGAATC	NA	False	NA	-13	True	AATAAA	-12	NA	86594625	86013873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86453029_86453182_86593909
transcript_105953.known	chr4	-	8735	14	FSM	ENSG00000109339.24	ENST00000641462.2	8735	14	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_13	11.8281581594003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGCAAATATTTTTATT	1	True	NA	NA	False	AATAAA	-17	NA	86360053	86010404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86017371_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86359657
transcript_105954.known	chr4	-	2665	14	FSM	ENSG00000109339.24	ENST00000395157.9	2665	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	12.6818138437238	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAGAAAGAACATATGT	3	True	NA	-14	True	ATTAAA	-18	NA	86360051	86016477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86017376_86029196_86029275_86031367_86031432_86064265_86064391_86067772_86067956_86098523_86098596_86101051_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86359657
transcript_105956.known	chr4	-	1826	8	FSM	ENSG00000109339.24	ENST00000642098.1	1826	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	14.4603610195709	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTATATATTCCAAAAATC	-5	True	NA	NA	False	AATAAA	-2	NA	86360059	86100478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86101218_86101893_86102033_86103185_86103245_86107222_86107353_86159297_86159468_86194335_86194408_86354529_86354645_86359657
transcript_105972.known	chr4	+	480	3	FSM	ENSG00000172493.23	ENST00000511996.5	480	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	50	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTAATTCTTTTTCTTTT	26	False	NA	NA	False	AAAACA	-38	NA	86935073	86974068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_86935241_86948497_86948572_86973829
transcript_105977.known	chr4	+	1486	7	FSM	ENSG00000172493.23	ENST00000507468.5	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	27.6083723211315	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGTAAGTAAATTTGAA	5	True	NA	NA	False	NA	NA	NA	86935010	87091824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_86935241_86948497_86948572_87046165_87046287_87046694_87047595_87084122_87084165_87089983_87090071_87091792
transcript_105982.known	chr4	-	1610	5	FSM	ENSG00000163633.12	ENST00000462714.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.87367006223537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCATGATTTATATTC	11	False	NA	NA	False	AATAAA	-23	NA	86892410	86886796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86887894_86888120_86888276_86890047_86890139_86891455_86891594_86892281
transcript_10599.known	chr1	+	2422	14	FSM	ENSG00000125459.17	ENST00000245564.8	2422	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_13	20.7407211734042	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTTTATTCCACACA	0	True	NA	27	True	NA	NA	NA	155610217	155614951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614058
transcript_105990.known	chr4	-	448	4	FSM	ENSG00000163633.12	ENST00000504008.1	448	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.94422221866655	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGAAGCGTCTTTGTAA	8	False	NA	NA	False	NA	NA	NA	86892413	86887870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86887894_86888120_86888276_86891455_86891594_86892281
transcript_105997.known	chr4	-	898	4	FSM	ENSG00000284968.1	ENST00000506484.1	898	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGATATAGTCAAAGAA	1	True	NA	NA	False	AAAAAG	-9	NA	86936179	86925866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86926327_86932221_86932320_86933394_86933543_86935987
transcript_105998.nnic	chr4	-	737	4	NNC	ENSG00000284968.1	novel	2158	4	NA	NA	-368	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.86744175568088	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAAAAAAGATGATA	1294	False	NA	NA	False	NA	NA	NA	86934910	86925877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_86925987_86932263_86932320_86933394_86933543_86934486
transcript_105999.nnic	chr4	-	530	4	NNC	ENSG00000284968.1	novel	2158	4	NA	NA	-2	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.10960933531265	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAAAAAAGATGATA	0	True	NA	NA	False	NA	NA	NA	86936204	86925877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_86925987_86932263_86932320_86933394_86933543_86935987
transcript_106003.nic	chr4	-	1019	3	NIC	ENSG00000284968.1	novel	2158	4	NA	NA	-368	-13	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	0.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAAAAAAGATGA	1294	False	NA	NA	False	NA	NA	NA	86934910	86925879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_86926327_86933394_86933543_86934486
transcript_106004.nic	chr4	-	812	3	ISM	ENSG00000285458.1	ENST00000503001.5	708	5	-26	37740	-26	-37740	5prime_fragment	FALSE	canonical	3	8	junction_1	1	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAAAAAAAAAGATGA	0	True	NA	NA	False	NA	NA	NA	86936204	86925879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_86926327_86933394_86933543_86935987
transcript_106005.nnic	chr4	-	645	2	NIC	ENSG00000284968.1	novel	2158	4	NA	NA	-5	-12	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAAAAAAAGATGAT	-4	True	NA	NA	False	NA	NA	NA	86936184	86925878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_86926327_86935987
transcript_106006.known	chr4	-	434	2	FSM	ENSG00000284968.1	ENST00000509262.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAGTGAGTTATTATTA	1662	False	NA	NA	False	AATAAA	-12	NA	86934542	86933164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86933543_86934486
transcript_106008.known	chr4	-	5631	10	FSM	ENSG00000145332.14	ENST00000273963.10	5631	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	7.02376916856849	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCTAAAAGGTCTGT	3	True	NA	-9	True	ATTAAA	-29	NA	87220618	87160102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87185250_87185800_87195323_87195691_87220417
transcript_106009.known	chr4	-	4049	9	FSM	ENSG00000145332.14	ENST00000425278.6	4049	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	13.838352503098	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATAAAAAAGCAGAATCAA	20	True	NA	NA	False	NA	NA	NA	87220525	87161042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87195323_87195691_87220417
transcript_106010.known	chr4	-	2399	8	FSM	ENSG00000145332.14	ENST00000506985.5	2399	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.3888377251374	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGATTGAAATTACTGTT	158	False	NA	NA	False	ATTAAA	-18	NA	87220463	87162443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87195323_87195691_87220417
transcript_106024.known	chr4	-	1782	7	FSM	ENSG00000198189.11	ENST00000358290.9	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	10.9188929027728	455	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGATGTGAGGCTCA	-2	True	NA	90	True	AATAAA	-30	NA	87391188	87336514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87374698_87374831_87382254_87382363_87390860
transcript_106033.known	chr4	+	2820	8	FSM	ENSG00000170502.13	ENST00000302174.9	2820	8	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	45.460904935461	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTGTGAATTTTAAAC	-34	True	NA	10	True	AATAAA	-18	NA	87422572	87459455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87423013_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_106035.known	chr4	+	2458	8	FSM	ENSG00000170502.13	ENST00000473942.5	2458	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	111.96355092035	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTGTGAATTTTAAA	-10	True	NA	9	True	AATAAA	-17	NA	87422596	87459454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87422676_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_106039.known	chr4	+	951	7	FSM	ENSG00000170502.13	ENST00000440591.6	951	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	127.562729666623	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGCTTTATGCCAGTC	-1	True	NA	NA	False	NA	NA	NA	87422808	87457918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87423013_87434980_87435221_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_106049.known	chr4	+	690	6	FSM	ENSG00000170502.13	ENST00000512216.5	690	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	110.281458096998	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCCAAGACCACCTAGT	-18	True	NA	NA	False	AATAGA	-20	NA	87422588	87451714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87422618_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588
transcript_106050.known	chr4	-	2778	11	FSM	ENSG00000152583.13	ENST00000282470.11	2778	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.53534100123922	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	-6	True	NA	-5	True	AATAAA	-20	NA	87529376	87473334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87473804_87479429_87479579_87480371_87480521_87482423_87482561_87490272_87490394_87490759_87490879_87491617_87491691_87493581_87494599_87494980_87495128_87499520_87499586_87529044
transcript_106051.nnic	chr4	-	1007	5	NIC	ENSG00000152583.13	novel	2778	11	NA	NA	37757	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_4	6.05702071979286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	-8	True	NA	-5	True	AATAAA	-20	NA	87490862	87473334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_87473804_87479429_87479579_87480371_87480521_87482423_87482561_87490759
transcript_106071.nnic	chr4	+	949	3	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	688.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAACAGAAAATAAC	NA	False	NA	-93	True	TTTAAA	-34	NA	87884951	87932064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr4_+_87884960_87922149_87922401_87931374
transcript_106074.known	chr4	+	1561	7	FSM	ENSG00000118785.15	ENST00000395080.8	1561	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	32.401988965014	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTTTAAAGGTTT	0	True	NA	12	True	AATAAA	-23	NA	87975713	87983411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87980392_87980435_87981474_87981799_87982491
transcript_106075.known	chr4	+	1581	6	FSM	ENSG00000118785.15	ENST00000237623.11	1581	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	39.1233945357506	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATTTTGGTTTCAATT	NA	False	NA	27	True	AATAAA	-38	NA	87975666	87983426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87981474_87981799_87982491
transcript_106076.known	chr4	+	1196	6	FSM	ENSG00000118785.15	ENST00000360804.4	1196	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	54.8612796059297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAACTATCACTGTAT	0	True	NA	NA	False	ACTAAA	-38	NA	87975713	87983127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980392_87980435_87981474_87981799_87982491
transcript_106077.known	chr4	-	4206	16	FSM	ENSG00000118777.12	ENST00000237612.8	4206	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	8.8954420288645	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTTTATGTATTCTTT	-12	True	NA	NA	False	AATAAA	-17	NA	88158639	88090268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158385
transcript_106087.known	chr4	-	6309	7	FSM	ENSG00000163644.15	ENST00000608933.6	6309	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	9.71968220788222	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCAACTGTGT	-1	True	NA	-12	True	AATAAA	-18	NA	88284561	88257619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
transcript_106089.known	chr4	-	923	6	FSM	ENSG00000163644.15	ENST00000508256.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	20.448960853794	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGTGCAACAGTTTT	112	False	NA	NA	False	NA	NA	NA	88284631	88262576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88284405
transcript_106091.nic	chr4	-	1059	4	ISM	ENSG00000163644.15	ENST00000295908.11	1940	6	-129	6879	62	0	5prime_fragment	FALSE	canonical	3	60	junction_3	11.3431330181157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGGTACTACCACC	1	True	NA	NA	False	AAGAAA	-7	NA	88284707	88268749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_88268907_88277142_88277244_88278143_88278643_88284405
transcript_106095.known	chr4	-	1940	6	FSM	ENSG00000163644.15	ENST00000295908.11	1940	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.7831122533119	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATTGGCTGGGCGTGG	165	False	NA	NA	False	AGTAAA	-28	NA	88284578	88261870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88262727_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
transcript_106097.known	chr4	+	3776	23	FSM	ENSG00000138642.16	ENST00000264346.12	3776	23	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	6.62576987574131	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCATGTCGCTCAATT	1	True	NA	13	True	AATAAA	-20	NA	88378851	88443097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
transcript_106100.nic	chr4	+	2569	8	ISM	ENSG00000138642.16	ENST00000264346.12	3776	23	170	43311	31	17	5prime_fragment	FALSE	canonical	3	34	junction_2	6.34388666033558	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATTAGATAGTGACAAG	-25	True	NA	NA	False	NA	NA	NA	88379021	88399786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141
transcript_106105.nnic	chr4	-	1234	5	Antisense	novelGene_ENSG00000138642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	3.67423461417477	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTCAGTGATTTTGCT	-3	True	NA	-6	True	AATAAA	-14	NA	88456916	88415385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_88416080_88419301_88419409_88419573_88419700_88420355_88420412_88456665
transcript_106109.nnic	chr4	-	1260	5	Antisense	novelGene_ENSG00000138642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_3	1.92028643696715	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTCAGTGATTTTGCT	1	True	NA	-6	True	AATAAA	-14	NA	88456912	88415385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_88416080_88419301_88419409_88419573_88419713_88420355_88420429_88456665
transcript_106117.known	chr4	-	1311	2	FSM	ENSG00000145337.5	ENST00000273968.5	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-13	True	NA	-20	True	AATAAA	-30	NA	88523776	88520997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88522030_88523497
transcript_106118.nnic	chr4	-	1410	2	NNC	ENSG00000145337.5	novel	1311	2	NA	NA	-9570	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	NA	False	NA	-20	True	AATAAA	-30	NA	88533346	88520997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_88522030_88532968
transcript_106119.known	chr4	+	235	2	FSM	ENSG00000285122.1	ENST00000597259.2	235	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTTTATATTTTCAA	-3	True	NA	NA	False	NA	NA	NA	88523855	88524913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_88523933_88524755
transcript_106120.known	chr4	+	326	2	FSM	ENSG00000285122.1	ENST00000598772.1	326	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTAATTTTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	88523825	88524983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_88523933_88524764
transcript_106121.nnic	chr4	-	1886	2	Antisense	novelGene_ENSG00000249755.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGGACTTTTATGATT	NA	False	NA	NA	False	AATAAA	-18	NA	88534000	88526874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_88527729_88532968
transcript_106123.nnic	chr4	-	1381	2	Antisense	novelGene_ENSG00000249755.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGGACTTTTATGATT	NA	False	NA	NA	False	AATAAA	-18	NA	88533287	88526874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_88527937_88532968
transcript_106126.known	chr4	+	4914	26	FSM	ENSG00000138641.18	ENST00000402738.6	4914	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_25	4.8156411826464	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTTATTGTACTTGC	6	True	NA	10	True	AATAAA	-21	NA	88592479	88708539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_88592575_88595556_88595615_88605794_88606050_88649839_88650000_88652011_88652089_88652868_88653091_88654041_88654134_88655173_88655305_88655874_88656036_88658414_88658492_88662430_88662556_88664152_88664213_88667376_88667489_88667891_88668082_88669859_88670024_88670138_88670253_88676217_88676242_88676333_88676424_88677963_88678135_88680092_88680237_88681158_88681326_88686735_88686803_88687216_88687300_88704097_88704282_88704507_88704611_88706751
transcript_106127.known	chr4	-	1917	1	FSM	ENSG00000177432.8	ENST00000323061.7	1917	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGACTCGGTACTGT	-3	True	NA	NA	False	AATAAA	-22	NA	88697829	88695912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88695900_88697800
transcript_106134.known	chr4	-	4945	17	FSM	ENSG00000138640.15	ENST00000395002.6	4945	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	10.1972729197565	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTACTTTTATTGTGTT	2949	False	NA	NA	False	ATTAAA	-22	NA	88823361	88725954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88822975
transcript_106139.nnic	chr4	-	1740	5	NNC	ENSG00000138640.15	novel	2206	5	NA	NA	0	3486	intron_retention	FALSE	canonical	1	1	junction_1	28.4550083465108	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGAAAATTATGTAAAGAG	-14	True	NA	NA	False	NA	NA	NA	89057185	88986137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_88987052_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_106142.known	chr4	-	2762	5	FSM	ENSG00000138640.15	ENST00000509094.5	2762	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	22.7211355350035	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	9	True	NA	NA	False	AATAAA	-1	NA	89057162	88936282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_106143.nnic	chr4	-	1907	5	NNC	ENSG00000138640.15	novel	2206	5	NA	NA	0	3487	intron_retention	FALSE	canonical	1	2	junction_1	28.0624304008046	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAAATTATGTAAAGAGA	-14	True	NA	NA	False	NA	NA	NA	89057185	88986136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_88987218_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_106147.known	chr4	-	2206	5	FSM	ENSG00000138640.15	ENST00000515600.1	2206	5	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_4	26.892145693492	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	NA	False	NA	-12	True	AATAAA	-8	NA	89057345	88989623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937_89056989_89057117
transcript_106149.nic	chr4	-	2607	4	ISM	ENSG00000138640.15	ENST00000512339.5	1511	6	-35	80916	0	0	5prime_fragment	FALSE	canonical	3	12	junction_1	27.956315128349	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	-14	True	NA	NA	False	AATAAA	-1	NA	89057185	88936282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_88938242_89020459_89020670_89029459_89029650_89056937
transcript_106152.nic	chr4	-	2175	4	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	160	0	0	0	intron_retention	FALSE	canonical	3	49	junction_1	13.7679176187089	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	-14	True	NA	-12	True	AATAAA	-8	NA	89057185	88989623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937
transcript_106154.known	chr4	-	5866	24	FSM	ENSG00000138640.15	ENST00000264344.10	5866	24	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	14.2393793539477	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATAAGTACTTTTATT	-14	True	NA	NA	False	ATTAAA	-17	NA	89057185	88725959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88851019_88851184_88906378_88906463_88938087_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_106159.nic	chr4	-	827	3	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	160	30657	0	249	intron_retention	FALSE	canonical	3	53	junction_2	13.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGCAGAAAAAAAAAAACCA	-14	True	NA	NA	False	NA	NA	NA	89057185	89020280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_89020670_89029459_89029650_89056937
transcript_106160.nnic	chr4	-	380	2	NNC	ENSG00000138640.15	novel	5866	24	NA	NA	10	-35824	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGAAAATGTGCATA	-4	True	NA	NA	False	AATAAA	-17	NA	89057175	89056353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_89056496_89056937
transcript_106166.nnic	chr4	+	2175	4	NNC	ENSG00000251095.8	novel	2019	3	NA	NA	-53	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.49691252107735	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	NA	False	NA	8	True	AATAAA	-18	NA	89681451	89694130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_89681685_89686897_89687003_89691284_89691406_89692414
transcript_106167.nnic	chr4	+	2103	4	NNC	ENSG00000251095.8	novel	2019	3	NA	NA	-41	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.43650214343336	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	NA	False	NA	8	True	AATAAA	-18	NA	89681463	89694130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_89681685_89684444_89684490_89691284_89691406_89692414
transcript_106171.nnic	chr4	+	1019	3	NIC	ENSG00000251095.8	novel	1703	3	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTCAAGTGGTTTT	NA	False	NA	9	True	AATAAA	-18	NA	89490942	89720172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_89491495_89587820_89587941_89719825
transcript_106173.known	chr4	+	2010	3	FSM	ENSG00000251095.8	ENST00000513572.3	2019	3	7	2	7	-2	multi-exon	FALSE	canonical	3	12	junction_2	3	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	7	False	NA	8	True	AATAAA	-18	NA	89681511	89694130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89681685_89691284_89691406_89692414
transcript_106175.nic	chr4	+	787	3	FSM	ENSG00000251095.8	ENST00000691837.1	648	3	-139	0	-139	0	multi-exon	FALSE	canonical	2	7	junction_2	5.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTCAAGTGGTTTT	NA	False	NA	9	True	AATAAA	-18	NA	89681365	89720172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89681685_89691284_89691406_89719825
transcript_106177.nnic	chr4	+	1224	2	NIC	ENSG00000251095.8	novel	2422	2	NA	NA	-1	6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGAATTATGACTCTT	-1	True	NA	NA	False	AATAAA	-16	NA	89681503	89686455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_89681685_89685412
transcript_106178.known	chr4	+	1703	3	FSM	ENSG00000251095.8	ENST00000659714.1	1703	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGACTTGGAATTATG	-2	True	NA	NA	False	AATAAA	-10	NA	89490948	89686449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89491495_89587820_89587941_89685412
transcript_106179.known	chr4	-	1420	6	FSM	ENSG00000145335.17	ENST00000394986.5	1420	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	95.1419991381304	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTATCCCATCTC	25	True	NA	-3	True	AATAAA	-23	NA	89837139	89726052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836742
transcript_106180.known	chr4	-	3177	6	FSM	ENSG00000145335.17	ENST00000394991.8	3177	6	0	0	0	0	multi-exon	TRUE	canonical	3	258	junction_4	16.2283702200806	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	3	True	NA	-3	True	AATAAA	-21	NA	89837161	89724098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836961
transcript_106181.known	chr4	-	570	6	FSM	ENSG00000145335.17	ENST00000506244.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	96.3340023044823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTGCTCAGTTCCA	-4	True	NA	NA	False	NA	NA	NA	89837168	89726576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89837097
transcript_106182.known	chr4	-	3041	6	FSM	ENSG00000145335.17	ENST00000336904.7	3041	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	96.7313806373092	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-10	True	NA	-3	True	AATAAA	-21	NA	89838315	89724098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89838251
transcript_106195.known	chr4	-	3167	5	FSM	ENSG00000145335.17	ENST00000394989.6	3167	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	125.597322821786	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTATTTGGTTTCT	-35	True	NA	-9	True	AATAAA	-15	NA	89837199	89724104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89835546_89835693_89836961
transcript_1062.nnic	chr1	+	649	2	Antisense	novelGene_ENSG00000131697.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTACCTTTCTTCTTCACC	NA	False	NA	NA	False	ATTAAA	-14	NA	5897393	5902682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_5897585_5902224
transcript_106206.nnic	chr4	-	534	2	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	174	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGAGGTCTATAACC	NA	False	NA	30	True	AGTAAA	-6	NA	92263542	92257775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr4_-_92257958_92263190
transcript_106209.nnic	chr4	-	724	4	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-274	10954	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_1	361.637325998791	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGTACCTTTGAAATA	NA	False	NA	-7	True	TATAAA	-18	NA	92277349	92257812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_92257958_92263190_92263356_92269242_92269357_92277049
transcript_106215.nnic	chr4	-	694	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-376	5589	at_least_one_novel_splicesite	FALSE	canonical	3	891	junction_1	46	562	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGCAGACATCTCCT	NA	False	NA	-13	True	ATTAAA	-16	NA	92277451	92263177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_92263356_92269242_92269357_92277049
transcript_106216.nnic	chr4	-	566	2	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-377	-1535	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTAAGATGATTTTTT	NA	False	NA	0	True	ATTAAA	-18	NA	92277452	92270301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_92270465_92277049
transcript_106230.known	chr4	+	5783	16	FSM	ENSG00000152208.13	ENST00000282020.9	5783	16	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	58.5803911067707	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTGAAGTCTTAACTG	-16	True	NA	22	True	AATAAA	-24	NA	92303965	93774566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_92304745_92590130_92590287_93084994_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
transcript_106231.known	chr4	-	592	3	FSM	ENSG00000248511.1	ENST00000504213.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTTTATAGATTTTT	1431	False	NA	NA	False	AATAAA	-15	NA	92304178	92297250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_92297630_92300798_92300886_92304052
transcript_106243.nnic	chr4	-	534	4	NNC	ENSG00000246541.2	novel	1042	9	NA	NA	31848	-46203	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.8162545173751	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCTATTATGATAGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	94175708	94163994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_94164232_94165115_94165197_94165847_94165926_94175570
transcript_106249.known	chr4	+	5017	24	FSM	ENSG00000163104.18	ENST00000359052.8	5017	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_18	57.6282329463101	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTTTCACACCCT	-10	True	NA	15	True	AATAAA	-16	NA	94207610	94291290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_106251.known	chr4	+	5094	24	FSM	ENSG00000163104.18	ENST00000354268.9	5094	24	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_18	51.1679838462341	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTCACACCCTTT	-12	True	NA	17	True	AATAAA	-18	NA	94207864	94291292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_106258.known	chr4	+	4649	24	FSM	ENSG00000163104.18	ENST00000457823.6	4649	24	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_18	55.8308273756017	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTAATTTTTGGAAA	142	False	NA	101	True	AATAAA	-18	NA	94207844	94290821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_106262.nic	chr4	+	1284	5	ISM	ENSG00000163104.18	ENST00000359052.8	5017	24	-13	53779	-13	-36189	5prime_fragment	FALSE	canonical	3	125	junction_1	42.8565922583679	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATCACCTGACCCTA	-23	True	NA	NA	False	ACTAAA	-11	NA	94207597	94237511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951
transcript_106265.nic	chr4	+	1364	5	ISM	ENSG00000163104.18	ENST00000510105.5	2409	17	-13	39648	8	-36189	5prime_fragment	FALSE	canonical	3	145	junction_1	34.7014048706965	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATCACCTGACCCTA	-24	True	NA	NA	False	ACTAAA	-11	NA	94207852	94237511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951
transcript_106267.nnic	chr4	+	1193	4	NIC	ENSG00000163104.18	novel	2409	17	NA	NA	8	-36191	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	86.0555376228372	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAATCACCTGACCC	-24	True	NA	NA	False	AATAAA	-45	NA	94207852	94237509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_94208071_94208345_94208585_94226118_94226297_94236951
transcript_106272.known	chr4	+	331	1	FSM	ENSG00000241103.1	ENST00000478069.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAACTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	94369832	94370163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94369800_94370200
transcript_106275.known	chr4	+	6043	13	FSM	ENSG00000163110.15	ENST00000317968.9	6043	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	31.2786535302699	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCTCCTTTTTGTTGT	0	True	NA	23	True	AATAAA	-23	NA	94451941	94668223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_106280.known	chr4	+	2020	9	FSM	ENSG00000163110.15	ENST00000380180.7	2020	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	121.180070040415	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTCATTTGGAAATCAT	128	False	NA	NA	False	AATAAA	-11	NA	94451856	94588216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575942_94576035_94584985_94585004_94585564_94585738_94586407_94586445_94586988
transcript_106281.nic	chr4	+	1400	8	NIC	ENSG00000163110.15	novel	2020	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_7	84.9544896172206	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAGAAAAT	127	False	NA	NA	False	NA	NA	NA	94451855	94587286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94586988
transcript_106286.nic	chr4	+	623	4	NIC	ENSG00000163110.15	novel	463	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	123.307204439427	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	127	False	NA	28	True	AATAAA	-30	NA	94451855	94549986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549793
transcript_106287.known	chr4	+	743	4	FSM	ENSG00000163110.15	ENST00000509333.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	32.6224190124249	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTAATAACATTTT	199	False	NA	NA	False	AATAAA	-30	NA	94451927	94573735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350
transcript_106289.known	chr4	+	538	3	FSM	ENSG00000163110.15	ENST00000504489.3	538	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	142	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATCTTCTTTTACTCAA	0	True	NA	NA	False	AATAAA	-8	NA	94451941	94456164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94455818
transcript_106291.known	chr4	+	1189	3	FSM	ENSG00000163110.15	ENST00000359265.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	143	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTAACGGAGTCTCCT	157	False	NA	NA	False	ATTAAA	-16	NA	94451885	94457184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94456243
transcript_106292.nnic	chr4	+	543	3	NNC	ENSG00000163110.15	novel	1189	3	NA	NA	-1	2851	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	143	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGAGTATTTTCTTTT	127	False	NA	NA	False	AATAAA	-22	NA	94451855	94460035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_94451996_94455246_94455385_94459770
transcript_106294.nic	chr4	+	941	3	ISM	ENSG00000163110.15	ENST00000509333.5	743	4	-72	49349	-1	-25600	5prime_fragment	FALSE	canonical	3	270	junction_2	10	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTGTGTATACAG	127	False	NA	NA	False	NA	NA	NA	94451855	94524386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_94451996_94455246_94455385_94523723
transcript_106296.known	chr4	+	463	3	FSM	ENSG00000163110.15	ENST00000511767.3	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	125.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	2	True	NA	28	True	AATAAA	-30	NA	94455266	94549986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94455385_94523723_94523876_94549793
transcript_106319.nnic	chr4	-	1142	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	7.36357401145817	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGAGTTTTCTTGGGT	NA	False	NA	NA	False	AATAAA	-13	NA	97141412	97103806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97104239_97110020_97110427_97134546_97134736_97141297
transcript_106330.nnic	chr4	-	1841	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_2	0.5	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTCAGTGATTAAT	NA	False	NA	-14	True	AATAAA	-42	NA	97141473	97133324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97134736_97139504_97139759_97141297
transcript_106332.nnic	chr4	-	1537	2	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTAATCAACTATTTGG	NA	False	NA	-3	True	AATAAA	-24	NA	97141412	97133313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97134736_97141297
transcript_106338.known	chr4	+	2092	15	FSM	ENSG00000138698.15	ENST00000339360.9	2092	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	38.5360287290229	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	61	False	NA	NA	False	NA	NA	NA	98261517	98442334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_106345.known	chr4	+	1942	14	FSM	ENSG00000138698.15	ENST00000408900.7	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	43.8855423619484	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	61	False	NA	NA	False	NA	NA	NA	98261517	98442334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_106348.known	chr4	+	1686	13	FSM	ENSG00000138698.15	ENST00000264572.11	1686	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.0162448898658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCCCGATACACGGCA	31	False	NA	NA	False	NA	NA	NA	98261430	98442117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_106353.nnic	chr4	+	1126	8	NNC	ENSG00000138698.15	novel	3747	15	NA	NA	-5	4485	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	66.6033032213869	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCATTCATTTATGATGT	12	True	NA	NA	False	AATAAA	-30	NA	98261411	98409071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98408862
transcript_106361.known	chr4	+	875	6	FSM	ENSG00000138698.15	ENST00000507303.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	54.9836339286519	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATTGTTTATGAGAG	46	False	NA	4	True	AGTAAA	-17	NA	98261502	98392252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
transcript_106368.known	chr4	+	941	5	FSM	ENSG00000138698.15	ENST00000511379.5	941	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	24.3977457975117	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGAGTAGCTTTAAAAT	3	True	NA	NA	False	AATAAA	-36	NA	98261459	98379490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016
transcript_106373.known	chr4	+	537	5	FSM	ENSG00000138698.15	ENST00000510870.5	537	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	86.6295994449934	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACCTTAGTGAAATTACT	29	False	NA	NA	False	NA	NA	NA	98261485	98391989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343320_98352475_98352602_98391951
transcript_106376.known	chr4	+	496	4	FSM	ENSG00000138698.15	ENST00000515187.5	496	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	85.8461155530963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACGATAGCCGTAAGTG	22	False	NA	NA	False	NA	NA	NA	98261478	98352588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343320_98352475
transcript_106377.known	chr4	-	397	2	FSM	ENSG00000214559.3	ENST00000356499.2	397	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCATTCTTGAAGTAA	NA	False	NA	NA	False	AATAAA	-15	NA	98261630	98251687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98252006_98261551
transcript_106378.known	chr4	-	1191	8	FSM	ENSG00000168785.8	ENST00000505184.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	69.8076073276855	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTTGTCCTCA	1093	False	NA	NA	False	AAAAAG	-45	NA	98657692	98472209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98657539
transcript_106384.known	chr4	-	1132	8	FSM	ENSG00000151247.13	ENST00000504432.5	1132	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	1025.48564901052	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	9	True	NA	NA	False	NA	NA	NA	98929125	98880844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98909677_98909960_98929094
transcript_106389.known	chr4	-	1097	7	FSM	ENSG00000151247.13	ENST00000280892.10	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	846.036527317559	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTCTGTAATAGTTCAG	3558	False	NA	NA	False	CATAAA	-12	NA	98929092	98880764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98928894
transcript_10639.known	chr1	+	1671	13	FSM	ENSG00000132676.16	ENST00000471642.6	1671	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	129.654883783407	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	13	False	NA	15	True	AATAAA	-11	NA	155687966	155738526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155688193_155689094_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_106394.known	chr4	-	574	2	FSM	ENSG00000151247.13	ENST00000418385.2	574	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTCTCAAACTCCTGGA	9	True	NA	NA	False	TTTAAA	-38	NA	98929125	98925971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98926515_98929094
transcript_106395.known	chr4	-	2427	7	FSM	ENSG00000151247.13	ENST00000450253.7	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_6	341.078518167819	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCATTGTAAAATTT	1	True	NA	-4	True	AATAAA	-17	NA	98929133	98879275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_106396.known	chr4	-	686	6	FSM	ENSG00000151247.13	ENST00000511644.5	686	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	881.614745793195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	3549	False	NA	NA	False	NA	NA	NA	98929101	98880844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98881143_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_1064.known	chr1	+	4302	16	FSM	ENSG00000069424.16	ENST00000378097.6	4302	16	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	15.4939414682715	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTCCTCTCATTTC	778	False	NA	27	True	AATAAA	-29	NA	5992261	6101193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_5992789_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_106401.nic	chr4	+	2845	12	NIC	ENSG00000164024.12	novel	2686	11	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	170.759799399358	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	40	False	NA	27	True	ATTAAA	-21	NA	98995659	99062809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_98995868_99005768_99005867_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
transcript_106407.known	chr4	+	2686	11	FSM	ENSG00000164024.12	ENST00000296411.11	2686	11	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_9	39.9854973709219	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	-10	True	NA	27	True	ATTAAA	-21	NA	98995720	99062809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
transcript_106431.known	chr4	-	2652	9	FSM	ENSG00000197894.12	ENST00000296412.14	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_8	205.407521770747	15586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGGTGGTGGTAAGT	NA	False	NA	16	True	AATAAA	-22	NA	99088788	99070977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99072442_99072572_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_106432.known	chr4	-	1475	7	FSM	ENSG00000197894.12	ENST00000512621.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	96.7585769956453	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAACATAATAAAAGTAA	3510	False	NA	-61	True	CATAAA	-25	NA	99085216	99072185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114
transcript_106433.known	chr4	-	1909	6	FSM	ENSG00000197894.12	ENST00000508511.5	1909	6	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_5	244.553797762374	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAATTAAAATAT	9	True	NA	NA	False	NA	NA	NA	99088717	99075224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_106441.known	chr4	+	1412	3	FSM	ENSG00000246090.8	ENST00000670724.1	1412	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTAGAAGCACCCTCCTG	109	False	NA	NA	False	AATATA	-34	NA	99088804	99155234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_99089285_99133554_99133806_99154553
transcript_106442.known	chr4	+	1910	10	FSM	ENSG00000246090.8	ENST00000661393.1	1910	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.52066211505664	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGAGTTCTTTAATG	-4	True	NA	NA	False	TATAAA	-11	NA	99088859	99301333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_99089285_99133554_99133806_99157490_99157580_99204356_99204432_99286794_99287034_99288665_99288786_99290936_99291006_99300298_99300371_99300468_99300656_99300950
transcript_106445.known	chr4	-	3516	8	FSM	ENSG00000145331.14	ENST00000394877.7	3516	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	9.99591753402052	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTGCTGAAATACAGA	-12	True	NA	NA	False	AATAAA	-42	NA	99564017	99546708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563912
transcript_106447.known	chr4	-	3547	8	FSM	ENSG00000145331.14	ENST00000394876.7	3547	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	12.0559918204812	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTCTGCTGAAATACA	-4	True	NA	NA	False	AATAAA	-40	NA	99564039	99546710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563912
transcript_106460.known	chr4	-	846	3	FSM	ENSG00000145331.14	ENST00000507394.1	846	3	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	15.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGTCTCTTTAGAGAGT	363	False	NA	NA	False	AAAACA	-35	NA	99563672	99557688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99558212_99559153_99559362_99563557
transcript_106461.known	chr4	-	802	6	FSM	ENSG00000145331.14	ENST00000455368.6	802	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	13.6733317081098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATTAGTAGATCACAACC	-18	True	NA	NA	False	AATATA	-39	NA	99563730	99553812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563557
transcript_106462.known	chr4	+	3920	18	FSM	ENSG00000138823.14	ENST00000265517.10	3920	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.823529411764706	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAATTCCTTTTGTCTT	2	True	NA	NA	False	AATAAA	-14	NA	99574823	99623997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_99574971_99581904_99582093_99583373_99583518_99589642_99589751_99591234_99591352_99591650_99591791_99594732_99594884_99597066_99597225_99600564_99600734_99601606_99601715_99606747_99606961_99608765_99608978_99611142_99611241_99611331_99611454_99612912_99613141_99618973_99619099_99621060_99621232_99622676
transcript_106466.known	chr4	-	961	6	FSM	ENSG00000109270.13	ENST00000515100.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	135.90790999791	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTTTCCTTTGTACAT	-12	True	NA	-8	True	AATAAA	-13	NA	99894428	99881492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99894334
transcript_106469.known	chr4	-	4163	7	FSM	ENSG00000109270.13	ENST00000499666.7	4163	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_5	28.3117564901148	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTGGACATATGTGTAT	-11	True	NA	NA	False	AAGAAA	-31	NA	99894427	99878335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_106470.known	chr4	-	1220	7	FSM	ENSG00000109270.13	ENST00000226522.8	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	135.668714153264	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGAGCACTGTATAGG	40	True	NA	-43	True	AATAAA	-19	NA	99894376	99881206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885655_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_106473.known	chr4	-	5967	8	FSM	ENSG00000164031.17	ENST00000442697.7	5967	8	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_5	14.0900891496434	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTTTATCATGTTT	3919	False	99946632	4	True	AATAAA	-23	NA	99946618	99896247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99930449_99930622_99946438
transcript_106480.nic	chr4	-	595	4	ISM	ENSG00000164031.17	ENST00000426476.5	662	5	-73	14283	-13	28	5prime_fragment	FALSE	canonical	1	2	junction_1	63.9808999276781	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCTGTCTTTAGAATTC	1	True	NA	NA	False	AGTAAA	-24	NA	99946631	99923011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_99923186_99924759_99924816_99930449_99930622_99946438
transcript_106481.known	chr4	-	561	4	FSM	ENSG00000164031.17	ENST00000471738.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	62.230753383409	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCTGTTGTTTTGCGTG	3963	False	NA	4	True	AATAAA	-27	NA	99946574	99923680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99923878_99924759_99924816_99930449_99930622_99946438
transcript_106486.known	chr4	-	960	3	FSM	ENSG00000164031.17	ENST00000474664.5	960	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTTTATTTTCC	3977	False	NA	NA	False	TTTAAA	-26	NA	99946560	99922519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99923186_99930449_99930622_99946438
transcript_106489.known	chr4	+	1647	2	FSM	ENSG00000245322.7	ENST00000666876.1	1647	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTGGAGAGGGATGAAA	11	False	NA	NA	False	AGTAAA	-25	NA	99950544	99952424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_99950681_99950913
transcript_1065.known	chr1	+	2134	16	FSM	ENSG00000069424.16	ENST00000428161.6	2134	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	14.6872582722425	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGGAATCTGGGGCCT	26	False	NA	NA	False	NA	NA	NA	6026012	6099119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_106505.known	chr4	-	726	5	FSM	ENSG00000164032.12	ENST00000529158.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5343.59379888666	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTTATAGTAACAAACA	238	False	NA	-4	True	TTTAAA	-28	NA	99950299	99948171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99948524_99948810_99948941_99949272_99949387_99949662_99949741_99950247
transcript_106515.known	chr4	-	868	5	FSM	ENSG00000164032.12	ENST00000651623.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	1	129	junction_1	5302.10656249004	15867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-7	True	NA	-35	True	AATAAA	-15	NA	99950280	99948087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99948524_99948813_99948941_99949272_99949387_99949662_99949741_99950167
transcript_106516.known	chr4	-	1843	2	FSM	ENSG00000164032.12	ENST00000511348.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	11803	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTGTATTAAATTTGCT	-1	True	NA	-33	True	AATAAA	-17	NA	99950355	99948085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99949741_99950167
transcript_106517.known	chr4	-	435	4	FSM	ENSG00000164032.12	ENST00000527366.1	435	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5712.18313976559	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGAAGGAATTTTTTG	283	False	NA	NA	False	TTTAAA	-9	NA	99950254	99948777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99948941_99949272_99949380_99949662_99949741_99950167
transcript_106518.known	chr4	-	2604	3	FSM	ENSG00000145358.6	ENST00000273990.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1.5	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCCTCTTTTTTT	-2	True	NA	-3	True	AATAAA	-18	NA	100190468	100185869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_100188168_100189892_100190033_100190302
transcript_10652.known	chr1	-	2654	11	FSM	ENSG00000163374.20	ENST00000404643.5	2654	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	83.3863897767495	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-3	True	NA	-3	True	AATAAA	-29	NA	155688757	155659445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_106525.known	chr4	+	790	2	FSM	ENSG00000254531.2	ENST00000527564.2	822	2	28	4	4	0	multi-exon	FALSE	canonical	3	8	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTGTTTTATTTCCA	10	True	NA	15	True	AATAAA	-15	NA	101347779	101348883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_101348010_101348323
transcript_106526.known	chr4	+	442	2	FSM	ENSG00000254531.2	ENST00000529296.2	648	2	40	166	16	-162	multi-exon	FALSE	canonical	1	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCGCCACAGAGTC	22	False	NA	NA	False	NA	NA	NA	101347791	101348721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_101347836_101348323
transcript_106529.known	chr4	-	3238	8	FSM	ENSG00000138821.14	ENST00000394833.6	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	34.3546925173139	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	340	False	NA	-2	True	ATTAAA	-42	NA	102345139	102261665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
transcript_10653.known	chr1	-	2626	11	FSM	ENSG00000163374.20	ENST00000295566.8	2626	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	117.907124466675	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-7	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
transcript_106535.known	chr4	-	610	4	FSM	ENSG00000248161.5	ENST00000506972.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACCAAGGACTCTG	NA	False	NA	NA	False	NA	NA	NA	102431290	102418807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102418989_102419696_102419795_102430396_102430499_102431061
transcript_106537.nnic	chr4	-	690	3	NIC	ENSG00000248161.5	novel	608	2	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	1	True	ATTAAA	-21	NA	102431268	102418601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_102418989_102419263_102419360_102431061
transcript_106538.known	chr4	-	673	3	FSM	ENSG00000248161.5	ENST00000502883.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	1	True	ATTAAA	-21	NA	102431249	102418601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102418989_102419696_102419795_102431061
transcript_106539.nnic	chr4	-	694	3	NIC	ENSG00000248161.5	novel	610	4	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	1	True	ATTAAA	-21	NA	102431266	102418601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_102418989_102430396_102430499_102431061
transcript_106540.known	chr4	-	608	2	FSM	ENSG00000248161.5	ENST00000505709.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	1	True	ATTAAA	-21	NA	102431282	102418601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102418989_102431061
transcript_106542.known	chr4	+	4055	24	FSM	ENSG00000109320.13	ENST00000226574.9	4055	24	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.42449235966509	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGATCTGTGCAAA	-50	True	NA	16	True	AATAAA	-25	NA	102501358	102617302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102501789_102525511_102525558_102529835_102529915_102533844_102533886_102537857_102537957_102566986_102567136_102576875_102577040_102578880_102579040_102580534_102580640_102582865_102582958_102584681_102584821_102593424_102593569_102594891_102594982_102596137_102596333_102597519_102597662_102600894_102601010_102606495_102606698_102607149_102607320_102607648_102607752_102610574_102610700_102612043_102612111_102612433_102612607_102613424_102613582_102616433
transcript_106545.known	chr4	-	4001	17	FSM	ENSG00000109323.11	ENST00000647097.2	4001	17	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_15	18.3982633351629	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCTCAAGGGCTGGG	26	False	102760981	NA	False	AATAAA	-7	NA	102760968	102630769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
transcript_106548.known	chr4	-	2577	16	FSM	ENSG00000109323.11	ENST00000505239.1	2577	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	29.9387522934555	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAACAGAGACAAGGAGAG	11	True	NA	NA	False	AATAAA	-30	NA	102760933	102631987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102723861_102723968_102726588_102726684_102760717
transcript_106557.known	chr4	-	582	2	FSM	ENSG00000109323.11	ENST00000507358.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGCTGTGTATGTTG	0	True	NA	NA	False	AATGAA	-20	NA	102760994	102753690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102753996_102760717
transcript_106559.known	chr4	-	3356	18	FSM	ENSG00000109323.11	ENST00000646727.1	3356	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	33.4401288055664	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATATTTCATCTGTG	-8	True	NA	-8	True	AATAAA	-22	NA	102760952	102631494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102670915_102671012_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
transcript_106566.known	chr4	-	574	8	FSM	ENSG00000109332.20	ENST00000502404.5	574	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1645.49428092942	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	-2	True	NA	-60	True	NA	NA	NA	102825780	102797398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825721
transcript_106567.known	chr4	-	577	8	FSM	ENSG00000109332.20	ENST00000507845.5	577	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1647.14062693443	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTGGAATAAACTTTAA	-7	True	NA	-46	True	NA	NA	NA	102825785	102797384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825737
transcript_106569.known	chr4	-	2368	8	FSM	ENSG00000109332.20	ENST00000394801.8	2368	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1498.1571400646	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	235	False	NA	-23	True	AATAAA	-17	NA	102827948	102795975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827591
transcript_10657.known	chr1	-	2723	11	FSM	ENSG00000163374.20	ENST00000355499.9	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_10	59.3202326360914	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-20	True	NA	-11	True	AATAAA	-21	NA	155688774	155659453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_106570.known	chr4	-	838	8	FSM	ENSG00000109332.20	ENST00000349311.12	838	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1481.7266954469	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	-43	True	NA	75	True	NA	NA	NA	102827849	102797263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827734
transcript_106571.known	chr4	-	896	8	FSM	ENSG00000109332.20	ENST00000338145.7	896	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1484.59358830927	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAAGTTCTTCCAGCTT	17	True	NA	87	True	NA	NA	NA	102868875	102797251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102868714
transcript_106586.known	chr4	-	4166	8	FSM	ENSG00000109332.20	ENST00000394804.6	4166	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1498.1571400646	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGTCTTACTCGGT	235	False	NA	-4	True	ATTAAA	-15	NA	102827948	102794385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827591
transcript_106597.known	chr4	-	1087	8	FSM	ENSG00000109332.20	ENST00000321805.11	1087	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1495.47454757645	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGACAATAACTGCTTT	-1	True	NA	NA	False	NA	NA	NA	102827553	102797234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827426
transcript_106599.known	chr4	-	711	7	FSM	ENSG00000109332.20	ENST00000350435.11	711	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1580.504736539	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCCAGCTTTGGAC	0	True	NA	92	True	NA	NA	NA	102825860	102797246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825737
transcript_1066.known	chr1	+	3878	15	FSM	ENSG00000069424.16	ENST00000666163.1	3878	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	11.1458329359781	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTTTTTGCTCCTCTC	341	False	NA	22	True	AATAAA	-24	NA	5992638	6101188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_106600.known	chr4	-	660	7	FSM	ENSG00000109332.20	ENST00000357194.10	660	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1573.05664940021	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTGATTTTCTTAT	-4	True	NA	-18	True	AATAAA	-15	NA	102868896	102797356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102868714
transcript_106605.known	chr4	-	578	7	FSM	ENSG00000109332.20	ENST00000504211.5	578	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1580.97206384764	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCTCATCTTTTTTAA	0	True	NA	17	True	TTTAAA	-43	NA	102825542	102797321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825477
transcript_106606.known	chr4	-	527	7	FSM	ENSG00000109332.20	ENST00000505207.5	527	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1580.03762261817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTACTGTTCCTTTTTTG	-2	True	NA	-28	True	AATAAA	-5	NA	102825780	102797366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825721
transcript_106615.known	chr4	+	883	2	FSM	ENSG00000246560.3	ENST00000501133.3	1351	2	444	24	-233	-24	multi-exon	FALSE	canonical	3	11	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTTTGCAGTCCACT	89	False	NA	NA	False	NA	NA	NA	102828054	102844075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102828186_102843323
transcript_106617.known	chr4	-	3729	8	FSM	ENSG00000109332.20	ENST00000453744.7	3729	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1198.44547269386	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	1	True	NA	-1	True	ATTAAA	-18	NA	102827551	102794382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
transcript_106618.known	chr4	-	2227	8	FSM	ENSG00000109332.20	ENST00000394803.9	2227	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1399.8698627562	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	6	True	NA	-23	True	AATAAA	-17	NA	102828159	102795975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827943
transcript_106619.known	chr4	-	1845	12	FSM	ENSG00000164037.17	ENST00000296422.12	1845	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.82725011293107	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTCTTGGTATTTACAT	-25	True	NA	NA	False	AATAAA	-18	NA	103019705	102900927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102901333_102905513_102905651_102906535_102906645_102910438_102910589_102911430_102911538_102932123_102932300_102945192_102945321_102946646_102946790_102949256_102949428_102989799_102989942_102991642_102991713_103019598
transcript_106629.nic	chr4	-	1139	8	NIC	ENSG00000164037.17	novel	1184	9	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	2.29462548631557	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAATGAATTATTTCAC	NA	False	NA	12	True	ATTAAA	-29	NA	103019743	102901087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_102901333_102905513_102905651_102906535_102906645_102910438_102910589_102911430_102911538_102932123_102932300_102991642_102991713_103019598
transcript_106632.known	chr4	+	852	4	FSM	ENSG00000145354.12	ENST00000646632.1	852	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	492.550505024612	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCTATGGATCCAAAG	-23	True	NA	NA	False	AATAAA	-34	NA	102868973	102887681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102869188_102882791_102882874_102885215_102885431_102887340
transcript_106638.known	chr4	+	471	4	FSM	ENSG00000145354.12	ENST00000574446.1	471	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	492.025970407615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACATAATAAACACAATGAA	-7	True	NA	NA	False	NA	NA	NA	102869053	102887359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102869188_102882770_102882874_102885215_102885431_102887340
transcript_106642.known	chr4	+	1738	4	FSM	ENSG00000145354.12	ENST00000643561.1	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	509.828075596732	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTTTGTGCTTTTTA	-21	True	NA	26	True	AATAAA	-17	NA	102869321	102888567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102869456_102874509_102874672_102885215_102885431_102887340
transcript_106650.known	chr4	+	808	3	FSM	ENSG00000145354.12	ENST00000503643.1	808	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	541.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTACATTGTTAAATATG	-7	True	NA	NA	False	TTTAAA	-6	NA	102869335	102887756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102869513_102885215_102885431_102887340
transcript_106661.nic	chr4	-	1241	11	NIC	ENSG00000164039.15	novel	2920	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_9	140.140964746215	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-13	True	NA	-8	True	AATAAA	-15	NA	103099881	103079476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
transcript_10667.known	chr1	-	2524	10	FSM	ENSG00000163374.20	ENST00000347088.9	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	111.367260299725	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-27	True	NA	-3	True	AATAAA	-29	NA	155688698	155659445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
transcript_106673.known	chr4	-	824	4	FSM	ENSG00000164038.16	ENST00000505838.1	824	4	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	9.46337971105226	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTCACATAGCTGTC	-1	True	NA	NA	False	NA	NA	NA	103076336	103065410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103065769_103066326_103066508_103067460_103067593_103076183
transcript_106676.known	chr4	-	2046	9	FSM	ENSG00000164039.15	ENST00000492366.5	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_8	39.2515923243886	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-3	True	NA	-8	True	AATAAA	-15	NA	103099828	103079476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_106677.known	chr4	-	2920	10	FSM	ENSG00000164039.15	ENST00000296424.9	2920	10	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_9	38.5403428201068	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGATCTGAGTTAGTCT	-9	True	NA	NA	False	AATAAA	-38	NA	103099834	103077591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_106678.known	chr4	-	616	6	FSM	ENSG00000164039.15	ENST00000509245.1	616	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	170.411736685007	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTAAAGTAAGACCACCA	-2	True	NA	NA	False	NA	NA	NA	103099870	103091184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
transcript_10668.known	chr1	-	2555	10	FSM	ENSG00000163374.20	ENST00000368330.6	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	103.225511250076	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-7	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
transcript_106685.known	chr4	+	881	4	FSM	ENSG00000248740.7	ENST00000656104.1	881	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	NA	False	NA	7	True	AATAAA	-16	NA	103255825	103453755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103256295_103343091_103343236_103436934_103437047_103453599
transcript_106687.known	chr4	+	774	4	FSM	ENSG00000248740.7	ENST00000668077.1	774	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCTCTCTAATATGTG	NA	False	NA	NA	False	AATAAA	-38	NA	103255821	103371857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103255947_103256177_103256295_103343091_103343236_103371469
transcript_106692.nnic	chr4	+	776	3	NIC	ENSG00000248740.7	novel	881	4	NA	NA	-3	0	intron_retention	TRUE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	NA	False	NA	7	True	AATAAA	-16	NA	103255818	103453755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_103256295_103343091_103343236_103453599
transcript_106694.known	chr4	+	1257	3	FSM	ENSG00000248740.7	ENST00000656681.1	1257	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTGAAGGTTTGTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	103255825	103454275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103256295_103436934_103437047_103453599
transcript_106695.known	chr4	+	931	3	FSM	ENSG00000248740.7	ENST00000657481.2	940	3	9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACATGTGAAGGTTTGTT	-7	True	NA	NA	False	ATTAAA	-15	NA	103425041	103454274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103425186_103436934_103437047_103453599
transcript_106697.nnic	chr4	+	651	2	NIC	ENSG00000248740.7	novel	881	4	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	NA	False	NA	7	True	AATAAA	-16	NA	103255799	103453755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_103256295_103453599
transcript_106698.known	chr4	-	5359	5	FSM	ENSG00000169836.5	ENST00000304883.3	5359	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	5.40254569624358	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTTACTACTTTCCTA	-2	True	NA	NA	False	ATTAAA	-20	NA	103719985	103586030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103589995_103591486_103591684_103656193_103656345_103658214_103658404_103719127
transcript_1067.known	chr1	+	4001	15	FSM	ENSG00000069424.16	ENST00000352527.6	4001	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.50724750398562	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGGTCTCTGTGACTTTT	176	False	NA	12	True	AATAAA	-14	NA	6026162	6101178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_106704.known	chr4	-	3130	3	FSM	ENSG00000168772.11	ENST00000466963.1	3130	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACTGTGTGTTTTATA	-6	True	NA	NA	False	AATGAA	-18	NA	104494901	104469513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_104472367_104494505_104494582_104494700
transcript_106705.known	chr4	-	5569	3	FSM	ENSG00000168772.11	ENST00000394767.3	5569	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTATTTTTCCATGAT	1	True	NA	-6	True	AATAAA	-19	NA	104494894	104468307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_104472367_104490743_104492060_104494700
transcript_106707.nic	chr4	-	1120	11	NIC	ENSG00000138777.20	novel	1665	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	183.975786450283	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-5	True	NA	-5	True	AATAAA	-17	NA	105474070	105369564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105473893
transcript_106714.known	chr4	-	667	6	FSM	ENSG00000138777.20	ENST00000354147.7	667	6	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_5	259.885821083029	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	15	True	NA	-5	True	AATAAA	-17	NA	105474050	105369564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105473893
transcript_106716.known	chr4	-	1665	12	FSM	ENSG00000138777.20	ENST00000341695.10	1665	12	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_6	51.2240258711308	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTTACTTTCATTT	3	True	NA	-16	True	AATAAA	-18	NA	105474062	105369076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_106717.known	chr4	-	1072	10	FSM	ENSG00000138777.20	ENST00000351450.10	1072	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	199.232415925611	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-2	True	NA	-5	True	AATAAA	-17	NA	105474067	105369564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105473893
transcript_106718.known	chr4	-	1414	11	FSM	ENSG00000138777.20	ENST00000348706.9	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	172.855691257187	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATTTT	1	True	NA	NA	False	NA	NA	NA	105474064	105369242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_106719.known	chr4	-	1177	13	FSM	ENSG00000138777.20	ENST00000509031.5	1177	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	240.951066954821	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	-3	True	NA	-1	True	AATAAA	-21	NA	105474014	105369560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456247_105456292_105456680_105456746_105473893
transcript_106720.known	chr4	-	859	8	FSM	ENSG00000138777.20	ENST00000432483.6	859	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	234.084669837777	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	15	True	NA	-5	True	AATAAA	-17	NA	105474050	105369564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105456680_105456746_105473893
transcript_106721.known	chr4	-	631	5	FSM	ENSG00000138777.20	ENST00000499847.6	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_3	47.4150556258242	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCTATACTCAAGTT	6	True	NA	-1	True	AATAAA	-18	NA	105474059	105446201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_106734.known	chr4	-	1718	8	FSM	ENSG00000138785.16	ENST00000340139.10	1718	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	57.3378814838953	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	-12	True	NA	0	True	AATAAA	-17	NA	105708689	105682626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105703647_105703810_105708637
transcript_106736.nic	chr4	-	2251	7	NIC	ENSG00000138785.16	novel	1927	8	NA	NA	0	0	intron_retention	FALSE	canonical	3	11	junction_6	73.6215925451826	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	12	True	NA	0	True	AATAAA	-17	NA	105708665	105682626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105707918
transcript_106737.known	chr4	-	1975	7	FSM	ENSG00000138785.16	ENST00000451321.6	1975	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	51.1351694585591	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	NA	False	NA	0	True	AATAAA	-17	NA	105709108	105682626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105708637
transcript_106741.known	chr4	-	1502	7	NNC	ENSG00000138785.16	novel	1975	7	NA	NA	8065	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	77.5686076250495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTATTGTTTCTTAC	8661	False	NA	-3	True	AATAAA	-14	NA	105700016	105682629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_105682807_105682807_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849
transcript_106742.known	chr4	+	4304	12	FSM	ENSG00000138780.15	ENST00000515279.6	4304	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	13.3094138063165	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTTCTCCTAAGATTT	-15	True	NA	9	True	AATAAA	-21	NA	105708783	105847725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953_105823070_105823230_105823276_105825671_105825801_105834460_105834595_105837858_105837890_105842064_105842135_105845440
transcript_106746.known	chr4	+	2228	6	FSM	ENSG00000138780.15	ENST00000484843.1	2228	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	13.5292276202302	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	-12	True	NA	NA	False	TTTAAA	-3	NA	105708786	105823690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953
transcript_106748.nic	chr4	+	1579	3	ISM	ENSG00000138780.15	ENST00000484843.1	2228	6	-8	103737	1	394	5prime_fragment	FALSE	canonical	3	114	junction_2	6.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAAAATCTTGTCAGCT	-20	True	NA	NA	False	NA	NA	NA	105708778	105719953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_105709017_105717592_105718040_105719059
transcript_106749.known	chr4	+	4561	12	FSM	ENSG00000168743.13	ENST00000379987.7	4561	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	0.88139633771206	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTGTCTATTCTTGTTT	-1	True	NA	NA	False	AATAAA	-37	NA	105895470	105971671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_105895724_105897900_105898002_105927335_105927429_105937008_105937129_105938300_105938421_105940074_105940210_105940513_105940637_105942306_105942703_105958470_105958558_105959027_105959127_105967187_105967445_105968894
transcript_106751.nic	chr4	-	3530	26	NIC	ENSG00000145348.17	novel	7961	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_25	18.112272082762	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACCCAAACAAGGGGGA	-22	True	NA	NA	False	AATAAA	-20	NA	106316266	106046090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
transcript_106755.nic	chr4	-	2463	22	NIC	ENSG00000145348.17	novel	7961	26	NA	NA	0	-11221	combination_of_known_junctions	FALSE	canonical	3	39	junction_21	18.5538378229191	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGACTATGAAATAATGAC	-22	True	NA	NA	False	AATAAA	-19	NA	106316266	106193573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
transcript_106757.nic	chr4	-	912	6	NIC	ENSG00000145348.17	novel	3566	27	NA	NA	0	-2976	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	44.3188447502865	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAACTAAAAGGTATGTA	-22	True	NA	NA	False	NA	NA	NA	106316266	106254959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_106255048_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
transcript_106759.nic	chr4	-	1243	3	ISM	ENSG00000145348.17	ENST00000509532.5	848	6	0	42502	0	670	5prime_fragment	FALSE	canonical	3	39	junction_2	29.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTTCCTGTATTTTT	-22	True	NA	NA	False	NA	NA	NA	106316266	106294485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_106295167_106308767_106308990_106315926
transcript_106760.known	chr4	-	3312	24	FSM	ENSG00000145348.17	ENST00000361687.8	3312	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	29.7106397979288	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGGGATGTGTGTGTGT	14	True	NA	NA	False	AATAAA	-31	NA	106316230	106046079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106295093_106295167_106308767_106308990_106315930
transcript_106762.known	chr4	+	1665	9	FSM	ENSG00000164022.18	ENST00000672911.1	1665	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	290.558836554664	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCTCTCCTTTTCAA	32	False	NA	NA	False	NA	NA	NA	106316577	106348077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316595_106320865_106320890_106321176_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_106764.known	chr4	+	1607	8	FSM	ENSG00000164022.18	ENST00000672337.1	1607	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	268.212830507751	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGACATTAGAGAAA	4	True	NA	-39	True	AATAAA	-12	NA	106316549	106347704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_106771.known	chr4	+	2412	7	FSM	ENSG00000164022.18	ENST00000358008.7	2412	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	227.412254140654	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGACTGATATTTTGC	-9	True	NA	90	True	AATAAA	-17	NA	106315695	106348491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316345_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_106773.known	chr4	+	2710	7	FSM	ENSG00000164022.18	ENST00000673123.1	2710	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	228.901482932918	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGTCATTCTTTTGGG	9	True	NA	-28	True	AATGAA	-24	NA	106316554	106349183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316810_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_106776.known	chr4	+	1716	7	FSM	ENSG00000164022.18	ENST00000672285.1	1716	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	228.529173921697	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAGTAGTTTCTAATAA	34	False	NA	-22	True	AATGAA	-17	NA	106316579	106348379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316645_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_106784.known	chr4	+	2001	1	FSM	ENSG00000164022.18	ENST00000682186.1	2001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAATTACTATATTC	7	True	NA	NA	False	AAGAAA	-10	NA	106316522	106318523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316500_106318500
transcript_106785.known	chr4	+	568	5	FSM	ENSG00000164022.18	ENST00000510207.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	259.567428619232	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCCGTCTGGATCT	0	True	NA	NA	False	AAAACA	-38	NA	106315543	106331730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106315637_106324984_106325119_106327450_106327565_106328075_106328244_106331671
transcript_106786.known	chr4	+	2773	7	FSM	ENSG00000164022.18	ENST00000672341.1	2773	7	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	43.5418062198721	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGCATCATCAGTAG	4	True	NA	NA	False	AATAAA	-28	NA	106316549	106349456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_106787.known	chr4	+	5164	7	FSM	ENSG00000164022.18	ENST00000672328.1	5164	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	228.529173921697	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTTATACCTAAAATATGA	32	False	NA	13	True	AATAAA	-16	NA	106316577	106347756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106320714_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_106788.known	chr4	-	3654	4	FSM	ENSG00000155011.9	ENST00000285311.8	3654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGCTCCTTGTCTTTT	-3	True	NA	NA	False	ATTAAA	-23	NA	107036313	106921801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_106924205_106924544_106924701_106925798_106925950_107035369
transcript_106796.known	chr4	-	2513	12	FSM	ENSG00000138801.9	ENST00000265174.5	2513	12	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_6	44.6034872446109	2342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGATCTATTTTATA	-2	True	NA	-8	True	AATAAA	-21	NA	107720234	107613665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_107614388_107631630_107631861_107644801_107645071_107653490_107653627_107654694_107654901_107656895_107657008_107659958_107660073_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_106797.known	chr4	-	2892	2	FSM	ENSG00000245293.4	ENST00000658105.2	2905	2	13	0	13	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATTAGCTCACAATAAAA	17	False	NA	NA	False	TTTAAA	-3	NA	107989679	107907769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_107910550_107989567
transcript_106798.known	chr4	+	1964	9	FSM	ENSG00000138796.18	ENST00000639146.1	1964	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	146.777893430857	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGGTAATTTAGGCAG	-10	True	NA	2	True	TATAAA	-32	NA	107989836	108035149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108027938_108028070_108033175_108033293_108034238
transcript_106799.known	chr4	+	1752	9	FSM	ENSG00000138796.18	ENST00000403312.6	1752	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	148.70939571863	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAATACACTCAAATGA	1	True	NA	-29	True	TATAAA	-1	NA	107989895	108035118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108028860_108028870_108033175_108033293_108034238
transcript_106800.known	chr4	+	1895	9	FSM	ENSG00000138796.18	ENST00000640060.1	1895	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	142.572788427526	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATCACTGTTGCAAAT	7	True	NA	-36	True	NA	NA	NA	107989901	108035022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108004663_108004918_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_106804.known	chr4	+	1803	8	FSM	ENSG00000138796.18	ENST00000309522.8	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	21.3331207472401	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	-6	True	NA	24	True	AGTAAA	-21	NA	107989888	108035171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_106809.known	chr4	+	522	4	FSM	ENSG00000138796.18	ENST00000681992.1	522	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	171.68640663204	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGAAGGCTCTCCGCTG	1	True	NA	NA	False	NA	NA	NA	107989895	108018511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108018445
transcript_106810.known	chr4	+	3325	3	FSM	ENSG00000138796.18	ENST00000515462.7	3325	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	176.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCATTTGTGTAAAACCT	NA	False	NA	94	True	TTTAAA	-31	NA	108025864	108035241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108028070_108033175_108033293_108034238
transcript_106811.known	chr4	+	741	5	FSM	ENSG00000138796.18	ENST00000638621.1	741	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	145.449948435879	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCTATCGAAGTGATTA	7	True	NA	21	True	AATAAA	-15	NA	107989853	108034488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_106818.known	chr4	+	853	6	FSM	ENSG00000109475.17	ENST00000394668.2	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_5	10818.5164713097	14722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	25	False	NA	30	True	TATAAA	-25	NA	108620655	108630412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
transcript_106822.known	chr4	+	549	6	FSM	ENSG00000109475.17	ENST00000506397.5	549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11445.965287384	14675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTATGACTTTTTTTT	2	True	NA	13	True	AATAAA	-40	NA	108620632	108625252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108620713_108621630_108621697_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_106833.known	chr4	+	529	5	FSM	ENSG00000109475.17	ENST00000394665.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	3	2142	junction_1	9300.97281202348	44123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGACTTTTTTTTTTT	-5	True	NA	16	True	AATAAA	-43	NA	108620589	108625255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_106847.known	chr4	+	546	5	FSM	ENSG00000109475.17	ENST00000394667.8	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	12362	junction_1	5106.08707818423	121092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTGGTTTGG	1	True	NA	131	True	NA	NA	NA	108620575	108625370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_106861.known	chr4	+	1062	4	FSM	ENSG00000198856.13	ENST00000361564.9	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	2708	junction_3	102.795373869104	20826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTATATTTGTTTTT	-15	True	NA	29	True	AATAAA	-17	NA	108650598	108667820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108667246
transcript_106862.known	chr4	+	876	3	FSM	ENSG00000198856.13	ENST00000613215.4	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	1447	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTTTTATATTTGTTT	NA	False	NA	27	True	AATAAA	-15	NA	108650584	108667818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108650795_108655563_108655658_108667246
transcript_106863.known	chr4	+	331	2	FSM	ENSG00000198856.13	ENST00000510556.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGGCTAGAGTATTCAT	13	True	NA	NA	False	NA	NA	NA	108650626	108657612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108650795_108657449
transcript_106865.known	chr4	-	2086	13	FSM	ENSG00000164089.9	ENST00000296486.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.50792752997486	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAAAAAAATTACTAG	-2	True	NA	NA	False	AATAAA	-14	NA	108763053	108742052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_108742613_108743788_108743857_108746398_108746530_108746761_108746852_108748004_108748160_108749237_108749464_108750935_108751019_108752894_108753012_108754619_108754711_108756417_108756493_108759748_108759909_108760187_108760307_108762842
transcript_106875.known	chr4	+	5083	24	FSM	ENSG00000138802.11	ENST00000265175.5	5083	24	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	29.8473748342975	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATATATATGAATCAATA	-25	True	NA	NA	False	NA	NA	NA	109433814	109540896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
transcript_106887.known	chr4	-	957	3	FSM	ENSG00000247950.8	ENST00000499359.2	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCACTTATGTTGATG	NA	False	NA	NA	False	AATAAA	-24	NA	109433817	109429962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109430781_109431691_109431747_109433733
transcript_106889.known	chr4	+	2230	8	FSM	ENSG00000005059.16	ENST00000394650.7	2230	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	35.7850727059682	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATACAAGTTAAATCAG	-15	True	NA	-59	True	AATAAA	-18	NA	109560245	109688719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_109560437_109659010_109659087_109660194_109660366_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
transcript_106890.nnic	chr4	+	1483	8	NIC	ENSG00000005059.16	novel	581	6	NA	NA	325	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_1	92.07583387444	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTTGAAGTTCTCAA	222	False	NA	17	True	ATTAAA	-17	NA	109560570	109687716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_109561018_109659010_109659087_109660194_109660366_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
transcript_106898.known	chr4	-	1634	7	FSM	ENSG00000138794.10	ENST00000265164.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	10.3869576339219	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTACATTTTTCTA	-15	True	NA	-26	True	AATAAA	-15	NA	109703445	109688627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703355
transcript_106908.known	chr4	-	1347	4	FSM	ENSG00000138794.10	ENST00000352981.7	1347	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	139.905523677786	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTTTCTAACTCAC	11	True	NA	-20	True	AATAAA	-21	NA	109703419	109688621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109703355
transcript_106914.known	chr4	-	5219	4	FSM	ENSG00000123739.11	ENST00000243501.10	5219	4	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	51.3830927662225	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGTGTCATCTTTTAT	-23	True	NA	-2	True	AATAAA	-13	NA	109730070	109709988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109714496_109717547_109717714_109718682_109718760_109729601
transcript_106920.known	chr4	-	755	3	FSM	ENSG00000123739.11	ENST00000507961.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAATTTATATCTTG	14	True	NA	10	True	CATAAA	-37	NA	109729956	109714261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109714496_109717547_109717714_109729601
transcript_106921.known	chr4	-	364	1	FSM	ENSG00000272795.1	ENST00000609440.1	364	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGTGTGTGTAATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	109815410	109815046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109815000_109815400
transcript_106926.known	chr4	+	1015	7	FSM	ENSG00000109534.17	ENST00000226796.7	1015	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	64.5327221045434	6906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	-1	True	NA	18	True	AATAAA	-18	NA	109815761	109824737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_10693.known	chr1	+	2056	13	FSM	ENSG00000132676.16	ENST00000368336.10	2056	13	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_3	29.6660814549021	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTGTACTGTTTTAC	4	True	NA	NA	False	AATAAA	-32	NA	155689090	155739010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_10694.known	chr1	+	1649	13	FSM	ENSG00000132676.16	ENST00000343043.7	1649	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	92.5021020782171	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	-4	True	NA	15	True	AATAAA	-11	NA	155689082	155738526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689244_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_10695.known	chr1	+	1470	12	FSM	ENSG00000132676.16	ENST00000421487.6	1470	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	101.206768140058	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	4	True	NA	15	True	AATAAA	-11	NA	155689090	155738526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_106955.known	chr4	+	1011	7	FSM	ENSG00000109534.17	ENST00000394631.7	1011	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	155.259728627012	6048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGAGTGTGTTTATTAA	-11	True	NA	21	True	AATAAA	-21	NA	109815509	109824740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_109815546_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_106957.nnic	chr4	-	884	4	Antisense	novelGene_ENSG00000180245.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	1.69967317119759	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAATCAAATACATAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	109846607	109828482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_109828793_109843171_109843528_109844125_109844194_109846457
transcript_10696.known	chr1	+	1894	12	FSM	ENSG00000132676.16	ENST00000535183.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	104.543003923847	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	4	True	NA	NA	False	NA	NA	NA	155689090	155738971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_106963.known	chr4	-	610	5	FSM	ENSG00000170522.10	ENST00000506625.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	122.727340067322	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTCCTGCACTGGTATC	-16	True	NA	NA	False	NA	NA	NA	110199009	110051725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198841
transcript_106966.known	chr4	-	6570	4	FSM	ENSG00000170522.10	ENST00000302274.8	6570	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	29.227080289044	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-15	True	NA	0	True	AATAAA	-27	NA	110198615	110045845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246
transcript_10697.known	chr1	+	679	2	FSM	ENSG00000132676.16	ENST00000476444.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTGTTAGATTAATAA	NA	False	NA	18	True	AATAAA	-14	NA	155736757	155738529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155737064_155738156
transcript_106973.nic	chr4	-	632	3	NIC	ENSG00000170522.10	novel	204	2	NA	NA	-3	324	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	12	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGGAGCCACGCCATT	-11	True	NA	-12	True	AATAAA	-14	NA	110199202	110197566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_110197975_110198246_110198368_110199099
transcript_106985.nnic	chr4	-	1799	3	Fusion	ENSG00000250511.1_ENSG00000250103.3	novel	1447	4	NA	NA	28	724	multi-exon	FALSE	canonical	2	19	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAATGAATGAATAGATG	-8	True	NA	NA	False	AAAAAG	-13	NA	110615575	110511763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr4_-_110513200_110513445_110513540_110615306
transcript_106986.nnic	chr4	-	1245	3	Fusion	ENSG00000250511.1_ENSG00000250103.3	novel	1447	4	NA	NA	-204	-62	multi-exon	FALSE	canonical	2	19	junction_1	0	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGTATTGGCTTACA	7299	False	NA	1	True	ATTAAA	-19	NA	110615807	110512549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr4_-_110513200_110513445_110513540_110615306
transcript_106990.known	chr4	-	493	4	FSM	ENSG00000250103.3	ENST00000503456.1	493	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCTCCAGGGCAGAAGA	-17	True	NA	NA	False	NA	NA	NA	110615415	110603360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110603433_110604050_110604274_110606209_110606299_110615306
transcript_106998.nnic	chr4	-	633	3	NNC	ENSG00000250103.3	novel	602	2	NA	NA	-323	-9	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	26	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACATTTCTAAATTA	7180	False	NA	-14	True	AATAAA	-19	NA	110615926	110595512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_110595809_110615306_110615495_110615777
transcript_106999.nnic	chr4	-	619	3	NNC	ENSG00000250103.3	novel	602	2	NA	NA	-430	-9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	31	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACATTTCTAAATTA	7073	False	NA	-14	True	AATAAA	-19	NA	110616033	110595512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_110595809_110615306_110615495_110615898
transcript_1070.nic	chr1	+	741	8	NIC	ENSG00000069424.16	novel	599	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	25.3256343474757	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGCAAATCCCCTGATCA	-40	True	NA	2	True	ATTAAA	-14	NA	5992642	6086362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6085739_6085794_6086157
transcript_107004.known	chr4	-	448	2	FSM	ENSG00000250103.3	ENST00000513690.3	602	2	145	9	-43	-9	multi-exon	FALSE	canonical	3	64	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACATTTCTAAATTA	7648	False	NA	-14	True	AATAAA	-19	NA	110615458	110595512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110595809_110615306
transcript_107007.nic	chr4	-	668	2	ISM	ENSG00000250103.3	ENST00000503456.1	493	4	-438	2817	-250	-2817	5prime_fragment	FALSE	canonical	3	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCACCTCATTGTGCTAA	7253	False	NA	NA	False	AATATA	-18	NA	110615853	110606177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_110606299_110615306
transcript_107009.known	chr4	-	1897	5	FSM	ENSG00000164093.18	ENST00000394595.8	1897	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.4013220313574	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-1	True	NA	-9	True	AGTAAA	-17	NA	110637011	110617422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110618689_110621163_110621370_110632342_110632481_110632952_110633009_110636780
transcript_10701.known	chr1	-	4801	22	NNC	ENSG00000116580.20	novel	4973	21	NA	NA	0	-60	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	44.9712430160953	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATGAGATGGAAAGGAT	2133	False	NA	NA	False	NA	NA	NA	155857295	155764843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_155764883_155764885_155766710_155767424_155767542_155771066_155771218_155773065_155773211_155775001_155775174_155776394_155776482_155777621_155777821_155783985_155784090_155785333_155785375_155795049_155795152_155804948_155805142_155813633_155813805_155814329_155814450_155815804_155815901_155816211_155816263_155820605_155820657_155821473_155821549_155822285_155822477_155826836_155827029_155853275_155853807_155857146
transcript_107011.known	chr4	-	2100	4	FSM	ENSG00000164093.18	ENST00000355080.9	2100	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10.1434160364686	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	4827	False	NA	-9	True	AGTAAA	-17	NA	110637352	110617422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110618689_110621163_110621370_110632952_110633009_110636780
transcript_107015.known	chr4	-	2294	3	FSM	ENSG00000164093.18	ENST00000644743.1	2294	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-4	True	NA	-9	True	AGTAAA	-17	NA	110623077	110617422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110618689_110621163_110621370_110622255
transcript_107016.nnic	chr4	+	700	2	Genic_Genomic	ENSG00000289096.1	novel	797	1	NA	NA	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTTTTTTTCTTTCT	-1	True	NA	8	True	AATAAA	-16	NA	110619746	110620545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr4_+_110619819_110619917
transcript_107020.nnic	chr4	-	1784	2	NNC	ENSG00000164093.18	novel	1608	3	NA	NA	911	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	3301	False	NA	-9	True	AGTAAA	-17	NA	110619805	110617422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_110618689_110619287
transcript_107022.known	chr4	+	8844	2	FSM	ENSG00000174749.6	ENST00000309733.6	8844	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCCTTCTGAGTGTCTC	-2	True	NA	NA	False	AATAAA	-17	NA	112145453	112195256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112145734_112186692
transcript_107024.known	chr4	-	2036	1	FSM	ENSG00000260526.1	ENST00000562919.1	2036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACAGTAATTATTTCA	557	False	NA	NA	False	AATAAA	-23	NA	112231596	112229560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112229600_112231600
transcript_107030.known	chr4	+	5915	10	FSM	ENSG00000138660.12	ENST00000274000.10	5915	10	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_7	8.96632933414756	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCATCTGATTCTTGA	-1	True	NA	NA	False	AATAAA	-18	NA	112231786	112273110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_107032.nic	chr4	+	1129	9	ISM	ENSG00000138660.12	ENST00000274000.10	5915	10	-67	6280	-20	0	5prime_fragment	FALSE	canonical	3	372	junction_7	8.11537891906472	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACACTTTTTAGACCA	8470	False	NA	NA	False	AATAAA	-21	NA	112231719	112266830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587
transcript_107034.known	chr4	+	2337	9	FSM	ENSG00000138660.12	ENST00000309703.10	2337	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	123.300192619476	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGGCCCTTTCAATAT	8	False	NA	NA	False	TATAAA	-39	NA	112231832	112269677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_107037.known	chr4	+	390	2	FSM	ENSG00000138660.12	ENST00000506522.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGTTGTAAAGAGGGA	64	False	NA	NA	False	ATTAAA	-26	NA	112231888	112253311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112232175_112253207
transcript_107039.nnic	chr4	+	528	3	NNC	ENSG00000073331.18	novel	304	2	NA	NA	35	8621	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATTAATTAATGAGAAGA	66	False	NA	NA	False	AATAAA	-17	NA	112285543	112324926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_112285762_112315800_112315853_112324668
transcript_10704.nic	chr1	-	869	4	ISM	ENSG00000116580.20	ENST00000437809.5	7713	32	-19	72730	-19	0	5prime_fragment	FALSE	canonical	2	12	junction_3	29.8775277870621	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAAAGAAAAAGGGT	9	True	NA	NA	False	AAGAAA	-10	NA	155859419	155822446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_155822477_155826836_155827029_155853275_155853807_155859303
transcript_107040.known	chr4	-	4163	2	FSM	ENSG00000145365.11	ENST00000361717.4	4163	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTTGTTATTATTTTA	2	True	NA	0	True	NA	NA	NA	112285904	112274536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112278435_112285639
transcript_107046.known	chr4	-	794	6	FSM	ENSG00000138658.16	ENST00000503172.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	16.2480768092719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGAACATTGTGACTT	-11	True	NA	NA	False	AATATA	-9	NA	112636898	112619517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112619691_112620001_112620191_112623816_112623877_112631929_112632011_112633155_112633243_112636694
transcript_107051.nic	chr4	-	544	4	NIC	ENSG00000138658.16	novel	731	6	NA	NA	-2	-9589	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	33.9247533357118	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTAGTTTTTTTTTGT	482	False	112636928	NA	False	ATTAAA	-14	NA	112636912	112629701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_112630016_112631929_112632011_112633155_112633243_112636850
transcript_107057.known	chr4	+	2020	13	FSM	ENSG00000174720.17	ENST00000509622.5	2020	13	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	166.321705505392	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	-32	True	NA	9	True	AATAAA	-17	NA	112637126	112657586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637240_112644667_112644769_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_107061.known	chr4	+	2107	13	FSM	ENSG00000174720.17	ENST00000344442.10	2107	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	158.087792065042	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	-16	True	NA	9	True	AATAAA	-17	NA	112637142	112657586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637240_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_107066.known	chr4	+	2164	13	FSM	ENSG00000174720.17	ENST00000324052.10	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	164.019540671904	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGATTTTGTTTTT	297	False	NA	15	True	AATAAA	-23	NA	112637455	112657592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_10708.nic	chr1	-	754	3	NIC	ENSG00000116580.20	novel	471	4	NA	NA	-39	-5968	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	29.5	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTATGTGTTTTTGT	2172	False	NA	NA	False	AATAAA	-19	NA	155857256	155832837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_155832951_155853275_155853807_155857146
transcript_10709.nnic	chr1	-	1360	3	NNC	ENSG00000116580.20	novel	7745	32	NA	NA	-39	-23296	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	33.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTTATTACTTTGAAA	2172	False	NA	NA	False	AATAAA	-43	NA	155857256	155850165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_155850885_155853275_155853807_155857146
transcript_107090.known	chr4	+	1047	7	FSM	ENSG00000174720.17	ENST00000505034.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	185.192692440424	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGATGCAGAATCCCT	297	False	NA	NA	False	NA	NA	NA	112637455	112647449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198
transcript_10712.known	chr1	+	1709	14	FSM	ENSG00000203761.5	ENST00000314835.5	1709	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	80.4261578337877	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCCAGTGTGGGAGAAA	12	False	NA	NA	False	NA	NA	NA	155745828	155750137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155745913_155746004_155746141_155746618_155746689_155746795_155746872_155747128_155747184_155747268_155747408_155747562_155747681_155747761_155747897_155747976_155748128_155748399_155748532_155748605_155748789_155749326_155749432_155749521_155749632_155749922
transcript_107135.known	chr4	+	424	2	FSM	ENSG00000174720.17	ENST00000504079.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGCTCACGCCTGTA	34	True	NA	NA	False	ATTAAA	-19	NA	112637192	112638020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637240_112637643
transcript_107139.known	chr4	-	294	2	FSM	ENSG00000249532.6	ENST00000505215.2	336	2	37	5	-3	0	multi-exon	FALSE	canonical	3	15732	junction_1	0	5008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTGTTTCTGTGCCAG	-2	True	NA	-18	True	AATAAA	-13	NA	112648703	112646724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112646969_112648653
transcript_107140.known	chr4	-	345	3	FSM	ENSG00000249532.6	ENST00000509938.2	389	3	41	3	0	2	multi-exon	FALSE	canonical	3	18107	junction_2	4356	8901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	2	True	NA	-16	True	AATAAA	-15	NA	112648699	112646722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112646969_112647414_112647468_112648653
transcript_107141.known	chr4	-	640	3	FSM	ENSG00000249532.6	ENST00000510655.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAGTTATTCTTGATTC	1679	False	NA	NA	False	TATAAA	-13	NA	112650051	112646475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112646969_112648512_112648600_112649991
transcript_107142.known	chr4	+	834	2	ISM	ENSG00000174720.17	ENST00000685424.1	1472	3	791	2934	791	-219	5prime_fragment	FALSE	canonical	3	531	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCTTAAAGTTTTAAA	553	False	NA	NA	False	NA	NA	NA	112653097	112654762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_112653237_112654067
transcript_107143.known	chr4	-	740	2	FSM	ENSG00000250046.3	ENST00000505632.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAATATATTTTATATA	43	False	NA	-49	True	TTTAAA	-8	NA	112706810	112693046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112693686_112706709
transcript_107144.known	chr4	-	796	1	FSM	ENSG00000241741.1	ENST00000482859.1	796	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	264	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACTGTTGAGTTTTC	20	False	NA	NA	False	ACTAAA	-10	NA	112788878	112788082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112788100_112788900
transcript_107147.known	chr4	+	398	2	FSM	ENSG00000145362.21	ENST00000514246.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTCAGAGAGGTTAC	7	True	NA	NA	False	AATAAA	-17	NA	113049655	113070150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_113049813_113069909
transcript_107149.known	chr4	+	4339	2	FSM	ENSG00000145362.21	ENST00000502701.2	4339	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACGCAACCAAGTTTCAAT	8567	False	NA	NA	False	AAAAAG	-13	NA	113290164	113303731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_113293539_113302766
transcript_107153.known	chr4	-	348	1	FSM	ENSG00000196656.7	ENST00000485827.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3618	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	21	False	NA	NA	False	NA	NA	NA	113214393	113214045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113214000_113214400
transcript_107154.known	chr4	-	1940	19	FSM	ENSG00000145349.18	ENST00000342666.9	1940	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	38.308405743613	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTTTTTTTTTTAA	1551	False	NA	NA	False	NA	NA	NA	113761068	113454104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113454516_113455725_113455822_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_107155.known	chr4	-	5820	18	FSM	ENSG00000145349.18	ENST00000296402.9	5820	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	28.548750268068	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCATGGCTCTGTGGTC	692	False	NA	-6	True	AATAAA	-21	NA	113761927	113451031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113454516_113457290_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_107156.known	chr4	-	5294	18	FSM	ENSG00000145349.18	ENST00000394524.7	5294	18	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	15.6488278522319	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCATGGCTCTGTGGTC	1	True	NA	-6	True	AATAAA	-21	NA	113761445	113451031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113454516_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_107158.known	chr4	-	1642	17	FSM	ENSG00000145349.18	ENST00000379773.6	1642	17	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	12.8640730330638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTCTCTGGAAAGATC	1489	False	NA	-20	True	AATAAA	-20	NA	113761130	113457187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_107159.known	chr4	-	860	3	FSM	ENSG00000145349.18	ENST00000509907.1	860	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	60.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCATTACTGCTCTTC	1203	False	NA	NA	False	ATTAAA	-25	NA	113761416	113754738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113755091_113759319_113759415_113761003
transcript_107164.known	chr4	-	4603	2	FSM	ENSG00000180801.14	ENST00000315366.8	4603	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCCTGGTGGCACAT	2	True	NA	-6	True	AATAAA	-18	NA	113979647	113900283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113903676_113978436
transcript_10717.known	chr1	+	5182	4	FSM	ENSG00000132718.9	ENST00000368324.5	5182	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.2836838484589	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGTCAGCCTGATTC	4	True	NA	17	True	AATAAA	-24	NA	155859566	155885199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155859796_155867964_155868792_155880499_155880624_155881197
transcript_107176.known	chr4	+	3733	6	FSM	ENSG00000174607.11	ENST00000310836.11	3733	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	23.1257432312996	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	24	True	NA	NA	False	AATAAA	-17	NA	114598806	114678225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_114598975_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
transcript_10718.known	chr1	-	855	6	FSM	ENSG00000143622.11	ENST00000368322.7	855	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	97.2946041669321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACTAGGAGTTTTTAATG	-1	True	NA	NA	False	NA	NA	NA	155910915	155900273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155910655_155910805_155910877
transcript_107180.known	chr4	-	639	1	FSM	ENSG00000250442.1	ENST00000514461.1	639	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAGGTGTTTAATAAAGA	NA	False	NA	NA	False	NA	NA	NA	116044045	116043406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_116043400_116044000
transcript_107181.known	chr4	-	2023	1	FSM	ENSG00000174599.5	ENST00000310754.5	2023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAACTTAGTCTTTTTT	-13	True	NA	NA	False	ATTAAA	-18	NA	117085576	117083553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_117083600_117085600
transcript_107182.known	chr4	+	473	4	FSM	ENSG00000269893.9	ENST00000688996.1	528	4	49	6	0	0	multi-exon	FALSE	canonical	3	82	junction_1	297.983221004136	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATTGTTCCTTGACTG	-4	True	NA	13	True	AATAAA	-19	NA	118278754	118279821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118278793_118278943_118279138_118279388_118279432_118279623
transcript_107183.known	chr4	+	309	4	FSM	ENSG00000269893.9	ENST00000602483.6	353	4	41	3	0	-1	multi-exon	FALSE	canonical	3	26	junction_1	320.479155155041	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	-4	True	NA	12	True	AATAAA	-18	NA	118278754	118279820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118278793_118279106_118279138_118279388_118279432_118279623
transcript_107185.known	chr4	+	6165	3	FSM	ENSG00000269893.9	ENST00000654083.2	6166	3	1	0	1	0	multi-exon	FALSE	canonical	3	415	junction_1	198	4224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATGGAGAGTAATCAAG	NA	False	NA	NA	False	AGTAAA	-38	NA	118278708	118285316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118279138_118279388_118279432_118279623
transcript_107186.known	chr4	+	327	3	FSM	ENSG00000269893.9	ENST00000602520.6	335	3	4	4	1	0	multi-exon	FALSE	canonical	3	282	junction_1	264.5	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	NA	False	NA	15	True	AATAAA	-21	NA	118278708	118279823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118278793_118279388_118279432_118279623
transcript_107189.known	chr4	+	815	2	FSM	ENSG00000269893.9	ENST00000652022.2	818	2	0	3	0	-1	multi-exon	FALSE	canonical	3	415	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	-4	True	NA	12	True	AATAAA	-18	NA	118278754	118279820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118279138_118279388
transcript_107191.known	chr4	+	1105	1	FSM	ENSG00000269893.9	ENST00000667980.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTGTTCCTTGACTGA	-9	True	NA	14	True	AATAAA	-20	NA	118278717	118279822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118278700_118279800
transcript_1072.known	chr1	+	736	8	FSM	ENSG00000069424.16	ENST00000656198.1	736	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	23.716867329358	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAAATCCCCTGATCAC	8	False	NA	3	True	ATTAAA	-15	NA	6026293	6086363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6086157
transcript_107200.known	chr4	+	6625	11	FSM	ENSG00000145388.15	ENST00000628452.2	6625	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.8825812524473	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTCATAATTCATGAA	20	False	NA	18	True	AATAAA	-20	NA	118685412	118715433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118685601_118687922_118688012_118689369_118689469_118691541_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
transcript_107211.nic	chr4	+	1046	8	ISM	ENSG00000145388.15	ENST00000388822.10	6642	11	-26	14649	-26	3426	5prime_fragment	FALSE	canonical	2	157	junction_3	29.055892654661	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCCAGAAAAGAACGTAAG	NA	False	NA	NA	False	NA	NA	NA	118685365	118700781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_118685601_118687922_118688012_118689369_118689458_118691531_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549
transcript_107214.nic	chr4	+	1963	7	ISM	ENSG00000145388.15	ENST00000388822.10	6642	11	-26	16958	-26	1117	5prime_fragment	FALSE	canonical	2	157	junction_3	29.763885648364	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTTGGAAAAAGGAG	NA	False	NA	NA	False	NA	NA	NA	118685365	118698472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_118685601_118687922_118688012_118689369_118689458_118691531_118691613_118691980_118692069_118694435_118694527_118697181
transcript_10722.known	chr1	-	919	5	FSM	ENSG00000143622.11	ENST00000539040.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	95.1482396053653	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCACATTAGAATTTG	-10	True	NA	-33	True	NA	NA	NA	155911402	155900182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155911242
transcript_107221.nnic	chr4	+	761	3	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-288	-185851	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	2	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAATATTTATTAAC	NA	False	NA	4	True	AATAAA	-15	NA	118850399	118851596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_118850589_118850711_118850941_118851253
transcript_107222.nnic	chr4	+	865	3	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-288	-185747	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	2	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGAGAATAGTGGCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	118850399	118851700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_118850589_118850711_118850941_118851253
transcript_107227.nnic	chr4	+	1178	2	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-288	-185747	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGAGAATAGTGGCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	118850399	118851700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_118850589_118850711
transcript_107243.nnic	chr4	+	885	8	NIC	ENSG00000145390.12	novel	5449	16	NA	NA	-44	-10822	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	12.9803619332578	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCGTGTTTTAATGAAT	-1	True	NA	NA	False	AATAAA	-3	NA	119212668	119260531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_119212874_119217549_119217674_119245336_119245430_119248747_119248883_119256245_119256360_119256440_119256524_119259819_119259926_119260506
transcript_107247.known	chr4	+	504	4	FSM	ENSG00000145390.12	ENST00000514305.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.09901951359278	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGACTTGGTTTTCCTT	28	False	NA	-76	True	AATATA	-10	NA	119212742	119220211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119220115
transcript_107249.known	chr4	+	503	4	FSM	ENSG00000145390.12	ENST00000507597.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	15.5777619273972	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCCAACTCTACATCT	26	False	NA	NA	False	AAAACA	-32	NA	119212740	119239341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119212874_119217549_119217674_119235289_119235412_119239217
transcript_107253.nic	chr4	+	586	3	NIC	ENSG00000145390.12	novel	504	4	NA	NA	0	79	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	19.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAAATTGCTGAGTTTT	NA	False	NA	3	True	ATTAAA	-15	NA	119212586	119220290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_119212874_119217549_119217674_119220115
transcript_107260.nic	chr4	+	380	2	ISM	ENSG00000145390.12	ENST00000514305.5	504	4	-185	6078	-29	-6078	5prime_fragment	FALSE	canonical	3	9	junction_1	0	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAGGGAACAAAA	NA	False	NA	NA	False	ATTAAA	-11	NA	119212557	119214133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_119212874_119214069
transcript_107262.nnic	chr4	+	375	2	NNC	ENSG00000145390.12	novel	6631	19	NA	NA	48	-6080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAACCAAAGGGAACAA	-8	True	NA	NA	False	ATTAAA	-9	NA	119213226	119214131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_119213540_119214069
transcript_107267.known	chr4	-	939	2	FSM	ENSG00000283050.3	ENST00000635323.2	1137	2	2	196	2	-3	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTAAGCTTGTATACA	NA	False	NA	NA	False	AATAAA	-16	NA	119454628	119449569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_119450126_119454245
transcript_107268.nic	chr4	-	965	2	FSM	ENSG00000283050.3	ENST00000690009.1	1175	2	18	192	1	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTAAGCTTGTATACA	NA	False	NA	NA	False	AATAAA	-16	NA	119454629	119449569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_119450151_119454245
transcript_107269.known	chr4	-	6959	21	FSM	ENSG00000138735.16	ENST00000354960.8	6959	21	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_15	12.1453694879983	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGAATACTGTGTGATT	-1	True	NA	-6	True	AATAAA	-16	NA	119628804	119494402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_119498739_119501169_119501254_119502580_119502656_119504535_119504600_119505854_119505933_119507603_119507705_119511046_119511135_119519044_119519140_119520934_119521061_119525548_119525696_119538959_119539020_119542458_119542635_119552549_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
transcript_10727.known	chr1	-	3390	6	FSM	ENSG00000143622.11	ENST00000368323.8	3390	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	14.8539557021017	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCTTTCCTTTGCTTC	1	True	NA	-23	True	AATACA	-15	NA	155911349	155897807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_107274.nic	chr4	-	1523	9	ISM	ENSG00000138735.16	ENST00000354960.8	6959	21	-17	58170	-17	-132	5prime_fragment	FALSE	canonical	3	69	junction_3	11.5947186253052	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAAGAAGAATAAAGTTA	204	False	NA	NA	False	TATAAA	-4	NA	119628821	119552572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
transcript_10728.known	chr1	-	2419	7	FSM	ENSG00000143622.11	ENST00000651853.1	2419	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117.127660648068	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGAGTAGTGGTCCCT	-12	True	NA	-93	True	GATAAA	-37	NA	155911404	155898836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155900619_155904310_155904503_155904602_155904606_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_107282.nic	chr4	+	1511	10	FSM	ENSG00000245958.7	ENST00000689183.1	1492	10	-19	0	-10	0	multi-exon	FALSE	canonical	3	21	junction_6	55.0254710941742	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	NA	False	NA	57	True	AATAAA	-22	NA	119454774	119499974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119488644_119488718_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_107290.nic	chr4	+	1438	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	-10	10	-10	0	multi-exon	FALSE	canonical	3	82	junction_7	32.714436797842	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	NA	False	NA	57	True	AATAAA	-22	NA	119454774	119499974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_107291.nnic	chr4	+	1255	9	NNC	ENSG00000245958.7	novel	1438	9	NA	NA	-10	-2	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_8	49.7379068216587	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATAAATG	NA	False	NA	55	True	AATAAA	-20	NA	119454774	119499972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499741
transcript_107294.known	chr4	+	979	8	ISM	ENSG00000245958.7	ENST00000686002.1	1438	9	35	2081	5	-389	5prime_fragment	FALSE	canonical	3	82	junction_7	30.8816040611195	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGAGATGAAAGTGAT	-20	True	NA	NA	False	NA	NA	NA	119454819	119497903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810
transcript_107298.nnic	chr4	+	1845	6	FSM	ENSG00000245958.7	ENST00000693650.1	1806	6	-39	0	-10	0	multi-exon	FALSE	canonical	3	13	junction_5	59.1831056974877	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTAGTTAACTGCTTTGT	NA	False	NA	21	True	AATAAA	-22	NA	119454774	119480935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119479825
transcript_107299.known	chr4	+	569	5	FSM	ENSG00000245958.7	ENST00000515251.2	1047	5	70	408	0	-81	multi-exon	FALSE	canonical	1	5	junction_2	80.8343212998043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATGTCAGATGCCTGG	56	False	NA	NA	False	ATTAAA	-34	NA	119454895	119461783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119455134_119457970_119458078_119460182_119460243_119460730_119460828_119461716
transcript_107313.known	chr4	-	764	3	FSM	ENSG00000164109.14	ENST00000504707.1	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	594.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGTGCTATAAAGCTAG	-36	True	NA	NA	False	NA	NA	NA	120066858	120059827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120060291_120060873_120060978_120066661
transcript_107314.known	chr4	-	5227	5	FSM	ENSG00000164109.14	ENST00000296509.11	5227	5	0	0	0	0	multi-exon	FALSE	canonical	3	1198	junction_1	78.7031606735079	3406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGAAATGGAAACTGTC	-26	True	NA	-12	True	GATAAA	-17	NA	120066848	120055622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120060291_120060873_120060978_120061974_120062096_120065671_120065819_120066661
transcript_107315.known	chr4	-	1277	4	FSM	ENSG00000164109.14	ENST00000333047.9	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	593.265164623337	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTCTTAAAACATTT	-11	True	NA	-20	True	AATAAA	-15	NA	120066833	120059436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120060291_120060873_120060978_120065671_120065819_120066661
transcript_107317.known	chr4	+	651	4	FSM	ENSG00000250938.7	ENST00000511064.6	651	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTACCCTAAAACTTAG	-18	True	NA	NA	False	AAGAAA	-44	NA	120066957	120165970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_120067002_120083284_120083332_120150542_120150622_120165489
transcript_107319.known	chr4	-	5207	16	FSM	ENSG00000138738.11	ENST00000264808.8	5207	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	15.3674981698388	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGTGTTAGCATTTTA	-7	True	NA	-1	True	AATAAA	-20	NA	120922726	120691914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120816831_120816925_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_107323.known	chr4	-	2338	15	FSM	ENSG00000138738.11	ENST00000428209.6	2338	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	12.1573442991536	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-9	True	NA	-49	True	TATAAA	-36	NA	120922858	120694822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_107328.known	chr4	-	2259	14	FSM	ENSG00000138738.11	ENST00000515109.5	2259	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	15.8834512518105	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-16	True	NA	-49	True	TATAAA	-36	NA	120922865	120694822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120695276_120710308_120710414_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_107329.nic	chr4	-	1670	7	ISM	ENSG00000138738.11	ENST00000264808.8	5207	16	-145	123996	-1	152	5prime_fragment	FALSE	canonical	3	13	junction_1	23.3428552000155	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTCTTTTGGGTTTATC	NA	False	NA	NA	False	AATAAA	-16	NA	120922871	120815910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_120816575_120816831_120816925_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_107332.known	chr4	-	1249	6	FSM	ENSG00000138738.11	ENST00000512845.5	1249	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	17.91758912354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCAACTTGTGAAAAT	24	True	NA	NA	False	NA	NA	NA	120922695	120816062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_107341.known	chr4	-	2492	4	FSM	ENSG00000138738.11	ENST00000394435.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.9608770051883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	120922870	120837344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120839275_120853417_120853541_120907473_120907558_120922515
transcript_107349.nic	chr4	-	1182	3	ISM	ENSG00000138738.11	ENST00000394435.2	2492	4	-1	15454	-1	-15454	5prime_fragment	FALSE	canonical	3	48	junction_1	17.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATATCCTTATATATCCT	NA	False	NA	NA	False	AAAAAG	-5	NA	120922871	120852798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_120853541_120907473_120907558_120922515
transcript_107350.nnic	chr4	-	629	3	NNC	ENSG00000138738.11	novel	5207	16	NA	NA	-1	4298	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTGATTTGTGTTT	NA	False	NA	NA	False	AATAAA	-30	NA	120922871	120881206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_120881396_120907473_120907558_120922515
transcript_107351.nnic	chr4	-	1583	3	NNC	ENSG00000251609.2	novel	805	3	NA	NA	-25788	990	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	37.5	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTTTATCACTAGCT	NA	False	NA	NA	False	AATAAA	-23	NA	120922871	120894503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_120895647_120907473_120907558_120922515
transcript_107352.nnic	chr4	-	1470	3	NNC	ENSG00000251609.2	novel	805	3	NA	NA	-25788	877	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	37.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGATACTGTTTTCCTC	NA	False	NA	NA	False	AATAAA	-20	NA	120922871	120894616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_120895647_120907473_120907558_120922515
transcript_107353.known	chr4	-	2902	4	FSM	ENSG00000173376.14	ENST00000379692.9	2902	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	5.09901951359278	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTGGTGTATTCAAT	-4	True	NA	5	True	ATTAAA	-36	NA	121072535	121035612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121037658_121039929_121040055_121045649_121045839_121071992
transcript_107355.known	chr4	-	2339	6	FSM	ENSG00000186867.11	ENST00000394427.3	2339	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	3.26190128606002	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTGCTAGATTGAAT	-4	True	NA	NA	False	NA	NA	NA	121381018	121328641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121329715_121330425_121330524_121332820_121333057_121336806_121336869_121340451_121340611_121380307
transcript_10736.known	chr1	-	2961	14	FSM	ENSG00000132680.11	ENST00000368321.8	2961	14	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	36.2373830318096	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-5	True	NA	-8	True	AATAAA	-14	NA	155934413	155913044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_107362.known	chr4	-	1638	13	FSM	ENSG00000164111.15	ENST00000296511.10	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	2152	junction_4	199.186871360093	3954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTTTTTAAGCTAATAA	-7	True	NA	43	True	ATTAAA	-17	NA	121696980	121667945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_107363.known	chr4	-	1606	13	FSM	ENSG00000164111.15	ENST00000506395.5	1606	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	721.298867013914	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAAATAAACATTTCTG	7	True	NA	-38	True	ACTAAA	-41	NA	121696966	121668026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678351_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_107373.known	chr4	+	1529	13	FSM	ENSG00000123737.13	ENST00000379663.7	1529	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_10	188.49320279522	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGAACCCTGGGTATT	-37	True	NA	16	True	ATTAAA	-17	NA	121801319	121816909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816143_121816195_121816368_121816448_121816771
transcript_107379.known	chr4	+	1587	12	FSM	ENSG00000123737.13	ENST00000243498.10	1587	12	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_10	84.5920692607657	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTCTGTTAATTTGC	-34	True	NA	16	True	AATAAA	-13	NA	121801322	121817021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816368_121816448_121816771
transcript_107404.nic	chr4	+	938	8	ISM	ENSG00000123737.13	ENST00000509980.5	1317	11	-15	3743	-15	0	5prime_fragment	FALSE	canonical	3	567	junction_4	56.9001990599438	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAGTAAGGTAAGTAAC	NA	False	NA	NA	False	NA	NA	NA	121801302	121811660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582
transcript_107406.known	chr4	-	2748	8	FSM	ENSG00000145386.11	ENST00000274026.10	2748	8	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_3	44.6665651334007	1341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGGATTCTTGTCT	7	True	NA	-10	True	AATAAA	-20	NA	121823883	121816443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121817687_121818043_121818178_121818799_121818914_121819371_121819580_121820541_121820766_121820978_121821092_121822402_121822647_121823415
transcript_107413.known	chr4	+	3882	11	FSM	ENSG00000123737.13	ENST00000513654.5	3882	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	201.609548384991	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTCTGTTAATTTGC	-34	True	NA	16	True	AATAAA	-13	NA	121801322	121817021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810074_121811582_121811672_121813233_121813381_121813865_121816448_121816771
transcript_107417.known	chr4	-	3840	19	FSM	ENSG00000138686.10	ENST00000264499.9	3840	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	78.7098320054171	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACACATAAGAAAACGGAG	-9	True	NA	NA	False	NA	NA	NA	121870474	121824328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121825994_121828145_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_107421.known	chr4	-	2570	18	FSM	ENSG00000138686.10	ENST00000506636.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	79.431718625971	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTGTCAATTTAT	15	True	NA	-2	True	AATAAA	-13	NA	121870450	121827726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_107433.known	chr4	-	725	4	FSM	ENSG00000138686.10	ENST00000502444.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	22.6028513442196	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGACAACTTGGTTC	-22	True	NA	NA	False	TTTAAA	-24	NA	121870487	121861293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121861680_121863216_121863280_121867980_121868047_121870277
transcript_107441.known	chr4	-	1385	3	FSM	ENSG00000224786.3	ENST00000641807.2	1455	3	0	70	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAGAGAAGTTTTAAAAA	40	False	NA	NA	False	ACTAAA	-1	NA	122732474	122729580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122730636_122732051_122732194_122732286
transcript_107442.known	chr4	-	1253	3	FSM	ENSG00000224786.3	ENST00000641995.1	1253	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAGAGAAGTTTTAAAAA	40	False	NA	NA	False	ACTAAA	-1	NA	122732474	122729580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122730636_122732051_122732194_122732418
transcript_107445.known	chr4	-	2223	2	FSM	ENSG00000224786.3	ENST00000641800.1	2223	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACATAAAGTATTAAATAGA	-10	True	NA	NA	False	NA	NA	NA	122732461	122730145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122732194_122732286
transcript_107447.known	chr4	+	3238	2	FSM	ENSG00000181004.10	ENST00000314218.8	3238	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGATATGTGGTGTTA	20	True	NA	3	True	AATAAA	-16	NA	122732703	122744939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_122732885_122741882
transcript_107448.known	chr4	-	1227	5	FSM	ENSG00000170917.14	ENST00000304430.10	1227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.204117097743	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGTTATTTTTCTT	-16	True	NA	65	True	TATAAA	-20	NA	122922597	122892576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922334
transcript_10745.known	chr1	-	911	6	FSM	ENSG00000132680.11	ENST00000466713.1	911	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	16.0549057923116	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCCCAGCTACTTGGGA	10	True	NA	NA	False	NA	NA	NA	155934398	155926470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_107450.known	chr4	-	1065	5	FSM	ENSG00000170917.14	ENST00000339154.6	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	25.3968501984006	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCTAGGTAAGCTT	-14	True	NA	-2	True	AATAAA	-19	NA	122922968	122892643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922800
transcript_107463.nic	chr4	-	592	3	ISM	ENSG00000170917.14	ENST00000304430.10	1227	5	-46	19968	-46	-15019	5prime_fragment	FALSE	canonical	0	0	junction_2	53.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	311	False	NA	NA	False	AATAAA	-24	NA	122922643	122912544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_122912624_122917500_122917705_122922334
transcript_107465.nic	chr4	-	859	3	ISM	ENSG00000170917.14	ENST00000339154.6	1065	5	-408	19901	-408	-15019	5prime_fragment	FALSE	canonical	3	53	junction_2	27	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	NA	False	NA	NA	False	AATAAA	-24	NA	122923376	122912544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_122912624_122917500_122917705_122922800
transcript_107469.known	chr4	+	2492	15	FSM	ENSG00000145375.9	ENST00000422835.2	2492	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_14	11.4920114223147	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	4	True	NA	NA	False	NA	NA	NA	122923100	123102293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123102183
transcript_10747.nic	chr1	-	1343	5	NIC	ENSG00000132680.11	novel	911	6	NA	NA	-19	134	intron_retention	FALSE	canonical	3	200	junction_2	9.53939201416946	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGCCAAGT	8494	False	NA	NA	False	NA	NA	NA	155934432	155926336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_107473.nic	chr4	+	1278	5	ISM	ENSG00000145375.9	ENST00000422835.2	2492	15	-23	167489	0	-585	5prime_fragment	FALSE	canonical	3	27	junction_1	10.8021988502342	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGATTGCTCATCCTC	-19	True	NA	NA	False	ATTAAA	-17	NA	122923077	122934804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096
transcript_107475.nic	chr4	+	859	3	ISM	ENSG00000145375.9	ENST00000422835.2	2492	15	-23	172748	0	-5844	5prime_fragment	FALSE	canonical	3	27	junction_1	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTTCTGGGCATGGTG	-19	True	NA	NA	False	AATACA	-6	NA	122923077	122929545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_122923306_122927633_122927759_122929039
transcript_107477.known	chr4	+	849	2	FSM	ENSG00000164056.11	ENST00000515726.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCCTGGCCGGTGGCG	2	True	NA	NA	False	NA	NA	NA	123396810	123398337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123396933_123397610
transcript_107478.known	chr4	+	2352	2	FSM	ENSG00000164056.11	ENST00000622283.1	2352	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	506	False	NA	NA	False	AATATA	-19	NA	123398385	123403760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123398514_123401536
transcript_107479.known	chr4	+	2504	2	FSM	ENSG00000164056.11	ENST00000394339.2	2504	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTCGATTTCTTCAT	1035	False	NA	NA	False	AATATA	-14	NA	123399509	123403755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123399795_123401536
transcript_107480.known	chr4	+	2348	2	FSM	ENSG00000164056.11	ENST00000339241.1	2348	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTCTCGATTTCTT	-8	True	NA	NA	False	AATATA	-11	NA	123396800	123403752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123396933_123401536
transcript_107482.known	chr4	+	825	7	FSM	ENSG00000249464.7	ENST00000670311.2	1321	7	178	318	-28	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCCAAATTGCTTACCA	177	False	NA	NA	False	NA	NA	NA	123650215	123930411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123650333_123652790_123652903_123661752_123661834_123829094_123829188_123924096_123924201_123925183_123925338_123930247
transcript_107483.known	chr4	+	1012	6	FSM	ENSG00000249464.7	ENST00000511919.6	1347	6	335	0	8	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTAGAATCTTTTTTTT	25	False	NA	NA	False	AATAAA	-24	NA	123650298	123930785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123650333_123652790_123652903_123661752_123661834_123829094_123829188_123925183_123925338_123930247
transcript_107487.nnic	chr4	-	1740	3	NNC	ENSG00000151458.12	novel	8798	5	NA	NA	-35	-40300	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	24	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGCTCTTCACTGAT	NA	False	NA	NA	False	AATAAA	-32	NA	124712767	124707658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_124707814_124709999_124711275_124712457
transcript_107488.known	chr4	-	8798	5	FSM	ENSG00000151458.12	ENST00000504087.6	8798	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	8.97217922246318	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTCACTTCTTCATGA	-1	True	NA	NA	False	AATAAA	-27	NA	124712732	124664047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_124667515_124668983_124672535_124678675_124678906_124709999_124711275_124712457
transcript_107489.nic	chr4	-	1977	2	ISM	ENSG00000151458.12	ENST00000515641.1	4212	4	41870	58	41870	-58	3prime_fragment	FALSE	canonical	3	54	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATGTGATCTCTGCA	NA	False	NA	NA	False	AAAACA	-8	NA	124670862	124667416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_124667515_124668983
transcript_107490.nic	chr4	-	1067	2	ISM	ENSG00000151458.12	ENST00000504087.6	8798	5	-35	46470	-35	-43159	5prime_fragment	FALSE	canonical	3	53	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTATGACTAATCCTTG	NA	False	NA	NA	False	GATAAA	-4	NA	124712767	124710517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_124711275_124712457
transcript_107492.known	chr4	+	13208	16	FSM	ENSG00000164066.13	ENST00000335251.11	13208	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	9.37988391304616	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGCCTTTTTCATG	10	True	NA	14	True	AATAAA	-24	NA	127632956	127726737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127633181_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127687677_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
transcript_107499.known	chr4	+	737	2	FSM	ENSG00000164066.13	ENST00000504491.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGTCAGGTACTCATTG	314	False	NA	NA	False	NA	NA	NA	127623270	127644036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127623492_127643520
transcript_107500.nic	chr4	+	428	2	ISM	ENSG00000164066.13	ENST00000503952.5	3006	17	-41	72787	-32	-344	5prime_fragment	FALSE	canonical	3	27	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAACCCAAACTCAAGCA	9968	False	NA	-26	True	AAAAAG	-1	NA	127632924	127643692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127633181_127643520
transcript_107501.nnic	chr4	+	377	2	NNC	ENSG00000164066.13	novel	13208	16	NA	NA	-25	-344	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAACCCAAACTCAAGCA	-15	True	NA	-26	True	AAAAAG	-1	NA	127632931	127643692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_127633137_127643520
transcript_107504.known	chr4	+	10608	19	FSM	ENSG00000164070.12	ENST00000296464.9	10608	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	2.96741563579414	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACACCTGAGGTTTA	16	True	NA	NA	False	AATAAA	-29	NA	127782321	127840733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127782658_127794076_127794135_127795767_127795909_127798586_127798710_127801137_127801238_127801784_127801919_127803628_127803874_127804010_127804088_127805072_127805225_127805686_127805794_127807995_127808130_127811436_127811637_127818324_127818421_127820427_127820566_127822768_127822895_127823516_127823625_127827304_127827425_127830637_127830800_127832682
transcript_107507.known	chr4	-	481	1	FSM	ENSG00000244021.4	ENST00000491435.2	481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGTGTTAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	127813200	127812719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127812700_127813200
transcript_10751.nic	chr1	-	653	2	ISM	ENSG00000132680.11	ENST00000491599.1	773	3	-32	1021	-19	-1021	5prime_fragment	FALSE	canonical	3	224	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTTTGTAATCCTGTA	8494	False	NA	NA	False	NA	NA	NA	155934432	155933293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_155933850_155934335
transcript_107510.known	chr4	+	3838	16	FSM	ENSG00000142731.11	ENST00000270861.10	3838	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	28.0803608713753	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTATATTTTAATGAA	-19	True	NA	NA	False	AATACA	-23	NA	127880892	127899224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886729_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_10752.known	chr1	-	4499	13	FSM	ENSG00000132680.11	ENST00000368320.7	4499	13	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	34.2012020581473	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	9	True	NA	-8	True	AATAAA	-14	NA	155934399	155913044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_107525.known	chr4	+	5753	13	FSM	ENSG00000164074.16	ENST00000645843.2	5753	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	20.9138444311152	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCTCAATGTTGCTC	-2	True	NA	NA	False	AATAAA	-16	NA	127965405	128039953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
transcript_107531.nic	chr4	+	2330	12	ISM	ENSG00000164074.16	ENST00000645843.2	5753	13	-128	8640	-28	0	5prime_fragment	FALSE	non_canonical	0	0	junction_6	21.7426723668663	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGCCGGGCATAGGTG	-13	True	NA	NA	False	AGTAAA	-21	NA	127965277	128031313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509
transcript_107537.nic	chr4	+	2905	12	NIC	ENSG00000164074.16	novel	5753	13	NA	NA	14	843	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_5	26.0882165224516	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	-9	True	NA	NA	False	NA	NA	NA	127965328	128037129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_127965607_127982938_127983048_127984338_127984424_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
transcript_107540.known	chr4	-	4422	12	FSM	ENSG00000164073.11	ENST00000641686.2	4422	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	23.9234315789436	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAGCTTTAAAACTTTA	-14	True	NA	-19	True	AATAAA	-22	NA	127965173	127917804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107541.known	chr4	-	4374	12	FSM	ENSG00000164073.11	ENST00000641178.1	4374	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	31.0374340764437	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAGACTTATTTGTAA	NA	False	NA	-103	True	AATAGA	-42	NA	127966034	127917888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965896
transcript_107548.known	chr4	+	1493	11	FSM	ENSG00000164074.16	ENST00000611882.1	1493	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	27.1447969231674	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCACAGAGTTACTTTT	41	False	NA	NA	False	NA	NA	NA	127965505	128030805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509
transcript_107549.known	chr4	-	4448	11	FSM	ENSG00000164073.11	ENST00000641186.1	4448	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	33.7942302767795	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTACCTTAAGCTTT	629	False	NA	-28	True	AATAAA	-13	NA	127965322	127917813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107551.known	chr4	-	1823	11	FSM	ENSG00000164073.11	ENST00000641742.1	1823	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	30.5122926047847	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAAGAATTAGCCATAG	-20	True	NA	47	True	ATTAAA	-30	NA	127965179	127920264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107553.known	chr4	-	4261	11	FSM	ENSG00000164073.11	ENST00000641025.1	4261	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	27.9572888528198	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTACATTGTGAATGTT	-12	True	NA	-74	True	NA	NA	NA	127965171	127917859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107555.known	chr4	-	2303	11	FSM	ENSG00000164073.11	ENST00000642042.1	2303	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	24.0875486507033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGGAAACTACTTGCT	-21	True	NA	NA	False	AATAAA	-12	NA	127965180	127920617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107566.known	chr4	-	4199	10	FSM	ENSG00000164073.11	ENST00000641690.1	4199	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	34.3025752191678	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATTATTTTGCATATG	-14	True	NA	-41	True	NA	NA	NA	127965173	127917826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107570.known	chr4	-	4860	10	FSM	ENSG00000164073.11	ENST00000641482.1	4860	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	28.4661375612204	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGAGAAGAAATTCT	11	True	NA	NA	False	GATAAA	-35	NA	127965148	127917924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107571.known	chr4	-	4132	10	FSM	ENSG00000164073.11	ENST00000642034.1	4132	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	37.9525369603719	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTTTACATTGTGAATG	1	True	NA	-76	True	NA	NA	NA	127965158	127917861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107582.known	chr4	-	948	8	FSM	ENSG00000164073.11	ENST00000641743.1	948	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	19.5207895457585	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATATAGATGTTATTGA	11	True	NA	NA	False	NA	NA	NA	127965148	127932914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107585.nnic	chr4	+	1777	7	NNC	ENSG00000164074.16	novel	2177	11	NA	NA	-28	1580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	27.272798821455	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGGAAATAGGAT	-13	True	NA	NA	False	AAAAAG	-27	NA	127965277	128010537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009193_128009549
transcript_107588.known	chr4	-	1422	7	FSM	ENSG00000164073.11	ENST00000641243.1	1422	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	32.390413533774	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTTGACAACTTGGT	-12	True	NA	NA	False	ATTAAA	-21	NA	127965171	127932318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107589.nic	chr4	-	934	7	ISM	ENSG00000164073.11	ENST00000641743.1	948	8	-109	5812	-6	353	5prime_fragment	FALSE	canonical	3	64	junction_1	21.0607586652417	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTGTTTGGTATTTA	694	False	NA	NA	False	AATATA	-25	NA	127965257	127938726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107594.nic	chr4	+	2139	6	ISM	ENSG00000164074.16	ENST00000398965.5	2177	11	-28	20748	-28	1585	5prime_fragment	FALSE	canonical	3	58	junction_4	8.97552226892675	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAATAGGATATAAA	-13	True	NA	NA	False	AAAAAG	-32	NA	127965277	128010542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106
transcript_107598.nic	chr4	-	734	6	ISM	ENSG00000164073.11	ENST00000641243.1	1422	7	-39	6416	7	345	5prime_fragment	FALSE	canonical	3	21	junction_1	35.4773166967289	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATGATTCTGTTTGTTT	10	True	NA	NA	False	AATATA	-17	NA	127965210	127938734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_1076.known	chr1	+	719	7	FSM	ENSG00000069424.16	ENST00000663169.1	719	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	21.1896201004171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCCCCTGATCACGTC	285	False	NA	6	True	ATTAAA	-18	NA	6026271	6086366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6086157
transcript_107600.nic	chr4	+	567	4	ISM	ENSG00000164074.16	ENST00000513371.1	569	6	-31	24428	-31	-24428	5prime_fragment	FALSE	canonical	1	1	junction_1	38.6551707048646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTATGGATTTTTCAT	-22	True	NA	NA	False	AATAAA	-14	NA	127965442	127984529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127965607_127965953_127966057_127982938_127983048_127984338
transcript_107601.known	chr4	-	886	4	FSM	ENSG00000164073.11	ENST00000641140.1	886	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	13.0979218029257	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACAAAAATAGATCC	1	True	NA	NA	False	NA	NA	NA	127965219	127943390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127943993_127949803_127949848_127957500_127957593_127965071
transcript_107602.nic	chr4	-	826	4	ISM	ENSG00000164073.11	ENST00000641134.1	1327	7	-32	11021	0	0	5prime_fragment	FALSE	canonical	3	9	junction_3	51.2315007262784	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACAAAAATAGATCC	-33	True	NA	NA	False	NA	NA	NA	127965984	127943390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_127943993_127949803_127949848_127957500_127957593_127965896
transcript_107604.nic	chr4	+	629	3	ISM	ENSG00000164074.16	ENST00000611882.1	1493	11	-228	46276	-28	-24428	5prime_fragment	FALSE	canonical	3	71	junction_1	6	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTATGGATTTTTCAT	-13	True	NA	NA	False	AATAAA	-14	NA	127965277	127984529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127965607_127982938_127983048_127984338
transcript_107606.known	chr4	-	1731	11	FSM	ENSG00000164073.11	ENST00000641658.1	1731	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	36.0833756735702	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTAAAATAATATACAGT	2	True	NA	10	True	AATAAA	-37	NA	127965949	127920301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965896
transcript_107610.known	chr4	+	3105	12	FSM	ENSG00000138709.19	ENST00000512292.5	3105	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_11	45.098789633939	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	-19	True	NA	-21	True	ATTAAA	-22	NA	128061285	128123869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
transcript_107623.known	chr4	+	2151	10	FSM	ENSG00000138709.19	ENST00000394288.7	2151	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	19.9115327336313	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	30	False	NA	12	True	AATAAA	-19	NA	128061334	128108901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_107627.known	chr4	+	2707	9	FSM	ENSG00000138709.19	ENST00000432347.6	2707	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	20.6700266085944	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	1	True	NA	12	True	AATAAA	-19	NA	128061347	128108901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138
transcript_107640.nic	chr4	+	363	4	ISM	ENSG00000138709.19	ENST00000394288.7	2151	10	-123	31060	-74	-31013	5prime_fragment	FALSE	canonical	3	102	junction_1	26.4112770527204	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGGTTGAAAAGAG	360	False	NA	NA	False	AATAAA	-25	NA	128061211	128077841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787
transcript_107644.known	chr4	-	3785	3	FSM	ENSG00000164040.18	ENST00000520121.6	3785	3	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_2	37	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTGAATGTTTCTCA	-18	True	NA	-5	True	AATAAA	-26	NA	128288829	128269241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_128271414_128272361_128272518_128287372
transcript_107649.known	chr4	-	1144	3	FSM	ENSG00000164040.18	ENST00000512483.5	1144	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	305.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTAATTGTGCCTTA	-15	True	NA	NA	False	NA	NA	NA	128288203	128270611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_128271414_128272361_128272518_128288017
transcript_107651.nnic	chr4	-	724	2	NNC	ENSG00000164040.18	novel	2858	2	NA	NA	-5347	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	1671	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTGAGTTGGACTTTA	9780	False	NA	-23	True	AATAAA	-21	NA	128278408	128270139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_128270850_128278394
transcript_107654.known	chr4	-	1623	2	FSM	ENSG00000248187.1	ENST00000514265.1	1623	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACTATCAGATAATAAAT	11	False	NA	NA	False	NA	NA	NA	128570531	128567971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_128569288_128570224
transcript_107655.known	chr4	-	2987	21	FSM	ENSG00000151466.12	ENST00000281142.10	2987	21	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	10.2248471871222	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGTCATGTATTTTA	929	False	129093561	-13	True	AATAAA	-18	NA	129093539	128883992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_128884540_128888678_128888775_128891058_128891138_128936654_128936852_128942995_128943189_128946006_128946153_128948495_128948571_128952768_128952841_128957025_128957125_128959599_128959778_128965226_128965319_128970377_128970469_128992166_128992238_128997873_128997940_128999671_128999795_129003740_129003877_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_107660.nic	chr4	-	1585	13	ISM	ENSG00000151466.12	ENST00000281142.10	2987	21	-78	73108	-17	-72711	5prime_fragment	FALSE	canonical	3	48	junction_2	11.0441035046862	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGACATAGAGAAAAT	-19	True	NA	NA	False	NA	NA	NA	129093617	128957100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_128957125_128959599_128959778_128965226_128965319_128970377_128970469_128992166_128992238_128997873_128997940_128999671_128999795_129003740_129003877_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_107664.known	chr4	-	2096	6	FSM	ENSG00000151466.12	ENST00000506368.5	2096	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	23.2980685894775	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTAGTTTTTCTCATTT	1091	False	NA	NA	False	AATAAA	-18	NA	129093377	129036594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_107669.known	chr4	-	1696	5	FSM	ENSG00000151466.12	ENST00000511426.5	1696	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	22.6646751576104	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCAGAATCTGATTG	923	False	129093561	NA	False	AATAAA	-25	NA	129093545	129039192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_107670.known	chr4	-	1604	5	FSM	ENSG00000151466.12	ENST00000503401.1	1604	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	32.7146756059112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTATAAATAAAGAATAAG	-2	True	NA	NA	False	AGTAAA	-23	NA	129093563	129039229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093142
transcript_107675.nnic	chr4	-	1386	3	NNC	ENSG00000151466.12	novel	3311	23	NA	NA	-17	-33278	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAATAAGAAAATATGAACAA	-19	True	NA	NA	False	NA	NA	NA	129093617	129072507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_129073278_129082305_129082374_129093069
transcript_107679.known	chr4	+	3000	11	FSM	ENSG00000077684.16	ENST00000512960.5	3000	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	213.918582643023	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCAGAAACCCATTAAT	13	False	NA	NA	False	NA	NA	NA	128809918	128872334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128810292_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_107681.known	chr4	+	5644	11	FSM	ENSG00000077684.16	ENST00000610919.4	5644	11	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	157.677645847469	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	-12	True	NA	13	True	AATAAA	-22	NA	128811269	128875224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_107686.known	chr4	+	4012	9	FSM	ENSG00000077684.16	ENST00000413543.6	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	242.895939653177	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTTTCTCAAGTAAG	6	True	NA	8	True	AATAAA	-19	NA	128811325	128864630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
transcript_107692.known	chr4	+	564	5	FSM	ENSG00000077684.16	ENST00000510308.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	232.551607175698	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACATGGATGCTGCATG	6	True	NA	NA	False	NA	NA	NA	128811287	128849112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979
transcript_107697.known	chr4	+	6170	6	FSM	ENSG00000151470.13	ENST00000281146.9	6170	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	15.957443404255	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTGAATTAGTTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	129093316	129116640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_129094029_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_107698.known	chr4	+	5513	6	FSM	ENSG00000151470.13	ENST00000425929.6	5513	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	4.53431361950185	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTTTGAATTAGTT	11	True	NA	NA	False	AATAAA	-19	NA	129096151	129116637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_107718.nnic	chr4	-	1295	11	NNC	ENSG00000250241.7	novel	1205	8	NA	NA	-1	428	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.14603739331958	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAACTAAATTTTGC	-5	True	NA	NA	False	AAAAAG	-10	NA	133149148	133109839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_133110100_133110785_133110911_133115495_133115647_133116368_133116512_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_107728.known	chr4	-	3339	9	FSM	ENSG00000250241.7	ENST00000671428.1	3339	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	7.54569413639329	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATACACACTAATATGT	1852	False	NA	NA	False	NA	NA	NA	133149124	133093348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140657_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_10773.known	chr1	-	895	6	FSM	ENSG00000163479.14	ENST00000480567.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	730.650778416064	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCCTTGGTTCCA	77	False	NA	NA	False	NA	NA	NA	156020889	156009359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020726
transcript_107732.nnic	chr4	-	1001	9	NNC	ENSG00000250241.7	novel	1205	8	NA	NA	-1	428	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.47053717304871	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAACTAAATTTTGC	-5	True	NA	NA	False	AAAAAG	-10	NA	133149148	133109839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_133110100_133110785_133110911_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_107737.known	chr4	-	1205	8	FSM	ENSG00000250241.7	ENST00000659189.1	1205	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.07106781186548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGACAAAGAGGCCAAAAC	1882	False	NA	NA	False	NA	NA	NA	133149094	133110267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_133110911_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_107741.known	chr4	-	8044	9	FSM	ENSG00000250241.7	ENST00000667505.1	8044	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5.73230974389905	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTTCTATTTTCTGG	-4	True	NA	NA	False	TTTAAA	-13	NA	133149147	133088669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_107746.nnic	chr4	+	1999	5	NNC	ENSG00000138650.9	novel	8510	5	NA	NA	-5	-3113	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.1573396113771	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATATTTTTTCTACT	-4	True	NA	28	True	ATTAAA	-25	NA	133149288	133191587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_133149369_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_107747.nnic	chr4	+	1178	5	NNC	ENSG00000138650.9	novel	8510	5	NA	NA	-5	-3934	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.1573396113771	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATAATTTTCCTAAA	-4	True	NA	11	True	AATAAA	-19	NA	133149288	133190766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_133149369_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_107749.known	chr4	+	8510	5	FSM	ENSG00000138650.9	ENST00000264360.7	8510	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	7.49583217528247	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGCTGATTTAGTAAT	1	True	NA	26	True	AATAAA	-36	NA	133149293	133194700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_133152772_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_107752.known	chr4	+	968	3	FSM	ENSG00000138650.9	ENST00000511112.2	968	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	56.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTACTAACTTTAGTGAA	2326	False	NA	25	True	AATAAA	-21	NA	133154892	133208606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_133155024_133162976_133163283_133208075
transcript_107755.nnic	chr4	-	963	3	NNC	ENSG00000286467.1	novel	1460	2	NA	NA	-4113	-403	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	72.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGGGCGTTTCTTTAT	1064	False	NA	NA	False	NA	NA	NA	133267228	133261424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_133261995_133262628_133262669_133266875
transcript_107757.nnic	chr4	-	734	3	NNC	ENSG00000286467.1	novel	1460	2	NA	NA	-4113	-632	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	72.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGTTTAATTTTATGTA	1064	False	NA	-89	True	NA	NA	NA	133267228	133261653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_133261995_133262628_133262669_133266875
transcript_107758.known	chr4	-	1460	2	FSM	ENSG00000286467.1	ENST00000669848.1	1460	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATGATCTTTGTGTAA	0	True	NA	NA	False	TATAAA	-12	NA	133263115	133261021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_133261995_133262628
transcript_107762.known	chr4	-	1444	1	FSM	ENSG00000261166.1	ENST00000569694.1	1444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTGTCTATATTGCT	7	True	NA	NA	False	ATTAAA	-18	NA	136099240	136097796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_136097800_136099200
transcript_107764.known	chr4	-	875	4	FSM	ENSG00000251567.5	ENST00000513332.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTGGTCTATATTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	136281294	136118674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_136118982_136119849_136120139_136261408_136261451_136281057
transcript_107765.known	chr4	+	415	1	FSM	ENSG00000213448.3	ENST00000463671.1	415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATGGTGAAAACACC	29	False	NA	NA	False	NA	NA	NA	137448086	137448501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_137448100_137448500
transcript_107767.known	chr4	-	5102	4	FSM	ENSG00000189184.12	ENST00000412923.6	5102	4	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	31.6262900483478	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	26	True	NA	-17	True	AATAAA	-18	NA	137532459	137519702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601
transcript_107768.known	chr4	-	819	4	FSM	ENSG00000189184.12	ENST00000611581.1	819	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	114.845790325791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTCTGAATGCAGTGAG	-9	True	NA	NA	False	NA	NA	NA	137532494	137521372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_137521702_137528477_137528642_137528731_137528818_137532254
transcript_107772.known	chr4	+	764	2	FSM	ENSG00000250033.5	ENST00000514752.1	764	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGGCTGACTTTTTTTC	56	False	NA	NA	False	NA	NA	NA	138105718	138169407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_138105792_138168716
transcript_107773.known	chr4	-	9645	12	FSM	ENSG00000151012.13	ENST00000280612.9	9645	12	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_3	5.51182050589968	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCGTCATGTTTTGC	-3	True	NA	NA	False	AATAAA	-20	NA	138242349	138164096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_138172018_138179216_138179395_138180640_138180791_138182296_138182394_138183201_138183306_138185120_138185245_138214584_138214630_138219265_138219366_138223198_138223325_138232266_138232383_138236324_138236452_138241792
transcript_107777.nic	chr4	-	1838	6	ISM	ENSG00000151012.13	ENST00000280612.9	9645	12	-99	49820	-99	-42073	5prime_fragment	FALSE	canonical	3	30	junction_1	5.88557558782486	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGAAAATGTAGGAACTG	5	True	NA	NA	False	CATAAA	-41	NA	138242448	138213916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_138214630_138219265_138219366_138223198_138223325_138232266_138232383_138236324_138236452_138241792
transcript_107786.known	chr4	-	1965	7	FSM	ENSG00000109381.21	ENST00000510408.5	1965	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	47.8553956089477	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCACTACGATATCAAG	6	True	NA	NA	False	AAAAAG	-18	NA	139084325	139058718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139084132
transcript_107787.known	chr4	-	3036	7	FSM	ENSG00000109381.21	ENST00000358635.7	3036	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	49.2803769826851	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTCTGGTGATATT	NA	False	NA	2	True	AATATA	-21	NA	139084496	139057854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139084132
transcript_107793.known	chr4	-	4012	10	FSM	ENSG00000109381.21	ENST00000394235.6	4012	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	37.2024823279042	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAAATTCTGTCTCCTTT	-7	True	NA	47	True	AAGAAA	-35	NA	139177218	139057219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072004_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
transcript_107795.nic	chr4	-	988	6	ISM	ENSG00000109381.21	ENST00000686138.1	4003	10	40	14602	21	-5857	5prime_fragment	FALSE	canonical	3	89	junction_1	8.76356092008266	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	728	False	NA	NA	False	AAAAAG	-7	NA	139177178	139071866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_139072040_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
transcript_107797.known	chr4	-	2219	4	FSM	ENSG00000109381.21	ENST00000514606.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	27.7968823191858	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGACATTGAACACATTCA	-7	True	NA	NA	False	AAGAAA	-44	NA	139084338	139066009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139067771_139071865_139072004_139073453_139073568_139084132
transcript_107799.nic	chr4	-	554	3	ISM	ENSG00000109381.21	ENST00000514606.1	2219	4	-97	5857	61	-5857	5prime_fragment	FALSE	canonical	3	63	junction_2	18.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	NA	False	NA	NA	False	AAAAAG	-7	NA	139084435	139071866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_139072004_139073453_139073568_139084132
transcript_107802.known	chr4	-	1434	3	FSM	ENSG00000109381.21	ENST00000511006.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTGAACCCGAGAGGC	-7	True	NA	NA	False	NA	NA	NA	139177218	139136770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139137868_139139412_139139498_139176966
transcript_107813.known	chr4	-	761	6	FSM	ENSG00000109390.13	ENST00000394228.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	1537.03681153055	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	NA	False	NA	2	True	AATAAA	-40	NA	139302551	139289916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139296331_139296368_139302415
transcript_107814.known	chr4	-	1257	6	FSM	ENSG00000109390.13	ENST00000544855.5	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	1536.54724626352	2479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	1312	False	NA	2	True	AATAAA	-40	NA	139301210	139289916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139300601
transcript_107815.known	chr4	-	696	6	FSM	ENSG00000109390.13	ENST00000394223.2	696	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	1535.81241041997	2609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTGTGACAACTTGTA	10	True	NA	-12	True	AATAAA	-36	NA	139302477	139289930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139302415
transcript_107823.known	chr4	-	1198	5	FSM	ENSG00000109390.13	ENST00000539002.5	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1338.35206504118	2624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	1312	False	NA	2	True	AATAAA	-40	NA	139301210	139289916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300601
transcript_107826.known	chr4	-	809	5	FSM	ENSG00000109390.13	ENST00000505036.5	809	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1360.84394770304	5212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAGCATATTGTGACA	1318	False	NA	-19	True	AATAAA	-29	NA	139301204	139289937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300963
transcript_107827.known	chr4	-	682	5	FSM	ENSG00000109390.13	ENST00000503453.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1361.70903646851	4586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	-58	True	NA	-34	True	AATAAA	-14	NA	139301420	139289952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139301291
transcript_107829.known	chr4	-	664	5	FSM	ENSG00000109390.13	ENST00000394225.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	1292.0734063899	5369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	-4	True	NA	-34	True	AATAAA	-14	NA	139302526	139289952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
transcript_107835.known	chr4	-	1224	4	FSM	ENSG00000137463.5	ENST00000398955.2	1224	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	4.96655480858378	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTCTACTTTTTTC	-15	True	NA	NA	False	AATAAA	-13	NA	139280225	139266164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139267042_139268671_139268766_139275288_139275393_139280076
transcript_107847.known	chr4	-	627	3	FSM	ENSG00000273247.6	ENST00000609359.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATGGTACTGGCATTA	-1	True	NA	NA	False	NA	NA	NA	139454034	139413823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139414025_139415936_139416013_139453684
transcript_107852.known	chr4	+	4248	2	FSM	ENSG00000172007.7	ENST00000305626.6	4248	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGTCCTTGAAGAACT	4	True	NA	NA	False	NA	NA	NA	139454120	139476609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139454445_139472685
transcript_107855.nnic	chr4	-	1386	2	NIC	ENSG00000273247.6	novel	2510	3	NA	NA	-37	855	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGGCAAAAGATCCAAACA	41	False	NA	NA	False	NA	NA	NA	139453992	139412946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_139414025_139453684
transcript_107856.nnic	chr4	-	1070	2	NIC	ENSG00000273247.6	novel	2510	3	NA	NA	-37	539	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATAATCTAAAAAGTGGG	41	False	NA	NA	False	AAAACA	-32	NA	139453992	139413262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_139414025_139453684
transcript_107857.nnic	chr4	-	544	2	NIC	ENSG00000273247.6	novel	627	3	NA	NA	-37	13	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCACATAGACCACCAAT	41	False	NA	NA	False	ATTAAA	-14	NA	139453992	139413788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_139414025_139453684
transcript_107859.nnic	chr4	-	1537	2	FSM	ENSG00000273247.6	ENST00000692258.1	1284	2	-255	2	-11	-2	multi-exon	FALSE	canonical	3	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGGTGTGGTGGCTCA	67	False	NA	NA	False	ATTAAA	-13	NA	139453966	139451676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139452932_139453684
transcript_10786.known	chr1	-	1040	5	FSM	ENSG00000163479.14	ENST00000480176.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	730.57699799542	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGGATACCCAGTGTC	-5	True	NA	-96	True	AATGAA	-13	NA	156020935	156009128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156018131_156018369_156020012_156020168_156020887
transcript_107860.known	chr4	-	6808	8	FSM	ENSG00000145391.14	ENST00000274031.8	6808	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	6.88387645894672	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCATTGTCTTCCTTTG	3	True	NA	-5	True	ATTAAA	-16	NA	139556219	139506037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139511844_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
transcript_107861.known	chr4	-	1602	8	FSM	ENSG00000145391.14	ENST00000506866.6	1602	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.25599640167146	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAACCCAGGTTATTAG	1161	False	139556252	NA	False	AATAAA	-15	NA	139556238	139495940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139496522_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
transcript_107867.known	chr4	-	1590	3	FSM	ENSG00000145391.14	ENST00000404104.7	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGTTGGAAATTAATG	630	False	NA	NA	False	ATTAAA	-20	NA	139556769	139532578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139533367_139546919_139547050_139556097
transcript_10787.known	chr1	-	4169	22	FSM	ENSG00000116584.21	ENST00000361247.9	4169	22	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_16	16.1802488706058	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTACTGTCTTCCATAA	-6	True	NA	-6	True	ATTAAA	-15	NA	155978547	155946853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155948016_155950298_155950483_155950828_155951273_155951482_155951534_155951740_155951777_155951918_155951987_155952115_155952236_155952627_155952829_155954901_155954970_155957712_155957883_155958319_155958397_155961660_155961910_155962104_155962223_155962592_155962719_155962932_155963184_155964987_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978364
transcript_107871.known	chr4	-	6844	5	FSM	ENSG00000196782.13	ENST00000509479.6	6844	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	4.02336923485777	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGTATAGTTTATTTT	17	True	NA	-7	True	AATAAA	-17	NA	140154184	139716752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139720324_139725750_139725836_139730415_139730668_139889356_139890968_140152859
transcript_10788.known	chr1	-	1148	6	FSM	ENSG00000163479.14	ENST00000484320.6	1148	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	723.584521669722	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTTAGAGAAGTGCT	18	True	NA	-74	True	AATGAA	-35	NA	156020912	156009106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018131_156018369_156020012_156020168_156020887
transcript_10789.known	chr1	-	764	7	FSM	ENSG00000116584.21	ENST00000497907.5	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	24.3356163312586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCCAAGACCACCCTAG	3	True	NA	NA	False	CATAAA	-35	NA	155978169	155964987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155965132_155965302_155965413_155965630_155965761_155966415_155966480_155966819_155966888_155969155_155969301_155978066
transcript_107890.known	chr4	+	1013	5	FSM	ENSG00000085871.9	ENST00000515137.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	404.361224649446	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAGGAAGAAGGGAAGG	5	False	NA	NA	False	NA	NA	NA	139665932	139740745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139666078_139695196_139695268_139703454_139703537_139704015_139704197_139740211
transcript_1079.known	chr1	+	1336	4	FSM	ENSG00000069424.16	ENST00000435937.6	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	18.6964048831735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATACAAAAATTAGCT	2	True	NA	NA	False	NA	NA	NA	5992684	6074791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732
transcript_10790.known	chr1	-	825	4	FSM	ENSG00000163479.14	ENST00000496742.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	792.114890656652	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	-3	True	NA	-72	True	AATGAA	-37	NA	156020933	156009104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156020012_156020168_156020887
transcript_107903.known	chr4	-	411	1	FSM	ENSG00000178458.5	ENST00000230495.2	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	NA	False	NA	NA	False	NA	NA	NA	139698554	139698143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139698100_139698600
transcript_107904.known	chr4	+	740	5	FSM	ENSG00000085871.9	ENST00000265498.6	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	39.7020150622106	6961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGAAATGGCTTTGTA	-1	True	NA	21	True	AATAAA	-21	NA	139665818	139704243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139666078_139678542_139678643_139695196_139695268_139703454_139703537_139704015
transcript_107905.known	chr4	+	634	4	FSM	ENSG00000085871.9	ENST00000506797.5	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	343.636435786428	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTTTATTCTGTTT	15	False	NA	2	True	AATAAA	-2	NA	139665834	139704224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139666078_139678542_139678643_139703454_139703537_139704015
transcript_10791.known	chr1	-	476	5	FSM	ENSG00000163479.14	ENST00000531790.5	476	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	772.911176979606	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAACTGATTGGGGCTTC	18	True	NA	NA	False	NA	NA	NA	156020912	156009549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156018251_156018369_156020012_156020168_156020887
transcript_107910.known	chr4	+	1999	4	FSM	ENSG00000153130.18	ENST00000394203.7	1999	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	278.834478977523	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTTTTGATATAGTTG	85	False	NA	36	True	AATAAA	-19	NA	140343460	140382556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_140343709_140379120_140379193_140379568_140379653_140380961
transcript_107913.known	chr4	+	4995	4	FSM	ENSG00000153130.18	ENST00000608372.6	4995	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_3	14.522013940528	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTGGTGATTGTCAT	4	True	NA	NA	False	AATAAA	-20	NA	140373645	140385728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_140373718_140379120_140379193_140379568_140379653_140380961
transcript_107914.known	chr4	+	1838	3	FSM	ENSG00000153130.18	ENST00000506597.2	1838	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	300	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTTGTGTGTGTTT	NA	False	NA	25	True	AATAAA	-8	NA	140373535	140382545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_140373718_140379120_140379193_140380961
transcript_107915.known	chr4	-	405	4	FSM	ENSG00000196951.12	ENST00000609616.1	405	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.1126983722081	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTGTACTTCATTTCT	39	False	NA	NA	False	AATAAA	-36	NA	140373354	140360811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_140360975_140362709_140362819_140369309_140369351_140373262
transcript_107917.known	chr4	-	453	3	FSM	ENSG00000196951.12	ENST00000608178.6	478	3	25	0	3	0	multi-exon	FALSE	canonical	3	51	junction_1	7.5	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCCGTACTTTCTCTG	12	True	NA	NA	False	AATAAA	-14	NA	140373381	140360681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_140360975_140369309_140369351_140373262
transcript_107919.known	chr4	-	2820	16	FSM	ENSG00000153132.13	ENST00000414773.5	2820	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	15.7657857400131	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCCTATTTGACAGGTT	191	False	140427668	0	True	AATAAA	-23	NA	140427661	140388454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_140389305_140390627_140390729_140392218_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140426703_140426788_140427536
transcript_107920.known	chr4	-	2725	15	FSM	ENSG00000153132.13	ENST00000325617.10	2725	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	5.07746120072797	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTATTTGACAGGTTAT	2	True	NA	2	True	AATAAA	-25	NA	140427648	140388452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_140389305_140390627_140390729_140392218_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_107923.nic	chr4	-	1730	13	ISM	ENSG00000153132.13	ENST00000325617.10	2725	15	-38	3846	-25	-3844	5prime_fragment	FALSE	canonical	3	36	junction_3	5.40768486096921	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGAAAGCAGCCCTGG	166	False	NA	NA	False	AAGAAA	-2	NA	140427686	140392298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_107925.nic	chr4	-	1644	12	ISM	ENSG00000153132.13	ENST00000325617.10	2725	15	-38	4139	-25	-4137	5prime_fragment	FALSE	canonical	3	36	junction_2	5.31332334407362	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAGGTAAAGAAAATGGA	166	False	NA	NA	False	AAGAAA	-2	NA	140427686	140392591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_107928.nic	chr4	-	663	5	ISM	ENSG00000153132.13	ENST00000325617.10	2725	15	-38	17404	-25	-5345	5prime_fragment	FALSE	canonical	3	38	junction_3	2.29128784747792	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAAATCTAGATCTTCC	166	False	NA	NA	False	AATATA	-21	NA	140427686	140405856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_10793.known	chr1	-	3582	11	FSM	ENSG00000160803.8	ENST00000368309.4	3582	11	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	28.4281550579703	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGCGTTTGTTTTT	3	True	NA	NA	False	AATAAA	-23	NA	156053798	156035298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051858_156053593
transcript_107930.known	chr4	+	4399	9	FSM	ENSG00000179387.10	ENST00000323570.8	4399	9	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	16.6038399173203	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTTCCTGTTGATA	0	True	NA	15	True	AATAAA	-18	NA	140524167	140553770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_140524281_140525419_140525571_140527465_140527495_140535732_140535831_140537411_140537542_140540167_140540302_140542573_140542643_140543452_140543587_140550229
transcript_107939.known	chr4	+	751	3	FSM	ENSG00000179387.10	ENST00000511887.6	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	28.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTTTCTTGCTCATA	0	True	NA	NA	False	AATAAA	-21	NA	140524167	140527952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_140524281_140525419_140525571_140527465
transcript_107940.known	chr4	-	1621	6	FSM	ENSG00000109424.4	ENST00000262999.4	1621	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	0.4	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTTGAGATCTAT	-1	True	NA	NA	False	AATAAA	-22	NA	140568961	140559430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_140560011_140562192_140562374_140563109_140563212_140563317_140563519_140567778_140567978_140568603
transcript_107941.nnic	chr4	-	2990	9	NNC	ENSG00000109436.8	novel	5554	21	NA	NA	19894	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_8	7.39826837847885	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGCTTTTTATCTTTGTG	207	False	NA	-10	True	AATAAA	-19	NA	140642069	140620781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_140622918_140624115_140624220_140624313_140624389_140627440_140627528_140628299_140628366_140633947_140634189_140639085_140639155_140639329_140639429_140641956
transcript_107945.nic	chr4	+	1602	10	NIC	ENSG00000109445.11	novel	1891	10	NA	NA	-9	-214	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	77.4711415804477	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATGATAAGTATGTT	343	False	NA	8	True	ATTAAA	-18	NA	141220877	141234483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_141221017_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_107959.known	chr4	+	1891	10	FSM	ENSG00000109445.11	ENST00000262990.9	1891	10	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	31.1214268611923	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTGACATTATATTTA	-34	True	NA	NA	False	AATAAA	-19	NA	141220894	141234697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_141221109_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_107966.known	chr4	-	759	2	FSM	ENSG00000250326.2	ENST00000507486.1	759	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCACCCAAGACTATAAG	NA	False	NA	NA	False	NA	NA	NA	143184829	143177659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_143178097_143184507
transcript_107969.known	chr4	+	4135	9	FSM	ENSG00000170185.11	ENST00000510377.5	4135	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	5.02493781056044	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATTTTTTTTTTGTTTTTG	-1	True	NA	NA	False	AATAAA	-32	NA	143184916	143215577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_143186133_143187825_143187962_143195715_143195846_143197822_143197925_143203407_143203567_143206032_143206227_143209563_143209658_143212317_143212425_143213580
transcript_107971.known	chr4	+	2648	10	FSM	ENSG00000109458.9	ENST00000262994.9	7774	10	11	5115	11	43	multi-exon	FALSE	canonical	3	20	junction_3	6.62393713812839	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTACTGTATTTATGC	3	True	NA	NA	False	NA	NA	NA	143336886	143469450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_143337261_143415476_143415772_143433490_143433717_143437998_143438601_143439801_143439888_143440078_143440383_143459384_143459479_143460363_143460488_143466102_143466226_143469030
transcript_107972.known	chr4	+	7684	24	FSM	ENSG00000153147.6	ENST00000283131.4	7684	24	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_9	145.577242243962	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTCATGTGATTATTT	-19	True	NA	5	True	ATTAAA	-16	NA	143513701	143557486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996_143550105_143553118
transcript_107975.known	chr4	-	499	4	FSM	ENSG00000197465.14	ENST00000437468.2	499	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGTAGTATAGTCATGA	-17	False	NA	NA	False	AATAAA	-24	NA	143905563	143875312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_143875510_143876745_143876856_143880410_143880510_143905470
transcript_107976.known	chr4	-	564	5	FSM	ENSG00000250361.9	ENST00000502664.6	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	3.278719262151	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGTATTATAGTCATGA	-1	True	NA	NA	False	AATAAA	-24	NA	144019380	143996103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_143996305_143997539_143997635_143999410_143999450_144001184_144001284_144019250
transcript_107977.known	chr4	-	360	4	FSM	ENSG00000250361.9	ENST00000513128.5	360	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6.64997911442	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATTCTCTACTTCTA	55	False	NA	NA	False	NA	NA	NA	144019324	143996152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_143996305_143997539_143997635_143999410_143999450_144019250
transcript_107978.known	chr4	-	388	4	FSM	ENSG00000250361.9	ENST00000507009.5	388	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.36357401145817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACTTCTAAATAAAAATAA	42	False	NA	NA	False	NA	NA	NA	144019337	143996141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_143996305_143999410_143999450_144001184_144001284_144019250
transcript_107979.known	chr4	-	583	6	FSM	ENSG00000250361.9	ENST00000505583.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.28492607088319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATTCTCTACTTCTA	55	False	NA	NA	False	NA	NA	NA	144019324	143996152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_143996305_143997539_143997635_143999410_143999450_144001184_144001284_144002570_144002695_144019250
transcript_107980.nnic	chr4	-	789	3	NNC	ENSG00000285783.1	novel	1764	15	NA	NA	299802	9311	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTATTGGGCTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	144209576	144201465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_144201979_144206020_144206182_144209461
transcript_107981.nnic	chr4	-	608	3	NNC	ENSG00000285783.1	novel	1764	15	NA	NA	299802	9130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATTTTAAACTTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	144209576	144201646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_144201979_144206020_144206182_144209461
transcript_107983.nnic	chr4	-	447	2	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATTTTAAACTTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	144209576	144201646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr4_-_144201979_144209461
transcript_107984.known	chr4	+	1770	4	FSM	ENSG00000164161.10	ENST00000434550.2	1770	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	3.74165738677394	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCTTGTACAATGTTT	-3	True	NA	NA	False	CATAAA	-19	NA	144646171	144660273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_144646955_144652604_144652798_144658789_144658947_144659636
transcript_107985.nic	chr4	+	734	4	NIC	ENSG00000164161.10	novel	547	4	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	14.3527000944073	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTTGTGCTGGCTA	406	False	NA	NA	False	AATAAA	-20	NA	144647063	144659856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_144647228_144652604_144652798_144658789_144658947_144659636
transcript_107988.known	chr4	-	689	7	FSM	ENSG00000164162.14	ENST00000513054.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	107.649766475465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACCAGTAGAAGAGAGC	390	False	NA	NA	False	ATTAAA	-5	NA	145098180	144995455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097494_145097563_145097687_145097761_145098119
transcript_107989.known	chr4	-	963	7	FSM	ENSG00000164162.14	ENST00000510270.5	963	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	108.048471632977	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATTTGAAGCCAATC	15	True	NA	NA	False	AATAAA	-24	NA	145098189	144995160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_144999256_144999295_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_107995.known	chr4	-	928	6	FSM	ENSG00000164162.14	ENST00000451299.6	928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	107.745255115945	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	15	True	NA	NA	False	AATAAA	-27	NA	145098189	144995157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_108010.known	chr4	-	687	4	FSM	ENSG00000164162.14	ENST00000511466.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	106.615612782035	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	13	True	NA	NA	False	AATAAA	-31	NA	145098191	144995195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145081659_145081751_145095984_145096112_145098130
transcript_108011.known	chr4	-	868	5	FSM	ENSG00000164162.14	ENST00000309439.9	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	79.8342031963744	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-9	True	NA	NA	False	AATAAA	-27	NA	145098213	144995157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098130
transcript_108012.known	chr4	+	3887	18	FSM	ENSG00000164163.11	ENST00000296577.9	3887	18	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_11	78.4887535196333	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTTGACAAGGACAAT	4	True	NA	NA	False	AATAAA	-20	NA	145098310	145129524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931_145120154_145121173_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477_145123601_145124989_145125102_145127525
transcript_10802.known	chr1	+	621	4	FSM	ENSG00000116586.12	ENST00000368305.9	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_3	79.8262000988536	10066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	-32	True	NA	37	True	AATAAA	-16	NA	156054781	156058506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156054958_156055262_156055426_156057977_156058068_156058314
transcript_108025.nic	chr4	+	1250	11	ISM	ENSG00000164163.11	ENST00000507193.5	2146	19	-45	7495	-22	2663	5prime_fragment	FALSE	canonical	3	626	junction_10	73.0540211076707	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGAATTTGAGCTAGCA	352	False	NA	NA	False	TATAAA	-23	NA	145098265	145120078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931
transcript_108026.known	chr4	-	1300	5	FSM	ENSG00000272727.2	ENST00000660722.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6583123951777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATATTTTTATGTACT	5754	False	NA	NA	False	AATAAA	-18	NA	145340486	145335262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_145336120_145336204_145336289_145337200_145337314_145338964_145339085_145340360
transcript_108027.known	chr4	-	1217	5	FSM	ENSG00000272727.2	ENST00000667468.1	1217	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.73205080756888	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATATTTTTATGTACT	-1	True	NA	NA	False	AATAAA	-18	NA	145340483	145335262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_145336120_145336204_145336289_145337200_145337314_145339044_145339085_145340360
transcript_108029.nic	chr4	+	1807	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	42.9249991910956	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	11	False	NA	NA	False	TTTAAA	-2	NA	145481664	145558079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_145481753_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_108030.nic	chr4	+	1900	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	43.6144726234563	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	670	False	NA	NA	False	TTTAAA	-2	NA	145482526	145558079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_145482708_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_108031.nic	chr4	+	2010	7	NIC	ENSG00000170365.10	novel	2085	7	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	46.3896540189728	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	673	False	NA	NA	False	TTTAAA	-2	NA	145482529	145558079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_145482821_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_108032.known	chr4	+	2085	7	FSM	ENSG00000170365.10	ENST00000515385.1	2085	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	47.4368000607124	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	20	True	NA	NA	False	TTTAAA	-2	NA	145482810	145558079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145483177_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_108033.known	chr4	+	1658	7	FSM	ENSG00000170365.10	ENST00000394092.6	1658	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.4871116896026	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAACTATTGAGCCTT	14	True	NA	NA	False	NA	NA	NA	145482804	145557954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145482869_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_108035.known	chr4	+	569	2	FSM	ENSG00000170365.10	ENST00000514831.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCAAGCAGAAGGAGG	-4	True	NA	NA	False	ACTAAA	-28	NA	145481697	145514951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145481753_145514437
transcript_108036.known	chr4	+	573	2	FSM	ENSG00000170365.10	ENST00000503324.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACCGAGTAACTGTGTC	629	False	NA	NA	False	AAAAAG	-44	NA	145482485	145514788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145482708_145514437
transcript_108037.known	chr4	+	5944	7	FSM	ENSG00000151611.17	ENST00000649156.2	5944	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	6.93821943216622	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGGGATCATGTAGT	1	True	NA	3	True	GATAAA	-18	NA	145619384	145660033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985_145646157_145651061_145651148_145653993_145654144_145655146
transcript_108038.known	chr4	+	1615	6	FSM	ENSG00000151611.17	ENST00000647947.1	1615	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.6205335059977	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTATAATAATTTTACAT	NA	False	NA	NA	False	AATAAA	-7	NA	145639079	145655444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145639867_145642362_145642486_145645985_145646157_145651061_145651148_145653993_145654144_145655146
transcript_108048.known	chr4	+	549	5	FSM	ENSG00000164167.12	ENST00000504181.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	540.165946723782	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAATTGGAAAGCCAA	16	True	NA	NA	False	AATAAA	-1	NA	146175747	146190187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_146175812_146182911_146183016_146187273_146187388_146189621_146189782_146190080
transcript_108059.known	chr4	+	454	4	FSM	ENSG00000164167.12	ENST00000649747.1	454	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	611.187005388331	2628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCACTGACATGTGAGT	-4	True	NA	-36	True	NA	NA	NA	146175727	146189767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_146175812_146182905_146183016_146187273_146187388_146189621
transcript_108064.known	chr4	-	3756	12	FSM	ENSG00000120519.16	ENST00000335472.12	3756	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.74238238709061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTGTGGCTTATTTT	-14	True	NA	-3	True	ATTAAA	-25	NA	146521940	146253980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_146256521_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146442782_146442822_146503848_146503925_146509912_146510050_146517037_146517121_146521617
transcript_108067.known	chr4	-	3747	11	FSM	ENSG00000120519.16	ENST00000432059.6	3747	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.11287648325468	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGCTTATTTTTAACCT	364	False	NA	3	True	ATTAAA	-31	NA	146521964	146253974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_146256521_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146503848_146503925_146509912_146510050_146517037_146517121_146521617
transcript_108069.known	chr4	-	1777	13	FSM	ENSG00000137473.19	ENST00000504425.5	1777	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5603819159562	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGATTTTGCATTTCAGT	3	True	NA	NA	False	AATAAA	-20	NA	146945882	146707032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_146707189_146707484_146707549_146803456_146803686_146820124_146820249_146833805_146833898_146867497_146867584_146874715_146874929_146903543_146903730_146909025_146909250_146937593_146937678_146939803_146939902_146945030_146945078_146945708
transcript_108072.known	chr4	-	3461	12	FSM	ENSG00000164169.13	ENST00000322396.7	3461	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	27.0432772232806	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGCGTGCTCTTTGTA	-21	True	NA	NA	False	AATAAA	-25	NA	147684163	147637784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147680322_147680472_147683798
transcript_108079.known	chr4	+	3270	23	FSM	ENSG00000071205.12	ENST00000336498.8	3270	23	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_21	7.67105216527134	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGTCTGTCCTAAT	-20	True	NA	14	True	AATAAA	-14	NA	147732087	148072776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552_147857655_147864845_147864957_147866711_147866817_147875020_147875151_147879231_147879339_147881837_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148063147_148063301_148064415_148064508_148071992
transcript_108081.known	chr4	+	1559	5	FSM	ENSG00000071205.12	ENST00000510379.1	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTGTGTGTATGGT	1	True	NA	NA	False	TTTAAA	-19	NA	147732062	147858488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552
transcript_108085.nic	chr4	-	1565	9	ISM	ENSG00000198589.14	ENST00000507224.5	8826	51	-8	599371	-1	-73554	5prime_fragment	FALSE	canonical	3	86	junction_8	19.2856812169029	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGAGACCTACTATT	-7	True	NA	NA	False	NA	NA	NA	151015285	150914093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
transcript_108087.nnic	chr4	-	1785	9	NNC	ENSG00000198589.14	novel	8826	51	NA	NA	-33972	-73554	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	47.2122865364515	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGAGACCTACTATT	6162	False	NA	NA	False	NA	NA	NA	151049699	150914093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151049395
transcript_10809.known	chr1	+	521	3	FSM	ENSG00000116586.12	ENST00000368304.9	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	791.5	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	-22	True	NA	37	True	AATAAA	-16	NA	156054791	156058506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156054958_156055262_156055426_156058314
transcript_108093.known	chr4	-	10148	57	FSM	ENSG00000198589.14	ENST00000651943.2	10148	57	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_56	49.389641977786	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCAGTCCTAGTTT	-6	True	NA	-5	True	AATAAA	-32	NA	151015284	150264434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
transcript_108095.known	chr4	-	2140	2	FSM	ENSG00000198589.14	ENST00000514435.1	2140	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTACTTTTGAAGAAT	-6	True	NA	NA	False	AAAAAG	-4	NA	151015284	151012804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151014862_151015201
transcript_108096.known	chr4	-	2288	2	FSM	ENSG00000198589.14	ENST00000510841.1	2288	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	151015727	151012828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151014862_151015472
transcript_108097.known	chr4	+	862	6	FSM	ENSG00000145425.10	ENST00000506126.5	862	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7159.26196196228	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTATTTGTGATGGTTT	31	False	NA	-1	True	AATAAA	-2	NA	151099673	151104623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099715_151100426_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_108102.known	chr4	+	985	6	FSM	ENSG00000145425.10	ENST00000514682.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7160.45952156704	4435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	18	True	NA	13	True	AATAAA	-16	NA	151099628	151104637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099837_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_108105.known	chr4	+	762	6	FSM	ENSG00000145425.10	ENST00000510993.1	762	6	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_1	7142.49621350967	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGACAGGTGCTAAAGTT	230	False	NA	-96	True	NA	NA	NA	151099872	151104528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099967_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_108110.known	chr4	+	576	4	FSM	ENSG00000145425.10	ENST00000509736.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8514.79032168275	6660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	13	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099715_151102870_151103080_151104176_151104287_151104471
transcript_108112.known	chr4	+	671	6	FSM	ENSG00000145425.10	ENST00000515792.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	7460.13073343893	5869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	28	False	NA	13	True	AATAAA	-16	NA	151099670	151104637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099715_151100484_151100589_151100974_151101013_151102870_151103080_151104176_151104287_151104471
transcript_108113.known	chr4	+	674	6	FSM	ENSG00000145425.10	ENST00000507327.5	674	6	0	0	0	0	multi-exon	FALSE	canonical	1	83	junction_1	7128.5248796648	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTGAAGGCAGTAGTT	26	False	NA	NA	False	NA	NA	NA	151099668	151104490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099713_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_108114.known	chr4	+	686	6	FSM	ENSG00000145425.10	ENST00000512797.5	686	6	0	0	0	0	multi-exon	FALSE	canonical	2	734	junction_4	7183.92114656056	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTAAAGTTGAACGAGCT	25	False	NA	-87	True	NA	NA	NA	151099667	151104537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099715_151100484_151100589_151100974_151101163_151102870_151103042_151104176_151104287_151104471
transcript_108117.known	chr4	+	11517	14	FSM	ENSG00000164142.16	ENST00000435205.6	11517	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.1707318803638	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTCATTTATTC	-8	True	NA	40	True	ATTAAA	-17	NA	151409175	151670503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151409466_151454700_151454809_151482523_151482649_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
transcript_108118.known	chr4	-	2369	13	FSM	ENSG00000059691.12	ENST00000263985.11	2369	13	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	20.0005208265518	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCCAATAAATTTA	-10	True	NA	NA	False	AATAAA	-14	NA	151761007	151670503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_108121.nnic	chr4	-	1927	12	NIC	ENSG00000059691.12	novel	2369	13	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	39.8339528750649	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATTCTAAGAAAACTTTT	NA	False	NA	-15	True	AATAAA	-23	NA	151761045	151670848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_151671303_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_108126.known	chr4	-	1519	8	FSM	ENSG00000059691.12	ENST00000512306.5	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	19.025224930956	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAATTGAAACTTTTA	12	True	NA	NA	False	AATAAA	-21	NA	151760985	151703341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_108128.known	chr4	-	605	3	FSM	ENSG00000059691.12	ENST00000508611.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	88	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTTTTACTGCC	7	True	NA	2	True	ATTAAA	-24	NA	151760990	151721945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151722216_151758771_151758923_151760806
transcript_108129.nnic	chr4	-	1232	3	NNC	ENSG00000059691.12	novel	605	3	NA	NA	-38	-1	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	86.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTGTGTTTTACTGC	NA	False	NA	1	True	ATTAAA	-23	NA	151761045	151721946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_151722789_151758771_151758923_151760806
transcript_10813.known	chr1	+	868	2	FSM	ENSG00000116586.12	ENST00000489664.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	1687	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAGGACTAGGGAAAAAAT	7	True	NA	NA	False	NA	NA	NA	156054820	156055993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156054958_156055262
transcript_108130.nic	chr4	-	1688	2	ISM	ENSG00000059691.12	ENST00000508611.1	605	3	-55	35528	-38	-35528	5prime_fragment	FALSE	canonical	3	180	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCTGGAAGCTGGTT	NA	False	NA	NA	False	NA	NA	NA	151761045	151757473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_151758923_151760806
transcript_108131.known	chr4	-	2261	11	FSM	ENSG00000109670.16	ENST00000603841.1	2261	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	10.3614670775909	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	152411878	152322818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152323150_152324183_152324395_152326005_152326232_152328207_152328390_152329671_152329786_152330731_152330869_152332595_152332720_152337801_152337937_152346929_152347072_152350041_152350125_152411302
transcript_108132.known	chr4	-	755	3	FSM	ENSG00000109670.16	ENST00000604095.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTAATTCAGTGTGTAG	870	False	NA	NA	False	ATTAAA	-40	NA	152535210	152530272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152530851_152534940_152535034_152535126
transcript_108133.known	chr4	+	3000	1	FSM	ENSG00000268471.6	ENST00000604157.1	3000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGTATATATGAGTCCCA	-21	True	NA	42	True	AATAAA	-39	NA	152536263	152539263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152536300_152539300
transcript_108134.known	chr4	-	459	1	FSM	ENSG00000240669.1	ENST00000496058.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGTCCTCAAAATATT	NA	False	NA	NA	False	NA	NA	NA	152614333	152613874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152613900_152614300
transcript_108135.known	chr4	-	10534	7	FSM	ENSG00000170006.12	ENST00000304385.8	10534	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGCTTCTCTTCTTT	5	True	NA	NA	False	ATTAAA	-28	NA	152679997	152618627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152628562_152640927_152640986_152643087_152643174_152644414_152644443_152652537_152652577_152652666_152652928_152679869
transcript_10814.known	chr1	+	623	3	FSM	ENSG00000116586.12	ENST00000487106.5	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1602	junction_2	97.5	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	271	False	NA	37	True	AATAAA	-16	NA	156055084	156058506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156055426_156057977_156058068_156058314
transcript_108140.known	chr4	-	2438	2	FSM	ENSG00000169989.3	ENST00000304337.3	2438	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGTTTAATTGCAAAA	15	True	NA	NA	False	CATAAA	-18	NA	152779730	152769353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152771543_152779481
transcript_108144.nnic	chr4	-	710	2	NNC	ENSG00000169989.3	novel	2438	2	NA	NA	-176	-5966	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTTGTGGTAATTTGT	NA	False	NA	1	True	AATAAA	-20	NA	152779906	152775319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_152775605_152779481
transcript_108151.known	chr4	+	3424	9	FSM	ENSG00000164144.16	ENST00000451320.6	3424	9	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	83.9455738857029	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	-34	True	NA	NA	False	AATAAA	-21	NA	152779936	152912357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_108157.known	chr4	+	1601	8	FSM	ENSG00000164144.16	ENST00000405727.6	1601	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	78.8778440736959	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGAAACTATTT	0	True	NA	NA	False	ATTAAA	-30	NA	152779970	152910664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_108164.known	chr4	+	514	4	FSM	ENSG00000164144.16	ENST00000510831.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTAGTTCCTAAATAT	22	True	NA	NA	False	AATAAA	-17	NA	152779992	152810388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780092_152807203_152807249_152809672_152809734_152810079
transcript_108165.known	chr4	+	531	4	FSM	ENSG00000164144.16	ENST00000509413.1	531	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44948974278318	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAGTAGTTCCTAAAT	138	False	NA	NA	False	AATAAA	-15	NA	152780108	152810386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780227_152807203_152807249_152809672_152809734_152810079
transcript_108171.known	chr4	+	1302	8	FSM	ENSG00000164144.16	ENST00000356064.3	1302	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	45.7116070643788	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGTTGTTATATTTCTA	14	True	NA	NA	False	AATAAA	-7	NA	152779984	152910244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_108174.known	chr4	+	6597	12	FSM	ENSG00000137460.10	ENST00000511601.6	6597	12	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	4.7742421838185	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTTTCATCTCAGCTT	-20	True	NA	15	True	AATAAA	-17	NA	152936322	152979671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152936410_152942927_152943556_152953498_152953561_152954216_152954320_152960564_152960651_152960743_152960845_152962813_152962885_152963022_152963131_152964904_152964976_152967979_152968098_152972376_152972542_152974674
transcript_108178.known	chr4	-	1048	2	FSM	ENSG00000287642.2	ENST00000685840.1	1344	2	120	176	116	0	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGACATGTATCCTTGG	84	False	NA	NA	False	AATAAA	-16	NA	152936761	152934515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152935451_152936648
transcript_108179.nnic	chr4	-	1160	2	FSM	ENSG00000287642.2	ENST00000653733.2	1025	2	-135	0	-131	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGACATGTATCCTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	152937012	152934515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152935312_152936648
transcript_108182.known	chr4	+	6755	12	FSM	ENSG00000109654.16	ENST00000338700.10	6755	12	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	30.7525447445323	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	-1	True	NA	14	True	AATAAA	-15	NA	153204442	153339317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_108184.known	chr4	+	6871	12	FSM	ENSG00000109654.16	ENST00000675977.1	6871	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	43.8713370536622	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	NA	False	NA	8	True	AATAAA	-9	NA	153257367	153339311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153257608_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_108185.known	chr4	+	6413	10	FSM	ENSG00000109654.16	ENST00000675425.1	6413	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	59.9866240234304	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	2	True	NA	8	True	AATAAA	-9	NA	153204445	153339311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_108188.known	chr4	+	679	3	FSM	ENSG00000109654.16	ENST00000632856.2	679	3	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	39	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	-1	True	NA	14	True	ATTAAA	-17	NA	153204442	153276268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153204561_153270334_153270520_153275892
transcript_10819.known	chr1	+	1100	5	FSM	ENSG00000132698.15	ENST00000361084.10	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	34.4564943080401	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	-10	True	NA	25	True	AATAAA	-16	NA	156061159	156070504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156061444_156065910_156066107_156068269_156068464_156069670_156069752_156070159
transcript_108191.nic	chr4	+	1223	3	ISM	ENSG00000109654.16	ENST00000676374.1	7056	12	-237	63043	-237	0	5prime_fragment	FALSE	canonical	1	2	junction_1	84	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	NA	False	NA	14	True	ATTAAA	-17	NA	153257101	153276268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_153257767_153270337_153270520_153275892
transcript_108192.known	chr4	+	766	3	FSM	ENSG00000109654.16	ENST00000482578.3	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	65	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	18	False	NA	14	True	ATTAAA	-17	NA	153257402	153276268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153257608_153270334_153270520_153275892
transcript_108194.nnic	chr4	+	1274	8	NIC	ENSG00000121211.8	novel	638	6	NA	NA	278	110	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	105.276312819249	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAAGTGTAAAATGC	267	False	NA	-9	True	NA	NA	NA	153344965	153414975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_153345507_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_108195.nnic	chr4	+	806	7	NIC	ENSG00000121211.8	novel	929	8	NA	NA	-26	110	combination_of_known_splicesites	TRUE	canonical	1	2	junction_6	115.645531210198	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAAGTGTAAAATGC	5656	False	NA	-9	True	NA	NA	NA	153344622	153414975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153414750
transcript_1082.known	chr1	+	448	2	FSM	ENSG00000069424.16	ENST00000655748.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTTTTGGTTTTCTTT	-8	True	NA	NA	False	TATAAA	-23	NA	5992674	6018968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_5992789_6018634
transcript_108207.known	chr4	+	929	8	FSM	ENSG00000121211.8	ENST00000240488.8	929	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	34.1461444920722	2244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATCAAAACCAT	-11	True	NA	29	True	AATAAA	-42	NA	153344687	153415118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_108212.known	chr4	+	830	7	FSM	ENSG00000121211.8	ENST00000622785.4	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	114.373656640563	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAGATTTACAAATGAT	-1	True	NA	6	True	AATAAA	-19	NA	153344648	153415095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153408970_153409016_153414750
transcript_108225.known	chr4	+	301	3	FSM	ENSG00000121211.8	ENST00000503967.1	301	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	30.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTTTATGGAAAACCTA	12	True	NA	NA	False	NA	NA	NA	153344661	153355809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153344741_153350063_153350130_153355653
transcript_108228.known	chr4	+	638	6	FSM	ENSG00000121211.8	ENST00000504860.2	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_5	39.6958436111389	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTACATATTAAATCAT	5365	False	NA	NA	False	AAGAAA	-33	NA	153350063	153409145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970
transcript_108229.known	chr4	+	5006	35	FSM	ENSG00000121210.16	ENST00000409959.8	5006	35	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_11	18.4578684190346	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTGCTCTGTTTTTTT	3	True	NA	99	True	AATAAA	-14	NA	153466359	153636711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153466522_153467210_153467282_153473844_153473889_153550072_153550142_153555786_153555911_153556965_153557083_153558257_153558369_153580825_153580904_153581406_153581561_153583189_153583249_153583563_153583673_153584834_153584932_153585457_153585612_153586208_153586380_153587741_153587812_153588889_153589008_153591052_153591195_153592474_153592585_153593798_153593872_153596257_153596386_153598589_153598733_153602151_153602339_153602541_153602728_153603302_153603453_153603801_153604431_153612251_153612401_153620755_153620881_153621682_153621850_153622897_153623084_153626146_153626226_153627604_153627688_153632717_153632839_153634191_153634281_153635431_153635572_153636300
transcript_108231.known	chr4	+	3596	3	FSM	ENSG00000137462.9	ENST00000642700.2	3596	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCACATCCGGACTCTG	-2	True	NA	NA	False	AATAAA	-29	NA	153684279	153706260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153684361_153687901_153688048_153702891
transcript_108234.known	chr4	-	1358	9	FSM	ENSG00000145428.15	ENST00000347063.9	1358	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	29.6426635105552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTTAACTCATG	-23	True	NA	NA	False	AATAAA	-34	NA	153760024	153710159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153728206_153728362_153748644_153748787_153751437_153751476_153759796
transcript_108240.nnic	chr4	-	916	7	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-6	0	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	26.1369257734893	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTTAACTCATG	-4	True	NA	NA	False	AATAAA	-34	NA	153759879	153710159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153751437_153751476_153759796
transcript_108245.known	chr4	-	1996	3	FSM	ENSG00000145423.5	ENST00000274063.5	1996	3	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	10.5	11029	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTCTTCTGTCTTGT	-9	True	NA	-3	True	TATAAA	-22	NA	153789083	153780590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_153781756_153785863_153785945_153788333
transcript_10825.known	chr1	+	681	4	FSM	ENSG00000132698.15	ENST00000473336.5	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	50.1752484354144	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	176	False	NA	25	True	AATAAA	-16	NA	156061382	156070504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156061444_156068269_156068464_156069670_156069752_156070159
transcript_108250.nnic	chr4	+	1277	3	NNC	ENSG00000280241.4	novel	977	5	NA	NA	-4439	-103621	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAATACACAAAAA	NA	False	NA	NA	False	NA	NA	NA	154137682	154165839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_154137971_154142115_154142243_154164977
transcript_108259.known	chr4	-	3317	15	FSM	ENSG00000171566.12	ENST00000499023.7	3317	15	0	0	0	0	multi-exon	TRUE	canonical	3	491	junction_4	57.9583330276755	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCATTCCTGAGAGAT	8	True	NA	-8	True	AATAAA	-16	NA	154550400	154535004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547010_154547065_154547710_154547854_154548828_154548936_154550299
transcript_10826.known	chr1	+	868	3	FSM	ENSG00000132698.15	ENST00000487325.5	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	41.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCATGGGCTCTAAATC	-1	True	NA	NA	False	NA	NA	NA	156061205	156070106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156061444_156068269_156068464_156069670
transcript_108260.known	chr4	-	998	7	FSM	ENSG00000171566.12	ENST00000506627.5	998	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	216.431218224687	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCCCTACCCCTGTGT	9472	False	NA	-12	True	AATAAA	-7	NA	154540936	154536520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538083_154539104_154539214_154539950_154540054_154540593_154540696_154540784
transcript_108261.known	chr4	-	1673	15	FSM	ENSG00000171566.12	ENST00000302078.9	1673	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	153.884929179473	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGATATCCAGTCATTT	11	True	NA	-6	True	ATTAAA	-21	NA	154550397	154536618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547037_154547065_154547710_154547854_154548828_154548936_154550299
transcript_108262.known	chr4	-	2209	5	FSM	ENSG00000171560.17	ENST00000403106.8	2209	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCTGAAACTCTATTTG	1	True	NA	-15	True	AATAAA	-24	NA	154590742	154585274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_154586919_154587511_154587658_154588792_154588977_154589436_154589563_154590633
transcript_108267.known	chr4	+	4901	3	FSM	ENSG00000121207.12	ENST00000336356.4	4901	3	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	85.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTCTTTAAATTTTAAA	0	True	NA	9	True	AATAAA	-18	NA	154743999	154753120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154744223_154744325_154744867_154748983
transcript_108274.nic	chr4	+	1051	2	ISM	ENSG00000121207.12	ENST00000500890.6	1776	3	9	62717	-7	-62717	5prime_fragment	FALSE	canonical	3	14	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCTGGGCATGGT	-19	True	NA	NA	False	AATACA	-14	NA	154626953	154637183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_154627150_154636328
transcript_108275.known	chr4	+	5002	2	FSM	ENSG00000121207.12	ENST00000510733.1	5002	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTCTTTAAATTTTA	0	True	NA	7	True	AATAAA	-16	NA	154743999	154753118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154744867_154748983
transcript_108276.known	chr4	+	2315	6	FSM	ENSG00000151962.8	ENST00000514866.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.16619037896906	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGCTAGTTTATACCA	36	False	NA	NA	False	AATGAA	-5	NA	154781212	154827385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154781437_154796741_154796904_154797810_154798279_154798781_154799565_154820362_154820423_154826767
transcript_108277.known	chr4	-	1615	3	FSM	ENSG00000250538.6	ENST00000511017.6	1615	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGATAAACTGAAATGAAAG	2362	False	NA	NA	False	AATAAA	-21	NA	155208478	155206528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155207816_155208024_155208177_155208302
transcript_108279.known	chr4	+	3619	2	FSM	ENSG00000185149.6	ENST00000329476.4	3619	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAATTGTGTGGAATTTT	-4	True	NA	NA	False	ATTAAA	-16	NA	155208635	155217076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155209070_155213891
transcript_10828.known	chr1	-	6591	2	FSM	ENSG00000254726.3	ENST00000532414.3	6591	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCTGTCTTCGTTCTCTG	13	True	NA	-9	True	ATTAAA	-45	NA	156082465	156072012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156077683_156081544
transcript_108280.known	chr4	-	7328	14	FSM	ENSG00000164114.19	ENST00000311277.9	7328	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	14.8813850599255	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGCCTTTTTATGTTT	-10	True	NA	-37	True	AATAAA	-20	NA	155376965	155342657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_108310.known	chr4	-	1644	11	FSM	ENSG00000164114.19	ENST00000433024.5	1644	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	15.6384142418597	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGCTTGAAGAAAAA	-4	True	NA	NA	False	AAGAAA	-25	NA	155376885	155353252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368810_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_10832.known	chr1	+	1514	10	FSM	ENSG00000160789.24	ENST00000675431.1	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	59.669046093669	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	-3	True	NA	16	True	ATTAAA	-19	NA	156126174	156137866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156126224_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
transcript_108322.known	chr4	-	728	4	FSM	ENSG00000164114.19	ENST00000481250.1	728	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	17.9691092959247	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAACTTCAATTTTAC	7	True	NA	NA	False	AAAAAG	-37	NA	155376813	155372995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155373457_155374936_155375022_155375775_155375915_155376770
transcript_108323.known	chr4	+	577	7	FSM	ENSG00000164116.17	ENST00000515602.5	577	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATCCTTGGGGTGGTTG	0	True	NA	NA	False	TTTAAA	-21	NA	155666935	155710611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155666966_155667345_155667420_155696755_155696850_155696934_155697123_155703931_155703994_155708235_155708295_155710541
transcript_108324.known	chr4	+	1540	6	FSM	ENSG00000164116.17	ENST00000512983.5	1540	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAGCTGTAATAAACTG	-18	True	NA	NA	False	GATAAA	-28	NA	155666827	155711381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155666966_155667345_155667420_155696755_155697123_155703931_155703994_155708235_155708295_155710541
transcript_108325.known	chr4	+	3382	14	FSM	ENSG00000061918.14	ENST00000264424.13	3382	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	6.37116284333805	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATGTCATCAGCTTA	-25	True	NA	NA	False	AATAAA	-31	NA	155759020	155807811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802341_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_108326.known	chr4	+	1951	14	FSM	ENSG00000061918.14	ENST00000503520.5	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	9.01609343498626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCTCACTATCCGTT	44	True	NA	NA	False	NA	NA	NA	155759089	155806548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802440_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_108327.known	chr4	+	1700	12	FSM	ENSG00000151790.9	ENST00000536354.3	1700	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTGAAATATTGATT	-2	True	NA	NA	False	AATAAA	-22	NA	155903695	155920406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155903794_155904017_155904124_155905066_155905158_155907721_155907793_155908886_155909015_155910024_155910212_155911496_155911605_155914322_155914435_155915854_155915913_155917394_155917475_155918148_155918240_155919836
transcript_108344.nnic	chr4	-	1089	3	Antisense	novelGene_ENSG00000249013.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGACTTCTGTTTTCTTT	NA	False	NA	2	True	TATAAA	-22	NA	156109011	155989621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_155990260_156106659_156106848_156108748
transcript_108346.known	chr4	+	3033	10	FSM	ENSG00000109738.11	ENST00000264428.9	3033	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	3.23178657161089	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTAATTCAGTGCTAT	-31	True	NA	NA	False	AATAAA	-21	NA	157076149	157172090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_157076298_157077995_157078147_157120555_157120663_157122329_157122398_157136468_157136699_157136803_157136887_157138808_157138950_157143806_157143960_157152717_157153011_157170431
transcript_108347.known	chr4	+	2765	9	FSM	ENSG00000109738.11	ENST00000541722.5	2765	9	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_8	3.278719262151	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTAATTCAGTGCTAT	-56	True	NA	NA	False	AATAAA	-21	NA	157076124	157172090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_157076298_157077995_157078147_157120555_157120663_157122329_157122398_157136468_157136699_157136803_157136887_157138808_157138950_157143806_157143960_157170431
transcript_108349.known	chr4	+	3210	13	FSM	ENSG00000164124.11	ENST00000296529.11	3210	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	5.22547180219696	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTATTACCTCTATA	-1	True	NA	NA	False	AGTAAA	-26	NA	158210485	158255416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158210587_158211452_158211575_158212607_158212777_158215190_158215314_158217320_158217421_158219309_158219391_158232900_158232983_158235437_158235506_158237524_158237644_158240298_158240419_158241508_158241607_158244295_158244350_158253443
transcript_10835.nnic	chr1	+	436	3	NIC	ENSG00000160789.24	novel	472	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	2	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTCATCCATCC	-9	True	NA	5	True	AATAAA	-18	NA	156082567	156093811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156082664_156082947_156083185_156093708
transcript_108351.known	chr4	+	692	3	FSM	ENSG00000248429.5	ENST00000509463.5	692	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTTCTGGTAAACAT	371	False	NA	NA	False	NA	NA	NA	158171227	158199451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158171481_158179660_158179736_158199087
transcript_108353.known	chr4	+	1633	3	FSM	ENSG00000164124.11	ENST00000509278.5	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACTCTTTTTATTTTTT	-2	True	NA	NA	False	TATAAA	-26	NA	158210484	158214016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158210587_158211452_158211575_158212607
transcript_108357.known	chr4	+	4425	14	FSM	ENSG00000171503.13	ENST00000684036.1	4425	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.9152844098156	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGTCTATTTTAAAAAAT	-9	True	NA	NA	False	TATAAA	-4	NA	158672306	158710718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158672491_158679289_158679520_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_108360.known	chr4	+	3111	13	FSM	ENSG00000171503.13	ENST00000511912.6	3111	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	11.1080551353011	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAAGGTGTCAAAAGAA	-20	True	NA	NA	False	NA	NA	NA	158672295	158709623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158672491_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_108361.known	chr4	+	1903	12	FSM	ENSG00000171503.13	ENST00000307738.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	19.8177647996158	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTCTGCATATTACT	23	True	NA	-63	True	NA	NA	NA	158672338	158708599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158672491_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_108366.known	chr4	-	1830	10	FSM	ENSG00000171497.5	ENST00000307720.4	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_5	57.7850422783536	2011	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTCCTTCGATTCTT	-3	True	NA	-5	True	AATAAA	-23	NA	158723396	158709126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_158709825_158710627_158710671_158710761_158710849_158713118_158713261_158715296_158715404_158715561_158715685_158717011_158717201_158719179_158719287_158721342_158721484_158723203
transcript_108383.known	chr4	+	987	2	FSM	ENSG00000171503.13	ENST00000510353.5	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGAAGAAGA	0	True	NA	24	True	NA	NA	NA	158672315	158680101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158672491_158679289
transcript_108385.known	chr4	-	1103	2	FSM	ENSG00000205208.5	ENST00000508836.1	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTTTTTGTACTTG	NA	False	NA	NA	False	AATATA	-3	NA	158672255	158668924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_158669769_158671996
transcript_108389.known	chr4	-	3358	2	FSM	ENSG00000205208.5	ENST00000508457.1	3358	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTAATCTGTCTTTTG	-17	True	NA	-11	True	AATAAA	-15	NA	158671892	158666683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_158669765_158671615
transcript_10839.nnic	chr1	+	584	2	NIC	ENSG00000160789.24	novel	472	4	NA	NA	73	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTCATCCATCC	127	False	NA	5	True	AATAAA	-18	NA	156082703	156093811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156083185_156093708
transcript_108390.known	chr4	+	7038	17	FSM	ENSG00000052795.13	ENST00000264433.11	7038	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	8.35141267990033	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCCTGGTGCTGCATG	20	True	NA	10	True	AATAAA	-21	NA	158769025	158908050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158769320_158825915_158826043_158829078_158829226_158831860_158831962_158832066_158832139_158833527_158833629_158835404_158835477_158851320_158851451_158859056_158859259_158859577_158859667_158861341_158861489_158861606_158861777_158868101_158869429_158870312_158870470_158891445_158891647_158895749_158895866_158904465
transcript_108396.known	chr4	-	1876	8	FSM	ENSG00000145414.9	ENST00000274054.3	1876	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	37.2279245640546	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATTCATGCCTTCTC	-11	True	NA	-26	True	ATTAAA	-22	NA	163166890	163128668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163129349_163133153_163133257_163137198_163137251_163140222_163140384_163145781_163145865_163148340_163148435_163164216_163164392_163166362
transcript_108398.known	chr4	-	1159	4	FSM	ENSG00000145414.9	ENST00000502973.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	78.3212756677406	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAACTTTTTGCTGTTCT	127	False	NA	-7	True	AATAAA	-9	NA	163166752	163156963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163157455_163158224_163158328_163164216_163164392_163166362
transcript_108403.known	chr4	-	568	4	FSM	ENSG00000164128.7	ENST00000512819.1	568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.3688214899363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTACCATCTTTAACACT	-1	True	NA	NA	False	NA	NA	NA	163332596	163325625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163325759_163325855_163326135_163326664_163326706_163332481
transcript_108405.known	chr4	-	2762	3	FSM	ENSG00000164128.7	ENST00000296533.3	2762	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-1	True	NA	-2	True	ATTAAA	-27	NA	163332596	163323961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163325759_163325855_163326706_163332481
transcript_108408.known	chr4	+	1890	4	FSM	ENSG00000164129.12	ENST00000338566.8	1890	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTACTTTTGTCCAAAA	-14	True	NA	NA	False	AGTAAA	-17	NA	163343891	163351934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163344001_163345713_163345754_163347451_163347523_163350264
transcript_108412.known	chr4	+	933	7	FSM	ENSG00000198498.10	ENST00000509657.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	306.022557265891	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATCTGCAGAAGTTG	1180	False	NA	NA	False	AATAGA	-3	NA	163494441	163519720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163494560_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_108428.known	chr4	+	1749	7	FSM	ENSG00000198498.10	ENST00000358572.10	1749	7	0	0	0	0	multi-exon	FALSE	canonical	3	816	junction_2	64.9965811066671	5925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACAGTCCTAATTTT	25	True	NA	20	True	AATAAA	-20	NA	163494689	163520539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_108429.known	chr4	+	803	6	FSM	ENSG00000198498.10	ENST00000513272.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	345.144955055119	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGATCTGCAGAAGTT	2	True	NA	NA	False	AATAGA	-2	NA	163494666	163519719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163517433_163517477_163519333
transcript_108430.known	chr4	+	927	1	FSM	ENSG00000273449.1	ENST00000609356.1	927	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAACTTAGTTTTTGAGT	NA	False	NA	NA	False	AATAAA	-27	NA	163529770	163530697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163529800_163530700
transcript_108438.known	chr4	+	674	4	FSM	ENSG00000248329.6	ENST00000510062.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	287.795065975774	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGATGAATAAAACATC	8	False	NA	NA	False	AATAAA	-20	NA	164877241	164898965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_164877408_164878919_164879010_164896807_164896986_164898725
transcript_108442.known	chr4	+	2432	3	FSM	ENSG00000248329.6	ENST00000507152.6	2432	3	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_2	36.5	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGTCCTTACTTT	-7	True	NA	26	True	AATAAA	-18	NA	164877177	164897527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_164877408_164878919_164879010_164895415
transcript_108444.nnic	chr4	+	830	3	NIC	ENSG00000248329.6	novel	674	4	NA	NA	-270	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_2	293	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATGATGAATAAAACATC	NA	False	NA	NA	False	AATAAA	-20	NA	164876907	164898965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_164877408_164878919_164879010_164898725
transcript_108446.nnic	chr4	+	566	3	NNC	ENSG00000248329.6	novel	551	2	NA	NA	-192	-91	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	286.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGACTTTTGAGAATT	-4	True	NA	NA	False	AATAAA	-18	NA	164876985	164879165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_164877226_164877327_164877408_164878919
transcript_108450.known	chr4	+	551	2	FSM	ENSG00000248329.6	ENST00000515275.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACAGCTATTTGGGGG	9	True	NA	NA	False	NA	NA	NA	164877193	164879256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_164877408_164878919
transcript_108452.nnic	chr4	+	482	2	NNC	ENSG00000248329.6	novel	551	2	NA	NA	-188	-91	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGACTTTTGAGAATT	0	True	NA	NA	False	AATAAA	-18	NA	164876989	164879165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_164877226_164878919
transcript_108453.known	chr4	-	446	1	FSM	ENSG00000244146.1	ENST00000495104.1	446	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	41	False	NA	NA	False	AATACA	-33	NA	164921063	164920617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_164920600_164921100
transcript_108454.nnic	chr4	-	2694	3	NNC	ENSG00000183439.9	novel	1571	5	NA	NA	25	88	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	33.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCTTATATACTTT	9	True	NA	-71	True	AATAAA	-18	NA	164977632	164968285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_164970340_164976687_164976826_164977130
transcript_108455.known	chr4	-	2237	3	FSM	ENSG00000183439.9	ENST00000508856.2	2237	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	28.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAACATATATTACT	9	False	NA	NA	False	ATTAAA	-45	NA	164977668	164968373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_164970340_164976687_164976821_164977530
transcript_108460.known	chr4	+	2175	1	FSM	ENSG00000250486.5	ENST00000648094.1	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGCATTTTCTGTTTA	-2	True	NA	NA	False	ATTAAA	-17	NA	164956947	164959122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_164956900_164959100
transcript_108464.known	chr4	-	9953	6	FSM	ENSG00000170088.14	ENST00000306480.11	9953	6	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_2	5.03587132480567	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATAATCACTGCTAT	3	True	NA	-5	True	AATAAA	-17	NA	165112860	165070607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_165079797_165085585_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165112746
transcript_10847.known	chr1	+	1352	2	FSM	ENSG00000160785.14	ENST00000684582.1	1352	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGCAGTGGGTAGATTC	-7	True	NA	NA	False	NA	NA	NA	156194102	156211446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156194248_156210239
transcript_108473.nic	chr4	-	482	3	ISM	ENSG00000170088.14	ENST00000505095.1	789	6	-34	17202	-28	-17202	5prime_fragment	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACGTACACTTTTACT	-3	True	NA	NA	False	NA	NA	NA	165112888	165102787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_165103097_165111648_165111680_165112746
transcript_108474.nic	chr4	-	474	2	ISM	ENSG00000170088.14	ENST00000306480.11	9953	6	-53	32182	-53	-17204	5prime_fragment	FALSE	canonical	3	40	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTACGTACACTTTTA	NA	False	NA	NA	False	NA	NA	NA	165112913	165102789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_165103097_165112746
transcript_108476.nic	chr4	+	1947	7	ISM	ENSG00000109466.14	ENST00000506761.1	2169	12	65261	-436	42352	0	3prime_fragment	FALSE	canonical	3	62	junction_6	12.8192563486863	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACAGTGTTCTTG	NA	False	NA	12	True	AATAAA	-14	NA	165305608	165323147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_165305726_165310552_165310751_165311463_165311566_165313237_165313367_165314025_165314167_165317825_165317970_165322031
transcript_108479.nic	chr4	+	2410	6	NIC	ENSG00000052802.13	novel	2227	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	608.268493348127	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	-37	True	NA	17	True	AATAAA	-2	NA	165327667	165343164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_10848.known	chr1	+	3467	4	FSM	ENSG00000160785.14	ENST00000359511.5	3467	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	4.08248290463863	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTTGCGCGTATTT	-6	True	NA	14	True	ATTAAA	-21	NA	156194103	156212796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156194248_156199834_156200473_156207885_156208014_156210239
transcript_108480.known	chr4	+	1789	5	FSM	ENSG00000052802.13	ENST00000393766.6	1789	5	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	603.396791091898	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	-19	True	NA	-15	True	ATTAAA	-39	NA	165327685	165343029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_165327765_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_108483.known	chr4	+	2227	6	FSM	ENSG00000052802.13	ENST00000261507.11	2227	6	0	0	0	0	multi-exon	FALSE	canonical	3	1504	junction_1	75.5671886469253	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	-36	True	NA	17	True	AATAAA	-2	NA	165327668	165343164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_108486.known	chr4	-	2986	12	FSM	ENSG00000196104.11	ENST00000357154.7	2986	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	16.2729812067541	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTGTTCCTCAATGGT	-3	True	NA	-2	True	AATAAA	-17	NA	167234587	166733383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_166735091_166737466_166737605_166741996_166742060_166754507_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167083237_167083247_167233984_167234174_167234449
transcript_108487.known	chr4	-	2900	11	FSM	ENSG00000196104.11	ENST00000504953.5	2900	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	7.66093989011792	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAACTGTTCCTCAAT	NA	False	NA	-5	True	AATAAA	-14	NA	167234757	166733386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_166735091_166737466_166737605_166741996_166742060_166754507_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167233984_167234174_167234693
transcript_108490.known	chr4	-	1456	8	FSM	ENSG00000196104.11	ENST00000512648.5	1456	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	9.35687022503589	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCATTCACCATAAAG	9	True	NA	NA	False	ATTAAA	-14	NA	167234552	166754085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167233984_167234174_167234449
transcript_108500.known	chr4	-	2884	11	FSM	ENSG00000196104.11	ENST00000357545.9	2884	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	8.38093073590279	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTGTTCCTCAATGGT	1	True	NA	-2	True	AATAAA	-17	NA	167234494	166733383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_166735091_166737466_166737605_166741996_166742060_166754507_166754730_166792169_166792290_166889129_166889245_166912619_166912744_167000348_167000464_167062491_167062538_167233984_167234174_167234449
transcript_108501.known	chr4	-	6267	39	FSM	ENSG00000137628.18	ENST00000679510.1	6267	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.7861201291332	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTCTCATTGTGTTAAAT	NA	False	NA	2	True	AATAAA	-22	NA	168318883	168216290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168217033_168220654_168220718_168221729_168221882_168224242_168224386_168225528_168225677_168236251_168236374_168237285_168237428_168237690_168237796_168244599_168244718_168246417_168246619_168248187_168248293_168250953_168251107_168252508_168252657_168255710_168255870_168260864_168260990_168261999_168262129_168262682_168262788_168267581_168267692_168267840_168267984_168268853_168268970_168272042_168272139_168273278_168273399_168273933_168274084_168275344_168275504_168276014_168276182_168280334_168280591_168283445_168283607_168284819_168284936_168285392_168285499_168287047_168287204_168288173_168288316_168291747_168291907_168293786_168293946_168302299_168302417_168306378_168306721_168308005_168308196_168310997_168311068_168311255_168311366_168318621
transcript_108502.known	chr4	-	6015	38	FSM	ENSG00000137628.18	ENST00000393743.8	6015	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.57026884929054	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGGTCTCATTGTGTTA	0	True	NA	-1	True	AATAAA	-19	NA	168318752	168216293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168217033_168220654_168220718_168221729_168221882_168224242_168224386_168225528_168225677_168236251_168236374_168237285_168237428_168237690_168237796_168246417_168246619_168248187_168248293_168250953_168251107_168252508_168252657_168255710_168255870_168260864_168260990_168261999_168262129_168262682_168262788_168267581_168267692_168267840_168267984_168268853_168268970_168272042_168272139_168273278_168273399_168273933_168274084_168275344_168275504_168276014_168276182_168280334_168280591_168283445_168283607_168284819_168284936_168285392_168285499_168287047_168287204_168288173_168288316_168291747_168291907_168293786_168293946_168302299_168302417_168306378_168306721_168308005_168308196_168310997_168311068_168311255_168311366_168318621
transcript_108503.known	chr4	-	1253	7	FSM	ENSG00000137628.18	ENST00000681832.1	1253	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.13437474581095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTGTGCCATTAAATGA	-2	True	NA	NA	False	AATAAA	-28	NA	168318727	168293627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168293946_168302299_168302417_168306378_168306721_168308005_168308196_168310997_168311068_168311255_168311366_168318621
transcript_108505.known	chr4	-	2652	6	FSM	ENSG00000181381.15	ENST00000515088.5	2652	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.74355957741627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCTTATTTGTATATTT	846	False	NA	NA	False	ATTAAA	-17	NA	168480439	168468747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168470838_168471746_168471937_168472454_168472525_168472695_168472810_168475995_168476121_168480376
transcript_108507.known	chr4	-	623	5	FSM	ENSG00000181381.15	ENST00000513901.1	623	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.58113883008419	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCAGCTAATTTTTGT	-3	True	NA	NA	False	NA	NA	NA	168480491	168470703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168470838_168471746_168471937_168472454_168472525_168472695_168472810_168480376
transcript_108508.nic	chr4	+	1757	11	NIC	ENSG00000129116.19	novel	4392	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	74.3892465346975	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAATTAAAAAAAAAACA	-1	True	NA	-16	True	NA	NA	NA	168832032	168926487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_168832172_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_10851.known	chr1	+	1007	7	FSM	ENSG00000260238.6	ENST00000490491.5	1007	7	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_6	600.64088457432	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCAGTTTATGGAGT	NA	False	NA	30	True	AATAAA	-30	NA	156212981	156243332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_108510.nic	chr4	+	3687	11	NIC	ENSG00000129116.19	novel	4392	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	74.3892465346975	181	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCAGTTTTGTGAAGC	-1	True	NA	-23	True	AATAAA	-15	NA	168832032	168928417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_168832172_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254_168924421_168924944_168925079_168926212
transcript_108511.nic	chr4	+	1315	9	NIC	ENSG00000129116.19	novel	4392	12	NA	NA	5	-1006	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	80.3601269287201	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCACTCACTCACAGCA	-1	True	NA	NA	False	AAGAAA	-6	NA	168832032	168924387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_168832172_168890921_168891058_168894578_168894678_168898492_168898715_168903756_168903907_168913926_168914022_168915894_168916028_168921533_168921742_168924254
transcript_10852.known	chr1	+	852	7	FSM	ENSG00000260238.6	ENST00000368276.8	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	568.924252915584	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGGGTCCCCATCAT	6	True	NA	-39	True	NA	NA	NA	156213006	156243263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156242552_156242592_156242761_156242832_156243032
transcript_108532.nnic	chr4	-	1208	6	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	-72	-2408	at_least_one_novel_splicesite	FALSE	canonical	3	85	junction_2	70.0325638542528	298	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAATGTGTGACAAATTG	3988	False	NA	-14	True	TATAAA	-15	NA	169010347	168989997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_108536.nic	chr4	-	1076	5	NIC	ENSG00000145439.12	novel	1052	5	NA	NA	-72	-30690	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	94.4947088465804	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTAAGTGTTCTCTC	3988	False	NA	-8	True	AGTAAA	-20	NA	169010347	168894482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_168894766_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_108539.nic	chr4	-	936	5	NIC	ENSG00000145439.12	novel	1052	5	NA	NA	-72	-30830	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	94.4947088465804	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCTAGCAGTCGACGAGC	3988	False	NA	-20	True	ATTAAA	-17	NA	169010347	168894622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_168894766_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_108540.known	chr4	-	3440	5	FSM	ENSG00000145439.12	ENST00000306193.8	3440	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	40.9298179815156	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGATGTTAATTTTAT	8	True	NA	-5	True	AATAAA	-19	NA	169010255	168987589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168990329_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_108546.known	chr4	-	1602	4	FSM	ENSG00000145439.12	ENST00000504480.5	1602	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	4.96655480858378	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	9	True	NA	NA	False	NA	NA	NA	169010254	169001168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169002206_169006754_169006892_169007635_169007757_169009947
transcript_108547.nic	chr4	-	2420	10	ISM	ENSG00000154447.15	ENST00000284637.14	5120	12	-88	22010	-88	0	5prime_fragment	FALSE	canonical	3	104	junction_7	11.8133634311129	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACCATACTTACTTAC	0	True	NA	2	True	NA	NA	NA	169271044	169116268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_108552.known	chr4	-	5120	12	FSM	ENSG00000154447.15	ENST00000284637.14	5120	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	12.4774176179698	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCCCTTGTGTCAGT	-4	True	NA	-3	True	ATTAAA	-19	NA	169270956	169094258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169096688_169106846_169107206_169116268_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_108564.known	chr4	-	5653	34	FSM	ENSG00000137601.18	ENST00000439128.6	5653	34	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_18	9.16274646953705	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATATCAATTGTCTTTT	-7	True	NA	-4	True	ATTAAA	-18	NA	169612612	169393274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169394524_169400224_169400358_169400520_169400652_169401651_169401861_169406595_169406748_169424552_169424801_169426145_169426235_169433544_169433666_169438082_169438260_169463242_169463396_169477123_169477353_169477431_169477498_169479402_169479535_169507036_169507133_169507714_169507793_169508247_169508332_169537808_169537912_169555719_169555852_169555931_169556096_169561479_169561555_169561686_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019
transcript_108565.nic	chr4	-	1779	15	ISM	ENSG00000137601.18	ENST00000688653.1	3922	17	-18	2618	-12	-2466	5prime_fragment	FALSE	canonical	3	26	junction_1	8.05751012334177	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGGGTAAGAGGATAAT	7690	False	NA	NA	False	AAGAAA	-2	NA	169612644	169561693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_169561738_169561831_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019_169612144_169612221
transcript_108567.nic	chr4	-	1719	14	ISM	ENSG00000137601.18	ENST00000688653.1	3922	17	-18	2772	-12	-2620	5prime_fragment	FALSE	canonical	3	29	junction_5	7.62431488822392	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAAAAGGATCAGGTAG	7690	False	NA	NA	False	AAAAAG	-5	NA	169612644	169561847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_169561892_169562136_169562197_169576927_169577080_169580841_169580903_169585348_169585550_169587558_169587614_169588648_169588736_169589446_169589515_169590725_169590810_169599099_169599198_169602007_169602105_169602513_169602679_169612019_169612144_169612221
transcript_10857.known	chr1	+	773	6	FSM	ENSG00000260238.6	ENST00000320139.5	773	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	597.404586524074	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGTGAGTCTGTCCA	8	True	NA	19	True	AATAAA	-19	NA	156213008	156243321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156242552_156242592_156242761_156242832_156243032
transcript_108580.nic	chr4	-	712	3	ISM	ENSG00000137601.18	ENST00000692868.1	3650	15	-20	43321	-12	7643	5prime_fragment	FALSE	canonical	3	31	junction_2	5.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATATTTTTAGTTTG	7690	False	NA	NA	False	NA	NA	NA	169612644	169602513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_169602679_169612019_169612144_169612221
transcript_108584.nic	chr4	-	2249	2	FSM	ENSG00000137601.18	ENST00000690685.1	2261	2	-149	161	-12	-161	multi-exon	FALSE	canonical	3	31	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGAAATTCTGGGTC	7690	False	NA	NA	False	AAAAAG	-5	NA	169612644	169610317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169612144_169612221
transcript_108586.known	chr4	+	3635	14	FSM	ENSG00000109572.15	ENST00000347613.8	3635	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	34.2662737220273	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCTCTCTACTGAG	8	False	NA	NA	False	NA	NA	NA	169620525	169720545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169717791_169717868_169719906
transcript_108587.known	chr4	+	6635	13	FSM	ENSG00000109572.15	ENST00000513761.6	6635	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_12	15.7788536409405	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGAGTAGATCATTTAT	15	True	NA	NA	False	AGTAAA	-17	NA	169620577	169723673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
transcript_108588.known	chr4	+	5874	12	FSM	ENSG00000109572.15	ENST00000613795.4	5874	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	36.0834661434516	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTGGCCTTTAATTA	NA	False	NA	10	True	ATTAAA	-16	NA	169660061	169723187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_169660449_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
transcript_10859.known	chr1	+	837	6	FSM	ENSG00000160783.19	ENST00000497069.2	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	599.783494271058	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGAATTTGCTGGAGG	25	False	NA	NA	False	NA	NA	NA	156213025	156239718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156225556_156225669_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_108601.known	chr4	-	1216	8	FSM	ENSG00000056050.7	ENST00000393381.3	1216	8	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_4	67.2175875915869	3274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	20	False	169757964	-9	True	AATAAA	-18	NA	169757944	169729469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169748743_169748843_169750535_169750726_169753675_169753836_169757829
transcript_108604.nnic	chr4	+	732	3	FSM	ENSG00000289508.1	ENST00000691072.1	666	3	-72	6	-72	-6	multi-exon	FALSE	canonical	2	4	junction_1	3.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-3	True	NA	16	True	AATAAA	-16	NA	169940203	169941678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_169940343_169940520_169940661_169941225
transcript_108607.nnic	chr4	+	730	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	-34	-6	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	0.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-20	True	NA	16	True	AATAAA	-16	NA	169940241	169941678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_169940379_169940520_169940661_169941225
transcript_108615.known	chr4	-	667	3	FSM	ENSG00000198948.12	ENST00000504999.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTAGGCTTTAAAGTTG	2	True	NA	NA	False	NA	NA	NA	170026339	170005583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170006011_170006602_170006737_170026233
transcript_108616.known	chr4	-	1505	3	FSM	ENSG00000198948.12	ENST00000393702.7	1505	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTGAGTCACCTCACT	7	True	NA	2	True	AATAAA	-16	NA	170027210	170004990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170006011_170006602_170006737_170026859
transcript_108625.known	chr4	-	2101	14	FSM	ENSG00000109576.14	ENST00000353187.6	2101	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	31.64185678167	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATACCTAAAGGCATCA	-7	True	NA	-14	True	AATAAA	-12	NA	170090221	170060228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_10863.known	chr1	+	1068	5	FSM	ENSG00000160783.19	ENST00000368277.3	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_4	79.9874990232849	4178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCATGCTTCCTCT	6	True	NA	33	True	AATAAA	-21	NA	156213006	156240042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_108633.nnic	chr4	-	902	7	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	-1	-2021	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	72.9278562842911	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	NA	False	NA	-2	True	AATAAA	-30	NA	170091700	170075270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090417_170090532_170091593
transcript_108635.known	chr4	-	810	6	FSM	ENSG00000109576.14	ENST00000507375.5	810	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	59.6925455982571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACGCAAAAAGGAAATCT	1400	False	NA	NA	False	NA	NA	NA	170090296	170073160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090161
transcript_108637.nnic	chr4	-	839	6	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	-5	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	56.6413276680552	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	1395	False	NA	-2	True	AATAAA	-30	NA	170090301	170075270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_108641.nnic	chr4	-	929	5	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	-227	-2021	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	70.4001953122291	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	2075	False	NA	-2	True	AATAAA	-30	NA	170089621	170075270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089260
transcript_108642.known	chr4	-	2250	13	FSM	ENSG00000109576.14	ENST00000337664.9	2250	13	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_9	26.1006332405089	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGGCATCAGACCCAT	8	True	NA	-7	True	AATAAA	-19	NA	170089956	170060221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_108643.known	chr4	-	755	6	FSM	ENSG00000109576.14	ENST00000510340.5	755	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	58.1425833619388	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCCTTACTATTTTCTC	2302	False	NA	NA	False	AATAGA	-3	NA	170089394	170070618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089260
transcript_10865.known	chr1	+	1019	5	FSM	ENSG00000160783.19	ENST00000368279.7	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	524.46615715411	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGAGCATGCTTCCT	-8	True	NA	31	True	AATAAA	-19	NA	156212992	156240040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156239547
transcript_108653.nnic	chr4	+	784	4	NNC	ENSG00000250266.3	novel	1368	4	NA	NA	0	-3207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	189.133697567503	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCCTGTGTTTTCTCCT	NA	False	NA	4	True	AATAAA	-17	NA	170226540	170279832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_170226784_170276581_170276676_170278363_170278572_170279593
transcript_108654.known	chr4	+	786	4	FSM	ENSG00000250266.3	ENST00000665566.1	786	4	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	193.050943190306	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGCTGACCCTTTGACTC	NA	False	NA	8	True	AATAAA	-24	NA	170226540	170283039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_170226784_170276581_170276676_170278943_170279104_170282750
transcript_108656.nnic	chr4	+	1139	4	NNC	ENSG00000250266.3	novel	1569	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	189.589615280538	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170226540	170283723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_170226784_170276581_170276676_170282750_170283251_170283421
transcript_108657.known	chr4	+	1569	4	FSM	ENSG00000250266.3	ENST00000654867.1	1569	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	172.541782379419	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	-3	True	NA	NA	False	AATAAA	-23	NA	170226587	170283723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_170226784_170273658_170273965_170276581_170276676_170282750
transcript_10866.known	chr1	+	884	5	FSM	ENSG00000160783.19	ENST00000368273.8	884	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	602.015988159783	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTCTAGGTTCAG	5	True	NA	NA	False	NA	NA	NA	156213005	156239851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156225556_156225669_156233627_156233729_156236287_156236484_156239547
transcript_108662.known	chr4	+	1316	3	FSM	ENSG00000250266.3	ENST00000667527.2	2474	3	0	1158	0	0	multi-exon	FALSE	canonical	3	391	junction_2	13.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170226534	170283723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_170226784_170276581_170276676_170282750
transcript_108664.nic	chr4	+	1014	3	ISM	ENSG00000250266.3	ENST00000654867.1	1569	4	-38	6668	9	-5984	5prime_fragment	FALSE	canonical	3	23	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTGCCTTTAATAACT	NA	False	NA	NA	False	NA	NA	NA	170226549	170277055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_170226784_170273658_170273965_170276581
transcript_108666.known	chr4	+	1366	3	FSM	ENSG00000250266.3	ENST00000660060.1	1366	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	195.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170259856	170283723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_170260156_170276581_170276676_170282750
transcript_108668.nic	chr4	+	717	2	ISM	ENSG00000250266.3	ENST00000665566.1	786	4	0	5984	0	-5984	5prime_fragment	FALSE	canonical	3	418	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTGCCTTTAATAACT	NA	False	NA	NA	False	NA	NA	NA	170226540	170277055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_170226784_170276581
transcript_10867.known	chr1	+	655	5	FSM	ENSG00000260238.6	ENST00000567140.3	655	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	31.2289929392544	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCTTTCCTCTTCCCC	8	True	NA	-88	True	NA	NA	NA	156213008	156243214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_108681.known	chr4	+	4249	12	FSM	ENSG00000109586.12	ENST00000265000.9	4249	12	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_5	65.5047787039835	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	-1	True	NA	18	True	AATAAA	-19	NA	173168810	173323967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173298114_173298298_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_108696.nnic	chr4	+	596	3	NNC	ENSG00000109586.12	novel	1567	6	NA	NA	-43	-62946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTACTGTGGTACTGAACA	-1	True	NA	NA	False	AATAAA	-20	NA	173168767	173232814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_173168962_173229994_173230034_173232451
transcript_108697.nic	chr4	+	353	2	ISM	ENSG00000109586.12	ENST00000512285.5	1567	6	-50	50240	-50	-47629	5prime_fragment	FALSE	canonical	3	637	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAGAGCACCATGCTG	291	False	NA	NA	False	AATAAA	-13	NA	173168760	173248131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_173168962_173247979
transcript_108698.known	chr4	+	648	4	FSM	ENSG00000109586.12	ENST00000503213.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_2	13.9124245031395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTGCATTTTCCTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	173304018	173318660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_173304119_173313957_173314177_173317633_173317733_173318430
transcript_108712.known	chr4	-	1441	5	FSM	ENSG00000164104.12	ENST00000296503.10	1441	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1069.70238267473	9259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATATATACACATATAT	-4	True	NA	NA	False	NA	NA	NA	173334358	173331375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334271
transcript_108713.known	chr4	-	1175	5	FSM	ENSG00000164104.12	ENST00000446922.6	1175	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	1007.36745406033	14715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-1	True	NA	-17	True	AATAAA	-14	NA	173334391	173331700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334245
transcript_108714.known	chr4	-	1032	4	FSM	ENSG00000164104.12	ENST00000438704.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	29.5108266385218	2909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	19	True	NA	-17	True	AATAAA	-14	NA	173333672	173331700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499
transcript_108715.known	chr4	-	1841	3	FSM	ENSG00000164104.12	ENST00000511316.1	1841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1227	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTCTATTGTCTTTGT	710	False	NA	-21	True	AATAAA	-10	NA	173334432	173331704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173333215_173333499_173333670_173334271
transcript_108718.known	chr4	+	1097	4	FSM	ENSG00000164105.4	ENST00000296504.4	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	20.8326666559997	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCTTCAGTGTATTTA	10	True	NA	NA	False	AATAAA	-15	NA	173370953	173377532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_173371498_173373389_173373516_173373938_173374038_173377204
transcript_108722.known	chr4	-	1026	3	FSM	ENSG00000272870.4	ENST00000609153.2	1026	3	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	5.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	1144	False	NA	-16	True	AATAAA	-13	NA	173370721	173363779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173364199_173369433_173369611_173370291
transcript_108723.known	chr4	-	587	2	FSM	ENSG00000272870.4	ENST00000608794.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTTGTTGCTATGC	-20	True	NA	NA	False	NA	NA	NA	173369815	173363993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173364199_173369433
transcript_108724.known	chr4	+	1643	2	ISM	ENSG00000286039.2	ENST00000652035.2	1777	3	1124	0	-24	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATTATAATGTATATA	-11	True	NA	NA	False	NA	NA	NA	173509632	173511764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_173509843_173510331
transcript_108727.known	chr4	-	1980	6	FSM	ENSG00000164117.14	ENST00000393674.7	1980	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.44522215417857	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGCTTATATGTG	-14	True	NA	3	True	AATAAA	-28	NA	174283667	174236657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174237600_174238993_174239191_174241099_174241219_174259698_174259826_174262763_174263101_174283409
transcript_108729.known	chr4	+	4298	12	FSM	ENSG00000164118.13	ENST00000503780.6	4298	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	27.6913328923577	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTTTCATGCCATT	-5	True	NA	14	True	AATAAA	-15	NA	174283910	174320328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_174283944_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
transcript_108731.known	chr4	+	3824	14	FSM	ENSG00000164118.13	ENST00000396791.7	3824	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	37.083784874143	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTATTTCTCTGTTGA	-11	True	NA	NA	False	AATAAA	-20	NA	174283904	174332293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334_174318666_174318834_174319088_174331481
transcript_108736.known	chr4	+	3290	11	FSM	ENSG00000164118.13	ENST00000457424.6	3290	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	33.8439063939138	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTATTTTATGCAT	-12	True	NA	NA	False	AATAAA	-13	NA	174283903	174333380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174331481
transcript_108744.nic	chr4	+	755	4	ISM	ENSG00000164118.13	ENST00000396791.7	3824	14	4	29889	-2	-1397	5prime_fragment	FALSE	canonical	3	26	junction_1	40.0527430049706	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGTTGGCTATTGT	-7	True	NA	NA	False	AATAAA	-17	NA	174283908	174302404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038
transcript_108747.known	chr4	-	2619	7	FSM	ENSG00000164120.14	ENST00000296522.11	2619	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.95078331845327	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTTTCTTGTATTTTT	-1	True	NA	NA	False	ATTAAA	-21	NA	174522488	174490174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174492095_174493150_174493315_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_108749.known	chr4	-	1171	6	FSM	ENSG00000164120.14	ENST00000296521.11	1171	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.65513337649941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTCTTAGAGTAGTAT	0	True	NA	NA	False	NA	NA	NA	174522487	174491457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174492095_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_108750.known	chr4	-	666	5	FSM	ENSG00000164120.14	ENST00000512410.1	666	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGGATTCTAAATACA	-3	True	NA	NA	False	AATAAA	-19	NA	174522432	174495360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_108751.known	chr4	-	490	3	FSM	ENSG00000249945.2	ENST00000506984.1	490	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTCATTTGTTTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	175466697	175458288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_175458515_175464622_175464724_175466534
transcript_108752.known	chr4	-	2854	8	FSM	ENSG00000150625.17	ENST00000280187.11	2854	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	25.2214680179325	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGTGTATCTGTTTTT	114	False	NA	-2	True	AATAAA	-35	NA	176002332	175632933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_175635058_175640128_175640195_175640752_175640830_175651833_175651988_175673679_175673837_175701574_175701768_175812190_175812250_176002308
transcript_108754.known	chr4	-	1142	6	FSM	ENSG00000150628.7	ENST00000280191.7	1142	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTAGTACAGAATGAGC	-4	True	NA	NA	False	ATTAAA	-38	NA	176195585	176184578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_176184893_176188118_176188236_176192626_176192848_176192957_176193077_176193452_176193583_176195344
transcript_108758.known	chr4	+	4569	5	FSM	ENSG00000129128.13	ENST00000503362.2	4569	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	25.1843205189261	1644	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	-17	True	NA	15	True	AATAAA	-18	NA	176319965	176332245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197
transcript_108759.known	chr4	-	2259	7	FSM	ENSG00000150630.4	ENST00000618562.2	2259	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.62995563967658	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTAAGTTCAGTCCATT	0	True	NA	NA	False	AATAAA	-19	NA	176792922	176683537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_176684041_176687186_176687521_176687820_176687928_176711498_176711651_176727777_176727969_176729532_176729747_176792164
transcript_108760.known	chr4	+	2363	10	FSM	ENSG00000109674.4	ENST00000264596.4	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	11.2051575426477	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAGTCTATTTTTAAA	-1	True	NA	NA	False	ATTAAA	-25	NA	177309873	177362936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379_177351550_177353307_177353729_177360502_177360678_177362288
transcript_108768.known	chr4	-	2037	9	FSM	ENSG00000038002.9	ENST00000264595.7	2037	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	9.98749217771909	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAATTTCAGCTGTTT	3	True	NA	-4	True	AATAAA	-22	NA	177442437	177430773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_177431809_177433213_177433348_177434381_177434490_177436275_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
transcript_108773.known	chr4	-	255	2	FSM	ENSG00000251416.1	ENST00000503093.1	255	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTTGTTCCTCTTTCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	177691068	177686672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_177686864_177691004
transcript_108776.known	chr4	-	539	3	FSM	ENSG00000250993.1	ENST00000512036.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTCGGCATGGTTG	266	False	NA	-7	True	TTTAAA	-18	NA	179465305	179389133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_179389502_179390029_179390090_179465194
transcript_108780.nnic	chr4	-	930	5	NNC	ENSG00000177822.9	novel	1303	4	NA	NA	-11	2019	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.20156211871642	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCAGGTTTTTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	182085142	181973136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_181973313_181980141_181980378_182012661_182012820_182081755_182081827_182084853
transcript_108785.known	chr4	-	1303	4	FSM	ENSG00000177822.9	ENST00000669431.1	1303	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.16024689946929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGGCAGAGCACCCG	NA	False	NA	NA	False	NA	NA	NA	182085131	181979581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_181980378_182012661_182012820_182081755_182081827_182084853
transcript_108788.known	chr4	-	2260	4	FSM	ENSG00000177822.9	ENST00000315302.6	2260	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	7.40870359029762	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAATACTCTAGAA	NA	False	NA	NA	False	NA	NA	NA	182144466	182141649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182143546_182143702_182143845_182144046_182144141_182144338
transcript_10879.known	chr1	-	4559	22	FSM	ENSG00000198952.8	ENST00000361813.5	4559	22	0	0	0	0	multi-exon	TRUE	canonical	3	414	junction_17	45.4447909549963	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTCCTGGTGCCTG	-3	True	NA	-15	True	AATAAA	-15	NA	156282825	156249223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156266540_156266679_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_108790.known	chr4	-	550	3	FSM	ENSG00000177822.9	ENST00000505537.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGTTGCTTATTTCAG	-4	True	NA	NA	False	ATTAAA	-18	NA	182085084	182079628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182079877_182081755_182081827_182084853
transcript_108796.known	chr4	+	1237	4	FSM	ENSG00000218336.9	ENST00000513201.1	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	21.9241115365405	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAACTTTTCACCAGC	24	False	NA	NA	False	AAAACA	-24	NA	182143986	182350316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_182144162_182323945_182324253_182346650_182346930_182349840
transcript_108801.known	chr4	+	651	3	FSM	ENSG00000218336.9	ENST00000512480.5	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTCCTTTTTGGCTT	14	True	NA	NA	False	AAAACA	-19	NA	182144689	182346929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_182144755_182323945_182324253_182346650
transcript_108802.nic	chr4	+	2059	2	ISM	ENSG00000218336.9	ENST00000513201.1	1237	4	-78	24565	-78	-21178	5prime_fragment	FALSE	canonical	3	25	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATTAAAAAAACCC	NA	False	NA	NA	False	NA	NA	NA	182143908	182325751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_182144162_182323945
transcript_108808.known	chr4	-	794	7	FSM	ENSG00000129187.15	ENST00000510370.5	794	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	227.37371342254	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATTATCGTCTTCTAA	221	False	182917412	NA	False	NA	NA	NA	182917389	182891371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916418_182916540_182917287
transcript_108817.known	chr4	-	1928	6	FSM	ENSG00000129187.15	ENST00000438320.7	1928	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	147.510541996157	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTTATGTTATTA	-22	True	NA	-7	True	ATTAAA	-30	NA	182917386	182890090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917310
transcript_108818.known	chr4	-	1829	5	FSM	ENSG00000129187.15	ENST00000500813.6	1829	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	196.923843147548	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTCTGCTCCTGTCC	-5	True	NA	-19	True	NA	NA	NA	182917369	182890059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917287
transcript_108819.known	chr4	-	1931	6	FSM	ENSG00000129187.15	ENST00000357067.7	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_5	79.3332212884363	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-15	True	NA	-20	True	ATTAAA	-17	NA	182917379	182890103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917287
transcript_108820.known	chr4	-	879	5	FSM	ENSG00000129187.15	ENST00000507631.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	209.437341465174	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGTGTTCTTAATGGG	214	False	182917412	-16	True	AATAAA	-6	NA	182917396	182891013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917310
transcript_108821.known	chr4	+	2646	3	FSM	ENSG00000168564.6	ENST00000302350.4	2646	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	29.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTTTTTCTCCAA	-1	True	NA	20	True	ATTAAA	-30	NA	183444634	183448198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183445070_183445534_183445635_183446087
transcript_108824.known	chr4	+	3542	3	FSM	ENSG00000168564.6	ENST00000504169.2	3542	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	30	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGGTTTGGTAATTTC	0	True	NA	NA	False	AATAAA	-19	NA	183444635	183449064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183445070_183445534_183445666_183446087
transcript_108826.known	chr4	+	888	3	FSM	ENSG00000168564.6	ENST00000506835.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGAGCACTTCCCAG	400	False	NA	NA	False	AATACA	-11	NA	183445175	183446759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183445292_183445534_183445635_183446087
transcript_108828.known	chr4	+	860	2	FSM	ENSG00000168564.6	ENST00000510928.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCATCACCCGTTTT	-2	True	NA	NA	False	NA	NA	NA	183444696	183446021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183445070_183445534
transcript_108829.known	chr4	+	2458	2	FSM	ENSG00000168556.7	ENST00000302327.4	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTGTCCTTCATTCT	-3	True	NA	NA	False	NA	NA	NA	183505057	183512429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183505368_183510281
transcript_108830.known	chr4	+	599	2	FSM	ENSG00000168556.7	ENST00000412117.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAAATCCAAGTC	1021	False	NA	NA	False	NA	NA	NA	183506081	183510643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183506319_183510281
transcript_108831.known	chr4	+	634	1	FSM	ENSG00000272744.1	ENST00000608204.1	634	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTAGTGCTTGACTTC	NA	False	NA	6	True	AATAAA	-14	NA	183516893	183517527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183516900_183517500
transcript_108833.known	chr4	-	1620	8	FSM	ENSG00000182552.15	ENST00000510702.5	1620	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	75.1963416391939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATTTATCTGCTGTTG	9	True	NA	NA	False	AATAAA	-1	NA	183659201	183640627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651324_183655880_183655962_183658928
transcript_108834.known	chr4	-	2590	7	FSM	ENSG00000182552.15	ENST00000327570.13	2590	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.3994645226066	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACACATTTTATT	1	True	NA	-1	True	AATAAA	-20	NA	183659178	183639635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651328_183655880_183655962_183658928
transcript_108842.known	chr4	-	1393	7	FSM	ENSG00000182552.15	ENST00000512740.1	1393	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	78.9847031603799	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCTTTCTTAAAACATT	54	False	NA	NA	False	AATACA	-27	NA	183659156	183640728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651324_183658928
transcript_108843.known	chr4	-	1551	6	FSM	ENSG00000182552.15	ENST00000510968.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.574047569033	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGCTGAACTGTTA	59	False	NA	NA	False	NA	NA	NA	183659151	183640459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183658928
transcript_108846.known	chr4	+	4435	31	FSM	ENSG00000168538.16	ENST00000357207.8	4435	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_29	37.7287983140495	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGTCTCTATCTTTT	NA	False	NA	15	True	AATAAA	-21	NA	183659266	183713594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708417_183708535_183708575_183712599
transcript_108848.known	chr4	+	4523	30	FSM	ENSG00000168538.16	ENST00000334690.11	4523	30	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_19	18.2479943679907	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTCTGTCTCTAT	-17	True	NA	10	True	AATAAA	-16	NA	183659292	183713589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
transcript_108851.known	chr4	+	1055	3	FSM	ENSG00000173320.12	ENST00000506529.1	1055	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTCAGAGTATTGC	NA	False	NA	NA	False	AAAACA	-6	NA	184010772	184017443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_184011424_184011586_184011636_184017088
transcript_108852.known	chr4	+	10507	4	FSM	ENSG00000173320.12	ENST00000308497.9	10507	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.09120616516523	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAAGTGGATTTTTTT	-11	True	NA	13	True	ATTAAA	-16	NA	183905306	184023526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183906957_184001324_184001478_184009157_184011424_184017088
transcript_10886.nnic	chr1	-	1457	6	NNC	ENSG00000198715.13	novel	1611	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_4	197.612347792338	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	NA	False	NA	-5	True	AATAGA	-20	NA	156295699	156292687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294675_156294760_156295525
transcript_108864.known	chr4	-	2257	9	FSM	ENSG00000168310.11	ENST00000393593.8	2257	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	8.02729717900116	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGGGCATCACTCC	-13	True	NA	-17	True	AATAAA	-22	NA	184474550	184387728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184389067_184390702_184390750_184398914_184399080_184408157_184408276_184418166_184418214_184418531_184418709_184419468_184419569_184428977_184429071_184474378
transcript_108869.nic	chr4	-	594	4	ISM	ENSG00000168310.11	ENST00000512020.5	731	6	-48	10367	-46	-351	5prime_fragment	FALSE	canonical	3	57	junction_2	3.74165738677394	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTTACAGACTAAAATAA	NA	False	NA	NA	False	AAGAAA	-8	NA	184474596	184418525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_184418709_184419468_184419569_184428977_184429071_184474378
transcript_108874.known	chr4	-	2645	8	FSM	ENSG00000164305.19	ENST00000308394.9	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	336.723225531363	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-2	True	NA	-2	True	AATATA	-19	NA	184649447	184627695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_108879.known	chr4	-	2540	7	FSM	ENSG00000164305.19	ENST00000523916.5	2540	7	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_3	86.1890686546476	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	NA	False	NA	-2	True	AATATA	-19	NA	184649509	184627695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_108881.known	chr4	-	964	7	FSM	ENSG00000164305.19	ENST00000517513.5	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	389.662104335995	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTTTTAGTTTGTAT	-2	True	NA	NA	False	ACTAAA	-16	NA	184649447	184629255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_108882.known	chr4	-	677	6	FSM	ENSG00000164305.19	ENST00000393588.8	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	318.339190172998	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGGCAACAGAATTTG	-10	False	NA	NA	False	NA	NA	NA	184649455	184629383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_108890.known	chr4	+	2164	14	FSM	ENSG00000164306.11	ENST00000314970.11	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	10.6798488564976	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGAAATCGCCTTAT	-9	True	NA	5	True	ATTAAA	-19	NA	184649737	184694952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_184649909_184652022_184652101_184657081_184657321_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_108891.known	chr4	+	2007	13	FSM	ENSG00000164306.11	ENST00000515774.5	2007	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	14.5342029556338	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCCTTATTAATTAATCAA	-5	True	NA	16	True	ATTAAA	-30	NA	184649666	184694963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_184649909_184652022_184652101_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_108892.known	chr4	-	2494	13	FSM	ENSG00000151725.12	ENST00000281453.10	2494	13	0	0	0	0	multi-exon	FALSE	canonical	3	1165	junction_8	107.525061678145	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTGGATTGTATATTA	-14	True	NA	-4	True	ATTAAA	-15	NA	184734096	184694084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184695402_184697646_184697804_184700819_184700882_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_108893.known	chr4	-	1549	12	FSM	ENSG00000151725.12	ENST00000510146.5	1549	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	386.634386417363	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTGAACATAATTTT	0	True	NA	-14	True	AATAAA	-14	NA	184734130	184695001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184695402_184697646_184697804_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_108894.known	chr4	-	688	6	FSM	ENSG00000151725.12	ENST00000514781.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	526.582719048014	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACGTCTGCCATCCC	716	False	NA	0	True	AATAGA	-11	NA	184733414	184716396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184733297
transcript_108896.known	chr4	-	3712	21	FSM	ENSG00000151726.15	ENST00000281455.7	3712	21	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_20	10.2150624080326	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCATCTTTTTTAATG	-1	True	NA	-3	True	AATAAA	-21	NA	184825968	184755594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184757266_184757634_184757707_184757818_184757921_184760356_184760501_184762406_184762524_184763166_184763256_184764852_184764926_184765890_184765987_184766621_184766757_184768315_184768451_184770398_184770477_184773080_184773155_184773662_184773715_184773842_184773876_184776483_184776663_184776883_184776984_184780331_184780434_184783926_184783992_184788616_184788732_184803319_184803547_184825915
transcript_108899.known	chr4	+	4415	4	FSM	ENSG00000151729.11	ENST00000281456.11	4415	4	0	0	0	0	multi-exon	FALSE	canonical	3	1716	junction_3	60.8604962188118	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCACAAATTCTTT	0	True	NA	1	True	AATAAA	-14	NA	185143265	185150382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185143484_185144763_185145251_185145758_185145900_185146813
transcript_108900.known	chr4	+	1666	4	FSM	ENSG00000151729.11	ENST00000491736.1	1666	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	841.299127672329	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAACATCAATAAAGACC	12	False	NA	-24	True	NA	NA	NA	185143277	185147241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185143484_185144763_185145251_185145354_185145900_185146813
transcript_108903.known	chr4	+	3151	18	FSM	ENSG00000109762.17	ENST00000618785.4	3151	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.8077128242925	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACAGTGCTCTATGATA	NA	False	NA	NA	False	AATAAA	-12	NA	185204236	185363964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185204468_185247293_185247379_185258847_185259065_185264437_185264611_185266968_185267156_185288011_185288083_185310634_185310817_185320732_185320865_185323527_185323801_185332594_185332760_185339378_185339511_185341975_185342117_185346536_185346651_185353484_185353603_185357670_185357738_185361923_185362106_185362610_185362712_185363384
transcript_108908.known	chr4	-	4851	5	FSM	ENSG00000164323.15	ENST00000458385.7	4851	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	18.7266521300525	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTTGATCCTATGTT	-28	True	NA	-3	True	AATAAA	-15	NA	185204000	185159664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185162926_185164028_185164180_185175785_185176052_185190142_185191213_185203897
transcript_108910.known	chr4	-	903	3	NNC	ENSG00000164323.15	novel	4851	5	NA	NA	35	-233	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	121	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGATCAAAAAGTGAAAA	7	True	NA	NA	False	NA	NA	NA	185203965	185190375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_185191048_185191049_185191213_185203897
transcript_108912.known	chr4	-	2895	4	FSM	ENSG00000164323.15	ENST00000514798.1	2895	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.624301955378	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTGTAAGTAGCTCAA	6622	False	NA	NA	False	AATAAA	-22	NA	185204028	185169025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185170341_185175785_185176052_185190142_185191213_185203784
transcript_108918.known	chr4	-	2361	12	FSM	ENSG00000109775.11	ENST00000264689.11	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	22.1825633257854	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTTAAGTCTTTTT	1	True	NA	NA	False	CATAAA	-34	NA	185425964	185399536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_108919.known	chr4	-	2348	12	FSM	ENSG00000109775.11	ENST00000514247.5	2348	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	64.2965752336535	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAACTTAAGTCTT	-14	True	NA	NA	False	CATAAA	-31	NA	185425979	185399539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418611_185418771_185422484_185422564_185425865
transcript_10892.known	chr1	+	2191	4	FSM	ENSG00000163472.19	ENST00000295694.9	2191	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.85861230093008	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	17	False	NA	13	True	AATAAA	-13	NA	156282947	156292443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156283066_156285183_156285984_156286259_156286474_156291384
transcript_108921.known	chr4	-	1672	12	FSM	ENSG00000109775.11	ENST00000510755.5	1672	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	66.0740881432876	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTAATTTTTCACATTA	-4	True	NA	-50	True	AATAAA	-5	NA	185425969	185400333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405960_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_108922.nic	chr4	-	1544	12	NIC	ENSG00000109775.11	novel	592	6	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	64.8809462791862	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGTGTTCATTCCATTC	NA	False	NA	1	True	AATATA	-23	NA	185426006	185402261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_185402345_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_10893.nnic	chr1	-	548	3	NNC	ENSG00000198715.13	novel	543	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	11	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTGTGTTCCATTGT	4106	False	NA	-5	True	TATAAA	-24	NA	156291564	156290088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_156290361_156290992_156291107_156291402
transcript_108932.known	chr4	+	784	5	FSM	ENSG00000186352.9	ENST00000335174.6	784	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	4.33012701892219	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTCCGTGCAGTATT	-2	True	NA	12	True	ATTAAA	-16	NA	185396840	185400241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185396951_185397149_185397303_185398936_185399029_185399569_185399774_185400016
transcript_108938.known	chr4	-	2872	7	FSM	ENSG00000168491.10	ENST00000307588.8	2872	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1.86338998124982	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAAACAATTTTTTCTT	-8	True	NA	NA	False	AATAAA	-27	NA	185471733	185445181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185445543_185458125_185460239_185461048_185461160_185462642_185462709_185462993_185463050_185470944_185471050_185471673
transcript_108939.known	chr4	-	2658	7	FSM	ENSG00000154553.16	ENST00000284771.7	2658	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	10.3708994574027	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGTATCCAAAATACAT	-1	True	NA	NA	False	AATAAA	-24	NA	185535507	185500659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_10894.known	chr1	-	543	3	FSM	ENSG00000198715.13	ENST00000497831.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGCTGCAGTGTGTT	4120	False	NA	-12	True	TATAAA	-17	NA	156291550	156290095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156290361_156290976_156291107_156291402
transcript_108945.known	chr4	-	2819	5	FSM	ENSG00000154553.16	ENST00000504011.5	2819	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	21.8460522749535	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATAAGAGTGCCCCCA	146	False	NA	NA	False	NA	NA	NA	185535491	185512093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185514338_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_108946.known	chr4	-	705	5	FSM	ENSG00000168491.10	ENST00000507501.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.78535710713571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATCCAAAATTACTGTG	2	True	NA	NA	False	NA	NA	NA	185471103	185459925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185462993_185463050_185470944
transcript_10895.known	chr1	-	524	2	FSM	ENSG00000198715.13	ENST00000480968.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATTTTTTTGTATTTT	-1	True	NA	NA	False	NA	NA	NA	156291506	156290686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156291107_156291402
transcript_108951.known	chr4	-	544	4	FSM	ENSG00000168491.10	ENST00000506962.3	544	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCTTCAGAAAATTCTGA	1	True	NA	NA	False	NA	NA	NA	185471104	185460031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185470944
transcript_108956.known	chr4	-	622	3	FSM	ENSG00000154553.16	ENST00000515261.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCATCAGAAAGAATTTGG	-1	True	NA	NA	False	AAAAAG	-43	NA	185535507	185523142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185523447_185525019_185525172_185535341
transcript_108957.nnic	chr4	+	799	2	NNC	ENSG00000205129.9	novel	785	5	NA	NA	-253	-9416	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-22	NA	185425995	185426894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_185426081_185426180
transcript_108958.known	chr4	+	394	2	FSM	ENSG00000249679.3	ENST00000512874.2	530	2	101	35	21	-35	multi-exon	FALSE	canonical	3	30	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGGAAGCGACGGTGG	7	False	NA	7	True	ATTAAA	-15	NA	185471515	185472263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185471761_185472114
transcript_108960.known	chr4	+	1333	8	FSM	ENSG00000205129.9	ENST00000378850.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	4.23300925429402	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGTTGTTGATTTATG	2	True	NA	7	True	AATAAA	-17	NA	185426253	185449826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185426397_185429333_185429512_185431981_185432202_185436045_185436184_185436283_185436360_185440539_185440720_185444963_185445131_185449595
transcript_10897.known	chr1	-	1611	6	FSM	ENSG00000198715.13	ENST00000362007.6	1611	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	68.0352849630249	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-9	True	NA	-5	True	AATAGA	-20	NA	156295679	156292687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_108970.nic	chr4	-	1930	12	NIC	ENSG00000154556.18	novel	1790	12	NA	NA	-23	164	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	32.6645864295198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGAAAGAAAAAAAAAATCA	421	False	185775495	NA	False	AAGAAA	-3	NA	185775474	185645413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_185646072_185646667_185646783_185649466_185649657_185651783_185651829_185652661_185652729_185657423_185657597_185662103_185662243_185678422_185678548_185678795_185678823_185684753_185684847_185690561_185690612_185775226
transcript_10898.known	chr1	-	1364	5	FSM	ENSG00000198715.13	ENST00000622703.4	1364	5	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_4	130.34833140474	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-19	True	NA	-4	True	AATAGA	-21	NA	156295689	156292686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156295525
transcript_108987.nnic	chr4	-	1213	3	NNC	ENSG00000154556.18	novel	598	3	NA	NA	4	27085	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGTAAACTTCACT	377	False	NA	NA	False	AAAAAG	-5	NA	185775518	185729956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_185730822_185734098_185734155_185775226
transcript_10899.known	chr1	-	1365	5	FSM	ENSG00000198715.13	ENST00000612353.4	1365	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	151.763590824677	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-19	True	NA	-4	True	AATAGA	-21	NA	156295689	156292686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156293210_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_108991.known	chr4	-	4964	2	FSM	ENSG00000154556.18	ENST00000462661.1	4964	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAACGATGAAAATGC	886	False	NA	NA	False	NA	NA	NA	185812239	185770978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185775367_185811663
transcript_108994.known	chr4	+	2942	2	FSM	ENSG00000164342.13	ENST00000512264.1	2942	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTCCTTATTTCAGGC	NA	False	NA	-69	True	NA	NA	NA	186081610	186085024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_186084173_186084644
transcript_10900.known	chr1	-	1858	15	FSM	ENSG00000163468.15	ENST00000472765.6	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_13	1172.64908760168	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTCTCCCCTTTTCCT	11	True	NA	NA	False	NA	NA	NA	156338257	156309164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337676_156337790_156338153
transcript_109045.nnic	chr4	-	811	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_2	78.5	588	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247379	186241993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_186242333_186245315_186245479_186247070
transcript_109053.nnic	chr4	-	421	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	145	junction_1	0	1572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247369	186241993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_186242330_186247284
transcript_109055.nnic	chr4	-	729	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	540	junction_1	0	5330	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	NA	False	NA	-1	True	ATTAAA	-22	NA	186247460	186241993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_186242333_186247070
transcript_109057.nnic	chr4	-	685	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	297	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	NA	False	NA	-7	True	ATTAAA	-16	NA	186247429	186241999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_186242326_186247070
transcript_109060.known	chr4	-	1852	2	FSM	ENSG00000083857.15	ENST00000509647.1	1852	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGATGAGGGTGAGAAC	598	False	NA	NA	False	NA	NA	NA	186726722	186708362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_186709846_186726353
transcript_109064.known	chr4	+	432	1	FSM	ENSG00000272218.1	ENST00000606881.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCGTATTTGGTATTCAT	28	False	NA	7	True	AATAAA	-16	NA	186892551	186892983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_186892600_186893000
transcript_109065.known	chr4	+	674	2	FSM	ENSG00000213331.4	ENST00000508231.1	674	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGAGAAGTTGGTG	NA	False	NA	NA	False	AAGAAA	-28	NA	187970272	187971284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_187970489_187970826
transcript_109069.known	chr4	+	2647	4	FSM	ENSG00000179059.10	ENST00000326866.5	2647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	244.965303665642	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGCCAAGTCTGTAT	-6	True	NA	38	True	ATTAAA	-16	NA	187995770	188005046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_187995841_187999107_187999274_187999608_187999686_188002712
transcript_109072.known	chr4	+	2480	3	FSM	ENSG00000179059.10	ENST00000509524.5	2480	3	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	83.5	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	-6	True	NA	37	True	ATTAAA	-15	NA	187995770	188005045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_187995841_187999608_187999686_188002712
transcript_109078.nnic	chr4	+	2429	2	NIC	ENSG00000179059.10	novel	2647	4	NA	NA	-21	4	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCAAGTCTGTATTTTA	1663	False	NA	42	True	ATTAAA	-20	NA	187995749	188005050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_187995841_188002712
transcript_109084.nic	chr4	-	2111	8	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	30.8888725754048	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	NA	False	NA	-24	True	AATAAA	-14	NA	188109719	188091271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
transcript_109085.known	chr4	-	1998	8	FSM	ENSG00000179046.9	ENST00000682553.1	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	31.1985085985774	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	3	True	NA	-24	True	AATAAA	-14	NA	188109603	188091271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105591_188109242
transcript_109096.known	chr4	+	1139	6	FSM	ENSG00000249378.7	ENST00000667802.1	1139	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	10.2097992144802	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACTTCTCATCACTGTAA	2	True	NA	NA	False	AATAAA	-20	NA	188455580	188486620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188486095
transcript_109097.known	chr4	+	2435	6	FSM	ENSG00000249378.7	ENST00000510832.5	2435	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.7144761887831	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTTTGTGGTGAAATA	-1	True	NA	NA	False	AATAAA	-19	NA	188455577	188538552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188536734
transcript_109098.known	chr4	+	1015	6	FSM	ENSG00000249378.7	ENST00000666759.1	1015	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.7144761887831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTATTCATTGATACGA	1338	False	NA	NA	False	AATAAA	-17	NA	188455553	188541508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188541134
transcript_10910.known	chr1	+	595	4	FSM	ENSG00000163467.12	ENST00000368254.6	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	2.94392028877595	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTGTGTTGTTTTCCTC	-3	True	NA	NA	False	AGTAAA	-17	NA	156338525	156346995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346767
transcript_109101.known	chr4	+	750	6	FSM	ENSG00000249378.7	ENST00000667271.1	750	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	9.74474217206387	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATGATAAGGTTTGATG	2	True	NA	7	True	ATTAAA	-20	NA	188455580	188601903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778_188485866_188601767
transcript_109103.nnic	chr4	+	685	6	NNC	ENSG00000249378.7	novel	750	6	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.4087685575613	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGGTTTGATGTGCTA	1321	False	NA	12	True	ATTAAA	-25	NA	188455536	188601908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_188455675_188456663_188456763_188476697_188476757_188477751_188477913_188485778_188485866_188601767
transcript_109106.known	chr4	+	1198	5	FSM	ENSG00000249378.7	ENST00000655286.1	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	9.06917857360853	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCAAACCTGATTTCTC	1336	False	NA	NA	False	AATAAA	-15	NA	188455551	188486420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188477637_188477913_188485778
transcript_109108.known	chr4	+	700	5	FSM	ENSG00000249378.7	ENST00000662888.1	700	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	11.7686022959398	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTCTCATACTACTT	1338	False	NA	NA	False	AATAAA	-24	NA	188455553	188486429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188485778_188485866_188486095
transcript_109109.known	chr4	+	713	5	FSM	ENSG00000249378.7	ENST00000666634.1	713	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.2983738762488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTATTCATTGATACGA	2	True	NA	NA	False	AATAAA	-17	NA	188455580	188541508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188485778_188485866_188541134
transcript_10911.known	chr1	+	601	4	FSM	ENSG00000163467.12	ENST00000470342.5	601	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.78423336480244	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTATTGTGTTGTTTTCC	-22	True	NA	NA	False	AGTAAA	-15	NA	156338506	156346993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346778
transcript_109110.known	chr4	+	608	5	FSM	ENSG00000249378.7	ENST00000657654.1	608	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.2983738762488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACTGCAACCAGTCTGG	1338	False	NA	NA	False	NA	NA	NA	188455553	188586952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188485778_188485866_188586710
transcript_109111.known	chr4	+	468	5	FSM	ENSG00000249378.7	ENST00000510005.6	526	5	56	2	12	-2	multi-exon	FALSE	canonical	1	4	junction_4	11.2805141726785	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGGTTTGATGTGCTA	14	False	NA	12	True	ATTAAA	-25	NA	188455592	188601908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188485778_188485866_188601767
transcript_109118.known	chr4	+	1240	4	FSM	ENSG00000249378.7	ENST00000667003.2	2129	4	29	860	0	-858	multi-exon	FALSE	canonical	0	0	junction_3	13.9283882771841	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAACACATAGAGTATTG	2	True	NA	NA	False	AATACA	-29	NA	188455580	188537694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188485778_188485866_188536734
transcript_10912.known	chr1	+	512	4	FSM	ENSG00000163467.12	ENST00000368253.6	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.55902608401044	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTATTGTGTTGTTT	-26	True	NA	NA	False	AGTAAA	-12	NA	156338502	156346990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156338606_156339734_156339792_156344579_156344709_156346767
transcript_109121.known	chr4	+	443	4	FSM	ENSG00000249378.7	ENST00000503458.7	464	4	15	6	0	-2	multi-exon	FALSE	canonical	1	4	junction_3	12.657891697365	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGGTTTGATGTGCTA	1343	False	NA	12	True	ATTAAA	-25	NA	188455558	188601908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188485778_188485866_188601767
transcript_109122.known	chr4	+	722	4	FSM	ENSG00000249378.7	ENST00000664177.1	722	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.9283882771841	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAAACTGTTGTGTATT	1315	False	NA	NA	False	TATAAA	-23	NA	188455530	188680674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188485778_188485866_188680282
transcript_109125.known	chr4	+	798	5	FSM	ENSG00000249378.7	ENST00000656246.1	798	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.2983738762488	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATAAGGACTTCTTTTT	1343	False	NA	NA	False	AATAAA	-18	NA	188455558	188587127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188485778_188485866_188586690
transcript_109126.known	chr4	+	717	4	FSM	ENSG00000249378.7	ENST00000663631.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.9283882771841	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATAAGGACTTCTTTTT	2	True	NA	NA	False	AATAAA	-18	NA	188455580	188587127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188485778_188485866_188586690
transcript_109127.known	chr4	+	837	3	FSM	ENSG00000249378.7	ENST00000667883.1	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAACCTGATTTCTCAT	2	True	NA	NA	False	AATAAA	-17	NA	188455580	188486422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188485778
transcript_109129.known	chr4	+	978	9	FSM	ENSG00000109536.12	ENST00000226798.9	978	9	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_8	47.4893080071715	1957	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTACAGAGTTCTTGA	-34	True	NA	42	True	AATAAA	-15	NA	189940871	189963192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747_189960840_189961821_189961933_189963092
transcript_109144.nic	chr5	+	2810	11	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-60	32856	-60	0	5prime_fragment	TRUE	canonical	3	161	junction_3	33.1246132052889	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	NA	False	NA	18	True	AATAAA	-29	NA	92107	157110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_109156.nnic	chr5	+	1061	6	NIC	ENSG00000153404.15	novel	12591	20	NA	NA	-60	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	89.3053189905282	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	NA	False	NA	18	True	AATAAA	-29	NA	92107	157110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_92277_113250_113449_154874_154992_155344_155444_156070_156211_156772
transcript_109162.known	chr5	-	9283	3	FSM	ENSG00000164366.4	ENST00000296824.4	9283	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	20.5	788	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTACTTCTTTT	-4	True	NA	NA	False	NA	NA	NA	218153	196867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_205959_216728_216860_218092
transcript_109169.known	chr5	+	2693	15	FSM	ENSG00000073578.18	ENST00000264932.11	2693	15	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	49.6243028018674	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCCTTGTAGTT	-2	True	NA	NA	False	NA	NA	NA	218319	257082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_109176.known	chr5	+	2067	13	FSM	ENSG00000073578.18	ENST00000504309.5	2067	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_11	136.606770411361	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	0	True	NA	NA	False	AATAAA	-16	NA	218302	256682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_254392_254507_256333
transcript_109182.known	chr5	+	1430	9	FSM	ENSG00000073578.18	ENST00000504824.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	47.5703426516984	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTAGTAAATTGTCAG	20	False	NA	NA	False	TTTAAA	-41	NA	218370	235524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143
transcript_109189.known	chr5	+	3665	24	FSM	ENSG00000286001.1	ENST00000651543.1	3665	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	276.369448082903	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATGTTAGACGTGTG	NA	False	NA	5	True	AAAAAG	-41	NA	218297	314955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333_256456_263700_263815_264322_264386_270734_270855_271410_271822_272710_272773_304176_304222_306601_306761_311292_311403_313700_313851_314416
transcript_109190.nic	chr5	+	884	6	ISM	ENSG00000073578.18	ENST00000504824.5	1430	9	-78	7140	-10	-2507	5prime_fragment	FALSE	canonical	3	467	junction_4	31.9186465878489	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAGTTTCTTTATTTTA	NA	False	NA	NA	False	AATAAA	-6	NA	218292	228384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184
transcript_109192.known	chr5	+	1088	6	FSM	ENSG00000249915.9	ENST00000507528.5	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_4	262.262921511982	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	-5	True	NA	19	True	AATAAA	-13	NA	271656	314969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306755_311292_311403_314416
transcript_109193.known	chr5	+	1110	6	FSM	ENSG00000249915.9	ENST00000264933.9	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_4	100.246895213767	2017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	-16	True	NA	24	True	AATAAA	-18	NA	271645	314974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306761_311292_311403_314416
transcript_109196.known	chr5	+	1073	5	NIC	ENSG00000249915.9	novel	1050	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	297.619303809414	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	-3	True	NA	24	True	AATAAA	-18	NA	271620	314974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_271822_304176_304222_306601_306761_311292_311403_314416
transcript_109203.known	chr5	+	672	4	FSM	ENSG00000249915.9	ENST00000505221.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	361.36254494467	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCTGGTTCTATA	-15	True	NA	1	True	NA	NA	NA	271646	314806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_304176_304222_314416
transcript_109204.known	chr5	+	931	4	FSM	ENSG00000249915.9	ENST00000618970.4	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	347.39059029027	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	-3	True	NA	24	True	AATAAA	-18	NA	271620	314974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_311292_311403_314416
transcript_109205.known	chr5	+	1156	3	FSM	ENSG00000249915.9	ENST00000509581.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	383	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-5	True	NA	13	True	AATAAA	-14	NA	271656	276940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_276011
transcript_109207.known	chr5	-	522	2	FSM	ENSG00000248925.2	ENST00000512642.2	1075	2	0	553	0	-553	multi-exon	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGTCTCTTCATAAAGT	NA	False	NA	NA	False	NA	NA	NA	271516	269857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_270208_271344
transcript_109208.known	chr5	-	1663	1	FSM	ENSG00000221990.5	ENST00000623673.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTTATTGGCTGGGCGC	NA	False	NA	NA	False	NA	NA	NA	443160	441497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_441500_443200
transcript_109209.known	chr5	+	2801	13	FSM	ENSG00000180104.16	ENST00000512944.6	2801	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	31.1884950297738	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	-7	True	NA	11	True	ATTAAA	-24	NA	443175	467290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_10921.known	chr1	-	1977	14	FSM	ENSG00000163468.15	ENST00000295688.8	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	3026	junction_10	209.514400516214	18464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-24	True	NA	-21	True	ATTAAA	-15	NA	156338292	156308967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_109214.nnic	chr5	+	2763	13	NNC	ENSG00000180104.16	novel	2801	13	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.6190028915539	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	-10	True	NA	11	True	ATTAAA	-24	NA	443172	467290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_443250_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_10922.known	chr1	-	1815	12	FSM	ENSG00000163468.15	ENST00000368259.6	1815	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	955.14318947302	1898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	23	True	NA	-22	True	ATTAAA	-14	NA	156338245	156308968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156335826_156335889_156338153
transcript_109223.known	chr5	+	2682	12	FSM	ENSG00000180104.16	ENST00000315013.9	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_6	24.0794140671691	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATGAAAACGCCATGCA	-3	True	NA	6	True	ATTAAA	-19	NA	446148	467285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_109225.known	chr5	+	2366	12	FSM	ENSG00000112877.8	ENST00000264935.6	2366	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	15.0453858828425	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	-6	True	NA	17	True	AATAAA	-21	NA	612339	653553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
transcript_10923.known	chr1	-	2048	15	FSM	ENSG00000163468.15	ENST00000368262.7	2048	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1174.72006435229	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCATTTAGTTTGCTT	21	True	NA	-67	True	NA	NA	NA	156338247	156309013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337078_156337241_156338153
transcript_109231.known	chr5	-	2843	16	FSM	ENSG00000028310.18	ENST00000495265.5	2843	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	74.9647620923028	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	-1	True	NA	-20	True	CATAAA	-17	NA	892800	863740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_864569_865413_865582_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886768_887360_887472_889020_889166_889586_889767_891154_891288_891639_891855_892605
transcript_109233.known	chr5	-	3477	19	FSM	ENSG00000028310.18	ENST00000490814.6	3477	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.533170140956	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTGAGTGCCCATTT	1002	False	NA	-20	True	CATAAA	-17	NA	891797	863740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_864569_865413_865582_868606_869120_869244_869405_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883350_883451_883937_884071_886591_886708_887360_887472_888234_888408_889020_889166_889586_889767_891154_891288_891639
transcript_109234.known	chr5	-	3170	17	FSM	ENSG00000028310.18	ENST00000489816.5	3170	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.1285482398937	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTTACTGAGTGCCC	277	False	NA	-24	True	CATAAA	-13	NA	892522	863744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_864569_865413_865582_869244_869395_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886708_887360_887472_889020_889166_889586_889767_891154_891288_891639_891855_892086
transcript_109235.known	chr5	-	1417	11	FSM	ENSG00000028310.18	ENST00000466684.5	1417	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	88.8396870773417	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCAGGTGGGCTGCACT	-11	True	NA	NA	False	NA	NA	NA	892559	876108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_876213_878354_878488_879793_879890_883937_884071_886591_886708_887360_887472_889020_889166_889586_889767_891154_891288_891639_891855_892508
transcript_109236.nic	chr5	-	285	2	ISM	ENSG00000028310.18	ENST00000495265.5	2843	16	65	27959	65	-2657	5prime_fragment	FALSE	canonical	3	195	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAGAAGTCCGAGAA	64	False	NA	-56	True	AAAAAG	-4	NA	892735	891699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_891855_892605
transcript_10924.known	chr1	-	1885	13	FSM	ENSG00000163468.15	ENST00000368258.7	1885	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	926.393260026336	1808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	5	True	NA	-22	True	ATTAAA	-14	NA	156338263	156308968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156338153
transcript_109240.known	chr5	+	2431	13	FSM	ENSG00000071539.14	ENST00000166345.8	2431	13	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	30.7411911502032	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCCTGATTTATGGT	-4	True	NA	88	True	ACTAAA	-23	NA	892883	918120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354_908462_911842_911997_914464_914578_915903_915974_917007
transcript_109244.known	chr5	+	1452	9	FSM	ENSG00000071539.14	ENST00000512024.5	1452	9	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	37.0790961998806	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGACAGAGCAAGACTCC	-4	True	NA	NA	False	NA	NA	NA	892883	908932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354
transcript_109245.known	chr5	-	2492	17	FSM	ENSG00000049656.14	ENST00000320895.10	2492	17	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_14	76.2757128776913	862	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAAGCCTTTGAGTCA	-5	True	NA	-16	True	ATTAAA	-20	NA	1345099	1317751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339006_1341670_1341861_1344350_1344452_1344679
transcript_109249.known	chr5	-	3945	14	FSM	ENSG00000153395.10	ENST00000283415.4	3945	14	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_2	75.8339824841626	964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGTTTTGTGTGGTT	-14	True	NA	-4	True	AGTAAA	-23	NA	1523960	1461426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1463836_1466748_1466891_1470825_1470925_1473956_1474111_1474559_1474686_1477403_1477487_1479620_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699_1494915_1501460_1501604_1523709
transcript_10925.known	chr1	+	1984	10	FSM	ENSG00000132677.13	ENST00000620376.4	1984	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	20	False	NA	9	True	GATAAA	-16	NA	156369250	156385219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156369437_156374606_156374730_156377300_156377488_156377989_156378400_156381346_156381514_156381805_156381944_156382067_156382202_156382747_156382870_156384526_156384601_156384776
transcript_109251.nic	chr5	-	1347	8	FSM	ENSG00000185986.13	ENST00000689786.1	1332	8	-16	1	-13	-1	multi-exon	FALSE	canonical	3	16	junction_4	23.0279333481256	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	174	False	NA	NA	False	AATAAA	-16	NA	1594517	1571956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1572287_1574181_1574296_1576178_1576310_1579276_1579485_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_109255.nnic	chr5	-	1139	7	NIC	ENSG00000185986.13	novel	1332	8	NA	NA	-13	-1	combination_of_known_splicesites	TRUE	canonical	3	23	junction_3	19.6694913225759	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	174	False	NA	NA	False	AATAAA	-16	NA	1594517	1571956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_1572287_1574181_1574296_1576178_1576310_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_109258.nnic	chr5	-	989	6	FSM	ENSG00000185986.13	ENST00000684972.1	1127	6	134	4	-13	-1	multi-exon	FALSE	canonical	3	3	junction_3	28.4914022118954	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	174	False	NA	NA	False	AATAAA	-16	NA	1594517	1571956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1572287_1574181_1574296_1576178_1576310_1589246_1589366_1593112_1593285_1594394
transcript_109262.known	chr5	-	736	3	FSM	ENSG00000185986.13	ENST00000436493.2	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCAGTCTCTGCTAGT	71	False	NA	NA	False	NA	NA	NA	1594620	1589027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1589366_1593112_1593285_1594394
transcript_109263.known	chr5	-	1033	5	FSM	ENSG00000188002.11	ENST00000507290.5	1033	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	49.9168057872296	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTTTTCTTTTTTTTTTT	-17	True	NA	2	True	ATTAAA	-20	NA	1633981	1598919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1599270_1599626_1599828_1602690_1602736_1632643_1632907_1633807
transcript_109270.known	chr5	-	1220	3	FSM	ENSG00000288549.1	ENST00000673659.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAAGTACTCACAAAAA	NA	False	NA	NA	False	NA	NA	NA	1644639	1639704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1640273_1640370_1640775_1644391
transcript_109271.known	chr5	+	3024	1	FSM	ENSG00000260066.1	ENST00000565428.1	3024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAGGTTCCCAACATTC	NA	False	NA	NA	False	AATAAA	-16	NA	1725148	1728172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_1725100_1728200
transcript_109272.known	chr5	-	793	2	FSM	ENSG00000171421.13	ENST00000510999.1	793	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCCCCCGTGGCTGTGG	1909	False	NA	NA	False	NA	NA	NA	1799750	1798828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1799076
transcript_109273.known	chr5	-	595	2	FSM	ENSG00000171421.13	ENST00000505818.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGTTCATTCATTCTC	293	False	NA	-10	True	ATTAAA	-16	NA	1801366	1798385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1801333
transcript_109274.known	chr5	-	686	2	FSM	ENSG00000171421.13	ENST00000508987.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	4800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTAGTTCATTCATTCT	1764	False	NA	-11	True	ATTAAA	-15	NA	1799895	1798386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1799770
transcript_109275.known	chr5	-	587	2	FSM	ENSG00000171421.13	ENST00000382647.7	587	2	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	0	3183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCTTAGTTCATTCAT	-6	True	NA	-14	True	ATTAAA	-12	NA	1799838	1798389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1799809
transcript_109276.known	chr5	-	609	2	FSM	ENSG00000171421.13	ENST00000505059.7	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	0	3962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	-5	True	NA	-9	True	ATTAAA	-17	NA	1799837	1798384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1799791
transcript_109292.known	chr5	+	518	4	FSM	ENSG00000145494.12	ENST00000274137.10	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2761	junction_3	121.658903861941	28684	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTAAGTTTGTTTCT	1	True	NA	30	True	AATAAA	-22	NA	1801406	1816048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_1801550_1802320_1802375_1814338_1814462_1815850
transcript_109295.known	chr5	-	2630	5	FSM	ENSG00000170561.13	ENST00000382611.10	2630	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	44.1665880502445	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTATATTTATTTCT	-3	True	NA	-9	True	AATAAA	-17	NA	2751662	2745844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_2746787_2747540_2747617_2748344_2749053_2749381_2749788_2751164
transcript_109298.known	chr5	-	3079	4	FSM	ENSG00000170561.13	ENST00000302057.6	3079	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	24.9131825880731	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTTTGGGGCTTATT	5	True	NA	77	True	AATAAA	-21	NA	2751677	2746164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_2747617_2748344_2749053_2749381_2749788_2751164
transcript_109299.known	chr5	+	1441	3	FSM	ENSG00000186493.14	ENST00000515640.5	1441	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCGACTCTTACTAC	1	True	NA	13	True	AATAAA	-22	NA	2752245	2754373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_2752465_2752621_2752755_2753284
transcript_109300.known	chr5	+	387	2	FSM	ENSG00000186493.14	ENST00000649739.1	387	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCGAGGCCGAGCGC	8	True	NA	NA	False	NA	NA	NA	2752130	2755081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_2752465_2755028
transcript_109301.nnic	chr5	+	694	2	FSM	ENSG00000249808.4	ENST00000692105.1	670	2	-26	2	-26	0	multi-exon	FALSE	canonical	1	1	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTTTCCTATGATAT	1561	False	NA	NA	False	ATTAAA	-22	NA	3179422	3181487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_3179558_3180928
transcript_109302.known	chr5	+	2080	4	FSM	ENSG00000170549.4	ENST00000302006.4	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	8.17856276425687	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTCCCCGCTCCTGCTG	0	True	NA	9	True	AATAAA	-16	NA	3595831	3601403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_3596382_3599224_3600261_3600608_3600682_3600982
transcript_109308.known	chr5	-	432	2	FSM	ENSG00000250529.1	ENST00000507950.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGTAGTCTTTAAAAAT	12	False	NA	NA	False	AATAAA	-14	NA	5078311	5069191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_5069516_5078203
transcript_109311.known	chr5	-	1633	4	FSM	ENSG00000250579.3	ENST00000512155.3	1684	4	34	17	34	0	multi-exon	TRUE	canonical	3	27	junction_3	18.006171781426	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-16	False	NA	-39	True	AATAAA	-4	NA	5140119	5132100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139955
transcript_109312.nnic	chr5	-	1593	4	NNC	ENSG00000250579.3	novel	1628	4	NA	NA	-608	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	27.6204433144888	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	NA	False	NA	-39	True	AATAAA	-4	NA	5140761	5132100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_5133233_5133636_5133771_5133867_5134071_5140637
transcript_109313.known	chr5	+	7930	19	FSM	ENSG00000164151.12	ENST00000296564.9	7930	19	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_9	37.5629923603236	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTGTTCTGATTATTA	-20	True	NA	18	True	AATAAA	-21	NA	5422676	5490220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_5423000_5436417_5436477_5437079_5437115_5439894_5439914_5441111_5441224_5443167_5443245_5444288_5444327_5447426_5447510_5447720_5447761_5447840_5447898_5454551_5454639_5457331_5457742_5460435_5465227_5466333_5466503_5468827_5468989_5473557_5473749_5475972_5476080_5486720_5486820_5489148
transcript_109315.known	chr5	-	1101	4	FSM	ENSG00000133398.4	ENST00000255764.4	1101	4	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_3	33.6386021641143	1946	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTTCCCAGAGGGT	-6	True	NA	44	True	AATATA	-27	NA	6378547	6371873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_6372602_6374323_6374427_6377165_6377250_6378361
transcript_109317.known	chr5	-	3056	19	FSM	ENSG00000037474.15	ENST00000264670.11	3056	19	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_5	61.6397588942657	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTGATTCCTGTTT	2	True	NA	NA	False	AATAAA	-15	NA	6633044	6599238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
transcript_109318.known	chr5	-	2619	18	FSM	ENSG00000037474.15	ENST00000506139.5	2619	18	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_16	172.021624938165	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAGTATTTTTTAAA	4	True	NA	NA	False	NA	NA	NA	6633042	6599568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6632598_6632757_6632883
transcript_109319.known	chr5	+	7035	5	FSM	ENSG00000145545.12	ENST00000274192.7	7035	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	8.38152730712011	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTTTGCTCATTGGAT	-4	True	NA	35	True	ATTAAA	-30	NA	6633439	6674386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_6633870_6651841_6652009_6656077_6656180_6662815_6662967_6668201
transcript_10934.nnic	chr1	+	1122	4	NIC	ENSG00000132677.13	novel	1927	9	NA	NA	-144	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	2.86744175568088	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	NA	False	NA	9	True	GATAAA	-16	NA	156369066	156385219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156369437_156382747_156382870_156384413_156384601_156384776
transcript_109340.known	chr5	-	885	2	FSM	ENSG00000250668.2	ENST00000514869.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTAGTTACTCAGCCC	NA	False	NA	NA	False	NA	NA	NA	7347977	7346985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7347769_7347875
transcript_109341.known	chr5	-	407	3	FSM	ENSG00000249638.1	ENST00000504765.1	407	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGTTGTAAATACAGT	NA	False	NA	NA	False	AGTAAA	-20	NA	7364531	7362978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7363116_7363502_7363585_7364343
transcript_109343.known	chr5	+	6645	25	FSM	ENSG00000078295.17	ENST00000338316.9	6645	25	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_19	118.379656426075	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAGA	18	True	NA	NA	False	NA	NA	NA	7396137	7830081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7396507_7414572_7414771_7520737_7520900_7626166_7626317_7690690_7690840_7695751_7695864_7698246_7698375_7706743_7706903_7707705_7707839_7709210_7709388_7712855_7712900_7717156_7717238_7724544_7724615_7727163_7727262_7743667_7743753_7757448_7757587_7766686_7766807_7772931_7773102_7784364_7784450_7789641_7789801_7802217_7802365_7804584_7804693_7816865_7816981_7820564_7820690_7826718
transcript_10935.nnic	chr1	+	950	4	NIC	ENSG00000132677.13	novel	1862	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	2.05480466765633	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	0	True	NA	9	True	GATAAA	-16	NA	156369211	156385219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156369437_156382747_156382870_156384440_156384601_156384776
transcript_109351.known	chr5	-	2028	3	FSM	ENSG00000215217.7	ENST00000399810.7	2028	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCATTTACTTTCAG	-22	True	NA	NA	False	AATAAA	-17	NA	7851133	7830377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7832030_7835381_7835499_7850874
transcript_109353.known	chr5	+	3245	15	FSM	ENSG00000124275.15	ENST00000440940.7	3245	15	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	40.2307756092578	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	-19	True	NA	6	True	AATAAA	-19	NA	7869147	7901113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869216_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_109357.known	chr5	+	3274	15	FSM	ENSG00000124275.15	ENST00000264668.6	3274	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	55.651246387568	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	17	True	AATAAA	-30	NA	7869103	7901124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869190_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_109359.nic	chr5	+	3110	14	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	141	junction_2	29.4578226216648	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	-27	True	NA	17	True	AATAAA	-30	NA	7869139	7901124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_10936.nnic	chr1	+	898	4	NIC	ENSG00000132677.13	novel	1790	10	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.18993502999218	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	NA	False	NA	9	True	GATAAA	-16	NA	156369177	156385219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156369437_156382747_156382870_156384526_156384601_156384776
transcript_109362.known	chr5	+	3076	14	FSM	ENSG00000124275.15	ENST00000511461.5	3076	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	51.1485827251636	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	-19	True	NA	17	True	AATAAA	-30	NA	7869147	7901124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869190_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_109363.nic	chr5	+	3021	13	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	21	junction_6	56.4306358874917	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	-27	True	NA	17	True	AATAAA	-30	NA	7869139	7901124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_109370.nic	chr5	-	2394	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	-46	0	intron_retention	FALSE	canonical	3	18	junction_6	29.2617497767991	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	NA	False	NA	-13	True	AATAAA	-16	NA	7869083	7859158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868108_7868978
transcript_109371.known	chr5	-	2431	7	FSM	ENSG00000124279.12	ENST00000264669.10	2431	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	19.4028921097403	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-4	True	NA	-13	True	AATAAA	-16	NA	7869031	7859158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868197_7868978
transcript_109374.known	chr5	-	637	6	FSM	ENSG00000124279.12	ENST00000282110.8	637	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	35.1533782160406	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAAAAGAAAAATATAAT	17	True	NA	NA	False	NA	NA	NA	7869010	7859380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7868978
transcript_109375.known	chr5	-	819	6	FSM	ENSG00000124279.12	ENST00000513658.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	43.6091733469003	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGACTGGTGATCTGA	1	True	NA	NA	False	ATTAAA	-39	NA	7869026	7859335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861774_7862822_7862998_7865897_7865984_7868978
transcript_109377.known	chr5	+	546	4	FSM	ENSG00000124275.15	ENST00000510279.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	23.0120741254576	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGGTTTTGAAGCAA	-19	True	NA	NA	False	AAGAAA	-3	NA	7869147	7878149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943
transcript_109379.known	chr5	-	817	2	FSM	ENSG00000124279.12	ENST00000504695.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTGGAAACATTTA	-10	True	NA	NA	False	TATAAA	-13	NA	7869037	7867349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7868108_7868978
transcript_109380.known	chr5	+	3239	2	FSM	ENSG00000247516.8	ENST00000606459.1	3239	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCCTTTTCAGTTGTT	-21	True	NA	NA	False	AATAAA	-15	NA	8457690	8463095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_8457767_8459932
transcript_109382.known	chr5	+	1799	3	FSM	ENSG00000250786.3	ENST00000508179.2	1919	3	4	116	4	-116	multi-exon	FALSE	canonical	3	44	junction_2	33	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATGTCCTCTCTATTC	-6	True	NA	NA	False	AAAAAG	-19	NA	9546199	9550609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_9546531_9548989_9549150_9549301
transcript_109384.known	chr5	+	842	2	FSM	ENSG00000250786.3	ENST00000655411.1	436	2	5	-411	5	411	multi-exon	FALSE	canonical	3	110	junction_1	0	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTCTTTAGGGTTCT	-20	True	NA	NA	False	NA	NA	NA	9546289	9549590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_9546531_9548989
transcript_109386.nnic	chr5	+	740	6	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1.16619037896906	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTGAATTCTTTA	NA	False	NA	6	True	AATAAA	-16	NA	9836109	9857607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_9836213_9847595_9847706_9848914_9848961_9849693_9849834_9851021_9851147_9857391
transcript_109389.nnic	chr5	+	600	5	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	2	junction_2	1.22474487139159	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTGAATTCTTTA	NA	False	NA	6	True	AATAAA	-16	NA	9836109	9857607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_9836213_9847595_9847706_9848914_9848961_9851021_9851147_9857391
transcript_109391.nnic	chr5	+	861	5	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.12132034355964	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTGAATTCTTTA	NA	False	NA	6	True	AATAAA	-16	NA	9836109	9857607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_9836213_9847595_9847710_9848960_9849264_9851021_9851147_9857391
transcript_109392.nnic	chr5	+	554	4	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.05480466765633	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTGAATTCTTTA	NA	False	NA	6	True	AATAAA	-16	NA	9836109	9857607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_9836213_9847595_9847706_9851021_9851147_9857391
transcript_109395.nnic	chr5	+	422	3	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTTTGAATTCTTTA	NA	False	NA	6	True	AATAAA	-16	NA	9836131	9857607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_9836213_9851021_9851147_9857391
transcript_109405.known	chr5	-	2651	5	FSM	ENSG00000150756.14	ENST00000511437.6	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	13.9642400437689	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCCAGCCTCAGGTATGT	3	True	NA	-3	True	ATTAAA	-18	NA	10249888	10225506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249857
transcript_109406.known	chr5	-	1928	6	FSM	ENSG00000150756.14	ENST00000280330.12	1928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.2875881934985	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGATCATTTTCATTTA	-5	True	NA	-26	True	TATAAA	-9	NA	10249896	10226329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239041_10239357_10244433_10244501_10249857
transcript_109407.known	chr5	-	1160	4	FSM	ENSG00000150756.14	ENST00000510047.5	1160	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	23.3666428910958	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAAATAATTTGTTCC	-6	True	NA	NA	False	NA	NA	NA	10249897	10226955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10227648_10236477_10236616_10239066_10239357_10249857
transcript_109408.known	chr5	-	789	3	FSM	ENSG00000150756.14	ENST00000508553.1	789	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	12	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGCCTGTGTGAG	3	True	NA	NA	False	TATAAA	-28	NA	10249888	10236147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10236616_10239066_10239357_10249857
transcript_109409.known	chr5	+	1997	11	FSM	ENSG00000150753.12	ENST00000515676.5	1997	11	0	0	0	0	multi-exon	FALSE	canonical	2	152	junction_1	1147.78449196702	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAGCTGTTTGGTAAC	231	False	NA	-3	True	NA	NA	NA	10250536	10264902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10250894_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_109414.known	chr5	+	3293	11	FSM	ENSG00000150753.12	ENST00000280326.9	3293	11	0	0	0	0	multi-exon	FALSE	canonical	3	3536	junction_5	310.449367852473	6801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTTTTCACGTT	-26	True	NA	21	True	AATAAA	-15	NA	10250279	10266389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10250446_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_109415.known	chr5	-	3893	6	FSM	ENSG00000164237.9	ENST00000296658.4	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	19.9659710507654	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGTGAAATTAATTTTA	-29	True	NA	NA	False	ATTAAA	-14	NA	10307902	10277594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10280633_10282196_10282289_10286353_10286497_10288421_10288530_10290547_10290782_10307624
transcript_109417.known	chr5	-	796	4	FSM	ENSG00000164237.9	ENST00000511963.5	796	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	62.6968012652072	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTTGGGAAAGCCACCTA	1380	False	NA	NA	False	NA	NA	NA	10307603	10286131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10286497_10288421_10288530_10290547_10290782_10307514
transcript_109418.known	chr5	-	901	4	FSM	ENSG00000164237.9	ENST00000506821.1	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	18.3726850393609	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTCACCGGGAGTCAAG	14	True	NA	NA	False	AATAGA	-30	NA	10307859	10286172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10286497_10288421_10288530_10290547_10290782_10307624
transcript_109420.known	chr5	-	901	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGCTTGACTAATGTTA	12	True	NA	1	True	AATAAA	-29	NA	10353601	10352700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10352700_10353600
transcript_109421.known	chr5	+	9641	26	FSM	ENSG00000145495.16	ENST00000274140.10	9641	26	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_11	36.2933382316921	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTTGACAAGATGCTT	-29	True	NA	NA	False	AATAAA	-17	NA	10353694	10440388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_109425.known	chr5	+	4734	25	FSM	ENSG00000145495.16	ENST00000511802.5	4734	25	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	33.0213525195777	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACTGCCTGATTTTT	-9	True	NA	12	True	NA	NA	NA	10353714	10434285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_109426.known	chr5	+	3062	25	FSM	ENSG00000145495.16	ENST00000449913.6	3062	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	54.8661091253568	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTATATTAATTTATT	-21	True	NA	-10	True	ATTAAA	-28	NA	10353702	10433961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_109432.nic	chr5	+	1122	4	ISM	ENSG00000145495.16	ENST00000511802.5	4734	25	-63	51801	-43	-7888	5prime_fragment	FALSE	canonical	3	150	junction_1	37.6917320730511	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGCAAAAGATGAATTC	NA	False	NA	NA	False	NA	NA	NA	10353651	10382484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799
transcript_109434.known	chr5	+	2874	23	FSM	ENSG00000145495.16	ENST00000503788.5	2874	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	57.0133556920896	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAATGTATATTAATT	-8	True	NA	-14	True	ATTAAA	-24	NA	10353715	10433957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10353918_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_109435.known	chr5	+	253	2	FSM	ENSG00000145495.16	ENST00000514312.1	253	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAATAATCCTAGCCAG	NA	False	NA	NA	False	NA	NA	NA	10415598	10417451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10415670_10417269
transcript_109436.known	chr5	+	1291	6	FSM	ENSG00000145491.12	ENST00000503804.5	1291	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.87054001888146	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCTCTGTAGTGTGAGT	5795	False	NA	NA	False	AATACA	-16	NA	10441523	10465024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10442004_10442126_10442299_10448259_10448384_10449951_10450114_10461183_10461360_10464847
transcript_109437.known	chr5	+	1061	5	FSM	ENSG00000145491.12	ENST00000274134.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.8613807855649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTGTAGTGTGAGTGT	-23	True	NA	NA	False	AATACA	-18	NA	10441878	10465026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10442299_10448259_10448384_10449951_10450114_10461183_10461360_10464847
transcript_109438.known	chr5	-	2301	4	FSM	ENSG00000112977.16	ENST00000230895.11	2301	4	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_1	25.4863798048204	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTTTTTTCTTATAGA	-33	True	NA	-2	True	AATAAA	-20	NA	10761234	10679229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10681170_10683528_10683572_10748174_10748272_10761013
transcript_109445.nnic	chr5	+	2154	3	NNC	ENSG00000248131.6	novel	1844	4	NA	NA	13781	-47062	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGTATGTAACATAACT	-2	True	NA	NA	False	AATAAA	-22	NA	12662744	12713733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_12663088_12711197_12711300_12712024
transcript_109449.nnic	chr5	-	817	2	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGACTCAGCATAATAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	12668035	12642059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_12642577_12667735
transcript_109451.nnic	chr5	-	688	2	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTCGTTTTTGTAT	NA	False	NA	NA	False	TATAAA	-19	NA	12668035	12642188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_12642577_12667735
transcript_109453.nnic	chr5	-	562	2	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAAGAAGATTCTAGCT	NA	False	NA	NA	False	AATAAA	-18	NA	12668035	12642314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_12642577_12667735
transcript_109456.known	chr5	-	15645	79	FSM	ENSG00000039139.11	ENST00000681290.1	15645	79	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.12731677474043	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCATTCATAATTGTTG	-30	True	NA	NA	False	AATAAA	-15	NA	14011818	13690327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_13692136_13700639_13700872_13701283_13701437_13708122_13708336_13714404_13714621_13716486_13716691_13717314_13717521_13718881_13719102_13720999_13721246_13727506_13727657_13729438_13729561_13735130_13735322_13735817_13735933_13737251_13737496_13751077_13751261_13752133_13752290_13753232_13753550_13754202_13754339_13758845_13758984_13762721_13762902_13765975_13766180_13768959_13769137_13769500_13769616_13770748_13770981_13776438_13776707_13777201_13777356_13780828_13780960_13786178_13786352_13788715_13788915_13791993_13792218_13793514_13793729_13793935_13794059_13807590_13807726_13809043_13809187_13810058_13810261_13811646_13811824_13814604_13814847_13817547_13817695_13820345_13820500_13823262_13823371_13824198_13824334_13829509_13829705_13830025_13830214_13830596_13830776_13839355_13839529_13840905_13841131_13841691_13841905_13844836_13844994_13850651_13850816_13859451_13859606_13862547_13862748_13864396_13864638_13865667_13865907_13866219_13866283_13867773_13867993_13870766_13871003_13871563_13871766_13876683_13876818_13882727_13882816_13882903_13883095_13884988_13885229_13885963_13886130_13890975_13891122_13894649_13894822_13900205_13900413_13901251_13901574_13902052_13902139_13911385_13911494_13913742_13913959_13914519_13914643_13916347_13916456_13917142_13917257_13919175_13919353_13920479_13920618_13922106_13922329_13923279_13923441_13928093_13928179_13931109_13931245_14011647
transcript_109457.known	chr5	+	7040	8	FSM	ENSG00000145569.6	ENST00000274217.4	7040	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	7.24498419034627	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAGTTTCAGGCAAGATT	-22	True	NA	NA	False	AATAAA	-28	NA	14581791	14616180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_14581959_14600964_14601125_14601212_14601245_14601350_14601443_14602182_14602333_14607329_14607459_14608747_14609018_14610140
transcript_109460.nnic	chr5	+	536	3	NNC	ENSG00000250448.1	novel	2066	2	NA	NA	-483	-1614	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTTATGCCTTGTGTTG	NA	False	NA	5	True	ATTAAA	-17	NA	16179754	16183971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_16179821_16180441_16180663_16183722
transcript_109462.known	chr5	-	584	2	FSM	ENSG00000183654.9	ENST00000507111.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAAGAGTCCTCTTGTTC	2992	False	NA	-11	True	AATACA	-10	NA	16177829	16067313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_16067794_16177725
transcript_109467.nnic	chr5	+	349	2	NNC	ENSG00000250448.1	novel	2066	2	NA	NA	-517	-1614	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTTATGCCTTGTGTTG	NA	False	NA	5	True	ATTAAA	-17	NA	16179720	16183971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_16179821_16183722
transcript_109468.nnic	chr5	+	530	2	NNC	ENSG00000250448.1	novel	2066	2	NA	NA	-517	-1433	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAAAGAATGATTACTTA	NA	False	NA	NA	False	ATTAAA	-9	NA	16179720	16184152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_16179821_16183722
transcript_109473.nnic	chr5	+	744	3	Antisense	novelGene_ENSG00000248150.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	16420260	16425384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_16420527_16422457_16422560_16425008
transcript_109475.known	chr5	-	1707	6	FSM	ENSG00000173545.5	ENST00000308683.3	1707	6	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_5	30.0798936168332	1728	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTCAGATGTCGTTT	0	True	NA	-9	True	AATAAA	-14	NA	16465800	16451518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
transcript_109476.known	chr5	-	4803	23	FSM	ENSG00000145555.15	ENST00000505695.5	4803	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	123.629043900969	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGTGTCTCCGAGGATC	0	True	NA	NA	False	AAAACA	-42	NA	16742228	16666561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_10948.known	chr1	-	725	4	FSM	ENSG00000125462.19	ENST00000497824.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7.1336448530109	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTGGTAGTGGATAT	7156	False	NA	-4	True	AATAAA	-23	NA	156429579	156404255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156414653_156414754_156426797_156426873_156429375
transcript_109480.nic	chr5	-	1044	5	ISM	ENSG00000145555.15	ENST00000505695.5	4803	23	-39	36364	-39	51	5prime_fragment	FALSE	canonical	0	0	junction_3	173.676963066493	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACAGTACCTTTCTTGCT	2516	False	NA	60	True	AAGAAA	-41	NA	16742267	16702925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_10949.known	chr1	-	726	4	FSM	ENSG00000125462.19	ENST00000441085.6	726	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.77123616632825	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCCTGAATGTTGGG	683	False	NA	1	True	AATAAA	-22	NA	156456668	156446410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156446574_156454642_156454796_156455627_156455722_156456352
transcript_109491.known	chr5	-	4793	13	FSM	ENSG00000145526.12	ENST00000382275.6	4793	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.862006702732383	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTTCCAGATGCTG	0	True	NA	NA	False	AATAAA	-25	NA	19988200	19471295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_19473717_19483300_19483553_19502991_19503110_19520656_19520779_19543868_19544006_19571578_19571833_19591056_19591245_19612433_19612602_19721346_19721467_19746941_19747237_19838758_19839243_19981059_19981179_19988085
transcript_109493.known	chr5	+	758	7	ISM	ENSG00000183666.18	ENST00000688956.1	1622	9	45	9076	4	-9076	5prime_fragment	FALSE	canonical	2	3	junction_3	19.7877627728744	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCAGTTTAGCGCA	40	False	NA	NA	False	NA	NA	NA	21459559	21501826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_21459585_21459677_21459744_21461782_21461867_21491320_21491509_21495097_21495183_21497021_21497197_21501691
transcript_109494.nnic	chr5	+	1178	5	NNC	ENSG00000183666.18	novel	614	4	NA	NA	0	1165	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	11.5542200082913	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCAGAACTCCTCTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	21459479	21468142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_21459585_21459677_21459744_21461782_21461867_21466618_21467085_21467685
transcript_109496.nnic	chr5	+	430	4	FSM	ENSG00000183666.18	ENST00000691699.1	614	4	0	184	0	-184	multi-exon	FALSE	canonical	2	6	junction_3	9.53356643071673	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGCATTATTTATCTCA	NA	False	NA	NA	False	TTTAAA	-16	NA	21459479	21466793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21466618
transcript_109498.nnic	chr5	+	614	4	FSM	ENSG00000183666.18	ENST00000691699.1	614	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.53356643071673	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGTGAAGGGTCTGGA	NA	False	NA	NA	False	TATAAA	-15	NA	21459479	21466977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21466618
transcript_109499.nnic	chr5	+	956	4	ISM	ENSG00000183666.18	ENST00000688960.1	1607	6	-35	3240	0	-3228	5prime_fragment	FALSE	canonical	1	1	junction_3	11.7756811551038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTATCCTATTAGTTCTG	NA	False	NA	NA	False	GATAAA	-17	NA	21459479	21471210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_21459585_21459677_21459744_21461782_21461867_21470509
transcript_10950.known	chr1	-	781	4	FSM	ENSG00000125462.19	ENST00000667036.1	781	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTTGAGTTACAGAAT	711	False	NA	NA	False	ATTAAA	-20	NA	156456640	156453006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156453253_156454642_156454796_156455627_156455722_156456352
transcript_109500.known	chr5	+	1305	4	FSM	ENSG00000183666.18	ENST00000685140.1	1644	4	61	278	0	1	multi-exon	FALSE	canonical	2	12	junction_3	6.94422221866655	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTTTATTTATGT	-7	True	NA	NA	False	AATAAA	-22	NA	21459512	21474439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21473356
transcript_109501.known	chr5	+	362	3	FSM	ENSG00000183666.18	ENST00000509649.5	362	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGAGGCCAAGGCAGGCA	0	True	NA	NA	False	NA	NA	NA	21459496	21461990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_21459585_21459677_21459744_21461782
transcript_109512.nnic	chr5	-	1419	5	Fusion	ENSG00000251654.2_ENSG00000248605.5	novel	558	5	NA	NA	-24	-59539	multi-exon	FALSE	canonical	0	0	junction_4	3.90512483795333	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTTTATTGCCTAATA	NA	False	NA	3	True	AATAAA	-28	NA	25445949	25278511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_25279473_25280930_25281054_25284709_25284833_25298527_25298610_25445819
transcript_10952.known	chr1	-	857	3	FSM	ENSG00000125462.19	ENST00000452465.2	857	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCAAGTGATCTACATGG	599	False	NA	NA	False	ATTAAA	-18	NA	156456752	156452889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156453253_156455627_156455722_156456352
transcript_10953.known	chr1	-	473	3	FSM	ENSG00000125462.19	ENST00000400991.6	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGTAGTGGATATACCT	3	True	NA	0	True	AATAAA	-27	NA	156429423	156404251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156426797_156426873_156429375
transcript_109539.known	chr5	-	638	3	FSM	ENSG00000248605.5	ENST00000507887.5	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	16.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAACTCTATTTTTCTC	NA	False	NA	NA	False	NA	NA	NA	25445925	25413438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_25413845_25422729_25422856_25445819
transcript_10954.known	chr1	-	542	3	FSM	ENSG00000125462.19	ENST00000497822.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCATCCCAGTTTATCC	9	True	NA	-112	True	NA	NA	NA	156421758	156404363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156414653_156414754_156421554
transcript_109553.nnic	chr5	-	579	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-47	-18172	at_least_one_novel_splicesite	FALSE	canonical	3	103	junction_1	42	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAATTATA	NA	False	NA	NA	False	NA	NA	NA	25445972	25433817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_25434212_25435241_25435274_25445819
transcript_109555.nnic	chr5	-	1233	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-56	665	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATAAATGAGTGTATGT	NA	False	NA	-35	True	AGTAAA	-20	NA	25445981	25412773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_25413845_25445819
transcript_109556.nnic	chr5	-	941	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-56	373	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAGAGAGATGATTGAC	NA	False	NA	-7	True	AATAAA	-14	NA	25445981	25413065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_25413845_25445819
transcript_109557.nnic	chr5	-	742	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-56	174	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGATTTTGAGAGTATT	NA	False	NA	-6	True	AATAAA	-33	NA	25445981	25413264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_25413845_25445819
transcript_109559.nnic	chr5	-	483	2	NIC	ENSG00000248605.5	novel	638	3	NA	NA	-56	-85	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGAAAGTTTATTTAC	NA	False	NA	NA	False	CATAAA	-11	NA	25445981	25413523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_25413845_25445819
transcript_109563.nnic	chr5	-	739	2	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-239	-18172	at_least_one_novel_splicesite	FALSE	canonical	3	231	junction_1	0	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAATTATA	NA	False	NA	NA	False	NA	NA	NA	25446164	25433817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_25434212_25445819
transcript_109564.known	chr5	-	369	3	FSM	ENSG00000248605.5	ENST00000507926.1	369	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	55.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTATCTAGGCAACTTGA	NA	False	NA	NA	False	NA	NA	NA	25445907	25415645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_25415801_25422729_25422856_25445819
transcript_109566.known	chr5	-	3082	12	FSM	ENSG00000113100.10	ENST00000231021.9	3082	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.04898684901539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTTATTTAATTCCT	-2	True	NA	NA	False	AATAAA	-20	NA	27038586	26880596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_26881624_26885613_26885866_26885965_26886084_26889835_26889958_26890427_26890565_26902475_26902730_26903636_26903825_26905958_26906127_26906718_26906839_26915629_26915925_26988105_26988383_27038462
transcript_109569.nic	chr5	-	1551	3	ISM	ENSG00000113100.10	ENST00000511822.1	532	4	-35	71197	-32	-71197	5prime_fragment	FALSE	canonical	1	1	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATACA	-6	True	NA	NA	False	CATAAA	-29	NA	27038618	26987104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_26988383_27028253_27028371_27038462
transcript_109571.nic	chr5	-	1421	2	ISM	ENSG00000113100.10	ENST00000505045.1	1801	6	-21	84099	-21	-71199	5prime_fragment	FALSE	canonical	2	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	5	True	NA	NA	False	CATAAA	-27	NA	27038607	26987106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_26988383_27038462
transcript_109573.known	chr5	+	1274	7	FSM	ENSG00000250337.8	ENST00000664566.1	1274	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	17.4132771821453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAACAATGAGTGTCATT	6	True	NA	NA	False	AATAAA	-17	NA	27472293	27496395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27484925_27485030_27494234_27494336_27495948
transcript_109574.known	chr5	+	1121	6	FSM	ENSG00000250337.8	ENST00000668103.1	1121	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.4780951399218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	64	False	NA	NA	False	AATAAA	-26	NA	27472351	27496404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27494234_27494336_27495948
transcript_109575.known	chr5	+	1177	6	FSM	ENSG00000250337.8	ENST00000514844.6	1177	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.6053755672924	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCATTTTGTAATTAC	-17	True	NA	NA	False	AATAAA	-27	NA	27472270	27496405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27489281_27489387_27494234_27494336_27495948
transcript_109578.known	chr5	+	1088	5	FSM	ENSG00000250337.8	ENST00000667624.1	1088	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	20.1168461742889	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	-4	True	NA	NA	False	AATAAA	-26	NA	27472283	27496404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27495948
transcript_10958.known	chr1	-	780	3	FSM	ENSG00000125462.19	ENST00000663987.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTATCTGTTTACATT	720	False	NA	NA	False	AATAAA	-18	NA	156456631	156446166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156446574_156455627_156455722_156456352
transcript_109580.known	chr5	+	1117	5	FSM	ENSG00000250337.8	ENST00000510165.6	1117	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.8065812948553	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	-4	True	NA	NA	False	AATAAA	-26	NA	27472283	27496404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27494234_27494336_27495948
transcript_109582.known	chr5	+	1045	5	FSM	ENSG00000250337.8	ENST00000657375.2	1111	5	66	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.2854627751008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	13	True	NA	NA	False	AATAAA	-26	NA	27472300	27496404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27489281_27489387_27495948
transcript_109585.known	chr5	+	1325	4	FSM	ENSG00000250337.8	ENST00000659860.1	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	14.3836326735943	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAGCCTAATGTCATT	-8	True	NA	NA	False	AATAAA	-28	NA	27472279	27485686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27484925
transcript_109586.nic	chr5	+	1067	4	FSM	ENSG00000250337.8	ENST00000686605.1	1016	4	-48	-3	-2	0	multi-exon	FALSE	canonical	2	2	junction_3	19.8158185969358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	NA	False	NA	NA	False	AATAAA	-26	NA	27472232	27496404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27495948
transcript_109588.known	chr5	+	971	4	FSM	ENSG00000250337.8	ENST00000659077.1	971	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	21.2289111041209	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	-18	True	NA	NA	False	AATAAA	-26	NA	27472269	27496404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27495948
transcript_109589.known	chr5	+	1078	4	FSM	ENSG00000250337.8	ENST00000660307.1	1078	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.6384431561566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	-12	True	NA	NA	False	AATAAA	-26	NA	27472275	27496404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27494118_27494336_27495948
transcript_109590.known	chr5	+	1605	4	FSM	ENSG00000250337.8	ENST00000655107.1	1605	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.6384431561566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTTATGAAAGACATTT	NA	False	NA	NA	False	AATAAA	-15	NA	27472222	27496994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27494234_27494336_27495948
transcript_109591.nnic	chr5	+	1226	3	NNC	ENSG00000250337.8	novel	925	4	NA	NA	0	146	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	23.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAGAAGACATA	-4	True	NA	NA	False	AAAAAG	-6	NA	27472283	27478173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_27472520_27475534_27475696_27477344
transcript_109592.nic	chr5	+	982	3	ISM	ENSG00000250337.8	ENST00000659860.1	1325	4	-47	7514	-2	145	5prime_fragment	FALSE	canonical	3	15	junction_2	17	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAAAAGAAGACAT	NA	False	NA	NA	False	AAAAAG	-5	NA	27472232	27478172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_27472520_27475534_27475696_27477638
transcript_109593.known	chr5	+	1610	3	FSM	ENSG00000250337.8	ENST00000512067.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	22	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATTGAAATAACTTA	4	True	NA	NA	False	ATTAAA	-9	NA	27472291	27486146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27484925
transcript_109594.known	chr5	+	1456	3	FSM	ENSG00000250337.8	ENST00000653835.1	1456	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	23	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTTATGAAAGACATTT	-17	True	NA	NA	False	AATAAA	-15	NA	27472270	27496994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27495948
transcript_109596.nic	chr5	+	2925	2	FSM	ENSG00000250337.8	ENST00000688783.1	2712	2	-68	-145	-2	145	multi-exon	FALSE	canonical	3	49	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAAAAGAAGACAT	NA	False	NA	NA	False	AAAAAG	-5	NA	27472232	27478172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534
transcript_109599.known	chr5	-	5416	36	FSM	ENSG00000113360.17	ENST00000344624.8	5416	36	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_30	68.6537363164168	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	-10	True	NA	NA	False	AATAAA	-25	NA	31532093	31400493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_109600.known	chr5	-	5305	35	FSM	ENSG00000113360.17	ENST00000511367.6	5305	35	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_34	66.6489343487725	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTTTCATTCATCAT	22	True	NA	NA	False	AATAAA	-22	NA	31532061	31400496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
transcript_109601.known	chr5	-	4681	35	FSM	ENSG00000113360.17	ENST00000513349.5	4681	35	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_29	73.0224701161808	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTCCATCTGTGTCC	-26	True	NA	NA	False	AATAAA	-33	NA	31532109	31401133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_10961.nnic	chr1	-	822	2	NIC	ENSG00000125462.19	novel	725	4	NA	NA	-272	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTGGTAGTGGATAT	6884	False	NA	-4	True	AATAAA	-23	NA	156429851	156404255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156404602_156429375
transcript_109612.nic	chr5	+	3271	9	NIC	ENSG00000082213.18	novel	3572	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	81.0708602088321	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	NA	False	NA	25	True	AATAAA	-18	NA	31532264	31554808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_31532474_31534271_31534326_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_109617.known	chr5	+	3572	9	FSM	ENSG00000082213.18	ENST00000325366.14	3572	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	25.7678942678675	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTAAGTGTAAGCGT	-24	True	NA	NA	False	ATTAAA	-30	NA	31532300	31555053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_10962.known	chr1	-	543	2	FSM	ENSG00000125462.19	ENST00000465270.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAGTGGTAGTGGATA	8506	False	NA	-5	True	AATAAA	-22	NA	156421752	156404256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156421554
transcript_109623.known	chr5	+	3117	9	FSM	ENSG00000082213.18	ENST00000510659.5	3117	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	90.960156112443	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	-38	True	NA	25	True	AATAAA	-18	NA	31532286	31554808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_109632.nic	chr5	+	578	4	ISM	ENSG00000082213.18	ENST00000325366.14	3572	9	-36	16721	-22	-352	5prime_fragment	FALSE	canonical	3	254	junction_2	22.8083805260747	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTACAATTGGATGTAAT	NA	False	NA	NA	False	NA	NA	NA	31532264	31538332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538259
transcript_109633.known	chr5	+	505	2	FSM	ENSG00000082213.18	ENST00000515409.5	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATATTTTAGGTTTGCTG	-30	True	NA	NA	False	NA	NA	NA	31532294	31534597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_31532474_31534271
transcript_109634.known	chr5	+	810	4	FSM	ENSG00000082213.18	ENST00000517780.1	810	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	113.620225116638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAAATAATTGTGTTTT	-30	True	NA	NA	False	AAGAAA	-9	NA	31532294	31538686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_31532474_31534271_31534326_31535743_31535894_31538259
transcript_109637.known	chr5	-	1074	4	FSM	ENSG00000113384.14	ENST00000503610.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	386.207485973825	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGAGAATGCTTTTGCT	5	True	NA	NA	False	NA	NA	NA	32174302	32126366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32126637_32135571_32135687_32143748_32143881_32173745
transcript_109638.known	chr5	+	802	1	FSM	ENSG00000272086.1	ENST00000606994.1	802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGCTGTGGCTAAAGA	67	False	NA	23	True	AATAAA	-20	NA	32174470	32175272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32174500_32175300
transcript_109639.known	chr5	+	416	1	FSM	ENSG00000230829.3	ENST00000477507.1	416	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTGTTTTGGTCATTA	35	False	NA	NA	False	NA	NA	NA	32221931	32222347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32221900_32222300
transcript_10964.known	chr1	-	688	5	FSM	ENSG00000125462.19	ENST00000310027.9	688	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.06573218223437	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTAATAGTGGTAGTG	7322	False	NA	-9	True	AATAAA	-18	NA	156429413	156404260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156407841_156407976_156414653_156414754_156426797_156426873_156429375
transcript_109640.known	chr5	-	5116	16	FSM	ENSG00000150712.11	ENST00000382142.8	5116	16	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	35.0570328972028	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTACTTGGTGTGGTTG	5	True	NA	-33	True	ATTAAA	-18	NA	32312939	32227006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32230348_32233772_32233935_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
transcript_109641.known	chr5	-	2215	14	FSM	ENSG00000150712.11	ENST00000264934.5	2215	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	90.1254221403502	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACTATGCAATTAAAAC	-25	True	NA	22	True	NA	NA	NA	32312969	32229607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32230348_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
transcript_109642.known	chr5	-	4717	20	FSM	ENSG00000056097.16	ENST00000265069.13	4717	20	0	0	0	0	multi-exon	TRUE	canonical	1	196	junction_12	110.843604728199	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTGCATCTTGTTA	4	True	NA	-12	True	AGTAAA	-17	NA	32444740	32354349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_109647.nic	chr5	-	1168	7	ISM	ENSG00000056097.16	ENST00000265069.13	4717	20	-11	49705	-11	2672	5prime_fragment	FALSE	canonical	3	497	junction_3	55.0799923343818	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGCATTGAAAGCCTCA	-7	True	NA	NA	False	TATAAA	-35	NA	32444751	32404054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_109649.known	chr5	-	1159	6	FSM	ENSG00000056097.16	ENST00000505366.1	1159	6	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	56.3240623534915	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTGGTATTCTAACTCC	6	True	NA	NA	False	NA	NA	NA	32444738	32406726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_10965.known	chr1	-	726	4	FSM	ENSG00000125462.19	ENST00000486517.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATAGTGGTAGTGGA	8506	False	NA	-7	True	AATAAA	-20	NA	156421752	156404258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156413412_156413498_156414653_156414754_156421554
transcript_109655.known	chr5	+	771	6	FSM	ENSG00000113387.12	ENST00000515355.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	2022.0275566866	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTGCCCACCACCTAG	6	True	NA	-31	True	ATTAAA	-42	NA	32585570	32601282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32585626_32586368_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_109661.known	chr5	+	562	6	FSM	ENSG00000113387.12	ENST00000502897.5	562	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2024.75316026423	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTCTAAATGTTCTC	23	False	NA	49	True	NA	NA	NA	32585587	32601150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32585626_32586428_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_109671.known	chr5	+	3449	5	FSM	ENSG00000113387.12	ENST00000265073.9	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	3967	junction_4	143.147651046044	16880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGTTATCCCGGTT	-8	True	NA	26	True	AATAAA	-14	NA	32585556	32604079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_109672.known	chr5	+	1658	6	FSM	ENSG00000113387.12	ENST00000511615.5	1658	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1989.4890399296	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTATATGTAGCCAG	-6	True	NA	40	True	NA	NA	NA	32585558	32601988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32594570_32594873_32598960_32599070_32601004
transcript_109673.known	chr5	-	156	1	FSM	ENSG00000251062.1	ENST00000504072.1	156	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATTCAGCATTAAAATAA	NA	False	NA	NA	False	AAGAAA	-31	NA	32888145	32887989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32888000_32888100
transcript_109674.known	chr5	+	629	1	FSM	ENSG00000240376.1	ENST00000467270.1	629	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	947	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTTTTGTCTTCACC	21	False	NA	-16	True	NA	NA	NA	33162178	33162807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_33162200_33162800
transcript_109675.known	chr5	+	2534	20	FSM	ENSG00000113407.14	ENST00000502553.5	2534	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	416.76852753077	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTGAGTACTGGAAGT	NA	False	NA	26	True	AATAAA	-17	NA	33440695	33467933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_33440792_33441045_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_109679.known	chr5	+	2672	19	FSM	ENSG00000113407.14	ENST00000265112.8	2672	19	0	0	0	0	multi-exon	FALSE	canonical	3	1294	junction_9	190.44275897089	3804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTTCAAGACTGCTC	-11	True	NA	12	True	AATAAA	-16	NA	33440964	33468086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_109680.known	chr5	+	2481	18	FSM	ENSG00000113407.14	ENST00000508361.5	2481	18	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	407.182793091284	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTTTCAAGACTGCT	-12	True	NA	11	True	AATAAA	-15	NA	33440963	33468085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_33441144_33445323_33445405_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_109681.known	chr5	+	466	5	FSM	ENSG00000113407.14	ENST00000514259.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	679.639978223765	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCGCCCTCTGGAAGAAGA	NA	False	NA	NA	False	AGTAAA	-20	NA	33440738	33453346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_33440777_33441045_33441144_33445323_33445405_33448540_33448732_33453288
transcript_109684.nnic	chr5	-	1044	4	NNC	ENSG00000151388.11	novel	1003	3	NA	NA	-829	-119	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	29.5334085777823	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTATCTCCTCTGTAT	NA	False	NA	-22	True	ATTAAA	-22	NA	33892848	33751316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_33751549_33881118_33881481_33891729_33891842_33892510
transcript_109687.known	chr5	-	1003	3	FSM	ENSG00000151388.11	ENST00000515401.1	1003	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	2.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCGAGTCTCTGCATA	7	True	NA	-75	True	TATAAA	-15	NA	33892019	33751197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33751549_33881118_33881481_33891729
transcript_10969.known	chr1	-	3194	11	FSM	ENSG00000116604.19	ENST00000360595.7	3194	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	35.964009787564	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTGCTGTTGTTCT	9936	False	NA	-1	True	NA	NA	NA	156490599	156466209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156467657_156467992_156468300_156468779_156469021_156475107_156475238_156477011_156477203_156479289_156479347_156479585_156479797_156480833_156480972_156482436_156482641_156483238_156483419_156490511
transcript_109691.known	chr5	-	8572	24	FSM	ENSG00000151388.11	ENST00000504830.6	8572	24	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	11.2983261553667	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTTTCTGTGTGATTC	-4	True	NA	-5	True	AATAAA	-13	NA	33891990	33523534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33527367_33534832_33534993_33546058_33546203_33549206_33549384_33561026_33561180_33576053_33577161_33588598_33588810_33595933_33596061_33614237_33614377_33615827_33616073_33624230_33624352_33630779_33630914_33637576_33637747_33641809_33641956_33643377_33643471_33648821_33648967_33649553_33649698_33658183_33658334_33661915_33662041_33683017_33683102_33683858_33684056_33751403_33751549_33881118_33881481_33891729
transcript_109692.known	chr5	-	1195	6	FSM	ENSG00000242110.8	ENST00000382085.7	1195	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	42.6051640062563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAGGACCCCCCAGCA	17	True	NA	-24	True	AATAAA	-1	NA	34008028	33988306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33988362_33989110_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_109693.known	chr5	-	4108	5	FSM	ENSG00000242110.8	ENST00000335606.11	4108	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	3.34477204006491	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTTATTTACATTTT	-5	True	NA	NA	False	AGTAAA	-40	NA	34008050	33986164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_109698.known	chr5	-	2919	4	FSM	ENSG00000242110.8	ENST00000382072.6	2919	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	46.6761895045715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTGCCTGTA	14	True	NA	-2	True	AATAAA	-20	NA	34008031	33987173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33989503_33998640_33998828_34005755_34005900_34007772
transcript_10970.nic	chr1	-	992	4	ISM	ENSG00000183856.11	ENST00000361170.7	6013	38	-43	40069	-4	-28298	5prime_fragment	FALSE	canonical	3	35	junction_2	3.39934634239519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTATGGTTTCTTTCTG	-6	False	NA	NA	False	AATGAA	-18	NA	156572608	156565473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_156566105_156566389_156566547_156569375_156569464_156572492
transcript_109700.known	chr5	-	1598	5	FSM	ENSG00000242110.8	ENST00000502637.5	1598	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.2671926392926	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCACGTGAAACAGAGTG	-12	True	NA	-36	True	NA	NA	NA	34008104	33988683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33989503_33998640_33998783_34004573_34004735_34005755_34005900_34007772
transcript_109701.known	chr5	-	1316	5	FSM	ENSG00000242110.8	ENST00000426255.6	1316	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.1631342418659	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACTGGACATT	8	True	NA	NA	False	AATAAA	-12	NA	34008084	33997006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33997519_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_109704.known	chr5	+	4986	18	FSM	ENSG00000039560.14	ENST00000265109.8	4986	18	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_10	92.5067658612266	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTGATTTTTGG	11	True	NA	17	True	AATAAA	-17	NA	34656327	34832612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_109706.known	chr5	+	2941	17	FSM	ENSG00000039560.14	ENST00000512629.5	2941	17	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_10	160.232143603429	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTCCTTGGCAGGAC	4	True	NA	-4	True	NA	NA	NA	34656438	34830765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_10971.nic	chr1	-	583	4	ISM	ENSG00000183856.11	ENST00000361170.7	6013	38	-43	40478	-4	-28707	5prime_fragment	FALSE	canonical	3	35	junction_2	3.39934634239519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGTCTTTGAACCAG	-6	False	NA	NA	False	NA	NA	NA	156572608	156565882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_156566105_156566389_156566547_156569375_156569464_156572492
transcript_109717.known	chr5	+	550	3	FSM	ENSG00000039560.14	ENST00000514931.5	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_1	62.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCGATAAGAAATAGCAT	29	True	NA	NA	False	NA	NA	NA	34656410	34757868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34656476_34686871_34686956_34757467
transcript_10972.known	chr1	-	803	2	FSM	ENSG00000183856.11	ENST00000498755.1	803	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAACAGCCCCACCCCAGC	1626	False	NA	NA	False	NA	NA	NA	156539465	156537175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156537322_156538808
transcript_109725.known	chr5	-	1565	2	FSM	ENSG00000272323.1	ENST00000606401.1	1565	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTCTTTTTTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	34839278	34837548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34839018_34839182
transcript_109727.known	chr5	+	348	3	FSM	ENSG00000205838.14	ENST00000508377.5	348	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCCTGTTTAGAGA	19	True	NA	NA	False	ACTAAA	-19	NA	34839213	34845713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34839260_34840664_34840740_34845486
transcript_109730.known	chr5	+	743	8	FSM	ENSG00000113460.13	ENST00000506023.1	743	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	411.35103436042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTGTAACACCAGC	30	False	NA	64	True	AAGAAA	-37	NA	34915751	34925345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34915898_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_109745.known	chr5	-	1328	7	FSM	ENSG00000113456.19	ENST00000513914.5	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	142.057206786562	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGGAAGATAGGAGCAA	2523	False	NA	-112	True	NA	NA	NA	34915615	34908654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34913926_34914027_34914694_34914962_34915415
transcript_10975.known	chr1	-	6013	38	FSM	ENSG00000183856.11	ENST00000361170.7	6013	38	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_19	6.87677196767481	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGTTAACCCTTAT	-11	True	NA	-4	True	AATAAA	-18	NA	156572565	156525404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548488_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
transcript_109751.known	chr5	-	4512	6	FSM	ENSG00000113456.19	ENST00000382038.7	4512	6	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	59.030161781923	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGTGTATAGTATTTTT	3	True	NA	0	True	AATAAA	-21	NA	34915504	34905259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
transcript_109760.known	chr5	-	1153	5	FSM	ENSG00000113456.19	ENST00000325577.8	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	109.984942151187	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCAGGACTGTCCTT	-6	True	NA	-11	True	AATAAA	-19	NA	34915548	34908553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
transcript_109767.known	chr5	-	664	4	FSM	ENSG00000113456.19	ENST00000511456.3	664	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	169.431074153736	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTGGATATGACGAGT	-10	True	NA	22	True	AATAAA	-38	NA	34915517	34911617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34911813_34913926_34914027_34914694_34914962_34915415
transcript_109773.known	chr5	-	1678	3	FSM	ENSG00000113456.19	ENST00000628399.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	174.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACGAAGATCGCTTGAGC	1369	False	NA	-117	True	NA	NA	NA	34916769	34913969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34914027_34914694_34914962_34915415
transcript_109774.known	chr5	-	574	2	FSM	ENSG00000113456.19	ENST00000506311.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTACAGAGATAATGGT	3	True	NA	NA	False	NA	NA	NA	34915504	34914476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34914962_34915415
transcript_109776.known	chr5	+	1591	10	FSM	ENSG00000113460.13	ENST00000336767.6	1591	10	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_9	58.1587864767177	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTGTGTTGAAAGC	-11	True	NA	NA	False	ATTAAA	-28	NA	34915710	34925996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_109777.known	chr5	-	263	2	FSM	ENSG00000113456.19	ENST00000512192.1	263	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCTCATGCATTATCAA	3337	False	NA	-18	True	AATAAA	-26	NA	34914801	34913870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34914027_34914694
transcript_109780.known	chr5	+	6208	13	FSM	ENSG00000168724.17	ENST00000382021.2	6208	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	78.5550054986243	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	-36	True	NA	8	True	AATAAA	-18	NA	34929592	34958964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34949542_34949678_34950169_34950343_34953925_34954002_34954552
transcript_109784.known	chr5	+	6107	12	FSM	ENSG00000168724.17	ENST00000648817.1	6107	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_8	24.2330284822489	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	13	True	NA	8	True	AATAAA	-18	NA	34929558	34958964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_109787.known	chr5	+	2338	12	FSM	ENSG00000168724.17	ENST00000642675.1	2338	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	77.9501854068268	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCGATTTTAAAAATT	29	False	NA	-25	True	AAAAAG	-29	NA	34929976	34955168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_109793.known	chr5	+	779	2	FSM	ENSG00000168724.17	ENST00000509626.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGGTTTAATATATATT	NA	False	NA	5	True	AAAACA	-3	NA	34953525	34954855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34954002_34954552
transcript_109795.known	chr5	+	3026	10	FSM	ENSG00000152582.14	ENST00000282469.10	3026	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.64341716741563	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACTGGTTCATCGAATG	-50	True	NA	NA	False	ATTAAA	-20	NA	35617843	35671575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_35618056_35628459_35628563_35641430_35641684_35644354_35644526_35646666_35646808_35649360_35649426_35654539_35654727_35659018_35659208_35667071_35667260_35670058
transcript_109799.known	chr5	-	665	5	FSM	ENSG00000152611.12	ENST00000513623.5	665	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.78535710713571	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTGACACTGATGTGTA	NA	False	NA	NA	False	NA	NA	NA	35938635	35904601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_35904647_35909865_35910076_35910365_35910544_35920983_35921121_35938540
transcript_1098.known	chr1	+	1138	5	FSM	ENSG00000225077.3	ENST00000441724.1	1138	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.41740410091868	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGACTGTTGCCACTCG	NA	False	NA	NA	False	NA	NA	NA	6236239	6238940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6236337_6236965_6237151_6237244_6237346_6237813_6237849_6238220
transcript_10980.known	chr1	-	1159	8	FSM	ENSG00000160818.17	ENST00000438976.6	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	170.172061785256	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGAAGCAGGAAAAGCA	5	True	NA	-16	True	NA	NA	NA	156601470	156595212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599031_156601408
transcript_109800.known	chr5	-	4918	7	FSM	ENSG00000145626.12	ENST00000274278.8	4918	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.04611904907235	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTAGTCTATTGAGTAA	5	True	NA	NA	False	AAAAAG	-14	NA	35991390	35951005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35991146
transcript_109803.nic	chr5	-	1340	4	ISM	ENSG00000145626.12	ENST00000333811.5	1114	5	-14	2222	-14	-2222	5prime_fragment	FALSE	canonical	3	30	junction_1	4.10960933531265	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTTGTGTGATTAT	-1	True	NA	NA	False	ATTAAA	-20	NA	35991447	35965095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_35965918_35968018_35968134_35988449_35988552_35991146
transcript_109804.known	chr5	-	5002	8	FSM	ENSG00000145626.12	ENST00000515801.5	5002	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2330958285717	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACTGTCAAATGCAT	9419	False	NA	-18	True	AATAAA	-16	NA	35991605	35953107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_35954479_35954818_35955865_35957187_35957420_35961988_35962952_35965385_35965918_35968018_35968134_35988449_35988552_35990964
transcript_109805.nic	chr5	-	1054	4	ISM	ENSG00000145626.12	ENST00000333811.5	1114	5	-14	2508	-14	-2508	5prime_fragment	FALSE	canonical	3	30	junction_1	4.10960933531265	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAACCCTCAGCATTCAGT	-1	True	NA	NA	False	ATTAAA	-17	NA	35991447	35965381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_35965918_35968018_35968134_35988449_35988552_35991146
transcript_109810.known	chr5	-	1924	6	FSM	ENSG00000168671.10	ENST00000513300.5	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	77.0158425260673	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTCCATGTCCAGACC	13	True	NA	-97	True	NA	NA	NA	36066882	36035336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36066695
transcript_109816.known	chr5	-	2342	7	FSM	ENSG00000168671.10	ENST00000282507.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	24.5181338785987	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGATTGGCCAAGAGA	13	True	NA	-19	True	AATAAA	-31	NA	36066882	36035020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36064248_36064351_36066695
transcript_109817.known	chr5	-	8116	18	FSM	ENSG00000164187.7	ENST00000296603.5	8116	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	6.27346805077407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTATGTTTGAAAG	11	True	NA	1	True	AATAAA	-26	NA	36151887	36098406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36104107_36105067_36105198_36108533_36108640_36109944_36109992_36111154_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151555
transcript_109818.nic	chr5	-	883	4	ISM	ENSG00000164187.7	ENST00000296603.5	8116	18	-60	42634	-60	0	5prime_fragment	FALSE	canonical	3	40	junction_1	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTTGGAATTTATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	36151947	36141040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_36141203_36142501_36142600_36143175_36143407_36151555
transcript_109821.known	chr5	-	1437	13	FSM	ENSG00000152620.13	ENST00000506945.5	1437	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_12	50.1250519534228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGACATTCACTGTA	NA	False	NA	NA	False	NA	NA	NA	36242279	36194985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36208624_36208691_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
transcript_109827.known	chr5	-	2507	12	FSM	ENSG00000152620.13	ENST00000282512.7	2507	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	35.2738987621768	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTTTGATGTATATC	28	False	NA	-7	True	AATAAA	-20	NA	36242142	36193712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
transcript_109829.known	chr5	-	4011	12	FSM	ENSG00000152620.13	ENST00000381937.9	4011	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	15.9192175562528	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATTTCACTTTTTAAT	-12	True	NA	NA	False	ATTAAA	-21	NA	36241925	36192588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36241498
transcript_109840.known	chr5	+	3715	10	FSM	ENSG00000145604.17	ENST00000274255.11	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_9	86.5778747432722	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACATATGTATACATGTG	-16	True	NA	NA	False	TTTAAA	-45	NA	36152110	36184319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_109841.known	chr5	+	1537	10	FSM	ENSG00000145604.17	ENST00000274254.9	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	162.959435988769	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTGTATTCCTTTTTT	NA	False	NA	29	True	AATAAA	-30	NA	36151988	36184041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_109848.known	chr5	+	3299	9	FSM	ENSG00000145604.17	ENST00000620197.5	3299	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	236.944481893966	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATTTTTATAAAAATG	-43	True	NA	-1	True	TTTAAA	-8	NA	36152083	36184011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_109849.nic	chr5	+	1296	9	NIC	ENSG00000145604.17	novel	1537	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	268.596816809135	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCTTAAACTAAGTTG	-44	True	NA	17	True	AATAAA	-18	NA	36152082	36184029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_109851.known	chr5	+	3294	9	FSM	ENSG00000145604.17	ENST00000677911.1	3294	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	227.784403274236	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACACATTTTTATAA	-20	True	NA	-6	True	TTTAAA	-3	NA	36152106	36184006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_109852.nic	chr5	+	1334	9	NIC	ENSG00000145604.17	novel	1537	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_2	261.491365775239	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCTTAAACTAAGTTG	1	True	NA	17	True	AATAAA	-18	NA	36152067	36184029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_109865.known	chr5	+	821	5	FSM	ENSG00000145604.17	ENST00000508514.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	312.821334790324	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTTAGAACAGGGAAAATA	-5	True	NA	NA	False	NA	NA	NA	36152121	36182057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36176964_36177017_36177184_36177293_36181817
transcript_109866.nic	chr5	+	922	5	NIC	ENSG00000145604.17	novel	1537	10	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	339.431417962451	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCTTAAACTAAGTTG	NA	False	NA	17	True	AATAAA	-18	NA	36151970	36184029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_36152271_36152770_36153043_36176964_36177017_36177184_36177293_36183839
transcript_109870.known	chr5	+	4027	11	FSM	ENSG00000079215.15	ENST00000680655.1	4027	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	29.809562224226	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACATCTTTGCACGTTGT	387	False	NA	14	True	AATAAA	-19	NA	36606595	36688330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36629942_36630045_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_109872.known	chr5	+	3919	10	FSM	ENSG00000079215.15	ENST00000265113.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	9.27095557555696	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	-7	True	NA	18	True	AATAAA	-23	NA	36606605	36688334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_109875.known	chr5	+	4194	11	FSM	ENSG00000079215.15	ENST00000680232.1	4194	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	32.2527518205811	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAACATCTTTGCACGT	256	False	NA	11	True	AATAAA	-16	NA	36606464	36688327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679349_36679491_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_109876.known	chr5	+	1204	5	FSM	ENSG00000079215.15	ENST00000502864.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	36.9349089615773	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGACATGAGGGCACATG	387	False	NA	NA	False	NA	NA	NA	36606595	36630962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36629942_36630045_36630414
transcript_109877.nic	chr5	+	1195	5	NIC	ENSG00000079215.15	novel	3699	5	NA	NA	-30	376	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	34.5723878261251	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTGTTTTACATACAAA	357	False	NA	NA	False	AATAAA	-22	NA	36606565	36671789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36671383
transcript_109880.nic	chr5	+	556	3	NIC	ENSG00000079215.15	novel	2368	3	NA	NA	-30	-12	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	44.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATCTTAAAAGTTATAGT	357	False	NA	NA	False	AATAAA	-24	NA	36606565	36609287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_36606736_36608328_36608605_36609177
transcript_109881.known	chr5	+	2368	3	FSM	ENSG00000079215.15	ENST00000681775.1	2368	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTTGTGTAATTTTT	387	False	NA	NA	False	AAGAAA	-6	NA	36606595	36631401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449
transcript_109883.known	chr5	+	583	3	FSM	ENSG00000079215.15	ENST00000504121.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAAATGGTAGCCTAGG	-2	True	NA	67	True	NA	NA	NA	36606610	36608698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36607223_36607312_36608328
transcript_109886.known	chr5	+	550	3	FSM	ENSG00000079215.15	ENST00000681776.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGGATGTTAAAAGTTA	322	False	NA	-97	True	AAGAAA	-16	NA	36606530	36608534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36607172_36607312_36608328
transcript_109889.known	chr5	-	589	3	FSM	ENSG00000250155.2	ENST00000508745.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATTGAATTTATGATGA	-11	True	NA	NA	False	NA	NA	NA	36725195	36702629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36702965_36705679_36705852_36725113
transcript_109892.known	chr5	+	1096	2	FSM	ENSG00000079215.15	ENST00000512374.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGTTTATTACTTATG	-2	True	NA	NA	False	AATAAA	-36	NA	36606610	36609299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328
transcript_109898.known	chr5	+	906	6	FSM	ENSG00000079215.15	ENST00000680711.1	906	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.5613267542955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTCATTTCACTGATG	10	True	NA	NA	False	TATAAA	-6	NA	36606622	36674649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36674518
transcript_109899.known	chr5	+	10425	47	FSM	ENSG00000164190.19	ENST00000282516.13	10425	47	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	29.6586519125587	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAGGATCTATTTCCT	7	True	NA	8	True	ATTAAA	-16	NA	36876768	37066413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372_37000571_37000816_37000889_37000988_37001079_37002661_37002766_37003260_37003348_37006356_37006589_37007322_37007475_37008007_37008089_37008622_37008724_37010086_37010226_37014682_37014766_37016037_37016171_37017018_37017163_37019310_37019401_37020458_37020674_37020774_37020878_37022050_37022150_37022243_37022391_37024584_37024720_37026228_37026328_37027358_37027413_37036378_37036488_37038601_37038739_37044346_37044488_37044635_37044730_37045442_37045598_37046108_37046200_37048501_37048676_37049110_37049302_37051778_37051887_37052365_37052567_37057185_37057333_37058890_37059166_37060843_37061019_37063789_37063979_37064526
transcript_109902.nic	chr5	+	1498	9	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-40	88293	-19	0	5prime_fragment	FALSE	canonical	3	28	junction_1	5.23061898822692	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGGCAAGGATGAAAAAGA	-12	True	NA	NA	False	AAGAAA	-26	NA	36876749	36975897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775
transcript_109903.nic	chr5	+	1182	3	ISM	ENSG00000164190.19	ENST00000448238.2	8729	46	-40	108109	-19	-19816	5prime_fragment	FALSE	canonical	3	28	junction_1	3	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGCGG	-12	True	NA	NA	False	AATACA	-16	NA	36876749	36956081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_36877179_36953617_36953761_36955471
transcript_109905.known	chr5	+	426	2	FSM	ENSG00000286193.3	ENST00000651145.2	493	2	67	0	16	0	multi-exon	FALSE	canonical	1	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCAGACACTATGCT	20	False	NA	NA	False	AATAAA	-17	NA	37249045	37250646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_37249222_37250396
transcript_109906.known	chr5	-	8068	35	FSM	ENSG00000113569.16	ENST00000231498.8	8068	35	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_17	38.2707527889267	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCTTCCATTAAAT	-11	True	NA	-7	True	AATAAA	-15	NA	37371106	37288136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_10991.known	chr1	+	1111	6	FSM	ENSG00000163382.13	ENST00000368235.8	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_3	73.963774917185	2616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGCTGTCCTTTA	-6	True	NA	28	True	AATGAA	-21	NA	156591775	156594299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593881
transcript_109916.known	chr5	+	2877	18	FSM	ENSG00000082068.9	ENST00000265107.9	2877	18	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_11	19.1088667619861	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGCTTTAGTGACTA	-9	True	NA	NA	False	ATTAAA	-16	NA	37379317	37753435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
transcript_109925.nnic	chr5	+	510	5	NNC	ENSG00000082068.9	novel	1526	12	NA	NA	-65	11798	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	101.0331010115	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTGGTCATTTGGAAGC	NA	False	NA	NA	False	ATTAAA	-20	NA	37379219	37393607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37393541
transcript_109930.known	chr5	+	365	3	FSM	ENSG00000082068.9	ENST00000505799.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	13	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGCCAAGGCGGGCA	0	True	NA	NA	False	NA	NA	NA	37379301	37381809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_37379393_37379488_37379555_37381601
transcript_109935.known	chr5	+	3819	4	FSM	ENSG00000248587.8	ENST00000637926.1	3819	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGAGACATTCTGTT	NA	False	NA	NA	False	NA	NA	NA	37839883	37953827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_37840039_37913529_37913698_37948160_37948386_37950556
transcript_10994.known	chr1	+	2176	6	FSM	ENSG00000163382.13	ENST00000680087.1	2176	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	746.184052362418	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCAGGCCCTCTGTTTC	-16	True	NA	NA	False	NA	NA	NA	156591765	156598179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156596706
transcript_10995.known	chr1	+	901	6	FSM	ENSG00000163382.13	ENST00000368234.7	901	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_4	720.630446206653	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAACTGTGGATTCC	-20	True	NA	-23	True	AATAAA	-17	NA	156591761	156594131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593463_156593556_156593881
transcript_109971.nnic	chr5	-	985	4	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	19.0262975904404	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCATACTTCTCTCTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	38341399	38311919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38312581_38316870_38317024_38325773_38325817_38341271
transcript_109975.nnic	chr5	-	2092	4	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	14.522013940528	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTGTTTGGCTCAAA	NA	False	NA	-26	True	GATAAA	-15	NA	38341399	38313174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38314943_38316870_38317024_38325773_38325817_38341271
transcript_109994.nnic	chr5	-	498	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	26	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAGAGATAGAGAAGA	NA	False	NA	NA	False	NA	NA	NA	38341399	38300376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38300704_38325773_38325817_38341271
transcript_109998.nnic	chr5	-	913	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	6.5	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCATACTTCTCTCTTTT	NA	False	NA	-8	True	AATAAA	-15	NA	38341370	38311919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38312581_38316870_38317024_38341271
transcript_11.known	ERCC-00031	+	1122	1	FSM	ERCC-00031A	DQ459431	1122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00031_+_0_1100
transcript_110001.nnic	chr5	-	2020	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	1.5	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGTGTTTGGCTCAAA	NA	False	NA	-26	True	GATAAA	-15	NA	38341370	38313174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38314943_38316870_38317024_38341271
transcript_110006.nnic	chr5	-	699	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	22	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCCCTTCCTGGCAGAC	NA	False	NA	21	True	AAAACA	-9	NA	38341399	38317435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38317964_38325773_38325817_38341271
transcript_110010.nnic	chr5	-	345	3	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	4	149	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATATAGTGCGCCAGTAT	NA	False	NA	-15	True	AGTAAA	-23	NA	38341371	38325691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38325817_38336287_38336408_38341271
transcript_110014.nnic	chr5	-	415	2	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGATAGAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	38341358	38300375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38300704_38341271
transcript_110017.nnic	chr5	-	253	2	Antisense	novelGene_ENSG00000164318.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	54	junction_1	0	90	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATATAGTGCGCCAGTAT	NA	False	NA	-15	True	AGTAAA	-23	NA	38341399	38325691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_38325817_38341271
transcript_11002.known	chr1	+	1012	5	FSM	ENSG00000163382.13	ENST00000368233.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_3	66.6352009076284	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGATGGGACGTGGAGA	-4	True	NA	NA	False	NA	NA	NA	156591777	156593876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407
transcript_110071.nnic	chr5	-	1186	5	NNC	ENSG00000248730.1	novel	1579	4	NA	NA	-50377	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	5.2618912949623	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTAAGTTCTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	38341363	38282263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_38282602_38283922_38284104_38285170_38285367_38285982_38286362_38341271
transcript_11008.known	chr1	+	6317	5	FSM	ENSG00000163382.13	ENST00000680529.1	6317	5	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_2	73.6117347981964	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACTTGAGCCCAGGAG	-6	True	NA	NA	False	NA	NA	NA	156591775	156599350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592476_156592556_156592671_156593407_156593556_156593881
transcript_110092.nnic	chr5	-	790	4	NNC	ENSG00000248730.1	novel	1579	4	NA	NA	-50403	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.0921211313239	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTAAGTTCTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	38341389	38282263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_38282602_38283922_38284104_38316870_38317024_38341271
transcript_110094.nnic	chr5	-	725	4	NNC	ENSG00000248730.1	novel	1579	4	NA	NA	-50371	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.78888096369861	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTAAGTTCTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	38341357	38282263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_38282602_38283922_38284104_38336287_38336408_38341271
transcript_110108.nnic	chr5	-	607	3	NNC	ENSG00000248730.1	novel	1579	4	NA	NA	-50373	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	3	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTAAGTTCTGTT	NA	False	NA	-4	True	AATAAA	-16	NA	38341359	38282263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_38282602_38283922_38284104_38341271
transcript_110116.nnic	chr5	-	796	2	NNC	ENSG00000248730.1	novel	1579	4	NA	NA	-50377	-3394	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTAGTCTCTGGCAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	38341363	38285657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_38286362_38341271
transcript_110118.known	chr5	+	2690	3	FSM	ENSG00000244968.7	ENST00000652922.1	2690	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATGAGAAAAGCAAAAAA	8	True	NA	NA	False	AATGAA	-24	NA	38556791	38615729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_38559178_38594921_38595070_38615573
transcript_110123.nic	chr5	-	1335	11	ISM	ENSG00000164327.13	ENST00000296782.9	7505	39	-12	31528	-12	-1861	5prime_fragment	FALSE	canonical	3	22	junction_3	4.12310562561766	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCTGGGCAT	-16	True	NA	NA	False	NA	NA	NA	39074411	38971547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_38971960_38975536_38975605_38978582_38978651_38981866_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
transcript_110128.known	chr5	-	1762	8	FSM	ENSG00000164327.13	ENST00000513566.1	1762	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	1.98976975388345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGGCTCTGTGTTTTGCT	-4	True	NA	NA	False	AATAAA	-11	NA	39074399	38980879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
transcript_110130.known	chr5	-	4345	15	FSM	ENSG00000153071.15	ENST00000320816.11	4345	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	8.01783725737273	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTACCATCGGTTT	1	True	NA	-2	True	AATAAA	-43	NA	39424980	39371676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_110132.known	chr5	-	3690	14	FSM	ENSG00000153071.15	ENST00000339788.10	3690	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	12.0423316462922	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGTGGTACCATCGGTT	1	True	NA	-3	True	AATAAA	-42	NA	39424980	39371677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_110133.nic	chr5	-	1823	9	ISM	ENSG00000153071.15	ENST00000339788.10	3690	14	-250	16019	3	0	5prime_fragment	FALSE	canonical	3	25	junction_2	6.65089279721151	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAATAAAAAGGAA	-19	True	NA	NA	False	ATTAAA	-31	NA	39425230	39387696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_110135.known	chr5	-	4537	14	FSM	ENSG00000153071.15	ENST00000545653.5	4537	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	12.5504897473927	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTACCATCGGTTTAT	-22	True	NA	0	True	AATAAA	-45	NA	39425233	39371674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_110137.nnic	chr5	-	2605	5	NNC	ENSG00000113638.14	novel	5497	5	NA	NA	74	661	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	48.447781166943	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGATTTTCCTATTA	96	False	NA	-7	True	AATAAA	-16	NA	40755834	40714474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_40716499_40728344_40728477_40730261_40730344_40746797_40747020_40755689
transcript_110138.known	chr5	-	5497	5	FSM	ENSG00000113638.14	ENST00000337702.5	5497	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	20.8386659841747	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGTGGACATATGT	-31	True	NA	-12	True	AATAAA	-24	NA	40755961	40711575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40716499_40728344_40728477_40730261_40730344_40746797_40747020_40755823
transcript_110141.known	chr5	-	784	4	FSM	ENSG00000113638.14	ENST00000511730.2	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	56.0971379741328	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCATAGGATTAT	-19	True	NA	NA	False	NA	NA	NA	40755949	40716144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40716499_40730261_40730344_40746797_40747020_40755823
transcript_110143.known	chr5	-	1707	3	FSM	ENSG00000113638.14	ENST00000503936.6	1707	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	61	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGTTATTAGAGTGCCA	-15	True	NA	NA	False	AATAAA	-7	NA	40755945	40715135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40716499_40746797_40747020_40755823
transcript_110145.known	chr5	-	1149	4	FSM	ENSG00000113638.14	ENST00000636863.1	1149	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.868374140461	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGATTTAACTTTATT	22	True	NA	NA	False	AATAAA	-10	NA	40755908	40512332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40513070_40603931_40604037_40746797_40747020_40755823
transcript_110146.known	chr5	-	1918	10	FSM	ENSG00000132356.12	ENST00000354209.7	1918	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	56.7145766966178	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTATTTCTTTTGCA	8	True	NA	-8	True	AATAAA	-8	NA	40798374	40762769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40774927_40774973_40775409_40775504_40777444_40777587_40798062
transcript_110148.known	chr5	-	5088	9	FSM	ENSG00000132356.12	ENST00000397128.7	5254	9	176	-10	-9	10	multi-exon	FALSE	canonical	3	125	junction_1	12.9034879005639	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTACTTATGTTTTTTA	215	False	NA	1	True	AATAAA	-26	NA	40798198	40759378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
transcript_11015.known	chr1	-	2154	8	FSM	ENSG00000160818.17	ENST00000368232.9	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	402	junction_2	46.244249504613	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTAACAGTCCAT	-4	True	NA	-10	True	AATGAA	-31	NA	156601479	156594300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_110157.nic	chr5	-	1245	3	ISM	ENSG00000132356.12	ENST00000296800.4	1134	6	-46	6174	-31	2457	5prime_fragment	FALSE	canonical	3	142	junction_1	13	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTCTGCCTGGA	193	False	NA	NA	False	NA	NA	NA	40798220	40774558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_40775504_40777444_40777587_40798062
transcript_110158.known	chr5	-	425	3	FSM	ENSG00000132356.12	ENST00000397006.2	425	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCCTGTAATACCAGCTAC	5	True	NA	NA	False	AGTAAA	-31	NA	40798170	40777159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40777335_40777444_40777587_40798062
transcript_110159.known	chr5	-	668	2	FSM	ENSG00000132356.12	ENST00000511248.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCCATTCATGTAT	254	False	NA	NA	False	AATAAA	-2	NA	40798159	40777015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40777587_40798062
transcript_11016.known	chr1	+	529	2	FSM	ENSG00000163382.13	ENST00000488840.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	1750	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCAGAACTGTGGATT	704	False	NA	-25	True	AATAAA	-15	NA	156593274	156594129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156593556_156593881
transcript_110162.known	chr5	-	1082	7	FSM	ENSG00000132356.12	ENST00000506652.5	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	12.3782964184181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATTCTTGGTTGCTGAA	265	False	NA	NA	False	NA	NA	NA	40798148	40764936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
transcript_110167.known	chr5	-	505	4	FSM	ENSG00000145592.14	ENST00000504562.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_3	5211.97367180184	52485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATCTGGTTTTGGTAA	2	True	NA	-33	True	AATAAA	-19	NA	40835186	40832457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835018
transcript_11017.known	chr1	-	934	7	FSM	ENSG00000160818.17	ENST00000415314.6	934	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	180.575930474321	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGGCACCATGAAGAGG	NA	False	NA	17	True	AAAAAG	-3	NA	156601490	156595444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_110172.known	chr5	-	7573	4	FSM	ENSG00000145592.14	ENST00000274242.10	7573	4	0	0	0	0	multi-exon	FALSE	canonical	3	8479	junction_3	1607.97104727942	99196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTTTTGCAGCAAATT	-5	True	NA	NA	False	AATAAA	-18	NA	40835222	40825261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835182
transcript_110173.known	chr5	-	425	4	FSM	ENSG00000145592.14	ENST00000507642.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5773.95883832459	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGTAAGGTATTTTTA	1044	False	NA	-23	True	AATAAA	-29	NA	40834607	40832447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40832574_40833960_40834038_40834180_40834266_40834470
transcript_110176.known	chr5	-	7706	3	FSM	ENSG00000182836.10	ENST00000377801.8	7706	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTTTTATTTTAAT	-19	True	NA	-17	True	AATAAA	-17	NA	41510601	41306951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_41313771_41381825_41382535_41510423
transcript_11018.known	chr1	-	532	6	FSM	ENSG00000160818.17	ENST00000531129.5	532	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	174.238916433729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTAGTGGTCAGCTCCTT	-4	True	NA	NA	False	NA	NA	NA	156601479	156596079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598967_156599105_156601408
transcript_110181.known	chr5	-	3294	17	FSM	ENSG00000083720.13	ENST00000196371.10	3294	17	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	24.1828160839469	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTGACTGTCCTTT	-1	True	NA	-1	True	AATAAA	-18	NA	41870425	41730064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_41731771_41739389_41739492_41749526_41749608_41762110_41762201_41794002_41794079_41794676_41794750_41801021_41801071_41803068_41803164_41805566_41805682_41807330_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_11019.nnic	chr1	-	626	4	Genic_Genomic	ENSG00000272971.1	novel	547	1	NA	NA	-9225	-5	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTTCTTAGCCCA	624	False	NA	NA	False	AATAAA	-17	NA	156624513	156614746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_156615078_156621879_156621953_156622950_156623027_156624367
transcript_110193.nic	chr5	-	1265	8	ISM	ENSG00000083720.13	ENST00000196371.10	3294	17	-376	77284	-376	-57748	5prime_fragment	FALSE	canonical	3	186	junction_2	23.1375655326033	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGAGAAAAGAATTGAGGT	NA	False	NA	NA	False	TATAAA	-11	NA	41870801	41807348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_110195.known	chr5	+	5246	6	FSM	ENSG00000205765.10	ENST00000381647.7	5246	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	16.5093912667912	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTGTTTTATATT	-5	True	NA	5	True	AATAAA	-15	NA	41904343	41921636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047_41911180_41912068_41912184_41917015
transcript_110198.nic	chr5	+	3082	5	ISM	ENSG00000205765.10	ENST00000381647.7	5246	6	-28	7024	-28	3279	5prime_fragment	FALSE	canonical	3	244	junction_4	18.4306131205666	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTAGCCAGGCGT	-2	True	NA	NA	False	ACTAAA	-7	NA	41904315	41914612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047_41911180_41912068
transcript_110200.nnic	chr5	+	378	2	NNC	ENSG00000205765.10	novel	637	4	NA	NA	-22	-6372	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAAATTAGTTATGGTG	4	True	NA	NA	False	AATAAA	-39	NA	41904321	41904807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_41904468_41904575
transcript_110201.known	chr5	+	637	4	FSM	ENSG00000205765.10	ENST00000509976.1	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	15.5777619273972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGTGAAGACTAAATCA	22	False	NA	NA	False	AATAAA	-7	NA	41904370	41911333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047
transcript_110203.known	chr5	+	1655	7	FSM	ENSG00000151876.13	ENST00000281623.8	1655	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.26691175145591	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTGGAATTGCATTTAA	12	True	NA	NA	False	AATAAA	-24	NA	41925280	41941743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_41925499_41927012_41927249_41929696_41929918_41933945_41934022_41934132_41934309_41939440_41939617_41941191
transcript_110205.known	chr5	+	1284	6	FSM	ENSG00000151876.13	ENST00000509134.1	1284	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.78567765543682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTGCCTCTCATTCC	32	True	NA	NA	False	ATTAAA	-14	NA	41925300	41941568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_41925499_41927012_41927249_41929696_41929918_41933945_41934022_41934132_41934309_41941191
transcript_110209.known	chr5	+	3493	9	FSM	ENSG00000198865.10	ENST00000361970.10	3493	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	15.4550760269887	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGTACTTTATTTGG	-19	True	NA	13	True	ATTAAA	-17	NA	42756817	42802439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828_42796957_42799374_42799459_42799658
transcript_11021.nnic	chr1	+	1135	5	NNC	ENSG00000132692.19	novel	3297	14	NA	NA	98	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	11.6726175299288	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	NA	False	NA	8	True	AATAAA	-22	NA	156656826	156659528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_156657041_156657674_156657758_156658126_156658272_156658542_156658734_156659026
transcript_110216.known	chr5	+	1237	7	FSM	ENSG00000198865.10	ENST00000388827.4	1237	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	43.5561578756539	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGAAAGCATGTC	-19	True	NA	NA	False	AGTAAA	-2	NA	42756817	42800351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42796828_42796957_42799374_42799459_42799658
transcript_110217.known	chr5	-	787	6	FSM	ENSG00000250722.6	ENST00000510965.1	787	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	225.375597614294	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAATCATGGACATCAG	-2	True	NA	NA	False	GATAAA	-41	NA	42811893	42801237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42810690_42810779_42811835
transcript_110219.known	chr5	-	1853	6	FSM	ENSG00000250722.6	ENST00000511224.5	1853	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	228.301029345029	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTCTAAAACTTGAG	-1	True	NA	11	True	AATAAA	-34	NA	42811892	42800111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42809759_42809789_42811835
transcript_11022.nic	chr1	+	1175	5	ISM	ENSG00000132692.19	ENST00000329117.10	3297	14	14726	0	114	0	3prime_fragment	FALSE	canonical	3	21	junction_3	3.53553390593274	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	NA	False	NA	8	True	AATAAA	-22	NA	156656842	156659528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
transcript_110228.known	chr5	-	2056	5	FSM	ENSG00000250722.6	ENST00000514985.6	2056	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	116.233332138419	2402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-1	True	NA	-2	True	AATAAA	-24	NA	42811892	42799879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42811835
transcript_110230.known	chr5	+	2599	8	FSM	ENSG00000172262.12	ENST00000510026.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	60.8199081262854	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	-4	True	NA	NA	False	NA	NA	NA	43120917	43175734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161614_43161708_43161932_43173317_43173449_43174446
transcript_110232.known	chr5	+	2400	8	FSM	ENSG00000172262.12	ENST00000306938.8	2400	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	51.6550568478942	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCCAC	13	True	NA	NA	False	NA	NA	NA	43121539	43175719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121569_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_110235.known	chr5	+	3209	8	FSM	ENSG00000172262.12	ENST00000505606.6	3209	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	39.1397287592408	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGACTCTTTTTTAAAA	32	False	NA	23	True	AGTAAA	-16	NA	43121595	43176324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_110238.known	chr5	+	3286	7	FSM	ENSG00000172262.12	ENST00000682664.1	3286	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	46.9136322286911	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGACTCTTTTTTAA	-8	True	NA	21	True	AGTAAA	-14	NA	43120913	43176322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_11024.nnic	chr1	+	1030	4	NIC	ENSG00000132692.19	novel	3297	14	NA	NA	114	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	10.8730042868667	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	NA	False	NA	8	True	AATAAA	-22	NA	156656842	156659528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156657097_156657674_156657758_156658542_156658734_156659026
transcript_110247.known	chr5	+	1050	6	FSM	ENSG00000172262.12	ENST00000515326.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	49.3906873813273	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGCGCATGGAAACAGC	NA	False	NA	NA	False	AATAAA	-12	NA	43120882	43161773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708
transcript_110248.known	chr5	+	501	5	FSM	ENSG00000172262.12	ENST00000508259.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.4733992368752	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCACTGAGTCATTGC	6	True	NA	NA	False	AAAAAG	-22	NA	43121532	43161332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121569_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_110249.known	chr5	+	572	5	FSM	ENSG00000172262.12	ENST00000509341.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	61.8182820854802	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGGCCAAAAAAAGGAA	53	False	NA	NA	False	AAGAAA	-36	NA	43121683	43161294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121829_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_11025.known	chr1	-	5568	4	FSM	ENSG00000132688.11	ENST00000368223.4	5568	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.86744175568088	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGACTCTTCTTTCCCC	0	True	NA	-1	True	AATAAA	-20	NA	156677407	156668762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156673206_156673453_156673528_156675215_156675341_156676481
transcript_110258.known	chr5	+	750	3	FSM	ENSG00000172262.12	ENST00000503599.5	750	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGACTCTGTCTCTAA	57	False	NA	NA	False	NA	NA	NA	43065175	43080343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43065234_43067969_43068218_43079899
transcript_110260.nnic	chr5	+	1497	3	NNC	ENSG00000172262.12	novel	990	3	NA	NA	-587	4	intron_retention	FALSE	canonical	3	4	junction_2	2	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCTAAGCGTCCTTTAA	572	False	NA	NA	False	TATAAA	-25	NA	43066993	43080507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_43067635_43067969_43068218_43079899
transcript_110262.nnic	chr5	+	1255	3	NNC	ENSG00000172262.12	novel	476	3	NA	NA	-587	47	intron_retention	FALSE	canonical	0	0	junction_2	4	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTACCTGGGCTT	572	False	NA	NA	False	AATACA	-7	NA	43066993	43099385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_43067635_43067969_43068218_43099019
transcript_110268.nnic	chr5	+	1730	2	NNC	ENSG00000172262.12	novel	990	3	NA	NA	-587	-11285	intron_retention	FALSE	canonical	3	8	junction_1	0	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGATATTTCTT	572	False	NA	NA	False	ATTAAA	-21	NA	43066993	43069058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_43067635_43067969
transcript_110271.known	chr5	+	3340	7	FSM	ENSG00000172262.12	ENST00000509634.5	3340	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	21.694853460364	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	34	False	NA	16	True	AATAAA	-17	NA	43121597	43176247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_110272.known	chr5	+	970	3	FSM	ENSG00000172262.12	ENST00000509931.5	970	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	82	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGACCAATATGCTATTTT	408	False	NA	13	True	AATAAA	-14	NA	43122038	43176244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43122178_43123208_43123251_43175455
transcript_110273.known	chr5	+	1927	2	FSM	ENSG00000172262.12	ENST00000510037.1	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTTATCATATTGAAT	458	False	NA	NA	False	NA	NA	NA	43122088	43125046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43122178_43123208
transcript_110275.known	chr5	+	1218	3	FSM	ENSG00000215068.9	ENST00000451894.6	1218	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCCCCTCCCACCATA	1	True	NA	NA	False	NA	NA	NA	43041574	43045264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43041875_43043471_43043568_43044442
transcript_110276.known	chr5	-	646	3	FSM	ENSG00000177738.5	ENST00000503152.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTATTTATTTATT	-5	True	NA	89	True	GATAAA	-40	NA	43067452	43014730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43015151_43067086_43067158_43067297
transcript_110277.known	chr5	-	2388	2	FSM	ENSG00000177738.5	ENST00000314957.3	2388	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATATTAACCCAAGG	942	False	NA	NA	False	NA	NA	NA	43018724	43014413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43015151_43017073
transcript_110278.known	chr5	-	768	2	FSM	ENSG00000177738.5	ENST00000665537.1	768	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATTTATTTATTTA	11	True	NA	87	True	GATAAA	-38	NA	43067436	43014732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43015151_43067086
transcript_110279.known	chr5	+	920	1	FSM	ENSG00000272382.1	ENST00000607830.1	920	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTGCCTGTGTTCCT	NA	False	NA	8	True	AATAAA	-20	NA	43033715	43034635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43033700_43034600
transcript_110280.known	chr5	+	402	3	FSM	ENSG00000215068.9	ENST00000505541.1	402	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTTCAAGCGCTTGAA	15	True	NA	NA	False	AAAACA	-3	NA	43041756	43044886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43041875_43043471_43043568_43044698
transcript_110284.known	chr5	-	5350	11	FSM	ENSG00000112972.15	ENST00000325110.11	5350	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_10	43.6312961072669	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTCTCAGGCTCTGT	-1	True	NA	-1	True	AATAAA	-15	NA	43313412	43287469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43307765_43307825_43313355
transcript_110285.known	chr5	-	3466	10	FSM	ENSG00000112972.15	ENST00000433297.2	3466	10	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	36.3318042491699	1939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	NA	False	NA	-8	True	AATAAA	-20	NA	43313512	43289394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43313355
transcript_110286.known	chr5	+	643	2	FSM	ENSG00000261604.1	ENST00000569313.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACATCATGCATACAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	43289394	43290839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43289666_43290467
transcript_110294.known	chr5	-	1927	4	FSM	ENSG00000151881.15	ENST00000512085.5	1927	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.7123616632825	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGGAAATTTGCTTTT	-28	True	NA	89	True	AATAAA	-1	NA	43483891	43445237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43446558_43453657_43454044_43454454_43454606_43483821
transcript_110296.known	chr5	-	736	4	FSM	ENSG00000151881.15	ENST00000506860.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	33.9542175419916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGGCTTTATGTAAT	6	True	NA	NA	False	NA	NA	NA	43483857	43446341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43446558_43453657_43454044_43479889_43479988_43483821
transcript_110300.known	chr5	-	721	3	FSM	ENSG00000151881.15	ENST00000510130.1	721	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGTTTTTTTCTATTT	-2	True	NA	NA	False	AATATA	-3	NA	43483865	43445978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43446558_43479889_43479988_43483821
transcript_110305.nic	chr5	-	713	2	ISM	ENSG00000151881.15	ENST00000506860.1	736	4	-30	32999	4	-32999	5prime_fragment	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATTACATTTGTAAGC	-24	True	NA	NA	False	AAAAAG	-10	NA	43483887	43479340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_43479988_43483821
transcript_110306.known	chr5	-	2736	3	FSM	ENSG00000151881.15	ENST00000397080.8	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	6.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTTGTCATAACT	-2	True	NA	NA	False	AATAAA	-35	NA	43483865	43444251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43446558_43453657_43454044_43483821
transcript_110308.known	chr5	-	2502	13	FSM	ENSG00000172244.9	ENST00000306862.7	2502	13	0	0	0	0	multi-exon	TRUE	canonical	2	47	junction_12	15.4919333848297	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	2	True	NA	-9	True	AATAAA	-15	NA	43515148	43486708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
transcript_110309.nic	chr5	-	2280	12	NIC	ENSG00000172244.9	novel	2502	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_11	21.8809702596602	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	-7	True	NA	-9	True	AATAAA	-15	NA	43515157	43486708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43514805
transcript_110312.nic	chr5	-	2438	11	ISM	ENSG00000172244.9	ENST00000306862.7	2502	13	-19	3561	-19	59	5prime_fragment	FALSE	canonical	2	47	junction_10	16.8110082981361	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTTTCAGAAAACATTG	-17	True	NA	NA	False	AATAAA	-14	NA	43515167	43490269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
transcript_110316.known	chr5	-	1208	3	FSM	ENSG00000172244.9	ENST00000514462.1	1208	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	26.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGACTCTACACTAGATA	19	True	NA	NA	False	NA	NA	NA	43515078	43505549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43506395_43508576_43508667_43514805
transcript_110319.nic	chr5	-	1693	11	NIC	ENSG00000172239.14	novel	1814	11	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_10	360.884593741545	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	1259	False	NA	0	True	AATAAA	-36	NA	43556437	43527092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_110321.known	chr5	-	2780	11	FSM	ENSG00000172239.14	ENST00000306846.8	2780	11	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_10	160.119830127314	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAGTAGCATCTGGT	-15	True	NA	-6	True	AATAAA	-25	NA	43557077	43526266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581
transcript_110322.known	chr5	-	1734	11	FSM	ENSG00000172239.14	ENST00000436644.6	1734	11	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_10	266.042552987299	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGGTTAGATGCTTAT	-31	True	NA	1	True	AATAAA	-37	NA	43557093	43527091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
transcript_110323.known	chr5	-	1814	11	FSM	ENSG00000172239.14	ENST00000338972.8	1814	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_10	366.83238679266	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	1	True	NA	0	True	AATAAA	-36	NA	43557695	43527092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43557339
transcript_11033.known	chr1	+	956	2	FSM	ENSG00000285570.1	ENST00000650347.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGCTCGCTGTATGA	NA	False	NA	NA	False	AAGAAA	-32	NA	156689675	156704757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156689825_156703950
transcript_110337.known	chr5	-	752	5	FSM	ENSG00000172239.14	ENST00000508537.1	752	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	539.912666548952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGTGAGAAGTTTTTCT	1318	False	NA	NA	False	NA	NA	NA	43556378	43538928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_110339.known	chr5	+	6483	22	FSM	ENSG00000112992.18	ENST00000264663.9	6483	22	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	17.3147467066296	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTTTACACATTATAT	30	True	NA	NA	False	AATAAA	-29	NA	43602722	43707405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43602891_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_11034.known	chr1	-	974	4	FSM	ENSG00000143320.9	ENST00000368222.8	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_3	191.362367135118	18614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTGGCTCATTGGG	0	True	NA	34	True	AATAAA	-2	NA	156705583	156699605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376
transcript_110340.known	chr5	+	6421	22	FSM	ENSG00000112992.18	ENST00000344920.9	6421	22	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	12.5703462737578	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTATAAGTTTTTAC	-26	True	NA	NA	False	AATAAA	-20	NA	43603179	43707396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43603295_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_110346.nnic	chr5	-	925	4	NNC	ENSG00000248092.8	novel	4803	3	NA	NA	18	-92	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	7.71722460186015	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGAGTCCTAGTCCAT	-34	True	NA	-1	True	ATTAAA	-19	NA	43603158	43571685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_43571998_43572779_43572912_43583466_43583567_43602777
transcript_110347.known	chr5	-	4803	3	FSM	ENSG00000248092.8	ENST00000513560.7	4803	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAGATATAAAATG	-14	True	NA	91	True	NA	NA	NA	43603138	43571593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43575936_43583466_43583567_43602777
transcript_11035.known	chr1	-	1033	5	FSM	ENSG00000143320.9	ENST00000621784.4	1033	5	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_4	824.539265286984	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAACCTGTCTC	-19	True	NA	22	True	ATTAAA	-8	NA	156705816	156699617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705547_156705708
transcript_110350.known	chr5	-	557	2	FSM	ENSG00000248092.8	ENST00000515466.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTGAAACCCCATCTC	759	False	43603201	NA	False	NA	NA	NA	43603176	43575777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43575936_43602777
transcript_110359.known	chr5	-	692	5	FSM	ENSG00000251141.6	ENST00000505401.1	692	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.89711431702997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGCAAAACATCAAGAGAA	32	True	NA	NA	False	NA	NA	NA	44808726	44777065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44777329_44777908_44777993_44785048_44785182_44786825_44786953_44808641
transcript_110362.known	chr5	-	659	4	FSM	ENSG00000251141.6	ENST00000514597.5	659	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.63299316185545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTATTAACTATCTCA	16	True	NA	NA	False	NA	NA	NA	44808742	44745008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44745405_44745941_44746039_44777036_44777102_44808641
transcript_110365.known	chr5	-	572	3	FSM	ENSG00000251141.6	ENST00000508123.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAAACTCCTCAACCAAC	762	False	NA	NA	False	AGTAAA	-35	NA	44808666	44775693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44776176_44777036_44777102_44808641
transcript_110367.known	chr5	-	468	3	FSM	ENSG00000251141.6	ENST00000505302.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTACTACATACCA	17	True	NA	NA	False	NA	NA	NA	44808741	44745137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44745409_44745941_44746039_44808641
transcript_110370.known	chr5	-	775	3	FSM	ENSG00000251141.6	ENST00000503179.5	775	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTAGAATTTATAGCACC	-1	True	NA	NA	False	AAGAAA	-14	NA	44808759	44776755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44777329_44777908_44777993_44808641
transcript_110371.nnic	chr5	-	413	3	NIC	ENSG00000251141.6	novel	692	5	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	626	False	NA	0	True	ATTAAA	-20	NA	44808802	44777203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_44777329_44786825_44786953_44808641
transcript_110372.known	chr5	-	220	2	FSM	ENSG00000251141.6	ENST00000505637.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	22	True	NA	0	True	ATTAAA	-20	NA	44808736	44777203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44777329_44808641
transcript_110373.known	chr5	-	295	4	FSM	ENSG00000251141.6	ENST00000508945.5	295	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAAACATAAGAAGAGA	-1	True	NA	NA	False	AATACA	-23	NA	44808759	44745996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44746039_44747626_44747697_44777036_44777102_44808641
transcript_110374.known	chr5	+	1648	5	FSM	ENSG00000112996.11	ENST00000507110.6	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	43.5229824345713	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTAATTAAAAGAACCC	-1	True	NA	4	True	AATAAA	-17	NA	44808946	44815514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_44809564_44811008_44811155_44811914_44812021_44813105_44813283_44814912
transcript_110377.known	chr5	-	4738	2	FSM	ENSG00000164588.8	ENST00000634658.1	4738	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACTCTGTAATGATTAT	NA	False	NA	NA	False	AATACA	-3	NA	45696498	45641700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_45645609_45695668
transcript_110378.known	chr5	-	124	2	FSM	ENSG00000164588.8	ENST00000638054.1	124	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATAGTCCCTGACGTG	751	False	NA	NA	False	NA	NA	NA	45695725	45695074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_45695142_45695668
transcript_110381.known	chr5	-	4202	9	FSM	ENSG00000170571.12	ENST00000303221.10	4202	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	26.4988207284777	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTCTTTTACTTT	-16	True	NA	-1	True	AATAAA	-25	NA	50441288	50396191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
transcript_110385.known	chr5	-	1617	9	FSM	ENSG00000170571.12	ENST00000508934.5	1617	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	82.4059122575559	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGTGCTTGCTCTA	1994	False	NA	-40	True	AATATA	-36	NA	50441350	50398676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411222_50428143_50428228_50441039
transcript_110389.known	chr5	+	7475	26	FSM	ENSG00000151883.19	ENST00000281631.10	7475	26	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_13	18.2829319311756	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	3	True	NA	NA	False	AATAAA	-19	NA	50666636	50846519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_11039.nic	chr1	+	1812	8	NIC	ENSG00000143303.12	novel	2271	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	17	junction_6	13.1676784249176	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	-3	True	NA	25	True	ATTAAA	-14	NA	156728475	156736949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734053_156735724_156735910_156736631
transcript_110390.known	chr5	+	3825	26	FSM	ENSG00000151883.19	ENST00000505554.5	3825	26	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.198851452496	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAATGTATA	145	False	NA	-22	True	NA	NA	NA	50667556	50843374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_50667602_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_110402.nic	chr5	+	1093	7	ISM	ENSG00000151883.19	ENST00000514342.6	2384	24	-12	70375	-12	386	5prime_fragment	FALSE	canonical	3	35	junction_1	8.06225774829855	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACTTTGCACAGTACTT	-2	True	NA	NA	False	AAAAAG	-1	NA	50666925	50763647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147
transcript_110404.known	chr5	+	576	6	FSM	ENSG00000151883.19	ENST00000503707.6	576	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	21.4997674406027	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATAAGTATCACTGGTG	6	True	NA	NA	False	NA	NA	NA	50666966	50763242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50761820_50761899_50763147
transcript_110405.known	chr5	+	464	5	FSM	ENSG00000151883.19	ENST00000503046.5	464	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	9.60468635614927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATTATATTTTTTATTT	20	False	NA	NA	False	CATAAA	-33	NA	50666980	50760366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291
transcript_110408.known	chr5	-	225	3	FSM	ENSG00000251573.2	ENST00000513880.2	225	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTTTATTTATTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	50969967	50969216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_50969324_50969504_50969578_50969922
transcript_11041.known	chr1	+	2271	8	FSM	ENSG00000143303.12	ENST00000368216.9	2271	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	12.0220885142681	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTAGGTAGATAAAAG	-10	True	NA	36	True	ATTAAA	-25	NA	156728468	156736960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_110411.known	chr5	-	606	2	FSM	ENSG00000251573.2	ENST00000506534.2	606	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTTTTATTTATTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	50970167	50969216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_50969578_50969922
transcript_110412.nnic	chr5	-	727	3	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGTGTATATATGTGTG	NA	False	NA	NA	False	AATATA	-13	NA	51061142	51015108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_-_51015563_51056693_51056800_51060975
transcript_110413.known	chr5	+	2394	6	FSM	ENSG00000016082.15	ENST00000230658.12	2394	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.70360757656656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGATCCAGGGTCCCT	23	True	NA	NA	False	AATAAA	-26	NA	51383447	51394730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_51383700_51384540_51384731_51387489_51387750_51389645_51389933_51391273_51391442_51393493
transcript_110415.nic	chr5	+	1475	3	ISM	ENSG00000016082.15	ENST00000505475.3	1212	5	3383	-887	3383	-276	3prime_fragment	FALSE	canonical	3	20	junction_2	2.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAACTTTTTTTGTTTGC	3412	False	NA	34	True	AATAAA	-15	NA	51389586	51394454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_51389933_51391273_51391442_51393493
transcript_110427.known	chr5	-	4166	7	FSM	ENSG00000164172.20	ENST00000396954.8	4166	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	87.9974747112413	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	0	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109250
transcript_110429.known	chr5	+	2367	3	FSM	ENSG00000247796.3	ENST00000502171.2	2367	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATATATTGTACTTGTT	-24	True	NA	NA	False	AATAAA	-19	NA	53109841	53115123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53110149_53112239_53113035_53113858
transcript_110432.known	chr5	+	3137	2	FSM	ENSG00000247796.3	ENST00000499459.2	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	33	False	NA	NA	False	AATAAA	-22	NA	53109898	53115126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53110149_53112239
transcript_110434.known	chr5	+	1536	2	FSM	ENSG00000247796.3	ENST00000667672.1	1536	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	15	True	NA	NA	False	AATAAA	-22	NA	53109880	53115126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53110149_53113858
transcript_110435.known	chr5	-	3705	7	FSM	ENSG00000164172.20	ENST00000450852.8	3705	7	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_6	21.3229141222926	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	0	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_110436.known	chr5	-	1251	7	FSM	ENSG00000164172.20	ENST00000510818.6	1251	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	89.9384048483553	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAAAGAGTATTTTCT	15	True	NA	-9	True	AATAAA	-22	NA	53109742	53098070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53098668_53100410_53100488_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_110437.known	chr5	+	2538	6	FSM	ENSG00000134363.12	ENST00000396947.7	2538	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	92.63563029418	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAATTTTAA	-2	True	NA	-15	True	AATAAA	-10	NA	53480625	53487106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485686
transcript_110438.known	chr5	+	2299	6	FSM	ENSG00000134363.12	ENST00000256759.8	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_4	35.4141214771735	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCAATTCCTGATGAT	1	True	NA	13	True	AATAAA	-38	NA	53480628	53487134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485950
transcript_110444.known	chr5	+	705	4	FSM	ENSG00000134363.12	ENST00000504226.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	93.6055553906925	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAGAAAAAAAGAA	656	False	NA	NA	False	NA	NA	NA	53483610	53486090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53483723_53484068_53484294_53484999_53485228_53485950
transcript_110458.known	chr5	+	669	5	FSM	ENSG00000164258.12	ENST00000296684.10	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	991	junction_2	55.3466349473931	14612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	-7	True	NA	25	True	AATAAA	-43	NA	53560638	53683338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550_53658625_53683117
transcript_110459.known	chr5	+	833	6	FSM	ENSG00000164258.12	ENST00000506974.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	480.399167359811	2214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	1	True	NA	25	True	AATAAA	-43	NA	53560646	53683338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53560761_53603451_53603531_53604723_53604896_53646232_53646406_53658550_53658625_53683117
transcript_110460.known	chr5	+	559	4	FSM	ENSG00000164258.12	ENST00000506765.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	485.245184302625	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	29	False	NA	25	True	AATAAA	-43	NA	53560674	53683338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53683117
transcript_110461.known	chr5	-	3328	5	FSM	ENSG00000185305.12	ENST00000504924.6	3328	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	5.09901951359278	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCAGACTAACTCCT	10	True	NA	-30	True	AATAAA	-16	NA	54310573	53883941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53886714_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_110462.known	chr5	-	628	4	FSM	ENSG00000185305.12	ENST00000505630.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	4.32049379893857	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATGTAATTAGGA	7	True	NA	NA	False	NA	NA	NA	54310576	54113132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_54113411_54154579_54154640_54171783_54171929_54310431
transcript_110465.nic	chr5	+	888	3	ISM	ENSG00000113088.6	ENST00000231009.3	1506	5	6079	438	-38	-438	3prime_fragment	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTCTTTTATCACA	5620	False	NA	NA	False	AATAAA	-14	NA	55030334	55034132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_55030585_55031363_55031634_55033764
transcript_110475.known	chr5	+	3422	4	FSM	ENSG00000164294.14	ENST00000506123.5	3422	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	72.7751483833748	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	-9	True	NA	NA	False	AAAAAG	-22	NA	55160167	55167071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160244_55160329_55160397_55160993_55161256_55164054
transcript_110478.known	chr5	+	1036	3	FSM	ENSG00000164294.14	ENST00000515370.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	98	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATATATGTATGCTTG	-7	True	NA	35	True	AATAAA	-45	NA	55160169	55164754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160244_55160993_55161256_55164054
transcript_110480.known	chr5	+	3731	3	FSM	ENSG00000164294.14	ENST00000503787.6	3731	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	9.5	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGAAAGTTGTATT	-6	True	NA	9	True	AATAAA	-18	NA	55160170	55167297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160397_55160993_55161256_55164054
transcript_110488.known	chr5	+	3245	2	FSM	ENSG00000164294.14	ENST00000296734.6	3245	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	-8	True	NA	NA	False	AAAAAG	-22	NA	55160168	55167071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160397_55164054
transcript_110492.known	chr5	-	1361	3	FSM	ENSG00000152669.9	ENST00000282572.5	1361	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAAGTGTCTGTCTGC	5	True	NA	0	True	AATAAA	-20	NA	55233608	55231151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55231861_55232360_55232547_55233142
transcript_110493.nic	chr5	-	2124	2	ISM	ENSG00000152669.9	ENST00000282572.5	1361	3	-167	0	-167	0	intron_retention	FALSE	canonical	2	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAAGTGTCTGTCTGC	-7	True	NA	0	True	AATAAA	-20	NA	55233775	55231151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_55231861_55232360
transcript_110499.known	chr5	-	4450	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	20	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.7700445887361	486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-3	True	NA	-1	True	AATAAA	-17	NA	55307674	55256245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285856_55289263_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_11050.known	chr1	+	1802	7	FSM	ENSG00000143303.12	ENST00000368218.8	1802	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	14.4193157489066	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	NA	False	NA	25	True	ATTAAA	-14	NA	156728441	156736949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156735724_156735910_156736631
transcript_110500.known	chr5	+	3961	27	FSM	ENSG00000039123.16	ENST00000230640.10	3961	27	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_6	51.7542697549663	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAATTAGTTTTTTCA	-9	True	NA	16	True	AATAAA	-14	NA	55307988	55425579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55308148_55322326_55322465_55324131_55324199_55327715_55327779_55328698_55328812_55340009_55340185_55341680_55341772_55343330_55343456_55344521_55344621_55345093_55345197_55347012_55347145_55349572_55349653_55350918_55351030_55353167_55353270_55358572_55358699_55366724_55366876_55378313_55378487_55379126_55379196_55387973_55388103_55397415_55397527_55400232_55400422_55405424_55405589_55410523_55410630_55414181_55414239_55415969_55416133_55422877_55422983_55424719
transcript_110507.nic	chr5	+	472	2	ISM	ENSG00000039123.16	ENST00000504388.5	590	4	-274	2328	-262	-2328	5prime_fragment	FALSE	canonical	3	446	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGAGATGTAGATTTCG	65	False	NA	NA	False	NA	NA	NA	55307726	55322377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_55308148_55322326
transcript_110512.known	chr5	-	1550	6	FSM	ENSG00000067113.17	ENST00000264775.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	322.582454575571	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-6	True	NA	-11	True	ATTAAA	-19	NA	55534969	55424853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55490959_55491115_55534571
transcript_110517.nic	chr5	-	1208	5	NIC	ENSG00000067113.17	novel	1542	6	NA	NA	169	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_4	181.838527270763	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	302	False	NA	-11	True	ATTAAA	-19	NA	55534782	55424853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_110519.nic	chr5	-	1132	5	NIC	ENSG00000067113.17	novel	1542	6	NA	NA	169	-76	combination_of_known_junctions	FALSE	canonical	3	284	junction_4	181.838527270763	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTATGTAATATGCTTTC	302	False	NA	-24	True	ATTAAA	-24	NA	55534782	55424929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55534571
transcript_110526.nic	chr5	-	2804	18	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_15	66.1971470966614	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-11	True	NA	0	True	AATAAA	-29	NA	55712334	55625844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55702738_55702895_55704321_55704435_55711451_55711500_55712216
transcript_110530.nic	chr5	-	2648	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_14	48.448426187029	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-11	True	NA	0	True	AATAAA	-29	NA	55712334	55625844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
transcript_110545.known	chr5	-	2522	16	FSM	ENSG00000177058.12	ENST00000396865.7	2522	16	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	32.5764741288352	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-1	True	NA	-3	True	AATAAA	-26	NA	55712324	55625847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_110555.known	chr5	-	2370	15	FSM	ENSG00000177058.12	ENST00000508124.5	2370	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	56.3679602147843	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCTAACTCCTCT	8	True	NA	-13	True	AATAAA	-16	NA	55712315	55625857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55697845_55697993_55711451_55711500_55712216
transcript_110558.nnic	chr5	-	2340	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_6	50.2900261950009	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-11	True	NA	0	True	AATAAA	-29	NA	55712334	55625844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_110559.nic	chr5	-	2427	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-1	0	combination_of_known_junctions	TRUE	canonical	3	20	junction_5	58.1448314863104	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-11	True	NA	0	True	AATAAA	-29	NA	55712334	55625844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_110567.nnic	chr5	-	2232	14	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	60.5088873124187	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-11	True	NA	0	True	AATAAA	-29	NA	55712334	55625844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_110592.known	chr5	-	290	3	FSM	ENSG00000177058.12	ENST00000507216.1	290	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	80	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCTACAATATGTTTAT	-9	True	NA	NA	False	AATAAA	-25	NA	55712298	55704274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55704435_55711451_55711500_55712216
transcript_110593.known	chr5	-	508	5	FSM	ENSG00000177058.12	ENST00000513275.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	98.4692210794825	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTTTGAGCCATCGGATC	-4	True	NA	NA	False	NA	NA	NA	55712293	55697878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55697993_55702738_55702895_55704321_55704435_55711451_55711500_55712216
transcript_110594.known	chr5	-	2369	14	FSM	ENSG00000177058.12	ENST00000318672.7	2369	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	28.3300496995034	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTCTTTTATTTCTAA	NA	False	NA	-2	True	AATAAA	-27	NA	55697994	55625846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845
transcript_110595.known	chr5	-	562	6	FSM	ENSG00000177058.12	ENST00000502416.5	562	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	101.250975303945	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGCAAATATGAATAGTGA	-6	True	NA	NA	False	NA	NA	NA	55712329	55697958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55697993_55702738_55702895_55704042_55704141_55704321_55704435_55711451_55711500_55712216
transcript_110596.nic	chr5	-	780	7	ISM	ENSG00000134352.20	ENST00000381287.8	8667	14	21420	6569	-3257	0	3prime_fragment	FALSE	canonical	3	17	junction_5	13.4039795085887	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAAAAATTAATACTGA	NA	False	NA	NA	False	AAAAAG	-40	NA	55954894	55941693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_55941820_55942669_55942752_55947492_55947590_55951463_55951605_55951928_55952076_55952249_55952352_55954809
transcript_110597.nnic	chr5	+	1060	2	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAAGAAAGAAAGAA	NA	False	NA	NA	False	GATAAA	-18	NA	56123965	56127197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_56124259_56126430
transcript_110599.nnic	chr5	+	1004	2	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCCAACAAGTGTCCACT	1	True	NA	NA	False	AATAAA	-18	NA	56124100	56127276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_56124259_56126430
transcript_110602.known	chr5	+	553	1	FSM	ENSG00000243592.1	ENST00000467688.1	553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	56136978	56137531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56137000_56137500
transcript_110604.known	chr5	-	438	1	FSM	ENSG00000226221.1	ENST00000450941.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	40	False	NA	NA	False	AATACA	-33	NA	56505072	56504634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_56504600_56505100
transcript_110606.known	chr5	+	7036	20	FSM	ENSG00000095015.6	ENST00000399503.4	7036	20	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_9	8.9278424712321	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTACTTTTATTTATT	-7	True	NA	76	True	AATAAA	-15	NA	56815548	56896152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56816056_56856599_56856751_56859714_56859916_56864733_56864935_56865339_56865457_56865828_56865978_56871909_56872032_56872640_56872723_56872824_56873006_56875031_56875311_56878979_56879102_56880710_56880803_56881082_56881273_56881569_56882867_56883526_56883680_56884663_56884827_56885931_56886064_56887377_56887521_56888225_56888358_56893530
transcript_110610.known	chr5	-	619	4	FSM	ENSG00000237705.1	ENST00000415589.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGGTTTTCTGGCTGT	NA	False	NA	NA	False	AATAAA	-23	NA	56862164	56842015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_56842214_56851989_56852075_56859668_56859914_56862073
transcript_110611.known	chr5	-	5198	13	FSM	ENSG00000155545.20	ENST00000381213.7	5198	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	16.4170896730612	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-5	True	NA	-4	True	AATAAA	-16	NA	56952125	56919602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928859_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
transcript_110617.known	chr5	+	1396	6	FSM	ENSG00000155542.12	ENST00000285947.5	1396	6	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	15.0253119767944	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	-18	True	NA	NA	False	AGTAAA	-29	NA	56909595	56917348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56909744_56911168_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_110636.known	chr5	+	1009	5	FSM	ENSG00000155542.12	ENST00000418299.5	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	18.3762754659371	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	1	True	NA	NA	False	AGTAAA	-29	NA	56909614	56917348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56909744_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_110642.known	chr5	+	786	5	FSM	ENSG00000155542.12	ENST00000463805.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	21.6953335996476	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGGTTTTCTACTCAGC	0	True	NA	NA	False	NA	NA	NA	56910059	56916919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56910395_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_110648.nnic	chr5	+	646	3	NIC	ENSG00000155542.12	novel	1009	5	NA	NA	-3	-166	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCAATTTTTCTTTTG	-24	True	NA	22	True	ATTAAA	-24	NA	56909589	56917182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_56909744_56913010_56913135_56916814
transcript_110649.known	chr5	+	571	2	FSM	ENSG00000155542.12	ENST00000498322.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTTCAGTAACATACC	-21	True	NA	NA	False	GATAAA	-1	NA	56909592	56911588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56909744_56911168
transcript_110650.known	chr5	+	417	2	FSM	ENSG00000155542.12	ENST00000423328.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTCCAGAATCTGT	45	False	NA	NA	False	AATAAA	-16	NA	56910104	56911295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56910395_56911168
transcript_110671.nnic	chr5	+	2892	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-148	0	at_least_one_novel_splicesite	FALSE	canonical	1	350	junction_10	247.008381428379	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173799	57263085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_11069.nic	chr1	-	2743	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	115.566238822398	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-29	True	NA	-25	True	GATAAA	-21	NA	156728459	156721890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_110695.known	chr5	+	3310	11	FSM	ENSG00000062194.16	ENST00000514387.6	3310	11	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_2	315.489524390272	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	-8	True	NA	10	True	AATAAA	-17	NA	57174048	57263587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_57174212_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_110696.known	chr5	-	2786	14	FSM	ENSG00000145632.15	ENST00000274289.8	2786	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	11.2006973578334	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTCCTGTCTTTAG	-2	True	NA	59	True	AATAAA	-20	NA	58460086	58453981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
transcript_11070.known	chr1	-	2985	4	FSM	ENSG00000143319.17	ENST00000368219.2	2985	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	106.615612782035	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	-29	True	NA	-29	True	GATAAA	-17	NA	156728766	156721894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156723463_156724147_156724349_156726905_156727770_156728414
transcript_110702.nic	chr5	+	1191	5	NIC	ENSG00000152932.8	novel	423	2	NA	NA	-161	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	23.6682804614108	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATCTTAAATTTATAAG	NA	False	NA	-33	True	NA	NA	NA	58582059	58851527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_58582415_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_110703.nic	chr5	+	1243	5	NIC	ENSG00000152932.8	novel	423	2	NA	NA	-161	52	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	23.6682804614108	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTGTTATTTATTTG	NA	False	NA	19	True	TATAAA	-16	NA	58582059	58851579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_58582415_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_110705.known	chr5	+	8861	5	FSM	ENSG00000152932.8	ENST00000282878.6	8861	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	19.8557296516648	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGCCTTAGTCTGAT	-11	True	NA	13	True	AATAAA	-25	NA	58583074	58859394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_58583233_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_110711.known	chr5	+	423	2	FSM	ENSG00000152932.8	ENST00000513316.1	423	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGGCTTTGAACTGGCA	8	False	NA	NA	False	AGTAAA	-45	NA	58582220	58617871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_58582415_58617642
transcript_110712.nnic	chr5	-	971	6	NNC	ENSG00000248475.5	novel	641	4	NA	NA	-120113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.99332590941915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGACCTTTGTTTCT	NA	False	NA	-10	True	AATAAA	-18	NA	58937212	58741580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_58742001_58814659_58814746_58815733_58815813_58817043_58817135_58866027_58866130_58937019
transcript_110715.nnic	chr5	-	929	5	NNC	ENSG00000248475.5	novel	641	4	NA	NA	-120173	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1.73205080756888	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGACCTTTGTTTCT	NA	False	NA	-10	True	AATAAA	-18	NA	58937272	58741580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_58742001_58814659_58814746_58815733_58815813_58817043_58817135_58937019
transcript_110717.nnic	chr5	-	766	5	NNC	ENSG00000248475.5	novel	641	4	NA	NA	-120109	-71618	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.866025403784439	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTGCTTTACCTTTA	NA	False	NA	-1	True	AATAAA	-22	NA	58937208	58813198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_58813520_58814659_58814746_58815733_58815813_58817043_58817135_58937019
transcript_110718.nnic	chr5	-	850	4	NNC	ENSG00000248475.5	novel	641	4	NA	NA	-120173	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2.49443825784929	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGACCTTTGTTTCT	NA	False	NA	-10	True	AATAAA	-18	NA	58937272	58741580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_58742001_58814659_58814746_58817043_58817135_58937019
transcript_110719.nnic	chr5	-	715	3	NNC	ENSG00000248475.5	novel	476	2	NA	NA	-120113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGACCTTTGTTTCT	NA	False	NA	-10	True	AATAAA	-18	NA	58937212	58741580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_58742001_58866027_58866130_58937019
transcript_110720.known	chr5	-	641	4	FSM	ENSG00000248475.5	ENST00000509476.1	641	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGACCTTTGTTTCT	NA	False	NA	-10	True	AATAAA	-18	NA	58817099	58741580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_58742001_58814659_58814746_58815733_58815813_58817043
transcript_110721.known	chr5	-	2294	15	FSM	ENSG00000113448.20	ENST00000405755.6	2294	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.78773530958939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGACGTTTGTTGAACAA	13	True	NA	NA	False	NA	NA	NA	59356975	58974562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_58975081_58975656_58975840_58976349_58976473_58977190_58977346_58988492_58988593_58989754_58989920_58990803_58990903_58991831_58992005_58993371_58993466_59038858_59038972_59180594_59180645_59185188_59185263_59193499_59193537_59215776_59215969_59356757
transcript_110723.nic	chr5	-	921	6	NIC	ENSG00000113448.20	novel	1040	6	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1.16619037896906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACGGGAAAAAACAACATAC	-1	True	NA	NA	False	TATAAA	-19	NA	59357028	59157065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_59157363_59180594_59180645_59185188_59185263_59193499_59193537_59215776_59215969_59356757
transcript_110725.nnic	chr5	+	741	4	NNC	ENSG00000247345.2	novel	729	2	NA	NA	-102464	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.35412613473634	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTGGAAATTTTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	58937296	59063510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_58937502_58942561_58942629_59060144_59060188_59063084
transcript_110726.nnic	chr5	+	697	3	NNC	ENSG00000247345.2	novel	729	2	NA	NA	-102487	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCTGGAAATTTTCCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	58937273	59063510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_58937502_59060144_59060188_59063084
transcript_110732.known	chr5	-	2504	11	FSM	ENSG00000035499.13	ENST00000265036.10	2504	11	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_9	45.5407509819502	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGTTTCTTTTTTG	26	False	60700192	-3	True	AATAAA	-23	NA	60700166	60596911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_110738.known	chr5	-	1569	10	FSM	ENSG00000035499.13	ENST00000453022.6	1569	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	165.065493922717	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTGCCTTAGTTTTTA	-1	True	NA	NA	False	CATAAA	-24	NA	60700134	60597628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60597915_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_110743.known	chr5	+	970	2	FSM	ENSG00000287434.1	ENST00000664253.1	970	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGACTTCACTCTCTTG	NA	False	NA	-56	True	AATAAA	-22	NA	60699728	60702010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60700342_60701653
transcript_110745.known	chr5	-	3874	9	FSM	ENSG00000164181.14	ENST00000508821.6	3874	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_8	5.68853012649138	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTGTATATTTTTCAT	7	True	NA	-1	True	AATAAA	-19	NA	60844269	60751790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60799179_60799231_60844159
transcript_110747.known	chr5	-	3827	8	FSM	ENSG00000164181.14	ENST00000425382.5	3827	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	5.19418827505653	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGTGTGTATATTTTTCA	2	True	NA	-2	True	AATAAA	-18	NA	60844274	60751791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60844159
transcript_110751.known	chr5	-	2091	13	FSM	ENSG00000049167.16	ENST00000675042.2	2091	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	55.1323533770225	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCACACGTGATTATCAT	-19	True	NA	-5	True	AATAAA	-30	NA	60945073	60873821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60932106_60932149_60944931
transcript_110754.known	chr5	-	1738	10	FSM	ENSG00000049167.16	ENST00000683052.1	1738	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.6398564544608	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAATGCTGTAATAAAA	413	False	NA	-53	True	NA	NA	NA	60945008	60873869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60944931
transcript_110756.known	chr5	-	2095	13	FSM	ENSG00000049167.16	ENST00000643034.1	2095	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	54.4959223754911	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGTGTCAACCCACAC	-10	True	NA	-16	True	AATAAA	-19	NA	60945064	60873832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924357_60928863_60928960_60944931
transcript_110757.known	chr5	-	9414	12	FSM	ENSG00000049167.16	ENST00000676185.1	9414	12	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_2	25.0862973363864	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCAATAGAACTTTTT	-16	True	NA	NA	False	AATAAA	-30	NA	60945070	60866453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_110758.known	chr5	-	2034	13	FSM	ENSG00000049167.16	ENST00000265038.10	2034	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	55.9501266009887	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTGGCTTAAACATGA	-10	True	NA	-68	True	NA	NA	NA	60945064	60873884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60896458_60896516_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_110759.known	chr5	-	2236	13	FSM	ENSG00000049167.16	ENST00000381118.7	2236	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	54.4959223754911	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTCAACCCACACGT	3	True	NA	-14	True	AATAAA	-21	NA	60945051	60873830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924509_60928863_60928960_60944931
transcript_110760.known	chr5	-	3672	11	FSM	ENSG00000049167.16	ENST00000682217.1	3672	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	47.0371130066461	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTCGTCTCTAAATAAA	-16	True	NA	NA	False	NA	NA	NA	60945070	60871997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_110761.known	chr5	-	2855	10	FSM	ENSG00000049167.16	ENST00000682246.1	2855	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	45.772383716725	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTATCAGCAGGAAAAAAA	-10	True	NA	NA	False	AATAAA	-3	NA	60945064	60891687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60893644_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_110762.known	chr5	-	881	6	FSM	ENSG00000049167.16	ENST00000675229.1	881	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.7216351150314	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	3	True	NA	0	True	ATTAAA	-18	NA	60945051	60903359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_110763.known	chr5	-	1073	5	FSM	ENSG00000049167.16	ENST00000682418.1	1073	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	59.221512138749	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTAGTTTCAGAGCC	-10	True	NA	NA	False	NA	NA	NA	60945064	60909339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60909958_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_110764.known	chr5	-	2165	13	FSM	ENSG00000049167.16	ENST00000675378.1	2165	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	56.4891213715821	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGTGTCAACCCACACG	-16	True	NA	-15	True	AATAAA	-20	NA	60945070	60873831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890272_60890402_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_110765.known	chr5	-	1248	10	FSM	ENSG00000049167.16	ENST00000683199.1	1248	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	17.9009621094634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATACTGTGCAACTT	391	False	NA	NA	False	AATGAA	-3	NA	60945030	60890703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_110767.known	chr5	+	843	6	FSM	ENSG00000164182.12	ENST00000677756.1	843	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	328.663597010682	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTTTAACAAATAAAAGAA	32	True	NA	-3	True	AATGAA	-40	NA	60945182	61152995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945383_61045523_61045605_61045839_61045979_61073124_61073215_61098991_61099033_61152703
transcript_110774.known	chr5	+	2211	4	FSM	ENSG00000164182.12	ENST00000678452.1	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	277.777288888459	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATGTGTCTTTATAGTA	26	True	NA	NA	False	AATAAA	-8	NA	60945176	61154531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945429_61073124_61073215_61098991_61099033_61152703
transcript_110780.known	chr5	+	586	3	FSM	ENSG00000164182.12	ENST00000511107.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	345.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	-8	True	NA	28	True	AATAAA	-16	NA	60945206	61153026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945429_61098991_61099033_61152703
transcript_110781.known	chr5	+	632	4	FSM	ENSG00000164182.12	ENST00000296597.10	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_2	52.9591037184984	5959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	-10	True	NA	28	True	AATAAA	-16	NA	60945204	61153026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945383_61073124_61073215_61098991_61099033_61152703
transcript_110782.known	chr5	+	461	3	FSM	ENSG00000164182.12	ENST00000502658.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	380.5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	120	False	NA	28	True	AATAAA	-16	NA	60945334	61153026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945383_61073124_61073215_61152703
transcript_110784.known	chr5	-	584	4	FSM	ENSG00000188725.8	ENST00000507416.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	237.352527313745	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAATCATTTGGAAAAT	-51	True	NA	NA	False	AAAAAG	-32	NA	61162468	61159921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_61160200_61161087_61161228_61162216_61162360_61162445
transcript_110787.known	chr5	-	2888	3	FSM	ENSG00000188725.8	ENST00000339020.8	2888	3	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_2	0.5	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATAGTATCCATGATAAC	-51	True	NA	1	True	AATAAA	-26	NA	61162468	61157703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_61160200_61161087_61161228_61162216
transcript_110789.nnic	chr5	+	692	2	Genic_Genomic	ENSG00000250461.1	novel	744	1	NA	NA	-54	-67	multi-exon	FALSE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCATAAGAAACACAGTA	1	True	NA	NA	False	AAAAAG	-26	NA	61375057	61375788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_61375420_61375458
transcript_11079.nic	chr1	-	2028	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	-18	-711	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	115.566238822398	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATTAACCTGGTTGG	-29	True	NA	NA	False	NA	NA	NA	156728459	156722605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_110794.known	chr5	+	7541	20	FSM	ENSG00000068796.19	ENST00000676271.1	7541	20	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	80.0684264150811	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	10	True	NA	23	True	AATAAA	-19	NA	62306451	62391025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_110795.known	chr5	+	2539	20	FSM	ENSG00000068796.19	ENST00000401507.7	2539	20	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	54.2672161431047	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTCCTTCACCTGA	5	True	NA	-37	True	NA	NA	NA	62306161	62385676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_110797.known	chr5	-	1581	12	FSM	ENSG00000086189.11	ENST00000681192.1	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	128.052739651409	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-8	True	NA	-18	True	AGTAAA	-17	NA	62403902	62388526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403667
transcript_110799.known	chr5	+	7901	21	FSM	ENSG00000068796.19	ENST00000674632.1	7901	21	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	147.672365390414	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	-7	True	NA	23	True	AATAAA	-19	NA	62306205	62391025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62372437_62372552_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_110809.known	chr5	+	1787	6	FSM	ENSG00000068796.19	ENST00000675085.1	1787	6	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	67.4999259258853	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATTATTTCCTAGAAGAA	-7	True	NA	NA	False	NA	NA	NA	62306205	62354337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274
transcript_110813.known	chr5	+	2866	19	FSM	ENSG00000068796.19	ENST00000674752.1	2866	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	110.301214973777	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAGAAGAGTTTTATCT	NA	False	NA	6	True	AATAAA	-12	NA	62347146	62386377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353256_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_110814.known	chr5	-	2831	12	FSM	ENSG00000086189.11	ENST00000199320.9	2831	12	0	0	0	0	multi-exon	TRUE	canonical	3	420	junction_6	21.066208106039	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAGCTGCAAGAAAAC	-11	True	NA	NA	False	AATAAA	-16	NA	62403905	62387253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_110815.known	chr5	-	2082	12	FSM	ENSG00000086189.11	ENST00000680062.1	2082	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_11	130.897663642662	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTATTGATATTTGGC	9164	False	NA	-13	True	AATAAA	-3	NA	62403624	62387964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403450
transcript_110816.known	chr5	-	1468	11	FSM	ENSG00000086189.11	ENST00000679751.1	1468	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	130.638432323723	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-8	True	NA	-18	True	AGTAAA	-17	NA	62403902	62388526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62403272_62403347_62403693
transcript_110817.known	chr5	-	2784	11	FSM	ENSG00000086189.11	ENST00000680785.1	2784	11	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_5	22.0099977283052	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	8845	False	NA	-18	True	AGTAAA	-17	NA	62403943	62388526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_110818.known	chr5	-	1656	13	FSM	ENSG00000086189.11	ENST00000680960.1	1656	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	171.470600006726	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-11	True	NA	-18	True	AGTAAA	-17	NA	62403905	62388526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62399780_62399879_62402035_62402123_62403272_62403347_62403693
transcript_110819.known	chr5	-	1518	11	FSM	ENSG00000086189.11	ENST00000681672.1	1518	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	140.917848408213	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	8859	False	NA	-18	True	AGTAAA	-17	NA	62403929	62388526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_110820.known	chr5	-	1208	11	FSM	ENSG00000086189.11	ENST00000506390.5	1208	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	141.000319148575	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGTGAGCCTCAT	-4	True	NA	1	True	AATAAA	-23	NA	62403898	62391716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62392007_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_110822.known	chr5	+	4365	30	FSM	ENSG00000086200.17	ENST00000325324.11	4365	30	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	27.1873755412844	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACTGATTTGTCTGA	-10	True	NA	15	True	ATTAAA	-19	NA	62412762	62628582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763_62601849_62627153
transcript_110828.nic	chr5	+	1182	4	ISM	ENSG00000086200.17	ENST00000325324.11	4365	30	-19	177905	-19	-1186	5prime_fragment	FALSE	canonical	3	255	junction_2	2.94392028877595	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGAATGGCTTCAGG	-2	True	NA	NA	False	TTTAAA	-12	NA	62412743	62450677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926
transcript_110829.nic	chr5	+	957	3	ISM	ENSG00000086200.17	ENST00000325324.11	4365	30	-19	184973	-19	574	5prime_fragment	FALSE	canonical	3	255	junction_2	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATATAAGGTTAGGAT	-2	True	NA	NA	False	AAAAAG	-4	NA	62412743	62443609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_62412930_62437273_62437418_62442982
transcript_110830.known	chr5	+	4945	8	FSM	ENSG00000164197.12	ENST00000389100.9	4945	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.11677488989592	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAATATGATACTTGT	-13	True	NA	NA	False	AATAAA	-20	NA	64165842	64372869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64165954_64200807_64200943_64212064_64212161_64213557_64214518_64217360_64217397_64325185_64325412_64330280_64330407_64369614
transcript_110832.known	chr5	+	1727	5	FSM	ENSG00000164197.12	ENST00000296615.10	1727	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.87082869338697	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATTAAAAAAA	-12	True	NA	NA	False	NA	NA	NA	64165843	64217786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64165954_64200807_64200943_64212064_64212161_64213557_64214518_64217360
transcript_110859.known	chr5	-	6878	5	FSM	ENSG00000153006.16	ENST00000513458.9	6878	5	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	74.9645749671136	3217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGTGTCTTGCTTTG	0	True	NA	-4	True	AATAAA	-42	NA	64768691	64718147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_64724574_64728106_64728180_64741056_64741201_64754314_64754363_64768504
transcript_110870.known	chr5	+	612	4	FSM	ENSG00000145642.12	ENST00000506473.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	258.470286278498	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGATATAATTCAAGAA	25	False	NA	-5	True	AATGAA	-14	NA	64690531	64717963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64690815_64694086_64694183_64695506_64695665_64717888
transcript_11088.known	chr1	-	3303	3	FSM	ENSG00000143319.17	ENST00000313146.10	3303	3	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	5	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-5	True	NA	-25	True	GATAAA	-21	NA	156728435	156721890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156723463_156724147_156724349_156726905
transcript_110885.known	chr5	-	816	4	FSM	ENSG00000153006.16	ENST00000495198.6	816	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	84.0991478355558	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGGCTGAGGTGAGAGG	30	True	NA	NA	False	AAGAAA	-44	NA	64768619	64727670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_64728180_64741056_64741201_64754314_64754363_64768504
transcript_110892.known	chr5	+	637	3	FSM	ENSG00000145642.12	ENST00000512767.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	285	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATCCACATTGCTTAT	734	False	NA	31	True	AAGAAA	-16	NA	64691240	64717999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64691609_64695506_64695665_64717888
transcript_110893.known	chr5	+	532	3	FSM	ENSG00000145642.12	ENST00000513930.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	286	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAACGGTTTGTAATA	812	False	NA	11	True	AATAAA	-13	NA	64691318	64718082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64691499_64695506_64695665_64717888
transcript_110895.nic	chr5	-	410	3	ISM	ENSG00000153006.16	ENST00000495198.6	816	4	-103	13386	-31	0	5prime_fragment	FALSE	canonical	3	458	junction_2	97	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	NA	False	NA	NA	False	AATAAA	-23	NA	64768722	64741056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_64741201_64754314_64754363_64768504
transcript_110901.known	chr5	+	772	3	FSM	ENSG00000145642.12	ENST00000389074.6	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	95.5	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTCCTTTGTATA	-4	True	NA	16	True	ATTAAA	-16	NA	64690502	64718190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64690815_64695506_64695665_64717888
transcript_110902.known	chr5	-	392	4	FSM	ENSG00000153006.16	ENST00000510616.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	286.933596654154	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	22	True	NA	NA	False	AATAAA	-23	NA	64768627	64741056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_64741201_64754314_64754363_64765044_64765122_64768504
transcript_110905.known	chr5	+	2065	14	FSM	ENSG00000153015.17	ENST00000381070.8	2065	14	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_11	57.743669444769	2858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAATATGGATGGGG	-14	True	NA	NA	False	AATAAA	-20	NA	64768929	65018750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442_64885547_64971702_64971813_64977134_64977239_65018158
transcript_110906.known	chr5	+	2103	11	FSM	ENSG00000153015.17	ENST00000508024.2	3867	11	28	1736	0	22	multi-exon	FALSE	canonical	2	3	junction_10	202.354169712413	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTCTCCTCTGGATCT	2	True	NA	4	True	AATAAA	-16	NA	64768945	64808562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64807598
transcript_110920.known	chr5	-	1731	11	FSM	ENSG00000123219.13	ENST00000396679.6	1731	11	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_9	59.9433065487716	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-22	True	NA	-1	True	AATAAA	-21	NA	65563168	65517765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_110921.known	chr5	-	1697	11	FSM	ENSG00000123219.13	ENST00000514814.5	1697	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_9	110.586843702133	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-22	True	NA	-1	True	AATAAA	-21	NA	65563168	65517765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561496_65561565_65563097
transcript_110922.known	chr5	-	1586	11	FSM	ENSG00000123219.13	ENST00000508421.5	1586	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	123.564112913095	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATCCTCTGTGAAT	21	True	NA	-55	True	NA	NA	NA	65563125	65517819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462_65561565_65563097
transcript_110923.known	chr5	-	1124	5	FSM	ENSG00000123219.13	ENST00000510354.1	1124	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	186.355842409086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTGCTGACCAGTTGT	1582	False	NA	1	True	AATAAA	-18	NA	65561564	65550466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65551243_65551563_65551637_65552492_65552550_65554796_65554947_65561496
transcript_110924.known	chr5	-	634	2	FSM	ENSG00000123219.13	ENST00000504508.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATTTAAACCTGTAT	10	True	NA	NA	False	TTTAAA	-6	NA	65563136	65560969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65561565_65563097
transcript_110925.known	chr5	-	1576	9	FSM	ENSG00000123219.13	ENST00000242872.7	1576	9	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_8	23.0054341406547	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAGTGATGTGGGAT	8181	False	NA	-2	True	AATAAA	-20	NA	65554965	65517766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796
transcript_110927.known	chr5	+	2019	12	FSM	ENSG00000113593.12	ENST00000510930.5	2019	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	160.957927873884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATACAATATTAA	7	True	NA	-56	True	AGTAAA	-26	NA	65563295	65587422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65563507_65563802_65563840_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_11093.known	chr1	-	872	2	FSM	ENSG00000143319.17	ENST00000496538.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGGGAAAAAGTCCTA	1447	False	NA	NA	False	NA	NA	NA	156727386	156723957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156724349_156726905
transcript_110932.known	chr5	+	2109	11	FSM	ENSG00000113593.12	ENST00000261308.10	2109	11	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_5	68.1119666431678	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	7	True	NA	23	True	ATTAAA	-20	NA	65563295	65587549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65563507_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_11094.known	chr1	-	594	2	FSM	ENSG00000143319.17	ENST00000469074.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAGCTCCCAGAAGAA	-11	True	NA	NA	False	NA	NA	NA	156728441	156727241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156727809_156728414
transcript_110941.nnic	chr5	+	1352	7	NIC	ENSG00000113593.12	novel	2109	11	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	173.706089575339	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	-9	True	NA	23	True	ATTAAA	-20	NA	65563279	65587549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_65563507_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_110942.known	chr5	+	838	2	FSM	ENSG00000113593.12	ENST00000508982.1	838	2	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATGATACTCAAAAAATG	NA	False	NA	NA	False	TATAAA	-33	NA	65563235	65568079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65563507_65567512
transcript_110943.known	chr5	+	8652	13	FSM	ENSG00000123213.23	ENST00000380985.10	8652	13	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_12	77.6292828483914	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	-21	True	NA	NA	False	AATAAA	-20	NA	65722204	65829283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_110945.known	chr5	+	2085	10	FSM	ENSG00000123213.23	ENST00000506799.5	2085	10	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_9	75.9967510676575	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTCTTCTGGTAAATAT	NA	False	NA	8	True	GATAAA	-9	NA	65777416	65823325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_110946.known	chr5	-	1855	13	FSM	ENSG00000113595.15	ENST00000381018.7	1855	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	26.6253586308658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAACTGTTTACTAGTTA	21	True	NA	-4	True	AATAAA	-26	NA	65624296	65590175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65590303_65591447_65591503_65591842_65591949_65594520_65594646_65596420_65596532_65597050_65597181_65604910_65605046_65609242_65609459_65610860_65611044_65611602_65611882_65614097_65614220_65618092_65618256_65624193
transcript_110947.known	chr5	+	1437	13	FSM	ENSG00000113597.18	ENST00000438419.6	1437	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	47.1342644886805	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTTTATCTTGTAA	2	True	NA	9	True	ATTAAA	-16	NA	65625033	65664764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_110949.known	chr5	+	2910	13	FSM	ENSG00000113597.18	ENST00000399438.8	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	47.7237420531496	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCTATATTTTAATTA	-5	True	NA	115	True	AGTAAA	-18	NA	65625026	65666233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_110954.known	chr5	+	1410	12	FSM	ENSG00000113597.18	ENST00000505553.5	1410	12	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	26.2763445134923	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTTTATCTTGTAATT	13	True	NA	11	True	ATTAAA	-18	NA	65625044	65664766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_110956.known	chr5	+	2715	12	FSM	ENSG00000113597.18	ENST00000231526.8	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	27.7074444750656	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTCTGTCTTTGTTTC	8	True	NA	7	True	AATAAA	-18	NA	65625039	65666069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_110961.known	chr5	-	3863	11	FSM	ENSG00000113595.15	ENST00000231524.14	3863	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	10.6512910015641	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGAAGTCCCATCAT	-16	True	NA	-21	True	AATAAA	-13	NA	65624333	65589689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65591949_65594520_65594646_65596420_65596532_65597050_65597181_65604910_65605046_65609242_65609459_65610860_65611044_65611602_65611882_65614097_65614220_65618092_65618256_65624193
transcript_110966.known	chr5	-	5448	11	FSM	ENSG00000197860.10	ENST00000381007.9	5448	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	8.12403840463596	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTATTTGATTTAATG	8	True	NA	0	True	AATAAA	-23	NA	65722109	65665927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65670358_65671914_65671999_65672243_65672282_65680493_65680557_65680655_65680795_65685367_65685473_65704278_65704379_65708488_65708559_65712960_65713065_65720707_65720830_65721916
transcript_110975.known	chr5	+	1541	2	FSM	ENSG00000253251.3	ENST00000510585.3	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTTAGTGCTAATTAT	-5	True	NA	NA	False	AATACA	-17	NA	65625026	65630928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65629467
transcript_110976.known	chr5	+	641	3	FSM	ENSG00000112851.15	ENST00000509946.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	13.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACCACTGTACAGAATA	4367	False	NA	NA	False	AATGAA	-26	NA	66076109	66078689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_66076409_66076874_66076950_66078422
transcript_110978.known	chr5	+	6699	12	FSM	ENSG00000153914.16	ENST00000334121.11	6699	12	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	20.5663610444719	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGTTGAGTAGTAATT	-28	True	NA	19	True	AATAAA	-20	NA	66144299	66183615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
transcript_110987.nic	chr5	+	1792	10	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	8574	-53	-3816	5prime_fragment	FALSE	canonical	3	177	junction_5	20.2362588647088	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTGGGAGCTTGTGCT	NA	False	NA	NA	False	CATAAA	-34	NA	66144164	66175041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945
transcript_110991.nic	chr5	+	1398	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	12966	-53	0	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAGAGAGAGAGGGAA	NA	False	NA	39	True	NA	NA	NA	66144164	66170649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_110992.nic	chr5	+	1564	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	12800	-53	0	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAGGACAAAGAAAAGG	NA	False	NA	-13	True	AAAAAG	-35	NA	66144164	66170815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_110993.nic	chr5	+	1627	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-135	12737	-53	63	5prime_fragment	FALSE	canonical	3	177	junction_5	21.1187120819429	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGATAAAAAATCCAGAA	NA	False	NA	50	True	AAAAAG	-32	NA	66144164	66170878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_111000.known	chr5	-	777	2	FSM	ENSG00000229666.2	ENST00000451496.2	904	2	127	0	127	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAACCAGAATGAATTA	7369	False	NA	NA	False	AATAAA	-16	NA	67003953	67001382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_67002050_67003843
transcript_111003.nnic	chr5	-	1427	3	Fusion	ENSG00000249736.1_ENSG00000250421.5	novel	641	3	NA	NA	-26	-141	intron_retention	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTGGCCTAAACAGGG	NA	False	NA	NA	False	NA	NA	NA	67818348	67632406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_67633336_67634306_67634396_67817939
transcript_111007.nnic	chr5	-	613	2	NNC	ENSG00000250421.5	novel	589	4	NA	NA	-70	-24478	intron_retention	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGCCAGTGACAGACCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	67818392	67723928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_67724089_67817939
transcript_111008.known	chr5	-	676	1	FSM	ENSG00000213864.3	ENST00000519625.1	676	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATTATGGC	NA	False	NA	NA	False	NA	NA	NA	68159893	68159217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_68159200_68159900
transcript_111010.known	chr5	+	1317	4	FSM	ENSG00000145740.20	ENST00000380860.8	1317	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	75.4895136205464	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTATTTCTTCA	-47	True	NA	14	True	AATAAA	-16	NA	69093990	69104740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69103961
transcript_111015.known	chr5	+	750	5	FSM	ENSG00000134057.15	ENST00000503507.1	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2199.78527361195	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGCAGTCAGACCAAAAT	43	False	NA	-14	True	NA	NA	NA	69167265	69174255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69167486_69167907_69168079_69168172_69168344_69171269_69171453_69174250
transcript_111016.known	chr5	+	2029	9	FSM	ENSG00000134057.15	ENST00000256442.10	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	5011	junction_3	250.308278678513	7951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATCTTTTTTAAAAAGTT	0	True	NA	17	True	AATAAA	-20	NA	69167149	69178245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238_69177350_69177523
transcript_111017.known	chr5	+	1331	8	FSM	ENSG00000134057.15	ENST00000506572.5	1331	8	0	0	0	0	multi-exon	FALSE	canonical	3	5011	junction_3	138.514421263489	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTGGCATTGTAAGATG	-15	True	NA	NA	False	NA	NA	NA	69167134	69177358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238
transcript_111018.known	chr5	+	767	5	FSM	ENSG00000134057.15	ENST00000507798.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	2276.02629323565	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCATTTACTTTTAAT	6296	False	NA	-11	True	AATAAA	-31	NA	69174256	69177700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69174410_69174876_69175114_69175396_69175538_69177290_69177350_69177523
transcript_111020.known	chr5	+	1354	9	FSM	ENSG00000153044.10	ENST00000283006.7	1354	9	0	0	0	0	multi-exon	TRUE	canonical	3	643	junction_7	93.2690161575644	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTATTTTTTTTTA	12	True	NA	14	True	AATAAA	-15	NA	69189582	69210357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_111028.known	chr5	+	1315	4	FSM	ENSG00000134056.12	ENST00000256441.5	1315	4	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_1	80.8991141278238	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATATGCTTT	0	True	NA	22	True	AATAAA	-20	NA	69217759	69230158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69217872_69226337_69226402_69228199_69228388_69229207
transcript_111032.known	chr5	+	1200	4	FSM	ENSG00000134056.12	ENST00000602380.1	1200	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	469.453819761741	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCATAGGAATAAAGATT	15	True	NA	NA	False	AAAAAG	-33	NA	69217831	69229875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69218112_69226337_69226402_69228199_69228388_69229207
transcript_11104.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000361531.6	883	6	0	0	0	0	multi-exon	FALSE	canonical	2	139	junction_5	74.666190474672	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	6	True	NA	-11	True	AATAAA	-17	NA	156741088	156737302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
transcript_111040.known	chr5	+	298	3	FSM	ENSG00000134056.12	ENST00000507022.1	298	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	524.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTGTTTGTCATCAG	26	True	NA	-52	True	NA	NA	NA	69217785	69229231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69217872_69228199_69228388_69229207
transcript_111047.known	chr5	+	1426	12	FSM	ENSG00000134058.12	ENST00000256443.8	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	42.187499617386	2709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATATAGTATCACAAATC	-5	True	NA	18	True	AATAAA	-30	NA	69234885	69277430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_111048.known	chr5	+	809	9	FSM	ENSG00000134058.12	ENST00000515391.5	809	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	195.096770860002	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTTTATGCATTTTC	-12	True	NA	NA	False	NA	NA	NA	69234878	69269293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254668_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206
transcript_111049.known	chr5	+	1455	11	FSM	ENSG00000134058.12	ENST00000502604.5	1455	11	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_3	40.6311456889909	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAAAAGTTCAATACTC	172	False	NA	52	True	AATAAA	-36	NA	69235116	69277338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_11105.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000368211.8	883	6	0	0	0	0	multi-exon	FALSE	canonical	2	123	junction_5	79.5547610140336	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGCTGCT	2	True	NA	-13	True	AATAAA	-15	NA	156741131	156737304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741052
transcript_111050.known	chr5	+	1164	11	FSM	ENSG00000134058.12	ENST00000514676.5	1164	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	184.569878365892	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTGGTTTTTCTGA	21	False	NA	19	True	AATAAA	-3	NA	69234911	69277305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_111053.known	chr5	+	3057	18	FSM	ENSG00000152942.19	ENST00000616683.4	3057	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	48.2435430536231	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	12	False	NA	11	True	ATTAAA	-12	NA	69370059	69414799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69370285_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_111058.known	chr5	+	2789	17	FSM	ENSG00000152942.19	ENST00000345306.10	2789	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	58.2346747543935	1939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	14	True	NA	13	True	ATTAAA	-14	NA	69369841	69414801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69369934_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_11106.known	chr1	-	990	6	FSM	ENSG00000143314.12	ENST00000434558.5	990	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	118.988066628549	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAGACACATCAGTGGA	9991	False	NA	NA	False	NA	NA	NA	156741590	156737529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741179
transcript_111092.known	chr5	-	1183	5	FSM	ENSG00000085231.14	ENST00000380818.7	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	373.43699267748	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTATTCCTTTTTTCTT	NA	False	NA	-6	True	AATAAA	-17	NA	69370013	69351725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369656
transcript_1111.known	chr1	-	524	5	FSM	ENSG00000116251.11	ENST00000471204.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2938.76159078956	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAAGACGAGGATTAA	149	False	NA	NA	False	NA	NA	NA	6209244	6186691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6208680_6208740_6209134
transcript_111121.known	chr5	-	1057	3	FSM	ENSG00000273841.6	ENST00000508954.4	1705	3	0	648	0	-489	multi-exon	FALSE	canonical	3	53	junction_2	660	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCCATTGATCAAGCC	528	False	NA	NA	False	AAGAAA	-8	NA	69369465	69365431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69368824
transcript_111124.known	chr5	-	761	3	FSM	ENSG00000273841.6	ENST00000509462.6	1057	3	0	296	0	-296	multi-exon	FALSE	canonical	3	13	junction_2	680	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGACCATGTCTGTTTCA	677	False	NA	NA	False	NA	NA	NA	69369316	69365238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69369164
transcript_111125.known	chr5	-	582	3	FSM	ENSG00000273841.6	ENST00000512152.6	996	3	0	414	0	-414	multi-exon	FALSE	canonical	3	31	junction_2	671	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTGAAATCTTTACAGAA	34	True	NA	NA	False	NA	NA	NA	69369477	69365356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69369386
transcript_111126.known	chr5	-	1461	3	FSM	ENSG00000273841.6	ENST00000328663.8	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	657.5	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	NA	False	NA	-17	True	AATAAA	-16	NA	69370013	69364743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69369656
transcript_111127.known	chr5	-	1163	3	FSM	ENSG00000273841.6	ENST00000217893.10	1163	3	0	0	0	0	multi-exon	FALSE	canonical	3	1373	junction_1	204	7572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGTGCTTTGGCAGTT	-9	True	NA	-16	True	AATAAA	-17	NA	69369520	69364742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69369462
transcript_111128.known	chr5	-	1626	5	FSM	ENSG00000085231.14	ENST00000380822.9	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_1	380.153258568173	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTGTGTCCAGT	-9	True	NA	NA	False	TATAAA	-16	NA	69369520	69350983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369462
transcript_111129.known	chr5	-	587	4	FSM	ENSG00000085231.14	ENST00000512561.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_3	423.529088598279	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTTTCTTTTTCTC	-9	True	NA	10	True	ATTAAA	-42	NA	69369520	69351929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69369462
transcript_111130.known	chr5	+	3054	19	FSM	ENSG00000152942.19	ENST00000354868.10	3054	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	70.9024934698838	1949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	-10	True	NA	13	True	ATTAAA	-14	NA	69369817	69414801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69369934_69371034_69371172_69371453_69371558_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_111131.known	chr5	+	2943	18	FSM	ENSG00000152942.19	ENST00000354312.7	2943	18	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	29.2714299103501	2075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	-3	True	NA	13	True	ATTAAA	-14	NA	69369824	69414801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69369934_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_111132.known	chr5	+	3233	18	FSM	ENSG00000152942.19	ENST00000509734.5	3233	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.8962921806327	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	-22	True	NA	13	True	ATTAAA	-14	NA	69369805	69414801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69370285_69371034_69371172_69371453_69371558_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_111134.known	chr5	+	4423	7	FSM	ENSG00000152939.17	ENST00000325631.10	4423	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	44.9175169987538	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGATGCTCAGGTGAC	-2	True	NA	12	True	AATAAA	-25	NA	69415115	69444330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69415171_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_111135.known	chr5	+	3353	7	FSM	ENSG00000152939.17	ENST00000645446.1	3353	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	63.2639971337042	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGTGAGACAGAGT	-2	True	NA	NA	False	NA	NA	NA	69415115	69442836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69415171_69418946_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_111137.known	chr5	+	1908	6	FSM	ENSG00000152939.17	ENST00000512803.5	1908	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	23.2155120555201	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAGTAAAACAGTTT	119	False	NA	NA	False	AAGAAA	-6	NA	69415381	69440496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449
transcript_111140.known	chr5	+	6438	9	FSM	ENSG00000197822.12	ENST00000355237.6	6438	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	144.604417290759	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	117	False	NA	9	True	NA	NA	NA	69492291	69558104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69492660_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_111144.known	chr5	+	6181	9	FSM	ENSG00000197822.12	ENST00000396442.7	6181	9	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_3	34.0640481299566	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	-9	True	NA	9	True	NA	NA	NA	69492789	69558104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_111146.known	chr5	+	3168	8	FSM	ENSG00000197822.12	ENST00000680784.1	3168	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	156.345770649545	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTTTTTTTTTT	-9	True	NA	NA	False	NA	NA	NA	69492789	69555253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_111153.nic	chr5	+	1737	17	NIC	ENSG00000183474.16	novel	4555	17	NA	NA	-39	279	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	132.725515632828	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	69560151	69592525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_69560243_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_111157.known	chr5	+	4555	17	FSM	ENSG00000183474.16	ENST00000380729.8	4555	17	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	132.188785454743	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTAT	NA	False	NA	NA	False	AATAAA	-24	NA	69560190	69595221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69560404_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_111163.nic	chr5	+	1688	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-88	279	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	117.990319753595	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	69560102	69592525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_111164.nic	chr5	+	2014	16	NIC	ENSG00000183474.16	novel	2952	16	NA	NA	-26	53	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	117.990319753595	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGAAATTAATACATAT	NA	False	NA	NA	False	NA	NA	NA	69560164	69592913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_111168.known	chr5	+	2952	16	FSM	ENSG00000183474.16	ENST00000510979.5	2952	16	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	111.356604354359	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAACATACAAAAAAT	28	False	NA	NA	False	NA	NA	NA	69560241	69593767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_111180.known	chr5	+	1956	15	FSM	ENSG00000183474.16	ENST00000446221.6	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	115.731325905817	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	80	False	NA	NA	False	NA	NA	NA	69560293	69592860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_111188.known	chr5	+	832	8	FSM	ENSG00000183474.16	ENST00000512736.5	832	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	152.116496710346	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAATTGTAAGTTGGTT	-6	True	NA	NA	False	ATTAAA	-18	NA	69560207	69572844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444
transcript_1112.known	chr1	-	806	5	FSM	ENSG00000116251.11	ENST00000465335.1	806	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	2527.72011900052	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGGAGGGAAGTGTGTG	4	True	NA	NA	False	NA	NA	NA	6209389	6192929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6193055_6197651_6197757_6200488_6200751_6208680_6208740_6209134
transcript_111200.known	chr5	+	412	2	FSM	ENSG00000183474.16	ENST00000502599.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAACAAAGGA	4919	False	NA	NA	False	ACTAAA	-34	NA	69565132	69566486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69565189_69566130
transcript_111201.nnic	chr5	-	2040	7	NNC	ENSG00000253203.6	novel	1296	4	NA	NA	-31308	14736	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	37.3571352696584	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTAAAAACATAGAATTA	326	False	NA	NA	False	NA	NA	NA	69710567	69624722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_69625901_69640191_69640367_69642204_69642290_69645881_69646070_69679144_69679301_69680765_69680800_69710343
transcript_111204.nnic	chr5	-	1551	5	NNC	ENSG00000253203.6	novel	1296	4	NA	NA	-31298	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	46.5617869072913	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAATTAAAAAT	336	False	NA	NA	False	NA	NA	NA	69710557	69639458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_69640367_69642204_69642290_69645881_69646070_69679144_69679301_69710343
transcript_111209.nnic	chr5	+	1363	10	NNC	ENSG00000198237.8	novel	633	5	NA	NA	-30581	57753	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	30.2524358778464	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACTCAAAAGGCAGAA	312	False	NA	NA	False	NA	NA	NA	69844689	69978620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_69844914_69873663_69873698_69875163_69875320_69910374_69910563_69914157_69914243_69916080_69916256_69920731_69920868_69921151_69921245_69975737_69975853_69978463
transcript_111215.nnic	chr5	+	1270	9	NNC	ENSG00000198237.8	novel	633	5	NA	NA	-30581	57753	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	30.4915459594951	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACTCAAAAGGCAGAA	312	False	NA	NA	False	NA	NA	NA	69844689	69978620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_69844914_69873663_69873698_69875163_69875320_69910374_69910563_69914157_69914243_69916080_69916256_69920731_69920868_69975737_69975853_69978463
transcript_111218.nnic	chr5	+	1784	8	NNC	ENSG00000198237.8	novel	633	5	NA	NA	-30581	1070	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_6	25.2796602922151	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAAAGGGT	312	False	NA	NA	False	NA	NA	NA	69844689	69921937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_69844914_69873663_69873698_69875163_69875320_69910374_69910563_69914157_69914243_69916080_69916256_69920731_69920868_69921151
transcript_11122.known	chr1	-	560	3	FSM	ENSG00000143314.12	ENST00000478899.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	2	193	junction_2	74.5	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	8901	False	NA	-11	True	AATAAA	-17	NA	156738227	156737302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156737535_156737645_156737777_156738030
transcript_111220.nnic	chr5	+	1082	8	NNC	ENSG00000198237.8	novel	633	5	NA	NA	-30581	57753	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_6	34.1921341951088	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACTCAAAAGGCAGAA	312	False	NA	NA	False	NA	NA	NA	69844689	69978620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_69844914_69873663_69873698_69875163_69875320_69914157_69914243_69916080_69916256_69920731_69920868_69975737_69975853_69978463
transcript_111236.known	chr5	+	433	3	FSM	ENSG00000205572.10	ENST00000514285.1	433	3	0	0	0	0	multi-exon	TRUE	canonical	3	302	junction_1	865.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTAAAAACTATTTTAA	275	False	NA	NA	False	NA	NA	NA	70025586	70032493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70025732_70026406_70026516_70032314
transcript_111245.known	chr5	+	703	3	FSM	ENSG00000205572.10	ENST00000380751.9	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	67	7234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70025246	70032696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70025459_70026406_70026516_70032314
transcript_111246.known	chr5	+	569	3	FSM	ENSG00000205572.10	ENST00000503931.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	946.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATCAGTGACCCTGCAA	44	False	NA	NA	False	AGTAAA	-13	NA	70025355	70030122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70025459_70026406_70026516_70029765
transcript_11125.known	chr1	-	2171	6	FSM	ENSG00000143321.19	ENST00000368209.9	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	649.364489327835	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	-1	True	NA	-7	True	AATAAA	-15	NA	156752233	156742109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752037
transcript_11126.known	chr1	-	960	6	FSM	ENSG00000143321.19	ENST00000368206.5	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	635.434213746789	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTCCTCTTCTAC	-20	True	NA	NA	False	NA	NA	NA	156752448	156743344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752228
transcript_111260.known	chr5	+	1440	8	FSM	ENSG00000205571.14	ENST00000626847.2	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_7	388.810535676518	8144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049653	70077592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70077018
transcript_111261.known	chr5	+	1482	9	FSM	ENSG00000205571.14	ENST00000380743.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_7	450.583770652029	7952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	-1	True	NA	NA	False	AATAAA	-25	NA	70049668	70077595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520_70076575_70077018
transcript_111262.known	chr5	+	1388	8	FSM	ENSG00000205571.14	ENST00000380742.8	1388	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	613.854898762479	7103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	-6	True	NA	NA	False	AATAAA	-22	NA	70049663	70077592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520_70076575_70077018
transcript_111263.known	chr5	+	900	8	FSM	ENSG00000205571.14	ENST00000380741.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_7	393.274064484195	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	16	False	NA	NA	False	AAAAAG	-45	NA	70049685	70076586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520
transcript_111264.known	chr5	+	1550	9	FSM	ENSG00000205571.14	ENST00000506734.5	1550	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	633.371533935651	7058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCTGTGATTGTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	70049656	70077596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071281_70071391_70077018
transcript_111265.known	chr5	+	761	6	FSM	ENSG00000205571.14	ENST00000503678.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	1239	junction_4	169.378392954946	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCACTCAGCATCTTTT	NA	False	NA	NA	False	NA	NA	NA	70063410	70070755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640
transcript_111279.nnic	chr5	-	1554	11	Fusion	ENSG00000253816.3_ENSG00000254701.3	novel	497	4	NA	NA	-31393	57691	multi-exon	FALSE	canonical	2	6	junction_5	47.5441899710154	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACTCAAAAGGCAGAA	302	False	NA	NA	False	NA	NA	NA	70290323	70139563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_70139721_70142330_70142446_70197254_70197391_70201867_70202043_70203880_70203966_70219917_70220093_70221930_70222016_70225607_70225796_70258881_70259038_70260503_70260538_70290075
transcript_11128.known	chr1	-	2309	6	FSM	ENSG00000143321.19	ENST00000357325.10	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	1541	junction_4	65.6731299695697	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGATTCTGACTGATTC	3	True	NA	-6	True	AATAAA	-16	NA	156751675	156742108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156751342
transcript_111288.nnic	chr5	-	1541	5	NNC	ENSG00000253816.3	novel	497	4	NA	NA	-31337	745	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	56.3754157412608	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTAAGTTCTTTAG	358	False	NA	NA	False	AAAAAG	-5	NA	70290267	70219172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_70220093_70221930_70222016_70225607_70225796_70258881_70259038_70290075
transcript_11129.known	chr1	+	2068	7	FSM	ENSG00000143294.15	ENST00000271526.9	2068	7	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_1	147.231582511664	1196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	-3	True	NA	17	True	AATAAA	-18	NA	156767534	156800815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156768240_156782281_156782330_156786607_156787175_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_11130.known	chr1	-	1599	9	FSM	ENSG00000027869.12	ENST00000368198.7	1599	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	19.2613602842582	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	15	False	NA	-8	True	AATAAA	-30	NA	156816834	156806242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847_156814017_156814204_156814295_156815036_156815222_156816005_156816064_156816674
transcript_111303.nic	chr5	+	1729	16	NIC	ENSG00000226259.10	novel	1954	15	NA	NA	16	154	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	108.630996190467	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	7	True	NA	NA	False	ATTAAA	-14	NA	70415367	70447680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_70415551_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_111314.known	chr5	+	1432	16	FSM	ENSG00000226259.10	ENST00000508065.7	1432	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	110.857666501791	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGAAATTCAGTAGTAC	NA	False	NA	NA	False	ATTAAA	-26	NA	70415351	70447526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70415390_70420248_70420338_70421279_70421358_70421734_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_111315.known	chr5	+	1055	9	FSM	ENSG00000226259.10	ENST00000507549.7	1055	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	116.444662286427	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAAGTTGGTTGTACCTT	35	False	NA	NA	False	ATTAAA	-25	NA	70415395	70427991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70415551_70417821_70417920_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584
transcript_111316.known	chr5	+	1954	15	FSM	ENSG00000226259.10	ENST00000513202.5	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	106.164701655263	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	82	False	NA	NA	False	NA	NA	NA	70415442	70448015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70415551_70420248_70420338_70421279_70421358_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_111317.nnic	chr5	-	1494	7	Fusion	ENSG00000196302.5_ENSG00000253333.1	novel	371	3	NA	NA	-30536	14234	multi-exon	FALSE	canonical	0	0	junction_2	25.5669056920595	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATCTCAAGAAACAAAA	350	False	NA	NA	False	AATAAA	-21	NA	70585802	70480865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_70481539_70495023_70495199_70497036_70497122_70500716_70500904_70555217_70555374_70556839_70556874_70585618
transcript_11132.nic	chr1	-	1221	5	ISM	ENSG00000027869.12	ENST00000368198.7	1599	9	2703	0	-20	0	3prime_fragment	FALSE	canonical	3	24	junction_3	8.61321658847611	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	2718	False	NA	-8	True	AATAAA	-30	NA	156814131	156806242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847
transcript_111327.nnic	chr5	+	1280	9	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31384	57778	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	31.0963723768545	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAACTCAAAAGGCAGAA	324	False	NA	NA	False	NA	NA	NA	70719799	70853692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70785437_70785626_70789207_70789293_70791131_70791307_70795780_70795917_70850809_70850925_70853535
transcript_111328.nnic	chr5	+	1955	9	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31384	58453	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_7	31.0963723768545	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTAAACCCAAAATCACT	324	False	NA	NA	False	AGTAAA	-24	NA	70719799	70854367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70785437_70785626_70789207_70789293_70791131_70791307_70795780_70795917_70850809_70850925_70853535
transcript_111330.nnic	chr5	+	1792	8	NNC	ENSG00000253366.3	novel	640	5	NA	NA	-31384	1070	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_6	26.7070272797713	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGG	324	False	NA	NA	False	NA	NA	NA	70719799	70796984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_70720034_70749576_70749611_70751076_70751233_70785437_70785626_70789207_70789293_70791131_70791307_70795780_70795917_70796200
transcript_11134.nic	chr1	-	1391	4	NIC	ENSG00000027869.12	novel	1599	9	NA	NA	-20	0	intron_retention	FALSE	canonical	3	37	junction_2	3.85861230093008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	2718	False	NA	-8	True	AATAAA	-30	NA	156814131	156806242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156806574_156807174_156807346_156809202_156809808_156813847
transcript_11135.nnic	chr1	-	933	4	NIC	ENSG00000027869.12	novel	1599	9	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	16.5193489244852	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	2718	False	NA	-8	True	AATAAA	-30	NA	156814131	156806242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156806574_156807174_156807346_156809660_156809808_156813847
transcript_111352.known	chr5	+	663	3	FSM	ENSG00000172058.16	ENST00000507348.5	663	3	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_1	863	2251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	248	False	NA	NA	False	AATAAA	-16	NA	70900977	70908115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70901150_70901824_70901934_70907733
transcript_111363.known	chr5	+	699	3	FSM	ENSG00000172058.16	ENST00000317633.14	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	1901	junction_1	65	6901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900668	70908115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70900877_70901824_70901934_70907733
transcript_111364.known	chr5	+	1889	3	FSM	ENSG00000172058.16	ENST00000354833.7	1889	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	925	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCAGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	70900686	70918530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70900877_70901824_70901934_70916940
transcript_111365.known	chr5	+	569	3	FSM	ENSG00000172058.16	ENST00000504458.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	947.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATCAGTGACCCTGCAA	44	False	NA	NA	False	AGTAAA	-13	NA	70900773	70905541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70900877_70901824_70901934_70905184
transcript_111378.known	chr5	+	1482	9	FSM	ENSG00000172062.17	ENST00000380707.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_8	283.696333030584	9070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	-1	True	NA	NA	False	AATAAA	-25	NA	70925086	70953015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940_70951995_70952438
transcript_111379.known	chr5	+	1445	8	FSM	ENSG00000172062.17	ENST00000506163.5	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_7	400.82608575342	6934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATATTATTTTGCCCT	7	False	NA	NA	False	TTTAAA	-29	NA	70925094	70953040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70952438
transcript_111380.known	chr5	+	900	8	FSM	ENSG00000172062.17	ENST00000351205.8	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_7	248.900111101065	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAAAGTGAATCTT	16	False	NA	NA	False	AAAAAG	-45	NA	70925103	70952006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940
transcript_111391.known	chr5	-	2077	17	FSM	ENSG00000145736.14	ENST00000330280.11	2077	17	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_16	146.977676876456	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	31	False	NA	NA	False	NA	NA	NA	71067650	71035075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
transcript_11140.known	chr1	-	1977	5	FSM	ENSG00000253831.3	ENST00000454449.3	1977	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.22474487139159	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCTGACCACCCCCCC	-2	True	NA	NA	False	AATAAA	-19	NA	157099808	157092042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_157093128_157097867_157097989_157098705_157098896_157099140_157099379_157099465
transcript_111400.known	chr5	-	4336	16	FSM	ENSG00000145736.14	ENST00000274400.9	4336	16	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	135.961007482129	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTTA	80	False	NA	NA	False	AATAAA	-24	NA	71067601	71032669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_11141.known	chr1	-	1539	4	FSM	ENSG00000117036.12	ENST00000326786.4	1539	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.05480466765633	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTGTGTACTGTACAG	504	False	NA	NA	False	AATAAA	-23	NA	157138474	157133144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_157134228_157135470_157135709_157136306_157136366_157138315
transcript_111416.known	chr5	-	1953	15	FSM	ENSG00000145736.14	ENST00000519783.5	1953	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	134.680366128134	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGCCACTGCACTCCAC	80	False	NA	NA	False	NA	NA	NA	71067601	71035015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061687_71061766_71062707_71062797_71067493
transcript_11142.known	chr1	-	5282	5	FSM	ENSG00000117036.12	ENST00000368192.9	5282	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.58602010819715	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTGAGAGTTGGTTT	-1	True	NA	-5	True	AATAAA	-18	NA	157138395	157121190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_157125980_157134111_157134228_157135470_157135709_157136306_157136366_157138315
transcript_111435.nnic	chr5	-	1006	9	NIC	ENSG00000145736.14	novel	860	8	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	55	junction_8	177.134129969354	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	NA	False	AATATA	-31	NA	71067737	71055029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
transcript_111438.nic	chr5	-	1022	8	ISM	ENSG00000145736.14	ENST00000522654.5	1106	10	-16	6941	-1	0	5prime_fragment	FALSE	canonical	3	164	junction_7	133.980199572739	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	-9	False	NA	NA	False	AATATA	-31	NA	71067690	71055029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067493
transcript_111440.known	chr5	-	860	8	FSM	ENSG00000145736.14	ENST00000523003.5	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	143.187047641345	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	-8	True	NA	NA	False	AATATA	-31	NA	71067689	71055029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_111457.nic	chr5	+	1659	10	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	55897	-42	-21770	5prime_fragment	FALSE	canonical	3	19	junction_8	3.77123616632825	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAGGAAGAAGCAAGAT	NA	False	NA	NA	False	AAGAAA	-2	NA	71455608	71489580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403
transcript_111459.nic	chr5	+	1474	9	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	58858	-42	-24731	5prime_fragment	FALSE	canonical	3	19	junction_8	4	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAAGGTATTGATTTTA	NA	False	NA	NA	False	AAGAAA	-21	NA	71455608	71486619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483
transcript_111467.nic	chr5	+	894	4	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	81394	-42	-47267	5prime_fragment	FALSE	canonical	3	30	junction_3	0.816496580927726	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAAAGCCATCGACTCCA	NA	False	NA	NA	False	AAGAAA	-7	NA	71455608	71464083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057
transcript_111468.nic	chr5	+	868	3	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	83551	-42	-49424	5prime_fragment	FALSE	canonical	3	31	junction_2	0.5	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAATTTATTTCTG	NA	False	NA	NA	False	NA	NA	NA	71455608	71461926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578_71458856_71461816
transcript_111470.nic	chr5	+	752	2	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-77	86628	-42	-52501	5prime_fragment	FALSE	canonical	3	32	junction_1	0	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGTAAGGGAGGAGAA	NA	False	NA	41	True	NA	NA	NA	71455608	71458849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578
transcript_111472.known	chr5	+	3473	17	FSM	ENSG00000131844.17	ENST00000682045.1	3473	17	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	96.919243928902	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	28	True	AATAAA	-17	NA	71586786	71658706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71586851_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_111474.known	chr5	+	3621	17	FSM	ENSG00000131844.17	ENST00000682727.1	3621	17	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_10	114.211358344956	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAATGTTTTCCTAATA	-8	True	NA	-10	True	AATAGA	-3	NA	71587295	71658668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71636103_71636168_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_111475.known	chr5	+	3624	17	FSM	ENSG00000131844.17	ENST00000340941.11	3624	17	0	0	0	0	multi-exon	FALSE	canonical	1	81	junction_12	68.8548915746006	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	2	True	NA	28	True	AATAAA	-17	NA	71587339	71658706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_111481.known	chr5	+	11790	7	FSM	ENSG00000131711.15	ENST00000296755.12	11790	7	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	68.3780341597764	927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATGTGTGTGCTGTGCT	5	True	NA	11	True	AATAAA	-18	NA	72107474	72209565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865_72200368_72203562_72203802_72205083
transcript_111485.known	chr5	-	2641	6	FSM	ENSG00000285804.2	ENST00000649991.1	2641	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.85472369909914	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTCGTAATTTGTTA	NA	False	NA	-1	True	AATAAA	-22	NA	72108000	72095854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72097971_72098278_72098438_72098757_72098915_72100922_72100999_72103577_72103635_72107924
transcript_11149.known	chr1	+	1439	2	FSM	ENSG00000271736.2	ENST00000662441.1	1439	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGGGCAATTTGTATAT	NA	False	NA	NA	False	AATAAA	-19	NA	157273759	157283966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_157273810_157282577
transcript_111490.known	chr5	-	2770	11	FSM	ENSG00000113048.17	ENST00000261413.10	2770	11	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	58.7676781913324	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCCACCACTAATATT	-6	True	NA	NA	False	ATTAAA	-25	NA	72320240	72219402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_111491.known	chr5	-	2628	11	FSM	ENSG00000113048.17	ENST00000457646.8	2628	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	229.636234074677	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	NA	False	NA	-5	True	AATAAA	-14	NA	72320255	72219527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320180
transcript_111492.nnic	chr5	-	3098	11	NNC	ENSG00000113048.17	novel	2770	11	NA	NA	19	0	intron_retention	FALSE	canonical	3	33	junction_2	224.596170937975	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	NA	False	NA	-5	True	AATAAA	-14	NA	72320627	72219527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_72221149_72223682_72223917_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_111497.known	chr5	-	486	5	FSM	ENSG00000113048.17	ENST00000520285.5	486	5	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	353.215497253447	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTGTCAGAATTGTAC	43	False	NA	NA	False	AATAAA	-15	NA	72320191	72294553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72294789_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_11150.known	chr1	+	1459	2	FSM	ENSG00000271736.2	ENST00000670336.1	1459	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGGCAATTTGTATATAA	NA	False	NA	NA	False	AATAAA	-21	NA	157274854	157283968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_157274923_157282577
transcript_111503.known	chr5	+	2195	11	FSM	ENSG00000049883.15	ENST00000308077.9	2195	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	26.4794259756514	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGATTTCTCCACTT	-10	True	NA	NA	False	NA	NA	NA	72320372	72360225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202_72358824_72359603
transcript_111508.known	chr5	+	11145	10	FSM	ENSG00000049883.15	ENST00000380639.10	11145	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	11.9422478600395	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCTCCTTGAATT	-10	True	NA	5	True	AATAAA	-15	NA	72320372	72368395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_111513.known	chr5	+	2029	9	FSM	ENSG00000049883.15	ENST00000543322.5	2029	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	30.1662062579967	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTCTGGTCACCAGTG	-16	True	NA	NA	False	AATATA	-17	NA	72320366	72359352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_111518.known	chr5	+	1440	8	FSM	ENSG00000049883.15	ENST00000503315.5	1440	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	32.286346390778	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCATCTGCAAAACAAT	15	True	NA	NA	False	NA	NA	NA	72320397	72358912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_111520.known	chr5	+	8489	25	FSM	ENSG00000083312.19	ENST00000337273.10	8489	25	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	36.9766959268492	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTGATTTTT	-14	True	NA	19	True	AATAAA	-15	NA	72816660	72914388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_111521.known	chr5	+	3028	25	FSM	ENSG00000083312.19	ENST00000506351.6	3028	25	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	22.7437033410715	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTATTCAGTCT	13	False	NA	49	True	NA	NA	NA	72848183	72908951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_111525.known	chr5	+	11040	24	FSM	ENSG00000083312.19	ENST00000680533.1	11040	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_23	51.6997292428183	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAAATGTTTGCAAACA	NA	False	NA	NA	False	AATAAA	-20	NA	72816311	72916733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72908708
transcript_111529.nic	chr5	+	3036	24	ISM	ENSG00000083312.19	ENST00000506351.6	3028	25	-116	3371	-53	0	5prime_fragment	FALSE	canonical	3	128	junction_1	23.1514288510448	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGGCTTTAAATTTAAA	1904	False	NA	40	True	AATAAA	-22	NA	72848067	72905580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302
transcript_111531.known	chr5	+	8412	24	FSM	ENSG00000083312.19	ENST00000679378.1	8412	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	41.7566992010426	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGTTGTTTAACTATA	-12	True	NA	-1	True	AATAGA	-31	NA	72848120	72914368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_11154.known	chr1	+	3457	6	FSM	ENSG00000158473.8	ENST00000673701.2	3457	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.56306816047562	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTCCTTCAAATAA	8	True	NA	NA	False	AATAAA	-20	NA	158180894	158186427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_158181163_158181489_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
transcript_111549.known	chr5	+	4921	26	FSM	ENSG00000157107.14	ENST00000430046.7	4921	26	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_6	10.4079969254415	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGGTTTATGTGTCTT	-15	True	NA	7	True	AATAAA	-19	NA	72956040	73090522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656_73034702_73037142_73037216_73041290_73041316_73051348_73051407_73052331_73052508_73054159_73054172_73054524_73054550_73056064_73056108_73058432_73058525_73063840_73063945_73068649_73068780_73074741_73074854_73077337_73077494_73078179_73078313_73081782_73081983_73082760_73082826_73087588_73087754_73088067
transcript_111551.nic	chr5	+	930	9	ISM	ENSG00000157107.14	ENST00000287761.7	1287	11	-60	3419	-30	-2488	5prime_fragment	TRUE	canonical	3	59	junction_6	9.1104335791443	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGATTAGTTATAATATG	28	False	NA	NA	False	NA	NA	NA	72956010	73034704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656
transcript_111554.known	chr5	-	744	1	FSM	ENSG00000272525.1	ENST00000607001.1	744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGTCTTAACCATGAA	7070	False	NA	-11	True	AATAAA	-21	NA	73498293	73497549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_73497500_73498300
transcript_111567.known	chr5	+	740	5	FSM	ENSG00000145741.17	ENST00000678135.1	740	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2116.09042517091	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGAAGAAGCCTGGGAAT	-5	True	NA	-31	True	NA	NA	NA	73498435	73505435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498559_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_11157.known	chr1	+	2442	6	FSM	ENSG00000158481.13	ENST00000368170.8	2442	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.46969384566991	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTATTTTTCTTCA	-51	True	NA	NA	False	AATAAA	-16	NA	158289922	158294774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_158290126_158291133_158291401_158292083_158292366_158292595_158292875_158293211_158293303_158293454
transcript_111572.known	chr5	+	897	6	FSM	ENSG00000145741.17	ENST00000335895.12	897	6	0	0	0	0	multi-exon	FALSE	canonical	2	3711	junction_3	563.777828581437	75463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	NA	False	NA	29	True	AATAAA	-16	NA	73498407	73505495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_111573.known	chr5	+	1237	6	FSM	ENSG00000145741.17	ENST00000380591.8	1276	6	7	32	7	-32	multi-exon	FALSE	canonical	2	574	junction_1	1781.45102655111	5492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGGTATAAAGTTCT	8	True	NA	NA	False	ATTAAA	-26	NA	73498448	73505635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498800_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_111574.known	chr5	+	1177	5	FSM	ENSG00000145741.17	ENST00000514360.5	1177	5	0	0	0	0	multi-exon	FALSE	canonical	3	4783	junction_1	172.322916351831	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	1	True	NA	29	True	AATAAA	-16	NA	73498441	73505495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498559_73499133_73499203_73502487_73503118_73504346_73504404_73505191
transcript_111575.known	chr5	+	377	4	FSM	ENSG00000145741.17	ENST00000507081.6	377	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2334.07002656066	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGAACGTTTACTTGTGG	69	False	NA	NA	False	NA	NA	NA	73498509	73504403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498559_73499133_73499203_73502915_73503118_73504346
transcript_111576.known	chr5	+	2165	4	FSM	ENSG00000145741.17	ENST00000679077.1	2165	4	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	2142.33055857919	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAATAAAGTTCTTTGC	16	True	NA	3	True	NA	NA	NA	73498456	73505469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498800_73499133_73499203_73502487_73503118_73504346
transcript_111581.known	chr5	+	5096	13	FSM	ENSG00000164338.10	ENST00000296792.9	5096	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	15.2285824101333	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGAGAAACCATCTT	-15	True	NA	15	True	AATAAA	-29	NA	73565742	73583380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73565913_73567261_73567435_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_111584.known	chr5	+	1828	13	FSM	ENSG00000164338.10	ENST00000508491.1	1828	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.0640399249131	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGTTCTGTGGAAGAGA	15	True	NA	11	True	ATTAAA	-15	NA	73565772	73580199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73565913_73567261_73567435_73568291_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_111587.known	chr5	+	2057	12	FSM	ENSG00000164338.10	ENST00000509005.5	2057	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.6907638411491	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAAGCCTCTTTCTTG	-15	True	NA	0	True	AAAACA	-10	NA	73565742	73580514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73565913_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_11159.known	chr1	+	2883	12	FSM	ENSG00000163565.20	ENST00000295809.12	2883	12	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	3.77464354400485	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCTTCCCCAGCAGTC	-19	True	NA	5	True	AATAAA	-24	NA	159009906	159055151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_159010162_159014660_159014946_159015871_159015988_159016532_159016701_159018228_159018652_159020340_159020530_159032523_159032692_159045296_159045465_159049431_159049600_159051678_159052099_159053532_159053725_159054820
transcript_111592.known	chr5	-	2161	9	FSM	ENSG00000164331.10	ENST00000296785.8	2161	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	9.51232752800281	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGTCATTTCTAGAAG	-12	True	NA	NA	False	AATAAA	-24	NA	73565639	73552189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562592_73562986_73565131
transcript_111599.known	chr5	-	1298	4	FSM	ENSG00000164331.10	ENST00000515804.1	1298	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	9.17726659862414	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6	True	NA	NA	False	AGTAAA	-1	NA	73565667	73557430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_73557641_73561129_73561289_73562592_73562986_73565131
transcript_111602.known	chr5	-	573	2	FSM	ENSG00000164331.10	ENST00000509433.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATATGATTTTCTGGA	469	False	NA	-77	True	NA	NA	NA	73565204	73562485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_73562986_73565131
transcript_111604.known	chr5	-	2993	21	FSM	ENSG00000164347.18	ENST00000296805.8	2993	21	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_11	33.1200845409549	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	13	True	NA	-5	True	AATAAA	-16	NA	74767117	74721205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_111609.known	chr5	-	2856	20	FSM	ENSG00000164347.18	ENST00000345239.6	2856	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	68.6274215725008	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	9	True	NA	-5	True	AATAAA	-16	NA	74767121	74721205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_111611.known	chr5	+	2021	14	FSM	ENSG00000049860.14	ENST00000511181.5	2021	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	138.465982834655	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	NA	False	NA	28	True	AATAAA	-19	NA	74640022	74721288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74640559_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_111612.known	chr5	+	1812	14	FSM	ENSG00000049860.14	ENST00000261416.12	1812	14	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_8	50.2630947935446	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	0	True	NA	28	True	AATAAA	-19	NA	74685232	74721288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_111615.known	chr5	-	6118	13	FSM	ENSG00000198780.13	ENST00000389156.9	6118	13	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_12	65.3496471978915	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	6	True	NA	-1	True	AATAAA	-14	NA	74866966	74777573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
transcript_11163.nic	chr1	+	1005	4	NIC	ENSG00000163565.20	novel	856	3	NA	NA	-21	-670	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	5.55777733351102	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTAAGCTTCAGGAAGA	-2	True	NA	1	True	NA	NA	NA	158999946	159015983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_159000396_159010002_159010162_159014660_159014946_159015871
transcript_111638.known	chr5	+	4337	6	FSM	ENSG00000164346.10	ENST00000610426.5	4337	6	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_5	24.5519856630783	4276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTTTTTTTTCTTC	-1	True	NA	NA	False	AATAAA	-16	NA	74767248	74780113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74773867_74774061_74776603
transcript_111643.known	chr5	+	1199	5	FSM	ENSG00000164346.10	ENST00000296802.9	1199	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	195.668725145333	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGCATTTGTGAGTG	-8	True	NA	22	True	AATATA	-19	NA	74766990	74776910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74776603
transcript_111649.known	chr5	+	645	3	FSM	ENSG00000164346.10	ENST00000514918.5	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	11.5	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTATTAGAATG	-2	True	NA	NA	False	AATAAA	-42	NA	74767247	74769554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74767364_74768930_74769119_74769213
transcript_111653.known	chr5	+	1684	6	FSM	ENSG00000049860.14	ENST00000513079.5	1684	6	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_3	31.359846938402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTGTTTTGAATAAAA	1	False	NA	-30	True	NA	NA	NA	74685195	74706168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218
transcript_111654.known	chr5	-	1870	15	FSM	ENSG00000164347.18	ENST00000427854.6	1870	15	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	35.9583091927304	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTGGTCTTGTTT	-16	True	NA	-1	True	AATATA	-13	NA	74767146	74736668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_111658.known	chr5	-	3154	17	FSM	ENSG00000113163.19	ENST00000645483.1	3154	17	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	18.1929759797566	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGAGTTTGACATTT	-16	True	NA	NA	False	TTTAAA	-6	NA	75511633	75373269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_111660.known	chr5	+	4530	20	FSM	ENSG00000113161.17	ENST00000287936.9	4530	20	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_12	58.2375972077476	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAGCAGTAACCTT	-16	True	NA	15	True	AGTAAA	-25	NA	75337219	75362101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_111664.known	chr5	+	3681	19	FSM	ENSG00000113161.17	ENST00000343975.9	3681	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	145.221765280247	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCCTGGGCCAGAGAA	-4	True	NA	19	True	AATAAA	-26	NA	75337231	75361423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_111676.known	chr5	+	4493	20	FSM	ENSG00000113161.17	ENST00000680160.1	4493	20	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_18	153.389172457337	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAATACCAATAAGTGTA	2	True	NA	3	True	AGTAAA	-13	NA	75337199	75362089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359512_75359984_75360140_75360287
transcript_111677.known	chr5	+	421	3	FSM	ENSG00000113161.17	ENST00000509431.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCAAATCATGTATTT	10	True	NA	NA	False	AATAAA	-5	NA	75337245	75344030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75337301_75342582_75342771_75343852
transcript_111683.nnic	chr5	-	2074	12	NNC	ENSG00000152359.15	novel	2185	12	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	23.6622236158456	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	NA	False	NA	NA	False	ATTAAA	-4	NA	75717488	75674201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_75674579_75677773_75677951_75685206_75685401_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_111684.known	chr5	-	2185	12	FSM	ENSG00000152359.15	ENST00000428202.7	2185	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.7849343156133	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAAAACACTAAATCAT	-27	True	NA	NA	False	TATAAA	-14	NA	75717437	75674123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_111689.nic	chr5	-	2019	11	NIC	ENSG00000152359.15	novel	2185	12	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	23.4266941756621	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	NA	False	NA	NA	False	ATTAAA	-4	NA	75717488	75674201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75712853_75712952_75717305
transcript_111693.nnic	chr5	-	1707	10	NNC	ENSG00000152359.15	novel	896	7	NA	NA	-40	3573	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	20.5035377856699	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTCTTTGCTGTCTGTA	NA	False	NA	-5	True	AATAAA	-21	NA	75717488	75686947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_75687329_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_111703.known	chr5	-	588	4	FSM	ENSG00000152359.15	ENST00000507421.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	42.9055810925442	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCATGGCTTTTTGGT	66	False	NA	NA	False	AATAAA	-19	NA	75717344	75707483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75707876_75712606_75712666_75712853_75712952_75717305
transcript_111705.nic	chr5	-	676	3	ISM	ENSG00000152359.15	ENST00000508467.5	577	4	-58	1908	-40	3	5prime_fragment	FALSE	canonical	3	83	junction_1	5.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGGCTTTTTGGTATG	NA	False	NA	NA	False	AATAAA	-22	NA	75717488	75707480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_75707876_75712853_75712952_75717305
transcript_111710.known	chr5	+	10824	13	FSM	ENSG00000122012.14	ENST00000502798.7	10824	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.623609564462324	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCTGTGTGACTGGCTT	4	True	NA	NA	False	AATAAA	-38	NA	76083382	76333956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_76083513_76131649_76132331_76194918_76195100_76209735_76209888_76285161_76285296_76285780_76285871_76291220_76291332_76291767_76291857_76295777_76295943_76298793_76298928_76300728_76300933_76301385_76301546_76325363
transcript_111713.known	chr5	+	5808	36	FSM	ENSG00000145703.17	ENST00000274364.11	5808	36	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_14	28.9901320297449	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTTAAGTTGTCTT	5	True	NA	20	True	AATAAA	-20	NA	76403284	76708132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025_76665176_76668680_76668845_76671758_76671984_76673448_76673590_76673951_76674037_76674476_76674710_76677217_76677351_76683114_76683218_76683775_76683918_76693354_76693443_76695453_76695667_76697986_76698148_76701075_76701214_76702481_76702591_76707199
transcript_111720.nnic	chr5	+	918	8	NNC	ENSG00000145703.17	novel	5808	36	NA	NA	-444	-10313	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	83.9735138029138	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAATGCAAGACTGAA	604	False	NA	NA	False	AAAAAG	-7	NA	76403979	76590565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_76404146_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407
transcript_111724.known	chr5	+	2861	2	FSM	ENSG00000164251.5	ENST00000296677.5	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTGTGCGTTTGT	-3	True	NA	10	True	TATAAA	-25	NA	76819029	76835315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_76819265_76832689
transcript_111725.nnic	chr5	+	874	4	NNC	ENSG00000171643.14	novel	671	3	NA	NA	-807	368	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.0724477007517	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCAGGGTCTCCCTCTTG	9273	False	NA	NA	False	AATAAA	-21	NA	76874493	76878587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_76874673_76875303_76875501_76877673_76877835_76878250
transcript_111726.nnic	chr5	+	1256	4	NNC	ENSG00000171643.14	novel	671	3	NA	NA	-1011	205	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_3	7.87400787401181	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTGAATAGTATTT	9069	False	NA	9	True	AATAAA	-19	NA	76874289	76921231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_76874673_76875303_76875501_76877673_76877835_76920716
transcript_111727.nnic	chr5	+	1507	4	NNC	ENSG00000171643.14	novel	671	3	NA	NA	-843	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	7.87400787401181	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTTCTGTCATATTTG	9237	False	NA	6	True	AATAAA	-20	NA	76874457	76921650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_76874673_76875303_76875501_76877673_76877835_76920716
transcript_111734.known	chr5	+	1645	7	FSM	ENSG00000145708.11	ENST00000274368.9	1645	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.3879226322456	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTTGGGCTTTATTTGC	0	True	NA	5	True	AATAAA	-23	NA	76953044	76969471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_76953216_76953600_76953695_76954028_76954187_76955652_76955864_76958740_76958890_76963342_76963461_76968727
transcript_111735.known	chr5	+	4490	14	FSM	ENSG00000164252.13	ENST00000312916.12	4490	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	23.639551653254	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTTTAATCACACTAC	-15	True	NA	51	True	CATAAA	-22	NA	77030403	77065234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77030977_77034417_77034521_77035540_77035744_77036555_77036721_77039530_77039720_77046346_77046678_77048160_77048273_77048935_77048988_77052705_77052808_77053964_77054131_77055513_77055597_77059615_77059744_77061702_77061803_77063051
transcript_111736.known	chr5	+	825	5	FSM	ENSG00000164252.13	ENST00000502408.1	825	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	64.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCAGATTCTTCTGCAAC	-9	True	NA	NA	False	AGTAAA	-28	NA	77030409	77039686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77030608_77034417_77034521_77035540_77035744_77036555_77036721_77039530
transcript_111761.known	chr5	+	3461	4	FSM	ENSG00000250802.7	ENST00000643269.1	3461	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.64279609239471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATAAACAATCCTTGAG	21	True	NA	-58	True	NA	NA	NA	77086735	77142217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77086905_77087486_77087620_77118319_77118522_77139260
transcript_111765.known	chr5	+	1136	4	FSM	ENSG00000250802.7	ENST00000643894.1	1136	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTATTCATTCATCAG	346	False	NA	NA	False	NA	NA	NA	77087112	77148261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77087304_77087486_77087620_77118319_77118522_77147651
transcript_111767.known	chr5	+	1691	3	FSM	ENSG00000250802.7	ENST00000512001.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTATTGTCTCTCTT	247	False	NA	NA	False	AATATA	-33	NA	77087013	77148534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77087620_77118319_77118522_77147651
transcript_111768.known	chr5	+	527	3	FSM	ENSG00000250802.7	ENST00000514114.5	527	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTCAGGGATTTTTAT	696	False	NA	NA	False	AATAAA	-21	NA	77087462	77151391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77087620_77118319_77118522_77151223
transcript_11177.known	chr1	+	3739	9	FSM	ENSG00000162706.13	ENST00000368125.9	3739	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	4.24264068711928	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTGTTCACTTCCT	0	True	NA	3	True	AATATA	-14	NA	159171614	159203313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_159171854_159191935_159192077_159192577_159192731_159193422_159193561_159193869_159194041_159196363_159196455_159196890_159197061_159199750_159199877_159200803
transcript_111770.known	chr5	-	432	2	FSM	ENSG00000132846.6	ENST00000505685.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCATTATGTTTGGATC	17	True	NA	NA	False	AATAAA	-17	NA	77087200	77079040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77079383_77087110
transcript_111775.known	chr5	-	3678	13	FSM	ENSG00000164253.14	ENST00000296679.9	3678	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	32.7951342935706	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTCAGGCTCCAC	0	True	NA	-5	True	ATTAAA	-28	NA	77492316	77430932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_111776.known	chr5	-	1507	11	FSM	ENSG00000164253.14	ENST00000515253.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	102.303519001059	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAGAAGTTTTATTAT	304	False	NA	-11	True	AATAGA	-22	NA	77492199	77432812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_111777.known	chr5	+	870	1	FSM	ENSG00000244019.1	ENST00000494599.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTTATACAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	77545396	77546266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77545400_77546300
transcript_111781.known	chr5	-	661	4	FSM	ENSG00000171530.15	ENST00000380377.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_2	67.726574465928	31230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAATCTGTTAGGTTCTA	4	True	NA	46	True	ATTAAA	-25	NA	77776339	77691165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77691499_77693265_77693353_77708241_77708348_77776204
transcript_111782.known	chr5	-	446	3	FSM	ENSG00000171530.15	ENST00000520361.5	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1091	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTGTTTATTTTAT	1	True	NA	-36	True	AATAAA	-12	NA	77776293	77691247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77691499_77708241_77708348_77776204
transcript_111783.known	chr5	-	551	5	FSM	ENSG00000171530.15	ENST00000518338.6	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1088.57349315515	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAATGAGTTCATCTA	224	False	NA	-55	True	NA	NA	NA	77776261	77691266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77691499_77693265_77693353_77705565_77705635_77708241_77708348_77776204
transcript_111784.known	chr5	-	2301	3	FSM	ENSG00000171530.15	ENST00000306388.10	2301	3	0	0	0	0	multi-exon	FALSE	canonical	3	2054	junction_1	67.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	7	True	NA	-29	True	AATAAA	-19	NA	77776287	77691240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77693353_77708241_77708348_77776204
transcript_111785.known	chr5	-	157	2	FSM	ENSG00000171530.15	ENST00000520039.1	157	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAAGACTTCTGTGT	20	True	NA	-4	True	NA	NA	NA	77776274	77693265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77693353_77776204
transcript_111786.known	chr5	+	300	2	FSM	ENSG00000287162.2	ENST00000658162.2	347	2	45	2	45	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGAGTGGTGTTATTT	36	False	NA	NA	False	AATATA	-11	NA	77958242	77959092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77958310_77958859
transcript_111788.known	chr5	-	3986	27	FSM	ENSG00000132842.14	ENST00000519295.5	3986	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	58.4626644628405	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCATTTTTAAT	2	True	NA	0	True	AATAAA	-18	NA	78294692	78002325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_78003056_78015409_78015549_78020691_78020790_78034360_78034446_78039042_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294439
transcript_111793.nic	chr5	-	1038	8	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-59	179263	-59	-59867	5prime_fragment	FALSE	canonical	3	229	junction_2	25.820415905849	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGCCGTATACTATGG	NA	False	NA	NA	False	NA	NA	NA	78294757	78181588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_111795.known	chr5	-	1479	2	FSM	ENSG00000245556.4	ENST00000421004.4	1482	2	0	3	0	-3	multi-exon	FALSE	canonical	3	58	junction_1	0	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGCATGTATATTTA	576	False	NA	-3	True	ATTAAA	-20	NA	78360507	78358800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_78359986_78360213
transcript_111797.nnic	chr5	+	1071	9	NNC	ENSG00000085365.18	novel	6143	9	NA	NA	-61	-8485	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	136.230904625199	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGATATGGATATCATG	-1	True	NA	NA	False	AATAAA	-2	NA	78360549	78467541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78467444
transcript_111798.known	chr5	+	6143	9	FSM	ENSG00000085365.18	ENST00000621999.5	6143	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_7	42.4144359269341	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGGTACCTCTGCTAA	-4	True	NA	11	True	AATAAA	-22	NA	78360616	78480739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_11180.known	chr1	+	729	3	FSM	ENSG00000158716.9	ENST00000368109.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	391	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	-26	True	NA	29	True	AATAAA	-19	NA	159780931	159782543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_159781001_159781098_159781368_159782152
transcript_111805.nic	chr5	+	3650	8	NIC	ENSG00000085365.18	novel	6143	9	NA	NA	-61	-534	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	134.5413979231	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTGTATAATTTTG	-1	True	NA	19	True	AATAAA	-16	NA	78360549	78478281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78459244_78459363_78475503
transcript_111806.known	chr5	+	1276	8	FSM	ENSG00000085365.18	ENST00000614488.4	1276	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	144.637477854116	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGGATTGCACATTGG	-10	True	NA	NA	False	NA	NA	NA	78360610	78476026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78449932_78450035_78459244_78459363_78475503
transcript_111807.known	chr5	+	1358	8	FSM	ENSG00000085365.18	ENST00000618166.4	1358	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	138.536667215814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAGGATTGCACATTGG	-10	True	NA	NA	False	NA	NA	NA	78360610	78476026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_78360729_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_11181.known	chr1	+	694	3	FSM	ENSG00000158716.9	ENST00000368108.7	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	290	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	2	True	NA	29	True	AATAAA	-19	NA	159780959	159782543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_159780994_159781098_159781368_159782152
transcript_111815.known	chr5	+	1603	3	FSM	ENSG00000085365.18	ENST00000506858.2	1603	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	184	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGCAAGAAAATATAAATA	NA	False	NA	NA	False	AATAAA	-23	NA	78457792	78476829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_78457952_78459244_78459363_78475503
transcript_11182.known	chr1	+	797	2	FSM	ENSG00000158716.9	ENST00000368107.2	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	4	True	NA	29	True	AATAAA	-19	NA	159780961	159782543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_159781368_159782152
transcript_111825.known	chr5	-	550	3	FSM	ENSG00000132837.15	ENST00000520855.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTTATTATTGTTTCT	-16	True	NA	NA	False	TTTAAA	-14	NA	79236005	79222145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79222382_79223807_79223927_79235810
transcript_111826.known	chr5	+	2470	8	FSM	ENSG00000145692.15	ENST00000274353.10	2470	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	2.9277002188456	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTGTATTTTATTCT	-1	True	NA	NA	False	ATTAAA	-20	NA	79111808	79132288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754_79127984_79130932
transcript_111827.nic	chr5	+	1588	7	ISM	ENSG00000145692.15	ENST00000274353.10	2470	8	-79	3910	-79	181	5prime_fragment	TRUE	canonical	3	6	junction_4	3.0368111930481	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCTGGGCATAGTGGT	NA	False	NA	NA	False	AATACA	-12	NA	79111729	79128378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754
transcript_111829.known	chr5	-	787	1	FSM	ENSG00000213757.3	ENST00000474167.1	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	25	False	NA	NA	False	NA	NA	NA	79284918	79284131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79284100_79284900
transcript_111832.known	chr5	+	3129	16	FSM	ENSG00000164329.14	ENST00000296783.7	3129	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	46.7430802959706	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-2	True	NA	11	True	AATAAA	-21	NA	79612572	79686648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_111838.known	chr5	+	3223	16	FSM	ENSG00000164329.14	ENST00000423041.6	3223	16	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	46.3338609082674	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	-19	True	NA	11	True	AATAAA	-21	NA	79612432	79686648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_11185.known	chr1	-	1844	12	FSM	ENSG00000213085.10	ENST00000368099.9	1844	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.36666330712481	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACAGCTTGGCTTTCTTG	-16	True	NA	NA	False	ATTAAA	-16	NA	159900165	159872363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_159872564_159872943_159873169_159876555_159876750_159877348_159877463_159880553_159880701_159884435_159884566_159886510_159886690_159887840_159888012_159888351_159888497_159890479_159890623_159893179_159893306_159900095
transcript_111850.known	chr5	+	5100	15	FSM	ENSG00000164329.14	ENST00000453514.6	5100	15	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	29.912798434852	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCTCATGAAATGAATA	-11	True	NA	NA	False	AATAAA	-24	NA	79612440	79688246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_111851.known	chr5	+	2997	14	FSM	ENSG00000164329.14	ENST00000504233.5	2997	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	55.5774421056414	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATGTTTGTAAAAAAT	-17	True	NA	NA	False	AATAAA	-17	NA	79612434	79686266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_111853.nnic	chr5	+	1571	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25622	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	1.78535710713571	132	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	79784374	79800222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79784685_79788970_79789105_79790969_79791070_79793436_79793611_79799369
transcript_111855.nnic	chr5	+	1451	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25657	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.43705983732471	129	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	79784409	79800222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79784600_79788970_79789105_79790969_79791070_79793436_79793611_79799369
transcript_111856.known	chr5	-	7931	9	FSM	ENSG00000177034.17	ENST00000512528.3	7931	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	27.9463772249642	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGATTTAATGTTATTT	-9	True	NA	-10	True	AATAAA	-29	NA	79991262	79976715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79983795_79985570_79985660_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
transcript_111857.known	chr5	-	4778	8	FSM	ENSG00000177034.17	ENST00000509852.6	4778	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	19.2904756027318	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAAAAACCCT	-6	True	NA	NA	False	NA	NA	NA	79991259	79979776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79983795_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
transcript_111863.known	chr5	+	3222	22	FSM	ENSG00000113296.14	ENST00000350881.6	3222	22	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_11	19.7499103014697	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTGCTCAGACATTGC	0	True	NA	22	True	AATAAA	-24	NA	80035347	80083287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80035626_80040076_80040281_80055784_80056033_80058205_80058315_80058707_80058791_80059439_80059492_80059702_80059906_80061694_80061833_80065408_80065478_80067972_80068126_80070305_80070411_80070642_80070751_80071020_80071181_80072277_80072397_80073274_80073328_80076854_80077049_80078048_80078228_80078920_80078970_80079061_80079259_80079904_80080078_80082405_80082546_80083079
transcript_111865.nnic	chr5	+	771	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-6	-35811	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	21	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGAATGCTGTCTCCTGT	NA	False	NA	3	True	AATAAA	-17	NA	79991304	80020095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79991413_79998331_79998376_80019476
transcript_111866.nnic	chr5	+	736	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-17	-35811	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	24	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGAATGCTGTCTCCTGT	NA	False	NA	3	True	AATAAA	-17	NA	79991293	80020095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79991413_79998331_79998376_80019522
transcript_111867.nnic	chr5	+	518	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-13	-35811	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	22.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGAATGCTGTCTCCTGT	NA	False	NA	3	True	AATAAA	-17	NA	79991297	80020095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79991413_79998331_79998376_80019736
transcript_111870.known	chr5	+	1586	6	FSM	ENSG00000152380.10	ENST00000282226.5	1586	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.96988664825584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCACGGCTCATTCC	-11	True	NA	NA	False	AGTAAA	-14	NA	80488099	80542563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80488149_80501791_80501918_80513603_80513770_80519692_80519911_80522002_80522139_80541672
transcript_111872.known	chr5	+	10805	19	FSM	ENSG00000039319.17	ENST00000505560.5	10805	19	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	24.0491395087457	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGGGATTTTCAATGC	3	True	NA	NA	False	AATAAA	-16	NA	80408063	80483379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80408154_80427491_80427546_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_111877.nic	chr5	+	533	4	ISM	ENSG00000039319.17	ENST00000505560.5	10805	19	-63	46407	-12	-187	5prime_fragment	FALSE	canonical	3	11	junction_2	36.3073301445069	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACAGGACTTGATCTTC	371	False	NA	NA	False	AATGAA	-42	NA	80408000	80436972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_80408154_80427491_80427546_80434108_80434218_80436755
transcript_111878.known	chr5	+	6680	19	FSM	ENSG00000039319.17	ENST00000510158.5	6680	19	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	25.399037602065	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTGTAGACATATAGT	10	False	NA	42	True	AATAAA	-44	NA	80408023	80479140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80408154_80411645_80411774_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_111880.nnic	chr5	+	1010	4	NNC	ENSG00000152380.10	novel	1586	6	NA	NA	-173	3287	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.98887651569859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATTCTGAGCAGTGTGG	NA	False	NA	NA	False	AATAAA	-20	NA	80487795	80516948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_80488149_80501791_80501918_80513603_80513770_80516583
transcript_111884.nnic	chr5	+	1905	3	NNC	ENSG00000240003.2	novel	752	2	NA	NA	-141972	86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	52	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAACAAGTCAAGATCTA	NA	False	NA	NA	False	AGTAAA	-42	NA	80358359	80501486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_80359377_80500271_80500998_80501324
transcript_111887.nnic	chr5	-	1862	3	Genic_Genomic	ENSG00000220157.4	novel	961	1	NA	NA	-141446	716	multi-exon	TRUE	non_canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAAGGAGATTTTAGAA	NA	False	NA	NA	False	AATAAA	-24	NA	80501486	80358363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_-_80359338_80500271_80500998_80501324
transcript_11190.known	chr1	-	1603	5	FSM	ENSG00000158710.15	ENST00000368096.5	1603	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	341.928720642183	2568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGTGTCTGGGGCC	5826	False	NA	-5	True	AATAAA	-23	NA	159923717	159918106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159923435
transcript_111902.nic	chr5	+	534	3	ISM	ENSG00000039319.17	ENST00000510995.1	2873	4	-137	3404	-67	-187	5prime_fragment	FALSE	canonical	3	68	junction_1	10.5	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACAGGACTTGATCTTC	316	False	NA	NA	False	AATGAA	-42	NA	80407945	80436972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_80408154_80434108_80434218_80436755
transcript_111903.nnic	chr5	-	1471	3	NNC	ENSG00000249042.6	novel	5383	3	NA	NA	-6	-2669	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATAACTAGTTTT	NA	False	NA	NA	False	AATAAA	-6	NA	80488101	80481829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80482941_80486184_80486221_80487777
transcript_111904.nnic	chr5	+	493	3	NNC	ENSG00000152380.10	novel	508	4	NA	NA	-4	-5653	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTGGTCTTGGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80487981	80505154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_80488149_80501791_80501918_80504954
transcript_111913.nnic	chr5	-	451	3	NNC	ENSG00000249042.6	novel	5383	3	NA	NA	-6	-3689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTATTTCATTTTCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	80488101	80482849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80482941_80486184_80486221_80487777
transcript_111914.known	chr5	-	4400	3	FSM	ENSG00000249042.6	ENST00000508000.6	4400	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	18	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATGTCTACAAAGAAT	NA	False	NA	NA	False	NA	NA	NA	80488070	80479160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80483167_80485465_80485562_80487772
transcript_111916.known	chr5	-	3730	5	FSM	ENSG00000189127.8	ENST00000338682.8	3730	5	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_2	7.3824115301167	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTACTGATTTTTAT	-15	True	NA	0	True	AATAAA	-15	NA	80570280	80556754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80560043_80563734_80563816_80566688_80566775_80568959_80569108_80570153
transcript_11192.known	chr1	-	709	5	FSM	ENSG00000158710.15	ENST00000320307.8	709	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	342.358273596535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCCACGAATGGTTAAT	14	True	NA	NA	False	NA	NA	NA	159924551	159918776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159924493
transcript_111925.nnic	chr5	-	1662	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-211	-4738	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	5.24933858267454	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGTGAGCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	80570491	80564706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80565827_80566688_80566775_80568959_80569078_80570153
transcript_111926.nnic	chr5	-	1689	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-208	-4738	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	2.94392028877595	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAGTGAGCAAACAAA	NA	False	NA	NA	False	NA	NA	NA	80570488	80564706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80565827_80566688_80566775_80568959_80569108_80570153
transcript_111930.nnic	chr5	-	662	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-155	-6428	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.8012344973464	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTCTGATTCCTGGG	NA	False	NA	NA	False	AATAAA	-24	NA	80570435	80566396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80566543_80566688_80566775_80568959_80569108_80570153
transcript_111932.known	chr5	+	3295	24	FSM	ENSG00000113318.11	ENST00000658259.1	3295	24	0	0	0	0	multi-exon	FALSE	non_canonical	2	6	junction_1	22.8707224041836	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACATTTGTGAACAAAAA	-2	True	NA	-40	True	ATTAAA	-7	NA	80655151	80875869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80655263_80656410_80656532_80665142_80665364_80670096_80670310_80672243_80672361_80672740_80672859_80674982_80675129_80678926_80679094_80725452_80725566_80728850_80728966_80741463_80741549_80744505_80744616_80761545_80761679_80767932_80768121_80768834_80769004_80775693_80775759_80778719_80778837_80787564_80787673_80792732_80792845_80813583_80813742_80854129_80854317_80864812_80864943_80873115_80873288_80875750
transcript_111933.known	chr5	+	531	2	FSM	ENSG00000113318.11	ENST00000512531.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGGCAACTCTGGT	-2	True	NA	NA	False	AGTAAA	-36	NA	80655151	80656513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80655580_80656410
transcript_111935.known	chr5	-	1447	5	FSM	ENSG00000228716.7	ENST00000504396.1	1447	5	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_4	338.99437679702	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTTTTTAGACAGC	1067	False	NA	NA	False	NA	NA	NA	80654558	80628222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654403
transcript_111939.nnic	chr5	-	1057	5	NNC	ENSG00000251450.2	novel	535	4	NA	NA	-331	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	4.30116263352131	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATTTAATAAGTTCAAC	86	False	NA	NA	False	AATAAA	-19	NA	80961238	80947693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80947995_80948328_80948405_80949760_80949949_80951446_80951481_80960780
transcript_111943.known	chr5	-	535	4	FSM	ENSG00000251450.2	ENST00000505694.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.49691252107735	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACTATTTAATAAGTTC	417	False	NA	NA	False	AATAAA	-16	NA	80960907	80947696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80947995_80948328_80948405_80951446_80951481_80960780
transcript_111949.known	chr5	-	909	3	FSM	ENSG00000247572.9	ENST00000505295.1	909	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATAGTGAGGGG	-4	True	NA	NA	False	NA	NA	NA	81301560	81244857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81245410_81246889_81246973_81301286
transcript_11195.known	chr1	-	1375	5	FSM	ENSG00000158710.15	ENST00000368097.9	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_4	79.192802703276	6721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTCTGGCTGTGTCTGG	-2	True	NA	-9	True	AATAAA	-19	NA	159925507	159918110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925449
transcript_111951.known	chr5	-	601	2	FSM	ENSG00000247572.9	ENST00000512287.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAGCCCTTTTGTTAA	-3	True	NA	-25	True	ATTAAA	-16	NA	81301523	81235758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81236123_81301286
transcript_111952.known	chr5	-	2063	2	FSM	ENSG00000247572.9	ENST00000669977.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCTAAAAAAGAAAATTTT	-9	True	NA	-50	True	AGTAAA	-1	NA	81301565	81237576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81239361_81301286
transcript_111953.known	chr5	-	2463	3	FSM	ENSG00000247572.9	ENST00000501927.2	2463	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAGAAAAACTTG	1	True	NA	NA	False	NA	NA	NA	81301555	81237827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81239356_81244743_81245410_81301286
transcript_111954.known	chr5	+	1476	10	FSM	ENSG00000131730.16	ENST00000254035.9	1476	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.98556196500987	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTGTTTCTCTGA	-1	True	NA	NA	False	AATAAA	-16	NA	81233321	81266398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_111955.known	chr5	+	1479	10	FSM	ENSG00000131730.16	ENST00000437669.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.97313070227992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATCTTTGCTTTGTTTCTC	-3	True	NA	NA	False	AATAAA	-13	NA	81233319	81266395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81233382_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_11196.known	chr1	-	4059	21	FSM	ENSG00000085552.18	ENST00000368094.6	4059	21	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_13	20.1292697334007	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTGTGTTATCTGT	5	True	NA	-5	True	AATAAA	-15	NA	159945613	159927040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934333_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
transcript_111963.nic	chr5	+	987	6	NIC	ENSG00000131730.16	novel	1476	10	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	2.87054001888146	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACACTATGGTAACTTC	64	False	NA	NA	False	AATAAA	-26	NA	81233270	81257923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81257732
transcript_111969.known	chr5	+	1580	6	FSM	ENSG00000131732.12	ENST00000407610.8	1580	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	46.9442222216963	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGGATTCCAAGTTAC	-3	True	NA	NA	False	AATAAA	-30	NA	81301586	81313297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81301699_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_111971.known	chr5	+	1248	6	FSM	ENSG00000131732.12	ENST00000438268.2	1248	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	79.5854258014619	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCTAGCACTATCATG	-5	True	NA	NA	False	AAAACA	-28	NA	81301640	81312662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81302056_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_111973.known	chr5	+	768	5	FSM	ENSG00000131732.12	ENST00000507402.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	79.2369863132111	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAACCAAGTAGTTGTA	0	True	NA	NA	False	ATTAAA	-41	NA	81301589	81312917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81301671_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_111974.known	chr5	+	818	5	FSM	ENSG00000131732.12	ENST00000506458.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	79.6692381035491	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATGCATAAATGTAAAA	8	True	NA	NA	False	TATAAA	-6	NA	81301622	81312972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81301699_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_111977.nic	chr5	+	339	2	ISM	ENSG00000131732.12	ENST00000407610.8	1580	6	-15	8345	-15	-4206	5prime_fragment	FALSE	canonical	3	88	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTACTTAAATGAAGATGT	NA	False	NA	NA	False	CATAAA	-19	NA	81301571	81304952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_81301699_81304740
transcript_111980.known	chr5	+	1372	6	FSM	ENSG00000131732.12	ENST00000380199.9	1372	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	51.2288980947277	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATTTTTCTGAATA	9	True	NA	31	True	AATAAA	-35	NA	81301623	81313154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81301671_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_111984.known	chr5	-	8780	17	FSM	ENSG00000145687.17	ENST00000320672.9	8841	17	-156	217	0	-217	multi-exon	TRUE	canonical	3	145	junction_14	17.7935205903722	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTGTATATAATTGAA	9648	False	NA	NA	False	CATAAA	-24	NA	81751253	81413020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_111989.known	chr5	-	1790	16	FSM	ENSG00000145687.17	ENST00000514493.5	1790	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	48.5502717694648	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATCCTGTGAATCACAA	9651	False	NA	-21	True	AATAAA	-42	NA	81751250	81419917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_111990.known	chr5	-	1521	16	FSM	ENSG00000145687.17	ENST00000505980.5	1521	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	48.542032187465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAACTCAGATGTTATGG	14	True	NA	-117	True	NA	NA	NA	81751047	81420013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_111994.nic	chr5	-	1696	15	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_14	48.2650526377259	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	NA	False	NA	-39	True	AATAAA	-24	NA	81616587	81419935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81616348
transcript_112005.known	chr5	-	1396	13	FSM	ENSG00000145687.17	ENST00000504985.5	1396	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	51.3492940555175	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	3906	False	NA	-39	True	AATAAA	-24	NA	81513717	81419935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627
transcript_11201.known	chr1	-	2270	7	FSM	ENSG00000162729.14	ENST00000314485.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_5	55.6856255140309	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-8	True	NA	NA	False	AATAAA	-16	NA	160098619	160091342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_112010.known	chr5	+	1795	9	FSM	ENSG00000152348.16	ENST00000458350.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	43.3804031216862	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTATAAACATGACC	18	False	NA	25	True	ATTAAA	-26	NA	81972050	82254792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81972307_81976192_81976328_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_112018.known	chr5	+	3029	8	FSM	ENSG00000152348.16	ENST00000282185.8	3029	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	23.7710164799446	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGGTGTTCTTGTCT	-10	True	NA	4	True	AATAAA	-17	NA	81972022	82256133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_11202.known	chr1	-	2191	8	FSM	ENSG00000162729.14	ENST00000614243.4	2191	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	150.039450594482	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGCAGGCTTGGCTG	37	False	NA	NA	False	AATAAA	-9	NA	160098828	160091349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408_160098518_160098798
transcript_11203.known	chr1	+	5435	23	FSM	ENSG00000018625.15	ENST00000361216.8	5435	23	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_15	8.39876515913781	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTCTTCCATAATTCA	17	True	NA	NA	False	AATAAA	-26	NA	160115758	160143591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160115874_160120905_160121011_160121191_160121252_160123212_160123417_160123942_160124057_160124295_160124431_160125135_160125254_160127551_160127821_160128651_160128851_160128979_160129090_160129265_160129401_160130101_160130292_160130421_160130598_160134483_160134621_160135144_160135296_160135433_160135603_160135838_160135994_160136246_160136371_160136569_160136716_160136900_160137032_160139639_160139742_160139892_160139985_160141293
transcript_112036.nic	chr5	+	1028	6	NIC	ENSG00000152348.16	novel	3029	8	NA	NA	-1	125	intron_retention	FALSE	canonical	3	45	junction_5	40.5788122053862	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTACAAAGGCTGTGAT	-11	True	NA	4	True	AATAAA	-17	NA	81972021	82276422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82276144
transcript_112050.known	chr5	+	1438	4	FSM	ENSG00000152348.16	ENST00000355178.8	1438	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	65.4285021140549	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTATTTTTCTGTGAGT	-8	True	NA	NA	False	AATAAA	-20	NA	81972024	82148117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82147189
transcript_112055.known	chr5	+	904	3	FSM	ENSG00000152348.16	ENST00000514253.2	904	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	43	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	82164444	82276857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_82164538_82178489_82178588_82276144
transcript_112056.known	chr5	+	618	5	FSM	ENSG00000152348.16	ENST00000513634.1	618	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	26.5753645318366	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTATGTGACTCTAAA	6221	False	NA	NA	False	TTTAAA	-9	NA	81987557	82252713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561
transcript_11206.nic	chr1	+	2101	7	ISM	ENSG00000018625.15	ENST00000472488.5	3114	20	-48	10747	-48	913	5prime_fragment	FALSE	canonical	3	41	junction_5	4.27200187265877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCCTAAGTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	160115710	160126455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_160115874_160120905_160121011_160121191_160121252_160123212_160123417_160123942_160124057_160124295_160124431_160125135
transcript_112066.known	chr5	-	595	4	FSM	ENSG00000186468.13	ENST00000503605.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_3	5426.75534325582	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCCCTATACAAAG	485	False	NA	-113	True	NA	NA	NA	82278143	82276154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82277930
transcript_112067.known	chr5	-	3252	4	FSM	ENSG00000186468.13	ENST00000296674.13	3252	4	0	0	0	0	multi-exon	FALSE	canonical	3	9445	junction_3	1326.67278055543	146829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGAGGTTTTGTCTGC	2	True	NA	-7	True	AATAAA	-17	NA	82278354	82273319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82278319
transcript_112068.known	chr5	-	576	3	FSM	ENSG00000186468.13	ENST00000504293.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	11837	junction_1	354.5	61045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATCTTACTGTCCC	677	False	NA	-18	True	AATAAA	-19	NA	82277951	82276059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82276256_82276397_82276519_82277692
transcript_112069.known	chr5	-	3142	5	FSM	ENSG00000186468.13	ENST00000651545.1	3142	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5016.0072268688	175375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTGAATAAAGCCCTTC	-12	True	NA	-36	True	NA	NA	NA	82278368	82273348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82275114_82275208_82276256_82276397_82276519_82277692_82277853_82278319
transcript_112070.known	chr5	-	836	3	FSM	ENSG00000186468.13	ENST00000507980.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	9445	junction_2	1550.5	5426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCATCCTGTGGAATAA	2	True	NA	-89	True	NA	NA	NA	82278354	82275877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82276519_82277692_82277853_82278319
transcript_11209.nnic	chr1	+	451	4	NNC	ENSG00000018625.15	novel	3114	20	NA	NA	-48	1156	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	22.573337271116	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAACGGTCCCTGCTT	NA	False	NA	NA	False	ATTAAA	-26	NA	160115710	160122431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_160115874_160120905_160121011_160121191_160121252_160122308
transcript_112090.nnic	chr5	+	834	2	Antisense	novelGene_ENSG00000248112.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTCTTGCTTTAAGAAT	NA	False	NA	NA	False	ATTAAA	-43	NA	82872390	82925444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_82872832_82925051
transcript_112095.known	chr5	+	1243	8	FSM	ENSG00000152422.16	ENST00000542685.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	41.910497442984	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	11	False	NA	21	True	AATAAA	-21	NA	83077556	83311069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_112096.known	chr5	+	1602	8	FSM	ENSG00000152422.16	ENST00000396027.9	1602	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	44.6889476360355	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTGTTTTTAATAAA	1	True	NA	17	True	AATAAA	-18	NA	83077546	83353760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353130
transcript_112099.nic	chr5	+	1255	8	NIC	ENSG00000152422.16	novel	1243	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	49.6041472920504	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	-1	True	NA	21	True	AATAAA	-21	NA	83077591	83311069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_1121.known	chr1	-	508	4	FSM	ENSG00000116251.11	ENST00000465387.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2774.45998749707	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACTTCCAGATTAACCA	9840	False	NA	NA	False	NA	NA	NA	6199553	6186722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199369
transcript_11210.nic	chr1	+	1512	3	ISM	ENSG00000018625.15	ENST00000472488.5	3114	20	-48	14767	-48	1160	5prime_fragment	FALSE	canonical	3	44	junction_1	3.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACGGTCCCTGCTTTAAA	NA	False	NA	NA	False	ATTAAA	-30	NA	160115710	160122435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_160115874_160120905_160121011_160121191
transcript_112100.known	chr5	+	1636	8	FSM	ENSG00000152422.16	ENST00000511817.1	1636	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	38.1639855874405	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGTTAACTTTTATTT	0	True	NA	44	True	AATAAA	-45	NA	83077592	83353787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
transcript_112109.known	chr5	+	1567	6	FSM	ENSG00000152422.16	ENST00000509268.1	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	22.8508205541945	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGTTTTTGTTAATTCA	8753	False	NA	NA	False	NA	NA	NA	83104907	83259339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529
transcript_11211.known	chr1	+	1878	11	FSM	ENSG00000143318.13	ENST00000368078.8	1878	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.41774468787578	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATTTTGGTGAAGT	-15	True	NA	NA	False	AATAAA	-21	NA	160190574	160201886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160191031_160192801_160192887_160193746_160193848_160195011_160195124_160195460_160195535_160195896_160196028_160197568_160197615_160198676_160198732_160198952_160199054_160199850_160199926_160201244
transcript_112110.known	chr5	-	3353	5	FSM	ENSG00000174695.10	ENST00000511450.5	3353	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	970.123188053971	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGAGTAAAAATGAGCAG	6	True	NA	NA	False	AATAAA	-17	NA	83077367	83054061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83071362_83071431_83077320
transcript_112111.known	chr5	-	562	4	FSM	ENSG00000174695.10	ENST00000503892.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	909.522951881919	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATCAACCTCAGTACTG	NA	False	NA	0	True	TATAAA	-31	NA	83077863	83056883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83077717
transcript_112113.known	chr5	-	596	3	FSM	ENSG00000174695.10	ENST00000504622.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	918	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCTTTATAGAATGAGA	NA	False	NA	-84	True	NA	NA	NA	83077453	83056726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83061876_83061912_83077320
transcript_112118.known	chr5	-	492	2	FSM	ENSG00000174695.10	ENST00000509770.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTACTCAAGTTCCTTT	-2	True	NA	49	True	AAAACA	-8	NA	83077424	83056766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83077320
transcript_11212.nic	chr1	+	1690	9	ISM	ENSG00000143318.13	ENST00000368078.8	1878	11	2819	0	756	0	3prime_fragment	FALSE	canonical	1	2	junction_8	0.927024810886958	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATTTTGGTGAAGT	8	False	NA	NA	False	AATAAA	-21	NA	160193393	160201886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_160193848_160195011_160195124_160195460_160195535_160195896_160196028_160197568_160197615_160198676_160198732_160198952_160199054_160199850_160199926_160201244
transcript_112120.known	chr5	-	134	1	FSM	ENSG00000238835.1	ENST00000459004.1	134	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCAAAAAGAGCATGCC	NA	False	NA	NA	False	AGTAAA	-32	NA	83064337	83064203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83064200_83064300
transcript_112121.known	chr5	-	4528	4	FSM	ENSG00000174695.10	ENST00000502346.2	4528	4	0	0	0	0	multi-exon	FALSE	canonical	3	1736	junction_3	109.414603940953	3501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTACTTTTGTCTT	-21	True	NA	-9	True	AATAAA	-20	NA	83077394	83052845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83077320
transcript_112122.known	chr5	+	2087	13	FSM	ENSG00000038427.16	ENST00000502527.2	2087	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	262.016578673946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTTTTCATCATTT	147	False	NA	NA	False	NA	NA	NA	83471924	83580448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
transcript_112124.known	chr5	+	3973	7	FSM	ENSG00000038427.16	ENST00000513960.5	3973	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	50.5887558872742	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAGAAAGTACAAA	-1	True	NA	NA	False	NA	NA	NA	83471776	83539684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006
transcript_112126.known	chr5	+	1825	6	FSM	ENSG00000038427.16	ENST00000513984.5	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	15.9499216299015	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTTCTAATCATTA	13	False	NA	NA	False	AATAAA	-29	NA	83471790	83512940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102
transcript_112127.nic	chr5	+	1181	3	ISM	ENSG00000038427.16	ENST00000513984.5	1825	6	-679	22650	-506	6686	5prime_fragment	FALSE	canonical	3	368	junction_2	17	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAATATCAAGATTGGTC	NA	False	NA	58	True	NA	NA	NA	83471111	83490290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_83472024_83483512_83483589_83490097
transcript_112128.known	chr5	+	498	2	FSM	ENSG00000038427.16	ENST00000503923.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTGGTGTTAATTGAA	33	False	NA	NA	False	CATAAA	-18	NA	83471617	83483604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83472024_83483512
transcript_112131.known	chr5	-	4849	5	FSM	ENSG00000145681.11	ENST00000274341.9	4849	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.80788655293195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTCTTCTCTTTAGC	0	True	NA	NA	False	ATTAAA	-21	NA	83720855	83637804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83641786_83644362_83644666_83652452_83652825_83673423_83673550_83720788
transcript_112132.nic	chr5	-	1012	3	ISM	ENSG00000145681.11	ENST00000274341.9	4849	5	-337	14538	-337	123	5prime_fragment	FALSE	canonical	2	7	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTGGCATCTTAT	NA	False	NA	NA	False	AATAAA	-14	NA	83721192	83652342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_83652825_83673423_83673550_83720788
transcript_112133.known	chr5	-	4814	11	FSM	ENSG00000164176.13	ENST00000296591.10	4814	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_9	64.6857016658241	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATTGTCTGAATGTGA	1	True	NA	-13	True	ATTAAA	-17	NA	84384880	83940553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_112136.known	chr5	-	4244	10	FSM	ENSG00000164176.13	ENST00000380138.3	4244	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	34.5960819875443	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTCTTTTGAAGCAGT	-4	True	NA	-13	True	AATAAA	-13	NA	84384386	83940599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84254083_84254213_84384307
transcript_112143.nic	chr5	-	1503	5	ISM	ENSG00000164176.13	ENST00000296591.10	4814	11	237	195922	237	-29816	5prime_fragment	FALSE	canonical	3	100	junction_3	71.5436929435432	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCTGGGAAAAAAGTAGT	238	False	NA	NA	False	AAAAAG	-7	NA	84384643	84136475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_112145.nic	chr5	-	840	4	ISM	ENSG00000164176.13	ENST00000296591.10	4814	11	405	239455	-89	-73349	5prime_fragment	FALSE	canonical	3	100	junction_2	69.0619689522067	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACACAAAACTGCCACC	-9	True	NA	NA	False	NA	NA	NA	84384475	84180008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_84180522_84229854_84229885_84254083_84254213_84384307
transcript_112150.nic	chr5	+	675	4	NIC	ENSG00000250320.7	novel	570	3	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.74165738677394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTCCCTTTATTTCT	4	True	NA	12	True	TATAAA	-24	NA	84382426	84417658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_84382539_84387821_84387937_84399584_84399653_84417278
transcript_112152.known	chr5	+	265	4	FSM	ENSG00000250320.7	ENST00000515688.6	703	4	96	342	-16	-342	multi-exon	FALSE	canonical	2	3	junction_1	2.86744175568088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATAGTGGCTCATGC	38	False	NA	NA	False	NA	NA	NA	84384555	84417316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84384600_84387821_84387937_84399584_84399653_84417278
transcript_112156.nnic	chr5	+	735	4	NIC	ENSG00000250320.7	novel	1809	2	NA	NA	-115	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	3.29983164553722	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTCCCTTTATTTCT	134	False	NA	12	True	TATAAA	-24	NA	84384706	84417658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_84384879_84387821_84387937_84399584_84399653_84417278
transcript_11216.nnic	chr1	+	1783	5	NIC	ENSG00000162734.13	novel	2694	6	NA	NA	9	604	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	224.178500307233	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCCCTTTTTTGTGGT	2	True	NA	13	True	ATTAAA	-13	NA	160205392	160214639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_160205523_160207132_160207238_160211542_160211717_160213109_160213266_160213421
transcript_112160.known	chr5	+	2404	2	FSM	ENSG00000250320.7	ENST00000653332.1	2404	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTGTATATATAGTG	64	False	NA	NA	False	NA	NA	NA	84382486	84390173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84382539_84387821
transcript_112161.known	chr5	+	3389	2	FSM	ENSG00000250320.7	ENST00000670929.1	3389	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTGTGTTTTTACA	1986	False	NA	NA	False	TATAAA	-36	NA	84384408	84391019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84384600_84387821
transcript_112162.known	chr5	+	2615	2	FSM	ENSG00000250320.7	ENST00000661098.1	2615	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACACATTTTGCACATG	249	False	NA	NA	False	NA	NA	NA	84384821	84390381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84384879_84387823
transcript_112163.known	chr5	+	1809	2	FSM	ENSG00000250320.7	ENST00000666514.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCTTTATAGCAGCATGA	NA	False	NA	NA	False	AATAAA	-14	NA	84399619	84419054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84399653_84417278
transcript_112167.known	chr5	+	496	4	FSM	ENSG00000127184.13	ENST00000505430.5	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	426.460106249368	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	5	True	NA	29	True	AATAAA	-14	NA	86617940	86620766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618054_86619352_86619497_86619738_86619879_86620667
transcript_112170.known	chr5	+	629	3	FSM	ENSG00000127184.13	ENST00000247655.4	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	11882	junction_2	172.5	51468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTATTTCTATGA	5	True	NA	11	True	AATAAA	-18	NA	86617940	86620962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618131_86619352_86619497_86620667
transcript_112173.known	chr5	+	369	3	FSM	ENSG00000127184.13	ENST00000511472.5	369	3	0	0	0	0	multi-exon	TRUE	canonical	3	1032	junction_1	5425	6112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	-8	True	NA	29	True	AATAAA	-14	NA	86617927	86620766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618054_86619352_86619497_86620667
transcript_112175.known	chr5	+	693	3	FSM	ENSG00000127184.13	ENST00000513124.1	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	341.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	-3	True	NA	29	True	AATAAA	-14	NA	86617985	86620766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618054_86619352_86619879_86620667
transcript_112183.known	chr5	+	581	3	FSM	ENSG00000127184.13	ENST00000510447.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_1	5904	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACAAATCGATCTTAG	155	False	NA	-3	True	AATAAA	-4	NA	86618174	86620948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618331_86619352_86619497_86620667
transcript_112188.known	chr5	+	347	3	FSM	ENSG00000127184.13	ENST00000515763.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	6104.5	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	4	False	NA	29	True	AATAAA	-14	NA	86617972	86620766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618131_86619352_86619443_86620667
transcript_112189.known	chr5	+	1584	2	FSM	ENSG00000127184.13	ENST00000509578.1	1584	2	0	0	0	0	multi-exon	FALSE	canonical	3	12227	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCTTAATGCCTCTT	20	False	NA	24	True	AATAAA	-9	NA	86617955	86620761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618131_86619352
transcript_11219.known	chr1	+	1021	4	FSM	ENSG00000162734.13	ENST00000368077.5	1021	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	198.488174850684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCATGGGCCTAGCAT	-11	True	NA	NA	False	NA	NA	NA	160205379	160214035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160205523_160211542_160211651_160213109_160213266_160213421
transcript_112192.known	chr5	+	4746	25	FSM	ENSG00000145715.15	ENST00000274376.11	4746	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	31.6095702368057	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGATTACTTCTGTCTA	25	True	NA	18	True	AATAAA	-19	NA	87267882	87391916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_87268991_87331347_87331501_87332506_87332643_87333266_87333338_87337973_87338092_87341289_87341322_87346671_87346725_87349213_87349365_87353156_87353236_87362550_87362672_87363347_87363505_87369812_87369901_87372117_87372196_87374162_87374321_87374839_87374917_87376392_87376566_87376880_87377041_87378395_87378539_87379734_87379851_87380508_87380596_87383712_87383781_87385300_87385390_87386825_87386904_87389392_87389528_87390799
transcript_112194.known	chr5	+	3776	25	FSM	ENSG00000145715.15	ENST00000456692.6	3776	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.2988833592198	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTAAAAGAGCTAAGCATT	-16	True	NA	33	True	AATAAA	-34	NA	87268932	87391931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_87269056_87331347_87331501_87332506_87332643_87333266_87333338_87337973_87338092_87341289_87341322_87346671_87346725_87349213_87349365_87353156_87353236_87362550_87362672_87363347_87363505_87369812_87369901_87372117_87372196_87374162_87374321_87374839_87374917_87376392_87376566_87376880_87377041_87378395_87378539_87379734_87379851_87380508_87380596_87383712_87383781_87385300_87385390_87386825_87386904_87389392_87389528_87390799
transcript_11220.known	chr1	+	2420	4	FSM	ENSG00000162734.13	ENST00000360472.9	2420	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	20.0055547841649	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGATTTTAAAATTTC	-7	True	NA	40	True	AATAAA	-21	NA	160205383	160215372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160205523_160211542_160211717_160213109_160213266_160213421
transcript_112205.known	chr5	-	1497	9	FSM	ENSG00000134480.16	ENST00000504878.1	1497	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	124.285709154351	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-3	True	NA	-11	True	AATAAA	-15	NA	87412904	87394273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412434
transcript_112206.known	chr5	-	1280	9	FSM	ENSG00000134480.16	ENST00000256897.9	1280	9	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	28.6966897045635	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	91	False	87412958	-11	True	AATAAA	-15	NA	87412930	87394273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412677
transcript_112216.known	chr5	-	451	4	FSM	ENSG00000134480.16	ENST00000511207.5	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	18.6726180988812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGCTAGAATAGCACC	7582	False	NA	-17	True	AATAAA	-9	NA	87401774	87394279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701
transcript_112232.known	chr5	+	1550	7	FSM	ENSG00000247828.9	ENST00000656152.1	1550	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	41.2246555136877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTATGCTGACTGAAAT	-2	True	NA	NA	False	AAAAAG	-44	NA	88269033	88292275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435_88287623_88291383
transcript_112239.known	chr5	+	932	7	FSM	ENSG00000247828.9	ENST00000661351.1	932	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	39.1578004149024	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	-21	True	NA	11	True	AATAAA	-23	NA	88269014	88287657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88269467_88269688_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_11224.known	chr1	-	4106	14	FSM	ENSG00000132716.19	ENST00000368073.7	4106	14	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_13	209.176039222028	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	16	True	NA	-4	True	AGTAAA	-22	NA	160262451	160215714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
transcript_112245.known	chr5	+	4044	6	FSM	ENSG00000247828.9	ENST00000658094.1	4044	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	44.8258853788746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTTACAATAGCTACAAAA	-2	True	NA	NA	False	AATACA	-16	NA	88268914	88294850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88287435_88287623_88291383
transcript_11225.known	chr1	-	3972	14	FSM	ENSG00000132716.19	ENST00000326837.6	3972	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	214.504492994419	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-9	True	NA	-4	True	AGTAAA	-22	NA	160262476	160215714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
transcript_112254.known	chr5	+	1700	6	FSM	ENSG00000247828.9	ENST00000504636.2	1700	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	41.8349136487695	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	0	True	NA	11	True	AATAAA	-23	NA	88268995	88287657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88269467_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
transcript_112258.known	chr5	+	711	6	FSM	ENSG00000247828.9	ENST00000662970.2	715	6	0	4	0	-2	multi-exon	FALSE	canonical	3	10	junction_4	39.2295806758115	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	-21	True	NA	7	True	AATAAA	-19	NA	88269014	88287653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
transcript_112259.nic	chr5	+	752	6	FSM	ENSG00000247828.9	ENST00000688398.1	712	6	-44	4	-6	-2	multi-exon	FALSE	canonical	3	15	junction_4	37.991578014081	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	54	False	NA	7	True	AATAAA	-19	NA	88268970	88287653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_112263.known	chr5	+	3120	6	FSM	ENSG00000247828.9	ENST00000667127.1	3120	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	45.6350742302453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATACTACTGGTGCAAA	-1	True	NA	NA	False	NA	NA	NA	88269077	88290200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88283009_88283087_88285740_88285852_88287435
transcript_112268.known	chr5	+	645	6	FSM	ENSG00000247828.9	ENST00000507736.2	645	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	39.7421690399505	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	2	True	NA	11	True	AATAAA	-23	NA	88269037	88287657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269076_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_112274.nic	chr5	+	675	5	FSM	ENSG00000247828.9	ENST00000688087.1	636	5	-41	2	-18	0	multi-exon	FALSE	canonical	3	13	junction_4	40.3391869030599	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTGGTAGTTTGTTA	NA	False	NA	9	True	AATAAA	-21	NA	88268849	88287655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282714_88282867_88287435
transcript_112279.nnic	chr5	+	825	5	NIC	ENSG00000247828.9	novel	880	5	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	47.4414112353332	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTTTCTTGTGATTT	NA	False	NA	28	True	AATAAA	-24	NA	88268849	88436672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_88269028_88270525_88270586_88282041_88282107_88410072_88410195_88436272
transcript_112288.known	chr5	+	553	5	FSM	ENSG00000247828.9	ENST00000668037.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	40.2018345352547	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTGGTAGTTTGTTA	28	False	NA	9	True	AATAAA	-21	NA	88269063	88287655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88287435
transcript_112298.known	chr5	+	5261	4	FSM	ENSG00000247828.9	ENST00000669353.1	5261	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	44.7288124888943	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTCTATTGTTT	0	True	NA	-19	True	NA	NA	NA	88268916	88287627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282602
transcript_11230.known	chr1	-	3867	14	FSM	ENSG00000132716.19	ENST00000368074.6	3867	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	213.897752491021	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	3	True	NA	-9	True	AGTAAA	-17	NA	160262549	160215719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
transcript_112307.known	chr5	+	3379	4	FSM	ENSG00000247828.9	ENST00000658478.1	3379	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	28.5462587546755	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGAATAAATCAATGT	-26	True	NA	NA	False	NA	NA	NA	88268890	88439332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88410072_88410195_88436272
transcript_112309.known	chr5	+	4644	4	FSM	ENSG00000247828.9	ENST00000660783.1	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	44.6119067315243	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTAAGTAACTTT	-21	True	NA	NA	False	NA	NA	NA	88269014	88287016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282602
transcript_112313.known	chr5	+	2177	4	FSM	ENSG00000247828.9	ENST00000669796.1	2177	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	29.1013554476229	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGCATTAAATAAATAATAAA	11	True	NA	NA	False	NA	NA	NA	88269046	88284693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714
transcript_112318.known	chr5	+	3315	4	FSM	ENSG00000247828.9	ENST00000671394.1	3315	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	28.0752955856608	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAATGCAAGACCAGTG	-21	True	NA	NA	False	NA	NA	NA	88269014	88439300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88410072_88410195_88436272
transcript_112322.known	chr5	+	3439	3	FSM	ENSG00000247828.9	ENST00000661377.2	3521	3	82	0	20	0	multi-exon	FALSE	canonical	3	90	junction_1	14.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATTACAAAATTA	36	True	NA	NA	False	NA	NA	NA	88268952	88285345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88282041
transcript_112327.known	chr5	+	585	3	FSM	ENSG00000247828.9	ENST00000504922.6	633	3	48	0	1	0	multi-exon	FALSE	canonical	3	29	junction_2	30.5	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTGATGAACTATAC	-1	True	NA	41	True	AATAAA	-37	NA	88268915	88436685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88436272
transcript_112328.known	chr5	+	3391	3	FSM	ENSG00000247828.9	ENST00000659005.2	3454	3	63	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCCCCATCTGTACAAA	-1	True	NA	NA	False	NA	NA	NA	88269077	88285330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041
transcript_112331.known	chr5	+	552	3	FSM	ENSG00000247828.9	ENST00000657972.2	558	3	0	6	0	-1	multi-exon	FALSE	canonical	3	29	junction_2	30	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGGTTTCTTGTG	-12	True	NA	24	True	AATAAA	-43	NA	88269023	88436668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88436272
transcript_112333.known	chr5	+	3263	3	FSM	ENSG00000247828.9	ENST00000665319.2	3349	3	86	0	72	0	multi-exon	FALSE	canonical	0	0	junction_1	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAATCAATGTGGCAA	72	False	NA	NA	False	NA	NA	NA	88392266	88439337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88392343_88410072_88410195_88436272
transcript_112334.known	chr5	+	2562	2	FSM	ENSG00000247828.9	ENST00000656903.1	2562	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTTACAAAAATATAAAAA	14	True	NA	NA	False	NA	NA	NA	88268930	88272990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525
transcript_112335.known	chr5	+	4976	2	FSM	ENSG00000247828.9	ENST00000664347.1	4976	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGCTTAGCTTCCCAGA	-18	True	NA	NA	False	NA	NA	NA	88268898	88274314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88269467
transcript_112337.known	chr5	+	2715	2	FSM	ENSG00000247828.9	ENST00000655966.1	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACAGAGCGAGACTATC	-21	True	NA	NA	False	NA	NA	NA	88269014	88273135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525
transcript_112338.known	chr5	+	1086	5	FSM	ENSG00000247828.9	ENST00000657617.1	1086	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	36.3386846212132	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACTCTATAGTATTTC	-6	True	NA	NA	False	AATAAA	-17	NA	88269072	88427376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88410072_88410195_88424427_88424549_88426640
transcript_112340.known	chr5	-	2804	13	FSM	ENSG00000164180.14	ENST00000511087.5	2804	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	30.7322667927737	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATAGGACTTGTTTTA	37	False	NA	NA	False	NA	NA	NA	88268799	88195046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205800_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88221673_88221761_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_112343.known	chr5	-	2750	12	FSM	ENSG00000164180.14	ENST00000296595.11	2750	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	10.7218784588313	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATAGGACTTGTTTTA	-9	True	NA	NA	False	NA	NA	NA	88268845	88195046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_112355.nic	chr5	-	2505	11	NIC	ENSG00000164180.14	novel	2750	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	21.6723325925014	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGAGTAAGCAATTTATT	-21	True	NA	-12	True	ATTAAA	-18	NA	88268857	88195206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_88196489_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_112367.nic	chr5	-	568	3	ISM	ENSG00000164180.14	ENST00000515477.5	689	6	-267	7844	-257	0	5prime_fragment	FALSE	canonical	3	57	junction_2	8.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAAAAGATAGGTAAGT	NA	False	NA	NA	False	AAAAAG	-6	NA	88269114	88228458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_88228529_88240812_88240917_88268720
transcript_112368.known	chr5	-	570	4	FSM	ENSG00000164180.14	ENST00000503194.1	570	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7671766990109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAAAAGATAGGTAAGT	NA	False	NA	NA	False	AAAAAG	-6	NA	88269476	88228458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_88228529_88240812_88240917_88268787_88269071_88269363
transcript_112369.known	chr5	-	582	5	FSM	ENSG00000164180.14	ENST00000503755.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	24.963723680573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTATTTAAATTTAACC	7	True	NA	NA	False	NA	NA	NA	88268829	88206419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_88206500_88207028_88207181_88220562_88220720_88228444_88228529_88268720
transcript_112370.known	chr5	-	1421	3	FSM	ENSG00000245526.12	ENST00000515885.6	1421	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGGCTGATTTTTATTC	5726	False	NA	NA	False	AATGAA	-17	NA	88672746	88666301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_88667592_88671035_88671086_88672665
transcript_112381.nic	chr5	+	923	6	NIC	ENSG00000248309.8	novel	853	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.67332005306815	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAAATAATGAACTAC	5849	False	NA	NA	False	AATAAA	-13	NA	88889247	89168668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_88889481_88905208_88905271_88965840_88965916_89094958_89095030_89150532_89150596_89168249
transcript_112385.known	chr5	+	713	4	FSM	ENSG00000248309.8	ENST00000514158.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGATGGTAATGTGTTC	14	True	NA	NA	False	AATAAA	-19	NA	88889459	88941370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88889481_88905208_88905271_88905701_88905774_88940812
transcript_112395.nnic	chr5	-	676	3	NNC	ENSG00000248555.7	novel	621	5	NA	NA	81138	15350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGGGAAGGGGATCATC	31	False	NA	NA	False	ATTAAA	-16	NA	90208800	90137701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_90138201_90153287_90153345_90208680
transcript_112396.nnic	chr5	-	1037	2	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGGGAAGGGGATCATC	-10	False	NA	NA	False	ATTAAA	-16	NA	90208841	90137701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_-_90138201_90208303
transcript_112398.known	chr5	-	1026	6	FSM	ENSG00000153140.9	ENST00000522083.5	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	272.410425644835	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAAATTTGTTTTTAT	-1	True	NA	0	True	AATAAA	-27	NA	90409757	90393709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90394108_90396492_90396565_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_112399.known	chr5	-	738	6	FSM	ENSG00000153140.9	ENST00000522864.5	738	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	277.088000461947	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGAGCTTTTATATAAA	24	True	NA	-41	True	NA	NA	NA	90409732	90393858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90394108_90396492_90396565_90399471_90399550_90405684_90405800_90407698_90407835_90409644
transcript_1124.known	chr1	-	786	4	FSM	ENSG00000116251.11	ENST00000497965.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	2702.80673046043	118685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-1	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6200488
transcript_112405.known	chr5	-	2406	5	FSM	ENSG00000153140.9	ENST00000283122.8	2406	5	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	34.1275182221034	2812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGAGTCTTCTGTGA	0	True	NA	NA	False	AATAAA	-19	NA	90409756	90392256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90394108_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_112417.known	chr5	-	664	3	FSM	ENSG00000153140.9	ENST00000522842.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	32	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAAAACTTGAAGGGTG	-10	True	NA	NA	False	NA	NA	NA	90409766	90405393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90405800_90407698_90407835_90409644
transcript_112423.known	chr5	+	667	1	FSM	ENSG00000255647.3	ENST00000624106.1	667	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTGCTCGGTAAATTGA	599	False	NA	NA	False	AATAAA	-12	NA	90409999	90410666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90410000_90410700
transcript_112424.known	chr5	+	442	2	FSM	ENSG00000255647.3	ENST00000546238.2	442	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTCGGTAAATTGAGTG	7	True	NA	NA	False	AATAAA	-15	NA	90410032	90410669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90410305_90410499
transcript_112435.known	chr5	+	763	8	FSM	ENSG00000113356.13	ENST00000503373.5	763	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	324.762519200648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATTAGGCATGAAATT	NA	False	NA	NA	False	NA	NA	NA	90474260	90512129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90474319_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_112439.known	chr5	+	3251	8	FSM	ENSG00000113356.13	ENST00000504930.5	3251	8	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	181.576767371213	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	-6	True	NA	NA	False	AATAAA	-18	NA	90474888	90514553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_112465.nic	chr5	+	637	4	NIC	ENSG00000113356.13	novel	682	4	NA	NA	-14	-80	combination_of_known_junctions	FALSE	canonical	3	120	junction_3	372.578701603955	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTTATATGTGCCTA	-10	True	NA	13	True	AATAAA	-18	NA	90474849	90490778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_90475021_90485534_90485685_90487999_90488130_90490592
transcript_112470.known	chr5	-	4277	2	FSM	ENSG00000176055.10	ENST00000316610.7	4277	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATCTATAATTGATAT	4	True	NA	-32	True	AATAAA	-15	NA	90474771	90458208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90461553_90473838
transcript_112472.known	chr5	+	3290	8	FSM	ENSG00000113356.13	ENST00000651687.1	3290	8	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	154.865576997522	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTTAATGATTATTCA	4	True	NA	NA	False	AATAAA	-22	NA	90474863	90514557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_112473.known	chr5	+	682	4	FSM	ENSG00000113356.13	ENST00000514483.5	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	368.859804743693	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTGAAAAAGAATTGGC	0	True	NA	93	True	CATAAA	-20	NA	90474894	90490858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90490592
transcript_112474.known	chr5	+	2906	9	FSM	ENSG00000164199.18	ENST00000640109.1	2906	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	4.94816885322237	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGCTTGATACT	3	True	NA	NA	False	TATAAA	-39	NA	90558799	90630510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129_90625244_90627210_90627777_90628561_90628833_90629209
transcript_112479.nnic	chr5	+	1549	8	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-94	0	at_least_one_novel_splicesite	TRUE	canonical	3	23	junction_1	36.9710311305641	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929145	91164216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_112480.nic	chr5	+	1625	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	36.9710311305641	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929154	91164216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_112482.nic	chr5	+	1840	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	42.7579805177838	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929202	91164216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_90929662_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_112485.known	chr5	+	1466	7	FSM	ENSG00000164199.18	ENST00000640281.1	1466	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	4.60977222864644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACACACACACACACAAGA	10	False	NA	NA	False	NA	NA	NA	90558836	90627945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129_90625244_90627210
transcript_112487.nnic	chr5	+	1357	7	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_5	51.2144185426982	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929145	91164216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
transcript_112488.nic	chr5	+	1433	7	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_5	51.2144185426982	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929154	91164216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
transcript_112493.known	chr5	+	2221	6	FSM	ENSG00000164199.18	ENST00000638316.1	2221	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.85657137141714	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCATAAATAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	90558685	90626582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129
transcript_112497.nnic	chr5	+	1179	6	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	53.9614677339303	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929145	91164216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_112499.known	chr5	+	893	6	FSM	ENSG00000164199.18	ENST00000639821.1	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	53.9614677339303	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGCTTTTGTGCTAAA	NA	False	NA	NA	False	NA	NA	NA	90929239	91163939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_112504.nic	chr5	+	761	4	ISM	ENSG00000164199.18	ENST00000638316.1	2221	6	32	7271	32	-3360	5prime_fragment	FALSE	canonical	3	17	junction_1	1.24721912892465	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTTTCACATTCTGTA	NA	False	NA	NA	False	AATAAA	-17	NA	90558717	90619311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085
transcript_112506.known	chr5	+	1177	2	FSM	ENSG00000164199.18	ENST00000639884.1	1177	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGGGCGCAGTGGCTCA	NA	False	NA	NA	False	NA	NA	NA	90756567	90759991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90757162_90759408
transcript_112507.known	chr5	-	4262	3	FSM	ENSG00000176018.13	ENST00000315948.11	4262	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	4	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGCCAGTGAATTTAAT	-26	True	NA	-2	True	AATAAA	-23	NA	90529584	90515625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90519485_90525034_90525301_90529447
transcript_112510.nic	chr5	-	517	2	ISM	ENSG00000176018.13	ENST00000453259.2	553	4	-33	5521	-33	-5521	5prime_fragment	FALSE	canonical	3	232	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTTTATTCCTTTCTCC	-1	True	NA	NA	False	AATAAA	-18	NA	90529617	90524953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_90525301_90529447
transcript_112511.nic	chr5	-	423	2	ISM	ENSG00000176018.13	ENST00000453259.2	553	4	-33	5615	-33	-5615	5prime_fragment	FALSE	canonical	3	232	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTGTACGGTAAGTT	-1	True	NA	NA	False	ATTAAA	-16	NA	90529617	90525047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_90525301_90529447
transcript_112513.known	chr5	-	545	4	FSM	ENSG00000248323.8	ENST00000648751.2	570	4	25	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAAAGATTGCATTGCTA	23	False	NA	NA	False	ATTAAA	-37	NA	91314377	91286415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_91286607_91313637_91313778_91314079_91314248_91314331
transcript_112518.known	chr5	+	2500	3	FSM	ENSG00000281357.4	ENST00000625713.2	2500	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGCTGTTCTAGATGC	-28	True	NA	NA	False	AATAAA	-21	NA	91380348	91420715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_91380925_91418708_91418772_91418854
transcript_112520.known	chr5	+	522	3	FSM	ENSG00000281357.4	ENST00000629389.2	770	3	246	2	70	-2	multi-exon	FALSE	canonical	1	1	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTGTAGGTCCTATGAG	275	False	NA	NA	False	ATTAAA	-16	NA	91380651	91422963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_91380925_91418708_91418772_91422777
transcript_112525.known	chr5	-	4239	8	FSM	ENSG00000113369.9	ENST00000265138.4	4239	8	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_4	15.2569823426548	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGGTAAGAATTGTATC	-7	True	NA	92	True	ATTAAA	-29	NA	91383317	91368630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_91371457_91373683_91373839_91374113_91374277_91374921_91375179_91375510_91375614_91376620_91376769_91378693_91378776_91382812
transcript_11253.known	chr1	-	3504	7	FSM	ENSG00000162735.19	ENST00000472750.5	3504	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	228.952445329204	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGGGTGGCTTCATGA	6811	False	NA	-19	True	ATTAAA	-21	NA	160285154	160276866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160285054
transcript_112541.known	chr5	-	2659	6	FSM	ENSG00000237187.9	ENST00000656921.1	2659	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.35430821141545	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATACAGTCTAGTCC	9284	False	NA	NA	False	AATAAA	-7	NA	93570575	93409366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93411510_93553760_93553864_93554873_93554996_93563363_93563464_93569889_93570003_93570497
transcript_112544.known	chr5	-	271	2	FSM	ENSG00000237187.9	ENST00000607112.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGCAGAAATGGAAACAAA	NA	False	NA	NA	False	NA	NA	NA	93422413	93411401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93411510_93422250
transcript_112545.known	chr5	-	580	2	FSM	ENSG00000237187.9	ENST00000606165.5	580	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTGTTTTAAGTCTC	NA	False	NA	-1	True	AATAAA	-19	NA	93423242	93411017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93411510_93423154
transcript_112546.known	chr5	-	591	2	FSM	ENSG00000237187.9	ENST00000607195.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGGAAAAGTATATTC	NA	False	NA	-16	True	AATAAA	-4	NA	93422423	93411032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93411510_93422309
transcript_112547.known	chr5	-	1369	10	FSM	ENSG00000113391.19	ENST00000509163.5	1369	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	11.8112731252607	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTCGAGCGGACTC	-22	True	NA	NA	False	NA	NA	NA	94111676	93620928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94111510
transcript_112560.nic	chr5	-	1132	7	ISM	ENSG00000113391.19	ENST00000395965.8	4684	11	-16	263586	-3	0	5prime_fragment	FALSE	canonical	3	36	junction_6	12.5399362039845	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAAAACGCATCATT	-25	True	NA	NA	False	ATTAAA	-17	NA	94111679	93881310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_112562.nic	chr5	-	953	7	ISM	ENSG00000113391.19	ENST00000395965.8	4684	11	-16	263765	-3	-179	5prime_fragment	FALSE	canonical	3	36	junction_6	12.5399362039845	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGCAATTGTATATCAGA	-25	True	NA	93	True	AAAAAG	-4	NA	94111679	93881489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_112571.known	chr5	-	1392	11	FSM	ENSG00000113391.19	ENST00000502503.1	1392	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.5369553641709	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTCTTTACCGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	94111699	93621080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93621130_93737811_93737941_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94053125_94053228_94074645_94074770_94111510
transcript_112572.known	chr5	-	4684	11	FSM	ENSG00000113391.19	ENST00000395965.8	4684	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	10.3266645147405	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGAGTTTAAGTTGC	-9	True	NA	NA	False	AATAAA	-18	NA	94111663	93617724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_112573.known	chr5	-	965	6	FSM	ENSG00000113391.19	ENST00000506398.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	10.3227903204512	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAAAACGCATCATT	NA	False	NA	NA	False	ATTAAA	-17	NA	94074771	93881310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645
transcript_112576.known	chr5	-	830	1	FSM	ENSG00000249353.2	ENST00000502784.2	830	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	899	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATAGTTTAAACAATT	148	False	NA	NA	False	NA	NA	NA	93683667	93682837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93682800_93683700
transcript_112578.known	chr5	-	2262	5	FSM	ENSG00000185261.15	ENST00000329378.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	3.34477204006491	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAATTTTCAAATTGT	-28	True	NA	7	True	AATAAA	-26	NA	94618597	94519205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_94520918_94523929_94524099_94536995_94537128_94582432_94582584_94618499
transcript_112581.known	chr5	+	5583	21	FSM	ENSG00000133302.13	ENST00000265140.10	5583	21	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_7	11.9719463747546	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGCTTTTCCCCATGC	-9	True	NA	NA	False	AATAAA	-29	NA	94618668	94697621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271_94653422_94654629_94654753_94662297_94662352_94663749_94663909_94665860_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
transcript_112593.nic	chr5	+	1091	8	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-46	44284	-46	-1414	5prime_fragment	FALSE	canonical	3	74	junction_7	15.8449116277055	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGAAAGCAATTGCAA	282	False	NA	NA	False	AAGAAA	-1	NA	94618622	94653337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271
transcript_112596.nic	chr5	+	942	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-38	45851	-38	-2981	5prime_fragment	FALSE	canonical	3	105	junction_5	7.1278015934477	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGGTTCCAGTAAAGA	290	False	NA	-65	True	AAAAAG	-6	NA	94618630	94651770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_112597.nic	chr5	+	1017	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-38	45776	-38	-2906	5prime_fragment	FALSE	canonical	3	105	junction_5	7.1278015934477	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAACTTTCCAAATTAAA	290	False	NA	10	True	NA	NA	NA	94618630	94651845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_112600.nic	chr5	+	880	6	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-46	48025	-46	-5155	5prime_fragment	FALSE	canonical	3	105	junction_5	7.2	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAACTTTATAGGCTGAA	282	False	NA	NA	False	AATGAA	-34	NA	94618622	94649596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453
transcript_112604.known	chr5	-	5677	43	FSM	ENSG00000198677.12	ENST00000358746.7	5677	43	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_21	26.6015467642285	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTTTATAGTGT	3	True	NA	-13	True	AATAAA	-15	NA	95554977	95463893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95464682_95467865_95467990_95469779_95469911_95478289_95478443_95482472_95482632_95484723_95484846_95490907_95491037_95494681_95494794_95494963_95495018_95497415_95497489_95498369_95498592_95502879_95503004_95503813_95503939_95506933_95507012_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524_95516587_95516671_95516751_95516915_95517061_95517145_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_112607.nic	chr5	-	2292	19	ISM	ENSG00000198677.12	ENST00000358746.7	5677	43	-46	58194	-46	0	5prime_fragment	FALSE	canonical	3	159	junction_6	19.7687245197004	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGAAGATTATGT	NA	False	NA	NA	False	AATATA	-33	NA	95555023	95522087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_112608.nic	chr5	-	1475	12	ISM	ENSG00000198677.12	ENST00000358746.7	5677	43	-46	64941	-46	0	5prime_fragment	FALSE	canonical	3	167	junction_4	22.7159972029761	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTGTGTTTATTTTTAA	NA	False	NA	NA	False	AATAAA	-18	NA	95555023	95528834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_112612.known	chr5	+	3365	8	FSM	ENSG00000164291.17	ENST00000380009.9	3365	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	11.5475945016921	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGAATGGCCTTCTCC	-9	True	NA	47	True	NA	NA	NA	95555100	95605102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95555405_95565997_95566128_95567889_95568050_95582915_95583199_95586561_95586734_95591400_95591626_95600846_95601072_95603236
transcript_112620.nic	chr5	+	1042	5	ISM	ENSG00000164291.17	ENST00000504873.5	1920	9	-136	17008	-54	0	5prime_fragment	FALSE	canonical	3	104	junction_3	10.4731800328267	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTAAGAATATTAGAGC	NA	False	NA	NA	False	NA	NA	NA	95555046	95586672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_95555405_95565997_95566128_95567889_95568050_95582915_95583199_95586561
transcript_112621.known	chr5	+	1088	2	FSM	ENSG00000164291.17	ENST00000504763.1	1088	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTTTTGCATTC	15	False	NA	NA	False	AATAAA	-35	NA	95555166	95557057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95555405_95556207
transcript_112625.known	chr5	+	2582	6	FSM	ENSG00000175449.14	ENST00000380005.9	2582	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	17.6113599702011	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAAATCTTCTCATC	13	True	NA	NA	False	AATAAA	-24	NA	95646776	95658082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95646818_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
transcript_112629.known	chr5	+	2788	6	FSM	ENSG00000175449.14	ENST00000458310.1	2788	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	22.0581050863396	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGTTTTAGAACTTTG	115	False	NA	1	True	AATAAA	-8	NA	95646878	95657133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95648075_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
transcript_112635.known	chr5	+	615	5	FSM	ENSG00000175449.14	ENST00000511684.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	14.6692706021806	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACACAGTGACAGTAGAC	-10	True	NA	NA	False	AATAAA	-9	NA	95646753	95656190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95646818_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_112638.known	chr5	+	2722	5	FSM	ENSG00000175449.14	ENST00000311364.8	2722	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	23.3291662945764	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGAACTTTGTGAATGT	90	False	NA	8	True	AATAAA	-15	NA	95646853	95657140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95648075_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_112647.known	chr5	+	464	2	FSM	ENSG00000175449.14	ENST00000513950.2	464	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTATGCTTGAAAAC	1728	False	NA	18	True	GATAAA	-21	NA	95654060	95656333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95654237_95656045
transcript_112651.known	chr5	+	5370	12	FSM	ENSG00000164292.13	ENST00000379982.8	5370	12	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_7	69.4305051207487	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACGAAGTGTCCTGTA	-2	True	NA	75	True	AATAAA	-16	NA	95731335	95796361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95731685_95731858_95732085_95736888_95737076_95748332_95748488_95752238_95752351_95755395_95755762_95763507_95763621_95768045_95768167_95780251_95780426_95783796_95783964_95788761_95788859_95793058
transcript_112655.nnic	chr5	+	719	5	NNC	ENSG00000164292.13	novel	333	3	NA	NA	-7106	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	294.511884310294	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAGAAAAGAAAAATGAGC	NA	False	NA	1	True	NA	NA	NA	95706415	95752287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_95706518_95731858_95732085_95736888_95737076_95748332_95748488_95752238
transcript_112662.known	chr5	-	932	3	FSM	ENSG00000173221.14	ENST00000237858.11	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	23	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTACAAATGGCT	0	True	NA	-12	True	AATAAA	-18	NA	95822726	95813848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95814390_95816506_95816627_95822455
transcript_112663.known	chr5	-	1366	3	FSM	ENSG00000173221.14	ENST00000379979.8	1366	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	125	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCCAATTCATTTG	12	True	NA	0	True	AATAAA	-24	NA	95822714	95813970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95814958_95816506_95816627_95822455
transcript_112664.known	chr5	-	5826	12	FSM	ENSG00000118985.16	ENST00000237853.9	5826	12	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_10	22.9958673973254	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTACTTGTTTTTCCT	-7	True	NA	-8	True	AATAAA	-17	NA	95961851	95885097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95888988_95889085_95889131_95891102_95891275_95895627_95895692_95898239_95898811_95900692_95900781_95900955_95901081_95906522_95906783_95913770_95913935_95919423_95919546_95943001_95943050_95961574
transcript_11267.nic	chr1	-	1365	5	NIC	ENSG00000132716.19	novel	4106	14	NA	NA	18	2087	intron_retention	FALSE	canonical	3	108	junction_4	141.549240549005	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGTAGCAGTAATATC	56	False	NA	NA	False	NA	NA	NA	160262496	160237134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160262116
transcript_112674.nic	chr5	-	907	5	ISM	ENSG00000175426.11	ENST00000311106.8	5136	14	-36	31502	-36	1548	5prime_fragment	FALSE	canonical	2	6	junction_3	3.90512483795333	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTTGTTTGAGAAAAT	NA	False	NA	NA	False	AATAAA	-16	NA	96433284	96421834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_112675.known	chr5	-	5136	14	FSM	ENSG00000175426.11	ENST00000311106.8	5136	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	3.22527004511333	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATCTCCCTCTTTTATT	-11	True	NA	NA	False	AAAAAG	-20	NA	96433248	96390332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_96393379_96394863_96395026_96397335_96397470_96398878_96399037_96399952_96400187_96408222_96408324_96410773_96410987_96412317_96412491_96416032_96416122_96421879_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_112677.known	chr5	+	3273	30	FSM	ENSG00000153113.24	ENST00000511049.5	3273	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.0211952120956	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAAAGAAACTTCTGCT	7	True	NA	NA	False	NA	NA	NA	96702799	96773570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96702916_96722638_96722699_96726753_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765223_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_112678.known	chr5	+	4356	30	FSM	ENSG00000153113.24	ENST00000395813.5	4356	30	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	52.1305185389434	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	-4	True	NA	NA	False	ATTAAA	-18	NA	96702788	96774679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_112681.known	chr5	+	2466	30	FSM	ENSG00000153113.24	ENST00000511782.5	2466	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.7663302373055	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGAAAGAAAATGAATTTG	13	True	NA	-18	True	NA	NA	NA	96702805	96772786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96702916_96722638_96722719_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_112683.known	chr5	+	4282	29	FSM	ENSG00000153113.24	ENST00000309190.9	4282	29	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	31.961452388393	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	8	True	NA	NA	False	ATTAAA	-22	NA	96702800	96774683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_112696.nic	chr5	+	1063	13	ISM	ENSG00000153113.24	ENST00000309190.9	4282	29	-23	31926	-3	948	5prime_fragment	FALSE	canonical	3	95	junction_1	32.9379677913229	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGACCTTAGAGTTGATT	-15	True	NA	23	True	NA	NA	NA	96702777	96742757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654
transcript_11270.known	chr1	-	738	4	FSM	ENSG00000132716.19	ENST00000497354.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	374.823514025823	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGACGCGGACTCTGAT	882	False	NA	NA	False	NA	NA	NA	160220934	160217683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160220458
transcript_112700.known	chr5	+	4263	31	FSM	ENSG00000153113.24	ENST00000675663.1	4263	31	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	48.794364428692	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGAGGCAAAGAACAAT	14	True	NA	NA	False	NA	NA	NA	96663003	96774481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96663167_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_112703.nic	chr5	+	481	6	ISM	ENSG00000153113.24	ENST00000509903.5	2171	27	-28	40830	-3	0	5prime_fragment	FALSE	canonical	3	95	junction_1	43.2064809953322	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGTGACAAGGTGAGCACA	-15	True	NA	-5	True	NA	NA	NA	96702777	96730849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779
transcript_112705.known	chr5	+	2727	29	FSM	ENSG00000153113.24	ENST00000675614.1	2727	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	70.2346649686984	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTAAACATTCTTCAGT	-12	True	NA	-9	True	AAAACA	-2	NA	96702780	96773041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96702916_96722638_96722699_96726753_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_112707.nic	chr5	+	389	5	ISM	ENSG00000153113.24	ENST00000508197.1	567	8	-79	10401	-3	0	5prime_fragment	FALSE	canonical	3	95	junction_1	46.7145587584856	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAATCAACAGAACCAA	-15	True	NA	NA	False	AATAAA	-36	NA	96702777	96729703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611
transcript_112708.nic	chr5	+	424	5	ISM	ENSG00000153113.24	ENST00000675858.1	2529	26	-22	42293	-3	0	5prime_fragment	FALSE	canonical	3	35	junction_3	68.3424282565377	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGTGACAAGGTGAGCACA	-15	True	NA	-5	True	NA	NA	NA	96702777	96730849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729611_96729726_96730779
transcript_112712.known	chr5	+	567	8	FSM	ENSG00000153113.24	ENST00000508197.1	567	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	73.1913901482731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACTATTGGCTGTAAGT	-3	True	NA	NA	False	AATATA	-1	NA	96702856	96740104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96736171_96736241_96737848_96737948_96740037
transcript_112713.known	chr5	-	4841	19	FSM	ENSG00000164307.13	ENST00000443439.7	4841	19	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	7.48001452431415	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATATTTGCAATTATTT	-20	True	NA	-4	True	AATAAA	-21	NA	96807945	96774483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_96776552_96780422_96780505_96781057_96781199_96781692_96781855_96783050_96783236_96783923_96784081_96785787_96785972_96786469_96786550_96788530_96788686_96790295_96790368_96790511_96790644_96792060_96792193_96793399_96793514_96793802_96793958_96795041_96795163_96797174_96797310_96800861_96801001_96803402_96803944_96807859
transcript_112717.known	chr5	-	5495	20	FSM	ENSG00000164307.13	ENST00000296754.7	5495	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.8088401288366	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATTGTCATCATTCTT	3	True	NA	NA	False	AATAAA	-20	NA	96808100	96760809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_96763229_96776403_96776552_96780422_96780505_96781057_96781199_96781692_96781855_96783050_96783236_96783923_96784081_96785787_96785972_96786469_96786550_96788530_96788686_96790295_96790368_96790511_96790644_96792060_96792193_96793399_96793514_96793802_96793958_96795041_96795163_96797174_96797310_96800861_96801001_96803402_96803944_96807859
transcript_112721.nic	chr5	+	2232	2	ISM	ENSG00000113441.16	ENST00000231368.10	12134	18	-29	56268	-29	-16839	5prime_fragment	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTTGAATTATAGTTTT	80	False	NA	NA	False	ATTAAA	-20	NA	96936050	96981245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_96936175_96979137
transcript_112722.known	chr5	+	12134	18	FSM	ENSG00000113441.16	ENST00000231368.10	12134	18	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_6	3.0338345784065	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGGACTCTTTGGA	-20	True	NA	NA	False	AATAAA	-17	NA	96936079	97037513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96936175_96979137_96979979_96985079_96985219_96986538_96986671_96993014_96993136_96993816_96993972_96996389_96996504_96998013_96998146_97003414_97003547_97006072_97006234_97006426_97006516_97013647_97013832_97014938_97015096_97022299_97022485_97024520_97024683_97026616_97026758_97027732_97027815_97028401
transcript_112725.known	chr5	-	3765	6	FSM	ENSG00000145721.12	ENST00000274382.9	3765	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.13541565040626	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTATTTGTTCA	7	True	NA	NA	False	AATAAA	-23	NA	97142611	97091866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_97095036_97096809_97096888_97105189_97105286_97107359_97107501_97124465_97124630_97142494
transcript_112729.known	chr5	-	3909	10	FSM	ENSG00000058729.11	ENST00000283109.8	3909	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	24.5029602645965	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTTATATTTGTGCTA	1	True	NA	-1	True	AATAAA	-17	NA	97183247	97160866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_97163226_97165050_97165148_97167466_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_112730.known	chr5	-	2149	8	FSM	ENSG00000058729.11	ENST00000508447.1	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_2	26.9117984898666	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTGAATTTTCTC	26	True	NA	NA	False	AATAAA	-19	NA	97183222	97166745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_112732.known	chr5	+	720	1	FSM	ENSG00000238000.1	ENST00000442824.1	720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAGGACTAGAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	98213401	98214121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_98213400_98214100
transcript_112733.known	chr5	+	300	3	FSM	ENSG00000174136.13	ENST00000507054.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	34.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCTGCCAGCGAATTC	3	True	NA	NA	False	NA	NA	NA	98769435	98772975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_98769626_98770597_98770674_98772941
transcript_112734.known	chr5	-	463	3	FSM	ENSG00000246763.7	ENST00000657458.1	463	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGCTTGCGATTTGTGC	9	True	NA	NA	False	NA	NA	NA	98773363	98770954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_98771185_98772621_98772799_98773307
transcript_112736.known	chr5	-	397	2	FSM	ENSG00000246763.7	ENST00000505677.1	397	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCGATTTGTGCAATCC	2	True	NA	NA	False	NA	NA	NA	98773469	98770949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_98771185_98773307
transcript_112738.known	chr5	-	8145	36	FSM	ENSG00000153922.11	ENST00000614616.5	8145	36	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_28	26.5430570498392	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATAGCCTGTTTGCTTAT	-5	True	NA	NA	False	AATAAA	-16	NA	98929007	98853984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98863407_98863587_98868494_98868636_98869753_98869883_98870686_98870804_98872050_98872202_98872416_98872556_98873592_98873724_98875071_98875114_98876397_98876559_98879551_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_112739.nnic	chr5	+	336	2	NNC	ENSG00000248489.3	novel	386	2	NA	NA	-45	-770	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCAGTTATTTGATTTG	1677	False	NA	NA	False	ATTAAA	-15	NA	98929125	98930246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_98929312_98930096
transcript_112740.nnic	chr5	+	903	2	NNC	ENSG00000248489.3	novel	386	2	NA	NA	-45	-203	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTCATTGTCTTATG	1677	False	NA	NA	False	AATAAA	-21	NA	98929125	98930813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_98929312_98930096
transcript_112741.known	chr5	-	488	5	FSM	ENSG00000247877.7	ENST00000504833.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.6393596310755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTCTCTCACCAAGAA	-16	True	NA	NA	False	AGTAAA	-44	NA	100535262	100450934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_100451098_100457056_100457125_100518529_100518612_100534079_100534153_100535160
transcript_112743.nic	chr5	-	602	4	NIC	ENSG00000247877.7	novel	488	5	NA	NA	9	196	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.63299316185545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTACAGGCCAACAT	-7	True	NA	NA	False	GATAAA	-16	NA	100535253	100450738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_100451098_100457056_100457125_100518529_100518612_100535160
transcript_11275.known	chr1	-	501	4	FSM	ENSG00000132716.19	ENST00000440682.5	501	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	176.385940482795	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGCAGCCTCGGCGCC	-1	True	NA	1	True	NA	NA	NA	160262528	160240090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160261284_160261351_160262448
transcript_112752.known	chr5	+	1287	3	FSM	ENSG00000174132.9	ENST00000312637.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1.5	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCAAATTATGTGTTT	19	True	NA	20	True	AATAAA	-23	NA	100535373	100586741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_100535965_100562053_100562189_100586180
transcript_112755.known	chr5	-	6321	5	FSM	ENSG00000113532.13	ENST00000231461.10	6321	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	10.7819293264239	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTATATCCATTTTAT	-11	True	NA	NA	False	AATAAA	-18	NA	100903282	100806932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_100812130_100856102_100856397_100886342_100886601_100895653_100895786_100902842
transcript_112756.nnic	chr5	-	2361	5	NNC	ENSG00000113532.13	novel	1794	3	NA	NA	-15	37075	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	22.3313120975907	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTCAACTGTGGTCAC	NA	False	NA	NA	False	AATATA	-36	NA	100903297	100848235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_100849458_100856102_100856397_100886342_100886601_100895653_100895786_100902842
transcript_112757.nnic	chr5	-	1537	5	NNC	ENSG00000113532.13	novel	1794	3	NA	NA	-15	36251	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	22.3313120975907	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCTTTAAAGTCATTT	NA	False	NA	-16	True	AATAAA	-18	NA	100903297	100849059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_100849458_100856102_100856397_100886342_100886601_100895653_100895786_100902842
transcript_112759.nic	chr5	-	1242	4	ISM	ENSG00000113532.13	ENST00000231461.10	6321	5	-15	49067	-15	29311	5prime_fragment	FALSE	canonical	3	44	junction_1	6.94422221866655	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTTTCCGTTATTTTA	NA	False	NA	NA	False	AGTAAA	-14	NA	100903297	100855999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_100856397_100886342_100886601_100895653_100895786_100902842
transcript_112760.nic	chr5	-	1104	4	ISM	ENSG00000113532.13	ENST00000231461.10	6321	5	-15	49205	-15	29173	5prime_fragment	FALSE	canonical	3	44	junction_1	6.94422221866655	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCGTCATTGAGACTTAT	NA	False	NA	0	True	AATAAA	-19	NA	100903297	100856137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_100856397_100886342_100886601_100895653_100895786_100902842
transcript_112761.nnic	chr5	-	1033	4	NNC	ENSG00000113532.13	novel	1794	3	NA	NA	-15	21575	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	27.1334152332916	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGCGACCTCATAATAT	NA	False	NA	NA	False	AATAAA	-19	NA	100903297	100863735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_100863924_100886342_100886601_100895653_100895786_100902842
transcript_112762.known	chr5	-	1794	3	FSM	ENSG00000113532.13	ENST00000451528.2	1794	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTTCCTTTTCTCTCT	57	False	NA	1	True	AATAAA	-21	NA	100903214	100885310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_100886601_100895653_100895786_100902842
transcript_112768.known	chr5	-	5069	13	FSM	ENSG00000173930.9	ENST00000310954.7	5069	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	6.13901457890434	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTGTTTGAGCTTATT	8	True	NA	0	True	ATTAAA	-20	NA	102296284	102233985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_102237019_102239250_102239389_102240717_102240783_102247251_102247443_102249637_102249789_102257114_102257311_102257942_102258088_102260212_102260320_102261911_102262034_102263683_102263781_102270623_102270807_102291342_102291607_102295907
transcript_11277.known	chr1	-	1426	4	FSM	ENSG00000132716.19	ENST00000475733.5	1426	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	175.98169096686	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	116	False	NA	40	True	AATAAA	-17	NA	160262436	160239221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160261284_160261326_160262275
transcript_112771.known	chr5	-	944	2	FSM	ENSG00000250682.6	ENST00000510145.1	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAAGGAGGCAGAATG	NA	False	NA	NA	False	NA	NA	NA	102671559	102609155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_102609767_102671226
transcript_112772.known	chr5	+	3978	24	FSM	ENSG00000145730.21	ENST00000510208.2	3978	24	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_22	44.6712418539183	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTAGCTGTCAGTGT	131	False	NA	9	True	AATAAA	-9	NA	102754782	103029707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103028184_103028239_103028886
transcript_112774.known	chr5	+	656	1	FSM	ENSG00000175749.11	ENST00000513279.1	656	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAGGTGTTTAATAAAGA	3005	False	NA	NA	False	NA	NA	NA	103032375	103033031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103032400_103033000
transcript_112777.known	chr5	-	3549	8	FSM	ENSG00000145723.17	ENST00000399004.7	3549	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	8.59995253902424	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-13	True	NA	0	True	AATAAA	-19	NA	103120138	103085999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_11278.known	chr1	-	1607	4	FSM	ENSG00000132716.19	ENST00000610139.5	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	144.962064002966	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	127	False	NA	40	True	AATAAA	-17	NA	160262425	160239221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160261284_160261359_160262116
transcript_112782.known	chr5	-	1040	5	FSM	ENSG00000145723.17	ENST00000508629.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.8464187579497	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTGACACATTCTTAA	28	False	NA	-2	True	ATTAAA	-18	NA	103120097	103087812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103088173_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_112785.known	chr5	+	1516	13	FSM	ENSG00000145725.20	ENST00000507921.5	1516	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	45.2679522399677	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTATGTATCCTGGAGGT	2	True	NA	NA	False	NA	NA	NA	103120253	103158289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103120489_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187
transcript_112786.known	chr5	+	2988	3	FSM	ENSG00000181751.10	ENST00000319933.7	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	13.5	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	0	True	NA	10	True	AATAAA	-15	NA	103258762	103278660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103258897_103265907_103265998_103275896
transcript_112789.known	chr5	+	1573	3	FSM	ENSG00000181751.10	ENST00000515669.5	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	66	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGGATACAAAGTATTTA	-10	True	NA	6	True	AATAAA	-7	NA	103259035	103277228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103259187_103265907_103265998_103275896
transcript_112793.known	chr5	+	2933	3	FSM	ENSG00000181751.10	ENST00000510890.1	2933	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	82	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTGTGTGGTGCTTT	-6	True	NA	17	True	AATAAA	-17	NA	103259423	103278371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103259792_103265907_103265998_103275896
transcript_112795.known	chr5	-	3488	7	FSM	ENSG00000112874.10	ENST00000230792.7	3488	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	13.0128141972954	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	1	True	NA	-2	True	ATTAAA	-14	NA	103562789	103548854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560255_103562702
transcript_112796.known	chr5	-	1781	7	FSM	ENSG00000112874.10	ENST00000507423.1	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	25.491283913439	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTGATGATGAAGAAA	1	True	NA	NA	False	CATAAA	-22	NA	103562789	103550507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560096_103560255_103562702
transcript_112803.known	chr5	-	934	2	FSM	ENSG00000112874.10	ENST00000508889.1	934	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGCATATAGCTAATTT	0	True	NA	NA	False	AATAAA	-40	NA	103562790	103559404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103560251_103562702
transcript_11281.known	chr1	-	439	3	FSM	ENSG00000132716.19	ENST00000419626.1	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	162.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCTCAGACCTGAGTT	145	False	NA	NA	False	NA	NA	NA	160262407	160240297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160262116
transcript_112822.nnic	chr5	-	1873	4	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1658	-211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.98887651569859	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCATTGTGAGGACCAT	NA	False	NA	NA	False	AATAAA	-14	NA	106982527	106815416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106818398_106818478_106980763_106980871_106980970
transcript_11283.known	chr1	-	517	3	FSM	ENSG00000132716.19	ENST00000407642.6	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	196	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGGAAGAAGAGCA	19	True	NA	-10	True	NA	NA	NA	160262448	160240101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160262275
transcript_112835.nnic	chr5	+	1060	3	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	5.5	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	106978759	106984050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_106979187_106980711_106980920_106983625
transcript_112839.nnic	chr5	-	2014	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1658	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	NA	False	NA	0	True	ATTAAA	-20	NA	106982527	106815196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106980763_106980871_106980970
transcript_11284.known	chr1	+	557	2	FSM	ENSG00000228606.3	ENST00000442130.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGGCCACTTCCTGGA	7	True	NA	4	True	AATAAA	-17	NA	160261743	160262778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160261923_160262400
transcript_112843.nnic	chr5	-	551	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-2976	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	NA	False	NA	0	True	ATTAAA	-20	NA	106983845	106815196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106980763_106980871_106983751
transcript_112844.known	chr5	-	602	3	FSM	ENSG00000251027.2	ENST00000505997.1	602	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCATCTGAATGGCTT	NA	False	NA	-8	True	ATTAAA	-12	NA	106980869	106815204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_106815547_106844060_106844215_106980763
transcript_112846.nnic	chr5	-	1793	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1658	-212	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTCATTGTGAGGACCA	NA	False	NA	NA	False	AATAAA	-13	NA	106982527	106815417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106980763_106980871_106980970
transcript_112856.nnic	chr5	+	826	2	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	177	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	106978785	106984050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_106979187_106983625
transcript_112859.nnic	chr5	-	2114	2	NIC	ENSG00000251027.2	novel	602	3	NA	NA	-1658	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	NA	False	NA	0	True	ATTAAA	-20	NA	106982527	106815196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_106815547_106980763
transcript_11286.known	chr1	-	728	3	FSM	ENSG00000132716.19	ENST00000447377.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	166	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCTGAAGGTGGTGGT	38	False	NA	NA	False	NA	NA	NA	160262514	160239783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160262448
transcript_112860.nnic	chr5	-	1893	2	NIC	ENSG00000251027.2	novel	620	4	NA	NA	-1658	-212	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTCATTGTGAGGACCA	NA	False	NA	NA	False	AATAAA	-13	NA	106982527	106815417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_106815547_106980763
transcript_112866.known	chr5	+	359	1	FSM	ENSG00000244245.1	ENST00000466800.1	359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTATTTCAATAAATT	NA	False	NA	-42	True	NA	NA	NA	108593608	108593967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_108593600_108594000
transcript_112867.known	chr5	-	436	1	FSM	ENSG00000272523.1	ENST00000606054.1	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	167	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAATCATTGCTCTTTGT	26	True	NA	-11	True	ATTAAA	-19	NA	108728260	108727824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_108727800_108728300
transcript_11287.known	chr1	-	3653	8	FSM	ENSG00000162735.19	ENST00000368072.10	3653	8	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	49.767623275887	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCTGTGACTCTGGA	5	True	NA	-6	True	AATACA	-20	NA	160285133	160276806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_112877.known	chr5	+	1420	11	FSM	ENSG00000151422.14	ENST00000618353.1	1420	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.4976187776086	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGGCGCCAAACTCAG	2	True	NA	-82	True	NA	NA	NA	108924605	109187578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_108924790_108946129_108946223_108954728_108954933_108959224_108959348_109037421_109037479_109044679_109044796_109047103_109047199_109100395_109100520_109180746_109180902_109186199_109186323_109187432
transcript_11288.known	chr1	-	5318	33	FSM	ENSG00000122218.16	ENST00000241704.8	5318	33	0	0	0	0	multi-exon	TRUE	canonical	3	776	junction_19	67.2791526031653	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAAAAAGCTATTC	8	True	NA	-16	True	AATAAA	-28	NA	160343250	160288593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_112889.known	chr5	-	4856	10	FSM	ENSG00000198961.10	ENST00000361189.7	4856	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_6	20.15556780595	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTCTAATATTTAATT	-7	True	NA	-18	True	AATAAA	-17	NA	109409974	109334721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402_109383521_109409841
transcript_11289.known	chr1	-	4664	33	FSM	ENSG00000122218.16	ENST00000368069.7	4664	33	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_17	161.106619272572	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCCATTTATTTCTTGG	10	True	NA	-12	True	AATAAA	-21	NA	160343248	160289272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305599_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_112894.nic	chr5	-	1400	4	ISM	ENSG00000198961.10	ENST00000361189.7	4856	10	-21	43606	-21	839	5prime_fragment	FALSE	canonical	3	372	junction_2	3.09120616516523	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAAACAGAAAATAACCAA	4	True	NA	-18	True	NA	NA	NA	109409995	109378327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_109379255_109381502_109381704_109383402_109383521_109409841
transcript_112895.known	chr5	+	6553	22	FSM	ENSG00000112893.10	ENST00000261483.5	6553	22	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	44.5094705711216	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCCTCTAGAGTAGTT	-1	True	NA	18	True	AATAAA	-19	NA	109689926	109869625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459_109789528_109817272_109817439_109819668_109819888_109820219_109820343_109823722_109823838_109842327_109842462_109845864_109846007_109847656_109847791_109855139_109855335_109865035_109865147_109866845
transcript_112898.nic	chr5	+	1533	5	ISM	ENSG00000112893.10	ENST00000261483.5	6553	22	126	113836	126	-64098	5prime_fragment	FALSE	canonical	3	175	junction_1	10.2072278312968	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGATATTCATTAT	3	True	NA	NA	False	AAAAAG	-1	NA	109690052	109755789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328
transcript_112907.nnic	chr5	-	1168	5	NNC	ENSG00000186952.15	novel	3115	14	NA	NA	90370	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	4.49305018890286	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGGCATTTTATAGT	NA	False	NA	-10	True	AATAAA	-18	NA	110535227	110420110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_110420757_110424822_110424917_110528587_110528836_110532224_110532344_110535166
transcript_112914.nnic	chr5	-	1007	4	NNC	ENSG00000186952.15	novel	1974	11	NA	NA	90283	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.43650214343336	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGGCATTTTATAGT	NA	False	NA	-10	True	AATAAA	-18	NA	110535314	110420110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_110420757_110424822_110424917_110532224_110532344_110535166
transcript_112916.nnic	chr5	-	532	4	NNC	ENSG00000186952.15	novel	3115	14	NA	NA	90283	39851	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.16024689946929	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCAAATAAAAAGCTGGA	NA	False	NA	NA	False	AATAAA	-17	NA	110535314	110528643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_110528836_110530657_110530731_110532224_110532344_110535166
transcript_112917.known	chr5	-	546	4	FSM	ENSG00000186952.15	ENST00000503527.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGCTATCCTTG	13	True	NA	NA	False	AATATA	-12	NA	110738918	110666767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_110666867_110667227_110667365_110734902_110735016_110738721
transcript_112921.known	chr5	-	437	3	FSM	ENSG00000186952.15	ENST00000502857.6	437	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACTGAATGGTTTTG	3929	False	NA	NA	False	AATAAA	-17	NA	110726705	110666645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_110666867_110667227_110667365_110726626
transcript_112922.nnic	chr5	+	1301	9	NNC	ENSG00000164209.17	novel	4745	8	NA	NA	-26	305	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_8	57.4020905542647	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGGTTAAGCACTTT	822	False	NA	12	True	AATAAA	-27	NA	110738980	110763089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203_110761448_110762849
transcript_112923.known	chr5	+	4745	8	FSM	ENSG00000164209.17	ENST00000355943.8	4745	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	25.1777355484352	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTTTTTCTCCTACT	-13	True	NA	10	True	AATAAA	-14	NA	110739006	110765157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203
transcript_112927.nic	chr5	+	1782	5	ISM	ENSG00000164209.17	ENST00000447245.6	1575	8	-60	12921	-26	-7688	5prime_fragment	FALSE	canonical	3	193	junction_3	10.4970233876085	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAATTGAAGCACAGGG	822	False	NA	NA	False	AGTAAA	-11	NA	110738980	110749343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162
transcript_112929.known	chr5	+	6416	23	FSM	ENSG00000134987.13	ENST00000513710.4	6416	23	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	30.7536532802632	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTTTTACTTTTGTTA	0	True	NA	9	True	AATAAA	-16	NA	111092347	111130502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169_111111279_111113073_111113154_111119012_111119121_111120495_111120594_111120995_111121142_111123804_111123925_111124107_111124190_111125607_111125796_111126733
transcript_112935.known	chr5	+	2126	15	FSM	ENSG00000134987.13	ENST00000505303.5	2126	15	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_7	31.784109108747	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATATGTCATTCTTAA	-27	True	NA	NA	False	AATGAA	-10	NA	111092320	111111552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169
transcript_112936.nic	chr5	+	1573	12	ISM	ENSG00000134987.13	ENST00000505303.5	2126	15	-141	4143	-141	3549	5prime_fragment	FALSE	canonical	3	195	junction_7	34.1794003013318	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTGAAGAAAGATGACAT	NA	False	NA	NA	False	NA	NA	NA	111092179	111107409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293
transcript_11294.nic	chr1	-	1713	12	ISM	ENSG00000122218.16	ENST00000649231.1	3969	31	-49	20118	-20	-815	5prime_fragment	FALSE	canonical	3	787	junction_5	87.4439608034296	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGACATTCTAATTT	280	False	NA	NA	False	NA	NA	NA	160343293	160309744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_112940.known	chr5	+	2411	2	FSM	ENSG00000145777.15	ENST00000379706.4	2411	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAGCATATAAAGTTG	-1	True	NA	NA	False	AATAAA	-19	NA	111073313	111078024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111073646_111075945
transcript_112941.known	chr5	+	562	2	FSM	ENSG00000134987.13	ENST00000515784.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGCTCATTTAGAATGT	-1	True	NA	NA	False	NA	NA	NA	111092346	111095209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111092619_111094919
transcript_112943.known	chr5	+	11942	11	FSM	ENSG00000152495.11	ENST00000282356.9	11942	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.96816441593117	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCATTCTGTGATTTCA	-8	True	NA	8	True	AATAAA	-22	NA	111224383	111494886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111224645_111344023_111344103_111374849_111374913_111376859_111376943_111394709_111394783_111446685_111446777_111449128_111449204_111473310_111473387_111478380_111478508_111482784_111482938_111484025
transcript_112944.known	chr5	+	4215	5	FSM	ENSG00000246859.3	ENST00000666013.1	4215	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.456832294801	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACAGGAAGTCTTCCCTG	NA	False	NA	NA	False	NA	NA	NA	111510395	111731029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111512509_111669418_111669636_111727944_111728067_111728536_111728761_111729490
transcript_112947.known	chr5	-	803	6	FSM	ENSG00000164211.13	ENST00000505803.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	84.2624471517413	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATACATTCAAACTTGT	-1	True	NA	NA	False	NA	NA	NA	111512562	111499881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512390
transcript_112951.known	chr5	-	577	6	FSM	ENSG00000164211.13	ENST00000455172.2	577	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	140.63769053849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATGCTTTTTTTCAGT	4	True	NA	-51	True	TATAAA	-34	NA	111512512	111500987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111501961_111502089_111505014_111505044_111506329_111506380_111507328_111507443_111512384
transcript_112953.known	chr5	-	1135	5	FSM	ENSG00000164211.13	ENST00000511137.5	1135	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	102.691284927203	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAATTTAAAATGTGGAA	-19	True	NA	NA	False	NA	NA	NA	111512535	111499401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111500107_111501001_111501117_111506329_111506380_111507328_111507443_111512384
transcript_112956.known	chr5	-	1467	5	FSM	ENSG00000164211.13	ENST00000502322.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	6.28490254498827	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTATTAATAGTGCTA	453	False	NA	NA	False	TTTAAA	-44	NA	111512590	111500146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
transcript_112961.known	chr5	-	981	4	FSM	ENSG00000164211.13	ENST00000511569.5	981	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	117.178875608571	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTATAATATGGTAGTC	-19	True	NA	NA	False	AGTAAA	-33	NA	111512535	111500463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111512384
transcript_112962.known	chr5	-	1186	4	FSM	ENSG00000164211.13	ENST00000509887.5	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	118.575807913007	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTCACTTTGGGATTT	-19	True	NA	NA	False	NA	NA	NA	111512535	111500245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111506329_111506380_111507328_111507443_111512384
transcript_112967.known	chr5	-	587	5	FSM	ENSG00000134986.14	ENST00000509427.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	776.75414385763	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAGAATTTCACACTGTG	-10	True	NA	50	True	NA	NA	NA	111757409	111730723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757328
transcript_112968.known	chr5	-	704	5	FSM	ENSG00000134986.14	ENST00000419114.6	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	781.025447728818	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACGTTTACAACCCTT	-1	True	NA	70	True	NA	NA	NA	111757555	111730703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757377
transcript_112969.known	chr5	-	2581	5	FSM	ENSG00000134986.14	ENST00000379671.7	2581	5	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_4	555.901969775247	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTCATTAAGGCTTA	11	True	NA	NA	False	GATAAA	-15	NA	111757724	111728811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757561
transcript_112970.known	chr5	-	475	5	FSM	ENSG00000134986.14	ENST00000508161.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	774.191675232949	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGTGAACCGCAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	111758203	111731026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757931
transcript_112974.known	chr5	-	1942	4	FSM	ENSG00000134986.14	ENST00000257435.12	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	1610	junction_3	147.741516018875	5380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-6	True	NA	-14	True	AATAAA	-20	NA	111757194	111729302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135
transcript_112975.known	chr5	-	577	3	FSM	ENSG00000134986.14	ENST00000507742.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	940	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCAAACTCCCACCG	839	False	NA	NA	False	NA	NA	NA	111757229	111730641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111757135
transcript_112977.known	chr5	+	292	3	FSM	ENSG00000224032.8	ENST00000508590.2	366	3	70	4	62	1	multi-exon	FALSE	canonical	2	33	junction_1	215.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTGTTTTAAGTGA	32	False	NA	36	True	AATAAA	-17	NA	112160933	112162311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112160992_112161702_112161776_112162150
transcript_112978.known	chr5	+	578	2	FSM	ENSG00000224032.8	ENST00000442823.3	605	2	27	0	20	0	multi-exon	FALSE	canonical	2	27	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGATTAACTGCCAGAA	21	False	NA	49	True	AATAAA	-30	NA	112160891	112162324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112161296_112162150
transcript_112979.known	chr5	+	2621	3	FSM	ENSG00000224032.8	ENST00000413221.7	2621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	232	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATGCAGTCTGAAAG	1	True	NA	NA	False	AATAAA	-28	NA	112160871	112164257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112161296_112161685_112161776_112162150
transcript_11298.known	chr1	-	616	5	FSM	ENSG00000122218.16	ENST00000541366.1	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_1	89.7621858022631	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGCAAAATAATAAATG	-1	True	NA	-40	True	NA	NA	NA	160343259	160333461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_112980.known	chr5	+	449	3	FSM	ENSG00000250358.7	ENST00000507565.2	754	3	84	221	14	-221	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTATTTTTTGCTTTCC	61	False	NA	NA	False	NA	NA	NA	112628599	112630702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112628611_112629096_112629223_112630390
transcript_112981.known	chr5	+	1098	2	FSM	ENSG00000250358.7	ENST00000513687.2	1098	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGGATGTTTCAAGAGA	126	False	NA	NA	False	AATAAA	-23	NA	112628664	112630930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112629223_112630390
transcript_112987.nic	chr5	+	628	5	NIC	ENSG00000134982.17	novel	524	4	NA	NA	0	8342	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	22.6439837484485	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAGACTGGTATTACG	-11	True	NA	NA	False	AAGAAA	-2	NA	112707497	112775664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_112707650_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_112988.nic	chr5	+	861	5	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	0	8342	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	11.7898261225516	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAGACTGGTATTACG	-11	True	NA	NA	False	AAGAAA	-2	NA	112707497	112775664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_112989.nic	chr5	+	649	5	ISM	ENSG00000134982.17	ENST00000508624.5	7406	17	-132	67091	-132	8342	5prime_fragment	FALSE	canonical	3	9	junction_1	21.7944947177034	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAGACTGGTATTACG	NA	False	NA	NA	False	AAGAAA	-2	NA	112737752	112775664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112737926_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_112992.known	chr5	+	524	4	FSM	ENSG00000134982.17	ENST00000509732.5	524	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	24.9977776790036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAGAGGGTTTGTAAA	-11	True	NA	NA	False	NA	NA	NA	112707497	112767322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112707650_112754872_112755026_112766325_112766411_112767188
transcript_112996.nic	chr5	+	1236	2	ISM	ENSG00000134982.17	ENST00000509732.5	524	4	0	11366	0	-10427	5prime_fragment	FALSE	canonical	2	7	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACTTCCTTTATAAAA	-11	True	NA	NA	False	AATATA	-29	NA	112707497	112755956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112707650_112754872
transcript_112997.nic	chr5	+	1472	2	ISM	ENSG00000134982.17	ENST00000505350.1	573	3	-23	10424	0	-10424	5prime_fragment	FALSE	canonical	3	33	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCCTTTATAAAAAAA	-11	True	NA	NA	False	AATATA	-32	NA	112707497	112755959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112707883_112754872
transcript_113001.known	chr5	-	683	5	FSM	ENSG00000129625.13	ENST00000261482.8	683	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	337.685782199962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCTACCGTGAATTTA	313	False	NA	NA	False	NA	NA	NA	112921997	112878832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_112878836_112887014_112887184_112902379_112902519_112921162_112921257_112921719
transcript_113007.known	chr5	-	3008	5	FSM	ENSG00000129625.13	ENST00000379638.9	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_1	25.7342184649155	3282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATATTTCATTTTATT	29	True	NA	-12	True	AATAAA	-32	NA	112922227	112876384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_112878836_112887014_112887184_112902379_112902519_112921162_112921257_112922072
transcript_113008.known	chr5	+	937	5	FSM	ENSG00000153037.15	ENST00000282999.7	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	305.142077563878	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGGAGAGGAGGGATAAT	-2	True	NA	56	True	AATAAA	-41	NA	112861304	112867935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867371
transcript_113009.known	chr5	+	1850	5	FSM	ENSG00000153037.15	ENST00000391338.3	1850	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	451.858592371552	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGTTTTGTTCTTAAAAA	-2	True	NA	NA	False	AATAGA	-34	NA	112861304	112893079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112891602
transcript_113010.known	chr5	+	1270	4	FSM	ENSG00000153037.15	ENST00000621420.5	1270	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	739.573901348307	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTGTTTGTTTGTTTG	18	True	NA	1	True	AGTAAA	-13	NA	112861324	112868392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864620_112864733_112867403
transcript_113011.known	chr5	-	1139	4	FSM	ENSG00000129625.13	ENST00000513339.5	1139	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	370.338883846794	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAGCTTTATAAAGCAGT	29	True	NA	36	True	NA	NA	NA	112922227	112878084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_112878836_112902379_112902519_112921162_112921257_112922072
transcript_113013.known	chr5	-	857	6	FSM	ENSG00000171444.18	ENST00000506605.6	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	30.261526729496	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCTGCATCCATAATGGT	-2	True	NA	NA	False	NA	NA	NA	113203317	113101733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_113101946_113104191_113104356_113122683_113122827_113143217_113143361_113151308_113151423_113203236
transcript_113015.known	chr5	-	744	2	FSM	ENSG00000171444.18	ENST00000511242.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAGATTTAATGTGCGT	3	False	NA	NA	False	NA	NA	NA	113488823	113448122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_113448288_113488244
transcript_113020.nnic	chr5	+	1999	12	NNC	ENSG00000172795.17	novel	4679	12	NA	NA	22	847	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_11	76.9785845501127	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTCTGCTACTGT	0	True	NA	30	True	AATAAA	-35	NA	112976731	113020970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320_113013393_113020344
transcript_113023.known	chr5	+	4679	12	FSM	ENSG00000172795.17	ENST00000674880.1	4679	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	100.386937347857	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTATCCTATAGAAAAG	15	True	NA	55	True	TATAAA	-9	NA	112976812	113016649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112981041_112981172_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_113024.known	chr5	+	10110	11	FSM	ENSG00000172795.17	ENST00000389063.3	10110	11	0	0	0	0	multi-exon	FALSE	canonical	2	184	junction_10	35.5589651142999	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATATCAAATAACGCAA	0	True	NA	NA	False	AATAAA	-20	NA	112976797	113022195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_113038.nic	chr5	+	1242	9	ISM	ENSG00000172795.17	ENST00000389063.3	10110	11	-96	14190	0	0	5prime_fragment	FALSE	canonical	2	216	junction_2	27.3355880675723	1948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTTCAGCCAGCAAAGC	NA	False	NA	NA	False	AAGAAA	-9	NA	112976701	113008005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937
transcript_113040.known	chr5	+	1572	9	FSM	ENSG00000172795.17	ENST00000513585.6	1572	9	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_1	91.2790193582293	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGTATATTGGAGTTT	-1	True	NA	NA	False	NA	NA	NA	112976709	113013849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_113049.nic	chr5	+	793	5	ISM	ENSG00000172795.17	ENST00000515408.5	8029	10	7	18904	-1	-6770	5prime_fragment	FALSE	canonical	2	216	junction_2	32.0185493112977	1831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAGAGAAATTCGGGTA	-2	True	NA	NA	False	NA	NA	NA	112976708	113001219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083
transcript_113056.nnic	chr5	+	1064	3	NIC	ENSG00000172795.17	novel	852	2	NA	NA	21	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_2	5	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	-1	True	NA	13	True	ATTAAA	-14	NA	112976730	112984651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_112976987_112981041_112981172_112983973
transcript_113062.known	chr5	+	852	2	FSM	ENSG00000172795.17	ENST00000504961.1	852	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	15	True	NA	13	True	ATTAAA	-14	NA	112976812	112984651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112983973
transcript_113063.known	chr5	+	1302	10	FSM	ENSG00000172795.17	ENST00000502635.2	1302	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	111.220279703316	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTTCAGCCAGCAAAGC	-1	True	NA	NA	False	AAGAAA	-9	NA	112976709	113008005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_112993105_112993174_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937
transcript_113064.known	chr5	+	369	2	FSM	ENSG00000172795.17	ENST00000510046.1	369	2	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTCTTGTTAGCAAT	-4	True	NA	NA	False	NA	NA	NA	112976793	112986010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112985834
transcript_113065.known	chr5	+	570	6	FSM	ENSG00000172795.17	ENST00000512751.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	130.533673816376	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAACAAATGGG	61	False	NA	NA	False	AAAACA	-21	NA	112976941	113007989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113007937
transcript_113066.known	chr5	+	6305	30	FSM	ENSG00000047188.16	ENST00000161863.9	6305	30	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	16.071555215325	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCAGATCTTATTTCT	-4	True	NA	15	True	ATTAAA	-16	NA	113513693	113595284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051_113556135_113561079_113561186_113563372_113563493_113563858_113564132_113565892_113566020_113567091_113567298_113567653_113567850_113579585_113579696_113581416_113581710_113584301_113584480_113591040_113591245_113591995_113592179_113593302_113593391_113593481
transcript_113069.known	chr5	+	1457	6	FSM	ENSG00000080709.16	ENST00000503706.5	1457	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.4958584125985	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGGTCACTTGACAT	17	False	NA	8	True	AATAAA	-22	NA	114433529	114496500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_114433930_114463048_114463191_114473053_114473165_114487049_114487178_114493402_114493473_114495894
transcript_11307.known	chr1	+	2822	17	FSM	ENSG00000162736.17	ENST00000294785.10	2822	17	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_8	31.9852871450297	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	-2	True	NA	13	True	ATTAAA	-16	NA	160343382	160358949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160351221_160351373_160351695_160351806_160352053_160352207_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160356755_160357040_160357254_160358148
transcript_113070.known	chr5	-	4156	10	FSM	ENSG00000152503.10	ENST00000513154.6	4156	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	9.46337971105226	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAATTCATGTGTA	-3	True	NA	-25	True	AATAAA	-37	NA	115169908	115124771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115163517_115163753_115169607
transcript_113076.known	chr5	-	693	2	FSM	ENSG00000152503.10	ENST00000379618.6	693	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTCTCGCTACAGCT	26	False	NA	0	True	AATAAA	-26	NA	115180546	115171101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115171223_115179974
transcript_113077.known	chr5	-	1322	2	FSM	ENSG00000152503.10	ENST00000379617.2	1322	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCAAATTAAATTAGCA	26	False	NA	NA	False	NA	NA	NA	115180546	115177122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115177873_115179974
transcript_113079.nnic	chr5	-	2601	10	NNC	ENSG00000164219.10	novel	9550	9	NA	NA	-4	1549	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	91.2847938062354	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGTAAGCTTAATAAC	-12	True	NA	-34	True	AATAAA	-22	NA	115262881	115210852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_115212308_115212419_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_113080.nnic	chr5	-	2536	10	NNC	ENSG00000164219.10	novel	9550	9	NA	NA	-4	1565	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	91.5896646279844	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGATGTTATCCGTCTA	-12	True	NA	-18	True	AATAAA	-38	NA	115262881	115210836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_115212308_115212500_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_113083.known	chr5	-	9550	9	FSM	ENSG00000164219.10	ENST00000419445.6	9550	9	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_5	23.5411873107539	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTCAAATGGATTTC	-8	True	NA	-9	True	AATAAA	-22	NA	115262877	115204011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_113092.known	chr5	+	944	1	FSM	ENSG00000271797.1	ENST00000606615.1	944	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGACTGCTTGCGTCATT	NA	False	NA	NA	False	NA	NA	NA	115262504	115263448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_115262500_115263400
transcript_113093.known	chr5	-	2069	10	FSM	ENSG00000164221.13	ENST00000395557.4	2069	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	50.4720922764792	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAATGTTAGAAACATTAT	9	True	NA	NA	False	AATATA	-40	NA	115296268	115267638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115295909
transcript_113094.known	chr5	-	2387	10	FSM	ENSG00000164221.13	ENST00000379611.10	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	31.927386750114	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGCTAATGCAGTT	-7	True	NA	-5	True	TATAAA	-19	NA	115296654	115267189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_113095.known	chr5	-	2145	9	FSM	ENSG00000164221.13	ENST00000506442.5	2145	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	49.4968433336915	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGTATTTGTTTGAA	NA	False	NA	-54	True	NA	NA	NA	115296693	115267374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115267919_115268881_115269001_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_113098.known	chr5	-	5697	3	FSM	ENSG00000145780.8	ENST00000274457.5	5697	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	6.5	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTATTCTTATTAA	-13	True	NA	-9	True	AATAAA	-18	NA	115544775	115520907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115525618_115542949_115543684_115544522
transcript_113100.known	chr5	-	3918	3	FSM	ENSG00000134970.14	ENST00000456936.4	3918	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_1	29.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTGTATCAGTGTTTT	-24	True	NA	-1	True	AGTAAA	-22	NA	115626036	115613209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115616446_115620434_115620681_115625600
transcript_113105.known	chr5	-	1565	5	FSM	ENSG00000129596.5	ENST00000250535.5	1565	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	24.4987244565916	1064	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGTGTCTTTCTGAT	-1	True	NA	-2	True	AATAAA	-17	NA	115816659	115804732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
transcript_113107.known	chr5	+	1180	7	FSM	ENSG00000177879.17	ENST00000395548.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	513.836117410557	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCAATAATTTTTTTTA	50	True	NA	49	True	NA	NA	NA	115841996	115914011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_115842107_115852978_115853015_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_113109.known	chr5	+	1276	6	FSM	ENSG00000177879.17	ENST00000316788.12	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_4	119.296940446937	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTTAATGTCGATTT	-12	True	NA	4	True	AATAAA	-22	NA	115841934	115914081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_115842107_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_113113.known	chr5	-	732	6	FSM	ENSG00000145782.13	ENST00000513167.1	732	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	347.284897454525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTTAACAGATGTGATC	286	False	NA	NA	False	NA	NA	NA	115841544	115831719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115840817_115840935_115841389
transcript_113128.known	chr5	-	1082	5	FSM	ENSG00000145782.13	ENST00000379594.7	1082	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	353.499911598292	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGCCTCCAAGGTTGA	-7	True	NA	25	True	NA	NA	NA	115841837	115831545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115841389
transcript_113129.known	chr5	-	773	5	FSM	ENSG00000145782.13	ENST00000505993.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	350.012410494257	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACCCATTGCTCCTACT	1	True	NA	-13	True	CATAAA	-15	NA	115841565	115831583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840817_115840935_115841389
transcript_113143.known	chr5	-	4040	4	FSM	ENSG00000145782.13	ENST00000509910.2	4040	4	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_3	46.9420446460905	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCCTGTTCTTGGAG	1	True	NA	NA	False	AATAAA	-17	NA	115841565	115828199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115841389
transcript_113153.known	chr5	-	1430	3	FSM	ENSG00000145782.13	ENST00000500945.2	1430	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	334	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGGCTGCAGAGGCAA	1	True	NA	NA	False	AATAAA	-14	NA	115841565	115830672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115841389
transcript_11316.nic	chr1	+	896	5	ISM	ENSG00000162736.17	ENST00000421914.5	776	7	-89	2773	-19	259	5prime_fragment	FALSE	canonical	3	458	junction_3	7.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGATTATTTTAT	NA	False	NA	NA	False	NA	NA	NA	160343296	160350464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104
transcript_113160.known	chr5	-	373	1	FSM	ENSG00000185641.6	ENST00000469891.2	373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGAATAGGTCCAACCA	7754	False	NA	NA	False	NA	NA	NA	116052289	116051916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_116051900_116052300
transcript_113169.known	chr5	+	869	7	FSM	ENSG00000145781.9	ENST00000515539.5	869	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	272.501987760334	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGAGGTTCTAATATAC	450	False	NA	NA	False	AATAGA	-15	NA	116085473	116292657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116085607_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_113174.known	chr5	+	1433	7	FSM	ENSG00000145781.9	ENST00000632434.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	43.9497819486438	2749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGAAGTGTACATTT	2	True	NA	30	True	AATAAA	-17	NA	116085025	116293286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116085094_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_113175.known	chr5	-	1610	1	FSM	ENSG00000271918.1	ENST00000606662.1	1610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCAGTGGGAGTTGGAT	-17	True	NA	NA	False	ATTAAA	-39	NA	116085416	116083806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_116083800_116085400
transcript_113179.known	chr5	+	482	2	FSM	ENSG00000249167.2	ENST00000508766.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAAATTTTTCAAAAAG	503	False	NA	NA	False	NA	NA	NA	116574481	116591398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116574540_116590974
transcript_113180.known	chr5	+	408	1	FSM	ENSG00000197575.6	ENST00000461663.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTCTGCAATGCTGTA	23	False	NA	NA	False	TATAAA	-22	NA	116716242	116716650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116716200_116716600
transcript_113181.known	chr5	+	617	3	FSM	ENSG00000248663.7	ENST00000504107.2	931	3	314	0	314	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAGCATACATTTACTG	109	False	NA	NA	False	AATAAA	-17	NA	117455262	117479368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_117455455_117471901_117471939_117478980
transcript_113189.known	chr5	-	4365	6	FSM	ENSG00000169570.10	ENST00000304058.8	4365	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	27.9041215593682	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAATGAAACTTTGCAT	312	False	NA	NA	False	AATAAA	-16	NA	118988220	118837321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_118841088_118848089_118848219_118928536_118928730_118939195_118939291_118944558_118944650_118988129
transcript_113191.known	chr5	+	327	1	FSM	ENSG00000197744.5	ENST00000397627.3	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGACAGCAAAAAAGGAAAA	240	False	NA	NA	False	NA	NA	NA	118973795	118974122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_118973800_118974100
transcript_113195.known	chr5	+	1835	13	FSM	ENSG00000172869.15	ENST00000503802.5	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	21.8263347561813	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	49	True	NA	10	True	AATAAA	-19	NA	119071204	119133691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
transcript_11320.known	chr1	+	5354	8	FSM	ENSG00000162738.6	ENST00000368061.3	5354	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	15.9552946877025	1150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCATTCTGTTGCTTT	-22	True	NA	16	True	AATAAA	-16	NA	160400563	160428670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160400870_160415647_160415909_160416061_160416183_160419001_160419610_160420410_160420548_160421051_160421188_160424051_160424284_160425117
transcript_113200.nic	chr5	+	1481	11	ISM	ENSG00000172869.15	ENST00000503802.5	1835	13	-189	4359	-71	0	5prime_fragment	FALSE	canonical	3	34	junction_1	23.1292023208757	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACAGCAACTTAGAAA	NA	False	NA	31	True	AATAAA	-31	NA	119071015	119129332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210
transcript_113206.nic	chr5	+	538	4	ISM	ENSG00000172869.15	ENST00000503802.5	1835	13	-189	31689	-71	-208	5prime_fragment	FALSE	canonical	3	34	junction_1	34.4222150491349	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCAGTAATTTATGAT	NA	False	NA	NA	False	AAGAAA	-3	NA	119071015	119102002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934
transcript_11321.nnic	chr1	-	1460	4	NNC	ENSG00000117091.10	novel	1097	4	NA	NA	25091	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	5.31245915016974	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGAAGTTGTCCCAAAT	NA	False	NA	1	True	AATAAA	-29	NA	160686712	160678745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_160679132_160681201_160681469_160684886_160685190_160686208
transcript_113212.nnic	chr5	-	1412	2	NNC	ENSG00000249494.6	novel	4375	3	NA	NA	-115	-39420	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTATAATATGTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	119071017	119059334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_119060535_119070805
transcript_113214.nnic	chr5	-	400	2	NNC	ENSG00000249494.6	novel	4375	3	NA	NA	-115	-40432	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGACTAAGAAGTTTTTAA	NA	False	NA	NA	False	AATATA	-19	NA	119071017	119060346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_119060535_119070805
transcript_113217.known	chr5	+	795	2	FSM	ENSG00000145779.8	ENST00000274456.6	795	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGACTGATCATGATT	-3	True	NA	NA	False	NA	NA	NA	119268691	119393394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119268908_119392815
transcript_11322.known	chr1	-	1192	8	FSM	ENSG00000179914.5	ENST00000326245.4	1192	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.880630571852711	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGGTGTTTCTGTGAAT	-6	True	NA	NA	False	AATAAA	-15	NA	160885180	160876539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160876817_160879310_160879415_160880587_160880709_160881153_160881313_160881956_160882205_160883427_160883527_160884819_160884884_160885060
transcript_113220.known	chr5	+	711	2	FSM	ENSG00000145779.8	ENST00000504642.1	711	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAGAAGAATTTTCT	522	False	NA	NA	False	NA	NA	NA	119355312	119393446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119355393_119392815
transcript_113221.known	chr5	+	6976	2	FSM	ENSG00000145779.8	ENST00000504771.3	6976	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATTCATGCTGGTT	-1	True	NA	10	True	ATTAAA	-20	NA	119356018	119399688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119356122_119392815
transcript_113223.known	chr5	+	3015	26	FSM	ENSG00000133835.18	ENST00000683371.1	3015	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	426.509111743231	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAAGTCTTTGTGCTCC	-2	True	NA	NA	False	TTTAAA	-5	NA	119452521	119542446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119460058_119460292_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_113225.known	chr5	+	2589	25	FSM	ENSG00000133835.18	ENST00000645832.1	2589	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	358.202512457067	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTGATAGCATTGATA	14	True	NA	26	True	AATAAA	-29	NA	119452537	119542269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_113228.known	chr5	+	2881	25	FSM	ENSG00000133835.18	ENST00000414835.7	2881	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	402.719470875475	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-27	True	NA	23	True	AATAAA	-17	NA	119452496	119542332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_113229.known	chr5	+	2659	25	FSM	ENSG00000133835.18	ENST00000646554.1	2659	25	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	405.554661338436	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGATACCTTTGTTTT	26	True	NA	8	True	AATAAA	-2	NA	119452735	119542317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119477797_119477895_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_11323.known	chr1	-	1161	8	FSM	ENSG00000158764.7	ENST00000368029.4	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	23.932728849926	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	2	True	NA	-5	True	ACTAAA	-17	NA	160954809	160945024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952734_160954386_160954451_160954726
transcript_113231.known	chr5	+	2628	24	FSM	ENSG00000133835.18	ENST00000510025.7	2628	24	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_10	86.899176743595	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-27	True	NA	23	True	AATAAA	-17	NA	119452496	119542332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_113234.known	chr5	+	2551	24	FSM	ENSG00000133835.18	ENST00000643250.1	2551	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	338.115443199592	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	-3	True	NA	23	True	AATAAA	-17	NA	119452752	119542332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477493_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_113238.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000515320.5	2494	23	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	281.797216962133	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTGTTTCCTTAGAAT	-27	True	NA	9	True	AATAAA	-12	NA	119452496	119542252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_113253.known	chr5	+	196	3	FSM	ENSG00000133835.18	ENST00000519184.5	196	3	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_2	64	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGGAGAGGTGGAAAAG	41	False	NA	NA	False	AAGAAA	-2	NA	119452564	119473980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119473907
transcript_113254.known	chr5	+	844	5	FSM	ENSG00000133835.18	ENST00000509606.1	844	5	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_1	89.1487520944629	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	NA	False	NA	23	True	AATAAA	-17	NA	119527157	119542332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_113273.nnic	chr5	+	1466	2	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	-80533	386	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTAGTTGCTTATTT	NA	False	NA	NA	False	AATAAA	-14	NA	120700684	120791164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_120700940_120789953
transcript_113275.nnic	chr5	+	1296	2	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	-79631	391	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGCTTATTTGATTT	NA	False	NA	NA	False	AATAAA	-19	NA	120701586	120791169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_120701667_120789953
transcript_113276.known	chr5	+	1114	2	FSM	ENSG00000248927.1	ENST00000511422.1	1114	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTTTTGCAGGAATCC	NA	False	NA	NA	False	NA	NA	NA	120781217	120790778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_120781507_120789953
transcript_113277.known	chr5	+	561	1	FSM	ENSG00000213661.3	ENST00000466718.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACCCTGGATCCTAC	NA	False	NA	NA	False	NA	NA	NA	121616246	121616807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_121616200_121616800
transcript_113279.known	chr5	+	2855	8	FSM	ENSG00000151304.6	ENST00000339397.5	2855	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	9.40256152680248	398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAATTCAAGGGATTA	-29	True	NA	NA	False	GATAAA	-6	NA	121961974	122028633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087_122020803_122022369_122022408_122026941
transcript_113294.known	chr5	+	3577	11	FSM	ENSG00000064692.20	ENST00000261368.13	3577	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	12.595237195067	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGGATCAGACAAGTAT	-1	True	NA	NA	False	AATAAA	-23	NA	122312236	122464219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122422867_122423740_122425351_122425532_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122463490
transcript_11330.nnic	chr1	-	1048	6	NNC	ENSG00000158764.7	novel	1161	8	NA	NA	-80	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	37.4165738677394	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	3285	False	NA	-5	True	ACTAAA	-17	NA	160951554	160945024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160951406
transcript_113307.known	chr5	+	6479	15	FSM	ENSG00000205302.7	ENST00000379516.7	6479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	261.96799344927	1868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATTGCCTTCTTACTGC	15	True	NA	NA	False	AATAAA	-28	NA	122775079	122834543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122775212_122795265_122795384_122799691_122799856_122801868_122801936_122802080_122802125_122803471_122803614_122808276_122808356_122815895_122815972_122816914_122817029_122817279_122817374_122818817_122819024_122826049_122826194_122827378_122827460_122827574_122827647_122829597
transcript_11331.nic	chr1	-	1316	5	ISM	ENSG00000158764.7	ENST00000368029.4	1161	8	3318	-215	-17	215	3prime_fragment	FALSE	canonical	3	86	junction_4	6.22494979899437	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAAAATAAAAAGACATT	3348	False	NA	NA	False	TATAAA	-5	NA	160951491	160944809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042
transcript_113317.nic	chr5	+	1183	2	ISM	ENSG00000205302.7	ENST00000505854.5	908	6	-90	7628	-74	-7628	5prime_fragment	FALSE	canonical	3	1069	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAGATAAAAAATGA	NA	False	NA	NA	False	AAAAAG	-7	NA	122775004	122796241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_122775212_122795265
transcript_11334.nic	chr1	-	1101	5	ISM	ENSG00000158764.7	ENST00000368029.4	1161	8	3318	0	-17	0	3prime_fragment	FALSE	canonical	3	86	junction_4	6.22494979899437	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	3348	False	NA	-5	True	ACTAAA	-17	NA	160951491	160945024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042
transcript_113343.nnic	chr5	+	2128	8	NNC	ENSG00000064652.11	novel	1987	7	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_2	50.4150123414421	248	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	77	False	NA	14	True	AATAAA	-16	NA	122845569	123009205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_122845694_122866194_122866293_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_113344.known	chr5	+	1050	8	FSM	ENSG00000064652.11	ENST00000395451.8	1050	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56.7259793630209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACTCTTCTCACCGTGA	1	True	NA	NA	False	NA	NA	NA	122845604	123008161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122891026_122891126_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_113348.known	chr5	+	608	8	FSM	ENSG00000064652.11	ENST00000511545.5	608	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.941072296592	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGAAGTCACAGTCAAGG	59	False	NA	NA	False	NA	NA	NA	122845662	123007782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122853673_122853768_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_113350.known	chr5	+	1987	7	FSM	ENSG00000064652.11	ENST00000261369.9	1987	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	20.5406101824329	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	9	True	NA	14	True	AATAAA	-16	NA	122845612	123009205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_113359.known	chr5	+	588	6	FSM	ENSG00000064652.11	ENST00000506996.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	17.2464489098481	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGACACTTAGAATTTT	22	False	NA	5	True	AATAAA	-16	NA	122845625	123002142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939
transcript_113372.known	chr5	+	2424	12	FSM	ENSG00000151292.17	ENST00000361991.6	2424	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	71.6977125400181	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGCACATTAGTCTCT	204	False	NA	23	True	AATAAA	-20	NA	123545633	123615446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123595038_123595135_123604723_123604831_123614341
transcript_113374.known	chr5	+	1115	5	FSM	ENSG00000151292.17	ENST00000515322.2	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	71.1420234460618	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGGTGGTAAAATGAAT	NA	False	NA	NA	False	AAAAAG	-18	NA	123588424	123615017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_123588512_123590409_123590559_123591318_123591415_123604723_123604831_123614341
transcript_113382.nnic	chr5	+	417	2	FSM	ENSG00000289458.1	ENST00000685834.1	356	2	-66	5	-66	-5	multi-exon	FALSE	canonical	3	727	junction_1	0	2061	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCCATGTAATTTTG	NA	False	NA	18	True	AATAAA	-30	NA	124497254	124505105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_124497592_124505025
transcript_113385.known	chr5	-	2605	5	FSM	ENSG00000168916.16	ENST00000509799.5	2605	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	14.2016724367238	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCAAAAAAGCTACCAACT	8	True	NA	NA	False	GATAAA	-6	NA	124748807	124648236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_124649134_124649609_124649698_124701013_124701270_124744083_124745173_124748532
transcript_113386.nnic	chr5	-	1840	4	NIC	ENSG00000168916.16	novel	2605	5	NA	NA	-30	294	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	26.2466929133727	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAGCGAAAGCTAAAGG	-1	True	NA	-48	True	AAAAAG	-6	NA	124748837	124647942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_124649134_124649609_124649698_124701013_124701270_124748532
transcript_113392.nnic	chr5	+	831	3	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTGCGAACCTAAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	124962942	124973249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_124963205_124972527_124972649_124972801
transcript_113394.nnic	chr5	+	755	3	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTGCGAACCTAAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	124962944	124973249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_124963205_124965304_124965352_124972801
transcript_113398.nnic	chr5	-	913	3	Antisense	novelGene_ENSG00000260192.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAGAGGGAGAGAGTA	NA	False	NA	-12	True	AATAAA	-16	NA	124970791	124883685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_124884115_124969787_124969981_124970500
transcript_113401.nnic	chr5	-	664	3	Antisense	novelGene_ENSG00000260192.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGCCAAAAAAGCTTGTA	NA	False	NA	NA	False	AGTAAA	-15	NA	124970720	124883863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_124884115_124969787_124969981_124970500
transcript_113403.nnic	chr5	+	710	2	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTGCGAACCTAAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	124962942	124973249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_124963205_124972801
transcript_113406.known	chr5	+	2905	14	FSM	ENSG00000155324.10	ENST00000285689.8	2905	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.5841234232719	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGACAATG	3	True	NA	NA	False	AAGAAA	-26	NA	126423408	126494364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126423690_126465425_126465546_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_113407.known	chr5	+	1532	13	FSM	ENSG00000155324.10	ENST00000514099.5	1532	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	17.326921891156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGCTGCTTTTGCC	6	True	NA	NA	False	AATAAA	-23	NA	126423471	126493166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126423690_126465425_126465546_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_113416.known	chr5	-	2639	18	FSM	ENSG00000164904.18	ENST00000636808.1	2639	18	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_17	186.541756691684	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCGTCTTTACCAAAAAA	5970	False	NA	NA	False	NA	NA	NA	126595362	126544152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126595006
transcript_113421.known	chr5	-	2332	16	FSM	ENSG00000164904.18	ENST00000636743.1	2332	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	201.802169352947	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCGTCTTTACCAAAAA	-13	True	NA	NA	False	NA	NA	NA	126595219	126544153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126595006
transcript_113423.known	chr5	-	2321	15	FSM	ENSG00000164904.18	ENST00000636886.1	2321	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	208.844598509348	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGGGAGGCTGAGGC	6107	False	126595242	NA	False	AATACA	-40	NA	126595225	126544089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126595006
transcript_113436.known	chr5	-	2037	19	FSM	ENSG00000164904.18	ENST00000458249.6	2037	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	247.140985404418	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTTACAACATAGCCA	6100	False	NA	69	True	ATTAAA	-32	NA	126595232	126544784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126594107_126594268_126595006
transcript_113438.known	chr5	+	3609	5	FSM	ENSG00000164902.14	ENST00000297540.5	3609	5	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_4	64.7649596618418	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	3	True	NA	50	True	AATAAA	-24	NA	126600946	126627252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574
transcript_113439.known	chr5	+	625	2	FSM	ENSG00000164902.14	ENST00000514725.1	625	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAACGACCTGTCAA	-19	True	NA	NA	False	NA	NA	NA	126600924	126604064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126601059_126603573
transcript_113440.known	chr5	+	847	3	FSM	ENSG00000164902.14	ENST00000511371.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_2	12.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATAATGGGACATATAA	7413	False	NA	-22	True	TTTAAA	-13	NA	126608356	126625209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126608485_126617249_126617334_126624574
transcript_113441.known	chr5	+	828	3	FSM	ENSG00000164902.14	ENST00000505674.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_2	66.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATAATGTCCTCACC	2617	False	NA	NA	False	AAAACA	-30	NA	126603560	126617333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126604184_126608363_126608485_126617249
transcript_113442.known	chr5	+	1801	11	FSM	ENSG00000113368.12	ENST00000504788.5	1801	11	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	80.9972839050792	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGGGAGGGTAAATAA	-17	True	NA	NA	False	NA	NA	NA	126777152	126836571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126777245_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_113447.nnic	chr5	-	794	3	Antisense	novelGene_ENSG00000113368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	9.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCACTGCCTCTGGAAT	8753	False	NA	NA	False	AATAAA	-15	NA	126845360	126835115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_126835554_126842741_126842844_126845106
transcript_113451.nnic	chr5	-	693	2	Antisense	novelGene_ENSG00000113368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCACTGCCTCTGGAATCT	8754	False	NA	NA	False	AATAAA	-17	NA	126845359	126835113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_126835554_126845106
transcript_113453.known	chr5	+	1572	6	FSM	ENSG00000113368.12	ENST00000395354.1	1572	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_3	15.8996855314814	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTTTCTTGGTCATTT	19	True	NA	NA	False	AATAAA	-24	NA	126777188	126819234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921
transcript_113457.known	chr5	-	3946	5	FSM	ENSG00000173926.6	ENST00000308660.6	3946	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	9.28372231381357	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTGTCTTTCATTG	5	True	NA	NA	False	AATAAA	-20	NA	127030558	126867713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126870792_126878184_126878395_126914929_126915135_126917983_126918228_127030349
transcript_113463.nnic	chr5	-	1267	4	NIC	ENSG00000173926.6	novel	3946	5	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	24.9977776790036	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTTGTTTCTCAGTTT	2	True	NA	28	True	AAAAAG	-45	NA	127030561	126870190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_126870792_126878184_126878395_126917983_126918228_127030349
transcript_113465.nic	chr5	-	1108	4	NIC	ENSG00000173926.6	novel	764	4	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	26.1321428300262	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTACTCATTATTTC	-6	True	NA	NA	False	AAGAAA	-7	NA	127030614	126898872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_126899267_126914929_126915135_126917983_126918228_127030349
transcript_113469.nic	chr5	-	1659	3	ISM	ENSG00000173926.6	ENST00000308660.6	3946	5	-56	46271	-56	676	5prime_fragment	FALSE	canonical	3	53	junction_2	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGTTGGATATTGG	-6	True	NA	NA	False	NA	NA	NA	127030614	126913984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_126915135_126917983_126918228_127030349
transcript_113470.nic	chr5	-	646	2	ISM	ENSG00000173926.6	ENST00000308660.6	3946	5	-56	50133	-56	-2916	5prime_fragment	FALSE	canonical	3	53	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACACGAGTTCTGTTAT	-6	True	NA	NA	False	NA	NA	NA	127030614	126917846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_126918228_127030349
transcript_113471.known	chr5	-	600	6	FSM	ENSG00000164241.14	ENST00000682830.1	600	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	0.894427190999916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTGACTGATGCCCTC	-3	True	NA	NA	False	AAAACA	-29	NA	127073492	127051779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127051948_127052612_127052670_127056396_127056507_127058881_127059003_127071583_127071686_127073450
transcript_113472.known	chr5	-	2977	6	FSM	ENSG00000164241.14	ENST00000508527.5	2977	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAAGAAAACA	9	True	NA	NA	False	AAGAAA	-41	NA	127073480	127045358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127047916_127052612_127052670_127056396_127056507_127058881_127059003_127071583_127071686_127073450
transcript_113473.known	chr5	-	3017	5	FSM	ENSG00000164241.14	ENST00000535381.6	3017	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGTTGTTTTAAGC	-17	True	NA	NA	False	NA	NA	NA	127073506	127045234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127047916_127052612_127052670_127058881_127059003_127071583_127071686_127073450
transcript_113475.known	chr5	-	635	3	FSM	ENSG00000283897.2	ENST00000640865.1	635	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCCAGCTATTGGGG	NA	False	NA	NA	False	ACTAAA	-37	NA	127229754	127227616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127228154_127228860_127228919_127229714
transcript_113477.known	chr5	-	719	3	FSM	ENSG00000283897.2	ENST00000656996.1	719	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCCAGCTATTGGGG	NA	False	NA	NA	False	ACTAAA	-37	NA	127229828	127227616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127228154_127228850_127228919_127229714
transcript_113480.nic	chr5	-	532	3	ISM	ENSG00000286615.2	ENST00000656856.1	1946	4	-80	32466	-5	23741	5prime_fragment	FALSE	canonical	2	3	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATTTGAATTGGTTTCT	1	True	NA	NA	False	AATAAA	-18	NA	127290736	127264442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_127264719_127282212_127282310_127290577
transcript_113481.nic	chr5	-	523	3	ISM	ENSG00000286615.2	ENST00000652915.1	769	4	-32	31250	-32	23741	5prime_fragment	FALSE	canonical	2	6	junction_2	1	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATTTGAATTGGTTTCT	NA	False	NA	NA	False	AATAAA	-18	NA	127290763	127264442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_127264719_127282212_127282310_127290613
transcript_113482.known	chr5	-	1426	2	FSM	ENSG00000286615.2	ENST00000670868.1	1426	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTTTTTGAAAATCAATA	30	False	NA	NA	False	TATAAA	-17	NA	127290707	127232197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127233530_127290613
transcript_113483.known	chr5	-	1515	3	FSM	ENSG00000286615.2	ENST00000654401.1	1515	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGATTATTTCCTTTT	62	False	NA	NA	False	TATAAA	-5	NA	127290675	127232209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127233530_127282212_127282310_127290577
transcript_113484.nic	chr5	+	1920	5	ISM	ENSG00000145794.17	ENST00000418761.6	2238	15	-222	82874	-171	-75939	5prime_fragment	FALSE	canonical	0	0	junction_2	53.2276948589736	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACGTTGTGAATATTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	127290624	127341730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_127291057_127299995_127300047_127331290_127331425_127339119_127339222_127340529
transcript_113485.nic	chr5	+	1811	4	ISM	ENSG00000145794.17	ENST00000508365.5	2365	14	-163	83051	-113	-75939	5prime_fragment	FALSE	canonical	3	91	junction_1	17.5689119374726	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACGTTGTGAATATTTTT	-3	True	NA	NA	False	AATAAA	-1	NA	127290682	127341730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_127291057_127331290_127331425_127339119_127339222_127340529
transcript_113487.nnic	chr5	+	801	3	NNC	ENSG00000145794.17	novel	2238	15	NA	NA	-113	-108734	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTATTTTGGTTTCTG	-3	True	NA	NA	False	AATAAA	-20	NA	127290682	127308935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_127291057_127299995_127300051_127308563
transcript_113489.known	chr5	+	4664	9	FSM	ENSG00000164244.21	ENST00000296666.13	4664	9	0	0	0	0	multi-exon	TRUE	canonical	3	403	junction_8	35.0348041238994	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGTATAGCGATTTT	-14	True	NA	33	True	AATAAA	-20	NA	127517639	127555085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706
transcript_113495.known	chr5	+	5504	8	FSM	ENSG00000164244.21	ENST00000442138.6	5504	8	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_5	33.1268434219447	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAAATCTATTTACAGC	-3	True	NA	NA	False	AAAAAG	-5	NA	127517650	127552151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818
transcript_113507.known	chr5	-	2654	4	FSM	ENSG00000245937.9	ENST00000499346.7	2654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.0855260988773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	-9	True	NA	NA	False	NA	NA	NA	128083100	127939151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082734
transcript_113513.known	chr5	-	1907	4	FSM	ENSG00000245937.9	ENST00000661296.1	1907	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTAGTGCGCGCAGGCA	2420	False	NA	NA	False	NA	NA	NA	128082161	127939721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128081972
transcript_113517.known	chr5	-	761	4	FSM	ENSG00000245937.9	ENST00000660180.1	761	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.8133634311129	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCACGCCCCCTATCCT	1570	False	NA	NA	False	AAAAAG	-12	NA	128083011	127966767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127966929_128061143_128061245_128081972_128082195_128082734
transcript_113518.known	chr5	-	4007	4	FSM	ENSG00000245937.9	ENST00000664006.1	4007	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGGAAAATAAAGATTTTT	-6	True	NA	NA	False	NA	NA	NA	128083097	128057013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_128060645_128061143_128061245_128076946_128077094_128082969
transcript_113524.nic	chr5	-	1522	3	FSM	ENSG00000245937.9	ENST00000687795.1	1510	3	-17	5	0	0	multi-exon	FALSE	canonical	3	24	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAAGAGCGTGTGTG	-23	True	NA	NA	False	AATAAA	-15	NA	128083114	127965887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127966929_128061143_128061245_128082734
transcript_113525.nic	chr5	-	1288	3	FSM	ENSG00000245937.9	ENST00000689029.1	1292	3	-1	5	-1	0	multi-exon	FALSE	canonical	3	18	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAAGAGCGTGTGTG	-24	True	NA	NA	False	AATAAA	-15	NA	128083115	127965887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127966929_128061143_128061245_128082969
transcript_113528.nic	chr5	-	955	3	FSM	ENSG00000245937.9	ENST00000687795.1	1510	3	-17	572	0	94	multi-exon	FALSE	canonical	3	24	junction_2	1	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTGTGTGACCCGATTT	-23	True	NA	1	True	AATAAA	-21	NA	128083114	127966454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127966929_128061143_128061245_128082734
transcript_113529.nic	chr5	-	721	3	FSM	ENSG00000245937.9	ENST00000689029.1	1292	3	-1	572	-1	94	multi-exon	FALSE	canonical	3	18	junction_2	4	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTGTGTGACCCGATTT	-24	True	NA	1	True	AATAAA	-21	NA	128083115	127966454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127966929_128061143_128061245_128082969
transcript_113531.known	chr5	-	3209	3	FSM	ENSG00000245937.9	ENST00000668567.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAGATTCTTGCAA	1450	False	NA	NA	False	AATACA	-16	NA	128083131	128021587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_128024299_128061143_128061245_128082734
transcript_113532.known	chr5	-	2997	3	FSM	ENSG00000245937.9	ENST00000501702.7	2997	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATAAACTTTAGAAT	-3	True	NA	NA	False	AATGAA	-25	NA	128083094	128021527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_128024299_128061143_128061245_128082969
transcript_113534.known	chr5	-	4027	3	FSM	ENSG00000245937.9	ENST00000654888.1	4027	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGGATTCTACTGAAGA	1409	False	NA	NA	False	CATAAA	-9	NA	128083172	128057156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_128060645_128061143_128061245_128082734
transcript_113537.known	chr5	-	1601	4	FSM	ENSG00000245937.9	ENST00000501652.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	11.5566238822398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAAGAGCGTGTGTG	1607	False	NA	NA	False	AATAAA	-15	NA	128082974	127965887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127966929_128061143_128061245_128081972_128082192_128082734
transcript_113538.nnic	chr5	+	2754	11	NNC	ENSG00000113396.13	novel	2616	11	NA	NA	-176	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	12.1675798744039	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	142	False	NA	15	True	AATAAA	-20	NA	128965311	129033635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_128965693_128965977_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_113539.known	chr5	+	2294	11	FSM	ENSG00000113396.13	ENST00000506176.1	2294	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.6194713553794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATATCTAGAACTT	12	True	NA	NA	False	AATAAA	-8	NA	128965527	129033282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_128965698_128965873_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_113540.known	chr5	+	2863	10	FSM	ENSG00000113396.13	ENST00000262462.9	2863	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	8.01387685344754	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	5	True	NA	15	True	AATAAA	-20	NA	128965487	129033635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_113544.known	chr5	+	1942	5	FSM	ENSG00000066583.12	ENST00000173527.6	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	22.2977016752848	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTGATTGAAATTAT	13	True	NA	7	True	ATTAAA	-15	NA	129094748	129114028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_129095076_129104955_129105076_129105184_129105389_129106945_129107063_129112854
transcript_113553.known	chr5	-	786	2	FSM	ENSG00000249421.2	ENST00000502827.1	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGTAGAGGTGCCTC	355	False	NA	NA	False	NA	NA	NA	129460689	129459558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_129460080_129460424
transcript_113560.known	chr5	-	923	2	FSM	ENSG00000251680.6	ENST00000670057.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTTATTTTTAATTGCC	245	False	NA	NA	False	ACTAAA	-24	NA	129905687	129898694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_129899510_129905579
transcript_113561.nnic	chr5	-	473	3	NNC	ENSG00000287390.1	novel	2582	6	NA	NA	126001	-154626	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATTTTGTTCTCTGAAA	NA	False	NA	NA	False	AATAAA	-15	NA	130818177	130810008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_130810268_130811575_130811693_130818080
transcript_113562.known	chr5	+	532	1	FSM	ENSG00000244192.1	ENST00000498453.1	532	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGTTTCCATCAAAAAGG	16	False	NA	NA	False	NA	NA	NA	130989896	130990428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_130989900_130990400
transcript_113567.known	chr5	-	619	5	FSM	ENSG00000169567.13	ENST00000504202.1	619	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	117.574178712845	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTAATGATTGTTGGCA	2	True	NA	NA	False	AATAAA	-45	NA	131165220	131159603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165059
transcript_113570.known	chr5	-	902	4	FSM	ENSG00000169567.13	ENST00000675135.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2306.58232023052	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTTGCGTTTGA	669	False	NA	-8	True	AATAAA	-26	NA	131164612	131159284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131162571_131162677_131163330_131163493_131164304
transcript_113577.known	chr5	-	3080	3	FSM	ENSG00000169567.13	ENST00000675372.1	3080	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	2295	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGGTACAAATGATAGT	-52	False	NA	NA	False	AATAAA	-2	NA	131165333	131156910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131162571_131162677_131165059
transcript_113579.known	chr5	-	1032	5	FSM	ENSG00000169567.13	ENST00000511475.6	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	2259.67612447005	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTTGCGTTTGA	NA	False	NA	-8	True	AATAAA	-26	NA	131165349	131159284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165094
transcript_113580.known	chr5	-	825	4	FSM	ENSG00000169567.13	ENST00000508495.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2470.64202182348	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGAGTGTTGCGTT	-20	True	NA	-11	True	AATAAA	-23	NA	131165301	131159287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131160655_131160845_131162571_131162677_131165094
transcript_113581.known	chr5	-	1070	4	FSM	ENSG00000169567.13	ENST00000508488.2	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2460.86177317351	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTCTCTCTGAGTGTTG	-44	True	NA	-15	True	AATAAA	-19	NA	131165325	131159291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131162063_131162478_131162571_131162677_131165094
transcript_113582.known	chr5	+	6219	5	FSM	ENSG00000186687.16	ENST00000379380.9	6219	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	4.5	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGTGATAGTATTGT	-28	True	NA	25	True	AATAAA	-25	NA	131170943	131205428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131187027_131187110_131199530
transcript_113587.known	chr5	+	3485	5	FSM	ENSG00000158985.14	ENST00000395246.5	3485	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	177.49700701702	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTGTTTAGTTTTTCT	-7	True	NA	53	True	AATAAA	-34	NA	131264008	131394687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_131264167_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_113588.known	chr5	+	3591	6	FSM	ENSG00000158985.14	ENST00000360515.7	3591	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	127.313785585065	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTAGTTTTTCTTTT	-1	True	NA	56	True	AATAAA	-37	NA	131264074	131394690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_113591.nic	chr5	-	1258	6	ISM	ENSG00000158987.22	ENST00000510071.5	3107	18	-26	83896	-26	585	5prime_fragment	FALSE	canonical	3	32	junction_2	9.64157663455516	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGCTGTGTCTTCAAA	-44	True	NA	NA	False	NA	NA	NA	131635257	131547510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131634961
transcript_113593.nic	chr5	-	1187	5	NIC	ENSG00000158987.22	novel	3107	18	NA	NA	-26	584	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	22.576259654779	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGCTGTGTCTTCAA	-44	True	NA	NA	False	NA	NA	NA	131635257	131547511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_131548191_131592382_131592467_131603270_131603328_131604622_131604694_131634961
transcript_113594.nic	chr5	-	1030	4	ISM	ENSG00000158987.22	ENST00000510071.5	3107	18	-26	128246	-26	-43765	5prime_fragment	FALSE	canonical	3	39	junction_3	7.93025150224688	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTATGTACGATTTG	-44	True	NA	NA	False	AAGAAA	-7	NA	131635257	131591860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_131592467_131603270_131603328_131604622_131604694_131634961
transcript_113595.known	chr5	-	6393	29	FSM	ENSG00000273217.1	ENST00000514667.1	6393	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	12.6553610483979	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCAAAGCCATTAACG	12	True	NA	NA	False	AATAAA	-32	NA	131796983	131425890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131427292_131428901_131429217_131430858_131431350_131433429_131433659_131439580_131439716_131442348_131442538_131446482_131446704_131453053_131453178_131455800_131456013_131461704_131462089_131464040_131464282_131472586_131472745_131479512_131479754_131489545_131489655_131492581_131492786_131495552_131495661_131498442_131498608_131504625_131504779_131505363_131505523_131508070_131508208_131510313_131510492_131521389_131521522_131548046_131548191_131561977_131562048_131592382_131592467_131603270_131603328_131604622_131604694_131744563_131744691_131796829
transcript_113597.known	chr5	-	1720	13	FSM	ENSG00000217128.13	ENST00000511848.1	1720	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.8541390362025	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAAGCATCTCTGCTTT	19	False	131797035	NA	False	AATAAA	-23	NA	131797016	131677596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_113599.nnic	chr5	-	1126	7	NNC	ENSG00000217128.13	novel	6388	17	NA	NA	-3	-37992	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	14.9666295470958	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAATCTCTTTTCTTT	15	False	131797035	NA	False	AATAAA	-21	NA	131797020	131715588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_131715994_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_113601.nic	chr5	-	1697	6	ISM	ENSG00000217128.13	ENST00000511848.1	1720	13	-4	37992	-3	-37992	5prime_fragment	FALSE	canonical	3	27	junction_4	7.26636084983398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAATCTCTTTTCTTT	15	False	131797035	NA	False	AATAAA	-21	NA	131797020	131715588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_113603.nic	chr5	-	1608	3	ISM	ENSG00000217128.13	ENST00000511848.1	1720	13	-4	52152	-3	-52152	5prime_fragment	FALSE	canonical	3	27	junction_1	11	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTAGCTGTGTGTGGTG	15	False	131797035	NA	False	AAAAAG	-7	NA	131797020	131729748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_131731039_131744563_131744691_131796829
transcript_113607.known	chr5	-	2230	16	FSM	ENSG00000072682.20	ENST00000166534.8	2230	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_15	23.7627158941622	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-15	True	NA	-8	True	AATAAA	-24	NA	132227857	132192609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_113610.known	chr5	-	2625	16	FSM	ENSG00000072682.20	ENST00000379100.7	2625	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	26.4042084187772	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCCTTACTTGGAGTA	7	True	NA	-11	True	AATAAA	-21	NA	132227835	132192612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132226696_132227259_132227789
transcript_113611.nic	chr5	-	2256	16	NIC	ENSG00000072682.20	novel	2223	16	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_15	20.572473518434	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	NA	False	NA	-8	True	AATAAA	-24	NA	132227889	132192609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_113612.known	chr5	-	2223	16	FSM	ENSG00000072682.20	ENST00000379086.5	2223	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	22.7091758253501	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	23	True	NA	-8	True	AATAAA	-24	NA	132227819	132192609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227259_132227789
transcript_113613.known	chr5	-	4553	15	FSM	ENSG00000072682.20	ENST00000379104.7	4553	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	20.1757583374156	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-11	True	NA	-2	True	ATTAAA	-16	NA	132227853	132190146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_113614.known	chr5	-	4547	15	FSM	ENSG00000072682.20	ENST00000360568.8	4547	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	15.1415093739841	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATTGTCTGTTTCTTCTGT	-11	True	NA	-2	True	ATTAAA	-16	NA	132227853	132190146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227789
transcript_113618.known	chr5	+	1006	6	FSM	ENSG00000131435.13	ENST00000379018.7	1006	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	76.8765243751303	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACCTGGCCTGCCAC	18	False	NA	31	True	AATAAA	-22	NA	132257706	132272332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132272024
transcript_113619.known	chr5	+	2257	7	FSM	ENSG00000131435.13	ENST00000253754.8	2257	7	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_5	12.3917535302941	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTCTCTGATTACC	7	True	NA	NA	False	AGTAAA	-23	NA	132257695	132273454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132271790_132271909_132272024
transcript_113620.known	chr5	-	733	2	FSM	ENSG00000233006.8	ENST00000457998.2	733	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGTATGATAGAAGAAAG	-14	True	NA	NA	False	NA	NA	NA	132369648	132366280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132366782_132369416
transcript_113628.known	chr5	-	3554	10	FSM	ENSG00000125347.15	ENST00000245414.9	3554	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.51494009523069	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCAGTGGTTACCA	20	True	NA	NA	False	AATAAA	-18	NA	132490773	132481608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
transcript_113630.known	chr5	+	942	4	FSM	ENSG00000197536.11	ENST00000378953.8	942	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTATCTCCAGTACTG	NA	False	NA	NA	False	AATAAA	-21	NA	132410635	132476044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132411042_132419822_132419941_132449649_132449690_132475666
transcript_113634.known	chr5	+	8272	25	FSM	ENSG00000113522.14	ENST00000378823.8	8272	25	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	18.8900326451103	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTTTCTCCCAGAACT	12	True	NA	34	True	AATAAA	-26	NA	132556976	132646349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002_132616131_132618069_132618295_132637114_132637201_132638080_132638224_132640671_132640806_132642177
transcript_113635.known	chr5	+	4373	25	FSM	ENSG00000113522.14	ENST00000533482.5	4373	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	37.8417529177612	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTAGGATTTTGG	-27	True	NA	8	True	AATATA	-15	NA	132556937	132642476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132557454_132559283_132559368_132575776_132575864_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002_132616131_132618069_132618295_132637114_132637201_132638080_132638224_132640671_132640806_132642177
transcript_113636.known	chr5	-	6325	17	FSM	ENSG00000131437.16	ENST00000378746.8	6325	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	9.38894795757224	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTAGTGGTCTGCTGC	NA	False	NA	-4	True	AATAAA	-18	NA	132737638	132692627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132696683_132699170_132699296_132700215_132700285_132700646_132700701_132702086_132702213_132702557_132702669_132702884_132703066_132703462_132703620_132710958_132711058_132715756_132715932_132716244_132716443_132716844_132716985_132720608_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_113642.nic	chr5	-	1913	5	ISM	ENSG00000131437.16	ENST00000618515.4	3333	19	-44	23877	22	6619	5prime_fragment	FALSE	canonical	3	39	junction_2	4.33012701892219	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAGAGGGATTAGAG	NA	False	NA	NA	False	NA	NA	NA	132737616	132719508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_132720715_132726127_132726213_132726353_132726499_132734204_132734479_132737413
transcript_113645.known	chr5	+	258	2	FSM	ENSG00000164405.11	ENST00000496429.1	258	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTTGTGAGTAGAAT	-5	True	NA	25	True	AATAAA	-29	NA	132866641	132867699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132866688_132867487
transcript_113646.known	chr5	+	586	2	FSM	ENSG00000164405.11	ENST00000378665.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	5784	junction_1	0	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTGTTGTGATATTACA	-1	True	NA	9	True	AATAAA	-13	NA	132866645	132867683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132867036_132867487
transcript_113647.known	chr5	+	1573	3	FSM	ENSG00000164405.11	ENST00000378670.8	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	4444	junction_1	670	13497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAAATTATCTTTTTG	-5	True	NA	NA	False	AATAAA	-19	NA	132866641	132868847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132866688_132866868_132867036_132867487
transcript_113649.nnic	chr5	+	817	4	Fusion	ENSG00000164406.8_ENSG00000164405.11	novel	1573	3	NA	NA	212	0	multi-exon	FALSE	canonical	3	5	junction_2	2720.24864059642	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGCAGTCTGGAATTCA	222	False	NA	5	True	ATTAAA	-16	NA	132866868	132874698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_+_132867036_132867487_132867709_132873949_132874090_132874409
transcript_113659.known	chr5	-	2178	4	FSM	ENSG00000155329.12	ENST00000324170.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	40.4310112001501	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	NA	False	NA	-4	True	AATAAA	-29	NA	133026604	132996984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133026496
transcript_113660.known	chr5	-	2160	5	FSM	ENSG00000155329.12	ENST00000355372.6	2160	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	134.165010341743	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTTAAACTTCTGTTA	6	True	NA	-15	True	AATAAA	-18	NA	133026549	132996995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132998833_133000131_133000174_133006758_133006921_133022840_133022907_133026496
transcript_113661.known	chr5	-	325	3	FSM	ENSG00000155329.12	ENST00000504170.2	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	39.5	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGGTGGATATTTT	NA	False	NA	-5	True	AATAAA	-13	NA	133026589	133019037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133019204_133022840_133022907_133026496
transcript_113662.known	chr5	-	829	1	FSM	ENSG00000286408.1	ENST00000665702.1	829	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGATTTGTCGTTT	NA	False	NA	2	True	NA	NA	NA	133051893	133051064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133051100_133051900
transcript_113667.known	chr5	+	4774	19	FSM	ENSG00000170606.16	ENST00000304858.7	4774	19	0	0	0	0	multi-exon	FALSE	canonical	3	1255	junction_6	135.979119675244	4205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCCTTAATTCCATAA	-27	True	NA	31	True	AATAAA	-23	NA	133052012	133106449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096251_133097160_133097287_133099544_133099653_133101758_133101879_133103864_133104027_133104232
transcript_113678.known	chr5	+	203	1	FSM	ENSG00000279691.1	ENST00000623366.1	203	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAATCGCTTTTGTT	729	False	NA	7	True	AATAAA	-19	NA	133052768	133052971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_133052800_133053000
transcript_113679.known	chr5	+	2358	21	NNC	ENSG00000170606.16	novel	4774	19	NA	NA	115	-528	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	541.430630367363	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAATCTGCAGAACAAG	88	False	NA	48	True	AAAAAG	-33	NA	133052127	133103949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096146_133096150_133096205_133096205_133096251_133097160_133097287_133099544_133099653_133101758_133101810_133101810_133101879_133103864
transcript_113688.known	chr5	-	2188	3	FSM	ENSG00000113583.8	ENST00000231512.5	2188	3	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	47	792	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	-17	True	NA	-10	True	AATAAA	-20	NA	133968625	133955509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133956991_133959493_133960021_133968445
transcript_113694.known	chr5	-	1807	9	FSM	ENSG00000213585.11	ENST00000395044.7	1807	9	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_8	452.177353894465	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTCTGTTGTCTTTA	-27	True	NA	-6	True	AATAAA	-15	NA	134004742	133971914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993016_134004646
transcript_113696.known	chr5	-	1839	9	FSM	ENSG00000213585.11	ENST00000265333.8	1839	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_8	640.418405712234	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTAGATTTATTTT	-23	True	NA	-15	True	AATAAA	-17	NA	134004975	133971870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004894
transcript_113701.known	chr5	-	1873	9	FSM	ENSG00000213585.11	ENST00000395047.6	1873	9	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_8	220.653574636805	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACTTAAAAAACTTGAAT	506	False	NA	-43	True	NA	NA	NA	134004842	133971951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004646
transcript_113702.known	chr5	+	416	1	FSM	ENSG00000271737.1	ENST00000606089.1	416	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCGAGGTCCCTGCTGG	255	False	NA	16	True	AATAAA	-18	NA	134005146	134005562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134005100_134005600
transcript_113709.nic	chr5	-	910	4	ISM	ENSG00000273345.5	ENST00000518409.1	1082	7	-8	101925	-8	-101925	5prime_fragment	FALSE	canonical	1	2	junction_2	8.52447456836295	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTATTTTTGAAGAGA	-15	False	NA	NA	False	ATTAAA	-21	NA	134371052	134307878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_134308467_134308573_134308728_134321790_134321904_134370997
transcript_113734.known	chr5	-	4582	7	FSM	ENSG00000113575.10	ENST00000481195.6	4582	7	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_1	130.460296216469	3394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTTGACATATTTCT	7	True	NA	-14	True	ATTAAA	-16	NA	134226073	134194331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134197845_134199085_134199205_134200334_134200497_134200984_134201075_134201847_134202022_134205921_134206132_134225759
transcript_113735.known	chr5	-	9386	6	FSM	ENSG00000113558.19	ENST00000353411.11	9386	6	0	0	0	0	multi-exon	FALSE	canonical	3	6980	junction_4	279.828233028764	9341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTTTTAAAAAGTGG	2	True	NA	-11	True	AATAAA	-37	NA	134176950	134148934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_113736.known	chr5	-	899	6	FSM	ENSG00000113558.19	ENST00000521216.5	899	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2965.48205862049	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTGTAAATAAAACAACT	336	False	NA	-33	True	TTTAAA	-6	NA	134176920	134157391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158629_134161019_134161131_134167169_134167244_134173925_134174023_134176854
transcript_113737.known	chr5	-	1683	5	FSM	ENSG00000113558.19	ENST00000522552.5	1683	5	0	0	0	0	multi-exon	FALSE	canonical	3	6980	junction_3	312.846907448356	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTTTATTCATGAGT	8	True	NA	21	True	AATAAA	-41	NA	134176964	134157337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_113738.known	chr5	-	876	7	FSM	ENSG00000113558.19	ENST00000517625.5	876	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3397.00959996027	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAACTGAACTGTGGGT	537	False	NA	10	True	NA	NA	NA	134176719	134157507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134174461_134174515_134176613
transcript_113739.known	chr5	-	802	7	FSM	ENSG00000113558.19	ENST00000522855.5	802	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	3387.80796468093	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCAAACCTTACGGCCA	2	True	NA	-54	True	NA	NA	NA	134176950	134157571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134174461_134174515_134176854
transcript_113740.known	chr5	-	899	7	FSM	ENSG00000113558.19	ENST00000523966.5	899	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3500.39018856787	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAACTGAACTGTGG	2	True	NA	8	True	NA	NA	NA	134176950	134157509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134170950_134171039_134173925_134174023_134176854
transcript_113741.known	chr5	+	1418	1	FSM	ENSG00000270177.1	ENST00000602919.1	1418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTCTTTACCGTTGCC	-6	True	NA	NA	False	TATAAA	-24	NA	134226409	134227827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134226400_134227800
transcript_113756.nic	chr5	-	980	5	ISM	ENSG00000006837.12	ENST00000519312.5	1198	9	0	21441	0	122	5prime_fragment	TRUE	canonical	1	3	junction_1	5.85234995535981	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTATTTTTGAAGAGA	-10	True	NA	NA	False	ATTAAA	-21	NA	134371047	134307878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_134308467_134312291_134312381_134319357_134319498_134321790_134321904_134370997
transcript_113758.nic	chr5	-	855	5	ISM	ENSG00000006837.12	ENST00000519312.5	1198	9	3	21563	-1	0	5prime_fragment	FALSE	canonical	1	3	junction_1	5.85234995535981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	-7	True	NA	-3	True	ATTAAA	-17	NA	134371044	134308000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_134308467_134312291_134312381_134319357_134319498_134321790_134321904_134370997
transcript_113763.nnic	chr5	-	951	4	NIC	ENSG00000006837.12	novel	1198	9	NA	NA	-60	122	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	6.68331255192114	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTATTTTTGAAGAGA	NA	False	NA	NA	False	ATTAAA	-21	NA	134371107	134307878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_134308467_134319357_134319498_134321790_134321904_134370997
transcript_113767.nnic	chr5	-	763	4	NIC	ENSG00000006837.12	novel	1198	9	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	6.68331255192114	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACTGAGTGTTTCTTA	-6	True	NA	-5	True	ATTAAA	-15	NA	134371043	134308002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_134308467_134319357_134319498_134321790_134321904_134370997
transcript_113768.known	chr5	-	586	3	FSM	ENSG00000006837.12	ENST00000521755.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	33	False	NA	-3	True	ATTAAA	-17	NA	134371004	134308000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134308467_134321790_134321904_134370997
transcript_113774.known	chr5	-	2222	13	FSM	ENSG00000006837.12	ENST00000265334.9	2222	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	6.14353770685552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTTTTTGCCATGAT	0	True	NA	NA	False	TATAAA	-20	NA	134367171	134298423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134298711_134302589_134302688_134304404_134304568_134306608_134306703_134308137_134308467_134308573_134308728_134312291_134312381_134319357_134319498_134321790_134321904_134350248_134350428_134359896_134360092_134366358_134366545_134366976
transcript_113775.known	chr5	+	644	6	FSM	ENSG00000119048.8	ENST00000507277.1	644	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	90.2055430669313	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTGTATTTTTTTCC	33	False	NA	5	True	CATAAA	-12	NA	134371603	134390573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388351_134388414_134390224
transcript_113776.known	chr5	+	235	2	FSM	ENSG00000119048.8	ENST00000504431.1	235	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGATAAATTAGAAAAAAA	35	False	NA	NA	False	ACTAAA	-5	NA	134371605	134374583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134371640_134374382
transcript_113781.known	chr5	-	800	2	FSM	ENSG00000237190.4	ENST00000395009.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTATCTGAGAATATCT	-4	True	NA	-6	True	AATAAA	-17	NA	134411881	134410548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134411083_134411615
transcript_113782.known	chr5	-	1228	3	FSM	ENSG00000237190.4	ENST00000458198.3	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_1	18.5	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCAGGTAATTAATTT	-4	True	NA	-58	True	AATAAA	-38	NA	134411881	134402064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134402927_134409902_134410003_134411615
transcript_113787.known	chr5	+	1107	2	FSM	ENSG00000251169.2	ENST00000515627.2	1107	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGATGTGCCATCTA	37	False	NA	NA	False	AATAAA	-31	NA	134506551	134509229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134506835_134508405
transcript_113789.known	chr5	+	2573	12	FSM	ENSG00000043143.22	ENST00000512386.6	2573	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	35.1786467915218	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACCCCCTTCCCTGTCCC	3	True	NA	NA	False	NA	NA	NA	134526218	134579317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_113792.known	chr5	+	3212	11	FSM	ENSG00000043143.22	ENST00000361895.6	3212	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	28.9006920332369	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCACTGTCACAAGCACAAC	0	True	NA	3	True	AATAAA	-21	NA	134525672	134579814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134578493
transcript_113797.known	chr5	+	3611	10	FSM	ENSG00000043143.22	ENST00000681820.1	3611	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	30.8608985891272	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGTCTCTACAAAAAA	56	False	NA	NA	False	NA	NA	NA	134526175	134575710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644
transcript_113798.known	chr5	+	6389	23	FSM	ENSG00000113615.13	ENST00000398844.7	6389	23	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_18	21.4001621991227	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTGACTAGTTATTT	-13	True	NA	17	True	AATAAA	-20	NA	134648784	134727909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693726_134693934_134697125_134697247_134697898_134698058_134703758_134703933_134705326_134705438_134708712_134708889_134715023_134715162_134718068_134718174_134720997_134721091_134723566_134723671_134724979
transcript_113800.known	chr5	+	2700	13	FSM	ENSG00000113615.13	ENST00000322887.8	2700	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	34.7302101922807	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTTTCTTGCTTTGT	26	False	NA	5	True	AATAAA	-16	NA	134648823	134693698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693030
transcript_113803.known	chr5	-	929	8	FSM	ENSG00000152700.14	ENST00000439578.5	929	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	90.5520483997339	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTGAAAACTGATTC	31	True	NA	-15	True	ATTAAA	-16	NA	134632774	134606801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632076_134632196_134632727
transcript_113806.known	chr5	-	6517	7	FSM	ENSG00000152700.14	ENST00000402673.7	6517	7	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	15.140086598901	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTGTCAAGTTCCATT	14	False	134632842	-3	True	AATAAA	-23	NA	134632828	134601148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632727
transcript_113813.known	chr5	-	506	5	FSM	ENSG00000152700.14	ENST00000509730.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	80.3336791140553	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCTTCCGCTGGATGG	NA	False	NA	NA	False	NA	NA	NA	134613137	134606986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134613013
transcript_113816.known	chr5	-	676	2	FSM	ENSG00000152700.14	ENST00000504242.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGTTCTTACATCAG	-4	True	NA	NA	False	ATTAAA	-15	NA	134632809	134631601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134632196_134632727
transcript_113819.known	chr5	+	895	3	FSM	ENSG00000164615.6	ENST00000514518.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	80	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	31	False	NA	15	True	AATAAA	-16	NA	134738582	134751377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134738793_134743986_134744053_134750758
transcript_113821.known	chr5	+	2171	4	FSM	ENSG00000164615.6	ENST00000297156.4	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	16.2138486760204	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTAAGTCTTGATT	-4	True	NA	NA	False	ATTAAA	-23	NA	134738547	134752157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134738793_134741062_134741524_134743986_134744053_134750758
transcript_113832.known	chr5	+	3821	23	FSM	ENSG00000145833.16	ENST00000354283.8	3821	23	0	0	0	0	multi-exon	FALSE	canonical	2	256	junction_19	106.646603011462	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATTTTTTTGCATTTC	18	False	NA	13	True	AGTAAA	-13	NA	134758803	134829296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816604_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_11384.nnic	chr1	-	572	4	NNC	ENSG00000215845.11	novel	567	4	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_3	546.083225240337	748	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	9884	False	NA	-15	True	AATAAA	-16	NA	161039008	161037630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_161037827_161037912_161038076_161038550_161038635_161038879
transcript_11385.known	chr1	-	574	4	FSM	ENSG00000215845.11	ENST00000368023.7	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	579.921259022867	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	5	True	NA	-15	True	AATAAA	-16	NA	161038950	161037630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912_161038076_161038550_161038695_161038879
transcript_113850.nic	chr5	+	739	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-108	55552	-75	-4150	5prime_fragment	FALSE	canonical	3	567	junction_4	60.8620366073959	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAGAAAAATGGCGAGAA	NA	False	NA	24	True	AAGAAA	-19	NA	134758695	134773744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_113854.nic	chr5	+	648	4	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-108	58339	-75	-6937	5prime_fragment	FALSE	canonical	3	595	junction_1	56.9580742495936	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAGATGACAAGGAGGA	NA	False	NA	-11	True	AAGAAA	-4	NA	134758695	134770957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902
transcript_113860.known	chr5	+	2923	3	FSM	ENSG00000181904.9	ENST00000504727.1	2923	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	33	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTATGTTTACTATGTT	16	False	NA	26	True	AATAAA	-16	NA	134846095	134859732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134846213_134854897_134855328_134857356
transcript_113861.known	chr5	+	5083	2	FSM	ENSG00000181904.9	ENST00000394976.4	5083	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTTTACTATGTTTTT	-12	True	NA	29	True	AATAAA	-19	NA	134845967	134859735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134846213_134854897
transcript_113864.known	chr5	+	643	2	FSM	ENSG00000181904.9	ENST00000508791.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCCAGCTTTCTGTGGG	166	False	NA	NA	False	NA	NA	NA	134846245	134854922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134846864_134854897
transcript_113865.known	chr5	+	5674	23	FSM	ENSG00000145833.16	ENST00000452510.7	5674	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	150.081004298478	2943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCACTTTCTTAAAATTA	-7	True	NA	9	True	AATAAA	-17	NA	134758778	134831121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816607_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_113868.known	chr5	+	1006	4	FSM	ENSG00000113621.15	ENST00000511070.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	59.4100627466051	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTTAAGGAAACCCTTG	-12	True	NA	NA	False	NA	NA	NA	134874370	134900039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134874531_134893491_134893656_134896293_134896425_134899488
transcript_113869.known	chr5	+	3090	5	FSM	ENSG00000113621.15	ENST00000358387.9	3090	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	15.0166574176812	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGCCTGTAATCCCAG	-12	True	NA	5	True	AATAAA	-17	NA	134874370	134901635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488
transcript_113870.known	chr5	+	2893	5	FSM	ENSG00000113621.15	ENST00000507024.5	2893	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.0360879108852	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGAGTCCACCTCTT	14	True	NA	15	True	TATAAA	-18	NA	134874396	134901511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134874484_134887694_134888183_134893491_134893656_134896293_134896425_134899488
transcript_113871.known	chr5	+	517	2	FSM	ENSG00000113621.15	ENST00000506916.1	517	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCCCCGACAGAGGACTC	-7	True	NA	NA	False	NA	NA	NA	134874375	134888062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134874531_134887700
transcript_113878.known	chr5	+	2365	4	FSM	ENSG00000132570.15	ENST00000254908.11	2365	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	4.92160768674447	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCTATCTTGGTGTGT	-1	True	NA	24	True	ATTAAA	-17	NA	134905130	134962644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585
transcript_113881.known	chr5	+	5621	5	FSM	ENSG00000132570.15	ENST00000512783.5	5621	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	49.6909196936422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACACTTTGTTTTGCTG	-12	True	NA	7	True	AATAAA	-20	NA	134905119	134969660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585_134960699_134964469
transcript_113882.known	chr5	+	457	1	FSM	ENSG00000279799.1	ENST00000623591.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGACTTTTCTTTCCTTT	51	False	NA	8	True	AATAAA	-19	NA	134905234	134905691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134905200_134905700
transcript_113888.known	chr5	-	843	2	FSM	ENSG00000249082.2	ENST00000507035.2	843	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTTGACGCAGGGT	NA	False	NA	NA	False	AATAAA	-25	NA	135040047	135038830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135039222_135039595
transcript_113891.known	chr5	-	1881	9	FSM	ENSG00000113648.17	ENST00000304332.8	1881	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	310.593761004628	4073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGACTGGTGTGTTC	-1	True	NA	-9	True	AGTAAA	-12	NA	135399887	135334382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399748
transcript_113894.known	chr5	-	1314	9	FSM	ENSG00000113648.17	ENST00000510038.1	1314	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	320.397385093886	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTCACTCCTACTGGG	2	True	NA	NA	False	AAGAAA	-8	NA	135399884	135334912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399785
transcript_113907.known	chr5	-	1859	9	FSM	ENSG00000113648.17	ENST00000312469.8	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	404.788660136373	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	780	False	NA	-1	True	NA	NA	NA	135399211	135334409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135350822_135350914_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_113908.known	chr5	-	775	5	FSM	ENSG00000113648.17	ENST00000513210.5	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	397.399043783449	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATCTGTGTTTAGTTTG	NA	False	NA	-5	True	ATTAAA	-22	NA	135389059	135359721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135359943_135360496_135360608_135369405_135369604_135370035_135370143_135388921
transcript_113909.known	chr5	+	1464	8	FSM	ENSG00000145832.15	ENST00000433282.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	6.71276578541185	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACATTGTTTCTCTGT	40	False	NA	3	True	AATAAA	-14	NA	135834713	135883448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879967_135880098_135883061
transcript_11391.known	chr1	-	567	4	FSM	ENSG00000215845.11	ENST00000423014.3	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_3	212.675548403875	5684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-9	True	NA	-15	True	AATAAA	-16	NA	161038964	161037630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912_161038076_161038550_161038674_161038879
transcript_113913.nnic	chr5	+	1398	7	NIC	ENSG00000145832.15	novel	1464	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_5	8.02945964696394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACATTGTTTCTCTGT	-28	True	NA	3	True	AATAAA	-14	NA	135834645	135883448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135879967_135880098_135883061
transcript_113916.nnic	chr5	+	1140	6	NIC	ENSG00000145832.15	novel	1464	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	8.26075057122535	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACATTGTTTCTCTGT	-28	True	NA	3	True	AATAAA	-14	NA	135834645	135883448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135879967_135880098_135883061
transcript_113918.nnic	chr5	+	1012	5	NIC	ENSG00000145832.15	novel	1464	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	8.5146931829632	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATTGTTTCTCTGTCA	-28	True	NA	5	True	AATAAA	-16	NA	135834645	135883450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135883061
transcript_113919.known	chr5	+	1148	5	FSM	ENSG00000145832.15	ENST00000412661.3	1148	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	6.89202437604511	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTGAGATTTTTTTCA	53	False	NA	NA	False	AATAAA	-26	NA	135834726	135888637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135888031
transcript_11392.known	chr1	-	4639	10	FSM	ENSG00000158769.18	ENST00000368026.11	4639	10	0	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_3	109.914557163932	1389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCAGCTTATTACCC	-7	True	NA	-7	True	ATTAAA	-18	NA	161021152	160995210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160998907_160999042_160999092_160999395_160999409_160999639_160999748_160999875_160999979_161000145_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009
transcript_113921.nic	chr5	+	779	4	ISM	ENSG00000145832.15	ENST00000274513.9	1880	5	29	19711	-9	-18589	5prime_fragment	FALSE	canonical	3	18	junction_1	3.09120616516523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCCCAGTGCATTTAA	31	True	NA	NA	False	AATAAA	-17	NA	135834704	135853036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562
transcript_113924.known	chr5	+	2712	17	FSM	ENSG00000120708.17	ENST00000442011.7	2712	17	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	3.7243917288599	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTGTGTGCATGGTACA	-2	True	NA	NA	False	AATAAA	-15	NA	136028987	136063818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136029190_136033762_136033862_136044057_136044123_136046334_136046496_136046850_136047016_136047273_136047421_136049438_136049581_136052906_136053120_136053942_136054081_136054715_136054862_136055679_136055817_136056664_136056796_136059089_136059215_136060833_136060937_136061499_136061580_136062662_136062688_136063185
transcript_113925.known	chr5	-	128	1	FSM	ENSG00000270123.4	ENST00000602301.2	128	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAAGGCTTTGTTATTT	NA	False	NA	-21	True	AATAAA	-18	NA	136080597	136080469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_136080500_136080600
transcript_113928.known	chr5	+	7013	8	FSM	ENSG00000113658.18	ENST00000545279.6	7013	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	50.7555164389014	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	-35	True	NA	19	True	AATAAA	-13	NA	136132844	136182733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_11393.known	chr1	-	813	7	FSM	ENSG00000270149.5	ENST00000470694.1	813	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	659.225555734404	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTATGGGGTGGTGGTG	-7	True	NA	NA	False	NA	NA	NA	161038962	161000145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161000349_161000630_161000778_161001019_161001128_161001284_161001354_161021009_161021113_161021387_161021488_161038879
transcript_113932.known	chr5	+	6937	7	FSM	ENSG00000113658.18	ENST00000545620.5	6937	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	43.4117879536576	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTGTCTTTTTTTGTT	-33	True	NA	20	True	AATAAA	-14	NA	136132846	136182734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_113934.nic	chr5	+	1542	6	ISM	ENSG00000113658.18	ENST00000545279.6	7013	8	-9	9904	-9	0	5prime_fragment	FALSE	canonical	3	137	junction_2	55.046889103745	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTCCTGCTTAGTG	-44	True	NA	7	True	AATAAA	-18	NA	136132835	136172829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433
transcript_113937.nic	chr5	+	1470	5	ISM	ENSG00000113658.18	ENST00000545620.5	6937	7	-14	9905	-12	0	5prime_fragment	FALSE	canonical	3	143	junction_1	49.1445571757443	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTCCTGCTTAGTG	-47	True	NA	7	True	AATAAA	-18	NA	136132832	136172829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433
transcript_113939.nic	chr5	+	1061	4	ISM	ENSG00000113658.18	ENST00000545279.6	7013	8	-9	21591	-9	6979	5prime_fragment	FALSE	canonical	3	137	junction_2	64.4101441285972	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCCTAAGAATCACAGTT	-44	True	NA	NA	False	NA	NA	NA	136132835	136161142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855
transcript_11394.known	chr1	-	457	3	FSM	ENSG00000215845.11	ENST00000368024.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	500	2970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-22	True	NA	-15	True	AATAAA	-16	NA	161038977	161037630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912_161038076_161038879
transcript_113943.known	chr5	-	1816	2	FSM	ENSG00000164621.5	ENST00000297163.3	1816	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGTGTTATTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	136134890	136129506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_136129782_136133349
transcript_113944.known	chr5	+	669	2	FSM	ENSG00000113658.18	ENST00000507118.5	669	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGTGGAGAGTCCAGG	-33	True	NA	NA	False	AAAAAG	-27	NA	136132846	136154144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136132963_136153591
transcript_113945.nnic	chr5	-	660	3	Antisense	novelGene_ENSG00000213568.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTCCCTTTCTGGTGTC	NA	False	NA	NA	False	ATTAAA	-13	NA	136448406	136418247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_136418633_136430875_136431060_136448315
transcript_113947.nnic	chr5	+	490	2	Antisense	novelGene_ENSG00000152377.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	0	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTCCTGGCTCTATAC	NA	False	NA	21	True	TATAAA	-17	NA	137114786	137115503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_137115081_137115307
transcript_11395.known	chr1	-	626	3	FSM	ENSG00000215845.11	ENST00000318289.14	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	89	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	18	True	NA	-15	True	AATAAA	-16	NA	161038937	161037630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161038076_161038550_161038674_161038879
transcript_113950.known	chr5	-	6805	15	FSM	ENSG00000146021.15	ENST00000309755.9	6805	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	10.0033157768118	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTCAGTATTTCATTT	-6	True	NA	-11	True	AATAAA	-17	NA	137736089	137617499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_137622127_137625752_137625897_137628296_137628438_137634036_137634166_137637293_137637396_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_113954.nnic	chr5	-	1445	7	NNC	ENSG00000146021.15	novel	423	4	NA	NA	-13	325	intron_retention	FALSE	canonical	2	8	junction_1	12.9828947294336	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCTGGCTCATGACTG	15	True	NA	NA	False	AATAAA	-12	NA	137736102	137677091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_137677445_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_11396.known	chr1	-	591	2	FSM	ENSG00000215845.11	ENST00000462952.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	1410	junction_1	0	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	7668	False	NA	-15	True	AATAAA	-16	NA	161038307	161037630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912
transcript_113964.known	chr5	-	582	2	FSM	ENSG00000031003.11	ENST00000510804.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACCTTATTTTTGTAAAC	5722	False	NA	NA	False	NA	NA	NA	138032928	138020762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138021198_138032781
transcript_113965.known	chr5	-	4275	3	FSM	ENSG00000250159.7	ENST00000508281.3	4275	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137889394	137879723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_137883622_137888159_137888289_137889146
transcript_11397.known	chr1	-	477	3	FSM	ENSG00000215845.11	ENST00000466967.1	477	3	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_2	167.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCAACTCCTTATAGTG	7246	False	NA	-76	True	NA	NA	NA	161038729	161037691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912_161038076_161038550
transcript_113972.nic	chr5	-	1176	6	NIC	ENSG00000112981.5	novel	1208	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	8.99777750336159	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAAGTAATTTTTTGG	-21	True	NA	-6	True	AATAAA	-17	NA	138139428	138115174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138754_138139370
transcript_113973.known	chr5	-	1208	6	FSM	ENSG00000112981.5	ENST00000265191.4	1208	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	5.08330601085553	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAAGTAATTTTTTGG	-21	True	NA	-6	True	AATAAA	-17	NA	138139428	138115174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138786_138139370
transcript_113975.nic	chr5	-	795	6	NIC	ENSG00000112981.5	novel	1208	6	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	8.99777750336159	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGTTAAAGGAATAACT	-21	True	NA	NA	False	AATAAA	-16	NA	138139428	138115555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138754_138139370
transcript_113985.known	chr5	+	3095	19	FSM	ENSG00000112984.12	ENST00000394894.8	3095	19	0	0	0	0	multi-exon	TRUE	canonical	3	389	junction_8	57.2461923904977	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATCAAACATCATTC	-4	True	NA	82	True	ATTAAA	-26	NA	138179111	138187723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138179203_138179659_138179846_138181421_138181512_138181608_138181729_138182322_138182462_138182585_138182774_138182860_138182991_138183168_138183364_138183469_138183582_138183687_138183757_138183961_138184106_138184238_138184405_138184511_138184677_138184806_138184947_138185094_138185198_138185511_138185711_138185960_138186053_138186293_138186432_138187095
transcript_113991.nic	chr5	+	469	2	ISM	ENSG00000112984.12	ENST00000503417.1	598	4	-90	1892	-33	-1700	5prime_fragment	FALSE	canonical	3	496	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAATTAAGGGCAT	-3	True	NA	NA	False	AAGAAA	-5	NA	138179078	138180004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_138179203_138179659
transcript_113992.known	chr5	-	2982	21	FSM	ENSG00000112983.18	ENST00000402931.5	2982	21	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_13	207.671230554451	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-4	True	NA	0	True	AATAAA	-19	NA	138178633	138156881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_113993.known	chr5	-	3198	22	FSM	ENSG00000112983.18	ENST00000230901.9	3198	22	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_12	201.778970248307	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-1	True	NA	0	True	AATAAA	-19	NA	138178630	138156881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_113994.known	chr5	-	745	4	FSM	ENSG00000112983.18	ENST00000472478.6	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	230.845306548683	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	6684	False	NA	0	True	AATAAA	-19	NA	138160129	138156881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138157641_138157895_138159554_138159600_138160068
transcript_113995.known	chr5	-	2967	20	FSM	ENSG00000112983.18	ENST00000411594.6	2967	20	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_10	223.548701988325	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTAGCCTTTG	293	False	NA	-15	True	AATAAA	-4	NA	138178669	138156896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_113996.known	chr5	-	3133	16	FSM	ENSG00000094880.11	ENST00000394886.7	3133	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_7	38.1325174737899	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTAATATAACTGTTT	4	True	NA	46	True	AATAAA	-16	NA	138213323	138187649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138189149_138189632_138189753_138189827_138189907_138191473_138191536_138191861_138191938_138192268_138192389_138192503_138192658_138198198_138198281_138198425_138198524_138198604_138198783_138201106_138201240_138201342_138201449_138202112_138202156_138206546_138206685_138212990_138213064_138213151
transcript_113997.known	chr5	-	3005	21	FSM	ENSG00000112983.18	ENST00000454473.5	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	223.499099550759	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	363	False	NA	0	True	AATAAA	-19	NA	138178599	138156881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_113998.known	chr5	-	1988	8	FSM	ENSG00000146013.11	ENST00000274721.8	1988	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.2314999074019	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGCTCTTTTTCCATT	6	True	NA	-12	True	ATTAAA	-13	NA	138274621	138252379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138253058_138253286_138253376_138253765_138253901_138254056_138254161_138257638_138257952_138259556_138259650_138264260_138264549_138274333
transcript_114001.nic	chr5	-	2171	14	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	50.4139081026012	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	6521	False	NA	-19	True	AATAAA	-16	NA	138331886	138285268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_114003.nic	chr5	-	1863	14	NIC	ENSG00000158402.21	novel	2137	16	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	50.4139081026012	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACAGGCTACCAACTTGT	6521	False	NA	-9	True	ATTAAA	-16	NA	138331886	138285576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_11401.known	chr1	-	1807	11	FSM	ENSG00000158773.14	ENST00000368021.7	1807	11	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	3.78021163428716	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-2	True	NA	NA	False	GATAAA	-15	NA	161045977	161039250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_114016.known	chr5	-	1556	11	FSM	ENSG00000158402.21	ENST00000415130.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	93.0273615663693	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTACCAACTTGTATCC	8	True	NA	-5	True	ATTAAA	-20	NA	138331794	138285572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331215_138331594
transcript_11402.known	chr1	-	1092	11	FSM	ENSG00000158773.14	ENST00000473969.6	1092	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	4.10365690573664	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTCAGGGGCTT	13	True	NA	NA	False	NA	NA	NA	161045962	161039919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
transcript_114023.known	chr5	-	1059	8	FSM	ENSG00000158402.21	ENST00000503022.5	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	37.2317617315197	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCTCAGGAAGGTAAG	6535	False	NA	NA	False	GATAAA	-28	NA	138331872	138291984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_114025.nic	chr5	-	730	6	ISM	ENSG00000158402.21	ENST00000503022.5	1059	8	41	33830	-27	0	5prime_fragment	FALSE	canonical	3	141	junction_5	22.7385135837856	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTTTAATGGAAACC	6576	False	138331842	-23	True	AATAAA	-7	NA	138331831	138325814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_114029.nnic	chr5	+	935	4	NNC	ENSG00000120709.11	novel	551	4	NA	NA	-6	212	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	3.39934634239519	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGTGGAAATATAGCGC	NA	False	NA	NA	False	AATAAA	-17	NA	138332098	138337358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_138332352_138333432_138333529_138335384_138335486_138336873
transcript_114046.known	chr5	-	2093	14	FSM	ENSG00000158402.21	ENST00000323760.11	2093	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_13	51.7369312886993	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-2	True	NA	-19	True	AATAAA	-16	NA	138331804	138285268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
transcript_114047.known	chr5	+	551	4	FSM	ENSG00000120709.11	ENST00000511595.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.94392028877595	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTCTCCTTTATCCAC	NA	False	NA	NA	False	AATAGA	-44	NA	138332104	138337146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138332186_138333432_138333529_138335384_138335486_138336873
transcript_114048.known	chr5	+	4143	5	FSM	ENSG00000120709.11	ENST00000239906.10	4143	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	25.043711785596	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	1	True	NA	30	True	AATAAA	-33	NA	138338265	138349729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138344824_138345610_138346701
transcript_114049.known	chr5	+	1882	2	FSM	ENSG00000120709.11	ENST00000511024.5	1882	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	1	True	NA	NA	False	NA	NA	NA	138338265	138343023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138338308_138341183
transcript_11405.nic	chr1	-	2071	10	NIC	ENSG00000158773.14	novel	1807	11	NA	NA	-19	0	intron_retention	FALSE	canonical	2	9	junction_1	3.55902608401044	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	2896	False	NA	NA	False	GATAAA	-15	NA	161045996	161039250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_161040010_161040201_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_114050.known	chr5	+	6724	24	FSM	ENSG00000120733.14	ENST00000314358.10	6724	24	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_11	34.17385772758	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGTGGACTAAATTAT	-23	True	NA	NA	False	ATTAAA	-16	NA	138352684	138437027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138352988_138372673_138372842_138375092_138375207_138377719_138377826_138379583_138379709_138381515_138381591_138386021_138386622_138391012_138392262_138393170_138393373_138398177_138398393_138399859_138400013_138415131_138415240_138417482_138417611_138418952_138419233_138420705_138420963_138424074_138424342_138425410_138425583_138426974_138427066_138427188_138427320_138427966_138428087_138429825_138429966_138430248_138430426_138431424_138431560_138435619
transcript_114052.known	chr5	+	3137	2	FSM	ENSG00000120738.8	ENST00000239938.5	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	0	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGATTGGGTATGTGTT	-1	True	NA	8	True	AATAAA	-4	NA	138465478	138469303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138466069_138466756
transcript_114054.known	chr5	-	3682	11	FSM	ENSG00000120705.13	ENST00000360541.10	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_10	75.1998005316504	1076	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-13	True	NA	NA	False	ATTAAA	-16	NA	138543236	138506094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
transcript_114057.known	chr5	-	7459	12	FSM	ENSG00000113013.16	ENST00000649692.2	7459	12	0	0	0	0	multi-exon	TRUE	canonical	3	2602	junction_2	103.375269194289	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTATTTCTGCTTTTCTG	-30	True	NA	-7	True	AATAAA	-18	NA	138575421	138554887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_114058.known	chr5	-	3142	16	FSM	ENSG00000113013.16	ENST00000524109.2	3142	16	0	0	0	0	multi-exon	TRUE	canonical	3	2438	junction_4	142.578570931571	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTAGCCTGTCATTTTT	11	True	NA	-6	True	TATAAA	-17	NA	138575675	138555826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_114059.known	chr5	-	2120	16	FSM	ENSG00000113013.16	ENST00000507115.6	2120	16	0	0	0	0	multi-exon	FALSE	canonical	3	2438	junction_4	142.965947771566	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTCTTGATGACTGTC	255	False	NA	NA	False	NA	NA	NA	138575431	138556406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_11406.nic	chr1	-	2040	10	NIC	ENSG00000158773.14	novel	1807	11	NA	NA	-19	0	intron_retention	FALSE	canonical	2	4	junction_6	4.15739709641549	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	2896	False	NA	NA	False	GATAAA	-15	NA	161045996	161039250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_161040010_161040201_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
transcript_114060.known	chr5	-	2272	11	FSM	ENSG00000113013.16	ENST00000508003.2	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	2499	junction_1	118.330722975903	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTGACTTACCCAA	-28	True	NA	NA	False	NA	NA	NA	138575419	138559102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_114062.known	chr5	+	3754	18	FSM	ENSG00000044115.21	ENST00000302763.12	3754	18	0	0	0	0	multi-exon	TRUE	canonical	3	1416	junction_4	142.057179383982	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGAGCCCAAAGTCGTC	-10	True	NA	26	True	AATAAA	-22	NA	138753424	138935034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138753511_138781922_138782030_138783176_138783373_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_11407.known	chr1	-	990	9	FSM	ENSG00000158773.14	ENST00000496363.5	990	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	3.11999599358717	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCACCTTCCTTAGATG	2980	False	NA	NA	False	NA	NA	NA	161045912	161040439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_114073.known	chr5	+	224	2	FSM	ENSG00000044115.21	ENST00000521941.1	224	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGGATTTAAGTCTTA	10	True	NA	NA	False	AAGAAA	-23	NA	138753444	138762098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138753511_138761940
transcript_114074.known	chr5	-	587	2	FSM	ENSG00000253404.1	ENST00000520838.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCATCTCAGACCCG	142	False	NA	-13	True	AATAAA	-15	NA	138753309	138744433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138744763_138753051
transcript_114077.known	chr5	-	1895	11	FSM	ENSG00000120725.13	ENST00000265195.9	1895	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	24.3195394693238	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTGCCATTAAAGGAGAA	-16	True	NA	NA	False	NA	NA	NA	139198316	138946753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139196440_139196529_139198268
transcript_114080.known	chr5	-	1889	10	FSM	ENSG00000120725.13	ENST00000394817.7	1889	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	13.8973307677818	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCACACTAGTGCT	-2	True	NA	NA	False	ATTAAA	-17	NA	139198368	138946723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139198268
transcript_114084.nnic	chr5	-	841	4	NNC	ENSG00000120725.13	novel	843	4	NA	NA	31191	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	31.0304509939654	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCATCCTCTTTCTGCTG	NA	False	NA	-11	True	ATTAAA	-12	NA	139011491	138946994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_138947474_138951170_138951336_138951787_138951885_139011391
transcript_114085.known	chr5	-	435	3	FSM	ENSG00000120725.13	ENST00000440765.2	435	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGCTCCTGAATAAATTC	-8	True	NA	NA	False	NA	NA	NA	139198308	139187750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139188058_139196440_139196529_139198268
transcript_114097.known	chr5	+	3970	18	FSM	ENSG00000280987.4	ENST00000361059.7	3970	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	1061.14825513552	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGCCATGTTAATTG	-13	True	NA	5	True	AATAAA	-7	NA	139274102	139330394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_114101.known	chr5	+	2243	17	FSM	ENSG00000280987.4	ENST00000504203.5	2243	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	1096.83571688916	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAACAAAACCAATAG	-12	True	NA	-23	True	AAGAAA	-23	NA	139274103	139329757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_114103.known	chr5	+	3249	17	FSM	ENSG00000280987.4	ENST00000509990.5	3249	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1019.7032177765	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGATTTAATGATTTCAAA	NA	False	NA	NA	False	NA	NA	NA	139273751	139329404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_114110.known	chr5	+	5069	15	FSM	ENSG00000015479.20	ENST00000394805.8	5069	15	0	0	0	0	multi-exon	FALSE	canonical	3	1711	junction_1	426.552057975654	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTACAGTTCTTTT	-3	True	NA	12	True	AATGAA	-20	NA	139293739	139331677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_114118.known	chr5	+	4018	15	FSM	ENSG00000015479.20	ENST00000618441.5	4018	15	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	683.254550378002	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	35	False	NA	52	True	NA	NA	NA	139293777	139330441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139294029_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_114129.known	chr5	+	2518	14	FSM	ENSG00000015479.20	ENST00000503811.5	2518	14	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	660.11611852827	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTGCTAGATTTCGTA	7	True	NA	NA	False	AAGAAA	-42	NA	139293749	139330002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139294029_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_114142.known	chr5	+	2664	13	FSM	ENSG00000015479.20	ENST00000502499.5	2664	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	802.967149424904	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTGGTTATACATGT	8	True	NA	16	True	AATAAA	-18	NA	139293721	139330405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139293806_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_11415.known	chr1	+	1038	5	FSM	ENSG00000162755.14	ENST00000490724.6	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	21.569654610123	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGCTTCACTTCAAAT	6	True	NA	-29	True	TATAAA	-16	NA	161098360	161100298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161098405_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_11417.nic	chr1	+	1143	5	NIC	ENSG00000162755.14	novel	1347	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	31.4434015335491	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	26	True	NA	19	True	ATTAAA	-19	NA	161098380	161100346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161098482_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_114180.known	chr5	+	801	7	FSM	ENSG00000281398.4	ENST00000506188.5	801	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	78.0222546599508	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCTGCCTCCTAAATTCT	-13	True	NA	NA	False	NA	NA	NA	139274102	139282989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139278564_139278741_139279050_139279130_139279934_139280059_139282738
transcript_114187.nnic	chr5	+	803	7	NNC	ENSG00000281398.4	novel	801	7	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	84.5742605971554	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	-16	True	NA	13	True	AATAAA	-14	NA	139274099	139284900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738_139282856_139284591
transcript_114188.nnic	chr5	+	867	7	NNC	ENSG00000281398.4	novel	801	7	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	84.5742605971554	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	-17	True	NA	13	True	AATAAA	-14	NA	139274098	139284900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738_139282869_139284541
transcript_114189.nnic	chr5	+	929	7	NNC	ENSG00000281398.4	novel	801	7	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	84.5742605971554	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	218	False	NA	13	True	AATAAA	-14	NA	139274044	139284900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738_139282877_139284541
transcript_114206.known	chr5	+	575	7	FSM	ENSG00000015479.20	ENST00000512876.5	575	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	884.364492477822	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAGTGAGAGTTCATT	-5	True	NA	NA	False	NA	NA	NA	139293673	139318987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139293773_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907
transcript_11421.known	chr1	+	921	4	FSM	ENSG00000162755.14	ENST00000469647.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32.273139846559	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATTTGTCTCTGAAATT	8	True	NA	16	True	ATTAAA	-16	NA	161098362	161100343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161098405_161098665_161099063_161099597_161099797_161100060
transcript_114214.nnic	chr5	+	762	6	NNC	ENSG00000281398.4	novel	865	6	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	85.9022700514952	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	218	False	NA	13	True	AATAAA	-14	NA	139274044	139284900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280030_139284541
transcript_114215.known	chr5	+	865	6	FSM	ENSG00000281398.4	ENST00000507197.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	72.8516300435344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCTGAGTTAGAATCT	2	True	NA	NA	False	NA	NA	NA	139274117	139283244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738
transcript_114218.nnic	chr5	+	782	6	NNC	ENSG00000281398.4	novel	865	6	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	85.9022700514952	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	218	False	NA	13	True	AATAAA	-14	NA	139274044	139284900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139284550
transcript_114235.known	chr5	+	444	6	FSM	ENSG00000281398.4	ENST00000513259.5	444	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	95.0338886924028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATAATATTATGCTTGT	-12	True	NA	NA	False	NA	NA	NA	139274103	139280059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274166_139274363_139274430_139276120_139276151_139278326_139278409_139279050_139279130_139279934
transcript_114242.nnic	chr5	+	552	5	NNC	ENSG00000281398.4	novel	2383	5	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	87.7083234362623	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	-16	True	NA	13	True	AATAAA	-14	NA	139274099	139284900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279108_139284579
transcript_114243.known	chr5	+	1264	5	FSM	ENSG00000281398.4	ENST00000648842.1	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	62.1384542775245	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCGATTTTTTTTTT	-14	True	NA	13	True	AATAAA	-17	NA	139274101	139280947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934
transcript_114246.known	chr5	+	2383	5	FSM	ENSG00000281398.4	ENST00000505522.6	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	77.5806032459145	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTTGTCATTAGGG	15	True	NA	12	True	AATAAA	-13	NA	139274130	139284899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139282738
transcript_114263.known	chr5	+	679	4	FSM	ENSG00000281398.4	ENST00000514110.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	21.3541565040626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTCCTGGGTTCAAGC	15	True	NA	NA	False	NA	NA	NA	139274130	139279586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050
transcript_114273.known	chr5	+	1530	7	FSM	ENSG00000015479.20	ENST00000504045.5	1530	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	914.96510255249	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGAGGTATGAATTGAA	4	True	NA	NA	False	AATAAA	-2	NA	139293717	139317713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139293773_139307240_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595
transcript_114274.known	chr5	+	1001	8	FSM	ENSG00000015479.20	ENST00000515833.2	1001	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	823.795694901822	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTGAGGGTATGTAG	677	False	NA	NA	False	TATAAA	-4	NA	139308094	139322017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139308328_139314674_139314737_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897
transcript_114275.known	chr5	+	444	5	FSM	ENSG00000015479.20	ENST00000513678.5	444	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1135.44426877764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAAATCATCTGATTCT	1	True	NA	NA	False	NA	NA	NA	139293679	139317685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139293806_139314674_139314737_139316075_139316189_139317052_139317106_139317595
transcript_114287.known	chr5	+	858	4	FSM	ENSG00000120727.13	ENST00000510080.1	858	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1846.48476841809	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTACCAAATTGTCTTTTT	39	False	NA	9	True	ATTAAA	-10	NA	139342450	139369080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139342617_139363758_139363923_139364563_139364744_139368732
transcript_114294.known	chr5	+	1456	4	FSM	ENSG00000120727.13	ENST00000265192.9	1456	4	0	0	0	0	multi-exon	FALSE	canonical	3	3843	junction_3	248.415422673839	23128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGGTTGTGTTTATTG	-6	True	NA	14	True	AATAAA	-16	NA	139341853	139369717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139341981_139363758_139363923_139364563_139364744_139368732
transcript_114295.known	chr5	+	468	3	FSM	ENSG00000120727.13	ENST00000511706.5	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2213	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATAAAAGTGCTGAGA	18	True	NA	NA	False	NA	NA	NA	139341877	139368933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139341981_139363758_139363923_139368732
transcript_114296.known	chr5	+	815	3	FSM	ENSG00000120727.13	ENST00000510409.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	3987	junction_2	220	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATTGCACCATTGCAC	-3	True	NA	NA	False	NA	NA	NA	139341856	139365090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139341981_139363758_139363923_139364563
transcript_114298.known	chr5	-	925	4	FSM	ENSG00000170476.16	ENST00000302125.9	925	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTGAGACAGT	0	True	NA	87	True	NA	NA	NA	139389913	139387466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139387922_139388020_139388132_139388460_139388586_139389679
transcript_114299.known	chr5	-	1887	3	FSM	ENSG00000170476.16	ENST00000503120.5	1887	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTTTCTCTGCAAAAG	0	True	NA	-15	True	AATAAA	-14	NA	139389883	139387568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139387922_139388020_139388132_139388460
transcript_114301.known	chr5	-	680	6	FSM	ENSG00000170469.11	ENST00000450845.7	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	19.2208220427743	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCTCTGCCTTCTC	-3	True	NA	-5	True	AATAAA	-33	NA	139404089	139396766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139396930_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
transcript_114305.known	chr5	-	909	6	FSM	ENSG00000170469.11	ENST00000302091.9	909	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.013039781828	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCCCACTCCCAGTG	-2	True	NA	-10	True	TATAAA	-22	NA	139404088	139396562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139396956_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
transcript_114308.known	chr5	-	606	4	FSM	ENSG00000170469.11	ENST00000507779.2	606	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.7296493213219	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCATTTTTCCTGAA	26	False	NA	-27	True	CATAAA	-10	NA	139404060	139401524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139401817_139401914_139402046_139402627_139402694_139403943
transcript_114314.known	chr5	-	5102	8	FSM	ENSG00000170464.10	ENST00000302060.10	5102	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	11.9146625497103	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACTTTTCCTTGGTTC	-16	True	NA	-8	True	ATTAAA	-20	NA	139439525	139410202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139414273_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
transcript_114322.known	chr5	-	1031	10	FSM	ENSG00000249751.4	ENST00000618155.3	1031	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	2.23330569358242	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATTACTTTTAAGGTC	-17	True	NA	-14	True	ATTAAA	-19	NA	139462743	139448559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139448909_139449077_139449175_139454601_139454639_139454824_139454924_139455322_139455437_139456473_139456519_139457544_139457605_139457756_139457808_139458138_139458184_139462609
transcript_114323.known	chr5	-	432	4	FSM	ENSG00000170464.10	ENST00000514052.1	432	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	82.2854111546445	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTAGCTCTTCAGTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	139425048	139419067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139419173_139420052_139420226_139422707_139422818_139425004
transcript_114324.known	chr5	+	2087	2	FSM	ENSG00000286403.1	ENST00000657350.1	2087	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTTTTTTGTTTTTTT	-2	True	NA	NA	False	NA	NA	NA	139503241	139511374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139503814_139509859
transcript_114328.known	chr5	+	2530	7	FSM	ENSG00000131508.16	ENST00000398733.8	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	1957	junction_1	302.144005401398	4613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACCTTGTCTTATC	-15	True	NA	10	True	AATAAA	-24	NA	139561338	139628434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_114338.known	chr5	+	901	8	FSM	ENSG00000131508.16	ENST00000398734.8	901	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	841.820039908671	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATTTTGTGTGAATAG	-7	True	NA	NA	False	AATAAA	-21	NA	139561725	139627686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755_139627058_139627551
transcript_114342.known	chr5	+	2601	3	FSM	ENSG00000171604.12	ENST00000302517.8	2601	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	50	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	-28	True	NA	35	True	AATAAA	-25	NA	139648348	139683882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139648846_139680363_139681448_139682862
transcript_114344.known	chr5	+	1892	3	FSM	ENSG00000171604.12	ENST00000511048.1	1892	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	257	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTCGTTTATCCATT	-19	True	NA	NA	False	AATGAA	-2	NA	139648932	139683593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139649010_139680363_139681448_139682862
transcript_114347.known	chr5	+	760	2	FSM	ENSG00000171604.12	ENST00000515038.1	760	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAACTGCTTTTTCG	5470	False	NA	42	True	CATAAA	-14	NA	139680957	139683111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139681469_139682862
transcript_114350.known	chr5	+	665	4	FSM	ENSG00000120306.11	ENST00000509589.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	222.353072587021	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCCATGTTTT	-4	True	NA	NA	False	GATAAA	-26	NA	140175155	140244810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140175286_140194445_140194653_140243304_140243464_140244641
transcript_114351.known	chr5	+	462	3	FSM	ENSG00000120306.11	ENST00000644078.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	222	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTTTCTTTGACA	3	True	NA	NA	False	AATAAA	-23	NA	140175216	140228915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140175286_140194445_140194653_140228729
transcript_114352.known	chr5	+	790	3	FSM	ENSG00000120306.11	ENST00000261811.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	29	2754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	28	True	NA	17	True	AATAAA	-17	NA	140175187	140243789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140175286_140194445_140194653_140243304
transcript_114358.known	chr5	-	1091	3	FSM	ENSG00000113068.10	ENST00000510217.1	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	342.5	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTTGCAAATTATGTT	-17	True	NA	-76	True	NA	NA	NA	140303113	140245124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140246058_140281448_140281534_140303040
transcript_114360.known	chr5	-	1336	4	FSM	ENSG00000113068.10	ENST00000261813.9	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_3	54.3098108591399	3597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTGACTGTGATCTG	-5	True	NA	14	True	NA	NA	NA	140303101	140245034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140246058_140281448_140281534_140300415_140300583_140303040
transcript_114361.known	chr5	-	1139	2	FSM	ENSG00000113068.10	ENST00000514611.1	1139	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAAAATGCATCCCTAA	2513	False	NA	-38	True	AATAAA	-1	NA	140300583	140245086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140246058_140300415
transcript_114362.known	chr5	+	4079	13	FSM	ENSG00000131503.21	ENST00000431508.5	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	26.6374840320094	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGAAGTGGGGTGTGATC	88	False	NA	18	True	AATAAA	-14	NA	140510109	140539849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537337_140537590_140538085_140538262_140538918_140539084_140539358
transcript_114364.known	chr5	+	8246	36	FSM	ENSG00000254996.5	ENST00000532219.5	8246	36	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_30	88.5058466879968	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCCTTGGCTCCA	26	False	NA	1	True	AGTAAA	-6	NA	140401907	140549569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140402274_140436103_140436258_140438460_140438618_140440118_140440267_140440994_140441143_140445741_140445976_140449210_140449306_140458624_140458863_140459163_140459356_140464666_140464777_140482579_140482668_140485120_140485249_140485588_140485733_140486957_140487061_140496519_140497279_140504820_140504967_140505121_140505234_140505723_140505870_140506834_140506978_140507784_140507999_140509636_140509813_140510018_140510182_140512827_140512924_140513362_140513480_140524065_140524241_140525995_140526444_140526927_140527075_140527872_140528023_140528183_140529797_140535361_140535539_140537388_140537590_140538085_140538262_140538918_140539084_140542171_140542282_140548905_140549077_140549233
transcript_114368.known	chr5	-	1328	5	FSM	ENSG00000213523.12	ENST00000336283.9	1328	5	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_4	185.576803507335	3211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-22	True	NA	-23	True	NA	NA	NA	140557473	140550067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557273_140557427
transcript_114369.known	chr5	-	978	5	FSM	ENSG00000213523.12	ENST00000520427.1	978	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	535.818066138125	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGACACCATCTCCTAT	6945	False	NA	NA	False	NA	NA	NA	140557677	140550681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557333_140557427
transcript_11437.known	chr1	-	408	2	FSM	ENSG00000143256.5	ENST00000468311.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGCCTGAAGTTTTCT	-14	True	NA	-1	True	ATTAAA	-20	NA	161118055	161100555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161100860_161117951
transcript_114377.known	chr5	+	693	3	FSM	ENSG00000243056.2	ENST00000310331.3	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	34.5	435	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	4	True	NA	8	True	AGTAAA	-13	NA	140547661	140549576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140547841_140548905_140549077_140549233
transcript_114378.known	chr5	-	769	3	FSM	ENSG00000213523.12	ENST00000602875.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	609.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTACTCATAACATGC	5	True	NA	-91	True	NA	NA	NA	140557446	140550551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140550912_140551060_140551170_140557146
transcript_11438.known	chr1	-	598	4	FSM	ENSG00000143256.5	ENST00000368010.4	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_1	137.463530517087	24650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	4	True	NA	-6	True	ATTAAA	-15	NA	161118037	161100560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161100860_161102047_161102172_161102286_161102376_161117951
transcript_114381.known	chr5	-	1466	4	FSM	ENSG00000213523.12	ENST00000602775.5	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_2	64.546279693118	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-5	True	NA	-23	True	NA	NA	NA	140557456	140550067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146
transcript_114382.known	chr5	-	2131	13	FSM	ENSG00000113108.20	ENST00000357560.9	2131	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	27.6810956350278	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGTGAGTATATTGGG	-21	True	NA	-1	True	AATAAA	-19	NA	140564598	140558267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140561850_140562099_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
transcript_114391.known	chr5	+	2666	3	FSM	ENSG00000176087.16	ENST00000323146.8	2666	3	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	145	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTCTTGTGTCTTCTG	2	True	NA	19	True	AATAAA	-40	NA	140564827	140569100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140564859_140565872_140565972_140566564
transcript_114392.known	chr5	-	2020	13	FSM	ENSG00000113108.20	ENST00000509914.5	2020	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	27.0630693422276	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATGTGAGTATATTGG	9	True	NA	-2	True	AATAAA	-18	NA	140564332	140558268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140558822_140560312_140560505_140560638_140560755_140561017_140561102_140561364_140561450_140561586_140561702_140561843_140562047_140562140_140562228_140562352_140562500_140562662_140562724_140563593_140563671_140563751_140563916_140564196
transcript_114393.known	chr5	+	2789	3	FSM	ENSG00000176087.16	ENST00000612662.2	2789	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	368.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCCATGATTGTCT	-7	True	NA	8	True	AATAAA	-29	NA	140564818	140569089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140564859_140565747_140565972_140566564
transcript_114399.known	chr5	+	1905	20	FSM	ENSG00000113141.19	ENST00000417647.7	1905	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	626	junction_7	72.4596745240618	3492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTTGAGCATGTC	-18	True	NA	52	True	ATTAAA	-17	NA	140647828	140662480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828_140655993_140657553_140657663_140658736_140658777_140658938_140659165_140659314_140659334_140659755_140659835_140660114_140660196_140660757_140660816_140661619_140661709_140661898_140662008_140662178_140662214_140662301
transcript_1144.known	chr1	+	551	3	FSM	ENSG00000158286.13	ENST00000484435.1	551	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAATGCTTGCACATGCA	18	True	NA	NA	False	NA	NA	NA	6206128	6207564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6206303_6206535_6206727_6207378
transcript_114400.known	chr5	+	1834	12	FSM	ENSG00000113119.13	ENST00000252100.6	1834	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	27.9610118167813	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	-4	True	NA	23	True	AATAAA	-23	NA	140639503	140645408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642906_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_114401.known	chr5	-	649	3	FSM	ENSG00000131495.9	ENST00000252102.9	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_1	33.5	8171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTGGTCCTCCTGCCT	-12	True	NA	76	True	NA	NA	NA	140647630	140645284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140645679_140647255_140647363_140647482
transcript_114402.known	chr5	-	627	3	FSM	ENSG00000131495.9	ENST00000512088.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	771.5	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCAGCTGCTGAAGC	133	False	140647654	-8	True	AATAAA	-21	NA	140647645	140645368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140645726_140647255_140647363_140647482
transcript_114403.known	chr5	-	721	2	FSM	ENSG00000131495.9	ENST00000502960.1	721	2	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_1	0	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCAGGGTGTTCTTGT	7	False	NA	-11	True	CATAAA	-18	NA	140647771	140645473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140645679_140647255
transcript_114404.known	chr5	+	868	9	FSM	ENSG00000113141.19	ENST00000508301.5	868	9	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_7	70.6407062181572	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAATGGAATCCTGA	-5	True	NA	NA	False	NA	NA	NA	140647841	140655992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828
transcript_114405.known	chr5	+	2363	15	FSM	ENSG00000112855.17	ENST00000645065.1	2363	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	51.7892117045586	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATAACATGTTAAATA	-12	True	NA	-22	True	NA	NA	NA	140691452	140699271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691516_140691606_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_114407.known	chr5	+	2292	14	FSM	ENSG00000112855.17	ENST00000645749.1	2292	14	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	33.8922762666149	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCATACCGTGCCATGGA	5	True	NA	-58	True	NA	NA	NA	140691469	140699235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691516_140691606_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_114408.known	chr5	+	2469	14	FSM	ENSG00000112855.17	ENST00000646468.1	2469	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	47.7261666410421	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	-7	True	NA	-2	True	NA	NA	NA	140691457	140699291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_114414.known	chr5	+	3852	7	FSM	ENSG00000120314.19	ENST00000358337.10	3852	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	16.4991582276861	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACTCTAAGATCTTG	-1	True	NA	26	True	AGTAAA	-19	NA	140664903	140672345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332
transcript_114424.known	chr5	-	1896	13	FSM	ENSG00000170445.16	ENST00000457527.6	1896	13	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_8	125.512587903454	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-24	True	NA	-2	True	AATAAA	-18	NA	140691377	140673903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_114425.known	chr5	-	915	5	FSM	ENSG00000170445.16	ENST00000509087.2	915	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	234.038858952953	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCTGCGTGTGTCAGTGA	0	True	NA	-5	True	AATAAA	-15	NA	140691353	140673906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140690854_140690945_140691214
transcript_114426.known	chr5	-	1780	12	FSM	ENSG00000170445.16	ENST00000307633.7	1780	12	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_10	179.35098789665	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCGTGTGTCAGTGAT	-30	True	NA	-4	True	AATAAA	-16	NA	140691383	140673905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140690854_140690945_140691214
transcript_114427.known	chr5	-	1789	12	FSM	ENSG00000170445.16	ENST00000438307.6	1789	12	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_10	140.007791990952	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACGGAGTCTGCGTGT	12	True	NA	-13	True	AATAAA	-7	NA	140691341	140673914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140690854_140690945_140691214
transcript_114428.known	chr5	-	1145	4	FSM	ENSG00000170445.16	ENST00000518126.6	1145	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	38.2883794381533	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCACATAGCAAAGGTAT	10	True	NA	NA	False	AATAAA	-18	NA	140691343	140679077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140679884_140683099_140683220_140690854_140690945_140691214
transcript_114429.known	chr5	+	2468	13	FSM	ENSG00000112855.17	ENST00000230771.9	2468	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	17.5093229134907	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGGTAATTTGTTA	-10	True	NA	12	True	AATAAA	-13	NA	140691454	140699305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_114430.known	chr5	+	2346	12	FSM	ENSG00000112855.17	ENST00000642752.1	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	41.7705262057367	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTTAAATAAAATATTAA	-12	True	NA	-13	True	NA	NA	NA	140691452	140699280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_114431.known	chr5	+	735	6	FSM	ENSG00000146007.11	ENST00000506644.3	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	89.1448259855837	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTGGGGGCTCATGGT	16	False	NA	NA	False	NA	NA	NA	140700463	140705881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140704005_140704425_140704572_140705612
transcript_114432.known	chr5	+	89	1	FSM	ENSG00000202515.1	ENST00000365645.1	89	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGAAGTTCAGCTCAC	-1	True	NA	-22	True	NA	NA	NA	140726157	140726246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140726200_140726200
transcript_114433.known	chr5	+	2808	2	FSM	ENSG00000204967.12	ENST00000672575.1	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACTTATTACCTCA	6	True	NA	NA	False	NA	NA	NA	140807080	140817546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140809573_140817230
transcript_114434.known	chr5	+	5395	4	FSM	ENSG00000081842.18	ENST00000529310.6	5395	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.8202166679401	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-8	True	NA	NA	False	AATAAA	-20	NA	140827959	141012347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140830486_140978948_140979008_140982474_140982564_141009626
transcript_114435.known	chr5	+	3267	1	FSM	ENSG00000081842.18	ENST00000378126.4	3267	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTGGCATTGCGGCTC	-10	True	NA	3	True	AGTAAA	-18	NA	140827957	140831224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140828000_140831200
transcript_114436.known	chr5	+	3788	4	FSM	ENSG00000250120.8	ENST00000506939.6	3788	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.8202166679401	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTGCCAAGACTTCTGC	89	False	NA	65	True	NA	NA	NA	140856009	141011628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140857648_140978948_140979008_140982474_140982564_141009626
transcript_114437.known	chr5	+	5407	4	FSM	ENSG00000249158.7	ENST00000398640.7	5407	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	54.0637483799347	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	0	True	NA	NA	False	AATAAA	-20	NA	140868956	141012347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140871495_140978948_140979008_140982474_140982564_141009626
transcript_114438.known	chr5	+	5401	4	FSM	ENSG00000251664.5	ENST00000398631.3	5401	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	44.0479536666827	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGTGGTCATTTCTAA	-5	True	NA	NA	False	AATAAA	-20	NA	140875307	141012347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140877840_140978948_140979008_140982474_140982564_141009626
transcript_114439.known	chr5	-	577	1	FSM	ENSG00000278915.1	ENST00000624566.1	577	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTCGATCCTATTC	NA	False	NA	NA	False	AGTAAA	-22	NA	140875922	140875345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140875300_140875900
transcript_11444.known	chr1	+	1518	7	FSM	ENSG00000158793.14	ENST00000392190.9	1518	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.3394997718502	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	8	True	NA	4	True	AATAAA	-13	NA	161118117	161121193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118226_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_114440.known	chr5	+	519	2	FSM	ENSG00000112852.7	ENST00000625033.1	519	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAAACGTTTCGATTAAG	7	True	NA	NA	False	NA	NA	NA	141094626	141095660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141094832_141095346
transcript_114441.known	chr5	+	498	2	FSM	ENSG00000177839.7	ENST00000623266.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCCTCGCCTCCCTGG	4688	False	NA	NA	False	NA	NA	NA	141187126	141188808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141187354_141188537
transcript_114442.known	chr5	+	616	2	FSM	ENSG00000177839.7	ENST00000624909.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGACTCAGGCACCAAC	45	False	NA	NA	False	NA	NA	NA	141187206	141188747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141187354_141188278
transcript_114443.nnic	chr5	-	541	2	FSM	ENSG00000178913.9	ENST00000686518.1	683	2	-200	342	-8	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGAGGCTGTCTTCGGTGTT	NA	False	NA	NA	False	AATAAA	-30	NA	141320792	141260225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141260492_141320517
transcript_114444.known	chr5	-	2295	1	FSM	ENSG00000178913.9	ENST00000313368.8	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1826	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTATCTTGTTCTTTCA	-11	True	NA	-5	True	AATAAA	-25	NA	141320784	141318489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141318500_141320800
transcript_114445.nnic	chr5	+	1540	2	NIC	ENSG00000288095.1	novel	1508	3	NA	NA	-143	24	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGAAATGATCATTTT	87	False	NA	NA	False	AATAAA	-15	NA	141320836	141326009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_141321104_141324736
transcript_114446.known	chr5	+	4725	1	FSM	ENSG00000253953.3	ENST00000615384.1	4725	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGCTGTTTCTTTTA	4762	False	NA	4	True	AATAAA	-15	NA	141387697	141392422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141387700_141392400
transcript_114447.known	chr5	+	731	5	FSM	ENSG00000240184.7	ENST00000617222.4	731	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	95.312643442515	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCTGCACCCAGGCCTC	31	True	NA	NA	False	NA	NA	NA	141476000	141511230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141476147_141478393_141478547_141494806_141494866_141505392_141505482_141510946
transcript_114448.known	chr5	+	4758	4	FSM	ENSG00000240184.7	ENST00000308177.5	4758	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	74.8702581507207	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACGTTTCTGTATAAG	-4	True	NA	24	True	AATAAA	-17	NA	141475965	141512975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141478547_141494806_141494866_141505392_141505482_141510946
transcript_114449.known	chr5	+	812	4	FSM	ENSG00000242419.6	ENST00000618371.4	812	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	100.332779621949	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAATCAGGCCCATCCAT	31	False	NA	NA	False	NA	NA	NA	141485071	141511496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141485186_141494806_141494866_141505392_141505482_141510946
transcript_114450.known	chr5	+	2346	4	FSM	ENSG00000240184.7	ENST00000617641.4	2346	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	98.9376908294643	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGTTTCTGTATAAGCG	10	True	NA	26	True	AATAAA	-19	NA	141475979	141512977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141476147_141494806_141494866_141505392_141505482_141510946
transcript_114451.known	chr5	-	5789	28	NNC	ENSG00000131504.18	novel	5843	29	NA	NA	0	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	122.177915650507	214	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTACAGCTTCCTGT	5	True	NA	-23	True	AATAAA	-14	NA	141619055	141515021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_141517009_141524142_141524230_141526037_141526174_141526296_141526460_141527570_141527698_141528452_141528583_141528701_141528942_141529171_141529274_141529602_141529698_141534334_141534434_141550498_141550508_141571925_141572041_141573491_141574209_141574966_141575147_141576229_141576295_141576755_141576872_141577474_141577592_141578224_141578344_141578514_141578626_141579087_141579197_141580743_141580884_141582311_141582376_141583205_141583293_141583484_141583616_141584123_141584226_141587041_141587198_141588223_141588251_141618797
transcript_114453.known	chr5	-	1933	15	FSM	ENSG00000171720.10	ENST00000305264.8	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_2	92.1940334073652	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCGCCTTTCTAGGAAT	-3	True	NA	-23	True	AATAAA	-21	NA	141636849	141620880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810_141634954_141636547_141636631_141636735
transcript_114460.known	chr5	+	621	3	FSM	ENSG00000228737.2	ENST00000422040.2	621	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTCCCCCCTCTGTTC	NA	False	NA	NA	False	AATAAA	-15	NA	141618413	141626481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141618490_141625846_141625966_141626055
transcript_114461.known	chr5	-	830	2	FSM	ENSG00000171720.10	ENST00000492506.1	830	2	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGGCGTGGTGGCCCA	3	True	NA	NA	False	NA	NA	NA	141636843	141635908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141636631_141636735
transcript_114462.known	chr5	-	829	3	FSM	ENSG00000171720.10	ENST00000469207.5	829	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	755.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCACTGTTTTTATCCAA	3101	False	NA	-67	True	NA	NA	NA	141626070	141620924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141621538_141625207_141625366_141626012
transcript_114464.known	chr5	-	4319	20	FSM	ENSG00000197948.11	ENST00000435817.7	4319	20	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	21.4433480248593	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	-14	True	NA	-9	True	AATAAA	-19	NA	141651418	141639301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649537_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_114469.known	chr5	+	2154	8	FSM	ENSG00000164620.9	ENST00000444782.5	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	52.0156962181727	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	-31	True	NA	13	True	AATAAA	-16	NA	141636949	141641063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_114471.known	chr5	+	1419	7	FSM	ENSG00000164620.9	ENST00000518856.1	1419	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	74.0197045837571	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCATTACAGCTGCTT	8	True	NA	3	True	AATAAA	-6	NA	141637441	141641053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141637749_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_114472.known	chr5	+	2536	7	FSM	ENSG00000164620.9	ENST00000297164.8	2536	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	32.2783036866699	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	16	True	NA	14	True	AATAAA	-17	NA	141636996	141641064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_114475.known	chr5	+	2461	6	FSM	ENSG00000164620.9	ENST00000518025.5	2461	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	70.9743615681043	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	24	True	NA	14	True	AATAAA	-17	NA	141637004	141641064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141638410_141638794_141638861_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_114479.known	chr5	-	719	3	FSM	ENSG00000197948.11	ENST00000518160.1	719	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	31.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTAGTAGTTCTGGCC	8808	False	NA	NA	False	GGGGCT	-17	NA	141642704	141641208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141641564_141641701_141641758_141642396
transcript_114480.known	chr5	-	5258	33	FSM	ENSG00000120318.16	ENST00000239440.9	5258	33	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_32	30.8910478284162	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATTCTCATTCATTCA	-2	True	NA	-6	True	AATAAA	-17	NA	141682230	141653401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680504_141682172
transcript_114481.known	chr5	-	4927	32	FSM	ENSG00000120318.16	ENST00000508305.5	4927	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	44.6418514529207	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATTCTCATTCATTCAT	-3	True	NA	-5	True	AATAAA	-18	NA	141682203	141653400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671324_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680472_141682172
transcript_114486.nnic	chr5	+	2394	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_13	63.1337455128809	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATCACTCTTGCCCTT	NA	False	NA	14	True	AATAAA	-15	NA	141923790	141940146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939505
transcript_114487.nnic	chr5	+	2352	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	6	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_13	68.653921568586	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTGCCCTTGAGTAT	NA	False	NA	20	True	AATAAA	-21	NA	141923790	141940152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939553
transcript_114488.nic	chr5	+	2390	14	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_12	69.6624150529245	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATCACTCTTGCCCTT	NA	False	NA	14	True	AATAAA	-15	NA	141923790	141940146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938855_141938905_141939505
transcript_114490.nnic	chr5	+	2347	13	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	6	combination_of_known_splicesites	FALSE	canonical	3	51	junction_12	48.3034390310071	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTGCCCTTGAGTAT	NA	False	NA	20	True	AATAAA	-21	NA	141923790	141940152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939505
transcript_114491.known	chr5	+	2203	13	FSM	ENSG00000081791.9	ENST00000194118.8	2203	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	57.2763161253313	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	20	True	NA	-12	True	NA	NA	NA	141923854	141940120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939553
transcript_114493.known	chr5	+	4907	12	FSM	ENSG00000081791.9	ENST00000432126.7	4907	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	26.3247361912174	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTCTGATCATGTC	-2	True	NA	8	True	AATAAA	-19	NA	141923870	141942047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520
transcript_114505.nic	chr5	+	2197	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-64	4637	-64	487	5prime_fragment	FALSE	canonical	3	184	junction_9	16.1986129569292	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTACATAGGGGACTG	NA	False	NA	17	True	ATTAAA	-27	NA	141923790	141935483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_114510.nic	chr5	+	1825	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-119	148	-64	-148	5prime_fragment	FALSE	canonical	3	197	junction_5	12.5795428358579	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCAAAAGATGCTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	141923790	141934178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
transcript_114515.known	chr5	+	4170	9	FSM	ENSG00000013561.18	ENST00000394520.7	4170	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	26.3008436176485	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTTCATGAAAGCCTT	-8	True	NA	9	True	AATAAA	-16	NA	141969104	141990292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_114527.known	chr5	+	2905	8	FSM	ENSG00000013561.18	ENST00000394514.6	2905	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	41.0494972501466	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	-2	True	NA	20	True	AATAAA	-28	NA	141969110	141989185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_114531.known	chr5	+	4213	8	FSM	ENSG00000013561.18	ENST00000347642.7	4213	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	46.2592516946279	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAATTTCATGAAAGCC	2042	False	NA	7	True	AATAAA	-14	NA	141968885	141990290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141969168_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_114548.nic	chr5	+	2224	6	NIC	ENSG00000013561.18	novel	2905	8	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	54.3492410250594	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	-13	True	NA	20	True	AATAAA	-28	NA	141969034	141989185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_141969168_141970703_141970878_141973582_141973743_141983379_141983553_141984802_141984934_141987732
transcript_114556.known	chr5	-	2319	8	FSM	ENSG00000113552.16	ENST00000500692.6	2319	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	336.025266299778	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-3	True	NA	-29	True	ATTAAA	-16	NA	142013030	142000673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012340_142012994
transcript_114560.known	chr5	-	2267	7	FSM	ENSG00000113552.16	ENST00000311337.11	2267	7	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_6	121.525946017941	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCATTTGTGGATTTGA	0	True	NA	-26	True	ATTAAA	-19	NA	142013027	142000670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_114562.known	chr5	+	3574	8	FSM	ENSG00000131507.11	ENST00000253814.6	3574	8	0	0	0	0	multi-exon	TRUE	canonical	3	479	junction_7	32.1951954838746	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATGAATATCTTTACT	-14	True	NA	NA	False	AATAAA	-34	NA	142108778	142154440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_142109038_142131807_142131896_142132211_142132343_142135729_142135818_142137733_142137859_142140562_142140630_142144570_142144677_142151730
transcript_11457.nic	chr1	+	1294	6	NIC	ENSG00000158793.14	novel	1485	7	NA	NA	-13	-126	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	84.5600378429433	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGACATCGCCTTT	2583	False	NA	13	True	CATAAA	-4	NA	161118072	161121067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161118179_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_114573.known	chr5	+	539	3	FSM	ENSG00000231185.8	ENST00000515288.2	691	3	0	152	0	-152	multi-exon	FALSE	canonical	2	3	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTGGGTTTTTATGCTT	3	True	NA	NA	False	NA	NA	NA	142325297	142353621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_142325371_142345415_142345486_142353225
transcript_114578.known	chr5	-	4938	3	FSM	ENSG00000187678.10	ENST00000344120.4	4938	3	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGTTTGTGTGTTT	53	False	NA	-7	True	TATAAA	-34	NA	142325001	142310426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142315156_142319743_142319795_142324843
transcript_114579.nnic	chr5	-	413	3	NNC	ENSG00000187678.10	novel	546	2	NA	NA	0	66044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTCTATGGTATTTTCT	0	True	NA	-1	True	AATAAA	-19	NA	142325021	142244382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_142244531_142245761_142245849_142324843
transcript_114580.known	chr5	-	4904	2	FSM	ENSG00000187678.10	ENST00000434127.3	4904	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGTGTGTTTGTGTG	0	True	NA	-10	True	TATAAA	-31	NA	142325021	142310429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142315156_142324843
transcript_114581.known	chr5	-	958	3	FSM	ENSG00000113578.18	ENST00000489937.5	958	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTTCTAAATGCCCAGT	NA	False	NA	NA	False	NA	NA	NA	142698052	142595160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142595485_142613958_142614162_142697621
transcript_114582.nnic	chr5	+	451	2	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTAAGATAAAGCAGCAAG	NA	False	NA	NA	False	AATAAA	-19	NA	142703193	142705771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_142703491_142705617
transcript_114583.nnic	chr5	+	798	2	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGTATAAATGAGCCAT	0	True	NA	NA	False	NA	NA	NA	142703352	142706277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_142703491_142705617
transcript_11459.known	chr1	+	1749	6	FSM	ENSG00000158793.14	ENST00000368007.8	1749	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	89.7275877308646	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	7	True	NA	4	True	AATAAA	-13	NA	161118116	161121193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118552_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_114592.nnic	chr5	+	1509	5	NNC	ENSG00000236714.3	novel	1601	6	NA	NA	-12883	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_2	3.77491721763537	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGATTCCTCCATAATGAA	NA	False	NA	NA	False	AATAAA	-14	NA	142703345	142759733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_142703491_142745207_142745719_142756733_142756831_142757826_142757935_142759085
transcript_114601.nnic	chr5	+	283	2	NNC	ENSG00000236714.3	novel	2752	5	NA	NA	-12883	-14062	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCCCTAGAGTGAGG	NA	False	NA	NA	False	GATAAA	-13	NA	142703345	142745345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_142703491_142745207
transcript_114605.known	chr5	-	2594	9	FSM	ENSG00000113580.15	ENST00000503201.1	2594	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	4.12121038045863	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGTTGTTTTATTT	6	True	NA	NA	False	TATAAA	-19	NA	143404544	143281810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143404375
transcript_114609.known	chr5	-	3144	6	FSM	ENSG00000145817.17	ENST00000274496.10	3144	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	30.0039997333689	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTATGTGGCGCTTTTTT	-26	True	NA	-4	True	ATTAAA	-25	NA	144170659	144158161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170534
transcript_114611.known	chr5	-	2255	6	FSM	ENSG00000145817.17	ENST00000448443.6	2255	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	115.929978866555	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGTGTTATTGAAT	3	True	NA	-4	True	ATTAAA	-15	NA	144170630	144159272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170283
transcript_114615.known	chr5	-	684	5	FSM	ENSG00000145817.17	ENST00000519064.5	684	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	116.912360338845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGGAAGGACAGCAACT	-2	True	NA	NA	False	NA	NA	NA	144170635	144160477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144170534
transcript_114618.known	chr5	-	793	4	FSM	ENSG00000145817.17	ENST00000508754.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	25.2234458831902	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAACAACAGGTATAGC	-7	True	NA	NA	False	ATTAAA	-28	NA	144170640	144163862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_144164257_144165431_144165605_144169845_144169966_144170534
transcript_11462.known	chr1	-	954	6	FSM	ENSG00000158796.17	ENST00000463227.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	130.202304127078	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGCGTGACTACAT	304	False	NA	NA	False	NA	NA	NA	161132476	161122332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132390
transcript_114627.nnic	chr5	+	1485	3	Antisense	novelGene_ENSG00000251031.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAGAAAAAAGAAAAAAA	NA	False	NA	NA	False	AAAAAG	-1	NA	144615485	144888659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_144616114_144758615_144758680_144887866
transcript_11463.known	chr1	-	1527	6	FSM	ENSG00000158796.17	ENST00000490843.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	141.779547185058	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTATGAGAGCTCTTAA	-9	True	NA	NA	False	NA	NA	NA	161132667	161121786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130844_161132550
transcript_114630.known	chr5	-	1102	8	FSM	ENSG00000186314.12	ENST00000394450.6	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	17.38988681002	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATGTAAGATATGTGT	17	True	NA	-14	True	AATAAA	-9	NA	145835336	145760255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145825997_145826201_145835176
transcript_114632.known	chr5	-	4817	7	FSM	ENSG00000186314.12	ENST00000683046.1	4817	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	8.40138877408571	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTGCATTCTAA	11	True	NA	-2	True	AATAAA	-15	NA	145835342	145756343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145835176
transcript_114635.known	chr5	-	338	2	FSM	ENSG00000186314.12	ENST00000505097.1	338	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGGTAACTTGTGTAAA	120	False	NA	NA	False	NA	NA	NA	145835233	145834651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_145834933_145835176
transcript_114636.known	chr5	+	3004	10	FSM	ENSG00000156463.18	ENST00000359120.9	3004	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.3778816176703	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCCTGAGTATGCTCCAC	-7	True	NA	NA	False	AATAAA	-15	NA	145936577	146063292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_145936695_145937822_145938307_146000057_146000328_146004057_146004154_146013746_146014062_146047771_146047864_146049074_146049246_146055980_146056214_146059865_146060225_146062425
transcript_114638.known	chr5	-	4669	32	FSM	ENSG00000133706.19	ENST00000674277.1	4669	32	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_31	373.602071466916	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-15	True	NA	-29	True	AATAAA	-14	NA	146182645	146113042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182561
transcript_114639.known	chr5	-	7140	32	FSM	ENSG00000133706.19	ENST00000674174.1	7140	32	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_31	296.621633297827	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	146182696	146110565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182621
transcript_114650.known	chr5	-	4768	32	FSM	ENSG00000133706.19	ENST00000674398.1	4768	32	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	286.355967031103	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-40	True	NA	-29	True	AATAAA	-14	NA	146182670	146113042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_114651.known	chr5	-	2533	6	FSM	ENSG00000133706.19	ENST00000505223.6	2533	6	0	0	0	0	multi-exon	FALSE	canonical	3	1232	junction_1	127.422133085269	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAATGGAAAAATAAAGC	-20	True	NA	NA	False	NA	NA	NA	146182650	146162527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_114652.known	chr5	+	3311	20	FSM	ENSG00000275740.1	ENST00000506502.2	3311	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	17.1574103903223	2128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCTCTAAGGCACATTT	-16	True	NA	NA	False	NA	NA	NA	146203549	146339251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146314895_146315019_146339102
transcript_114656.known	chr5	+	6537	21	FSM	ENSG00000091009.8	ENST00000265271.7	6537	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	7.09559722644965	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	-1	True	NA	17	True	NA	NA	NA	146203604	146289223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146284621_146284733_146285946
transcript_114657.nic	chr5	+	2762	17	ISM	ENSG00000091009.8	ENST00000265271.7	6537	21	-43	19772	-43	5932	5prime_fragment	FALSE	canonical	3	35	junction_9	6.10807610872687	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAAACCAGAAGAAAGAG	-4	True	NA	21	True	AAAACA	-5	NA	146203561	146269451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419
transcript_114659.known	chr5	+	1984	11	FSM	ENSG00000113649.13	ENST00000507175.5	1984	11	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_5	94.5230659680482	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGATAATAAATAGCTT	-12	True	NA	NA	False	NA	NA	NA	146447310	146480216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_146447409_146455055_146455282_146457182_146457336_146458883_146459338_146463550_146463794_146469543_146469745_146470635_146470749_146471487_146471577_146478492_146478654_146479854_146479912_146480027
transcript_114662.known	chr5	-	3047	1	FSM	ENSG00000173250.3	ENST00000311104.3	3047	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTGTAAAGAAATAAAAAT	NA	False	NA	-55	True	AGTAAA	-36	NA	146516190	146513143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146513100_146516200
transcript_114665.nic	chr5	-	2228	11	NIC	ENSG00000156475.19	novel	2569	10	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_9	76.4397802194643	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTCTTCTTGTTTTGT	5441	False	NA	-5	True	AATAAA	-17	NA	146878949	146589508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
transcript_114668.known	chr5	-	10828	10	FSM	ENSG00000156475.19	ENST00000394411.9	10828	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	72.6530738221203	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCTCTCTCTCTCTCTC	7	True	NA	NA	False	AATAAA	-16	NA	146878757	146580741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878590
transcript_114669.known	chr5	-	2093	10	FSM	ENSG00000156475.19	ENST00000530902.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	40.9281212751222	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	5496	False	NA	0	True	AATAAA	-22	NA	146878894	146589503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878700
transcript_114682.known	chr5	-	567	5	FSM	ENSG00000156475.19	ENST00000532154.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	67.2546466796161	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAATAAGATGGCT	-21	True	NA	NA	False	AATAGA	-8	NA	146878785	146698039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
transcript_114695.nnic	chr5	+	607	3	Antisense	novelGene_ENSG00000156475.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAATGAACTGTTTTAAT	4	True	NA	-39	True	AAAAAG	-4	NA	147042277	147059185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_147042377_147055847_147056031_147058860
transcript_114697.nnic	chr5	+	758	3	Antisense	novelGene_ENSG00000156475.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_2	7	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTCCTGTTAAAAGGCAA	4	True	NA	112	True	TATAAA	-14	NA	147042277	147059336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_147042377_147055847_147056031_147058860
transcript_11470.known	chr1	-	964	5	FSM	ENSG00000158796.17	ENST00000464113.1	964	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	132.737287526904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATCAAGCTGCTGGTA	12	True	NA	NA	False	NA	NA	NA	161132588	161122241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161132550
transcript_114704.nnic	chr5	+	259	2	Antisense	novelGene_ENSG00000156475.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCGGGCATTTTGA	5	True	NA	16	True	AATAAA	-19	NA	147042278	147043551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_147042377_147043390
transcript_11471.known	chr1	+	1485	7	FSM	ENSG00000158793.14	ENST00000368009.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	27.4089401473315	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTCCCAGCCCCATT	-5	True	NA	5	True	AATAAA	-14	NA	161118104	161121194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_114711.nnic	chr5	+	1175	6	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	28	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	35.8139637571716	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	4	True	NA	NA	False	AATAAA	-18	NA	147042277	147097268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164_147095187_147095396_147095521_147096605
transcript_114712.nnic	chr5	+	1236	6	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	28	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	37.880865882395	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	4	True	NA	NA	False	AATAAA	-18	NA	147042277	147097268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164_147095248_147095396_147095521_147096605
transcript_11472.known	chr1	+	2081	7	FSM	ENSG00000158793.14	ENST00000368008.5	2081	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	75.4860178370067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTTGTAATTCTATGC	8	True	NA	NA	False	AATAAA	-20	NA	161118117	161125445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161124140
transcript_114723.nnic	chr5	+	1112	5	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	28	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	37.3388202813104	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	4	True	NA	NA	False	AATAAA	-18	NA	147042277	147097268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164_147095248_147096605
transcript_114724.nnic	chr5	+	1385	5	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	28	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_4	31.42053468673	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	4	True	NA	NA	False	AATAAA	-18	NA	147042277	147097268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164_147095521_147096605
transcript_114730.nnic	chr5	+	1401	4	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	-1041	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	23.4710223230453	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTAGGAGGCTAGTGCAA	4	True	NA	NA	False	AAAAAG	-1	NA	147042277	147096199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164
transcript_114731.nnic	chr5	+	2442	4	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_2	23.4710223230453	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAATAAAATGGGTTAA	4	True	NA	NA	False	NA	NA	NA	147042277	147097240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147042377_147093302_147093462_147093948_147094057_147095164
transcript_114733.nnic	chr5	+	953	4	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50981	28	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	47.8632310744781	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	4	True	NA	NA	False	AATAAA	-18	NA	147042277	147097268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147042377_147093948_147094057_147095164_147095248_147096605
transcript_114740.nnic	chr5	+	1117	3	NNC	ENSG00000286468.1	novel	2387	3	NA	NA	-50980	28	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGTTACTTTCAATTAATA	5	True	NA	NA	False	AATAAA	-18	NA	147042278	147097268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147042377_147095164_147095521_147096605
transcript_114743.known	chr5	+	2387	3	FSM	ENSG00000286468.1	ENST00000660170.1	2387	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	28.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCAATAAAATGGGTTAA	NA	False	NA	NA	False	NA	NA	NA	147093258	147097240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147093462_147093948_147094057_147095164
transcript_114749.known	chr5	+	798	7	FSM	ENSG00000169302.16	ENST00000626951.2	798	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	7.26674311886388	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGCTAAGTCTCCTGT	41	True	NA	NA	False	ATTAAA	-19	NA	147235105	147348830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147235200_147239538_147239687_147278123_147278180_147279246_147279399_147323897_147324072_147343005_147343044_147348694
transcript_114750.nic	chr5	+	1100	7	ISM	ENSG00000169302.16	ENST00000306304.10	2063	11	83	24474	-9	290	5prime_fragment	FALSE	canonical	3	8	junction_6	5.48988969733353	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGCTTAGCACTGTT	-19	True	NA	NA	False	AATAAA	-16	NA	147235045	147351442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_147235200_147239538_147239687_147278123_147278180_147279246_147279399_147323897_147324072_147343005_147343044_147351064
transcript_114753.known	chr5	-	5309	14	FSM	ENSG00000113657.13	ENST00000398514.7	5309	14	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_13	107.979945541074	1870	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATTGTTCTCCAGTCTT	398	False	NA	-18	True	ATTAAA	-17	NA	147453959	147390810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147453548
transcript_114769.known	chr5	+	831	5	FSM	ENSG00000280780.3	ENST00000627433.3	2074	5	33	1210	13	-5	multi-exon	FALSE	canonical	3	83	junction_4	59.6741149913428	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAGAGCACTGGACAAA	32	False	NA	NA	False	NA	NA	NA	147560026	147660809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147636276_147636406_147660452
transcript_114770.known	chr5	+	720	4	FSM	ENSG00000280780.3	ENST00000630514.2	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	85.2655981168386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCACTGGACAAAAGGTA	19	False	NA	NA	False	NA	NA	NA	147560013	147660814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147560138_147594359_147594478_147595424_147595541_147660452
transcript_114771.known	chr5	-	9153	22	FSM	ENSG00000176049.16	ENST00000616793.5	9153	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	19.8324043685719	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTTTCATTGTTTAT	6	True	NA	NA	False	AATAAA	-22	NA	147782728	147585437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_147591687_147601740_147601812_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_114773.known	chr5	-	6001	21	FSM	ENSG00000176049.16	ENST00000265272.9	6001	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	8.35224520712844	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCTCTATTATCCAT	NA	False	NA	NA	False	AATAAA	-20	NA	147782775	147588565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_147591687_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_114783.nnic	chr5	+	761	4	NNC	ENSG00000287630.1	novel	2375	2	NA	NA	-4178	-1958	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.49443825784929	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCCTCTGTAAAGTTTT	NA	False	NA	1	True	AATAAA	-18	NA	147721372	147726506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147721531_147722232_147722310_147725441_147725581_147726119
transcript_114786.nnic	chr5	-	692	6	NNC	ENSG00000164266.11	novel	413	4	NA	NA	-37204	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.5213633723318	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	5453	False	NA	NA	False	AATAAA	-16	NA	147868875	147824581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147850463_147850543_147868772
transcript_114787.nnic	chr5	-	790	6	Fusion	ENSG00000164266.11_ENSG00000288774.1	novel	413	4	NA	NA	201	0	multi-exon	FALSE	canonical	2	2	junction_5	3.00665927567458	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	8024	False	NA	NA	False	AATAAA	-16	NA	147874130	147824581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147850463_147850543_147873929
transcript_114791.nnic	chr5	-	642	5	NNC	ENSG00000164266.11	novel	413	4	NA	NA	-37233	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	3.89711431702997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	5424	False	NA	NA	False	AATAAA	-16	NA	147868904	147824581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147868772
transcript_114794.nnic	chr5	-	643	5	NNC	ENSG00000164266.11	novel	413	4	NA	NA	-37201	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.89711431702997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	5456	False	NA	NA	False	AATAAA	-16	NA	147868872	147824581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831802_147868772
transcript_114797.known	chr5	-	413	4	FSM	ENSG00000164266.11	ENST00000296695.10	413	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	0	True	NA	NA	False	AATAAA	-16	NA	147831671	147824581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522
transcript_114798.known	chr5	-	244	2	FSM	ENSG00000164266.11	ENST00000505722.1	244	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTGCTTTTTCCTCAAA	3541	False	NA	NA	False	AATAAA	-26	NA	147828130	147824571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_147824707_147828021
transcript_11482.known	chr1	+	888	6	FSM	ENSG00000143222.12	ENST00000368003.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_5	70.9743615681043	6972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	-8	True	NA	24	True	AATAAA	-18	NA	161153977	161158856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
transcript_11483.known	chr1	+	617	5	FSM	ENSG00000143222.12	ENST00000483191.5	617	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	415.779388618532	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGCACAGGGAAGGGA	-2	True	NA	NA	False	AAGAAA	-37	NA	161153983	161158682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158411
transcript_114858.nnic	chr5	+	2029	4	NNC	ENSG00000164265.9	novel	672	3	NA	NA	-518	0	at_least_one_novel_splicesite	FALSE	canonical	3	315	junction_1	282.35556779824	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870163	147882191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147871680_147872176_147872322_147881445_147881649_147882026
transcript_11487.known	chr1	+	2315	14	FSM	ENSG00000143258.16	ENST00000368002.8	2315	14	0	0	0	0	multi-exon	FALSE	non_canonical	3	76	junction_1	36.9440645479818	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	5	True	NA	3	True	AATAAA	-16	NA	161159499	161165723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_11488.nic	chr1	+	2352	14	NIC	ENSG00000143258.16	novel	2315	14	NA	NA	0	0	intron_retention	FALSE	non_canonical	3	9	junction_1	50.4371423203554	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	5	True	NA	3	True	AATAAA	-16	NA	161159499	161165723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161159679_161160328_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_114913.nnic	chr5	+	1055	3	NNC	ENSG00000164265.9	novel	440	3	NA	NA	-407	0	at_least_one_novel_splicesite	FALSE	canonical	3	99	junction_1	453.5	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147870274	147882191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147870962_147881445_147881649_147882026
transcript_114918.known	chr5	+	440	3	FSM	ENSG00000164265.9	ENST00000504320.5	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	472.5	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	NA	False	NA	12	True	AATAAA	-12	NA	147870681	147882190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147870755_147881445_147881649_147882026
transcript_114949.known	chr5	+	672	3	FSM	ENSG00000164265.9	ENST00000514688.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_1	185.5	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	NA	False	NA	13	True	AATAAA	-13	NA	147872017	147882191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147872322_147881445_147881649_147882026
transcript_114950.known	chr5	+	549	3	FSM	ENSG00000164265.9	ENST00000507160.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	455.5	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	NA	False	NA	12	True	AATAAA	-12	NA	147871497	147882190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147871680_147881445_147881649_147882026
transcript_114963.known	chr5	-	5039	3	FSM	ENSG00000247199.6	ENST00000661718.1	5039	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGAGAACACTTGGACAC	-18	True	NA	NA	False	NA	NA	NA	148383886	148326729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_148331237_148378701_148378846_148383498
transcript_114966.known	chr5	-	1595	2	FSM	ENSG00000247199.6	ENST00000663936.2	1671	2	0	76	0	-76	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTTATATATTAAATATA	-39	True	NA	NA	False	NA	NA	NA	148383907	148377659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_148378846_148383498
transcript_114967.nnic	chr5	-	585	2	NNC	ENSG00000247199.6	novel	2991	5	NA	NA	52593	-5430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAGTTGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	148231097	148093659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_148093743_148230595
transcript_114968.nnic	chr5	+	580	3	NNC	ENSG00000214510.10	novel	1022	6	NA	NA	12226	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTGTATTGATTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	148281085	148286254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_148281283_148282103_148282232_148285999
transcript_114969.known	chr5	+	4132	22	FSM	ENSG00000145868.17	ENST00000394370.7	4132	22	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_15	22.306563304102	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	2	True	NA	21	True	AATAAA	-18	NA	148384001	148442836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427723_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_11497.known	chr1	+	2195	13	FSM	ENSG00000143258.16	ENST00000289865.12	2195	13	0	0	0	0	multi-exon	TRUE	non_canonical	3	111	junction_1	25.0780725380206	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	-16	True	NA	3	True	AATAAA	-16	NA	161159478	161165723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_114971.known	chr5	+	4401	22	FSM	ENSG00000145868.17	ENST00000340253.10	4401	22	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_15	15.5061248962161	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	2	True	NA	21	True	AATAAA	-18	NA	148383957	148442836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427948_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_114973.known	chr5	+	3680	21	FSM	ENSG00000145868.17	ENST00000296701.10	3680	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	22.8111266709911	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTTTCTCTTGCCTT	NA	False	NA	12	True	AATAAA	-9	NA	148383934	148442827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_114975.nic	chr5	+	1397	9	ISM	ENSG00000145868.17	ENST00000340253.10	4401	22	-3	31915	3	53	5prime_fragment	FALSE	canonical	3	67	junction_7	12.3636311413759	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGATTTTTTTTTCC	-1	True	NA	6	True	AATAAA	-16	NA	148383954	148410921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634
transcript_114976.nic	chr5	+	1085	6	ISM	ENSG00000145868.17	ENST00000340253.10	4401	22	-3	37807	3	2464	5prime_fragment	FALSE	canonical	3	75	junction_1	9.09065454189081	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTCAGAATATCTCTA	-1	True	NA	NA	False	NA	NA	NA	148383954	148405029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684
transcript_114979.known	chr5	+	761	3	FSM	ENSG00000145868.17	ENST00000509411.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTGCCATTTTTGTA	9	True	NA	NA	False	ACTAAA	-20	NA	148384008	148399537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_148384040_148394713_148394905_148398998
transcript_11498.known	chr1	+	1150	5	FSM	ENSG00000143258.16	ENST00000492950.5	1150	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	47.013295991666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCCCAAGAGCTCACTGA	1242	False	NA	NA	False	NA	NA	NA	161159449	161162368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269
transcript_114980.known	chr5	+	2013	1	FSM	ENSG00000169252.6	ENST00000305988.6	2013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGCACCTGTTTCT	-9	True	NA	4	True	AATAAA	-14	NA	148826610	148828623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_148826600_148828600
transcript_114981.known	chr5	+	3240	10	FSM	ENSG00000157510.14	ENST00000513665.1	3240	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.61743318211757	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTGACTCACAAGCC	NA	False	NA	3	True	ATTAAA	-32	NA	149315639	149341802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149315915_149316150_149316304_149317728_149317941_149319581_149319728_149320390_149320464_149322605_149322718_149329665_149329831_149332694_149332874_149335593_149335723_149340006
transcript_114984.known	chr5	+	4020	4	FSM	ENSG00000164284.15	ENST00000329271.8	4020	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	11.6141675934562	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	-11	True	NA	17	True	AATAAA	-22	NA	149345498	149354583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149345617_149348271_149348426_149349653_149349736_149350917
transcript_114986.known	chr5	+	4109	4	FSM	ENSG00000164284.15	ENST00000507562.1	4109	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	148.553768791715	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	109	False	NA	17	True	AATAAA	-22	NA	149345618	149354583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149345826_149348271_149348426_149349653_149349736_149350917
transcript_114988.known	chr5	+	1006	3	FSM	ENSG00000164284.15	ENST00000416916.2	1006	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	143	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAGGGATTGGTTCAA	-8	True	NA	NA	False	AAAAAG	-3	NA	149345501	149351654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149345617_149348271_149348426_149350917
transcript_114991.known	chr5	-	4902	10	FSM	ENSG00000113712.19	ENST00000657001.1	4902	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	457.11505426917	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGCTAGGAGCAGTG	109	False	NA	NA	False	NA	NA	NA	149551397	149493361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_114992.known	chr5	-	2413	11	FSM	ENSG00000113712.19	ENST00000661952.1	2413	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	699.406205291317	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTATTAAATAAAAATCTC	7	True	NA	41	True	TTTAAA	-24	NA	149551471	149495939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149515668_149515727_149517793_149517878_149520289_149520389_149550074_149550182_149550841
transcript_114993.known	chr5	-	2570	11	FSM	ENSG00000113712.19	ENST00000515768.6	2570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	611.834650865738	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTCTTTCATTTTTTT	102	False	NA	NA	False	AAAAAG	-24	NA	149551404	149495784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_114994.known	chr5	-	1772	9	FSM	ENSG00000113712.19	ENST00000504676.5	1772	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	482.002009850581	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTTATTTTGAAATG	10	True	NA	-9	True	GATAAA	-35	NA	149550299	149496053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074
transcript_114995.known	chr5	+	4803	11	FSM	ENSG00000155846.17	ENST00000394320.7	4803	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	6.19758017293847	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATCAATG	-3	True	NA	NA	False	NA	NA	NA	149730300	149847704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149730421_149820432_149820607_149826672_149826886_149830766_149830884_149832655_149833779_149834673_149834711_149835300_149835366_149836262_149837074_149840040_149840117_149842255_149842378_149845759
transcript_114998.known	chr5	+	8054	3	FSM	ENSG00000155850.9	ENST00000286298.5	8054	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACTCTGTATTTAAATT	11	True	NA	NA	False	AATAAA	-18	NA	149960757	149987400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149960980_149977627_149978352_149980292
transcript_115000.nnic	chr5	+	1468	2	Genic_Genomic	ENSG00000214485.6	novel	747	1	NA	NA	-72784	85	multi-exon	FALSE	canonical	0	0	junction_1	0	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGAGCTTCAAACTACA	NA	False	NA	NA	False	AATAAA	-43	NA	150021517	150095133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_150022070_150094217
transcript_115001.nnic	chr5	+	1307	2	Genic_Genomic	ENSG00000214485.6	novel	747	1	NA	NA	-72782	86	multi-exon	FALSE	canonical	0	0	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAGCTTCAAACTACAT	NA	False	NA	NA	False	AATAAA	-44	NA	150021519	150095134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_150021973_150094280
transcript_115002.nnic	chr5	+	1500	2	Genic_Genomic	ENSG00000214485.6	novel	747	1	NA	NA	-72782	85	multi-exon	FALSE	canonical	0	0	junction_1	0	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGAGCTTCAAACTACA	NA	False	NA	NA	False	AATAAA	-43	NA	150021519	150095133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_150022072_150094185
transcript_115003.known	chr5	-	3493	2	FSM	ENSG00000164296.7	ENST00000296736.4	3493	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTACATATTTTAAAT	-8	True	NA	NA	False	AATAAA	-25	NA	150000654	149993117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149996430_150000473
transcript_115005.known	chr5	-	2429	2	FSM	ENSG00000164296.7	ENST00000515406.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTTGAGCCAATTTAAG	-8	True	NA	NA	False	AATAAA	-15	NA	150000654	149994727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149996430_149999927
transcript_115006.known	chr5	-	657	2	FSM	ENSG00000164296.7	ENST00000532987.1	657	2	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGATTTGGCTCTTG	-7	True	NA	NA	False	AATAAA	-27	NA	150000653	149999839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150000317_150000473
transcript_115007.known	chr5	+	747	1	FSM	ENSG00000214485.6	ENST00000468161.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTATTT	21	False	NA	NA	False	AATGAA	-5	NA	150094301	150095048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150094300_150095000
transcript_115009.known	chr5	-	822	3	FSM	ENSG00000113721.14	ENST00000517488.1	822	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCCCCTTTCTGGCCT	2627	False	NA	NA	False	NA	NA	NA	150155627	150134749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150135017_150135554_150135879_150155396
transcript_115010.known	chr5	+	4800	26	FSM	ENSG00000070814.22	ENST00000427724.7	4800	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	293.131981196184	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCCTCTCGTCAGTTCT	16	True	NA	-63	True	NA	NA	NA	150357718	150400206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_115011.known	chr5	+	4832	26	FSM	ENSG00000070814.22	ENST00000323668.11	4832	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	287.527250882416	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGGCACATGTTTCTTG	-31	True	NA	39	True	AATAAA	-34	NA	150357671	150400308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_115014.known	chr5	+	5095	27	FSM	ENSG00000070814.22	ENST00000377797.7	5095	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	255.477615712566	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGGCACATGTTTCTT	NA	False	NA	38	True	AATAAA	-33	NA	150357638	150400307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392707_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_115020.known	chr5	+	3526	19	FSM	ENSG00000070814.22	ENST00000513538.2	3526	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	354.334139053472	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTAACTCCCTGTATT	1	True	NA	3	True	AGTAAA	-17	NA	150357703	150384253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383064_150383173_150383737
transcript_115021.known	chr5	+	3400	18	FSM	ENSG00000070814.22	ENST00000394269.7	3400	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	307.560430948328	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGGTAACTCCCTG	15	True	NA	-1	True	AGTAAA	-13	NA	150357717	150384249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383737
transcript_11503.known	chr1	+	1686	13	FSM	ENSG00000143224.18	ENST00000352210.9	1686	13	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	89.4029579426144	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	-47	True	NA	10	True	AATAAA	-16	NA	161166409	161171218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166612_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_115035.known	chr5	-	3092	9	FSM	ENSG00000019582.17	ENST00000009530.13	1653	9	159	-1598	0	1596	multi-exon	FALSE	canonical	2	21	junction_2	178.858708202872	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGCGTCCTGTGTTGG	2	True	NA	NA	False	AATACA	-18	NA	150412751	150400040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_115037.known	chr5	-	1270	8	FSM	ENSG00000019582.17	ENST00000353334.11	1270	8	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	41.0763351106504	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTAGAATAAAAGGT	3	True	NA	-38	True	NA	NA	NA	150412750	150401669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150402251_150402562_150402626_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_115047.known	chr5	-	2771	8	FSM	ENSG00000019582.17	ENST00000523813.2	2771	8	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	183.352008943653	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGGTAGTAATTAGAAC	NA	False	NA	-26	True	NA	NA	NA	150412969	150401657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150406322_150406880_150406961_150407151_150407325_150412624
transcript_115048.known	chr5	-	1138	6	FSM	ENSG00000019582.17	ENST00000377795.7	1138	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	172.914545368514	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTCCTGGCTCTTCT	135	False	NA	-5	True	AATAAA	-18	NA	150412769	150401636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150402251_150402562_150402626_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_115056.known	chr5	-	620	5	FSM	ENSG00000164587.13	ENST00000642507.1	620	5	0	0	0	0	multi-exon	FALSE	canonical	2	517	junction_4	11683.0022334801	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAACAAGATTCCTCAA	320	False	NA	1	True	NA	NA	NA	150449436	150444291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449268
transcript_115064.known	chr5	-	2146	5	FSM	ENSG00000164587.13	ENST00000407193.7	2146	5	0	0	0	0	multi-exon	FALSE	canonical	3	22852	junction_4	3219.53416661479	152689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	0	True	NA	NA	False	AATAAA	-41	NA	150449739	150442634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449702
transcript_115065.known	chr5	-	712	5	FSM	ENSG00000164587.13	ENST00000312037.6	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	2915	junction_4	10676.4559516489	59197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-5	True	NA	-15	True	AATAAA	-16	NA	150449691	150444237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449485
transcript_115066.known	chr5	-	3119	3	FSM	ENSG00000164587.13	ENST00000519690.1	3119	3	0	0	0	0	multi-exon	FALSE	canonical	3	26120	junction_1	2388.5	2161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	29	False	NA	-15	True	AATAAA	-16	NA	150449727	150444237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150445608_150445686_150446801
transcript_115067.known	chr5	-	669	5	FSM	ENSG00000164587.13	ENST00000518139.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	13772.1365354109	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	2021	False	NA	-15	True	AATAAA	-16	NA	150447735	150444237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150444478_150444642_150445608_150445686_150446801_150446964_150447584
transcript_115068.known	chr5	-	368	3	FSM	ENSG00000254333.1	ENST00000519040.1	368	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCATTTCCCCTTTTA	1017	False	NA	NA	False	AATAAA	-7	NA	150485968	150475530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150475760_150485228_150485300_150485900
transcript_115072.nnic	chr5	-	792	4	NNC	ENSG00000250309.2	novel	425	2	NA	NA	144	5074	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	13.29995822884	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672246	150665583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_150666032_150668116_150668270_150670149_150670210_150672115
transcript_115074.nic	chr5	+	711	3	ISM	ENSG00000164591.14	ENST00000297130.4	3445	7	-38	8469	-38	10	5prime_fragment	FALSE	canonical	2	3	junction_1	1	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCTAAGA	-13	True	NA	NA	False	NA	NA	NA	150660843	150670896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_150661080_150662940_150663003_150670483
transcript_115076.known	chr5	+	665	3	FSM	ENSG00000164591.14	ENST00000521300.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGGGCCTTCACACAC	55	False	NA	NA	False	NA	NA	NA	150671657	150676957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150671909_150672339_150672503_150676706
transcript_115078.nnic	chr5	-	939	3	Genic_Genomic	ENSG00000250309.2	novel	425	2	NA	NA	-80	5074	multi-exon	TRUE	canonical	0	0	junction_2	4.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672470	150665583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_-_150666032_150670149_150670210_150672039
transcript_115079.nnic	chr5	-	879	3	NNC	ENSG00000250309.2	novel	425	2	NA	NA	-96	5074	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	1.5	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672486	150665583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_150666032_150670149_150670210_150672115
transcript_115080.known	chr5	+	605	2	FSM	ENSG00000164591.14	ENST00000520112.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTGTAGCCCTAGCCTG	454	False	NA	NA	False	NA	NA	NA	150672056	150676865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150672503_150676706
transcript_115084.known	chr5	-	2299	11	FSM	ENSG00000086589.12	ENST00000199814.9	2299	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	33.3772377526961	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTCATGGGTTTATT	-21	True	NA	-9	True	ATTAAA	-17	NA	150701062	150690791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_115088.nic	chr5	-	1060	9	ISM	ENSG00000086589.12	ENST00000199814.9	2299	11	-44	2488	-29	-1761	5prime_fragment	FALSE	canonical	3	265	junction_1	30.3600786395556	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAGATGGAACTACAGA	NA	False	NA	NA	False	AAGAAA	-3	NA	150701106	150693279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_115091.known	chr5	-	4116	13	FSM	ENSG00000132912.13	ENST00000447998.7	4116	13	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_10	20.9775011752009	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCCACTCATCACCT	-9	True	NA	NA	False	AATATA	-19	NA	150759017	150708439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
transcript_115095.nic	chr5	-	1032	3	ISM	ENSG00000132912.13	ENST00000446090.6	1737	14	2	42014	2	-16563	5prime_fragment	FALSE	canonical	3	123	junction_2	25	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTTTAAAGATAAAAATGA	198	False	NA	NA	False	NA	NA	NA	150759033	150752871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_150753658_150756416_150756488_150758858
transcript_115096.nic	chr5	-	618	2	ISM	ENSG00000132912.13	ENST00000517421.1	576	6	62	19736	2	-19736	5prime_fragment	FALSE	canonical	3	123	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGACACATGAAATTAA	198	False	NA	NA	False	NA	NA	NA	150759033	150756044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_150756488_150758858
transcript_115097.known	chr5	+	1521	2	FSM	ENSG00000256235.3	ENST00000526627.2	1521	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGAGGTCTTTCTTT	2	True	NA	23	True	AATAAA	-14	NA	150778756	150796734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150778973_150795429
transcript_1151.known	chr1	-	9850	42	FSM	ENSG00000116254.18	ENST00000262450.8	9850	42	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.46666306130467	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAGGCTTTTTCTTTTTA	-11	True	NA	2	True	AATAAA	-21	NA	6180321	6101786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6105428_6106233_6106288_6106394_6106510_6106615_6106780_6109794_6109991_6110393_6110527_6111774_6111884_6112139_6112278_6112908_6112999_6121104_6121238_6121493_6121574_6123947_6124108_6124516_6124662_6125099_6125234_6125523_6125613_6125765_6125859_6126571_6126747_6128045_6128219_6128498_6128610_6128837_6129070_6130203_6130329_6131630_6131749_6134127_6134260_6134717_6134860_6135229_6135404_6136516_6136639_6136727_6136866_6142127_6142329_6142413_6142606_6143822_6143932_6144023_6144156_6146211_6146424_6146664_6146872_6148853_6149076_6149245_6149413_6151031_6151156_6152411_6152537_6154659_6154899_6155598_6155718_6159335_6159516_6168149_6168278_6179944
transcript_115101.known	chr5	-	3256	6	FSM	ENSG00000145908.13	ENST00000394226.2	3256	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	46.1415214313529	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	0	True	NA	-21	True	CATAAA	-21	NA	150904978	150894398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150896970_150898057_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_115102.nnic	chr5	-	3470	6	NIC	ENSG00000145908.13	novel	3258	6	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	53.664140727305	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-9	False	NA	-21	True	CATAAA	-21	NA	150904987	150894398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_150896974_150898057_150898185_150898427_150898555_150903140_150903384_150903863_150903978_150904703
transcript_115104.known	chr5	-	3226	5	FSM	ENSG00000145908.13	ENST00000418587.6	3226	5	0	0	0	0	multi-exon	FALSE	non_canonical	1	7	junction_1	58.5619330282053	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-5	True	NA	-14	True	CATAAA	-28	NA	150904983	150894391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903863_150903978_150904703
transcript_115105.known	chr5	-	4155	5	FSM	ENSG00000145908.13	ENST00000427179.5	4155	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	20.8626460450251	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	189	False	NA	-21	True	CATAAA	-21	NA	150904789	150894398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_115108.nic	chr5	-	585	3	NIC	ENSG00000145908.13	novel	3323	7	NA	NA	75	-8714	intron_retention	FALSE	canonical	3	22	junction_1	53.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTTGGTTTTTCATA	6	True	NA	NA	False	TTTAAA	-12	NA	150904903	150903112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_150903384_150903863_150903978_150904703
transcript_115109.nic	chr5	-	467	3	ISM	ENSG00000145908.13	ENST00000274599.10	3258	6	-7	8715	-4	-8715	5prime_fragment	FALSE	canonical	3	75	junction_1	27	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCTTTGGTTTTTCAT	-9	False	NA	NA	False	TTTAAA	-11	NA	150904987	150903113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_150903183_150903863_150903978_150904703
transcript_115110.nic	chr5	-	1149	2	ISM	ENSG00000145908.13	ENST00000418587.6	3226	5	-4	8721	-4	-8714	5prime_fragment	FALSE	canonical	3	129	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTTGGTTTTTCATA	-9	False	NA	NA	False	TTTAAA	-12	NA	150904987	150903112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_150903978_150904703
transcript_115114.known	chr5	+	612	4	FSM	ENSG00000211445.13	ENST00000517973.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	242.162938718725	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACTTTGTTCAGGAAG	15	False	NA	NA	False	NA	NA	NA	151020605	151028166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151020742_151026899_151027018_151027431_151027532_151027908
transcript_115115.known	chr5	+	1603	5	FSM	ENSG00000211445.13	ENST00000388825.9	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_4	58.7468084239476	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCCTACTGTGTGTGG	0	True	NA	16	True	AGTAAA	-16	NA	151020590	151028988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908
transcript_115116.known	chr5	+	1478	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	237.583332748743	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGCCTACTGTGTGTG	-2	True	NA	15	True	AGTAAA	-15	NA	151020588	151028987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908_151028777_151028902
transcript_115117.known	chr5	-	2935	18	FSM	ENSG00000145901.16	ENST00000389378.6	2935	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	31.987346114029	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGACTCATGTTCA	6594	False	NA	-10	True	CATAAA	-19	NA	151081084	151029946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151030748_151032286_151032401_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_115118.known	chr5	-	2200	18	FSM	ENSG00000145901.16	ENST00000518977.5	2200	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	34.1075035631158	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTACACCAGTCCCTGAA	-46	True	NA	NA	False	NA	NA	NA	151081074	151030580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151030674_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_115119.known	chr5	-	2680	17	FSM	ENSG00000145901.16	ENST00000520931.5	2680	17	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_16	34.1745862264637	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	12	True	NA	-8	True	CATAAA	-21	NA	151081016	151029944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151080879
transcript_115122.known	chr5	-	2889	26	FSM	ENSG00000197043.14	ENST00000354546.10	2889	26	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	36.5208105057924	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTGAGGGCCTCTGT	-12	True	NA	NA	False	AATAAA	-27	NA	151157779	151100705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151110626_151110645_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151147883_151147927_151157679
transcript_115126.known	chr5	-	899	2	FSM	ENSG00000197043.14	ENST00000519610.1	899	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGCTCCAGCATCTATA	6	True	NA	NA	False	ACTAAA	-29	NA	151157761	151154884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151155702_151157679
transcript_115128.known	chr5	-	248	2	FSM	ENSG00000254298.1	ENST00000523781.1	248	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGTTTCTCAACAAAG	NA	False	NA	NA	False	GATAAA	-21	NA	151158462	151158105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151158319_151158427
transcript_115129.known	chr5	-	3398	9	FSM	ENSG00000198624.13	ENST00000355417.7	3398	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.20512764713233	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGACTTTTGTGTTT	-8	True	NA	-8	True	AAAAAG	-17	NA	151224092	151181051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151183615_151184343_151184442_151185421_151185542_151186022_151186125_151187385_151187460_151198996_151199085_151201581_151201689_151205399_151205476_151223922
transcript_115131.nnic	chr5	+	935	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-27	-26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.2179411885173	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCCAGCCTATATAATA	0	True	NA	19	True	AATAAA	-22	NA	151253157	151270414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151267481_151270149
transcript_115132.nnic	chr5	+	899	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	0	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.2179411885173	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGACTGGGAGAAAAA	0	True	NA	-1	True	AATAAA	-26	NA	151253184	151270394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151267492_151270149
transcript_115135.nnic	chr5	+	1836	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-7	-1202	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	68.2179411885173	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	-7	True	NA	21	True	AATAAA	-15	NA	151253177	151269238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268094_151268665
transcript_115136.nnic	chr5	+	1862	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-7	-1202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	68.2179411885173	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	-7	True	NA	21	True	AATAAA	-15	NA	151253177	151269238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268120_151268665
transcript_115138.nnic	chr5	+	2013	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-96	-1202	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	68.2179411885173	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	-2	True	NA	21	True	AATAAA	-15	NA	151253088	151269238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268182_151268665
transcript_115140.known	chr5	+	3603	4	FSM	ENSG00000196743.9	ENST00000357164.4	3603	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	9.7410927974683	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAGTGTTCTTACTATA	0	True	NA	45	True	AATAGA	-5	NA	151253184	151270440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295
transcript_115143.nnic	chr5	+	795	4	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-10	-1202	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	73.4347783183599	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	-10	True	NA	21	True	AATAAA	-15	NA	151253174	151269238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151268911
transcript_115146.nic	chr5	-	1233	7	ISM	ENSG00000186335.9	ENST00000521967.1	1471	9	-3	11082	-3	5646	5prime_fragment	FALSE	canonical	0	0	junction_3	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAGTTTCCTAATCTT	NA	False	NA	NA	False	ATTAAA	-17	NA	151347593	151332966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_151333323_151335328_151335548_151339059_151339145_151342887_151342984_151343509_151343599_151344176_151344268_151347296
transcript_115149.nnic	chr5	+	1326	8	NNC	ENSG00000123643.13	novel	1621	10	NA	NA	-3	-2692	intron_retention	FALSE	canonical	0	0	junction_5	15.8358930977726	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-9	True	NA	NA	False	NA	NA	NA	151447599	151468267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151466552_151466595_151467198_151467284_151467706
transcript_115151.nic	chr5	+	1284	7	ISM	ENSG00000123643.13	ENST00000521925.5	1621	10	-27	11492	-3	-2692	5prime_fragment	FALSE	canonical	3	28	junction_3	4.88762609953839	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-9	True	NA	NA	False	NA	NA	NA	151447599	151468267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706
transcript_115153.nic	chr5	+	753	6	ISM	ENSG00000123643.13	ENST00000521925.5	1621	10	-27	12446	-3	2164	5prime_fragment	FALSE	canonical	3	28	junction_3	5.31413210223457	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACCAGAGCGAGAAT	-9	True	NA	NA	False	AAAAAG	-10	NA	151447599	151467313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198
transcript_115154.nic	chr5	+	1426	5	ISM	ENSG00000123643.13	ENST00000521925.5	1621	10	-27	13802	-3	808	5prime_fragment	FALSE	canonical	3	28	junction_3	5.04975246918104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACCACATTAAAACTATG	-9	True	NA	NA	False	NA	NA	NA	151447599	151465957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073
transcript_115156.nic	chr5	+	1152	2	ISM	ENSG00000123643.13	ENST00000517945.5	552	4	-41	10354	-17	-10354	5prime_fragment	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGGCCCAGAAATCTATT	-23	True	NA	NA	False	AATAAA	-42	NA	151447585	151453266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_151447814_151452342
transcript_115157.known	chr5	+	5772	11	FSM	ENSG00000123643.13	ENST00000243389.8	5772	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	3.96106046406767	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGCTATCTGTGTCTT	-6	True	NA	30	True	AATAAA	-23	NA	151447602	151492379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706_151467926_151473672_151473772_151476589_151476757_151479319_151479490_151487982
transcript_115168.known	chr5	+	1000	2	FSM	ENSG00000145907.16	ENST00000676634.1	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTATTAAAATATTTC	-7	True	NA	-13	True	NA	NA	NA	151771946	151805319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151772033_151804405
transcript_115169.known	chr5	-	726	2	FSM	ENSG00000275765.6	ENST00000623943.2	1185	2	0	459	0	-459	multi-exon	FALSE	canonical	3	21	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACATTTACAGATTAGT	605	False	NA	NA	False	NA	NA	NA	151771508	151770241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151770773_151771313
transcript_115170.known	chr5	-	471	4	FSM	ENSG00000177556.12	ENST00000313115.11	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_3	80.7589004382799	10694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	7738	False	151758644	-9	True	AATAAA	-21	NA	151758631	151742821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151758545
transcript_115171.known	chr5	-	466	4	FSM	ENSG00000177556.12	ENST00000520382.5	466	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	436.548075499391	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	4749	False	NA	-9	True	AATAAA	-21	NA	151753895	151742821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151753814
transcript_115172.known	chr5	-	423	2	FSM	ENSG00000177556.12	ENST00000522145.5	423	2	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_1	0	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	NA	False	NA	-9	True	AATAAA	-21	NA	151746563	151742821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151742960_151746278
transcript_115173.known	chr5	+	1768	12	FSM	ENSG00000145907.16	ENST00000676827.1	1768	12	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	846.868602412479	2347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTCCTTGCTTAC	14	False	NA	NA	False	TTTAAA	-15	NA	151771938	151804346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151772033_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_115174.known	chr5	+	1794	13	FSM	ENSG00000145907.16	ENST00000678101.1	1794	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1117.30572509646	2373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGACTGGATTTTTT	0	True	NA	NA	False	AAAAAG	-25	NA	151771953	151804371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151772037_151772656_151772669_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_115175.known	chr5	+	1207	3	FSM	ENSG00000145907.16	ENST00000676894.1	1207	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1146	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCTCTGACAATGGAA	21	False	NA	NA	False	AATAAA	-17	NA	151771974	151787868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151772037_151786571_151786716_151786867
transcript_115183.known	chr5	-	2121	15	FSM	ENSG00000055147.19	ENST00000520667.5	2121	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	27.3429653677512	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATATGTAAACTCTG	-26	True	NA	NA	False	AATAAA	-20	NA	154038921	153992498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038387_154038435_154038856
transcript_115185.known	chr5	-	4414	14	FSM	ENSG00000055147.19	ENST00000351797.9	4414	14	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_13	10.0525247792716	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGATATTTCACAAA	-15	True	NA	NA	False	AATAAA	-25	NA	154038910	153990147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038856
transcript_115198.nic	chr5	-	1000	8	ISM	ENSG00000055147.19	ENST00000351797.9	4414	14	-20	36252	2	-88	5prime_fragment	FALSE	canonical	3	57	junction_7	13.2449451274277	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAATATGAAAATTTAGTA	-35	True	NA	NA	False	NA	NA	NA	154038930	154026399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038856
transcript_115200.known	chr5	-	3379	14	FSM	ENSG00000055147.19	ENST00000522858.5	3379	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	20.2467032892479	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAGCAAAGCA	29	True	NA	58	True	NA	NA	NA	154038866	153991702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038292
transcript_115201.known	chr5	-	609	5	FSM	ENSG00000055147.19	ENST00000519808.5	609	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	43.0058135604944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTGAAGTCAAGTATG	-37	True	NA	NA	False	NA	NA	NA	154038932	154033816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_154033884_154034277_154034378_154034743_154034968_154038292_154038435_154038856
transcript_115203.known	chr5	+	5037	3	FSM	ENSG00000037749.13	ENST00000522782.6	5037	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	23	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	-13	True	NA	29	True	ATTAAA	-31	NA	154038966	154057450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154039012_154049556_154050018_154052919
transcript_115206.known	chr5	+	2891	3	FSM	ENSG00000037749.13	ENST00000322602.9	2891	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	64	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCCTGGCTGAGATC	13	True	NA	2	True	AATAAA	-15	NA	154038992	154055033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154039309_154049556_154050018_154052919
transcript_115208.known	chr5	+	1186	2	FSM	ENSG00000037749.13	ENST00000439768.2	1186	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTCAGTTTTTCCGTCA	-21	True	NA	NA	False	NA	NA	NA	154038958	154054052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154039012_154052919
transcript_115209.known	chr5	+	520	2	FSM	ENSG00000037749.13	ENST00000520899.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTTTGTTTTGGAAG	19	True	NA	NA	False	NA	NA	NA	154038998	154049772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154039303_154049556
transcript_115211.known	chr5	-	536	3	FSM	ENSG00000245275.8	ENST00000652895.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGGTGTAATTCCATC	7	True	NA	NA	False	GATAAA	-20	NA	154445813	154408748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_154409090_154443361_154443481_154445737
transcript_115221.nnic	chr5	+	616	3	NNC	ENSG00000155506.19	novel	6652	19	NA	NA	-26	-45968	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCATTGGTGAGATGA	0	True	NA	NA	False	ATTAAA	-17	NA	154712816	154740716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_154713131_154717742_154717843_154740514
transcript_115223.nnic	chr5	+	521	2	NNC	ENSG00000155506.19	novel	6652	19	NA	NA	-31	-45968	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCATTGGTGAGATGA	-5	True	NA	NA	False	ATTAAA	-17	NA	154712811	154740716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_154713131_154740514
transcript_115224.known	chr5	-	2947	9	FSM	ENSG00000170271.11	ENST00000326080.10	2947	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	2.72717802865893	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGATAATTTTTTT	7	True	NA	-1	True	AATAAA	-15	NA	154850603	154818491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_154820473_154821259_154821427_154822471_154822578_154823386_154823593_154830800_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
transcript_115228.known	chr5	+	2604	7	FSM	ENSG00000155508.14	ENST00000403027.6	2604	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	158.436895955456	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	5	True	NA	14	True	AATAAA	-23	NA	154858516	154876792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_115232.known	chr5	+	920	6	FSM	ENSG00000155508.14	ENST00000518775.5	920	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	233.382947106253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCATCCTGGCGATT	13	True	NA	NA	False	NA	NA	NA	154858661	154875398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154858834_154863206_154863396_154865191_154865386_154871729_154871875_154872540_154872652_154875289
transcript_115237.nic	chr5	-	2328	16	ISM	ENSG00000082516.9	ENST00000285873.8	5404	28	-13	20338	-13	-16315	5prime_fragment	FALSE	canonical	3	154	junction_5	24.5541578284955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACCTTGAGAACTCCTG	-21	True	NA	NA	False	AAAAAG	-9	NA	154938224	154907748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_115238.known	chr5	-	5404	28	FSM	ENSG00000082516.9	ENST00000285873.8	5404	28	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_17	27.2842578609593	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTCCTAATTTTGCA	-8	True	NA	-13	True	ATTAAA	-26	NA	154938211	154887410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_154888378_154889320_154889418_154891240_154891743_154892386_154892550_154896091_154896344_154898439_154898651_154899190_154899311_154901338_154901487_154902538_154902677_154903079_154903176_154904506_154904630_154905362_154905477_154907590_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_115245.known	chr5	+	784	6	FSM	ENSG00000082515.18	ENST00000439747.7	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_1	119.290234302729	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTTTATGATTT	6	True	NA	9	True	AATAAA	-13	NA	154941094	154966966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154941266_154950820_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_115246.known	chr5	+	511	5	FSM	ENSG00000082515.18	ENST00000519059.5	511	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	787.231343062508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGAGGAGATTCAGACT	88	False	NA	-64	True	NA	NA	NA	154941176	154966893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154941266_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_115247.known	chr5	+	481	3	FSM	ENSG00000082515.18	ENST00000518364.1	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	1027.5	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTTATGATTTCTCAT	NA	False	NA	14	True	AATAAA	-18	NA	154959050	154966971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154959176_154959979_154960050_154966685
transcript_115248.known	chr5	-	1382	2	FSM	ENSG00000155868.8	ENST00000420343.1	1382	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGCAAAGTTTTCGT	85	False	NA	-25	True	AGTAAA	-18	NA	157142775	157138441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157139449_157142400
transcript_115250.known	chr5	-	2071	2	FSM	ENSG00000155868.8	ENST00000286317.6	2071	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGAGGGTTCTCTGGCT	-5	True	NA	NA	False	AATAAA	-39	NA	157142865	157137423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157139449_157142819
transcript_115251.known	chr5	+	6452	31	FSM	ENSG00000055163.20	ENST00000620254.5	6452	31	0	0	0	0	multi-exon	TRUE	canonical	2	152	junction_18	28.4222330813983	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGGTCTTGATTCCT	11	True	NA	NA	False	ATTAAA	-25	NA	157266122	157395594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_115254.known	chr5	+	1294	8	FSM	ENSG00000055163.20	ENST00000622696.4	1294	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	27.4174084427082	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGGGAAGCAGGTGG	24	True	NA	NA	False	AATAAA	-21	NA	157266135	157304782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237
transcript_115256.known	chr5	+	580	6	FSM	ENSG00000055163.20	ENST00000522637.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	90.1829252131466	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGCTGGCTGACATT	16	True	NA	NA	False	NA	NA	NA	157266127	157304274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287075_157300714_157300897_157302793_157302891_157304237
transcript_115257.nic	chr5	+	1068	4	NIC	ENSG00000055163.20	novel	582	3	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	112.18140071628	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACAGGGCAGTGTGTG	1003	False	NA	NA	False	CATAAA	-19	NA	157384240	157393223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_157384531_157389188_157389428_157390520_157390669_157392832
transcript_115258.known	chr5	-	6481	23	FSM	ENSG00000135074.16	ENST00000257527.9	6481	23	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_15	9.36010524769534	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTGGCAGCTCTTTA	-1	True	NA	-5	True	ATTAAA	-29	NA	157575775	157477303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157481003_157481790_157481944_157488264_157488490_157489101_157489187_157490309_157490455_157491614_157491724_157491834_157491913_157492972_157493178_157494686_157494796_157496893_157497090_157499572_157499663_157502802_157502981_157505668_157505809_157507055_157507141_157509300_157509468_157513433_157513506_157518822_157518889_157519838_157520032_157530806_157530884_157537912_157537992_157564372_157564444_157570894_157570981_157575602
transcript_115259.known	chr5	+	2885	6	FSM	ENSG00000113272.14	ENST00000231198.12	2885	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	13.8650640099496	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTTTTTCATTTATTT	-3	True	NA	5	True	AATAAA	-17	NA	157731419	157741449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157731632_157732867_157733045_157734575_157734746_157735845_157735935_157737886_157737995_157739320
transcript_115262.known	chr5	+	919	6	FSM	ENSG00000113272.14	ENST00000521655.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	42.9725493774805	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGTGCGAATGACA	-3	True	NA	NA	False	NA	NA	NA	157731419	157739578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157731632_157732867_157733045_157734670_157734746_157735845_157735935_157737886_157737995_157739320
transcript_115267.known	chr5	-	3952	12	FSM	ENSG00000113282.14	ENST00000411809.7	3952	12	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	163.76484854765	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTTAATTCTTT	-7	True	NA	NA	False	AGTAAA	-13	NA	157859145	157785746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157787993_157789362_157789514_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_115268.known	chr5	-	2346	12	FSM	ENSG00000113282.14	ENST00000523908.5	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	131.640193314458	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAGACCATTGAAAGC	-5	True	NA	NA	False	NA	NA	NA	157859143	157787404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_115269.known	chr5	-	3987	12	FSM	ENSG00000113282.14	ENST00000523094.5	3987	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	262.402913962857	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTAATTCTTTCTCT	-7	True	NA	NA	False	AGTAAA	-17	NA	157859145	157785742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858952
transcript_115286.nic	chr5	-	670	5	ISM	ENSG00000113282.14	ENST00000523908.5	2346	12	-44	25722	-42	-21369	5prime_fragment	FALSE	canonical	3	866	junction_3	45.4113146693641	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAGAAGAACAAAGACAA	NA	False	NA	NA	False	AAGAAA	-1	NA	157859187	157813126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_115288.nic	chr5	-	438	3	ISM	ENSG00000113282.14	ENST00000523908.5	2346	12	-44	29351	-42	-24998	5prime_fragment	FALSE	canonical	3	866	junction_1	51.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGGAGAAGAGTTTATA	NA	False	NA	NA	False	NA	NA	NA	157859187	157816755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_157816831_157817442_157817548_157858929
transcript_115289.known	chr5	-	3344	12	FSM	ENSG00000113282.14	ENST00000530742.5	3344	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	262.65629742786	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTGCTTTTTCTTT	5	True	NA	-12	True	ATTAAA	-18	NA	157859133	157786286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157859039
transcript_115290.known	chr5	-	3478	11	FSM	ENSG00000145860.12	ENST00000519865.5	3478	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	55.4703524416422	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTTTTGTTCTTGTGGT	3	True	NA	-2	True	AATAAA	-18	NA	159208073	159157408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159207887
transcript_115292.known	chr5	-	2603	11	FSM	ENSG00000145860.12	ENST00000518802.5	2603	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	54.9221266886125	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAAAGAAGGAGGCAGAA	NA	False	NA	NA	False	GATAAA	-16	NA	159210053	159158298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_159159036_159161265_159161623_159162931_159163080_159168872_159169056_159169678_159169820_159173982_159174159_159176631_159176868_159181959_159182052_159194715_159194825_159203433_159203657_159209852
transcript_115294.nnic	chr5	-	886	2	NNC	ENSG00000145860.12	novel	572	4	NA	NA	345	-21674	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAACAACATGG	751	False	NA	NA	False	AAGAAA	-9	NA	159209208	159203633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_159203657_159208345
transcript_115298.known	chr5	+	2179	11	FSM	ENSG00000164332.8	ENST00000296786.8	2179	11	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_10	23.0228147714392	1782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCGTTATCTGTTCTATA	-15	True	NA	16	True	AATAAA	-16	NA	159263289	159286036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_159263361_159268869_159269070_159269907_159270000_159270359_159270446_159270527_159270644_159272022_159272122_159274584_159274623_159275147_159275247_159278237_159278355_159283211_159283340_159284903
transcript_115314.known	chr5	+	1162	6	FSM	ENSG00000113312.12	ENST00000683631.1	1162	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	310.896767432535	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	121	False	NA	10	True	AATAAA	-10	NA	160010656	160065537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160010859_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_115317.known	chr5	-	3373	2	FSM	ENSG00000170234.13	ENST00000307063.9	3373	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	-24	True	NA	-19	True	AATAAA	-17	NA	160119450	160091338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160094066_160118804
transcript_115319.known	chr5	+	1441	8	FSM	ENSG00000113312.12	ENST00000231238.10	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	64.7598389026245	3357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGTTAGGTTGTGAA	-7	True	NA	16	True	AATAAA	-16	NA	160009138	160065543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_115320.known	chr5	+	1283	7	FSM	ENSG00000113312.12	ENST00000684018.1	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	256.35939399384	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCTGTGCTTAGGTC	-14	True	NA	0	True	NA	NA	NA	160009131	160065527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160051128_160051184_160064931
transcript_115321.known	chr5	+	1366	7	FSM	ENSG00000113312.12	ENST00000684137.1	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	271.377146339841	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	-19	True	NA	-16	True	NA	NA	NA	160009126	160065511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160064931
transcript_115322.known	chr5	+	2208	7	FSM	ENSG00000113312.12	ENST00000682151.1	2208	7	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	68.0343050722697	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	NA	False	NA	NA	NA	160009124	160052548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128
transcript_115323.known	chr5	+	1581	9	FSM	ENSG00000113312.12	ENST00000682172.1	1581	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	321.997185546706	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	-10	True	NA	10	True	AATAAA	-10	NA	160009135	160065537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160018888_160019032_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_115324.known	chr5	+	1342	8	FSM	ENSG00000113312.12	ENST00000682131.1	1342	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	264.21242226972	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	0	True	NA	10	True	AATAAA	-10	NA	160009145	160065537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010585_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_115326.known	chr5	+	756	7	FSM	ENSG00000170231.16	ENST00000393980.8	756	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	13.7325647034097	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTCTTTTCT	NA	False	NA	23	True	AATAAA	-35	NA	160187366	160238735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160187455_160199048_160199158_160213735_160213820_160229545_160229625_160232097_160232274_160234819_160234910_160238605
transcript_115328.known	chr5	+	769	6	FSM	ENSG00000170231.16	ENST00000523955.5	769	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	16.5722659886933	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	-12	True	NA	4	True	AATAAA	-16	NA	160213726	160238716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160213820_160228472_160228693_160229545_160229625_160232097_160232274_160234819_160234910_160238605
transcript_115329.nnic	chr5	+	720	5	NNC	ENSG00000170231.16	novel	769	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.5150783669948	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	-15	True	NA	4	True	AATAAA	-16	NA	160213723	160238716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_160213820_160229377_160229625_160232097_160232274_160234819_160234910_160238605
transcript_115331.nnic	chr5	+	474	4	NIC	ENSG00000170231.16	novel	769	6	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	16.5193489244852	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	-16	True	NA	4	True	AATAAA	-16	NA	160213722	160238716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_160213820_160232097_160232274_160234819_160234910_160238605
transcript_115332.known	chr5	+	440	3	FSM	ENSG00000170231.16	ENST00000521362.1	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	-11	True	NA	4	True	AATAAA	-16	NA	160232034	160238716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160232274_160234819_160234910_160238605
transcript_115333.known	chr5	+	496	4	FSM	ENSG00000170231.16	ENST00000402432.4	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2.94392028877595	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	1	True	NA	4	True	AATAAA	-16	NA	160229505	160238716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160229625_160232097_160232274_160234819_160234910_160238605
transcript_115334.known	chr5	-	3118	6	FSM	ENSG00000135083.17	ENST00000644313.1	3118	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	77.6644062618134	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACCTCTTGTCCTAGGC	NA	False	NA	-7	True	AATAAA	-21	NA	160312928	160251656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312744
transcript_115335.known	chr5	-	5709	6	FSM	ENSG00000135083.17	ENST00000257536.13	5709	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	29.0337734371542	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGATCTTTTATTTCTT	-10	True	NA	NA	False	ATTAAA	-16	NA	160312564	160249082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
transcript_115337.known	chr5	+	333	1	FSM	ENSG00000254373.1	ENST00000522428.1	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATGTAGTTGAAGTCT	8	False	NA	NA	False	AAGAAA	-26	NA	160258252	160258585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160258300_160258600
transcript_115341.known	chr5	-	2385	3	FSM	ENSG00000145861.9	ENST00000393975.4	2385	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	160370641	160347779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160349782_160354767_160355021_160370511
transcript_115342.known	chr5	-	2808	2	FSM	ENSG00000221886.4	ENST00000408953.4	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTGTCATCTTTAA	-10	True	NA	-2	True	AATAAA	-17	NA	160400054	160393147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160395540_160399638
transcript_115355.known	chr5	-	3480	16	FSM	ENSG00000164609.10	ENST00000297151.9	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_8	28.1334913107729	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGTAGCATTATTTC	-8	True	NA	-1	True	CATAAA	-20	NA	160419081	160401640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_115356.known	chr5	-	577	5	FSM	ENSG00000164609.10	ENST00000519349.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	124.123678240697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCATGACACACAAAAAGAA	-8	True	NA	NA	False	NA	NA	NA	160419081	160413931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160413980_160414318_160414473_160415124_160415311_160417111_160417242_160419022
transcript_115357.known	chr5	+	895	6	FSM	ENSG00000164611.13	ENST00000520452.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	1304.92690983059	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTTGTATTAATAAA	25	False	NA	-7	True	TTTAAA	-23	NA	160421903	160428704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160422156_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_115360.known	chr5	+	670	6	FSM	ENSG00000164611.13	ENST00000519287.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	1315.86965919881	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	-8	True	NA	28	True	AATAAA	-16	NA	160422206	160428739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160422237_160422339_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_115363.known	chr5	+	715	6	FSM	ENSG00000164611.13	ENST00000352433.10	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	2239	junction_1	496.637332467063	21864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	-5	True	NA	28	True	AATAAA	-16	NA	160421854	160428739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160421892_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_115364.known	chr5	+	1070	5	FSM	ENSG00000164611.13	ENST00000393964.1	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	2777	junction_4	312.198154222603	3400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	31	False	NA	28	True	AATAAA	-16	NA	160421909	160428739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_115365.known	chr5	+	4238	10	FSM	ENSG00000022355.18	ENST00000393943.10	4238	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	9.6083811151682	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATGTTTTGAAAGGAC	-3	True	NA	25	True	AATAAA	-41	NA	161848119	161899971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_161848423_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897_161891051_161895665_161895869_161897110
transcript_115367.known	chr5	+	4087	10	FSM	ENSG00000022355.18	ENST00000437025.6	4087	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.9251098251394	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATACTTGACTCTCTTT	96	False	NA	8	True	AATAAA	-24	NA	161848443	161899954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_161848613_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897_161891051_161895665_161895869_161897110
transcript_115369.nic	chr5	+	1794	9	ISM	ENSG00000022355.18	ENST00000023897.10	2083	11	844	1466	-85	-1462	internal_fragment	FALSE	canonical	3	25	junction_1	10.0739453542294	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCAAGTGCGTTATAAT	34	False	NA	NA	False	AATAAA	-18	NA	161848034	161896200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_161848423_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161882557_161882702_161890897_161891051_161895665
transcript_115370.known	chr5	+	4878	9	FSM	ENSG00000022355.18	ENST00000635916.2	4878	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.7512499583361	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAGTCCAATGAAGAT	384	False	NA	NA	False	NA	NA	NA	161847662	161898086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_161848423_161850795_161850885_161854157_161854271_161865720_161865789_161873116_161873338_161875559_161875643_161881731_161882702_161890897_161891051_161895665
transcript_115376.known	chr5	+	11548	9	FSM	ENSG00000113327.17	ENST00000639111.2	11548	9	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	2.44629822384762	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTTTAATGTCTACA	-11	True	NA	NA	False	AATAAA	-20	NA	162067464	162162977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_162068107_162093827_162093980_162095494_162095563_162097637_162097859_162101234_162101318_162103888_162104027_162142163_162142317_162149107_162149314_162153092
transcript_115386.known	chr5	+	2849	4	FSM	ENSG00000113327.17	ENST00000640500.1	2849	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.71404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAATCCATGGTGGCAT	NA	False	NA	-3	True	AATAAA	-9	NA	162128321	162155515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_162128389_162142163_162142317_162149107_162149314_162153092
transcript_115389.nnic	chr5	+	731	2	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-340	-33030	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAGAAAGA	NA	False	NA	NA	False	AAAAAG	-28	NA	162036430	162061730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_162036955_162061523
transcript_115390.nnic	chr5	+	872	2	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-340	-32889	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTCATTCACTATTTC	NA	False	NA	NA	False	AAAAAG	-8	NA	162036430	162061871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_162036955_162061523
transcript_115402.nnic	chr5	+	1028	4	Antisense	novelGene_ENSG00000254186.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTCCACTAAGGCTGT	1400	False	NA	NA	False	AATAAA	-20	NA	162278170	162438355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_162278739_162355344_162355473_162356877_162357015_162438160
transcript_115406.nnic	chr5	-	1072	4	NNC	ENSG00000254186.3	novel	2798	15	NA	NA	4	-67138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGCAGTACTGGCATTC	4	True	NA	NA	False	ATTAAA	-22	NA	163437289	163323988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_163324743_163425802_163425921_163428940_163429034_163437182
transcript_115414.known	chr5	-	492	4	FSM	ENSG00000254186.3	ENST00000503504.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAGAATAACTTACATT	2	True	NA	NA	False	NA	NA	NA	163437326	163256850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_163256988_163425802_163425921_163428940_163429034_163437182
transcript_115417.known	chr5	+	1071	6	FSM	ENSG00000113328.19	ENST00000511683.6	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	1538.53501747604	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCCTACTTAAATTTTAA	166	False	NA	NA	False	NA	NA	NA	163437765	163444078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163437805_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_115420.known	chr5	+	2366	8	FSM	ENSG00000113328.19	ENST00000393929.5	2366	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	1435.17542126247	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTTGCTGGGTGGCTT	NA	False	NA	14	True	AATAAA	-14	NA	163437570	163445014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163437665_163437764_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_115421.known	chr5	+	2444	7	FSM	ENSG00000113328.19	ENST00000340828.7	2444	7	0	0	0	0	multi-exon	FALSE	canonical	3	3745	junction_3	194.332189819391	3060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCTGGGTGGCTTTT	-5	True	NA	16	True	AATAAA	-16	NA	163437594	163445016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_11543.known	chr1	-	1871	8	FSM	ENSG00000158850.15	ENST00000367998.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	125.306318553327	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	12	True	NA	-29	True	AATAAA	-14	NA	161177497	161171311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176509_161177422
transcript_115443.known	chr5	-	652	3	FSM	ENSG00000170584.11	ENST00000521797.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	584.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTGGGTGCAAGACCAA	276	False	NA	NA	False	NA	NA	NA	163459836	163456987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_163457081_163457561_163457611_163459326
transcript_115444.known	chr5	-	7967	4	FSM	ENSG00000170584.11	ENST00000302764.9	7967	4	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_3	58.0861429258304	3130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACTTGAGTCCAATTAA	10	True	NA	NA	False	ATTAAA	-15	NA	163460102	163446525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_163454051_163456928_163457081_163457561_163457611_163459861
transcript_115445.known	chr5	-	448	4	FSM	ENSG00000170584.11	ENST00000517501.1	448	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	556.078132000251	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAATCAGATAAACAGAT	-1	True	NA	NA	False	NA	NA	NA	163460055	163453922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_163454051_163456928_163457006_163457561_163457611_163459861
transcript_115447.known	chr5	+	2988	18	FSM	ENSG00000072571.20	ENST00000358715.3	2988	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	106.557488098661	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	7	True	NA	13	True	AATAAA	-26	NA	163460656	163491941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_115453.known	chr5	+	2872	17	FSM	ENSG00000072571.20	ENST00000353866.7	2872	17	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_3	69.4883083691062	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGATAATGCTCACTT	NA	False	NA	NA	False	AAAACA	-27	NA	163460365	163491579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_115456.known	chr5	+	2084	15	FSM	ENSG00000072571.20	ENST00000432118.6	2084	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	109.066470090304	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTATTTTATAATGTTGTA	-16	True	NA	-45	True	NA	NA	NA	163460633	163491238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163460739_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_115462.nic	chr5	+	1006	9	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	-42	18385	-42	2093	5prime_fragment	FALSE	canonical	3	226	junction_3	89.2422965863161	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTACAGTGTTTTATAG	NA	False	NA	NA	False	AAAAAG	-6	NA	163460589	163473556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378
transcript_115466.nic	chr5	+	753	7	ISM	ENSG00000072571.20	ENST00000393915.9	3016	18	-42	20478	-42	0	5prime_fragment	FALSE	canonical	3	226	junction_3	102.345818999443	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAGTGAATGTGAAG	NA	False	NA	NA	False	NA	NA	NA	163460589	163471463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467700_163467749_163469640_163469830_163471184_163471272_163471362
transcript_115477.known	chr5	+	2064	7	FSM	ENSG00000038274.17	ENST00000321757.11	2064	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	110.554159678513	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATGTTACAGTTAC	8	True	NA	37	True	AATAAA	-38	NA	163505618	163519354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_115486.known	chr5	+	3409	5	FSM	ENSG00000038274.17	ENST00000518095.5	3409	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	124.880943302011	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGAATGTTAACTTAC	3	True	NA	10	True	AATAAA	-21	NA	163505613	163519327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517
transcript_115490.known	chr5	+	2226	7	FSM	ENSG00000038274.17	ENST00000280969.9	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	116.405421790491	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACTTACCACCCCATC	0	True	NA	19	True	AATAAA	-30	NA	163503113	163519336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163503425_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_115491.known	chr5	+	3210	6	FSM	ENSG00000038274.17	ENST00000523606.1	3210	6	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	118.833328658251	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTAGTTTTCTTGTAT	15	True	NA	16	True	AATAAA	-19	NA	163505625	163519149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163505750_163512001_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_115493.known	chr5	+	784	3	FSM	ENSG00000241956.11	ENST00000519329.2	784	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGTTTCTGCTTTTCTC	-2	True	NA	NA	False	AATAAA	-17	NA	164296965	164487142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_164297197_164354140_164354225_164486673
transcript_115500.known	chr5	+	295	1	FSM	ENSG00000229119.3	ENST00000518938.1	295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAATCACCAAAAAGCAAC	NA	False	NA	NA	False	NA	NA	NA	166382304	166382599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_166382300_166382600
transcript_115504.nnic	chr5	-	1641	5	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-100	465	multi-exon	FALSE	canonical	3	66	junction_2	21.6491916708223	307	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303472	167286854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167291941_167292030_167294250_167294401_167297462_167297551_167303122
transcript_115507.nnic	chr5	-	1183	5	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-100	7	multi-exon	FALSE	canonical	3	66	junction_2	21.6491916708223	210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303472	167287312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167291941_167292030_167294250_167294401_167297462_167297551_167303122
transcript_115508.nnic	chr5	-	1394	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-3	465	multi-exon	FALSE	canonical	3	8	junction_2	48.3942145302514	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303375	167286854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167291941_167292030_167297462_167297551_167303122
transcript_115509.nnic	chr5	-	1500	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-47	465	multi-exon	FALSE	canonical	3	21	junction_1	42.8330090778907	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303419	167286854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167294250_167294401_167297462_167297551_167303122
transcript_115511.nnic	chr5	-	989	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-1	0	multi-exon	FALSE	canonical	3	21	junction_1	42.8330090778907	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTATTGTTATTAC	NA	False	NA	NA	False	AATAAA	-21	NA	167303373	167287319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167294250_167294401_167297462_167297551_167303122
transcript_115515.nnic	chr5	-	1362	3	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	0	2857	multi-exon	FALSE	canonical	3	85	junction_1	20	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTAGCCGGACAT	NA	False	NA	NA	False	AATACA	-14	NA	167303372	167293376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167294401_167297462_167297551_167303122
transcript_115523.nnic	chr5	-	995	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	0	7	multi-exon	FALSE	canonical	3	21	junction_1	42.8330090778907	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303372	167287312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167294250_167294401_167297462_167297551_167303122
transcript_115525.nnic	chr5	-	1177	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-244	7	multi-exon	FALSE	canonical	3	8	junction_2	48.3942145302514	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303616	167287312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167291941_167292030_167297462_167297551_167303122
transcript_115532.nnic	chr5	-	1360	3	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-1	2854	multi-exon	FALSE	canonical	3	85	junction_1	20	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTAGCCGGA	NA	False	NA	NA	False	AATACA	-11	NA	167303373	167293379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167294401_167297462_167297551_167303122
transcript_115533.known	chr5	-	648	3	FSM	ENSG00000254297.1	ENST00000523497.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	42	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGGGTGAACACAAAGA	NA	False	NA	NA	False	NA	NA	NA	167303372	167296233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_167296544_167297462_167297551_167303122
transcript_115537.nnic	chr5	-	781	5	NNC	ENSG00000253978.2	novel	503	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	8.16624148553054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-5	True	GATAAA	-22	NA	168269478	168229582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168232303_168232373_168233759_168233818_168269273
transcript_115540.nnic	chr5	-	729	4	NNC	ENSG00000253978.2	novel	503	3	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.65383665716478	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-5	True	GATAAA	-22	NA	168269484	168229582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168232303_168232373_168269273
transcript_115541.nnic	chr5	-	735	4	NNC	ENSG00000253978.2	novel	503	3	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.65383665716478	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-5	True	GATAAA	-22	NA	168269467	168229582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168232303_168232396_168269273
transcript_115545.known	chr5	-	590	3	FSM	ENSG00000253978.2	ENST00000655017.1	590	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGACTTCCTAGTGCTT	NA	False	NA	-6	True	GATAAA	-21	NA	168269415	168229583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_168229861_168230885_168231057_168269273
transcript_115546.known	chr5	-	503	3	FSM	ENSG00000253978.2	ENST00000519795.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-5	True	GATAAA	-22	NA	168232357	168229582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_168229861_168230885_168231057_168232303
transcript_115547.known	chr5	+	3980	22	FSM	ENSG00000113645.15	ENST00000393895.7	3980	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_19	17.4762553521567	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTCCTCTTGCTCTCT	NA	False	NA	12	True	AATAAA	-16	NA	168371420	168469756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168371534_168385210_168385415_168397723_168397801_168399487_168399568_168406197_168406328_168408506_168408654_168409921_168409996_168414347_168414591_168422007_168422098_168423532_168424069_168428032_168428142_168428706_168428788_168430136_168430224_168431251_168431445_168441681_168441835_168444493_168444586_168453967_168454101_168455355_168455521_168460649_168460743_168464710_168464963_168467842_168467965_168468950
transcript_115552.known	chr5	+	2122	15	FSM	ENSG00000113643.9	ENST00000231572.8	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_3	76.4230972672422	3051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTGGTTCTTTAACA	0	True	NA	19	True	AGTAAA	-19	NA	168486470	168519301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_115553.known	chr5	+	757	3	FSM	ENSG00000113643.9	ENST00000524082.5	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_2	47	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCAATTAAATATTTGAT	NA	False	NA	NA	False	ATTAAA	-22	NA	168486450	168493187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168486544_168488601_168488737_168492658
transcript_115554.known	chr5	+	1330	1	FSM	ENSG00000188573.8	ENST00000338333.5	1330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATCTGTATGGTGATGCC	-15	True	NA	13	True	ATTAAA	-19	NA	168529304	168530634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168529300_168530600
transcript_115555.known	chr5	-	10274	7	FSM	ENSG00000120137.7	ENST00000239231.7	10274	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	18.2847842025366	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTTTTTATTATTT	-11	True	NA	-3	True	AATAAA	-20	NA	168579368	168548494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
transcript_115571.known	chr5	+	645	1	FSM	ENSG00000233913.7	ENST00000522551.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4753	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCAATGTGCTGCCC	39	False	NA	NA	False	NA	NA	NA	168616351	168616996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168616400_168617000
transcript_115583.known	chr5	+	2529	12	FSM	ENSG00000040275.17	ENST00000265295.9	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_11	38.4290695753846	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	9	True	NA	26	True	AATAAA	-23	NA	169583772	169604778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_115584.nic	chr5	+	2644	12	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_7	108.433321096271	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	NA	False	NA	26	True	AATAAA	-23	NA	169583633	169604778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596584_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_115589.known	chr5	+	552	4	FSM	ENSG00000040275.17	ENST00000515224.5	552	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	184.246815139065	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACCTGGAGAAATTGGAA	-26	True	NA	-65	True	ATTAAA	-14	NA	169583737	169591153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_169583890_169587260_169587373_169588393_169588576_169591047
transcript_115593.known	chr5	+	711	4	FSM	ENSG00000040275.17	ENST00000506574.5	711	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	179.841288053908	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCACCTGGAGAAAT	NA	False	NA	-70	True	ATTAAA	-9	NA	169583635	169591148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_169583890_169587198_169587373_169588393_169588576_169591047
transcript_115598.known	chr5	+	471	4	FSM	ENSG00000234511.10	ENST00000593851.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1.63299316185545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	14	True	NA	NA	False	AATAAA	-18	NA	170232984	170246231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170233008_170234114_170234199_170234976_170235071_170245961
transcript_115600.nnic	chr5	+	589	4	NNC	ENSG00000234511.10	novel	471	4	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	-10	True	NA	NA	False	AATAAA	-18	NA	170232960	170246231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_170233008_170234976_170235071_170236079_170236258_170245961
transcript_115601.nic	chr5	+	411	3	NIC	ENSG00000234511.10	novel	471	4	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	-10	True	NA	NA	False	AATAAA	-18	NA	170232960	170246231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_170233008_170234976_170235071_170245961
transcript_115602.nnic	chr5	+	557	2	NNC	ENSG00000234511.10	novel	2113	3	NA	NA	10321	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	NA	False	NA	NA	False	AATAAA	-18	NA	170245252	170246231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_170245540_170245961
transcript_115604.known	chr5	-	4742	4	FSM	ENSG00000145936.9	ENST00000274629.9	4742	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTAGTGCTTCCATCAT	0	True	NA	NA	False	AATAAA	-16	NA	170389367	170374670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_170378974_170383678_170383851_170385313_170385472_170389258
transcript_115621.known	chr5	+	689	4	FSM	ENSG00000094755.17	ENST00000519196.5	689	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTACAGATAGCGCTGACT	NA	False	NA	NA	False	NA	NA	NA	170764913	170794236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170765383_170788573_170788669_170789128_170789248_170794230
transcript_115624.nnic	chr5	-	1898	4	NNC	ENSG00000253348.1	novel	345	2	NA	NA	-10	2171	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	5.71547606649408	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAAAGTGGGTCCCCTTG	NA	False	NA	-17	True	AATAAA	-21	NA	170767568	170744875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_170746112_170746910_170747194_170757860_170757979_170767307
transcript_115625.nnic	chr5	-	1310	4	NNC	ENSG00000253348.1	novel	345	2	NA	NA	-10	1675	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	8.65383665716478	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGTTTCTTGGTCTAT	NA	False	NA	0	True	AATAGA	-18	NA	170767568	170745371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_170746020_170746910_170747194_170757860_170757979_170767307
transcript_115627.nnic	chr5	-	1402	4	NNC	ENSG00000253348.1	novel	345	2	NA	NA	-10	1675	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	5.71547606649408	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGTTTCTTGGTCTAT	NA	False	NA	0	True	AATAGA	-18	NA	170767568	170745371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_170746112_170746910_170747194_170757860_170757979_170767307
transcript_11563.known	chr1	+	813	6	FSM	ENSG00000143224.18	ENST00000544598.5	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	132.393353307483	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	13	True	NA	12	True	AATAAA	-18	NA	161166469	161171220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161170906_161170950_161171033
transcript_115634.known	chr5	+	2182	6	FSM	ENSG00000204764.14	ENST00000519130.5	2182	6	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_5	7.57363849150459	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAACAAGGACTGCACT	8	True	NA	NA	False	NA	NA	NA	170862022	170911342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660
transcript_11564.known	chr1	+	1667	13	FSM	ENSG00000143224.18	ENST00000652473.1	1667	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	93.8185305079261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAACTCTCATTCATGA	10	True	NA	-32	True	NA	NA	NA	161166466	161171176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_11565.known	chr1	+	473	4	FSM	ENSG00000143224.18	ENST00000462866.5	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	137.334142392439	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	170	False	NA	10	True	AATAAA	-16	NA	161166839	161171218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166935_161170619_161170770_161170906_161170950_161171033
transcript_11566.known	chr1	+	784	2	FSM	ENSG00000143224.18	ENST00000466452.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTCATTCATGAAAATA	2676	False	NA	-27	True	NA	NA	NA	161170260	161171181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161170770_161170906
transcript_115665.known	chr5	+	1338	12	FSM	ENSG00000181163.14	ENST00000517671.5	1338	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	6009.66119835455	11919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTTTCTATTGACTT	NA	False	NA	13	True	AATAAA	-21	NA	171387115	171410883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171387235_171387932_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_11567.known	chr1	-	1933	8	FSM	ENSG00000158850.15	ENST00000319769.10	1933	8	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	48.9051560238211	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	2	True	NA	-27	True	AATAAA	-16	NA	161177507	161171309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177422
transcript_11568.known	chr1	-	909	5	FSM	ENSG00000158850.15	ENST00000496313.5	909	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	141.951356104829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACCCCCAATCTCCACC	503	False	NA	NA	False	NA	NA	NA	161177468	161174994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161175229_161175807_161176096_161176433_161176580_161176911_161177107_161177422
transcript_115696.known	chr5	+	2258	11	FSM	ENSG00000181163.14	ENST00000677325.1	2258	11	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	6242.98868251417	13859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTCCTTTTTGTTTAA	760	False	NA	-34	True	NA	NA	NA	171388611	171411810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_115706.known	chr5	+	2506	10	FSM	ENSG00000181163.14	ENST00000677600.1	2506	10	0	0	0	0	multi-exon	FALSE	canonical	2	214	junction_1	8249.11046308017	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	2	True	NA	-2	True	AATAAA	-6	NA	171387853	171410868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_115707.known	chr5	+	1263	10	FSM	ENSG00000181163.14	ENST00000521672.6	1263	10	0	0	0	0	multi-exon	FALSE	canonical	2	214	junction_1	6498.01663377676	2160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	NA	False	NA	3	True	AATAAA	-11	NA	171387798	171410873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_115746.known	chr5	+	2600	11	FSM	ENSG00000181163.14	ENST00000677467.1	2600	11	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_9	5787.62785258347	14779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	NA	False	NA	-15	True	AATATA	-6	NA	171387826	171410855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_115747.known	chr5	+	1237	10	FSM	ENSG00000181163.14	ENST00000351986.10	1237	10	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_7	6278.76010406867	11272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	NA	False	NA	14	True	AATAAA	-22	NA	171387828	171410884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
transcript_115748.known	chr5	+	1346	12	FSM	ENSG00000181163.14	ENST00000677357.1	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	7990.83906681492	7217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	-9	True	NA	17	True	AATAAA	-25	NA	171387842	171410887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407128_171407162_171407699_171407775_171410526
transcript_115749.known	chr5	+	268	2	FSM	ENSG00000181163.14	ENST00000523339.1	268	2	0	0	0	0	multi-exon	FALSE	canonical	3	21168	junction_1	0	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTCAGCCTTTTA	0	True	NA	73	True	AATAAA	-12	NA	171387851	171390163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050
transcript_11575.known	chr1	+	2319	14	FSM	ENSG00000158864.13	ENST00000496553.6	2319	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	357.625171532443	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	2376	False	NA	9	True	AATAAA	-16	NA	161201680	161214381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161202481_161203402_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_115750.known	chr5	+	883	5	FSM	ENSG00000181163.14	ENST00000677297.1	883	5	0	0	0	0	multi-exon	FALSE	canonical	1	65	junction_3	8711.00973983499	5093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	NA	False	NA	14	True	AATAAA	-22	NA	171387756	171410884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171407699_171407775_171410526
transcript_115751.known	chr5	+	1289	11	FSM	ENSG00000181163.14	ENST00000678774.1	1289	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6283.24645386444	3149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	0	True	NA	-2	True	AATAAA	-6	NA	171387851	171410868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392983_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_115752.known	chr5	+	3605	10	FSM	ENSG00000181163.14	ENST00000676625.1	3605	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_5	1244.47026758922	6844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	NA	False	NA	-2	True	AATAAA	-6	NA	171387827	171410868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171407775_171410526
transcript_115753.known	chr5	+	2674	10	FSM	ENSG00000181163.14	ENST00000678186.1	2674	10	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_7	8047.95416377493	3957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	NA	False	NA	14	True	AATAAA	-22	NA	171387694	171410884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171406396_171407775_171410526
transcript_115754.known	chr5	+	1936	10	FSM	ENSG00000181163.14	ENST00000676504.1	1936	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_5	1219.42955698328	3655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATAAAGTAGCACGG	NA	False	NA	0	True	AATAAA	-8	NA	171387830	171410870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400926_171405301_171405404_171407699_171407775_171410526
transcript_115755.known	chr5	+	1072	8	FSM	ENSG00000181163.14	ENST00000679233.1	1072	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	9014.59844148504	3214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGACAATAATTTTGAA	-9	True	NA	-5	True	AATAAA	-26	NA	171387842	171406736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171405301_171405404_171406396
transcript_115756.known	chr5	+	794	5	FSM	ENSG00000181163.14	ENST00000679190.1	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8739.06415184143	4676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	NA	False	NA	17	True	AATAAA	-25	NA	171387817	171410887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391413_171407718_171407775_171410526
transcript_115757.known	chr5	+	1571	10	FSM	ENSG00000181163.14	ENST00000521260.2	1571	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_4	1011.6003944368	2268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	0	True	NA	3	True	AATAAA	-11	NA	171387851	171410873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_115758.known	chr5	+	1382	10	FSM	ENSG00000181163.14	ENST00000518587.2	1382	10	0	0	0	0	multi-exon	FALSE	canonical	3	19193	junction_9	932.916031048698	2632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	0	True	NA	-2	True	AATAAA	-6	NA	171387851	171410868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_115759.known	chr5	+	2459	10	FSM	ENSG00000181163.14	ENST00000677741.1	2459	10	0	0	0	0	multi-exon	FALSE	canonical	3	18185	junction_4	1231.27198106593	2134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	5	True	NA	3	True	AATAAA	-11	NA	171387856	171410873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_11576.known	chr1	+	1508	13	FSM	ENSG00000158864.13	ENST00000677948.1	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	469.236791680562	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	-2	True	NA	9	True	AATAAA	-16	NA	161202364	161214381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209842_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_115760.known	chr5	+	2627	11	FSM	ENSG00000181163.14	ENST00000677672.1	2627	11	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	7948.21517637765	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	768	False	NA	14	True	AATAAA	-22	NA	171388619	171410884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_115761.known	chr5	+	640	2	FSM	ENSG00000181163.14	ENST00000524204.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	19193	junction_1	0	4301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	9674	False	NA	14	True	AATAAA	-22	NA	171407492	171410884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171407775_171410526
transcript_115766.known	chr5	-	5892	19	FSM	ENSG00000072786.13	ENST00000176763.10	5892	19	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_9	20.899229119223	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGTTCAGGTTGTTCT	-1	True	NA	NA	False	AATAAA	-13	NA	172188224	172042078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172045023_172052928_172053043_172054568_172054695_172055587_172055777_172057348_172057474_172061138_172061269_172064719_172064813_172082325_172082506_172082960_172083085_172090231_172090363_172093411_172093961_172096425_172096561_172105655_172105738_172106619_172106815_172107779_172107853_172117480_172117631_172127372_172127422_172156623_172156789_172187886
transcript_115767.known	chr5	-	2988	3	FSM	ENSG00000168246.6	ENST00000393792.3	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_2	7	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTCTTTGCCTTTA	12	True	NA	-20	True	AAAAAG	-11	NA	172283764	172209645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172212228_172234121_172234359_172283595
transcript_11577.known	chr1	+	1696	12	FSM	ENSG00000158864.13	ENST00000678532.1	1696	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	486.435661616788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTACTAAAAAAGGAGAA	-2	True	NA	-37	True	NA	NA	NA	161202364	161214335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209842_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863
transcript_115771.known	chr5	-	390	2	FSM	ENSG00000174705.13	ENST00000523651.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGTGTCTATGGATTT	NA	False	NA	-1	True	AATAAA	-36	NA	172334235	172333498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172333770_172334116
transcript_115772.known	chr5	-	192	1	FSM	ENSG00000253683.1	ENST00000520566.1	192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTCCTTGTGCCTG	6	True	NA	NA	False	AAAAAG	-1	NA	172656713	172656521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172656500_172656700
transcript_115773.known	chr5	-	2013	4	FSM	ENSG00000120129.6	ENST00000239223.4	2013	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	3.29983164553722	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAACGCTTTTATTTCTT	0	True	NA	-4	True	AATAAA	-21	NA	172771195	172768095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172769133_172769574_172769795_172770160_172770307_172770585
transcript_115774.known	chr5	+	2903	10	FSM	ENSG00000113719.17	ENST00000393784.8	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_8	18.7603469393279	1311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGTGTGATTCTTTC	-4	True	NA	29	True	ATTAAA	-18	NA	172834250	172952683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172924004_172924110_172926508_172926570_172932435_172932537_172935187_172935311_172950708
transcript_115778.known	chr5	+	742	4	FSM	ENSG00000037241.7	ENST00000521476.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	393.146565827838	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACATAGTATTTGCATT	8	True	NA	23	True	AATAAA	-20	NA	172958892	172969721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172959008_172959864_172960042_172968458_172968600_172969412
transcript_115781.known	chr5	+	679	4	FSM	ENSG00000037241.7	ENST00000519239.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	379.484152794583	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACATAGTATTTGC	13	True	NA	20	True	AATAAA	-17	NA	172959459	172969718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172959515_172959864_172960042_172968458_172968600_172969412
transcript_115786.known	chr5	+	722	4	FSM	ENSG00000037241.7	ENST00000265100.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	191.628691890217	3537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCAGTCTTTT	-23	True	NA	11	True	AATAAA	-17	NA	172959423	172969771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172959469_172959864_172960042_172968458_172968600_172969412
transcript_115787.known	chr5	+	695	4	FSM	ENSG00000037241.7	ENST00000519974.5	695	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	409.636424161719	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTCCACATAGTATTT	4491	False	NA	18	True	AATAAA	-15	NA	172958728	172969716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172958802_172959864_172960042_172968458_172968600_172969412
transcript_115793.known	chr5	+	773	3	FSM	ENSG00000113732.9	ENST00000265093.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	820.5	1968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCTCGGTGTTTGTAA	9	True	NA	34	True	AATAAA	-24	NA	172983815	173034892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172983965_173020237_173020368_173034398
transcript_115794.known	chr5	+	1419	4	FSM	ENSG00000113732.9	ENST00000519374.6	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_2	45.7917993628651	7332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCATGGCTTTTTGAC	-36	True	NA	15	True	ATTAAA	-25	NA	172983770	173035445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172983965_172994774_172994823_173020237_173020368_173034398
transcript_115795.known	chr5	+	718	3	FSM	ENSG00000113732.9	ENST00000519911.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	820.5	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAATCTGGGCTCGGT	-26	True	NA	26	True	AATAAA	-16	NA	172983780	173034884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172983965_172994774_172994823_173034398
transcript_115796.known	chr5	+	502	3	FSM	ENSG00000113732.9	ENST00000517669.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_2	50	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCTATCACCCTGC	24	True	NA	NA	False	NA	NA	NA	172983830	173020557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172983965_172994774_172994823_173020237
transcript_115797.known	chr5	+	7778	9	FSM	ENSG00000164463.12	ENST00000296953.6	7778	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	7.45716936913733	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTGAATTGTTTGCCTC	-23	True	NA	NA	False	AATAAA	-18	NA	173056351	173139284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314_173091402_173108623_173108819_173110521_173110712_173112305_173112380_173123079_173123203_173133629
transcript_115805.known	chr5	+	1660	4	FSM	ENSG00000164463.12	ENST00000520420.5	1660	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	5.73488351136175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAATTGGTTTTTCTA	-7	True	NA	NA	False	ATTAAA	-21	NA	173056367	173091536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314
transcript_115807.known	chr5	+	1339	7	FSM	ENSG00000113734.18	ENST00000231668.13	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	62.9197019135413	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTTTATTTAATAGA	NA	False	NA	-12	True	AAGAAA	-34	NA	173144441	173164340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173144630_173146865_173146959_173151565_173151695_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_115808.known	chr5	+	1143	6	FSM	ENSG00000113734.18	ENST00000352523.10	1143	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	71.8203313832511	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGATTTTATTTAATAGAA	6	True	NA	-11	True	AATAAA	-1	NA	173144536	173164341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173144630_173146865_173146959_173151565_173151695_173154321_173154414_173159932_173160052_173163724
transcript_115809.known	chr5	+	1168	6	FSM	ENSG00000113734.18	ENST00000351486.10	1168	6	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	11.6378692207809	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTGGGAATGTGTGTT	0	True	NA	35	True	AATAAA	-23	NA	173144530	173164387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_11581.known	chr1	-	9777	9	FSM	ENSG00000158859.10	ENST00000367996.6	9777	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.17526131928308	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTCTTCCTTTGTCTGCT	-2	True	NA	NA	False	AATAAA	-21	NA	161199054	161184301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161191565_161192064_161192241_161193212_161193389_161193639_161193827_161193934_161194222_161195464_161195636_161196170_161196304_161196556_161196881_161197994
transcript_115812.known	chr5	+	721	5	FSM	ENSG00000113734.18	ENST00000393770.4	721	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	65.1819568592414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCACTTTTCTGCAAGTA	15	True	NA	NA	False	NA	NA	NA	173144545	173164057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173159932_173160052_173163724
transcript_115816.known	chr5	-	4254	4	FSM	ENSG00000113739.11	ENST00000265087.9	4254	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	8.73053390247253	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTTGAGTAGCGTCAT	1	True	NA	-18	True	AATAAA	-18	NA	173328414	173314722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_173318250_173323218_173323431_173325867_173326011_173328042
transcript_115817.known	chr5	-	582	2	FSM	ENSG00000113739.11	ENST00000519511.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAGCATACATGATTGAA	-1	True	NA	NA	False	NA	NA	NA	173328447	173325833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_173326011_173328042
transcript_115820.known	chr5	-	850	3	FSM	ENSG00000145919.11	ENST00000477985.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	442.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGATAGCTTTAAAGTTG	436	False	NA	NA	False	NA	NA	NA	173616358	173607798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_173608293_173609237_173609435_173616199
transcript_115822.known	chr5	+	1670	7	FSM	ENSG00000113742.14	ENST00000657000.1	1670	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.9462219947249	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGCTAGGTTTATTTT	3	True	NA	NA	False	AATAAA	-18	NA	173918200	173956845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173918255_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_115826.known	chr5	+	2511	5	FSM	ENSG00000185056.10	ENST00000340147.7	2511	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.08972473588517	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTCCTGCCTTCTCTT	-3	True	NA	NA	False	ATTAAA	-15	NA	173989169	174006140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173989589_173998152_173998239_173999699_173999800_174001195_174001232_174004270
transcript_115833.known	chr5	+	4066	11	FSM	ENSG00000164466.13	ENST00000321442.10	4066	11	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_9	90.4416386406173	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTTTATTTGTACA	-6	True	NA	-14	True	AATAAA	-18	NA	175478559	175529742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374_175522423_175526637
transcript_11584.known	chr1	-	1961	2	FSM	ENSG00000158859.10	ENST00000367995.3	1961	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGAACTCCTCTGTGT	-1	True	NA	NA	False	AATAAA	-16	NA	161199053	161195978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161196881_161197994
transcript_115845.nic	chr5	+	1000	7	ISM	ENSG00000164466.13	ENST00000321442.10	4066	11	-39	16004	-39	0	5prime_fragment	FALSE	canonical	3	697	junction_6	58.7832648142498	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTATGTGCAGTGGTG	6	True	NA	11	True	AATAAA	-15	NA	175478520	175513738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462
transcript_11585.known	chr1	+	2042	15	FSM	ENSG00000158864.13	ENST00000367993.7	2042	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	346.103330388661	7572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTATCTTAGTGTCT	10	False	NA	23	True	AATAAA	-30	NA	161199314	161214395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161199524_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_115851.known	chr5	+	637	5	FSM	ENSG00000164466.13	ENST00000502393.5	637	5	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_2	31.666228067138	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTAAATCCCTCTATT	9	True	NA	NA	False	AATAAA	-26	NA	175478574	175511579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450
transcript_115855.known	chr5	+	592	3	FSM	ENSG00000164466.13	ENST00000508290.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	410.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAGACAA	-2	True	NA	NA	False	AAAACA	-31	NA	175478563	175509403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175478640_175492094_175492268_175509060
transcript_115856.known	chr5	+	527	2	FSM	ENSG00000164466.13	ENST00000507395.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGATAGCACCACCACCT	-1	True	NA	NA	False	NA	NA	NA	175478564	175492546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175478640_175492094
transcript_115858.nnic	chr5	+	708	4	NNC	ENSG00000113749.8	novel	4664	3	NA	NA	0	-3140	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.942809041582063	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACTGGACACAT	1	True	NA	NA	False	NA	NA	NA	175658070	175683102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_175658156_175660005_175660143_175660599_175660692_175682708
transcript_11586.known	chr1	+	1296	12	FSM	ENSG00000158864.13	ENST00000676795.1	1296	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	385.734568096759	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	5	True	NA	9	True	AATAAA	-16	NA	161202371	161214381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161202481_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_115860.known	chr5	+	2561	3	FSM	ENSG00000113749.8	ENST00000377291.2	2561	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	20.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTGCCACTCTTGGGT	8	True	NA	5	True	TATAAA	-29	NA	175658029	175686242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175658156_175682708_175684310_175685408
transcript_115867.nnic	chr5	-	1558	7	NNC	ENSG00000051596.10	novel	1601	6	NA	NA	-18	28	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	303.932923886541	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCATTTTCCTTTTCC	NA	False	NA	NA	False	AGTAAA	-15	NA	175968333	175917844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_175918173_175959919_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_115872.nic	chr5	-	2513	6	NIC	ENSG00000051596.10	novel	1796	5	NA	NA	-18	1196	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	319.92411600253	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGGTTCCGTGTATT	NA	False	NA	0	True	AATAAA	-22	NA	175968333	175916676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_175918173_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_115874.nic	chr5	-	1317	6	NIC	ENSG00000051596.10	novel	1796	5	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	319.92411600253	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAATAAGTAAATGTTAT	NA	False	NA	NA	False	AAAACA	-26	NA	175968333	175917872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_175918173_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_115876.known	chr5	-	1601	6	FSM	ENSG00000051596.10	ENST00000265097.9	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_1	88.2011337795609	2153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	NA	False	NA	-14	True	AATAAA	-22	NA	175968315	175959530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_115887.known	chr5	-	1796	5	FSM	ENSG00000051596.10	ENST00000513482.1	1796	5	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	75.0633066151499	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGTTAATACTGGTA	NA	False	NA	NA	False	NA	NA	NA	175968280	175960218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_115896.nnic	chr5	-	802	5	NIC	ENSG00000283235.2	novel	1111	8	NA	NA	-76	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	4.24264068711928	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTATGTCCTGTTCTTA	NA	False	NA	-5	True	AATAAA	-21	NA	176199371	176175548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176175902_176176281_176176451_176176758_176176824_176182684_176182764_176199235
transcript_11590.known	chr1	-	265	4	FSM	ENSG00000158874.11	ENST00000469730.2	265	4	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	1033.24935142599	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAGGAGCAGCTGACAC	67	False	NA	NA	False	ATTAAA	-39	NA	161223559	161222507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223518
transcript_115903.nnic	chr5	+	888	2	Genic_Genomic	ENSG00000251667.1	novel	951	1	NA	NA	-3	9	multi-exon	FALSE	canonical	3	18	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAATGGAGAAAGATGAAA	NA	False	NA	NA	False	AATAAA	-9	NA	176308059	176309022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_176308612_176308686
transcript_115906.known	chr5	-	2786	9	FSM	ENSG00000122203.15	ENST00000298569.9	2786	9	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_6	44.6764409392691	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	16	True	NA	-7	True	AATAAA	-22	NA	176361764	176346061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176359810_176359919_176361601
transcript_115908.known	chr5	-	1243	8	FSM	ENSG00000122203.15	ENST00000510164.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	232.521844486202	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCACGCCTGTA	19	True	NA	NA	False	TTTAAA	-17	NA	176361761	176347493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176361601
transcript_115909.known	chr5	-	2700	8	FSM	ENSG00000122203.15	ENST00000393725.6	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	242.836049504137	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	15	True	NA	-7	True	AATAAA	-22	NA	176361765	176346061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359810_176359919_176361601
transcript_11591.known	chr1	-	401	3	FSM	ENSG00000158874.11	ENST00000463812.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1045	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-5	True	NA	-14	True	AATAAA	-16	NA	161223631	161222291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917_161223051_161223594
transcript_115911.known	chr5	-	2631	7	FSM	ENSG00000122203.15	ENST00000614420.4	2631	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	260.338508271229	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	NA	False	NA	-10	True	AATAAA	-19	NA	176361807	176346064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176361601
transcript_115915.known	chr5	-	2452	6	FSM	ENSG00000122203.15	ENST00000620366.4	2452	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	278.238458880148	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	NA	False	NA	-10	True	AATAAA	-19	NA	176361807	176346064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176361601
transcript_115918.nic	chr5	-	2419	6	NIC	ENSG00000122203.15	novel	2786	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_3	259.302911668959	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	NA	False	NA	-7	True	AATAAA	-22	NA	176361828	176346061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176359480_176359568_176359810_176359919_176361601
transcript_115919.known	chr5	-	2243	5	FSM	ENSG00000122203.15	ENST00000393728.6	2243	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	302.566108478792	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	41	False	NA	-7	True	AATAAA	-22	NA	176361739	176346061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176359810_176359919_176361601
transcript_11592.known	chr1	-	474	4	FSM	ENSG00000158874.11	ENST00000367990.7	474	4	0	0	0	0	multi-exon	FALSE	canonical	3	1512	junction_3	337.471315653477	12513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-2	True	NA	-14	True	AATAAA	-16	NA	161223628	161222291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223594
transcript_115921.known	chr5	-	1139	6	FSM	ENSG00000175416.16	ENST00000310418.9	1139	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	128.169575172894	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-5	True	NA	-49	True	NA	NA	NA	176416539	176392500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176392946_176396478_176396533_176397606_176397719_176397929_176398048_176410256_176410304_176416176
transcript_115924.known	chr5	-	1085	5	FSM	ENSG00000175416.16	ENST00000345807.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	4.74341649025257	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-5	True	NA	-49	True	NA	NA	NA	176416539	176392500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176410256_176410304_176416176
transcript_11593.known	chr1	-	263	2	FSM	ENSG00000158874.11	ENST00000491350.1	263	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTACAATAAATGCTGAAT	218	False	NA	-41	True	NA	NA	NA	161223408	161222318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161223349
transcript_115934.known	chr5	-	881	5	FSM	ENSG00000048162.22	ENST00000614830.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	97.7177056627917	6168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGATGATTTTGTAT	-9	True	NA	-11	True	AATAAA	-15	NA	176388598	176383945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176384375_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_115935.known	chr5	-	1087	5	FSM	ENSG00000048162.22	ENST00000618911.4	1087	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	387.077188684634	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGTGTGTACATAATAA	9117	False	NA	-46	True	NA	NA	NA	176388927	176383980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176384287_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_115936.known	chr5	+	654	2	FSM	ENSG00000146066.3	ENST00000274787.3	654	2	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	0	13756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATCATCCCCATGGT	1	True	NA	36	True	AATAAA	-25	NA	176388750	176389761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_176388974_176389330
transcript_11594.known	chr1	-	927	2	FSM	ENSG00000158874.11	ENST00000481413.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	3	2141	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	13	False	NA	-14	True	AATAAA	-16	NA	161223613	161222291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917
transcript_115940.known	chr5	+	4485	11	FSM	ENSG00000113194.13	ENST00000261942.7	4485	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.996682191552	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGGCTGTGGATCTTTC	-2	True	NA	36	True	ATTAAA	-22	NA	176448384	176510074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485_176496664_176498913_176499086_176500002_176500147_176506767
transcript_115949.nic	chr5	+	1001	9	ISM	ENSG00000113194.13	ENST00000261942.7	4485	11	-75	11097	-75	0	5prime_fragment	TRUE	canonical	0	0	junction_3	117.541947299677	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCTGACCAGGAGAAAGA	NA	False	NA	7	True	NA	NA	NA	176448309	176498977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485_176496664_176498913
transcript_11595.known	chr1	-	421	4	FSM	ENSG00000158874.11	ENST00000468465.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	870.528702698666	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-5	True	NA	-14	True	AATAAA	-16	NA	161223631	161222291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917_161222995_161223349_161223426_161223594
transcript_115956.known	chr5	+	337	3	FSM	ENSG00000113194.13	ENST00000506061.1	337	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTTTTTGTTCAT	42	False	NA	NA	False	NA	NA	NA	176448428	176453559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_176448471_176453175_176453229_176453317
transcript_115958.nnic	chr5	+	490	3	NNC	ENSG00000113194.13	novel	337	3	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTTTTTGTTCAT	0	True	NA	NA	False	NA	NA	NA	176448354	176453559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_176448471_176453096_176453229_176453317
transcript_11596.known	chr1	-	469	3	FSM	ENSG00000158874.11	ENST00000463273.5	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	2141	junction_1	75	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGCCACCCAGTGAAG	41	False	NA	NA	False	NA	NA	NA	161223585	161222422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917_161223051_161223349
transcript_115964.known	chr5	-	4122	11	FSM	ENSG00000146083.12	ENST00000274811.9	4122	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	33.4366565314177	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCGCCCACGCTGCCTTT	-6	True	NA	-16	True	AATAAA	-18	NA	176537402	176526711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176529091_176529287_176529388_176529522_176529645_176529730_176529819_176530081_176530207_176530581_176530744_176530847_176531022_176531462_176531631_176532003_176532194_176532365_176532517_176536939
transcript_115965.known	chr5	-	887	5	FSM	ENSG00000146083.12	ENST00000504160.1	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	28.6792607994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCCACCACCGGCCCCA	23	True	NA	NA	False	NA	NA	NA	176537296	176530936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176531022_176531462_176531631_176532003_176532130_176532365_176532517_176536939
transcript_115966.known	chr5	-	730	6	FSM	ENSG00000074317.11	ENST00000510387.5	730	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	30.216551755619	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCCTGTGTTAGTGTCT	16	True	NA	NA	False	NA	NA	NA	176629994	176620680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176629808
transcript_115967.nnic	chr5	+	1347	7	NNC	ENSG00000175766.13	novel	514	6	NA	NA	-15	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	2.49443825784929	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATTATTTTTAAGAGG	NA	False	NA	NA	False	AATAAA	-16	NA	176642912	176646645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_176642976_176643081_176643267_176643638_176643735_176644375_176644440_176645129_176645244_176645376_176645422_176645865
transcript_115968.nic	chr5	+	1496	7	NIC	ENSG00000175766.13	novel	514	6	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	1.63299316185545	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGAATTATTTTTAAGAG	NA	False	NA	NA	False	AATAAA	-15	NA	176642857	176646644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_176642976_176643081_176643267_176643638_176643735_176644375_176644440_176645129_176645244_176645376_176645517_176645865
transcript_11597.known	chr1	-	655	3	FSM	ENSG00000158874.11	ENST00000481511.5	655	3	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_2	1056.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGAGCCTGGTATGTT	201	False	NA	-15	True	AATAAA	-15	NA	161223425	161222292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917_161223267_161223349
transcript_115970.known	chr5	+	564	5	FSM	ENSG00000175766.13	ENST00000503895.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.92028643696715	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGTGGTCTCAAGGATGG	2	True	NA	NA	False	NA	NA	NA	176642927	176645300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_176642976_176643081_176643267_176643638_176643735_176644375_176644440_176645129
transcript_115972.known	chr5	+	2475	9	FSM	ENSG00000048140.18	ENST00000508164.6	2475	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_8	49.8395864248491	700	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCATGTGTCTTGCATT	-3	True	NA	35	True	AATAAA	-15	NA	176647483	176659051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_176647703_176651615_176651667_176651753_176651901_176652742_176652914_176654894_176655021_176656077_176656126_176656699_176656817_176656894_176656957_176657517
transcript_115979.known	chr5	-	2570	15	FSM	ENSG00000087206.17	ENST00000377227.8	2570	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.8393848849912	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCCTTCATGTTGC	343	False	NA	3	True	AATAGA	-14	NA	177006408	176905004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006283
transcript_11598.known	chr1	+	2790	10	FSM	ENSG00000158882.15	ENST00000367988.8	2790	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.43332678968494	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATGTTTCACCAACCC	0	True	NA	12	True	AGTAAA	-17	NA	161226059	161230746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_115980.nic	chr5	-	2641	15	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	45.0885749590374	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-28	True	NA	-42	True	AATATA	-1	NA	177006779	176905049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_115981.known	chr5	-	2467	15	FSM	ENSG00000087206.17	ENST00000512031.5	2467	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	42.366777993506	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATGTTTGTACGAAA	36	True	NA	-45	True	TTTAAA	-2	NA	177006715	176905052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969596_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_115983.known	chr5	-	1945	15	FSM	ENSG00000087206.17	ENST00000506128.5	1945	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	55.7092030648658	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	170	False	NA	-42	True	AATATA	-1	NA	177006581	176905049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969052_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_115991.nic	chr5	-	1770	14	NIC	ENSG00000087206.17	novel	1945	15	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	46.4983298039426	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	106	False	NA	-42	True	AATATA	-1	NA	177006645	176905049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_115992.nic	chr5	-	1825	14	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	43.5739186960795	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-60	False	NA	-42	True	AATATA	-1	NA	177006811	176905049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_115997.nnic	chr5	-	1798	13	NIC	ENSG00000087206.17	novel	1945	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	46.7994390992029	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-28	True	NA	-42	True	AATATA	-1	NA	177006779	176905049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_115998.nnic	chr5	-	1719	13	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_9	43.5666794185138	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	-60	False	NA	-42	True	AATATA	-1	NA	177006811	176905049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_11601.known	chr1	+	2807	9	FSM	ENSG00000158882.15	ENST00000545897.5	2807	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.0792526117647	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCAATGTTTCACCAAC	2572	False	NA	10	True	AGTAAA	-15	NA	161225938	161230744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_116010.nic	chr5	-	994	5	ISM	ENSG00000087206.17	ENST00000506128.5	1945	15	-198	64269	0	-36	5prime_fragment	FALSE	canonical	3	59	junction_4	36.922215534824	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTACTTTTTCTCAAATA	-28	True	NA	-5	True	AATAAA	-15	NA	177006779	176969318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_116011.nic	chr5	-	915	5	ISM	ENSG00000087206.17	ENST00000511320.6	2574	15	-32	64313	-32	-36	5prime_fragment	FALSE	canonical	3	90	junction_4	24.6107192093202	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTACTTTTTCTCAAATA	-60	False	NA	-5	True	AATAAA	-15	NA	177006811	176969318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_116019.known	chr5	+	2306	7	FSM	ENSG00000113761.12	ENST00000511834.5	2306	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	50.1356493259371	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	2	True	NA	24	True	AATAAA	-15	NA	177022731	177065965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050702_177050937_177062057_177062152_177064511
transcript_116020.known	chr5	+	4314	7	FSM	ENSG00000113761.12	ENST00000358149.8	4314	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	24.1344612996069	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCTGAAAAAGGTATCA	-7	True	NA	NA	False	AATAAA	-35	NA	177022695	177067985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050750_177050937_177062057_177062152_177064511
transcript_116024.known	chr5	+	1622	6	FSM	ENSG00000113761.12	ENST00000508155.5	1622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	58.5101700561535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTACCCTCGGCCCT	13	True	NA	NA	False	NA	NA	NA	177022715	177065458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177050750_177050937_177062057_177062152_177064511
transcript_116026.known	chr5	+	977	5	FSM	ENSG00000113761.12	ENST00000513587.5	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	56.5790376376269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGGGCAGGGCAGGA	5	False	NA	NA	False	NA	NA	NA	177022734	177065018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177062057_177062152_177064511
transcript_116029.known	chr5	+	2733	18	FSM	ENSG00000160867.15	ENST00000393648.6	2733	18	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_9	134.488162095943	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCGTCTTGACGGGAG	-4	True	NA	-88	True	NA	NA	NA	177086904	177098022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093178_177093405_177093502_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_116030.known	chr5	+	2638	18	FSM	ENSG00000160867.15	ENST00000502906.5	2638	18	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	52.3177674306476	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGCCTGACACAGTGC	5	True	NA	NA	False	GGGGCT	-3	NA	177086913	177097732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_116031.known	chr5	+	3093	18	FSM	ENSG00000160867.15	ENST00000292408.9	3093	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	94.0906211197427	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	6	True	NA	34	True	AATAAA	-19	NA	177086914	177098144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177087078_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_116053.nnic	chr5	+	1779	6	FSM	ENSG00000165671.22	ENST00000508896.6	1436	6	-343	0	-343	0	multi-exon	FALSE	canonical	3	49	junction_1	43.8570404838265	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	NA	False	NA	NA	False	GATAAA	-1	NA	177131486	177210453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177131935_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_116057.nic	chr5	+	1689	6	ISM	ENSG00000165671.22	ENST00000354179.9	12136	24	-282	89698	-228	0	5prime_fragment	FALSE	canonical	3	14	junction_1	57.7220928241518	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	965	False	NA	NA	False	GATAAA	-1	NA	177132796	177210453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133155_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_116059.known	chr5	+	585	6	ISM	ENSG00000165671.22	ENST00000686993.1	12157	24	0	90541	0	-396	5prime_fragment	FALSE	canonical	0	0	junction_1	63.2847532980891	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGACTTGCAGAACAGTAT	-7	True	NA	NA	False	AGTAAA	-14	NA	177133599	177209672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133635_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_116061.nic	chr5	+	1545	6	ISM	ENSG00000165671.22	ENST00000689345.1	12113	24	-161	89698	-29	0	5prime_fragment	FALSE	canonical	3	134	junction_1	11.6206712370672	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTCTAGGTTTGCTGCCA	63	False	NA	NA	False	GATAAA	-1	NA	177133738	177210453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133953_177135086_177135201_177135940_177136031_177191883_177192020_177204119_177204293_177209635
transcript_11607.known	chr1	+	2396	7	FSM	ENSG00000158882.15	ENST00000474486.5	2396	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	18.2665450117603	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCAGTATCCAAATAC	0	True	NA	43	True	AATAAA	-26	NA	161226059	161230615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161226137_161226354_161226605_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_116074.known	chr5	+	533	5	ISM	ENSG00000165671.22	ENST00000354179.9	12136	24	0	95915	0	-5832	5prime_fragment	FALSE	canonical	3	14	junction_1	62.1022342593244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTGTCCTTAGGAGA	55	False	NA	NA	False	NA	NA	NA	177133078	177204236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133155_177135086_177135201_177135940_177136031_177191883_177192020_177204119
transcript_11608.known	chr1	+	1406	3	FSM	ENSG00000248485.2	ENST00000504449.2	1406	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	0.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTTTTTCTTGGGA	1	True	NA	11	True	AATAAA	-32	NA	161258744	161285450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161258984_161283667_161283723_161284338
transcript_11609.known	chr1	-	1951	6	FSM	ENSG00000158887.19	ENST00000533357.5	1951	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.8	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCCTTGTCTAGAAT	-2	True	NA	-2	True	AATAAA	-18	NA	161309968	161304734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161305978_161306107_161306169_161306328_161306465_161306707_161306922_161307257_161307425_161309838
transcript_116099.nnic	chr5	+	859	3	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-240	74113	-240	-5	5prime_fragment	FALSE	canonical	3	49	junction_1	56	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	177131589	177136340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177131935_177135086_177135201_177135940
transcript_11610.known	chr1	-	366	2	FSM	ENSG00000158887.19	ENST00000488271.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACAAGTGATCGCCACCC	20	True	NA	NA	False	NA	NA	NA	161306190	161305694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161305978_161306107
transcript_116102.nic	chr5	+	872	3	ISM	ENSG00000165671.22	ENST00000354179.9	12136	24	-282	163811	-228	-5	5prime_fragment	FALSE	canonical	3	14	junction_1	73.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	965	False	NA	NA	False	ATTAAA	-9	NA	177132796	177136340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133155_177135086_177135201_177135940
transcript_116106.nic	chr5	+	728	3	ISM	ENSG00000165671.22	ENST00000510954.6	1706	7	-115	102865	-29	-5	5prime_fragment	FALSE	canonical	3	134	junction_1	13.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	63	False	NA	NA	False	ATTAAA	-9	NA	177133738	177136340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133953_177135086_177135201_177135940
transcript_116114.nnic	chr5	+	2288	2	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-929	74113	-929	-5	intron_retention	FALSE	canonical	3	49	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	177130900	177136340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177131935_177135086
transcript_116115.known	chr5	+	470	2	ISM	ENSG00000165671.22	ENST00000689549.1	7734	20	0	149938	0	-919	5prime_fragment	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCCAATTGTTTGCACTT	1	True	NA	NA	False	AAAAAG	-16	NA	177133024	177135426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133155_177135086
transcript_116117.known	chr5	+	1414	2	FSM	ENSG00000165671.22	ENST00000602285.1	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	14	True	NA	NA	False	ATTAAA	-14	NA	177133797	177136345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177133953_177135086
transcript_116122.known	chr5	-	1236	9	FSM	ENSG00000169228.14	ENST00000393611.6	1236	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	41.6876405544857	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-4	True	NA	-5	True	AATAAA	-22	NA	177303706	177301450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_116123.nic	chr5	-	1492	8	NIC	ENSG00000169228.14	novel	1236	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	38	junction_7	43.0116263352131	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	8526	False	NA	-5	True	AATAAA	-22	NA	177303744	177301450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_116127.known	chr5	-	1483	6	FSM	ENSG00000213347.11	ENST00000439742.7	1067	6	-411	-5	-411	3	multi-exon	FALSE	canonical	3	86	junction_1	6.43117407632541	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCCATAGTCTTGCCTAAT	NA	False	NA	-4	True	ATTAAA	-20	NA	177312309	177307204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177307704_177307780_177307965_177310425_177310541_177310667_177310698_177311378_177311485_177311760
transcript_116130.known	chr5	+	1226	5	FSM	ENSG00000169230.10	ENST00000303204.9	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	4959	junction_3	178.612709514189	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCCCAGCTCTGGAGT	5	True	NA	14	True	AATAAA	-16	NA	177303798	177306949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177304078_177304624_177304851_177305870_177305985_177306097_177306177_177306421
transcript_116140.known	chr5	-	1820	7	FSM	ENSG00000169228.14	ENST00000478234.5	1820	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	9.77098880473324	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	4	True	NA	-27	True	AATAAA	-23	NA	177303733	177301197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_116141.known	chr5	-	1588	8	FSM	ENSG00000169228.14	ENST00000303251.11	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	19.7484176581315	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-17	True	NA	-27	True	AATAAA	-23	NA	177303719	177301197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_116142.known	chr5	-	1608	6	FSM	ENSG00000169228.14	ENST00000495458.5	1608	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.4	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCCCTTTCCCTGCT	21	True	NA	-6	True	AATAAA	-21	NA	177303681	177301451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008
transcript_116148.known	chr5	-	1611	8	FSM	ENSG00000169223.15	ENST00000303127.12	1611	8	0	0	0	0	multi-exon	FALSE	canonical	3	2229	junction_4	150.905701059453	4539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-6	True	NA	-32	True	AATAAA	-14	NA	177351668	177331566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_116149.known	chr5	-	1149	8	FSM	ENSG00000169223.15	ENST00000515209.5	1149	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	856.973530894077	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCGGGATTATAAAAG	15	True	NA	-86	True	NA	NA	NA	177351647	177332030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177332270_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_116151.nic	chr5	+	1848	10	ISM	ENSG00000169220.18	ENST00000511890.1	1536	11	365	-298	5	0	3prime_fragment	FALSE	canonical	3	53	junction_3	30.0813711271426	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9422	False	NA	9	True	NA	NA	NA	177367307	177372596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_116154.nnic	chr5	+	1732	9	NIC	ENSG00000169220.18	novel	1536	11	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	41.7185510294881	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	9426	False	NA	9	True	NA	NA	NA	177367311	177372596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_177367558_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_116156.known	chr5	+	875	5	FSM	ENSG00000169220.18	ENST00000514102.5	875	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	22.1528779168757	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGCCAGGCCACAATG	155	False	NA	NA	False	NA	NA	NA	177370820	177372292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_116158.nic	chr5	+	1071	4	NIC	ENSG00000169220.18	novel	2329	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	53.1747642736247	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	148	False	NA	9	True	NA	NA	NA	177370813	177372596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_177371032_177371164_177371247_177371349_177371397_177371872
transcript_116159.nic	chr5	+	1249	4	NIC	ENSG00000169220.18	novel	2329	8	NA	NA	8	0	intron_retention	FALSE	canonical	3	91	junction_1	23.6830928911088	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	163	False	NA	9	True	NA	NA	NA	177370828	177372596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_177371032_177371164_177371247_177371349_177371590_177371872
transcript_116162.known	chr5	+	1660	13	FSM	ENSG00000198055.11	ENST00000507633.5	1660	13	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_8	40.5931712921712	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGATGGGTCTGGCT	23	False	NA	22	True	AATAAA	-22	NA	177426744	177436685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392
transcript_116169.known	chr5	-	1573	4	FSM	ENSG00000131187.10	ENST00000510358.5	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.6418242755334	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCAATAAAGTGCTTT	5107	False	NA	-40	True	NA	NA	NA	177404472	177402171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480
transcript_11617.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000392169.6	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	417.591773013896	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGCTCCCAGCAT	6	True	NA	NA	False	GGGGCT	-14	NA	161314387	161362433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161340593_161340656_161356676_161356841_161362328
transcript_116171.known	chr5	-	421	2	FSM	ENSG00000246334.3	ENST00000506465.2	1190	2	284	485	1	-485	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACGCCTGTGGAGAAT	9595	False	NA	NA	False	NA	NA	NA	177447698	177445978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177446345_177447643
transcript_116174.known	chr5	-	943	3	FSM	ENSG00000131187.10	ENST00000504406.5	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGCTTTGAAAATGCT	-8	True	NA	-31	True	NA	NA	NA	177403750	177402162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177402460_177402549_177402699_177403253
transcript_116176.known	chr5	-	2995	14	FSM	ENSG00000113758.14	ENST00000309007.9	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_6	129.320207146182	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCGCCTGCCCTGACC	9754	False	NA	-37	True	AATAAA	-19	NA	177473741	177456607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
transcript_116180.known	chr5	-	2667	13	FSM	ENSG00000113758.14	ENST00000472831.5	2667	13	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_6	131.32495214374	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCCCTCCCCG	11	True	NA	-23	True	AATAAA	-19	NA	177473624	177456933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467818_177468107_177468221_177468843_177468900_177473435
transcript_116188.known	chr5	-	1686	14	FSM	ENSG00000196923.14	ENST00000493815.5	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	161.178426618144	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	5088	False	NA	-8	True	AATAAA	-17	NA	177497561	177483393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_116193.known	chr5	-	1712	13	FSM	ENSG00000196923.14	ENST00000355841.7	1712	13	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	124.510262852327	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-2	True	NA	-8	True	AATAAA	-17	NA	177497604	177483393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_11620.known	chr1	+	1308	6	FSM	ENSG00000143252.16	ENST00000367975.7	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	75.8171484560057	20595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAGAGAAACCAAGAAAAT	-1	True	NA	12	True	ATTAAA	-31	NA	161314380	161363206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161356676_161356841_161362328
transcript_116202.nic	chr5	-	1058	9	NIC	ENSG00000196923.14	novel	977	8	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_3	193.039463258164	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	5012	False	NA	-19	True	AATAAA	-15	NA	177497637	177490245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_177490594_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_11621.known	chr1	+	1127	5	FSM	ENSG00000143252.16	ENST00000342751.8	1127	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	342.801691944483	16657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTCTCCTTGAAATCT	-1	True	NA	-5	True	ATTAAA	-14	NA	161314380	161363189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161362328
transcript_116211.known	chr5	-	977	8	FSM	ENSG00000196923.14	ENST00000355572.6	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	111.535296874934	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	5076	False	NA	-19	True	AATAAA	-15	NA	177497573	177490245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_11622.known	chr1	+	460	5	FSM	ENSG00000143252.16	ENST00000432287.6	460	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	352.81333591575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATTATTACATTCACC	0	True	NA	NA	False	AAGAAA	-24	NA	161314381	161362461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161356676_161356841_161362328
transcript_116222.known	chr5	-	2099	17	FSM	ENSG00000183258.12	ENST00000330503.12	2099	17	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_16	41.6005934452863	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-2	True	NA	-17	True	ATTAAA	-19	NA	177516961	177511576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724_177516836_177516918
transcript_11623.known	chr1	+	571	7	FSM	ENSG00000143252.16	ENST00000504963.5	571	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	411.183961263082	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTCCTACACATTATT	9	False	NA	NA	False	AAGAAA	-15	NA	161314390	161362452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161339561_161339589_161340593_161340656_161356676_161356841_161362328
transcript_116232.known	chr5	-	580	2	FSM	ENSG00000146067.16	ENST00000506879.5	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGCATGTTGGTGATT	NA	False	NA	-2	True	GATAAA	-17	NA	177522162	177519790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177520182_177521973
transcript_116235.known	chr5	+	1064	6	FSM	ENSG00000027847.14	ENST00000505433.5	1064	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	68.5349545852334	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAAGCCTGTACCTAC	4	True	NA	NA	False	NA	NA	NA	177600161	177609707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177600261_177604178_177604542_177607282_177607528_177608538_177608623_177608909_177609015_177609539
transcript_116239.known	chr5	+	410	2	FSM	ENSG00000027847.14	ENST00000507061.1	410	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGCCTCTGGTCCCTTG	404	False	NA	8	True	ATTAAA	-20	NA	177604311	177605224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177604542_177605044
transcript_11624.known	chr1	-	774	5	FSM	ENSG00000188931.4	ENST00000367974.2	774	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.58113883008419	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGATCTGGATTTTCCAT	2	True	NA	-1	True	AATAAA	-21	NA	161367876	161364732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161365151_161365525_161365703_161366197_161366279_161366438_161366502_161367841
transcript_116241.known	chr5	+	1056	6	FSM	ENSG00000170089.16	ENST00000512851.5	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_5	142.927394155214	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTTGTAGGGAGAGGA	32	False	NA	NA	False	NA	NA	NA	177875594	177883831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651_177882753_177883666
transcript_11625.known	chr1	+	805	3	FSM	ENSG00000143226.15	ENST00000461298.1	805	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGCCTCAGATTTTTCCT	1923	False	NA	NA	False	ACTAAA	-10	NA	161513376	161518590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161513528_161513894_161513933_161517974
transcript_116250.nnic	chr5	-	730	4	Antisense	novelGene_ENSG00000145911.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	2	junction_3	2.16024689946929	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGCATTAAAGTAAATTAA	NA	False	NA	NA	False	AATAAA	-16	NA	178115322	178088501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_178088705_178091088_178091189_178093224_178093390_178115060
transcript_116253.known	chr5	+	4066	12	FSM	ENSG00000145916.19	ENST00000515098.5	4066	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	135.441244008287	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGTCTCACTTTG	NA	False	NA	3	True	ATTAAA	-15	NA	178130995	178150565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178131055_178131236_178131377_178135172_178135313_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_116255.known	chr5	+	3911	11	FSM	ENSG00000145916.19	ENST00000313386.9	3911	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	69.2257899918809	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCACTTTGTTG	-6	True	NA	6	True	ATTAAA	-18	NA	178131013	178150568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178131055_178131236_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_116265.known	chr5	-	780	4	FSM	ENSG00000145912.9	ENST00000274606.8	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	5082	junction_2	201.939484884843	27318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGAGTCTGTGGGTGT	5	True	NA	NA	False	AGTAAA	-15	NA	178153885	178149462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178149839_178150887_178150994_178153490_178153561_178153657
transcript_11627.known	chr1	-	372	1	FSM	ENSG00000213075.7	ENST00000454082.1	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCTGATCGTCAAATACAT	1938	False	NA	NA	False	NA	NA	NA	161685209	161684837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161684800_161685200
transcript_116272.known	chr5	-	599	3	FSM	ENSG00000145912.9	ENST00000314397.8	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	2489	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATGCTAAGACTAAAAT	110	False	NA	NA	False	ACTAAA	-30	NA	178153829	178149481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178149839_178153490_178153561_178153657
transcript_116273.known	chr5	-	2081	13	FSM	ENSG00000175309.15	ENST00000308158.10	2081	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	10.0069420348521	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAGTAGTTTCACTTAA	-7	True	NA	97	True	ATTAAA	-45	NA	178232802	178208470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178208916_178211889_178211971_178212972_178213104_178214795_178214886_178215275_178215431_178222354_178222581_178222851_178222935_178224447_178224565_178224641_178224730_178225354_178225430_178229939_178230100_178231404_178231524_178232491
transcript_116278.known	chr5	+	1595	7	FSM	ENSG00000197451.12	ENST00000515193.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	711.790153220893	19824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCAAGCCTGGGTGAGT	12	False	NA	13	True	AATAAA	-9	NA	178204543	178211155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178204741_178204814_178205047_178205841_178206011_178206731_178206891_178207093_178207226_178209329_178209433_178210552
transcript_116281.known	chr5	-	562	4	FSM	ENSG00000175309.15	ENST00000511716.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	40.1026460750687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTAGTTTTGTGAG	26	True	NA	-9	True	AATAAA	-12	NA	178232541	178226465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178226699_178229939_178230100_178231404_178231524_178232491
transcript_116286.known	chr5	-	2504	13	FSM	ENSG00000113240.14	ENST00000316308.9	2504	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	21.8344465365064	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	4	True	NA	-5	True	CATAAA	-14	NA	178627050	178602663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178623255_178623417_178626945
transcript_116287.known	chr5	-	2780	15	FSM	ENSG00000113240.14	ENST00000521621.5	2780	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	34.9731675571372	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAAAGGAATATTCT	25	True	NA	-7	True	AGTAAA	-21	NA	178627029	178603269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178619837_178620674_178622392_178622460_178623255_178623417_178626945
transcript_116288.known	chr5	-	1955	13	FSM	ENSG00000113240.14	ENST00000522136.5	1955	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	33.3637361350447	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGTACTAGAAACCAA	-1	True	NA	95	True	NA	NA	NA	178627055	178603167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178605824_178605866_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_116290.known	chr5	-	2521	5	FSM	ENSG00000169131.13	ENST00000335815.7	2521	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	22.4388056723169	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTTTTGTTCTAGTA	10	True	NA	-10	True	ATTAAA	-16	NA	178730659	178711511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989_178729074_178730555
transcript_116293.known	chr5	+	2794	5	FSM	ENSG00000178338.11	ENST00000322434.8	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	10.4642247682282	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTCTTCTTTGTTGT	-13	True	NA	1	True	ATTAAA	-11	NA	178859952	178885020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178860128_178860996_178861081_178866243_178866371_178866975_178867072_178882708
transcript_116298.known	chr5	+	532	5	FSM	ENSG00000198939.8	ENST00000520805.5	532	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTAGGGGAAACCTGGG	3	True	NA	NA	False	NA	NA	NA	178895914	178931339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178895975_178912589_178912720_178912978_178913072_178916564_178916711_178931236
transcript_1163.known	chr1	-	328	2	FSM	ENSG00000116237.16	ENST00000495791.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAGGTACTGTCAGAA	1103	False	NA	NA	False	TTTAAA	-18	NA	6223502	6221897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6222161_6223437
transcript_116300.nnic	chr5	+	685	4	NNC	ENSG00000198939.8	novel	598	5	NA	NA	0	-29063	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1.63299316185545	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAAGTGTCCGTGTGTGC	-14	True	NA	NA	False	AATAAA	-21	NA	178895897	178902276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_178895975_178898578_178898676_178899790_178899858_178901832
transcript_116305.known	chr5	+	2383	5	FSM	ENSG00000178187.8	ENST00000519564.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.17944947177034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	178941197	178966433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178941445_178942684_178942825_178946358_178946486_178946896_178946987_178964654
transcript_116308.known	chr5	+	2332	5	FSM	ENSG00000178187.8	ENST00000320129.7	2332	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-21	True	NA	NA	False	NA	NA	NA	178941190	178966433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178941387_178942684_178942825_178946358_178946486_178946896_178946987_178964654
transcript_116309.nnic	chr5	+	635	5	NNC	ENSG00000234284.7	novel	3252	5	NA	NA	-53	-1143	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	12.0623380818148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCAGAGTGATCCTTTT	NA	False	NA	NA	False	NA	NA	NA	179023750	179031178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_179023905_179024969_179025038_179027472_179027600_179028031_179028128_179030988
transcript_116310.known	chr5	+	3252	5	FSM	ENSG00000234284.7	ENST00000444149.7	3252	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.11737237261468	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCCATGGTGGCGG	-1	True	NA	NA	False	AATACA	-16	NA	179023803	179035064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179023905_179024969_179025038_179027472_179027600_179028031_179028128_179032204
transcript_116317.known	chr5	-	535	2	FSM	ENSG00000253652.1	ENST00000520758.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTGGCAACTAATTGT	172	False	NA	NA	False	TATAAA	-15	NA	179515579	179503321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179503741_179515463
transcript_11632.nic	chr1	+	1383	6	NIC	ENSG00000081721.12	novel	1330	6	NA	NA	-90	-78	combination_of_known_junctions	FALSE	canonical	3	165	junction_1	80.4999378881748	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTGTCTGTGTTTCATA	NA	False	NA	43	True	ATTAAA	-15	NA	161749667	161757160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074_161753262_161756785
transcript_116321.known	chr5	+	2636	18	FSM	ENSG00000176783.15	ENST00000319449.9	2636	18	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_1	39.2638136051954	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	-3	True	NA	15	True	AATAAA	-16	NA	179550553	179610012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_116322.known	chr5	+	2454	18	FSM	ENSG00000176783.15	ENST00000393438.6	2454	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	62.3995386372794	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	9135	False	NA	15	True	AATAAA	-16	NA	179559691	179610012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179559836_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_116323.known	chr5	+	2642	17	FSM	ENSG00000176783.15	ENST00000437570.6	2642	17	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_5	37.402372919375	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	9135	False	NA	14	True	AATAAA	-15	NA	179559691	179610011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_116344.known	chr5	-	2279	14	FSM	ENSG00000169045.17	ENST00000393432.8	2279	14	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_13	94.2513949169294	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	882	False	NA	-3	True	AATAAA	-21	NA	179623710	179614177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_116345.known	chr5	-	2248	14	FSM	ENSG00000169045.17	ENST00000442819.6	2248	14	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_13	96.6853617234669	2074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	871	False	NA	-4	True	AATAAA	-20	NA	179623721	179614178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_116346.known	chr5	-	2105	12	FSM	ENSG00000169045.17	ENST00000510411.5	2105	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	130.243002381784	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	1423	False	NA	-6	True	AATAAA	-18	NA	179623169	179614180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179617020_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
transcript_116347.known	chr5	-	1996	12	FSM	ENSG00000169045.17	ENST00000510678.5	1996	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	173.758595720548	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	1423	False	NA	-6	True	AATAAA	-18	NA	179623169	179614180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179620891_179621036_179621241_179621398_179623036
transcript_116348.known	chr5	-	2114	12	FSM	ENSG00000169045.17	ENST00000329433.10	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	113.561357063844	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	1424	False	NA	-6	True	AATAAA	-18	NA	179623168	179614180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
transcript_116349.known	chr5	-	2444	13	FSM	ENSG00000169045.17	ENST00000514332.5	2444	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	97.8862718782477	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTTGTCTGTGCT	-2	True	NA	-5	True	AATAAA	-19	NA	179623671	179614179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621398_179623036_179623165_179623594
transcript_116350.known	chr5	-	620	5	FSM	ENSG00000169045.17	ENST00000510431.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	144.295486762407	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATGACAGACCTGGGGC	-1	True	NA	NA	False	NA	NA	NA	179623698	179618235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179618324_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_116351.known	chr5	-	805	5	FSM	ENSG00000169045.17	ENST00000513225.5	805	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	174.203006575662	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCTGAAAAGGCTCTAAAG	-8	True	NA	NA	False	NA	NA	NA	179624600	179619314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179624316
transcript_116352.known	chr5	-	594	5	FSM	ENSG00000169045.17	ENST00000504348.5	594	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	177.209621634944	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAGAAACACAAGGAAAG	-2	True	NA	NA	False	NA	NA	NA	179623671	179619300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179619408_179620891_179621036_179621241_179621398_179623036_179623188_179623635
transcript_116353.known	chr5	-	248	2	FSM	ENSG00000169045.17	ENST00000513230.1	248	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCGGGCCGGGCCGGGCC	-1	True	NA	NA	False	NA	NA	NA	179623670	179622951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179623165_179623635
transcript_116356.known	chr5	+	666	4	FSM	ENSG00000250999.2	ENST00000508188.2	666	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.02768199119819	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTGTTAGGTTTTTAT	NA	False	NA	NA	False	AATAGA	-18	NA	179657761	179664430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179658098_179658388_179658482_179662974_179663104_179664322
transcript_116359.known	chr5	+	5103	16	FSM	ENSG00000127022.16	ENST00000681072.1	5103	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1253.88786668594	3170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	-24	True	NA	-2	True	AATAAA	-4	NA	179698955	179731622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699103_179699574_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_116363.known	chr5	+	4822	15	FSM	ENSG00000127022.16	ENST00000681476.1	4822	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	972.922561782021	3158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	-36	True	NA	-2	True	AATAAA	-4	NA	179698943	179731622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699006_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_116365.known	chr5	+	4207	15	FSM	ENSG00000127022.16	ENST00000452673.6	4207	15	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	900.528767571858	3235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGACTGAATTTCTT	506	False	NA	33	True	ATTAAA	-18	NA	179698905	179730925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_116374.known	chr5	+	597	2	FSM	ENSG00000225051.5	ENST00000442010.2	597	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGATTCTAAGTCGAA	392	False	NA	NA	False	NA	NA	NA	179679031	179694649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179679285_179694305
transcript_116375.known	chr5	+	5103	14	FSM	ENSG00000127022.16	ENST00000680614.1	5103	14	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_13	280.020836080198	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTCCTGTTCAAATT	-57	True	NA	-4	True	CATAAA	-10	NA	179698922	179729954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679
transcript_116376.known	chr5	+	855	5	FSM	ENSG00000127022.16	ENST00000502498.6	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	3817	junction_1	123.465329141423	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCATTAATAGTTTT	-41	True	NA	NA	False	NA	NA	NA	179698938	179708622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238
transcript_116377.known	chr5	-	5155	21	FSM	ENSG00000197226.13	ENST00000355235.8	5155	21	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_11	23.0618190956394	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAGTTGTAAATGTGGTC	-32	True	NA	-31	True	AATAAA	-21	NA	179907897	179862070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179864129_179865253_179865361_179865837_179865889_179867777_179867850_179869768_179869835_179870254_179870496_179871461_179871531_179872891_179872991_179873118_179873249_179874901_179875188_179875919_179876038_179878308_179878524_179879046_179879198_179879627_179879790_179888102_179888313_179891378_179891587_179893208_179893468_179894385_179894615_179899188_179899308_179904701_179904813_179907703
transcript_116380.nic	chr5	+	2048	9	NIC	ENSG00000161011.20	novel	2253	7	NA	NA	25	0	combination_of_known_junctions	TRUE	canonical	1	58	junction_1	184.855179803001	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	30	False	NA	23	True	ATTAAA	-23	NA	179806432	179837255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_179806592_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_116383.nnic	chr5	+	1978	9	NNC	ENSG00000161011.20	novel	2253	7	NA	NA	-289	0	at_least_one_novel_splicesite	FALSE	canonical	1	165	junction_1	165.464828211315	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	14	True	NA	23	True	ATTAAA	-23	NA	179807034	179837255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_179807124_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_116385.known	chr5	-	2879	9	FSM	ENSG00000161010.16	ENST00000522663.5	2879	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	59.4280026586794	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCCTGTCTGGGATGTGAG	0	True	NA	NA	False	NA	NA	NA	179858860	179835132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853196_179853277_179853377_179853438_179858730
transcript_11639.known	chr1	+	740	5	FSM	ENSG00000081721.12	ENST00000464004.2	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	80.0468612751306	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACCGTGAAGGAAGTGG	-14	True	NA	NA	False	NA	NA	NA	161749779	161753105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161750146_161751654_161751782_161751865_161751985_161752367_161752465_161753074
transcript_116394.known	chr5	-	1244	8	FSM	ENSG00000161010.16	ENST00000518235.5	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	43.568852382857	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAAGAGGGGCACGCA	9	True	NA	NA	False	NA	NA	NA	179858806	179836633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837205_179837759_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_116397.nic	chr5	-	1351	8	ISM	ENSG00000161010.16	ENST00000522663.5	2879	9	-60	2143	-60	0	5prime_fragment	FALSE	canonical	2	12	junction_6	58.7651847506286	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	NA	False	NA	-13	True	AATAAA	-15	NA	179858920	179837275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853196_179853277_179853377_179853438_179858730
transcript_1164.known	chr1	-	2061	4	FSM	ENSG00000116251.11	ENST00000234875.9	2061	4	0	0	0	0	multi-exon	FALSE	canonical	3	3836	junction_3	966.168492321891	126778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTTTGTTTTTTTTAA	10	True	NA	-2	True	ATTAAA	-30	NA	6199595	6185019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199561
transcript_116403.known	chr5	-	1168	7	FSM	ENSG00000161010.16	ENST00000292586.11	1168	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	28.7851234726088	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-2	True	NA	-13	True	AATAAA	-15	NA	179858817	179837275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_116410.known	chr5	-	1096	6	FSM	ENSG00000161010.16	ENST00000523084.5	1096	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	59.4521656460049	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-19	True	NA	-13	True	AATAAA	-15	NA	179858834	179837275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
transcript_116411.known	chr5	-	868	6	FSM	ENSG00000161010.16	ENST00000521299.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	57.7408001330082	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGGGAAGACCTCATGGG	16	False	179858860	NA	False	NA	NA	NA	179858844	179837526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179847977_179848067_179853377_179853438_179858730
transcript_116413.known	chr5	-	1004	5	FSM	ENSG00000161010.16	ENST00000376931.6	1004	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	66.7883784800919	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	7	True	NA	-3	True	AATAAA	-25	NA	179858808	179837265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
transcript_116417.known	chr5	+	921	3	FSM	ENSG00000161011.20	ENST00000506042.5	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTTCTAACCAGGGG	-5	True	NA	111	True	AAAAAG	-17	NA	179806397	179813024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179806592_179811573_179811683_179812406
transcript_116424.known	chr5	-	848	3	FSM	ENSG00000161010.16	ENST00000519318.5	848	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	32	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATATTAAAAATACAAAAA	7	True	NA	NA	False	NA	NA	NA	179858808	179847356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179848067_179853377_179853438_179858730
transcript_116426.known	chr5	+	1454	2	FSM	ENSG00000245317.2	ENST00000499601.2	1454	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTATTCAAATCTA	NA	False	NA	NA	False	AATAAA	-17	NA	179859012	179861283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179859213_179860029
transcript_116428.known	chr5	+	808	4	FSM	ENSG00000161011.20	ENST00000466342.1	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_3	34.8807492274273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAAGTCACGCTGGGAA	875	False	NA	-11	True	NA	NA	NA	179823857	179833386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179824088_179824181_179824324_179825145_179825227_179833031
transcript_116429.known	chr5	-	4145	6	FSM	ENSG00000161010.16	ENST00000518219.5	4145	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	21.2790977252326	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	7	True	NA	-13	True	AATAAA	-15	NA	179858808	179837275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_116431.known	chr5	-	1904	9	FSM	ENSG00000113269.14	ENST00000521389.6	1904	9	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_1	57.0920309675527	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGAGTGTCAAAATGAT	-16	True	NA	NA	False	AATAAA	-16	NA	180071759	179955066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179955670_179963470_179963565_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_116433.known	chr5	-	1766	8	FSM	ENSG00000113269.14	ENST00000261947.4	1766	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	282.816880251342	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTTTTGAGGGCTG	-6	True	NA	-1	True	AATAAA	-42	NA	180072101	179955452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179955670_179966805_179967011_179970409_179970507_179978202_179978286_179980128_179980201_180013060_180013312_180040452_180040648_180071455
transcript_116435.known	chr5	-	697	2	FSM	ENSG00000113269.14	ENST00000523487.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGCTACTGGTCTTAT	NA	False	NA	-4	True	AATAAA	-22	NA	179978287	179976773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179977386_179978202
transcript_116439.nnic	chr5	+	337	2	FSM	ENSG00000248367.2	ENST00000691211.1	342	2	5	0	-2	0	multi-exon	FALSE	canonical	3	15	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTATTC	NA	False	NA	NA	False	AATAAA	-18	NA	180292182	180295253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180292301_180295034
transcript_11644.known	chr1	+	3032	16	FSM	ENSG00000118217.7	ENST00000681557.1	3032	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.1584195184484	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	161766341	161959658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161766443_161778243_161778317_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_116440.known	chr5	+	393	2	FSM	ENSG00000248367.2	ENST00000504573.2	465	2	69	3	69	0	multi-exon	FALSE	canonical	3	9	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTATTC	44	False	NA	NA	False	AATAAA	-18	NA	180293244	180295253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180293419_180295034
transcript_116442.known	chr5	-	3034	19	FSM	ENSG00000131459.13	ENST00000253778.13	3034	19	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_9	110.06053328807	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-9	True	NA	-29	True	AATAAA	-15	NA	180353336	180300697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180301609_180302422_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_116451.nic	chr5	-	966	7	ISM	ENSG00000131459.13	ENST00000253778.13	3034	19	-49	27377	-49	3337	5prime_fragment	FALSE	canonical	3	609	junction_1	37.7668284786178	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAACCAGAAAGTTGGA	NA	False	NA	NA	False	ATTAAA	-10	NA	180353385	180328074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_116454.nnic	chr5	-	650	5	NNC	ENSG00000131459.13	novel	3034	19	NA	NA	-49	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	304.222369328753	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	NA	False	NA	-29	True	AATAAA	-15	NA	180353385	180300697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_180300909_180335896_180335954_180336478_180336578_180338492_180338601_180353210
transcript_116461.known	chr5	-	478	3	FSM	ENSG00000161055.4	ENST00000292641.4	478	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGAGCCTGGTATTTTCT	-2	True	NA	NA	False	AATAAA	-15	NA	180591499	180590104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180590255_180590599_180590839_180591410
transcript_116476.known	chr5	-	534	2	FSM	ENSG00000131446.17	ENST00000505682.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCCAATAACGTCTTTT	7737	False	NA	NA	False	NA	NA	NA	180802767	180795429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180795876_180802679
transcript_116482.known	chr5	+	1708	2	FSM	ENSG00000245060.8	ENST00000653411.1	1708	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	453	False	NA	31	True	AATAAA	-38	NA	180830936	180835726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831230_180834311
transcript_116483.known	chr5	+	1817	2	FSM	ENSG00000245060.8	ENST00000659553.1	1817	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCCGATCATTTATGTG	396	False	NA	42	True	AATAAA	-33	NA	180831415	180835737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831807_180834311
transcript_116484.known	chr5	+	1713	2	FSM	ENSG00000245060.8	ENST00000657229.1	1713	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	-32	True	NA	31	True	AATAAA	-38	NA	180831643	180835726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831942_180834311
transcript_116485.known	chr5	+	1267	3	FSM	ENSG00000245060.8	ENST00000661298.1	1267	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	-5	True	NA	31	True	AATAAA	-38	NA	180831670	180835726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831942_180834311_180835003_180835421
transcript_116486.known	chr5	+	1160	3	FSM	ENSG00000245060.8	ENST00000662722.1	1160	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGTCAACTGAGCCGAT	-32	True	NA	32	True	AATAAA	-39	NA	180831643	180835727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831807_180834311_180835003_180835421
transcript_11649.nic	chr1	+	669	6	ISM	ENSG00000118217.7	ENST00000680462.1	2974	15	-118	73805	-95	-138	5prime_fragment	FALSE	canonical	3	65	junction_5	10.5451410611713	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGTGAATTCAAAACCT	2	True	NA	NA	False	AAGAAA	-5	NA	161766202	161792150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123
transcript_1165.known	chr1	-	2279	3	FSM	ENSG00000116251.11	ENST00000480661.1	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	5877	junction_1	8.5	111449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTGGAAATCATAGTC	9830	False	NA	NA	False	NA	NA	NA	6199563	6186574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651
transcript_116501.known	chr5	-	725	4	FSM	ENSG00000196670.14	ENST00000506377.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.98146239020499	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-16	True	NA	-3	True	AATAAA	-20	NA	180861285	180847610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180848083_180851380_180851494_180851987_180852061_180861218
transcript_116503.nnic	chr5	-	780	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	29.1318840219212	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-17	True	NA	-3	True	AATAAA	-20	NA	180861286	180847610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_180848083_180851380_180851494_180860527_180860655_180861218
transcript_116504.nnic	chr5	-	805	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	33.0790299468141	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-17	True	NA	-3	True	AATAAA	-20	NA	180861286	180847610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_180848083_180851380_180851494_180860527_180860680_180861218
transcript_11651.known	chr1	+	8524	8	FSM	ENSG00000152332.16	ENST00000489294.2	8524	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	6.65168384389875	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCTATACTTAGTATA	-20	True	NA	35	True	AATAAA	-36	NA	162497817	162529631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_162498269_162499954_162500248_162500912_162501105_162503753_162503849_162512499_162512577_162512724_162512824_162518101_162518191_162522403
transcript_116510.nic	chr5	-	690	3	NIC	ENSG00000196670.14	novel	725	4	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	10	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	53	False	NA	-3	True	AATAAA	-20	NA	180861323	180847610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_180848083_180851380_180851494_180861218
transcript_116512.known	chr5	-	3941	2	FSM	ENSG00000196670.14	ENST00000502412.2	3941	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-7	True	NA	-3	True	AATAAA	-20	NA	180861276	180847610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180851494_180861218
transcript_116514.nnic	chr5	+	2022	8	NNC	ENSG00000113303.12	novel	700	5	NA	NA	-1492	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.12485826771597	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTGCTTGTTTATTTC	8916	False	NA	NA	False	NA	NA	NA	180908071	180950906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_180908278_180908585_180908934_180911338_180911615_180947511_180947626_180948354_180948376_180948919_180948947_180949238_180949266_180949903
transcript_116515.known	chr5	+	339	1	FSM	ENSG00000231228.4	ENST00000511402.1	339	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAGAGCTGAACTGCAT	NA	False	NA	NA	False	NA	NA	NA	180982272	180982611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180982300_180982600
transcript_116517.known	chr5	+	392	3	FSM	ENSG00000250222.3	ENST00000508877.1	392	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGCAGCGTTTGTACT	148	False	NA	27	True	AATAAA	-24	NA	181192069	181194428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181192141_181193341_181193468_181194233
transcript_116518.known	chr5	+	289	2	FSM	ENSG00000250222.3	ENST00000514487.1	289	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAGCGTTTGTACTT	2	True	NA	28	True	AATAAA	-25	NA	181191923	181194429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181192017_181194233
transcript_116519.nnic	chr5	+	279	2	NIC	ENSG00000250222.3	novel	392	3	NA	NA	-17	-4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATCCAAGCAGCGTTTG	131	False	NA	23	True	AATAAA	-20	NA	181192052	181194424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_181192141_181194233
transcript_116520.nnic	chr5	+	336	2	NNC	ENSG00000250222.3	novel	392	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAGCGTTTGTACTT	131	False	NA	28	True	AATAAA	-25	NA	181192052	181194429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_181192193_181194233
transcript_116521.known	chr5	+	2696	8	FSM	ENSG00000146063.20	ENST00000351937.9	2696	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	4.22335585688414	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	-6	True	NA	18	True	AATAAA	-19	NA	181223289	181235808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234350_181234931_181234996_181235353
transcript_116524.nic	chr5	+	1077	2	ISM	ENSG00000146063.20	ENST00000503114.1	1904	7	10315	0	667	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGAGGTCTGTTCCTTCA	2990	False	NA	17	True	AATAAA	-18	NA	181234372	181235807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_181234996_181235353
transcript_116525.nnic	chr5	-	551	2	Antisense	novelGene_ENSG00000146063.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGGGGCCATGATTTATG	NA	False	NA	5	True	AATAAA	-26	NA	181223662	181222863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_181223233_181223480
transcript_116534.known	chr5	-	1140	8	FSM	ENSG00000204628.12	ENST00000512805.6	1140	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3596.42693431655	7926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTCTATCTACATTG	0	True	NA	12	True	NA	NA	NA	181243906	181236896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
transcript_116560.known	chr5	-	965	8	FSM	ENSG00000204628.12	ENST00000376817.8	965	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4559.4531895563	5263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	3	True	NA	23	True	AATAAA	-13	NA	181243903	181236936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242214_181243691
transcript_116584.known	chr5	+	1000	4	FSM	ENSG00000233937.8	ENST00000511331.5	1000	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.78888096369861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTCATAAAGTCCAGAATT	1	True	NA	NA	False	NA	NA	NA	181246522	181272167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181246883_181247115_181247387_181271572_181271690_181271915
transcript_116589.known	chr5	+	1046	3	FSM	ENSG00000233937.8	ENST00000506340.3	1061	3	14	1	0	-1	multi-exon	FALSE	canonical	3	19	junction_1	16	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTTGTACTGTTAACT	-15	True	NA	7	True	AATAAA	-16	NA	181246506	181257585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181246883_181247115_181247387_181257186
transcript_116596.known	chr5	+	529	3	FSM	ENSG00000248275.3	ENST00000509252.2	864	3	11	324	2	-4	multi-exon	FALSE	canonical	3	6	junction_2	80.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTGGCTGGGTGCGG	26	True	NA	NA	False	NA	NA	NA	181261223	181264257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181261385_181263627_181263790_181264051
transcript_116598.known	chr5	+	672	3	FSM	ENSG00000248275.3	ENST00000507434.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGTCAGTAAATGT	24	True	NA	NA	False	AATAAA	-19	NA	181261221	181272307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181261385_181271572_181271690_181271915
transcript_116602.known	chr5	+	886	2	FSM	ENSG00000233937.8	ENST00000505151.6	1280	2	394	0	378	0	multi-exon	FALSE	canonical	3	51	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTTGTACTGTTAACTA	379	False	NA	8	True	AATAAA	-17	NA	181246900	181257586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181247387_181257186
transcript_116605.known	chr5	+	807	2	FSM	ENSG00000248275.3	ENST00000514146.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGCTGGGTGCGGTGGC	14	True	NA	NA	False	AAAAAG	-3	NA	181261211	181264261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181261385_181263627
transcript_116608.known	chr5	-	581	2	FSM	ENSG00000204628.12	ENST00000514318.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTCATTACTACATTT	-2	True	NA	NA	False	AGTAAA	-36	NA	181243908	181243041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181243406_181243691
transcript_116610.known	chr5	-	633	2	FSM	ENSG00000183718.6	ENST00000688015.1	2856	2	886	1337	-63	-97	multi-exon	FALSE	canonical	3	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAATGACATGAAC	1724	False	NA	NA	False	AAAACA	-20	NA	181260257	181256483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181256860_181260000
transcript_116611.known	chr5	-	3466	2	FSM	ENSG00000183718.6	ENST00000611618.1	3466	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGCTTTCATTAATTTC	14	True	NA	-1	True	AATAAA	-20	NA	181261118	181255146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181257495_181260000
transcript_116612.known	chr5	-	370	2	FSM	ENSG00000183718.6	ENST00000510796.2	2801	2	822	1609	-130	-622	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCATTCATCACTCTGC	1657	False	NA	NA	False	NA	NA	NA	181260324	181257008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181257055_181260000
transcript_116614.known	chr5	-	1098	8	FSM	ENSG00000204628.12	ENST00000504325.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	3590.95048528312	49244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	306	False	NA	-17	True	AATAAA	-24	NA	181243889	181236925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242169_181242346_181243691
transcript_116615.known	chr5	-	1651	7	FSM	ENSG00000204628.12	ENST00000513060.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	8280	junction_1	807.155223953581	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTACAAATAAAAAAAAAAC	248	False	NA	-1	True	NA	NA	NA	181243947	181236960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181242346_181243691
transcript_116616.known	chr5	-	825	6	FSM	ENSG00000204628.12	ENST00000511566.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5052.18647320148	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTTAGGTTTTTTT	315	False	NA	-25	True	AATAAA	-16	NA	181243880	181236933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
transcript_116617.known	chr5	-	889	8	FSM	ENSG00000204628.12	ENST00000507756.5	889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5124.89088385583	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGTTTTTTTTTCTT	-1	True	NA	-20	True	AATAAA	-21	NA	181242246	181236928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237224_181237320_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173
transcript_116618.known	chr5	-	1208	9	FSM	ENSG00000204628.12	ENST00000508682.5	1208	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4810.38724402724	5235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	4	True	NA	23	True	AATAAA	-13	NA	181243902	181236936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240328_181241491_181241640_181242173_181242346_181243691
transcript_116619.known	chr5	-	888	2	FSM	ENSG00000204628.12	ENST00000509148.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	10650	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGTTTTTTTTTCTT	6000	False	NA	-20	True	AATAAA	-21	NA	181238195	181236928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237720_181238098
transcript_116620.known	chr5	-	388	3	FSM	ENSG00000204628.12	ENST00000504726.1	388	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4140	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTTTCTGACTTTTAGG	15	True	NA	19	True	AATAAA	-9	NA	181243891	181236940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237695_181243691
transcript_116621.known	chr5	-	922	7	FSM	ENSG00000204628.12	ENST00000511900.5	922	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3812.61797267384	2578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGCTTTTCTGACTTT	315	False	NA	15	True	AATAAA	-5	NA	181243880	181236944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181242169_181242346_181243691
transcript_116622.known	chr5	-	643	6	FSM	ENSG00000204628.12	ENST00000502905.5	643	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4740.85214281146	8124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGTTTTTTTTTCTT	-3	True	NA	-20	True	AATAAA	-21	NA	181242206	181236928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239486_181239583_181241491_181241640_181242173
transcript_116623.known	chr5	-	456	4	FSM	ENSG00000204628.12	ENST00000509535.5	456	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	4849.50425874187	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-7	True	NA	23	True	AATAAA	-13	NA	181239584	181236936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181238098_181238240_181239066_181239178_181239486
transcript_116625.known	chr6	+	1485	8	FSM	ENSG00000112679.15	ENST00000344450.9	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	56.1753813461712	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	9	True	NA	16	True	AATAAA	-22	NA	292096	351355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768_348842_350821
transcript_116626.known	chr6	+	587	7	FSM	ENSG00000112679.15	ENST00000603726.5	587	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	52.562396782829	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGTAGTGATTTGTAA	42	False	NA	NA	False	AAAAAG	-22	NA	292539	350950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768_348842_350821
transcript_116629.known	chr6	-	3484	3	FSM	ENSG00000287265.1	ENST00000665870.1	3484	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATGTACAATTTAAAAT	1536	False	NA	NA	False	NA	NA	NA	292013	285442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_287824_288400_288658_291167
transcript_116631.known	chr6	-	4456	28	FSM	ENSG00000112685.14	ENST00000230449.9	4456	28	0	0	0	0	multi-exon	TRUE	canonical	2	371	junction_17	59.4526474090988	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-27	True	NA	-22	True	AATAAA	-15	NA	693139	485153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_116640.nnic	chr6	-	2274	12	NNC	ENSG00000112685.14	novel	720	6	NA	NA	-28	48035	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	158.505520408596	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGTTAAAAACAGTTGT	0	True	NA	NA	False	AATAAA	-19	NA	693167	581799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_582690_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_116644.known	chr6	-	536	3	FSM	ENSG00000112685.14	ENST00000475028.2	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATTTCTTTATGGCT	4	True	NA	NA	False	NA	NA	NA	693108	679142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_679515_689138_689213_693018
transcript_116646.nnic	chr6	-	426	2	NIC	ENSG00000112685.14	novel	536	3	NA	NA	-6	-73	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGAATATATTTGCAG	22	False	693167	NA	False	AATAAA	-17	NA	693145	679215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_679515_693018
transcript_116661.known	chr6	+	568	4	FSM	ENSG00000250903.10	ENST00000533653.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	7.84573486395988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATCTGTTTCTTTTT	48	False	NA	NA	False	ATTAAA	-14	NA	2245852	2270013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_2245931_2248836_2248927_2263600_2263685_2269697
transcript_116662.known	chr6	+	539	4	FSM	ENSG00000250903.10	ENST00000525811.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.39266853573691	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTTTTGGTAATCACT	36	False	NA	NA	False	AATAAA	-19	NA	2245840	2283773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_2245931_2248836_2248927_2263600_2263685_2283498
transcript_116664.nnic	chr6	+	711	4	NIC	ENSG00000250903.10	novel	1640	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.39266853573691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTTGTCAACACTAA	-10	True	NA	NA	False	AATAAA	-33	NA	2245757	2352702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_2245931_2248836_2248927_2263600_2263685_2352338
transcript_116670.known	chr6	-	2450	3	FSM	ENSG00000164385.10	ENST00000624527.3	2450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGAGTTTTTGGTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	2634619	2621912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2624120_2633604_2633793_2634564
transcript_11668.known	chr1	+	1528	9	FSM	ENSG00000132196.16	ENST00000254521.8	1528	9	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_7	15.8464309861874	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCCTTCCTTTTGGAA	NA	False	NA	1	True	AATAAA	-19	NA	162790701	162812823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_162790836_162792658_162792863_162796584_162796678_162797801_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_116680.known	chr6	-	2476	7	FSM	ENSG00000021355.13	ENST00000380739.6	2476	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_5	9.91071249821234	652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCTCAGGCCTCTTC	-1	True	NA	-1	True	AATAAA	-24	NA	2841863	2832331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2834013_2835855_2836024_2836107_2836251_2837881_2838000_2838548_2838687_2840418_2840595_2841811
transcript_116685.known	chr6	-	1786	2	FSM	ENSG00000230438.8	ENST00000670540.2	1804	2	0	18	0	-18	multi-exon	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTCAAAGTTCCCTAATG	9873	False	NA	NA	False	NA	NA	NA	2876607	2854219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2855691_2876292
transcript_116687.known	chr6	-	4143	7	FSM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_3	151.891865775916	799	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTAGATTTTCCCTT	0	True	NA	-7	True	AATAAA	-24	NA	2903309	2887269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2890571_2891832_2891989_2893410_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
transcript_116696.known	chr6	-	2036	8	FSM	ENSG00000124570.21	ENST00000616722.4	2036	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	201.956451155355	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGCATTCACTCCGTGT	79	False	NA	-22	True	AATAAA	-16	NA	2972165	2948170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2968778_2968914_2971532
transcript_116701.known	chr6	-	1375	7	FSM	ENSG00000124570.21	ENST00000380546.7	1375	7	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_6	154.266454191729	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	659	False	NA	-10	True	AATAAA	-28	NA	2971585	2948158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971490
transcript_116702.known	chr6	-	1315	7	FSM	ENSG00000124570.21	ENST00000380539.7	1315	7	0	0	0	0	multi-exon	FALSE	canonical	2	114	junction_6	133.667497919277	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	1	True	NA	-10	True	AATAAA	-28	NA	2971567	2948158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971532
transcript_116703.known	chr6	-	1313	7	FSM	ENSG00000124570.21	ENST00000380520.6	1313	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	173.775717521177	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATAAAGGGCCCATTT	-4	True	NA	-47	True	NA	NA	NA	2971661	2948195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971591
transcript_116716.known	chr6	-	1370	7	FSM	ENSG00000124570.21	ENST00000380529.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	2	133	junction_6	127.133023072511	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	1038	False	NA	-10	True	AATAAA	-28	NA	2971206	2948158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971116
transcript_116717.known	chr6	-	1495	7	FSM	ENSG00000124570.21	ENST00000380524.5	1495	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	165.58826112446	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	19	True	NA	-10	True	AATAAA	-28	NA	2962108	2948158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2961893
transcript_116718.known	chr6	-	3489	9	FSM	ENSG00000124570.21	ENST00000649845.1	3489	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	219.657652666598	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTCCGTGTGTTTGTGTG	1499	False	NA	-13	True	AATAAA	-25	NA	2970745	2948161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2960260_2960379_2960969_2961097_2968778
transcript_11672.nic	chr1	+	1528	9	NIC	ENSG00000132196.16	novel	2541	9	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_3	65.8567337103808	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTCTTTTCCTTCCTT	NA	False	NA	-5	True	AATAAA	-13	NA	162790669	162812817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_162790836_162792658_162792863_162796584_162796678_162797827_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_116755.known	chr6	+	1573	3	FSM	ENSG00000244041.7	ENST00000605901.1	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	4	True	NA	23	True	AATAAA	-23	NA	2988647	2991173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_2988710_2989527_2989734_2989868
transcript_116762.known	chr6	-	417	2	FSM	ENSG00000224846.3	ENST00000456189.2	417	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTCTCACAAGCTAAGT	427	False	NA	-11	True	ATTAAA	-23	NA	2998743	2989721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2990012_2998616
transcript_116763.known	chr6	-	408	2	FSM	ENSG00000224846.3	ENST00000429319.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGCTCTCACAAGCT	36	False	NA	-15	True	ATTAAA	-19	NA	2999134	2989725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2990012_2999012
transcript_116766.known	chr6	+	1073	7	FSM	ENSG00000124588.22	ENST00000380455.11	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	106.564534438058	2133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	0	True	NA	15	True	AATAAA	-16	NA	2999893	3019755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_116767.known	chr6	+	851	6	FSM	ENSG00000124588.22	ENST00000380454.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_4	352.902026063892	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	12	False	NA	15	True	AATAAA	-16	NA	3000001	3019755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_116768.known	chr6	+	1508	10	FSM	ENSG00000124588.22	ENST00000338130.7	1508	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	530.276401255416	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	3	True	NA	15	True	AATAAA	-16	NA	2999973	3019755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3000086_3002049_3002287_3003668_3003790_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_116769.known	chr6	-	504	3	FSM	ENSG00000224846.3	ENST00000665347.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAGCTCTCACAAGCT	-7	True	NA	-15	True	ATTAAA	-19	NA	2999177	2989725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2990012_2998616_2998670_2999012
transcript_116771.nnic	chr6	+	630	2	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTTCTATTCACAAAAAG	502	False	NA	NA	False	AATAAA	-23	NA	3069026	3070046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr6_+_3069174_3069563
transcript_116774.known	chr6	+	1186	8	FSM	ENSG00000137274.13	ENST00000434640.5	1186	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	112.767414601552	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCACACTCCAGTCTTG	NA	False	NA	-75	True	NA	NA	NA	3118373	3152575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3118563_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_116783.known	chr6	+	1563	8	FSM	ENSG00000137274.13	ENST00000424847.6	1563	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	108.866516281853	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTACCCCTCCCTTCA	NA	False	NA	19	True	NA	NA	NA	3118375	3152669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3118848_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_116791.known	chr6	+	1909	7	FSM	ENSG00000137274.13	ENST00000380379.10	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	26.4428104070317	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGCAAGTTAAACCTTG	-8	True	NA	NA	False	AATAAA	-3	NA	3118710	3153578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_116794.nic	chr6	+	1328	7	NIC	ENSG00000137274.13	novel	1909	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	93.8558291565669	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAACATAA	NA	False	NA	-32	True	NA	NA	NA	3118691	3153028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152537
transcript_116803.known	chr6	-	1616	4	FSM	ENSG00000137267.7	ENST00000333628.4	1616	4	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_2	26.5371856499935	1466	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTCTGTGTTCTCA	-1	True	NA	-5	True	AATAAA	-18	NA	3157544	3153665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3154924_3155624_3155736_3156043_3156153_3157406
transcript_116806.known	chr6	+	576	2	FSM	ENSG00000137274.13	ENST00000423798.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAACATAA	NA	False	NA	-32	True	NA	NA	NA	3140424	3153028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3140510_3152537
transcript_116807.known	chr6	+	3723	7	FSM	ENSG00000137274.13	ENST00000490918.5	3723	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	97.1363589096391	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAAGCCTCTAACTTC	7	True	NA	2	True	AATAAA	-22	NA	3118725	3153062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3138040_3140510_3152487
transcript_116808.known	chr6	+	691	2	FSM	ENSG00000137274.13	ENST00000464040.1	691	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAAAGGAA	NA	False	NA	-14	True	AATAAA	-6	NA	3150013	3153046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3150146_3152487
transcript_116809.known	chr6	-	1620	3	FSM	ENSG00000230269.7	ENST00000425384.7	1620	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTGTCCTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	3195784	3182629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3183727_3190826_3191231_3195665
transcript_116810.known	chr6	-	1651	3	FSM	ENSG00000230269.7	ENST00000435043.3	1651	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTTTTTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	3195784	3182625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3183727_3190826_3191258_3195665
transcript_116811.known	chr6	-	1220	2	FSM	ENSG00000230269.7	ENST00000656983.1	1220	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTTTTTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	3195784	3182625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3183727_3195665
transcript_116814.nnic	chr6	+	776	2	Antisense	novelGene_ENSG00000137266.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTGGACTCTCT	NA	False	NA	12	True	AATAAA	-22	NA	3455944	3469354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_3456252_3468885
transcript_116822.known	chr6	+	489	2	FSM	ENSG00000180822.12	ENST00000380305.4	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTCATCAGGCCGCG	-2	True	NA	13	True	AATAAA	-13	NA	3258896	3267779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3267590
transcript_116824.known	chr6	+	2323	2	FSM	ENSG00000180822.12	ENST00000454610.2	2323	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTGACTGTAGTCTG	97	False	NA	NA	False	AATAAA	-22	NA	3259059	3291984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3289798
transcript_116825.known	chr6	-	1922	4	FSM	ENSG00000137285.11	ENST00000259818.8	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	2236	junction_3	65.5591336123351	7478	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTACTTGAAAGCACAGT	-2	True	NA	-18	True	AATAAA	-16	NA	3227653	3224276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3227486
transcript_116826.known	chr6	+	785	3	FSM	ENSG00000180822.12	ENST00000438998.7	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	44.5	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	-16	True	NA	NA	False	ATTAAA	-17	NA	3258946	3268049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3263683_3263760_3267590
transcript_116827.known	chr6	+	629	4	FSM	ENSG00000180822.12	ENST00000419065.6	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	276.058367419324	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	-11	True	NA	15	True	AATAAA	-15	NA	3258951	3267781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3263683_3263760_3264208_3264326_3267590
transcript_116828.known	chr6	+	1643	2	FSM	ENSG00000145945.7	ENST00000648326.1	1643	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	-1	True	NA	8	True	AATAAA	-18	NA	3849372	3851317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3849487_3849788
transcript_116830.known	chr6	+	1935	1	FSM	ENSG00000145945.7	ENST00000380274.2	1935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGGTTAATTTATTT	12	True	NA	11	True	AATAAA	-21	NA	3849385	3851320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3849400_3851300
transcript_116836.known	chr6	+	7517	15	FSM	ENSG00000112739.17	ENST00000337659.11	7517	15	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	28.8008644994967	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	-7	True	NA	15	True	AATAAA	-19	NA	4021299	4064983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412
transcript_116838.known	chr6	-	1451	11	FSM	ENSG00000198721.13	ENST00000496241.6	1451	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	287.997934020368	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCACACAGGTGTTTGG	5	True	NA	-12	True	AATAAA	-23	NA	4135591	4115699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130178_4130250_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_116846.known	chr6	-	1405	10	FSM	ENSG00000198721.13	ENST00000380125.6	1405	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	226.886168228328	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTTTGGTAGTAGA	158	False	NA	-5	True	AATAAA	-30	NA	4135468	4115692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135369
transcript_116848.known	chr6	-	1380	10	FSM	ENSG00000198721.13	ENST00000361538.6	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_9	131.889216511809	2002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-1	True	NA	-18	True	AATAAA	-17	NA	4135597	4115705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_116870.known	chr6	-	558	4	FSM	ENSG00000198721.13	ENST00000489086.1	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	210.02275009045	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCACACAAAAGCTGTAGAG	-9	True	NA	NA	False	NA	NA	NA	4135573	4130317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4130561_4130766_4130866_4133548_4133702_4135510
transcript_116875.nic	chr6	+	1091	2	ISM	ENSG00000112739.17	ENST00000480058.5	6775	16	-116	32649	-116	-11893	5prime_fragment	FALSE	canonical	3	359	junction_1	0	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGGAAAAAATCCCCAAT	NA	False	NA	29	True	AGTAAA	-7	NA	4021150	4032333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_4021467_4031558
transcript_116876.known	chr6	-	1368	10	FSM	ENSG00000198721.13	ENST00000380118.8	1368	10	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_9	109.592285932006	2197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-11	True	NA	-18	True	AATAAA	-17	NA	4135575	4115705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_116877.known	chr6	-	1133	8	FSM	ENSG00000198721.13	ENST00000478266.6	1133	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	261.49835134299	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	0	True	NA	-18	True	AATAAA	-17	NA	4135564	4115705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_116878.known	chr6	-	2122	9	FSM	ENSG00000198721.13	ENST00000464057.5	2122	9	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_8	136.707717412003	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-11	True	NA	-18	True	AATAAA	-17	NA	4135575	4115705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_116881.nic	chr6	+	2050	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-30	-116	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	19.1985242488409	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTCCAAACGTCATTAT	NA	False	NA	27	True	AATAAA	-15	NA	4772940	4954257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_116882.nic	chr6	+	3316	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	19.1985242488409	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	NA	False	NA	18	True	AATAAA	-20	NA	4772961	4955544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_116885.nic	chr6	+	1603	5	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	250	junction_1	14.0423466699836	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGTTTGGTTATTGTTT	NA	False	NA	NA	False	AAAAAG	-26	NA	4772940	4943813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545
transcript_116891.known	chr6	+	773	2	FSM	ENSG00000153046.18	ENST00000483019.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCACAGGCTTAGCTG	11	False	NA	-32	True	NA	NA	NA	4773040	4892347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_4773179_4891712
transcript_116896.known	chr6	-	1042	8	FSM	ENSG00000124787.14	ENST00000464646.1	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	78.171449456973	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATTAAAAATCG	372	False	NA	-37	True	NA	NA	NA	5003658	4995077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003585
transcript_116906.known	chr6	+	1732	3	FSM	ENSG00000272142.4	ENST00000671039.1	1732	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCCTCTCGCTCTGCCT	NA	False	NA	NA	False	AAAAAG	-14	NA	5003777	5043962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5003960_5021380_5021474_5042505
transcript_116909.known	chr6	+	1278	3	FSM	ENSG00000272142.4	ENST00000663198.1	1278	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGCATACACCAAACAT	NA	False	NA	NA	False	TATAAA	-23	NA	5003777	5043590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5003960_5021380_5021474_5042587
transcript_11691.known	chr1	+	507	2	FSM	ENSG00000132196.16	ENST00000367915.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGAGTCTTGCTCTGTT	NA	False	NA	NA	False	TTTAAA	-2	NA	162790722	162793052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_162790836_162792658
transcript_116912.known	chr6	-	1488	8	FSM	ENSG00000124787.14	ENST00000380051.7	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	36.4876272012241	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCAGTCCCTGTTGT	-7	True	NA	NA	False	AATAAA	-18	NA	5004037	4994716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_116913.known	chr6	-	1056	7	FSM	ENSG00000124787.14	ENST00000618533.4	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	79.2520592091391	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACGCTTGCTTTCAG	NA	False	NA	-8	True	AATAAA	-22	NA	5004063	4995048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_116914.known	chr6	-	1088	7	FSM	ENSG00000124787.14	ENST00000319533.9	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	78.1039193781095	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	-6	True	NA	-6	True	AATAAA	-24	NA	5004036	4995046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5002100_5002246_5003879
transcript_116915.known	chr6	-	632	5	FSM	ENSG00000124787.14	ENST00000468105.5	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	35.6265350546471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATTTTGAAAGTAATTG	-17	True	NA	NA	False	AATAAA	-15	NA	5004047	4998687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_11692.known	chr1	+	2984	5	FSM	ENSG00000117152.14	ENST00000367909.11	2984	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.08972473588517	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCTTGGAAACACATTAA	-1	True	NA	NA	False	AATAAA	-18	NA	163069360	163076802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163069529_163072394_163072500_163072804_163072867_163073455_163073623_163074320
transcript_116921.known	chr6	-	1168	2	FSM	ENSG00000214113.11	ENST00000468929.5	1168	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-3	True	NA	-13	True	AATAAA	-22	NA	5260742	5108418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5109492_5260647
transcript_116923.known	chr6	-	1497	3	FSM	ENSG00000214113.11	ENST00000330636.9	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	33.5	1957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-10	True	NA	-13	True	AATAAA	-22	NA	5260950	5108418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5109492_5216617_5216739_5260647
transcript_116924.known	chr6	-	592	3	FSM	ENSG00000214113.11	ENST00000500576.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	345	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTGCTTTTGTAGAT	2	True	NA	-1	True	AATAAA	-17	NA	5260737	5186599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5186981_5216617_5216739_5260647
transcript_116928.known	chr6	+	1692	7	FSM	ENSG00000145982.13	ENST00000324331.10	1692	7	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	37.6979958205856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACCACTTCACTCAGGC	29	False	NA	NA	False	NA	NA	NA	5261043	5771429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5261359_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_116929.known	chr6	+	1679	7	FSM	ENSG00000145982.13	ENST00000274680.9	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	13.8764388643324	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	-17	True	NA	19	True	AATAAA	-20	NA	5261512	5771583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5261661_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_116933.nnic	chr6	+	1090	6	NIC	ENSG00000145982.13	novel	1679	7	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	44.2583325487981	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	4	False	NA	19	True	AATAAA	-20	NA	5261468	5771583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_5261661_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_116937.nnic	chr6	+	895	5	NIC	ENSG00000145982.13	novel	1679	7	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	48.32895095075	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	-26	True	NA	19	True	AATAAA	-20	NA	5261503	5771583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_5261661_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_116938.known	chr6	-	354	1	FSM	ENSG00000217239.3	ENST00000407959.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAACTTTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	5788699	5788345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5788300_5788700
transcript_116941.known	chr6	-	1795	4	FSM	ENSG00000124785.9	ENST00000622188.4	1795	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGGGTGTCGTTTGTT	29	True	NA	-2	True	AATAAA	-13	NA	6004044	5998001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5999205_6002352_6002498_6003168_6003274_6003702
transcript_116943.known	chr6	-	1582	3	FSM	ENSG00000124785.9	ENST00000244766.7	1582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTGTCGTTTGTTTCC	-12	True	NA	1	True	AATAAA	-16	NA	6006925	5997998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5999205_6002352_6002498_6006694
transcript_116947.known	chr6	-	3828	15	FSM	ENSG00000124491.16	ENST00000264870.8	3828	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.3956755211442	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATCTGTGCAGAAGTG	-1	True	NA	NA	False	AATAAA	-16	NA	6320662	6144083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_6145773_6151812_6151950_6167457_6167619_6174579_6174868_6181987_6182142_6195796_6195886_6197222_6197327_6222032_6222172_6224685_6224861_6248311_6248420_6250810_6250930_6266557_6266810_6305350_6305540_6318534_6318683_6320586
transcript_116948.known	chr6	+	4461	2	FSM	ENSG00000288046.1	ENST00000655459.1	4461	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAACTGTGAACTTTGG	66	False	NA	NA	False	AGTAAA	-6	NA	6725035	6733191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_6725301_6728995
transcript_116952.nic	chr6	-	492	4	NIC	ENSG00000164304.16	novel	2877	14	NA	NA	41877	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	1.24721912892465	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGAATACAGTGGTTTT	NA	False	NA	NA	False	CATAAA	-1	NA	7347513	7326658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_7326900_7329848_7329889_7334021_7334091_7347371
transcript_116957.known	chr6	-	1118	8	FSM	ENSG00000124783.14	ENST00000479365.5	1118	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	260.878108999398	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTTTTTTTTAAACC	4	True	NA	-58	True	NA	NA	NA	7313182	7289675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7289932_7295384_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_116958.known	chr6	-	1808	10	FSM	ENSG00000124783.14	ENST00000474597.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	347.56262425321	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGAATCTCTTGCTG	-21	True	NA	NA	False	AATAAA	-22	NA	7313207	7268305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7269155_7289867_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_116959.known	chr6	-	3248	9	FSM	ENSG00000124783.14	ENST00000397511.6	3248	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.643800461007	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTATAGCTTCCTC	-12	True	NA	-11	True	CATAAA	-14	NA	7313198	7287569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_116960.known	chr6	-	1094	7	FSM	ENSG00000124783.14	ENST00000462112.1	1094	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	277.475524446151	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAAAAGAACTAATACA	-2	True	NA	NA	False	AATAAA	-13	NA	7313188	7296882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7297210_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_116964.known	chr6	+	2498	17	FSM	ENSG00000124784.9	ENST00000379834.7	2498	17	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	42.0520046341432	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGCATATTCATTCA	-21	True	NA	17	True	CATAAA	-17	NA	7389807	7418037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
transcript_116965.known	chr6	+	960	8	FSM	ENSG00000124784.9	ENST00000475351.5	960	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	104.211127926309	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAATGGTGAAAACTTGG	-36	True	NA	NA	False	NA	NA	NA	7389792	7402848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_7390074_7393098_7393304_7395020_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816
transcript_116966.nnic	chr6	-	936	2	NNC	ENSG00000261189.2	novel	823	2	NA	NA	533	82	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTGGGGGGGACTTTCT	535	False	NA	82	True	AATAAA	-24	NA	7542548	7540362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_7541054_7542303
transcript_116967.nnic	chr6	-	875	2	NNC	ENSG00000261189.2	novel	911	2	NA	NA	713	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	715	False	NA	-9	True	AATAAA	-18	NA	7542368	7540453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_7541054_7542093
transcript_116968.nnic	chr6	-	1112	2	NNC	ENSG00000261189.2	novel	911	2	NA	NA	266	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	12	True	NA	-9	True	AATAAA	-18	NA	7542815	7540453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_7541054_7542303
transcript_116969.nnic	chr6	-	947	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	-36	0	-36	0	multi-exon	FALSE	canonical	3	17	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	NA	False	NA	-9	True	AATAAA	-18	NA	7543117	7540453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7541054_7542770
transcript_116970.known	chr6	-	888	1	FSM	ENSG00000261189.2	ENST00000561592.1	888	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGCTAATTACCTTCTGA	1745	False	NA	-6	True	AATAAA	-21	NA	7541338	7540450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7540400_7541300
transcript_116971.known	chr6	+	9697	24	FSM	ENSG00000096696.15	ENST00000379802.8	9697	24	0	0	0	0	multi-exon	TRUE	canonical	3	148	junction_18	24.8683490125238	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGGTCTTTTGAAGTT	-2	True	NA	13	True	ATTAAA	-28	NA	7541670	7586714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7581570_7582641
transcript_116975.known	chr6	+	4174	9	FSM	ENSG00000168566.13	ENST00000342415.6	4174	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	8.45576726264388	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTATTAGTGATTGT	5	True	NA	15	True	ATTAAA	-22	NA	7590197	7611967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
transcript_116978.nnic	chr6	-	2224	4	NIC	ENSG00000188428.20	novel	2445	6	NA	NA	-31	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	131.423826691442	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTTTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	8064427	8013980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_8015829_8041138_8041269_8062533_8062617_8064264
transcript_116981.known	chr6	-	3030	13	FSM	ENSG00000259040.5	ENST00000439343.2	3030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	375.81751629688	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTCTGGTCTTTCCTT	12	True	NA	-8	True	AATAAA	-12	NA	8064364	7881521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_116982.known	chr6	-	2938	10	FSM	ENSG00000239264.9	ENST00000379757.9	2938	10	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_1	106.360440060563	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCTTTCCTTCAATG	2	True	NA	-3	True	AATAAA	-17	NA	7910788	7881516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7910513
transcript_116990.known	chr6	-	2445	6	FSM	ENSG00000188428.20	ENST00000244777.6	2445	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	126.339859110259	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTTTTTCAA	-17	True	NA	NA	False	ATTAAA	-23	NA	8064393	8013977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8015829_8026366_8026426_8027206_8027400_8041138_8041269_8062533_8062617_8064264
transcript_116995.known	chr6	-	1273	6	FSM	ENSG00000188428.20	ENST00000627748.2	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	133.093951778434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCATATTTTACAGTGCA	-20	True	NA	NA	False	NA	NA	NA	8064396	8015062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8054269_8054373_8062533_8062617_8064264
transcript_117001.known	chr6	-	2659	5	FSM	ENSG00000188428.20	ENST00000397457.7	2659	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	43.8940485715319	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTGTTTATTATTCCA	-13	True	NA	-3	True	AATAAA	-13	NA	8064389	8013566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_11701.known	chr1	-	581	6	FSM	ENSG00000143248.13	ENST00000531954.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	467.750360769503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGAAGAACCTGGTGGA	12	True	NA	NA	False	NA	NA	NA	163321735	163147473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163306232_163306330_163321621
transcript_117016.known	chr6	-	368	4	FSM	ENSG00000188428.20	ENST00000543936.7	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	130.233977474732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGCCATGGAAAGGCT	-9	True	NA	NA	False	NA	NA	NA	8064385	8015723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8015829_8026366_8026426_8062533_8062617_8064264
transcript_117030.known	chr6	-	654	3	FSM	ENSG00000124802.12	ENST00000507463.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_2	138	3018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCATTTTCAGCTTAT	-13	True	NA	1	True	AATAAA	-33	NA	8102559	8089953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8090282_8097266_8097468_8102434
transcript_117031.known	chr6	-	1047	4	FSM	ENSG00000124802.12	ENST00000379715.10	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	1504	junction_1	207.25346800476	9057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCGTTGTTTCTTTCT	-2	True	NA	-3	True	AGTAAA	-17	NA	8102548	8079394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8080031_8090185_8090282_8097266_8097468_8102434
transcript_117032.known	chr6	-	591	4	FSM	ENSG00000124802.12	ENST00000502429.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	852.705628507804	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACATTATTTTGAATTTT	141	False	NA	NA	False	NA	NA	NA	8102481	8078493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8078741_8090185_8090282_8097266_8097468_8102434
transcript_117033.known	chr6	-	562	4	FSM	ENSG00000124802.12	ENST00000429723.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	881.684876938593	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGAATCAGTTTTTAC	-2	True	NA	2	True	CATAAA	-16	NA	8102548	8073359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8073511_8090185_8090282_8097266_8097468_8102434
transcript_117035.known	chr6	-	2200	12	FSM	ENSG00000124786.12	ENST00000648867.1	2200	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	38.5321589419445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAGATGTGTTAATAGA	-12	True	NA	-7	True	AATAAA	-18	NA	8435561	8413073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8418743_8418886_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435227
transcript_11704.known	chr1	-	851	5	FSM	ENSG00000143248.13	ENST00000530507.5	851	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	404.698962192887	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATATCTTCAGCTTGT	212	False	NA	-45	True	NA	NA	NA	163202903	163147116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_163147504_163152537_163152717_163161914_163161977_163168257_163168369_163202791
transcript_117049.known	chr6	-	2137	11	FSM	ENSG00000124786.12	ENST00000379660.4	2137	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	28.4887697172061	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	15	True	NA	-1	True	AATAAA	-24	NA	8435483	8413067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435076
transcript_117050.nic	chr6	-	2037	11	NIC	ENSG00000124786.12	novel	2200	12	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	26.6308092254066	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	15	True	NA	-1	True	AATAAA	-24	NA	8435534	8413067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435227
transcript_117051.known	chr6	-	3566	11	FSM	ENSG00000124786.12	ENST00000644923.2	3566	11	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_6	13.1030530793399	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTCTACACTTTCCT	4	True	NA	NA	False	TATAAA	-21	NA	8435545	8411434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_117052.nnic	chr6	-	1840	11	NNC	ENSG00000124786.12	novel	2137	11	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_10	24.3	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	1	True	NA	-1	True	AATAAA	-24	NA	8435548	8413067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435438
transcript_117059.known	chr6	-	1911	10	FSM	ENSG00000124786.12	ENST00000648987.1	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	25.0599281722833	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGGCTGACAAGTGAG	707	False	NA	NA	False	NA	NA	NA	8435271	8412884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435227
transcript_117060.nic	chr6	-	1901	10	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_9	17.3319087733693	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-10	True	NA	-1	True	AATAAA	-24	NA	8435559	8413067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435342
transcript_117061.nnic	chr6	-	1809	10	NNC	ENSG00000124786.12	novel	2137	11	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_9	22.3959872949058	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-14	True	NA	-1	True	AATAAA	-24	NA	8435563	8413067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435438
transcript_117071.nnic	chr6	-	1746	9	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_6	29.4891399501579	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-10	True	NA	-1	True	AATAAA	-24	NA	8435559	8413067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8427936_8428059_8429863_8430158_8435342
transcript_11709.nnic	chr1	+	695	4	NNC	ENSG00000232892.1	novel	2633	4	NA	NA	25883	4787	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTTTGAATTGGGATTT	NA	False	NA	NA	False	ATTAAA	-17	NA	163187557	163217810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_163187664_163206696_163206841_163210792_163211056_163217628
transcript_117095.nic	chr6	-	1793	3	ISM	ENSG00000124786.12	ENST00000644923.2	3566	11	-34	17213	-18	-15574	5prime_fragment	FALSE	canonical	3	79	junction_2	11.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAGATATTTTAGTTTA	399	False	NA	NA	False	AATAAA	-15	NA	8435579	8428647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_8430158_8434384_8434431_8435342
transcript_1171.known	chr1	-	1614	9	FSM	ENSG00000097021.20	ENST00000377855.6	1614	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	220.62039655254	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-26	True	NA	-4	True	AATAAA	-17	NA	6385813	6264272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6385493
transcript_117101.nic	chr6	-	959	3	ISM	ENSG00000124786.12	ENST00000644923.2	3566	11	-34	18047	-18	-16408	5prime_fragment	FALSE	canonical	3	79	junction_2	11.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGGATATTTTATGG	399	False	NA	-14	True	AATAAA	-19	NA	8435579	8429481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_8430158_8434384_8434431_8435342
transcript_117106.nic	chr6	-	893	2	ISM	ENSG00000124786.12	ENST00000649788.1	2442	12	-22	18019	2	-16408	5prime_fragment	FALSE	canonical	3	48	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGGATATTTTATGG	-10	True	NA	-14	True	AATAAA	-19	NA	8435559	8429481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_8430158_8435342
transcript_117108.known	chr6	+	919	4	FSM	ENSG00000285219.3	ENST00000643889.1	919	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATTAAACAAAACTAAATT	6	True	NA	NA	False	AAGAAA	-43	NA	8435639	8653796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_8436179_8437962_8438032_8558584_8558644_8653544
transcript_11711.nnic	chr1	+	394	2	NNC	ENSG00000232892.1	novel	2633	4	NA	NA	41518	-6197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCAGTCTCAGGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	163203192	163206826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_163203457_163206696
transcript_117111.known	chr6	+	1623	3	FSM	ENSG00000285219.3	ENST00000644038.1	1623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTTTTGTGATTTT	6	True	NA	NA	False	AATAAA	-24	NA	8435639	8471005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_8436179_8437962_8438032_8469990
transcript_117113.nnic	chr6	+	986	3	NIC	ENSG00000285219.3	novel	979	4	NA	NA	7	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAAAAGTTTTGGGACAG	NA	False	NA	NA	False	AATAAA	-19	NA	8435612	8501627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_8436179_8437962_8438032_8501276
transcript_117115.known	chr6	+	1368	3	FSM	ENSG00000285219.3	ENST00000646488.1	1368	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAGTAATGATATCA	4	True	NA	NA	False	AATAAA	-16	NA	8435637	8470725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_8436179_8437939_8438032_8469990
transcript_117119.known	chr6	+	947	2	FSM	ENSG00000285219.3	ENST00000503668.2	947	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGAGCTTGACTCTA	7301	False	NA	NA	False	NA	NA	NA	8652136	8654237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_8652391_8653544
transcript_117120.known	chr6	-	482	1	FSM	ENSG00000229765.2	ENST00000417077.2	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGTGTTAAAAAAATAAAAG	NA	False	NA	NA	False	NA	NA	NA	10214362	10213880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10213900_10214400
transcript_117122.known	chr6	+	1108	5	FSM	ENSG00000111846.20	ENST00000397423.7	1108	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	111.194649151836	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGTAGATAATACTGT	21	False	NA	NA	False	AGTAAA	-5	NA	10521331	10626947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10521418_10527473_10527661_10528630_10528842_10621350_10621444_10626416
transcript_117124.known	chr6	+	4579	3	FSM	ENSG00000111846.20	ENST00000316170.9	4579	3	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_1	65	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	-5	True	NA	12	True	AATAAA	-19	NA	10555808	10629368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10557343_10621350_10621444_10626416
transcript_117125.known	chr6	+	4200	3	FSM	ENSG00000111846.20	ENST00000265012.5	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	66	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	-2	True	NA	12	True	AATAAA	-19	NA	10585759	10629368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10586915_10621350_10621444_10626416
transcript_117126.nnic	chr6	+	1774	2	NNC	ENSG00000111846.20	novel	779	2	NA	NA	-17	43081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTGTTATCTTTG	NA	False	NA	15	True	GATAAA	-19	NA	10555791	10573348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_10557347_10573129
transcript_117128.nic	chr6	-	762	6	NIC	ENSG00000137434.12	novel	682	6	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.46260011349906	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	10694668	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_10671599_10672546_10672637_10683186_10683233_10684848_10684924_10686965_10687165_10694493
transcript_117129.nic	chr6	-	739	6	NIC	ENSG00000137434.12	novel	627	5	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	7.19444229944198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	-25	True	NA	-2	True	ATTAAA	-17	NA	10694638	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_10671599_10672546_10672637_10683186_10683233_10686965_10687165_10687479_10687562_10694493
transcript_117131.nic	chr6	-	724	6	NIC	ENSG00000137434.12	novel	627	5	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	6.91664658631623	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	-25	True	NA	-2	True	ATTAAA	-17	NA	10694638	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_10671599_10683186_10683233_10684848_10684924_10686965_10687165_10687479_10687562_10694493
transcript_117134.nic	chr6	-	687	5	NIC	ENSG00000137434.12	novel	682	6	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	8.15475321515004	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	10694668	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_10671599_10672546_10672637_10683186_10683233_10686965_10687165_10694493
transcript_117135.nnic	chr6	-	781	5	NNC	ENSG00000137434.12	novel	682	6	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.15475321515004	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	10694893	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_10671599_10672546_10672637_10683186_10683233_10686965_10687165_10694624
transcript_117137.known	chr6	-	541	5	FSM	ENSG00000137434.12	ENST00000460742.6	541	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.28010988928052	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCGTCTTTTGTTTTG	80	False	NA	2	True	ATTAAA	-21	NA	10694533	10671417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10671599_10683186_10683233_10684848_10684924_10686965_10687165_10694493
transcript_117138.known	chr6	-	627	5	FSM	ENSG00000137434.12	ENST00000259983.8	627	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.8140512819021	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	-3	True	NA	-2	True	ATTAAA	-17	NA	10694616	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10671599_10683186_10683233_10686965_10687165_10687479_10687562_10694493
transcript_117140.known	chr6	-	430	4	FSM	ENSG00000137434.12	ENST00000379586.5	430	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.42809041582063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	4	True	NA	-2	True	ATTAAA	-17	NA	10694609	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10671599_10683186_10683233_10686965_10687057_10694493
transcript_117142.nic	chr6	-	597	4	NIC	ENSG00000137434.12	novel	627	5	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	1.88561808316413	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	NA	False	NA	-2	True	ATTAAA	-17	NA	10694668	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_10671599_10683186_10683233_10686965_10687165_10694493
transcript_117147.nnic	chr6	+	480	3	NNC	ENSG00000285763.1	novel	3467	6	NA	NA	4	-8450	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	0.5	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCCTCCTTTCAGTGTG	NA	False	NA	NA	False	AATACA	-18	NA	10659501	10684410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_10659607_10672716_10672829_10684147
transcript_117150.nnic	chr6	-	362	3	NIC	ENSG00000137434.12	novel	627	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	9.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	-19	True	NA	-2	True	ATTAAA	-17	NA	10694632	10671421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_10671599_10683186_10683233_10694493
transcript_117156.nnic	chr6	+	1412	9	NIC	ENSG00000111845.5	novel	1523	10	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	242.513627194432	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	-28	True	NA	29	True	TATAAA	-23	NA	10694919	10709782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10695070_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_117160.known	chr6	+	1523	10	FSM	ENSG00000111845.5	ENST00000379568.4	1523	10	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	51.4186400365653	6341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	24	True	NA	29	True	TATAAA	-23	NA	10694971	10709782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_117171.known	chr6	+	899	5	FSM	ENSG00000111843.14	ENST00000467415.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	438.979142443009	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	15	True	NA	NA	False	AATAAA	-18	NA	10723124	10731129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10723242_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_117174.known	chr6	+	472	4	FSM	ENSG00000111843.14	ENST00000466421.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	482.718229290016	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	-1	True	NA	NA	False	AATATA	-30	NA	10723108	10730763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10723242_10725906_10726009_10728639_10728728_10730614
transcript_117177.known	chr6	+	1016	6	FSM	ENSG00000111843.14	ENST00000229563.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	3	844	junction_1	89.824272888791	15438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	-40	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_117178.known	chr6	-	1150	2	FSM	ENSG00000272097.2	ENST00000659819.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATCTATACTTAACTT	NA	False	NA	NA	False	AATAAA	-25	NA	10747619	10743323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10744315_10747460
transcript_117179.known	chr6	-	480	2	FSM	ENSG00000272097.2	ENST00000606652.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGCATATTCTTAAAGAC	NA	False	NA	NA	False	AATAAA	-9	NA	10747663	10746952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10747230_10747460
transcript_11719.known	chr1	+	1842	14	FSM	ENSG00000143228.13	ENST00000367900.7	1842	14	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	43.5309860393965	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTGTTTTGTTTATT	0	True	NA	43	True	AATATA	-24	NA	163321934	163355764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_117194.known	chr6	+	871	5	FSM	ENSG00000137210.14	ENST00000491103.5	871	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	522.829023199746	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGTTTACTATAAATA	14	False	NA	NA	False	AATGAA	-1	NA	10747772	10756958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_117205.known	chr6	+	455	4	FSM	ENSG00000137210.14	ENST00000480194.5	455	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	550.836333829448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	14	False	NA	NA	False	NA	NA	NA	10747772	10756615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747886_10751132_10751235_10755141_10755233_10756466
transcript_11721.nic	chr1	+	1793	14	NIC	ENSG00000143228.13	novel	1842	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_1	64.0583129314323	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	1	True	NA	38	True	AGTAAA	-45	NA	163321935	163355759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_163322067_163326074_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_117219.known	chr6	+	929	6	FSM	ENSG00000137210.14	ENST00000379542.10	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_5	116.286886620977	16407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	-8	True	NA	NA	False	AATAAA	-18	NA	10747804	10756981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_117220.known	chr6	+	502	5	FSM	ENSG00000137210.14	ENST00000463100.5	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	659.874372513435	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGTGAATTAATAAAT	-2	True	NA	-10	True	NA	NA	NA	10747810	10829165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10829006
transcript_117221.known	chr6	+	787	5	FSM	ENSG00000137210.14	ENST00000379530.7	787	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	541.36280579663	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCAATGAAAATAAAGTT	-2	True	NA	NA	False	NA	NA	NA	10747810	10756947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141_10755233_10756466
transcript_117222.known	chr6	+	888	5	FSM	ENSG00000137210.14	ENST00000612333.4	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	527.705114149939	2272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	0	True	NA	NA	False	AATAAA	-8	NA	10747758	10756971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10751132_10751235_10755141_10755233_10756466
transcript_117223.known	chr6	+	730	4	FSM	ENSG00000137210.14	ENST00000473276.5	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	571.104388200811	2452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	4	True	NA	NA	False	AATAAA	-10	NA	10747816	10756973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10755141_10755233_10756466
transcript_117224.known	chr6	+	752	7	FSM	ENSG00000137210.14	ENST00000473166.5	752	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	651.525901250288	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTCTTATTTTAAATCA	0	True	NA	11	True	AATAAA	-3	NA	10747758	10829186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10826563_10826613_10827696_10827825_10829006
transcript_117225.known	chr6	+	559	5	FSM	ENSG00000137210.14	ENST00000473807.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	682.43621496811	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCCTCCTGCCTGGGCT	-12	True	NA	NA	False	NA	NA	NA	10747800	10802536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10802330
transcript_117229.nnic	chr6	+	1103	7	NIC	ENSG00000137210.14	novel	929	6	NA	NA	-25	284	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	615.736054563064	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTGTGTAATGTTAAC	NA	False	NA	6	True	ATTAAA	-16	NA	10747733	10802820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10770076_10770205_10802330
transcript_117232.nnic	chr6	+	691	6	NNC	ENSG00000137210.14	novel	929	6	NA	NA	-25	4871	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	668.397785753364	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATATGTGTGTATGTAT	NA	False	NA	5	True	AATAAA	-15	NA	10747733	10857624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10856588_10856706_10857444
transcript_117239.nnic	chr6	+	540	4	NIC	ENSG00000137210.14	novel	502	5	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	590.560374183331	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	NA	False	NA	28	True	AATAAA	-20	NA	10747733	10829203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10749201_10749269_10770076_10770205_10829006
transcript_117240.nnic	chr6	+	523	4	NNC	ENSG00000137210.14	novel	1589	5	NA	NA	-25	4871	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	607.654141395873	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATATGTGTGTATGTAT	NA	False	NA	5	True	AATAAA	-15	NA	10747733	10857624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_10747882_10749201_10749269_10770076_10770205_10857444
transcript_117241.nnic	chr6	+	730	3	NIC	ENSG00000137210.14	novel	929	6	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	651	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	NA	False	NA	NA	False	AATAAA	-18	NA	10747733	10756981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10749201_10749269_10756466
transcript_117242.nnic	chr6	+	626	2	NIC	ENSG00000137210.14	novel	929	6	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	12	False	NA	NA	False	AATAAA	-18	NA	10747770	10756981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10756466
transcript_117248.nnic	chr6	+	547	4	NIC	ENSG00000137210.14	novel	752	7	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	20.4178571081514	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	-25	True	NA	28	True	AATAAA	-20	NA	10747787	10829203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10770076_10770205_10827696_10827825_10829006
transcript_117251.nnic	chr6	+	419	3	NIC	ENSG00000137210.14	novel	374	3	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	24.5	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	-25	True	NA	28	True	AATAAA	-20	NA	10747787	10829203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10770076_10770205_10829006
transcript_117256.known	chr6	+	2909	30	FSM	ENSG00000153157.13	ENST00000283141.11	2909	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.21515087651469	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTGGATGTGTCTCTT	-15	True	NA	141	True	AATAAA	-25	NA	10887051	10974309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10887136_10891512_10891582_10893866_10894005_10894084_10894205_10898010_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10906019_10906055_10907541_10907685_10910147_10910201_10910823_10910870_10912672_10912766_10912866_10912928_10924495_10924642_10926338_10926433_10927239_10927368_10928402_10928451_10930369_10930515_10931439_10931490_10935057_10935188_10942458_10942530_10942676_10942747_10955115_10955218_10956135_10956243_10958783_10958876_10961304_10961405_10961499_10961559_10963781_10963844_10973951
transcript_117260.known	chr6	-	3988	8	FSM	ENSG00000197977.4	ENST00000354666.4	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.1398385850373	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGCGAGTTTTATT	7	True	NA	NA	False	AATAAA	-18	NA	11044305	10980758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10983907_10989702_10989838_10990317_10990443_10995006_10995179_11000086_11000165_11005371_11005560_11010745_11010810_11044227
transcript_117265.nnic	chr6	-	627	5	NNC	ENSG00000197977.4	novel	3988	8	NA	NA	-42	-18983	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	15.7698287879102	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTATTTGCTTATATT	87	False	11044366	-8	True	AATAAA	-14	NA	11044347	10999741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_10999919_11000086_11000165_11005371_11005560_11010745_11010810_11044227
transcript_117266.nic	chr6	-	795	4	ISM	ENSG00000197977.4	ENST00000354666.4	3988	8	-42	18983	-42	-18983	5prime_fragment	FALSE	canonical	3	28	junction_1	8.37987005998436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTATTTGCTTATATT	87	False	11044366	-8	True	AATAAA	-14	NA	11044347	10999741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_11000165_11005371_11005560_11010745_11010810_11044227
transcript_117267.known	chr6	+	1894	3	FSM	ENSG00000230314.7	ENST00000661751.1	1894	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTTTCTGTGGATTTC	NA	False	NA	NA	False	AATAAA	-24	NA	11043481	11079147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_11043826_11047908_11048000_11077688
transcript_117269.known	chr6	+	4887	2	FSM	ENSG00000224531.6	ENST00000416247.4	4887	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTATGTGTCTCTGG	31	True	NA	NA	False	AATAAA	-16	NA	11093833	11138733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_11094390_11134402
transcript_117271.known	chr6	+	1251	3	FSM	ENSG00000224531.6	ENST00000376935.4	1251	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAGCATTGTGTCATA	14	True	NA	4	True	AATAAA	-19	NA	11094230	11135811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_11094390_11134402_11134988_11135304
transcript_117272.known	chr6	-	4522	7	FSM	ENSG00000111859.17	ENST00000379446.10	4522	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	5.78551831923659	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGGTTTTCTTTTTC	3	True	NA	-3	True	ATTAAA	-23	NA	11232668	11183297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_11185672_11188217_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
transcript_117273.known	chr6	-	3341	3	FSM	ENSG00000111859.17	ENST00000379433.5	3341	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGAGGAAGGAGGGCA	9929	False	NA	NA	False	NA	NA	NA	11232658	11198307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_11201047_11213280_11213728_11232503
transcript_117275.known	chr6	+	8891	3	FSM	ENSG00000205269.6	ENST00000379426.2	8891	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGTGTTTGACTCTTGGT	-19	True	NA	NA	False	AATAAA	-20	NA	11537748	11583524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_11538375_11565665_11565837_11575430
transcript_117276.known	chr6	+	579	4	FSM	ENSG00000095951.17	ENST00000491710.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTCAAAATCTGAAGAAT	-7	True	NA	NA	False	NA	NA	NA	12008761	12120157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12008876_12015525_12015669_12089183_12089238_12119889
transcript_117277.known	chr6	+	585	4	FSM	ENSG00000095951.17	ENST00000487103.5	585	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.2659863237109	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTAGATGGAGATCCGAA	25	True	NA	NA	False	NA	NA	NA	12011999	12120222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12012055_12015525_12015669_12089183_12089238_12119889
transcript_117279.known	chr6	+	576	4	FSM	ENSG00000095951.17	ENST00000478545.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCCAAAGAAGCCCTTG	196	False	NA	NA	False	NA	NA	NA	12012701	12120180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12012790_12015525_12015669_12089183_12089238_12119889
transcript_117286.known	chr6	+	485	2	FSM	ENSG00000229896.2	ENST00000607445.1	485	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCAGAGCCCAAGGTAGAA	134	False	NA	NA	False	NA	NA	NA	12007869	12008643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12007990_12008278
transcript_117287.known	chr6	+	2035	5	FSM	ENSG00000078401.7	ENST00000379375.6	2035	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.08972473588517	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTGGAATCATTACTG	0	True	NA	NA	False	AATAAA	-20	NA	12290360	12297194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12290694_12292340_12292510_12293940_12294097_12294260_12294405_12295961
transcript_117289.known	chr6	+	615	1	FSM	ENSG00000212802.4	ENST00000391491.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39664	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGTAAAGTCTGTAAAA	42	False	NA	NA	False	NA	NA	NA	12514109	12514724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12514100_12514700
transcript_117290.known	chr6	+	3045	13	FSM	ENSG00000112137.19	ENST00000675203.2	3045	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.94061961926055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTGTCCAGTGTCAT	-2	True	NA	NA	False	NA	NA	NA	13013553	13287837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13014140_13053364_13053530_13160203_13160285_13182518_13182687_13184798_13185006_13205814_13206137_13227815_13228064_13230036_13230194_13272859_13272916_13278267_13278330_13283421_13283563_13286145_13286223_13287062
transcript_117292.nic	chr6	+	1099	4	ISM	ENSG00000112137.19	ENST00000434977.1	760	5	-94	44923	-94	382	5prime_fragment	FALSE	canonical	2	8	junction_1	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAATCTGCAAATTATGTG	NA	False	NA	NA	False	NA	NA	NA	13053362	13185481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_13053530_13160203_13160285_13182518_13182687_13184798
transcript_117298.nic	chr6	-	1155	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	240.847822222639	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	NA	False	NA	-21	True	AATAAA	-16	NA	13328566	13304950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_117300.nic	chr6	-	1201	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	289.949467800082	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-33	True	NA	-21	True	AATAAA	-16	NA	13328555	13304950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
transcript_117304.known	chr6	-	1084	7	FSM	ENSG00000145979.18	ENST00000379307.6	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	281.490921503499	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	NA	False	NA	-24	True	AATAAA	-13	NA	13328583	13304953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
transcript_117307.known	chr6	-	1027	7	FSM	ENSG00000145979.18	ENST00000343141.8	1027	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	289.738196001532	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	NA	False	NA	-24	True	AATAAA	-13	NA	13328583	13304953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_117318.known	chr6	-	473	1	FSM	ENSG00000272379.1	ENST00000606393.1	473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACCGTCACATTGTTTGG	NA	False	NA	-5	True	AATAAA	-20	NA	13290490	13290017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13290000_13290500
transcript_117319.known	chr6	-	1282	8	FSM	ENSG00000145979.18	ENST00000379300.8	1282	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	292.831915289719	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-15	True	NA	-21	True	AATAAA	-16	NA	13328537	13304950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_117320.known	chr6	-	1116	8	FSM	ENSG00000145979.18	ENST00000356436.8	1116	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	246.221403602199	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-9	True	NA	-21	True	AATAAA	-16	NA	13328531	13304950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_117321.known	chr6	-	2229	8	FSM	ENSG00000145979.18	ENST00000606214.5	2229	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	310.338722123069	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTACCCAGTCTCAGGTA	1610	False	NA	NA	False	ATTAAA	-15	NA	13326912	13266541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13267836_13305061_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786
transcript_117322.known	chr6	-	972	7	FSM	ENSG00000145979.18	ENST00000422136.5	972	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	298.515028469627	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCACTGAACAGTGCA	-9	True	NA	-42	True	AATAAA	-3	NA	13328531	13306444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
transcript_117323.known	chr6	-	8796	2	FSM	ENSG00000145990.11	ENST00000379287.4	8796	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGCTCTTTGCCTGTTT	19	True	NA	NA	False	AATAAA	-20	NA	13487600	13357829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13365663_13486637
transcript_117324.known	chr6	-	1529	2	FSM	ENSG00000145990.11	ENST00000379278.3	1529	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGGCGAGTGTGATG	1436	False	NA	NA	False	AATAAA	-25	NA	13486183	13469274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13470631_13486010
transcript_117330.known	chr6	+	3900	10	FSM	ENSG00000124523.17	ENST00000680432.1	3900	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	48.3988062295388	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	13574226	13614558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_117336.known	chr6	+	2339	10	FSM	ENSG00000124523.17	ENST00000379262.8	2339	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	47.7912125813941	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTTTTGACTGTTA	8	True	NA	9	True	AATAAA	-24	NA	13574600	13605739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13604475
transcript_117338.nic	chr6	+	1581	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	-50	-114	combination_of_known_junctions	FALSE	canonical	3	130	junction_7	20.15556780595	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTATTCTGATTATATTT	172	False	NA	6	True	NA	NA	NA	13574478	13612173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_117339.nic	chr6	+	1695	10	NIC	ENSG00000124523.17	novel	4659	10	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	130	junction_7	20.15556780595	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTAATTTATTGTATAAA	172	False	NA	6	True	AATAAA	-15	NA	13574478	13612287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_117340.known	chr6	+	4564	10	FSM	ENSG00000124523.17	ENST00000606117.2	4564	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	47.8178126839418	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	8	True	NA	NA	False	NA	NA	NA	13574600	13615158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574745_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_117345.known	chr6	+	3401	9	FSM	ENSG00000124523.17	ENST00000680852.1	3401	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	19.2933764541098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGACTCCGTCTCAA	-9	True	NA	NA	False	NA	NA	NA	13574583	13603258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833
transcript_117347.known	chr6	+	4337	9	FSM	ENSG00000124523.17	ENST00000680402.1	4337	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	53.7620625999412	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	-9	True	NA	NA	False	NA	NA	NA	13574583	13615158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13600833_13600950_13611789
transcript_117348.known	chr6	+	3727	9	FSM	ENSG00000124523.17	ENST00000379250.10	3727	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	52.346054053768	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	-9	True	NA	NA	False	AATAAA	-18	NA	13574583	13614558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_117353.known	chr6	+	3555	8	FSM	ENSG00000124523.17	ENST00000681231.1	3555	8	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	20.5108234245001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTGAGTTGCAGCCCAG	-9	True	NA	NA	False	TTTAAA	-44	NA	13574583	13601734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031
transcript_117363.nic	chr6	+	601	4	ISM	ENSG00000124523.17	ENST00000680432.1	3900	10	-31	26047	-31	86	5prime_fragment	FALSE	canonical	2	15	junction_1	78.7273777030583	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAGTTTGACTCAAAT	NA	False	NA	NA	False	ATTAAA	-22	NA	13574195	13588511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330
transcript_117364.nic	chr6	+	535	4	ISM	ENSG00000124523.17	ENST00000681231.1	3555	8	-4	13223	0	86	5prime_fragment	FALSE	canonical	3	131	junction_1	24.5809320861155	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAGTTTGACTCAAAT	-13	True	NA	NA	False	ATTAAA	-22	NA	13574579	13588511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330
transcript_117365.known	chr6	-	1045	1	FSM	ENSG00000261071.1	ENST00000566170.1	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATCTTACACATATATT	35	False	NA	-15	True	AATAAA	-16	NA	13615155	13614110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13614100_13615200
transcript_117372.known	chr6	+	1683	8	FSM	ENSG00000225921.7	ENST00000451315.7	1683	8	0	0	0	0	multi-exon	FALSE	canonical	3	1506	junction_7	81.6033212609409	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAAGTCATCTGTAGT	-11	True	NA	52	True	AATACA	-22	NA	13615334	13621712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407_13620486_13620753
transcript_117375.known	chr6	+	646	4	FSM	ENSG00000225921.7	ENST00000420088.1	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_1	47.3591478902322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTATTTTATTTTA	201	False	NA	NA	False	NA	NA	NA	13615546	13618217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769
transcript_117377.nnic	chr6	-	833	9	NNC	ENSG00000050393.12	novel	1826	10	NA	NA	639	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	154.183940473708	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTACTGTTTTGCCTTAA	587	False	NA	-5	True	AATAAA	-18	NA	13813918	13790787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13813771
transcript_117378.known	chr6	-	5471	9	FSM	ENSG00000050393.12	ENST00000379170.9	5460	9	-11	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	43.6348484585429	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTAACTTTTCATCATT	-63	True	NA	-21	True	AATAAA	-16	NA	13814568	13786556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
transcript_117381.known	chr6	+	3629	3	FSM	ENSG00000180537.13	ENST00000488300.6	3629	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCGGTTTTAGTTTGTT	-20	True	NA	NA	False	AATAAA	-22	NA	13924951	13980310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13925024_13974209_13974365_13976908
transcript_117382.known	chr6	+	2328	5	FSM	ENSG00000112149.10	ENST00000379153.4	2328	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	15.3683928893037	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTGTAAACCAGTTTG	-1	True	NA	NA	False	AATAAA	-45	NA	14117771	14136906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_14117849_14117949_14118066_14131519_14131749_14133648_14133756_14135107
transcript_117390.nnic	chr6	-	319	4	Fusion	ENSG00000229646.2_ENSG00000234261.5	novel	146	2	NA	NA	-12490	-53	multi-exon	FALSE	canonical	3	20	junction_2	0.942809041582063	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATTTGGGCTTGCACT	NA	False	NA	NA	False	AAGAAA	-3	NA	14790098	14597566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_14597600_14599630_14599689_14643950_14644070_14789989
transcript_1174.nnic	chr1	+	314	2	Antisense	novelGene_ENSG00000171680.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAATTCCTTTAAGTTA	NA	False	NA	4	True	AATAAA	-18	NA	6485003	6487697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_6485168_6487547
transcript_11741.known	chr1	-	512	5	FSM	ENSG00000232995.7	ENST00000528019.5	512	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.4339811320566	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGCTGCAACATGAAAGAA	43	True	NA	NA	False	NA	NA	NA	163321704	163300557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_163300692_163306232_163306330_163308543_163308632_163319181_163319292_163321621
transcript_117417.nnic	chr6	-	737	5	NNC	ENSG00000234261.5	novel	1041	4	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	16.0682139642214	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTTGTGTGCTAGATAA	119	False	NA	NA	False	ATTAAA	-15	NA	15022047	14872827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14872980_14873304_14873472_14876139_14876271_14997415_14997476_15021820
transcript_117424.nnic	chr6	-	750	5	NNC	ENSG00000234261.5	novel	1041	4	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	7.29297607290741	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTTGTGTGCTAGATAA	139	False	NA	NA	False	ATTAAA	-15	NA	15022027	14872827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14872980_14873304_14873472_14997415_14997476_15008924_15009085_15021816
transcript_11743.nic	chr1	+	1154	4	ISM	ENSG00000143228.13	ENST00000497990.1	885	11	-153	16729	3	428	intron_retention	FALSE	canonical	3	114	junction_1	70.7405274381116	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAAAAAAACAACTTC	NA	False	NA	NA	False	AGTAAA	-15	NA	163321892	163328989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227
transcript_117434.nnic	chr6	-	606	4	NNC	ENSG00000234261.5	novel	1041	4	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	16.739839372653	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTTGTGTGCTAGATAA	119	False	NA	NA	False	ATTAAA	-15	NA	15022047	14872827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14872980_14873304_14873472_14997415_14997476_15021820
transcript_117443.nnic	chr6	-	568	4	NNC	ENSG00000234261.5	novel	778	4	NA	NA	-63	-7837	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	4.32049379893857	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAGACTATGGAGACT	139	False	NA	NA	False	AATAAA	-21	NA	15022027	14880664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14880802_14997415_14997476_15008924_15009085_15021816
transcript_117458.nnic	chr6	-	424	3	NNC	ENSG00000234261.5	novel	778	4	NA	NA	-83	-7837	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	15	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAGACTATGGAGACT	119	False	NA	NA	False	AATAAA	-21	NA	15022047	14880664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14880802_14997415_14997476_15021820
transcript_11746.known	chr1	-	1441	4	FSM	ENSG00000232995.7	ENST00000439699.1	1441	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.93310961716756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTATGTCTTCCCTG	-5	True	NA	NA	False	AATAAA	-18	NA	163321752	163304210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_163305314_163306232_163306330_163319181_163319292_163321621
transcript_117464.nic	chr6	-	1393	3	NIC	ENSG00000234261.5	novel	1915	5	NA	NA	-83	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_2	10	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCGGTGTCTGAGGGG	119	False	NA	-4	True	AATAAA	-13	NA	15022047	14976212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_14977319_14997415_14997476_15021820
transcript_117469.known	chr6	-	778	4	FSM	ENSG00000234261.5	ENST00000629853.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	15.7691682300198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCAACTTTTCTAGATC	1	True	NA	NA	False	NA	NA	NA	15021964	14661828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_14662294_14789989_14790099_14997415_14997476_15021820
transcript_117470.known	chr6	-	1078	1	FSM	ENSG00000271888.1	ENST00000607711.1	1078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTATTATTTTTACC	3678	False	NA	-4	True	AATAAA	-20	NA	15245000	15243922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15243900_15245000
transcript_117475.known	chr6	+	5595	18	FSM	ENSG00000008083.14	ENST00000397311.4	5595	18	0	0	0	0	multi-exon	TRUE	canonical	2	18	junction_1	170.673791932432	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGACTGAATGGAATGA	2281	False	NA	33	True	AATAAA	-35	NA	15248854	15522040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_15248965_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_11748.known	chr1	-	574	2	FSM	ENSG00000232995.7	ENST00000528818.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGAAATGTACTTCC	6	True	NA	NA	False	NA	NA	NA	163321741	163318837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_163319292_163321621
transcript_117481.nic	chr6	+	1714	3	ISM	ENSG00000008083.14	ENST00000341776.7	6003	18	-94	110851	-94	-97202	5prime_fragment	FALSE	canonical	3	339	junction_2	42.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCCCCTTGTCAGTTC	-2	True	NA	NA	False	AAGAAA	-4	NA	15245974	15411191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_15246585_15374116_15374253_15410223
transcript_117482.known	chr6	-	1518	11	FSM	ENSG00000047579.20	ENST00000513680.5	1518	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	106.572979689976	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAACAGCTAACAATAAA	-40	True	NA	-48	True	NA	NA	NA	15663058	15522842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15660382_15660522_15662813
transcript_117483.known	chr6	-	1383	10	FSM	ENSG00000047579.20	ENST00000344537.10	1383	10	0	0	0	0	multi-exon	TRUE	canonical	1	87	junction_2	48.9628228831974	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-10	True	NA	-12	True	AATAAA	-17	NA	15663028	15522806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_117484.known	chr6	-	1404	10	FSM	ENSG00000047579.20	ENST00000510395.5	1404	10	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_8	78.7781695649245	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	11	True	NA	-15	True	AATAAA	-14	NA	15663007	15522809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651409_15652086_15652141_15662813
transcript_117485.known	chr6	-	1306	9	FSM	ENSG00000047579.20	ENST00000515875.5	1306	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.6605326140305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTAACAATAAAGTGTGA	-12	True	NA	-42	True	NA	NA	NA	15663030	15522836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15652086_15652141_15662813
transcript_117488.known	chr6	-	1305	8	FSM	ENSG00000047579.20	ENST00000622898.4	1305	8	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_7	84.019434097847	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-40	True	NA	-15	True	AATAAA	-14	NA	15663058	15522809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15662813
transcript_117491.known	chr6	-	1359	9	FSM	ENSG00000047579.20	ENST00000355917.7	1359	9	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_7	78.3923425788514	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-40	True	NA	-15	True	AATAAA	-14	NA	15663058	15522809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15652086_15652141_15662813
transcript_117492.known	chr6	-	1010	4	FSM	ENSG00000047579.20	ENST00000462989.6	1010	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.622176948545	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	1	True	NA	-12	True	AATAAA	-17	NA	15586015	15522806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15585718
transcript_117493.known	chr6	-	1880	9	FSM	ENSG00000047579.20	ENST00000338950.9	1880	9	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	50.7364513934508	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTAGATTATCAAGGT	43	True	NA	NA	False	NA	NA	NA	15662975	15523562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_117495.nnic	chr6	-	1479	3	Antisense	novelGene_ENSG00000214027.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTGGGTATGTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	15961511	15903528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_15904596_15960935_15961020_15961183
transcript_117497.nnic	chr6	-	658	3	Antisense	novelGene_ENSG00000214027.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGCATGAATTGAAATC	NA	False	NA	1	True	AATAAA	-15	NA	15961511	15904349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_15904596_15960935_15961020_15961183
transcript_117499.known	chr6	+	3072	7	FSM	ENSG00000007944.15	ENST00000356840.8	3072	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.5277674973257	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	-1	True	NA	11	True	AATAAA	-15	NA	16129085	16148248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_11750.known	chr1	+	1964	14	FSM	ENSG00000143228.13	ENST00000271452.8	1964	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	30.8918709745411	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	-29	True	NA	38	True	AGTAAA	-45	NA	163321953	163355759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_117501.known	chr6	+	2796	6	FSM	ENSG00000007944.15	ENST00000349606.4	2796	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.4439447075719	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	84	False	NA	11	True	AATAAA	-15	NA	16129170	16148248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_16129410_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_117502.nic	chr6	+	776	2	ISM	ENSG00000007944.15	ENST00000356840.8	3072	7	34	17206	34	-17206	5prime_fragment	FALSE	canonical	3	104	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAACCACCCTACC	33	False	NA	NA	False	NA	NA	NA	16129119	16131042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_16129410_16130556
transcript_117503.known	chr6	+	1508	9	FSM	ENSG00000137198.10	ENST00000259727.5	1508	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	9.4339811320566	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTGGAGTTTGTA	-3	True	NA	29	True	AATATA	-23	NA	16238586	16295549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_16238781_16246841_16246962_16250283_16250368_16254561_16254736_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
transcript_117506.nnic	chr6	+	1162	6	NIC	ENSG00000137198.10	novel	675	4	NA	NA	-82	0	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	20.5659913449364	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGGAGTTGCTGGAGT	NA	False	NA	24	True	AATATA	-18	NA	16257890	16295544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_16258122_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
transcript_117507.nnic	chr6	+	1158	6	NNC	ENSG00000137198.10	novel	793	2	NA	NA	449	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	19.7727084639409	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGGAGTTGCTGGAGT	NA	False	NA	24	True	AATATA	-18	NA	16258421	16295544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_16258649_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
transcript_11751.known	chr1	+	1845	13	FSM	ENSG00000143228.13	ENST00000524800.5	1845	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	75.3169229913762	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTGAAATATATATATT	NA	False	NA	6	True	AGTAAA	-13	NA	163321899	163355727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163347762_163347939_163348944_163349081_163355334
transcript_117518.nnic	chr6	-	712	3	NNC	ENSG00000282024.1	novel	1026	2	NA	NA	-80	53	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	102.5	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3132	False	NA	NA	False	AATAAA	-22	NA	16264633	16259047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_16259377_16262176_16262267_16264340
transcript_117522.nnic	chr6	-	1504	3	NNC	ENSG00000282024.1	novel	1026	2	NA	NA	-60	53	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	101	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3152	False	NA	NA	False	AATAAA	-22	NA	16264613	16259047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_16259377_16262176_16263079_16264340
transcript_117523.nic	chr6	-	1767	3	NIC	ENSG00000282024.1	novel	1026	2	NA	NA	-47	53	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	88	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3165	False	NA	NA	False	AATAAA	-22	NA	16264600	16259047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_16259377_16262176_16263355_16264340
transcript_117525.nnic	chr6	+	812	2	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAATTAGCCGGGCGCA	NA	False	NA	NA	False	ACTAAA	-14	NA	16265794	16266654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr6_+_16266098_16266145
transcript_117527.nnic	chr6	+	818	2	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGCCGGGCGCAGTGG	NA	False	NA	NA	False	AAAAAG	-4	NA	16265794	16266658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr6_+_16266123_16266168
transcript_117529.nnic	chr6	-	596	2	NIC	ENSG00000282024.1	novel	1026	2	NA	NA	-60	47	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGCCTGTTTGGTGGT	3152	False	NA	NA	False	AATAAA	-16	NA	16264613	16259053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_16259377_16264340
transcript_117530.known	chr6	-	1026	2	FSM	ENSG00000282024.1	ENST00000632346.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCAGCCCGCCTGCACCC	4839	False	NA	NA	False	TATAAA	-41	NA	16262926	16259100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_16259377_16262176
transcript_117531.known	chr6	-	886	2	FSM	ENSG00000282024.1	ENST00000632370.1	886	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCCCGACATTAAAGAAAAC	3212	False	NA	NA	False	AATACA	-18	NA	16264553	16262681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_16263355_16264340
transcript_117535.known	chr6	+	635	2	FSM	ENSG00000229931.2	ENST00000450930.2	1032	2	0	397	0	-34	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATCTTCTTCGGATGG	186	False	NA	NA	False	NA	NA	NA	16761911	16762618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_16762280_16762351
transcript_117536.known	chr6	+	2684	4	FSM	ENSG00000112183.15	ENST00000379052.10	2684	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTGCATTGGCTGTT	2	True	NA	8	True	ATTAAA	-16	NA	17281360	17293871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17281750_17282804_17282929_17284656_17284712_17291755
transcript_117537.known	chr6	+	2925	13	FSM	ENSG00000112186.13	ENST00000229922.7	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	13.1431752463229	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGATGAATTCTGGAT	5	True	NA	16	True	AATAAA	-22	NA	17393594	17557780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_117544.known	chr6	+	1812	12	FSM	ENSG00000112186.13	ENST00000378990.6	1812	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.3114528737788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATAAAACCTTTGAG	23	False	NA	NA	False	AAAAAG	-41	NA	17393644	17556795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_117548.known	chr6	+	1404	11	FSM	ENSG00000112186.13	ENST00000465994.5	1404	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	34.4802842215664	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATACAGCACTGTTTC	21	True	NA	NA	False	NA	NA	NA	17393711	17556568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_117551.known	chr6	+	1430	10	FSM	ENSG00000112186.13	ENST00000489374.5	1430	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	36.6302849808431	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATGATGACTTGTGAAC	11	True	NA	NA	False	NA	NA	NA	17393632	17556659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_117559.nic	chr6	+	943	4	ISM	ENSG00000112186.13	ENST00000476263.1	891	9	-389	75979	-252	-75979	5prime_fragment	FALSE	canonical	3	102	junction_1	10.6562449087639	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGCAATGTGTCTTC	NA	False	NA	NA	False	AAAAAG	-5	NA	17393342	17463311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995
transcript_117560.nic	chr6	+	1428	3	ISM	ENSG00000112186.13	ENST00000476263.1	891	9	-258	111668	-121	-111668	5prime_fragment	FALSE	canonical	3	102	junction_1	12.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAACTACTGTAGATCCA	93	False	NA	NA	False	AAAACA	-30	NA	17393473	17427622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_17393747_17421554_17421677_17426589
transcript_117562.known	chr6	+	4726	5	FSM	ENSG00000137414.7	ENST00000259963.4	4726	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	9.12071817347735	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCTGTATTTTGTCTAT	9	True	NA	6	True	AATAAA	-15	NA	17600301	17611715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17601122_17602589_17602711_17604905_17605030_17605873_17606014_17608194
transcript_117566.known	chr6	-	1330	3	FSM	ENSG00000137177.20	ENST00000502704.2	1330	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7.5	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGTGAGTCATTATA	4	True	NA	-3	True	AATAAA	-17	NA	17987623	17950405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_17951430_17987053_17987145_17987408
transcript_11757.known	chr1	+	598	1	FSM	ENSG00000213070.3	ENST00000444896.1	598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAGAAACTGTTTATC	24	False	NA	NA	False	NA	NA	NA	164356766	164357364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_164356800_164357400
transcript_117570.nnic	chr6	-	1803	10	NNC	ENSG00000137364.5	novel	3184	9	NA	NA	-84	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	129.025502312192	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	988	False	NA	0	True	ATTAAA	-24	NA	18155161	18128310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_18128802_18130266_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_11758.known	chr1	+	1459	8	FSM	ENSG00000185630.19	ENST00000367897.5	1459	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	40.8506488345544	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGACTCCCGGGGTCCCCG	50	False	NA	-93	True	NA	NA	NA	164559822	164846955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_164560014_164563237_164563312_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
transcript_117584.known	chr6	-	3184	9	FSM	ENSG00000137364.5	ENST00000309983.5	3184	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_8	27.5927413462309	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-8	True	NA	0	True	ATTAAA	-24	NA	18155077	18128310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_1176.known	chr1	-	2664	9	FSM	ENSG00000171680.23	ENST00000487949.4	2664	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	12.4291743490869	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGAAGAGTCCTTTGCTT	-2	True	NA	-1	True	TATAAA	-18	NA	6471583	6467121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6467573_6467824_6468587_6469041_6469242_6469334_6469451_6469543_6469677_6470235_6470356_6470505_6470644_6470734_6470885_6470989
transcript_117605.known	chr6	-	1360	11	FSM	ENSG00000124795.17	ENST00000652576.1	1360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	502.057855231845	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTATACCAGCAAAGAG	0	True	NA	NA	False	NA	NA	NA	18264267	18225665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264097
transcript_117606.known	chr6	-	3142	11	FSM	ENSG00000124795.17	ENST00000652689.1	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_10	112.952379346342	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTACATGTGAAAGTCT	-11	True	NA	-6	True	ATTAAA	-23	NA	18264530	18223859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_117614.nic	chr6	-	845	7	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	20	25351	-7	6039	5prime_fragment	FALSE	canonical	3	1455	junction_6	120.52477845747	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAAGAGTCTTCAGATG	15	True	NA	14	True	AAGAAA	-3	NA	18264504	18249696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_11762.known	chr1	+	7087	9	FSM	ENSG00000185630.19	ENST00000420696.7	7087	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	35.423994339995	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTATTTTGTGCACATT	1	True	NA	26	True	AATAAA	-27	NA	164559183	164851831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_164560014_164563237_164563312_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164820071_164820185_164821536_164821627_164846583
transcript_117620.known	chr6	-	2851	10	FSM	ENSG00000124795.17	ENST00000651992.1	2851	10	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_4	103.479227950753	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	9	True	NA	-61	True	ACTAAA	-40	NA	18264208	18224216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842
transcript_117621.known	chr6	+	5032	8	FSM	ENSG00000137393.10	ENST00000259939.4	5032	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	5.52175659716791	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGTGTTAACCTTTGT	1	True	NA	7	True	AATAAA	-14	NA	18387349	18468870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_18387631_18399498_18399700_18427580_18427686_18439683_18439745_18457154_18457360_18459606_18459752_18463290_18463381_18464926
transcript_117627.known	chr6	-	1857	2	FSM	ENSG00000228412.9	ENST00000457670.2	1857	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTGCAGGTTTTTCTGT	1768	False	NA	NA	False	AATAAA	-15	NA	19804787	19802166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_19803911_19804674
transcript_11763.known	chr1	+	438	1	FSM	ENSG00000185630.19	ENST00000605467.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATTTGCAAATTTAGTT	240	False	NA	NA	False	AATAAA	-15	NA	164560012	164560450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_164560000_164560400
transcript_117634.known	chr6	+	3873	3	FSM	ENSG00000172201.12	ENST00000378700.8	3873	3	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	30	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGAGTTTGTGGTTT	-6	True	NA	15	True	AATAAA	-17	NA	19837369	19842197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_19838196_19838583_19838643_19839209
transcript_117635.known	chr6	-	4325	13	FSM	ENSG00000172197.11	ENST00000324607.8	4325	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	6.52080005316321	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCAGTTGTTTTTTTTT	-20	True	NA	1	True	AATAAA	-42	NA	20212469	20099683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698_20128754_20131143_20131200_20144219_20144316_20151184_20151263_20152623_20152770_20212135
transcript_117638.known	chr6	-	1882	2	FSM	ENSG00000287483.1	ENST00000665823.1	1882	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGATATTGGTTAATAA	NA	False	NA	NA	False	NA	NA	NA	20334411	20329921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_20331526_20334133
transcript_117641.known	chr6	+	4425	7	FSM	ENSG00000112242.16	ENST00000535432.2	4425	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	37.8901922226144	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTGTGGATGGGTTTT	53	False	NA	16	True	AATAAA	-45	NA	20403678	20493714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_20403833_20479845_20479958_20481223_20481426_20482761_20482921_20486688_20486804_20488112_20488249_20490167
transcript_117642.known	chr6	+	3272	16	FSM	ENSG00000145996.11	ENST00000274695.8	3272	16	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_12	21.7650075937399	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTTTTTGAGAATTT	-21	True	NA	23	True	AATAAA	-23	NA	20534456	21232404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226_21000373_21065047_21065229_21108400_21108464_21198020_21198105_21201109_21201275_21230847
transcript_117647.nic	chr6	+	2522	10	ISM	ENSG00000145996.11	ENST00000274695.8	3272	16	-10	275383	-10	-274420	5prime_fragment	FALSE	canonical	3	168	junction_5	14.3372087784044	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCAAATATGCT	-31	True	NA	NA	False	GATAAA	-31	NA	20534446	20957021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418
transcript_117649.nnic	chr6	+	1080	9	NNC	ENSG00000145996.11	novel	3272	16	NA	NA	-10	230568	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	61.9596642986387	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGGATTGTTTAGATG	-31	True	NA	NA	False	AATAAA	-18	NA	20534446	20790240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20789975
transcript_11765.known	chr1	-	1966	10	FSM	ENSG00000143171.13	ENST00000359842.10	1966	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.4229164972073	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGAGCATGGGGTGTG	-16	True	NA	-1	True	AATAAA	-22	NA	165445126	165400921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165401411_165406811_165406918_165408226_165408319_165409557_165409691_165410701_165410832_165410948_165411110_165417040_165417221_165419869_165420015_165428718_165428967_165444844
transcript_117651.known	chr6	+	1673	6	FSM	ENSG00000145996.11	ENST00000613575.4	1673	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	94.5312646694204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTTAAGATGCCTA	3	True	NA	NA	False	AATAAA	-16	NA	20534480	20559672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_20534575_20535086_20535200_20535350_20535395_20546345_20546524_20548592_20548706_20558541
transcript_117653.nic	chr6	+	1594	5	NIC	ENSG00000145996.11	novel	1673	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	82.0761841218267	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTTAAGATGCCTA	-31	True	NA	NA	False	AATAAA	-16	NA	20534446	20559672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20558541
transcript_117658.nnic	chr6	+	576	3	NNC	ENSG00000145996.11	novel	3272	16	NA	NA	225379	230568	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	8.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACGGATTGTTTAGATG	NA	False	NA	NA	False	AATAAA	-18	NA	20771719	20790240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_20771910_20781144_20781266_20789975
transcript_11766.known	chr1	-	602	2	FSM	ENSG00000143171.13	ENST00000465764.1	602	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTTTCAAGTTTGGTT	59	False	NA	NA	False	ATTAAA	-17	NA	165445172	165436927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165437202_165444844
transcript_117661.known	chr6	+	4869	1	FSM	ENSG00000124766.7	ENST00000244745.4	4869	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCGTTATT	1	True	NA	38	True	AATAAA	-24	NA	21593750	21598619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_21593800_21598600
transcript_11767.known	chr1	+	680	7	FSM	ENSG00000143198.13	ENST00000367885.5	680	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	778.838183878183	2197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	4	True	NA	30	True	AATAAA	-32	NA	165631239	165655620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631294_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_11769.known	chr1	+	720	6	FSM	ENSG00000143198.13	ENST00000495447.5	720	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	669.873838868186	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGACTCTTACCAC	3	True	NA	27	True	AATAAA	-29	NA	165631238	165655617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631294_165649754_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_117697.known	chr6	+	1742	10	FSM	ENSG00000272168.9	ENST00000655154.1	1742	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	29.9571710741424	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGTAGGTAAGACAG	202	False	NA	74	True	AAAAAG	-35	NA	21666387	22194435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_21666646_21668646_21668900_21783631_21783709_21909469_21909604_21978944_21979063_22020338_22020543_22056545_22056691_22110746_22110819_22191566_22191657_22194044
transcript_117723.nic	chr6	+	1567	6	ISM	ENSG00000272168.9	ENST00000606851.5	1889	12	-244	214870	-188	-19722	5prime_fragment	FALSE	canonical	2	13	junction_2	34.1502562215864	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAACAACAAAAAAAC	14	True	NA	NA	False	AAAACA	-5	NA	21666199	21979517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_21666646_21668646_21668900_21783631_21783709_21802656_21802741_21909469_21909604_21978944
transcript_117728.known	chr6	+	1442	5	FSM	ENSG00000272168.9	ENST00000669942.1	1442	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	42.8660704987056	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTCTGCATGCAGAAAT	-15	True	NA	8	True	AATAAA	-25	NA	21666411	21755639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_21666646_21668646_21668900_21742916_21743043_21754699_21754817_21754927
transcript_117735.nnic	chr6	+	1423	4	NNC	ENSG00000272168.9	novel	1455	3	NA	NA	381	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	43.8482230730809	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	346	False	NA	NA	False	NA	NA	NA	21665889	21784591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_21666020_21666565_21666646_21668646_21668900_21783631
transcript_117738.nnic	chr6	+	1779	4	NIC	ENSG00000272168.9	novel	1288	7	NA	NA	-188	-6	combination_of_known_splicesites	TRUE	canonical	3	10	junction_3	44.8131925020102	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATATATATATATATA	14	True	NA	NA	False	NA	NA	NA	21666199	21784585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_21666646_21668646_21668900_21742916_21743043_21783631
transcript_11774.known	chr1	+	1158	6	FSM	ENSG00000143198.13	ENST00000367889.8	1158	6	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	163.952920071586	8179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCTGTTGCTTAAA	-2	True	NA	NA	False	AATAAA	-23	NA	165631233	165656136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631294_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_117747.known	chr6	+	732	5	FSM	ENSG00000272168.9	ENST00000651481.1	732	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.2292770227427	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTCTTTAAAGTGCTT	-9	True	NA	NA	False	AATAAA	-11	NA	21664205	21696753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_21664314_21666565_21666646_21668646_21668900_21680919_21681016_21696558
transcript_11775.known	chr1	+	1130	6	FSM	ENSG00000143198.13	ENST00000627653.1	1130	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	653.132329623944	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTGTTTCTGTTGCTT	1004	False	NA	NA	False	AATAAA	-20	NA	165632239	165656133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_117753.known	chr6	+	1455	3	FSM	ENSG00000272168.9	ENST00000659720.1	1455	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	47	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-23	True	NA	NA	False	NA	NA	NA	21666403	21784591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_21666646_21668646_21668900_21783631
transcript_117758.nnic	chr6	-	1069	2	Antisense	novelGene_ENSG00000272168.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCCGGATGTGG	-5	True	NA	NA	False	NA	NA	NA	22222648	22220786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_22221652_22222444
transcript_11776.known	chr1	+	716	7	FSM	ENSG00000143198.13	ENST00000367884.6	716	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	788.853528158992	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	19	True	NA	30	True	AATAAA	-32	NA	165631254	165655620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631293_165635726_165635823_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_117760.known	chr6	+	1174	3	FSM	ENSG00000272168.9	ENST00000636388.1	1174	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTCCGCAACTCTGGCG	NA	False	NA	NA	False	AATAAA	-20	NA	22063105	22222457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_22063241_22110746_22110921_22221592
transcript_117765.known	chr6	+	596	3	FSM	ENSG00000152954.12	ENST00000463207.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGCTGAGTTGGTAAG	-24	True	NA	NA	False	NA	NA	NA	24126210	24129697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24126341_24128127_24128201_24129304
transcript_117767.known	chr6	+	3939	11	FSM	ENSG00000124532.15	ENST00000378386.8	3939	11	0	0	0	0	multi-exon	TRUE	canonical	3	564	junction_2	44.1317346135409	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATAAGTTCAGATTTC	-21	True	NA	6	True	AATAAA	-18	NA	24402935	24426190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_117768.known	chr6	+	1740	10	FSM	ENSG00000124532.15	ENST00000378353.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_2	44.0807340128441	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCTTATAGTCCTTTC	-3	True	NA	6	True	AATAAA	-15	NA	24402953	24423476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936
transcript_117772.known	chr6	-	1935	7	FSM	ENSG00000111802.14	ENST00000378198.9	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	56.6862711186168	1588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTTTTAGTATGT	-16	True	NA	-16	True	AATAAA	-15	NA	24666899	24649978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24651070_24652982_24653154_24654411_24654531_24657811_24657904_24658560_24658735_24666525_24666612_24666697
transcript_117773.known	chr6	-	2452	5	FSM	ENSG00000112308.13	ENST00000378119.9	2452	5	0	0	0	0	multi-exon	FALSE	canonical	3	2810	junction_2	145.354738484853	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAGTGTTAACTTTTT	1	True	NA	-12	True	AATAAA	-41	NA	24719154	24704860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24706263_24708776_24708912_24714317_24714441_24716147_24716325_24718539
transcript_117776.known	chr6	+	4391	4	FSM	ENSG00000112304.11	ENST00000537591.5	4391	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	467.421294622599	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAGAAAAAAAAAAAA	-49	True	NA	NA	False	AATAAA	-36	NA	24667034	24705065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24667345_24687404_24687694_24697882_24698068_24701458
transcript_117778.known	chr6	+	4041	3	FSM	ENSG00000112304.11	ENST00000230048.5	4041	3	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	18.5	5473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTTCTTCATTTA	-7	True	NA	NA	False	AATAAA	-17	NA	24667076	24705046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24667345_24697882_24698068_24701458
transcript_117784.known	chr6	+	733	3	FSM	ENSG00000112304.11	ENST00000476436.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	2	68	junction_1	479	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTAGAAATATTCTTGG	NA	False	NA	24	True	AATAAA	-16	NA	24687401	24701714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24687694_24697882_24698068_24701458
transcript_117792.known	chr6	+	1039	7	FSM	ENSG00000112312.10	ENST00000620958.4	1039	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	394.248088841982	1626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTGTCTGTTTCTA	26	False	NA	30	True	AATATA	-13	NA	24775412	24786093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24775503_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_11780.known	chr1	-	2696	11	FSM	ENSG00000143149.13	ENST00000354775.5	2395	11	-301	0	-301	0	multi-exon	FALSE	canonical	3	388	junction_10	42.1354957251009	943	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATCGTGTTTTGAAAC	NA	False	NA	-7	True	AATAAA	-18	NA	165698863	165662215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165663145_165665017_165665131_165667308_165667451_165668925_165669014_165669261_165669451_165679441_165679583_165680486_165680684_165682106_165682242_165682980_165683111_165695251_165695398_165698377
transcript_117801.known	chr6	+	1263	7	FSM	ENSG00000112312.10	ENST00000230056.8	1263	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	198.237792113972	4990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTTCTATGCTTT	-33	True	NA	36	True	AATATA	-19	NA	24774936	24786099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24775245_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_117802.known	chr6	+	1133	7	FSM	ENSG00000112312.10	ENST00000356509.7	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	222.374871182275	6843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTCTGTTTCTATG	-39	True	NA	32	True	AATATA	-15	NA	24774930	24786095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24775113_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_117803.nnic	chr6	-	2127	14	NNC	ENSG00000111913.20	novel	2442	14	NA	NA	450	0	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_13	44.091486384535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	364	False	NA	NA	False	AATAAA	-21	NA	24876905	24839358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876815
transcript_117804.known	chr6	-	2442	14	FSM	ENSG00000111913.20	ENST00000378023.8	2442	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	43.3607408395411	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	NA	False	NA	NA	False	AATAAA	-21	NA	24877355	24839358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_117805.known	chr6	-	2200	14	FSM	ENSG00000111913.20	ENST00000644621.1	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	43.5421308592415	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTCTTTTTTGGATAT	9	True	NA	NA	False	NA	NA	NA	24911063	24839441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24910817
transcript_117806.nic	chr6	-	2250	14	NIC	ENSG00000111913.20	novel	2442	14	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	31.8771681012264	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATCTCCAATTGAG	699	False	NA	NA	False	AATAAA	-21	NA	24936050	24839358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_24839600_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_117809.known	chr6	-	2704	14	FSM	ENSG00000111913.20	ENST00000645100.1	2704	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	27.6086342724614	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTGTCTCAAAAAAAAA	8	True	NA	NA	False	NA	NA	NA	24935948	24839978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_117810.known	chr6	-	3614	14	FSM	ENSG00000111913.20	ENST00000540914.5	3614	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	40.6003760148152	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAAAAAAAAAGTGTGG	NA	False	NA	NA	False	AATAAA	-7	NA	24877365	24839372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24876950
transcript_117819.nnic	chr6	-	924	3	NNC	ENSG00000111913.20	novel	1030	3	NA	NA	5823	0	intron_retention	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGCTCGTCAAATTT	-26	True	NA	NA	False	AATAAA	-32	NA	25036195	25014951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_25015584_25015757_25015836_25035981
transcript_117821.known	chr6	+	499	2	FSM	ENSG00000214975.4	ENST00000414949.2	499	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGTGTTTTATCTT	41	False	NA	NA	False	NA	NA	NA	24976418	24976982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24976489_24976553
transcript_117827.nnic	chr6	+	883	3	NNC	ENSG00000079691.18	novel	5485	37	NA	NA	76	-166813	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	54.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTGTTGCTGT	-12	True	NA	NA	False	ATTAAA	-15	NA	25279449	25285784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_25279836_25284811_25284910_25285385
transcript_117830.nnic	chr6	-	889	2	Antisense	novelGene_ENSG00000079691.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATGGTGTCGTGTTTCA	NA	False	NA	NA	False	NA	NA	NA	25280053	25278079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_25278802_25279886
transcript_117832.known	chr6	+	9418	8	FSM	ENSG00000112343.11	ENST00000357085.5	9418	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.57998973889762	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTTTCACCTTTCTG	-6	True	NA	NA	False	ATTAAA	-23	NA	25962801	25991231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_25962856_25963048_25963283_25966334_25966934_25969324_25969421_25971868_25972100_25973053_25973077_25973172_25973286_25983163
transcript_117836.known	chr6	+	2541	3	FSM	ENSG00000272462.4	ENST00000656572.1	2541	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCGGTCCCCTGGACCCC	-19	True	NA	NA	False	AATAAA	-44	NA	25992691	26000070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_25992919_25993996_25994143_25997902
transcript_117837.known	chr6	+	4130	2	FSM	ENSG00000272462.4	ENST00000606723.2	4130	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTCTAAATGTGTCAT	-4	True	NA	NA	False	CATAAA	-13	NA	25992661	26001775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_25992919_25997902
transcript_117839.known	chr6	+	508	1	FSM	ENSG00000275714.2	ENST00000613854.2	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGTAGCTGTAAGAA	-2	True	NA	NA	False	NA	NA	NA	26020450	26020958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26020400_26021000
transcript_117840.known	chr6	+	402	1	FSM	ENSG00000278637.2	ENST00000617569.2	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAACAAAAGAAGAGCTG	-2	True	NA	NA	False	NA	NA	NA	26021648	26022050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26021600_26022000
transcript_117841.known	chr6	-	511	1	FSM	ENSG00000286522.2	ENST00000621411.3	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAACGAAAGTAGCTGT	1	True	NA	NA	False	NA	NA	NA	26032099	26031588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26031600_26032100
transcript_117842.known	chr6	-	527	1	FSM	ENSG00000278463.2	ENST00000615868.2	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCATTAAATGAGCTG	-2	True	NA	NA	False	NA	NA	NA	26033618	26033091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26033100_26033600
transcript_117843.known	chr6	-	731	1	FSM	ENSG00000187837.4	ENST00000343677.4	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	514	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATCTCAATAAAAGAGCT	0	True	NA	0	True	NA	NA	NA	26056470	26055739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26055700_26056500
transcript_117844.nic	chr6	+	1458	2	ISM	ENSG00000010704.19	ENST00000483782.1	1245	3	88	794	2	-794	5prime_fragment	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAATTCAGAG	14	True	NA	NA	False	NA	NA	NA	26087406	26092188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_26087517_26090840
transcript_117845.known	chr6	+	405	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCGTTTAAAGAGCTG	-1	True	NA	4	True	AAAACA	-40	NA	26103932	26104337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26103900_26104300
transcript_117846.known	chr6	-	659	2	FSM	ENSG00000180596.8	ENST00000314332.5	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTTTTATATGTATA	2308	False	NA	15	True	ATTAAA	-18	NA	26123910	26114872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26115136_26123514
transcript_117851.nnic	chr6	+	1548	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	-2	-127	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	7.5	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGAACTATGTGTA	-10	True	NA	10	True	AATAAA	-18	NA	26124169	26138957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_117852.nnic	chr6	+	1707	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	7.5	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	-10	True	NA	15	True	AATAAA	-24	NA	26124169	26139116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_117855.known	chr6	+	1668	2	FSM	ENSG00000180573.10	ENST00000314088.6	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	240	False	NA	15	True	AATAAA	-24	NA	26124144	26139116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26124750_26138053
transcript_117858.known	chr6	+	1462	2	FSM	ENSG00000180573.10	ENST00000602637.1	1462	2	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATAAAAGGTAATGCAA	23	False	NA	-17	True	AATAGA	-32	NA	26124202	26139084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26124634_26138053
transcript_117861.known	chr6	+	519	1	FSM	ENSG00000180573.10	ENST00000377791.4	519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTTTCAAAGGAAGAGCTA	-8	True	NA	NA	False	NA	NA	NA	26124171	26124690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26124200_26124700
transcript_117862.known	chr6	+	787	1	FSM	ENSG00000168298.7	ENST00000304218.6	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTCTCAGTAAAAGAGCT	-1	True	NA	25	True	NA	NA	NA	26156328	26157115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26156300_26157100
transcript_117864.known	chr6	+	496	1	FSM	ENSG00000158373.9	ENST00000377777.6	486	1	24	-34	0	34	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGGGGTTATTGGACT	19	False	NA	15	True	AATAAA	-22	NA	26158145	26158641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26158100_26158600
transcript_117865.known	chr6	+	789	2	FSM	ENSG00000158373.9	ENST00000289316.2	789	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTTCATTGTTGATC	19	False	NA	13	True	AATAAA	-20	NA	26158145	26171349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26158560_26170974
transcript_117866.known	chr6	-	1578	3	FSM	ENSG00000283064.1	ENST00000635439.1	1578	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTAGCTGGGATTAAA	NA	False	NA	NA	False	NA	NA	NA	26172802	26160764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26161206_26163307_26163677_26172034
transcript_117867.known	chr6	-	403	1	FSM	ENSG00000277157.2	ENST00000614247.2	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTCAGGAGAAAGAGTA	-2	True	NA	NA	False	NA	NA	NA	26189112	26188709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26188700_26189100
transcript_117868.known	chr6	-	948	2	FSM	ENSG00000282988.2	ENST00000635200.1	948	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCGTAAACTGGAACC	-8	True	NA	NA	False	TATAAA	-18	NA	26199293	26196753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26197267_26198858
transcript_117869.known	chr6	-	503	1	FSM	ENSG00000197409.8	ENST00000356476.3	503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCTATAAAAGTTGCT	-4	True	NA	NA	False	NA	NA	NA	26197286	26196783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26196800_26197300
transcript_117870.known	chr6	-	510	1	FSM	ENSG00000196866.3	ENST00000341023.2	510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCCTTAAAAGGGCTC	-8	True	NA	NA	False	NA	NA	NA	26199293	26198783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26198800_26199300
transcript_117871.known	chr6	-	1637	3	FSM	ENSG00000282988.2	ENST00000635641.1	1637	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCACGGCATGTACAGT	-8	True	NA	NA	False	NA	NA	NA	26199293	26195594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26196247_26196719_26197270_26198858
transcript_117872.known	chr6	+	1196	1	FSM	ENSG00000277224.3	ENST00000356530.6	473	1	4	-727	4	727	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAAAGATACTGAAGTT	2	True	NA	NA	False	AATACA	-23	NA	26199519	26200715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26199500_26200700
transcript_117873.known	chr6	+	1487	1	FSM	ENSG00000276966.3	ENST00000615164.3	412	1	-58	-1017	-58	1017	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATCTCATTGTCTATT	5034	False	NA	11	True	AATAAA	-18	NA	26204551	26206038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26204600_26206000
transcript_117874.known	chr6	-	1534	1	FSM	ENSG00000273802.3	ENST00000541790.4	489	1	-4	-1041	-4	1041	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACAGTTTTGGCTGGCTG	-7	True	NA	NA	False	CATAAA	-28	NA	26216692	26215158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26215200_26216700
transcript_117875.known	chr6	+	509	1	FSM	ENSG00000277075.2	ENST00000303910.4	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCACTGTCCTAATTT	38	False	NA	10	True	AATACA	-21	NA	26216974	26217483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26217000_26217500
transcript_117878.known	chr6	+	482	1	FSM	ENSG00000274750.3	ENST00000614911.3	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCCGTGAAAAGGGCT	-4	True	NA	NA	False	NA	NA	NA	26225134	26225616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26225100_26225600
transcript_117879.known	chr6	+	2679	2	FSM	ENSG00000274750.3	ENST00000634733.1	2679	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACATTGAGTGCATTCC	-22	True	NA	NA	False	AATAAA	-17	NA	26224198	26227473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26224306_26224901
transcript_117880.known	chr6	+	401	1	FSM	ENSG00000274618.2	ENST00000244537.6	401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCTTCGTCACACGAAG	0	True	NA	NA	False	CATAAA	-18	NA	26240392	26240793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26240400_26240800
transcript_117881.known	chr6	-	494	1	FSM	ENSG00000277775.2	ENST00000618052.2	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTTCAGTTGAAAGCG	0	True	NA	0	True	NA	NA	NA	26250635	26250141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26250100_26250600
transcript_117882.known	chr6	+	2060	1	FSM	ENSG00000275713.3	ENST00000619466.3	462	1	37	-1635	37	1635	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGTGAGTTAGTATT	37	False	NA	16	True	AATAAA	-17	NA	26251650	26253710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26251600_26253700
transcript_117883.known	chr6	+	482	1	FSM	ENSG00000278588.2	ENST00000377733.4	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTCATTTAAAGATCTG	-5	True	NA	NA	False	NA	NA	NA	26272930	26273412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26272900_26273400
transcript_117885.known	chr6	-	1034	2	FSM	ENSG00000158406.6	ENST00000634560.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTCCAATGGCTCT	-1	True	NA	-11	True	AATAAA	-31	NA	26285534	26281054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26281588_26285033
transcript_117886.known	chr6	-	409	1	FSM	ENSG00000158406.6	ENST00000377727.2	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTCATAAAAGAGCAG	-1	True	NA	NA	False	NA	NA	NA	26285534	26285125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26285100_26285500
transcript_117888.known	chr6	+	3776	11	FSM	ENSG00000186470.14	ENST00000377708.7	3776	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.93428015022424	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAACTTGGTTTTTTC	3	True	NA	13	True	AATAAA	-18	NA	26365197	26378312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26365353_26367989_26368051_26368177_26368268_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
transcript_117890.known	chr6	+	3733	10	FSM	ENSG00000186470.14	ENST00000508906.6	3733	10	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_9	2.44948974278318	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTTCTAGACTGT	NA	False	NA	21	True	AATAAA	-26	NA	26365158	26378320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26365353_26367989_26368051_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
transcript_117892.known	chr6	+	3583	8	FSM	ENSG00000124508.17	ENST00000356709.9	3583	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.74278606921194	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	-12	True	NA	6	True	AATAAA	-16	NA	26383107	26394874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_117895.known	chr6	+	1790	8	FSM	ENSG00000124508.17	ENST00000469230.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	15.8873585993804	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	-24	True	NA	6	True	AATAAA	-16	NA	26383095	26394874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26394297
transcript_117900.known	chr6	+	1068	6	FSM	ENSG00000124508.17	ENST00000482536.5	1068	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.5735036007657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTCAGCAGCCACCGC	6	True	NA	NA	False	NA	NA	NA	26383125	26393007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383182_26383791_26383916_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_117904.nic	chr6	+	1478	5	ISM	ENSG00000124508.17	ENST00000356709.9	3583	8	-14	4234	-2	-268	5prime_fragment	FALSE	canonical	3	30	junction_1	6.87386354243376	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTCTGTTGAAGACATG	-26	True	NA	4	True	AATACA	-17	NA	26383093	26390640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004
transcript_117906.known	chr6	+	3241	7	FSM	ENSG00000124508.17	ENST00000352867.6	3241	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	11.0867789130417	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	-18	True	NA	6	True	AATAAA	-16	NA	26383101	26394874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383182_26383791_26383916_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_117910.nic	chr6	+	1682	5	ISM	ENSG00000124508.17	ENST00000469230.5	1790	8	0	4146	0	-180	intron_retention	FALSE	canonical	3	18	junction_1	11.71537451386	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCCGTGTACAATTTGT	-24	True	NA	92	True	NA	NA	NA	26383095	26390728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004
transcript_117915.known	chr6	+	1390	4	FSM	ENSG00000124508.17	ENST00000467485.5	1390	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	14.3372087784044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGCCCAGGGCTACACA	-18	True	NA	NA	False	NA	NA	NA	26383101	26390908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383182_26383791_26383916_26388012_26388295_26390004
transcript_117922.known	chr6	+	2733	8	FSM	ENSG00000124508.17	ENST00000416795.6	2733	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.1363621449748	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTAACTTTTTCCAG	6	True	NA	12	True	AATAAA	-17	NA	26383207	26393992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383314_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_117925.known	chr6	+	2483	7	FSM	ENSG00000124549.15	ENST00000465856.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.49443825784929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGTGCAT	NA	False	NA	NA	False	NA	NA	NA	26421390	26430588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26421625_26422088_26422198_26422932_26423760_26426241_26426524_26427870_26428108_26428642_26428786_26429937
transcript_117926.nic	chr6	+	594	2	ISM	ENSG00000124549.15	ENST00000465856.5	2483	7	6	8134	4	-5577	5prime_fragment	FALSE	canonical	2	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTACTATATTTTGTT	0	True	NA	NA	False	AATAAA	-1	NA	26421396	26422454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_26421625_26422088
transcript_117928.known	chr6	+	2890	8	FSM	ENSG00000112763.17	ENST00000312541.10	2890	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	10.5964953775158	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	-7	True	NA	9	True	AATAAA	-18	NA	26457954	26469637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_117930.known	chr6	+	1687	8	FSM	ENSG00000112763.17	ENST00000469185.5	1687	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	16.8074327581094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTTGACTCTTTTTG	6	True	NA	11	True	AATAAA	-17	NA	26457967	26476621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26476121
transcript_117935.known	chr6	+	3024	9	FSM	ENSG00000112763.17	ENST00000377600.7	3024	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	15.8350876221131	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	NA	False	NA	9	True	AATAAA	-18	NA	26457921	26469637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26462796_26462898_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_117937.known	chr6	+	2845	7	FSM	ENSG00000112763.17	ENST00000541522.5	2845	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.8002976164114	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGATCTAATGTGTGGCT	NA	False	NA	25	True	AATAAA	-34	NA	26457903	26469653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26458143_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_117938.nnic	chr6	+	540	2	NNC	ENSG00000112763.17	novel	687	4	NA	NA	9092	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTTGACTCTTTTTGT	-16	True	NA	12	True	AATAAA	-18	NA	26474318	26476622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26474397_26476160
transcript_117939.known	chr6	+	3113	8	FSM	ENSG00000112763.17	ENST00000429381.5	3113	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	14.6816559150582	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	-1	True	NA	9	True	AATAAA	-18	NA	26457960	26469637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467718
transcript_117940.known	chr6	+	2945	8	FSM	ENSG00000124557.14	ENST00000684113.1	2945	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.832993127835043	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACCTCTTAACCTTTCTT	-2	True	NA	6	True	AATAAA	-23	NA	26500302	26510425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26500359_26501229_26501366_26501589_26501938_26504924_26505207_26506682_26506833_26507949_26507971_26508060_26508088_26508500
transcript_117941.known	chr6	+	5696	1	FSM	ENSG00000228223.3	ENST00000411553.3	5696	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCTTTTCTTTCTATA	NA	False	NA	43	True	AATAAA	-44	NA	26521708	26527404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26521700_26527400
transcript_117942.known	chr6	+	1943	2	FSM	ENSG00000182952.5	ENST00000377575.3	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	0	1108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTTCTTGTTAATA	-13	True	NA	NA	False	AATAAA	-18	NA	26538365	26546933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26538502_26545126
transcript_117944.known	chr6	+	2943	3	FSM	ENSG00000146109.5	ENST00000274849.3	2943	3	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	1	1545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATTTGCCTCTTAATAT	-4	True	NA	11	True	ATTAAA	-20	NA	26596952	26600739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26597224_26597913_26598111_26598264
transcript_117947.known	chr6	-	572	5	FSM	ENSG00000181315.11	ENST00000461899.1	572	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	69.2621830438516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTTCTTATCAAGAAAA	57	False	NA	NA	False	NA	NA	NA	26659689	26638639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26658776_26658852_26659440
transcript_117948.known	chr6	-	4811	4	FSM	ENSG00000181315.11	ENST00000415922.7	4811	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	9.10433352249844	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTCCACTGTACTG	0	True	NA	0	True	AATAAA	-22	NA	26659746	26634382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26659440
transcript_117949.known	chr6	-	587	3	FSM	ENSG00000181315.11	ENST00000480036.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	73	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTTATTCATATGCA	61	False	NA	NA	False	AATATA	-26	NA	26659685	26638475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26638729_26658557_26658647_26659440
transcript_11795.known	chr1	-	729	1	FSM	ENSG00000273365.1	ENST00000608512.1	729	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTTTTTCTATGACT	NA	False	NA	NA	False	ATTAAA	-14	NA	165707284	165706555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165706600_165707300
transcript_117950.known	chr6	-	467	3	FSM	ENSG00000181315.11	ENST00000465674.5	467	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	73.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGACTGTGAGGGC	11	False	NA	NA	False	NA	NA	NA	26659735	26638626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26638729_26643658_26643729_26659440
transcript_117953.nnic	chr6	-	785	4	Antisense	novelGene_ENSG00000261584.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_3	1.69967317119759	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGATTGTGTGTGTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	26687245	26673035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_26673247_26673884_26674072_26683010_26683131_26686978
transcript_117965.nnic	chr6	-	1743	6	NIC	ENSG00000241549.8	novel	1203	9	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_5	17.0880074906351	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGGTCTTCAAAGAC	308	False	NA	NA	False	NA	NA	NA	26956612	26877920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_26878836_26883342_26883518_26885358_26885444_26889009_26889198_26925119_26925276_26956388
transcript_11798.known	chr1	-	1912	7	FSM	ENSG00000143183.18	ENST00000367881.11	1912	7	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_4	38.9358446678636	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAGAGTTGAATTATTA	7	True	NA	NA	False	AATAAA	-22	NA	165768868	165726794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
transcript_117984.known	chr6	+	985	4	FSM	ENSG00000224843.8	ENST00000668297.1	985	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.94392028877595	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTATGCAATAATTGT	NA	False	NA	24	True	AATAAA	-36	NA	27019898	27023943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020055_27020164_27020656_27023253_27023398_27023749
transcript_117988.known	chr6	+	903	3	FSM	ENSG00000224843.8	ENST00000662403.1	903	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTTGAAGATAGT	NA	False	NA	6	True	AATAAA	-18	NA	27020072	27023925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020656_27023253_27023398_27023749
transcript_117989.known	chr6	+	1062	3	FSM	ENSG00000224843.8	ENST00000666341.1	1062	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGATAGTTTGTTA	NA	False	NA	12	True	AATAAA	-24	NA	27019904	27023931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020656_27023253_27023398_27023764
transcript_11799.known	chr1	-	1100	7	FSM	ENSG00000143183.18	ENST00000464650.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	210.471494506976	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATCTGTTTCATTTT	-1	True	NA	-4	True	AATAAA	-32	NA	165768876	165727537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768758
transcript_117992.known	chr6	+	969	3	FSM	ENSG00000224843.8	ENST00000606878.2	969	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTGAGCTTTGAAGATA	641	False	NA	4	True	AATAAA	-16	NA	26956994	27023923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26957184_26968457_26968523_27023208
transcript_117993.known	chr6	+	1418	2	FSM	ENSG00000224843.8	ENST00000664092.1	1418	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTTTGTTGAACTGT	NA	False	NA	55	True	NA	NA	NA	27019958	27023974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020656_27023253
transcript_117994.known	chr6	+	684	4	FSM	ENSG00000224843.8	ENST00000661007.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTGAGCTTTGAAGATA	NA	False	NA	4	True	AATAAA	-16	NA	27020350	27023923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020607_27020702_27020768_27023208_27023398_27023749
transcript_117995.known	chr6	+	495	4	FSM	ENSG00000224843.8	ENST00000424968.6	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTTGAAGATAGT	NA	False	NA	6	True	AATAAA	-18	NA	27020324	27023925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020415_27020555_27020656_27023253_27023398_27023764
transcript_117996.known	chr6	+	999	3	FSM	ENSG00000224843.8	ENST00000652085.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGATAGTTTGTTA	NA	False	NA	12	True	AATAAA	-24	NA	27020350	27023931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020607_27020702_27020768_27023253
transcript_117998.nnic	chr6	-	976	3	NNC	ENSG00000124635.9	novel	950	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	3.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGTTGCCAACTGGAA	-2	True	NA	-17	True	AATAAA	-24	NA	27132796	27125896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_27126463_27127263_27127402_27132524
transcript_11800.known	chr1	+	4838	8	FSM	ENSG00000143179.16	ENST00000642653.1	4838	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	213.486318445153	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAAGGCTCTCGCCTTC	-5	True	NA	6	True	AATAAA	-6	NA	165827804	165911608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165827933_165885141_165885380_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_118000.nnic	chr6	-	794	3	NNC	ENSG00000124635.9	novel	408	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	3.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-2	True	NA	NA	False	TATAAA	-15	NA	27132796	27126078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_27126463_27127263_27127402_27132524
transcript_118001.known	chr6	-	408	2	FSM	ENSG00000124635.9	ENST00000606923.1	408	2	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	6027	False	NA	NA	False	TATAAA	-15	NA	27132548	27126078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27126463_27132524
transcript_118002.known	chr6	-	950	2	FSM	ENSG00000124635.9	ENST00000607124.1	950	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGTTGCCAACTGGAA	5825	False	NA	-17	True	AATAAA	-24	NA	27132750	27125896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27126463_27132366
transcript_118004.known	chr6	-	480	1	FSM	ENSG00000124635.9	ENST00000339812.3	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTCAAAGAAAGAGCTG	-1	True	NA	NA	False	NA	NA	NA	27132795	27132315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27132300_27132800
transcript_118005.known	chr6	+	2250	1	FSM	ENSG00000196787.4	ENST00000359193.4	493	1	-1	-1756	-1	1756	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAGGTTAAGTTTTTAA	0	True	NA	7	True	AATAAA	-18	NA	27133041	27135291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27133000_27135300
transcript_118006.nnic	chr6	-	543	3	Antisense	novelGene_ENSG00000276180.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	-12	True	NA	-4	True	AATAAA	-21	NA	27146058	27138292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_27138682_27145813_27145925_27146015
transcript_118008.nnic	chr6	-	641	2	Antisense	novelGene_ENSG00000276180.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	1458	False	NA	-4	True	AATAAA	-21	NA	27146065	27138292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_27138682_27145813
transcript_118010.known	chr6	-	495	1	FSM	ENSG00000197903.8	ENST00000356950.2	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCGATATTAGAGCTG	-3	True	NA	-4	True	NA	NA	NA	27146855	27146360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27146400_27146900
transcript_118011.known	chr6	+	457	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACACTGTCTTAGAGAA	0	True	NA	NA	False	AAAACA	-20	NA	27147105	27147562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27147100_27147600
transcript_118013.nic	chr6	+	2069	6	ISM	ENSG00000112812.16	ENST00000230582.8	2887	12	3461	167	-32	0	3prime_fragment	FALSE	canonical	3	31	junction_1	35.2102257874044	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	122	False	NA	19	True	AATAAA	-16	NA	27251161	27256453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_118015.known	chr6	+	955	5	FSM	ENSG00000112812.16	ENST00000488649.5	955	5	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	32.6534837345114	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCTTTTTCTGGACT	-17	True	NA	NA	False	GGGGCT	-7	NA	27251193	27255662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251265_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_118020.known	chr6	+	910	5	FSM	ENSG00000112812.16	ENST00000481125.5	910	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	45.5926255001837	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGGATGATTATTCT	-9	True	NA	16	True	NA	NA	NA	27251201	27255514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254985_27255132_27255246
transcript_118023.known	chr6	+	996	5	FSM	ENSG00000112812.16	ENST00000484493.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	46.1268631060036	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGTGACTTATGCTGG	88	False	NA	73	True	NA	NA	NA	27251298	27255571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251502_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_118025.known	chr6	+	962	5	FSM	ENSG00000112812.16	ENST00000468138.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	26.0480325552622	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCCTTTCCACTCCCTG	94	False	NA	NA	False	NA	NA	NA	27251619	27255319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_118028.known	chr6	+	1002	4	FSM	ENSG00000112812.16	ENST00000492575.5	1002	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	49.3783578323765	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTGCTCTGCCATG	2	True	NA	NA	False	NA	NA	NA	27251212	27255908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251265_27252807_27252950_27254985_27255132_27255246
transcript_11803.known	chr1	+	4801	7	FSM	ENSG00000143179.16	ENST00000367879.9	4801	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	39.2743201369829	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCCTTCTGTGTGATGC	15	True	NA	16	True	AATAAA	-16	NA	165827613	165911618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165827933_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_118033.known	chr6	+	568	4	FSM	ENSG00000112812.16	ENST00000459736.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	57.6020832956587	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGTCCTGGACATACT	111	False	NA	NA	False	NA	NA	NA	27251321	27255346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251502_27252807_27252950_27254985_27255132_27255246
transcript_118036.known	chr6	+	840	4	FSM	ENSG00000112812.16	ENST00000471463.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	55.5357742560795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCAGCTTGTTTTGAA	136	False	NA	NA	False	NA	NA	NA	27251661	27255381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27252041_27254692_27254873_27254985_27255132_27255246
transcript_118038.known	chr6	+	914	3	FSM	ENSG00000112812.16	ENST00000495683.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	67.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTCTGTCTATTTCTC	31	False	NA	NA	False	NA	NA	NA	27251070	27255820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251265_27254985_27255132_27255246
transcript_118040.known	chr6	+	1809	3	FSM	ENSG00000112812.16	ENST00000377456.6	1809	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	68.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	62	False	NA	22	True	AATAAA	-19	NA	27251587	27256456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27252041_27254985_27255132_27255246
transcript_118045.nnic	chr6	-	2817	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	-25	1372	-25	8	multi-exon	FALSE	canonical	3	77	junction_4	42.6695148788922	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	NA	False	NA	-13	True	AATAAA	-14	NA	27375302	27357822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
transcript_118047.nnic	chr6	-	879	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	-93	3378	-93	-1577	multi-exon	FALSE	canonical	3	77	junction_4	42.6695148788922	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTAAATATAGTGAATG	NA	False	NA	NA	False	AAGAAA	-21	NA	27375370	27359828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
transcript_118053.nnic	chr6	-	2625	3	FSM	ENSG00000204789.5	ENST00000690588.1	2586	3	-31	-8	-18	8	multi-exon	FALSE	canonical	3	7	junction_2	81	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	NA	False	NA	-13	True	AATAAA	-14	NA	27375295	27357822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27360222_27363178_27363303_27375193
transcript_118055.known	chr6	-	2397	1	FSM	ENSG00000204789.5	ENST00000416749.2	1603	1	-367	-427	-367	6	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGTGTCATGTAGCTG	NA	False	NA	-15	True	AATAAA	-12	NA	27360221	27357824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27357800_27360200
transcript_118056.nnic	chr6	-	1358	5	FSM	ENSG00000204789.5	ENST00000687798.1	4696	5	26	3312	26	-1577	multi-exon	FALSE	canonical	3	55	junction_4	51.060625730596	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTAAATATAGTGAATG	30	True	NA	NA	False	AAGAAA	-21	NA	27375205	27359828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27374549
transcript_118058.known	chr6	+	749	4	FSM	ENSG00000124613.9	ENST00000461521.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	25.152865973218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCCTTTTGAATGCAA	9	True	NA	NA	False	NA	NA	NA	27388991	27400769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27389076_27395016_27395096_27399441_27399551_27400292
transcript_118062.known	chr6	+	4042	3	FSM	ENSG00000124613.9	ENST00000244576.9	4042	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	16.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCCTATAGCTTTTTA	-5	True	NA	25	True	AATAAA	-29	NA	27388758	27403908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27389076_27399441_27399551_27400292
transcript_118065.nnic	chr6	+	804	2	NNC	ENSG00000124613.9	novel	325	2	NA	NA	-72	-1227	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGGGTGTATTGACAG	NA	False	NA	NA	False	AATAAA	-17	NA	27388686	27389905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_27389076_27389490
transcript_118066.known	chr6	+	325	2	FSM	ENSG00000124613.9	ENST00000482767.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGTCCATTGTCATT	58	False	NA	7	True	CATAAA	-21	NA	27388903	27391132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27389076_27390979
transcript_118067.known	chr6	-	2899	6	FSM	ENSG00000096654.16	ENST00000377419.1	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	21.3297913726318	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATTAACAATTCAA	7302	False	NA	-13	True	AATAAA	-16	NA	27472681	27450819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472660
transcript_118068.known	chr6	-	3328	6	FSM	ENSG00000096654.16	ENST00000683788.1	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	11.0995495404093	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTCTGTTTTTAATAT	-10	True	NA	-4	True	ATTAAA	-18	NA	27473105	27450746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472728
transcript_118069.known	chr6	-	3101	6	FSM	ENSG00000096654.16	ENST00000211936.10	3101	6	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	25.1348363829964	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTTTTAATATTCTA	-23	True	NA	0	True	ATTAAA	-22	NA	27473118	27450742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472972
transcript_11809.known	chr1	+	473	3	FSM	ENSG00000229588.3	ENST00000653824.2	2342	3	59	1810	59	-1810	multi-exon	FALSE	canonical	0	0	junction_1	3.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTCTCTGGTTCTTCT	34	False	NA	NA	False	ATTAAA	-17	NA	166165910	166339090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_166166055_166335327_166335466_166338899
transcript_118095.known	chr6	+	728	4	FSM	ENSG00000281706.4	ENST00000662411.2	1496	4	414	354	356	63	multi-exon	FALSE	canonical	0	0	junction_2	4.92160768674447	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGCAGGTGCCTCTTTT	334	False	NA	77	True	NA	NA	NA	27694440	27713352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27694507_27702313_27702418_27710680_27710890_27713003
transcript_118098.known	chr6	+	834	2	FSM	ENSG00000281706.4	ENST00000625477.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCCCCTGTAGTCCCAG	16	True	NA	NA	False	AATACA	-23	NA	27694072	27702713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27694507_27702313
transcript_118105.nnic	chr6	+	1291	4	NIC	ENSG00000287252.2	novel	1223	4	NA	NA	-69	-4	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	2.94392028877595	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGGTTATATGCCATC	NA	False	NA	84	True	AATAAA	-20	NA	27757375	27763265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_27757742_27761724_27761842_27762301_27762364_27762519
transcript_118112.known	chr6	-	488	1	FSM	ENSG00000185130.6	ENST00000377401.4	451	1	-2	-35	-2	35	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGGGGCGAGGGGTC	-5	True	NA	-54	True	NA	NA	NA	27807931	27807443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27807400_27807900
transcript_118113.known	chr6	+	503	1	FSM	ENSG00000196747.5	ENST00000358739.5	495	1	26	-34	26	34	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTCGTCTTTGCCT	26	False	NA	44	True	NA	NA	NA	27808198	27808701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27808200_27808700
transcript_118114.known	chr6	+	1237	1	FSM	ENSG00000278828.2	ENST00000369163.4	1250	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTTTCACCCTAGAA	14	False	NA	3	True	AATAAA	-18	NA	27810063	27811300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27810100_27811300
transcript_118115.known	chr6	-	476	1	FSM	ENSG00000276368.2	ENST00000333151.5	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATCATAAAAAGATGACA	0	True	NA	1	True	CATAAA	-29	NA	27814777	27814301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27814300_27814800
transcript_118116.known	chr6	+	389	1	FSM	ENSG00000197238.5	ENST00000355057.3	389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4936	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAGCTGAAGAGTGG	0	True	NA	23	True	AATAAA	-24	NA	27824091	27824480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27824100_27824500
transcript_118117.known	chr6	-	387	1	FSM	ENSG00000273542.2	ENST00000611927.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	634	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCAGCTGAGGAGCCG	14	True	NA	NA	False	NA	NA	NA	27831560	27831173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27831200_27831600
transcript_118118.known	chr6	+	4137	3	FSM	ENSG00000233822.6	ENST00000606613.1	4137	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTGGACAAATTCTCT	-4	True	NA	NA	False	AATAAA	-15	NA	27838600	27855709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27839039_27841563_27841662_27852108
transcript_118120.known	chr6	+	715	3	FSM	ENSG00000233822.6	ENST00000449538.3	715	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCACTCTTTTTATTTTA	-15	True	NA	NA	False	ATTAAA	-36	NA	27838544	27852204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27839066_27841563_27841662_27852108
transcript_118121.known	chr6	+	482	1	FSM	ENSG00000276903.2	ENST00000613174.2	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGCGGGAGAGCTG	-1	True	NA	NA	False	AATACA	-24	NA	27865316	27865798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27865300_27865800
transcript_118122.known	chr6	-	797	1	FSM	ENSG00000184357.5	ENST00000331442.5	797	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACCTCTAAAAAATGGCT	0	True	NA	NA	False	NA	NA	NA	27867588	27866791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27866800_27867600
transcript_118123.known	chr6	-	502	1	FSM	ENSG00000275379.2	ENST00000616365.2	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCACCAAAAGGAAGCT	-2	True	NA	NA	False	NA	NA	NA	27872346	27871844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27871800_27872300
transcript_118124.known	chr6	-	387	1	FSM	ENSG00000275126.2	ENST00000618305.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCTGTGAAAGAGCTG	-2	True	NA	NA	False	NA	NA	NA	27873534	27873147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27873100_27873500
transcript_118125.known	chr6	-	512	1	FSM	ENSG00000197153.5	ENST00000359303.4	512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCACTGAGGATAGCT	0	True	NA	NA	False	NA	NA	NA	27890826	27890314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27890300_27890800
transcript_118126.known	chr6	-	487	1	FSM	ENSG00000278677.2	ENST00000359611.4	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTCTACGGAAGAACTG	1	True	NA	1	True	TTTAAA	-44	NA	27893185	27892698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27892700_27893200
transcript_118127.nnic	chr6	+	884	2	Genic_Genomic	ENSG00000274641.2_ENSG00000124657.1	novel	467	1	NA	NA	-3	140	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTACTTCTGTTGCCTTA	-4	True	NA	NA	False	AATAAA	-21	NA	27893421	27958322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_+_27893982_27957998
transcript_118128.known	chr6	+	467	1	FSM	ENSG00000274641.2	ENST00000616182.2	467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCCAGAGAAAGAGCCTG	-1	True	NA	NA	False	NA	NA	NA	27893424	27893891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27893400_27893900
transcript_11813.known	chr1	+	5751	6	FSM	ENSG00000143157.12	ENST00000367876.9	5751	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	39.2907113705008	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCATACCTTAGTTG	-22	True	NA	NA	False	AAAAAG	-21	NA	166839474	166856359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
transcript_118134.known	chr6	-	2163	3	FSM	ENSG00000269293.4	ENST00000600652.1	2163	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTATGATTGTTTTTGTG	365	False	NA	NA	False	AATAAA	-15	NA	28137293	28121794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28123212_28125622_28125820_28136744
transcript_118137.nnic	chr6	-	1009	2	NNC	ENSG00000269293.4	novel	1646	4	NA	NA	-1	29221	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTTAGTGGGAGATTTT	-12	True	NA	NA	False	AATAAA	-22	NA	28136845	28090560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_28091469_28136744
transcript_11814.nic	chr1	+	3045	5	ISM	ENSG00000143157.12	ENST00000367876.9	5751	6	-25	4892	3	2259	5prime_fragment	FALSE	canonical	3	164	junction_1	35.6957630538976	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACGGTGCGTATCTAGG	8	True	NA	NA	False	AAAAAG	-5	NA	166839449	166851467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937
transcript_118140.known	chr6	-	821	1	FSM	ENSG00000269293.4	ENST00000671586.1	821	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCTTCTCCTGTATCAT	-11	True	NA	NA	False	AATAAA	-34	NA	28136844	28136023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28136000_28136800
transcript_118141.known	chr6	-	1536	2	FSM	ENSG00000269293.4	ENST00000602810.2	1983	2	447	0	-19	0	multi-exon	FALSE	canonical	3	68	junction_1	0	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGTATGATTGTTTTT	792	False	NA	NA	False	AATAAA	-12	NA	28136866	28121797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28123212_28136744
transcript_118142.known	chr6	+	1954	4	FSM	ENSG00000197279.5	ENST00000683778.1	1954	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	11.9536140513607	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTTCTGGTGTTCAA	-3	True	NA	18	True	AATAAA	-33	NA	28080567	28089563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28080971_28085480_28085892_28086171_28086311_28088562
transcript_118145.known	chr6	-	686	2	FSM	ENSG00000272009.1	ENST00000605945.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCCTTAAAGTGTGAAC	NA	False	NA	-7	True	ATTAAA	-25	NA	28081130	28078791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28078973_28080625
transcript_118147.nnic	chr6	-	843	3	NNC	ENSG00000269293.4	novel	2163	3	NA	NA	0	3945	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	34	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACACTGATAGGGTTTTAT	-11	True	NA	NA	False	AATAAA	-18	NA	28136844	28115836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_28116452_28123083_28123212_28136744
transcript_118152.nnic	chr6	+	1402	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-68	-3	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_3	31.4783876475414	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	NA	False	NA	16	True	ATTAAA	-16	NA	28124540	28130079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28129371
transcript_118153.known	chr6	+	1279	4	FSM	ENSG00000196812.6	ENST00000340487.5	1279	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	28.2410261066335	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	-7	True	NA	19	True	ATTAAA	-19	NA	28124608	28130082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28124678_28125412_28125831_28126782_28126922_28129429
transcript_118154.nnic	chr6	+	1437	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-53	-3	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	46.9491450638052	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	NA	False	NA	16	True	ATTAAA	-16	NA	28124555	28130079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28124678_28125362_28125831_28126782_28126922_28129371
transcript_118155.nnic	chr6	+	1382	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	46.3057471835	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	NA	False	NA	19	True	ATTAAA	-19	NA	28124555	28130082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28124678_28125362_28125831_28126782_28126922_28129429
transcript_118158.nnic	chr6	-	848	2	FSM	ENSG00000269293.4	ENST00000602810.2	1983	2	-74	1209	-74	-1209	multi-exon	FALSE	canonical	3	68	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGGCTGCTATGTTA	271	False	NA	-3	True	ATTAAA	-18	NA	28137387	28123006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28123212_28136744
transcript_118161.known	chr6	+	7419	6	FSM	ENSG00000198315.11	ENST00000330236.7	7419	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5.63560112144215	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGATTATTTGTGGT	10	True	NA	24	True	AATAAA	-15	NA	28141882	28159460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28142030_28148315_28148825_28149482_28149625_28151844_28151937_28152260_28152385_28153055
transcript_118165.known	chr6	+	1628	5	FSM	ENSG00000226314.9	ENST00000440790.6	1628	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.8613807855649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATATGTGTACTGTGGTT	3	True	NA	21	True	AATAAA	-36	NA	28161780	28169594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28161822_28162579_28162767_28164748_28164902_28166500_28167555_28169401
transcript_118167.nnic	chr6	+	601	4	NIC	ENSG00000226314.9	novel	1628	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATCAGGATATGTGTACT	NA	False	NA	15	True	AATAAA	-30	NA	28161747	28169588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_28161822_28162579_28162767_28164748_28164902_28169401
transcript_118169.nnic	chr6	+	448	3	NIC	ENSG00000226314.9	novel	1628	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGATCAGGATATGTGTACT	NA	False	NA	15	True	AATAAA	-30	NA	28161747	28169588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_28161822_28162579_28162767_28169401
transcript_11817.known	chr1	-	2096	8	FSM	ENSG00000152382.6	ENST00000367874.5	2096	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	56.9496734505339	654	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	-13	True	NA	-3	True	AATAAA	-16	NA	166876264	166856509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
transcript_118172.known	chr6	+	1791	5	FSM	ENSG00000137185.13	ENST00000425468.6	1791	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.5604951616792	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGCCAACATGCCTGAA	-9	True	NA	8	True	AATAAA	-9	NA	28225274	28233466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28225367_28227011_28227505_28227689_28227838_28230335_28230489_28232561
transcript_118174.known	chr6	+	1601	4	FSM	ENSG00000137185.13	ENST00000531979.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	14.1970262926979	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTTGGTATCTGTG	8	True	NA	24	True	AATAAA	-25	NA	28225291	28233482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28225331_28227011_28227505_28227689_28227838_28232561
transcript_118175.known	chr6	+	1659	4	FSM	ENSG00000137185.13	ENST00000252207.10	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	12.0277457017791	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTATCTGTGTTTAA	-9	True	NA	29	True	AATAAA	-30	NA	28225274	28233487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28225367_28227011_28227505_28227689_28227838_28232561
transcript_118178.nic	chr6	+	2121	3	ISM	ENSG00000137185.13	ENST00000531979.5	1601	4	-48	4252	-20	0	5prime_fragment	FALSE	canonical	3	9	junction_1	16.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAAAATTGCTTCTG	4505	False	NA	41	True	AGTAAA	-37	NA	28225243	28229230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_28225331_28227011_28227505_28227689
transcript_118180.known	chr6	+	2062	3	FSM	ENSG00000137185.13	ENST00000527436.5	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	12.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAAAATTGCTTCTG	55	False	NA	41	True	AGTAAA	-37	NA	28225338	28229230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28225367_28227011_28227505_28227689
transcript_118181.nnic	chr6	+	1007	2	NIC	ENSG00000137185.13	novel	1659	4	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCTGAAAGATTTGGTA	-9	True	NA	18	True	AATAAA	-19	NA	28225274	28233476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_28225367_28232561
transcript_118182.known	chr6	+	2171	4	FSM	ENSG00000137185.13	ENST00000647743.1	2171	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	8.01387685344754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAACATGCCTGAAAGAT	15	True	NA	12	True	AATAAA	-13	NA	28225298	28233470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28225367_28227011_28227505_28227664_28228366_28232561
transcript_118183.known	chr6	-	5346	5	FSM	ENSG00000187626.9	ENST00000377294.3	5346	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	5.40832691319598	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGACAGTATTGGTCT	-9	True	NA	NA	False	AATAAA	-27	NA	28252269	28241696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251557
transcript_118188.known	chr6	+	3080	7	FSM	ENSG00000137338.6	ENST00000682144.1	3080	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	9.28559218478941	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	-13	True	NA	7	True	NA	NA	NA	28281571	28302549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28281919_28283775_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_118191.known	chr6	+	3100	7	FSM	ENSG00000137338.6	ENST00000259883.3	3100	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	15.9478316185409	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	-13	True	NA	7	True	NA	NA	NA	28281571	28302549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28281919_28283755_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_118199.known	chr6	+	2362	4	FSM	ENSG00000197062.12	ENST00000316606.10	2362	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	11.7756811551038	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	6	True	NA	11	True	AATAAA	-11	NA	28267057	28278201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267214_28271853_28271935_28272669_28272788_28276194
transcript_118202.known	chr6	+	1998	4	FSM	ENSG00000197062.12	ENST00000623276.3	1998	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	22.3954360429878	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	8	True	NA	4	True	AATAAA	-19	NA	28267152	28277530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267214_28271853_28272337_28272669_28272788_28276194
transcript_118204.known	chr6	+	2321	4	FSM	ENSG00000197062.12	ENST00000614088.1	2321	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	17.4610678049451	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTTTGTGGAAGATAA	-5	True	NA	31	True	AATAAA	-31	NA	28267358	28278221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267454_28271853_28271935_28272669_28272788_28276194
transcript_118206.known	chr6	+	2729	4	FSM	ENSG00000197062.12	ENST00000619937.4	2729	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.131126469709	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTGGAAGATAATTT	-5	True	NA	34	True	AATAAA	-34	NA	28267358	28278224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267454_28271853_28272340_28272669_28272788_28276194
transcript_11821.known	chr1	-	13360	10	FSM	ENSG00000143195.13	ENST00000271417.8	13360	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTATGGTATTTTTG	-16	True	NA	NA	False	AATAAA	-19	NA	166975540	166908186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_166919391_166920706_166921380_166922592_166922810_166927066_166927181_166935300_166935478_166936590_166936738_166939513_166939571_166956732_166956853_166957768_166958102_166975222
transcript_118211.known	chr6	+	588	3	FSM	ENSG00000197062.12	ENST00000617168.4	588	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	21.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGGAGATGGCCCCTCTG	-2	True	NA	NA	False	AAGAAA	-14	NA	28267142	28272703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267214_28271853_28272337_28272669
transcript_118216.nnic	chr6	+	2195	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	14.3861044066836	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	-37	True	NA	6	True	AATAAA	-15	NA	28349909	28366746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28349965_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_118217.nnic	chr6	+	2197	6	NNC	ENSG00000189298.14	novel	4687	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	16.3633737352662	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	-23	True	NA	6	True	AATAAA	-15	NA	28349923	28366746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28350068_28359524_28359902_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_118218.known	chr6	+	4687	6	FSM	ENSG00000189298.14	ENST00000252211.7	4687	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.1424873893284	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGGATTCTTAAATT	0	True	NA	10	True	AATAAA	-17	NA	28349946	28369172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28350068_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_11822.known	chr1	+	1737	12	FSM	ENSG00000143194.13	ENST00000367872.9	1737	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.46586504514519	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTAATCTGTTTCTTC	2	True	NA	NA	False	AATAAA	-34	NA	166989279	167022214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_166989485_166989736_166989830_166991377_166991478_166992685_166992842_166994027_166994070_167004179_167004305_167005075_167005131_167005255_167005398_167016221_167016285_167017826_167017960_167021084_167021161_167021667
transcript_118223.known	chr6	+	1794	5	FSM	ENSG00000189298.14	ENST00000341464.9	1794	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.5928228816892	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	3	True	NA	6	True	AATAAA	-15	NA	28349949	28366746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28350068_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_11823.known	chr1	-	415	1	FSM	ENSG00000213068.3	ENST00000450126.1	415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTCTGCAATACTGTAA	20	False	NA	NA	False	NA	NA	NA	167162837	167162422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167162400_167162800
transcript_118230.known	chr6	-	799	4	FSM	ENSG00000235109.8	ENST00000453745.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.04155872120988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTTGTAAACGAGACAG	303	False	NA	NA	False	NA	NA	NA	28336198	28326735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329715_28336081
transcript_118231.known	chr6	-	3050	4	FSM	ENSG00000235109.8	ENST00000439158.5	3050	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	6.23609564462324	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	11	True	NA	0	True	AATAAA	-30	NA	28336134	28324736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28335829
transcript_118232.known	chr6	-	2812	4	FSM	ENSG00000235109.8	ENST00000344279.11	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.08248290463863	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-3	True	NA	0	True	AATAAA	-30	NA	28336148	28324736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28336081
transcript_118237.known	chr6	-	2562	3	FSM	ENSG00000235109.8	ENST00000446474.5	2562	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCTAAACCTTTGGC	11	True	NA	-12	True	AATAAA	-18	NA	28336134	28324748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28335829
transcript_118238.known	chr6	-	1005	3	FSM	ENSG00000235109.8	ENST00000435857.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCCAGCATCTCCG	126	False	NA	NA	False	NA	NA	NA	28336375	28326294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28336081
transcript_11824.known	chr1	-	682	1	FSM	ENSG00000272205.1	ENST00000606967.1	682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCGTGAATTTTATTT	1808	False	NA	-4	True	AATAAA	-17	NA	167220512	167219830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167219800_167220500
transcript_118242.known	chr6	-	7711	4	FSM	ENSG00000158691.15	ENST00000684592.1	7711	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.71547606649408	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAATATTTTTGTGTT	-1	True	NA	-9	True	TATAAA	-14	NA	28399747	28384737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28391743_28392901_28393047_28398003_28398474_28399656
transcript_118248.known	chr6	-	5495	5	FSM	ENSG00000158691.15	ENST00000361028.5	5495	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	13.9014387744578	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTTCTGTAAAAAGCT	12	True	NA	0	True	AATAAA	-21	NA	28399734	28378954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
transcript_118250.known	chr6	-	987	2	FSM	ENSG00000287804.2	ENST00000666335.1	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTATATTGCTTTTAT	1	True	NA	NA	False	TTTAAA	-15	NA	28489455	28476995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28477891_28489363
transcript_118252.nnic	chr6	-	443	2	FSM	ENSG00000287804.2	ENST00000689665.1	413	2	-30	0	-30	0	multi-exon	FALSE	canonical	3	35	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTCTTTCTGGGTG	476	False	NA	0	True	ATTAAA	-18	NA	28489523	28485428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28485712_28489363
transcript_118253.known	chr6	+	1348	2	FSM	ENSG00000286819.2	ENST00000661520.1	1348	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGATAGCAGAAGTAAATTA	300	False	NA	NA	False	NA	NA	NA	28489895	28491661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28489954_28490371
transcript_118254.known	chr6	-	343	2	FSM	ENSG00000232040.4	ENST00000526291.1	343	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTTGAAACTATACAGT	1311	False	NA	NA	False	TATAAA	-27	NA	28586524	28585205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28585322_28586297
transcript_118255.known	chr6	-	709	2	FSM	ENSG00000225173.2	ENST00000457253.2	1390	2	52	629	52	-629	multi-exon	FALSE	canonical	3	13	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACAGTGCTGGGATT	9	True	NA	NA	False	NA	NA	NA	28839006	28837868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28838321_28838749
transcript_118257.known	chr6	+	413	2	FSM	ENSG00000224157.1	ENST00000444986.1	413	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCTTAACTCTTGTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	28896529	28897322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28896731_28897110
transcript_118258.known	chr6	-	2963	8	FSM	ENSG00000204713.11	ENST00000377199.4	2963	8	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_4	29.2546873969605	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	-23	True	NA	-7	True	AATAAA	-18	NA	28923985	28903001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28904666_28907235_28907263_28908807_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
transcript_118260.known	chr6	+	466	2	FSM	ENSG00000204709.4	ENST00000377186.3	466	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTAGAGCCGTTGGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	28943876	28944537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28944027_28944221
transcript_11827.known	chr1	+	13937	17	FSM	ENSG00000143190.23	ENST00000541643.7	13937	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	16.4502089652381	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTTCTTTGAAATTG	11	True	NA	36	True	ATTAAA	-26	NA	167220897	167427345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167220959_167303473_167303575_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
transcript_118278.known	chr6	-	894	2	FSM	ENSG00000213886.4	ENST00000377050.5	894	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTACTGATTTCTGTA	-1	True	NA	86	True	NA	NA	NA	29559732	29555514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_29556351_29559674
transcript_118282.known	chr6	-	2082	5	FSM	ENSG00000204644.10	ENST00000376883.2	2082	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.54950975679639	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTTTGTGTTTAGT	-12	True	NA	-1	True	AATAAA	-17	NA	29681152	29672482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29676880_29677367_29681061
transcript_118284.nnic	chr6	+	568	3	Antisense	novelGene_ENSG00000233916.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTAGTAATGGTAATCT	NA	False	NA	NA	False	AATAAA	-14	NA	29685976	29710163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_29686178_29708439_29708512_29709868
transcript_118286.nnic	chr6	+	988	2	Antisense	novelGene_ENSG00000233916.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTGCTCTCAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	29685976	29709226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_29686178_29708439
transcript_118289.known	chr6	+	1283	7	FSM	ENSG00000204642.14	ENST00000334668.8	1283	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	4.61880215351701	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAGATATGTTTTTAT	NA	False	NA	15	True	AATAAA	-27	NA	29723339	29726525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
transcript_11829.known	chr1	+	13843	16	FSM	ENSG00000143190.23	ENST00000367866.7	13843	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	7.53539794717056	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGGAGTTTCTTTGA	-1	True	NA	31	True	ATTAAA	-21	NA	167220885	167427340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
transcript_1183.nic	chr1	+	2281	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	33	junction_1	23.9674779649424	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-20	True	NA	22	True	AATAAA	-24	NA	6579993	6589280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_6580071_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_118309.nnic	chr6	-	823	3	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	3	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	NA	False	NA	-1	True	ATTAAA	-17	NA	29749052	29726600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_29727140_29728364_29728496_29748899
transcript_118313.nnic	chr6	-	923	3	NNC	ENSG00000214922.9	novel	1905	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	NA	False	NA	-1	True	ATTAAA	-17	NA	29749052	29726600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_29727240_29728364_29728496_29748899
transcript_118318.nnic	chr6	-	953	3	NIC	ENSG00000273340.1	novel	1157	6	NA	NA	-95	408	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	3	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	NA	False	NA	1	True	NA	NA	NA	29749064	29741322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_29741856_29745472_29745728_29748899
transcript_118319.nnic	chr6	-	759	3	NIC	ENSG00000273340.1	novel	1157	6	NA	NA	-95	214	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	3	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGCGGTCATTGTATTA	NA	False	NA	-16	True	AATATA	-4	NA	29749064	29741516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_29741856_29745472_29745728_29748899
transcript_118320.nnic	chr6	-	696	2	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	0	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	NA	False	NA	-1	True	ATTAAA	-17	NA	29749056	29726600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_29727140_29748899
transcript_118321.nnic	chr6	-	796	2	NNC	ENSG00000214922.9	novel	1905	6	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	NA	False	NA	-1	True	ATTAAA	-17	NA	29749056	29726600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_29727240_29748899
transcript_118324.known	chr6	+	1480	7	FSM	ENSG00000204642.14	ENST00000259951.12	1480	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.84042232422605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGTCCTTTTATGTTC	-2	True	NA	NA	False	AATAAA	-17	NA	29723433	29727296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726882
transcript_118328.known	chr6	+	1319	7	FSM	ENSG00000204632.13	ENST00000360323.11	1319	7	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	5.7373048260195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTTCAAATTATTT	0	True	NA	-92	True	ATTAAA	-20	NA	29827824	29831021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29827918_29828046_29828317_29828542_29828819_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_118330.known	chr6	+	1127	6	FSM	ENSG00000204632.13	ENST00000376818.7	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.2097992144802	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACGTGTTTCTTGTG	20	False	NA	12	True	AATAAA	-23	NA	29827844	29831125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29827918_29828046_29828317_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_118331.known	chr6	+	851	5	FSM	ENSG00000204632.13	ENST00000376815.3	851	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.379806676741	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACGTGTTTCTTGTG	20	False	NA	12	True	AATAAA	-23	NA	29827844	29831125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29827918_29828046_29828317_29829815_29829933_29830377_29830411_29830767
transcript_118338.nnic	chr6	+	1016	6	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-50	593	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.16653333119993	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAGAGTCCACATGTT	0	True	NA	NA	False	AATAAA	-16	NA	29926408	29929825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_29926531_29928050_29928329_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_118339.nnic	chr6	+	668	5	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-77	496	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.76662979332984	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTTTCAAATTCTTG	53	False	NA	NA	False	ATTAAA	-20	NA	29926381	29929728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_29926531_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_118340.nnic	chr6	+	752	5	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-64	593	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.76662979332984	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCCAGAGTCCACATGTT	66	False	NA	NA	False	AATAAA	-16	NA	29926394	29929825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_29926531_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_118379.known	chr6	+	1535	8	FSM	ENSG00000206503.13	ENST00000376809.10	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	120.378823820844	11512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	-4	True	NA	15	True	AATAAA	-16	NA	29942531	29945870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29942627_29942756_29943027_29943267_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233_29945282_29945450
transcript_118380.known	chr6	+	1766	7	FSM	ENSG00000206503.13	ENST00000495183.5	1766	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	287.841053747068	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTGTGCTGATTT	16	False	NA	29	True	AATAAA	-30	NA	29942551	29945884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945062_29945092_29945233_29945282_29945450
transcript_118391.known	chr6	+	754	5	FSM	ENSG00000066379.15	ENST00000376785.2	754	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	76.985388224	2320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	8	True	NA	43	True	ATTAAA	-28	NA	30061262	30064909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30061414_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_118397.known	chr6	+	571	4	FSM	ENSG00000066379.15	ENST00000463141.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	82.0744919096197	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	1	True	NA	43	True	ATTAAA	-28	NA	30061329	30064909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30061399_30061514_30061670_30062223_30062334_30064672
transcript_118399.known	chr6	+	851	4	FSM	ENSG00000066379.15	ENST00000332435.10	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	9.97775303139718	2164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	10	True	NA	41	True	ATTAAA	-26	NA	30061264	30064907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30061670_30061916_30062018_30062223_30062334_30064672
transcript_11840.nic	chr1	+	889	7	ISM	ENSG00000143190.23	ENST00000367866.7	13843	16	-10	51036	0	2121	5prime_fragment	FALSE	canonical	3	38	junction_1	8.56348838577675	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTC	-11	True	NA	NA	False	ATTAAA	-34	NA	167220875	167376304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028
transcript_11841.known	chr1	+	557	5	FSM	ENSG00000143190.23	ENST00000559038.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.0513929049799	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATGTTCTGCTCAACCA	-11	True	NA	NA	False	NA	NA	NA	167220875	167365569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167220959_167241406_167241611_167303473_167303575_167332469_167332536_167365466
transcript_118418.known	chr6	+	1689	4	FSM	ENSG00000204619.8	ENST00000376769.6	1689	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	198.462982834471	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	-17	True	NA	18	True	AATAAA	-19	NA	30067204	30070333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30067480_30068278_30068354_30068589_30068699_30069103
transcript_118420.known	chr6	+	1464	4	FSM	ENSG00000204619.8	ENST00000376763.5	1464	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	200.84488210225	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	34	False	NA	18	True	AATAAA	-19	NA	30067575	30070333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30067626_30068278_30068354_30068589_30068699_30069103
transcript_118424.known	chr6	+	1621	3	FSM	ENSG00000204619.8	ENST00000376772.8	1621	3	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	4.5	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	-24	True	NA	18	True	AATAAA	-19	NA	30067197	30070333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30067480_30068589_30068699_30069103
transcript_11843.nnic	chr1	-	1522	7	NNC	ENSG00000198821.11	novel	1600	8	NA	NA	-23	0	intron_retention	FALSE	canonical	2	3	junction_4	2.5603819159562	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACTAAGCTTTATTTC	NA	False	NA	0	True	AATAAA	-19	NA	167439663	167430639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435435_167438569_167438651_167439343_167439401_167439515
transcript_118430.known	chr6	-	3318	9	FSM	ENSG00000234127.9	ENST00000453195.5	3318	9	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_8	31.0199028850833	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-22	True	NA	NA	False	AATAAA	-16	NA	30213427	30184454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30213304
transcript_118434.known	chr6	-	1124	6	FSM	ENSG00000234127.9	ENST00000416596.5	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	16.5093912667912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCAGAGCTCATGCAG	-14	True	NA	NA	False	NA	NA	NA	30213419	30196535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_11844.known	chr1	-	1078	6	FSM	ENSG00000198821.11	ENST00000470379.1	1078	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.93907194296653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATGGAAAGGAGCCTAG	NA	False	NA	NA	False	NA	NA	NA	167439640	167431172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435432_167438569_167438651_167439343
transcript_118441.known	chr6	+	3249	8	FSM	ENSG00000204599.15	ENST00000396551.8	3624	8	375	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	30.7418480981511	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	273	False	NA	27	True	NA	NA	NA	30326843	30343729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30326996_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_11845.known	chr1	-	1074	6	FSM	ENSG00000198821.11	ENST00000476733.5	1074	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	2.48193472919817	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTAGGCCAGGTGCAAC	NA	False	NA	NA	False	NA	NA	NA	167439621	167431160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435435_167438569_167438651_167439343
transcript_118450.known	chr6	+	1013	5	FSM	ENSG00000204599.15	ENST00000428728.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	34.022051672408	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACCTTTGCCCCTGCATA	334	False	NA	NA	False	NA	NA	NA	30326904	30335977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30326996_30328908_30329042_30329310_30329771_30330780_30330877_30335744
transcript_118454.known	chr6	-	732	5	FSM	ENSG00000270604.5	ENST00000453558.1	732	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGCATGTGTATAATTA	3285	False	NA	-4	True	AATAAA	-14	NA	30326134	30234038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30234269_30234357_30234451_30242146_30242312_30254346_30254465_30326008
transcript_118457.known	chr6	-	7267	5	FSM	ENSG00000231074.10	ENST00000664861.1	7267	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	112.5622050246	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	10	True	NA	NA	False	AATACA	-39	NA	30326809	30286805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326150
transcript_118458.known	chr6	-	7199	5	FSM	ENSG00000231074.10	ENST00000653541.1	7199	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	109.782455337818	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	1	True	NA	NA	False	NA	NA	NA	30326866	30286727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326353
transcript_11846.known	chr1	-	1969	4	FSM	ENSG00000143162.9	ENST00000370509.5	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	41.8754767800386	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGGATTCGTTTTCTT	0	True	NA	NA	False	ATTAAA	-19	NA	167553762	167541012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167542302_167546100_167546286_167548001_167548122_167553387
transcript_118463.known	chr6	+	457	4	FSM	ENSG00000241370.6	ENST00000491477.5	457	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	568.748333330891	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTCCATTTTCTTCTG	-4	True	NA	51	True	NA	NA	NA	30345152	30346884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345490_30345574_30346431_30346558_30346712
transcript_118468.known	chr6	-	6734	4	FSM	ENSG00000231074.10	ENST00000668974.1	6734	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	91.7205902001653	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	2929	False	NA	NA	False	AATACA	-39	NA	30326490	30286805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326150
transcript_118469.known	chr6	-	7230	4	FSM	ENSG00000231074.10	ENST00000659132.1	7230	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	65.4335965353851	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCCATCTCAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	30327086	30286702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326353
transcript_11847.known	chr1	+	4978	6	FSM	ENSG00000197965.12	ENST00000359523.7	4978	6	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_5	66.8413045952875	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTAGTAATTTTATAA	-8	True	NA	NA	False	AATAAA	-17	NA	167721981	167791919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167776063_167776167_167787819
transcript_118478.known	chr6	-	559	3	FSM	ENSG00000231074.10	ENST00000602550.5	559	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	29.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCAGGCAGAGCTGA	-10	True	NA	NA	False	NA	NA	NA	30326404	30289295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30289495_30296131_30296238_30326150
transcript_118482.known	chr6	-	4433	3	FSM	ENSG00000231074.10	ENST00000454129.5	4433	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	124	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	18	True	NA	NA	False	NA	NA	NA	30326376	30291005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30294965_30296131_30296238_30326008
transcript_118483.known	chr6	-	5050	3	FSM	ENSG00000231074.10	ENST00000426882.6	5050	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	79.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAACAATGTTAAAA	2269	False	NA	-45	True	NA	NA	NA	30327150	30290817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30294965_30296131_30296238_30326353
transcript_118485.known	chr6	-	4518	3	FSM	ENSG00000231074.10	ENST00000449544.6	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	112	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCCAAAGTTTGTCAC	-1	True	NA	-25	True	NA	NA	NA	30326395	30290797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30294965_30296131_30296238_30326150
transcript_118494.known	chr6	+	522	5	FSM	ENSG00000241370.6	ENST00000436442.2	522	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	498.95609776813	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	12	True	NA	24	True	AATAAA	-22	NA	30345168	30346857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346565_30346712
transcript_118495.known	chr6	+	621	4	FSM	ENSG00000241370.6	ENST00000473266.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	102.944429453738	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	-2	True	NA	24	True	AATAAA	-22	NA	30345154	30346857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30345574_30346431_30346558_30346712
transcript_118496.known	chr6	+	577	5	FSM	ENSG00000241370.6	ENST00000433076.6	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	502.756899505119	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	NA	False	NA	24	True	AATAAA	-22	NA	30345130	30346857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30345399_30345466_30345574_30346431_30346558_30346712
transcript_118497.known	chr6	+	594	4	FSM	ENSG00000241370.6	ENST00000428040.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1104	junction_3	82.7862038962746	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	2	True	NA	24	True	AATAAA	-22	NA	30345158	30346857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345399_30345490_30345574_30346431_30346558_30346712
transcript_118498.known	chr6	+	1492	3	FSM	ENSG00000241370.6	ENST00000498414.5	1492	3	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_1	16.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	-15	True	NA	24	True	AATAAA	-22	NA	30345141	30346857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30346558_30346712
transcript_118499.known	chr6	+	450	4	FSM	ENSG00000241370.6	ENST00000489124.5	450	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	512.358164655243	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	-6	True	NA	24	True	AATAAA	-22	NA	30345150	30346857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30345399_30346431_30346558_30346712
transcript_11850.known	chr1	+	630	5	FSM	ENSG00000197965.12	ENST00000474859.5	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	326.468222037	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTCCGGCGGACATCAC	162	False	NA	NA	False	NA	NA	NA	167722151	167787844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167787819
transcript_118500.known	chr6	+	3535	8	FSM	ENSG00000204599.15	ENST00000376659.9	3535	8	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	37.2284727550496	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	24	False	NA	27	True	NA	NA	NA	30327258	30343729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30327697_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_118501.known	chr6	+	2548	8	FSM	ENSG00000204592.9	ENST00000376630.5	2548	8	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_2	12.2807298859071	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTCATTTGTGCGT	-2	True	NA	23	True	AATAAA	-19	NA	30489508	30494194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30489596_30489725_30489996_30490239_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
transcript_118513.known	chr6	+	851	2	FSM	ENSG00000235781.1	ENST00000415195.1	851	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCTGGATCTCCCAGAG	NA	False	NA	NA	False	NA	NA	NA	30516265	30519217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30516612_30518712
transcript_118518.known	chr6	-	6801	12	FSM	ENSG00000204590.13	ENST00000376621.8	6801	12	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_5	38.8429769650079	1822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTTGGATATGTTTCT	-3	True	NA	NA	False	AATAAA	-32	NA	30556489	30541380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130
transcript_118519.known	chr6	+	2005	5	FSM	ENSG00000204576.12	ENST00000498336.5	2005	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.22494979899437	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	11	True	NA	79	True	AATAAA	-28	NA	30557315	30563723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30558149_30558213_30561327_30561509_30561833_30562125_30562388
transcript_11852.known	chr1	+	3421	3	FSM	ENSG00000197965.12	ENST00000392121.7	3421	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	407	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGTGTTGTGTGCTCA	-1	True	NA	21	True	AATACA	-15	NA	167721988	167790819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167722243_167765582_167765750_167787819
transcript_118520.known	chr6	+	1845	4	FSM	ENSG00000204576.12	ENST00000376560.8	1845	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	16.8720676464584	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	-10	True	NA	79	True	AATAAA	-28	NA	30557294	30563723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30558149_30558213_30561833_30562125_30562388
transcript_118521.known	chr6	+	1944	4	FSM	ENSG00000204576.12	ENST00000481741.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.8878405775519	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	9	True	NA	79	True	AATAAA	-28	NA	30557313	30563723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30561327_30561509_30561833_30562125_30562388
transcript_118524.nic	chr6	+	961	3	ISM	ENSG00000204576.12	ENST00000498336.5	2005	5	-325	1958	-289	-1958	5prime_fragment	FALSE	canonical	3	26	junction_1	4	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGGTTTATCAGGATTCA	-15	True	NA	10	True	AATAAA	-15	NA	30556990	30561765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30557451_30558149_30558213_30561327
transcript_118526.known	chr6	+	1797	3	FSM	ENSG00000204576.12	ENST00000376557.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	16	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	-1	True	NA	79	True	AATAAA	-28	NA	30557279	30563723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30561833_30562125_30562388
transcript_118529.known	chr6	+	391	2	FSM	ENSG00000204576.12	ENST00000491173.1	391	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTTGTGGAAATACAC	13	False	NA	NA	False	GATAAA	-35	NA	30557346	30558436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30558149
transcript_118530.nic	chr6	+	893	2	ISM	ENSG00000204576.12	ENST00000481741.5	1944	4	-318	1958	-284	-1958	5prime_fragment	FALSE	canonical	3	32	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGGTTTATCAGGATTCA	-10	True	NA	10	True	AATAAA	-15	NA	30556995	30561765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30557451_30561327
transcript_118534.known	chr6	+	3131	24	FSM	ENSG00000204574.14	ENST00000376545.7	3131	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	155.38220454609	2977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTTTGGAGATTG	NA	False	NA	16	True	AATAAA	-21	NA	30571392	30591313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_118535.known	chr6	+	3426	25	FSM	ENSG00000204574.14	ENST00000441867.6	3426	25	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	89.5865115715282	2690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	NA	False	NA	2	True	AAAAAG	-20	NA	30571423	30591522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_118536.known	chr6	+	606	7	FSM	ENSG00000204574.14	ENST00000468958.1	606	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	236.387217646527	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAATTATAAAG	-11	True	NA	NA	False	AATAAA	-32	NA	30571441	30580448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30571561_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405
transcript_118537.known	chr6	-	4511	20	FSM	ENSG00000204569.10	ENST00000376511.7	4511	20	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_19	25.5334227762429	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTATTTAACCCCTAG	-2	True	NA	-13	True	AATAAA	-15	NA	30617243	30600412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30601659_30601935_30602692_30602845_30602960_30603209_30603286_30603471_30603667_30603779_30603844_30604007_30604255_30604352_30604512_30604587_30604736_30604993_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_11854.known	chr1	+	607	2	FSM	ENSG00000197965.12	ENST00000464954.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAAATAAGTTCAGCAT	0	True	NA	NA	False	NA	NA	NA	167721949	167765896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167722243_167765582
transcript_118549.known	chr6	+	1398	7	FSM	ENSG00000204568.12	ENST00000259873.5	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_4	68.2609372595744	5635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGCTGTTTCCGAT	-7	True	NA	25	True	AATAAA	-19	NA	30617839	30626392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
transcript_11855.known	chr1	-	703	2	FSM	ENSG00000143199.18	ENST00000476818.2	703	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTTGAAATGTGTGT	9609	False	NA	NA	False	AATAAA	-16	NA	167914089	167904609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167905199_167913975
transcript_118550.known	chr6	+	512	4	FSM	ENSG00000204568.12	ENST00000492316.5	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_3	65.8803629484706	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAACACGGTGAAACCCC	-4	True	NA	NA	False	NA	NA	NA	30617842	30620124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920
transcript_118554.known	chr6	+	1476	13	FSM	ENSG00000137343.18	ENST00000376485.8	1476	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	42.5645751248095	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	-11	True	NA	14	True	AATAAA	-23	NA	30626855	30646823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_118558.known	chr6	+	1195	12	FSM	ENSG00000137343.18	ENST00000468713.5	1195	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	52.1090718771773	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	-8	True	NA	14	True	AATAAA	-23	NA	30626892	30646823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066_30646110_30646468
transcript_11856.known	chr1	+	718	2	FSM	ENSG00000232194.1	ENST00000451545.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAACGTAGTAGGTTAAA	NA	False	NA	NA	False	NA	NA	NA	167820405	167821224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167820562_167820662
transcript_118561.nic	chr6	+	1421	12	NIC	ENSG00000137343.18	novel	1476	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_7	58.7954852935928	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	8993	False	NA	12	True	AATAAA	-21	NA	30626839	30646821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_118564.known	chr6	+	2119	11	FSM	ENSG00000137343.18	ENST00000329992.12	2119	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	62.6277893590377	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	19	True	NA	53	True	AAAAAG	-17	NA	30626885	30644679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30643528
transcript_118565.known	chr6	+	1527	11	FSM	ENSG00000137343.18	ENST00000471782.5	1527	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	53.0253712858288	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	5	False	NA	14	True	AATAAA	-23	NA	30626919	30646823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066
transcript_11857.known	chr1	+	3302	20	FSM	ENSG00000143164.16	ENST00000367843.7	3302	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	34.9334943925012	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTTTATTTAATGC	-26	True	NA	17	True	ATTAAA	-29	NA	167936660	168075843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168022987_168023048_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_118570.known	chr6	+	2646	10	FSM	ENSG00000137343.18	ENST00000376483.8	2646	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	37.513783475108	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	9	True	NA	53	True	AAAAAG	-17	NA	30626875	30644679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767
transcript_118572.known	chr6	+	2061	10	FSM	ENSG00000137343.18	ENST00000319027.9	2061	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	78.1685421870865	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	8	True	NA	53	True	AAAAAG	-17	NA	30626874	30644679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30643528
transcript_118577.known	chr6	+	2611	9	FSM	ENSG00000137343.18	ENST00000318999.11	2611	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	62.2985503442897	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	8995	False	NA	53	True	AAAAAG	-17	NA	30626841	30644679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767
transcript_118579.known	chr6	+	718	8	FSM	ENSG00000137343.18	ENST00000493388.5	718	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_7	27.6767050061961	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCTAAAGCAACCCAAG	0	True	NA	NA	False	NA	NA	NA	30626914	30640698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534
transcript_118581.known	chr6	+	1738	13	FSM	ENSG00000137343.18	ENST00000330083.6	1738	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	57.9436987274908	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	7	True	NA	12	True	AATAAA	-21	NA	30626873	30646821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30627275_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_118583.known	chr6	-	3406	20	FSM	ENSG00000204560.10	ENST00000376442.8	3406	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_8	34.9078724185062	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGATATGTGAAATTC	1	True	NA	-14	True	AATAAA	-44	NA	30673006	30653126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_118584.known	chr6	+	1402	6	FSM	ENSG00000204564.12	ENST00000376473.9	1402	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	19.2208220427743	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCAGGTTCTGTTT	36	False	NA	15	True	ATTAAA	-22	NA	30647072	30653210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_118585.nnic	chr6	+	1259	6	NNC	ENSG00000204564.12	novel	1402	6	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	35.5212612388693	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAGAATTTCACATATCAC	NA	False	NA	18	True	AATAAA	-19	NA	30646999	30653102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652909
transcript_118587.known	chr6	+	1496	6	FSM	ENSG00000204564.12	ENST00000446773.6	1496	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	19.8595065396903	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	7	True	NA	25	True	AATAAA	-26	NA	30647420	30653109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30647847_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_118590.known	chr6	+	614	5	FSM	ENSG00000204564.12	ENST00000376471.8	614	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	36.6708330966178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCTTGGAGTGGAG	19	True	NA	NA	False	GGGGCT	-44	NA	30647163	30652915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30647304_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_118592.nnic	chr6	-	1078	5	NNC	ENSG00000204560.10	novel	3406	20	NA	NA	-60	-2892	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	82.0712343028908	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAATGACTGCTTTT	9504	False	NA	-1	True	AATAAA	-24	NA	30673066	30668021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_30668209_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_118600.nic	chr6	-	654	2	ISM	ENSG00000204560.10	ENST00000376442.8	3406	20	-60	17926	-60	-5923	5prime_fragment	FALSE	canonical	3	193	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGAAAACAGGGTA	9504	False	NA	3	True	NA	NA	NA	30673066	30671052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_30671275_30672634
transcript_118601.known	chr6	-	1933	12	FSM	ENSG00000204560.10	ENST00000376437.9	1933	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	79.1340530183273	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAAATTCTATCTCAT	NA	False	NA	-6	True	AATAAA	-35	NA	30661983	30653118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30661755
transcript_118602.known	chr6	-	1328	4	FSM	ENSG00000146112.12	ENST00000488324.1	1328	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.8325958557674	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	4231	False	NA	-3	True	AATAAA	-17	NA	30687193	30676388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30677289_30679178_30679390_30684407_30684545_30687113
transcript_118603.known	chr6	-	2853	4	FSM	ENSG00000146112.12	ENST00000399199.7	2853	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	17.9133717900592	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	0	True	NA	-3	True	AATAAA	-17	NA	30687216	30676388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30677289_30679178_30679390_30684407_30686047_30687113
transcript_118604.known	chr6	-	4597	3	FSM	ENSG00000146112.12	ENST00000615527.1	4597	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTCTGCTTCTCCTTC	3529	False	NA	-5	True	AATAAA	-15	NA	30687895	30676390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30677289_30679178_30679390_30684407
transcript_118605.known	chr6	-	1156	3	FSM	ENSG00000146112.12	ENST00000467662.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	21.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	17	True	NA	-3	True	AATAAA	-17	NA	30687158	30676388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30677289_30679178_30679390_30687113
transcript_118610.known	chr6	-	1453	4	FSM	ENSG00000137404.15	ENST00000470733.1	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	27.9205221218292	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-14	True	NA	-4	True	AATAAA	-21	NA	30691002	30688046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30689275_30689453_30690024_30690244_30690841
transcript_118612.known	chr6	-	1411	4	FSM	ENSG00000137404.15	ENST00000376421.7	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	10.6562449087639	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATGCAGTCTGTCAG	4	True	NA	-6	True	AATAAA	-19	NA	30690984	30688048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30689275_30689453_30690046_30690244_30690841
transcript_118614.known	chr6	-	1260	3	FSM	ENSG00000137404.15	ENST00000462857.5	1260	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	37	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	2	True	NA	-4	True	AATAAA	-21	NA	30690986	30688046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30690024_30690244_30690841
transcript_118615.known	chr6	-	1228	3	FSM	ENSG00000137404.15	ENST00000376420.9	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	34.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	12	True	NA	-4	True	AATAAA	-21	NA	30690976	30688046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30690046_30690244_30690841
transcript_118617.known	chr6	-	1199	3	FSM	ENSG00000137404.15	ENST00000482141.5	1199	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	457	False	NA	-4	True	AATAAA	-21	NA	30690967	30688046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30689275_30689453_30690841
transcript_118618.known	chr6	-	1029	2	FSM	ENSG00000137404.15	ENST00000474864.5	1029	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	14	True	NA	-4	True	AATAAA	-21	NA	30690974	30688046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30690841
transcript_118619.known	chr6	-	1401	4	FSM	ENSG00000137404.15	ENST00000444096.5	1401	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.2894519672072	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	701	False	NA	-4	True	AATAAA	-21	NA	30690723	30688046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30689275_30689453_30690046_30690244_30690592
transcript_11862.known	chr1	+	3186	19	FSM	ENSG00000143164.16	ENST00000312263.10	3186	19	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	16.9934627953745	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	21	True	NA	8	True	ATTAAA	-20	NA	167936707	168075834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_118630.known	chr6	-	6968	15	FSM	ENSG00000137337.16	ENST00000376406.8	6968	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	65.1762524049291	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	18	True	NA	-19	True	AATAAA	-19	NA	30717281	30699806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30707565_30708358_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
transcript_118636.known	chr6	+	2632	4	FSM	ENSG00000196230.14	ENST00000330914.7	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_1	5560.76711334766	7796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	-8	True	NA	36	True	AATAAA	-20	NA	30721573	30725426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30721899_30722536_30722646_30722917_30723029_30723339
transcript_118640.known	chr6	+	2515	4	FSM	ENSG00000196230.14	ENST00000327892.13	2515	4	0	0	0	0	multi-exon	FALSE	canonical	3	12703	junction_2	590.579940961989	21723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGATGTGTGCTTAT	-2	True	NA	32	True	AATAAA	-16	NA	30720351	30725422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30720564_30722536_30722646_30722917_30723029_30723339
transcript_118645.nic	chr6	-	1729	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-4	-121	combination_of_known_junctions	FALSE	canonical	3	58	junction_12	182.491761610094	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	2017	False	NA	-16	True	ATTAAA	-14	NA	30742528	30727829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742383
transcript_118646.nic	chr6	-	1648	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-6	-121	combination_of_known_junctions	FALSE	canonical	3	121	junction_12	165.909781373961	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	2015	False	NA	-16	True	ATTAAA	-14	NA	30742530	30727829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742466
transcript_118647.known	chr6	-	1866	13	FSM	ENSG00000137312.15	ENST00000376389.8	1866	13	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_9	57.1639941066247	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCCGGCACAGTGG	-4	True	NA	-13	True	AATAAA	-22	NA	30742687	30727708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526
transcript_118659.nic	chr6	-	1481	11	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-6	-121	combination_of_known_junctions	FALSE	canonical	3	52	junction_9	252.771220671974	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	2015	False	NA	-16	True	ATTAAA	-14	NA	30742530	30727829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30742146_30742204_30742466
transcript_11868.known	chr1	-	2223	6	FSM	ENSG00000143158.11	ENST00000271373.9	2223	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	222.103939631876	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTCTTGTCAGTCAAAT	-10	True	NA	42	True	ATTAAA	-26	NA	167937072	167916674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732_167935899_167936938
transcript_118680.known	chr6	-	1001	2	FSM	ENSG00000137312.15	ENST00000484693.1	1001	2	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCTACTCTGGCTACAG	6	True	NA	NA	False	NA	NA	NA	30742677	30741353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30742204_30742526
transcript_118682.known	chr6	-	629	7	FSM	ENSG00000137312.15	ENST00000454845.1	629	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_6	215.134647759645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGATCCGGGTGAGAG	2021	False	NA	NA	False	AAAAAG	-35	NA	30742524	30740508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742466
transcript_118683.known	chr6	+	527	2	FSM	ENSG00000272273.2	ENST00000607333.2	573	2	0	46	0	-43	multi-exon	FALSE	canonical	3	14	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCTTGCATAAGTTAAAA	-8	True	NA	25	True	AATAAA	-40	NA	30742928	30743592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30743097_30743233
transcript_118685.known	chr6	-	1237	2	FSM	ENSG00000137331.12	ENST00000259874.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	-2	True	NA	-19	True	AATAAA	-19	NA	30744547	30743198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30744197_30744308
transcript_118686.known	chr6	-	1350	1	FSM	ENSG00000137331.12	ENST00000376377.2	1350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	-3	True	NA	-19	True	AATAAA	-19	NA	30744548	30743198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30743200_30744500
transcript_118690.known	chr6	-	2052	2	FSM	ENSG00000214894.7	ENST00000399196.1	2052	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGTAAA	-3	True	NA	NA	False	NA	NA	NA	30830659	30812865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30814773_30830514
transcript_1187.known	chr1	+	2347	11	FSM	ENSG00000204859.13	ENST00000377674.9	2347	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	25.2142816673408	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-20	True	NA	22	True	AATAAA	-24	NA	6579993	6589280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6580137_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_11870.known	chr1	-	2177	5	FSM	ENSG00000143158.11	ENST00000367846.8	2177	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_3	49.7543967906355	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTTTCACTTCCTT	-18	True	NA	-12	True	ATTAAA	-12	NA	167936040	167916728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
transcript_11871.known	chr1	-	522	1	FSM	ENSG00000224837.1	ENST00000443090.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAACTCCTAAATAAA	NA	False	NA	NA	False	CATAAA	-17	NA	168056422	168055900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_168055900_168056400
transcript_118725.nnic	chr6	-	1035	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-144	451	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	60.6025302002042	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTCAATTTTTTGTT	NA	False	NA	-3	True	AATAAA	-21	NA	30848303	30839074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_30839464_30839822_30840020_30847036_30847150_30847967
transcript_118751.known	chr6	-	799	3	FSM	ENSG00000237923.1	ENST00000442852.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	53	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGGAGTTCGAGACCAG	88	False	NA	NA	False	NA	NA	NA	30848159	30839525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30840020_30847036_30847150_30847967
transcript_11876.known	chr1	-	7806	6	FSM	ENSG00000143147.15	ENST00000271357.9	7806	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	38.4884398228871	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGTGGAAATGGTGAAT	110	False	NA	-30	True	ATTAAA	-19	NA	168137573	168079542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_168085797_168087584_168087705_168090563_168090669_168096507_168097233_168104476_168104895_168137389
transcript_11877.nic	chr1	-	838	2	ISM	ENSG00000143147.15	ENST00000271357.9	7806	6	14	24684	14	-13781	5prime_fragment	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTCTTGGTTTGTAGA	124	False	NA	-4	True	AATAAA	-15	NA	168137559	168104226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_168104895_168137389
transcript_118779.nic	chr6	-	465	2	ISM	ENSG00000237923.1	ENST00000442852.1	799	3	-163	7514	-163	-7514	5prime_fragment	FALSE	canonical	3	184	junction_1	0	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTAACTTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	30848322	30847039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_30847150_30847967
transcript_118784.nnic	chr6	+	3635	17	NIC	ENSG00000204580.14	novel	3832	16	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_1	171.51603423587	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGAGTGGGTTCCTTG	185	False	NA	25	True	AATAAA	-18	NA	30881268	30900156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_30881371_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_118785.known	chr6	+	3588	17	FSM	ENSG00000204580.14	ENST00000418800.6	3588	17	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	143.827030991222	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGGGTAGCCCCGCC	1529	False	NA	NA	False	NA	NA	NA	30882612	30899840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_118795.known	chr6	+	1712	14	FSM	ENSG00000213780.11	ENST00000259895.9	1712	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.41857423549425	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	0	True	NA	40	True	AATAAA	-17	NA	30908206	30914106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_118797.known	chr6	+	1673	14	FSM	ENSG00000213780.11	ENST00000376316.5	1673	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.91976065696355	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	14	True	NA	40	True	AATAAA	-17	NA	30908220	30914106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30908379_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_118798.nic	chr6	+	1913	13	NIC	ENSG00000213780.11	novel	1712	14	NA	NA	-50	0	intron_retention	FALSE	canonical	3	19	junction_3	5.55965126804031	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	436	False	NA	40	True	AATAAA	-17	NA	30908156	30914106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913388_30913810
transcript_11880.nnic	chr1	+	2074	8	NNC	ENSG00000143155.13	novel	2998	7	NA	NA	-141	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	173.502925929572	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTACTATTTCATTTATT	NA	False	NA	19	True	AATAAA	-23	NA	168178820	168202114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902_168200705_168201774
transcript_118805.nic	chr6	+	622	3	ISM	ENSG00000213780.11	ENST00000453897.4	598	5	-66	965	-50	-965	5prime_fragment	FALSE	canonical	3	23	junction_1	1.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTTTTCCCTTTTAT	436	False	NA	NA	False	AATAAA	-21	NA	30908156	30909669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30908404_30909033_30909174_30909434
transcript_118807.known	chr6	+	3575	30	FSM	ENSG00000137411.19	ENST00000676266.1	3575	30	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	26.2830563053745	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	-20	True	NA	17	True	GATAAA	-17	NA	30914237	30926459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_118808.nnic	chr6	-	407	3	NNC	ENSG00000233529.1	novel	605	3	NA	NA	-940	-7688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCCGTTTTTTTTGTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	30955802	30953666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_30953712_30954776_30954916_30955579
transcript_118811.known	chr6	-	868	2	FSM	ENSG00000204538.4	ENST00000259845.5	868	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATCTAGGCTGCTGC	1	True	NA	NA	False	AATAAA	-17	NA	31139066	31137533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31138307_31138971
transcript_118812.known	chr6	+	655	4	FSM	ENSG00000204540.11	ENST00000547221.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTTCCCTGCCTGGTC	8114	False	NA	NA	False	AATAAA	-15	NA	31137648	31140037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31137682_31138358_31138460_31138655_31138780_31139640
transcript_118814.known	chr6	-	2681	19	FSM	ENSG00000204536.15	ENST00000652427.1	2681	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	46.3839318708803	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTACAGAAGGAGCCATTG	-34	True	NA	-25	True	AATAAA	-4	NA	31158214	31142451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31148891_31148985_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_118815.nic	chr6	-	2753	19	NIC	ENSG00000204536.15	novel	2971	18	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_18	38.6580450158107	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8508	False	NA	-12	True	AATAAA	-17	NA	31158250	31142438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31157384_31157501_31158166
transcript_118819.known	chr6	-	2625	18	FSM	ENSG00000204536.15	ENST00000376266.9	2625	18	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_17	23.359385686571	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	8520	False	NA	-12	True	AATAAA	-17	NA	31158238	31142438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_11883.known	chr1	+	2998	7	FSM	ENSG00000143155.13	ENST00000367833.7	2998	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	144.413757424053	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTTTACTATTTCAT	4	True	NA	14	True	AATAAA	-18	NA	168178961	168202109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902
transcript_118837.known	chr6	-	1409	5	FSM	ENSG00000204531.21	ENST00000259915.13	1409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1707.84820754071	107261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	-2	True	NA	-5	True	AATAAA	-33	NA	31170682	31164336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170215
transcript_118871.known	chr6	+	3039	4	FSM	ENSG00000137310.12	ENST00000376255.4	3039	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	19.2006944318862	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	-22	True	NA	29	True	AATAAA	-17	NA	31158546	31164215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31158723_31159142_31159708_31161446_31162006_31162476
transcript_118873.known	chr6	+	3243	4	FSM	ENSG00000137310.12	ENST00000376257.8	3243	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	17.7951304200522	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	20	True	NA	29	True	AATAAA	-17	NA	31158588	31164215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31158723_31158896_31159708_31161446_31162006_31162476
transcript_11889.known	chr1	+	727	5	FSM	ENSG00000143155.13	ENST00000367830.3	727	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	172.662061553776	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACAAGTATGGTTATTC	10	False	NA	NA	False	AATAAA	-27	NA	168179054	168192395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168192207
transcript_118902.known	chr6	-	1880	6	FSM	ENSG00000204525.18	ENST00000487245.5	1880	6	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_4	121.485143124581	3616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	1038	False	NA	-10	True	AATAAA	-21	NA	31272050	31268748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072
transcript_118903.known	chr6	-	1554	8	FSM	ENSG00000204525.18	ENST00000383329.7	1554	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	319.005917672704	2979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	1	True	NA	-10	True	AATAAA	-21	NA	31272086	31268748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
transcript_118904.known	chr6	-	862	2	FSM	ENSG00000204525.18	ENST00000484378.1	862	2	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAAGGAGACGCTGCAGC	-3	True	NA	NA	False	NA	NA	NA	31272090	31271098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31271869_31271998
transcript_118909.known	chr6	-	1536	8	FSM	ENSG00000234745.13	ENST00000412585.7	1536	8	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_7	122.365961653675	8509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGCATGTTCGCTGTG	-3	True	NA	-9	True	AATAAA	-18	NA	31357179	31353874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
transcript_118910.known	chr6	-	917	3	FSM	ENSG00000234745.13	ENST00000497377.5	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_2	18.5	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCATGTTCGCTGTGCTG	2135	False	NA	-6	True	AATAAA	-21	NA	31355076	31353871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31354297_31354478_31354527_31354632
transcript_118914.known	chr6	+	2260	6	FSM	ENSG00000204520.14	ENST00000616296.4	2260	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.1809090751257	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTCATTGTTTTTG	NA	False	NA	6	True	NA	NA	NA	31399783	31415313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31400784_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_118917.known	chr6	+	9148	2	FSM	ENSG00000206337.12	ENST00000414046.3	9148	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAATGATTAAGACTT	NA	False	NA	NA	False	TATAAA	-22	NA	31463169	31472408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31463280_31463370
transcript_118919.known	chr6	+	1370	6	FSM	ENSG00000204520.14	ENST00000449934.7	1370	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.0876161703348	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCATTGTTTTTGTT	7	True	NA	8	True	NA	NA	NA	31403594	31415315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31403703_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_118920.known	chr6	+	2411	6	FSM	ENSG00000204516.10	ENST00000538442.5	2411	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.6698549067321	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTGGTCTGTGTTTT	NA	False	NA	NA	False	TTTAAA	-4	NA	31494880	31511123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31494996_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_118921.known	chr6	+	2416	6	FSM	ENSG00000204516.10	ENST00000252229.7	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	10.6207344378814	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	-4	True	NA	NA	False	AATAGA	-1	NA	31498144	31511124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31498264_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_118948.known	chr6	+	1411	4	FSM	ENSG00000204498.11	ENST00000376146.8	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	19.1891172861657	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	15	False	NA	31	True	NA	NA	NA	31546869	31558829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31546974_31548162_31548440_31557627_31557850_31558021
transcript_118950.known	chr6	-	1370	3	FSM	ENSG00000213760.11	ENST00000303892.10	1370	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	1.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTTGCCTCATCATTT	-15	True	NA	0	True	AATAAA	-38	NA	31546608	31544443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31545582_31546108_31546210_31546477
transcript_118951.known	chr6	-	662	3	FSM	ENSG00000213760.11	ENST00000483251.1	662	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	15.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTTGTTCTTTAAC	683	False	NA	NA	False	TATAAA	-20	NA	31546848	31545237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31545582_31546108_31546210_31546631
transcript_118952.known	chr6	-	2003	11	FSM	ENSG00000198563.14	ENST00000458640.5	2003	11	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_10	338.730512354585	5062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	5083	False	NA	-2	True	ACTAAA	-32	NA	31542448	31530218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_118953.known	chr6	-	4027	10	FSM	ENSG00000198563.14	ENST00000462256.5	4027	10	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_9	355.807931264351	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	5514	False	NA	-2	True	ACTAAA	-32	NA	31542017	31530218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_118954.known	chr6	-	1681	11	FSM	ENSG00000198563.14	ENST00000396172.6	1681	11	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_10	255.532561525924	7199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	-7	True	NA	-9	True	ACTAAA	-25	NA	31542003	31530225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
transcript_118955.known	chr6	+	1451	4	FSM	ENSG00000204498.11	ENST00000376148.9	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	17.9691092959247	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	6	True	NA	31	True	NA	NA	NA	31547607	31558829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31547752_31548162_31548440_31557627_31557850_31558021
transcript_118956.known	chr6	+	1401	4	FSM	ENSG00000204498.11	ENST00000376145.8	1401	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	26.0426999794995	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	11	True	NA	31	True	NA	NA	NA	31547612	31558829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31547752_31548162_31548440_31557627_31557805_31558021
transcript_118963.known	chr6	+	655	6	FSM	ENSG00000204472.13	ENST00000376059.8	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	33.7283263741325	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	-33	True	NA	8	True	AATAAA	-16	NA	31615233	31617015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31615355_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_118964.known	chr6	+	607	6	FSM	ENSG00000204472.13	ENST00000337917.11	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	34.1853769907544	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	-40	True	NA	14	True	AATAAA	-22	NA	31615226	31617021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31615294_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_118970.known	chr6	+	524	3	FSM	ENSG00000204472.13	ENST00000376049.4	524	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	-6	True	NA	14	True	AATAAA	-22	NA	31615990	31617021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31616146_31616343_31616507_31616815
transcript_118972.nic	chr6	+	3532	16	ISM	ENSG00000204469.13	ENST00000376007.8	6861	31	11081	0	-2153	0	3prime_fragment	FALSE	canonical	3	420	junction_1	80.6520647941239	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACAATGATTTGGGGG	1996	False	NA	30	True	AATAAA	-19	NA	31631800	31637771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_31632993_31633378_31633648_31633858_31633990_31634235_31634366_31634471_31634558_31634752_31634978_31635131_31635273_31635393_31635466_31635581_31635750_31635966_31636050_31636208_31636420_31636509_31636609_31636732_31636946_31637041_31637137_31637233_31637325_31637445
transcript_118975.known	chr6	-	3887	26	FSM	ENSG00000204463.14	ENST00000676615.2	3843	26	-44	0	0	0	multi-exon	FALSE	canonical	3	112	junction_25	82.7801908671392	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_118978.known	chr6	-	3920	26	FSM	ENSG00000204463.14	ENST00000676571.1	3920	26	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	94.8822090805226	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644228_31644306_31644415_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_11898.known	chr1	+	354	1	FSM	ENSG00000237049.1	ENST00000450455.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAACTGTTGCTGGG	NA	False	NA	NA	False	AAAAAG	-9	NA	168210615	168210969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168210600_168211000
transcript_118981.known	chr6	-	3644	25	FSM	ENSG00000204463.14	ENST00000375976.8	3644	25	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_24	68.2463750563598	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	2	True	NA	-13	True	AATAAA	-31	NA	31652393	31639027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_118983.known	chr6	-	3779	25	FSM	ENSG00000204463.14	ENST00000211379.9	3779	25	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_24	69.6828006636741	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8057	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_11899.known	chr1	+	11040	8	FSM	ENSG00000213064.10	ENST00000271375.7	11040	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	11.5493616750901	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTAGTGTTGTCTCTT	-20	True	NA	12	True	AATAAA	-22	NA	168226003	168253021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500
transcript_118994.known	chr6	-	3626	24	FSM	ENSG00000204463.14	ENST00000362049.10	3626	24	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_23	75.6064829538465	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	8062	False	NA	-14	True	AATAAA	-30	NA	31652700	31639028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_119005.known	chr6	+	761	6	FSM	ENSG00000204444.11	ENST00000375916.4	761	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.09945053286186	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	-1	True	NA	10	True	AATAAA	-20	NA	31655893	31658210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31656081_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_119009.nnic	chr6	+	570	5	NIC	ENSG00000204444.11	novel	709	6	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	10.9630059746403	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	-4	True	NA	10	True	AATAAA	-20	NA	31652400	31658210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_31652552_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_11901.known	chr1	+	1073	7	FSM	ENSG00000213064.10	ENST00000630869.1	1073	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	33.293726469445	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCGCCTGACTGTGGAA	-16	True	NA	NA	False	NA	NA	NA	168226007	168243140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168236588_168236625_168236711_168236771_168239130_168239161_168242500
transcript_119014.known	chr6	-	609	4	FSM	ENSG00000204463.14	ENST00000464126.1	609	4	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_2	66.0824400948459	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	8748	False	NA	-13	True	AATAAA	-31	NA	31640539	31639027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384
transcript_119015.known	chr6	-	1056	7	FSM	ENSG00000204463.14	ENST00000424480.5	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	105.920436596952	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGCACCCAAGTGAGAG	8095	False	31652686	NA	False	NA	NA	NA	31652667	31647603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652399
transcript_119016.known	chr6	+	709	6	FSM	ENSG00000204444.11	ENST00000375920.8	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.77493455452533	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	-21	True	NA	10	True	AATAAA	-20	NA	31652416	31658210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31652552_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_119017.known	chr6	-	2481	1	FSM	ENSG00000204439.4	ENST00000375911.2	2481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	189	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTTTAGGTGGTAGA	-16	True	NA	30	True	NA	NA	NA	31660778	31658297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31658300_31660800
transcript_119025.known	chr6	+	1061	7	FSM	ENSG00000204435.15	ENST00000375885.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	414.830788796267	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	-17	True	NA	17	True	AATAAA	-20	NA	31665235	31670070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31665494_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_119026.known	chr6	+	936	7	FSM	ENSG00000204435.15	ENST00000375866.2	936	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	418.894842280123	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	221	False	NA	17	True	AATAAA	-20	NA	31666354	31670070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31666488_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_119027.known	chr6	+	908	7	FSM	ENSG00000204435.15	ENST00000375865.6	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	417.786395448945	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	158	False	NA	17	True	AATAAA	-20	NA	31666291	31670070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31666397_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_119037.known	chr6	-	1800	4	FSM	ENSG00000204438.11	ENST00000375895.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	64.5101197918246	1810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	9	True	NA	-8	True	AATAAA	-28	NA	31665850	31662075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665573
transcript_119038.known	chr6	-	2793	4	FSM	ENSG00000204438.11	ENST00000375906.5	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	74.7187318474349	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCTACACTTTTCTTT	2319	False	NA	NA	False	TTTAAA	-17	NA	31666283	31661228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665860
transcript_119043.known	chr6	-	1814	4	FSM	ENSG00000204438.11	ENST00000375900.8	1814	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	65.1272259163213	1797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-2	True	NA	-8	True	AATAAA	-28	NA	31665861	31662075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31662711_31663852_31664581_31664840_31665004_31665573
transcript_119057.known	chr6	+	929	7	FSM	ENSG00000204435.15	ENST00000375882.7	929	7	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_6	58.7038234605625	8552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGTCTGCTGGTGCT	-11	True	NA	14	True	AATAAA	-17	NA	31666079	31670067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_119059.nnic	chr6	-	1054	3	NNC	ENSG00000204428.12	novel	950	4	NA	NA	-153	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTATGTCTCTTTCTTCTG	NA	False	NA	-1	True	AATAAA	-18	NA	31681629	31676683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_31677121_31679100_31679269_31681180
transcript_119060.known	chr6	-	836	3	FSM	ENSG00000204428.12	ENST00000474395.5	836	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTAAACTGTTTGGT	-16	True	NA	-17	True	AATAAA	-2	NA	31681476	31676699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31677121_31679100_31679269_31681229
transcript_119062.known	chr6	-	2260	20	FSM	ENSG00000204427.12	ENST00000492084.5	2260	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_19	60.8591762611034	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	250	False	NA	-8	True	AATAAA	-18	NA	31703073	31686958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31702611
transcript_119063.nic	chr6	-	1867	18	NIC	ENSG00000204427.12	novel	1892	19	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	59.6438100983244	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	-19	True	NA	-8	True	AATAAA	-18	NA	31703342	31686958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
transcript_119069.known	chr6	+	523	3	FSM	ENSG00000244355.8	ENST00000375824.1	523	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	9	False	NA	NA	False	NA	NA	NA	31715355	31717804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31715411_31715501_31715625_31717459
transcript_119070.known	chr6	+	402	3	FSM	ENSG00000244355.8	ENST00000375825.8	525	3	8	115	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	9	False	NA	NA	False	NA	NA	NA	31715355	31717804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31715411_31715501_31715625_31717580
transcript_119071.known	chr6	+	493	2	FSM	ENSG00000244355.8	ENST00000479334.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	9	False	NA	NA	False	NA	NA	NA	31715355	31717804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31715625_31717580
transcript_119072.known	chr6	-	1977	20	FSM	ENSG00000204427.12	ENST00000395952.8	1977	20	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_17	23.2023496756452	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATTGTATAACTTCTC	-1	True	NA	-4	True	AATAAA	-22	NA	31703324	31686954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
transcript_119073.known	chr6	-	1892	19	FSM	ENSG00000204427.12	ENST00000495769.5	1892	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	61.8619779912319	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTAATAAAAAGGTAT	-17	True	NA	-38	True	NA	NA	NA	31703340	31686988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702073_31702131_31703149
transcript_119081.known	chr6	-	1261	7	FSM	ENSG00000213722.10	ENST00000436437.2	1261	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	241.668793094093	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	3	True	NA	-5	True	AATAAA	-20	NA	31729501	31727037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729361
transcript_119084.known	chr6	-	1254	6	FSM	ENSG00000213719.8	ENST00000375784.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	3	2724	junction_2	248.024514917377	18455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	1487	False	NA	-5	True	AATAAA	-33	NA	31736567	31730580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
transcript_119087.known	chr6	-	1560	7	FSM	ENSG00000213719.8	ENST00000375780.6	1560	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1122.54528490688	6802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	736	False	NA	-5	True	AATAAA	-33	NA	31737318	31730580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736795
transcript_119090.known	chr6	-	1127	7	FSM	ENSG00000213719.8	ENST00000375779.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	1117.070573718	7155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	1482	False	NA	-5	True	AATAAA	-33	NA	31736572	31730580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736413_31736544
transcript_119093.known	chr6	-	937	6	FSM	ENSG00000213722.10	ENST00000480913.5	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	236.635077704046	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	10	True	NA	-5	True	AATAAA	-20	NA	31730227	31727037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31730050
transcript_119105.known	chr6	+	796	5	FSM	ENSG00000204410.16	ENST00000463094.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.41774882649672	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAAGGCACTGCCTCAG	13	True	NA	NA	False	NA	NA	NA	31740004	31743480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107
transcript_119107.known	chr6	-	898	5	FSM	ENSG00000213722.10	ENST00000483792.1	898	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	310.52576382645	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-25	True	NA	-5	True	AATAAA	-20	NA	31730262	31727037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728645_31728746_31730050
transcript_119119.known	chr6	-	1193	6	FSM	ENSG00000213722.10	ENST00000375789.7	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_4	37.8597411507263	2480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCTGTGACTGGTGT	-17	True	NA	-7	True	AATAAA	-18	NA	31729299	31727039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864
transcript_119120.known	chr6	-	1235	7	FSM	ENSG00000213722.10	ENST00000416410.6	1235	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	231.714383575029	2574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	7	True	NA	-5	True	AATAAA	-20	NA	31729796	31727037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729682
transcript_119121.known	chr6	-	1682	4	FSM	ENSG00000213722.10	ENST00000469963.5	1682	4	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_2	9.7410927974683	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-3	True	NA	-5	True	AATAAA	-20	NA	31729507	31727037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728746_31728864
transcript_119122.known	chr6	-	1098	7	FSM	ENSG00000213719.8	ENST00000616760.1	1098	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_6	1084.24705056858	10598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGGATTTAAAGTGTGG	-18	True	NA	-7	True	AATAAA	-31	NA	31736545	31730582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736482
transcript_119123.known	chr6	+	916	5	FSM	ENSG00000228727.9	ENST00000415669.3	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	7.29297607290741	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGTTTGTTTCTCAT	7694	False	NA	34	True	AATAAA	-38	NA	31762995	31764851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31763169_31763414_31763556_31764063_31764160_31764265_31764356_31764435
transcript_119124.known	chr6	-	4111	30	FSM	ENSG00000204394.13	ENST00000375663.8	4111	30	0	0	0	0	multi-exon	TRUE	canonical	3	531	junction_25	88.5488102431736	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTGTCGTCTGTGGTG	-53	True	NA	-1	True	AATAAA	-17	NA	31795752	31777517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
transcript_119126.known	chr6	-	767	5	FSM	ENSG00000204392.11	ENST00000493387.5	767	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	424.092265904485	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8947	False	NA	-6	True	AATAAA	-15	NA	31806660	31797395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806122_31806518
transcript_119128.nnic	chr6	-	717	5	NNC	ENSG00000204392.11	novel	820	5	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	409.924611971519	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8874	False	NA	-6	True	AATAAA	-15	NA	31806733	31797395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806662
transcript_119129.known	chr6	-	858	5	FSM	ENSG00000204392.11	ENST00000375661.6	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_3	61.9213210453395	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-2	True	NA	-6	True	AATAAA	-15	NA	31806966	31797395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
transcript_11913.known	chr1	-	1590	12	FSM	ENSG00000143156.14	ENST00000472647.5	1590	12	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_11	106.645082182532	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	0	True	NA	NA	False	AATAAA	-18	NA	169367946	169132530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324470_169367707
transcript_119130.known	chr6	-	641	4	FSM	ENSG00000204392.11	ENST00000470083.5	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	444.697899952566	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	24	True	NA	-6	True	AATAAA	-15	NA	31806817	31797395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806754
transcript_119132.known	chr6	-	713	4	FSM	ENSG00000204392.11	ENST00000470086.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	468.175892872184	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-11	True	NA	-6	True	AATAAA	-15	NA	31806852	31797395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31806074_31806143_31806754
transcript_119135.known	chr6	-	767	3	FSM	ENSG00000204392.11	ENST00000477182.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	520	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-2	True	NA	-6	True	AATAAA	-15	NA	31806966	31797395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31806074_31806143_31806754
transcript_119136.known	chr6	-	820	5	FSM	ENSG00000204392.11	ENST00000491421.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	424.092265904485	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	8948	False	NA	-6	True	AATAAA	-15	NA	31806659	31797395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806485
transcript_119137.known	chr6	-	2762	2	FSM	ENSG00000204390.10	ENST00000375654.5	2762	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTTCATGAACTCA	-18	True	NA	0	True	ATTAAA	-18	NA	31815283	31809618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31811986_31814888
transcript_119138.known	chr6	+	2400	1	FSM	ENSG00000204389.10	ENST00000375651.7	2400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	823	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCCTTTTATTCCTTT	0	True	NA	14	True	AATAAA	-14	NA	31815542	31817942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31815500_31817900
transcript_119150.known	chr6	+	602	4	FSM	ENSG00000204387.14	ENST00000375641.6	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	271.146127064766	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	12	True	NA	16	True	AATAAA	-16	NA	31834626	31839761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31834769_31835410_31835452_31837235_31837436_31839542
transcript_119152.known	chr6	+	610	4	FSM	ENSG00000204387.14	ENST00000375635.6	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	260.750625864808	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	293	False	NA	16	True	AATAAA	-16	NA	31834907	31839761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835058_31835410_31835452_31837235_31837436_31839542
transcript_119156.known	chr6	+	712	3	FSM	ENSG00000204387.14	ENST00000648677.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	337	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	293	False	NA	16	True	AATAAA	-16	NA	31834907	31839761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835201_31837235_31837436_31839542
transcript_119157.known	chr6	+	2517	1	FSM	ENSG00000204388.7	ENST00000375650.5	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTGTTAATATGTG	-1	True	NA	9	True	AATAAA	-13	NA	31827737	31830254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31827700_31830300
transcript_119158.known	chr6	+	847	5	FSM	ENSG00000204387.14	ENST00000375638.7	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	236.845941489399	2093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	293	False	NA	16	True	AATAAA	-16	NA	31834907	31839761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835201_31835410_31835452_31836423_31836518_31837235_31837436_31839542
transcript_119159.known	chr6	+	748	4	FSM	ENSG00000204387.14	ENST00000614363.4	748	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	275.691050916702	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTTTGGTCTCAGAACA	2	True	NA	21	True	AATAAA	-21	NA	31834921	31839766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835201_31835410_31835456_31837235_31837436_31839542
transcript_119160.known	chr6	+	586	3	FSM	ENSG00000204387.14	ENST00000375633.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	172.5	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGGTTTGGTCTCAGAA	21	False	NA	19	True	AATAAA	-19	NA	31835287	31839764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835452_31837235_31837436_31839542
transcript_119161.known	chr6	+	952	5	FSM	ENSG00000204387.14	ENST00000395789.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	258.944009391992	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	12	False	NA	16	True	AATAAA	-16	NA	31834931	31839761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835201_31835410_31835452_31836294_31836518_31837235_31837436_31839542
transcript_119162.known	chr6	-	2585	21	FSM	ENSG00000204385.13	ENST00000229729.11	2585	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	3.2649655434629	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTCATTCTCTCCA	0	True	NA	-22	True	ATTAAA	-23	NA	31878997	31863191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874720_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
transcript_119163.known	chr6	-	2505	20	FSM	ENSG00000204385.13	ENST00000375562.8	2505	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	3.97777760582972	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTGACTCATTCTCT	2141	False	NA	-25	True	ATTAAA	-20	NA	31879046	31863194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
transcript_119166.known	chr6	-	3965	28	FSM	ENSG00000204371.11	ENST00000375537.8	3965	28	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_19	120.153297145001	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	7	True	NA	NA	False	AATAAA	-20	NA	31897684	31879758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884911_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31896262_31896517_31896605_31896825_31896922_31896990_31897635
transcript_119170.known	chr6	-	1517	9	FSM	ENSG00000204371.11	ENST00000478491.5	1517	9	0	0	0	0	multi-exon	TRUE	canonical	3	823	junction_7	75.1880974622978	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	7747	False	NA	NA	False	AATAAA	-20	NA	31884806	31879758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644
transcript_119171.known	chr6	-	3940	26	FSM	ENSG00000204371.11	ENST00000480912.5	3940	26	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_25	287.38165842656	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	5573	False	NA	NA	False	AATAAA	-20	NA	31896504	31879758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31893361_31893663_31896262
transcript_119172.known	chr6	-	1454	4	FSM	ENSG00000204371.11	ENST00000465429.1	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_3	89.7118845093682	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAGAT	4	True	NA	NA	False	NA	NA	NA	31897687	31895400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31896517_31896605_31896825_31896922_31896990_31897635
transcript_119183.known	chr6	-	1445	11	FSM	ENSG00000204356.14	ENST00000375429.8	1445	11	0	0	0	0	multi-exon	TRUE	canonical	3	637	junction_10	94.5640523666367	6130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTCGCAGCTGTTTT	-13	True	NA	-3	True	NA	NA	NA	31958971	31952086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_119184.known	chr6	-	1543	10	FSM	ENSG00000204356.14	ENST00000481121.5	1543	10	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_9	99.4109813344408	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-4	True	NA	-30	True	AGTAAA	-20	NA	31958962	31952227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_119185.known	chr6	-	1075	10	FSM	ENSG00000204356.14	ENST00000441998.5	1075	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	246.518023281198	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGCAAGTCTGTCTGGG	1	True	NA	NA	False	AAAACA	-19	NA	31958957	31953757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31953832_31954079_31954135_31954297_31954443_31954554_31954878_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_119186.known	chr6	-	1786	9	FSM	ENSG00000204356.14	ENST00000492185.5	1786	9	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_8	100.639129442777	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCCCTCAGCCTCTGG	NA	False	NA	-29	True	AGTAAA	-21	NA	31959038	31952226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_119187.known	chr6	+	3795	28	FSM	ENSG00000204351.12	ENST00000375394.7	3795	28	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	19.3224746006136	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	17	True	NA	21	True	GATAAA	-9	NA	31959174	31969751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279_31969421_31969514
transcript_119193.known	chr6	+	1557	8	FSM	ENSG00000204344.16	ENST00000375333.3	1557	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.1086794925248	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	146	False	NA	NA	False	AATAAA	-17	NA	31971943	31981446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972217_31972301_31972512_31972620_31972758_31978902_31979011_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_119194.known	chr6	-	1667	7	FSM	ENSG00000204348.10	ENST00000375349.7	1667	7	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_6	40.4162371111194	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCGCTGTCTTCTTAG	6	True	NA	-3	True	AATAAA	-18	NA	31972290	31969812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971726_31971928
transcript_119203.known	chr6	-	1115	7	FSM	ENSG00000204348.10	ENST00000474587.1	1115	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	56.5226110114842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCATATGGTATGTGGAA	7	True	NA	NA	False	NA	NA	NA	31972098	31969947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971140_31971319_31971582_31971928
transcript_119205.known	chr6	-	1346	7	FSM	ENSG00000204348.10	ENST00000480240.5	1346	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	49.6199444668058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCCCAAGACTCCCTC	9	True	NA	-97	True	NA	NA	NA	31972136	31969906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971148_31971319_31971726_31971928
transcript_119209.known	chr6	-	1469	7	FSM	ENSG00000204348.10	ENST00000337523.10	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	21.1220001157298	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTCGCTGTCTTCTT	7	True	NA	-5	True	AATAAA	-16	NA	31972138	31969814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971682_31971928
transcript_119212.known	chr6	+	1039	6	FSM	ENSG00000204344.16	ENST00000483801.6	1039	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	35.9888871736818	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCTGCCTGTGATAT	23	True	NA	NA	False	NA	NA	NA	31972380	31981429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972512_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_119214.known	chr6	+	1006	6	FSM	ENSG00000204344.16	ENST00000469907.1	1006	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.4187118965899	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATGTGACTGCTGCTGT	5	True	NA	NA	False	NA	NA	NA	31972581	31981189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972920_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_119216.known	chr6	-	1132	6	FSM	ENSG00000204348.10	ENST00000478221.5	1132	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	55.2941226533164	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTCTCTCGCTGTCTTC	4	True	NA	-7	True	AATAAA	-14	NA	31972238	31969816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971148_31971928
transcript_119233.known	chr6	-	1533	6	FSM	ENSG00000204348.10	ENST00000375356.7	1533	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	22.2207110597298	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGCAGATAATAAAAGCATA	0	True	NA	-34	True	NA	NA	NA	31971984	31969843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319
transcript_119234.known	chr6	+	517	5	FSM	ENSG00000204344.16	ENST00000466336.5	517	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	28.6400069832394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCGGGCGCCTGTCGTGGT	39	True	NA	NA	False	NA	NA	NA	31972396	31980724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972512_31972620_31972758_31978902_31978999_31980450_31980549_31980653
transcript_119235.known	chr6	+	1128	6	FSM	ENSG00000204344.16	ENST00000491861.5	1128	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	17.6680502602862	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	-22	True	NA	NA	False	AATAAA	-17	NA	31972554	31981446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_119236.known	chr6	-	2626	18	FSM	ENSG00000213676.13	ENST00000375203.8	2626	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	16.7499418993983	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGCTGCCTTCCTGGCT	-23	True	NA	-2	True	AATAAA	-24	NA	32128246	32115263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_119237.known	chr6	-	2532	18	FSM	ENSG00000213676.13	ENST00000453203.2	2532	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	21.5376069262749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGGGGTGGGGGGGAGT	6	True	NA	-90	True	NA	NA	NA	32128217	32115351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117131_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_11924.known	chr1	-	1472	12	FSM	ENSG00000143156.14	ENST00000367811.8	1472	12	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_7	38.6030872743028	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-11	True	NA	NA	False	AATAAA	-18	NA	169367797	169132530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_119241.known	chr6	-	1176	8	FSM	ENSG00000213676.13	ENST00000495579.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	8.66614336463034	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAATAAAAATAAAAA	1	True	NA	NA	False	AAAAAG	-13	NA	32128222	32120441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_119242.nic	chr6	-	1338	7	NIC	ENSG00000213676.13	novel	1176	8	NA	NA	-31	14	intron_retention	FALSE	canonical	3	68	junction_6	9.29904415637555	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATTAATTAATTAATT	1981	False	NA	NA	False	AATAAA	-3	NA	32128284	32120427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_119245.nic	chr6	-	1470	6	NIC	ENSG00000213676.13	novel	1176	8	NA	NA	-31	8	intron_retention	FALSE	canonical	3	68	junction_5	9.43610088966836	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAAAAATTAATTAA	1981	False	NA	NA	False	AAAAAG	-21	NA	32128284	32120433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_119247.known	chr6	-	1342	2	FSM	ENSG00000204315.4	ENST00000375156.4	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACTTGTGAATTGTGG	-23	True	NA	-12	True	ATTAAA	-20	NA	32130288	32128706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32129855_32130094
transcript_11925.known	chr1	-	1678	13	FSM	ENSG00000143156.14	ENST00000525440.5	1678	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	139.085305558216	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTGACTTTGGTTTA	0	True	NA	NA	False	AATAAA	-12	NA	169367946	169132536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169132818_169169446_169169555_169190642_169190706_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_119257.known	chr6	+	1759	9	FSM	ENSG00000221988.13	ENST00000361568.6	1759	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	50.5184062990906	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	-21	True	NA	18	True	AATAAA	-18	NA	32153522	32163678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32153637_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_119259.known	chr6	+	1906	9	FSM	ENSG00000221988.13	ENST00000324816.11	1906	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	45.4049487941568	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	-36	True	NA	15	True	AATAAA	-15	NA	32154140	32163675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_11926.known	chr1	+	2216	6	FSM	ENSG00000143153.14	ENST00000367815.9	2216	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	12.4	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTGTGTGATTCACT	-2	True	NA	13	True	AATAAA	-13	NA	169106689	169132719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169106927_169111369_169111499_169124883_169125040_169127223_169127409_169130009_169130091_169131291
transcript_119262.known	chr6	+	1754	9	FSM	ENSG00000221988.13	ENST00000375143.6	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	66.392300005347	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	-39	True	NA	18	True	AATAAA	-18	NA	32154137	32163678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32154247_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_11927.nic	chr1	+	2739	7	NIC	ENSG00000117475.14	novel	2524	7	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	37.4940736057788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	26	True	NA	25	True	AATAAA	-18	NA	169367999	169388305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_169368363_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
transcript_119278.known	chr6	-	2017	7	FSM	ENSG00000204310.13	ENST00000375104.6	2017	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	159.449835371505	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	15	True	NA	-30	True	AATAAA	-13	NA	32177325	32168211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32177233
transcript_119279.known	chr6	-	2021	7	FSM	ENSG00000204310.13	ENST00000336984.6	2021	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	180.795848649489	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	2	True	NA	-30	True	AATAAA	-13	NA	32178096	32168211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32178000
transcript_119288.nic	chr6	+	806	4	ISM	ENSG00000241404.7	ENST00000395512.5	1312	9	2453	0	-485	0	3prime_fragment	FALSE	canonical	3	26	junction_2	22.5289936649544	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	-13	True	NA	15	True	AATAAA	-17	NA	32167057	32168281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_32167258_32167349_32167430_32167502_32167657_32167909
transcript_119292.known	chr6	-	2782	3	FSM	ENSG00000204314.12	ENST00000495191.5	2782	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	7.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCCGCAATTCCAAAGAC	2	True	NA	-31	True	ATTAAA	-18	NA	32151923	32148358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32149399_32149536_32149723_32150367
transcript_119294.known	chr6	-	567	3	FSM	ENSG00000284954.1	ENST00000485392.5	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	31	True	NA	-5	True	AATAAA	-19	NA	32154333	32152801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153173_32153736_32153837_32154237
transcript_119295.known	chr6	-	548	3	FSM	ENSG00000284954.1	ENST00000498575.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	-1	True	NA	-5	True	AATAAA	-19	NA	32154365	32152801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153173_32153736_32153837_32154288
transcript_119296.known	chr6	-	493	3	FSM	ENSG00000284954.1	ENST00000494332.5	493	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGACACCCTAGTGCCTCA	25	True	NA	NA	False	NA	NA	NA	32154339	32153339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153660_32153765_32153837_32154237
transcript_119299.known	chr6	-	543	2	FSM	ENSG00000284954.1	ENST00000497552.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	456	False	NA	-5	True	AATAAA	-19	NA	32153908	32152801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153173_32153736
transcript_119300.known	chr6	+	1298	9	FSM	ENSG00000241404.7	ENST00000333845.11	1298	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	21.3834047803431	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	-6	True	NA	15	True	AATAAA	-17	NA	32164594	32168281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32164658_32166137_32166267_32166497_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
transcript_119301.known	chr6	+	1312	9	FSM	ENSG00000241404.7	ENST00000395512.5	1312	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.7509101780889	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTCCCACCCTCTCCTT	4	True	NA	15	True	AATAAA	-17	NA	32164604	32168281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32164682_32166137_32166267_32166497_32166621_32166700_32166811_32166909_32167006_32167086_32167258_32167349_32167430_32167502_32167657_32167909
transcript_119302.known	chr6	-	2496	7	FSM	ENSG00000204310.13	ENST00000395499.5	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	142.577951388783	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	16	True	NA	-30	True	AATAAA	-13	NA	32177080	32168211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32176509
transcript_119303.known	chr6	-	2196	7	FSM	ENSG00000204310.13	ENST00000375107.8	2196	7	0	0	0	0	multi-exon	TRUE	canonical	3	333	junction_6	62.5639672655115	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	13	True	NA	-30	True	AATAAA	-13	NA	32176084	32168211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32175813
transcript_119304.known	chr6	-	2448	5	FSM	ENSG00000204310.13	ENST00000490711.5	2448	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	217.638461674402	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-2	True	NA	-30	True	AATAAA	-13	NA	32177342	32168211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32171296_32171506_32176509
transcript_119316.known	chr6	+	1117	6	FSM	ENSG00000204308.8	ENST00000375094.4	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_4	187.527704619877	8970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGGATCTCTTCCCAA	-17	True	NA	14	True	AATAAA	-15	NA	32178404	32180793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32178652_32179540_32179560_32179650_32179764_32179876_32179932_32180008_32180127_32180228
transcript_119317.known	chr6	+	357	3	FSM	ENSG00000204308.8	ENST00000487940.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	1406	junction_1	169.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTGTTGCTTAGGGAAG	15	True	NA	NA	False	NA	NA	NA	32178436	32179773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32178652_32179540_32179560_32179650
transcript_119318.known	chr6	-	557	2	FSM	ENSG00000204305.16	ENST00000469940.5	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGTCTGTGTGTGT	8879	False	NA	-7	True	ATTAAA	-18	NA	32181635	32180967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32181240_32181350
transcript_119319.known	chr6	-	3229	9	FSM	ENSG00000204304.12	ENST00000375050.6	3229	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	4.35710626448334	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	-10	True	NA	-3	True	AATAAA	-22	NA	32190202	32184732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32186475_32186603_32186691_32186812_32186902_32187241_32187396_32187646_32187783_32187965_32188157_32188256_32188505_32188722_32188797_32189694
transcript_119322.known	chr6	-	662	2	FSM	ENSG00000273333.2	ENST00000559458.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	9654	False	NA	-3	True	AATAAA	-22	NA	32185882	32184732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32184836_32185323
transcript_119323.known	chr6	-	1456	8	FSM	ENSG00000213654.10	ENST00000375043.3	1456	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	47.9544852236079	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	884	False	NA	0	True	AATAAA	-18	NA	32195523	32190765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471_32192531_32193040_32193125_32194309_32194391_32194736_32194830_32195425
transcript_119324.known	chr6	-	1417	4	FSM	ENSG00000213654.10	ENST00000472768.5	1417	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	44.0302926025556	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	8	True	NA	0	True	AATAAA	-18	NA	32192885	32190765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32191504_32191708_32191871_32192147_32192251_32192471
transcript_119325.known	chr6	-	1213	4	FSM	ENSG00000213654.10	ENST00000375040.8	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	4.08248290463863	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	8	True	NA	0	True	AATAAA	-18	NA	32192643	32190765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471
transcript_119326.nnic	chr6	-	1110	3	NIC	ENSG00000213654.10	novel	1213	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	51	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	8	True	NA	0	True	AATAAA	-18	NA	32192643	32190765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_32191504_32191708_32191909_32192471
transcript_119327.nic	chr6	-	1754	3	NIC	ENSG00000213654.10	novel	1417	4	NA	NA	-60	0	intron_retention	FALSE	canonical	3	92	junction_2	5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	3462	False	NA	0	True	AATAAA	-18	NA	32192945	32190765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_32191504_32191708_32192251_32192471
transcript_119328.known	chr6	-	1460	4	FSM	ENSG00000213654.10	ENST00000487761.5	1460	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	46.4781908234628	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	25	True	NA	0	True	AATAAA	-18	NA	32192868	32190765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192273_32192471
transcript_119336.nic	chr6	+	1490	3	NIC	ENSG00000225914.4	novel	1216	4	NA	NA	175	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCGCTTGGATCGGAAA	NA	False	NA	17	True	AATAAA	-30	NA	32254815	32391963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_32255415_32390213_32390754_32391612
transcript_119337.nnic	chr6	+	1476	3	NNC	ENSG00000225914.4	novel	1216	4	NA	NA	175	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTCGCTTGGATCGG	NA	False	NA	14	True	AATAAA	-27	NA	32254815	32391960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_32255415_32390213_32390754_32391623
transcript_119340.known	chr6	+	2125	3	FSM	ENSG00000225914.4	ENST00000653922.1	2125	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTATAGATGATACATAATT	NA	False	NA	-1	True	AATAAA	-12	NA	32255081	32391945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32255415_32365779_32365840_32390213
transcript_119343.known	chr6	+	1235	5	FSM	ENSG00000204287.14	ENST00000395388.7	1235	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.54950975679639	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGTTTAAGCCAGT	-6	True	NA	27	True	AATAAA	-25	NA	32439886	32445046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32440033_32442447_32442694_32443184_32443467_32443755_32443922_32444651
transcript_119345.known	chr6	+	1169	5	FSM	ENSG00000204287.14	ENST00000374982.5	1169	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.34428877022476	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGTTTAAGCCAGT	-15	True	NA	27	True	AATAAA	-25	NA	32439877	32445046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32440033_32442447_32442694_32443259_32443467_32443755_32443922_32444651
transcript_119346.known	chr6	-	715	5	FSM	ENSG00000229391.7	ENST00000437650.2	715	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCACATGACCACATTCA	8890	False	NA	NA	False	NA	NA	NA	32558186	32553045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32553073_32553375_32553400_32553855_32553967_32554689_32554972_32557915
transcript_119352.known	chr6	-	1229	6	FSM	ENSG00000196126.11	ENST00000360004.5	1229	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	29.7563438614357	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	-5	True	NA	-27	True	ATTAAA	-24	NA	32589848	32578768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32589642
transcript_119354.known	chr6	+	1574	5	FSM	ENSG00000196735.13	ENST00000343139.11	1574	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAATTTATGAAGAATG	1	True	NA	112	True	AGTAAA	-16	NA	32637405	32643684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32637541_32641309_32641559_32641971_32642254_32642609_32642785_32642951
transcript_119357.known	chr6	-	1642	5	FSM	ENSG00000179344.17	ENST00000434651.7	1605	5	-37	0	-10	0	multi-exon	FALSE	canonical	3	12	junction_4	1.11803398874989	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAAGCCCAAATATAT	-19	True	NA	-2	True	AATAAA	-22	NA	32666694	32659466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32660250_32661346_32661458_32661966_32662249_32664797_32665068_32666498
transcript_119359.known	chr6	-	5643	12	FSM	ENSG00000204267.17	ENST00000374897.4	5643	12	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	3.19348510368187	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGAAGTTCCATATT	26	True	NA	-4	True	ATTAAA	-25	NA	32838739	32825414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
transcript_119362.known	chr6	-	2685	11	FSM	ENSG00000168394.12	ENST00000354258.5	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	17.6694651871527	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTTCTTATGTTTCC	9	True	NA	-5	True	AATAAA	-15	NA	32853704	32845208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32845786_32847067_32847205_32847512_32847676_32847918_32848093_32848651_32848841_32848989_32849119_32850319_32850518_32850943_32851150_32852108_32852240_32852387_32852503_32853038
transcript_119365.known	chr6	+	1017	6	FSM	ENSG00000240065.8	ENST00000374859.3	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.77174369109018	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTGATGGGACTCTTT	3	True	NA	NA	False	NA	NA	NA	32854191	32859851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32854290_32856137_32856206_32857262_32857395_32858004_32858135_32858363_32858506_32859404
transcript_119367.nnic	chr6	-	1142	6	NNC	ENSG00000204264.12	novel	1124	6	NA	NA	158	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	73.3784709570866	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	9971	False	NA	NA	False	AATAAA	-19	NA	32843859	32840716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32843643
transcript_119369.known	chr6	+	1015	2	FSM	ENSG00000204261.9	ENST00000412095.1	1015	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCCTGCTCCACCAGGC	13	False	NA	NA	False	NA	NA	NA	32844133	32845695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32844871_32845417
transcript_11937.nic	chr1	-	1891	6	NIC	ENSG00000117477.13	novel	1917	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	24.5324275195098	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-14	True	NA	0	True	AATAAA	-23	NA	169427468	169394869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424931_169427287
transcript_119370.known	chr6	+	1623	3	FSM	ENSG00000204261.9	ENST00000458296.2	1623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGAGGATGGTCTTTT	18	False	NA	-5	True	AATAAA	-4	NA	32844107	32846484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32844275_32844569_32844871_32845329
transcript_119371.known	chr6	-	1124	6	FSM	ENSG00000204264.12	ENST00000374882.8	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	46.6021458733394	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-23	True	NA	NA	False	AATAAA	-19	NA	32844047	32840716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32843849
transcript_119372.known	chr6	-	1327	6	FSM	ENSG00000204264.12	ENST00000374881.3	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	43.5642054902876	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-12	True	NA	NA	False	AATAAA	-19	NA	32844679	32840716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32844278
transcript_119373.known	chr6	+	2676	3	FSM	ENSG00000240065.8	ENST00000464863.1	2676	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTGGGCATAGTGGT	-3	True	NA	NA	False	AATAAA	-17	NA	32854147	32858900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32854290_32856137_32858135_32858363
transcript_119374.known	chr6	+	1338	2	FSM	ENSG00000204261.9	ENST00000415067.2	1338	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTTTTCCTTATGTT	11	False	NA	4	True	AATAAA	-13	NA	32844100	32846493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32844275_32845329
transcript_119375.known	chr6	+	1272	2	FSM	ENSG00000204261.9	ENST00000453426.2	1272	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTATGTTTCGCTTT	-4	True	NA	11	True	AATAAA	-20	NA	32844085	32846500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32844275_32845417
transcript_119377.nnic	chr6	+	1651	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-614	0	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	152	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCACAAAGAGTGAACCCT	NA	False	NA	13	True	AATAAA	-19	NA	32894145	32901788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_32894928_32900919
transcript_119378.nnic	chr6	+	1895	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-614	244	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	173	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATGATTGCCTTTTTAT	NA	False	NA	33	True	TATAAA	-29	NA	32894145	32902032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_32894928_32900919
transcript_119379.nnic	chr6	+	2023	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-614	372	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	172	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTACCTTGAATTTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	32894145	32902160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_32894928_32900919
transcript_11938.known	chr1	-	1860	6	FSM	ENSG00000117477.13	ENST00000367806.8	1917	6	57	0	45	0	multi-exon	TRUE	canonical	0	0	junction_5	24.5324275195098	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-2	True	NA	0	True	AATAAA	-23	NA	169427417	169394869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424951_169427287
transcript_119380.nnic	chr6	+	3028	2	NNC	ENSG00000289047.1	novel	1136	2	NA	NA	-22	1969	at_least_one_novel_splicesite	FALSE	canonical	3	175	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTCTTTTTCTTCCTCTT	-21	True	NA	18	True	AATAAA	-15	NA	32894737	32903757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_32894928_32900919
transcript_119381.known	chr6	+	4834	14	FSM	ENSG00000204256.14	ENST00000482914.5	4834	14	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	207.004101951754	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTAGAAGTAATCTTTA	16	True	NA	20	True	AATAAA	-25	NA	32970952	32981505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975020_32975113_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_119382.known	chr6	+	4956	13	FSM	ENSG00000204256.14	ENST00000374825.9	4956	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	163.050839890167	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	-5	True	NA	16	True	AATAAA	-21	NA	32968593	32981501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32969057_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_119383.known	chr6	+	4579	13	FSM	ENSG00000204256.14	ENST00000449085.4	4579	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	165.836494944736	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTCCTTAGAAGTAATC	10	False	NA	16	True	AATAAA	-21	NA	32969266	32981501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32969353_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_119384.known	chr6	+	4807	13	FSM	ENSG00000204256.14	ENST00000374831.8	4807	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	157.997077152993	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTTAGAAGTAATCTTTA	642	False	NA	20	True	AATAAA	-25	NA	32970887	32981505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32971198_32971594_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125_32978389_32979827_32980133_32980341_32980465_32980581
transcript_119391.known	chr6	-	1348	6	FSM	ENSG00000242574.9	ENST00000418107.3	1348	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	4.16653333119993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTTTCCATGTCTTC	6	True	NA	-8	True	AATAAA	-13	NA	32941028	32934635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32934988_32935341_32935378_32935535_32935653_32937171_32937457_32938683_32938966_32940752
transcript_119400.known	chr6	-	1007	5	FSM	ENSG00000204257.15	ENST00000395303.7	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	53.625437061156	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	-43	True	NA	-16	True	AATAAA	-19	NA	32953108	32948612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949788_32950518_32950804_32952948
transcript_119407.known	chr6	-	1093	5	FSM	ENSG00000204257.15	ENST00000374843.9	1093	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	33.3504122913046	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-32	True	NA	-21	True	AATAAA	-14	NA	32953097	32948617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32952948
transcript_119408.nnic	chr6	-	1165	5	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_4	34.1686991265398	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	4699	False	NA	-21	True	AATAAA	-14	NA	32968567	32948617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32968346
transcript_119419.known	chr6	-	777	4	FSM	ENSG00000204257.15	ENST00000395305.7	777	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	63.3578899760892	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	4	True	NA	-16	True	AATAAA	-19	NA	32953061	32948612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32952948
transcript_119420.known	chr6	-	806	4	FSM	ENSG00000204257.15	ENST00000464392.1	806	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	64.2979177129572	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCTCTGGGACATC	4822	False	NA	NA	False	NA	NA	NA	32968444	32948770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32968144
transcript_119421.nnic	chr6	-	853	4	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	54.9019327731021	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	4726	False	NA	-21	True	AATAAA	-14	NA	32968540	32948617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_32948869_32949270_32949400_32949610_32949890_32968346
transcript_119423.known	chr6	-	1735	4	FSM	ENSG00000204257.15	ENST00000477541.1	1735	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	53.0178167118271	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	-43	True	NA	-16	True	AATAAA	-19	NA	32953108	32948612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949273_32949400_32949610_32950804_32952948
transcript_119429.nnic	chr6	-	563	3	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	-85	0	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_2	63.5	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	4737	False	NA	-21	True	AATAAA	-14	NA	32968529	32948617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_32948869_32949270_32949400_32968346
transcript_11943.nnic	chr1	-	1756	5	NIC	ENSG00000117477.13	novel	1914	6	NA	NA	-3	-9	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	28.8042965545073	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTAATGTGTTGTGCC	-23	True	NA	-9	True	AATAAA	-14	NA	169427477	169394878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_169395207_169419012_169419160_169421362_169422314_169424810_169424951_169427287
transcript_119432.known	chr6	+	2338	9	FSM	ENSG00000204256.14	ENST00000607833.5	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_5	47.6812332055286	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAAGAAACGGAA	17	False	NA	50	True	NA	NA	NA	32972216	32978203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125
transcript_119433.known	chr6	-	3464	5	FSM	ENSG00000204252.14	ENST00000229829.7	3464	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2.54950975679639	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGCTTTTTTTTTAC	1	True	NA	NA	False	ATTAAA	-21	NA	33009591	33004181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_119435.known	chr6	+	3991	6	FSM	ENSG00000223865.11	ENST00000418931.7	3991	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	69.3668508727332	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGGAGGACCTACTG	11	True	NA	10	True	AATAAA	-24	NA	33075989	33089696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33076142_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_119436.nic	chr6	+	1384	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-78	-187	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	44.0390735597378	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTCTCAGACCACTAT	4329	False	NA	NA	False	NA	NA	NA	33080307	33087014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_119437.nic	chr6	+	1139	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-78	-432	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	44.0390735597378	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGTTTGTTTTCCTT	4329	False	NA	20	True	NA	NA	NA	33080307	33086769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_119442.known	chr6	-	1704	6	FSM	ENSG00000231389.8	ENST00000419277.5	1704	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	11.6378692207809	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGCAATTTTTACCAG	2	True	NA	NA	False	AATAAA	-19	NA	33080710	33064568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073670_33080679
transcript_119447.known	chr6	+	1361	5	FSM	ENSG00000223865.11	ENST00000416804.1	1361	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.1444442390787	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCTTTGTGTGCCAT	211	False	NA	NA	False	CATAAA	-21	NA	33080671	33087201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33080936_33084949_33085232_33085778_33085907_33086218_33086243_33086538
transcript_119448.known	chr6	+	688	4	FSM	ENSG00000223865.11	ENST00000428835.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	76.524505878836	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAAGCCTGCAGGGTG	26	False	NA	NA	False	AAGAAA	-2	NA	33080486	33085889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33080535_33080688_33080936_33084949_33085232_33085778
transcript_11945.known	chr1	-	1652	4	FSM	ENSG00000117477.13	ENST00000491570.2	1652	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.1825107171668	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAACTATCAATTCGTT	-20	True	NA	NA	False	AATAAA	-40	NA	169427474	169418785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169419160_169421362_169422314_169424810_169424951_169427287
transcript_119456.known	chr6	+	1188	3	FSM	ENSG00000224557.8	ENST00000435074.6	1213	3	11	14	11	0	multi-exon	FALSE	canonical	0	0	junction_1	72.5	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	-7	True	NA	7	True	AATAAA	-17	NA	33112450	33119149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33112616_33116956_33117221_33118390
transcript_119461.nnic	chr6	+	1198	3	FSM	ENSG00000224557.8	ENST00000692641.1	727	3	-103	-368	-15	0	multi-exon	FALSE	canonical	3	28	junction_1	58.5	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	4183	False	NA	7	True	AATAAA	-17	NA	33116640	33119149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33116833_33116973_33117221_33118390
transcript_119470.nnic	chr6	+	1209	3	NIC	ENSG00000224557.8	novel	1092	3	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	55	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	-6	True	NA	7	True	AATAAA	-17	NA	33116646	33119149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_33116833_33116956_33117221_33118390
transcript_11948.known	chr1	-	1246	3	FSM	ENSG00000117477.13	ENST00000456107.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-8	True	NA	NA	False	AAGAAA	-24	NA	169427462	169421362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169422314_169424810_169424931_169427287
transcript_11949.nic	chr1	-	1281	3	ISM	ENSG00000117477.13	ENST00000491570.2	1652	4	-3	2577	-3	0	5prime_fragment	FALSE	canonical	0	0	junction_2	27.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-23	True	NA	NA	False	AAGAAA	-24	NA	169427477	169421362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_169422314_169424810_169424951_169427287
transcript_1195.nnic	chr1	+	1280	9	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	32.9990530167155	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-20	True	NA	22	True	AATAAA	-24	NA	6579993	6589280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_6580071_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_11950.known	chr1	+	2524	7	FSM	ENSG00000117475.14	ENST00000367808.8	2524	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	20.3278681179858	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	-22	True	NA	25	True	AATAAA	-18	NA	169368194	169388305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
transcript_119501.known	chr6	-	1194	5	FSM	ENSG00000204248.12	ENST00000395194.1	1194	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	5.04975246918104	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTGGGAGCTGTGT	8211	False	NA	NA	False	AATAAA	-19	NA	33192454	33186444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
transcript_119503.known	chr6	-	1977	9	FSM	ENSG00000204231.11	ENST00000483281.5	1977	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	24.8869318116959	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCAGATGGGGGCCTC	7807	False	NA	NA	False	NA	NA	NA	33200637	33194219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33194830_33194944_33195051_33195362_33195455_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33200241
transcript_119504.known	chr6	+	2153	8	FSM	ENSG00000112473.18	ENST00000374675.7	2153	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	60.8809477251986	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCTTTGTCTTTTTGG	0	True	NA	24	True	AATAAA	-24	NA	33200825	33204439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33200939_33201241_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_119508.known	chr6	+	2413	7	FSM	ENSG00000112473.18	ENST00000374677.8	2413	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_3	9.03081145609604	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	-27	True	NA	22	True	AATAAA	-22	NA	33200866	33204437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_11951.known	chr1	+	2300	8	FSM	ENSG00000117475.14	ENST00000329281.6	2300	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	39.8353755204735	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAGGAAGGAAGA	-4	True	NA	NA	False	NA	NA	NA	169367969	169396540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996_169387210_169395893
transcript_119515.known	chr6	+	977	9	FSM	ENSG00000204228.4	ENST00000374662.4	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	7.17635004720366	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTCTTCTTGTGTC	-2	True	NA	34	True	AATAAA	-23	NA	33204654	33206831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33204721_33204901_33205120_33205220_33205338_33205446_33205540_33205639_33205726_33205827_33205913_33206133_33206177_33206374_33206450_33206637
transcript_11952.known	chr1	-	3612	6	FSM	ENSG00000117479.15	ENST00000236137.10	3612	6	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_4	23.1982757979984	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAAATTTATCTTCT	17	True	NA	4	True	AATAAA	-35	NA	169485944	169463908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169477154_169477758_169485562
transcript_119521.known	chr6	+	1741	7	FSM	ENSG00000204227.5	ENST00000374656.5	1741	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	16.303544263612	623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTGTGTGTCTG	-6	True	NA	23	True	NA	NA	NA	33208499	33212716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33208645_33208764_33208901_33209625_33209787_33209914_33210131_33211157_33211548_33211728_33212003_33212297
transcript_119525.known	chr6	-	2936	20	FSM	ENSG00000223501.9	ENST00000445902.3	2936	20	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_10	25.7484098425181	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-5	True	NA	-10	True	AATAAA	-18	NA	33271876	33250277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
transcript_119526.nic	chr6	-	2855	20	NIC	ENSG00000223501.9	novel	2936	20	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	58.2453022608439	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-29	True	NA	-10	True	AATAAA	-18	NA	33271900	33250277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271690
transcript_119535.known	chr6	-	2602	18	FSM	ENSG00000223501.9	ENST00000478934.5	2602	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	81.267893957179	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCATTTCCTTTCTCCTTC	4453	False	NA	-4	True	AATAAA	-24	NA	33272047	33250271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271904
transcript_119545.known	chr6	+	3121	3	FSM	ENSG00000232940.7	ENST00000669650.1	3121	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTTGTCTCAGTAAATA	NA	False	NA	NA	False	NA	NA	NA	33249533	33254261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33249890_33250608_33250712_33251599
transcript_119546.known	chr6	+	677	5	FSM	ENSG00000232940.7	ENST00000427196.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGTTGAAATAATAAT	16	True	NA	NA	False	NA	NA	NA	33249595	33254989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33249656_33249789_33249890_33250615_33250712_33251577_33251707_33254697
transcript_119552.known	chr6	+	589	6	FSM	ENSG00000231500.7	ENST00000474973.5	589	6	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_1	10175.6813118336	26832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	-1	True	NA	11	True	AATAAA	-19	NA	33272074	33276510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272586_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_119573.known	chr6	+	549	6	FSM	ENSG00000231500.7	ENST00000439602.7	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2623.01341208923	394498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTTCTGTCCAT	-1	True	NA	12	True	AATAAA	-20	NA	33272074	33276511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_119574.known	chr6	+	996	5	FSM	ENSG00000231500.7	ENST00000490191.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	21469	junction_4	2309.00058196181	5125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	56	False	NA	11	True	AATAAA	-19	NA	33272131	33276510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_119575.known	chr6	+	639	5	FSM	ENSG00000231500.7	ENST00000474626.5	639	5	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2901.36858870086	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	12	False	NA	6	True	AATAAA	-14	NA	33272087	33276505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276268_33276390
transcript_119576.known	chr6	+	642	5	FSM	ENSG00000231500.7	ENST00000496813.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	20916	junction_1	2520.66236334817	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	23	False	NA	6	True	AATAAA	-14	NA	33272098	33276505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175
transcript_119577.known	chr6	+	685	7	FSM	ENSG00000231500.7	ENST00000476222.5	685	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	11422.1853231138	3761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	20	False	NA	11	True	AATAAA	-19	NA	33272095	33276510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272627_33272727_33275499_33275658_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_119578.known	chr6	+	413	3	FSM	ENSG00000231500.7	ENST00000479802.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	3	21469	junction_2	1722.5	3613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	3790	False	NA	11	True	AATAAA	-19	NA	33275865	33276510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33276067_33276175_33276268_33276390
transcript_119581.known	chr6	+	1703	1	FSM	ENSG00000235863.4	ENST00000451237.3	1703	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGTGCAGTGTGGTCTT	0	True	NA	15	True	AATAAA	-15	NA	33277122	33278825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33277100_33278800
transcript_119582.known	chr6	-	2070	15	FSM	ENSG00000227057.10	ENST00000374617.9	2070	15	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_13	46.8133506162331	1116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	-19	True	NA	-10	True	ATTAAA	-21	NA	33289239	33279107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33279375_33279496_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_119584.known	chr6	-	2896	18	FSM	ENSG00000237441.10	ENST00000497454.6	2896	18	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_17	52.7407972588747	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-12	True	NA	-6	True	AATAAA	-23	NA	33298942	33291653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
transcript_11959.nic	chr1	+	3248	24	NIC	ENSG00000000460.17	novel	4011	25	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	47.8065968191932	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTAGTGAAAATAATCT	NA	False	NA	9	True	TATAAA	-18	NA	169794688	169853085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
transcript_119617.known	chr6	+	521	5	FSM	ENSG00000204220.12	ENST00000374610.6	521	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.257866844349	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGGAGGGGAGGGAAT	-13	True	NA	-47	True	GGGGCT	-33	NA	33289596	33290862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33289629_33289774_33289921_33290173_33290245_33290325_33290451_33290715
transcript_119619.known	chr6	+	884	5	FSM	ENSG00000204220.12	ENST00000395131.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	89.0347544501584	3302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	NA	False	NA	24	True	AATAAA	-17	NA	33289301	33290933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33289621_33289769_33289921_33290173_33290245_33290325_33290451_33290715
transcript_119624.known	chr6	+	805	4	FSM	ENSG00000204220.12	ENST00000395134.3	805	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	105.422957651548	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	-14	True	NA	-34	True	NA	NA	NA	33289595	33290875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325
transcript_119637.known	chr6	+	734	4	FSM	ENSG00000204220.12	ENST00000374606.10	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	23.1564725772779	6237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	-9	True	NA	24	True	AATAAA	-17	NA	33289600	33290933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33290715
transcript_119638.nic	chr6	-	904	3	ISM	ENSG00000231925.13	ENST00000437116.2	1239	5	-232	8746	-19	0	5prime_fragment	FALSE	canonical	3	271	junction_1	14.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTGCAGCTTGGCAG	8663	False	NA	NA	False	AAAACA	-4	NA	33314273	33313013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_33313478_33313693_33313865_33314004
transcript_119639.known	chr6	-	2462	9	FSM	ENSG00000204209.13	ENST00000620164.4	2462	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	347.60895324344	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGTCTTTTTCTTGTC	6275	False	NA	-1	True	AATAAA	-24	NA	33323016	33318558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33318803_33318996_33319050_33319201_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_119641.known	chr6	-	2606	8	FSM	ENSG00000204209.13	ENST00000266000.10	2606	8	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_7	238.4695248574	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	6281	False	NA	0	True	AATAAA	-25	NA	33323010	33318557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321975_33322861
transcript_119642.known	chr6	-	2558	8	FSM	ENSG00000204209.13	ENST00000374542.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_7	154.550434275333	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-23	True	NA	0	True	AATAAA	-25	NA	33322959	33318557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_119649.nic	chr6	-	1479	6	NIC	ENSG00000204209.13	novel	2606	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	110	junction_5	381.574946766687	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-35	True	NA	0	True	AATAAA	-25	NA	33322971	33318557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33322861
transcript_119658.known	chr6	-	498	1	FSM	ENSG00000204194.1	ENST00000374520.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	87	False	NA	NA	False	NA	NA	NA	33400556	33400058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33400100_33400600
transcript_119659.known	chr6	+	2391	11	FSM	ENSG00000237649.8	ENST00000428849.7	2391	11	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_3	25.1045812552211	981	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGATACTTTCATAT	-25	True	NA	45	True	AATAAA	-23	NA	33391822	33409896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409645
transcript_119663.known	chr6	+	1752	15	FSM	ENSG00000112511.18	ENST00000495509.6	1752	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_11	29.1761889217903	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGCAGTACCTGGTT	93	False	NA	NA	False	NA	NA	NA	33411125	33416051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33411216_33412247_33412423_33412507_33412590_33412697_33412794_33413195_33413297_33413408_33413558_33413735_33413832_33414040_33414110_33414242_33414367_33414476_33414545_33414724_33414830_33414965_33415145_33415234_33415330_33415589_33415671_33415809
transcript_11967.known	chr1	+	3727	23	FSM	ENSG00000000460.17	ENST00000459772.5	3727	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.5959612003132	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCATTGCTACATTTTT	18	True	NA	NA	False	AATAAA	-27	NA	169795078	169854080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169795214_169798918_169798959_169802620_169802726_169803168_169803310_169804111_169804241_169806003_169806089_169807790_169807930_169821678_169821760_169823407_169823473_169827050_169827200_169827710_169827841_169829262_169829450_169830258_169830342_169830695_169830748_169832416_169832507_169836926_169837113_169842416_169842540_169843673_169843770_169847689_169847804_169849499_169849605_169850264_169850346_169851816_169851937_169852789
transcript_119679.known	chr6	-	762	6	FSM	ENSG00000112514.18	ENST00000374496.3	762	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	867.550897642323	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGATACTTCAACGCCTT	-10	True	NA	-88	True	NA	NA	NA	33418070	33416618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417817_33417958
transcript_119687.known	chr6	-	822	5	FSM	ENSG00000112514.18	ENST00000440279.7	822	5	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_3	82.592372529187	9351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGCCTTTTGCCTGT	-11	True	NA	-21	True	AATAAA	-14	NA	33417921	33416551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480
transcript_119688.known	chr6	-	855	6	FSM	ENSG00000112514.18	ENST00000488034.6	855	6	0	0	0	0	multi-exon	TRUE	canonical	3	608	junction_5	627.165879173923	6704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTATTTCTCTTTA	0	True	NA	-1	True	NA	NA	NA	33418107	33416441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958
transcript_119689.known	chr6	-	658	6	FSM	ENSG00000112514.18	ENST00000374484.8	658	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	912.051007345532	3220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	26	True	NA	-19	True	AATAAA	-16	NA	33418142	33416549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417246_33417311_33417480_33417696_33418086
transcript_119690.known	chr6	-	961	4	FSM	ENSG00000112514.18	ENST00000465956.1	961	4	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_3	87.7585070267012	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGCCTTTTGCCTGTT	21	True	NA	-20	True	AATAAA	-15	NA	33417889	33416550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250
transcript_119691.known	chr6	-	562	4	FSM	ENSG00000112514.18	ENST00000479249.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	2196	junction_1	11.5566238822398	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTTTTTTGTCAT	-3	True	NA	-11	True	AATAAA	-24	NA	33417543	33416541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417311_33417480
transcript_119692.known	chr6	-	676	5	FSM	ENSG00000112514.18	ENST00000488478.5	676	5	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	927.018473386588	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	-3	True	NA	-19	True	AATAAA	-16	NA	33418086	33416549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33417096_33417143_33417250_33417311_33417480_33417696_33417958
transcript_119696.known	chr6	+	2715	2	FSM	ENSG00000213588.6	ENST00000395064.3	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTGGACTGGATTGA	-16	True	NA	27	True	AATAAA	-20	NA	33454575	33457544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33454776_33455029
transcript_119697.known	chr6	-	422	1	FSM	ENSG00000274259.2	ENST00000614205.1	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTGGATATATACA	-5	True	NA	NA	False	ATTAAA	-32	NA	33454408	33453986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33454000_33454400
transcript_1197.nnic	chr1	+	1333	9	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	32.6876792538106	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	-7	True	NA	22	True	AATAAA	-24	NA	6580006	6589280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_6580137_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_119701.known	chr6	+	897	6	FSM	ENSG00000204188.7	ENST00000618642.4	897	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.54919333848297	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGTGCTGGCCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	33583737	33589026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33584071_33584727_33584841_33585218_33585368_33585589_33585722_33586669_33586789_33588975
transcript_119705.known	chr6	-	2170	6	FSM	ENSG00000030110.14	ENST00000374467.4	2170	6	0	0	0	0	multi-exon	TRUE	canonical	3	406	junction_1	29.7011784277998	1747	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-16	True	NA	-5	True	AATAAA	-17	NA	33580276	33572551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33580024
transcript_119720.nnic	chr6	-	681	5	NNC	ENSG00000137288.10	novel	1284	4	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_3	913.665830596723	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACGGTTTGGGAATCTC	-31	True	NA	-23	True	AATAAA	-22	NA	33711744	33697567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_33697751_33700443_33700514_33701345_33701421_33710694_33710852_33711548
transcript_119738.known	chr6	+	9870	59	FSM	ENSG00000096433.11	ENST00000374316.9	9870	59	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_1	39.9383628853804	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGTGTTTCCTGCACTC	29	False	NA	27	True	AATAAA	-27	NA	33620364	33696574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33620437_33620614_33621692_33640483_33640555_33655765_33655888_33657931_33658019_33658669_33658829_33659020_33659120_33659465_33659550_33662527_33662675_33662910_33663007_33663499_33663551_33663737_33663881_33664869_33664970_33665052_33665214_33665834_33665977_33667128_33667291_33667791_33667965_33668514_33668635_33668973_33669157_33670324_33670577_33670670_33670816_33671164_33671307_33672028_33672229_33673590_33673721_33674207_33674266_33675690_33675857_33676767_33676933_33677014_33677090_33677503_33677630_33678420_33678544_33678638_33678840_33679881_33680134_33680328_33680455_33680554_33680681_33682523_33682645_33683206_33683398_33684019_33684169_33684356_33684466_33684597_33684689_33684773_33684944_33685358_33685534_33685642_33685828_33686052_33686254_33686408_33686520_33687008_33687105_33687225_33687328_33687477_33687565_33688056_33688168_33688238_33688432_33688655_33688782_33689237_33689411_33690033_33690199_33690916_33691110_33691614_33691720_33691800_33691929_33692727_33692894_33693544_33693706_33694923_33695086_33695711
transcript_119739.known	chr6	-	1284	4	FSM	ENSG00000137288.10	ENST00000607484.6	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_3	120.024997396376	5293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTATGCCGAAATGCAG	13	True	NA	-6	True	AATAAA	-23	NA	33711700	33696763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33697751_33700443_33700514_33701345_33701421_33711548
transcript_119740.known	chr6	-	432	3	FSM	ENSG00000137288.10	ENST00000374214.3	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	925	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACGGTTTGGGAATCTC	-14	True	NA	-23	True	AATAAA	-22	NA	33711727	33697567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33697751_33700443_33700514_33711548
transcript_119743.known	chr6	-	558	5	FSM	ENSG00000096395.11	ENST00000430124.7	558	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACTCTTATTTAATA	0	True	NA	NA	False	AATAAA	-15	NA	33804003	33794672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33794836_33795502_33795606_33799104_33799222_33801046_33801171_33803952
transcript_119745.known	chr6	+	311	2	FSM	ENSG00000214810.4	ENST00000399027.3	311	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAATAATTGGCCACTG	68	False	NA	NA	False	AAAAAG	-8	NA	34219438	34220066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34219706_34220022
transcript_119748.known	chr6	+	1887	6	FSM	ENSG00000137309.20	ENST00000401473.7	1887	6	0	0	0	0	multi-exon	FALSE	canonical	3	6337	junction_3	5738.95386285689	6914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	-4	True	NA	69	True	AATAAA	-20	NA	34236872	34246231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34236964_34237203_34237318_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_119749.known	chr6	+	1920	6	FSM	ENSG00000137309.20	ENST00000311487.9	1920	6	0	0	0	0	multi-exon	FALSE	canonical	3	17101	junction_3	1578.19322010963	7065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	-4	True	NA	69	True	AATAAA	-20	NA	34236872	34246231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34236964_34237203_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_119763.known	chr6	+	1773	5	FSM	ENSG00000137309.20	ENST00000347617.10	1773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_1	8325.67495762356	7991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	-4	True	NA	69	True	AATAAA	-20	NA	34236872	34246231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34236964_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_119764.nnic	chr6	-	769	6	NNC	ENSG00000272325.2	novel	9900	5	NA	NA	217	-8660	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	181.205518679758	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTGTCCTATAATGTGC	374	False	NA	44	True	ATTAAA	-30	NA	34392452	34288338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_34288486_34288739_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
transcript_119766.known	chr6	-	9900	5	FSM	ENSG00000272325.2	ENST00000607016.2	9900	5	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	21.3131414859471	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTTAGTGTCTGGTCT	-13	True	NA	-3	True	AATAAA	-20	NA	34392669	34279678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392263
transcript_119771.nic	chr6	-	419	2	ISM	ENSG00000272325.2	ENST00000607016.2	9900	5	217	62064	217	-62064	5prime_fragment	FALSE	canonical	3	438	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGTTATCCGGTCCCT	374	False	NA	NA	False	AATAAA	-25	NA	34392452	34341742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_34341973_34392263
transcript_119772.known	chr6	-	4782	9	FSM	ENSG00000270800.3	ENST00000639725.1	4782	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4378.21681738125	2597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGTCAAGTTCCTTTG	-4	True	NA	NA	False	NA	NA	NA	34426071	34284886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_119776.known	chr6	-	1053	5	FSM	ENSG00000186577.14	ENST00000481533.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	21.821720830402	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	122	False	NA	-26	True	AATAAA	-15	NA	34248989	34246394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248726
transcript_119777.known	chr6	-	818	5	FSM	ENSG00000186577.14	ENST00000476320.6	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	18.1796589626978	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	30	True	NA	-26	True	AATAAA	-15	NA	34249006	34246394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248978
transcript_119778.known	chr6	-	903	5	FSM	ENSG00000186577.14	ENST00000468145.1	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	29.2489316044193	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCAGGCTTTGGAGTT	122	False	NA	-116	True	NA	NA	NA	34248989	34246484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248726
transcript_119779.known	chr6	-	792	5	FSM	ENSG00000186577.14	ENST00000394990.8	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	27.6981497577004	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-4	True	NA	-26	True	AATAAA	-15	NA	34249040	34246394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248978
transcript_119784.known	chr6	-	1093	4	FSM	ENSG00000186577.14	ENST00000637920.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	35.5621521658443	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-19	True	NA	-26	True	AATAAA	-15	NA	34249055	34246394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248726
transcript_119785.known	chr6	-	806	4	FSM	ENSG00000186577.14	ENST00000413013.6	806	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	34.8807492274273	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	16	True	NA	-26	True	AATAAA	-15	NA	34249020	34246394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248978
transcript_119786.known	chr6	-	363	1	FSM	ENSG00000220583.1	ENST00000402419.1	363	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	663	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGAGCGCATTGTCC	50	False	NA	NA	False	NA	NA	NA	34263673	34263310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34263300_34263700
transcript_11979.nic	chr1	+	1137	6	NIC	ENSG00000000460.17	novel	925	6	NA	NA	34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	89.3545745891054	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATTTGTAAAATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	169794763	169804386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804074
transcript_11980.known	chr1	+	782	6	FSM	ENSG00000000460.17	ENST00000496973.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	103.946909525969	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATTTAAATCTTACCAAA	-18	True	NA	NA	False	ATTAAA	-2	NA	169795042	169804347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804111
transcript_119801.known	chr6	-	777	6	FSM	ENSG00000124614.16	ENST00000467531.5	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_5	3710.13182515123	34444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	304	False	NA	-10	True	AATAAA	-22	NA	34425784	34417453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425557
transcript_119807.known	chr6	-	588	6	FSM	ENSG00000124614.16	ENST00000648437.1	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	6754	junction_5	1435.86302967936	198254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-2	True	NA	-10	True	AATAAA	-22	NA	34426069	34417453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_119808.known	chr6	-	781	6	FSM	ENSG00000124614.16	ENST00000621356.3	781	6	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_5	3115.25245204943	51364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	7	True	NA	-10	True	AATAAA	-22	NA	34426026	34417453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
transcript_119809.known	chr6	-	671	7	FSM	ENSG00000124614.16	ENST00000344700.8	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4332.82348282657	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	36	False	NA	-10	True	AATAAA	-22	NA	34426052	34417453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_119810.known	chr6	-	638	6	FSM	ENSG00000124614.16	ENST00000644393.1	638	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3769.6756677465	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAACCTTAATCTTTTG	-2	True	NA	-23	True	AATAAA	-9	NA	34426069	34417466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417611_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_119811.known	chr6	-	615	6	FSM	ENSG00000124614.16	ENST00000464218.5	615	6	0	0	0	0	multi-exon	FALSE	canonical	1	55	junction_5	3745.21729142649	34436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	508	False	NA	-10	True	AATAAA	-22	NA	34425580	34417453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425515
transcript_119812.known	chr6	-	1407	5	FSM	ENSG00000124614.16	ENST00000644700.1	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	6754	junction_4	1438.83129657372	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	0	True	NA	-10	True	AATAAA	-22	NA	34426067	34417453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_119814.known	chr6	+	668	3	FSM	ENSG00000124507.11	ENST00000487760.1	668	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTTTTTATCTTGAAA	24	False	NA	NA	False	ATTAAA	-8	NA	34514889	34527694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34515069_34526242_34526369_34527331
transcript_119818.known	chr6	-	4338	5	FSM	ENSG00000196821.10	ENST00000374023.8	4338	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	14.6714007511212	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-5	True	NA	-15	True	ATTAAA	-22	NA	34696767	34587287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34590601_34606554_34606905_34646600_34646799_34654624_34654780_34696445
transcript_11982.nic	chr1	+	1627	5	ISM	ENSG00000000460.17	ENST00000496973.5	782	6	-4	-39	-1	0	intron_retention	FALSE	canonical	0	0	junction_1	99.2355153158384	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATTTGTAAAATTTA	-22	True	NA	NA	False	AATAAA	-16	NA	169795038	169804386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168
transcript_119823.known	chr6	-	4232	4	FSM	ENSG00000196821.10	ENST00000374026.7	4232	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	29.0095769627128	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-9	True	NA	-15	True	ATTAAA	-22	NA	34696859	34587287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34590601_34606554_34606905_34654624_34654780_34696445
transcript_119825.known	chr6	+	718	2	FSM	ENSG00000272288.7	ENST00000606971.5	718	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	34696316	34697470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34696723_34697158
transcript_119826.known	chr6	+	365	2	FSM	ENSG00000272288.7	ENST00000606496.2	371	2	5	1	5	0	multi-exon	FALSE	canonical	3	26	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	-13	True	NA	9	True	AATAAA	-15	NA	34696944	34697470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34696998_34697158
transcript_119828.nnic	chr6	-	685	4	Antisense	novelGene_ENSG00000217130.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCTCAGTGGATT	NA	False	NA	-2	True	AATAAA	-19	NA	34757396	34726093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_34726337_34755667_34755693_34756108_34756228_34757098
transcript_119831.nnic	chr6	-	696	4	Antisense	novelGene_ENSG00000217130.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCTCAGTGGATT	NA	False	NA	-2	True	AATAAA	-19	NA	34757396	34726093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_34726348_34755667_34755693_34756108_34756228_34757098
transcript_119833.nnic	chr6	-	660	3	Antisense	novelGene_ENSG00000217130.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCTCAGTGGATT	NA	False	NA	-2	True	AATAAA	-19	NA	34757396	34726093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_34726337_34756108_34756228_34757098
transcript_119835.known	chr6	+	498	1	FSM	ENSG00000217130.1	ENST00000408001.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	334	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	35	False	NA	NA	False	NA	NA	NA	34744175	34744673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34744200_34744700
transcript_119842.known	chr6	+	600	5	FSM	ENSG00000124562.10	ENST00000374018.5	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1272.95529674062	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTGGGACAAAAAAGA	19	True	NA	-53	True	NA	NA	NA	34757524	34773714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34757552_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_119845.known	chr6	+	806	6	FSM	ENSG00000124562.10	ENST00000244520.10	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_1	394.54865352704	16523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTTCTCTAGCTCAT	-1	True	NA	8	True	TATAAA	-18	NA	34757504	34773857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34757552_34757911_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_119846.known	chr6	+	1054	5	FSM	ENSG00000124562.10	ENST00000374017.3	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	2892	junction_2	158.207735272331	4161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTCCCTTTTTCCTCC	24	False	NA	27	True	AATAAA	-24	NA	34757553	34773794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_119847.known	chr6	+	9567	21	FSM	ENSG00000065060.18	ENST00000192788.6	9567	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	8.73842090998139	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTTGTATATCCGTTG	-10	True	NA	7	True	ATTAAA	-16	NA	34792082	34877514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34792295_34821652_34821816_34821916_34821956_34823256_34823349_34834216_34834407_34834720_34834862_34835293_34835465_34836155_34836349_34855616_34855704_34856238_34856410_34856789_34856930_34857328_34857471_34857723_34857918_34858123_34859572_34864001_34864199_34867224_34867380_34867465_34867617_34870853_34871117_34871583_34871693_34871818_34871926_34872312
transcript_119848.known	chr6	-	1945	6	FSM	ENSG00000064995.19	ENST00000650109.1	1945	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	186.205907532495	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-1	True	NA	NA	False	AATACA	-39	NA	34888027	34877461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34878721_34879625_34879737_34879966_34880064_34880288_34880377_34882931_34883081_34887786
transcript_11985.known	chr1	-	2358	9	FSM	ENSG00000188404.10	ENST00000236147.6	2358	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.433012701892219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTGCCTAGTTTGTTA	-3	True	NA	0	True	AATAAA	-21	NA	169711620	169690666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169691803_169696534_169696554_169701559_169701689_169703254_169703441_169704567_169704754_169707341_169707450_169708416_169708804_169710435_169710518_169711495
transcript_119853.known	chr6	-	1849	5	FSM	ENSG00000064995.19	ENST00000361288.9	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	19.4679223339318	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAGTTTGACTAGATA	-16	True	NA	NA	False	AATACA	-39	NA	34888042	34877461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34878721_34879966_34880064_34880288_34880377_34882931_34883081_34887786
transcript_119854.known	chr6	-	1465	4	FSM	ENSG00000064995.19	ENST00000420584.3	1465	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	167.348604880816	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGTGTATTCATTTTCT	NA	False	NA	-4	True	ATTAAA	-17	NA	34888071	34877777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34878721_34880288_34880377_34882931_34883081_34887786
transcript_119859.nic	chr6	-	402	2	FSM	ENSG00000064995.19	ENST00000693481.1	562	2	-44	204	-3	-204	multi-exon	FALSE	canonical	3	396	junction_1	0	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAAAGCAGAAAGTAGA	NA	False	NA	NA	False	AATAGA	-17	NA	34888083	34882975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34883081_34887786
transcript_119860.known	chr6	-	179	1	FSM	ENSG00000273870.1	ENST00000616756.1	179	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAAATAAATCTTTGG	NA	False	NA	NA	False	NA	NA	NA	35071049	35070870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35070900_35071000
transcript_119861.nic	chr6	+	2781	14	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	50.9865976124577	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	4	True	NA	5	True	AATAAA	-14	NA	35259490	35295983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
transcript_119863.known	chr6	+	2653	14	FSM	ENSG00000065029.15	ENST00000373953.8	2653	14	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	28.5483084815854	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCCTCCATCCTTT	-2	True	NA	7	True	AATAAA	-16	NA	35259734	35295985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
transcript_119864.nic	chr6	+	2616	13	NIC	ENSG00000065029.15	novel	1373	10	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	55.3947325012847	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	4	True	NA	5	True	AATAAA	-14	NA	35259490	35295983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_35259728_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_119865.known	chr6	+	2447	13	FSM	ENSG00000065029.15	ENST00000339411.5	2447	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	33.3137442440137	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	37	False	NA	5	True	AATAAA	-14	NA	35259773	35295983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_119869.known	chr6	+	697	4	FSM	ENSG00000065029.15	ENST00000460229.1	697	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.9156444164835	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGCAGAGGATGATGAG	34	False	NA	NA	False	NA	NA	NA	35259603	35287777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35259728_35281055_35281225_35286127_35286400_35287645
transcript_119871.known	chr6	+	1476	5	FSM	ENSG00000065029.15	ENST00000491400.5	1476	5	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_1	74.8214541425118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGTGCAACAGAACAG	7358	False	NA	NA	False	NA	NA	NA	35258908	35288315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35259387_35281055_35281225_35286127_35286209_35286321_35286400_35287645
transcript_119873.nnic	chr6	+	1458	5	NNC	ENSG00000023892.11	novel	2296	11	NA	NA	976	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.7278356643601	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	104	False	NA	NA	False	AATAAA	-19	NA	35318583	35321771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_35319000_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_119874.known	chr6	+	2296	11	FSM	ENSG00000023892.11	ENST00000316637.7	2296	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	7.57627876995032	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	-19	True	NA	NA	False	AATAAA	-19	NA	35297817	35321771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35297953_35309669_35309811_35310458_35310645_35312301_35312539_35312625_35312773_35317890_35318000_35318172_35318472_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_119875.known	chr6	+	3734	8	FSM	ENSG00000112033.14	ENST00000360694.8	3734	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	11.1702958870426	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACTGGAAGCTGACT	-1	True	NA	15	True	AATAAA	-19	NA	35342557	35428178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35342682_35347066_35347151_35410986_35411218_35420126_35420282_35421819_35421959_35423945_35424149_35424328_35424780_35425831
transcript_11988.known	chr1	-	1462	2	FSM	ENSG00000171806.12	ENST00000310392.5	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	3	True	NA	-4	True	AATAAA	-16	NA	169794907	169792528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169793898_169794814
transcript_119883.nnic	chr6	+	1020	5	NNC	ENSG00000112033.14	novel	3453	6	NA	NA	-20	-68537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	47.1062628532555	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTCTTACATTAGAAG	-21	True	NA	8	True	AATAAA	-17	NA	35342537	35356856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_35342682_35347066_35347151_35348362_35348443_35348919_35349004_35356228
transcript_11989.known	chr1	-	850	2	FSM	ENSG00000171806.12	ENST00000454472.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTGGGAAAAAAGTCT	NA	False	NA	NA	False	NA	NA	NA	169794963	169793141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169793898_169794869
transcript_119891.nnic	chr6	+	856	3	NNC	ENSG00000112033.14	novel	3453	6	NA	NA	-20	-68537	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	53.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTCTTACATTAGAAG	-21	True	NA	8	True	AATAAA	-17	NA	35342537	35356856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_35342682_35347066_35347151_35356228
transcript_119910.known	chr6	+	718	6	FSM	ENSG00000198755.11	ENST00000322203.7	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1751.87122814435	169528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	-3	True	NA	21	True	AATAAA	-15	NA	35468400	35470780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_119911.known	chr6	+	1063	5	FSM	ENSG00000198755.11	ENST00000464112.5	1063	5	0	0	0	0	multi-exon	FALSE	canonical	3	13064	junction_3	328.868894850212	24942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	16	False	NA	26	True	AATAAA	-20	NA	35468419	35470785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_119912.known	chr6	+	1069	5	FSM	ENSG00000198755.11	ENST00000467020.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1815.92281980815	5645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	4	True	NA	26	True	AATAAA	-20	NA	35468407	35470785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469530_35470178_35470352_35470579
transcript_119913.known	chr6	+	962	6	FSM	ENSG00000198755.11	ENST00000478340.2	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_3	4868.42590577283	4787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	16	False	NA	26	True	AATAAA	-20	NA	35468419	35470785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469286_35469380_35469530_35470178_35470352_35470579
transcript_119914.known	chr6	+	632	5	FSM	ENSG00000198755.11	ENST00000490335.4	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	9217	junction_1	1886.69106837871	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTGGCTGTCAAC	16	False	NA	-38	True	NA	NA	NA	35468419	35470640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468440_35468798_35469028_35469380_35469530_35470178_35470352_35470579
transcript_119916.known	chr6	-	2986	13	FSM	ENSG00000007866.22	ENST00000338863.13	2986	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_12	23.6835327225949	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-1	True	NA	0	True	ATTAAA	-29	NA	35497079	35473596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460_35486712_35496897
transcript_119918.nic	chr6	-	2846	12	ISM	ENSG00000007866.22	ENST00000338863.13	2986	13	10326	0	10197	0	3prime_fragment	FALSE	canonical	3	108	junction_11	16.9924630837584	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	NA	False	NA	0	True	ATTAAA	-29	NA	35486753	35473596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460
transcript_119937.known	chr6	+	1454	3	FSM	ENSG00000228559.2	ENST00000658088.1	1454	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTATAGAAGTGATTGT	7	False	NA	NA	False	AATAAA	-13	NA	35543729	35546573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35543759_35544867_35544934_35545214
transcript_119938.known	chr6	+	392	1	FSM	ENSG00000219023.1	ENST00000403958.1	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	595	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	29	False	NA	NA	False	AAAACA	-35	NA	35555872	35556264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35555900_35556300
transcript_119939.known	chr6	-	3750	11	FSM	ENSG00000096060.15	ENST00000357266.9	3750	11	0	0	0	0	multi-exon	FALSE	canonical	1	147	junction_7	137.013466491437	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCATTGTTTTTGGTTT	1	True	NA	-6	True	AATAAA	-17	NA	35688915	35573589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35575943_35576993_35577234_35580035_35580222_35587033_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
transcript_11994.known	chr1	-	6308	13	FSM	ENSG00000000457.14	ENST00000367771.11	6308	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	8.18874566435883	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGATAAATCAGTTTTAT	25	True	NA	NA	False	ATTAAA	-16	NA	169893896	169849630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_11995.nic	chr1	-	2982	13	NIC	ENSG00000000457.14	novel	3090	14	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	11.8001294719827	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTATATCTGTTAGA	-3	True	NA	0	True	AATAAA	-32	NA	169893924	169853073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869129_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_119951.known	chr6	+	488	4	FSM	ENSG00000196748.10	ENST00000360454.6	488	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	18	False	NA	3	True	ATTAAA	-14	NA	35776614	35779552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35776703_35777458_35777582_35777850_35777930_35779354
transcript_119952.nic	chr6	+	491	4	NIC	ENSG00000196748.10	novel	532	3	NA	NA	29	5	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTCTGTACTTTCTGG	122	False	NA	8	True	ATTAAA	-19	NA	35776718	35779557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_35776805_35777458_35777582_35777850_35777930_35779354
transcript_119954.known	chr6	+	426	3	FSM	ENSG00000196748.10	ENST00000403376.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	1	True	NA	3	True	ATTAAA	-14	NA	35776597	35779552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35776703_35777458_35777582_35779354
transcript_119955.known	chr6	+	532	3	FSM	ENSG00000196748.10	ENST00000481904.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	-3	True	NA	3	True	ATTAAA	-14	NA	35776593	35779552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35776805_35777458_35777582_35779354
transcript_119956.known	chr6	+	313	2	FSM	ENSG00000196748.10	ENST00000467122.1	313	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	93	False	NA	3	True	ATTAAA	-14	NA	35776689	35779552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35776805_35779354
transcript_119958.known	chr6	-	4348	16	FSM	ENSG00000096063.16	ENST00000373825.7	4348	16	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_4	64.1330561324571	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTATGCTTTTTT	-3	True	NA	54	True	AGTAAA	-13	NA	35921098	35832965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_119959.known	chr6	-	4357	16	FSM	ENSG00000096063.16	ENST00000423325.6	4357	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	180.276035259512	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-1	True	NA	-14	True	AATAAA	-20	NA	35921147	35833033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891042_35920467_35920529_35921043
transcript_119966.nic	chr6	-	942	10	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-90	37496	-41	-795	5prime_fragment	FALSE	canonical	3	649	junction_5	54.4122353705919	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAGAAGAAGCAGAAGCG	NA	False	NA	-61	True	AAGAAA	-1	NA	35921188	35870461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_119972.nic	chr6	-	883	8	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-90	39597	-41	1677	5prime_fragment	FALSE	canonical	3	649	junction_3	56.0429864169515	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATTTTCTTTTAGGGAC	NA	False	NA	NA	False	NA	NA	NA	35921188	35872562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_119974.nic	chr6	-	738	6	ISM	ENSG00000096063.16	ENST00000373825.7	4348	16	-90	53630	-41	130	5prime_fragment	FALSE	canonical	3	649	junction_1	63.3232974504645	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTCTGAACACACATCTG	NA	False	NA	-20	True	AATAAA	-19	NA	35921188	35886595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_119979.known	chr6	-	634	5	FSM	ENSG00000096063.16	ENST00000513367.1	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_3	58.0102361656975	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTCTTCTTACACGCA	-6	True	NA	NA	False	NA	NA	NA	35921101	35887824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_119982.known	chr6	+	1376	13	FSM	ENSG00000112062.11	ENST00000468133.5	1376	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	70.28291044059	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTGTGGATGCTCCAG	0	True	NA	NA	False	NA	NA	NA	36027781	36108670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36027885_36028190_36028274_36052698_36052829_36059288_36059348_36072872_36072985_36073690_36073721_36074048_36074097_36075847_36075963_36076536_36076609_36095986_36096067_36102570_36102650_36107454_36107629_36108379
transcript_119984.known	chr6	+	6316	12	FSM	ENSG00000156711.17	ENST00000211287.9	6316	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	9.74467432426299	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGCACAGACCCCTG	-8	True	NA	11	True	AATAAA	-18	NA	36130512	36144521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
transcript_119987.known	chr6	+	6196	10	FSM	ENSG00000156711.17	ENST00000373766.9	6196	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	28.4487843911358	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCACAGACCCCTGAAT	245	False	NA	14	True	AATAAA	-21	NA	36130483	36144524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36138701_36138781_36138878_36139056_36139293
transcript_119988.known	chr6	+	5384	8	FSM	ENSG00000112078.14	ENST00000373731.7	5384	8	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_3	27.6095221669212	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTTTTTTTTTTAG	-34	True	NA	12	True	AATAAA	-14	NA	36442999	36491141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_11999.nic	chr1	-	444	2	ISM	ENSG00000000457.14	ENST00000470238.1	1538	11	-40	29533	-33	-29533	5prime_fragment	FALSE	canonical	3	33	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTAGTACTTTTTACTAT	NA	False	NA	NA	False	AATAAA	-34	NA	169893992	169888651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_169888891_169893787
transcript_119990.known	chr6	-	1605	8	FSM	ENSG00000010030.14	ENST00000340181.9	1605	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	1.35526185435788	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTTTATTTTT	2	True	NA	NA	False	AATAAA	-16	NA	36387669	36366193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36375870_36376036_36385533_36385670_36387535
transcript_119991.known	chr6	+	1339	7	FSM	ENSG00000112078.14	ENST00000265344.8	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	66.7183133280011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTGGGTCTGGTGCT	2	True	NA	NA	False	NA	NA	NA	36443035	36487406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36443112_36470051_36470258_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_119992.known	chr6	-	1599	7	FSM	ENSG00000010030.14	ENST00000620358.4	1599	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.13437474581095	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-32	True	NA	NA	False	AATAAA	-15	NA	36387800	36366194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36375870_36376036_36387535
transcript_119993.known	chr6	-	1570	7	FSM	ENSG00000010030.14	ENST00000373738.4	1570	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.03442593595562	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-32	True	NA	NA	False	AATAAA	-15	NA	36387800	36366194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36385533_36385670_36387535
transcript_119994.nic	chr6	+	1268	6	ISM	ENSG00000112078.14	ENST00000373731.7	5384	8	11	9117	-1	-5382	5prime_fragment	FALSE	canonical	3	131	junction_3	32.1347164294319	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTAAATCCTTTTGA	-23	True	NA	27	True	ATTAAA	-24	NA	36443010	36482024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561
transcript_119997.known	chr6	-	1434	6	FSM	ENSG00000010030.14	ENST00000538992.3	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.894427190999916	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-32	True	NA	NA	False	AATAAA	-15	NA	36387800	36366194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36387535
transcript_12.known	ERCC-00034	+	1003	1	FSM	ERCC-00034A	DQ855001	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00034_+_0_1000
transcript_1200.nic	chr1	+	1216	2	ISM	ENSG00000204859.13	ENST00000435905.5	1001	3	-23	566	0	-566	5prime_fragment	FALSE	canonical	3	33	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGACCTTAAGACAAT	-20	True	NA	NA	False	NA	NA	NA	6579993	6581679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_6580071_6580540
transcript_12000.known	chr1	-	2954	20	FSM	ENSG00000075945.13	ENST00000361580.7	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	9.10298115608166	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAAGTCATGTGTTT	-45	True	NA	NA	False	ATTAAA	-21	NA	170074695	169921328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170055304_170055437_170074435
transcript_120001.known	chr6	+	319	2	FSM	ENSG00000224666.3	ENST00000411643.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGGGTTGCTTTATG	210	False	NA	NA	False	NA	NA	NA	36386830	36391994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36386931_36391775
transcript_120002.nnic	chr6	-	2315	14	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	45.6987822400647	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-40	True	NA	-11	True	AATAAA	-14	NA	36547486	36493891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_36494638_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_120003.known	chr6	-	3585	14	FSM	ENSG00000112079.9	ENST00000229812.8	3585	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_13	30.9941777315424	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-33	True	NA	-11	True	AATAAA	-14	NA	36547479	36493891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_120006.nnic	chr6	-	1063	8	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	-7	-21215	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	66.6008518668324	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCAAAATTGATGTAGAGG	-40	True	NA	NA	False	AATAAA	-17	NA	36547486	36515106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_36515199_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_120007.nic	chr6	-	1210	7	ISM	ENSG00000112079.9	ENST00000229812.8	3585	14	-7	21207	-7	-21207	5prime_fragment	FALSE	canonical	3	73	junction_6	40.6653005235012	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGAGGGCAATTTT	-40	True	NA	NA	False	AATAAA	-25	NA	36547486	36515098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_12001.known	chr1	-	2718	19	FSM	ENSG00000075945.13	ENST00000367767.5	2718	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_18	14.4952099367726	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGTCATGTGTTTATA	62	True	NA	NA	False	ATTAAA	-24	NA	170074588	169921325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170074435
transcript_12002.known	chr1	-	3159	21	FSM	ENSG00000075945.13	ENST00000538366.5	3159	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	17.3608755539575	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGAAAGTCATGTGT	43	False	NA	NA	False	ATTAAA	-19	NA	170074738	169921330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170041676_170041841_170046711_170046867_170055304_170055437_170074435
transcript_120024.known	chr6	+	4228	6	FSM	ENSG00000112081.17	ENST00000373715.11	4228	6	0	0	0	0	multi-exon	FALSE	canonical	3	3600	junction_3	220.315228706506	25520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTATCCTGCTTTCTCT	-5	True	NA	NA	False	AATACA	-16	NA	36594361	36605600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36601151_36601191_36601707_36601795_36601961
transcript_120025.known	chr6	+	1095	7	FSM	ENSG00000112081.17	ENST00000477442.6	1095	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1856.61149678655	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATGTACAGAAAATTCAA	24	False	NA	NA	False	NA	NA	NA	36594390	36602040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36599820_36600277_36601151_36601191_36601707_36601795_36601961
transcript_120026.known	chr6	+	2104	4	FSM	ENSG00000124762.14	ENST00000448526.6	2104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.0457905740837	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	26	False	NA	23	True	AATAAA	-24	NA	36676489	36687337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36676525_36677901_36677934_36684096_36684547_36685750
transcript_120027.known	chr6	+	793	4	FSM	ENSG00000124762.14	ENST00000373711.3	793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.2771042098557	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACATACCCTGGCCGC	10	True	NA	NA	False	TTTAAA	-9	NA	36678720	36685924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36678799_36682639_36682731_36684096_36684547_36685750
transcript_120028.known	chr6	+	2267	3	FSM	ENSG00000124762.14	ENST00000405375.5	2267	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	58	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	-1	True	NA	23	True	AATAAA	-24	NA	36678709	36687337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36678940_36684096_36684547_36685750
transcript_120029.known	chr6	+	2117	3	FSM	ENSG00000124762.14	ENST00000244741.10	2117	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	3	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAATATTACTATTGTG	3	True	NA	18	True	AATAAA	-19	NA	36678713	36687332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36678799_36684096_36684547_36685750
transcript_120032.nnic	chr6	-	839	7	NNC	ENSG00000124772.12	novel	3342	21	NA	NA	-86	-18529	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	0.942809041582063	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGAGGCTTTTGATTATT	4967	False	NA	NA	False	AATAAA	-15	NA	36839530	36797384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_36797667_36798164_36798242_36798454_36798495_36799966_36800071_36822113_36822161_36823057_36823099_36839282
transcript_120035.known	chr6	+	6763	9	FSM	ENSG00000198663.17	ENST00000480824.7	6763	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	14.683643110618	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	-15	True	NA	22	True	ATTAAA	-19	NA	36885951	36928964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36886029_36894503_36894604_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_120038.known	chr6	+	1309	8	FSM	ENSG00000198663.17	ENST00000355190.7	1309	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	6.90755280213519	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTCTGGGGGTTGGTT	18	False	NA	8	True	AATAAA	-17	NA	36885863	36923522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36886029_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_120045.known	chr6	-	1516	4	FSM	ENSG00000137168.8	ENST00000373699.6	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	34.6153466286591	4145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTCTGATTC	-3	True	NA	-21	True	AATAAA	-20	NA	36874803	36854828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36856034_36856585_36856655_36871717_36871873_36874716
transcript_120049.known	chr6	-	1955	12	FSM	ENSG00000137409.20	ENST00000373627.10	1955	12	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_4	657.552901432134	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	278	False	NA	-9	True	AATAAA	-18	NA	36986196	36968140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_120050.nnic	chr6	-	1584	12	NNC	ENSG00000137409.20	novel	2006	12	NA	NA	467	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	1016.79309515118	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	816	False	NA	-9	True	AATAAA	-18	NA	36985658	36968140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985634
transcript_120052.known	chr6	-	2006	12	FSM	ENSG00000137409.20	ENST00000373616.9	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	449.759292830736	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	176	False	NA	-9	True	AATAAA	-18	NA	36986298	36968140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_120055.known	chr6	+	493	1	FSM	ENSG00000216412.4	ENST00000424565.2	493	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	NA	False	NA	NA	False	NA	NA	NA	37091313	37091806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37091300_37091800
transcript_120057.known	chr6	+	3462	13	FSM	ENSG00000065491.8	ENST00000373491.3	3462	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	13.7042167071145	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	-2	True	NA	27	True	AATAAA	-20	NA	37257771	37332970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_120059.nnic	chr6	+	611	2	NNC	ENSG00000065491.8	novel	3462	13	NA	NA	-4	-68937	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTATTTTTTTTTTT	-6	True	NA	12	True	ATTAAA	-27	NA	37257767	37264033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_37257974_37263628
transcript_120060.known	chr6	-	1955	2	FSM	ENSG00000172738.12	ENST00000357219.4	1955	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCAATTTATGTCTCGA	9	True	NA	NA	False	AATAAA	-16	NA	37258122	37217641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_37219042_37257567
transcript_120064.known	chr6	+	2124	8	FSM	ENSG00000112130.17	ENST00000229866.10	2124	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	114.291428428579	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTACCTCTTCTTTG	7	True	NA	-51	True	NA	NA	NA	37354014	37391168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37354276_37360445_37360575_37368377_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_120066.known	chr6	+	5616	8	FSM	ENSG00000112130.17	ENST00000373479.9	5616	8	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_2	22.1405528754964	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATCAAATGCCCATTTTC	-25	True	NA	NA	False	AATAAA	-16	NA	37353982	37394734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_120075.known	chr6	+	1800	7	FSM	ENSG00000112130.17	ENST00000469731.5	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	122.709231745438	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	26	False	NA	12	True	AATAAA	-13	NA	37354090	37391231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37390741
transcript_120092.known	chr6	+	977	4	FSM	ENSG00000112130.17	ENST00000494320.5	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	138.679486586878	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAGTAAGACCACAGGG	-29	True	NA	NA	False	NA	NA	NA	37353978	37368874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37354276_37359182_37359343_37360445_37360575_37368483
transcript_120095.nic	chr6	+	666	3	ISM	ENSG00000112130.17	ENST00000479516.1	1525	4	-133	1564	-40	145	5prime_fragment	FALSE	canonical	3	322	junction_2	16.5	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGAATTGAGAACTAAAA	NA	False	NA	28	True	AATATA	-43	NA	37353938	37368683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_37354276_37360445_37360575_37368483
transcript_120097.known	chr6	+	299	1	FSM	ENSG00000239953.3	ENST00000481561.3	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCAAAAAGAAAAGAAGATA	7120	False	NA	NA	False	NA	NA	NA	37361184	37361483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37361200_37361500
transcript_120098.known	chr6	+	4034	24	FSM	ENSG00000137200.13	ENST00000373451.9	4034	24	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_15	20.3412289565586	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGGCTCTGTGTT	4	True	NA	13	True	ATTAAA	-18	NA	37433220	37481508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37480012
transcript_1201.nic	chr1	+	1280	2	ISM	ENSG00000204859.13	ENST00000377674.9	2347	11	2	7601	2	-566	5prime_fragment	FALSE	canonical	3	27	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGACCTTAAGACAAT	-18	True	NA	NA	False	NA	NA	NA	6579995	6581679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_6580137_6580540
transcript_120108.known	chr6	-	572	4	FSM	ENSG00000198937.9	ENST00000373408.4	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_3	54.7783412186483	2813	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTCTGCTGAGTAAATG	-3	True	NA	NA	False	AATAAA	-15	NA	37499893	37482937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_37483290_37484809_37484863_37485099_37485195_37499821
transcript_120110.known	chr6	+	3138	6	FSM	ENSG00000156639.12	ENST00000287218.9	3138	6	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_2	20.165316759228	1681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCTTGTTTCAC	-20	True	NA	15	True	ATTAAA	-15	NA	37819726	38154624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37820017_37929958_37930000_38061592_38061776_38082391_38082458_38116571_38116740_38152234
transcript_120115.known	chr6	-	2016	6	FSM	ENSG00000124767.7	ENST00000373365.5	2016	6	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_3	101.833982540211	10767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCATCATGTTCTT	-8	True	NA	0	True	AATAAA	-37	NA	38703145	38675924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_38677384_38682011_38682102_38682807_38682876_38684373_38684515_38686891_38686975_38702970
transcript_120123.known	chr6	-	835	2	FSM	ENSG00000112167.10	ENST00000481599.1	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTCTTTTCCGGATGT	23	True	NA	NA	False	NA	NA	NA	39115071	39113074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39113721_39114882
transcript_120124.known	chr6	-	2018	2	FSM	ENSG00000112167.10	ENST00000229903.5	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGTTGACTGATTTA	-14	True	NA	-1	True	ATTAAA	-28	NA	39115186	39104062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39105777_39114882
transcript_120127.known	chr6	-	3783	5	FSM	ENSG00000164626.9	ENST00000359534.4	3783	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	24.8130510014387	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-2	True	NA	-1	True	AATAAA	-20	NA	39229475	39188970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
transcript_120133.known	chr6	+	2186	3	FSM	ENSG00000146122.17	ENST00000475489.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	18	True	NA	NA	False	NA	NA	NA	39792395	39862819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_39792466_39856246_39856471_39860927
transcript_120134.known	chr6	-	3358	11	FSM	ENSG00000124615.20	ENST00000373188.6	3358	11	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_1	17.1583798768998	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAATTTGTGATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	39934551	39905058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_120138.known	chr6	-	2852	9	FSM	ENSG00000124615.20	ENST00000373195.7	2852	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	47.6392695158102	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-13	True	NA	-21	True	AATAAA	-19	NA	39934497	39905320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_120140.known	chr6	-	420	1	FSM	ENSG00000180211.5	ENST00000325612.5	420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	454	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTCCAGTATATTTGT	18	False	NA	-41	True	NA	NA	NA	39958833	39958413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39958400_39958800
transcript_120144.nnic	chr6	-	784	4	NNC	ENSG00000204092.2	novel	554	2	NA	NA	-1870	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGGTGTTTCTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	40348021	40344343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_40344757_40346010_40346153_40346586_40346672_40347877
transcript_120146.nnic	chr6	+	942	3	NNC	ENSG00000204091.8	novel	856	2	NA	NA	-49095	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	NA	False	NA	6	True	AATAAA	-17	NA	40285679	40379887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_40285873_40337116_40337260_40379281
transcript_120147.nnic	chr6	+	1071	3	NNC	ENSG00000204091.8	novel	856	2	NA	NA	-5865	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	NA	False	NA	6	True	AATAAA	-17	NA	40328909	40379887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_40329232_40337116_40337260_40379281
transcript_12015.known	chr1	+	2467	7	FSM	ENSG00000120370.14	ENST00000498166.6	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	32.9380732081685	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGAATATCACATTAT	-12	True	NA	21	True	AATAAA	-21	NA	170532150	170553446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_170532285_170533463_170533652_170536309_170536422_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_120150.known	chr6	+	1098	3	FSM	ENSG00000204091.8	ENST00000451810.3	1098	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	NA	False	NA	6	True	AATAAA	-17	NA	40334774	40379887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_40335124_40337116_40337260_40379281
transcript_120152.nnic	chr6	-	788	3	NNC	ENSG00000204092.2	novel	554	2	NA	NA	-3125	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGGTGTTTCTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	40349276	40344343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_40344757_40346010_40346153_40349043
transcript_120153.known	chr6	+	1165	2	FSM	ENSG00000204091.8	ENST00000373170.2	1165	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTGGGCTGATT	-4	True	NA	4	True	AATAAA	-15	NA	40378336	40379885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_40378898_40379281
transcript_120154.known	chr6	-	554	2	FSM	ENSG00000204092.2	ENST00000373171.2	554	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGGTGTTTCTACTT	NA	False	NA	0	True	ATTAAA	-16	NA	40346151	40344343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_40344757_40346010
transcript_120155.nnic	chr6	-	431	3	NNC	ENSG00000226454.3	novel	421	3	NA	NA	-686	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTGTTTATTTGGCA	NA	False	NA	NA	False	TATAAA	-26	NA	40524649	40516335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_40516445_40517303_40517514_40524537
transcript_120158.known	chr6	+	6209	10	FSM	ENSG00000001167.15	ENST00000341376.11	6209	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	40.5821830394437	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATCTCAAGTGTGTATTC	12	True	NA	21	True	AATAAA	-21	NA	41072973	41102403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41073085_41079028_41079165_41080810_41080898_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_120160.known	chr6	+	1660	9	FSM	ENSG00000001167.15	ENST00000353205.5	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	17.0545998194036	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCTGTGGTAATAATAAG	21	True	NA	10	True	AATAAA	-20	NA	41072982	41097950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_120170.known	chr6	-	3184	6	FSM	ENSG00000124596.17	ENST00000424266.7	3184	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.022478661666	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGTGGCTACCTTA	-7	True	NA	-19	True	AATAAA	-26	NA	41072356	41064771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072235
transcript_120171.known	chr6	-	1515	6	FSM	ENSG00000124596.17	ENST00000463088.5	1515	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.182879439152	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTATGAGTCTTC	-2	True	NA	-7	True	AATAAA	-13	NA	41072489	41066474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072334
transcript_120175.nic	chr6	+	931	5	ISM	ENSG00000001167.15	ENST00000353205.5	1660	9	-183	7516	-174	-7516	5prime_fragment	FALSE	canonical	3	79	junction_2	14.3940091704848	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCCTCTAGCTCTCCAT	751	False	NA	NA	False	NA	NA	NA	41072799	41090434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203
transcript_120178.known	chr6	-	1188	5	FSM	ENSG00000124596.17	ENST00000628419.2	1188	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	125.412319968973	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGGTTCTGTGCTTATG	1098	False	NA	-6	True	AATAAA	-14	NA	41072577	41066792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41067438_41070075_41070135_41071131_41071277_41071595_41071676_41072318
transcript_120188.known	chr6	-	717	4	FSM	ENSG00000124596.17	ENST00000464633.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	162.980571439257	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTGTGTTTTTTTGTGG	7	True	NA	NA	False	NA	NA	NA	41072534	41067145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41067438_41071131_41071277_41071595_41071676_41072334
transcript_120195.known	chr6	-	401	3	FSM	ENSG00000124596.17	ENST00000471367.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	111	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAGAACCAAATGTTT	0	True	NA	-8	True	AATAAA	-21	NA	41072320	41071040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41071277_41071595_41071676_41072235
transcript_120196.known	chr6	-	704	3	FSM	ENSG00000124596.17	ENST00000469104.5	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	103.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGCTTTCTCTTCAAA	-3	True	NA	NA	False	NA	NA	NA	41072490	41070824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41071277_41071595_41071676_41072318
transcript_1202.known	chr1	+	1050	3	FSM	ENSG00000204859.13	ENST00000319084.9	1050	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAACGTTCTGTTTTTCTA	-13	True	NA	NA	False	CATAAA	-39	NA	6580000	6582299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6580050_6580540_6581300_6582057
transcript_120200.known	chr6	-	422	2	FSM	ENSG00000124596.17	ENST00000467234.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTCTCTAGCTGAT	1112	False	NA	NA	False	ATTAAA	-18	NA	41072563	41071498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41071676_41072318
transcript_120202.known	chr6	-	1194	5	FSM	ENSG00000161911.12	ENST00000373127.8	1194	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAATGGCTGAATGGGA	3	True	NA	NA	False	AATAAA	-21	NA	41154337	41149341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41149919_41150818_41150908_41151281_41151385_41153757_41154091_41154245
transcript_120203.known	chr6	-	983	5	FSM	ENSG00000095970.17	ENST00000373113.8	983	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTGGGCATCATGAAA	3	True	NA	NA	False	AATAAA	-26	NA	41163116	41158507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41158781_41158872_41159067_41159791_41159883_41161262_41161614_41163042
transcript_120206.known	chr6	-	419	2	FSM	ENSG00000234753.6	ENST00000414386.6	453	2	34	0	-7	0	multi-exon	FALSE	canonical	3	11	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATCGCCAGACCTGCT	-7	True	NA	0	True	ATTAAA	-28	NA	41546176	41523894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41524226_41546088
transcript_120207.known	chr6	-	404	2	FSM	ENSG00000234753.6	ENST00000439386.2	571	2	161	6	95	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATATCGCCAGACCTG	126	False	NA	-2	True	ATTAAA	-26	NA	41546074	41523896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41524226_41545999
transcript_120208.known	chr6	+	703	5	FSM	ENSG00000112559.15	ENST00000432027.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.233538996693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGCGACCTGGACTGC	NA	False	NA	NA	False	NA	NA	NA	41636881	41653474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41636934_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_120209.nic	chr6	+	1432	4	ISM	ENSG00000112559.15	ENST00000230321.11	1606	5	260	0	201	0	3prime_fragment	FALSE	canonical	3	138	junction_1	15.1730755689881	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCTCAGGACTCATGA	3	True	NA	13	True	AATAAA	-18	NA	41638727	41654244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_41638826_41646125_41646309_41649618_41649844_41653318
transcript_12021.known	chr1	+	2540	5	FSM	ENSG00000120370.14	ENST00000367763.8	2540	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	17.2536228079786	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATAGTGTCTTTCATTTA	3	True	NA	NA	False	AATAAA	-14	NA	170532165	170553834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_170532285_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_120210.known	chr6	+	650	3	FSM	ENSG00000112559.15	ENST00000435476.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	75.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCTGGCGAGTGTGCC	52	False	NA	NA	False	NA	NA	NA	41638526	41653444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41638826_41649618_41649844_41653318
transcript_120212.known	chr6	-	2333	9	FSM	ENSG00000112561.19	ENST00000373033.6	2333	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	4.41411089575239	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-15	True	NA	0	True	AGTAAA	-15	NA	41735608	41683977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41735349
transcript_120214.nnic	chr6	+	2228	3	FSM	ENSG00000268745.1_ENSG00000214736.8	ENST00000398884.7	637	3	-5	-1586	-5	7	multi-exon	FALSE	canonical	3	522	junction_2	428.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTCAAAAATTGATGAGTA	-21	True	NA	8	True	AATAAA	-17	NA	41787656	41791484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_120217.nnic	chr6	+	2201	3	FSM	ENSG00000268745.1_ENSG00000214736.8	ENST00000398881.4	565	3	-37	-1599	-5	17	multi-exon	FALSE	canonical	3	893	junction_2	243	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAGTAATCACTAATT	-21	True	NA	18	True	AATAAA	-27	NA	41787656	41791494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_120220.known	chr6	-	8940	8	FSM	ENSG00000164663.15	ENST00000682992.1	8940	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.77751862218068	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTGTGTGCGGTATTT	-4	True	NA	-16	True	AATAAA	-6	NA	41895375	41789895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41796724_41798723_41798930_41799829_41799939_41803805_41804011_41805627_41807012_41871563_41871638_41891793_41891876_41895323
transcript_120225.known	chr6	+	565	3	FSM	ENSG00000214736.8	ENST00000398881.4	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_2	243	8656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTATTCTTTTAATA	16	True	NA	31	True	AATAAA	-18	NA	41787693	41789895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_120226.known	chr6	+	637	3	FSM	ENSG00000214736.8	ENST00000398884.7	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	428.5	7609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTCTTTTAATAAGA	-16	True	NA	34	True	AATAAA	-21	NA	41787661	41789898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_120229.nic	chr6	-	2226	3	ISM	ENSG00000288721.1	ENST00000683313.1	1190	6	-2	98814	-2	-98814	5prime_fragment	FALSE	canonical	2	12	junction_1	158	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-14	True	NA	-20	True	AATAAA	-15	NA	41921141	41905353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_41907288_41916784_41916940_41921004
transcript_120230.known	chr6	-	3684	8	FSM	ENSG00000288721.1	ENST00000682596.1	3684	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	112.854430347149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGATGCTGTCTCAAAA	8	True	NA	NA	False	NA	NA	NA	41921119	41802507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41804011_41805627_41807012_41816082_41816150_41840892_41841007_41871563_41871638_41907015_41907288_41916784_41916940_41921004
transcript_120232.known	chr6	-	2478	4	FSM	ENSG00000124641.16	ENST00000265350.9	2478	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	2.62466929133727	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-12	True	NA	-20	True	AATAAA	-15	NA	41921139	41905353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41907288_41909268_41909523_41916784_41916940_41921004
transcript_120233.known	chr6	-	932	4	FSM	ENSG00000124641.16	ENST00000409312.5	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	150.156214952592	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACCTTGCCTCCTTTA	8	True	NA	NA	False	NA	NA	NA	41921119	41906803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41907288_41909344_41909523_41916784_41916940_41921004
transcript_120237.known	chr6	-	1481	3	FSM	ENSG00000124641.16	ENST00000482361.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	157	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGTGGCCACACTT	-12	True	NA	NA	False	AAAAAG	-20	NA	41921139	41906195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41907288_41909268_41909523_41921004
transcript_120242.known	chr6	+	1718	7	FSM	ENSG00000112578.10	ENST00000230340.9	1718	7	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_1	13.1497781983829	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTTGGTGTAGTC	-1	True	NA	24	True	GATAAA	-24	NA	41921498	41933046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_120245.known	chr6	+	1153	6	FSM	ENSG00000112578.10	ENST00000489290.1	1153	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	76.0010526242894	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTCCCCCGCGA	2	False	NA	NA	False	NA	NA	NA	41921533	41932655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41921831_41927373_41927537_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_120247.known	chr6	-	2233	5	FSM	ENSG00000112576.13	ENST00000372987.8	2233	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.097433517017	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	-4	True	NA	-24	True	AATAAA	-15	NA	41941519	41934955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41940951
transcript_120248.known	chr6	-	2026	5	FSM	ENSG00000112576.13	ENST00000372991.9	2026	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	8.31790237980706	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	0	True	NA	-20	True	AATAAA	-19	NA	41941808	41934951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41941451
transcript_120250.known	chr6	-	1843	4	FSM	ENSG00000112576.13	ENST00000415497.6	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	116.878854660142	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	NA	False	NA	-24	True	AATAAA	-15	NA	42048894	41934955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_42048500
transcript_120252.known	chr6	-	576	3	FSM	ENSG00000112576.13	ENST00000511686.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCCACCCACCTCCCTG	-1	True	NA	NA	False	NA	NA	NA	42048704	41935895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41936108_41937234_41937395_42048500
transcript_120272.known	chr6	+	1066	6	FSM	ENSG00000137413.17	ENST00000482926.1	1066	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	38.7215702160953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTTTTTTTAGAGGT	11	True	NA	NA	False	NA	NA	NA	42050538	42063759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388_42057514_42063185
transcript_120274.known	chr6	+	794	5	FSM	ENSG00000137413.17	ENST00000372978.7	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	13.1220234720107	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTATCTTTCATAAT	NA	False	NA	5	True	AATAAA	-23	NA	42050512	42057789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388
transcript_120276.nnic	chr6	+	820	5	NNC	ENSG00000137413.17	novel	794	5	NA	NA	-9	-3	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	42.4403993854912	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAGATTATCTTTCAT	NA	False	NA	2	True	AATAAA	-20	NA	42050503	42057786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056035_42057388
transcript_120278.known	chr6	+	719	4	ISM	ENSG00000137413.17	ENST00000372978.7	794	5	11	1438	0	-32	5prime_fragment	FALSE	canonical	3	90	junction_3	9.03081145609604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTTTGTAAATAAAGTC	-4	True	NA	NA	False	NA	NA	NA	42050523	42056351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951
transcript_12028.known	chr1	+	2160	8	FSM	ENSG00000010932.17	ENST00000354841.4	2160	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.49829835452879	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCTTTTGTTCTCTTAT	18	False	NA	NA	False	AATAAA	-22	NA	171257956	171285974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171258220_171267542_171267732_171275345_171275509_171278728_171278872_171280785_171280986_171281977_171282334_171283143_171283217_171285201
transcript_120284.known	chr6	-	894	3	FSM	ENSG00000188112.9	ENST00000356542.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	3	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCTCATG	-4	True	NA	54	True	AATAAA	-32	NA	42142619	42126376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42126844_42128671_42128779_42142299
transcript_120287.known	chr6	-	6385	5	FSM	ENSG00000188112.9	ENST00000341865.9	6385	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	38.2197592875727	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGACGTCATACTTTTAG	-5	True	NA	-29	True	CATAAA	-20	NA	42142620	42101118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42103879_42104462_42107584_42110215_42110292_42128671_42128779_42142299
transcript_120288.known	chr6	+	2520	3	FSM	ENSG00000048545.17	ENST00000679182.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	4	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGCAAGCACGGTGAA	128	False	NA	NA	False	NA	NA	NA	42178099	42181338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42178430_42178801_42178896_42179242
transcript_120294.known	chr6	-	2100	7	FSM	ENSG00000048544.6	ENST00000053468.4	2100	7	0	0	0	0	multi-exon	TRUE	canonical	3	729	junction_5	52.1272481529574	1877	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	1	True	NA	-10	True	ATTAAA	-26	NA	42217861	42206806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214193_42214279_42214345_42217801
transcript_120297.known	chr6	-	4174	16	FSM	ENSG00000124496.12	ENST00000340840.6	4174	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	32.2396581178454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAATAATTGGCACAA	946	False	NA	-34	True	TTTAAA	-27	NA	42451261	42228148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42228670_42232680_42232929_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362946_42363080_42451176
transcript_120299.known	chr6	-	7646	18	FSM	ENSG00000124496.12	ENST00000541110.5	7646	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	21.9407822074654	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTAAATATTTCT	156	False	NA	-1	True	AATAAA	-20	NA	42452051	42224930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42228670_42232680_42232893_42236204_42236412_42243247_42243362_42246455_42246545_42254850_42254927_42256727_42256832_42256962_42257103_42258134_42258202_42259338_42259724_42263259_42263569_42264703_42264855_42265750_42265798_42268153_42269849_42300637_42300750_42362996_42363080_42451176_42451262_42452020
transcript_1203.known	chr1	+	3632	4	FSM	ENSG00000116273.6	ENST00000377648.5	3632	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	6.53197264742181	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAATTGTGTTTCTTTTC	-16	True	NA	58	True	NA	NA	NA	6613730	6624030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6614106_6616756_6616859_6619802_6620338_6621410
transcript_120300.known	chr6	+	7891	47	FSM	ENSG00000024048.11	ENST00000372901.2	7891	47	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_7	26.1906273369398	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGTTAGCATATATCT	19	True	NA	6	True	AATAAA	-21	NA	42564028	42693505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42564398_42573733_42573994_42592150_42592230_42594190_42594305_42603587_42603719_42605720_42605860_42606588_42606652_42612170_42612292_42615070_42615179_42616001_42616091_42617408_42617508_42632551_42632716_42632804_42632905_42635417_42635547_42637010_42637195_42640208_42640271_42641581_42641693_42642415_42642482_42644213_42644337_42644472_42644537_42645465_42645591_42648117_42648171_42650283_42650387_42652022_42652072_42652490_42652646_42655620_42655724_42658023_42658134_42658239_42658321_42658645_42658825_42659655_42659856_42662183_42662278_42663257_42663420_42665408_42665513_42666166_42666246_42670091_42670241_42670659_42670716_42673790_42673888_42674125_42674194_42676055_42676192_42676782_42676874_42678538_42678670_42679723_42679833_42683054_42683112_42684793_42684872_42688215_42688387_42689568_42689671_42691031
transcript_120309.nic	chr6	+	817	2	ISM	ENSG00000024048.11	ENST00000372903.6	2423	12	-63	46200	-30	-46200	5prime_fragment	FALSE	canonical	3	92	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGTAATTATTCTTG	-11	True	NA	NA	False	AATAAA	-14	NA	42563998	42574151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_42564398_42573733
transcript_12031.known	chr1	+	2303	10	FSM	ENSG00000076258.10	ENST00000367749.4	2303	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4.71404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTCCCCACCCAAATC	1	True	NA	7	True	AATAAA	-19	NA	171314182	171342084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708_171332909_171334410_171334764_171337355_171337426_171341412
transcript_120310.known	chr6	-	1606	1	FSM	ENSG00000124659.7	ENST00000372876.2	1606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGGGTTTGTTTGGTGT	970	False	42746121	-19	True	AATAAA	-17	NA	42746103	42744497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42744500_42746100
transcript_120322.known	chr6	+	1103	6	FSM	ENSG00000146223.16	ENST00000483998.6	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	216.098681162102	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCGTGGTGGCTCATG	-21	True	NA	NA	False	AAGAAA	-13	NA	42879617	42887301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255_42886471_42887159
transcript_12033.nic	chr1	+	1501	7	ISM	ENSG00000076258.10	ENST00000367749.4	2303	10	-54	8937	-54	0	5prime_fragment	TRUE	canonical	3	12	junction_3	2.68741924943285	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGCTGTTACAAATA	NA	False	NA	2	True	AATAAA	-15	NA	171314128	171333147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708
transcript_120332.nic	chr6	+	1517	5	ISM	ENSG00000146223.16	ENST00000483998.6	1103	6	-16	291	-14	0	5prime_fragment	FALSE	canonical	3	69	junction_1	201.525432638166	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	NA	False	NA	NA	False	NA	NA	NA	42879601	42887010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_42879952_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_120336.known	chr6	+	1702	6	FSM	ENSG00000146223.16	ENST00000397415.7	1702	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	195.525548202786	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	0	True	NA	NA	False	NA	NA	NA	42879638	42887010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42879952_42880860_42881083_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_120337.known	chr6	+	703	5	FSM	ENSG00000146223.16	ENST00000602561.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	60.2966624283633	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAAGTTTGGCGTC	8	True	NA	1	True	AATAAA	-21	NA	42879932	42886249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973
transcript_120338.known	chr6	-	557	1	FSM	ENSG00000221821.4	ENST00000408925.4	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	563	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCCAGAATGATTTT	5	True	NA	-11	True	AATAAA	-17	NA	42890821	42890264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42890300_42890800
transcript_120353.nnic	chr6	+	1624	5	NIC	ENSG00000137161.18	novel	1431	6	NA	NA	-317	0	combination_of_known_splicesites	FALSE	canonical	3	63	junction_1	223.438330418037	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	-2	True	NA	48	True	NA	NA	NA	42929162	42939294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_42929722_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_120364.known	chr6	-	653	2	FSM	ENSG00000287825.2	ENST00000667155.2	660	2	0	7	0	-7	multi-exon	FALSE	canonical	3	35	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTTGGTGGCTCAC	5	True	NA	NA	False	AATAAA	-27	NA	42929457	42928286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42928647_42929164
transcript_120365.known	chr6	+	1431	6	FSM	ENSG00000137161.18	ENST00000372836.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	80.8613628378844	2200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	-1	True	NA	48	True	NA	NA	NA	42929479	42939294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42929722_42934474_42934599_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_120367.known	chr6	-	421	1	FSM	ENSG00000181524.6	ENST00000326586.6	421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTAAGGCTGGAGTGCA	NA	False	NA	NA	False	AAAAAG	-34	NA	42956765	42956344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42956300_42956800
transcript_120369.known	chr6	+	1076	6	FSM	ENSG00000124713.6	ENST00000372808.4	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3.18747549010185	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTGTTTATTTATGT	1	True	NA	12	True	AATATA	-20	NA	42960753	42963880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42960974_42962211_42962340_42962761_42962879_42963071_42963215_42963327_42963450_42963534
transcript_120377.known	chr6	+	2894	16	FSM	ENSG00000112640.16	ENST00000394110.7	2894	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	120.269253482897	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	-21	True	NA	22	True	AATAAA	-16	NA	42984552	43012342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42984705_42989610_42989689_43006462_43006607_43006933_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_120378.known	chr6	+	2973	16	FSM	ENSG00000112640.16	ENST00000485511.6	2973	16	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_6	43.2725727864147	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	-4	True	NA	22	True	AATAAA	-16	NA	42984569	43012342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42984705_42989610_42989689_43006462_43006680_43006910_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_120388.known	chr6	-	1124	4	FSM	ENSG00000124733.5	ENST00000642748.1	1124	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	729.480637165922	3256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGCTTGGGGCACCGCT	-8	True	NA	-29	True	AATAAA	-16	NA	43014279	43012093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43014061
transcript_120391.known	chr6	+	1869	11	FSM	ENSG00000124702.19	ENST00000326974.9	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_4	41.3202129713776	3961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGTGTTTTTGTGG	2	True	NA	30	True	ATTAAA	-10	NA	43014248	43021294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_120392.known	chr6	-	1004	4	FSM	ENSG00000124733.5	ENST00000643776.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_3	284.713891477041	7764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTCCCTGCTTCCTT	2882	False	NA	-17	True	AATAAA	-28	NA	43013983	43012081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013897
transcript_120393.known	chr6	+	1494	12	NNC	ENSG00000124702.19	novel	1869	11	NA	NA	6	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	435.248746206557	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTGTTGTGTGTTTTTG	8	True	NA	27	True	ATTAAA	-7	NA	43014254	43021291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666_43020726_43021091
transcript_120396.known	chr6	+	1005	1	FSM	ENSG00000124541.7	ENST00000607555.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGGTCTTTGCTTGG	552	False	NA	11	True	TATAAA	-8	NA	43033151	43034156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43033200_43034200
transcript_120397.known	chr6	+	1183	7	FSM	ENSG00000124541.7	ENST00000244496.6	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_4	17.2763486368568	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTCTGTTTTTTGTG	-5	True	NA	26	True	CATAAA	-18	NA	43021622	43029599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43021785_43024984_43025133_43025262_43025330_43026036_43026142_43027177_43027253_43027359_43027478_43029091
transcript_120399.known	chr6	+	2770	17	FSM	ENSG00000137171.15	ENST00000394056.6	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	30.6369236991902	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCTGTGACTTGAGT	252	False	NA	6	True	AATAAA	-11	NA	43059894	43075087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43060277_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_120403.known	chr6	+	2361	16	FSM	ENSG00000137171.15	ENST00000347162.10	2361	16	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	12.3504385887034	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	-12	True	NA	12	True	AATAAA	-17	NA	43059630	43075093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_120404.known	chr6	+	2602	16	FSM	ENSG00000137171.15	ENST00000479388.5	2602	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	26.3814749819305	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGACTTGAGTCC	240	False	NA	8	True	AATAAA	-13	NA	43059882	43075089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43060183_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_120424.known	chr6	-	905	2	FSM	ENSG00000112651.12	ENST00000487429.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTCAAGACCAGCCTGG	-15	True	NA	NA	False	NA	NA	NA	43059421	43057570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43058234_43059179
transcript_120426.known	chr6	-	409	1	FSM	ENSG00000272170.1	ENST00000606123.1	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATTATTTAATACTTT	NA	False	NA	1	True	ATTAAA	-23	NA	43074739	43074330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43074300_43074700
transcript_120427.known	chr6	-	1216	7	FSM	ENSG00000112651.12	ENST00000388752.8	1216	7	0	0	0	0	multi-exon	TRUE	canonical	3	379	junction_1	43.1804997140556	2666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTTCTGACTTTGG	26	False	43059460	NA	False	AATAAA	-15	NA	43059434	43054028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43054487_43055544_43055619_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_120428.known	chr6	-	570	3	FSM	ENSG00000112651.12	ENST00000489623.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	197	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTACTGTGGTTTT	26	False	43059460	NA	False	AATAAA	-20	NA	43059434	43054234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43054487_43058064_43058234_43059285
transcript_120429.known	chr6	-	899	6	FSM	ENSG00000112651.12	ENST00000230413.9	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	163.767396022529	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTGTGGTTTTGTT	12	True	NA	NA	False	AATAAA	-23	NA	43059394	43054231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43054487_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_120430.known	chr6	-	661	5	FSM	ENSG00000112651.12	ENST00000480286.1	661	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	45.6316775935314	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAAGGAGTTGCCTGGGT	0	True	NA	NA	False	AATATA	-18	NA	43059406	43055891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_120431.known	chr6	+	1251	6	FSM	ENSG00000137171.15	ENST00000458460.6	1251	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	6.28012738724303	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTGTAAGGACAATAT	10	True	NA	NA	False	AATAAA	-22	NA	43059652	43067397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995
transcript_120432.known	chr6	+	5282	19	FSM	ENSG00000112655.16	ENST00000487673.5	5282	19	0	0	0	0	multi-exon	TRUE	canonical	3	804	junction_5	63.5419565870739	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTTCTGAGATTCAT	16	False	NA	13	True	AATAAA	-15	NA	43076368	43161713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43076568_43128976_43129265_43129726_43129830_43130229_43130421_43130510_43130662_43132015_43132165_43132420_43132688_43138848_43138983_43139135_43139272_43139405_43139526_43141667_43141818_43141930_43142082_43142171_43143621_43144450_43144607_43145199_43145433_43146617_43146699_43158816_43158969_43159787_43159967_43160720
transcript_120433.known	chr6	+	902	2	FSM	ENSG00000112655.16	ENST00000476760.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCACAGAGCCTCGAGGT	0	True	NA	NA	False	NA	NA	NA	43076306	43129617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43076568_43128976
transcript_120435.nic	chr6	+	814	2	ISM	ENSG00000112659.14	ENST00000451399.5	2572	5	-11	3920	-11	-3920	5prime_fragment	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGATTAATAGGCTATTT	-24	True	NA	NA	False	NA	NA	NA	43182172	43185038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_43182250_43184301
transcript_120439.known	chr6	-	654	4	FSM	ENSG00000112667.13	ENST00000230431.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_3	27.0102861065105	2854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-11	True	NA	-5	True	ATTAAA	-21	NA	43229481	43225628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229260
transcript_120440.known	chr6	-	796	3	FSM	ENSG00000112667.13	ENST00000393987.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_2	31.5	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTTTCTGTCTTGTG	-8	True	NA	-11	True	ATTAAA	-15	NA	43229478	43225634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43226144_43226326_43226396_43229260
transcript_120446.known	chr6	+	127	1	FSM	ENSG00000219222.1	ENST00000406185.1	127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	NA	False	NA	-40	True	NA	NA	NA	43310230	43310357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43310200_43310400
transcript_120447.known	chr6	-	991	8	FSM	ENSG00000146215.14	ENST00000372569.8	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	27.8230560682969	673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-6	True	NA	-15	True	AATAAA	-14	NA	43308826	43305471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_120449.nic	chr6	+	554	2	ISM	ENSG00000124574.15	ENST00000372530.9	5043	22	3	22120	3	-3869	5prime_fragment	FALSE	canonical	3	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGCCTTCTCTGAGTC	-16	True	NA	NA	False	NA	NA	NA	43427543	43428307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_43427758_43427967
transcript_120450.nic	chr6	+	492	2	ISM	ENSG00000124574.15	ENST00000502549.1	478	4	0	3869	0	-3869	5prime_fragment	TRUE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGCCTTCTCTGAGTC	-12	True	NA	NA	False	NA	NA	NA	43427547	43428307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_43427700_43427967
transcript_120453.known	chr6	+	2720	10	FSM	ENSG00000137221.14	ENST00000259751.5	2720	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	40.9661106552992	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-6	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498922_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_120454.nic	chr6	+	2675	10	NIC	ENSG00000137221.14	novel	2720	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	76	junction_3	23.2814237399267	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-13	True	NA	14	True	AATAAA	-15	NA	43477565	43506553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_120457.known	chr6	+	2665	10	FSM	ENSG00000137221.14	ENST00000372452.5	2665	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	24.0251925391496	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-6	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_120460.nic	chr6	+	2625	10	NIC	ENSG00000137221.14	novel	2720	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	16	junction_1	42.0158700175699	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	-13	True	NA	14	True	AATAAA	-15	NA	43477565	43506553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_43477629_43478136_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_120462.known	chr6	+	2572	9	FSM	ENSG00000137221.14	ENST00000436109.6	2572	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	45.2023229491583	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	9995	False	NA	17	True	AATAAA	-18	NA	43477522	43506556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43477629_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_120466.known	chr6	+	2778	11	FSM	ENSG00000137221.14	ENST00000372444.6	2778	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	46.2017315692821	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	9995	False	NA	17	True	AATAAA	-18	NA	43477522	43506556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43477629_43478086_43478233_43478658_43478719_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_120467.known	chr6	-	5323	32	FSM	ENSG00000124571.18	ENST00000265351.12	5323	32	0	0	0	0	multi-exon	FALSE	canonical	1	166	junction_9	68.5294470987984	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	-24	True	NA	-3	True	AGTAAA	-22	NA	43576038	43522333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
transcript_120487.known	chr6	-	1444	9	FSM	ENSG00000137207.12	ENST00000506469.5	1444	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	142.423170077765	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCCCCACCTACCCCT	-16	True	NA	-128	True	NA	NA	NA	43516941	43511927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516114_43516726
transcript_120488.known	chr6	-	1321	9	FSM	ENSG00000137207.12	ENST00000490447.6	1321	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	143.41025067965	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGGCCAGTCCTC	12	False	NA	-70	True	NA	NA	NA	43516972	43512158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516191_43516726
transcript_1205.known	chr1	-	3201	16	FSM	ENSG00000007923.17	ENST00000377577.10	3201	16	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_5	89.3486554024302	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGGCGCTCTTCCGTG	-3	True	NA	-13	True	AATAAA	-16	NA	6701816	6634169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6639901_6640058_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_120516.known	chr6	-	882	1	FSM	ENSG00000219470.1	ENST00000402069.1	882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	283	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	43539703	43538821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43538800_43539700
transcript_120517.known	chr6	+	1275	9	FSM	ENSG00000171453.20	ENST00000642195.1	1275	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	23.5660640540588	3580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	-7	True	NA	6	True	AATAAA	-19	NA	43517088	43521513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_120518.known	chr6	+	1334	9	FSM	ENSG00000171453.20	ENST00000645141.1	1334	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	110.164649502461	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	1	True	NA	6	True	AATAAA	-19	NA	43517096	43521513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519906_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_120519.known	chr6	+	1119	8	FSM	ENSG00000171453.20	ENST00000372344.6	1119	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	114.987488227979	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTTTTTGAGACTA	-8	True	NA	-1	True	AATAAA	-12	NA	43517087	43521506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520931_43521049_43521181
transcript_120520.known	chr6	+	1280	9	FSM	ENSG00000171453.20	ENST00000304004.7	1280	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	110.391066214617	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTATTAATAAGGGTC	-7	True	NA	NA	False	AAAAAG	-17	NA	43517088	43529585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43529248
transcript_120521.known	chr6	+	1725	6	FSM	ENSG00000171453.20	ENST00000481352.6	1725	6	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_5	5.41848687365763	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAGATGTAAATAAACTCA	7813	False	NA	-28	True	CATAAA	-28	NA	43517053	43521479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43520428_43520624_43520775_43520931
transcript_120525.nnic	chr6	+	1300	5	NNC	ENSG00000170734.12	novel	8368	11	NA	NA	-34	4627	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6.29980158417708	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGTCTATTTCTGTATG	-14	True	NA	15	True	ATTAAA	-17	NA	43576150	43592027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_43576441_43582315_43582457_43583006_43583142_43587271_43587595_43591616
transcript_120526.nnic	chr6	+	1046	4	NNC	ENSG00000170734.12	novel	8368	11	NA	NA	-34	-2400	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	6.79869268479038	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAATTTAGCTAGACA	-14	True	NA	NA	False	ATTAAA	-14	NA	43576150	43585000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_43576441_43582315_43582457_43583006_43583142_43584520
transcript_120528.nnic	chr6	+	576	2	NNC	ENSG00000170734.12	novel	331	3	NA	NA	-32	-10088	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCTTCCTATTCTTGC	-12	True	NA	NA	False	AGTAAA	-19	NA	43576152	43577312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_43576441_43577024
transcript_120529.nic	chr6	-	1927	2	ISM	ENSG00000172432.19	ENST00000476510.5	2816	11	4385	4	172	0	3prime_fragment	FALSE	canonical	3	68	junction_1	0	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTGCTTATGCGTTA	8678	False	NA	-12	True	AATAAA	-15	NA	43622632	43620493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_43621791_43622002
transcript_12053.known	chr1	+	1931	12	FSM	ENSG00000117523.18	ENST00000476522.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	12.7849343156133	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	-2	True	NA	-31	True	AAAAAG	-9	NA	171485550	171532792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_120530.known	chr6	+	8368	11	FSM	ENSG00000170734.12	ENST00000372236.9	8368	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	2.42693221990232	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTGTATTTAAATATA	20	True	NA	NA	False	AATAAA	-22	NA	43576184	43620523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43576441_43582315_43582457_43583006_43583142_43587271_43587490_43597695_43597866_43600987_43601092_43603891_43604012_43604614_43604739_43605253_43605320_43610553_43610724_43613659
transcript_120535.known	chr6	+	1517	4	FSM	ENSG00000124688.14	ENST00000451025.6	1517	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	143.799242773466	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAGATTCTTATTA	47	False	NA	-10	True	AATATA	-1	NA	43629539	43640919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43629770_43633193_43633316_43636380_43636647_43640020
transcript_120537.known	chr6	+	1269	3	FSM	ENSG00000124688.14	ENST00000372171.5	1269	3	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	10	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGAAATTGTTTTGA	-2	True	NA	12	True	AATAAA	-16	NA	43635839	43640941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43635922_43636380_43636647_43640020
transcript_12054.known	chr1	+	1919	12	NNC	ENSG00000117523.18	novel	1931	12	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	17.7326332221623	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAAGAACTA	-2	True	NA	24	True	AAGAAA	-7	NA	171485550	171532775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517585_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_120540.known	chr6	+	2545	5	FSM	ENSG00000172426.16	ENST00000372163.5	2545	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.1650635094611	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCCATCCTTCATTC	2	True	NA	NA	False	AATAAA	-17	NA	43645035	43672600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43645326_43650374_43650541_43655561_43655692_43656576_43656724_43670788
transcript_12055.known	chr1	-	1738	9	FSM	ENSG00000117533.15	ENST00000474047.5	1738	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	50.4876222454574	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTAAATGCTTTTGTC	5	True	NA	NA	False	AATGAA	-2	NA	171742060	171701091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_171702085_171704386_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_120553.known	chr6	-	1163	6	FSM	ENSG00000096080.12	ENST00000372133.8	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_2	37.992630864419	2335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTTGTCACCTT	0	True	NA	99	True	AAGAAA	-15	NA	43687791	43671201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43671907_43675201_43675272_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_120554.known	chr6	-	785	5	FSM	ENSG00000096080.12	ENST00000372116.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	300.616449982365	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGGACAGGAGTTTTG	0	True	NA	-61	True	GGGGCT	-15	NA	43687791	43671509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43671907_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_120557.known	chr6	+	993	7	FSM	ENSG00000112715.26	ENST00000230480.10	993	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	169.730832660291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATATATATAAAAATAAA	4	True	NA	NA	False	NA	NA	NA	43771991	43784935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43772102_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43781955_43782088_43784540
transcript_120560.nic	chr6	+	1788	6	NIC	ENSG00000112715.26	novel	993	7	NA	NA	-24	-601	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	196.256362954173	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGAGTAGGGTTTTTTT	-20	True	NA	14	True	ATTAAA	-14	NA	43771967	43785838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_43772102_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43784540
transcript_120562.known	chr6	+	1683	4	FSM	ENSG00000112715.26	ENST00000476772.5	1683	4	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	24.589970855344	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGTTGCTCCATAATA	NA	False	NA	NA	False	ATTAAA	-24	NA	43770183	43778764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43771313_43774340_43774393_43777468_43777666_43778459
transcript_120580.known	chr6	-	957	3	FSM	ENSG00000180992.7	ENST00000372014.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_2	163.5	6932	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGTTTTTATTTTTC	7	True	NA	0	True	TATAAA	-23	NA	44127452	44113450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44114210_44116540_44116630_44127343
transcript_120582.known	chr6	+	828	2	FSM	ENSG00000262179.3	ENST00000573382.3	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGCTTTGAAAGTCTA	-3	True	NA	9	True	AATAAA	-19	NA	44216925	44218234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44216969_44217449
transcript_120588.known	chr6	+	2283	14	FSM	ENSG00000112759.19	ENST00000371713.6	2283	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	806.219110687578	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	12	True	NA	79	True	AATAAA	-18	NA	44219635	44234142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44219783_44221585_44221686_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_120589.known	chr6	+	2358	14	FSM	ENSG00000112759.19	ENST00000651428.1	2358	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	778.926069974043	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTGTTTTTTTCTC	3	True	NA	61	True	TTTAAA	-4	NA	44219552	44234124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44219783_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_120595.known	chr6	+	1998	13	FSM	ENSG00000112759.19	ENST00000652680.1	1998	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	623.375683721747	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTCCATTCTCCCC	4	True	NA	123	True	NA	NA	NA	44219627	44233946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44219783_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_12061.known	chr1	-	1193	8	FSM	ENSG00000117533.15	ENST00000367740.2	1193	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.6915145276642	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCAGTAAATATATTTT	-9	True	NA	-34	True	ACTAAA	-3	NA	171742074	171703949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719219_171728523_171728571_171738348_171738464_171741909
transcript_120615.known	chr6	+	2083	13	FSM	ENSG00000112759.19	ENST00000371755.9	2083	13	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_1	289.070925552882	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	16	True	NA	79	True	AATAAA	-18	NA	44223594	44234142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_120616.known	chr6	+	2301	14	FSM	ENSG00000112759.19	ENST00000371724.6	2301	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	781.121724143551	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	2	True	NA	78	True	AATAAA	-17	NA	44223799	44234141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44223956_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_12062.known	chr1	-	586	8	FSM	ENSG00000117533.15	ENST00000482519.1	586	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	57.228150629649	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGACAGAGATCTTCAT	0	True	NA	NA	False	NA	NA	NA	171742065	171704504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710759_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_120636.known	chr6	+	2555	12	FSM	ENSG00000096384.20	ENST00000371646.10	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	11124	junction_7	1247.81411520935	30344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	0	True	NA	35	True	AATAAA	-21	NA	44247100	44253883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44247196_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_120637.known	chr6	-	2063	4	FSM	ENSG00000157593.19	ENST00000619636.4	2063	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	189.520447445652	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	8275	False	NA	-25	True	ATTAAA	-18	NA	44257352	44254101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257181
transcript_120638.known	chr6	-	2022	4	FSM	ENSG00000157593.19	ENST00000393812.4	2022	4	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	17.6131264181639	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCCTGTGTTTTGGTT	-10	True	NA	-24	True	ATTAAA	-19	NA	44257528	44254100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257399
transcript_120641.known	chr6	-	1909	3	FSM	ENSG00000157593.19	ENST00000538577.5	1909	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	178	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	8056	False	NA	-25	True	ATTAAA	-18	NA	44257571	44254101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44255645_44256684_44256879_44257399
transcript_120644.known	chr6	-	4798	22	FSM	ENSG00000124608.5	ENST00000244571.5	4798	22	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_16	12.8120903783866	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGGCCCGCCTGGCATC	-17	True	NA	-20	True	AGTAAA	-14	NA	44313347	44298730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
transcript_120647.known	chr6	+	6241	16	FSM	ENSG00000096401.8	ENST00000371477.4	6241	16	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_10	23.9707228834584	437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCCTTTTATGTTTA	-4	True	NA	NA	False	ATTAAA	-19	NA	44387705	44450425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654_44445868_44446606
transcript_120652.nnic	chr6	-	1248	11	NNC	ENSG00000196284.17	novel	4211	11	NA	NA	-50	49	intron_retention	TRUE	non_canonical	0	0	junction_9	52.4409191376353	188	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGGAGTGGGCTGGTC	NA	False	NA	-8	True	AATAAA	-23	NA	45378003	44829717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45231448_45231566_45377823
transcript_120653.known	chr6	-	4211	11	FSM	ENSG00000196284.17	ENST00000371459.6	4211	11	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	14.2534206420775	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTACTTGTTTAGAAT	-12	True	NA	NA	False	AATAAA	-32	NA	45377934	44826725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45365200_45365302_45377767
transcript_120658.nnic	chr6	-	1072	9	NNC	ENSG00000196284.17	novel	3941	9	NA	NA	43095	49	intron_retention	FALSE	canonical	1	5	junction_8	42.2492603485552	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGGAGTGGGCTGGTC	NA	False	NA	-8	True	AATAAA	-23	NA	45062913	44829717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45062707
transcript_120682.nic	chr6	-	586	3	NIC	ENSG00000196284.17	novel	396	3	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	59	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATGTGTAGTCCCAGC	NA	False	NA	NA	False	AATAAA	-18	NA	45378070	45250954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_45251137_45365200_45365302_45377767
transcript_120685.known	chr6	-	1377	12	FSM	ENSG00000196284.17	ENST00000475057.5	1377	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	36.2235939731355	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTCAACTTGTCAGTGG	-31	True	NA	NA	False	AATGAA	-35	NA	45377953	44809316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44809502_44829763_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45365200_45365302_45377767
transcript_120686.nic	chr6	+	494	3	NIC	ENSG00000124813.23	novel	464	3	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCCACAATGTGTATGT	12	False	NA	NA	False	AATAAA	-24	NA	45328257	45372055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_45328461_45328660_45328785_45371888
transcript_120689.known	chr6	-	1817	3	FSM	ENSG00000231769.4	ENST00000669498.1	1817	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAATTAAACCTCTT	NA	False	NA	NA	False	NA	NA	NA	46129857	46096003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46097347_46102539_46102660_46129503
transcript_120692.known	chr6	+	4644	4	FSM	ENSG00000001561.7	ENST00000321037.5	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	3.68178700572909	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTCACTGGTGATT	2	True	NA	103	True	AATAAA	-40	NA	46129988	46146688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_46130190_46139550_46140410_46141051_46141223_46143275
transcript_120698.known	chr6	-	3845	5	FSM	ENSG00000112796.10	ENST00000371383.7	3845	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	22.6163657557973	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATCATCATT	-16	True	NA	-11	True	AATAAA	-23	NA	46170980	46159184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170052_46170115_46170807
transcript_120704.known	chr6	-	2544	4	FSM	ENSG00000112796.10	ENST00000230565.3	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	11.1455023315337	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAATTGGATAAAACA	-7	True	NA	NA	False	ATTAAA	-20	NA	46170971	46160414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170807
transcript_120708.nic	chr6	-	1926	4	ISM	ENSG00000112796.10	ENST00000371383.7	3845	5	12	5540	3	232	5prime_fragment	FALSE	canonical	3	16	junction_2	25.694789787469	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTACATACAGATAA	-4	True	NA	NA	False	AATAAA	-1	NA	46170968	46164724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46165564_46167433_46168298_46170052_46170115_46170807
transcript_12071.nnic	chr1	-	552	3	NNC	ENSG00000117533.15	novel	4977	8	NA	NA	-17	-27594	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAAAGTTCTAGATTTT	-26	True	NA	NA	False	AATAAA	-18	NA	171742091	171732098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_171732354_171738348_171738464_171741909
transcript_120710.nic	chr6	-	1335	4	ISM	ENSG00000112796.10	ENST00000371383.7	3845	5	12	6131	3	-359	5prime_fragment	FALSE	canonical	3	16	junction_2	25.694789787469	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGTTTATTGATTGA	-4	True	NA	NA	False	AATACA	-18	NA	46170968	46165315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46165564_46167433_46168298_46170052_46170115_46170807
transcript_120711.nic	chr6	-	1881	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	-14	4310	-5	232	5prime_fragment	FALSE	canonical	3	54	junction_2	8.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTACATACAGATAA	20	False	46171005	NA	False	AATAAA	-1	NA	46170985	46164724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46165564_46167433_46168298_46170807
transcript_120713.nic	chr6	-	1290	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	-14	4901	-5	-359	5prime_fragment	FALSE	canonical	3	54	junction_2	8.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGTTTATTGATTGA	20	False	46171005	NA	False	AATACA	-18	NA	46170985	46165315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46165564_46167433_46168298_46170807
transcript_120715.nic	chr6	-	878	2	ISM	ENSG00000112796.10	ENST00000371383.7	3845	5	12	10213	3	-4441	5prime_fragment	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTCTTCAGCTTAGG	-4	True	NA	NA	False	NA	NA	NA	46170968	46169397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46170115_46170807
transcript_120716.nic	chr6	-	603	3	ISM	ENSG00000172348.16	ENST00000330430.10	3188	4	76769	2312	76769	-2310	3prime_fragment	FALSE	canonical	3	101	junction_2	16	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTTGTTTGAGATTC	NA	False	NA	-2	True	TTTAAA	-9	NA	46248899	46223047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46223302_46246747_46246920_46248722
transcript_120719.known	chr6	-	2432	12	FSM	ENSG00000146233.8	ENST00000275016.3	2432	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	2.49627822140836	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGTAGTGGAATCTAT	-14	True	NA	NA	False	AATATA	-18	NA	46652818	46549579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46550438_46553766_46553855_46587076_46587166_46588033_46588130_46595986_46596121_46625417_46625509_46630962_46631071_46636388_46636483_46637828_46637979_46639493_46639669_46642162_46642299_46652405
transcript_120722.known	chr6	-	2269	11	FSM	ENSG00000146233.8	ENST00000619708.4	2269	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.96816441593117	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGTAGTGGAATCTAT	13	False	NA	NA	False	AATATA	-18	NA	46652830	46549579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46550438_46553766_46553855_46587076_46587166_46588033_46588130_46595986_46596121_46625417_46625509_46630962_46631071_46636388_46636483_46637828_46637979_46642162_46642299_46652405
transcript_120727.known	chr6	-	1915	12	FSM	ENSG00000146070.17	ENST00000274793.12	1915	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	13.4600725748046	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTGCAATGATACAAGA	12	True	NA	NA	False	ATTAAA	-23	NA	46735375	46704200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46722782_46722926_46735179
transcript_120730.nnic	chr6	-	1410	11	NIC	ENSG00000146070.17	novel	1915	12	NA	NA	25	-221	combination_of_known_splicesites	FALSE	canonical	3	9	junction_10	11.2004464196745	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTTTCAAAACTGTCT	369	False	NA	-10	True	ATTAAA	-16	NA	46735350	46704537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46735179
transcript_120737.nic	chr6	+	1531	9	NIC	ENSG00000153291.16	novel	2926	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	8.13076718397471	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTGTTGAAGGAAGGTG	0	True	NA	2	True	AATAAA	-14	NA	46652918	46677003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_46653299_46655842_46656035_46658961_46659047_46662375_46662499_46664773_46664887_46668708_46668794_46670134_46670228_46671125_46671229_46676646
transcript_120739.known	chr6	-	3595	6	FSM	ENSG00000146072.6	ENST00000296861.2	3595	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	15.7175061635108	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGTAGTCCGAGTATAT	1	True	NA	-18	True	AATAAA	-17	NA	47309905	47231531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_47232995_47234669_47234899_47253255_47253522_47283937_47284433_47285943_47286596_47309415
transcript_120740.known	chr6	-	330	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAGTCTCTTGTCAG	517	False	NA	-23	True	AATAAA	-15	NA	47477572	47477242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_47477200_47477600
transcript_120741.known	chr6	+	5412	18	FSM	ENSG00000198087.7	ENST00000359314.5	5412	18	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_9	31.6906544245251	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACCCGTATGACTTT	23	True	NA	NA	False	AATAAA	-24	NA	47477788	47627263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523_47576603_47577008_47577104_47579384_47579490_47580863_47580901_47582002_47582066_47595860_47596027_47599300_47599444_47606164_47606278_47607926_47608029_47609122_47609305_47612472_47612537_47624185
transcript_120747.known	chr6	+	548	2	FSM	ENSG00000198087.7	ENST00000486693.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	47607871	47609513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_47608029_47609122
transcript_120748.known	chr6	-	25280	5	FSM	ENSG00000244694.8	ENST00000339488.9	25280	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGTGTGGCTCTTTCCT	-21	True	NA	NA	False	ATTAAA	-17	NA	48111197	47856672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_47879937_48008633_48009115_48068229_48068642_48068952_48069927_48111048
transcript_120753.known	chr6	-	3811	13	FSM	ENSG00000146085.8	ENST00000274813.4	3811	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	20.637580338359	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTGACAGTATCTTT	-29	True	NA	-9	True	AATAAA	-20	NA	49463253	49430359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463102
transcript_120765.known	chr6	+	1741	9	FSM	ENSG00000031691.7	ENST00000335783.4	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	30.1700907356939	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	-22	True	NA	80	True	AATAAA	-20	NA	49463369	49493107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_120767.nnic	chr6	+	1737	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-48	-71	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	51.2054684579684	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTATACTGTCTTGGG	NA	False	NA	9	True	TATAAA	-18	NA	49463321	49493036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_120768.nnic	chr6	+	1808	9	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	51.2054684579684	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	NA	False	NA	80	True	AATAAA	-20	NA	49463321	49493107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_12077.known	chr1	+	3368	8	FSM	ENSG00000010165.20	ENST00000361735.4	3368	8	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_4	16.4577380844739	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGAATTTTGTCTTT	-24	True	NA	14	True	ATTAAA	-16	NA	171781659	171797716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_120773.nic	chr6	+	475	5	ISM	ENSG00000031691.7	ENST00000335783.4	1741	9	-57	20280	-57	-20280	5prime_fragment	FALSE	canonical	3	125	junction_1	39.8528543519784	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATACCATCTCAACTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49463312	49472827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789
transcript_120774.nnic	chr6	+	485	5	NNC	ENSG00000031691.7	novel	1741	9	NA	NA	-48	-20280	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	70.2117333499181	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATACCATCTCAACTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	49463321	49472827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_49463454_49470139_49470279_49470973_49471029_49472062_49472184_49472789
transcript_120777.nic	chr6	+	227	2	ISM	ENSG00000031691.7	ENST00000335783.4	1741	9	-57	22863	-57	-22863	5prime_fragment	FALSE	canonical	3	125	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAATGAGGAAGTTGTGT	NA	False	NA	19	True	AAAAAG	-19	NA	49463312	49470244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_49463454_49470158
transcript_120805.known	chr6	-	408	1	FSM	ENSG00000060303.5	ENST00000498293.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCTGCAATGCTGTA	25	False	NA	NA	False	NA	NA	NA	50857662	50857254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_50857300_50857700
transcript_120814.known	chr6	-	3068	17	FSM	ENSG00000112118.20	ENST00000596288.7	3068	17	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_6	191.805148115868	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	-9	True	NA	-11	True	AATAAA	-23	NA	52284742	52264014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_120816.known	chr6	-	2523	16	FSM	ENSG00000112118.20	ENST00000419835.8	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_15	681.767083068371	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTCGTCTCTGAACTTG	NA	False	NA	NA	False	NA	NA	NA	52284881	52264585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52284596
transcript_12082.known	chr1	+	3022	8	FSM	ENSG00000010165.20	ENST00000362019.7	3022	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	110.230926435629	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGAATTTTGTCTTTC	-2	True	NA	15	True	ATTAAA	-17	NA	171781681	171797717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171781796_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_120823.known	chr6	-	3208	17	FSM	ENSG00000112118.20	ENST00000616552.4	3208	17	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_6	191.805148115868	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGTCATAGTGTGTT	NA	False	NA	-10	True	AATAAA	-24	NA	52284881	52264013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_120828.known	chr6	+	6849	11	FSM	ENSG00000096093.16	ENST00000371068.11	6849	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	9.8264947972306	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGACTCTCCATCCT	-17	True	NA	33	True	AATAAA	-30	NA	52420341	52497198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_120832.known	chr6	+	1829	10	FSM	ENSG00000096093.16	ENST00000636379.1	1829	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.0052578328237	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGATTGGTGCCTTA	20	True	NA	4	True	ACTAAA	-14	NA	52420378	52492503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_120833.known	chr6	+	2089	9	FSM	ENSG00000096093.16	ENST00000637263.1	2089	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	10.2225241501304	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTCATGTGTATT	26	True	NA	4	True	CATAAA	-16	NA	52420313	52480139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639
transcript_120839.known	chr6	+	1896	6	FSM	ENSG00000096093.16	ENST00000637200.1	1896	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.9809711939578	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATATCAGTCATATAT	-34	True	NA	NA	False	NA	NA	NA	52420253	52453543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52429968_52430132_52430227_52430375_52438303_52438592_52452687
transcript_120846.known	chr6	+	3509	11	FSM	ENSG00000096093.16	ENST00000635911.1	3509	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.1837309535863	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAGAGGCATTTACAGG	-10	True	NA	-2	True	AATACA	-11	NA	52420277	52492409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423686_52423815_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_12085.nic	chr1	+	2648	7	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	-202	56	intron_retention	FALSE	canonical	3	28	junction_4	119.289097946497	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGGTTGGTTTGTCT	8348	False	NA	29	True	AATAAA	-31	NA	171781457	171796959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171792016_171792236_171794395_171794528_171796481
transcript_120850.nnic	chr6	+	1498	4	NIC	ENSG00000096093.16	novel	2089	9	NA	NA	10	78	intron_retention	FALSE	canonical	1	1	junction_3	39.3389826451518	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATTGTGTTTATATT	NA	False	NA	NA	False	NA	NA	NA	52420216	52453634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_52420474_52423945_52424168_52438303_52438376_52452687
transcript_120852.known	chr6	+	4004	10	FSM	ENSG00000096093.16	ENST00000637340.1	4004	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	8.14831649657738	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGATCTAAGATTGGT	NA	False	NA	-2	True	ACTAAA	-8	NA	52419742	52492497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_120859.nnic	chr6	-	1333	2	Antisense	novelGene_ENSG00000096093.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACACACTTTGAAGAG	NA	False	NA	NA	False	ATTAAA	-17	NA	52420998	52417905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_52418449_52420208
transcript_120861.nnic	chr6	-	1145	2	Antisense	novelGene_ENSG00000096093.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATGGCAAGTTTAAC	NA	False	NA	NA	False	AAAAAG	-12	NA	52420998	52418093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_52418449_52420208
transcript_120863.known	chr6	+	2133	11	FSM	ENSG00000096093.16	ENST00000637089.1	2133	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	25.4025589262184	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATACACTCCTTAAGTT	1	True	NA	-3	True	AATAAA	-12	NA	52420288	52495768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52495608
transcript_120864.known	chr6	+	1893	4	FSM	ENSG00000225791.7	ENST00000666938.1	1893	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.8847423745107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAATGCTAAAATTGAC	NA	False	NA	1	True	AATAAA	-2	NA	52577213	52583974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52577652_52578285_52578394_52579374_52579610_52582862
transcript_120865.known	chr6	+	2744	3	FSM	ENSG00000225791.7	ENST00000663931.1	2744	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	NA	False	NA	7	True	AATAAA	-8	NA	52577203	52583980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52578595_52579374_52579610_52582862
transcript_120866.known	chr6	+	2500	3	FSM	ENSG00000225791.7	ENST00000606714.6	2500	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAAATTGATCTGCTTTT	NA	False	NA	20	True	AATAAA	-21	NA	52577259	52583993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52578394_52579374_52579610_52582862
transcript_120867.known	chr6	+	3589	3	FSM	ENSG00000216775.4	ENST00000643631.2	3591	3	0	2	0	-2	multi-exon	FALSE	canonical	3	73	junction_2	14.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTATTTTATTTT	148	False	NA	20	True	AATAAA	-16	NA	52664365	52669153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52665420_52666388_52666519_52666748
transcript_120868.known	chr6	+	3757	2	FSM	ENSG00000216775.4	ENST00000602367.2	3757	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATTTTATTTTGT	0	True	NA	22	True	AATAAA	-18	NA	52664429	52669155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52665420_52666388
transcript_120875.nnic	chr6	+	937	5	NNC	ENSG00000096092.6	novel	988	5	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	107.019857970379	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	-32	True	NA	17	True	AATAAA	-18	NA	52671093	52686588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_52671176_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_120876.known	chr6	+	988	5	FSM	ENSG00000096092.6	ENST00000211314.5	988	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_3	19.0065778087482	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	-13	True	NA	17	True	AATAAA	-18	NA	52671112	52686588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52671246_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_120879.known	chr6	-	1221	7	FSM	ENSG00000244067.3	ENST00000493422.3	1221	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7.34090518184841	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTGTCTGCTGTGGAT	0	True	NA	NA	False	GATAAA	-31	NA	52763475	52750086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52750700_52751576_52751709_52752853_52752996_52754942_52755076_52756257_52756310_52757860_52757978_52763443
transcript_120883.known	chr6	-	1218	7	FSM	ENSG00000243955.6	ENST00000334575.6	1218	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.22812904711937	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGATTCTGTCTGCTGTG	-1	True	NA	NA	False	GATAAA	-28	NA	52803816	52791370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52791981_52792855_52792988_52794124_52794267_52796181_52796315_52797585_52797638_52799180_52799298_52803784
transcript_120890.known	chr6	-	1240	7	FSM	ENSG00000170899.11	ENST00000370963.9	1240	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	17.4037033096088	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	27	True	NA	-14	True	AATAAA	-17	NA	52995284	52977952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994262_52995248
transcript_120891.nnic	chr6	-	1412	7	NNC	ENSG00000170899.11	novel	1240	7	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	62.0796978801354	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-5	True	NA	-14	True	AATAAA	-17	NA	52995316	52977952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994402_52995248
transcript_120899.known	chr6	-	1127	6	FSM	ENSG00000170899.11	ENST00000477599.5	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.4726611302682	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	7	True	NA	-14	True	AATAAA	-17	NA	52995304	52977952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52987356_52987409_52994156_52994262_52995248
transcript_120911.known	chr6	+	1580	13	FSM	ENSG00000112146.17	ENST00000370939.7	1580	13	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	125.798339505028	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCTAAGTTATAAATGTG	14	False	NA	28	True	ATTAAA	-18	NA	53064997	53097888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_53065209_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_120912.known	chr6	+	4743	13	FSM	ENSG00000112146.17	ENST00000323557.12	4743	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	98.8078944214479	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCATACTTCTTGTAT	-8	True	NA	5	True	AATAAA	-17	NA	53065403	53100873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_120918.known	chr6	-	6146	14	FSM	ENSG00000112144.16	ENST00000676107.1	6146	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	8.11893833966693	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGAGTGTTCTGTTT	-19	True	NA	NA	False	AATAAA	-19	NA	53061824	53001302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53061595
transcript_12092.known	chr1	+	815	4	ISM	ENSG00000197959.15	ENST00000485254.3	2911	21	537546	0	-8170	0	3prime_fragment	FALSE	canonical	2	7	junction_3	4.92160768674447	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTGTGTTCTGTTTCTT	402	False	NA	NA	False	AATAAA	-25	NA	172379017	172418466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_172379183_172387132_172387360_172388572_172388810_172418280
transcript_120922.known	chr6	-	2765	8	FSM	ENSG00000012660.14	ENST00000304434.11	2765	8	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_4	32.7326835353989	2948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTGCATTTTACAT	-12	True	NA	-16	True	ATTAAA	-14	NA	53348950	53267403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_120923.known	chr6	-	580	3	FSM	ENSG00000012660.14	ENST00000370913.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	406.5	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAGATTTGTGTGTATT	12	True	NA	-17	True	AATAAA	-32	NA	53348926	53294087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53294492_53295641_53295708_53348816
transcript_120924.known	chr6	-	3785	16	FSM	ENSG00000001084.13	ENST00000650454.1	3785	16	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_11	22.3262675389825	1497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTGTGTGTGAGTT	-1	True	NA	-4	True	AATAAA	-28	NA	53545101	53497340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
transcript_120933.known	chr6	-	1782	6	FSM	ENSG00000227885.3	ENST00000666996.1	1782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.41660919471891	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATAGGGTTTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	53794840	53740630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53741339_53744218_53744365_53746515_53746604_53746908_53747014_53793282_53793350_53794172
transcript_120937.known	chr6	-	1213	4	FSM	ENSG00000227885.3	ENST00000648812.1	1213	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTCAGCAGTTTTTTTT	465	False	NA	NA	False	AATAAA	-1	NA	53793709	53745731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53793540
transcript_120938.known	chr6	-	514	4	FSM	ENSG00000227885.3	ENST00000662688.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATTTCAAAGATGT	NA	False	NA	NA	False	AATAAA	-19	NA	53794319	53746408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53794172
transcript_120939.known	chr6	-	1424	3	FSM	ENSG00000227885.3	ENST00000661706.1	1424	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGAACCTTTTTTATT	NA	False	NA	NA	False	AGTAAA	-2	NA	53794379	53746381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53746604_53746908_53747014_53793282
transcript_120941.nnic	chr6	-	984	3	NIC	ENSG00000227885.3	novel	514	4	NA	NA	10	0	intron_retention	FALSE	canonical	0	0	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATTTCAAAGATGT	NA	False	NA	NA	False	AATAAA	-19	NA	53794894	53746408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_53746604_53793282_53793350_53794172
transcript_120943.known	chr6	-	3695	2	FSM	ENSG00000227885.3	ENST00000657329.1	3695	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATGTACTTGAAAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	53794904	53739265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53741339_53793282
transcript_120945.nic	chr6	+	1080	4	ISM	ENSG00000168143.9	ENST00000306858.8	6244	5	-122	17359	-122	-17359	5prime_fragment	FALSE	canonical	2	10	junction_3	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	54846648	54927740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_54846827_54870186_54870691_54926370_54926536_54927507
transcript_120950.nic	chr6	+	1749	2	ISM	ENSG00000168143.9	ENST00000306858.8	6244	5	-122	73342	-122	-73342	5prime_fragment	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTATAG	NA	False	NA	NA	False	NA	NA	NA	54846648	54871757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_54846827_54870186
transcript_120951.known	chr6	+	6244	5	FSM	ENSG00000168143.9	ENST00000306858.8	6244	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	0.707106781186548	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTAAGCTATTGTTT	12	True	NA	NA	False	AATAAA	-32	NA	54846770	54945099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_54846827_54870186_54870691_54926370_54926536_54927507_54927633_54939705
transcript_120952.known	chr6	+	1571	7	FSM	ENSG00000137252.10	ENST00000370862.4	1571	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTCAACTTTTGATT	-4	True	NA	NA	False	AATAAA	-19	NA	55174514	55282617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_55174811_55248638_55248818_55255135_55255380_55263706_55263823_55277379_55277601_55280322_55280445_55282224
transcript_120953.known	chr6	-	2449	9	FSM	ENSG00000146151.14	ENST00000274901.9	2449	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTACTGATTATGTTGCA	-4	True	NA	NA	False	AATAAA	-20	NA	55579192	55434372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_55435764_55439433_55439560_55495418_55495608_55499235_55499300_55514047_55514197_55516507_55516604_55541728_55541837_55542059_55542141_55578947
transcript_120954.nic	chr6	-	2348	5	ISM	ENSG00000146151.14	ENST00000274901.9	2449	9	50	77956	24	-254	5prime_fragment	FALSE	canonical	1	1	junction_1	0.82915619758885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTACTTCAATATGTGT	46	False	NA	NA	False	AATAAA	-18	NA	55579142	55512328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_55514197_55516507_55516604_55541728_55541837_55542059_55542141_55578947
transcript_120955.known	chr6	-	3970	7	FSM	ENSG00000112175.8	ENST00000370830.4	3970	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.897527467855751	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATGAATTAAAGATTTTC	1	True	NA	NA	False	ATTAAA	-16	NA	55875590	55753652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_55755683_55759004_55759116_55760456_55760534_55774048_55774244_55794278_55794428_55819654_55819848_55874375
transcript_120956.known	chr6	-	4173	30	FSM	ENSG00000124749.17	ENST00000244728.10	4173	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	6.49082403633238	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	-24	True	NA	NA	False	AATAAA	-18	NA	56247580	56056589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124293_56125566_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56164813_56164823_56166905_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
transcript_120959.known	chr6	-	4598	34	ISM	ENSG00000151914.22	ENST00000520645.6	17436	93	0	156465	0	133	5prime_fragment	TRUE	canonical	0	0	junction_32	4.33089569072383	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAACATGTTGAAAAAGC	256	False	NA	NA	False	AAGAAA	-3	NA	56851951	56614463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_56614485_56624529_56624629_56625156_56625265_56627203_56627288_56627998_56628162_56629249_56629444_56630244_56630384_56631210_56631390_56631882_56632041_56632853_56633038_56634131_56634259_56634461_56634617_56634800_56634954_56635588_56635715_56636556_56636653_56639258_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56645865_56645994_56646086_56646183_56648569_56648690_56650925_56651033_56651131_56651245_56670640_56670808_56699652_56699746_56701887_56701966_56704279_56704370_56735227_56735290_56851396_56851605_56851787
transcript_120964.known	chr6	+	3497	4	FSM	ENSG00000151917.18	ENST00000370748.7	3497	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.65685424949238	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATATAAGGGAGTTAATA	-3	True	NA	NA	False	AATAAA	-15	NA	56955125	57010944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_56955461_56981710_56981931_56992377_56992556_57008180
transcript_120968.known	chr6	+	2789	4	FSM	ENSG00000168116.14	ENST00000370733.5	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	58.7896438347965	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGGCTCTTGTCTTT	-1	True	NA	24	True	AATAAA	-25	NA	57046692	57055225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57046777_57047312_57047397_57050773_57050855_57052685
transcript_120972.nic	chr6	+	823	3	ISM	ENSG00000168116.14	ENST00000370733.5	2789	4	-180	3977	-19	-1798	5prime_fragment	FALSE	canonical	3	147	junction_1	68	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATCGTTAAACTTTCAG	NA	False	NA	NA	False	NA	NA	NA	57046512	57051248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_57046777_57047312_57047397_57050773
transcript_120973.known	chr6	+	2883	3	FSM	ENSG00000168116.14	ENST00000545356.5	2883	3	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	62.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCTCATTTCCATATC	NA	False	NA	38	True	AATAAA	-39	NA	57046531	57055239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57046777_57047312_57047397_57052685
transcript_120976.known	chr6	+	5088	15	FSM	ENSG00000112200.17	ENST00000370706.9	5088	15	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_7	60.5099502696264	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTATCTTTTCATTAC	26	True	NA	14	True	AGTAAA	-20	NA	57090187	57170305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_120982.known	chr6	-	2546	7	FSM	ENSG00000112210.12	ENST00000317483.4	2546	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	65.4974554213113	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTCATTATATT	9	True	NA	NA	False	AATAAA	-18	NA	57221407	57188782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221318
transcript_120983.known	chr6	-	4830	7	FSM	ENSG00000112210.12	ENST00000468148.6	4830	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	24.9109525220445	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGATATGTATGAT	-20	True	NA	0	True	AATAAA	-19	NA	57222307	57186991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221725
transcript_120989.known	chr6	+	375	4	FSM	ENSG00000112200.17	ENST00000370710.10	375	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	184.575789913581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCCCTTTAACCTTGTC	45	False	NA	NA	False	NA	NA	NA	57090206	57099610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57099468
transcript_120992.known	chr6	+	9478	4	FSM	ENSG00000112200.17	ENST00000370708.8	9478	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	169.534657223825	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTCTTTTCTCAAGTAC	-1	True	NA	NA	False	ATTAAA	-20	NA	57090075	57109716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57100602
transcript_120993.known	chr6	+	4998	14	FSM	ENSG00000112200.17	ENST00000357489.7	4998	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	92.1278376037257	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGACTTTAATTTAG	NA	False	NA	15	True	ATTAAA	-17	NA	57090029	57170201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_120997.known	chr6	+	719	5	FSM	ENSG00000112200.17	ENST00000510483.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	113.652980603238	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGGACATTTGAAAAGGTAA	NA	False	NA	NA	False	NA	NA	NA	57090009	57133176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57099060_57099142_57124733_57124860_57128728_57128841_57133041
transcript_120998.known	chr6	+	6651	3	FSM	ENSG00000112208.11	ENST00000370693.5	6651	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	16.5	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGGTTTTATAAGTG	6	True	NA	5	True	AATAAA	-16	NA	57172325	57189833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57172811_57182031_57182142_57183777
transcript_121.known	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1678	junction_4	2400.71232918482	12882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
transcript_1210.known	chr1	-	2210	15	FSM	ENSG00000007923.17	ENST00000294401.11	2210	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	204.244151616118	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTTGGAAATTAGTCGT	NA	False	NA	NA	False	TATAAA	-24	NA	6701924	6635112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_121002.known	chr6	+	2561	16	FSM	ENSG00000146143.19	ENST00000672107.1	2561	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	63.2671232860234	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	7	True	NA	27	True	AATAAA	-13	NA	57317629	57646850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57398004_57398123_57402128_57402269_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_121007.known	chr6	+	2303	14	FSM	ENSG00000146143.19	ENST00000615550.5	2303	14	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	15.7960372530394	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	7	True	NA	27	True	AATAAA	-13	NA	57317629	57646850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_121016.nic	chr6	+	1239	11	NIC	ENSG00000146143.19	novel	2303	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	42.708898370246	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTCTTTTCTTGCC	-15	True	NA	NA	False	ATTAAA	-16	NA	57317607	57587111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57586995
transcript_121024.known	chr6	+	2197	7	FSM	ENSG00000146143.19	ENST00000419977.4	2197	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	5.7662812973354	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCATGTGGGATGAAG	5	True	NA	NA	False	AAAAAG	-27	NA	57317627	57383589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030
transcript_121028.known	chr6	+	1266	6	FSM	ENSG00000146143.19	ENST00000671770.1	1266	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	53.7564879805219	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCCTGTTATTTA	7	True	NA	NA	False	AATAAA	-17	NA	57317629	57378976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57378250
transcript_12103.nnic	chr1	-	928	3	NIC	ENSG00000135845.10	novel	1661	5	NA	NA	-71	-617	combination_of_known_splicesites	FALSE	canonical	2	12	junction_2	10.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCCAATGATAAATTT	2890	False	NA	NA	False	AATAAA	-21	NA	172444157	172393750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_172394411_172399818_172399917_172443987
transcript_121032.known	chr6	+	2259	5	FSM	ENSG00000225096.3	ENST00000641671.1	2259	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTCATTCGTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	57961437	57973690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57961743_57962180_57962249_57965516_57965744_57971594_57971657_57972093
transcript_121036.known	chr6	-	675	7	FSM	ENSG00000283352.1	ENST00000637710.1	675	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	8.24621125123532	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGATGTTCAGTGAAGAGT	4	True	NA	NA	False	NA	NA	NA	57961382	57919911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57919920_57924416_57924592_57926425_57926511_57930103_57930292_57959027_57959112_57961151_57961225_57961320
transcript_121039.known	chr6	-	1666	6	FSM	ENSG00000215190.9	ENST00000418368.1	1666	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.30555310817378	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	6	True	NA	-6	True	AATAAA	-20	NA	57961380	57946077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57947178_57948872_57949069_57949858_57950012_57959027_57959112_57961151_57961225_57961320
transcript_121041.known	chr6	-	1088	5	FSM	ENSG00000215190.9	ENST00000418765.6	1088	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.63216876123687	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACAAGCCTGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	57961424	57946546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57947178_57948872_57949069_57959027_57959112_57961151_57961225_57961320
transcript_121042.known	chr6	-	181	3	FSM	ENSG00000215190.9	ENST00000635948.1	181	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGAAGTTCAGATATTT	41	False	NA	NA	False	AAAACA	-4	NA	57961345	57959028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57959112_57961151_57961225_57961320
transcript_121043.known	chr6	+	2711	7	FSM	ENSG00000283453.2	ENST00000649835.1	2711	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.1567119807864	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAGGAGATACTATCTA	NA	False	NA	NA	False	NA	NA	NA	60353962	60546660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_60354205_60400250_60400319_60430386_60430573_60499332_60499460_60504611_60504695_60531219_60531289_60544724
transcript_121050.known	chr6	-	2329	9	FSM	ENSG00000112232.10	ENST00000281156.5	2329	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	59.6896923681133	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTAAGCTTTATCTTGC	-29	True	NA	-13	True	AATAAA	-15	NA	62286225	61679960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_61681061_61697194_61697254_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_121051.nnic	chr6	-	1763	9	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	0	-20298	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	46.8954955192927	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATACCACTTGATGCTGT	-29	True	NA	-9	True	AATAAA	-15	NA	62286225	61700258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_61700778_61707329_61707404_61732681_61732765_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_121056.nnic	chr6	-	1754	7	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	0	-69056	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	63.3377191463875	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAAAGAAAG	-29	True	NA	NA	False	NA	NA	NA	62286225	61749016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_61749684_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_121057.nnic	chr6	-	1510	7	NNC	ENSG00000112232.10	novel	2403	10	NA	NA	0	-147045	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	57.9475337410201	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTCAATTATTTCCT	-29	True	NA	0	True	AGTAAA	-18	NA	62286225	61827005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_61827429_61894634_61894834_61901243_61901372_61978065_61978213_62047877_62047995_62177184_62177313_62285857
transcript_12106.known	chr1	-	744	2	FSM	ENSG00000135845.10	ENST00000478184.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTGATCTCATTGAT	3101	False	NA	NA	False	NA	NA	NA	172443946	172442330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_172442831_172443702
transcript_121063.known	chr6	+	392	2	FSM	ENSG00000217067.2	ENST00000405686.2	392	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTGAATCTTTCTGCA	NA	False	NA	NA	False	NA	NA	NA	62547426	62548272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_62547568_62548021
transcript_121065.known	chr6	+	4628	6	FSM	ENSG00000285976.2	ENST00000370651.7	4628	6	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_5	61.2418157797432	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGATTTTATTTTCAG	147	False	NA	5	True	AATAAA	-17	NA	63572471	63583587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63572720_63576435_63576986_63578436_63578530_63578897_63579029_63579256_63579332_63580056
transcript_121066.known	chr6	-	1404	1	FSM	ENSG00000266680.1	ENST00000584934.1	1404	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTAAAATCTTAAATTC	1189	False	NA	NA	False	AATAAA	-18	NA	63572408	63571004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_63571000_63572400
transcript_121068.known	chr6	+	18797	16	FSM	ENSG00000118482.12	ENST00000262043.8	18797	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	35.8040345336791	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATACTTTATTTCATAT	-18	True	NA	NA	False	ATTAAA	-15	NA	63635801	63726011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63636151_63646526_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
transcript_12107.known	chr1	-	2630	1	FSM	ENSG00000135845.10	ENST00000367728.1	2630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	11	True	NA	-4	True	ATTAAA	-16	NA	172444086	172441456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_172441500_172444100
transcript_121070.known	chr6	+	2787	6	FSM	ENSG00000118482.12	ENST00000481385.6	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	35.0108554594143	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAAGTTGAAAA	3	True	NA	13	True	NA	NA	NA	63635822	63698245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222
transcript_121074.known	chr6	+	3074	14	FSM	ENSG00000118482.12	ENST00000515594.5	3074	14	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	43.7078791320839	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAAGACAGCTTCAGG	5	True	NA	NA	False	AGTAAA	-9	NA	63635824	63712363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63636151_63679999_63680162_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
transcript_121076.known	chr6	+	2854	6	FSM	ENSG00000118482.12	ENST00000494284.6	2854	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	44.8713717196165	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAAAAAAGTGAAAAAA	16	True	NA	NA	False	NA	NA	NA	63635835	63694690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63636151_63646618_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580
transcript_121079.nnic	chr6	+	2531	3	NIC	ENSG00000118482.12	novel	18797	16	NA	NA	-27	-1	combination_of_known_splicesites	FALSE	canonical	1	5	junction_2	13.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATTTTTCTTTTGAAG	-15	True	NA	10	True	AATAAA	-21	NA	63636083	63686323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_63636151_63646526_63646796_63684128
transcript_12108.known	chr1	-	1456	2	FSM	ENSG00000135845.10	ENST00000344529.5	1456	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	1	True	NA	-4	True	ATTAAA	-16	NA	172444069	172441456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_172442831_172443987
transcript_121080.known	chr6	+	3700	12	FSM	ENSG00000118482.12	ENST00000506783.5	3700	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	36.8974455430631	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAGCATCAGGA	0	True	NA	NA	False	NA	NA	NA	63635819	63709214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63636151_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150
transcript_121081.known	chr6	+	7124	17	FSM	ENSG00000118482.12	ENST00000509876.5	7124	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	49.5477988915754	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGTGTGACTTGAA	12	True	NA	14	True	GATAAA	-16	NA	63636110	63714454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63636151_63646526_63646796_63678827_63679021_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
transcript_121082.known	chr6	+	6947	15	FSM	ENSG00000118482.12	ENST00000393387.5	6947	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	28.0076520156291	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACCTTCAGACATTGAT	9964	False	NA	9	True	AGTAAA	-23	NA	63646525	63714509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
transcript_121085.nnic	chr6	+	387	3	Antisense	novelGene_ENSG00000188107.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_2	1	125	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACAGGTTTACATATTTG	NA	False	NA	30	True	AATAAA	-42	NA	64878480	64916496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_64878581_64886655_64886769_64916322
transcript_121087.nnic	chr6	+	602	3	Antisense	novelGene_ENSG00000188107.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_2	1	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACCGTGTGACTTTTTGA	NA	False	NA	NA	False	ATTAAA	-17	NA	64878480	64916711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_64878581_64886655_64886769_64916322
transcript_121090.known	chr6	+	1433	3	FSM	ENSG00000285838.2	ENST00000647954.1	1433	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGAGATGTTCATATT	NA	False	NA	NA	False	NA	NA	NA	68040289	68083574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_68040599_68040840_68040942_68082551
transcript_121092.known	chr6	-	888	4	FSM	ENSG00000230910.5	ENST00000667769.1	888	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGCTTTCATTGGTCT	178	False	NA	NA	False	ATTAAA	-21	NA	68634993	68632662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_68633057_68634184_68634259_68634464_68634725_68634833
transcript_121094.nic	chr6	-	1185	3	NIC	ENSG00000230910.5	novel	888	4	NA	NA	49	0	intron_retention	FALSE	canonical	0	0	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGCTTTCATTGGTCT	87	False	NA	NA	False	ATTAAA	-21	NA	68635084	68632662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_68633057_68634184_68634725_68634833
transcript_121095.known	chr6	-	2365	1	FSM	ENSG00000230910.5	ENST00000604392.1	2365	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGCTTTCATTGGTCT	144	False	NA	NA	False	ATTAAA	-21	NA	68635027	68632662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_68632700_68635000
transcript_12110.known	chr1	+	5625	24	FSM	ENSG00000094975.14	ENST00000263688.4	5625	24	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	29.4625455095398	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGCTCTTCTGTCTTT	1	True	NA	33	True	AATAAA	-23	NA	172533149	172611833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172585017_172585087_172585857_172585949_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
transcript_121101.known	chr6	-	1934	16	FSM	ENSG00000168216.13	ENST00000648743.1	1934	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	82.60562262273	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAATCATGCTATGTAA	-2	True	NA	NA	False	TTTAAA	-3	NA	69796608	69675972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796413
transcript_121102.known	chr6	-	3900	16	FSM	ENSG00000168216.13	ENST00000649934.3	3900	16	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	34.7118935749054	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGTGGCATTTTGT	-17	True	NA	NA	False	AATAAA	-19	NA	69797010	69674009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_121110.known	chr6	-	1973	17	FSM	ENSG00000168216.13	ENST00000649011.1	1973	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	105.608282700743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATAGTGTTAAATTG	-3	True	NA	-47	True	NA	NA	NA	69796906	69675898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69748223_69748290_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_121113.known	chr6	-	3051	32	FSM	ENSG00000112280.18	ENST00000320755.12	3051	32	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_28	12.6477943275797	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	56	False	NA	-10	True	ATTAAA	-14	NA	70283209	70216039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_12112.nic	chr1	+	1190	7	ISM	ENSG00000094975.14	ENST00000616058.4	5495	22	-16	42689	-16	-1371	5prime_fragment	FALSE	canonical	3	146	junction_2	35.1378238749452	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAAGTATTTGAGTTC	24	False	NA	48	True	AAAAAG	-7	NA	172533101	172569142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018
transcript_121127.nic	chr6	+	2000	16	NIC	ENSG00000082269.17	novel	6215	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	42.1025203785025	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAATTAATAAAACA	19	True	NA	NA	False	AATGAA	-11	NA	70413514	70524599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342
transcript_12113.nic	chr1	+	1079	6	ISM	ENSG00000094975.14	ENST00000610051.5	2925	23	-81	41137	-16	-1371	5prime_fragment	FALSE	canonical	3	74	junction_2	61.7297335163534	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAAGTATTTGAGTTC	24	False	NA	48	True	AAAAAG	-7	NA	172533101	172569142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_172533498_172551511_172551627_172555868_172556024_172557279_172557418_172557643_172557795_172569018
transcript_12114.nic	chr1	+	2009	3	ISM	ENSG00000094975.14	ENST00000616058.4	5495	22	-16	57074	-16	2605	5prime_fragment	FALSE	canonical	3	146	junction_2	45	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGTATCTCATTAATTT	24	False	NA	NA	False	AAAAAG	-4	NA	172533101	172554757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_172533498_172551511_172551627_172553259
transcript_121140.known	chr6	+	1926	14	FSM	ENSG00000082269.17	ENST00000515323.5	1926	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	55.2370898461763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAATTAATAAAACA	-71	True	NA	NA	False	AATGAA	-11	NA	70413424	70524599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70413703_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342
transcript_121147.nic	chr6	+	1825	10	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-70	77917	0	-22218	5prime_fragment	FALSE	canonical	3	106	junction_3	31.4925035171512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATGCCATTTGTAGC	12	True	NA	NA	False	AATAAA	-18	NA	70413507	70482742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
transcript_121148.nic	chr6	+	2071	10	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-93	77694	-23	-21995	5prime_fragment	FALSE	canonical	3	106	junction_3	31.4925035171512	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAATCTGTATTCTT	-11	True	NA	NA	False	AATAAA	-21	NA	70413484	70482965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
transcript_12115.known	chr1	+	756	2	FSM	ENSG00000094975.14	ENST00000608566.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTGAAGTAATTTATA	74	False	NA	NA	False	NA	NA	NA	172533382	172552152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_172533498_172551511
transcript_121172.nic	chr6	+	1591	4	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-53	131123	10	1192	5prime_fragment	FALSE	canonical	3	106	junction_3	33.5095342982992	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAAAAAGAATATTTA	29	True	NA	NA	False	AATAAA	-3	NA	70413524	70429536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303
transcript_121175.nnic	chr6	+	887	3	NNC	ENSG00000082269.17	novel	595	4	NA	NA	1	-8972	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	87.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCTGTATACCCTTTAC	-74	True	NA	NA	False	AATAAA	-16	NA	70413421	70417799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70413703_70415290_70415377_70417279
transcript_121176.nic	chr6	+	1373	3	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-53	133112	10	776	5prime_fragment	FALSE	canonical	3	110	junction_2	34.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAATATTGTAAAACT	29	True	NA	NA	False	NA	NA	NA	70413524	70427547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290_70415377_70426438
transcript_121177.nic	chr6	+	1277	3	ISM	ENSG00000082269.17	ENST00000514185.5	529	5	549	797	-18	776	internal_fragment	FALSE	canonical	3	37	junction_2	71	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTAATATTGTAAAACT	-6	True	NA	NA	False	NA	NA	NA	70413489	70427547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290_70415377_70426569
transcript_121178.nic	chr6	+	426	2	ISM	ENSG00000082269.17	ENST00000508844.5	595	4	-92	11336	1	-11336	5prime_fragment	FALSE	canonical	3	179	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGTTCCTTATTCAAAG	-74	True	NA	NA	False	NA	NA	NA	70413421	70415435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290
transcript_121180.known	chr6	+	6215	22	FSM	ENSG00000082269.17	ENST00000418814.7	6215	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	37.9479294754526	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTAATCCTTTGCTTA	12	True	NA	26	True	AATAAA	-34	NA	70413507	70561174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
transcript_121192.known	chr6	+	332	2	FSM	ENSG00000154079.6	ENST00000468640.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAATTTTATTTATTTA	-3	True	NA	62	True	AATACA	-23	NA	70566916	70567659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70567005_70567415
transcript_121193.known	chr6	+	1183	3	FSM	ENSG00000154079.6	ENST00000370474.4	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	6	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	10	True	NA	19	True	AATAAA	-16	NA	70566929	70589569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70567005_70579413_70579567_70588614
transcript_121195.known	chr6	+	2403	10	FSM	ENSG00000112305.15	ENST00000316999.9	2403	10	0	0	0	0	multi-exon	TRUE	canonical	3	222	junction_4	47.9351413659935	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTCATTTGTGGGTTT	-18	True	NA	17	True	ATTAAA	-14	NA	70667775	70861166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_121204.nic	chr6	+	553	4	ISM	ENSG00000112305.15	ENST00000370452.7	2491	11	109	87741	2	-18344	5prime_fragment	FALSE	canonical	3	311	junction_1	20.4178571081514	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACCTTCATCTC	-12	True	NA	NA	False	GATAAA	-22	NA	70667884	70773425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349
transcript_121207.known	chr6	+	3150	11	FSM	ENSG00000112305.15	ENST00000619054.4	3150	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	133.274941380591	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGGTGTACTTCTC	529	False	NA	10	True	AATAAA	-18	NA	70668529	70862011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70668717_70732377_70732512_70754979_70755066_70773349_70773426_70791688_70791770_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_121208.known	chr6	-	6587	4	FSM	ENSG00000112309.11	ENST00000230053.11	6587	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	7.11805216802087	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGTACTTCTTAATTTG	-13	True	NA	NA	False	TATAAA	-15	NA	70957060	70856678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_70861750_70861829_70861979_70894127_70894273_70955838
transcript_121209.known	chr6	+	8492	7	FSM	ENSG00000119900.9	ENST00000370435.5	8492	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	15.5179107986725	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGAAGTTATTTTTATT	-1	True	NA	NA	False	AATAAA	-22	NA	71288810	71309059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_71289171_71293292_71293380_71293532_71293612_71296316_71296396_71296494_71296562_71296671_71296818_71301385
transcript_121219.known	chr6	+	1083	3	FSM	ENSG00000229852.4	ENST00000442007.1	1083	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCAGGCTTTGTAGCAT	-31	True	NA	NA	False	AAAAAG	-24	NA	73263214	73276517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73263417_73270397_73270528_73275766
transcript_121221.nnic	chr6	+	3232	3	NIC	ENSG00000229852.4	novel	2482	3	NA	NA	-6	-1295	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	4.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATTCACAAAAAAATTT	-40	True	NA	NA	False	AATAAA	-20	NA	73263205	73293423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_73263417_73270397_73270528_73290532
transcript_121223.known	chr6	+	2482	3	FSM	ENSG00000229852.4	ENST00000662430.1	2482	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCGAGACTCCGTAAAAAAA	-34	True	NA	NA	False	NA	NA	NA	73263211	73301203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73263417_73270397_73270528_73299056
transcript_121225.known	chr6	-	1430	5	FSM	ENSG00000135314.13	ENST00000370384.7	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	9.41740410091868	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	7920	False	NA	-3	True	AATAAA	-22	NA	73310215	73241313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551
transcript_121226.known	chr6	-	2053	3	FSM	ENSG00000135314.13	ENST00000484801.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTGGCTATTATTGTC	7992	False	NA	NA	False	AATAAA	-12	NA	73310143	73274138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73275557_73291997_73292041_73309551
transcript_121227.known	chr6	-	659	3	FSM	ENSG00000203909.4	ENST00000370370.4	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	7	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCAGTGTGGTTGATGG	-7	True	NA	NA	False	AATAAA	-17	NA	73354276	73353062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73353379_73353852_73354033_73354113
transcript_121228.known	chr6	+	1037	3	FSM	ENSG00000203908.4	ENST00000370367.4	1037	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGTCTGTATTTTGGAA	-1	True	NA	NA	False	AATAAA	-14	NA	73362657	73364171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73362899_73363094_73363275_73363555
transcript_121230.known	chr6	+	2430	17	FSM	ENSG00000080007.8	ENST00000370336.5	2430	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.612372435695794	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGATAATTTGTCTTT	0	True	NA	NA	False	AATAAA	-24	NA	73394827	73417566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73395156_73397688_73397745_73400233_73400364_73401858_73401991_73404689_73404772_73405678_73405836_73406363_73406483_73407504_73407616_73407959_73408102_73409247_73409349_73412204_73412293_73413657_73413786_73413969_73414080_73414547_73414687_73415496_73415585_73416112_73416252_73417186
transcript_121231.known	chr6	-	1595	6	FSM	ENSG00000164430.17	ENST00000680833.1	1595	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.68562030024339	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCACGCCTGGCTGAAAT	146	False	NA	NA	False	NA	NA	NA	73452181	73424167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73424431_73425463_73425579_73428708_73428812_73440208_73440446_73445527_73445748_73451524
transcript_121233.known	chr6	-	784	3	FSM	ENSG00000203907.10	ENST00000370359.6	784	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCCACTCATGTT	3393	False	NA	NA	False	AATAAA	-15	NA	73369897	73368554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73368864_73369205_73369386_73369602
transcript_121235.known	chr6	-	156	1	FSM	ENSG00000235174.1	ENST00000424573.1	156	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	443	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTGCACATGAGATGGC	27	False	NA	NA	False	NA	NA	NA	73373263	73373107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73373100_73373300
transcript_121236.known	chr6	+	3721	13	FSM	ENSG00000135297.17	ENST00000679418.1	3721	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	91.74553425402	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-11	True	NA	NA	False	NA	NA	NA	73461736	73502427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_121237.known	chr6	+	3629	12	FSM	ENSG00000135297.17	ENST00000681509.1	3629	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	71.3277848566881	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-17	True	NA	NA	False	NA	NA	NA	73461730	73502427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_121240.known	chr6	+	2116	11	FSM	ENSG00000135297.17	ENST00000521156.6	2116	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	73.3477334346468	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCGTGTTTTGAGAGTT	-11	True	NA	10	True	ATTAAA	-11	NA	73461736	73501092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73500573
transcript_121242.known	chr6	+	3328	11	FSM	ENSG00000135297.17	ENST00000680609.1	3328	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	75.9921706493505	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	-17	True	NA	NA	False	NA	NA	NA	73461730	73502427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_121275.known	chr6	-	1778	8	FSM	ENSG00000156508.19	ENST00000678508.1	1778	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	7809.54682110431	1260556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	6706	False	NA	-5	True	ATTAAA	-17	NA	73520214	73517514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520150
transcript_121277.known	chr6	-	3694	8	FSM	ENSG00000156508.19	ENST00000615060.5	3694	8	0	0	0	0	multi-exon	FALSE	canonical	2	218	junction_7	7746.22119329872	37346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAGCTTTAAGATGA	6329	False	NA	-21	True	AATAAA	-3	NA	73520591	73515764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520361
transcript_121278.known	chr6	-	1790	8	FSM	ENSG00000156508.19	ENST00000676710.1	1790	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	7816.01719652193	1260516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5935	False	NA	-5	True	ATTAAA	-17	NA	73520985	73517514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520909
transcript_121279.known	chr6	-	2048	8	FSM	ENSG00000156508.19	ENST00000331523.7	2048	8	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_7	7595.85713076677	1261274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5080	False	NA	-5	True	ATTAAA	-17	NA	73521840	73517514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521506
transcript_121280.known	chr6	-	1883	8	FSM	ENSG00000156508.19	ENST00000356303.7	1883	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	7818.74165459024	1260505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	5020	False	NA	-5	True	ATTAAA	-17	NA	73521900	73517514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521731
transcript_121281.known	chr6	-	1823	8	FSM	ENSG00000156508.19	ENST00000677236.1	1823	8	0	0	0	0	multi-exon	FALSE	canonical	1	220	junction_7	7745.54043120482	1234002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	12	True	NA	-9	True	ATTAAA	-13	NA	73523837	73517518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523724
transcript_121298.known	chr6	-	1731	8	FSM	ENSG00000156508.19	ENST00000678703.1	1731	8	0	0	0	0	multi-exon	FALSE	canonical	2	215	junction_6	7817.65402986166	1308839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAACCTGTGTGTTCCT	15	True	NA	-12	True	ATTAAA	-10	NA	73521032	73517521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519508_73519882_73520057_73520999
transcript_121299.known	chr6	+	2837	13	FSM	ENSG00000135297.17	ENST00000415954.6	2837	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	76.2052692112268	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGTTTTGAGAGTTAATA	9166	False	NA	14	True	ATTAAA	-15	NA	73461577	73501096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73480996_73481117_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_121300.known	chr6	-	1842	7	FSM	ENSG00000156508.19	ENST00000678515.1	1842	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2625.46944479565	1232248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	15	True	NA	-5	True	ATTAAA	-17	NA	73521032	73517514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
transcript_121301.known	chr6	-	2109	7	FSM	ENSG00000156508.19	ENST00000491404.2	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	2978.31792572027	1229023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	15	True	NA	-9	True	ATTAAA	-13	NA	73521032	73517518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73520057_73520999
transcript_121302.known	chr6	-	1825	7	FSM	ENSG00000156508.19	ENST00000488500.2	1825	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	3054.38335293176	1226186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	16	True	NA	-9	True	ATTAAA	-13	NA	73521031	73517518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73519229_73519336_73519517_73519882_73520057_73520999
transcript_121303.known	chr6	-	1849	7	FSM	ENSG00000156508.19	ENST00000495333.6	1849	7	0	0	0	0	multi-exon	FALSE	canonical	3	15498	junction_6	3055.07144851893	1224960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTGTGTGTTCCTT	15	True	NA	-11	True	ATTAAA	-11	NA	73521032	73517520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519517_73519882_73520057_73520999
transcript_121305.nnic	chr6	-	2754	12	NNC	ENSG00000119899.13	novel	3292	11	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	26.3724123324243	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGATCTGACAGTTCT	-32	True	NA	-7	True	AATAAA	-15	NA	73653998	73593378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_73593805_73594348_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_121306.known	chr6	-	3292	11	FSM	ENSG00000119899.13	ENST00000355773.6	3292	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	9.46361453145678	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGATCTGACAGTTCT	-26	True	NA	-7	True	AATAAA	-15	NA	73653992	73593378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_121316.nnic	chr6	-	1068	7	NNC	ENSG00000119899.13	novel	734	5	NA	NA	-6	12553	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	31.089476604722	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACAGGACCTTCCAAT	-32	True	NA	-10	True	AATAAA	-22	NA	73653998	73622679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_73622817_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_121324.nnic	chr6	-	871	3	Fusion	ENSG00000156508.19_ENSG00000119899.13	novel	2177	7	NA	NA	25793	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	NA	False	NA	-5	True	ATTAAA	-17	NA	73618670	73517514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_73517935_73600350_73600442_73618310
transcript_121326.nnic	chr6	-	576	3	NNC	ENSG00000119899.13	novel	3292	11	NA	NA	-6	-8859	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	45.5	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTTTATAGGAGTATTA	-32	True	NA	NA	False	ATTAAA	-20	NA	73653998	73644091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_73644265_73644406_73644604_73653792
transcript_121327.known	chr6	+	9031	33	FSM	ENSG00000156535.15	ENST00000287097.6	9031	33	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_25	5.70087712549569	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTATGTGTTCTTTTTA	24	True	NA	7	True	AATAAA	-19	NA	73696202	73828313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73696290_73697399_73697573_73723250_73723280_73730343_73730575_73736382_73736509_73756642_73756683_73758943_73759029_73762383_73762481_73762740_73762883_73763575_73763686_73765929_73766155_73766758_73766861_73766947_73767011_73768054_73768232_73771428_73771582_73780423_73780499_73781258_73781320_73782613_73782756_73783706_73783825_73785363_73785478_73787233_73787453_73788467_73788613_73792625_73792803_73803219_73803302_73806843_73807073_73808082_73808249_73809983_73810175_73810991_73811148_73812204_73812271_73814980_73815124_73818387_73818536_73820460_73820564_73823457
transcript_121345.known	chr6	-	357	3	FSM	ENSG00000112695.13	ENST00000460985.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	3235	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTCTGATTTTATCA	5	True	NA	-24	True	AATAAA	-14	NA	75243788	75237788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75240300_75240386_75243716
transcript_121347.known	chr6	-	486	4	FSM	ENSG00000112695.13	ENST00000509698.6	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3113.95464892403	22823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-8	True	NA	-22	True	AATAAA	-16	NA	75243801	75237786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75240276_75240386_75241175_75241266_75243716
transcript_121348.known	chr6	-	325	3	FSM	ENSG00000112695.13	ENST00000472311.6	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	2847	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAACTGCCACCAATAA	8	True	NA	-58	True	GATAAA	-40	NA	75243785	75237822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75241175_75241266_75243716
transcript_121349.known	chr6	-	773	4	FSM	ENSG00000112695.13	ENST00000370089.6	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	6020	junction_3	437.790665348939	25496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCAACATTATTGTGA	6303	False	NA	-13	True	ACTAAA	-5	NA	75244009	75237683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75240300_75240386_75241175_75241266_75243716
transcript_12135.known	chr1	+	1690	5	FSM	ENSG00000117592.9	ENST00000340385.6	1690	5	0	0	0	0	multi-exon	FALSE	canonical	3	4206	junction_4	178.983763230076	27119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCATATTTTGAA	-3	True	NA	49	True	AATAAA	-28	NA	173477334	173488815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173477493_173481325_173481483_173485360_173485508_173486254_173486402_173487734
transcript_121350.known	chr6	-	501	4	FSM	ENSG00000112695.13	ENST00000459637.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	2861.72818803992	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	6	True	NA	-22	True	AATAAA	-16	NA	75243787	75237786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75240300_75240386_75241122_75241266_75243716
transcript_121352.known	chr6	-	4418	7	FSM	ENSG00000112697.17	ENST00000230461.11	4418	7	0	0	0	0	multi-exon	TRUE	canonical	3	722	junction_2	72.4931031202279	1142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGTGGTGGCCTTAT	-26	True	NA	NA	False	AATAAA	-20	NA	75284792	75252923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
transcript_121356.known	chr6	-	3764	3	FSM	ENSG00000118407.15	ENST00000498523.1	3764	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	3	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAACAGAGTTTTACTT	0	True	NA	-2	True	AATAAA	-22	NA	75334790	75308087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75308898_75312396_75315203_75334642
transcript_121359.nic	chr6	-	1297	2	ISM	ENSG00000118407.15	ENST00000498523.1	3764	3	-37	6003	-37	-5999	5prime_fragment	FALSE	canonical	3	24	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAGAAGAAAAATCCTCT	NA	False	NA	NA	False	NA	NA	NA	75334827	75314090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_75315203_75334642
transcript_121360.nic	chr6	-	1119	2	ISM	ENSG00000118407.15	ENST00000498523.1	3764	3	-37	6181	-37	-6177	5prime_fragment	FALSE	canonical	3	24	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAGAAAAGTGGATGG	NA	False	NA	NA	False	AATAAA	-5	NA	75334827	75314268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_75315203_75334642
transcript_121362.known	chr6	+	1567	3	FSM	ENSG00000225793.4	ENST00000607221.3	1580	3	13	0	-13	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATGGTGCAAAAATA	17	True	NA	NA	False	AATAAA	-39	NA	75285032	75292153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75285310_75290253_75290339_75290948
transcript_121364.nnic	chr6	-	1300	2	NNC	ENSG00000118407.15	novel	3764	3	NA	NA	98	-6177	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAGAAAAGTGGATGG	98	False	NA	NA	False	AATAAA	-5	NA	75334692	75314268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_75315203_75334326
transcript_121368.known	chr6	+	6671	24	FSM	ENSG00000112701.18	ENST00000447266.7	6671	24	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	90.5783141921418	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCAAGAGTTTGGTGG	0	True	NA	NA	False	AATAAA	-21	NA	75601879	75718281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_121371.known	chr6	+	4644	23	FSM	ENSG00000112701.18	ENST00000370010.6	4644	23	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_5	97.1188247236471	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	7	True	AATAAA	-19	NA	75601508	75715904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_121376.known	chr6	+	2700	15	FSM	ENSG00000112701.18	ENST00000327284.12	2700	15	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	114.920846761622	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTATGTCTTTGTTTT	-1	True	NA	12	True	ATTAAA	-17	NA	75601926	75678975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810
transcript_121380.known	chr6	+	867	6	FSM	ENSG00000112701.18	ENST00000493959.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	167.20119616797	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATTCTAATTGTCTT	77	False	NA	NA	False	AGTAAA	-16	NA	75602223	75634811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75602577_75621531_75621626_75622750_75622859_75623899_75623961_75633580_75633727_75634706
transcript_121381.nic	chr6	+	523	5	ISM	ENSG00000112701.18	ENST00000327284.12	2700	15	533	44164	236	0	5prime_fragment	FALSE	canonical	3	349	junction_2	56.6678921436116	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAATTCTAATTGTCTT	191	False	NA	NA	False	AGTAAA	-16	NA	75602459	75634811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706
transcript_121384.known	chr6	+	3122	28	FSM	ENSG00000196586.17	ENST00000627432.3	3122	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	60.4440586407441	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAGCAAAGAGAAAACAA	-4	True	NA	0	True	NA	NA	NA	75749235	75891238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227
transcript_121387.known	chr6	+	8692	36	NNC	ENSG00000196586.17	novel	8642	36	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	82.1136295828245	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCATCTTGTGCTTTT	829	False	NA	10	True	AATAAA	-25	NA	75749191	75919537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892694_75894813_75894841_75895230_75895261_75898372_75898412_75907604_75907709_75908495_75908628_75911671_75911699_75914062_75914282_75914812
transcript_12139.nnic	chr1	+	631	3	FSM	ENSG00000289426.1	ENST00000693292.1	624	3	-2	-5	-2	5	multi-exon	FALSE	canonical	2	8	junction_2	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGGCCAATATCCCTGA	8	True	NA	NA	False	AAAAAG	-5	NA	173637710	173678269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173638035_173671233_173671335_173678063
transcript_121390.nic	chr6	+	988	9	ISM	ENSG00000196586.17	ENST00000663400.1	3140	27	2	48888	1	-45625	5prime_fragment	FALSE	canonical	3	178	junction_8	21.1863015885265	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAGAAATTATCATAT	840	False	NA	NA	False	NA	NA	NA	75749202	75841282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213
transcript_121394.known	chr6	+	627	2	FSM	ENSG00000280511.1	ENST00000626131.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	0	1700	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGACTCTCTTTTCGG	NA	False	NA	-41	True	TATAAA	-21	NA	76561327	76562590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_76561668_76562303
transcript_121396.known	chr6	-	11926	40	FSM	ENSG00000146247.14	ENST00000275034.5	11926	40	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_30	40.6106899643676	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGCTTTGCATTA	8	True	NA	0	True	AATAAA	-22	NA	79078254	78934418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78955683_78958474_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_121402.nic	chr6	-	2975	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-85	48532	-85	-42405	5prime_fragment	FALSE	canonical	3	187	junction_13	25.5477190843571	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGAAGAAAAAGATGGA	NA	False	NA	NA	False	ATTAAA	-17	NA	79078339	78982950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_12142.nnic	chr1	+	531	3	NNC	ENSG00000289426.1	novel	624	3	NA	NA	-2	24754	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_2	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCTGTGTCCATTCTTC	8	True	NA	NA	False	NA	NA	NA	173637710	173703018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_173638035_173671233_173671335_173702912
transcript_121422.known	chr6	+	5577	4	FSM	ENSG00000146243.14	ENST00000369940.7	5577	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	4.98887651569859	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGTAAGTTGGTTC	4	True	NA	17	True	AATGAA	-18	NA	78867550	78903102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_78867892_78885377_78885444_78897828_78897960_78898063
transcript_121427.nnic	chr6	+	923	4	NIC	ENSG00000146243.14	novel	5577	4	NA	NA	-37	-135	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	20.0665559243899	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAGAAGGATATTTCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	78867513	78902966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_78867892_78885377_78885444_78897828_78897960_78902618
transcript_121430.nnic	chr6	+	567	4	NNC	ENSG00000146243.14	novel	5577	4	NA	NA	222	-4928	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	12.7627931460511	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAATGGGAAGGCCAA	248	False	NA	NA	False	AAGAAA	-1	NA	78867828	78898173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_78868089_78885377_78885444_78897828_78897960_78898063
transcript_121431.nnic	chr6	+	741	4	NNC	ENSG00000146243.14	novel	5577	4	NA	NA	222	-4754	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	12.7627931460511	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTGTACTTGTATCTT	248	False	NA	NA	False	AAAAAG	-23	NA	78867828	78898347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_78868089_78885377_78885444_78897828_78897960_78898063
transcript_121434.nnic	chr6	+	1257	4	NNC	ENSG00000146243.14	novel	5577	4	NA	NA	222	-4238	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	12.7627931460511	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTCAGGTCTGATATTT	248	False	NA	NA	False	TATAAA	-19	NA	78867828	78898863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_78868089_78885377_78885444_78897828_78897960_78898063
transcript_121440.known	chr6	+	2229	2	FSM	ENSG00000286340.2	ENST00000669651.1	2229	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAAATTCATCACTTT	1408	False	NA	NA	False	TATAAA	-5	NA	79078576	79081371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_79078871_79079436
transcript_121442.known	chr6	+	2584	1	FSM	ENSG00000286340.2	ENST00000665268.1	2584	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTGGGATTTTCTGGT	672	False	NA	NA	False	AATAAA	-21	NA	79077840	79080424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_79077800_79080400
transcript_12147.nnic	chr1	+	2057	2	NNC	ENSG00000289426.1	novel	624	3	NA	NA	-2	-16429	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAAAGTGATAATTTTA	8	True	NA	NA	False	AATAAA	-4	NA	173637710	173661835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_173638035_173660102
transcript_121470.known	chr6	+	2946	2	FSM	ENSG00000270362.2	ENST00000604516.2	2965	2	19	0	19	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAGCTTGCTTGTTGGAT	13	False	NA	4	True	AATAAA	-16	NA	79233717	79236797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_79233928_79234061
transcript_121471.known	chr6	-	831	6	FSM	ENSG00000118418.14	ENST00000275036.11	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	2691	junction_1	729.049627940376	16553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-18	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_121472.known	chr6	-	872	6	FSM	ENSG00000118418.14	ENST00000344726.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	1524	junction_1	1191.48942085106	9079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-18	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_121473.known	chr6	-	1010	7	FSM	ENSG00000118418.14	ENST00000620514.1	1010	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2097.20253485976	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTGACTCTTAGTA	NA	False	NA	-10	True	AATAAA	-17	NA	79234738	79201248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79201727_79202062_79202156_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_121474.known	chr6	-	4564	8	FSM	ENSG00000135338.14	ENST00000369846.9	4564	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	4.30471976380553	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTCTTTATTTAAGT	2	True	NA	0	True	AATAAA	-14	NA	79537430	79484990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79487867_79489083_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79537164
transcript_121485.nnic	chr6	+	840	3	NNC	ENSG00000287811.2	novel	1480	2	NA	NA	-3	1964	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	7	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATTTTTTGACTGC	1	True	NA	6	True	AATACA	-17	NA	79537584	79541940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_79537885_79538727_79538844_79541516
transcript_121489.nnic	chr6	+	666	3	NNC	ENSG00000287811.2	novel	1422	2	NA	NA	-1	1964	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATTTTTTGACTGC	3	True	NA	6	True	AATACA	-17	NA	79537586	79541940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_79537713_79538727_79538844_79541516
transcript_12149.known	chr1	-	2660	6	FSM	ENSG00000183831.7	ENST00000333279.3	2660	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.6	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAATAAAAACA	1	True	NA	NA	False	NA	NA	NA	173669851	173608335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173610216_173624786_173624926_173627064_173627160_173646845_173647014_173659090_173659434_173669816
transcript_121495.known	chr6	+	4603	4	FSM	ENSG00000198478.8	ENST00000369838.6	4603	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	8.99382504215469	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTTCTGTCACCTCC	0	True	NA	20	True	AATAAA	-16	NA	79631328	79703655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_79631507_79673613_79673800_79696484_79696566_79699497
transcript_121499.known	chr6	+	2966	22	FSM	ENSG00000112742.10	ENST00000369798.7	2966	22	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_8	33.7863099380359	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	-6	True	NA	25	True	AATAAA	-30	NA	80004648	80042527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026377_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_1215.known	chr1	+	1366	6	FSM	ENSG00000041988.16	ENST00000054650.9	1361	6	-2	-3	-2	3	multi-exon	FALSE	canonical	0	0	junction_1	39.6706440582958	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTCCCATCATCATTT	-2	True	NA	17	True	AATAAA	-17	NA	6624865	6633565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6624955_6625149_6625293_6628498_6628692_6630287_6630354_6632390_6632496_6632795
transcript_12150.known	chr1	-	1824	2	FSM	ENSG00000183831.7	ENST00000367712.2	1824	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAATA	1129	False	NA	NA	False	NA	NA	NA	173669832	173657625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173659434_173669816
transcript_121500.known	chr6	+	3725	22	FSM	ENSG00000112742.10	ENST00000509894.5	3725	22	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_11	69.5809940948606	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	NA	False	NA	25	True	AATAAA	-30	NA	80003886	80042527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026380_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_121506.known	chr6	+	1514	11	FSM	ENSG00000083123.15	ENST00000356489.9	1514	11	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_10	67.1997767853436	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCAAATTGTCTTTG	8	True	NA	-13	True	AATAAA	-1	NA	80106646	80346254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663_80343813_80345974
transcript_121517.nnic	chr6	+	1754	9	NNC	ENSG00000083123.15	novel	3668	10	NA	NA	-21	-17059	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_8	177.082563723818	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCATGTTATTTAACTT	-13	True	NA	NA	False	AATAAA	-35	NA	80106625	80256131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80255396
transcript_121519.known	chr6	+	3668	10	FSM	ENSG00000083123.15	ENST00000320393.9	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	38.7817571979149	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTATGTGTTCTT	-6	True	NA	3	True	AATAAA	-17	NA	80106670	80346270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663
transcript_12152.known	chr1	+	3414	12	FSM	ENSG00000076321.11	ENST00000209884.5	3414	12	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_8	9.29587129539216	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCTAATGCTTTTTAT	28	True	NA	NA	False	AATAAA	-24	NA	173714980	173786692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173715079_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
transcript_121520.known	chr6	-	5582	3	FSM	ENSG00000112773.16	ENST00000320172.11	5582	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	-7	True	NA	-1	True	AATAAA	-22	NA	81752681	81745729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_81750472_81751589_81752179_81752430
transcript_121521.known	chr6	-	5537	3	FSM	ENSG00000112773.16	ENST00000369756.3	5537	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	10.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	449	False	NA	-1	True	AATAAA	-22	NA	81752774	81745729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_81750472_81751589_81752179_81752568
transcript_121522.known	chr6	-	5664	3	FSM	ENSG00000112773.16	ENST00000369754.7	5664	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTTGCTGTCTACAA	515	False	NA	-1	True	AATAAA	-22	NA	81752708	81745729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_81750472_81751589_81752179_81752375
transcript_121529.known	chr6	-	6040	29	FSM	ENSG00000005700.15	ENST00000306270.12	6040	29	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_23	21.51743479135	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCATTTGAAGCTTT	-6	True	NA	-8	True	AGTAAA	-18	NA	82247744	82169986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_121537.nic	chr6	-	2828	12	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-149	22971	-149	-22971	5prime_fragment	FALSE	canonical	3	69	junction_6	14.3831857756844	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGGAAGATGATCCTG	NA	False	NA	NA	False	AAAAAG	-8	NA	82247903	82214301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_121540.nnic	chr6	-	2032	11	NIC	ENSG00000005700.15	novel	4437	24	NA	NA	-31	-22971	combination_of_known_splicesites	FALSE	canonical	2	6	junction_10	28.4128492059491	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGGAAGATGATCCTG	NA	False	NA	NA	False	AAAAAG	-8	NA	82247785	82214301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82247561
transcript_121541.nic	chr6	-	1230	2	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-23	48499	-23	-48499	5prime_fragment	FALSE	canonical	3	101	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCACAATTTATTTGCA	NA	False	NA	NA	False	ATTAAA	-19	NA	82247777	82239829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_82240844_82247561
transcript_121542.nic	chr6	-	406	2	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-23	49323	-23	-49323	5prime_fragment	FALSE	canonical	3	101	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTATAAAGATATATAGTT	NA	False	NA	NA	False	NA	NA	NA	82247777	82240653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_82240844_82247561
transcript_121550.known	chr6	-	1925	10	FSM	ENSG00000118420.17	ENST00000369747.8	1925	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	13.0563829525052	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTTCTATTCTTTG	-33	True	NA	-17	True	AATAAA	-24	NA	83065841	82892389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_121560.nic	chr6	-	791	4	ISM	ENSG00000118420.17	ENST00000509102.5	1246	10	-116	151430	-26	-8357	5prime_fragment	FALSE	canonical	3	95	junction_1	11.0855260988773	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGACTTCTTCAATCT	NA	False	NA	-1	True	AATAAA	-23	NA	83065867	83044382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_83044660_83054147_83054239_83057825_83058023_83065641
transcript_121563.known	chr6	-	3255	6	FSM	ENSG00000118420.17	ENST00000505226.1	3255	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	45.9190592238125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGTACAAAAAAAT	-15	True	NA	NA	False	NA	NA	NA	83065823	83036025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83063152_83063246_83065641
transcript_121568.known	chr6	-	2013	14	FSM	ENSG00000013375.16	ENST00000512866.5	2013	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	116.199125153292	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCATTTTCTCTATTCTA	19	True	NA	-5	True	AATAAA	-19	NA	83193231	83166129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83166467_83169241_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_121572.known	chr6	-	6079	13	FSM	ENSG00000013375.16	ENST00000513973.6	6079	13	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_7	30.6508111185042	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTCCTTTGACTTCA	-15	True	NA	3	True	AATAAA	-21	NA	83193265	83164872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_121577.known	chr6	-	1952	13	FSM	ENSG00000013375.16	ENST00000509219.2	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	119.298179179548	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTTCCGTTTA	-18	True	NA	2	True	ATTAAA	-22	NA	83193268	83169520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169842_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_121578.known	chr6	-	1866	12	FSM	ENSG00000013375.16	ENST00000651425.1	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	123.583477993856	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATCTTTGCCATCACC	695	False	NA	-5	True	ATTAAA	-19	NA	83193288	83168902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83193178
transcript_121580.known	chr6	-	2996	12	FSM	ENSG00000013375.16	ENST00000650640.1	2996	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	132.716002012126	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAACTTTGGCAATTG	-11	True	NA	NA	False	ATTAAA	-3	NA	83193261	83167793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_121584.known	chr6	-	1893	12	FSM	ENSG00000013375.16	ENST00000650642.1	1893	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	125.272991159506	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATCTTATTACCAAC	-7	True	NA	-30	True	NA	NA	NA	83193257	83168927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_121598.known	chr6	-	561	5	FSM	ENSG00000013375.16	ENST00000505470.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	193.281368734806	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACATGGTGTATTGTCG	-5	True	NA	NA	False	NA	NA	NA	83193255	83182949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83182979_83187007_83187076_83188613_83188795_83190808_83191015_83193178
transcript_121599.nnic	chr6	+	1488	4	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	-40	-2398	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	24.7296493213219	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	NA	False	NA	7	True	AATAAA	-15	NA	83193316	83196537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_83193444_83194311_83194653_83195194_83195272_83195594
transcript_121605.known	chr6	+	3769	3	FSM	ENSG00000013392.8	ENST00000369724.5	3769	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTTTTCATTCC	-12	True	NA	NA	False	AGTAAA	-20	NA	83193356	83198935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83193444_83194311_83194653_83195594
transcript_121607.nnic	chr6	+	1163	3	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	-11	-2398	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	23.5	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	-23	True	NA	7	True	AATAAA	-15	NA	83193345	83196537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_83193444_83194530_83194653_83195594
transcript_121612.known	chr6	-	2325	11	FSM	ENSG00000013375.16	ENST00000616566.5	2325	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	166.777366569928	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTACATACAAAAAAGGAA	16	True	NA	-34	True	ATTAAA	-20	NA	83193234	83168266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83193178
transcript_121613.known	chr6	-	640	4	FSM	ENSG00000013375.16	ENST00000508748.5	640	4	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_3	218.970825048047	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGATGATAAGAGTTAC	690	False	NA	NA	False	NA	NA	NA	83193293	83188616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83188799_83190808_83191015_83191186_83191324_83193178
transcript_121615.known	chr6	+	2444	2	FSM	ENSG00000146250.7	ENST00000369700.4	2444	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTCTGGTTATTTTCC	9	True	NA	10	True	AATAAA	-22	NA	83512533	83525704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83512695_83523421
transcript_121616.known	chr6	+	664	4	FSM	ENSG00000203877.9	ENST00000369689.6	570	4	-94	0	-94	0	multi-exon	FALSE	canonical	2	4	junction_1	5.55777733351102	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	36	False	NA	NA	False	AATAAA	-17	NA	83853265	83857515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83853512_83853694_83853774_83854096_83854162_83857241
transcript_121617.known	chr6	+	521	3	FSM	ENSG00000203877.9	ENST00000369687.2	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	-15	True	NA	NA	False	AATAAA	-17	NA	83853591	83857515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83853774_83854096_83854162_83857241
transcript_121620.known	chr6	+	9205	16	FSM	ENSG00000065615.14	ENST00000369681.10	9205	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_12	16.7052885837589	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTCTGTATTTT	5	True	NA	12	True	AATAAA	-15	NA	83859688	83967423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514_83940602_83955297_83955463_83959823
transcript_121627.nic	chr6	+	2562	14	ISM	ENSG00000065615.14	ENST00000369681.10	9205	16	-43	25743	-10	-13695	5prime_fragment	FALSE	canonical	3	102	junction_12	14.7491851143872	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGACACCTGAATTTATT	-38	True	NA	NA	False	AATAAA	-17	NA	83859645	83941680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514
transcript_121636.nnic	chr6	+	2191	4	NNC	ENSG00000135324.6	novel	2137	4	NA	NA	-567	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	28.0832096931007	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	NA	False	NA	15	True	AATAAA	-15	NA	84033204	84090881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_84033371_84055311_84055446_84062892_84062993_84089090
transcript_121637.nnic	chr6	+	2142	4	NNC	ENSG00000135324.6	novel	2137	4	NA	NA	-296	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.4010233745876	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	NA	False	NA	15	True	AATAAA	-15	NA	84033475	84090881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_84033593_84055311_84055446_84062892_84062993_84089090
transcript_121639.known	chr6	+	2137	4	FSM	ENSG00000135324.6	ENST00000257776.5	2137	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	5.90668171555645	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	24	True	NA	15	True	AATAAA	-15	NA	84033771	84090881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_84033884_84055311_84055446_84062892_84062993_84089090
transcript_121647.known	chr6	-	5155	27	FSM	ENSG00000135315.12	ENST00000403245.8	5155	27	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_14	15.7924781736086	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTATATAATGATTT	-15	True	NA	-12	True	AATAAA	-17	NA	84227643	84124249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_84125277_84126377_84126513_84146686_84146786_84149561_84149704_84152544_84153180_84155297_84155511_84160811_84160917_84161745_84161910_84163143_84163271_84169327_84169434_84171605_84171719_84174047_84174189_84174726_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_121656.nic	chr6	-	2078	15	ISM	ENSG00000135315.12	ENST00000403245.8	5155	27	-27	50574	-27	-52	5prime_fragment	FALSE	canonical	3	34	junction_2	6.6332495807108	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAGAACTAGAAAATA	NA	False	NA	NA	False	ATTAAA	-18	NA	84227670	84174823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_121664.known	chr6	-	2072	15	FSM	ENSG00000135315.12	ENST00000497936.5	2072	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.9331089117215	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTCTTCAAATTGAATCA	20	True	NA	NA	False	ACTAAA	-17	NA	84227608	84174771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_84174955_84175209_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_121666.known	chr6	+	3562	9	FSM	ENSG00000135318.12	ENST00000257770.8	3562	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	1.79843682124227	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCTTTGATAGTTATT	8	True	NA	9	True	AATAAA	-16	NA	85450082	85495784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_85450479_85467059_85467283_85471236_85471426_85485234_85485433_85487334_85487490_85489493_85489600_85490507_85490658_85491976_85492178_85493840
transcript_121667.known	chr6	+	974	3	FSM	ENSG00000135318.12	ENST00000369646.7	974	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTACTAAGAATTTATTGA	16	True	NA	NA	False	ATTAAA	-26	NA	85450090	85471599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_85450479_85467059_85467283_85471236
transcript_121668.known	chr6	-	5794	44	FSM	ENSG00000271793.2	ENST00000682106.1	5794	44	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	716.006206710244	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-3	True	NA	NA	False	TATAAA	-1	NA	85678733	85505527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526226_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572188_85572297_85572375_85574257_85574379_85612831_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85663673_85663727_85666003_85666148_85677423_85677493_85677953_85678033_85678135
transcript_12167.known	chr1	+	450	4	FSM	ENSG00000076321.11	ENST00000479505.5	450	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	40.2022663816634	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAAGCACCCTCGACAA	-12	True	NA	NA	False	NA	NA	NA	173714940	173733828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173715079_173715522_173715655_173716002_173716067_173733712
transcript_121670.known	chr6	-	3452	29	FSM	ENSG00000135317.14	ENST00000314673.8	3452	29	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_14	42.1632365978724	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	0	True	NA	NA	False	AATAAA	-29	NA	85593858	85505495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_121677.known	chr6	-	3111	28	FSM	ENSG00000135317.14	ENST00000369627.6	3111	28	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	39.8304362119475	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGAGTCTCATAGTCT	8	True	NA	-19	True	AATAAA	-27	NA	85593850	85505801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_121679.known	chr6	-	3856	27	FSM	ENSG00000135317.14	ENST00000683458.1	3856	27	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_17	70.0203689722206	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-39	True	NA	NA	False	NA	NA	NA	85593897	85504994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547115_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_121683.known	chr6	-	3348	26	FSM	ENSG00000135317.14	ENST00000346348.7	3348	26	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_22	54.4621116006348	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	8153	False	NA	NA	False	AATAAA	-29	NA	85593913	85505495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_121687.known	chr6	-	2380	2	FSM	ENSG00000135317.14	ENST00000684183.1	2380	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATCTCAAAAAAAAAAAAAA	-19	True	NA	NA	False	NA	NA	NA	85593877	85589252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85591334_85593578
transcript_121690.known	chr6	-	2158	12	FSM	ENSG00000135316.19	ENST00000676542.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	330.97646666735	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTAGATTTTTCCCCT	-25	True	NA	-3	True	AATAAA	-26	NA	85642978	85612568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85615018_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_121691.known	chr6	-	1804	12	FSM	ENSG00000135316.19	ENST00000444272.2	1804	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	346.970096598949	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAAATCAAGCAACCT	2035	False	NA	NA	False	NA	NA	NA	85642042	85612831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85641989
transcript_121692.known	chr6	-	6427	12	FSM	ENSG00000135316.19	ENST00000678878.1	6427	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	296.748857280901	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-25	True	NA	-27	True	AATAAA	-17	NA	85642978	85608334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_121693.known	chr6	-	6336	12	FSM	ENSG00000135316.19	ENST00000677771.1	6336	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	386.788707348381	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	6	True	NA	-27	True	AATAAA	-17	NA	85643840	85608334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_121703.known	chr6	-	2754	11	FSM	ENSG00000135316.19	ENST00000369622.8	2754	11	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_10	100.097152806661	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTGGTAAGTATTT	7	True	NA	NA	False	AATAAA	-20	NA	85642886	85613975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_121704.known	chr6	-	2552	11	FSM	ENSG00000135316.19	ENST00000676688.1	2552	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	299.907652453218	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-21	True	NA	54	True	AATAAA	-28	NA	85643867	85614205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_121708.known	chr6	-	3098	10	FSM	ENSG00000135316.19	ENST00000678618.1	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	345.385274229115	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAGGCGAGTGTAAC	29	True	NA	-22	True	AATAAA	-16	NA	85642924	85611321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_121712.nic	chr6	-	1783	10	ISM	ENSG00000135316.19	ENST00000369622.8	2754	11	-444	4885	-319	-4133	5prime_fragment	FALSE	canonical	3	883	junction_9	100.81458350315	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAAAAGCTCAG	-21	True	NA	7	True	NA	NA	NA	85643330	85618860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_121719.known	chr6	-	6770	11	FSM	ENSG00000135316.19	ENST00000616122.5	6770	11	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_10	309.576161872971	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTACAGCTTCCT	1155	False	NA	-1	True	AATAAA	-21	NA	85642922	85607778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_121720.known	chr6	-	3310	10	FSM	ENSG00000135316.19	ENST00000678899.1	3310	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_9	300.956417828394	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACTTGAAAGACAAAC	1066	False	NA	-16	True	AATAAA	-17	NA	85643011	85613384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_121721.known	chr6	-	2421	10	FSM	ENSG00000135316.19	ENST00000677514.1	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	429.089245084182	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-16	True	NA	54	True	AATAAA	-28	NA	85642969	85614205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637268_85637357_85640220_85640329_85640445_85640565_85642796
transcript_121723.known	chr6	-	738	6	FSM	ENSG00000203875.13	ENST00000669824.1	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	1548.39767501763	10044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678402
transcript_121725.known	chr6	-	638	6	FSM	ENSG00000203875.13	ENST00000667622.1	638	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1553.47216260865	3071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTATGTTCCTTTTTG	509	False	NA	-20	True	AATAAA	-11	NA	85678748	85677086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678497
transcript_121728.known	chr6	-	401	4	FSM	ENSG00000203875.13	ENST00000453754.5	401	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	1534.6813639609	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGTTCCTTTTTGTTA	684	False	NA	-17	True	AATAAA	-14	NA	85678573	85677083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678402
transcript_121729.known	chr6	-	1000	2	FSM	ENSG00000203875.13	ENST00000587692.6	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTCCATTGTATTATT	509	False	NA	1	True	ATTAAA	-25	NA	85678748	85665760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85666148_85678135
transcript_12173.known	chr1	+	3336	17	FSM	ENSG00000117593.12	ENST00000649689.2	3336	17	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	27.973131640022	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTTTTTTTTTAG	7	True	NA	25	True	ATTAAA	-41	NA	173824672	173858546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_121730.known	chr6	-	1323	8	FSM	ENSG00000203875.13	ENST00000656441.1	1323	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1878.65558746848	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGCAAGGAACTGAGCCAG	509	False	NA	NA	False	AGTAAA	-18	NA	85678748	85660942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85661135_85663673_85663727_85666003_85666148_85677092_85677192_85677423_85677493_85677794_85677869_85677953_85678033_85678135
transcript_121731.known	chr6	-	451	6	FSM	ENSG00000203875.13	ENST00000414002.6	451	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1517.40823775278	7954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677790_85677876_85677953_85678033_85678135_85678189_85678693
transcript_121732.known	chr6	-	866	4	FSM	ENSG00000203875.13	ENST00000428833.6	866	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2014.57296274477	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	509	False	NA	-18	True	AATAAA	-13	NA	85678748	85677084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677186_85677419_85677493_85677953_85678033_85678135
transcript_121733.known	chr6	-	2052	5	FSM	ENSG00000203875.13	ENST00000661011.1	2052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1731.77529936767	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTATGCAGATATAAAT	509	False	NA	-58	True	NA	NA	NA	85678748	85664937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85666148_85677423_85677493_85677794_85677876_85677953_85678033_85678135
transcript_121734.known	chr6	-	772	7	FSM	ENSG00000203875.13	ENST00000671650.1	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1449.97674310851	9475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACAGGGTCAACTGTACA	509	False	NA	-50	True	NA	NA	NA	85678748	85665811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85666148_85677092_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
transcript_121735.known	chr6	-	703	6	FSM	ENSG00000203875.13	ENST00000669160.1	703	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1579.29166400637	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTCAGTCTTGTCCAT	-6	True	NA	-8	True	ATTAAA	-16	NA	85678736	85665769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85666148_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
transcript_121736.known	chr6	-	1022	3	FSM	ENSG00000203875.13	ENST00000669413.1	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_2	539.5	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	509	False	NA	3	True	ATTAAA	-33	NA	85678748	85676989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85678189_85678693
transcript_121737.known	chr6	-	1208	3	FSM	ENSG00000203875.13	ENST00000662914.1	1208	3	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	256.5	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTTGTAATCAAATTA	509	False	NA	-14	True	ATTAAA	-16	NA	85678748	85677006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794
transcript_121738.known	chr6	-	934	5	FSM	ENSG00000203875.13	ENST00000369605.9	934	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1731.77529936767	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-2	True	NA	-15	True	AATAAA	-16	NA	85678732	85677081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677186_85677419_85677493_85677794_85677876_85677953_85678033_85678135
transcript_121739.known	chr6	-	456	6	FSM	ENSG00000203875.13	ENST00000623001.4	456	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1532.99140245469	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	-6	True	NA	-18	True	AATAAA	-13	NA	85678736	85677084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677900_85677953_85678033_85678135_85678189_85678693
transcript_121740.known	chr6	-	1008	4	FSM	ENSG00000203875.13	ENST00000670327.1	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1835.85021175476	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATTTTGGATTATGT	-6	True	NA	13	True	AATAAA	-2	NA	85678736	85677095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677790_85678033_85678135
transcript_121741.known	chr6	-	823	4	FSM	ENSG00000203875.13	ENST00000427501.6	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	1812.04788997299	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85678033_85678135_85678189_85678697
transcript_121742.known	chr6	-	553	5	FSM	ENSG00000203875.13	ENST00000667545.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	640.332921221453	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678189_85678693
transcript_121743.known	chr6	-	600	5	FSM	ENSG00000203875.13	ENST00000664198.1	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	791.364802098248	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTTGTAATCAAATTA	509	False	NA	-14	True	ATTAAA	-16	NA	85678748	85677006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85678033_85678135_85678189_85678693
transcript_121744.known	chr6	-	790	3	FSM	ENSG00000203875.13	ENST00000435947.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	509	False	NA	-15	True	AATAAA	-16	NA	85678748	85677081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677186_85677419_85677493_85678135
transcript_121745.known	chr6	-	1258	4	FSM	ENSG00000203875.13	ENST00000657398.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	437.256090739613	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTTTTGTTATTACTT	509	False	NA	-11	True	AATAAA	-20	NA	85678748	85677077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135
transcript_121746.known	chr6	-	279	4	FSM	ENSG00000203875.13	ENST00000660949.1	279	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	1518.52040559955	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATGTTCCTTTTTGT	509	False	NA	-19	True	AATAAA	-12	NA	85678748	85677085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678697
transcript_121747.known	chr6	-	1345	3	FSM	ENSG00000203875.13	ENST00000670410.1	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_1	232	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-6	True	NA	-15	True	AATAAA	-16	NA	85678736	85677081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677876_85677953
transcript_121748.known	chr6	-	750	5	FSM	ENSG00000203875.13	ENST00000668512.1	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_4	785.630121303912	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTTTTTGTTATTA	509	False	NA	-14	True	AATAAA	-17	NA	85678748	85677080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135_85678189_85678693
transcript_121749.known	chr6	-	1278	3	FSM	ENSG00000203875.13	ENST00000655881.1	1278	3	0	0	0	0	multi-exon	FALSE	canonical	3	3744	junction_2	24.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-6	True	NA	-12	True	AATAAA	-19	NA	85678736	85677078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677493_85677794_85677876_85677953
transcript_121750.known	chr6	-	1187	4	FSM	ENSG00000203875.13	ENST00000661360.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	3744	junction_2	273.910366523228	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677493_85677794_85677876_85677953_85678033_85678135
transcript_121751.known	chr6	-	967	4	FSM	ENSG00000203875.13	ENST00000658871.1	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_3	904.020280008511	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGTTCCTTTTTGTTA	-6	True	NA	-17	True	AATAAA	-14	NA	85678736	85677083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677876_85677953_85678033_85678135_85678189_85678693
transcript_121752.known	chr6	-	438	5	FSM	ENSG00000203875.13	ENST00000433843.2	438	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	1696.18115188207	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTACGGATCTGGCTTCT	509	False	NA	NA	False	NA	NA	NA	85678748	85677318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678697
transcript_121753.known	chr6	-	1489	3	FSM	ENSG00000203875.13	ENST00000659484.1	1489	3	0	0	0	0	multi-exon	FALSE	canonical	3	3744	junction_1	302	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677876_85677953_85678033_85678135
transcript_121754.known	chr6	-	1265	3	FSM	ENSG00000203875.13	ENST00000660580.1	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	3793	junction_1	277.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	509	False	NA	-12	True	AATAAA	-19	NA	85678748	85677078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677493_85677794_85678033_85678135
transcript_121763.nnic	chr6	+	1322	4	Antisense	novelGene_ENSG00000218561.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAACAACCCCATCAAAAT	218	False	NA	NA	False	AAGAAA	-4	NA	86601635	86730899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_86601936_86724417_86724486_86724812_86724981_86730113
transcript_121769.known	chr6	-	710	4	FSM	ENSG00000135346.9	ENST00000627148.3	710	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGAATTATCATTTTTC	-2	True	NA	NA	False	AATAAA	-22	NA	87095106	87085497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_87085834_87086249_87086435_87088112_87088208_87095012
transcript_12177.known	chr1	+	3057	16	FSM	ENSG00000117593.12	ENST00000648807.1	3057	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	66.3821930607565	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	-13	True	NA	-12	True	GATAAA	-5	NA	173824652	173858400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_121770.known	chr6	+	12341	8	FSM	ENSG00000188994.13	ENST00000369577.8	12341	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	18.1186565254081	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGCCTTTAAACATTC	-4	True	NA	25	True	ATTAAA	-33	NA	87155564	87265943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87243474_87243612_87245502_87245645_87254649
transcript_121774.known	chr6	+	1732	5	FSM	ENSG00000188994.13	ENST00000369578.6	1732	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	44.6878059430087	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATGTCTCCAAGTCTAA	-4	True	NA	NA	False	ATTAAA	-17	NA	87155564	87223936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87222769
transcript_121775.nic	chr6	+	1828	5	ISM	ENSG00000188994.13	ENST00000369577.8	12341	8	-14	31370	-14	-8994	5prime_fragment	FALSE	canonical	3	85	junction_4	10.816653826392	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAACCTA	-18	True	NA	NA	False	NA	NA	NA	87155550	87234573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324
transcript_121776.nic	chr6	+	609	4	ISM	ENSG00000188994.13	ENST00000369578.6	1732	5	-14	5175	-14	-4106	5prime_fragment	FALSE	canonical	3	103	junction_3	5.24933858267454	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATTAGACTAGAAAAAA	-18	True	NA	NA	False	GATAAA	-32	NA	87155550	87218761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595
transcript_121790.known	chr6	+	2405	3	FSM	ENSG00000111850.11	ENST00000229570.9	2405	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	9.5	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAAGATTCTGAACATT	-8	True	NA	10	True	AATAAA	-15	NA	87322592	87342322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87322633_87337008_87337167_87340115
transcript_121797.known	chr6	-	2279	3	FSM	ENSG00000164411.12	ENST00000525899.6	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGCTGTCATTGGTA	0	True	NA	NA	False	AATAAA	-21	NA	87329278	87282979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_87284940_87322865_87323044_87329137
transcript_121800.nic	chr6	+	381	2	ISM	ENSG00000111850.11	ENST00000608525.5	735	3	-47	4460	-21	-3186	5prime_fragment	FALSE	canonical	3	244	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTTTCACATATAAATA	NA	False	NA	NA	False	AATAAA	-25	NA	87322561	87337318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_87322633_87337008
transcript_121801.known	chr6	+	735	3	FSM	ENSG00000111850.11	ENST00000608525.5	735	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	121.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTATAATGTACTTCATA	8	True	NA	30	True	AATAAA	-42	NA	87322608	87341778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87322633_87337008_87337167_87341225
transcript_121803.known	chr6	+	2207	13	FSM	ENSG00000272514.6	ENST00000369562.9	2207	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTAGAAAAATTTGTCA	-28	True	NA	NA	False	AATAAA	-20	NA	87407971	87464465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87408090_87409834_87409948_87410584_87410669_87413809_87413901_87415685_87415875_87416668_87416828_87418207_87418417_87426525_87426646_87428625_87428825_87431032_87431174_87434859_87435054_87461021_87461166_87464019
transcript_121808.nnic	chr6	+	1734	8	NNC	ENSG00000164414.19	novel	1854	8	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_6	24.5223762872914	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	87472963	87512336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508467_87509040_87509176_87511398
transcript_121809.known	chr6	+	1854	8	FSM	ENSG00000164414.19	ENST00000369552.9	1854	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.1024909872717	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	-10	True	NA	NA	False	AATAAA	-17	NA	87472973	87512336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508597_87509040_87509176_87511398
transcript_12181.known	chr1	+	1793	14	FSM	ENSG00000117593.12	ENST00000648458.1	1793	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	68.9648740023053	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATGCTGGTGTTTCAT	-10	True	NA	NA	False	ATTAAA	-19	NA	173824959	173852014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173851835
transcript_12182.known	chr1	+	3025	14	FSM	ENSG00000117593.12	ENST00000650297.1	3025	14	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	24.756805292364	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTACCCTGCTTAAAAA	27	False	NA	NA	False	NA	NA	NA	173824846	173854646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348
transcript_12183.known	chr1	+	2716	14	FSM	ENSG00000117593.12	ENST00000648960.1	2716	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	73.983845989889	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAAAGTGAATAAAAGTA	-13	True	NA	-23	True	NA	NA	NA	173824652	173858389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173856665_173856742_173857517
transcript_121830.nnic	chr6	-	2020	20	ISM	ENSG00000146282.19	ENST00000693431.1	2361	21	-1	461	-1	4	5prime_fragment	FALSE	canonical	3	257	junction_19	117.637642608345	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	NA	False	NA	-47	True	AATGAA	-41	NA	87590013	87514406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_121832.known	chr6	-	2242	20	FSM	ENSG00000146282.19	ENST00000369536.10	2242	20	0	0	0	0	multi-exon	TRUE	canonical	3	480	junction_19	80.3308946270297	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-8	True	NA	-13	True	AATAAA	-14	NA	87589987	87513937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
transcript_121883.nnic	chr6	+	2631	21	NIC	ENSG00000135336.16	novel	2501	20	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	213.6	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	NA	False	NA	16	True	AATAAA	-23	NA	87590091	87667451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_121884.nnic	chr6	+	2628	21	NIC	ENSG00000135336.16	novel	2498	20	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	207.619363258825	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	NA	False	NA	16	True	AATAAA	-23	NA	87590091	87667451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_121887.known	chr6	+	2501	20	FSM	ENSG00000135336.16	ENST00000257789.4	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_14	144.243599741833	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-8	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_121890.known	chr6	+	2498	20	FSM	ENSG00000135336.16	ENST00000392844.8	2498	20	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_14	132.734337803497	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	-8	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_1219.nnic	chr1	-	845	6	NNC	ENSG00000007923.17	novel	3555	15	NA	NA	48	-240	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	343.232282863952	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCTCGTGGTCACATGC	NA	False	NA	NA	False	ATTAAA	-17	NA	6701876	6653153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_6653416_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_121917.known	chr6	+	471	4	FSM	ENSG00000135336.16	ENST00000468486.2	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	438.877608856451	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACCACCTTGGCCTTA	-13	True	NA	21	True	AATAAA	-17	NA	87590129	87595437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87590193_87594352_87594408_87594526_87594614_87595171
transcript_121921.nic	chr6	+	744	4	ISM	ENSG00000135336.16	ENST00000681069.1	2035	15	-44	53515	25	-5658	5prime_fragment	FALSE	canonical	3	707	junction_3	150.564124397399	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGTTTTCATACTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	87590091	87603873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383
transcript_121927.known	chr6	-	1898	5	FSM	ENSG00000135334.9	ENST00000257787.6	1898	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	18.9538914210249	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCCAGGAATCAGTG	24	True	NA	-12	True	AATAAA	-21	NA	87702233	87674859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_87675608_87675859_87675932_87677817_87677968_87681619_87681764_87701449
transcript_121931.known	chr6	-	4825	16	FSM	ENSG00000111880.16	ENST00000369485.9	4825	16	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_4	23.8523234367919	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTCGTGAACTACCAAA	-13	True	NA	NA	False	AATAAA	-14	NA	88963618	88609896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_121935.known	chr6	-	1725	15	FSM	ENSG00000111880.16	ENST00000369475.7	1725	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.6684280599498	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGCCTGTGACTTGAGG	196	False	NA	NA	False	NA	NA	NA	88963409	88612718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_121937.known	chr6	-	2017	14	FSM	ENSG00000111880.16	ENST00000627296.1	2017	14	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	25.2977534844687	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGAAT	44	False	NA	NA	False	NA	NA	NA	88963561	88677993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_121945.nic	chr6	-	747	5	ISM	ENSG00000111880.16	ENST00000538899.2	1374	12	-236	136527	-27	-136527	5prime_fragment	FALSE	canonical	3	243	junction_1	9.28372231381357	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTGTATTGTCAAGTT	NA	False	NA	NA	False	AATAAA	-26	NA	88963645	88906296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_121947.nic	chr6	-	479	3	ISM	ENSG00000111880.16	ENST00000538899.2	1374	12	-236	159429	-27	-159429	5prime_fragment	FALSE	canonical	3	249	junction_1	9.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAATCAAATATATAAA	NA	False	NA	NA	False	NA	NA	NA	88963645	88929198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_88929268_88941070_88941181_88963345
transcript_12195.known	chr1	-	688	12	FSM	ENSG00000234741.9	ENST00000454068.5	688	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	855.359815062141	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATCCATCTGGAGTGT	172	False	NA	-22	True	AATAAA	-4	NA	173867815	173863910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867721
transcript_121950.nnic	chr6	+	1330	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-138	-322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	918	False	NA	20	True	TTTAAA	-31	NA	89081697	89084838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_89081757_89082550_89082736_89083752
transcript_121952.nnic	chr6	+	1677	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-71	-322	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	985	False	NA	20	True	TTTAAA	-31	NA	89081764	89084838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_89082166_89082545_89082736_89083752
transcript_121956.known	chr6	+	816	2	FSM	ENSG00000146278.11	ENST00000369472.1	816	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATATTTTGTAAATA	0	True	NA	NA	False	TTTAAA	-27	NA	89080750	89084345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_89080974_89083752
transcript_121957.nnic	chr6	+	1454	2	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-38	-322	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	-17	True	NA	20	True	TTTAAA	-31	NA	89081797	89084838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_89082166_89083752
transcript_121961.known	chr6	-	3589	5	FSM	ENSG00000154548.9	ENST00000452027.3	3589	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	65.3490627323759	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTGTGATCAGTTCTT	-28	True	NA	-9	True	AATAAA	-19	NA	89118071	89095958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89098948_89105118_89105261_89105426_89105531_89107153_89107259_89117822
transcript_121966.known	chr6	-	4164	8	FSM	ENSG00000198833.7	ENST00000435041.3	4164	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	27.1263107460981	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTTTGACCAAAGGT	2	True	NA	-4	True	AATAAA	-20	NA	89352722	89326624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89329958_89333085_89333206_89335301_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
transcript_12197.known	chr1	-	1007	12	FSM	ENSG00000234741.9	ENST00000451607.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	928.299013169377	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTACAGCCTCAAACTTC	258	False	NA	NA	False	NA	NA	NA	173867729	173864033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867154
transcript_121971.nnic	chr6	-	1354	8	NNC	ENSG00000025039.15	novel	4923	7	NA	NA	-10	-2872	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	58.6341127985533	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATATTAACAGTGATG	-3	True	NA	-25	True	AATAAA	-22	NA	89412080	89367869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387397_89387518_89387591_89411845
transcript_121974.nic	chr6	-	1523	7	NIC	ENSG00000025039.15	novel	4923	7	NA	NA	-110	-2872	combination_of_known_junctions	FALSE	canonical	1	5	junction_6	60.7307353999787	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATATTAACAGTGATG	647	False	NA	-25	True	AATAAA	-22	NA	89411615	89367869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411333
transcript_121975.known	chr6	-	4923	7	FSM	ENSG00000025039.15	ENST00000369415.9	4923	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	16.6499916583229	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTCTTACATCTCCACAT	-11	True	NA	19	True	GATAAA	-39	NA	89412273	89364615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411845
transcript_121980.nnic	chr6	-	1096	5	NIC	ENSG00000025039.15	novel	4923	7	NA	NA	55	-2872	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	69.1750496927903	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATATTAACAGTGATG	247	False	NA	-25	True	AATAAA	-22	NA	89412015	89367869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_89368208_89372436_89372586_89377670_89377814_89387294_89387591_89411845
transcript_121986.known	chr6	-	608	3	FSM	ENSG00000083099.11	ENST00000523075.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	128	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTAACAAATGGCCAGTA	311	False	NA	17	True	AAGAAA	-5	NA	89638432	89637047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89637354_89637741_89637883_89638271
transcript_121987.known	chr6	-	565	3	FSM	ENSG00000083099.11	ENST00000521961.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	15	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGGACACAATCATTAG	-8	True	NA	38	True	AAGAAA	-26	NA	89638483	89637026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89637354_89637724_89637883_89638403
transcript_121988.known	chr6	-	677	3	FSM	ENSG00000083099.11	ENST00000520318.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	123	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGAGTTCAAGACCAG	-6	True	NA	NA	False	NA	NA	NA	89638749	89636912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89637354_89637724_89637883_89638671
transcript_121997.known	chr6	-	791	3	FSM	ENSG00000083099.11	ENST00000520441.5	791	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAGCATTTACTCTG	9	True	NA	NA	False	NA	NA	NA	89638734	89621378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89621949_89637724_89637883_89638671
transcript_122002.nic	chr6	-	2468	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-126	137304	-55	-31593	5prime_fragment	FALSE	canonical	3	14	junction_4	8.44736791499921	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAC	9766	False	NA	NA	False	ACTAAA	-13	NA	89819849	89780815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_122004.nic	chr6	-	1852	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-126	137920	-55	-32209	5prime_fragment	FALSE	canonical	3	14	junction_4	8.44736791499921	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACCCTTGAGGGAAGAG	9766	False	NA	NA	False	AAAACA	-5	NA	89819849	89781431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_122008.known	chr6	-	18485	102	FSM	ENSG00000112159.12	ENST00000369393.8	18485	102	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_96	128.029459101428	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCATCCCACTCAC	-40	True	NA	-9	True	TATAAA	-24	NA	89819794	89642497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89644194_89645014_89645158_89646539_89646604_89648031_89648147_89648255_89648330_89650023_89650199_89650731_89650848_89652191_89652282_89652991_89653156_89654163_89654335_89655763_89655969_89656699_89656802_89658208_89658371_89658609_89658918_89661430_89661579_89662086_89662240_89662791_89662968_89664486_89664629_89668013_89668152_89670918_89671081_89672199_89672364_89672546_89672703_89673235_89673463_89674103_89674590_89675463_89675580_89676101_89676208_89677569_89677697_89678598_89678746_89680588_89680752_89683131_89683331_89683830_89683905_89684875_89684986_89685826_89685974_89686901_89687024_89687343_89687439_89688077_89688174_89688572_89688809_89689869_89690144_89690672_89690835_89692442_89693149_89694073_89694184_89695604_89695993_89696359_89696575_89698864_89699036_89699600_89699728_89700062_89700295_89700645_89700857_89701557_89701679_89701903_89702062_89706058_89706193_89707360_89707477_89708495_89708629_89710680_89710795_89712035_89712257_89712574_89712787_89713147_89713297_89714542_89714752_89715652_89715770_89716649_89716810_89718365_89718628_89718766_89719031_89719135_89719226_89722954_89723144_89723511_89723620_89725198_89725397_89727832_89727956_89728930_89729140_89730725_89730924_89732556_89732776_89738325_89738456_89740233_89740379_89743149_89743281_89743575_89743715_89745272_89745412_89745491_89745627_89747328_89747471_89749222_89749370_89749542_89749752_89750353_89750533_89751430_89751583_89753511_89753623_89754082_89754231_89756276_89756391_89758254_89758352_89758815_89758961_89761644_89761749_89762318_89762531_89771560_89771622_89772572_89772722_89774620_89774734_89776599_89776696_89780211_89780294_89781398_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_122029.known	chr6	+	1153	7	FSM	ENSG00000118412.13	ENST00000552401.5	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	37.1816113451559	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	1	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_89829935_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_122033.known	chr6	+	1280	7	FSM	ENSG00000118412.13	ENST00000419040.6	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	27.9702222610642	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	7	True	NA	NA	False	TATAAA	-24	NA	89829899	89862793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_122040.nic	chr6	+	1339	7	ISM	ENSG00000118412.13	ENST00000551025.4	6088	9	-59	8595	-14	0	5prime_fragment	FALSE	canonical	3	20	junction_1	39.5263625107767	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	-13	True	NA	NA	False	TATAAA	-24	NA	89829879	89862793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_89830107_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_122058.nnic	chr6	+	1035	3	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTGTGTTTGTGTTT	48	False	NA	NA	False	AATAAA	-16	NA	90587096	90590958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr6_+_90587748_90587882_90587956_90590647
transcript_122062.known	chr6	-	4830	16	FSM	ENSG00000135341.18	ENST00000369332.7	4830	16	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_1	32.7342158740497	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	15	True	NA	-29	True	AATAAA	-27	NA	90587045	90513572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_122063.known	chr6	-	1885	3	FSM	ENSG00000135333.15	ENST00000369297.1	1885	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTTTTTAACTT	8	True	NA	NA	False	AATAAA	-17	NA	93419547	93409653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_93411171_93414702_93414768_93419244
transcript_122065.nnic	chr6	-	1586	4	Antisense	novelGene_ENSG00000280451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	21.6999743983464	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTCTTCCTCTAAGGG	NA	False	NA	NA	False	AATAAA	-19	NA	93835447	93778779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_93779848_93781908_93782004_93816887_93817014_93835150
transcript_122067.nnic	chr6	-	1491	3	Antisense	novelGene_ENSG00000280451.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	4	junction_1	21.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCTCTTCCTCTAAGGG	NA	False	NA	NA	False	AATAAA	-19	NA	93835447	93778779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_93779848_93816887_93817014_93835150
transcript_122087.nnic	chr6	-	974	5	Antisense	novelGene_ENSG00000219627.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	23.1192560433938	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCTCCTCATGCATA	NA	False	NA	NA	False	AATAAA	-20	NA	95517212	95419593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_95420210_95429807_95429887_95485449_95485549_95514090_95514145_95517086
transcript_122092.nnic	chr6	-	605	4	Antisense	novelGene_ENSG00000219627.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	22.3059533657621	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTGTAAGGATTCTAAAA	NA	False	NA	NA	False	AATAAA	-27	NA	95517212	95394639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_95394966_95485449_95485549_95514090_95514145_95517086
transcript_122095.nnic	chr6	-	2186	3	Antisense	novelGene_ENSG00000219627.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	7.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAACTTTAAAATACGCT	NA	False	NA	NA	False	AGTAAA	-11	NA	95517212	95483542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_95485549_95514090_95514145_95517086
transcript_122098.nnic	chr6	-	1253	3	Genic_Genomic	ENSG00000261366.1	novel	2268	1	NA	NA	1	15847	multi-exon	FALSE	canonical	3	20	junction_1	2.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGATGTGGGTCTATAC	-18	True	NA	-5	True	AATAAA	-21	NA	95577449	95559335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_-_95560146_95567227_95567314_95577092
transcript_122099.known	chr6	+	4578	5	FSM	ENSG00000172469.17	ENST00000358812.9	4578	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	19.6643713349804	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGATATTAAAGTCTAT	4	True	NA	14	True	AATAAA	-23	NA	95577534	95609452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_95577639_95586401_95586984_95596736_95596847_95604826_95604904_95605747
transcript_122103.known	chr6	+	1845	3	FSM	ENSG00000172469.17	ENST00000683172.1	1845	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	20.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAATTGAGAAAACA	22	True	NA	NA	False	ATTAAA	-4	NA	95577552	95597913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_95577639_95586401_95586984_95596736
transcript_122104.known	chr6	+	3399	2	FSM	ENSG00000172469.17	ENST00000369293.6	3399	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTATCCTCTTGTAT	-46	True	NA	NA	False	AGTAAA	-14	NA	95577484	95589646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_95577639_95586401
transcript_122110.known	chr6	+	4226	19	FSM	ENSG00000014123.10	ENST00000369278.5	4226	19	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_15	10.0623058987491	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTACTTTGAAGCT	-23	True	NA	72	True	AATAAA	-19	NA	96521805	96555276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893_96543017_96548163_96548282_96549411_96549579_96549668_96549800_96551432_96551514_96551837_96551924_96552481_96552663_96553284
transcript_122112.nic	chr6	+	1470	12	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-49	12309	-49	-12309	5prime_fragment	FALSE	canonical	3	81	junction_6	7.0170983619647	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAAGATGATGATAG	NA	False	NA	NA	False	ATTAAA	-16	NA	96521756	96542967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893
transcript_122113.nic	chr6	+	1371	11	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-49	14646	-49	-14646	5prime_fragment	FALSE	canonical	3	81	junction_6	7.06823881882892	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAGCGAAGAAGGAAAGC	NA	False	NA	NA	False	AGTAAA	-13	NA	96521756	96540630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534
transcript_122116.known	chr6	+	458	2	FSM	ENSG00000014123.10	ENST00000461673.1	458	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTGAAAGGTTTTTT	NA	False	NA	27	True	AATAAA	-24	NA	96521594	96522964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_96521951_96522862
transcript_122118.nnic	chr6	-	621	3	NNC	ENSG00000112218.9	novel	5967	2	NA	NA	-74	-480	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTGCCCACAAAGAT	NA	False	NA	-14	True	AATAAA	-23	NA	96837551	96794604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_96794730_96799669_96799882_96837267
transcript_122119.nnic	chr6	-	1246	3	NNC	ENSG00000112218.9	novel	5967	2	NA	NA	-53	-36904	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTGAGCTGTGTGT	-2	True	NA	-3	True	AATAAA	-25	NA	96837530	96831028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_96831899_96836264_96836378_96837267
transcript_122120.known	chr6	-	5967	2	FSM	ENSG00000112218.9	ENST00000229955.4	5967	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGAGTTTTTTTTAA	4	True	NA	-1	True	AATAAA	-18	NA	96837477	96794124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_96799882_96837267
transcript_122124.nnic	chr6	-	1247	2	NNC	ENSG00000112218.9	novel	5967	2	NA	NA	-167	-36904	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTGAGCTGTGTGT	NA	False	NA	-3	True	AATAAA	-25	NA	96837644	96831028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_96831899_96837267
transcript_122128.known	chr6	-	2407	3	FSM	ENSG00000123545.6	ENST00000316149.8	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_1	16	4882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAGTCCTATACTGCG	-36	True	NA	-3	True	AATAAA	-19	NA	96897891	96889314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_96891392_96896743_96896848_96897665
transcript_122129.known	chr6	-	624	4	FSM	ENSG00000123545.6	ENST00000489477.1	624	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	461.036513376833	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAATCTTCCCTCCTGAA	-19	True	NA	NA	False	NA	NA	NA	96897874	96891150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_96891392_96896083_96896154_96896743_96896848_96897665
transcript_122144.nnic	chr6	-	2851	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-29	-834	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	22.261077142752	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAATAGGAAGAGGA	NA	False	NA	NA	False	AATACA	-10	NA	97283246	97260496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_122148.nic	chr6	-	2176	10	NIC	ENSG00000146263.12	novel	5907	7	NA	NA	-29	0	combination_of_known_junctions	TRUE	canonical	3	13	junction_1	24.864074931962	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCAGGTTTGTCTGT	NA	False	NA	-4	True	AATAAA	-15	NA	97283246	97258662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_97259670_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_12215.known	chr1	-	1771	6	FSM	ENSG00000120334.16	ENST00000367710.7	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	26.7686383665662	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCGTTTATTATGTTTA	740	False	NA	NA	False	AATAAA	-21	NA	173824174	173799849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_122155.nnic	chr6	-	1535	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-29	-2150	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	22.261077142752	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAGGCATTGAATTCTG	NA	False	NA	NA	False	AAAAAG	-10	NA	97283246	97261812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_12216.known	chr1	-	2706	6	FSM	ENSG00000120334.16	ENST00000682279.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	9.8508882848198	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-4	True	NA	NA	False	ATTAAA	-19	NA	173824883	173799549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824211
transcript_122161.nnic	chr6	-	1622	9	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-29	2167	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.353902137946	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTCATCTAAATCAT	NA	False	NA	NA	False	AATAAA	-25	NA	97283246	97263552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_97264120_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_122169.nic	chr6	-	1696	6	ISM	ENSG00000146263.12	ENST00000683635.1	8574	25	-30	129680	-29	-3937	5prime_fragment	FALSE	canonical	3	71	junction_2	10.9799817850486	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTCCAGTGTGGTGGCA	NA	False	NA	NA	False	ATTAAA	-3	NA	97283246	97271840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_122170.nic	chr6	-	1088	6	ISM	ENSG00000146263.12	ENST00000683635.1	8574	25	-30	130288	-29	-4545	5prime_fragment	FALSE	canonical	3	71	junction_2	10.9799817850486	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACATAGTAGTCATTG	NA	False	NA	NA	False	AATAAA	-19	NA	97283246	97272448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_122173.known	chr6	-	8380	5	FSM	ENSG00000146263.12	ENST00000511335.5	8380	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.3624094201738	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCAGGTTTGTCTGT	9448	False	NA	-4	True	AATAAA	-15	NA	97273105	97258662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_97261975_97263334_97268003_97269901_97269993_97272703_97272882_97272974
transcript_122174.known	chr6	-	5907	7	FSM	ENSG00000146263.12	ENST00000508820.1	5907	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	32.9380732081685	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAAACGTCTGTT	-25	True	NA	NA	False	NA	NA	NA	97283217	97265719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_97268003_97269901_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283077
transcript_122185.known	chr6	+	602	6	FSM	ENSG00000271860.8	ENST00000671316.1	602	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.4017542509914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTTTTTCGTTATC	-3	True	NA	NA	False	ATTAAA	-17	NA	97816702	98114593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_97816757_97828048_97828207_97969405_97969467_98099185_98099271_98113798_98113861_98114411
transcript_122188.nnic	chr6	+	753	5	NNC	ENSG00000271860.8	novel	578	6	NA	NA	-36637	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.9530462623758	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATTGGTTCTATTTCT	NA	False	NA	22	True	AATAAA	-16	NA	97779903	97972708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_97780096_97781988_97782148_97828048_97828207_97969405_97969467_97972525
transcript_122192.known	chr6	+	489	4	FSM	ENSG00000271860.8	ENST00000659134.1	489	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.1402688962847	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTATTGGTTCTATTTCT	4	True	NA	22	True	AATAAA	-16	NA	97816669	97972708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_97816757_97828048_97828207_97969405_97969467_97972525
transcript_122198.known	chr6	-	8058	10	FSM	ENSG00000112234.9	ENST00000369244.7	8058	10	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_9	11.5833000265975	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACTTTCAAAATTGATC	10	True	NA	-11	True	AATAAA	-22	NA	98947946	98868534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98934761_98934880_98947805
transcript_1222.known	chr1	-	613	5	FSM	ENSG00000007923.17	ENST00000485073.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	75.6319211708919	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTATGAAAGGATGC	9	True	NA	90	True	NA	NA	NA	6701804	6653808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_122201.known	chr6	-	2810	9	FSM	ENSG00000112234.9	ENST00000229971.2	2810	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	12.3332629502496	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTAGCGACACAGGAGG	NA	False	NA	NA	False	NA	NA	NA	98948006	98873724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98947805
transcript_122211.known	chr6	-	11528	6	FSM	ENSG00000146267.12	ENST00000389677.6	11528	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.4705511657206	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGTTTCTTGACTC	-3	True	NA	NA	False	AATACA	-14	NA	99349674	99271167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99281454_99291703_99291821_99323443_99323668_99333350_99333548_99342897_99343034_99349106
transcript_122216.nnic	chr6	-	1101	4	NIC	ENSG00000146267.12	novel	941	3	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10.6770782520313	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAACACCTACTATGTG	-15	True	NA	-50	True	AATAAA	-14	NA	99350076	99280666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_99281454_99291703_99291821_99342897_99343034_99350015
transcript_122225.known	chr6	-	1325	7	FSM	ENSG00000132423.12	ENST00000254759.8	1325	7	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	28.5292247820838	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTGATCTAGGAGTGTA	-7	True	NA	-7	True	AATAAA	-17	NA	99394195	99369400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383697_99383825_99394073
transcript_122248.known	chr6	-	646	3	FSM	ENSG00000132423.12	ENST00000369240.5	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	156.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCGTGATCTAGGAGT	NA	False	NA	-10	True	AATAAA	-14	NA	99377454	99369403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99369821_99371427_99371588_99377385
transcript_122249.known	chr6	-	5243	12	FSM	ENSG00000132424.17	ENST00000681615.1	5243	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_11	208.336385652571	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATGATATTACAGTT	NA	False	NA	NA	False	AATACA	-2	NA	99425329	99397628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_122253.known	chr6	-	3142	11	FSM	ENSG00000132424.17	ENST00000438806.5	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_10	212.55985039513	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	NA	False	NA	-12	True	AATAAA	-25	NA	99425331	99399963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_12226.known	chr1	-	632	12	FSM	ENSG00000234741.9	ENST00000687189.1	731	12	8	91	0	0	multi-exon	FALSE	canonical	3	1580	junction_11	440.04686076533	32496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	0	True	NA	-12	True	AATAAA	-14	NA	173867987	173863900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_12227.known	chr1	-	856	4	FSM	ENSG00000120334.16	ENST00000484920.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	33.7671766990109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTTTGAACAATCTAGT	895	False	NA	NA	False	AATAAA	-2	NA	173824019	173802962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173803506_173807266_173807311_173811131_173811307_173823925
transcript_122278.known	chr6	+	2588	2	FSM	ENSG00000228506.3	ENST00000418945.3	2600	2	9	3	9	-3	multi-exon	FALSE	canonical	3	26	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGATGGTATTTTATT	11	True	NA	NA	False	AATAAA	-19	NA	99424921	99432323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99425899_99430712
transcript_12228.known	chr1	+	3133	16	FSM	ENSG00000117593.12	ENST00000647730.1	3133	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	69.0569491233302	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	-3	True	NA	-12	True	GATAAA	-5	NA	173824662	173858400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_122280.known	chr6	-	2862	12	FSM	ENSG00000132424.17	ENST00000681611.1	2862	12	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	218.385170386242	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTAAAGGAAATAAATCA	-21	True	NA	-44	True	NA	NA	NA	99425315	99398988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99400312_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_122281.known	chr6	-	2422	11	FSM	ENSG00000132424.17	ENST00000478777.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_2	87.9570349659423	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAACAAGG	-14	True	NA	NA	False	AAAAAG	-6	NA	99425308	99401460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_122282.known	chr6	-	2850	3	FSM	ENSG00000132424.17	ENST00000466057.1	2850	3	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_2	89	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAACTTAGTCAGGCA	36	False	NA	NA	False	NA	NA	NA	99425258	99411790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99412740_99414571_99416429_99425214
transcript_12229.known	chr1	-	542	11	FSM	ENSG00000234741.9	ENST00000449289.6	543	11	0	1	0	0	multi-exon	FALSE	canonical	3	67	junction_4	917.109677192428	2367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	-2	True	NA	-11	True	AATAAA	-15	NA	173867989	173863899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_122294.known	chr6	-	1035	12	FSM	ENSG00000112237.13	ENST00000523799.5	1035	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	414.062857048029	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATATTGGAAAGTGATT	NA	False	NA	NA	False	AATGAA	-22	NA	99568825	99543447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568717
transcript_122298.known	chr6	-	958	11	FSM	ENSG00000112237.13	ENST00000523985.5	958	11	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_10	427.71117591197	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATGAATAGCTTGT	4	True	NA	NA	False	AATAAA	-40	NA	99568660	99543474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99568495
transcript_12230.known	chr1	-	772	10	ISM	ENSG00000234741.9	ENST00000436285.6	805	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2210	junction_4	266.391432035132	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	944	False	NA	-12	True	AATAAA	-14	NA	173867043	173863900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_12231.known	chr1	-	565	11	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	686	-133	2	0	3prime_fragment	FALSE	canonical	3	1286	junction_5	510.943059449876	5129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	944	False	NA	-12	True	AATAAA	-14	NA	173867043	173863900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_12232.known	chr1	-	979	10	FSM	ENSG00000234741.9	ENST00000412059.6	985	10	4	2	0	0	multi-exon	FALSE	canonical	3	1580	junction_9	485.623793832018	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	0	True	NA	-12	True	AATAAA	-14	NA	173867987	173863900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_122326.known	chr6	+	5571	5	FSM	ENSG00000279170.3	ENST00000623858.2	5571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.3675402362457	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCATAATATTGTCCA	-11	True	NA	NA	False	AGTAAA	-16	NA	99520975	99589899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631_99531791_99584879
transcript_12233.known	chr1	-	413	7	ISM	ENSG00000234741.9	ENST00000686995.1	580	11	1785	6	839	0	3prime_fragment	FALSE	canonical	3	199	junction_2	1076.18658027108	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	1781	False	NA	-12	True	AATAAA	-14	NA	173866206	173863900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864076_173864256_173864305_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176
transcript_122337.known	chr6	+	1873	4	FSM	ENSG00000279170.3	ENST00000452647.3	1873	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	4.02768199119819	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAAAT	-5	True	NA	NA	False	NA	NA	NA	99521048	99533185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631
transcript_122339.known	chr6	+	3895	4	FSM	ENSG00000279170.3	ENST00000652704.1	3895	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	26.4952825989835	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTACTTTC	-21	True	NA	1	True	AATAAA	-18	NA	99521032	99553800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531631_99531791_99550225
transcript_12234.known	chr1	-	822	11	FSM	ENSG00000234741.9	ENST00000436656.6	825	11	2	1	0	0	multi-exon	FALSE	canonical	3	1580	junction_10	426.353011013174	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-2	True	NA	-12	True	AATAAA	-14	NA	173867989	173863900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_122343.known	chr6	+	4376	4	FSM	ENSG00000279170.3	ENST00000651400.1	4376	4	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_3	26.1576417557513	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGATGTAGTTTGGAT	31	False	NA	NA	False	ATTAAA	-16	NA	99521017	99579693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531631_99531791_99575652
transcript_12235.known	chr1	-	745	10	ISM	ENSG00000234741.9	ENST00000422183.6	778	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	1286	junction_4	538.557836457587	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	944	False	NA	-13	True	AATAAA	-13	NA	173867043	173863901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_122354.known	chr6	+	336	3	FSM	ENSG00000279170.3	ENST00000636394.1	336	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	35	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTTATTTAGCCGGA	21	True	NA	10	True	AGTAAA	-23	NA	99521074	99531720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99531362_99531537_99531631
transcript_122355.known	chr6	-	5878	18	FSM	ENSG00000123552.18	ENST00000500704.7	5878	18	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	39.4758916398508	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGTGTATTAACAAAAAT	5	True	NA	-5	True	AATAAA	-14	NA	99515423	99432324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_122356.known	chr6	-	1741	14	FSM	ENSG00000123552.18	ENST00000506871.5	1741	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	52.7200937406571	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGTGTAGTGATTT	5198	False	NA	NA	False	ATTAAA	-1	NA	99510230	99462463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99462816_99464603_99464748_99465079_99465137_99466671_99466764_99468099_99468171_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120
transcript_122357.known	chr6	-	1444	8	FSM	ENSG00000123552.18	ENST00000329966.10	1444	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	25.0199920063936	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGCATTCATGTAT	NA	False	NA	-5	True	AATAAA	-21	NA	99515489	99482261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_122358.known	chr6	-	782	6	FSM	ENSG00000123552.18	ENST00000369232.2	782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.3964537892233	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTATGTTAAGAGTGTAT	10	True	NA	NA	False	AATAAA	-9	NA	99515418	99501742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99502010_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_122359.known	chr6	-	2153	12	FSM	ENSG00000112237.13	ENST00000520429.6	2153	12	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_7	104.526480491629	3356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	4	True	NA	-35	True	AATAAA	-20	NA	99568660	99542386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_12236.known	chr1	-	643	3	FSM	ENSG00000234741.9	ENST00000422207.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	2781	junction_1	8.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTGGAGTGTGTAGTGT	3081	False	NA	-15	True	AATAAA	-11	NA	173864906	173863903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483
transcript_122360.known	chr6	-	2212	13	FSM	ENSG00000112237.13	ENST00000326298.8	2212	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	536.093249558528	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	2	True	NA	-35	True	AATAAA	-20	NA	99568631	99542386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549311_99549400_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_122361.known	chr6	-	2186	13	FSM	ENSG00000112237.13	ENST00000520371.5	2186	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	488.304947980483	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGATGCACAATTTAAG	98	False	NA	-45	True	AATAAA	-16	NA	99568713	99542501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99544178_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_122362.known	chr6	-	1426	12	FSM	ENSG00000112237.13	ENST00000518714.5	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	380.711838707744	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTAGTCTTCTGGAT	2	True	NA	NA	False	AATAAA	-14	NA	99568662	99543779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_122368.known	chr6	-	852	4	FSM	ENSG00000112249.14	ENST00000324723.10	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	132.114428516427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTTGACGAACTGCCA	7	True	NA	NA	False	NA	NA	NA	100881348	100848419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_100848708_100864063_100864215_100867907_100868033_100881060
transcript_12237.known	chr1	-	723	9	ISM	ENSG00000234741.9	ENST00000456812.7	753	10	946	0	2	0	3prime_fragment	FALSE	canonical	3	199	junction_1	1020.20733186936	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	944	False	NA	-12	True	AATAAA	-14	NA	173867043	173863900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864305_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_122370.known	chr6	-	3433	4	FSM	ENSG00000112249.14	ENST00000369143.2	3433	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	123.828734773297	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTTTATATTTGTG	-14	True	NA	-11	True	AATAAA	-20	NA	100881311	100856302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_100859203_100864063_100864215_100867907_100868039_100881060
transcript_122379.known	chr6	+	1517	1	FSM	ENSG00000260000.2	ENST00000565695.2	1517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACTTTATTTTTACTT	-10	True	NA	NA	False	AATAAA	-16	NA	100881470	100882987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_100881500_100883000
transcript_12238.known	chr1	-	497	8	ISM	ENSG00000234741.9	ENST00000456812.7	753	10	959	583	15	-340	internal_fragment	FALSE	canonical	3	1286	junction_2	610.331726462365	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCAGCTTTTGGTACA	957	False	NA	NA	False	NA	NA	NA	173867030	173864483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_122381.known	chr6	-	4575	24	FSM	ENSG00000085382.12	ENST00000262903.9	4575	24	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_18	21.1335657011271	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTTATGTCTGT	-39	True	NA	-1	True	AATAAA	-16	NA	104859919	104728093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777111_104777205_104777318_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
transcript_122382.known	chr6	+	2635	5	FSM	ENSG00000187772.8	ENST00000637759.1	2635	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	136.277290844807	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGACGAAAATGCCTCAG	142	False	NA	96	True	NA	NA	NA	104940865	105080479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_104941013_104950460_104950510_104958098_104958287_105026297_105026483_105078413
transcript_122386.nnic	chr6	+	1073	4	NNC	ENSG00000187772.8	novel	912	6	NA	NA	344	174	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	176.371451456546	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATAACAGGTCTTCTTCA	283	False	NA	NA	False	AAAAAG	-27	NA	104957450	105078776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_104957788_104958098_104958287_105026297_105026483_105078413
transcript_12239.known	chr1	-	1114	6	ISM	ENSG00000234741.9	ENST00000686231.1	465	8	946	487	2	-487	internal_fragment	FALSE	canonical	3	2783	junction_2	130.302110497106	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTGGCATATACACCTTA	944	False	NA	NA	False	TTTAAA	-34	NA	173867043	173864630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_122392.known	chr6	+	5446	4	FSM	ENSG00000187772.8	ENST00000345080.5	5446	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	163.905121606644	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGGAGATTTT	0	True	NA	13	True	AATAAA	-21	NA	104957106	105083332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_104957261_104958098_104958287_105026297_105026483_105078413
transcript_122397.nnic	chr6	-	636	4	NNC	ENSG00000203809.7	novel	2425	3	NA	NA	39	-1799	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.34209919681348	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTACAGAGGCATATGGT	881	False	NA	-13	True	AATAAA	-23	NA	104940488	104926499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_104926883_104931478_104931547_104940177_104940214_104940339
transcript_122398.nnic	chr6	-	568	3	NNC	ENSG00000203809.7	novel	2425	3	NA	NA	39	-1799	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	0.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTACAGAGGCATATGGT	881	False	NA	-13	True	AATAAA	-23	NA	104940488	104926499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_104926883_104940177_104940214_104940339
transcript_12240.known	chr1	-	632	8	FSM	ENSG00000234741.9	ENST00000690941.1	1443	8	0	811	0	289	multi-exon	FALSE	canonical	3	1580	junction_7	542.651013496685	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCATGCCCCGCCTC	-2	True	NA	NA	False	NA	NA	NA	173867989	173864954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_122402.nnic	chr6	-	748	3	NNC	ENSG00000203809.7	novel	879	4	NA	NA	39	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTGTATCTATTGAGC	881	False	NA	NA	False	AATAAA	-20	NA	104940488	104936119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_104936683_104940177_104940214_104940339
transcript_122404.known	chr6	-	1797	3	FSM	ENSG00000203809.7	ENST00000636682.1	1797	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTATAATTATATAATAT	106	False	NA	NA	False	AATATA	-18	NA	104941263	104935205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_104936683_104940177_104940214_104940979
transcript_122408.known	chr6	+	1543	4	FSM	ENSG00000203808.13	ENST00000663357.1	1543	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTATTTTCTTTCTTC	-16	True	NA	NA	False	AATAAA	-35	NA	105137249	105169952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_105137312_105137769_105137924_105147275_105147381_105168730
transcript_122409.known	chr6	+	1495	4	FSM	ENSG00000203808.13	ENST00000653051.2	1566	4	0	71	0	-11	multi-exon	FALSE	canonical	0	0	junction_3	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTACCACCGAAATATCC	-25	True	NA	NA	False	NA	NA	NA	105137240	105169874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_105137333_105137769_105137924_105147275_105147381_105168730
transcript_12241.known	chr1	+	2300	5	FSM	ENSG00000185278.15	ENST00000427304.5	2300	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.27760839478607	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAATACTGGTGG	-15	True	NA	NA	False	NA	NA	NA	173868354	173886636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173868406_173868924_173869121_173870196_173871149_173873466_173873567_173885635
transcript_122410.known	chr6	-	1029	4	FSM	ENSG00000132429.10	ENST00000474760.1	1029	4	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_2	4.49691252107735	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCGAGATGCCATTGC	-29	True	NA	-80	True	TATAAA	-8	NA	105179995	105158359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_105158752_105159710_105159820_105161795_105162161_105179832
transcript_122419.known	chr6	+	5066	7	FSM	ENSG00000057657.17	ENST00000652320.1	5066	7	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_1	22.5197444232586	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTAGTGTCTTGAGTGA	NA	False	NA	15	True	ATTAAA	-27	NA	105993462	106109939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_105993640_106088200_106088450_106095614_106095735_106099299_106099553_106104824_106105934_106106370_106106500_106106910
transcript_12242.known	chr1	-	483	9	FSM	ENSG00000234741.9	ENST00000452197.5	483	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1008.74655358767	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	4	True	NA	-12	True	AATAAA	-14	NA	173867983	173863900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_122420.known	chr6	-	1888	9	FSM	ENSG00000057663.16	ENST00000646025.1	1888	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	157.789218579724	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAATATGTTTTGTCATT	-11	True	NA	-47	True	AATAAA	-4	NA	106325791	106185941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106186677_106201971_106202090_106217463_106217602_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_122427.known	chr6	-	3092	8	FSM	ENSG00000057663.16	ENST00000343245.7	3092	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	129.233849107353	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	10	True	NA	NA	False	AATAAA	-1	NA	106325417	106184475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325275
transcript_122429.known	chr6	-	3185	8	FSM	ENSG00000057663.16	ENST00000369076.8	3185	8	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_5	52.5869542291816	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	20	True	NA	NA	False	AATAAA	-1	NA	106325760	106184475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_12243.known	chr1	-	424	4	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	2824	-80	1	-23	3prime_fragment	FALSE	canonical	3	2781	junction_1	8.25967446224258	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCACAAGAAGATTAAAACA	3082	False	NA	-65	True	NA	NA	NA	173864905	173863953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674
transcript_122433.known	chr6	-	3035	7	FSM	ENSG00000057663.16	ENST00000635758.2	3035	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	111.613917889601	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	42	True	NA	NA	False	AATAAA	-1	NA	106325738	106184475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106316100_106316267_106325525
transcript_122445.known	chr6	+	10039	22	FSM	ENSG00000112297.18	ENST00000633556.3	10039	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	11.1137185149267	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTCGTGCGTGTCCTCT	11	True	NA	NA	False	ACTAAA	-35	NA	106360716	106572017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_106361082_106451693_106451833_106511429_106513040_106519130_106521454_106525132_106525181_106525267_106525387_106527304_106527471_106530175_106530316_106539402_106539530_106541585_106541622_106543439_106543598_106544570_106544698_106544787_106544934_106551851_106551979_106552183_106552217_106553454_106553568_106555767_106555898_106558485_106558626_106560802_106560927_106561341_106561501_106563763_106563927_106568471
transcript_122447.nnic	chr6	-	1193	9	NNC	ENSG00000130347.13	novel	2893	9	NA	NA	-599	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_8	63.1783190659581	98	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACGTTCTTATTTGGT	399	False	NA	-15	True	AATAAA	-17	NA	106630097	106571974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106602873_106602923_106619201_106619327_106621424_106621494_106622817_106622970_106629842
transcript_122455.known	chr6	+	4106	11	FSM	ENSG00000130348.11	ENST00000369046.8	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_5	22.6294056484036	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGAACAGAGTGTTTT	3	True	NA	11	True	ATTAAA	-24	NA	106629577	106668417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466_106652583_106654729_106654923_106655614_106655733_106662979_106663186_106665781
transcript_122469.known	chr6	+	2158	7	FSM	ENSG00000130348.11	ENST00000369044.1	2158	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_5	24.0393196428037	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	6	True	NA	NA	False	NA	NA	NA	106629613	106653823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466
transcript_122475.nnic	chr6	+	427	4	NNC	ENSG00000130348.11	novel	413	4	NA	NA	-12	-2074	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	113.408798404513	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGTACAGAGATTCTATA	-9	True	NA	6	True	AATAAA	-20	NA	106629565	106666343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_106629706_106640348_106640509_106640822_106640861_106666254
transcript_122487.known	chr6	-	1026	2	FSM	ENSG00000272398.6	ENST00000615659.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	0	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAATCTACCCCCAGAT	2	True	NA	NA	False	NA	NA	NA	106975327	106971002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971835_106975133
transcript_122488.known	chr6	-	586	2	FSM	ENSG00000272398.6	ENST00000620405.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGAACTCACTTTCCT	-2	True	NA	NA	False	NA	NA	NA	106974732	106971093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971525_106974577
transcript_122489.known	chr6	-	566	2	FSM	ENSG00000272398.6	ENST00000619869.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACACTTAATACTACCT	0	True	NA	-74	True	NA	NA	NA	106975459	106971359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971835_106975368
transcript_122493.known	chr6	-	2156	2	FSM	ENSG00000272398.6	ENST00000606017.2	2156	2	0	0	0	0	multi-exon	FALSE	canonical	3	5731	junction_1	0	53827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	1	True	NA	-21	True	AATAAA	-22	NA	106974729	106969830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971835_106974577
transcript_1225.known	chr1	-	581	5	FSM	ENSG00000007923.17	ENST00000460594.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	382.176987794922	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAGCATTGTCTTTCA	-10	True	NA	NA	False	ATTAAA	-16	NA	6701823	6654107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6654288_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_122500.known	chr6	+	1146	5	FSM	ENSG00000130349.10	ENST00000625458.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	95.5955019862336	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATCTGCCGAGCCAT	237	False	NA	8	True	AATAAA	-15	NA	107028568	107051335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_107028798_107030024_107030108_107039748_107040231_107044259_107044333_107051056
transcript_122508.known	chr6	+	1420	4	FSM	ENSG00000130349.10	ENST00000405204.6	1420	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	88.1450824241237	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATCTGCCGAGCCATT	-10	True	NA	9	True	AATAAA	-16	NA	107028212	107051336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_107028798_107039748_107040231_107044259_107044333_107051056
transcript_12251.known	chr1	+	6821	9	FSM	ENSG00000152061.24	ENST00000489615.5	6821	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	136.466513749711	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCTTTTTTATTTTT	38	False	NA	19	True	AATAAA	-19	NA	174799931	174995308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174800501_174811831_174811961_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_12252.nic	chr1	+	1599	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	3	235	junction_1	51.9230199429887	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	NA	False	NA	NA	False	NA	NA	NA	174874345	174990409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_122521.known	chr6	+	1158	4	FSM	ENSG00000130349.10	ENST00000311381.8	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	31.689465477067	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTATTTAAAATGTT	-24	True	NA	NA	False	AATAAA	-18	NA	107028198	107051586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_107028272_107039748_107040231_107044259_107044333_107051056
transcript_122522.known	chr6	-	6446	4	FSM	ENSG00000178409.14	ENST00000369042.6	6446	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	18.624953392932	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTCTCGTAACATGTTA	-6	True	NA	-43	True	TATAAA	-21	NA	107115515	107065181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107070951_107098550_107098754_107099248_107099297_107115089
transcript_122523.known	chr6	-	3536	8	FSM	ENSG00000164494.12	ENST00000369037.9	3536	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	10.5926428068095	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCCAGGTTTGTTTTA	0	True	NA	-5	True	ATTAAA	-17	NA	107459564	107152561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107154778_107193821_107193855_107210438_107210571_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107458989
transcript_122530.nnic	chr6	-	989	5	NNC	ENSG00000164494.12	novel	1236	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.6183802907977	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	-12	True	NA	-2	True	AATAAA	-15	NA	107459576	107264185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_107264513_107274028_107274228_107324555_107324675_107334197_107334333_107459367
transcript_122535.known	chr6	-	1236	4	FSM	ENSG00000164494.12	ENST00000369031.4	1236	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	20.9814733091416	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	0	True	NA	-2	True	AATAAA	-15	NA	107459564	107264185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107264513_107274028_107274228_107334197_107334333_107458989
transcript_122536.nnic	chr6	-	870	4	NNC	ENSG00000164494.12	novel	1236	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	26.4952825989835	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	-12	True	NA	-2	True	AATAAA	-15	NA	107459576	107264185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_107264513_107274028_107274228_107334197_107334333_107459367
transcript_122542.known	chr6	-	6430	21	FSM	ENSG00000025796.14	ENST00000369002.9	6430	21	0	0	0	0	multi-exon	TRUE	canonical	3	420	junction_10	44.163870980701	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTGATTTGG	-17	True	NA	2	True	AATAAA	-19	NA	107958208	107867755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107871848_107872807_107872913_107876563_107876663_107881148_107881251_107882987_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_122550.nic	chr6	-	1881	16	ISM	ENSG00000025796.14	ENST00000369002.9	6430	21	-92	25810	-92	14	5prime_fragment	FALSE	canonical	3	420	junction_5	34.6072567855677	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTTAAAAAAAAAACCTAC	-8	True	NA	NA	False	AGTAAA	-37	NA	107958300	107893565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_122559.known	chr6	-	724	7	FSM	ENSG00000025796.14	ENST00000484803.5	724	7	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	11.6428327977153	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCCATGACCCCACCTC	6349	False	NA	NA	False	NA	NA	NA	107957931	107911167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_122563.known	chr6	-	482	3	FSM	ENSG00000025796.14	ENST00000460009.1	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGTTATTGGTGCA	6238	False	NA	0	True	AATAAA	-28	NA	107958042	107954583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107954767_107955964_107956107_107957885
transcript_122564.known	chr6	-	583	4	FSM	ENSG00000025796.14	ENST00000446496.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	258.341290200042	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTATTTTTATATA	22	True	NA	NA	False	ATTAAA	-11	NA	107958111	107924817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107924933_107929414_107929515_107955964_107956107_107957885
transcript_122565.known	chr6	-	1212	1	FSM	ENSG00000225093.1	ENST00000417878.1	1212	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	270	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGGAACAGATTTCGCA	26	False	NA	NA	False	AAGAAA	-31	NA	108005568	108004356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108004400_108005600
transcript_122566.known	chr6	-	4471	6	FSM	ENSG00000081087.15	ENST00000193322.8	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	28.2658804922118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGATCCATGCTTCT	-6	True	NA	46	True	ATTAAA	-20	NA	108074741	108041408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
transcript_122569.known	chr6	-	2465	2	FSM	ENSG00000081087.15	ENST00000492130.1	2465	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTTTAATGACAAATAAC	121	False	NA	-17	True	AATAAA	-19	NA	108044238	108041471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108042265_108042566
transcript_122571.known	chr6	-	1535	4	FSM	ENSG00000112335.15	ENST00000230085.13	1535	4	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_1	81.8711725144381	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTCTCCTATTTTTC	-21	True	NA	-13	True	ATTAAA	-20	NA	108261040	108211221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260759
transcript_122573.known	chr6	-	890	4	FSM	ENSG00000112335.15	ENST00000349379.5	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	400.841614606069	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGTTGACAAGAAGTTA	NA	False	NA	NA	False	NA	NA	NA	108261244	108212004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260825
transcript_122574.known	chr6	-	1072	3	FSM	ENSG00000112335.15	ENST00000426155.6	1072	3	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_2	396.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTTGCCTCCAGC	55	False	NA	-5	True	AATAAA	-26	NA	108260964	108211512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108212255_108214497_108214623_108260759
transcript_122576.known	chr6	+	5048	13	FSM	ENSG00000135537.17	ENST00000368977.9	5048	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	7.91447338038918	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGCTGGTAGGAAAG	-5	True	NA	NA	False	NA	NA	NA	108295053	108526001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108510211_108510353_108519696_108519811_108522296
transcript_122577.nic	chr6	+	1556	12	NIC	ENSG00000135537.17	novel	5048	13	NA	NA	-121	1	combination_of_known_junctions	FALSE	canonical	2	6	junction_10	10.3348883571799	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGGCAGAACTCCTTATT	-4	True	NA	13	True	AATAAA	-20	NA	108294869	108522466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108519696_108519811_108522296
transcript_122588.nic	chr6	+	1725	2	ISM	ENSG00000118689.15	ENST00000540898.1	2553	3	7744	0	7744	0	3prime_fragment	FALSE	canonical	3	75	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	7737	False	NA	NA	False	ACTAAA	-29	NA	108664089	108680751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108664890_108679826
transcript_122595.nnic	chr6	+	2199	3	NNC	ENSG00000286511.1	novel	2167	2	NA	NA	-17277	14	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	3	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATTTGTTAAAAGGTCT	1566	False	NA	8	True	AATAAA	-14	NA	108781651	108837127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_108781788_108782187_108782352_108835228
transcript_1226.nic	chr1	-	1774	4	FSM	ENSG00000007923.17	ENST00000693337.1	1512	4	-54	-208	48	208	multi-exon	FALSE	canonical	3	807	junction_1	51.0838091331838	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6701876	6666388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6667811_6678393_6678468_6680907_6681038_6701728
transcript_122601.nic	chr6	+	1074	7	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-32	74657	-26	19563	5prime_fragment	FALSE	canonical	2	5	junction_5	12.9443252259651	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTTGTTTTTTTTTTA	-33	True	NA	NA	False	AAAACA	-20	NA	108848389	108899819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823_108868996_108876142_108876351_108894466_108894544_108899693
transcript_122603.nic	chr6	+	1399	7	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-32	74332	-26	19888	5prime_fragment	FALSE	canonical	2	5	junction_5	12.9443252259651	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGGCTTGGAAGCTGAG	-33	True	NA	NA	False	ATTAAA	-6	NA	108848389	108900144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823_108868996_108876142_108876351_108894466_108894544_108899693
transcript_122609.nnic	chr6	+	997	6	NIC	ENSG00000118690.13	novel	3734	18	NA	NA	-26	19563	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	14.4138821973818	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTTGTTTTTTTTTTA	-33	True	NA	NA	False	AAAACA	-20	NA	108848389	108899819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823_108868996_108876142_108876351_108899693
transcript_12261.known	chr1	+	710	7	FSM	ENSG00000152061.24	ENST00000465412.5	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	52.382142843615	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAAGGAGTGAAATC	39	False	NA	NA	False	NA	NA	NA	174874470	174982900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833
transcript_122619.nnic	chr6	+	1261	4	NNC	ENSG00000118690.13	novel	3734	18	NA	NA	-26	-13984	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.2685791225499	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAACCAAAAA	-33	True	NA	NA	False	AATAGA	-36	NA	108848389	108862363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_108848547_108854224_108854486_108858198_108858272_108861593
transcript_122620.nic	chr6	+	1190	4	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-32	104954	-26	-6825	5prime_fragment	FALSE	canonical	3	28	junction_3	3.09120616516523	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATTAGGATAAGTATTC	-33	True	NA	-65	True	AAAAAG	-9	NA	108848389	108869522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823
transcript_122621.nic	chr6	+	1268	4	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-32	104876	-26	-6747	5prime_fragment	FALSE	canonical	3	28	junction_3	3.09120616516523	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTTAATTTTATTAGAAA	-33	True	NA	13	True	AATAAA	-26	NA	108848389	108869600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823
transcript_122625.known	chr6	-	2676	10	FSM	ENSG00000080546.14	ENST00000356644.7	2676	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	9.6148034012373	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTGCTGTCTCAATC	-26	True	NA	-5	True	AATAAA	-18	NA	109009555	108986441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109009358
transcript_122626.known	chr6	-	3509	10	FSM	ENSG00000080546.14	ENST00000436639.7	5664	10	27	2128	27	5	multi-exon	FALSE	canonical	3	19	junction_9	28.6296056729333	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTCTCAATCTCTTA	30	True	NA	0	True	AATAAA	-23	NA	109094819	108986436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109093794
transcript_122637.known	chr6	+	1649	11	FSM	ENSG00000183137.15	ENST00000368968.6	1649	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	33.8586768790513	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTTATTGATTGAAG	18	False	NA	NA	False	AATAAA	-15	NA	109095519	109163163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160731_109162748
transcript_122643.nic	chr6	+	1534	11	NIC	ENSG00000183137.15	novel	1649	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	27.7865075171386	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	8	True	NA	13	True	AATAAA	-18	NA	109095509	109160765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_109095576_109140420_109140676_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
transcript_122647.nic	chr6	+	1642	10	ISM	ENSG00000183137.15	ENST00000368968.6	1649	11	-373	2398	-6	0	5prime_fragment	FALSE	canonical	2	16	junction_1	26.6073414170591	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	-18	True	NA	13	True	AATAAA	-18	NA	109095146	109160765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
transcript_12266.known	chr1	+	648	4	FSM	ENSG00000152061.24	ENST00000478442.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	94.9116548281728	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	26	False	NA	16	True	AATAAA	-20	NA	174874457	174958182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890
transcript_122663.nic	chr6	+	1131	9	NIC	ENSG00000183137.15	novel	1649	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	19	junction_1	26.6258802671386	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	-7	True	NA	13	True	AATAAA	-18	NA	109095494	109160765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_109095576_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
transcript_122671.known	chr6	+	3832	8	FSM	ENSG00000183137.15	ENST00000521277.5	3832	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	40.9419698837169	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGATATTTCG	NA	False	NA	NA	False	NA	NA	NA	109095109	109158488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109106034_109106091_109145218_109145382_109146757_109146938_109150165_109150240_109153832_109153950_109155229_109155308_109155790
transcript_122673.known	chr6	+	908	7	FSM	ENSG00000183137.15	ENST00000519095.5	908	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	32.316146634977	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATATAAAATAAAAGACA	10	True	NA	NA	False	AAAAAG	-7	NA	109095511	109155974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_122676.known	chr6	+	866	7	FSM	ENSG00000183137.15	ENST00000523209.5	866	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	39.2159264698526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAGAAGAAATCTTCA	24	False	NA	NA	False	AGTAAA	-38	NA	109095525	109155854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109140420_109140676_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_122680.nic	chr6	+	642	6	ISM	ENSG00000183137.15	ENST00000520761.1	865	8	-56	3592	-1	0	5prime_fragment	FALSE	canonical	2	19	junction_1	33.0006060550409	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAGAAGAAATCTTCA	-7	True	NA	NA	False	AGTAAA	-38	NA	109095494	109155854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_109095576_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_122688.known	chr6	+	1680	11	FSM	ENSG00000183137.15	ENST00000368970.6	1680	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	33.6089273854433	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTATTGATTGAAGCCC	27	False	NA	NA	False	AATAAA	-18	NA	109095528	109163166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159217_109159463_109160571_109160717_109162748
transcript_122691.known	chr6	-	778	6	FSM	ENSG00000135535.17	ENST00000506649.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	364.127120659805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATCATTGTGTTCAACA	1016	False	NA	-45	True	AAGAAA	-8	NA	109381901	109368683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109381709
transcript_122692.known	chr6	-	3020	6	FSM	ENSG00000135535.17	ENST00000310786.10	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_2	51.1570132044473	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	2	True	NA	-1	True	AATAAA	-22	NA	109382467	109366513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_122696.known	chr6	-	2954	5	FSM	ENSG00000135535.17	ENST00000275080.11	2954	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	403.386523696566	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	0	True	NA	-5	True	AATAAA	-18	NA	109382444	109366517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109369018_109370410_109370468_109377899_109377972_109379578_109379663_109382203
transcript_122698.known	chr6	-	2936	5	FSM	ENSG00000135535.17	ENST00000324953.9	2936	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	342.741155976343	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	0	True	NA	-5	True	AATAAA	-18	NA	109382444	109366517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109369018_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_1227.known	chr1	-	745	4	FSM	ENSG00000007923.17	ENST00000465911.1	745	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	420.155526759635	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTAATATCTTATTTAT	-6	True	NA	NA	False	AATAAA	-16	NA	6701819	6670460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6670911_6678393_6678468_6680907_6681038_6701728
transcript_122702.known	chr6	-	590	4	FSM	ENSG00000135535.17	ENST00000512212.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_3	54.4487526640112	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATAGTCGGTGAATGTG	-4	True	NA	NA	False	NA	NA	NA	109382411	109375886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109376113_109377899_109377972_109379578_109379663_109382203
transcript_122703.known	chr6	+	872	1	FSM	ENSG00000260273.1	ENST00000563105.1	872	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGATCTTTTCAGTGT	376	False	NA	NA	False	AATAGA	-15	NA	109382794	109383666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109382800_109383700
transcript_122704.known	chr6	+	1684	10	FSM	ENSG00000135587.9	ENST00000258052.8	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	6.97791931915893	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	-2	True	NA	5	True	AATAAA	-14	NA	109440723	109443919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442626_109442751_109442885_109442976_109443082_109443266_109443421_109443516
transcript_122706.known	chr6	-	3585	8	FSM	ENSG00000185250.16	ENST00000521072.7	3585	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	6.1145527311522	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGTAGCCTCAGAGCTTG	-11	True	NA	NA	False	AATAAA	-21	NA	109440628	109390214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109392938_109400034_109400171_109419186_109419244_109426846_109426995_109427093_109427157_109431156_109431346_109436103_109436200_109440455
transcript_122709.known	chr6	-	3430	25	FSM	ENSG00000135596.18	ENST00000358807.8	3430	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_24	47.479801992239	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-28	True	NA	-4	True	ATTAAA	-17	NA	109455772	109444061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_122710.known	chr6	-	3142	24	FSM	ENSG00000135596.18	ENST00000358577.7	3142	24	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_17	59.137755301325	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	2	True	NA	-4	True	ATTAAA	-17	NA	109455742	109444061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_122714.nnic	chr6	-	774	2	NNC	ENSG00000112365.5	novel	5501	7	NA	NA	66	-18786	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGAATCGGAGCCTACTT	79	False	NA	14	True	AAGAAA	-2	NA	109483153	109481379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_109482055_109483054
transcript_122715.known	chr6	-	5501	7	FSM	ENSG00000112365.5	ENST00000230122.4	5501	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	13.1328680120613	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	13	True	NA	NA	False	ATTAAA	-22	NA	109483219	109462593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483097
transcript_122719.known	chr6	-	2566	12	FSM	ENSG00000155085.16	ENST00000285397.9	2566	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	7.99276532375755	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTACTATAAACATTCTTG	NA	False	NA	NA	False	AATAAA	-32	NA	109691217	109631692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109633104_109633183_109633324_109641517_109641617_109644613_109644689_109656755_109656885_109659227_109659414_109662550_109662664_109671918_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109691146
transcript_122720.known	chr6	-	988	9	FSM	ENSG00000155085.16	ENST00000532976.1	988	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	6.35290287978653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCCAGTATCTCATTGAG	522	False	NA	NA	False	TATAAA	-42	NA	109690670	109644669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109644689_109656755_109656885_109659227_109659414_109662550_109662664_109671918_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109690471
transcript_122728.nic	chr6	-	699	5	ISM	ENSG00000155085.16	ENST00000532976.1	988	9	97	26994	-67	-26994	5prime_fragment	FALSE	canonical	3	18	junction_4	5.35607132140714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGGTCCATCTTGCAG	619	False	NA	NA	False	AGTAAA	-14	NA	109690573	109671663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109690471
transcript_122730.known	chr6	+	3025	23	FSM	ENSG00000112367.12	ENST00000230124.8	3025	23	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	21.2298032363596	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	5	True	NA	6	True	AATAAA	-14	NA	109691295	109825426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_122731.known	chr6	+	2966	22	FSM	ENSG00000112367.12	ENST00000675726.1	2966	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_21	50.575643264421	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATGACTAGATAAT	NA	False	NA	-13	True	NA	NA	NA	109691248	109825407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109825087
transcript_122732.known	chr6	+	2915	22	FSM	ENSG00000112367.12	ENST00000676442.1	2915	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	50.1363220993602	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTAGATAATTTGCTGT	-26	True	NA	-6	True	AATAAA	-2	NA	109691264	109825414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_122733.known	chr6	+	2811	22	FSM	ENSG00000112367.12	ENST00000674649.1	2811	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	51.2522550800806	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTCTGAAGCCTTTCT	21	True	NA	0	True	ATTAAA	-6	NA	109691311	109825352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_122734.known	chr6	+	2781	21	FSM	ENSG00000112367.12	ENST00000674569.1	2781	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	49.0061220665337	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGACTAGATAATTTGCT	5	True	NA	-8	True	NA	NA	NA	109691295	109825412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_122735.known	chr6	+	2725	20	FSM	ENSG00000112367.12	ENST00000675714.1	2725	20	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	21.9046030402067	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAATGGTGAATTTCTG	-3	True	NA	NA	False	AATAAA	-20	NA	109691287	109791772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375
transcript_122738.known	chr6	+	2187	15	FSM	ENSG00000112367.12	ENST00000675681.1	2187	15	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	22.0546630730398	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGAGTCATTTTTTTA	21	True	NA	NA	False	GATAAA	-11	NA	109691311	109767208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728
transcript_122742.known	chr6	+	1387	9	FSM	ENSG00000112367.12	ENST00000676435.1	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	22.2542130842679	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	5	True	NA	4	True	AATAAA	-20	NA	109691295	109743480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109
transcript_122743.known	chr6	+	1129	9	FSM	ENSG00000112367.12	ENST00000454215.6	1129	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	78.2527954772224	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGCCTAAACCACCTA	5	True	NA	NA	False	NA	NA	NA	109691295	109743246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741467_109741545_109743109
transcript_122745.known	chr6	+	3209	24	FSM	ENSG00000112367.12	ENST00000675122.1	3209	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	65.5549813252932	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGCCTTTGCTTTAT	NA	False	NA	11	True	AATAAA	-19	NA	109691215	109825431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109785670_109785770_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_122746.known	chr6	+	1158	7	FSM	ENSG00000112367.12	ENST00000368941.2	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	82.2896307765039	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	4	True	NA	4	True	AATAAA	-20	NA	109691294	109743480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109
transcript_122749.known	chr6	+	3033	23	FSM	ENSG00000112367.12	ENST00000675523.1	3033	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.9899520161725	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	-5	True	NA	6	True	AATAAA	-14	NA	109691285	109825426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715079_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_122752.known	chr6	-	1550	4	FSM	ENSG00000286691.1	ENST00000653781.1	1550	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACACATTGTACAAAAT	NA	False	NA	NA	False	NA	NA	NA	110040241	110020010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110020268_110023627_110023690_110036814_110037326_110039521
transcript_122754.known	chr6	-	2815	11	FSM	ENSG00000112290.13	ENST00000392586.5	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	159.651777315506	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	13	True	NA	-4	True	AATAAA	-19	NA	110180001	110099818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110178597_110178743_110179840
transcript_122758.known	chr6	-	2675	9	FSM	ENSG00000112290.13	ENST00000392587.6	2675	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_8	63.0634601017102	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	312	False	NA	-4	True	AATAAA	-19	NA	110179702	110099818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110179438
transcript_122761.nnic	chr6	-	1512	3	NNC	ENSG00000112290.13	novel	3075	10	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	187	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	-2	True	NA	-4	True	AATAAA	-19	NA	110180016	110099818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_110100680_110101587_110102134_110179911
transcript_122762.known	chr6	+	3933	16	FSM	ENSG00000168438.15	ENST00000368932.5	3933	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.0407570136008	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAAAATGTTCATCTTG	0	True	NA	20	True	AATAAA	-20	NA	110180140	110232223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110180181_110180383_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_122767.known	chr6	+	3859	15	FSM	ENSG00000168438.15	ENST00000307731.2	3859	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	13.431610598335	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCTTGTTCATCTTT	-1	True	NA	29	True	AATAAA	-29	NA	110180426	110232232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_12277.known	chr1	+	772	4	FSM	ENSG00000152061.24	ENST00000486220.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	128.971142336398	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	25	False	NA	21	True	AATAAA	-25	NA	174875545	174958187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174875714_174877391_174877606_174957456_174957550_174957890
transcript_122770.known	chr6	-	1117	2	FSM	ENSG00000155111.15	ENST00000497709.1	1117	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	110815958	110813158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110814125_110815807
transcript_122771.known	chr6	-	1083	2	FSM	ENSG00000155111.15	ENST00000468997.5	1083	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	7	True	NA	NA	False	AATAAA	-19	NA	110815125	110813158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110814125_110815008
transcript_122773.known	chr6	+	311	2	FSM	ENSG00000271607.1	ENST00000605131.1	311	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTGGTGAAGCATCTA	NA	False	NA	NA	False	NA	NA	NA	110863859	110864451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110863966_110864246
transcript_122775.known	chr6	+	1605	8	FSM	ENSG00000123505.19	ENST00000368877.9	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	268.664649475049	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCGTCCTCATTAGGT	1	True	NA	NA	False	NA	NA	NA	110874784	110893982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110875216_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_122781.known	chr6	+	3121	6	FSM	ENSG00000123505.19	ENST00000451850.6	3121	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	279.246414480115	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTTGCCCTGTTTT	453	False	NA	28	True	AATAAA	-29	NA	110874769	110895713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110875216_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_122783.known	chr6	+	3059	5	FSM	ENSG00000123505.19	ENST00000675380.1	3059	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	338.764206344177	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTCTGTTGCCCT	0	True	NA	23	True	AATAAA	-24	NA	110874783	110895708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110875216_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_122787.known	chr6	+	800	6	FSM	ENSG00000155115.7	ENST00000480191.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	894.700262657836	4857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCATTTTATTGGC	176	False	NA	44	True	CATAAA	-34	NA	110958927	110967890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110959043_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_122790.known	chr6	+	788	6	FSM	ENSG00000155115.7	ENST00000329970.8	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	2181	junction_1	55.4595347979047	19180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCAGTCTTTTAATATT	6	True	NA	26	True	CATAAA	-16	NA	110958705	110967872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110958827_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_122793.known	chr6	+	3671	10	FSM	ENSG00000197498.13	ENST00000441448.7	3671	10	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_7	40.8900966005218	2880	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	-26	True	NA	21	True	AATAAA	-17	NA	110982037	111028263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_122795.known	chr6	+	646	2	FSM	ENSG00000112394.18	ENST00000439288.5	646	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTCTTTGAAGAGAAA	NA	False	NA	-10	True	AATAAA	-3	NA	111172694	111177712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111172840_111177211
transcript_122797.known	chr6	+	14805	4	FSM	ENSG00000173214.7	ENST00000671876.2	14805	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.94392028877595	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTTGGTTTAAGATTC	0	True	NA	5	True	AATAAA	-16	NA	111259338	111280005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111259728_111262256_111262426_111263829_111263947_111265875
transcript_1228.nnic	chr1	-	504	4	NNC	ENSG00000007923.17	novel	1357	8	NA	NA	48	-1716	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	414.971752720056	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTGTTGAATAGAACAC	NA	False	NA	2	True	ATTAAA	-22	NA	6701876	6672176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_6672329_6678393_6678468_6680907_6681038_6701728
transcript_122805.nnic	chr6	+	659	5	NNC	ENSG00000231889.8	novel	609	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.58602010819715	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	7	True	NA	NA	False	ATTAAA	-16	NA	111483498	111503608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_111483666_111484117_111484146_111484743_111484862_111486299_111486333_111503295
transcript_122807.nnic	chr6	+	738	5	NNC	ENSG00000231889.8	novel	609	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.06155281280883	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	7	True	NA	NA	False	ATTAAA	-16	NA	111483498	111503608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_111483666_111484117_111484146_111484743_111484862_111497867_111497980_111503295
transcript_12281.known	chr1	+	2869	6	FSM	ENSG00000116161.18	ENST00000367679.7	2869	6	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_4	104.535926838575	9828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGCCGAGGGACGAGA	-16	True	NA	NA	False	NA	NA	NA	174999946	175012027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_12282.known	chr1	+	2835	6	FSM	ENSG00000116161.18	ENST00000613570.4	2835	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1232.48454757048	4670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGTATAAAAACAA	6610	False	NA	NA	False	AATAAA	-24	NA	174999162	175011715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174999690_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_122820.known	chr6	+	609	4	FSM	ENSG00000231889.8	ENST00000525151.5	609	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.4558441227157	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	24	False	NA	NA	False	ATTAAA	-16	NA	111483515	111503608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111484117_111484146_111484743_111484862_111503295
transcript_122830.nnic	chr6	+	940	4	FSM	ENSG00000231889.8	ENST00000687951.1	886	4	-54	0	-14	0	multi-exon	FALSE	canonical	3	11	junction_3	18.9795211273157	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTTTGACCTAGTAATT	-10	True	NA	NA	False	TTTAAA	-7	NA	111483481	111598302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111574620_111574803_111576361_111576471_111597837
transcript_122831.nnic	chr6	+	1421	4	FSM	ENSG00000231889.8	ENST00000687951.1	886	4	-54	-481	-14	481	multi-exon	FALSE	canonical	3	11	junction_3	18.9795211273157	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCCACTAGTGATTCTGA	-10	True	NA	NA	False	GATAAA	-15	NA	111483481	111598783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111574620_111574803_111576361_111576471_111597837
transcript_122833.known	chr6	+	784	4	FSM	ENSG00000231889.8	ENST00000438298.7	1093	4	25	284	7	-12	multi-exon	FALSE	canonical	2	10	junction_2	19.0262975904404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTATTTCTTAAAAAAA	11	True	NA	NA	False	ACTAAA	-14	NA	111483561	111576741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111484743_111484862_111574620_111574803_111576361
transcript_122847.nnic	chr6	+	628	3	NNC	ENSG00000231889.8	novel	609	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	319	False	NA	NA	False	ATTAAA	-16	NA	111483458	111503608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_111483666_111490967_111491076_111503295
transcript_122848.known	chr6	+	1106	3	FSM	ENSG00000231889.8	ENST00000449449.7	2171	3	45	1020	4	135	multi-exon	FALSE	canonical	3	46	junction_1	4.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTCCAAGAAAAACTC	-10	True	NA	NA	False	NA	NA	NA	111483540	111577160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111574620_111574803_111576361
transcript_122851.nnic	chr6	+	492	3	NNC	ENSG00000231889.8	novel	915	3	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	19	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	145	False	NA	NA	False	ATTAAA	-16	NA	111483735	111503608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_111483797_111484743_111484862_111503295
transcript_122855.known	chr6	+	324	2	FSM	ENSG00000231889.8	ENST00000420651.3	442	2	21	97	3	-97	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTTATTTGCATA	7	True	NA	NA	False	NA	NA	NA	111483557	111503511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111503295
transcript_122856.known	chr6	+	576	2	FSM	ENSG00000231889.8	ENST00000532353.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTTTGACCTAGTAATT	4	True	NA	NA	False	TTTAAA	-7	NA	111483554	111598302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111597837
transcript_122857.known	chr6	-	2785	10	FSM	ENSG00000056972.20	ENST00000340026.10	2785	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	25.4795972602239	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-9	True	NA	-4	True	AATAAA	-19	NA	111606278	111558939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111601195_111601307_111605775
transcript_122860.known	chr6	-	2264	9	FSM	ENSG00000056972.20	ENST00000359831.8	2264	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.7194469312642	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	19	True	NA	-4	True	AATAAA	-19	NA	111605871	111558939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566558_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
transcript_122861.known	chr6	-	3234	14	FSM	ENSG00000010810.17	ENST00000368682.7	3234	14	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	94.5419352181502	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	607	False	NA	2	True	ATTAAA	-23	NA	111873067	111660331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111699514_111699671_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
transcript_122862.known	chr6	-	3628	14	FSM	ENSG00000010810.17	ENST00000354650.7	3628	14	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_6	76.1878711867993	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTGTTTATTTGT	-13	True	NA	2	True	ATTAAA	-23	NA	111873452	111660331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_111661948_111674498_111674631_111694374_111694529_111694627_111694705_111696276_111696457_111700103_111700269_111702884_111703035_111703998_111704103_111707921_111708021_111714346_111714444_111719804_111720063_111780565_111780636_111846588_111846630_111872967
transcript_122863.known	chr6	-	1115	4	FSM	ENSG00000227012.3	ENST00000653948.1	1115	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCATTCAGCAATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	111909395	111900305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_111901142_111901742_111901851_111908925_111909034_111909332
transcript_122870.known	chr6	-	2225	12	FSM	ENSG00000074935.14	ENST00000368662.10	2225	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	28.3621794497619	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTTCTAGCCTTAAC	17	True	NA	-5	True	AATAAA	-28	NA	112087482	112070662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_122892.nic	chr6	-	815	7	ISM	ENSG00000074935.14	ENST00000605457.5	1645	12	-58	4947	-38	159	5prime_fragment	FALSE	canonical	3	90	junction_1	20.7498326633146	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTATGTATGTGT	NA	False	NA	-10	True	AATAAA	-16	NA	112087567	112076275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_122894.nic	chr6	-	757	6	ISM	ENSG00000074935.14	ENST00000604743.5	959	8	-69	1566	-38	159	5prime_fragment	FALSE	canonical	3	29	junction_3	45.9939126406963	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTATGTATGTGT	NA	False	NA	-10	True	AATAAA	-16	NA	112087567	112076275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_122896.known	chr6	-	547	4	FSM	ENSG00000074935.14	ENST00000603621.1	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	14.3372087784044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACGTACTAGTACAGTT	1	True	NA	NA	False	GATAAA	-38	NA	112087498	112083915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112084247_112086555_112086609_112087232_112087307_112087409
transcript_122899.known	chr6	-	1645	12	FSM	ENSG00000074935.14	ENST00000605457.5	1645	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	40.7215905127034	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTTTTCATATTATC	-10	True	NA	NA	False	NA	NA	NA	112087509	112071328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076172_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_122900.known	chr6	-	726	6	FSM	ENSG00000074935.14	ENST00000368657.7	726	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	13.9283882771841	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGAACTATACTGGAAAA	20	True	NA	NA	False	NA	NA	NA	112087479	112079399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_122902.known	chr6	+	598	4	FSM	ENSG00000203778.8	ENST00000604268.1	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.9556837726075	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	9	True	NA	20	True	AATAAA	-28	NA	112087637	112100895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_112087710_112097040_112097202_112099269_112099409_112100669
transcript_122905.nnic	chr6	+	803	3	NIC	ENSG00000203778.8	novel	2551	4	NA	NA	-308	0	intron_retention	FALSE	canonical	3	8	junction_1	84.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	NA	False	NA	20	True	AATAAA	-28	NA	112087282	112100895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_112087721_112099269_112099409_112100669
transcript_122906.known	chr6	-	619	2	FSM	ENSG00000112769.20	ENST00000368638.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATGTTGAGAGTTGAA	-2	True	NA	NA	False	AATAAA	-23	NA	112254567	112253781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112254292_112254458
transcript_122907.known	chr6	-	645	2	FSM	ENSG00000112769.20	ENST00000453937.2	645	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGATGTTGAGAGTTG	172	False	NA	NA	False	AATAAA	-21	NA	112254578	112253783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112254292_112254441
transcript_122908.known	chr6	+	4296	2	FSM	ENSG00000277443.3	ENST00000612661.2	4296	2	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_1	0	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCTAAAATAGGATTTT	-26	True	NA	21	True	AATAAA	-24	NA	113857344	113863475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113857848_113859682
transcript_12293.known	chr1	+	1059	6	FSM	ENSG00000116161.18	ENST00000405362.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	1242.45167310443	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAAAGTCGTTTTGGG	79	False	NA	NA	False	NA	NA	NA	175000212	175010079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_175000600_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_122954.known	chr6	+	2016	10	FSM	ENSG00000228624.8	ENST00000519104.5	2016	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.71404520791032	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTGATATTCATATT	NA	False	NA	NA	False	AATAAA	-19	NA	113969700	114340738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113970279_113991892_113992019_113993342_113993488_113995599_113996061_114088936_114089020_114116117_114116181_114178652_114178721_114179024_114179158_114235629_114235772_114340521
transcript_122955.known	chr6	+	591	4	FSM	ENSG00000228624.8	ENST00000436876.6	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.89897948556636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGATCAGAGTCATCT	-10	True	NA	NA	False	TTTAAA	-16	NA	113970105	113995644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113970279_113991892_113992121_113993342_113993488_113995599
transcript_122957.known	chr6	+	563	4	FSM	ENSG00000228624.8	ENST00000449620.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTTTTATGAGCAT	6	True	NA	-11	True	AGTAAA	-4	NA	113970234	113995802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113970324_113991892_113992019_113993342_113993488_113995599
transcript_12297.known	chr1	+	804	5	FSM	ENSG00000116161.18	ENST00000473925.1	804	5	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_4	97.5320460156558	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATTTTTAATAGTTT	-8	True	NA	NA	False	TTTAAA	-24	NA	174999954	175008754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608
transcript_122991.known	chr6	+	850	2	FSM	ENSG00000228624.8	ENST00000517965.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTGCAGCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	114448959	114456634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_114449032_114455856
transcript_123017.known	chr6	-	2000	14	FSM	ENSG00000196591.12	ENST00000519108.5	2000	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	854.106959475716	7061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	636	False	NA	24	True	ATTAAA	-14	NA	113970724	113940717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970479
transcript_123020.known	chr6	-	2084	15	FSM	ENSG00000196591.12	ENST00000368632.6	2084	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	1100.97879690051	9444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	0	True	NA	24	True	ATTAAA	-14	NA	113971157	113940717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113962366_113962395_113970856
transcript_123025.known	chr6	+	6919	12	FSM	ENSG00000178425.14	ENST00000319550.9	6919	12	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_6	43.8360959231673	1088	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTCTCTAGACAT	0	True	NA	22	True	ATTAAA	-15	NA	116100852	116249497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116221053_116221229_116223033_116223132_116236965_116237085_116238186_116238349_116238954_116239124_116243908
transcript_123027.nnic	chr6	-	2523	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-44	0	multi-exon	FALSE	canonical	3	42	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-1	True	NA	-4	True	AATAAA	-15	NA	116254119	116249963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_-_116250419_116252051
transcript_123028.nnic	chr6	-	2420	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-20	0	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-6	True	NA	-4	True	AATAAA	-15	NA	116254095	116249963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_-_116250419_116252130
transcript_123030.known	chr6	-	4112	1	FSM	ENSG00000187189.11	ENST00000420283.3	4112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	14	True	NA	-4	True	AATAAA	-15	NA	116254075	116249963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_116250000_116254100
transcript_123031.known	chr6	+	514	4	FSM	ENSG00000111817.19	ENST00000453463.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTGTGATTAAAATCTG	45	False	NA	NA	False	ATTAAA	-15	NA	116280217	116370273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116280261_116367008_116367218_116369824_116369928_116370114
transcript_123036.known	chr6	+	3713	2	FSM	ENSG00000111817.19	ENST00000606712.1	3713	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTCTAGTATTCTTC	NA	False	NA	24	True	AATAAA	-14	NA	116432528	116438277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116433551_116435586
transcript_123038.known	chr6	-	5073	1	FSM	ENSG00000189241.8	ENST00000368608.4	5073	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGAAGCTTCTTGTG	-18	True	NA	NA	False	ATTAAA	-16	NA	116279930	116274857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_116274900_116279900
transcript_123039.known	chr6	+	1127	3	FSM	ENSG00000188820.13	ENST00000368605.3	1127	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGAGTGCTTTTTTTC	-1	True	NA	4	True	AATAAA	-9	NA	116461374	116463771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116461430_116461871_116462455_116463282
transcript_123040.known	chr6	+	9787	2	FSM	ENSG00000178033.6	ENST00000368599.4	9787	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATTTTCCTTTCTGTGCT	1	True	NA	NA	False	AATAAA	-20	NA	116511638	116524788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116512237_116515599
transcript_123047.known	chr6	+	1427	8	FSM	ENSG00000111832.13	ENST00000487832.6	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	260.055724012829	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTAGCCTTCCTTTTAG	-28	True	NA	NA	False	GATAAA	-35	NA	116571488	116593588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_123051.known	chr6	+	857	7	FSM	ENSG00000111832.13	ENST00000368590.9	857	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	307.743760655228	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGAATTTCTTAAATTG	-1	True	NA	NA	False	NA	NA	NA	116571408	116590298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116571656_116572857_116572986_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271
transcript_123056.known	chr6	+	2840	6	FSM	ENSG00000111834.13	ENST00000229554.10	2840	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	2.33238075793812	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTGGACTGTGATAT	-22	True	NA	NA	False	NA	NA	NA	116616478	116632985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116617310_116622767_116623003_116627628_116628370_116629566_116629703_116630434_116630553_116632206
transcript_123063.nic	chr6	-	1911	10	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	43.9621048934951	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-21	True	NA	-1	True	AATAAA	-22	NA	116668805	116635617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116666913_116668565
transcript_123066.known	chr6	-	2167	10	FSM	ENSG00000153975.10	ENST00000368576.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	14.1220430096156	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	18	True	NA	-1	True	AATAAA	-22	NA	116668766	116635617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116667208_116668565
transcript_123072.nnic	chr6	-	1625	9	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_8	48.9309143078279	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-14	True	NA	-1	True	AATAAA	-22	NA	116668798	116635617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116668565
transcript_123082.known	chr6	+	2150	15	FSM	ENSG00000196911.11	ENST00000356348.6	2150	15	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_14	23.9310233285378	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTTTTATGCTTTTT	4	True	NA	2	True	AATAAA	-17	NA	116681210	116741866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
transcript_123084.known	chr6	+	11288	14	FSM	ENSG00000196911.11	ENST00000368564.7	11288	14	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_4	17.2290521122432	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTATGCTTTTTA	4	True	NA	3	True	AATAAA	-18	NA	116681210	116741867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135
transcript_123087.nnic	chr6	+	336	3	NNC	ENSG00000196911.11	novel	689	6	NA	NA	-1	-9356	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAACAGGTAGGTGTT	-21	True	NA	NA	False	AATACA	-18	NA	116681185	116689442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_116681339_116681492_116681553_116689319
transcript_123089.known	chr6	+	689	6	FSM	ENSG00000196911.11	ENST00000413340.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	35.6561355169065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTAAAGTTTTCTTT	-20	True	NA	NA	False	AAGAAA	-20	NA	116681186	116698798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116681339_116681446_116681553_116689319_116689454_116692054_116692157_116692292_116692393_116698703
transcript_123091.nic	chr6	+	367	2	ISM	ENSG00000196911.11	ENST00000356348.6	2150	15	-116	52424	-92	-9356	5prime_fragment	FALSE	canonical	3	93	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAACAGGTAGGTGTT	NA	False	NA	NA	False	AATACA	-18	NA	116681094	116689442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_116681339_116689319
transcript_123092.nic	chr6	+	1498	2	ISM	ENSG00000196911.11	ENST00000356348.6	2150	15	-30	51207	-6	-8139	5prime_fragment	FALSE	canonical	3	93	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAACGATATTTATTTAG	-26	True	NA	NA	False	NA	NA	NA	116681180	116690659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_116681339_116689319
transcript_123094.nic	chr6	-	794	3	ISM	ENSG00000183807.8	ENST00000368557.6	1032	4	387	0	387	0	3prime_fragment	FALSE	canonical	3	39	junction_1	1	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTTGTGTGTGTGGATT	500	False	NA	-3	True	TATAAA	-16	NA	116765332	116752196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_116752696_116761976_116762086_116765146
transcript_123099.known	chr6	+	3476	19	FSM	ENSG00000185002.10	ENST00000332958.3	3476	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.49897084035912	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTAAAGGCTTGGTGC	-16	True	NA	NA	False	AATAAA	-19	NA	116877241	116932161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116877499_116877795_116877953_116880543_116880668_116882366_116882429_116893986_116894065_116895179_116895208_116910934_116911043_116916007_116916086_116916200_116916315_116918036_116918087_116919136_116919297_116920309_116920455_116922041_116922152_116923106_116923225_116924668_116924792_116925452_116925660_116927026_116927540_116928758_116928972_116931330
transcript_123102.known	chr6	-	4590	8	FSM	ENSG00000047932.14	ENST00000052569.10	4590	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_6	19.4820692024272	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	13	False	NA	-3	True	AATAAA	-24	NA	117602528	117560268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117578899_117579065_117602003
transcript_123105.nic	chr6	-	746	3	ISM	ENSG00000047932.14	ENST00000052569.10	4590	8	-22	15050	-8	-15047	5prime_fragment	FALSE	canonical	3	122	junction_1	16.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAGCACAACTTGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	117602550	117575318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_117575353_117578899_117579065_117602003
transcript_123106.known	chr6	-	4460	8	FSM	ENSG00000047932.14	ENST00000535237.2	4460	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	78.7286738211222	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTTGGCTTGTTATT	-1	True	NA	-6	True	AATAAA	-21	NA	117602542	117560271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_117563385_117566853_117567035_117570859_117570956_117573466_117573633_117575176_117575353_117577447_117577472_117578899_117579065_117602003
transcript_123110.nnic	chr6	-	1229	4	NNC	ENSG00000289372.1	novel	572	2	NA	NA	0	65199	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	9.03081145609604	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTAAGCCTCATGTTT	-15	True	NA	NA	False	ATTAAA	-17	NA	117675332	117608547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_117609147_117662905_117663067_117664629_117664863_117675096
transcript_123112.nnic	chr6	-	1004	4	NNC	ENSG00000289372.1	novel	572	2	NA	NA	56	65030	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	9.03081145609604	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTG	-3	True	NA	NA	False	NA	NA	NA	117675276	117608716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_117609147_117662905_117663067_117664629_117664863_117675096
transcript_123115.nnic	chr6	+	2092	5	NNC	ENSG00000153989.8	novel	4796	5	NA	NA	2	-2139	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	142.720881443466	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGTCCAGTGACATTAC	3	True	NA	NA	False	AATAAA	-16	NA	117675470	117708588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_117675523_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_123119.known	chr6	+	4796	5	FSM	ENSG00000153989.8	ENST00000368494.4	4796	5	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	12.1860576069539	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTCCACATTCAGTTA	1	True	NA	NA	False	AATAAA	-14	NA	117675468	117710727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_117676086_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_12312.known	chr1	-	910	3	FSM	ENSG00000120333.4	ENST00000367677.3	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	469	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCCCCTTAACTATT	9	True	NA	NA	False	NA	NA	NA	175023415	175014244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175014852_175018417_175018577_175023271
transcript_123120.nnic	chr6	+	613	2	Genic_Genomic	ENSG00000230202.1	novel	474	1	NA	NA	-48	132	multi-exon	FALSE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATACCTAAAATCAGA	-12	True	NA	NA	False	AATAAA	-24	NA	117998926	117999580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_+_117999033_117999073
transcript_123121.known	chr6	+	474	1	FSM	ENSG00000230202.1	ENST00000443998.1	474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	585	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTCTGCCAACATGAGG	13	False	NA	NA	False	NA	NA	NA	117998974	117999448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_117999000_117999400
transcript_123122.nic	chr6	-	2510	12	NIC	ENSG00000111860.14	novel	7373	13	NA	NA	-54	-4432	combination_of_known_junctions	TRUE	canonical	3	19	junction_7	5.74096487412616	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATTACCTTTGGAAAAT	-2	True	NA	NA	False	AAAAAG	-9	NA	118574122	118465212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_118465569_118469071_118469304_118470536_118470645_118479870_118479922_118480395_118480514_118481778_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118573990
transcript_123124.nic	chr6	-	1719	7	NIC	ENSG00000111860.14	novel	1797	9	NA	NA	-152	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	6.22941053034359	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTAGTAACTACCGTTC	NA	False	NA	NA	False	GATAAA	-36	NA	118574220	118481802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118573990
transcript_123128.known	chr6	-	836	2	FSM	ENSG00000111860.14	ENST00000472713.1	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCGACAAGGAAGTGAAAC	-4	True	NA	NA	False	NA	NA	NA	118574068	118565558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_118566317_118573990
transcript_123129.nnic	chr6	+	993	3	NNC	ENSG00000286339.1	novel	906	3	NA	NA	8525	1996	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	28	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTGAGTGCTAGTT	NA	False	NA	11	True	AGTAAA	-19	NA	118574184	118578836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_118574700_118576250_118576476_118578583
transcript_123130.nnic	chr6	+	1310	3	NNC	ENSG00000286339.1	novel	906	3	NA	NA	8525	5458	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	24.5	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTGATGACTCCGATAA	NA	False	NA	3	True	AATAAA	-17	NA	118574184	118582298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_118574700_118576250_118576476_118581728
transcript_123131.nic	chr6	+	1105	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8525	0	8525	0	3prime_fragment	FALSE	canonical	3	57	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGGTACCAAGATGCAAAT	NA	False	NA	26	True	ATTAAA	-29	NA	118574184	118576840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_118574700_118576250
transcript_123132.nic	chr6	+	1838	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8525	-733	8525	733	3prime_fragment	FALSE	canonical	3	57	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACAGCAGTTTGTCAGTT	NA	False	NA	NA	False	TATAAA	-37	NA	118574184	118577573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_118574700_118576250
transcript_123133.nic	chr6	+	2942	2	ISM	ENSG00000286339.1	ENST00000659521.1	906	3	8683	-1995	8683	1995	3prime_fragment	FALSE	canonical	3	57	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGCCTGAGTGCTAGT	43	False	NA	10	True	AGTAAA	-18	NA	118574342	118578835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_118574700_118576250
transcript_123135.nic	chr6	-	2482	8	ISM	ENSG00000111877.18	ENST00000619706.5	5219	14	139	97142	4	0	5prime_fragment	FALSE	canonical	3	32	junction_6	10.40211909337	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	138	False	NA	-2	True	AATAAA	-17	NA	118935020	118910596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118932606_118932741_118934890
transcript_123136.known	chr6	-	2442	7	FSM	ENSG00000111877.18	ENST00000316068.7	2442	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	13.9453297638393	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	44	False	NA	-2	True	AATAAA	-17	NA	118935114	118910596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
transcript_123141.known	chr6	+	2434	4	FSM	ENSG00000111875.8	ENST00000229595.6	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	779	junction_3	78.8542960148653	1159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCAGTGGTTAATATAA	-34	True	NA	-63	True	AATAAA	-20	NA	118894151	118909171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_118894523_118900765_118900882_118905651_118905829_118907401
transcript_123142.nnic	chr6	+	1499	3	NNC	ENSG00000253194.2	novel	1812	5	NA	NA	143099	-72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCATCTGCAATCTGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	119077868	119182673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_119078084_119179856_119179936_119181468
transcript_12315.known	chr1	-	1271	1	FSM	ENSG00000287697.1	ENST00000670650.1	1271	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCTAATGCAGTGAACAGT	16	True	NA	NA	False	AATAAA	-16	NA	174999623	174998352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_174998400_174999600
transcript_123155.known	chr6	-	542	3	FSM	ENSG00000111879.20	ENST00000448815.2	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_2	24	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTGAATTTTTCATG	4238	False	NA	0	True	AATAAA	-20	NA	119020066	119011176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_119011432_119016746_119016945_119019977
transcript_123156.known	chr6	-	5018	13	FSM	ENSG00000111885.7	ENST00000368468.4	5018	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	10.3235841106124	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTATATTTTTCT	5	True	NA	NA	False	AATAAA	-18	NA	119349761	119177204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_119179946_119180311_119180428_119188404_119188578_119189663_119189884_119193776_119193893_119201253_119201348_119204758_119204883_119248259_119248355_119290682_119290764_119301987_119302104_119306895_119306993_119348462_119349288_119349541
transcript_12316.known	chr1	-	2115	3	FSM	ENSG00000120333.4	ENST00000476371.1	2115	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_2	18	2754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGGTATTATTAAGAG	-1	True	NA	0	True	ATTAAA	-14	NA	175023425	175012957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175014852_175018417_175018577_175023363
transcript_123162.known	chr6	-	5101	32	FSM	ENSG00000146350.14	ENST00000398212.7	5101	32	0	0	0	0	multi-exon	TRUE	non_canonical	1	2	junction_10	5.56598858498648	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTTTTTTTTTCGTTT	1	True	NA	0	True	ATTAAA	-17	NA	121334480	121079493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_121080891_121090852_121091042_121106022_121106164_121112504_121112660_121113061_121113178_121115171_121115242_121126377_121126462_121131626_121131753_121160009_121160104_121160947_121161057_121205074_121205164_121223235_121223353_121239069_121239189_121241464_121241553_121242200_121242340_121255327_121255411_121256083_121256286_121279120_121279246_121281543_121281687_121283817_121283911_121292052_121292194_121294569_121294661_121299445_121299506_121303616_121303762_121304364_121304427_121304521_121304626_121304754_121304834_121307975_121308102_121310778_121310848_121317494_121317673_121321632_121321795_121334275
transcript_123164.known	chr6	+	3083	2	FSM	ENSG00000152661.9	ENST00000282561.4	3083	2	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_1	0	6021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTATATTCCGTGTGAT	3	True	NA	20	True	AATAAA	-23	NA	121435645	121449727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_121435833_121446831
transcript_123165.known	chr6	+	2908	2	FSM	ENSG00000152661.9	ENST00000650427.1	2908	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAATTTAGTATAAACA	2	False	NA	-2	True	AATAAA	-1	NA	121437381	121449705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_121437416_121446831
transcript_123168.known	chr6	+	2596	13	FSM	ENSG00000025156.13	ENST00000368455.9	2596	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	43.4040288708574	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	-2	True	NA	NA	False	AATATA	-11	NA	122399651	122433119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122427902_122427957_122431429_122431515_122431924
transcript_12317.known	chr1	-	4548	4	FSM	ENSG00000235750.10	ENST00000423313.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	8.9566858950296	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTCTGCCATATTTCT	5	True	NA	-2	True	AATAAA	-21	NA	175192776	175156985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192639
transcript_123170.known	chr6	+	2643	12	FSM	ENSG00000025156.13	ENST00000452194.5	2643	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	24.769015568476	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	-2	True	NA	NA	False	AATATA	-11	NA	122399550	122433119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122431429_122431515_122431924
transcript_123173.nic	chr6	+	1064	7	ISM	ENSG00000025156.13	ENST00000452194.5	2643	12	-8	12709	-8	-11582	5prime_fragment	TRUE	canonical	3	131	junction_3	14.2214626533279	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTCCAGTTGCCTGTTT	-10	True	NA	NA	False	AATAAA	-15	NA	122399542	122420410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134
transcript_123175.nic	chr6	+	635	3	ISM	ENSG00000025156.13	ENST00000368455.9	2596	13	-35	20171	-35	-19044	5prime_fragment	FALSE	canonical	3	153	junction_2	11.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTTCCTGCTAGAATA	37	False	NA	NA	False	AAAAAG	-1	NA	122399616	122412948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_122399831_122412372_122412482_122412636
transcript_123176.nic	chr6	+	778	2	ISM	ENSG00000025156.13	ENST00000368455.9	2596	13	-24	20172	-24	-19045	intron_retention	FALSE	canonical	3	176	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTCCTGCTAGAAT	-26	True	NA	NA	False	NA	NA	NA	122399627	122412947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_122399831_122412372
transcript_123177.known	chr6	-	3125	10	FSM	ENSG00000111897.7	ENST00000339697.5	3125	10	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_6	49.9461438346407	861	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGTGTACTGATTAT	-8	True	NA	-4	True	AATAAA	-15	NA	122471807	122443350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
transcript_12318.known	chr1	-	4494	4	FSM	ENSG00000235750.10	ENST00000444639.5	4494	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	25.0377492776186	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGTCTGCCATATTTC	-8	True	NA	-3	True	AATAAA	-20	NA	175192943	175156986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192859
transcript_123210.known	chr6	+	1706	5	FSM	ENSG00000135549.15	ENST00000368452.7	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	186.336221653226	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTCTCCTTCATTTTA	3	True	NA	20	True	AATAAA	-32	NA	122610404	122726373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122610536_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_123219.nnic	chr6	+	625	3	NNC	ENSG00000135549.15	novel	394	4	NA	NA	-46	2547	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	184.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGTTTTCTGGTATT	NA	False	NA	NA	False	TATAAA	-15	NA	122482032	122588671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_122482267_122585920_122586008_122588367
transcript_123220.nnic	chr6	+	438	2	NIC	ENSG00000279114.1	novel	6430	2	NA	NA	10110	101963	combination_of_known_splicesites	FALSE	canonical	3	381	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTGTGAAATCTTGC	NA	False	NA	NA	False	AATAAA	-39	NA	122482032	122586124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_122482267_122585920
transcript_123223.known	chr6	+	785	4	FSM	ENSG00000164434.12	ENST00000368444.8	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	19.5106808355492	2129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTTGTTTCTAATA	-3	True	NA	6	True	AATAAA	-17	NA	122779715	122784074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122779868_122780290_122780464_122781092_122781195_122783716
transcript_123226.nnic	chr6	+	1755	8	NNC	ENSG00000172594.13	novel	1755	7	NA	NA	425	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.31095470674304	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAGTTTTCTTAAC	389	False	NA	10	True	AATAAA	-21	NA	122789716	122809720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_122789910_122795676_122795891_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_123227.known	chr6	+	1755	7	FSM	ENSG00000172594.13	ENST00000539041.5	1755	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATGAAGTTTTCTT	246	False	NA	7	True	AATAAA	-18	NA	122789048	122809717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122789459_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_12323.known	chr1	-	2485	3	FSM	ENSG00000235750.10	ENST00000545251.6	2485	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	17	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCACTTGGGCTGCTT	2	True	NA	NA	False	ATTAAA	-17	NA	175192754	175158952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175161147_175166561_175166738_175192639
transcript_123233.known	chr6	-	1661	9	FSM	ENSG00000186439.14	ENST00000628709.2	1661	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	104.236434968777	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTCTTTAAGTCTTCA	0	True	NA	NA	False	AATAAA	-19	NA	123636909	123464249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_123464984_123503718_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123636753
transcript_123238.known	chr6	-	1179	8	FSM	ENSG00000186439.14	ENST00000546248.5	1179	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	90.3641160493907	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAGTTGAAAAAGAC	214	False	NA	74	True	NA	NA	NA	123637093	123503650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_123503902_123512302_123512363_123516140_123516207_123530505_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123636753
transcript_12327.nic	chr1	-	1184	2	ISM	ENSG00000235750.10	ENST00000567124.5	581	5	-50	15660	-49	-15643	5prime_fragment	FALSE	canonical	3	48	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	256	False	NA	NA	False	AAGAAA	-29	NA	175192825	175176686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_175177685_175192639
transcript_123272.nnic	chr6	+	1356	3	NNC	ENSG00000285941.1	novel	1362	10	NA	NA	-4646	-29071	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGATAATGCAAAAAG	NA	False	NA	NA	False	NA	NA	NA	123585064	123656252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_123585638_123610315_123610505_123655658
transcript_123276.known	chr6	-	1598	3	FSM	ENSG00000236548.3	ENST00000664931.2	1632	3	0	34	0	-7	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATATTGAAACCTCT	399	False	NA	NA	False	AATGAA	-34	NA	124963145	124940417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_124941525_124947930_124948099_124962822
transcript_123282.known	chr6	+	1468	8	FSM	ENSG00000111907.21	ENST00000304877.17	1468	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.7949815095098	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	NA	False	NA	17	True	ATTAAA	-18	NA	125153648	125263497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125252021_125252037_125253716_125253756_125257097_125257159_125262833
transcript_123284.known	chr6	+	2239	7	FSM	ENSG00000111907.21	ENST00000534000.6	2239	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	34.5964834436488	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGCATGACAATCT	22	True	NA	NA	False	AGTAAA	-26	NA	125153772	125264407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125257097_125257159_125262833
transcript_123285.known	chr6	+	789	7	FSM	ENSG00000111907.21	ENST00000528193.5	789	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	57.2967421994189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGCCTTGACATTGTTA	27	False	NA	NA	False	NA	NA	NA	125153899	125263062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125257097_125257181_125262833
transcript_123286.known	chr6	+	1022	7	FSM	ENSG00000111907.21	ENST00000532429.5	1022	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50.9991829999919	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCCGCTGGGAAAAACC	255	False	NA	NA	False	NA	NA	NA	125154188	125263044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125154533_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125257097_125257159_125262833
transcript_123287.known	chr6	+	1308	6	FSM	ENSG00000111907.21	ENST00000368402.9	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	56.577734136319	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	-18	True	NA	17	True	ATTAAA	-18	NA	125153732	125263497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125262833
transcript_123288.known	chr6	+	999	6	FSM	ENSG00000111907.21	ENST00000527711.5	999	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	58.7312523278705	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGTCTGTGTAATTCG	42	False	NA	NA	False	TTTAAA	-36	NA	125153792	125263226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125257097_125257159_125262833
transcript_123290.known	chr6	+	2147	5	FSM	ENSG00000111907.21	ENST00000368388.6	2147	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	50.2810849127184	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGCATGACAATCT	14	True	NA	NA	False	AGTAAA	-26	NA	125153764	125264407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125262833
transcript_123291.known	chr6	+	811	5	FSM	ENSG00000111907.21	ENST00000534199.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	66.8744158852995	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGATGATGGACCAC	128	False	NA	NA	False	NA	NA	NA	125154380	125263125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125154533_125220077_125220194_125229117_125229267_125248281_125248384_125262833
transcript_123292.known	chr6	+	581	4	FSM	ENSG00000111907.21	ENST00000392483.6	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	8.04155872120988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTTATTTTAATGGA	-24	True	NA	NA	False	NA	NA	NA	125153848	125248475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281
transcript_123314.known	chr6	-	1350	5	FSM	ENSG00000111906.18	ENST00000318787.13	1350	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_3	237.518815044198	2081	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCTGCCTTTACATT	-31	True	NA	NA	False	GATAAA	-7	NA	125301974	125275349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125300537_125300660_125301848
transcript_123318.nnic	chr6	-	608	6	NNC	ENSG00000237742.8	novel	528	5	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.9986666074021	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-4	True	NA	-1	True	AATAAA	-21	NA	125745625	125578557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125712943_125713028_125720423_125720508_125744901_125745066_125745584
transcript_123324.known	chr6	-	707	5	FSM	ENSG00000237742.8	ENST00000451660.6	707	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.2704780540755	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGCCACATAGTTATCA	NA	False	NA	-10	True	AATAAA	-12	NA	125749186	125578566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125578726_125645633_125645701_125657428_125657467_125720423_125720508_125748827
transcript_123326.known	chr6	-	509	5	FSM	ENSG00000237742.8	ENST00000606334.6	528	5	15	4	15	-4	multi-exon	FALSE	canonical	3	19	junction_4	6.80073525436772	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-1	True	NA	-1	True	AATAAA	-21	NA	125745610	125578557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125578726_125645633_125645701_125720423_125720508_125744901_125745066_125745584
transcript_123329.nnic	chr6	-	587	4	NNC	ENSG00000237742.8	novel	475	5	NA	NA	37549	-4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	16.0485374896143	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	NA	False	NA	-1	True	AATAAA	-21	NA	125707479	125578557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125657428_125657467_125707165
transcript_123332.known	chr6	-	1685	4	FSM	ENSG00000237742.8	ENST00000656901.1	1685	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.9652400197707	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTAAACTTCCCCATTG	NA	False	NA	NA	False	ATTAAA	-20	NA	125749180	125577544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125578726_125645633_125645701_125720423_125720508_125748827
transcript_123333.nnic	chr6	-	499	4	NIC	ENSG00000237742.8	novel	528	5	NA	NA	-59	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	15.5134350376268	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	NA	False	NA	-1	True	AATAAA	-21	NA	125745684	125578557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_125578726_125645633_125645701_125744901_125745066_125745584
transcript_123338.nnic	chr6	-	1170	3	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	39049	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	1370	False	NA	-1	True	AATAAA	-21	NA	125705979	125578557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125705044
transcript_123339.nnic	chr6	-	681	3	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	37417	-4	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	11.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	NA	False	NA	-1	True	AATAAA	-21	NA	125707611	125578557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125707165
transcript_12334.known	chr1	-	1201	3	FSM	ENSG00000227740.2	ENST00000426575.2	1201	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTATTTGTTGCACTT	NA	False	NA	NA	False	AAAACA	-3	NA	175921057	175904761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175905137_175908546_175908771_175920455
transcript_123340.known	chr6	-	475	5	FSM	ENSG00000237742.8	ENST00000427852.6	475	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	15.0228991875736	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGCCACATAGTTATCA	593	False	NA	-10	True	AATAAA	-12	NA	125745028	125578566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125578726_125645633_125645701_125657428_125657467_125720423_125720508_125744901
transcript_123342.nnic	chr6	+	1344	3	NNC	ENSG00000224506.3	novel	2963	4	NA	NA	3232	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTGATGTGAGTTGAGA	NA	False	NA	NA	False	AATAAA	-20	NA	125704710	125720145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_125705211_125717457_125718185_125720028
transcript_123348.nnic	chr6	-	2291	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_2	13.5	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGACCCCACATAGCCA	NA	False	NA	14	True	AAAACA	-30	NA	125707418	125687840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125689647_125694166_125694399_125707165
transcript_123352.nnic	chr6	-	781	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	9.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	125707419	125701883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125702309_125705044_125705147_125707165
transcript_123357.nnic	chr6	-	2065	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	61	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCACATAGCCAAAGCA	NA	False	NA	19	True	AAAAAG	-5	NA	125707419	125687835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125689647_125707165
transcript_12336.known	chr1	-	2826	20	FSM	ENSG00000143207.21	ENST00000367669.8	2826	20	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_16	81.2559650484546	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	-26	True	NA	-4	True	AATAAA	-38	NA	176207286	175944830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176043185_176043268_176043709_176043819_176046180_176046325_176081151_176081288_176085775_176085891_176116623_176116682_176135009_176135087_176136487_176136548_176149005_176149075_176162868_176162989_176163814_176163892_176175909_176176008_176184632_176184693_176206571
transcript_123361.nnic	chr6	-	871	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	39	junction_1	0	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	125707611	125701883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125702309_125707165
transcript_123363.known	chr6	+	2626	5	FSM	ENSG00000135547.9	ENST00000368364.4	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	13.4420050587701	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATGTGGATGAGTTG	-8	True	NA	6	True	ATTAAA	-19	NA	125749631	125761269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125749860_125751800_125751880_125752006_125752091_125754464_125754547_125759116
transcript_123368.nnic	chr6	+	715	3	NNC	ENSG00000111912.20	novel	5521	17	NA	NA	-208	-66296	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGAGTCCATAGAGAGAA	NA	False	NA	NA	False	AATAAA	-29	NA	125780952	125788944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_125781372_125786136_125786214_125788725
transcript_123369.nic	chr6	+	444	3	ISM	ENSG00000111912.20	ENST00000417494.5	765	6	-43	26025	-43	-62	5prime_fragment	FALSE	canonical	3	16	junction_1	6	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAGTAATCAGTTAA	-8	True	NA	NA	False	AATATA	-20	NA	125790896	125855178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_125791068_125815290_125815405_125855019
transcript_123370.nic	chr6	+	285	2	ISM	ENSG00000111912.20	ENST00000417494.5	765	6	-43	65799	-43	-39836	5prime_fragment	FALSE	canonical	3	16	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCATTCATTTTACAAA	-8	True	NA	NA	False	NA	NA	NA	125790896	125815404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_125791068_125815290
transcript_123373.nnic	chr6	+	871	5	NNC	ENSG00000111911.7	novel	3325	5	NA	NA	-26	-2190	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	14.7817454990945	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGGGAACCTTTATTA	-28	True	NA	NA	False	AATAAA	-16	NA	125956743	125978054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_125956889_125966886_125967005_125972258_125972329_125974846_125974974_125977643
transcript_123375.known	chr6	+	3325	5	FSM	ENSG00000111911.7	ENST00000229633.7	3325	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3.77491721763537	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTCTGGACTTTT	-2	True	NA	19	True	AATAAA	-21	NA	125956769	125980244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125957179_125966886_125967005_125972258_125972329_125974846_125974974_125977643
transcript_12338.nnic	chr1	-	999	7	NNC	ENSG00000143207.21	novel	2034	18	NA	NA	53232	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_6	173.101848632532	132	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	NA	False	NA	-4	True	AATAAA	-38	NA	176028024	175944830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176027931
transcript_123388.known	chr6	+	2093	15	FSM	ENSG00000066651.20	ENST00000479748.5	2093	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	134.305944524782	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	20	True	NA	19	True	AATAAA	-22	NA	125986478	126039276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126008656_126008746_126009334_126009435_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_12339.nnic	chr1	-	928	7	NNC	ENSG00000143207.21	novel	2034	18	NA	NA	53234	0	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_6	175.666982921916	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGCTTGGAAAGTTTTT	NA	False	NA	-4	True	AATAAA	-38	NA	176028022	175944830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_175945171_175947194_175947240_175986942_175987104_175988287_175988413_175989361_175989480_176027571_176027689_176028000
transcript_123396.known	chr6	+	1843	13	FSM	ENSG00000066651.20	ENST00000334379.11	1843	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	34.2031309483016	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	4	True	NA	19	True	AATAAA	-22	NA	125986539	126039276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_123398.nic	chr6	+	2069	13	NIC	ENSG00000066651.20	novel	1843	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	85.8671454437998	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	6	True	NA	19	True	AATAAA	-22	NA	125986464	126039276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_125986774_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_12340.known	chr1	-	450	2	FSM	ENSG00000143207.21	ENST00000482305.1	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGTTTATTGAGCCA	1840	False	NA	-26	True	AATAAA	-16	NA	175947326	175944852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175945171_175947194
transcript_123406.nic	chr6	+	703	7	ISM	ENSG00000066651.20	ENST00000468097.5	1009	11	-87	11749	-40	0	5prime_fragment	FALSE	canonical	3	272	junction_1	36.4116129216429	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGGATGCTGGTTTGTC	-20	True	NA	NA	False	AATACA	-1	NA	125986438	125999525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456
transcript_123413.known	chr6	+	809	3	FSM	ENSG00000203760.9	ENST00000368328.5	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_2	46.5	6776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGTCAAATCTAG	-44	True	NA	86	True	AAGAAA	-2	NA	126340114	126348875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_126340400_126346204_126346319_126348465
transcript_123415.known	chr6	+	528	3	FSM	ENSG00000203760.9	ENST00000368325.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	656	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	15	True	NA	15	True	ATTAAA	-17	NA	126340173	126348608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_126340445_126346204_126346319_126348465
transcript_123416.known	chr6	+	443	3	FSM	ENSG00000203760.9	ENST00000368326.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	724.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	15	True	NA	15	True	ATTAAA	-17	NA	126340173	126348608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_126340400_126346244_126346319_126348465
transcript_123419.known	chr6	+	903	1	FSM	ENSG00000217325.2	ENST00000567272.1	903	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCCCTGTCAAAAAAAAAAAA	NA	False	NA	NA	False	ATTAAA	-13	NA	126643487	126644390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_126643500_126644400
transcript_123425.known	chr6	+	2169	5	FSM	ENSG00000118518.17	ENST00000608991.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	43.6942501938184	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-2	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127266926_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_123427.known	chr6	+	568	5	FSM	ENSG00000118518.17	ENST00000610162.5	568	5	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	49.4286101362359	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAACATGCTTCCTAC	-2	True	NA	NA	False	NA	NA	NA	127266882	127286643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267096_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_123428.known	chr6	+	843	5	FSM	ENSG00000118518.17	ENST00000480444.1	843	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	50.658168146904	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGAGGAAATGGTGAAT	3	True	NA	NA	False	NA	NA	NA	127266887	127286903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267096_127280230_127280341_127282286_127282396_127286049_127286178_127286615
transcript_123430.nic	chr6	+	2388	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	47.2175814713121	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-18	True	NA	29	True	AATAAA	-20	NA	127266833	127288362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_127267096_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_123432.known	chr6	+	762	5	FSM	ENSG00000118518.17	ENST00000477776.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	47.9322438448275	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAGGATTTCCTTGACAAGC	12	True	NA	NA	False	AAGAAA	-5	NA	127266863	127286849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267045_127280230_127280341_127282286_127282396_127286049_127286178_127286615
transcript_123435.known	chr6	+	2267	4	FSM	ENSG00000118518.17	ENST00000356799.6	2267	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	20.5318181259127	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTGAGACTTAAAATTC	-3	True	NA	NA	False	AATAAA	-23	NA	127266848	127288567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127266926_127280230_127280341_127286049_127286178_127286615
transcript_123436.known	chr6	+	884	4	FSM	ENSG00000118518.17	ENST00000476956.5	884	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	15.2534149181967	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGCAGCAAGTAGAG	53	False	NA	NA	False	NA	NA	NA	127266725	127286891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267096_127280230_127280341_127286049_127286178_127286615
transcript_123437.nic	chr6	+	2166	4	NIC	ENSG00000118518.17	novel	762	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	45.2572891612193	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	12	True	NA	29	True	AATAAA	-20	NA	127266863	127288362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_127267045_127280230_127280341_127286049_127286178_127286615
transcript_123439.known	chr6	+	2119	3	FSM	ENSG00000118518.17	ENST00000368314.6	2119	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	2	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCCTGTGAGACTTAA	12	True	NA	NA	False	AATAAA	-18	NA	127266863	127288562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127266926_127280230_127280341_127286615
transcript_123441.known	chr6	+	2070	3	FSM	ENSG00000118518.17	ENST00000610153.1	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	10.5	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	-2	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267096_127280230_127280341_127286615
transcript_123442.known	chr6	+	610	3	FSM	ENSG00000118518.17	ENST00000489534.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	32.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCAGTACGATGAGCGC	-2	True	NA	NA	False	AAGAAA	-6	NA	127266882	127286953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267045_127280230_127280341_127286615
transcript_123445.known	chr6	-	1009	7	FSM	ENSG00000093144.19	ENST00000430841.6	1009	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	308.075026936982	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTTCGTGTGGATGT	211	False	NA	-135	True	AATAAA	-4	NA	127343398	127289868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127331829_127331868_127343335
transcript_123451.known	chr6	-	2585	6	FSM	ENSG00000093144.19	ENST00000531967.5	2585	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	300.799202126601	2976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	734	False	NA	-1	True	AATAAA	-22	NA	127342875	127288711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342355
transcript_123452.known	chr6	-	2443	6	FSM	ENSG00000093144.19	ENST00000474289.6	2443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	297.784754478801	2772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAACATTTTGTGTAA	5	True	NA	-9	True	AATAAA	-14	NA	127343346	127288719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127342960
transcript_12346.known	chr1	-	2921	10	FSM	ENSG00000242193.11	ENST00000476232.6	2921	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.16472842006823	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTATCCTCCTTTCTA	13	True	NA	NA	False	AATAAA	-18	NA	178037950	178006135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_178008150_178022439_178022669_178024403_178024487_178026154_178026256_178031550_178031661_178032429_178032496_178033026_178033086_178034704_178034802_178037693_178037802_178037896
transcript_123462.known	chr6	-	1515	5	FSM	ENSG00000093144.19	ENST00000454591.6	1515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	292.361398785818	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-7	True	NA	NA	False	ACTAAA	-3	NA	127343562	127289266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127343335
transcript_123480.known	chr6	-	2339	6	FSM	ENSG00000093144.19	ENST00000454859.8	2339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	244.017704275735	3999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	0	True	NA	-1	True	AATAAA	-22	NA	127343609	127288711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_123481.known	chr6	-	1966	4	FSM	ENSG00000093144.19	ENST00000368295.8	1966	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.779297410952	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCATAGATGTAAAAACTA	NA	False	NA	-51	True	NA	NA	NA	127331030	127288761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808
transcript_123482.known	chr6	-	1354	5	FSM	ENSG00000093144.19	ENST00000368291.6	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	271.418841460942	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCTGTCAATTCCA	10	True	NA	NA	False	AATATA	-16	NA	127343599	127289633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127330808_127331031_127343335
transcript_123483.known	chr6	-	854	7	FSM	ENSG00000093144.19	ENST00000368292.10	854	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	300.752805473199	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGAGCTATATTTG	-8	True	NA	NA	False	NA	NA	NA	127343359	127289987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127315933_127315975_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_123488.nic	chr6	-	914	2	ISM	ENSG00000189367.15	ENST00000368281.1	6580	4	4474	3361	343	-2656	3prime_fragment	FALSE	canonical	3	38	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGTGTTTATTTAA	7518	False	NA	-37	True	NA	NA	NA	127446742	127443703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_127444283_127446407
transcript_123496.nic	chr6	-	1863	5	ISM	ENSG00000152894.15	ENST00000524534.5	2441	14	-109	175695	-8	-3751	5prime_fragment	FALSE	canonical	3	158	junction_2	17.7253349756782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAAGATGAGTTTAAT	408	False	NA	NA	False	AATAGA	-19	NA	128520624	128239130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128520258
transcript_123498.nic	chr6	-	1583	4	ISM	ENSG00000152894.15	ENST00000524534.5	2441	14	-109	178345	-8	-6401	5prime_fragment	FALSE	canonical	3	158	junction_1	20.4613456709637	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAACAAAACAAGAAA	408	False	NA	NA	False	AAAAAG	-1	NA	128520624	128241780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_128242603_128322038_128322311_128397565_128397689_128520258
transcript_123499.nic	chr6	-	1412	4	ISM	ENSG00000152894.15	ENST00000524534.5	2441	14	-109	178516	-8	-6572	5prime_fragment	FALSE	canonical	3	158	junction_1	20.4613456709637	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGCCAGGCGTGGTGG	408	False	NA	NA	False	NA	NA	NA	128520624	128241951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_128242603_128322038_128322311_128397565_128397689_128520258
transcript_123500.nnic	chr6	-	880	4	NNC	ENSG00000152894.15	novel	1456	4	NA	NA	-8	27828	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	92.8307899112981	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCTGGTATTTTGT	408	False	NA	NA	False	AATAAA	-15	NA	128520624	128293212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_128293332_128322038_128322311_128397565_128397689_128520258
transcript_123501.nnic	chr6	-	891	4	NNC	ENSG00000152894.15	novel	1456	4	NA	NA	-8	16342	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	90.9542009291856	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGCAAAGTTGCATT	408	False	NA	NA	False	AATAAA	-15	NA	128520624	128304698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_128304829_128322038_128322311_128397565_128397689_128520258
transcript_123502.known	chr6	-	563	4	FSM	ENSG00000152894.15	ENST00000532751.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	97.5841517187431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTACAATGAAGGAGAAC	-7	True	NA	NA	False	AAAAAG	-13	NA	128520599	128322250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_128322311_128397565_128397689_128409293_128409333_128520258
transcript_123503.known	chr6	-	1456	4	FSM	ENSG00000152894.15	ENST00000392449.4	1456	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	95.4602884275271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTTTATGATTCTGTGA	27	True	NA	NA	False	ATTAAA	-24	NA	128520565	128321402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_128322311_128397565_128397689_128491731_128491850_128520258
transcript_123504.known	chr6	-	1722	3	FSM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	11	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGAGTTGAGTTTTC	5	True	NA	NA	False	AAAAAG	-22	NA	128520587	128321040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_128322311_128397565_128397689_128520258
transcript_12351.known	chr1	-	770	6	FSM	ENSG00000242193.11	ENST00000512906.2	770	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	8.38093073590279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATCTTGGAGTCAC	16	True	NA	NA	False	NA	NA	NA	178037947	178007965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_178008150_178022439_178022669_178026154_178026256_178034704_178034802_178037693_178037802_178037896
transcript_123510.nic	chr6	-	758	2	ISM	ENSG00000152894.15	ENST00000525459.1	1722	3	-37	76256	-8	-75046	5prime_fragment	FALSE	canonical	3	186	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAGAAAAAACAGAATAA	408	False	NA	NA	False	AATAAA	-31	NA	128520624	128397296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_128397689_128520258
transcript_123511.known	chr6	-	526	2	FSM	ENSG00000152894.15	ENST00000368202.4	526	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAATCGTTTATTTCCCT	22	True	NA	NA	False	AATAAA	-20	NA	128520570	128518927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_128519142_128520258
transcript_123512.known	chr6	-	4414	15	FSM	ENSG00000146376.11	ENST00000368149.3	4414	15	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	4.96312936172577	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATTCTTAAAGGAG	-1	True	NA	-1	True	AATAAA	-29	NA	129710177	129576131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_129578605_129580069_129580132_129583987_129584113_129599215_129599357_129600641_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_123517.nic	chr6	-	1502	11	ISM	ENSG00000146376.11	ENST00000368149.3	4414	15	-49	24670	-49	-22383	5prime_fragment	FALSE	canonical	3	44	junction_8	4.6743983570081	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATGACAGTCATGAATG	-3	True	NA	NA	False	AATAAA	-9	NA	129710226	129600801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_12352.known	chr1	-	2329	2	FSM	ENSG00000224687.2	ENST00000421505.1	2329	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGTAGAATGATTTAT	NA	False	NA	-8	True	AATAAA	-19	NA	178093984	178091507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_178093413_178093560
transcript_123521.known	chr6	+	4206	23	FSM	ENSG00000198945.8	ENST00000361794.7	4206	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	11.0094812632544	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTTACATATGTAT	-2	True	NA	94	True	AATAAA	-13	NA	130018580	130141438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130049755_130049831_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_123524.known	chr6	+	3165	22	FSM	ENSG00000198945.8	ENST00000533560.5	3165	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	11.2946518758983	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATAAATTAGGTAGTGT	6	True	NA	NA	False	AATAAA	-11	NA	130018588	130140480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_123529.known	chr6	+	665	6	FSM	ENSG00000198945.8	ENST00000526087.5	665	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.9259678094514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATGAGTGTCTTTCTGG	0	True	NA	NA	False	NA	NA	NA	130018582	130051343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130049650_130049831_130051248
transcript_123530.nic	chr6	+	557	5	ISM	ENSG00000198945.8	ENST00000533560.5	3165	22	-13	89072	-5	65	5prime_fragment	FALSE	canonical	3	30	junction_1	15.7856738848869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTTTTGCCCCATTCC	-7	True	NA	NA	False	NA	NA	NA	130018575	130051408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130051248
transcript_123531.known	chr6	+	4245	23	FSM	ENSG00000198945.8	ENST00000368136.3	4245	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.9766346946455	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGATTTTTAAGA	1944	False	NA	105	True	AATAAA	-24	NA	130020556	130141449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_130020669_130022226_130022306_130042684_130042802_130049281_130049394_130049755_130049831_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_123532.known	chr6	-	2377	14	FSM	ENSG00000164483.17	ENST00000368134.6	2377	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	32.7330967264293	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	440	False	NA	-13	True	AATAAA	-17	NA	130365425	130144314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130216570_130216617_130222693_130222814_130312977_130313094_130365119
transcript_123535.nnic	chr6	-	1955	11	NNC	ENSG00000164483.17	novel	2093	12	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_10	23.2680037820179	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	0	True	NA	-13	True	AATAAA	-17	NA	130215638	130144314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130215472
transcript_123536.nic	chr6	-	1961	11	NIC	ENSG00000164483.17	novel	2093	12	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_10	24.5894286228859	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTCGATTTATTTTGA	7283	False	NA	-13	True	AATAAA	-17	NA	130215705	130144314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130215533
transcript_12354.known	chr1	-	300	2	FSM	ENSG00000224687.2	ENST00000452867.1	300	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGCAGTGTGTTGGC	NA	False	NA	1	True	NA	NA	NA	178093572	178093149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_178093411_178093533
transcript_12355.nnic	chr1	+	1014	7	NNC	ENSG00000075391.17	novel	9843	18	NA	NA	-57834	-14993	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.820126832657	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGAATAATTATGTAGG	33	False	NA	NA	False	AAAAAG	-10	NA	178283636	178442914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_178283814_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674
transcript_123553.known	chr6	-	1877	11	FSM	ENSG00000164483.17	ENST00000457563.6	1877	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	25.7349956285211	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTGTCGATTTATTT	7101	False	NA	-16	True	AATAAA	-14	NA	130215887	130144317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_130144805_130145339_130145423_130146009_130146182_130154824_130155026_130175840_130176009_130184102_130184188_130184437_130184624_130209494_130209609_130214336_130214527_130215194_130215295_130215796
transcript_123554.known	chr6	+	2899	2	FSM	ENSG00000164484.12	ENST00000617887.4	2899	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTTCATGTTTTCC	173	False	NA	12	True	AATAAA	-23	NA	130366280	130443061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_130366525_130440406
transcript_123555.known	chr6	+	2512	2	FSM	ENSG00000256162.2	ENST00000541421.2	2512	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTCACATTGTCATTA	-1	True	NA	NA	False	AATAAA	-22	NA	130827405	130837135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_130827652_130834869
transcript_123556.known	chr6	-	4456	20	FSM	ENSG00000079819.19	ENST00000368128.6	4456	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	164.819804231882	1834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAACTTGTCACTTCTCTT	NA	False	NA	-11	True	AATAAA	-14	NA	131063318	130839351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_130840599_130858135_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130878103_130878251_130880143_130880207_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_123557.known	chr6	-	4186	18	FSM	ENSG00000079819.19	ENST00000527411.5	4186	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.35009679348	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAACTTGTCACTTCTCT	24	False	NA	-12	True	AATAAA	-13	NA	131063258	130839352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_130840595_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_123561.known	chr6	-	4247	18	FSM	ENSG00000079819.19	ENST00000628542.2	4247	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_17	45.679112457215	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	NA	False	NA	-6	True	AATAAA	-19	NA	131063322	130839346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
transcript_123569.known	chr6	+	3150	8	FSM	ENSG00000118507.18	ENST00000431975.7	3150	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	28.0909601262813	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	10	True	NA	5	True	AATAAA	-17	NA	131135466	131283532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131135783_131145284_131145417_131160058_131160199_131165080_131165218_131169112_131169274_131199460_131199574_131219660_131219809_131281529
transcript_12357.nic	chr1	+	879	6	ISM	ENSG00000075391.17	ENST00000462775.5	14453	16	-31	41233	-31	-14993	5prime_fragment	FALSE	canonical	3	16	junction_1	12.1095004025765	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGAATAATTATGTAGG	9834	False	NA	NA	False	AAAAAG	-10	NA	178341439	178442914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_178341609_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674
transcript_123570.known	chr6	+	2281	8	FSM	ENSG00000118507.18	ENST00000683794.1	2281	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	11.8166261285201	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	10	True	NA	5	True	AATAAA	-17	NA	131135466	131283532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131135783_131145284_131145417_131160058_131160199_131165080_131165218_131169112_131169274_131199460_131199574_131219660_131219809_131282398
transcript_123573.nnic	chr6	+	1829	5	NNC	ENSG00000118507.18	novel	3150	8	NA	NA	-16342	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	46.3485436664411	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	NA	False	NA	5	True	AATAAA	-17	NA	131183648	131283532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131183822_131184372_131184634_131199460_131199574_131219660_131219809_131282398
transcript_123576.nnic	chr6	+	1559	4	NNC	ENSG00000118507.18	novel	3150	8	NA	NA	-16333	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.9023632142254	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	NA	False	NA	5	True	AATAAA	-17	NA	131183657	131283532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131183822_131199460_131199574_131219660_131219809_131282398
transcript_123581.known	chr6	+	1006	3	FSM	ENSG00000118507.18	ENST00000537868.5	1006	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTTTGGGATTTT	-6	True	NA	34	True	NA	NA	NA	131199990	131283184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131200063_131219660_131219809_131282398
transcript_123585.nnic	chr6	+	1471	2	NIC	ENSG00000118507.18	novel	2461	2	NA	NA	121	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	134	False	NA	5	True	AATAAA	-17	NA	131250279	131283532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_131250617_131282398
transcript_123587.known	chr6	-	5247	29	FSM	ENSG00000112282.18	ENST00000368068.8	5247	29	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_18	24.873865475102	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGGAATGAGTGTCG	-35	True	NA	-9	True	AATAAA	-20	NA	131628242	131586731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_123588.known	chr6	+	7438	25	FSM	ENSG00000197594.14	ENST00000647893.1	7438	25	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	14.470695963452	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGCTTTCCTTTGT	1	True	NA	14	True	AATAAA	-15	NA	131808019	131895155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131808276_131847775_131847849_131849989_131850107_131851141_131851268_131852174_131852236_131854925_131855024_131858667_131858748_131860386_131860507_131861594_131861705_131864505_131864572_131864865_131864939_131868017_131868127_131869357_131869490_131872069_131872102_131872922_131873051_131874267_131874338_131875775_131875864_131876991_131877162_131878541_131878594_131879879_131880035_131882344_131882475_131883693_131883775_131884930_131885064_131886561_131886725_131890340
transcript_123623.nnic	chr6	+	781	3	Fusion	ENSG00000280058.1_ENSG00000236673.5	novel	601	3	NA	NA	-237	-73	multi-exon	FALSE	canonical	3	14	junction_2	17.5	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTGTAGCTTCAATGTT	7746	False	NA	4	True	AATAAA	-20	NA	131901725	131911454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131910784_131910956_131911270
transcript_123626.nnic	chr6	+	2539	3	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-66	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	10.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACCTGCACTTGTATGTT	7917	False	NA	10	True	AATAAA	-16	NA	131901896	131920562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131910784_131910956_131918449
transcript_123628.nnic	chr6	+	1046	3	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-237	263	multi-exon	FALSE	canonical	0	0	junction_2	24.5	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTTGTTTTAAATTT	7746	False	NA	16	True	AATAAA	-17	NA	131901725	132077656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131910784_131910956_132077207
transcript_123631.nnic	chr6	+	2644	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-236	1	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	40.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCACTTGTATGTTCATT	7747	False	NA	14	True	AATAAA	-20	NA	131901726	131920566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131904132_131904235_131918449
transcript_123632.nnic	chr6	+	1133	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-233	-149	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	66.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7750	False	NA	NA	False	ATTAAA	-21	NA	131901729	131907381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131903946_131904235_131906958
transcript_123633.nnic	chr6	+	929	3	Fusion	ENSG00000280058.1_ENSG00000236673.5	novel	601	3	NA	NA	-233	-524	multi-exon	FALSE	canonical	3	43	junction_2	50	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCTCTATTCTTGTGA	7750	False	NA	9	True	AATATA	-18	NA	131901729	131911003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131903946_131904235_131910784
transcript_123636.nnic	chr6	+	2827	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-233	1	combination_of_known_splicesites	FALSE	canonical	3	101	junction_2	21	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCACTTGTATGTTCATT	7750	False	NA	14	True	AATAAA	-20	NA	131901729	131920566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_123643.nnic	chr6	+	1100	2	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-203	4086	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGCATGATGGTAT	7780	False	NA	NA	False	NA	NA	NA	131901759	131924651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131923943
transcript_123645.known	chr6	+	1337	1	FSM	ENSG00000280058.1	ENST00000622916.1	1337	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTAGTGCACTTTCCTGT	7251	False	NA	46	True	AATGAA	-43	NA	131910190	131911527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131910200_131911500
transcript_123646.known	chr6	+	2305	2	FSM	ENSG00000236673.5	ENST00000454596.1	2305	2	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_1	0	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	27	False	NA	13	True	AATAAA	-19	NA	131901962	131920565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131902152_131918449
transcript_12365.nnic	chr1	+	593	3	NIC	ENSG00000213057.5	novel	2577	3	NA	NA	-62	-287	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCCCTGTAATGAT	NA	False	NA	NA	False	AATAAA	-18	NA	178542689	178548602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_178542886_178547093_178547164_178548275
transcript_123654.nnic	chr6	+	1040	5	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-57	264	multi-exon	FALSE	canonical	1	4	junction_2	17.1318416990118	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	7926	False	NA	17	True	AATAAA	-18	NA	131901905	132077657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131910784_131910956_132009856_132009925_132074792_132074898_132077207
transcript_123655.nnic	chr6	+	1028	4	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-216	264	multi-exon	FALSE	canonical	0	0	junction_1	8.17856276425687	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	7767	False	NA	17	True	AATAAA	-18	NA	131901746	132077657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_132009856_132009925_132074792_132074898_132077207
transcript_123658.nnic	chr6	+	985	4	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-114	264	multi-exon	FALSE	canonical	0	0	junction_2	8.17856276425687	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	7869	False	NA	17	True	AATAAA	-18	NA	131901848	132077657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131923943_131924071_132074792_132074898_132077207
transcript_123661.nnic	chr6	+	1028	4	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-113	264	multi-exon	FALSE	canonical	0	0	junction_2	20.1163283594862	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	7870	False	NA	17	True	AATAAA	-18	NA	131901849	132077657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131910784_131910956_132074792_132074898_132077207
transcript_123664.nnic	chr6	+	880	3	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-114	264	multi-exon	FALSE	canonical	0	0	junction_2	5.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	7869	False	NA	17	True	AATAAA	-18	NA	131901848	132077657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131923943_131924071_132077207
transcript_123667.nnic	chr6	+	840	3	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	302	264	multi-exon	FALSE	canonical	0	0	junction_1	10	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	1010	False	NA	17	True	AATAAA	-18	NA	131903949	132077657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131904235_132074792_132074898_132077207
transcript_123669.known	chr6	-	2338	5	FSM	ENSG00000118523.6	ENST00000367976.4	2338	5	0	0	0	0	multi-exon	TRUE	canonical	3	341	junction_4	51.3225096814254	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGGTTATTCATTTAT	-1	True	NA	NA	False	AATAAA	-21	NA	131951372	131948175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_131949561_131949948_131950161_131950291_131950544_131950769_131950993_131951106
transcript_12367.nnic	chr1	+	486	3	NNC	ENSG00000213057.5	novel	2577	3	NA	NA	-62	113513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTGGGCTGTTGAGAGAT	NA	False	NA	NA	False	NA	NA	NA	178542689	178662402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_178542886_178547093_178547164_178662182
transcript_123675.nnic	chr6	-	595	3	NNC	ENSG00000146409.12	novel	2377	15	NA	NA	-63	-16881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGAATTCCAAAATCTC	4087	False	NA	NA	False	AATATA	-25	NA	132813402	132804357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_132804589_132804697_132804952_132813292
transcript_123676.known	chr6	-	2452	14	FSM	ENSG00000146409.12	ENST00000275227.9	2452	14	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	28.3590670930927	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-6	True	NA	-2	True	AATAAA	-21	NA	132798637	132769369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
transcript_12370.nnic	chr1	+	795	3	Fusion	ENSG00000273384.1_ENSG00000213057.5	novel	2577	3	NA	NA	-24	-9	multi-exon	FALSE	canonical	0	0	junction_2	3.5	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCGTAAGCATGCTTGCA	NA	False	NA	NA	False	CATAAA	-16	NA	178542727	178652273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_178542886_178547093_178547164_178651706
transcript_123701.known	chr6	+	503	6	FSM	ENSG00000112306.8	ENST00000230050.4	503	6	0	0	0	0	multi-exon	FALSE	canonical	3	6218	junction_1	1371.47284333304	620655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	0	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_132814614_132814731_132814783_132814971_132815089_132816460_132816564_132816959_132817062_132817479
transcript_123702.known	chr6	+	639	6	FSM	ENSG00000112306.8	ENST00000484616.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	3440.23388739777	17946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	0	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_132814614_132814731_132814783_132814971_132815225_132816460_132816564_132816959_132817062_132817479
transcript_123703.known	chr6	+	1280	2	FSM	ENSG00000118526.7	ENST00000367882.5	1280	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGATATTTGGAGTGAT	0	True	NA	NA	False	AATAAA	-22	NA	133889112	133892257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_133889848_133891712
transcript_123708.known	chr6	+	1625	7	FSM	ENSG00000028839.10	ENST00000613034.4	1625	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.694364576393	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTATAACTTTTATTCCC	-3	True	NA	18	True	AATAAA	-23	NA	133952169	133987499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_133952731_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
transcript_12371.known	chr1	+	7492	20	FSM	ENSG00000116191.19	ENST00000367635.8	7492	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	15.2184463081236	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTGGGTGAGGATGTTT	-3	True	NA	-84	True	AATAAA	-14	NA	178725243	178921840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178892229_178892308_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
transcript_123711.known	chr6	-	5572	5	FSM	ENSG00000146411.6	ENST00000275230.6	5572	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	3.89711431702997	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTGCATAGATTTTAAA	1	True	NA	NA	False	AATACA	-38	NA	134052624	133987580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_133991309_134001996_134002130_134006811_134006935_134028380_134029722_134052377
transcript_123714.known	chr6	+	4199	7	FSM	ENSG00000028839.10	ENST00000237264.9	4199	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	49.724798195222	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTTCTATGCATTTT	-1	True	NA	9	True	AATAAA	-22	NA	133953223	133990432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576_133984672_133986960
transcript_123715.known	chr6	-	2401	12	FSM	ENSG00000118515.12	ENST00000237305.11	2401	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_11	6.61078507734467	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATTGTGTCATGTGTT	3447	False	NA	-5	True	AATAAA	-18	NA	134174896	134169251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134174731
transcript_12372.known	chr1	+	7512	19	FSM	ENSG00000116191.19	ENST00000367634.7	7441	19	-72	1	-18	1	multi-exon	FALSE	canonical	3	18	junction_14	22.4372925899145	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGGGTGAGGATGTTTT	299	False	NA	-83	True	AATAAA	-15	NA	178725146	178921841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
transcript_123721.known	chr6	-	2594	2	FSM	ENSG00000118515.12	ENST00000524929.1	2594	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATCTATTTATCGCTCC	478	False	NA	NA	False	AATAAA	-15	NA	134317629	134259792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_134262149_134317391
transcript_123722.nnic	chr6	-	842	2	NNC	ENSG00000118515.12	novel	3245	14	NA	NA	36	-53678	intron_retention	FALSE	canonical	1	1	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATAGCCCATTATCCAG	-14	True	NA	NA	False	AATAAA	-25	NA	134318076	134315715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_134315873_134317391
transcript_123726.known	chr6	-	2703	17	FSM	ENSG00000112339.15	ENST00000367826.6	2703	17	0	0	0	0	multi-exon	FALSE	canonical	2	64	junction_15	196.62471193558	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTGTGTTTTGTT	-12	True	NA	NA	False	AATAAA	-19	NA	135054819	134964632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135050581_135050648_135054648
transcript_123727.known	chr6	-	2793	5	FSM	ENSG00000112339.15	ENST00000367822.9	2793	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	388.637684739913	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGCATGTTCTTTGA	NA	False	NA	3	True	AATAAA	-22	NA	135054884	135035856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135038027_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_123728.known	chr6	-	551	4	FSM	ENSG00000112339.15	ENST00000524715.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	384.843113777838	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTGTATCTGGAAAGA	-10	True	NA	NA	False	NA	NA	NA	135054817	135002781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135002843_135039572_135039768_135042000_135042127_135054648
transcript_123729.known	chr6	+	3684	16	FSM	ENSG00000118513.20	ENST00000341911.10	3684	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	12.7198881895855	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTCTCTTATT	12	True	NA	12	True	AATAAA	-22	NA	135181307	135219172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_135181537_135185902_135186021_135187833_135187906_135189790_135189884_135190126_135190348_135192323_135192559_135193837_135193919_135194355_135194461_135195747_135196003_135196960_135197324_135198907_135199051_135200084_135200200_135200289_135200416_135201638_135201750_135203216_135203325_135217863
transcript_123734.nic	chr6	-	1187	6	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-71	68815	-15	0	5prime_fragment	FALSE	canonical	3	46	junction_5	13.7317151150175	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	625	False	NA	NA	False	AAAAAG	-2	NA	135497796	135463136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_123738.known	chr6	-	1074	5	FSM	ENSG00000135541.22	ENST00000524469.5	1074	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	29.0376910239089	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	7	True	NA	NA	False	AAAAAG	-2	NA	135497737	135463136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135463307_135465813_135466374_135490622_135490748_135492227_135492292_135497582
transcript_12374.known	chr1	+	1970	10	FSM	ENSG00000116191.19	ENST00000495034.5	1970	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	15.1860885006843	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	317	False	NA	NA	False	AAAAAG	-16	NA	178725164	178879788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901
transcript_123740.nic	chr6	-	978	5	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-71	71531	-15	-2716	5prime_fragment	FALSE	canonical	3	46	junction_4	14.3418095092635	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGAAGTTCCAGTCT	625	False	NA	NA	False	AAAAAG	-7	NA	135497796	135465852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_123745.known	chr6	-	712	6	FSM	ENSG00000135541.22	ENST00000488690.6	712	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	30.7011400439788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTTTTTTTTTTTTTTT	-9	True	NA	NA	False	AATAAA	-22	NA	135497649	135489916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135490226_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_123746.known	chr6	-	719	5	FSM	ENSG00000135541.22	ENST00000680968.1	719	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	31.5792653492763	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATAGTTTTTTTTTTTTT	1	True	NA	NA	False	AATAAA	-20	NA	135497743	135489918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135490226_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_123748.known	chr6	-	1586	9	FSM	ENSG00000146410.12	ENST00000367784.6	1586	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	34.7661832820343	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTGTAGCAACCA	-2	True	NA	-6	True	AATAAA	-18	NA	136250292	136231029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136247460_136247561_136249036_136249154_136250263
transcript_123750.known	chr6	-	1524	8	FSM	ENSG00000146410.12	ENST00000451457.6	1524	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	20.6792807675031	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTAGCAACCAAAATTC	9916	False	NA	0	True	AATAAA	-24	NA	136250324	136231023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
transcript_123755.known	chr6	-	1789	8	FSM	ENSG00000146410.12	ENST00000420702.6	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	7.68513008932158	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGTGTTTTGTAGCA	-21	True	NA	-10	True	AATAAA	-14	NA	136250311	136231033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136249975
transcript_123759.known	chr6	-	5371	12	FSM	ENSG00000029363.17	ENST00000527536.5	5371	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	203.388485497724	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGTTTGTTTACCT	-17	True	NA	-16	True	AATAAA	-17	NA	136289829	136258585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136261116_136261264_136261478_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_12376.nic	chr1	+	558	5	ISM	ENSG00000116191.19	ENST00000495034.5	1970	10	29	71708	-25	-71708	5prime_fragment	FALSE	canonical	3	103	junction_2	5.97390157267426	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTCTGCACCAAATGC	-7	True	NA	NA	False	AATAAA	-10	NA	178725193	178808080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044
transcript_123760.known	chr6	-	5640	14	FSM	ENSG00000029363.17	ENST00000527613.5	5640	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	283.15003236518	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATAACTGCTGTTGTTTG	17	True	NA	-23	True	AATAAA	-10	NA	136289795	136258592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269140_136269304_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_123761.known	chr6	-	4186	13	FSM	ENSG00000029363.17	ENST00000530767.5	4186	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	212.361719714265	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGCATGACTATGTG	31	True	NA	0	True	AATAAA	-32	NA	136289781	136259350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136275990_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_123762.known	chr6	-	2423	9	FSM	ENSG00000029363.17	ENST00000529826.5	2423	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	265.3474137805	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATTACAAGGAATACA	-32	True	NA	0	True	AAGAAA	-16	NA	136289844	136269475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136269613_136271994_136272077_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_123764.known	chr6	-	3758	18	FSM	ENSG00000135525.19	ENST00000354570.8	3758	18	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_12	64.9126642438804	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGCTTTCTCATATGT	4	True	NA	-31	True	AATAAA	-19	NA	136550422	136342733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_123769.known	chr6	-	4497	17	FSM	ENSG00000135525.19	ENST00000618822.4	4497	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	169.847725919425	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTCCTTCCTACACC	1119	False	NA	NA	False	NA	NA	NA	136550819	136342280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_12377.nic	chr1	+	523	4	ISM	ENSG00000116191.19	ENST00000495034.5	1970	10	29	94180	-25	-94180	5prime_fragment	FALSE	canonical	3	103	junction_2	6.54896090146283	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAGTTTTGAGAATGTT	-7	True	NA	NA	False	TTTAAA	-17	NA	178725193	178785608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556
transcript_123778.nic	chr6	-	982	8	ISM	ENSG00000135525.19	ENST00000354570.8	3758	18	-92	29767	-92	-28661	5prime_fragment	FALSE	canonical	3	569	junction_2	62.4633770251638	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTAGCTGTTGGGAGCA	1424	False	NA	NA	False	NA	NA	NA	136550514	136372500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_123782.known	chr6	+	334	1	FSM	ENSG00000220660.2	ENST00000407767.1	334	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTTTTGTAACAAGTTC	NA	False	NA	NA	False	NA	NA	NA	136364128	136364462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_136364100_136364500
transcript_123783.known	chr6	-	5157	30	FSM	ENSG00000197442.10	ENST00000359015.5	5157	30	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	3.91588125974576	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGATAAATTCTAAAG	20	True	NA	NA	False	ATTAAA	-17	NA	136792477	136557045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136557819_136558799_136558877_136561532_136561646_136562502_136562616_136567630_136567875_136580300_136580407_136583554_136583741_136592172_136592342_136592436_136592615_136601021_136601043_136601801_136601980_136605208_136605367_136611281_136611388_136613119_136613257_136614158_136614287_136622847_136622982_136637324_136637407_136639542_136639639_136642519_136642570_136650983_136651092_136656306_136656461_136659218_136659379_136669282_136669396_136694139_136694311_136695950_136696058_136697218_136697388_136698488_136698683_136705109_136705134_136720449_136720590_136791709
transcript_123784.known	chr6	+	1454	10	FSM	ENSG00000112357.14	ENST00000318471.5	1454	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	11.5960827783553	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTCCCCCAAAAGACTG	5	True	NA	40	True	AATAAA	-27	NA	136822591	136913934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_136822796_136825213_136825272_136826318_136826470_136845614_136845693_136846072_136846182_136866626_136866734_136869889_136870004_136872197_136872254_136898141_136898242_136913457
transcript_123788.known	chr6	-	3486	7	FSM	ENSG00000016402.14	ENST00000316649.10	3486	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.07769755210323	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTTATTAATTCCAT	1	True	NA	NA	False	AATAAA	-42	NA	137044965	136999970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137011273_137011453_137016967_137017104_137044640
transcript_123789.known	chr6	-	3522	6	FSM	ENSG00000016402.14	ENST00000367748.4	3522	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.17612260356422	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTTATTAATTCCAT	129	False	NA	NA	False	AATAAA	-42	NA	137045180	136999970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137016967_137017104_137044640
transcript_123796.known	chr6	-	2492	7	FSM	ENSG00000027697.15	ENST00000644894.1	2492	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	93.4482922975767	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	143	False	NA	-15	True	AATAAA	-3	NA	137219244	137197496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137218671
transcript_123797.known	chr6	-	1964	7	FSM	ENSG00000027697.15	ENST00000647124.1	1964	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	93.8130528705302	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	359	False	NA	-15	True	AATAAA	-3	NA	137219028	137197496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137218983
transcript_123798.known	chr6	-	1948	7	FSM	ENSG00000027697.15	ENST00000645753.1	1948	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	92.3543898974669	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	-4	True	NA	-15	True	AATAAA	-3	NA	137219122	137197496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219093
transcript_123799.known	chr6	-	2074	7	FSM	ENSG00000027697.15	ENST00000367739.9	2074	7	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_4	20.0582485111072	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTATTCATTTATTC	2	True	NA	-3	True	AATAAA	-15	NA	137219385	137197484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219242
transcript_12380.known	chr1	+	2031	6	FSM	ENSG00000186283.14	ENST00000367627.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	68.818602136341	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	12	True	NA	19	True	ATTAAA	-20	NA	179082069	179095996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_179082388_179082939_179083054_179085627_179085894_179087910_179088090_179094092_179094218_179094967
transcript_123804.known	chr6	-	2196	1	FSM	ENSG00000177468.7	ENST00000367734.4	2196	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGCCTTTGCCTAAAAT	-1	True	NA	NA	False	AATAAA	-20	NA	137494394	137492198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137492200_137494400
transcript_123810.known	chr6	-	4198	3	FSM	ENSG00000112378.12	ENST00000421351.4	4198	3	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_1	38	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTGAGCATGCGTG	0	True	NA	-1	True	AATAAA	-15	NA	138107419	138088504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138092269_138096353_138096495_138107126
transcript_123813.known	chr6	-	947	4	FSM	ENSG00000135540.12	ENST00000426841.6	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.87400787401181	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGGTGTCAAAGAACT	8	True	NA	NA	False	TATAAA	-39	NA	138499494	138446789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138447194_138473305_138473434_138496218_138496372_138499232
transcript_123817.known	chr6	-	609	2	FSM	ENSG00000135540.12	ENST00000534376.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCTTGTATCTTGTA	-4	True	NA	-5	True	AATAAA	-15	NA	138572462	138571529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138572062_138572385
transcript_123818.nnic	chr6	-	660	2	NNC	ENSG00000135540.12	novel	609	2	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCTTGTATCTTGTA	-4	True	NA	-5	True	AATAAA	-15	NA	138572569	138571529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_138572062_138572441
transcript_123819.known	chr6	-	7500	7	FSM	ENSG00000135540.12	ENST00000427025.6	7500	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.8927197372091	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAATATTTCTTTTT	-3	True	NA	-13	True	AATAAA	-17	NA	138572540	138422042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138424817_138429710_138429844_138430392_138433681_138447000_138447194_138473305_138473434_138496218_138496372_138571709
transcript_123821.known	chr6	+	10010	4	FSM	ENSG00000051620.11	ENST00000607197.6	10010	4	0	0	0	0	multi-exon	TRUE	canonical	3	1137	junction_3	166.317634529702	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTAGTCTTTTTTAG	-63	True	NA	NA	False	ATTAAA	-18	NA	138404222	138422197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_138404598_138405144_138405281_138405970_138406152_138412879
transcript_123822.nnic	chr6	+	679	4	NNC	ENSG00000051620.11	novel	10010	4	NA	NA	346	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	653.397445833868	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCTAGTGTCTTCT	91	False	NA	16	True	AGTAAA	-1	NA	138404592	138413154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_138404680_138405144_138405281_138405970_138406152_138412879
transcript_123826.known	chr6	+	703	3	FSM	ENSG00000225177.6	ENST00000458733.5	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	1904	False	NA	26	True	AATAAA	-19	NA	138694389	138697288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_138694548_138696596_138696756_138696902
transcript_123827.known	chr6	+	917	3	FSM	ENSG00000225177.6	ENST00000432673.1	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	62	False	NA	26	True	AATAAA	-19	NA	138692547	138697288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_138692618_138694392_138694548_138696596
transcript_12383.nic	chr1	+	1407	3	ISM	ENSG00000186283.14	ENST00000367627.8	2031	6	5767	0	2039	0	3prime_fragment	FALSE	canonical	3	344	junction_1	18	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	5731	False	NA	19	True	ATTAAA	-20	NA	179087836	179095996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_179088090_179094092_179094218_179094967
transcript_123833.nic	chr6	-	558	2	ISM	ENSG00000279968.3	ENST00000624173.1	2685	4	-79	38827	-79	-13910	5prime_fragment	FALSE	canonical	3	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGCCTTGTTCCTGAC	NA	False	NA	NA	False	AATATA	-16	NA	138773731	138764037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_138764379_138773514
transcript_123835.known	chr6	+	1247	6	FSM	ENSG00000024862.18	ENST00000617445.5	1247	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	15.0253119767944	1105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGTCTGTTTTGAA	0	True	NA	9	True	AATAAA	-19	NA	138773768	138793319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_138773903_138776078_138776279_138779821_138779986_138785226_138785382_138788365_138788389_138792748
transcript_12384.known	chr1	+	6840	16	FSM	ENSG00000057252.13	ENST00000367619.8	6840	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.2879565117552	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTTCTGATTCATT	-14	True	NA	29	True	ATTAAA	-19	NA	179293796	179358680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_179293937_179302676_179302803_179323436_179323496_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
transcript_123842.known	chr6	-	3161	20	FSM	ENSG00000135597.19	ENST00000258062.9	3161	20	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	73.371479208333	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGGAGGGTAGATTGT	4	True	NA	-15	True	AATAAA	-16	NA	138988261	138904869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138926400_138926482_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_123845.known	chr6	-	2468	19	FSM	ENSG00000135597.19	ENST00000529597.5	2468	19	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_8	92.8207485319133	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTAGATTGTGTTTGTTGG	667	False	NA	-6	True	AATAAA	-25	NA	138987640	138904860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138905133_138907494_138907601_138908667_138908817_138911275_138911372_138912764_138912951_138914696_138914762_138915857_138915977_138917554_138917625_138920214_138920317_138921036_138921125_138929976_138930099_138941334_138941490_138943512_138943577_138943852_138944016_138944497_138944623_138945218_138945373_138945500_138945698_138947789_138947914_138987529
transcript_123860.known	chr6	+	782	3	FSM	ENSG00000146386.8	ENST00000367660.4	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_2	1	8484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTTTGTCATTTAAG	23	True	NA	31	True	AATAAA	-23	NA	139028744	139043302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_139028876_139034154_139034222_139042718
transcript_123862.known	chr6	-	2382	2	FSM	ENSG00000164442.10	ENST00000367651.4	2382	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTGATGAGAGTTTT	0	True	NA	NA	False	ATTAAA	-17	NA	139374648	139371806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_139373953_139374412
transcript_123863.known	chr6	-	1249	4	FSM	ENSG00000238099.3	ENST00000654256.1	1249	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCTATTTTACTTAG	NA	False	NA	NA	False	AATAAA	-21	NA	139474658	139456894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_139457858_139472526_139472596_139472931_139473056_139474565
transcript_123864.known	chr6	-	1732	4	FSM	ENSG00000238099.3	ENST00000454788.3	1732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTGACTCCGAAGAAT	NA	False	NA	NA	False	AATAAA	-40	NA	139474638	139468994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_139470461_139472526_139472596_139472931_139473056_139474565
transcript_123865.known	chr6	-	665	3	FSM	ENSG00000234147.3	ENST00000683841.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	5	True	NA	NA	False	CATAAA	-18	NA	140898411	140845957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140846305_140852818_140852913_140898187
transcript_123866.known	chr6	-	608	2	FSM	ENSG00000234147.3	ENST00000683641.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	NA	False	NA	NA	False	CATAAA	-18	NA	140898448	140845957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140846305_140898187
transcript_123867.known	chr6	-	503	3	FSM	ENSG00000234147.3	ENST00000682196.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	-17	True	NA	NA	False	CATAAA	-18	NA	140898433	140845957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140846305_140898187_140898291_140898380
transcript_123868.nnic	chr6	+	785	3	Antisense	novelGene_ENSG00000222764.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAACTTGATATCTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	141453094	141487932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_141453373_141455180_141455362_141487606
transcript_123872.known	chr6	+	1284	7	FSM	ENSG00000009844.16	ENST00000367621.1	1284	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	457.160955122907	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAAATTAGAAATTACGT	-9	True	NA	17	True	AATAAA	-14	NA	142147256	142219067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_142147400_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
transcript_123875.known	chr6	+	6991	8	FSM	ENSG00000009844.16	ENST00000367630.9	6991	8	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_5	94.219890443059	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTCTATTATATCAT	-3	True	NA	23	True	AATAAA	-16	NA	142147262	142224685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
transcript_123876.known	chr6	+	6822	25	FSM	ENSG00000112414.15	ENST00000367609.8	6822	25	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_22	4.71919837825592	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAATTCCTTTATGAGTGA	-19	True	NA	31	True	AATAAA	-28	NA	142302006	142446261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_142302332_142309543_142309645_142367568_142367911_142370169_142370794_142381950_142382020_142383759_142383844_142390257_142390344_142392947_142393001_142393895_142393959_142397612_142397756_142400484_142400597_142401993_142402059_142402619_142402831_142403801_142403974_142405687_142405829_142408149_142408270_142409873_142409920_142411304_142411412_142414968_142415097_142415795_142416065_142417272_142417370_142419820_142420105_142437433_142437536_142438211_142438365_142443336
transcript_123884.known	chr6	+	1202	7	FSM	ENSG00000146416.19	ENST00000275235.8	1202	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.116395094794	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4	True	NA	NA	False	NA	NA	NA	143060900	143335530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143334077_143334096_143335050
transcript_123889.nnic	chr6	+	1493	7	NNC	ENSG00000146416.19	novel	1202	7	NA	NA	-6	14	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	108.574731048353	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	114	False	NA	11	True	AATAAA	-18	NA	143060846	143340304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143335050_143335120_143339638
transcript_123892.known	chr6	+	3064	6	FSM	ENSG00000146416.19	ENST00000646199.1	3064	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	102.104652195676	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACCCTGAACCTGAC	121	False	NA	-3	True	AATAAA	-4	NA	143060853	143340290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143337977
transcript_123893.known	chr6	+	2136	6	FSM	ENSG00000146416.19	ENST00000357847.9	2136	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	39.9469648408987	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCTCTCTGTCTCTC	-8	True	NA	NA	False	ATTAAA	-19	NA	143060888	143341058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143339638
transcript_123915.nnic	chr6	+	1308	5	NIC	ENSG00000146416.19	novel	2136	6	NA	NA	-6	14	combination_of_known_splicesites	FALSE	canonical	2	12	junction_3	109.407495172863	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	114	False	NA	11	True	AATAAA	-18	NA	143060846	143340304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_143061067_143136834_143136991_143165081_143165184_143333281_143333446_143339638
transcript_123920.nic	chr6	+	1259	5	NIC	ENSG00000146416.19	novel	2136	6	NA	NA	2	14	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	86.5660874707873	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	123	False	NA	11	True	AATAAA	-18	NA	143060855	143340304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_143061067_143165081_143165184_143284109_143284226_143333281_143333446_143339638
transcript_123926.known	chr6	+	3636	4	FSM	ENSG00000146416.19	ENST00000629020.2	3636	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	130.853607770923	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	2	True	NA	NA	False	AATAAA	-26	NA	143060898	143190597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187387
transcript_123927.known	chr6	+	3393	4	FSM	ENSG00000146416.19	ENST00000494282.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	113.743375875501	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	4	True	NA	NA	False	AATAAA	-26	NA	143060900	143190597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187628
transcript_123932.known	chr6	+	444	4	FSM	ENSG00000146416.19	ENST00000447498.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	95.9073627112237	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATGTAACTGGCATGT	120	False	NA	NA	False	NA	NA	NA	143060852	143333293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143165081_143165184_143284109_143284226_143333281
transcript_12394.nic	chr1	+	1381	4	ISM	ENSG00000057252.13	ENST00000367619.8	6840	16	-78	22197	5	-4827	5prime_fragment	FALSE	canonical	0	0	junction_3	69.0619689522067	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATACTGACTA	NA	False	NA	NA	False	NA	NA	NA	179293718	179336483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_179293937_179302676_179302803_179323436_179323496_179335505
transcript_123942.known	chr6	+	559	2	FSM	ENSG00000146416.19	ENST00000367596.5	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	4	True	NA	33	True	AATAAA	-27	NA	143060900	143061606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143061213
transcript_123943.nnic	chr6	+	1779	6	Fusion	ENSG00000217648.1_ENSG00000146416.19	novel	2136	6	NA	NA	0	254	multi-exon	FALSE	canonical	3	10	junction_5	99.487888710134	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGCAGAATGCCCTCAC	-8	True	NA	19	True	AATAAA	-38	NA	143060888	143343637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143342574
transcript_123954.known	chr6	-	6244	6	FSM	ENSG00000189007.16	ENST00000237283.9	6244	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	32.4	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTTAAAATATTATTT	2	True	NA	-23	True	AATAAA	-23	NA	143450695	143422831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_143428507_143428611_143428685_143432504_143432612_143433830_143433982_143438589_143438695_143450562
transcript_123962.nic	chr6	-	599	3	ISM	ENSG00000189007.16	ENST00000237283.9	6244	6	-60	10849	-60	-10849	5prime_fragment	FALSE	canonical	3	80	junction_1	5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAATAGTAAAATGAC	NA	False	NA	NA	False	AATATA	-29	NA	143450755	143433680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_143433982_143438589_143438695_143450562
transcript_123966.known	chr6	+	2750	12	FSM	ENSG00000034693.15	ENST00000367591.5	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_7	18.8263047905349	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAATGGATTGGAATT	0	True	NA	NA	False	AATAAA	-20	NA	143450804	143490616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143451116_143459084_143459217_143462915_143462998_143468121_143468166_143470960_143471086_143471382_143471450_143471556_143471612_143472159_143472329_143474785_143474857_143479075_143479199_143485151_143485249_143489142
transcript_123984.known	chr6	-	2385	7	FSM	ENSG00000001036.14	ENST00000002165.11	2385	7	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_3	51.2978773656593	737	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATATTTTCTTTCTTC	-10	True	NA	NA	False	CATAAA	-18	NA	143511720	143494811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
transcript_123989.known	chr6	+	2569	13	FSM	ENSG00000112419.15	ENST00000440869.7	9633	13	0	7064	0	-43	multi-exon	FALSE	canonical	1	24	junction_5	103.288296637239	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAGAAAATTGAA	-20	True	NA	-21	True	AAGAAA	-24	NA	143677964	143824121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_12399.known	chr1	+	3525	17	FSM	ENSG00000162782.16	ENST00000294848.12	3525	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.1659223816361	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGATCTATATTTGG	4	True	NA	NA	False	GATAAA	-19	NA	179591889	179691272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_179592126_179592601_179592848_179593459_179593868_179595627_179595819_179618598_179618683_179621034_179621092_179630766_179630921_179634456_179634630_179635666_179635888_179639838_179640052_179640378_179640446_179650866_179651068_179652038_179652198_179662103_179662287_179663347_179663492_179669193_179669405_179690695
transcript_123991.known	chr6	+	4367	12	FSM	ENSG00000112419.15	ENST00000367582.7	4367	12	0	0	0	0	multi-exon	FALSE	canonical	1	71	junction_10	67.509534068031	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATTTTGCAGAATATG	-2	True	NA	NA	False	ATTAAA	-15	NA	143677982	143826177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_123999.nic	chr6	+	1621	8	ISM	ENSG00000112419.15	ENST00000367582.7	4367	12	-35	48794	-17	11718	5prime_fragment	FALSE	canonical	3	207	junction_5	45.2561868585898	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATTCTATACTATAG	-37	True	NA	26	True	AAGAAA	-12	NA	143677947	143777383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327
transcript_124006.known	chr6	+	745	5	FSM	ENSG00000112419.15	ENST00000397980.3	745	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	135.757826662038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAACAGACCTTGATG	9	False	NA	NA	False	AATAAA	-25	NA	143678067	143755499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143755304
transcript_124009.known	chr6	+	825	4	FSM	ENSG00000112419.15	ENST00000402863.3	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	24.4994331000173	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATTAAAAGTAATAATC	34	True	NA	NA	False	ATTAAA	-4	NA	143678018	143754138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753
transcript_12401.known	chr1	-	8319	7	FSM	ENSG00000169905.13	ENST00000609928.6	8319	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	28.5233822211415	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCAGCGGACTGATT	-1	True	NA	-13	True	AATAAA	-14	NA	179877803	179839975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179865435_179865855_179877238_179877374_179877692
transcript_124011.known	chr6	+	358	2	FSM	ENSG00000112419.15	ENST00000545919.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGAGTTCTGATTTG	114	False	NA	NA	False	AATAAA	-14	NA	143678172	143712336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015
transcript_124012.known	chr6	+	616	4	FSM	ENSG00000112419.15	ENST00000542769.5	616	4	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	136.821863100245	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGCCTGCAGAGACCA	63	False	NA	NA	False	NA	NA	NA	143678047	143765474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143748984_143749066_143753753_143753913_143765260
transcript_124017.known	chr6	+	1853	11	FSM	ENSG00000135521.9	ENST00000367576.6	1853	11	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	40.1492216611979	2167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTGGTGTATTCATTT	-35	True	NA	15	True	ATTAAA	-24	NA	143843337	143863812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085_143863287_143863416
transcript_124019.known	chr6	-	690	1	FSM	ENSG00000169976.7	ENST00000367569.4	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGGTGTGAACTTTC	-4	True	NA	-7	True	CATAAA	-17	NA	144095573	144094883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_144094900_144095600
transcript_12402.nnic	chr1	-	1516	7	NNC	ENSG00000169905.13	novel	8319	7	NA	NA	-7	-7629	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	29.448637018073	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAGAAATTAAAGAGAA	-8	True	NA	4	True	NA	NA	NA	179877810	179847604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179847637_179850844_179851364_179852631_179852812_179856057_179856171_179865435_179865855_179877238_179877374_179877692
transcript_124021.known	chr6	+	12339	74	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	6494	0	6128	0	3prime_fragment	TRUE	canonical	3	22	junction_14	39.5178057499296	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGACTTTGATATTCTTCA	40	False	NA	8	True	AATAAA	-17	NA	144291828	144853034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580_144429742_144435934_144436139_144437564_144437747_144438744_144438896_144440351_144440472_144444280_144444383_144447210_144447319_144447601_144447782_144448599_144448770_144451369_144451494_144453781_144453870_144458769_144459012_144459173_144459355_144461196_144461343_144462653_144462867_144473719_144473834_144474603_144474760_144479811_144479983_144482208_144482389_144485384_144485520_144487547_144487698_144488672_144488835_144490070_144490200_144490928_144491103_144493300_144493457_144499256_144499428_144510943_144511124_144513908_144514038_144514649_144514821_144516228_144516388_144516810_144516949_144521979_144522172_144523015_144523189_144531051_144531203_144533084_144533261_144537581_144537718_144539293_144539444_144542794_144542871_144548639_144548855_144550964_144551083_144554687_144554894_144557156_144557312_144577098_144577289_144678405_144678579_144700086_144700244_144730356_144730487_144748245_144748515_144751805_144751953_144754719_144754799_144757928_144757990_144771906_144771969_144774289_144774365_144781921_144782124_144789193_144789280_144793833_144793992_144797823_144797991_144803035_144803148_144820881_144821019_144827347_144827387_144827610_144827677_144828789_144828856_144835779_144835939_144836300_144836542_144839172_144839285_144840739_144840833_144846804_144846828_144850988
transcript_124022.known	chr6	+	3220	25	FSM	ENSG00000152818.19	ENST00000367526.8	3220	25	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	24.3086347255913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCGGCCAACCAATGTTT	-6	True	NA	NA	False	NA	NA	NA	144583209	144851003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_144583601_144678405_144678579_144700086_144700244_144730356_144730487_144748245_144748515_144751805_144751953_144754719_144754799_144757928_144757990_144771906_144771969_144774289_144774365_144781921_144782124_144789193_144789280_144793833_144793992_144797823_144797991_144803035_144803148_144820881_144821019_144827347_144827387_144827610_144827677_144828789_144828856_144835779_144835939_144836300_144836542_144839172_144839285_144840739_144840833_144846804_144846828_144850988
transcript_124028.nic	chr6	+	1508	9	ISM	ENSG00000152818.19	ENST00000367545.8	12918	75	-103	423322	-103	3354	5prime_fragment	FALSE	canonical	3	23	junction_8	7.24137417898012	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGAAGAAGAGGCAATT	214	False	NA	18	True	TATAAA	-5	NA	144285231	144429712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_144285822_144291736_144291908_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580
transcript_124029.nic	chr6	+	993	8	NIC	ENSG00000152818.19	novel	597	6	NA	NA	-47	3354	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	13.844618788098	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGAAGAAGAGGCAATT	0	True	NA	18	True	TATAAA	-5	NA	144330772	144429712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_144331019_144403122_144403185_144421877_144421971_144423548_144423627_144423985_144424079_144426286_144426460_144428777_144428894_144429580
transcript_124035.known	chr6	-	3129	4	FSM	ENSG00000112425.16	ENST00000367519.9	3129	4	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	2.86744175568088	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGTACAGGATTTTT	7	True	NA	-1	True	AATAAA	-15	NA	145735520	145625304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_145627694_145635244_145635487_145686121_145686297_145735197
transcript_12404.known	chr1	-	7905	6	FSM	ENSG00000169905.13	ENST00000367612.7	7905	6	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	30.4276190327143	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGACTGATTCTTGATTAA	3	True	NA	-4	True	AATAAA	-23	NA	179877799	179839966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_179846829_179847534_179847637_179850844_179851364_179852631_179852812_179877238_179877374_179877692
transcript_124046.nic	chr6	-	1712	10	ISM	ENSG00000146414.17	ENST00000519632.5	5245	24	19	26503	-15	1944	5prime_fragment	FALSE	canonical	3	20	junction_8	15.9891938817332	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCATTTATCAATCCC	40	False	NA	NA	False	AGTAAA	-41	NA	145964404	145943615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145954854_145955186_145955355_145964156
transcript_124052.known	chr6	-	7596	30	FSM	ENSG00000146414.17	ENST00000275233.12	7596	30	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_29	18.0697551814812	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGAATTCTTTGATTTC	-3	True	NA	NA	False	AATAAA	-21	NA	145964358	145884806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145963730
transcript_124053.nic	chr6	-	2108	9	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	-78	58809	-44	1944	5prime_fragment	FALSE	canonical	3	39	junction_8	9.81070843517429	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCATTTATCAATCCC	NA	False	NA	NA	False	AGTAAA	-41	NA	145964467	145943615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145964156
transcript_12406.nnic	chr1	-	1381	6	NNC	ENSG00000169905.13	novel	8319	7	NA	NA	-7	-7629	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_5	16.7332005306815	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAGAAATTAAAGAGAA	-8	True	NA	4	True	NA	NA	NA	179877810	179847604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179847637_179850844_179851364_179852631_179852812_179856057_179856171_179865435_179865855_179877692
transcript_124067.nic	chr6	-	838	2	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	-78	70021	-44	-9268	5prime_fragment	FALSE	canonical	3	39	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCGATGAGTATTTGTGA	NA	False	NA	NA	False	NA	NA	NA	145964467	145954827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_145955355_145964156
transcript_124069.known	chr6	+	2881	3	FSM	ENSG00000235652.10	ENST00000658327.1	2881	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAGTTGGAAATAA	-7	True	NA	NA	False	NA	NA	NA	145814894	145873177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_145815432_145828360_145828457_145870929
transcript_12407.nnic	chr1	-	1097	6	NNC	ENSG00000169905.13	novel	8319	7	NA	NA	-7	-7629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	34.6444800798049	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAGAAATTAAAGAGAA	-8	True	NA	4	True	NA	NA	NA	179877810	179847604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179847637_179850844_179851364_179852631_179852812_179856057_179856171_179877238_179877374_179877692
transcript_124070.known	chr6	-	9051	3	FSM	ENSG00000118496.5	ENST00000237281.5	9051	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	19	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTATGCTTTTGTATT	-15	True	NA	NA	False	AATAAA	-16	NA	145814795	145793501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_145800310_145804371_145806422_145814602
transcript_124072.known	chr6	+	1065	3	FSM	ENSG00000118508.5	ENST00000367495.4	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	13	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATGGTCATTTTGAGT	-11	True	NA	21	True	AATAAA	-13	NA	146543832	146554953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_146544122_146549463_146549742_146554455
transcript_124074.nic	chr6	-	1493	3	ISM	ENSG00000233452.8	ENST00000367477.7	2927	11	-30	329407	-30	-210130	5prime_fragment	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTATCCATCAGAGTAATC	NA	False	NA	NA	False	NA	NA	NA	147204644	147172520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_147173648_147173814_147173949_147204412
transcript_124075.known	chr6	+	406	3	FSM	ENSG00000227681.5	ENST00000432506.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTGTTTCAGTACATA	29	False	NA	NA	False	AATAAA	-37	NA	147660736	147737556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_147660820_147733728_147733812_147737316
transcript_124077.known	chr6	+	4496	8	FSM	ENSG00000111962.8	ENST00000367463.5	4496	8	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	32.5739347406756	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGCATTCCTTAACTT	-16	True	NA	4	True	AATAAA	-17	NA	148747029	149076990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_148747678_148886985_148887030_148941278_148941435_148953871_148953952_148964409_148964564_149019138_149019237_149021323_149021482_149073832
transcript_124084.known	chr6	-	2475	13	FSM	ENSG00000131013.4	ENST00000253329.3	2475	13	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	37.0828651655841	612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTAGTTTTTTTTTC	-18	True	NA	NA	False	NA	NA	NA	149546043	149504494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_124085.known	chr6	+	1943	8	FSM	ENSG00000055211.14	ENST00000367419.10	1943	8	0	0	0	0	multi-exon	TRUE	canonical	3	247	junction_6	12.1873135778521	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCTGTTTTGGTTACA	4	True	NA	28	True	AATAAA	-29	NA	149566374	149591748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149566535_149572284_149572345_149572506_149572604_149578821_149578974_149579833_149579991_149580592_149580724_149582439_149582604_149590726
transcript_124091.known	chr6	-	1898	11	FSM	ENSG00000186625.14	ENST00000367411.7	1898	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	19.7142080743813	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-4	True	NA	-8	True	AATAAA	-23	NA	149648714	149594872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_124096.nnic	chr6	-	1786	10	NIC	ENSG00000186625.14	novel	1898	11	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_9	54.9059802450213	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-19	True	NA	-8	True	AATAAA	-23	NA	149648777	149594872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149648468
transcript_124110.known	chr6	-	1138	7	FSM	ENSG00000186625.14	ENST00000444282.5	1138	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	12.0646407139026	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGAGGAGAATCTGAGA	7	True	NA	NA	False	NA	NA	NA	149648751	149601639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_124115.known	chr6	+	460	1	FSM	ENSG00000220848.5	ENST00000482817.1	460	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	44	False	NA	NA	False	NA	NA	NA	149594083	149594543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149594100_149594500
transcript_124117.known	chr6	-	2567	4	FSM	ENSG00000131023.13	ENST00000392273.7	2567	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	11.0855260988773	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGCATTTTATTTTAGT	8290	False	149718117	-12	True	AATAAA	-18	NA	149718105	149682918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149684593_149695073_149695222_149701778_149702267_149717848
transcript_124142.known	chr6	-	3831	8	FSM	ENSG00000120253.14	ENST00000340413.7	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	23.279140176281	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTATCTGTCTTAT	-3	True	NA	-1	True	AATAAA	-26	NA	149746529	149724314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149727199_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
transcript_124148.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000367380.9	1628	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	711.432357993365	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	NA	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149749957_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_12415.nic	chr1	-	984	5	ISM	ENSG00000169905.13	ENST00000367612.7	7905	6	-11	7638	-7	-7629	5prime_fragment	FALSE	canonical	3	8	junction_3	33.9926462635671	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAGAAATTAAAGAGAA	-8	True	NA	4	True	NA	NA	NA	179877810	179847604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_179847637_179850844_179851364_179852631_179852812_179877238_179877374_179877692
transcript_124160.known	chr6	-	904	5	FSM	ENSG00000203722.8	ENST00000367361.6	904	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTCCCTGGGCCCAGCT	91	False	NA	NA	False	NA	NA	NA	149923010	149916912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149917075_149918173_149918285_149919042_149919325_149919552_149919817_149922925
transcript_124161.known	chr6	-	1150	5	FSM	ENSG00000203722.8	ENST00000367360.7	1150	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.707106781186548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTTGTGTCTTTAT	-20	True	NA	NA	False	NA	NA	NA	149923121	149916877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149917075_149918173_149918385_149919042_149919325_149919552_149919817_149922925
transcript_124166.known	chr6	+	1686	8	FSM	ENSG00000120265.19	ENST00000464889.7	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	469.535767258144	2276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTTTTTGAATAT	-12	True	NA	NA	False	AATAAA	-18	NA	149749740	149811419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_124167.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000544496.5	1628	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	690.55889200946	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	NA	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_124168.known	chr6	+	3211	5	FSM	ENSG00000111981.5	ENST00000229708.4	3211	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.11803398874989	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTTCCATCTTGTTCT	0	True	NA	NA	False	ATTAAA	-21	NA	149963942	149973715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149964135_149968606_149968871_149969084_149969361_149970015_149970148_149971368
transcript_124169.known	chr6	-	1883	4	FSM	ENSG00000218358.3	ENST00000533735.2	1905	4	22	0	13	0	multi-exon	FALSE	canonical	2	4	junction_3	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATTGACTTTGGAATTT	63	False	NA	NA	False	AATAAA	-20	NA	150005144	149998018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149998885_150000065_150000195_150000852_150001669_150005072
transcript_124170.known	chr6	-	3111	5	FSM	ENSG00000131019.11	ENST00000367339.7	3111	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.29903810567666	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGATTTCCATTTCCAT	1	True	NA	NA	False	ATTAAA	-19	NA	150069121	150061052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_150063352_150064584_150064714_150065397_150065674_150065898_150066163_150068978
transcript_124175.nic	chr6	+	880	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	153.792996310904	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	533	False	NA	34	True	ATTAAA	-40	NA	150866473	150899021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150898859
transcript_124176.nic	chr6	+	877	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	158.949998555572	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	533	False	NA	34	True	ATTAAA	-40	NA	150866473	150899021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
transcript_124182.known	chr6	+	405	1	FSM	ENSG00000219747.1	ENST00000405720.1	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCGTGTGCACATTTT	66	False	NA	NA	False	AAGAAA	-9	NA	151099528	151099933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151099500_151099900
transcript_124183.known	chr6	-	398	1	FSM	ENSG00000213087.3	ENST00000440335.1	398	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	81	False	NA	NA	False	AAGAAA	-4	NA	151225947	151225549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151225500_151225900
transcript_124184.nic	chr6	+	860	2	ISM	ENSG00000131016.17	ENST00000354675.10	6287	3	-183	7584	-183	3	5prime_fragment	FALSE	canonical	3	10	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAGGAGAAGAGAAACA	-6	True	NA	4	True	NA	NA	NA	151325504	151349189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_151325886_151348710
transcript_124187.nic	chr6	+	2031	2	ISM	ENSG00000131016.17	ENST00000354675.10	6287	3	-183	6413	-183	1174	5prime_fragment	FALSE	canonical	3	10	junction_1	0	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGGGAGCGTGGAAGAG	-6	True	NA	NA	False	AAGAAA	-1	NA	151325504	151350360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_151325886_151348710
transcript_124192.known	chr6	-	1340	11	FSM	ENSG00000155906.20	ENST00000622845.5	1340	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	56.8527923676577	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAATAAAATAAATAAA	-28	True	NA	-49	True	NA	NA	NA	151452158	151404883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151452015
transcript_124194.nic	chr6	-	1396	11	NIC	ENSG00000155906.20	novel	1340	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	74.0394489444647	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGGTGATCATTTAAT	-28	True	NA	-19	True	AATAAA	-27	NA	151452158	151404853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436419_151436555_151452015
transcript_12420.nnic	chr1	-	837	4	NNC	ENSG00000169905.13	novel	7067	3	NA	NA	-7	1208	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42.4970587217516	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTGTATGCTTTATAT	-8	True	NA	NA	False	AATAAA	-13	NA	179877810	179857821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179857987_179865435_179865855_179877238_179877374_179877692
transcript_124204.known	chr6	-	2166	10	FSM	ENSG00000155906.20	ENST00000684715.1	2166	10	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	20.3960780543711	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCCGTCTCAAAA	-16	True	NA	NA	False	NA	NA	NA	151452146	151416457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_124205.known	chr6	-	1948	12	FSM	ENSG00000155906.20	ENST00000444024.3	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_8	21.4734123514762	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTATCTACATCACT	4	True	NA	-1	True	AATAAA	-16	NA	151452126	151404761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_124206.known	chr6	-	2276	11	FSM	ENSG00000155906.20	ENST00000684658.1	2276	11	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	55.2959311342164	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCTATACCTAAATAAATA	-16	True	NA	NA	False	NA	NA	NA	151452146	151407969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151408901_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_124207.known	chr6	-	841	3	FSM	ENSG00000155906.20	ENST00000491268.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	12.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATTTATAGGATCATTA	112	False	NA	NA	False	ATTAAA	-44	NA	151452018	151436234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151436555_151445307_151445826_151452015
transcript_124208.known	chr6	-	915	2	FSM	ENSG00000155906.20	ENST00000643564.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAATTCTTCATCAAGT	4	True	NA	NA	False	AATAAA	-16	NA	151452074	151444969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151445826_151452015
transcript_124209.known	chr6	-	1773	11	FSM	ENSG00000155906.20	ENST00000646926.2	1773	11	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	60.4318624568199	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTCAGTCTCAAAAATAA	-25	True	NA	-66	True	NA	NA	NA	151452155	151404900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_124212.known	chr6	+	2397	5	FSM	ENSG00000146476.11	ENST00000367294.4	2397	5	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_4	58.0624663616695	1758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTTTTATTTTCT	-30	True	NA	17	True	AATAAA	-18	NA	151452465	151470101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452_151464619_151468342
transcript_124219.known	chr6	+	712	4	FSM	ENSG00000146476.11	ENST00000494826.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	461.598189867431	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGGATTTGAGCTTG	-10	True	NA	NA	False	AAAAAG	-32	NA	151452485	151468542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151452587_151458327_151458573_151464452_151464619_151468342
transcript_124221.known	chr6	+	5306	11	FSM	ENSG00000120262.10	ENST00000239374.8	5306	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.03315017762062	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTTGTTGGATTTCCCT	-26	True	NA	NA	False	AATAAA	-28	NA	151494016	151621193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151494186_151536317_151536447_151538044_151538302_151544571_151544717_151548303_151548490_151573173_151573492_151585888_151586090_151593106_151593281_151596334_151596578_151615442_151615680_151617946
transcript_124225.known	chr6	-	647	4	FSM	ENSG00000131018.25	ENST00000537033.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTCTACGAAGATGGAG	-9	True	NA	NA	False	NA	NA	NA	152302136	152293679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152293750_152293959_152294128_152300640_152300782_152301868
transcript_124228.nnic	chr6	+	990	2	NNC	ENSG00000120279.7	novel	3030	2	NA	NA	-14607	-699	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGATTACAATCCTCA	NA	False	NA	NA	False	ATTAAA	-17	NA	152683289	152722585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_152683436_152721741
transcript_124229.nnic	chr6	+	1044	2	NNC	ENSG00000120279.7	novel	3030	2	NA	NA	-14607	-645	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTGTCACTTTAAAGA	NA	False	NA	NA	False	AAAAAG	-11	NA	152683289	152722639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_152683436_152721741
transcript_124233.known	chr6	-	3514	6	FSM	ENSG00000112031.16	ENST00000485512.5	3514	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	81.6612515211468	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
transcript_124234.known	chr6	-	3539	6	FSM	ENSG00000112031.16	ENST00000367231.9	3539	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	73.4177090353547	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	17	True	NA	-108	True	AATAAA	-33	NA	153002685	152987361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152990096_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
transcript_124236.known	chr6	-	2054	5	FSM	ENSG00000112029.10	ENST00000229758.8	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	27.8242250565941	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAGCTTAATGTATACC	4	True	NA	NA	False	AATAAA	-16	NA	152983041	152970534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152982856
transcript_124237.known	chr6	-	2221	5	FSM	ENSG00000112029.10	ENST00000367241.3	2221	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	145.53070981755	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAATGTATACCTTTTAT	1	True	NA	NA	False	AATAAA	-22	NA	152983579	152970528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152983233
transcript_124238.known	chr6	+	2090	3	FSM	ENSG00000227627.4	ENST00000637995.1	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGCGGTGGCTCACA	-3	True	NA	NA	False	ATTAAA	-6	NA	152983330	152990541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_152983488_152987955_152988023_152988675
transcript_124239.known	chr6	+	663	3	FSM	ENSG00000227627.4	ENST00000442269.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAATTATCCCTGTTCA	28	True	NA	NA	False	NA	NA	NA	152983749	152989223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_152983806_152987955_152988015_152988675
transcript_124241.known	chr6	+	3246	3	FSM	ENSG00000227627.4	ENST00000671635.1	3246	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTGTTACGAGAATT	-3	True	NA	NA	False	NA	NA	NA	152983718	152991322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_152984251_152987955_152988023_152988675
transcript_124242.known	chr6	-	447	2	FSM	ENSG00000112031.16	ENST00000482526.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGGTCCTGTTTTC	251	False	NA	NA	False	AATAAA	-20	NA	153002536	152998292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152998630_153002426
transcript_124248.known	chr6	-	7932	5	FSM	ENSG00000091844.8	ENST00000206262.2	7932	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	4.81534007106456	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGAAAGTTACTGTTT	-23	True	NA	-8	True	AATAAA	-16	NA	153131282	153004458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131123
transcript_124253.nnic	chr6	-	600	4	NNC	ENSG00000091844.8	novel	7773	4	NA	NA	-63	-20540	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	22.1710521977545	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAAGTGCACACAGTGTA	NA	False	NA	NA	False	ATTAAA	-16	NA	153131345	153024998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_153025143_153026453_153026544_153043899_153044044_153131123
transcript_124259.known	chr6	-	447	1	FSM	ENSG00000218426.5	ENST00000492974.2	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGCATGGAGGGAGTTTC	19	False	NA	-51	True	NA	NA	NA	153282733	153282286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_153282300_153282700
transcript_12426.nnic	chr1	-	418	3	NNC	ENSG00000169905.13	novel	7905	6	NA	NA	-7	1208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	51.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTGTATGCTTTATAT	-8	True	NA	NA	False	AATAAA	-13	NA	179877810	179857821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179857987_179877238_179877374_179877692
transcript_124260.known	chr6	-	2700	22	FSM	ENSG00000288520.1	ENST00000673182.1	2700	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	16.1005908259079	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAAGTCAGGGTTTTCTC	569	False	NA	NA	False	AAGAAA	-37	NA	154510114	154159827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_154160041_154167919_154168114_154199667_154200041_154212769_154212856_154214217_154214277_154221256_154221329_154223169_154223244_154246590_154246761_154247448_154247486_154265911_154265965_154410342_154410433_154410933_154411143_154414298_154414424_154422505_154422653_154422914_154422984_154428127_154428188_154430471_154430592_154433465_154433508_154441291_154441380_154442087_154442291_154450094_154450259_154510062
transcript_124261.known	chr6	+	1161	2	FSM	ENSG00000287260.1	ENST00000658375.1	1161	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTTGATGAGTTTACCA	0	True	NA	NA	False	AATAAA	-23	NA	154510790	154522307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_154510963_154521318
transcript_124265.known	chr6	+	3275	21	FSM	ENSG00000146426.19	ENST00000456877.6	3275	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.7626305625051	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACTGTTCATT	887	False	NA	NA	False	TTTAAA	-33	NA	155149108	155257200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_155149227_155164414_155164601_155165262_155165410_155176815_155176978_155179038_155179144_155179377_155179457_155182225_155182319_155183236_155183501_155211203_155211308_155240529_155240710_155244010_155244080_155244657_155244784_155245622_155245732_155247999_155248180_155249850_155249970_155250912_155251022_155251944_155252004_155252947_155253054_155253972_155254061_155254418_155254574_155256483
transcript_124267.known	chr6	+	877	3	FSM	ENSG00000146426.19	ENST00000535583.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTGAGGTACTCACCTA	-22	True	NA	NA	False	NA	NA	NA	155121915	155129810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_155122089_155127489_155127601_155129217
transcript_12427.nnic	chr1	-	574	3	NNC	ENSG00000169905.13	novel	7067	3	NA	NA	-7	2624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	51.5	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGAAGACTAGTTAGT	-8	True	NA	-13	True	AATAAA	-18	NA	179877810	179862440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179862851_179877327_179877374_179877692
transcript_124271.nic	chr6	-	1208	7	NIC	ENSG00000029639.11	novel	2799	7	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	213.977932403217	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTTTAATATATACT	106	False	NA	NA	False	AATAAA	-26	NA	155314586	155257652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_155257909_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_124274.known	chr6	-	2799	7	FSM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_4	40.0946796138008	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGCTTTGTAATTTG	-5	True	NA	-2	True	AATAAA	-20	NA	155314484	155256133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_155258083_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_12430.known	chr1	-	7067	3	FSM	ENSG00000169905.13	ENST00000482587.5	7067	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	16.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACTGTCATACATTTG	3	True	NA	-11	True	AATAAA	-37	NA	179877799	179859029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_179865855_179877238_179877374_179877692
transcript_124302.known	chr6	-	433	3	FSM	ENSG00000029639.11	ENST00000470239.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	332	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAGATACAGTACAA	-5	True	NA	NA	False	AATAAA	-6	NA	155314484	155257672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_155257909_155311331_155311340_155314295
transcript_124304.known	chr6	-	649	2	FSM	ENSG00000029639.11	ENST00000480390.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCCAGTAATGACTCATT	29	True	NA	NA	False	AATAAA	-13	NA	155314450	155310845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_155311340_155314295
transcript_124307.known	chr6	+	8853	4	FSM	ENSG00000049618.24	ENST00000636748.1	8853	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	29.044027881056	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGTATGGAAGAAACAATT	29	False	NA	NA	False	AATAAA	-14	NA	156779399	156943901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_156779472_156829226_156829422_156901375_156901526_156935465
transcript_124309.known	chr6	-	129	1	FSM	ENSG00000270487.1	ENST00000604792.1	129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACTGGTCTGCTATCT	-3	True	NA	NA	False	AATAAA	-35	NA	156780455	156780326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_156780300_156780500
transcript_124310.known	chr6	+	378	2	FSM	ENSG00000218596.2	ENST00000406202.2	378	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATTTACA	662	False	NA	NA	False	AAAACA	-35	NA	156976293	156977072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_156976414_156976814
transcript_124319.known	chr6	-	4322	4	FSM	ENSG00000215712.11	ENST00000400788.9	4322	4	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	8.64098759787715	1402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGATAAAGCTCATTCTT	1	True	NA	NA	False	ATTAAA	-15	NA	157323519	157289024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_157293000_157318781_157318920_157322704_157322806_157323411
transcript_124324.known	chr6	-	3936	17	FSM	ENSG00000122335.17	ENST00000647468.2	3936	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.8262155823408	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTTTCATTGTACAA	-5	True	NA	-21	True	AATAAA	-15	NA	158168262	158109518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_124326.known	chr6	-	2729	16	FSM	ENSG00000122335.17	ENST00000642244.1	2729	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	23.5792752692321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCAATTCTTAGTATCAA	11	True	NA	NA	False	AGTAAA	-24	NA	158168246	158110619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_12433.known	chr1	-	888	2	FSM	ENSG00000169905.13	ENST00000495650.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTAGACCGTATTAAC	5221	False	NA	NA	False	AATGAA	-11	NA	179877790	179865064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_179865855_179877692
transcript_124330.known	chr6	-	2022	15	FSM	ENSG00000122335.17	ENST00000642903.1	2022	15	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	9.46017430913319	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGCATTGTAATAATT	-23	True	NA	NA	False	NA	NA	NA	158168280	158114592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_124331.known	chr6	-	1993	14	FSM	ENSG00000122335.17	ENST00000646562.1	1993	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	21.8298964426821	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATAATGTTTTGCTTTTA	27	True	NA	NA	False	NA	NA	NA	158168230	158114534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158158272_158158365_158168139
transcript_124333.nic	chr6	-	1497	6	ISM	ENSG00000122335.17	ENST00000367101.5	1907	16	-27	31189	-6	0	5prime_fragment	FALSE	canonical	3	75	junction_3	6.85273667960473	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATATCTTCTCTGGTTAT	-29	True	NA	NA	False	AATAAA	-17	NA	158168286	158145919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_124336.nic	chr6	-	1003	6	ISM	ENSG00000122335.17	ENST00000367101.5	1907	16	-27	31683	-6	456	5prime_fragment	FALSE	canonical	3	75	junction_3	6.85273667960473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGACAA	-29	True	NA	NA	False	NA	NA	NA	158168286	158146413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_124339.nic	chr6	-	647	2	ISM	ENSG00000122335.17	ENST00000648111.1	3949	19	8	52092	-1	-14757	5prime_fragment	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAATACAAGTTGTTTG	-3	True	NA	NA	False	NA	NA	NA	158168260	158161626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_158162153_158168139
transcript_124341.known	chr6	+	1102	4	FSM	ENSG00000272047.4	ENST00000648328.1	1102	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	308.063124844388	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAACAGAGAGACCCTG	-6	True	NA	NA	False	AAAACA	-17	NA	158168349	158192881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158168396_158170469_158170539_158187039_158187122_158191976
transcript_124345.known	chr6	+	7483	3	FSM	ENSG00000272047.4	ENST00000607778.2	7483	3	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	110.5	2970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCACAGCCTGTTTT	-6	True	NA	NA	False	AATAAA	-17	NA	158168349	158199344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158168396_158170469_158170539_158191976
transcript_124352.nnic	chr6	+	521	3	NNC	ENSG00000130338.13	novel	424	2	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAGAAGAAAAAAA	-32	True	NA	NA	False	AAGAAA	-3	NA	158232206	158312358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_158232304_158282262_158282379_158312050
transcript_124354.known	chr6	+	680	2	FSM	ENSG00000130338.13	ENST00000620026.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATTTATTATTCCCC	-3	True	NA	NA	False	AATGAA	-40	NA	158232235	158312662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158232304_158312050
transcript_124356.known	chr6	+	424	2	FSM	ENSG00000130338.13	ENST00000432358.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAGAAGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-3	NA	158282262	158312358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158282379_158312050
transcript_124357.known	chr6	+	11318	14	FSM	ENSG00000130338.13	ENST00000367097.8	11318	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_13	20.8910954672675	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGTGCAGAATTCTTGA	0	True	NA	NA	False	AATAAA	-19	NA	158312464	158511828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158314269_158413064_158413194_158429735_158429898_158448995_158449177_158452133_158452269_158461562_158461730_158479750_158479976_158481054_158481290_158489587_158489733_158493572_158493718_158494752_158494847_158498668_158498813_158501677_158504179_158506577
transcript_124358.known	chr6	+	5390	17	FSM	ENSG00000146433.10	ENST00000367090.4	5390	17	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	22.6187836764049	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTATGTGTCTTGATTT	28	False	NA	17	True	AATAAA	-13	NA	158536435	158635428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158536866_158573419_158573524_158580939_158580996_158583953_158584045_158585303_158585426_158589671_158589783_158605266_158605348_158607243_158607344_158608332_158608464_158608658_158608751_158623549_158623608_158625103_158625207_158625702_158625755_158628407_158628491_158629729_158629820_158631322_158631390_158631809
transcript_124363.nnic	chr6	+	1039	2	NNC	ENSG00000146433.10	novel	5390	17	NA	NA	212	-82382	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGTGGTGTGTGCCTGT	-21	True	NA	NA	False	ATTAAA	-12	NA	158536647	158553046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_158536866_158552225
transcript_12437.nic	chr1	-	503	2	ISM	ENSG00000169905.13	ENST00000483123.1	2687	3	-38	3283	-7	-3283	5prime_fragment	FALSE	canonical	3	103	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGTGCTAAAAAGGGCAAA	-8	True	NA	NA	False	NA	NA	NA	179877810	179876988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_179877374_179877692
transcript_124371.known	chr6	-	730	5	FSM	ENSG00000146425.11	ENST00000367089.8	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	1709	junction_4	137.823256382949	17177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-7	True	NA	-3	True	AATAAA	-16	NA	158644743	158636473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158636898_158637127_158637206_158637770_158637895_158641318_158641361_158644681
transcript_124372.nnic	chr6	+	1401	8	NNC	ENSG00000164674.17	novel	2497	19	NA	NA	80475	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.66598625567009	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGTGCTTATCAAATGA	7739	False	NA	NA	False	AATAAA	-17	NA	158730528	158764871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_158730685_158745479_158745659_158751927_158752031_158757210_158757382_158760639_158760746_158762075_158762179_158763303_158763510_158764494
transcript_124378.known	chr6	-	3068	13	FSM	ENSG00000092820.19	ENST00000337147.11	3068	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1135.84684511406	6926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGGTGTGTGCTTGTGT	6	True	NA	-3	True	AATAAA	-23	NA	158818227	158765740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081
transcript_124379.known	chr6	-	3052	14	FSM	ENSG00000092820.19	ENST00000367075.4	3052	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1096.46204034484	8162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCACGGGTGTGTG	0	True	NA	-10	True	AATAAA	-16	NA	158819368	158765747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_124380.known	chr6	+	735	4	FSM	ENSG00000203711.15	ENST00000659187.1	735	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCTTTGCAAGGAAGC	39	False	NA	NA	False	AATAAA	-19	NA	158869854	158910350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158869966_158873527_158873622_158895220_158895367_158909966
transcript_124381.known	chr6	+	715	4	FSM	ENSG00000203711.15	ENST00000663950.1	715	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTGCTTTGCAAGGA	51	False	NA	NA	False	AATAAA	-16	NA	158869866	158910347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158869966_158873527_158873622_158895225_158895367_158909966
transcript_124382.known	chr6	+	980	4	FSM	ENSG00000203711.15	ENST00000650421.2	1135	4	106	49	19	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	63	False	NA	NA	False	AATAAA	-22	NA	158869957	158910353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158873527_158873622_158895220_158895367_158909966
transcript_124383.known	chr6	+	944	4	FSM	ENSG00000203711.15	ENST00000367073.7	1034	4	88	2	48	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	3	True	NA	NA	False	AATAAA	-20	NA	158869986	158910351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158873527_158873622_158895225_158895367_158909966
transcript_124385.known	chr6	+	699	4	FSM	ENSG00000203711.15	ENST00000663340.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	4	True	NA	NA	False	AATAAA	-20	NA	158869898	158910351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158869978_158873527_158873622_158895225_158895367_158909966
transcript_124387.known	chr6	+	975	3	FSM	ENSG00000203711.15	ENST00000655791.1	975	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	51	False	NA	NA	False	AATAAA	-20	NA	158869866	158910351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158895220_158895367_158909966
transcript_124388.known	chr6	+	985	3	FSM	ENSG00000203711.15	ENST00000653976.1	985	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	38	False	NA	NA	False	AATAAA	-22	NA	158869853	158910353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158895225_158895367_158909966
transcript_124389.known	chr6	+	1020	4	FSM	ENSG00000203711.15	ENST00000658761.1	1020	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTGCTTTGCAAGGA	15	False	NA	NA	False	AATAAA	-16	NA	158869909	158910347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158873529_158873622_158895220_158895367_158909966
transcript_12439.known	chr1	+	3397	10	FSM	ENSG00000143337.19	ENST00000435319.8	3397	10	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	23.3428552000155	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTTATAAACTTAATGA	-4	True	NA	13	True	AATAAA	-26	NA	179882695	179920077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_179882978_179884691_179884770_179889312_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997_179914055_179917451
transcript_124390.known	chr6	+	648	3	FSM	ENSG00000203711.15	ENST00000486232.2	648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	35	False	NA	NA	False	AATAAA	-22	NA	158869850	158910353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158869966_158895220_158895367_158909966
transcript_124393.known	chr6	-	6576	8	FSM	ENSG00000130363.13	ENST00000367069.7	6576	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	4.89481191400338	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTCTGTTTTTCATAA	-4	True	NA	-2	True	AATAAA	-17	NA	159000202	158972870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158977849_158978259_158978347_158980773_158980937_158982484_158982689_158983661_158983808_158986279_158986422_158993838_158993927_158999434
transcript_124397.nic	chr6	-	1867	5	ISM	ENSG00000130363.13	ENST00000367069.7	6576	8	377	8718	-44	-4755	5prime_fragment	FALSE	canonical	3	15	junction_3	5.3619026473818	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCGTGAAGTCTTTATCAAA	-31	True	NA	NA	False	AATAAA	-15	NA	158999825	158981588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_158982689_158983661_158983808_158986279_158986422_158993838_158993927_158999434
transcript_124399.known	chr6	+	1296	3	FSM	ENSG00000271913.8	ENST00000659171.1	1296	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGTCCTGCAGGAACA	-19	True	NA	NA	False	AATATA	-29	NA	158999860	159028296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158999911_159025948_159026042_159027143
transcript_124402.known	chr6	+	1774	3	FSM	ENSG00000271913.8	ENST00000667828.1	1774	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATAGACATATTTAAAA	43	False	NA	NA	False	NA	NA	NA	158999922	159028354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159000393_159025948_159026042_159027143
transcript_124405.known	chr6	+	464	2	FSM	ENSG00000271913.8	ENST00000665423.1	464	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTGTTGAATTTTTTT	-31	True	NA	NA	False	AATAAA	-17	NA	159000234	159020390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159000393_159020084
transcript_124406.nic	chr6	-	2231	2	ISM	ENSG00000130363.13	ENST00000449822.5	1904	6	-422	15631	-1	-15631	5prime_fragment	FALSE	canonical	3	29	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACCCCACAAAAATT	-5	True	NA	NA	False	NA	NA	NA	159000203	158992464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_158993927_158999434
transcript_124408.known	chr6	+	6548	23	FSM	ENSG00000164694.17	ENST00000297267.14	6548	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.949118773537323	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTGTGTGGGAATTTT	1	True	NA	NA	False	ATTAAA	-29	NA	159169399	159272108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159169706_159197430_159197626_159199995_159200083_159200512_159200582_159214944_159215152_159221597_159221697_159223527_159223646_159225534_159225723_159226472_159226581_159229814_159230004_159231881_159234480_159236214_159236316_159238553_159238666_159239516_159239958_159246900_159246970_159249038_159249183_159251301_159251533_159256522_159256632_159261189_159261270_159264974_159265005_159266083_159266246_159267803_159267927_159271326
transcript_124411.known	chr6	-	1878	11	FSM	ENSG00000120438.12	ENST00000392168.6	1878	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	696.894224398509	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTACACATTAAAGTAA	NA	False	NA	-73	True	NA	NA	NA	159789703	159778986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159789404
transcript_124426.known	chr6	+	3656	8	FSM	ENSG00000146457.16	ENST00000358372.8	3656	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	218.044369197591	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	8545	False	NA	15	True	AATAAA	-23	NA	159725584	159756319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
transcript_124430.known	chr6	-	1403	8	FSM	ENSG00000120438.12	ENST00000544255.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	1021.95393082795	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGTAAACTTGGGTT	-1	True	NA	-50	True	ATTAAA	-8	NA	159789596	159778963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159787742_159787872_159789404
transcript_124432.known	chr6	+	1623	7	FSM	ENSG00000146457.16	ENST00000614346.4	1623	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	217.154834673839	2876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTGGTTTTTTTTTT	1	True	NA	13	True	ATTAAA	-15	NA	159726997	159749416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
transcript_124437.known	chr6	+	3280	8	FSM	ENSG00000146457.16	ENST00000650096.1	3280	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	232.450301908048	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTGGTTTTTTTTTG	-1	True	NA	NA	False	NA	NA	NA	159726995	159755713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159750011_159753459_159753615_159755027
transcript_12444.known	chr1	-	989	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATCCATTATTTTTA	416	False	NA	NA	False	ATTAAA	-20	NA	179882595	179881606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_179881600_179882600
transcript_124442.known	chr6	-	990	6	FSM	ENSG00000112096.19	ENST00000367055.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	156.641501524979	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTTCACTGAGTTTC	8	True	NA	43	True	TTTAAA	-16	NA	159693234	159679063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_124451.known	chr6	-	815	5	FSM	ENSG00000112096.19	ENST00000367054.6	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	217.492959656169	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTGCATTATGCTTGC	1207	False	NA	-9	True	AATAAA	-21	NA	159693228	159679115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159692660_159692864_159693144
transcript_124455.known	chr6	-	14167	5	FSM	ENSG00000112096.19	ENST00000538183.7	14167	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	26.042033330752	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTATTTACTTCTTGA	1	True	NA	NA	False	AATAAA	-14	NA	159693241	159669068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_124463.known	chr6	-	991	4	FSM	ENSG00000112096.19	ENST00000337404.8	991	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	221.956452185258	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTTATAGAAAA	1157	False	NA	NA	False	NA	NA	NA	159693278	159682164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159682639_159684853_159685034_159692660_159692864_159693144
transcript_124468.known	chr6	-	1718	2	FSM	ENSG00000285427.1	ENST00000535372.1	1718	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGACATATTGAAACCAAA	NA	False	NA	NA	False	AATAAA	-26	NA	159762332	159760257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159761637_159761993
transcript_124470.known	chr6	-	2352	12	FSM	ENSG00000120438.12	ENST00000321394.12	2352	12	0	0	0	0	multi-exon	FALSE	canonical	3	2104	junction_11	137.741103415966	5770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTATCTTACCTCG	-7	True	NA	-14	True	AATAAA	-23	NA	159789602	159778497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159788057_159788144_159789404
transcript_124471.known	chr6	+	1520	9	FSM	ENSG00000120437.9	ENST00000367048.5	1520	9	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_5	177.607669809049	8293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTAATTTAATAAGATCA	13	True	NA	-23	True	NA	NA	NA	159762044	159779112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159762143_159762918_159763054_159767004_159767187_159768510_159768629_159775169_159775314_159776149_159776273_159777301_159777457_159778169_159778281_159778658
transcript_124472.known	chr6	+	856	5	FSM	ENSG00000120437.9	ENST00000467951.1	856	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	906.287344058164	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGTGAGTATATCATA	19	False	NA	NA	False	NA	NA	NA	159762494	159775307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159762778_159762918_159763054_159767004_159767187_159768510_159768629_159775169
transcript_124473.known	chr6	-	1671	11	FSM	ENSG00000120438.12	ENST00000420894.6	1671	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	674.311419152901	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTACACATTAAAGTAAAG	115	False	NA	-71	True	NA	NA	NA	159789572	159778984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159779262_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159788057_159788144_159789404
transcript_124483.known	chr6	+	758	4	FSM	ENSG00000112110.10	ENST00000476826.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	387.439744419123	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTGGGCTTCAGAAGC	-5	True	NA	-96	True	TTTAAA	-21	NA	159789811	159798313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159789889_159790939_159791127_159797286_159797519_159798051
transcript_124488.nnic	chr6	+	1062	4	NIC	ENSG00000112110.10	novel	758	4	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	223	junction_1	315.827308649662	3338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	-21	True	NA	20	True	AATAAA	-20	NA	159789795	159798429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_159790061_159790939_159791127_159797286_159797519_159798051
transcript_124494.known	chr6	+	970	4	FSM	ENSG00000112110.10	ENST00000367034.5	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	122.901044204948	6458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	-18	True	NA	20	True	AATAAA	-20	NA	159790466	159798429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159790640_159790939_159791127_159797286_159797519_159798051
transcript_124498.known	chr6	+	1075	4	FSM	ENSG00000112110.10	ENST00000480842.1	1075	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	418.538993271701	2378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGACATTGTCTGAG	32	True	NA	27	True	AATAAA	-27	NA	159790516	159798436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159790788_159790939_159791127_159797286_159797519_159798051
transcript_1245.known	chr1	+	863	4	FSM	ENSG00000171735.19	ENST00000476163.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_3	2347.84454340572	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTCACTTGCGTCG	-6	True	NA	9	True	AATAAA	-15	NA	6785463	6888201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6825091_6825211_6871756_6871841_6887653
transcript_12450.known	chr1	-	1293	8	FSM	ENSG00000230124.8	ENST00000367595.4	1293	8	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_4	61.9693801940333	2539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTCTCAGCAATTC	5	True	NA	-20	True	AATAAA	-22	NA	180502577	180288229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_180288518_180314691_180314723_180397515_180397606_180413365_180413472_180430179_180430263_180492268_180492366_180495460_180495526_180502044
transcript_124508.nic	chr6	+	1140	6	ISM	ENSG00000197081.16	ENST00000676781.1	14227	49	111117	21160	-4862	0	internal_fragment	FALSE	canonical	3	354	junction_2	14.8243043681651	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTCTGATCCAGTGGTT	NA	False	NA	NA	False	AGTAAA	-19	NA	160080198	160090344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_160080276_160083949_160084185_160084994_160085132_160088032_160088148_160089106_160089254_160089915
transcript_124511.nnic	chr6	+	667	3	Antisense	novelGene_ENSG00000112499.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACCCTCCTGGGTCTA	NA	False	NA	8	True	AATAAA	-21	NA	160180915	160206000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_160181052_160181492_160181615_160205591
transcript_124514.nnic	chr6	+	341	3	Antisense	novelGene_ENSG00000112499.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTAGCCCTGACGGCCAA	NA	False	NA	NA	False	AATAAA	-20	NA	160252557	160255753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_160252619_160254625_160254811_160255658
transcript_124518.nnic	chr6	-	1272	3	NNC	ENSG00000112499.13	novel	2409	11	NA	NA	11053	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	4	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGATCATTTTTTAGTC	NA	False	NA	NA	False	AATAAA	-23	NA	160234488	160216754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_160217499_160224704_160224805_160234060
transcript_124519.nnic	chr6	-	986	3	NNC	ENSG00000112499.13	novel	2409	11	NA	NA	11118	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	4	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGATCATTTTTTAGTC	NA	False	NA	NA	False	AATAAA	-23	NA	160234423	160216754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_160217499_160224704_160224805_160234281
transcript_12452.known	chr1	+	5844	6	FSM	ENSG00000121454.6	ENST00000263726.4	5844	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.06939798987516	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGATGTGTCTTGCTTTT	-11	True	NA	10	True	AATAAA	-18	NA	180230263	180278984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_180230606_180248284_180248457_180266391_180266595_180271379_180271535_180271834_180272007_180274184
transcript_124526.known	chr6	+	3234	11	FSM	ENSG00000146477.6	ENST00000275300.3	3234	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	5.58659108938537	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACATTTGCCCTTTCTCT	2	True	NA	18	True	ATTAAA	-19	NA	160348377	160452577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_160348849_160397978_160398083_160407040_160407196_160408752_160408922_160410728_160410847_160436779_160436878_160436996_160437212_160442760_160442870_160443629_160443743_160447718_160447819_160450995
transcript_124533.nnic	chr6	+	1253	3	NNC	ENSG00000220913.1	novel	489	3	NA	NA	-22570	-7305	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	6	65	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGATCTTCCAATCAGTT	NA	False	NA	17	True	AGTAAA	-18	NA	160883199	160906333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_160883784_160898548_160898654_160905769
transcript_124541.nnic	chr6	+	2228	2	Antisense	novelGene_ENSG00000224371.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGAATCTGTTTT	-2	True	NA	NA	False	AAAAAG	-11	NA	160883285	160888224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_160883784_160886494
transcript_124546.known	chr6	-	310	2	FSM	ENSG00000224371.6	ENST00000437861.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATGCATCAGAGTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	160880394	160872887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_160873126_160880322
transcript_124551.nnic	chr6	-	1784	9	NNC	ENSG00000026652.15	novel	7923	9	NA	NA	175	-6095	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	41.0182886039874	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTATGTTGACAT	372	False	NA	-2	True	ATTAAA	-17	NA	161273788	161136073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273696
transcript_124553.known	chr6	-	7923	9	FSM	ENSG00000026652.15	ENST00000320285.9	7923	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	18.9270804668866	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTCTCTACACTGCCT	0	True	NA	5	True	AATAAA	-28	NA	161274061	161129966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273937
transcript_124555.known	chr6	-	7705	8	FSM	ENSG00000026652.15	ENST00000366911.9	7705	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	46.4942392744981	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGAAAAATGCACGTC	-4	True	NA	-7	True	AATAAA	-16	NA	161274025	161129978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161232035_161232303_161273937
transcript_124563.known	chr6	-	942	3	FSM	ENSG00000026652.15	ENST00000366905.3	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	2.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGACATCACCTCTGC	128	False	NA	NA	False	NA	NA	NA	161274032	161165837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_161166418_161232035_161232303_161273937
transcript_124564.known	chr6	-	6072	4	FSM	ENSG00000026652.15	ENST00000624499.2	6072	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	61.0810026840497	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGTGTGGTGGCAG	197	False	NA	NA	False	AATACA	-29	NA	161273963	161160104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_161165714_161166247_161166418_161232035_161232303_161273937
transcript_124565.nic	chr6	-	1150	2	ISM	ENSG00000185345.24	ENST00000674232.1	1108	6	284211	288836	0	105500	internal_fragment	FALSE	canonical	2	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATTTCCAAGGACAAGT	NA	False	NA	NA	False	AATAAA	-5	NA	162443475	162261781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_162262766_162443309
transcript_124566.known	chr6	-	350	2	FSM	ENSG00000185345.24	ENST00000674250.1	350	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATACTTGTAAATTTTAA	-7	True	NA	NA	False	AATAAA	-18	NA	162727771	162624345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_162624586_162727661
transcript_124567.known	chr6	+	581	2	FSM	ENSG00000112530.12	ENST00000544266.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCAAACACACTTGGC	23	True	NA	NA	False	NA	NA	NA	162727999	162814335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_162728392_162814146
transcript_124568.known	chr6	+	9384	8	FSM	ENSG00000112531.17	ENST00000361752.8	9384	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_5	54.5407542810972	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTCTAGATTTCTAGAT	3	True	NA	NA	False	ATTAAA	-20	NA	163414717	163578592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_163415336_163455278_163455422_163478779_163478897_163534981_163535126_163561981_163562070_163563419_163563720_163566720_163566796_163570693
transcript_124576.known	chr6	+	1339	4	FSM	ENSG00000288638.1	ENST00000675059.1	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAGTTATACTGTATTG	0	True	NA	NA	False	AATACA	-17	NA	166168122	166170979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166168151_166168276_166168599_166168689_166168771_166170071
transcript_124578.known	chr6	-	659	9	FSM	ENSG00000198818.10	ENST00000478705.5	659	9	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_8	495.676557847958	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCCCCATAAAACACTC	-21	True	NA	NA	False	NA	NA	NA	166342576	166320155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_12458.known	chr1	+	8484	15	FSM	ENSG00000143324.14	ENST00000367590.9	8484	15	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_12	20.3309355115673	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTGACTGTTTTT	-2	True	NA	60	True	NA	NA	NA	180632021	180890279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180836521_180836717_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_124592.known	chr6	-	2576	8	FSM	ENSG00000198818.10	ENST00000487841.5	2576	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_7	518.075953772756	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCATTTTTAAGATTT	8	True	NA	NA	False	ATTAAA	-20	NA	166342547	166319859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166320257_166322856_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_124610.known	chr6	-	1033	8	FSM	ENSG00000198818.10	ENST00000361731.4	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	1106	junction_4	69.4353318284175	4094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCTGAATCAAATTTA	10	True	NA	-13	True	AATAAA	-20	NA	166342545	166319727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166342418
transcript_124611.known	chr6	+	3871	2	FSM	ENSG00000286760.2	ENST00000659081.2	3910	2	39	0	20	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAATTATGTGGTGCTGA	15	True	NA	NA	False	AATAAA	-15	NA	166342664	166351466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166343148_166348078
transcript_124613.known	chr6	+	3461	2	FSM	ENSG00000286760.2	ENST00000666448.1	3461	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAATCTCACTTGATC	-18	True	NA	NA	False	NA	NA	NA	166342631	166351444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166342727_166348078
transcript_124616.known	chr6	-	1192	5	FSM	ENSG00000060762.19	ENST00000621685.4	1192	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	88.9982443647064	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-1	True	NA	NA	False	AATAAA	-21	NA	166383013	166364918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166365454_166365973_166366107_166366794_166366892_166366968_166367188_166382805
transcript_12462.known	chr1	+	4126	14	FSM	ENSG00000143324.14	ENST00000367589.3	4126	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	43.6764597477254	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	8	True	NA	7	True	AATAAA	-19	NA	180632031	180886126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_124620.known	chr6	-	976	4	FSM	ENSG00000060762.19	ENST00000341756.10	976	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	85.8409381744321	2349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-1	True	NA	NA	False	AATAAA	-21	NA	166383013	166364918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166365454_166365973_166366107_166366794_166366895_166382805
transcript_124627.nic	chr6	-	429	3	ISM	ENSG00000071242.12	ENST00000506565.1	587	8	-127	349871	-127	-347814	5prime_fragment	FALSE	canonical	0	0	junction_2	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACATATGTGTCT	NA	False	NA	-8	True	ATTAAA	-17	NA	166862797	166858093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_166858260_166862107_166862191_166862617
transcript_124629.known	chr6	-	4137	22	FSM	ENSG00000071242.12	ENST00000503859.5	4137	22	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_20	35.2883168502332	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAAAGAA	-1	True	NA	-109	True	NA	NA	NA	166862551	166411231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166412888_166413793_166413932_166418224_166418343_166419881_166419959_166423255_166423418_166430452_166430612_166432400_166432491_166448723_166448850_166451102_166451234_166459448_166459552_166469840_166469906_166488832_166488922_166490670_166490742_166498507_166498651_166500886_166500925_166504505_166504613_166508202_166508283_166510276_166510358_166531231_166531314_166538667_166538785_166858199_166858260_166862107
transcript_124633.nic	chr6	-	964	10	NIC	ENSG00000026297.17	novel	887	10	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	116.595004445853	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	2143	False	NA	NA	False	AAAAAG	-39	NA	166957233	166929515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956096_166956192_166957125
transcript_124634.nnic	chr6	-	1089	10	Fusion	ENSG00000026297.17_ENSG00000227598.1	novel	887	10	NA	NA	-85	0	multi-exon	FALSE	canonical	0	0	junction_6	116.994776711517	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	760	False	NA	NA	False	AAAAAG	-39	NA	166999150	166929515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956096_166956192_166998917
transcript_124637.known	chr6	-	1220	9	FSM	ENSG00000026297.17	ENST00000028008.9	1220	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	95.592805037827	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAACTGCAGCTTTCT	-1	True	NA	NA	False	AAAAAG	-10	NA	166956584	166929544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956096
transcript_124638.nnic	chr6	-	807	9	NNC	ENSG00000026297.17	novel	1220	9	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	122.159475686498	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	3092	False	NA	NA	False	AAAAAG	-39	NA	166956284	166929515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956238
transcript_124639.nnic	chr6	-	975	9	Fusion	ENSG00000026297.17_ENSG00000227598.1	novel	1220	9	NA	NA	-66	0	multi-exon	FALSE	canonical	0	0	junction_6	122.36567890957	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	779	False	NA	NA	False	AAAAAG	-39	NA	166999131	166929515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166998917
transcript_12464.known	chr1	-	4810	8	FSM	ENSG00000135823.14	ENST00000258301.6	4810	8	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	27.2958096507467	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTTGAAAAGGACTGA	25	True	NA	-35	True	AATAAA	-16	NA	181022870	180972724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181002605_181002701_181005293_181005464_181022638
transcript_124640.known	chr6	-	2234	8	FSM	ENSG00000026297.17	ENST00000611959.2	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	73.1333699204294	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCATATTGTCAGC	-18	True	NA	NA	False	NA	NA	NA	166956601	166928487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166956096
transcript_124642.nnic	chr6	-	915	8	Fusion	ENSG00000026297.17_ENSG00000227598.1	novel	2234	8	NA	NA	-66	0	multi-exon	FALSE	canonical	2	6	junction_7	112.57940508361	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	779	False	NA	NA	False	AAAAAG	-39	NA	166999131	166929515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166998917
transcript_124643.known	chr6	-	1961	7	FSM	ENSG00000026297.17	ENST00000620173.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	106.723031982584	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAATCCTTAGAATA	2976	False	NA	NA	False	AATAGA	-37	NA	166956400	166928501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166952487_166952549_166956096
transcript_124647.known	chr6	-	2536	5	FSM	ENSG00000026297.17	ENST00000683770.1	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	128.244639264181	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGACAAGATCTGATTTG	-3	True	NA	NA	False	NA	NA	NA	166956473	166927867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166956096
transcript_124648.nnic	chr6	-	708	5	Fusion	ENSG00000026297.17_ENSG00000227598.1	novel	1924	9	NA	NA	-49	0	multi-exon	FALSE	canonical	1	2	junction_4	133.852530794154	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	-22	True	NA	NA	False	AAAAAG	-39	NA	166999114	166929515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166998917
transcript_124651.nnic	chr6	-	583	2	ISM	ENSG00000071242.12	ENST00000506565.1	587	8	146	349871	-13	-347814	internal_fragment	FALSE	canonical	3	16	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACATATGTGTCT	-1	True	NA	-8	True	ATTAAA	-17	NA	166862524	166858093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_166858260_166862107
transcript_124652.known	chr6	-	887	10	FSM	ENSG00000026297.17	ENST00000476238.6	887	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	116.595004445853	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAGCTTTCTAAAAA	2192	False	NA	NA	False	AAAAAG	-15	NA	166957184	166929539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166956096_166956192_166957125
transcript_124658.nic	chr6	+	3578	3	ISM	ENSG00000213066.13	ENST00000494781.5	460	6	-127	5160	13	2227	intron_retention	FALSE	canonical	3	439	junction_2	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTGGATAAAATACAACA	11	False	NA	NA	False	AAAAAG	-13	NA	166999329	167006531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_166999515_167000059_167000114_167003192
transcript_12466.known	chr1	-	4809	6	FSM	ENSG00000135823.14	ENST00000542060.5	4809	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	130.348762940045	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGAATTACTAGAATGA	NA	False	NA	-22	True	AATAAA	-29	NA	181023121	180972711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181022638
transcript_124662.known	chr6	+	13956	13	FSM	ENSG00000213066.13	ENST00000366847.9	13956	13	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	76.0333899605225	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGCGATCTTT	17	True	NA	13	True	AATAAA	-19	NA	166999396	167052718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507_167013568_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_124668.known	chr6	+	1484	12	FSM	ENSG00000213066.13	ENST00000349556.4	1484	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	71.5203259555868	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGTGTGGCTGC	28	True	NA	26	True	AATAAA	-18	NA	166999407	167040317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_124681.nic	chr6	+	1382	7	ISM	ENSG00000213066.13	ENST00000366847.9	13956	13	-95	38459	-15	2568	5prime_fragment	FALSE	canonical	3	223	junction_6	77.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTTTGTGTTCTGTCA	108	False	NA	NA	False	ATTAAA	-22	NA	166999301	167014259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507
transcript_124689.known	chr6	+	3451	11	FSM	ENSG00000213066.13	ENST00000622353.4	3451	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	160.580073483605	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTTGTGCTTTTATACT	-2	True	NA	23	True	AATAAA	-25	NA	166999316	167042418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167040047
transcript_1247.known	chr1	+	546	4	FSM	ENSG00000171735.19	ENST00000467404.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2626.57850951893	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAATCTGTGTTTTCAT	11	False	NA	15	True	ATTAAA	-23	NA	6785517	6872019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6806982_6807089_6825091_6825211_6871756
transcript_124707.known	chr6	+	582	4	FSM	ENSG00000280707.3	ENST00000628362.2	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	255.565168901311	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	6	True	NA	21	True	AATAAA	-16	NA	167228299	167237511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_167228398_167231826_167231958_167232478_167232561_167237240
transcript_12471.nnic	chr1	+	615	4	NNC	ENSG00000237292.1	novel	542	3	NA	NA	4825	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTCGGTCTCTCCCTC	NA	False	NA	NA	False	AATAAA	-21	NA	181180161	181182208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_181180247_181181026_181181165_181181726_181181799_181181888
transcript_124723.known	chr6	+	403	3	FSM	ENSG00000280707.3	ENST00000626424.2	573	3	164	6	64	0	multi-exon	FALSE	canonical	3	195	junction_2	346.5	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	25	False	NA	21	True	AATAAA	-16	NA	167228363	167237511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_167228398_167231859_167231958_167237240
transcript_124726.nnic	chr6	+	384	2	Fusion	ENSG00000280707.3_ENSG00000228648.1	novel	573	3	NA	NA	-56	0	multi-exon	FALSE	canonical	3	10	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGTCTCTGGTTTTT	NA	False	NA	11	True	AATGAA	-15	NA	167228143	167245916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_167228398_167245786
transcript_124738.nnic	chr6	-	536	4	FSM	ENSG00000198221.11	ENST00000425438.2	533	4	-8	5	-2	0	multi-exon	FALSE	canonical	2	7	junction_1	14.8548533034381	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCTTCTATTCTCATT	-7	True	NA	-17	True	AATAAA	-13	NA	167826796	167824109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_167824229_167824582_167824807_167825402_167825503_167826703
transcript_124739.nnic	chr6	-	644	4	NNC	ENSG00000198221.11	novel	577	4	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	16.391054470859	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCTTCTATTCTCATT	NA	False	NA	-17	True	AATAAA	-13	NA	167826807	167824109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_167824229_167824582_167824807_167825402_167825551_167826654
transcript_12474.nnic	chr1	+	542	3	Antisense	novelGene_ENSG00000225359.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAGCAGGGG	NA	False	NA	NA	False	NA	NA	NA	181190103	181197916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_181190224_181190503_181190559_181197549
transcript_124740.nnic	chr6	-	601	4	FSM	ENSG00000198221.11	ENST00000686435.1	577	4	-26	2	2	0	multi-exon	FALSE	canonical	2	4	junction_3	15.8394724940223	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCTTCTATTCTCATT	NA	False	NA	-17	True	AATAAA	-13	NA	167826813	167824109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_167824229_167824582_167824807_167825402_167825551_167826703
transcript_124745.nnic	chr6	-	665	3	NNC	ENSG00000198221.11	novel	620	3	NA	NA	-1	-2	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	15	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAGTGGTATATCAAT	-3	True	NA	-3	True	ATTAAA	-18	NA	167826792	167824379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_167824807_167825402_167825503_167826654
transcript_124746.nnic	chr6	-	620	3	FSM	ENSG00000198221.11	ENST00000692751.1	620	3	-2	2	-2	-2	multi-exon	FALSE	canonical	2	8	junction_2	15.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAGTGGTATATCAAT	-7	True	NA	-3	True	ATTAAA	-18	NA	167826796	167824379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_167824807_167825402_167825503_167826703
transcript_124747.nnic	chr6	-	728	3	NNC	ENSG00000198221.11	novel	967	3	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	18.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAGTGGTATATCAAT	NA	False	NA	-3	True	ATTAAA	-18	NA	167826807	167824379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_167824807_167825402_167825551_167826654
transcript_124748.nnic	chr6	-	685	3	FSM	ENSG00000198221.11	ENST00000688535.1	967	3	7	275	2	-2	multi-exon	FALSE	canonical	2	4	junction_2	17.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAGTGGTATATCAAT	NA	False	NA	-3	True	ATTAAA	-18	NA	167826813	167824379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_167824807_167825402_167825551_167826703
transcript_124749.known	chr6	-	1639	3	FSM	ENSG00000198221.11	ENST00000663809.2	1660	3	21	0	3	0	multi-exon	FALSE	canonical	3	5	junction_2	17	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAATATGAGGACAGA	NA	False	NA	NA	False	AAAAAG	-16	NA	167826812	167823341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_167824807_167825402_167825551_167826786
transcript_124752.known	chr6	-	311	2	ISM	ENSG00000198221.11	ENST00000686435.1	577	4	2013	2	686	0	3prime_fragment	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCTTCTATTCTCATT	2015	False	NA	-17	True	AATAAA	-13	NA	167824774	167824109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_167824229_167824582
transcript_124753.nic	chr6	+	520	4	ISM	ENSG00000130396.21	ENST00000400824.8	875	5	113	3199	-20	-3199	5prime_fragment	FALSE	canonical	3	127	junction_3	49.5580467734555	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAAAAAGAAGAGAG	175	False	NA	NA	False	AAGAAA	-6	NA	167827112	167872296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_167827238_167864550_167864747_167870382_167870499_167872213
transcript_124754.nic	chr6	+	759	4	ISM	ENSG00000130396.21	ENST00000344191.8	5249	31	-90	90365	-40	-3199	5prime_fragment	FALSE	canonical	3	102	junction_2	57.7138535265918	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAAAAAGAAGAGAG	254	False	NA	NA	False	AAGAAA	-6	NA	167826870	167872296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_167827238_167864550_167864747_167870385_167870499_167872213
transcript_124755.nnic	chr6	+	523	4	NNC	ENSG00000130396.21	novel	5962	33	NA	NA	-29	-3199	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	60.8604962188118	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAAAAAGAAGAGAG	668	False	NA	NA	False	AAGAAA	-6	NA	167827605	167872296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_167827734_167864550_167864747_167870382_167870499_167872213
transcript_124757.nic	chr6	+	718	4	ISM	ENSG00000130396.21	ENST00000366806.6	5962	33	-25	97936	-25	-3199	5prime_fragment	FALSE	canonical	3	12	junction_1	55.6796392070048	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAAAAAGAAGAGAG	672	False	NA	NA	False	AAGAAA	-6	NA	167827609	167872296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_167827933_167864550_167864747_167870382_167870499_167872213
transcript_124758.nic	chr6	+	715	4	NIC	ENSG00000130396.21	novel	5962	33	NA	NA	-25	-3199	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	49.3851079667635	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAAAAAGAAGAGAG	672	False	NA	NA	False	AAGAAA	-6	NA	167827609	167872296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_167827933_167864550_167864747_167870385_167870499_167872213
transcript_124759.known	chr6	+	1257	2	FSM	ENSG00000130396.21	ENST00000511503.1	1257	2	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGACCGAGGAGCACAAAGA	NA	False	NA	NA	False	NA	NA	NA	167968448	167970288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_167969199_167969781
transcript_12476.known	chr1	-	4065	7	FSM	ENSG00000135821.19	ENST00000417584.6	4065	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	792.270033230814	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTGGATTTTGTTCA	-20	True	NA	0	True	ACTAAA	-20	NA	182391404	182381704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391174
transcript_124761.known	chr6	-	2559	2	FSM	ENSG00000224417.2	ENST00000445442.2	2559	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTTCACTCAATAT	NA	False	NA	2	True	AATAAA	-18	NA	168302114	168298068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_168300590_168302076
transcript_124762.known	chr6	+	1875	5	NNC	ENSG00000112562.20	novel	400	4	NA	NA	-86	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	30.2520660451481	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTAGTCTTTTTTTTTTC	NA	False	NA	7	True	AATAAA	-17	NA	168652958	168667991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_168653229_168664073_168664112_168666420_168667433_168667433_168667440_168667442
transcript_12477.known	chr1	-	7554	7	FSM	ENSG00000135821.19	ENST00000331872.11	7554	7	0	0	0	0	multi-exon	FALSE	canonical	3	1972	junction_2	216.48922221056	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTCTGTGACTCTGTT	0	True	NA	NA	False	AATAAA	-14	NA	182391790	182378097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391678
transcript_124774.nic	chr6	-	780	5	ISM	ENSG00000130024.15	ENST00000366780.8	1589	12	11404	0	6771	0	3prime_fragment	FALSE	canonical	3	126	junction_1	26.1569780364629	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAGCTTAAAATCTGCA	NA	False	NA	-13	True	AATAAA	-17	NA	169712527	169703904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_169704089_169705132_169705322_169705615_169705725_169710235_169710392_169712385
transcript_124776.known	chr6	-	403	3	FSM	ENSG00000232640.1	ENST00000413088.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGGCTCCCACGTTCTCG	NA	False	NA	NA	False	AATAAA	-14	NA	169725854	169725090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_169725317_169725420_169725570_169725826
transcript_124777.known	chr6	+	2667	1	FSM	ENSG00000185127.6	ENST00000332290.3	2667	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTAGTATTTCAGTAG	-6	True	NA	14	True	AATAAA	-8	NA	169702189	169704856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169702200_169704900
transcript_124778.known	chr6	-	2078	1	FSM	ENSG00000184786.6	ENST00000628156.1	2078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGAGTTCCTGTTGTTG	-25	True	NA	-5	True	AATAAA	-19	NA	169751587	169749509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_169749500_169751600
transcript_124780.known	chr6	+	2160	18	FSM	ENSG00000130023.16	ENST00000366773.8	2160	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	12.7832611138896	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCAGGGTCCAGGT	-18	True	NA	97	True	ATTAAA	-30	NA	169751621	169781600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169751664_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_124782.known	chr6	+	1841	17	FSM	ENSG00000130023.16	ENST00000418781.7	1841	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	20.431191686977	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTAAGTCAGGATGCTTT	-2	True	NA	13	True	AGTAAA	-16	NA	169751637	169781516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169751664_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169779181_169779296_169781329
transcript_124786.known	chr6	+	1908	17	FSM	ENSG00000130023.16	ENST00000392095.8	1908	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.7394551519561	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAGGATGCTTTTAAT	-15	True	NA	17	True	AGTAAA	-20	NA	169751624	169781520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169751664_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_124793.known	chr6	+	556	6	FSM	ENSG00000130023.16	ENST00000590711.5	556	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	29.6472595698152	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAGTAAGTTGCAAGTGA	-18	True	NA	NA	False	AAGAAA	-6	NA	169751621	169759060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169751664_169753943_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967
transcript_124794.known	chr6	+	2582	3	FSM	ENSG00000231690.4	ENST00000420557.3	2582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	AAAAAG	-1	NA	169790056	169802873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169790417_169795183_169795363_169800830
transcript_124795.nnic	chr6	+	684	2	NNC	ENSG00000231690.4	novel	1340	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTATGAGTAAGCTCATT	NA	False	NA	2	True	TATAAA	-13	NA	169790049	169791273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_169790417_169790956
transcript_124796.known	chr6	+	5155	11	FSM	ENSG00000112584.14	ENST00000476287.4	5155	11	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_5	21.4720748880959	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTCACATTTCTCTG	-3	True	NA	NA	False	AATAAA	-29	NA	170306757	170407067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_170306843_170317369_170319125_170323078_170323260_170330448_170330551_170348150_170348324_170358225_170358319_170388286_170388494_170391012_170391122_170395486_170395580_170404549_170404602_170404762
transcript_124820.known	chr6	-	891	6	FSM	ENSG00000008018.9	ENST00000262193.7	891	6	0	0	0	0	multi-exon	TRUE	canonical	3	4339	junction_4	473.042492805879	41619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCTATAACTTGT	-27	True	NA	-15	True	ATTAAA	-17	NA	170553307	170535119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170535406_170537233_170537341_170543600_170543731_170546102_170546185_170549005_170549114_170553129
transcript_124823.known	chr6	+	1861	8	FSM	ENSG00000112592.15	ENST00000230354.10	1861	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	76.3234256707759	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTAAGAGTCATGTG	13	True	NA	31	True	AATAAA	-32	NA	170554378	170572870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_170554464_170556878_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
transcript_124832.known	chr6	+	935	5	FSM	ENSG00000112592.15	ENST00000421512.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	38.9551023615649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGCACTGATTTTCAGT	29	False	NA	NA	False	NA	NA	NA	170554301	170566957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544_170564633_170566917
transcript_124835.nic	chr6	+	1527	4	ISM	ENSG00000112592.15	ENST00000421512.5	935	5	-31	1724	-31	-1724	5prime_fragment	FALSE	canonical	3	245	junction_1	39.6007856263259	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTGTTTTGTATCTT	-2	True	NA	NA	False	AATAAA	-20	NA	170554270	170565233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544
transcript_124837.known	chr6	+	1701	7	FSM	ENSG00000112592.15	ENST00000540980.5	1701	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	104.468496048649	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTGTAAGAGTCATGT	60	False	NA	30	True	AATAAA	-31	NA	170554332	170572869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_170554464_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
transcript_124839.known	chr6	-	3355	6	FSM	ENSG00000071994.11	ENST00000541970.6	3355	6	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	90.0653096369518	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTGGTGATAGTGTTT	-19	True	NA	NA	False	AAAAAG	-20	NA	170584637	170575294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
transcript_124840.known	chr6	-	900	6	FSM	ENSG00000071994.11	ENST00000545869.5	900	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	172.696728399817	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGAAGCAGGATGTA	13	True	NA	-82	True	NA	NA	NA	170584605	170577593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583624_170584298
transcript_124843.known	chr6	-	1082	6	FSM	ENSG00000071994.11	ENST00000542896.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	164.566582269913	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGGAGTCTTTACTGTT	6	True	NA	-2	True	ATTAAA	-21	NA	170584612	170578481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170578657_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298
transcript_124846.known	chr6	-	1287	4	FSM	ENSG00000071994.11	ENST00000614056.4	1287	4	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	173.245490561804	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGTTGCTTTTATTTTG	92	False	NA	-15	True	AATAAA	-13	NA	170584692	170581747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298
transcript_124847.known	chr6	-	936	7	FSM	ENSG00000071994.11	ENST00000392090.6	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	163.818412341904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCTTAAAGCCTTGAA	203	False	NA	-47	True	NA	NA	NA	170584581	170577558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298_170584393_170584491
transcript_12485.known	chr1	-	4238	7	FSM	ENSG00000135828.11	ENST00000367559.7	4238	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3.40342964277702	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGATTTTCTTTAA	-3	True	NA	1	True	AATAAA	-17	NA	182589256	182573633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_182575579_182576255_182576390_182581224_182581358_182582052_182582259_182584080_182584167_182585326_182586971_182589166
transcript_124850.nnic	chr7	-	2008	4	NNC	ENSG00000232325.4	novel	877	3	NA	NA	-805	161	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.90668171555645	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTGAGTTGCTATCGA	NA	False	NA	NA	False	CATAAA	-25	NA	96488	70810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_71572_71676_71834_75531_75697_95563
transcript_124851.nnic	chr7	-	2249	3	NNC	ENSG00000232325.4	novel	877	3	NA	NA	-805	559	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	4	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGCCAGTTGTATTAG	NA	False	NA	NA	False	AATAAA	-19	NA	96488	70412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_71572_75531_75697_95563
transcript_124852.nnic	chr7	-	1851	3	NNC	ENSG00000232325.4	novel	877	3	NA	NA	-805	161	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	4	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCTGAGTTGCTATCGA	NA	False	NA	NA	False	CATAAA	-25	NA	96488	70810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_71572_75531_75697_95563
transcript_124856.nnic	chr7	-	1818	3	NNC	ENSG00000232325.4	novel	877	3	NA	NA	-805	-3660	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	4	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTGTCCTGTGATGTTT	NA	False	NA	1	True	AATACA	-20	NA	96488	74631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_75360_75531_75697_95563
transcript_124858.known	chr7	+	1365	2	FSM	ENSG00000242611.2	ENST00000478759.2	1365	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACCCGTTCATTTCCTAC	NA	False	NA	NA	False	AATAAA	-15	NA	77037	81178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77354_80129
transcript_12486.known	chr1	-	2408	5	FSM	ENSG00000143333.7	ENST00000367558.6	2408	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	24.1699710384601	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTTCAAGTGCTG	0	True	NA	-12	True	AATAAA	-19	NA	182604389	182598622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_182600514_182601965_182602133_182602419_182602485_182603228_182603340_182604215
transcript_124860.nic	chr7	-	793	4	NIC	ENSG00000242474.3	novel	811	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	28.003967972811	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGTCATTTCAGGT	NA	False	NA	-16	True	AATAAA	-13	NA	149544	144443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144812_145293_145416_148531_148619_149328
transcript_124862.known	chr7	-	605	3	FSM	ENSG00000242474.3	ENST00000658260.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCCTACAGCCCAGAGG	NA	False	NA	NA	False	AATAAA	-29	NA	149436	135861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_136272_148531_148619_149328
transcript_124863.known	chr7	-	1201	3	FSM	ENSG00000242474.3	ENST00000659412.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	27.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTTCAGGTATTA	NA	False	NA	-12	True	AATAAA	-17	NA	149466	144439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_145416_148531_148619_149328
transcript_124865.known	chr7	-	2091	3	FSM	ENSG00000242474.3	ENST00000665089.1	2091	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	149428	145935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_147840_148531_148619_149328
transcript_124868.nnic	chr7	-	2259	3	NNC	ENSG00000242474.3	novel	2091	3	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	27.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	NA	False	NA	0	True	ATTAAA	-16	NA	149544	145935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_147892_148531_148619_149328
transcript_124869.known	chr7	-	746	2	FSM	ENSG00000242474.3	ENST00000497320.2	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTTCATTCAGTTGT	NA	False	NA	NA	False	TTTAAA	-9	NA	149466	148010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_148619_149328
transcript_124872.known	chr7	+	885	2	FSM	ENSG00000240859.3	ENST00000471299.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTAAGGGGACTGTTTG	34	False	NA	NA	False	NA	NA	NA	149777	153938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150133_153408
transcript_124873.known	chr7	+	3176	10	FSM	ENSG00000177706.9	ENST00000313766.6	3176	10	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_6	10.5946643920535	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTGGTGTGTGGCTGCC	0	True	NA	53	True	AATAAA	-43	NA	192570	260772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_193805_195553_195733_208897_208977_246414_246508_248314_248431_255848_256030_256653_256764_257004_257087_258645_258706_259730
transcript_124875.known	chr7	-	2305	6	FSM	ENSG00000197461.13	ENST00000402802.7	2305	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.46969384566991	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGACGTGAGAAGCGT	1279	False	NA	-14	True	ATTAAA	-23	NA	519409	497257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_498575_501115_501243_510808_510997_512350_512456_517393_517491_518938
transcript_12488.known	chr1	+	1376	1	FSM	ENSG00000261504.1	ENST00000566297.1	1376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTGCCTGTTTATAT	62	False	NA	14	True	AATAAA	-17	NA	182615253	182616629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_182615300_182616600
transcript_124884.known	chr7	+	743	3	FSM	ENSG00000223855.3	ENST00000663680.2	754	3	0	11	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCCATTTCTCGCA	33	False	NA	NA	False	AATAAA	-19	NA	522541	525233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_522704_524079_524281_524853
transcript_124886.known	chr7	-	2007	11	FSM	ENSG00000188191.15	ENST00000360274.8	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	126.476124229042	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCCGCAGGTAGACCCCA	639	False	NA	NA	False	GGGGCT	-22	NA	712572	549749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712413
transcript_124887.known	chr7	-	2553	11	FSM	ENSG00000188191.15	ENST00000406797.5	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	145.287473651378	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	4	False	NA	-42	True	ATTAAA	-15	NA	713207	549197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_713054
transcript_124888.known	chr7	-	2472	11	FSM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	128.116392393792	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	3	True	NA	-42	True	ATTAAA	-15	NA	727281	549197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
transcript_124890.known	chr7	-	1917	11	FSM	ENSG00000188191.15	ENST00000403562.5	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_10	71.0113371230256	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGACCCCAGTAGGGGG	-9	True	NA	NA	False	GGGGCT	-30	NA	727650	549741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_124902.nnic	chr7	-	1402	10	NNC	ENSG00000188191.15	novel	1006	9	NA	NA	-52	819	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	146.448322322624	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTGGCAGCTTCTCTAT	NA	False	NA	-18	True	ATTAAA	-17	NA	727702	578436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_578813_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_124910.nnic	chr7	-	1152	10	NNC	ENSG00000188191.15	novel	1006	9	NA	NA	-52	569	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	146.448322322624	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTAAAATAAAAAACCT	NA	False	NA	NA	False	NA	NA	NA	727702	578686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_578813_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_124916.nic	chr7	-	1598	9	ISM	ENSG00000188191.15	ENST00000403562.5	1917	11	-52	28942	-52	572	5prime_fragment	FALSE	canonical	3	304	junction_8	65.4387834162586	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAAATAAAAAACCTGCA	NA	False	NA	NA	False	NA	NA	NA	727702	578683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_124917.nic	chr7	-	1381	6	ISM	ENSG00000188191.15	ENST00000403562.5	1917	11	-52	55754	-52	1900	5prime_fragment	FALSE	canonical	3	304	junction_5	75.544424016601	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCCTGGCCCCGCAGCC	NA	False	NA	NA	False	AATAAA	-23	NA	727702	605495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_124927.nnic	chr7	-	607	3	NNC	ENSG00000188191.15	novel	602	2	NA	NA	-45	1	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	3.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCATACTTGGTGCTT	NA	False	NA	-2	True	AATAAA	-18	NA	727695	716617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_716842_722748_723026_727589
transcript_124932.nnic	chr7	-	330	2	NIC	ENSG00000188191.15	novel	602	2	NA	NA	-29	1	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCATACTTGGTGCTT	-26	True	NA	-2	True	AATAAA	-18	NA	727310	716617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_716847_727209
transcript_124933.nnic	chr7	-	338	2	NIC	ENSG00000188191.15	novel	602	2	NA	NA	-48	1	combination_of_known_splicesites	FALSE	canonical	3	48	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCATACTTGGTGCTT	NA	False	NA	-2	True	AATAAA	-18	NA	727698	716617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_716847_727589
transcript_124934.known	chr7	+	3412	13	FSM	ENSG00000164818.16	ENST00000297440.11	3412	13	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	49.54199957836	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGTGTATGCCTGACTT	-4	True	NA	14	True	ATTAAA	-15	NA	726698	786475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_727316_729662_729848_740818_740944_741346_741466_754588_754822_756781_756995_761752_761897_763805_763975_770470_770619_774047_774199_775005_775163_779952_780145_785516
transcript_124936.nic	chr7	+	4041	20	NIC	ENSG00000164828.18	novel	4062	20	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	109.281993103258	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	NA	False	NA	12	True	AATAAA	-22	NA	816581	874902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_124937.nic	chr7	+	3942	19	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	149	junction_6	94.9152968717209	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	NA	False	NA	12	True	AATAAA	-22	NA	816581	874902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_124940.known	chr7	+	3812	18	FSM	ENSG00000164828.18	ENST00000389574.7	3812	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	109.800069960459	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	-16	True	NA	12	True	AATAAA	-22	NA	816614	874902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_124944.known	chr7	+	2090	9	FSM	ENSG00000239857.7	ENST00000265857.8	2090	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_3	29.1161467230813	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	-3	True	NA	16	True	AATAAA	-16	NA	876553	896436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_876801_886055_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
transcript_124947.nic	chr7	+	1068	6	NIC	ENSG00000164828.18	novel	1309	7	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	297	junction_1	71.3234884172108	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTTATTTTTATAAAAC	NA	False	NA	NA	False	AATAAA	-23	NA	816581	843818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340
transcript_124948.known	chr7	+	570	5	FSM	ENSG00000164828.18	ENST00000450538.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_4	161.097020456618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATAAGCTTTCACCTT	-16	True	NA	NA	False	NA	NA	NA	816614	843006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_842966
transcript_124949.nic	chr7	+	938	5	ISM	ENSG00000164828.18	ENST00000389574.7	3812	18	0	31084	0	0	5prime_fragment	FALSE	canonical	3	160	junction_1	130.746653876877	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTTATTTTTATAAAAC	-16	True	NA	NA	False	AATAAA	-23	NA	816614	843818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340
transcript_124950.nic	chr7	+	572	3	ISM	ENSG00000164828.18	ENST00000450538.5	570	5	-33	3826	-33	0	5prime_fragment	FALSE	canonical	3	297	junction_1	26.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	NA	False	NA	12	True	AATAAA	-21	NA	816581	839180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_816674_832504_832602_838797
transcript_124951.nic	chr7	+	322	2	ISM	ENSG00000164828.18	ENST00000450538.5	570	5	-33	10272	-33	-6252	5prime_fragment	FALSE	canonical	3	297	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTTATGGCTTTAGA	NA	False	NA	NA	False	AATAAA	-1	NA	816581	832734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_816674_832504
transcript_124952.nic	chr7	+	442	2	ISM	ENSG00000164828.18	ENST00000427969.5	520	4	0	3388	0	0	5prime_fragment	FALSE	canonical	3	160	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	-16	True	NA	12	True	AATAAA	-21	NA	816614	839180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_816674_838797
transcript_124953.known	chr7	+	478	2	FSM	ENSG00000164828.18	ENST00000483996.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	17	True	NA	12	True	AATAAA	-21	NA	832506	839180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_832602_838797
transcript_124954.known	chr7	+	3868	18	FSM	ENSG00000164828.18	ENST00000425407.6	3868	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	94.6547176369686	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	15	True	NA	30	True	AATAAA	-40	NA	832504	874920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_124955.known	chr7	+	4010	19	FSM	ENSG00000164828.18	ENST00000401592.6	4010	19	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	110.366505028015	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTGTTTCTGCCCCT	-14	True	NA	44	True	TATAAA	-20	NA	832475	874934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_124956.known	chr7	-	2118	11	FSM	ENSG00000105963.15	ENST00000611167.4	2118	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	8.78862901708793	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGTCCGAGGATGG	-3	True	NA	-3	True	AATAAA	-22	NA	945816	897900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_945761
transcript_124957.known	chr7	-	4839	3	FSM	ENSG00000240230.6	ENST00000344111.4	4839	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	14	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGAGCGTTTTCCAAG	-11	True	NA	-5	True	ATTAAA	-17	NA	975549	964851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_969457_973180_973293_975427
transcript_12496.known	chr1	+	2543	13	FSM	ENSG00000135838.14	ENST00000367553.6	2543	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	14.455871548344	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	-2	True	NA	NA	False	AATAAA	-19	NA	182789772	182830384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_124965.known	chr7	-	621	5	FSM	ENSG00000146540.15	ENST00000491163.1	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	461.130404549516	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAGTGGGTTCAGCGC	9	True	NA	NA	False	NA	NA	NA	1138260	997632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138217
transcript_124966.known	chr7	-	1147	4	FSM	ENSG00000146540.15	ENST00000412051.5	1147	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	455.621431551336	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	18	True	NA	-46	True	AATAAA	-7	NA	1028339	997015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1028257
transcript_124973.known	chr7	-	1294	5	FSM	ENSG00000146540.15	ENST00000357429.10	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	271.541318218793	2971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGCGTCCCCTGCCTGTG	12	True	NA	-16	True	AATAAA	-37	NA	1138257	996985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
transcript_124978.nic	chr7	-	854	5	NIC	ENSG00000178381.12	novel	853	5	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	67.4550776443108	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTTCTCATTGCCC	504	False	NA	-3	True	AATAAA	-20	NA	1160264	1152905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_1153132_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_124979.known	chr7	-	878	5	FSM	ENSG00000178381.12	ENST00000316495.8	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	10.3077640640442	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTGTTCTCATTGCC	-22	True	NA	-4	True	AATAAA	-19	NA	1160196	1152906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1153225_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_124984.known	chr7	-	544	2	FSM	ENSG00000178381.12	ENST00000471448.2	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTTCTCATTGCCC	5091	False	NA	-3	True	AATAAA	-20	NA	1155677	1152905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1153225_1155452
transcript_124985.known	chr7	+	588	4	FSM	ENSG00000230487.9	ENST00000651857.1	588	4	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_3	3.68178700572909	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCAGTAGTTGTAGCC	-1	True	NA	NA	False	AATAAA	-20	NA	1570141	1579485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286
transcript_124986.known	chr7	+	471	3	FSM	ENSG00000230487.9	ENST00000524978.2	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGATTGCTGTGTTT	91	False	NA	NA	False	NA	NA	NA	1570233	1576062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_1570280_1574714_1574864_1575786
transcript_124987.known	chr7	-	774	3	FSM	ENSG00000157778.9	ENST00000404674.7	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	111	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-41	True	NA	-22	True	ATTAAA	-2	NA	1570045	1567350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1567851_1569123_1569361_1570008
transcript_124988.known	chr7	-	1007	3	FSM	ENSG00000157778.9	ENST00000252329.3	1007	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	149.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGAGGGAGGAACTTTG	NA	False	NA	NA	False	NA	NA	NA	1571005	1567612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1567851_1569123_1569361_1570473
transcript_124991.known	chr7	-	2695	19	FSM	ENSG00000002822.16	ENST00000265854.12	2695	19	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_18	27.0724337041698	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-3	True	NA	-11	True	AATAAA	-16	NA	2232945	1815794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
transcript_124992.known	chr7	-	2762	19	FSM	ENSG00000002822.16	ENST00000399654.6	2762	19	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_18	52.6940856896357	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCACTCGCCCTGTGTA	9218	False	NA	-10	True	AATAAA	-17	NA	2232974	1815793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230765_2232871
transcript_124993.nic	chr7	-	2787	18	NIC	ENSG00000002822.16	novel	2695	19	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_15	49.8632038716529	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	9014	False	NA	-11	True	AATAAA	-16	NA	2233178	1815794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2229983_2230144_2230548_2230728_2232871
transcript_124997.known	chr7	-	5697	24	FSM	ENSG00000286192.1	ENST00000651235.1	5697	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	98.0747178611994	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTAGACACTCCCACTC	-23	True	NA	-20	True	AATAAA	-7	NA	2242215	1815803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149095_2149239_2200261_2200558_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871_2232971_2234197_2235565_2238014_2238938_2239417_2239708_2242161
transcript_1250.known	chr1	+	538	3	FSM	ENSG00000171735.19	ENST00000490738.5	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_1	2254.5	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATGAGTGCATTTCC	-16	True	NA	49	True	AATAAA	-34	NA	6785453	6872053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6825091_6825211_6871756
transcript_12500.known	chr1	+	2144	13	FSM	ENSG00000135838.14	ENST00000488424.5	2144	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	22.6421435969889	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	NA	False	NA	NA	False	AATAAA	-19	NA	182789292	182830384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182829602
transcript_125002.known	chr7	-	2511	4	FSM	ENSG00000122687.19	ENST00000486040.1	2511	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	65.4539702556096	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	3	True	NA	-22	True	CATAAA	-14	NA	2242189	2234294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2235565_2238014_2238938_2239417_2239708_2242161
transcript_125005.nnic	chr7	-	1809	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-136	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	150.5	264	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	NA	False	NA	-5	True	AATAAA	-29	NA	2242341	2234194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_125006.known	chr7	-	1819	3	FSM	ENSG00000122687.19	ENST00000467199.5	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	165.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	23	True	NA	-41	True	NA	NA	NA	2242169	2234230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2235565_2239417_2239708_2241974
transcript_125007.known	chr7	-	1704	3	FSM	ENSG00000122687.19	ENST00000242257.14	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	92.5	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-13	True	NA	-5	True	AATAAA	-29	NA	2242205	2234194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2235565_2239417_2239708_2242161
transcript_125012.nnic	chr7	-	1529	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-33	2	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	67	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGATGTGGTGTGTTTA	NA	False	NA	-18	True	CATAAA	-18	NA	2242238	2234290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_2235565_2239529_2239708_2242161
transcript_125014.nnic	chr7	-	1599	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	150.5	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGATGTGGTGTGTT	NA	False	NA	-20	True	CATAAA	-16	NA	2242229	2234292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_125017.known	chr7	-	582	2	FSM	ENSG00000122687.19	ENST00000407040.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGGGAGATTTGAGCTGA	2948	False	NA	NA	False	NA	NA	NA	2239244	2235046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2235565_2239180
transcript_125027.known	chr7	+	712	5	FSM	ENSG00000106268.16	ENST00000397046.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	410.582817468047	5989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2	True	NA	19	True	AATAAA	-15	NA	2242258	2251145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242293_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_125029.known	chr7	+	783	5	FSM	ENSG00000106268.16	ENST00000397048.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	445.532827073382	5100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	4	True	NA	19	True	AATAAA	-15	NA	2242260	2251145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242293_2242924_2243049_2244562_2244727_2249856_2250003_2250828
transcript_125036.known	chr7	+	658	4	FSM	ENSG00000106268.16	ENST00000356714.6	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	297.694474251707	7833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	4	True	NA	19	True	AATAAA	-15	NA	2242225	2251145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242257_2244562_2244727_2249856_2250003_2250828
transcript_125044.known	chr7	+	771	4	FSM	ENSG00000106268.16	ENST00000343985.8	771	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	416.48769489626	5119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	648	False	NA	19	True	AATAAA	-15	NA	2242904	2251145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2243049_2244562_2244727_2249856_2250003_2250828
transcript_125045.known	chr7	+	698	4	FSM	ENSG00000106268.16	ENST00000339737.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	342.0061727838	5829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	648	False	NA	19	True	AATAAA	-15	NA	2242904	2251145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242976_2244562_2244727_2249856_2250003_2250828
transcript_125046.known	chr7	+	822	2	FSM	ENSG00000106268.16	ENST00000454650.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGCAAGAAGGAGAGAC	20	False	NA	NA	False	AAAAAG	-40	NA	2242276	2244685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242976_2244562
transcript_125047.known	chr7	+	714	3	FSM	ENSG00000106268.16	ENST00000397049.2	714	3	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	1.5	4909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	1562	False	NA	19	True	AATAAA	-15	NA	2244475	2251145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2244727_2249856_2250003_2250828
transcript_125049.known	chr7	-	4704	11	FSM	ENSG00000106266.11	ENST00000222990.8	4704	11	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	19.3051806518354	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGTGTATGAAAGTTG	-33	True	NA	NA	False	AATAAA	-20	NA	2314441	2251769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
transcript_125056.nic	chr7	-	468	2	ISM	ENSG00000106266.11	ENST00000447136.1	583	4	-214	62009	-214	-59011	5prime_fragment	FALSE	canonical	3	10	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGTGGTGTGACCCTT	1060	False	NA	-3	True	ATTAAA	-16	NA	2354532	2337124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_2337282_2354221
transcript_125057.known	chr7	+	15979	2	FSM	ENSG00000136213.10	ENST00000258711.7	15979	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGGGACTGAACAAAACC	-9	True	NA	NA	False	AGTAAA	-17	NA	2403587	2448483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2403646_2432562
transcript_125059.nnic	chr7	+	1566	2	NNC	ENSG00000136213.10	novel	15979	2	NA	NA	5	686	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGGAATGCTGGAG	-4	True	NA	51	True	AATATA	-22	NA	2403592	2434061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_2403660_2432562
transcript_125061.nic	chr7	+	2036	6	ISM	ENSG00000106003.14	ENST00000222725.10	2445	8	5285	0	1466	0	3prime_fragment	FALSE	canonical	3	33	junction_1	6.5299310869258	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGGGGTCCTGGTCTTG	4889	False	NA	34	True	AATAAA	-18	NA	2525058	2528429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_2525319_2525413_2525568_2525684_2525771_2526243_2526410_2526835_2526922_2527145
transcript_125063.known	chr7	-	2779	14	FSM	ENSG00000106009.16	ENST00000340611.9	2779	14	0	0	0	0	multi-exon	TRUE	canonical	3	528	junction_13	96.0347570216795	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTCATTCATTCGC	-11	True	NA	0	True	NA	NA	NA	2555524	2537809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_125070.nic	chr7	-	890	2	ISM	ENSG00000106009.16	ENST00000469750.5	5226	11	-50	15935	-50	-11635	5prime_fragment	FALSE	canonical	3	528	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATTAGCTGTGCCTG	NA	False	NA	NA	False	NA	NA	NA	2555744	2553815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_2554448_2555486
transcript_125071.known	chr7	-	5226	11	FSM	ENSG00000106009.16	ENST00000469750.5	5226	11	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_10	81.5943625503625	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATGGCATTGAAGT	20	False	NA	-33	True	ATTAAA	-21	NA	2555694	2537880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2541053_2541297_2541485_2541717_2541837_2542119_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_125072.known	chr7	+	6857	22	FSM	ENSG00000106012.18	ENST00000402050.7	6857	22	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	9.72967967955095	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGTGCCCCGTGAAGA	1	True	NA	17	True	AATAAA	-19	NA	2558978	2614728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2559218_2567115_2567164_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_125074.known	chr7	+	2170	21	FSM	ENSG00000106012.18	ENST00000438376.6	2170	21	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	9.00263850212814	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCGTCACTGTCTCCAC	12	True	NA	NA	False	NA	NA	NA	2559051	2610162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2559218_2568953_2569000_2571525_2571655_2572191_2572327_2573417_2573489_2578241_2578356_2578475_2578527_2582579_2582651_2583636_2583710_2584235_2584286_2586207_2586372_2587821_2587878_2589906_2590107_2593021_2593127_2594885_2594977_2598464_2598633_2601440_2601465_2604880_2604992_2605875_2605998_2607123_2607228_2610043
transcript_125076.nnic	chr7	-	894	3	FSM	ENSG00000289352.1	ENST00000690042.1	905	3	6	5	6	-5	multi-exon	FALSE	canonical	1	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGCGGGTCCACTCCTT	NA	False	NA	-4	True	TATAAA	-32	NA	2622230	2614587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2614977_2617649_2617802_2621877
transcript_125079.known	chr7	+	323	1	FSM	ENSG00000286874.1	ENST00000667321.1	323	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGTTTCAGAGTTTTT	389	False	NA	NA	False	AATAAA	-38	NA	4642247	4642570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4642200_4642600
transcript_125080.known	chr7	+	5529	17	FSM	ENSG00000242802.9	ENST00000649063.2	5529	17	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_9	15.4958411759414	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTCCACACTGCCT	-29	True	NA	16	True	AATAAA	-17	NA	4775622	4794397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_12509.known	chr1	+	4493	28	FSM	ENSG00000135829.17	ENST00000367549.4	4493	28	0	0	0	0	multi-exon	TRUE	canonical	3	791	junction_11	102.208466599978	6552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTCCCATAT	-5	True	NA	8	True	AATAAA	-21	NA	182839346	182887982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
transcript_125094.nic	chr7	+	2337	7	NIC	ENSG00000196204.12	novel	2201	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	109.554273713484	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	-47	True	NA	18	True	ATTAAA	-18	NA	4974010	4998167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4995474_4995583_4996609
transcript_125100.known	chr7	+	807	7	FSM	ENSG00000196204.12	ENST00000406089.6	807	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.712698402262	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCGAGGAGCTCAGAGAAAA	NA	False	NA	NA	False	NA	NA	NA	4973987	4995522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4986566_4986632_4989062_4989178_4995474
transcript_125101.known	chr7	+	2201	6	FSM	ENSG00000196204.12	ENST00000404006.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.464003402149	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	-21	True	NA	16	True	ATTAAA	-16	NA	4974036	4998165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4996609
transcript_125107.known	chr7	+	4125	6	FSM	ENSG00000146587.18	ENST00000353796.7	4125	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	26.8596351427193	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAAAAGAATATAAATCT	NA	False	NA	NA	False	AGTAAA	-10	NA	5045820	5067257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5045959_5046254_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694
transcript_125108.nic	chr7	+	671	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	-26	8988	-5	-191	5prime_fragment	FALSE	canonical	0	0	junction_3	113.151171005872	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCAAACTATGTTGGT	-47	True	NA	NA	False	AAGAAA	-40	NA	4974010	4989177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_125109.known	chr7	+	1360	5	FSM	ENSG00000196204.12	ENST00000403969.5	1360	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	131.473143645385	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTTCACAGTGAACAA	-8	True	NA	NA	False	NA	NA	NA	4974049	4997452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4996609
transcript_125126.nnic	chr7	-	1200	3	Antisense	novelGene_ENSG00000164638.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTTTGCCTGTCCTTCT	NA	False	NA	NA	False	AATAAA	-37	NA	5296598	5289857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_5290593_5290712_5290845_5296265
transcript_125128.known	chr7	+	632	1	FSM	ENSG00000272953.1	ENST00000609130.1	632	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAATGGCGTTTGCAT	9	True	NA	6	True	AATAAA	-23	NA	5425769	5426401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5425800_5426400
transcript_125129.known	chr7	+	942	1	FSM	ENSG00000273084.1	ENST00000608012.1	942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTCTGAGCACAGGCTTT	545	False	NA	NA	False	NA	NA	NA	5428730	5429672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5428700_5429700
transcript_125142.known	chr7	-	2554	6	FSM	ENSG00000075624.17	ENST00000674681.1	2554	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	12673.2737743647	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTGGACCTCAGGGCCT	-1	True	NA	NA	False	NA	NA	NA	5530601	5526408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529685_5530541
transcript_125145.known	chr7	-	1687	5	FSM	ENSG00000075624.17	ENST00000473257.3	1687	5	0	0	0	0	multi-exon	FALSE	canonical	1	236	junction_4	13567.2290349762	2439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	786	False	NA	-3	True	AATAAA	-22	NA	5530604	5527146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5530523
transcript_125148.known	chr7	-	425	2	FSM	ENSG00000075624.17	ENST00000646584.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCGAGTAGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	5562716	5561851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5561950_5562389
transcript_125150.known	chr7	-	1812	6	FSM	ENSG00000075624.17	ENST00000646664.1	1812	6	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_5	1415.47594822378	30841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAGTGTGACTTTGTGG	-1	True	NA	-4	True	AATAAA	-21	NA	5530601	5527147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_125151.known	chr7	-	811	3	FSM	ENSG00000075624.17	ENST00000676319.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14091	8104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	786	False	NA	-3	True	AATAAA	-22	NA	5530604	5527146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527784_5529570_5529664_5530523
transcript_125152.known	chr7	-	2245	5	FSM	ENSG00000075624.17	ENST00000462494.5	2245	5	0	0	0	0	multi-exon	FALSE	canonical	3	28182	junction_4	1514.40307959935	2039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-1	True	NA	-12	True	AATAAA	-13	NA	5530601	5527155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5529401_5529534_5529664_5530523
transcript_125153.known	chr7	-	1845	7	FSM	ENSG00000075624.17	ENST00000425660.5	1845	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_4	14377.5667389629	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-1	True	NA	-12	True	AATAAA	-13	NA	5530601	5527155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529018_5529060_5529160_5529401_5529534_5529664_5530523
transcript_125154.known	chr7	+	2784	5	FSM	ENSG00000075618.18	ENST00000382361.8	2784	5	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_2	70.1248885917119	1352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	1	True	NA	32	True	AATAAA	-22	NA	5592815	5606655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271
transcript_125156.known	chr7	-	5639	17	FSM	ENSG00000011275.19	ENST00000425013.6	5639	17	0	0	0	0	multi-exon	FALSE	canonical	2	133	junction_1	42.5286668025227	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	NA	False	NA	-8	True	AATAAA	-19	NA	5781696	5620046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
transcript_125157.known	chr7	-	5777	17	FSM	ENSG00000011275.19	ENST00000389902.8	5777	17	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_14	49.5334088646239	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	22	False	5781685	-8	True	AATAAA	-19	NA	5781663	5620046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_125163.nic	chr7	-	1673	8	ISM	ENSG00000011275.19	ENST00000389902.8	5777	17	-34	105334	-1	4149	5prime_fragment	FALSE	canonical	3	84	junction_5	65.1168494449221	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGAGAAAACAAATG	NA	False	NA	15	True	ATTAAA	-38	NA	5781697	5725380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_125169.nnic	chr7	+	1141	6	FSM	ENSG00000235944.9	ENST00000690822.1	1137	6	-8	4	-7	-4	multi-exon	TRUE	canonical	2	8	junction_3	4.1182520563948	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTTGGGTTCTGTGGA	-3	True	NA	11	True	AGTAAA	-22	NA	5823152	5854434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5823527_5831180_5831284_5833526_5833569_5839948_5840076_5840689_5840857_5854106
transcript_125172.nnic	chr7	+	1014	5	NIC	ENSG00000235944.9	novel	1137	6	NA	NA	-7	-4	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	3.26917420765551	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTTGGGTTCTGTGGA	-3	True	NA	11	True	AGTAAA	-22	NA	5823152	5854434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_5823527_5831180_5831284_5833526_5833569_5840689_5840857_5854106
transcript_125176.nnic	chr7	+	861	3	FSM	ENSG00000235944.9	ENST00000691068.1	857	3	-9	5	0	-4	multi-exon	FALSE	canonical	2	4	junction_1	7.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATTTGGGTTCTGTGGA	5	True	NA	11	True	AGTAAA	-22	NA	5823160	5854434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5823527_5840689_5840857_5854106
transcript_12518.known	chr1	+	814	6	FSM	ENSG00000135829.17	ENST00000483416.1	814	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	328.235281467425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGTACACCCAAGTGG	7	True	NA	35	True	AAGAAA	-14	NA	182839733	182854142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_182839936_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029
transcript_125183.known	chr7	+	2379	15	FSM	ENSG00000122674.12	ENST00000325974.9	2379	15	0	0	0	0	multi-exon	FALSE	canonical	3	1156	junction_8	306.421153756375	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACATGAGAAGGT	-2	True	NA	NA	False	NA	NA	NA	5898732	5926550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5898920_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_125187.nnic	chr7	+	1791	15	NNC	ENSG00000122674.12	novel	2867	4	NA	NA	163	0	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	503.955415909473	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTGGTTTGGTGTTG	185	False	NA	16	True	AATAAA	-16	NA	5898962	5925970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_5899142_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_12519.known	chr1	+	7929	28	FSM	ENSG00000135862.6	ENST00000258341.5	7929	28	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_1	48.7406844534179	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGGCCTGAGTG	-33	True	NA	12	True	AATAAA	-24	NA	183023419	183145592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405_183133551_183134659_183134810_183135041_183135157_183136385_183136586_183137668_183137828_183140403_183140504_183142533
transcript_125192.known	chr7	+	2218	14	FSM	ENSG00000122674.12	ENST00000628813.2	2218	14	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	546.931104560798	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACATGAGAAGGT	22	False	NA	NA	False	NA	NA	NA	5898799	5926550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5898920_5900283_5900382_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_125202.known	chr7	+	2062	3	FSM	ENSG00000122674.12	ENST00000478672.1	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	2018	junction_2	178	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	3	True	NA	NA	False	NA	NA	NA	5898780	5902297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5898920_5900283_5900382_5900472
transcript_125203.known	chr7	-	2765	15	FSM	ENSG00000122512.16	ENST00000642456.1	2765	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_14	24.5083284469852	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTGATCTTGAGAA	12	True	NA	-38	True	AATACA	-12	NA	6009075	5973273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006027_6008996
transcript_125215.known	chr7	-	4411	15	FSM	ENSG00000086232.13	ENST00000199389.11	4411	15	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_8	41.9160969518092	673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGCTGGGCATGGTG	11	False	6059186	NA	False	AATAAA	-25	NA	6059175	6022246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6024802_6026727_6026962_6028614_6028698_6028917_6029033_6037423_6037525_6038559_6038672_6040891_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_125223.known	chr7	+	1107	5	FSM	ENSG00000106305.10	ENST00000400479.6	1107	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	317.915377891665	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAACTGATTTTAAAGGG	-26	True	NA	NA	False	NA	NA	NA	6009254	6023695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6009379_6014901_6015053_6015145_6015353_6017813_6018046_6023302
transcript_125232.known	chr7	+	1198	4	FSM	ENSG00000106305.10	ENST00000223029.8	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_3	30.5068298363935	3005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	-9	True	NA	28	True	AATAAA	-17	NA	6009271	6023834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6009499_6015145_6015353_6017813_6018046_6023302
transcript_125233.nnic	chr7	+	1123	4	NIC	ENSG00000106305.10	novel	1198	4	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	112	junction_1	253.536322184153	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	-54	True	NA	28	True	AATAAA	-17	NA	6009226	6023834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_6009379_6015145_6015353_6017813_6018046_6023302
transcript_125236.known	chr7	+	860	3	FSM	ENSG00000106305.10	ENST00000395236.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	242	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTAAGGGGACTT	35	True	NA	-59	True	TTTAAA	-36	NA	6009315	6023747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6009499_6017813_6018046_6023302
transcript_125240.known	chr7	+	5155	18	FSM	ENSG00000106346.12	ENST00000306177.10	5090	18	-65	0	-65	0	multi-exon	FALSE	canonical	3	101	junction_14	19.5959179422654	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCGTCTTTTTACTG	-50	True	NA	23	True	TATAAA	-16	NA	6104883	6161564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6105033_6111124_6111375_6115322_6115524_6135840_6135952_6139091_6139195_6140127_6140196_6140913_6140985_6142931_6143015_6144084_6144197_6145515_6145657_6146147_6146249_6147738_6147893_6149582_6150303_6150411_6150507_6153755_6155196_6156753_6157056_6159449_6159494_6160554
transcript_125242.nic	chr7	+	952	3	ISM	ENSG00000106346.12	ENST00000404008.6	1380	12	12	29622	12	572	5prime_fragment	FALSE	canonical	3	141	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCTAGCATGGCAGCAC	28	True	NA	NA	False	AATAAA	-9	NA	6104961	6115953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_6105033_6111124_6111375_6115322
transcript_125243.nic	chr7	+	1119	3	ISM	ENSG00000106346.12	ENST00000404008.6	1380	12	12	29455	12	739	5prime_fragment	FALSE	canonical	3	141	junction_1	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCTGATGCCAGCAACTT	28	True	NA	NA	False	NA	NA	NA	6104961	6116120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_6105033_6111124_6111375_6115322
transcript_125245.nic	chr7	-	1991	5	ISM	ENSG00000008256.16	ENST00000350796.8	4482	13	53	14485	53	-5138	5prime_fragment	FALSE	canonical	3	67	junction_4	11.4318633651737	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCAATTGTATT	6867	False	NA	NA	False	NA	NA	NA	6272571	6176263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_6177942_6187049_6187117_6187656_6187722_6190448_6190532_6272473
transcript_125247.known	chr7	-	558	2	FSM	ENSG00000178397.13	ENST00000530143.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGAGTGTTTTGCTCG	-32	True	NA	NA	False	NA	NA	NA	6348975	6330827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6331236_6348825
transcript_125249.known	chr7	+	2309	6	FSM	ENSG00000136238.18	ENST00000348035.9	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	2693	junction_1	50.6201540890582	4453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGGTAATACTGGTGTT	1	True	NA	14	True	AATAAA	-14	NA	6374526	6403967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6400125_6400189_6401867_6402028_6402315
transcript_125253.known	chr7	-	2839	15	FSM	ENSG00000164535.15	ENST00000297056.11	2839	15	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_11	15.5169426822452	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGTGTACAGCTGC	1	True	NA	-14	True	AATAAA	-16	NA	6447954	6409128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6434761_6435021_6436361_6436534_6445952_6446105_6447747
transcript_125260.known	chr7	-	2044	13	FSM	ENSG00000164535.15	ENST00000425398.6	2044	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	39.7037641652387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCACCCAGAAGACCGT	21	True	NA	NA	False	NA	NA	NA	6447934	6409516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6432836_6432960_6436361_6436534_6445952_6446105_6447747
transcript_125271.known	chr7	-	2786	5	FSM	ENSG00000136240.10	ENST00000258739.9	2786	5	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_2	52.7019923722054	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGAGGTGTTTG	9	True	NA	-11	True	AATAAA	-18	NA	6484152	6461088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6463176_6466070_6466324_6469595_6469755_6474183_6474285_6483966
transcript_125277.known	chr7	-	524	3	FSM	ENSG00000164535.15	ENST00000483716.1	524	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	61	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAGGCCAGGAGCATGA	-16	True	NA	NA	False	NA	NA	NA	6447971	6445700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6445849_6445952_6446105_6447747
transcript_125278.nic	chr7	-	1093	5	ISM	ENSG00000215045.9	ENST00000435185.5	3215	21	27491	3658	27491	-3658	internal_fragment	FALSE	canonical	2	6	junction_4	4.32290411644765	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTGTTTGTTTAAT	-3	True	NA	-1	True	TATAAA	-19	NA	6503695	6501384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_6501900_6501988_6502119_6502785_6502873_6503007_6503164_6503490
transcript_12528.known	chr1	-	5441	11	FSM	ENSG00000157064.11	ENST00000287713.7	5441	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	3.49428104193123	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTGTCTTGGTCAAGA	6	True	NA	-2	True	AATAAA	-19	NA	183418380	183248236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_183252744_183261001_183261070_183261201_183261304_183278552_183278630_183283994_183284040_183284709_183284791_183286661_183286789_183290127_183290207_183292789_183292858_183293704_183293794_183418182
transcript_125284.known	chr7	+	1461	9	FSM	ENSG00000136247.15	ENST00000396707.6	1461	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	114.197676749573	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	-19	True	NA	22	True	NA	NA	NA	6577433	6588978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_125285.known	chr7	+	1348	8	FSM	ENSG00000136247.15	ENST00000405731.7	1348	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	118.47810440959	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCCCGTTTATTT	-19	True	NA	19	True	AAGAAA	-31	NA	6577433	6588931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577499_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_125287.known	chr7	+	1552	8	FSM	ENSG00000136247.15	ENST00000396713.6	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	74.6223143296854	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	-19	True	NA	22	True	NA	NA	NA	6577433	6588978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_125289.known	chr7	+	1485	8	FSM	ENSG00000136247.15	ENST00000396709.5	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	135.010506015991	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTTTGAGCTGTAGT	15	True	NA	7	True	AAGAAA	-19	NA	6577467	6588919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577721_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_125290.known	chr7	+	1942	8	FSM	ENSG00000136247.15	ENST00000396706.2	1942	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	111.987061934923	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	52	False	NA	NA	False	NA	NA	NA	6577504	6589374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_1253.known	chr1	+	567	4	FSM	ENSG00000171735.19	ENST00000473578.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	4416	junction_1	530.288181610297	6377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTTAAAATTTAAGTTT	10	True	NA	34	True	AATAAA	-19	NA	6785479	6872038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756
transcript_125302.known	chr7	+	1604	6	FSM	ENSG00000136247.15	ENST00000474097.5	1604	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	147.960805620948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGTACAGTTGAAAAA	15	True	NA	NA	False	ACTAAA	-36	NA	6577467	6584320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305
transcript_125305.known	chr7	+	532	3	FSM	ENSG00000228010.6	ENST00000430844.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACCTTTGGAAGCTAAT	-12	True	NA	NA	False	NA	NA	NA	6663973	6673601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6664044_6665043_6665109_6673204
transcript_125309.known	chr7	-	5075	5	FSM	ENSG00000164631.19	ENST00000405858.6	5075	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	6.72681202353685	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGGCATTTTCTTCTT	-18	True	NA	0	True	AGTAAA	-19	NA	6706947	6688432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6692704_6697338_6697435_6697684_6697812_6705158_6705224_6706431
transcript_125319.known	chr7	-	1814	15	FSM	ENSG00000146574.16	ENST00000316731.13	1814	15	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	430.015193134534	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTGGTGTTGAGTC	965	False	NA	0	True	AATAAA	-20	NA	6826275	6798936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824454_6824549_6824639_6824738_6826077
transcript_125323.known	chr7	-	631	4	FSM	ENSG00000146574.16	ENST00000496187.5	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	1995	junction_2	149.43746369487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTACTGATTGACAAATT	1035	False	NA	NA	False	NA	NA	NA	6826205	6823855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6824167_6824454_6824549_6824639_6824738_6826077
transcript_125324.known	chr7	-	748	3	FSM	ENSG00000146574.16	ENST00000464543.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	1995	junction_1	181	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGAATGCCTTACTT	8	True	NA	NA	False	TTTAAA	-12	NA	6826216	6824037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6824549_6824639_6824738_6826077
transcript_125338.nnic	chr7	+	2129	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	203.728219694769	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	-28	True	NA	28	True	AATAAA	-18	NA	7182621	7244350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_7182821_7215041_7215240_7234302_7234540_7238254_7238923_7243523
transcript_125343.known	chr7	+	6275	4	FSM	ENSG00000106392.11	ENST00000436587.7	6275	4	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	43.4383343245213	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCATCTGATTATTT	-1	True	NA	16	True	AATAAA	-15	NA	7182543	7248616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7182821_7234302_7234540_7238254_7238923_7243523
transcript_125347.nnic	chr7	+	1884	4	NNC	ENSG00000106392.11	novel	1777	3	NA	NA	614	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	199.419156552223	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	-6	True	NA	28	True	AATAAA	-18	NA	7183243	7244350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_7183396_7234302_7234540_7238254_7238923_7243523
transcript_125349.known	chr7	+	1777	3	FSM	ENSG00000106392.11	ENST00000223122.4	1777	3	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	3	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	NA	False	NA	28	True	AATAAA	-18	NA	7234257	7244350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7234540_7238254_7238923_7243523
transcript_12535.nnic	chr1	-	392	2	NNC	ENSG00000157064.11	novel	5441	11	NA	NA	-34	-119767	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATGTGAACTAATATTT	194	False	NA	NA	False	AATAAA	-15	NA	183418414	183402632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_183402793_183418182
transcript_125352.known	chr7	+	4877	13	FSM	ENSG00000164654.16	ENST00000340080.9	4877	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	96.7750470019117	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTATGTCTCTGG	-32	True	NA	NA	False	NA	NA	NA	7566883	7608932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7567073_7567606_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_125356.known	chr7	+	3095	12	FSM	ENSG00000164654.16	ENST00000405785.5	3095	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	97.4089954608619	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	-41	True	NA	9	True	AATAAA	-14	NA	7566874	7607223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_125358.nic	chr7	+	2866	11	NIC	ENSG00000164654.16	novel	3095	12	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	79.1646385705133	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	19	False	NA	9	True	AATAAA	-14	NA	7567005	7607223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_125359.nic	chr7	+	3124	11	NIC	ENSG00000164654.16	novel	4877	13	NA	NA	18	258	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	79.1646385705133	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAATTCTGTGATTCAG	19	False	NA	6	True	AATAAA	-24	NA	7567005	7607481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_12536.known	chr1	+	5788	22	FSM	ENSG00000116698.22	ENST00000347615.6	5788	22	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_14	60.9586678305347	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGATCTGTGTATCGAT	-1	True	NA	14	True	ATTAAA	-14	NA	183472501	183554186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542503_183544352_183544498_183544929_183545313_183545965_183546338_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183551817
transcript_125363.nnic	chr7	-	996	4	NNC	ENSG00000272894.5	novel	1578	3	NA	NA	188	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	12.3648246606609	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTACCATGCACGATT	199	False	NA	-14	True	ATTAAA	-22	NA	7566808	7552461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_7552923_7555155_7555190_7565913_7566055_7566448
transcript_125368.known	chr7	+	569	4	FSM	ENSG00000219545.12	ENST00000482067.3	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	44.2141254452566	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	51	False	NA	NA	False	AATAAA	-18	NA	7640793	7968020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7967698
transcript_125369.known	chr7	+	2157	4	FSM	ENSG00000219545.12	ENST00000636849.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.1682057859982	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATTTTTGATTA	33	True	NA	-4	True	AATAAA	-8	NA	7640775	7879185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7640822_7673321_7673454_7801669_7801744_7877280
transcript_12537.nic	chr1	+	974	4	ISM	ENSG00000116698.22	ENST00000508461.5	3985	22	69721	6134	-6720	0	internal_fragment	FALSE	canonical	3	126	junction_1	103.945498539699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAATGAAGCCTT	-5	True	NA	NA	False	NA	NA	NA	183542220	183546129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_183542503_183544352_183544498_183544929_183545313_183545965
transcript_125370.known	chr7	+	941	5	FSM	ENSG00000219545.12	ENST00000638342.1	941	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	55.8228223937128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCATTATGTTCACTACTC	14	True	NA	NA	False	CATAAA	-11	NA	7640756	7877661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7640829_7673318_7673454_7801669_7801744_7868329_7868609_7877280
transcript_125374.known	chr7	-	847	5	FSM	ENSG00000106399.11	ENST00000396682.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	954.033804432526	14165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGAGAGATTTCTGTGC	13	True	NA	-32	True	ATTAAA	-27	NA	7640972	7636931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640319_7640582_7640722
transcript_12538.known	chr1	+	4642	23	FSM	ENSG00000116698.22	ENST00000507469.5	4642	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	103.759735180021	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATCTGTGTATCGATTC	0	True	NA	16	True	ATTAAA	-16	NA	183472502	183554188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_183472650_183512836_183512869_183515873_183515992_183517687_183517821_183526595_183526768_183527955_183528028_183528891_183529043_183529397_183529534_183533163_183533327_183533675_183533833_183537144_183537216_183538379_183538441_183540983_183541104_183542075_183542365_183544352_183544498_183544929_183545313_183545965_183546338_183547102_183547253_183549207_183549289_183549763_183549924_183550750_183550922_183551044_183551191_183552976
transcript_125380.known	chr7	-	434	4	FSM	ENSG00000106399.11	ENST00000406109.5	434	4	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_3	1012.05083315458	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGATTTCTGTGCTTTCT	169	False	NA	-27	True	ATTAAA	-32	NA	7640816	7636926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640722
transcript_125393.known	chr7	-	1956	15	FSM	ENSG00000003147.19	ENST00000455539.5	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	132.887266170255	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	14	True	NA	-12	True	AATAAA	-37	NA	8262153	8113771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8227637_8227852_8228600_8228674_8232589_8232756_8235909_8236006_8262093
transcript_125395.known	chr7	-	2133	14	FSM	ENSG00000003147.19	ENST00000396675.7	2133	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	98.4303436160755	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATACCACTGTCTCCTTT	628	False	NA	-88	True	NA	NA	NA	8262052	8113308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8261999
transcript_125397.nic	chr7	-	1768	14	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_13	95.4833855865874	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	-1	True	NA	-12	True	AATAAA	-37	NA	8262590	8113771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262439
transcript_125399.known	chr7	-	2309	14	FSM	ENSG00000003147.19	ENST00000265577.11	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	104.561354826135	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAAGCCTCTTGTGAC	474	False	NA	-34	True	NA	NA	NA	8262206	8113254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262093
transcript_1254.known	chr1	+	8314	23	FSM	ENSG00000171735.19	ENST00000303635.12	8314	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1306.09049463094	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGTGTGTGTTTTGCTTT	-16	True	NA	19	True	ATTAAA	-22	NA	6785453	7769706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_7091303_7091372_7249490_7249627_7467829_7467902_7640399_7640554_7661725_7661867_7663352_7665200_7670910_7671038_7677598_7677734_7732447_7732600_7736343_7736541_7736930_7737010_7737254_7737571_7737958_7738483_7744834_7745023_7745844_7746092_7747709_7747782_7751198_7751393_7752458_7752534_7755637_7755669_7766458
transcript_125419.known	chr7	-	2440	14	FSM	ENSG00000003147.19	ENST00000406470.6	2440	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_5	39.6841076801138	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGTTTATGGAGTC	68	False	NA	34	True	ATTAAA	-22	NA	8262612	8113186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_12542.known	chr1	+	855	3	FSM	ENSG00000286966.1	ENST00000665299.1	855	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	8403	False	NA	NA	False	AATAAA	-22	NA	183613536	183619335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_183613790_183616000_183616199_183618931
transcript_125420.known	chr7	-	1615	8	FSM	ENSG00000003147.19	ENST00000407906.5	1615	8	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_6	29.8253419160311	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGGATACGTGCACAGTG	68	False	NA	NA	False	ATTAAA	-21	NA	8262612	8156556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_125421.known	chr7	+	429	2	FSM	ENSG00000244239.1	ENST00000458624.1	429	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATGTATAGGTATA	-7	True	NA	20	True	AATAAA	-19	NA	8262232	8262821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_8262420_8262579
transcript_125422.known	chr7	+	543	2	FSM	ENSG00000272328.1	ENST00000606016.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCTTTTGTACTCCCAA	NA	False	NA	NA	False	NA	NA	NA	8303753	8340523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_8304156_8340382
transcript_125423.known	chr7	+	3265	3	FSM	ENSG00000122584.13	ENST00000405863.6	3265	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACTTGTGTAAGATGG	0	True	NA	NA	False	AATAAA	-22	NA	8433608	8752961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_8434756_8435603_8435768_8751007
transcript_125425.known	chr7	-	2218	2	FSM	ENSG00000278254.4	ENST00000614289.1	2218	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TTAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	AATAGA	-38	NA	9189785	9082556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_9084549_9189559
transcript_125428.known	chr7	+	855	6	FSM	ENSG00000234710.3	ENST00000657272.2	860	6	0	5	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGTTCCATTTTTATT	NA	False	NA	NA	False	AATAAA	-15	NA	9621763	9769513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_9622043_9716789_9716910_9740953_9741019_9743246_9743303_9760555_9760610_9769232
transcript_125436.known	chr7	-	502	4	FSM	ENSG00000189043.10	ENST00000470761.5	502	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5655.29008981856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAAGAAGGAACGTCCA	324	False	NA	NA	False	NA	NA	NA	10939834	10933664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10939507
transcript_12544.known	chr1	-	7266	4	FSM	ENSG00000162704.16	ENST00000359856.11	7266	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	429.392076726569	1729	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGAGTTTATTAATC	1	True	NA	NA	False	AATAAA	-20	NA	183635783	183620845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_183627595_183630460_183630638_183633081_183633155_183635516
transcript_125442.known	chr7	-	2035	4	FSM	ENSG00000189043.10	ENST00000339600.6	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	11218	junction_2	589.835570307522	29264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTTTCTAGAATTGAG	5	True	NA	NA	False	AATAAA	-23	NA	10940153	10931942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10940015
transcript_125443.known	chr7	-	434	3	FSM	ENSG00000189043.10	ENST00000486007.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	11218	junction_1	271.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCATTTACCATTTTCTT	79	False	NA	NA	False	AAGAAA	-20	NA	10940079	10937866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_10938148_10938807_10938897_10940015
transcript_125447.known	chr7	+	3427	18	FSM	ENSG00000106443.17	ENST00000634607.2	3427	18	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	23.9883189566668	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	-24	True	NA	12	True	AATAAA	-17	NA	10973871	11169618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_125451.known	chr7	+	2627	17	FSM	ENSG00000106443.17	ENST00000423760.6	2627	17	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	44.2658428559764	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	-7	True	NA	17	True	AATAAA	-22	NA	10973888	11169623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_125457.nic	chr7	+	754	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-35	80511	0	-32658	5prime_fragment	FALSE	canonical	3	148	junction_2	16.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAGAAGAAAATG	-24	True	NA	20	True	ATTAAA	-9	NA	10973871	10982561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_125458.nic	chr7	+	883	3	ISM	ENSG00000106443.17	ENST00000490957.5	4058	16	-98	80445	-63	-32592	5prime_fragment	FALSE	canonical	3	148	junction_2	16.5	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGGAGAAAGAGAAGG	474	False	NA	-18	True	AAAAAG	-24	NA	10973808	10982627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_10974325_10974834_10974946_10982371
transcript_125467.nnic	chr7	+	1253	5	NNC	ENSG00000230333.6	novel	929	5	NA	NA	8724	4080	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.06155281280883	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTAGGTTTATTTCGA	NA	False	NA	NA	False	AATAAA	-17	NA	11235741	11326404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_11235867_11244257_11244480_11248292_11248376_11322248_11322425_11325757
transcript_12547.nnic	chr1	+	1118	3	NNC	ENSG00000143344.16	novel	5100	19	NA	NA	-38	-206291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAAATGAACTTGAAG	2930	False	NA	NA	False	NA	NA	NA	183636046	183722240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_183636502_183697402_183697513_183721687
transcript_125474.known	chr7	+	12351	8	FSM	ENSG00000106460.19	ENST00000396668.8	12351	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_3	23.2071417579035	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCTATTTATATCAG	10	True	NA	NA	False	AATAAA	-18	NA	12211293	12243367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12211426_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
transcript_125480.nic	chr7	+	842	6	ISM	ENSG00000106460.19	ENST00000396668.8	12351	8	-1	12854	-1	-426	5prime_fragment	FALSE	canonical	3	187	junction_3	24.3014402865345	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAATTTCCGTTATCA	9	True	NA	NA	False	AATAAA	-19	NA	12211292	12230513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_12211426_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388
transcript_125485.known	chr7	-	5220	29	FSM	ENSG00000146530.15	ENST00000275358.8	5220	29	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_19	16.3888884084707	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTATGTCTGCATCA	-5	True	NA	0	True	AATAAA	-23	NA	12403865	12330884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_12331198_12333464_12333569_12336140_12336237_12336987_12337084_12337176_12337273_12340321_12340418_12342058_12342155_12343082_12343179_12344194_12344291_12344373_12344470_12351572_12351714_12356110_12356331_12357264_12357516_12359577_12359693_12361146_12361252_12361365_12361522_12367356_12367494_12369544_12370510_12370655_12370865_12372976_12373248_12374688_12374763_12375009_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
transcript_12549.known	chr1	+	1632	6	FSM	ENSG00000198860.14	ENST00000462677.3	1632	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	176.219635682293	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGCTTTGTTCCAG	27	True	NA	NA	False	CATAAA	-6	NA	184051755	184073846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184070615_184070733_184072156_184072299_184072826
transcript_125490.nic	chr7	-	2066	8	NIC	ENSG00000146530.15	novel	5936	30	NA	NA	-29	3124	intron_retention	FALSE	canonical	3	54	junction_5	10.3883765501131	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATCTTTTTTGCTAGAC	NA	False	NA	NA	False	AATAAA	-17	NA	12403970	12374439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
transcript_125491.known	chr7	-	1394	8	FSM	ENSG00000146530.15	ENST00000326715.4	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	25.6729827019832	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATAGT	175	False	NA	NA	False	NA	NA	NA	12403724	12377563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12388807_12388958_12389126_12389359_12393593_12393779_12403658
transcript_125499.known	chr7	+	9682	16	FSM	ENSG00000006747.15	ENST00000297029.10	9682	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	3.04338992280355	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTT	-1	True	NA	NA	False	AATAAA	-22	NA	12570719	12660182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12570986_12578063_12578219_12581059_12581222_12604513_12604664_12622800_12622894_12625009_12625143_12625761_12625851_12626583_12626800_12629100_12629223_12636044_12636136_12640346_12640518_12644137_12644316_12644583_12644706_12649466_12649545_12651840_12651902_12652587
transcript_1255.known	chr1	+	486	4	FSM	ENSG00000171735.19	ENST00000557126.5	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	2134.62882539851	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATAGAATAAAGTGAC	21	True	NA	-29	True	ACTAAA	-2	NA	6785490	6887865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6887653
transcript_125500.known	chr7	+	1296	3	FSM	ENSG00000122644.13	ENST00000396662.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	17.5	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGTTTTGTGCTTAC	-28	True	NA	16	True	AATAAA	-17	NA	12686855	12689179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12687044_12687634_12687729_12688165
transcript_125501.known	chr7	+	1144	2	FSM	ENSG00000122644.13	ENST00000396664.2	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	24	True	NA	13	True	AATAAA	-14	NA	12686907	12689176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12687044_12688168
transcript_125506.known	chr7	+	840	2	FSM	ENSG00000122644.13	ENST00000404894.1	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGAGTGTCTACAGCG	2	True	NA	NA	False	NA	NA	NA	12687634	12688914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12687729_12688168
transcript_125513.known	chr7	+	431	2	FSM	ENSG00000213875.3	ENST00000436455.1	431	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAAGTAATCTTATATA	NA	False	NA	NA	False	AATACA	-27	NA	13871855	13872513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_13872197_13872423
transcript_125515.known	chr7	-	6459	14	FSM	ENSG00000006468.14	ENST00000430479.6	6459	14	0	0	0	0	multi-exon	FALSE	non_canonical	1	35	junction_13	50.5300894599287	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGACTGTCGTGATCAC	6	True	NA	-1	True	AATAAA	-18	NA	13989666	13891228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_125516.known	chr7	-	3391	13	FSM	ENSG00000006468.14	ENST00000405218.6	3391	13	0	0	0	0	multi-exon	FALSE	non_canonical	1	50	junction_4	41.3671736471753	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGTTCTGTTTT	1490	False	NA	-11	True	TTTAAA	-6	NA	13989947	13894380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_125517.known	chr7	-	4181	12	FSM	ENSG00000006468.14	ENST00000405358.8	4181	12	0	0	0	0	multi-exon	FALSE	non_canonical	1	7	junction_11	54.1056511614388	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTTTGAATTTCT	4	True	NA	-6	True	AATAAA	-24	NA	13988873	13893267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988679
transcript_12552.known	chr1	+	1834	5	FSM	ENSG00000198860.14	ENST00000533373.6	1834	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	142.903813804951	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	-30	True	NA	17	True	AATAAA	-19	NA	184051698	184074212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072195_184072826
transcript_125522.known	chr7	-	3363	10	FSM	ENSG00000006468.14	ENST00000403527.5	3363	10	0	0	0	0	multi-exon	FALSE	non_canonical	1	9	junction_9	56.1901533485479	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTAAACACAAAGTCAAAA	4923	False	NA	NA	False	AAAAAG	-17	NA	13986514	13894154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986115
transcript_125525.nic	chr7	-	1951	9	ISM	ENSG00000006468.14	ENST00000430479.6	6459	14	-56	39568	-46	845	5prime_fragment	FALSE	canonical	3	35	junction_8	51.1112450934234	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATTGGTGGCAAAGAT	1715	False	NA	NA	False	NA	NA	NA	13989722	13930796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_125532.known	chr7	-	622	6	FSM	ENSG00000006468.14	ENST00000483075.1	622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.1039228574265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAACTCCAATCTTTAAC	1798	False	NA	NA	False	AAAACA	-10	NA	13989639	13974863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13975087_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_125538.known	chr7	-	536	2	FSM	ENSG00000006468.14	ENST00000493831.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATTTGTACTTTTTTC	NA	False	NA	NA	False	AATAAA	-11	NA	13906498	13900372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13900840_13906429
transcript_12554.known	chr1	+	1907	5	FSM	ENSG00000198860.14	ENST00000645668.2	1907	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	82.1747376022583	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	1	True	NA	17	True	AATAAA	-19	NA	184051729	184074212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072299_184072826
transcript_125544.nic	chr7	-	2399	2	ISM	ENSG00000136267.14	ENST00000477401.5	1959	15	-107	218269	-41	-103236	5prime_fragment	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAGAGTAAAGA	705	False	NA	NA	False	NA	NA	NA	14902949	14839409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_14841451_14902591
transcript_125550.known	chr7	+	697	2	FSM	ENSG00000229108.3	ENST00000442176.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTACAACAGGTCTTGACA	NA	False	NA	NA	False	AGTAAA	-7	NA	15688377	15695491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_15688453_15694869
transcript_125551.nnic	chr7	-	926	3	NNC	ENSG00000214960.11	novel	1709	9	NA	NA	84593	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGATACCAGGGAACGGA	NA	False	NA	NA	False	AATAAA	-10	NA	16216873	16091191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_16091800_16216065_16216198_16216687
transcript_125552.known	chr7	-	1758	2	FSM	ENSG00000171243.8	ENST00000307068.5	1758	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATTTTTTTTTCTAAG	-2	True	NA	62	True	AATAAA	-14	NA	16465738	16461480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_16462964_16465463
transcript_125553.known	chr7	-	2599	11	FSM	ENSG00000106524.9	ENST00000447802.3	2599	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	49.0183639057853	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTCATCTTGTTTTA	6	True	NA	-21	True	AATAAA	-17	NA	16645755	16599781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_16600946_16602379_16602510_16603548_16603661_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
transcript_125559.known	chr7	-	2489	10	FSM	ENSG00000106524.9	ENST00000306999.7	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	9.31081940672739	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCATCTTGTTTTATAA	7	True	NA	-18	True	AATAAA	-20	NA	16645754	16599778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_16600946_16602379_16602510_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
transcript_12556.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000645963.2	609	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	193.532297046255	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	27	True	NA	11	True	AATAAA	-18	NA	184051755	184095845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184093624_184093725_184095689
transcript_125562.nic	chr7	-	688	3	ISM	ENSG00000106524.9	ENST00000628652.1	1270	9	1	23220	0	225	5prime_fragment	FALSE	canonical	3	134	junction_1	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGGTGATTTGTTTCT	-6	True	NA	NA	False	AATAAA	-10	NA	16645816	16626865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_16627179_16636390_16636456_16645506
transcript_125574.known	chr7	+	1804	12	FSM	ENSG00000136261.16	ENST00000258761.8	1804	12	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	59.9545282238586	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTTATATTGTCAGA	13	True	NA	17	True	AATAAA	-15	NA	16646180	16706517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_125588.known	chr7	+	1711	11	FSM	ENSG00000136261.16	ENST00000437745.5	1711	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	208.983635722991	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTCAGAGCTTTT	-8	True	NA	23	True	AATAAA	-21	NA	16646159	16706523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_12559.known	chr1	+	1844	4	FSM	ENSG00000198860.14	ENST00000423085.7	1844	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	169.723304233685	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	-4	True	NA	17	True	AATAAA	-19	NA	184051650	184074212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072826
transcript_125591.known	chr7	+	1689	11	FSM	ENSG00000136261.16	ENST00000405202.5	1689	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	167.06708233521	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGTTTTTTAAAATA	27	True	NA	-19	True	NA	NA	NA	16646194	16706481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16646289_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_1256.known	chr1	-	286	1	FSM	ENSG00000227950.1	ENST00000433407.1	286	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGAATTTCAACAATTA	NA	False	NA	NA	False	NA	NA	NA	6834618	6834332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6834300_6834600
transcript_12560.known	chr1	+	2219	4	FSM	ENSG00000198860.14	ENST00000643231.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	150.869332720588	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAAACCGACTTCTTT	0	True	NA	NA	False	NA	NA	NA	184051685	184097485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095689
transcript_12561.known	chr1	+	1110	4	FSM	ENSG00000198860.14	ENST00000643702.1	1110	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	162.899423639933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATTGTACAAAGTATAAA	23	False	NA	NA	False	NA	NA	NA	184051793	184073615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184072156_184072299_184072826
transcript_125621.known	chr7	+	1873	6	FSM	ENSG00000106537.8	ENST00000262067.5	1873	6	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_5	27.9814224084481	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGAGGTGGAATTCTT	-12	True	NA	20	True	ATTAAA	-30	NA	16753754	16784536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16754031_16776210_16776379_16777041_16777123_16777797_16777912_16779002_16779117_16783416
transcript_125624.known	chr7	-	6357	26	FSM	ENSG00000071189.21	ENST00000428135.7	6357	26	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_19	16.9802709047883	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGAGTTCATTTAA	-2	True	NA	-24	True	AATAAA	-14	NA	17940494	17790760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_125637.known	chr7	-	4146	6	FSM	ENSG00000071189.21	ENST00000409604.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	56.687211961782	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATCATTACTTTTC	8	True	NA	NA	False	AATAAA	-28	NA	17940484	17879426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_17882944_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_125638.known	chr7	-	6817	25	FSM	ENSG00000071189.21	ENST00000611725.4	6817	25	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	30.5890945981298	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGAGCTTCTGTATT	24	False	NA	-23	True	AATAAA	-17	NA	17940468	17792841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821682_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_125640.known	chr7	+	2359	11	FSM	ENSG00000048052.24	ENST00000428307.6	2359	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	22.280260321639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATATATAGATGCAAA	6	True	NA	NA	False	AATACA	-7	NA	18495755	18667105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_18495855_18496261_18496325_18585280_18585523_18590344_18590487_18591515_18591643_18593907_18594030_18634626_18634743_18644670_18644794_18647784_18647999_18648465_18648684_18666212
transcript_125641.known	chr7	+	728	5	FSM	ENSG00000048052.24	ENST00000461409.1	728	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	20.9806458432528	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATAGAAAGAGCATTC	11	True	NA	NA	False	AATATA	-19	NA	18495760	18506036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_18496024_18496261_18496325_18502352_18502487_18502580_18502640_18505827
transcript_125644.nic	chr7	+	413	3	NIC	ENSG00000048052.24	novel	728	5	NA	NA	-7	-3457	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	18	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAACTATGGGTGTTGAC	-18	True	NA	NA	False	AATAAA	-33	NA	18495731	18502579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_18495855_18496261_18496325_18502352
transcript_125645.nic	chr7	+	582	3	ISM	ENSG00000048052.24	ENST00000461409.1	728	5	-29	3457	-7	-3457	5prime_fragment	FALSE	canonical	2	5	junction_2	23	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAACTATGGGTGTTGAC	-18	True	NA	NA	False	AATAAA	-33	NA	18495731	18502579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_18496024_18496261_18496325_18502352
transcript_125651.known	chr7	-	3893	4	FSM	ENSG00000105849.6	ENST00000222567.6	3893	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	50.3940031705714	1336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGCCTCTGATGTGA	4	True	NA	-3	True	AATAAA	-21	NA	19709037	19695460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_19698728_19700071_19700281_19704778_19704921_19708762
transcript_125664.known	chr7	-	4274	5	FSM	ENSG00000173452.14	ENST00000405844.6	4274	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGTTGGCTTTCTT	-16	True	NA	NA	False	AATAAA	-20	NA	19773617	19719314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_19722135_19724279_19724354_19725513_19725769_19729381_19729439_19772549
transcript_125665.known	chr7	-	775	5	FSM	ENSG00000173452.14	ENST00000422233.5	775	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATTTGACTAGCATGAT	3	True	NA	NA	False	AATAAA	-30	NA	19773598	19721777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_19722135_19724279_19724354_19725513_19725769_19729381_19729439_19773566
transcript_125666.known	chr7	-	3975	4	FSM	ENSG00000173452.14	ENST00000405764.7	3975	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGTGTTGGCTTTCT	208	False	NA	NA	False	AATAAA	-19	NA	19773393	19719315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_19722135_19725513_19725769_19729381_19729439_19772549
transcript_12567.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000647465.1	609	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	197.512657822227	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	-11	True	NA	11	True	AATAAA	-18	NA	184051717	184095845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095030_184095093_184095689
transcript_12575.known	chr1	+	10293	6	FSM	ENSG00000116667.15	ENST00000235307.7	10293	6	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	35.8139637571716	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTGGCTTTGTTCTCTTT	14	True	NA	10	True	ATTAAA	-16	NA	184387028	184629019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184387369_184477385_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_12578.known	chr1	+	2656	6	FSM	ENSG00000116667.15	ENST00000675061.1	2656	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	189.946729374317	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCCTCTACCCAAA	144	False	NA	NA	False	NA	NA	NA	184387288	184621652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184387369_184477385_184477604_184507597_184507683_184590738_184590816_184598400_184598462_184619517
transcript_125839.known	chr7	-	566	4	ISM	ENSG00000243004.7	ENST00000457921.6	955	7	154879	0	121	0	3prime_fragment	FALSE	canonical	3	224	junction_1	67.3102270584988	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	NA	False	NA	-1	True	AATAAA	-14	NA	19968237	19918980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136
transcript_125840.known	chr7	-	743	6	FSM	ENSG00000243004.7	ENST00000415499.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	203.355255648828	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCACAGTATCACAAAC	248	False	NA	-33	True	TATAAA	-12	NA	20125162	19931070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_125842.known	chr7	+	483	1	FSM	ENSG00000213860.4	ENST00000396599.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4680	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	43	False	NA	NA	False	NA	NA	NA	20002764	20003247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20002800_20003200
transcript_125845.nnic	chr7	+	1163	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24789	5439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5973853695808	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	NA	False	NA	7	True	AATAAA	-20	NA	20120925	20135914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128961_20129003_20130211_20130514_20135482
transcript_125846.nnic	chr7	+	1065	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24880	5439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.73488351136175	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	NA	False	NA	7	True	AATAAA	-20	NA	20121016	20135914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128968_20129003_20130211_20130514_20135482
transcript_125847.nnic	chr7	+	526	2	Genic_Genomic	ENSG00000267055.1	novel	670	5	NA	NA	24789	-1376	multi-exon	FALSE	canonical	3	32	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTGGATCATGCTTAC	NA	False	NA	NA	False	ATTAAA	-20	NA	20120925	20129099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_20121314_20128961
transcript_125849.nnic	chr7	+	1157	6	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20882	0	multi-exon	FALSE	canonical	0	0	junction_2	11.5412304370028	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGGTAATCTGGAGAA	NA	False	NA	5	True	AATAAA	-16	NA	20121033	20153531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20130211_20130514_20147426_20147538_20150434_20150590_20153263
transcript_125856.nnic	chr7	+	1079	5	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20882	11	multi-exon	FALSE	canonical	1	3	junction_4	10.779030568655	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGAGAAAAATATGTGTT	NA	False	NA	16	True	AATAAA	-27	NA	20121033	20153542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20147426_20147538_20150434_20150590_20153050
transcript_125857.nnic	chr7	+	855	5	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20882	0	multi-exon	FALSE	canonical	2	10	junction_2	7.98044484975618	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGGTAATCTGGAGAA	NA	False	NA	5	True	AATAAA	-16	NA	20121033	20153531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20147426_20147538_20150434_20150590_20153263
transcript_12586.known	chr1	+	644	4	FSM	ENSG00000116667.15	ENST00000367514.7	644	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	227.597598112692	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAACTGGTTCTGCTTC	22	False	NA	NA	False	NA	NA	NA	184568398	184619936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184568486_184590738_184590816_184598400_184598462_184619517
transcript_125862.nnic	chr7	+	732	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24960	5439	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	12.657891697365	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	NA	False	NA	7	True	AATAAA	-20	NA	20121096	20135914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128961_20129003_20130471_20130514_20135482
transcript_125865.nnic	chr7	+	744	4	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20882	0	multi-exon	FALSE	canonical	1	1	junction_2	12.657891697365	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGGTAATCTGGAGAA	NA	False	NA	5	True	AATAAA	-16	NA	20121033	20153531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20150434_20150590_20153263
transcript_125869.known	chr7	-	304	4	FSM	ENSG00000183742.13	ENST00000471019.1	304	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTACTTGAAAAGAAA	19	True	NA	NA	False	TTTAAA	-4	NA	20217357	20164368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_20164400_20170713_20170782_20198524_20198671_20217298
transcript_125871.nnic	chr7	+	753	3	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24897	5439	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	8	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	NA	False	NA	7	True	AATAAA	-20	NA	20121033	20135914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128961_20129003_20135482
transcript_125877.nic	chr7	-	333	3	ISM	ENSG00000183742.13	ENST00000400331.10	9153	7	-38	29601	-18	113	5prime_fragment	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGTTTAAAGTAACTGG	-1	True	NA	NA	False	NA	NA	NA	20217422	20164255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_20164400_20170713_20170779_20217298
transcript_125882.known	chr7	-	2994	5	FSM	ENSG00000183742.13	ENST00000332878.8	2994	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAAAGTGCCCTC	2699	False	20217421	NA	False	AATACA	-33	NA	20217404	20140624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_20141159_20154192_20154382_20158203_20160246_20161747_20161871_20217298
transcript_125887.nnic	chr7	+	838	4	FSM	ENSG00000233834.7	ENST00000685385.1	817	4	-23	2	-20	0	multi-exon	FALSE	canonical	2	4	junction_2	16.3367343397905	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTATGTGTCTGTG	9470	False	NA	NA	False	ATTAAA	-31	NA	20217515	20221700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20217623_20218255_20218364_20219491_20219757_20221342
transcript_125888.known	chr7	+	667	4	FSM	ENSG00000233834.7	ENST00000439058.6	727	4	41	19	0	-16	multi-exon	FALSE	canonical	3	17	junction_2	11.5758369027902	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	6	True	NA	NA	False	ATTAAA	-12	NA	20217576	20221681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20217623_20218255_20218364_20219582_20219757_20221342
transcript_12589.nnic	chr1	+	832	3	NNC	ENSG00000286378.1	novel	3414	2	NA	NA	-108	5068	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCAGCTCTGTGTGAATT	NA	False	NA	NA	False	AATAAA	-17	NA	184664173	184673603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_184664429_184665268_184665602_184673359
transcript_125890.known	chr7	+	740	5	FSM	ENSG00000233834.7	ENST00000430859.2	798	5	50	8	9	-5	multi-exon	FALSE	canonical	3	17	junction_1	11.1579568022107	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAATATATGTGTATG	15	False	NA	NA	False	ATTAAA	-23	NA	20217585	20221692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219582_20219757_20221342
transcript_125895.known	chr7	-	666	4	FSM	ENSG00000271133.6	ENST00000603156.2	924	4	30	228	30	-228	multi-exon	FALSE	canonical	3	8	junction_2	6.64997911442	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAACTCTCTGAAAG	8	True	NA	60	True	NA	NA	NA	20331747	20328528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_20328857_20329366_20329514_20329689_20329783_20331649
transcript_125902.known	chr7	-	737	3	FSM	ENSG00000271133.6	ENST00000605357.6	840	3	100	3	96	2	multi-exon	FALSE	canonical	3	13	junction_2	5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTGATTAATTTGT	122	False	NA	NA	False	AATAAA	-20	NA	20331681	20328298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_20328857_20329366_20329514_20331649
transcript_125908.known	chr7	+	428	1	FSM	ENSG00000219451.3	ENST00000405810.2	428	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTATATTTGTAAAAGCA	11	False	NA	NA	False	NA	NA	NA	20827325	20827753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20827300_20827800
transcript_12591.known	chr1	-	2260	2	FSM	ENSG00000285847.2	ENST00000653410.1	2260	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAATTATAATGTTCAT	NA	False	NA	NA	False	AATGAA	-36	NA	184672166	184663024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_184665147_184672028
transcript_12592.known	chr1	-	6884	14	FSM	ENSG00000135842.17	ENST00000367511.4	6884	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.04423890673421	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGACCAGATGTCATTT	-12	True	NA	-6	True	AATAAA	-16	NA	184974508	184791031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_184796098_184798078_184798191_184803584_184803693_184805945_184806057_184808073_184808236_184818637_184818826_184823166_184823330_184823637_184823743_184831846_184831963_184884632_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
transcript_125921.known	chr7	+	447	6	FSM	ENSG00000232790.3	ENST00000447262.2	447	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGTAGTAGAAAGATCAAGA	54	False	NA	NA	False	NA	NA	NA	20835430	21023148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20835505_20882739_20882817_21020867_21021004_21021858_21021908_21022056_21022151_21023131
transcript_125924.known	chr7	+	5637	6	FSM	ENSG00000105866.15	ENST00000649633.1	5637	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	36.1530081735946	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCACTTGTAAATTTT	-3	True	NA	21	True	TATAAA	-14	NA	21428200	21514505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_21428259_21428681_21428793_21429288_21430844_21477078_21477308_21481923_21482124_21511021
transcript_125927.nic	chr7	+	2148	7	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-31	331055	-31	68	5prime_fragment	FALSE	canonical	3	27	junction_6	5.01386965216377	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTGTGTAAAAGTTT	NA	False	NA	29	True	AATAAA	-14	NA	21543007	21570784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185_21564398_21570068
transcript_125928.nic	chr7	+	1946	6	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-31	336928	-31	3465	5prime_fragment	FALSE	canonical	3	28	junction_1	4.58693797647189	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAAAAGGACCACCTT	NA	False	NA	NA	False	NA	NA	NA	21543007	21564911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185
transcript_125930.nic	chr7	+	1934	6	NIC	ENSG00000105877.19	novel	14343	82	NA	NA	-31	66	combination_of_known_junctions	FALSE	canonical	3	5	junction_5	12.8467894822014	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTCTGTGTAAAAGT	NA	False	NA	27	True	AATAAA	-12	NA	21543007	21570782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21570068
transcript_125933.nic	chr7	+	1258	6	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	57689	286268	-17466	-20507	internal_fragment	FALSE	canonical	2	6	junction_2	1.16619037896906	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACATGTGTAGTCATCT	NA	False	NA	NA	False	AATAAA	-24	NA	21600727	21615571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_21600931_21601009_21601180_21601395_21601619_21606425_21606543_21606646_21606734_21615113
transcript_125936.nic	chr7	+	870	2	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-31	356553	-31	137	5prime_fragment	FALSE	canonical	3	28	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGCTTGTAGAA	NA	False	NA	NA	False	NA	NA	NA	21543007	21545286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_21543597_21545005
transcript_125937.known	chr7	-	2883	10	FSM	ENSG00000164649.20	ENST00000406877.8	2883	10	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_8	154.38631999782	2815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	1	True	NA	-2	True	AATAAA	-26	NA	21945899	21900898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21945780
transcript_125938.known	chr7	-	2915	11	FSM	ENSG00000164649.20	ENST00000356195.9	2915	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	414.930307401135	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCTTGTCAGTGGTA	22	True	NA	-3	True	AATAAA	-25	NA	21945878	21900899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21940261_21940316_21945780
transcript_125939.known	chr7	-	6159	16	FSM	ENSG00000136237.19	ENST00000401957.6	6159	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.8427033281447	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGATGCTCAGGGGGTT	898	False	NA	53	True	ATTAAA	-18	NA	22193909	22118237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22122522_22125603_22125659_22131036_22131102_22136037_22136126_22136932_22136984_22140024_22140116_22145043_22145223_22146896_22147020_22150406_22150505_22154454_22154605_22156809_22156889_22157854_22157886_22160517_22160616_22162396_22162542_22167069_22167149_22193366
transcript_125954.known	chr7	-	1261	5	FSM	ENSG00000105889.16	ENST00000678116.1	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	10.7354552767919	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-11	True	NA	-36	True	ATTAAA	-18	NA	22500188	22419443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22419837_22492564_22492730_22493323_22493837_22494771_22494887_22500113
transcript_125955.known	chr7	-	1193	5	FSM	ENSG00000105889.16	ENST00000406890.6	1193	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	24.1078306780183	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	0	True	NA	-36	True	ATTAAA	-18	NA	22500177	22419443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22419837_22492564_22492730_22493323_22493780_22494771_22494887_22500113
transcript_125956.known	chr7	-	1054	4	FSM	ENSG00000105889.16	ENST00000483679.1	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	10.6562449087639	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGTGTTTCCTAGACA	-24	True	NA	NA	False	NA	NA	NA	22500201	22492391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22492730_22493323_22493837_22494771_22494887_22500113
transcript_125958.known	chr7	-	1384	1	FSM	ENSG00000233476.3	ENST00000434005.1	1384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2508	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATATTATCCCTAATAC	63	False	NA	NA	False	NA	NA	NA	22511999	22510615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22510600_22512000
transcript_125959.known	chr7	+	2432	4	FSM	ENSG00000232759.1	ENST00000435127.1	2432	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTGTTCATTCATTTA	9	True	NA	NA	False	ATTAAA	-17	NA	22563336	22573996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22563431_22564965_22565153_22571774_22572014_22572084
transcript_125960.known	chr7	+	557	2	FSM	ENSG00000232949.2	ENST00000439823.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTCATGTTTCCCGA	2	True	NA	NA	False	AAGAAA	-26	NA	22589704	22591622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22589802_22591162
transcript_125961.known	chr7	+	985	4	FSM	ENSG00000136244.12	ENST00000485300.1	985	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAATTATTTTTAATT	0	True	NA	NA	False	ACTAAA	-20	NA	22727199	22731694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22727635_22728692_22728807_22729513_22729661_22731405
transcript_125962.known	chr7	-	1364	2	FSM	ENSG00000179428.2	ENST00000325042.2	1364	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCGTGTTCATGATAAAAT	4	True	NA	NA	False	AATAAA	-21	NA	22727620	22725394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22726706_22727567
transcript_125963.known	chr7	+	1527	6	FSM	ENSG00000136244.12	ENST00000404625.5	1527	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.72046505340853	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTGTGTCACGTGAA	2278	False	NA	NA	False	AATAAA	-24	NA	22725883	22732002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22726259_22727178_22727282_22727443_22727635_22728692_22728807_22729513_22729661_22731405
transcript_125964.nnic	chr7	-	907	2	Genic_Genomic	ENSG00000234513.1_ENSG00000233476.3	novel	348	1	NA	NA	-26	309	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAAATTTTGAACAGA	NA	False	NA	NA	False	ATTAAA	-27	NA	22774019	22510306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_-_22510762_22773567
transcript_125971.known	chr7	-	434	3	FSM	ENSG00000196683.12	ENST00000358435.9	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	5429	junction_2	46	57808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTGAGTCTTTTTTG	-7	True	NA	-5	True	AATAAA	-15	NA	22822849	22812973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22813186_22817999_22818049_22822676
transcript_125977.known	chr7	-	731	2	FSM	ENSG00000196683.12	ENST00000463284.2	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	0	5446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGGCGGCTCTGTTGC	-7	True	NA	NA	False	AATAAA	-1	NA	22822849	22812627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22813186_22822676
transcript_125978.known	chr7	-	514	4	FSM	ENSG00000196683.12	ENST00000372879.8	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2553.83559028811	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAGTCTTTTTTGA	15	True	NA	-4	True	AATAAA	-16	NA	22822791	22812972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22813186_22817411_22817549_22817999_22818049_22822676
transcript_125979.known	chr7	-	455	3	FSM	ENSG00000196683.12	ENST00000405021.7	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_2	2559	2117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGTCTTTTTTGAAT	498	False	NA	-2	True	AATAAA	-18	NA	22822344	22812970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22813186_22817999_22818049_22822153
transcript_12598.nic	chr1	-	1191	5	ISM	ENSG00000135842.17	ENST00000367511.4	6884	14	-32	93195	-32	3512	5prime_fragment	FALSE	canonical	3	38	junction_1	3.08220700148449	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGAGCCACAG	-1	True	NA	NA	False	NA	NA	NA	184974540	184884226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
transcript_125980.known	chr7	+	955	6	FSM	ENSG00000228649.10	ENST00000658124.1	955	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.54718490564528	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	14	False	NA	NA	False	AATATA	-33	NA	22854272	22861436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858796_22860546_22860639_22860885
transcript_125981.known	chr7	+	1063	6	FSM	ENSG00000228649.10	ENST00000661147.1	1063	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	6.8585712797929	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	NA	False	NA	NA	False	AATATA	-33	NA	22854199	22861436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546_22860639_22860885
transcript_125984.known	chr7	+	1400	5	FSM	ENSG00000228649.10	ENST00000656687.2	1408	5	8	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.72216482987438	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGATAAGCAGCTATTA	-5	True	NA	NA	False	AATAAA	-25	NA	22854253	22861580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546
transcript_125985.known	chr7	+	747	5	FSM	ENSG00000228649.10	ENST00000663057.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.66077672302228	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	-3	True	NA	NA	False	AATATA	-33	NA	22854255	22861436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546_22860639_22860885
transcript_125987.known	chr7	+	1251	5	FSM	ENSG00000228649.10	ENST00000661582.1	1251	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.66077672302228	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATTGAGTTAAATGAAA	140	False	NA	NA	False	ATTAAA	-12	NA	22854398	22861399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854965_22856521_22856557_22856972_22857017_22860546_22860639_22860885
transcript_125988.known	chr7	+	1938	4	FSM	ENSG00000228649.10	ENST00000415611.8	1938	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.54896090146283	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCATGGTTTATAACAA	NA	False	NA	NA	False	NA	NA	NA	22854125	22860274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570
transcript_125990.known	chr7	+	1238	4	FSM	ENSG00000228649.10	ENST00000422542.4	1238	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.40870359029762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAGATAAGCAGCTATT	NA	False	NA	NA	False	AATAAA	-24	NA	22854154	22861579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546
transcript_125991.nnic	chr7	+	623	4	FSM	ENSG00000228649.10	ENST00000690219.1	621	4	0	-2	0	2	multi-exon	FALSE	canonical	0	0	junction_3	8.28653526310404	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGTTAAATGAAATACAT	-3	True	NA	NA	False	ATTAAA	-17	NA	22854255	22861404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860885
transcript_125992.known	chr7	+	1176	4	FSM	ENSG00000228649.10	ENST00000657608.1	1176	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.43650214343336	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTTAAATGAAATAC	-3	True	NA	NA	False	ATTAAA	-15	NA	22854255	22861402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22858570_22858831_22860546
transcript_125994.known	chr7	+	1743	3	FSM	ENSG00000228649.10	ENST00000667557.1	1743	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGGCATTTCAGTG	NA	False	NA	14	True	AATAAA	-20	NA	22854152	22858552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972
transcript_125995.known	chr7	+	1005	6	FSM	ENSG00000228649.10	ENST00000656301.1	1005	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.2773621594641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGTTACTTGTAGCTA	NA	False	NA	NA	False	AATAAA	-15	NA	22854158	22872945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546_22860639_22872493
transcript_125996.known	chr7	-	6337	11	FSM	ENSG00000122591.13	ENST00000440481.6	6337	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	113.98284958712	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATATTTTTTCCAG	-6	True	NA	-23	True	AATAAA	-5	NA	23014130	22941268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_23013924
transcript_125999.known	chr7	-	3130	12	FSM	ENSG00000122591.13	ENST00000409923.5	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	58.6364341084848	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAAATGTCTTTCTT	3	True	NA	53	True	ACTAAA	-38	NA	23014084	22944508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_126000.known	chr7	-	616	4	FSM	ENSG00000122591.13	ENST00000409763.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	44.0983748755741	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGACTCATAGCCCAT	50	False	NA	-3	True	AATAAA	-24	NA	23014074	22978163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22978449_22983943_22984046_22991060_22991140_23013924
transcript_126001.known	chr7	-	3995	3	FSM	ENSG00000122591.13	ENST00000467005.6	3995	3	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	17.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTTTCCATGAAAAAAAAAA	-4	True	NA	NA	False	CATAAA	-7	NA	23014091	22980296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22984046_22991060_22991140_23013924
transcript_126002.known	chr7	-	3422	3	FSM	ENSG00000230658.2	ENST00000419813.2	3422	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATTAATAAGCTGAAGTA	-14	True	NA	NA	False	NA	NA	NA	23105702	23100374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23103579_23104249_23104318_23105552
transcript_126006.known	chr7	+	3165	12	FSM	ENSG00000122550.18	ENST00000521082.5	3165	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	266.58039582463	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCATTTCCTTCCTA	-28	True	NA	5	True	AATAAA	-15	NA	23105757	23175302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_126009.known	chr7	+	3231	11	FSM	ENSG00000122550.18	ENST00000409689.5	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	248.730697743564	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGATAATATTAAATATT	19	False	NA	-15	True	AATGAA	-31	NA	23106294	23175388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_12601.known	chr1	+	3407	7	FSM	ENSG00000121481.11	ENST00000367510.8	3407	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	38.3525314244923	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGCAACCTCTATTCT	16	True	NA	9	True	ATTAAA	-25	NA	185045557	185102603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185093060_185093277_185098071_185098345_185099790_185099963_185100199
transcript_12602.known	chr1	+	1677	6	FSM	ENSG00000121481.11	ENST00000367509.8	1677	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	130.341704760986	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGAGAGTGCTTTTTT	-16	True	NA	21	True	ATTAAA	-29	NA	185045525	185101057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185098071_185098345_185099790_185099963_185100199
transcript_126028.nic	chr7	+	1155	6	NIC	ENSG00000122550.18	novel	3165	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	394.191019684619	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAGCATCACTACTCTT	0	True	NA	10	True	AATAAA	-20	NA	23105733	23126049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_12603.known	chr1	-	4361	15	FSM	ENSG00000121486.12	ENST00000367506.10	4361	15	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_13	16.9598866476767	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGAGTTAAGGAAACCAG	-7	True	NA	-22	True	ATTAAA	-16	NA	185156953	185118100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185120272_185120382_185120510_185123856_185123920_185124943_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_126030.known	chr7	+	1233	6	FSM	ENSG00000122550.18	ENST00000410047.1	1233	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	407.073654269101	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATGCTAGCATCACT	22	False	NA	4	True	AATAAA	-14	NA	23106297	23126043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106795_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_126033.known	chr7	+	588	5	FSM	ENSG00000122550.18	ENST00000479700.1	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	383.346775126647	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCCAAGACCCCCAGTGA	-4	True	NA	NA	False	AATGAA	-44	NA	23106655	23125887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_126034.known	chr7	+	969	5	FSM	ENSG00000122550.18	ENST00000322275.9	969	5	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_4	219.679738483093	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGCTAGCATCACTAC	-1	True	NA	6	True	AATAAA	-16	NA	23105784	23126045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_126038.known	chr7	+	1653	8	FSM	ENSG00000136243.18	ENST00000438012.5	1653	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	58.0084441425275	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	-10	True	NA	18	True	AATAAA	-18	NA	23182023	23201006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197231_23199457_23199543_23200167
transcript_126039.known	chr7	+	1329	8	FSM	ENSG00000136243.18	ENST00000413919.1	1329	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	56.6435326927829	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTAAAGCCTCCACCTC	30	True	NA	NA	False	AAGAAA	-18	NA	23182063	23200705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197248_23199457_23199543_23200167
transcript_12604.known	chr1	+	3838	19	FSM	ENSG00000116668.13	ENST00000367500.9	3838	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	11.6052616844874	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTAGTTGGTGTAGA	-2	True	NA	105	True	AATAAA	-18	NA	185157166	185291781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185157315_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
transcript_126041.known	chr7	+	1571	7	FSM	ENSG00000136243.18	ENST00000258742.10	1571	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	16.6474889664745	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	14	True	NA	18	True	AATAAA	-18	NA	23182047	23201006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_126051.nnic	chr7	+	1758	6	NIC	ENSG00000136243.18	novel	1571	7	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	52.4572206659865	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	NA	False	NA	18	True	AATAAA	-18	NA	23181783	23201006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23196679_23196767_23199457_23199543_23200167
transcript_126052.known	chr7	+	1285	6	FSM	ENSG00000136243.18	ENST00000437140.5	1285	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	49.0118353053627	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTATGCACGAATA	32	True	NA	-21	True	NA	NA	NA	23182065	23200967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_126062.known	chr7	+	739	3	FSM	ENSG00000136243.18	ENST00000497500.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	9.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTTGATTCCCTGTATG	4	True	NA	NA	False	AATAAA	-19	NA	23182037	23187392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23185069_23185299_23187051
transcript_126063.known	chr7	+	808	2	FSM	ENSG00000136235.17	ENST00000468723.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTAACCCAGGTTAACTG	-24	True	NA	NA	False	NA	NA	NA	23273292	23274550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23273615_23274064
transcript_126064.known	chr7	+	1673	4	FSM	ENSG00000136235.17	ENST00000409458.3	1673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATTCTGTCTTTTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	23246708	23258048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23246928_23253306_23253460_23254168_23254313_23256891
transcript_126083.nnic	chr7	+	311	3	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGGACAGACGTGTTTT	2530	False	NA	NA	False	AATAAA	-20	NA	23470541	23472432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_23470663_23470991_23471079_23472329
transcript_126086.known	chr7	-	4274	15	FSM	ENSG00000136231.14	ENST00000258729.8	4274	15	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_8	12.6474971307951	2938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-7	True	NA	-4	True	AATAAA	-22	NA	23470491	23310208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_126090.known	chr7	+	2905	4	FSM	ENSG00000156928.5	ENST00000466681.2	2905	4	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_3	42.6015127535266	3785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTATATAAAATTTT	8	True	NA	NA	False	TTTAAA	-35	NA	23299338	23311729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23299609_23300838_23301018_23307867_23307950_23309355
transcript_126094.known	chr7	+	572	3	FSM	ENSG00000156928.5	ENST00000287543.4	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_2	33	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTAATCTTGAATTGTTT	8	True	NA	NA	False	NA	NA	NA	23299338	23307990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23299609_23300838_23301018_23307867
transcript_126095.known	chr7	-	2229	10	FSM	ENSG00000164548.12	ENST00000392502.8	2229	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	192.381436952609	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-14	True	NA	-8	True	AATAAA	-15	NA	23532041	23504783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23505570_23505745_23505811_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531180_23531271_23531788
transcript_126097.known	chr7	-	2142	9	FSM	ENSG00000164548.12	ENST00000538367.6	2142	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	166.92419686792	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-14	True	NA	-8	True	AATAAA	-15	NA	23532041	23504783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531788
transcript_126099.known	chr7	-	1931	9	FSM	ENSG00000164548.12	ENST00000621813.4	1931	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	175.91719465419	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-14	True	NA	-8	True	AATAAA	-15	NA	23532041	23504783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531180_23531271_23531788
transcript_1261.known	chr1	+	2178	5	FSM	ENSG00000049245.13	ENST00000054666.11	2178	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	18.4661853126194	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCACCTGTGCTCCTT	-13	True	NA	11	True	AATAAA	-17	NA	7771295	7781432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7771386_7773441_7773512_7777159_7777319_7778117_7778170_7779625
transcript_126103.known	chr7	-	1785	8	FSM	ENSG00000164548.12	ENST00000297071.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_7	52.0019622863662	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-2	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
transcript_126116.known	chr7	-	1653	5	FSM	ENSG00000164548.12	ENST00000494255.5	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	153.424248409435	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCTTTCTCAAAAAAG	-2	True	NA	NA	False	NA	NA	NA	23531981	23507156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23507536_23512893_23513083_23516362_23516529_23521706_23522433_23531788
transcript_126125.known	chr7	+	847	5	FSM	ENSG00000169193.12	ENST00000448353.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	30.7520324531567	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCAGCCAACACCACCA	10	False	NA	NA	False	NA	NA	NA	23597514	23643024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23597606_23597966_23598052_23604085_23604280_23611170_23611554_23642930
transcript_126127.known	chr7	+	2470	4	FSM	ENSG00000169193.12	ENST00000307471.8	2470	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	9.46337971105226	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTACAGTCTTTTT	-33	True	NA	60	True	AATAAA	-19	NA	23597381	23644708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23597606_23597966_23598052_23611170_23611554_23642930
transcript_126129.known	chr7	+	625	3	FSM	ENSG00000169193.12	ENST00000484553.5	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	41.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCATGTTTTTCTACT	1	True	NA	NA	False	AATAAA	-22	NA	23597415	23602220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23597606_23597966_23598052_23601870
transcript_126131.nic	chr7	+	1665	3	ISM	ENSG00000169193.12	ENST00000307471.8	2470	4	-3	32185	-3	974	5prime_fragment	FALSE	canonical	3	72	junction_2	11.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCAGGCATGGTGATAC	-36	True	NA	NA	False	AAAAAG	-11	NA	23597378	23612523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_23597606_23597966_23598052_23611170
transcript_126133.known	chr7	+	2324	3	FSM	ENSG00000169193.12	ENST00000409765.5	2324	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	22	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTACAGTCTTTT	27	True	NA	59	True	AATAAA	-18	NA	23597441	23644707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23597606_23611170_23611554_23642930
transcript_12614.nnic	chr1	+	1127	4	NNC	ENSG00000116668.13	novel	3001	19	NA	NA	99808	-286	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	31.6684210040363	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGCAGTGACTGATG	NA	False	NA	15	True	AATAAA	-15	NA	185257289	185291495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_185257463_185271322_185271390_185276603_185276669_185290673
transcript_12615.nnic	chr1	+	1320	4	NNC	ENSG00000116668.13	novel	3001	19	NA	NA	99808	-93	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	31.6684210040363	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTTTTTACTTCCA	NA	False	NA	12	True	AATAAA	-18	NA	185257289	185291688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_185257463_185271322_185271390_185276603_185276669_185290673
transcript_126159.known	chr7	+	1403	7	FSM	ENSG00000188732.11	ENST00000344962.9	1403	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	81.2679040102686	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	12	True	NA	22	True	AATAAA	-25	NA	23680198	23702650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_12616.nnic	chr1	+	1413	4	NNC	ENSG00000116668.13	novel	3001	19	NA	NA	99808	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	31.6684210040363	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTAGTTGGTGTAGA	NA	False	NA	105	True	AATAAA	-18	NA	185257289	185291781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_185257463_185271322_185271390_185276603_185276669_185290673
transcript_12617.known	chr1	+	633	5	FSM	ENSG00000116668.13	ENST00000450350.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	24.5356882927706	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCTAAAGCCGAAGGCC	-13	True	NA	NA	False	ATTAAA	-33	NA	185157481	185174626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185157627_185160832_185160926_185166571_185166653_185168339_185168399_185174371
transcript_126171.known	chr7	+	888	6	FSM	ENSG00000188732.11	ENST00000409192.7	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	43.0785329369513	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTAAAACCATCATCC	NA	False	NA	NA	False	NA	NA	NA	23680129	23702174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_126173.known	chr7	+	761	6	FSM	ENSG00000188732.11	ENST00000409653.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	89.5021787444306	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTGGAGAAATTAAAACC	-3	True	NA	NA	False	NA	NA	NA	23680183	23702167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_126176.known	chr7	+	1136	5	FSM	ENSG00000188732.11	ENST00000409994.3	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	57.8937604582739	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	-3	True	NA	22	True	AATAAA	-25	NA	23680183	23702650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_12618.known	chr1	+	3001	19	FSM	ENSG00000116668.13	ENST00000367501.7	3001	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	17.1576747395775	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTTCTGGAGTTCACAA	0	True	NA	NA	False	AATAAA	-13	NA	185157079	185291007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185157165_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
transcript_126186.known	chr7	+	555	4	FSM	ENSG00000122585.8	ENST00000242152.7	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.71404520791032	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATCCTCCTCAATGAAA	1	True	NA	5	True	AATAAA	-18	NA	24284189	24291862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24284276_24285240_24285429_24289498_24289580_24291662
transcript_126187.nic	chr7	+	558	4	ISM	ENSG00000122585.8	ENST00000407573.5	705	5	800	-54	-119	0	3prime_fragment	FALSE	canonical	0	0	junction_1	6.12825877028341	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATCCTCCTCAATGAAA	799	False	NA	5	True	AATAAA	-18	NA	24284987	24291862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_24285077_24285240_24285429_24289498_24289580_24291662
transcript_126188.known	chr7	+	565	3	FSM	ENSG00000122585.8	ENST00000405982.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTGTGTTTAAATAA	918	False	NA	-33	True	NA	NA	NA	24285106	24291824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24285429_24289498_24289580_24291662
transcript_12619.known	chr1	-	3657	16	FSM	ENSG00000116679.16	ENST00000459929.5	3657	16	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	493.903346370072	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTCTAATGTGTAG	-1	True	NA	-6	True	GATAAA	-15	NA	185317273	185297014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185306484_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_126190.known	chr7	+	8346	12	FSM	ENSG00000105926.16	ENST00000222644.10	8346	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	45.6577277048864	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTGATTTTTCAGA	-6	True	NA	5	True	AATAAA	-18	NA	24573451	24694193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_126197.nic	chr7	+	1184	8	ISM	ENSG00000105926.16	ENST00000222644.10	8346	12	-117	28133	67	0	5prime_fragment	FALSE	canonical	3	171	junction_1	52.6517243937238	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	-4	True	NA	NA	False	AAAAAG	-6	NA	24573334	24666060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_126198.known	chr7	+	1191	8	FSM	ENSG00000105926.16	ENST00000430180.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	102.663110637241	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	530	False	NA	NA	False	AAAAAG	-6	NA	24574012	24666060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_126205.known	chr7	+	982	5	FSM	ENSG00000105926.16	ENST00000432190.5	982	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	107.506685838603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTAATAAAATTTTTGG	13	True	NA	81	True	NA	NA	NA	24573267	24650712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24573594_24623662_24623785_24641715_24641869_24649611_24649765_24650484
transcript_126211.known	chr7	-	2250	10	FSM	ENSG00000105928.16	ENST00000645220.1	2250	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.9013534101431	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-22	True	NA	-3	True	ATTAAA	-18	NA	24757464	24698354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_126212.known	chr7	-	2414	10	FSM	ENSG00000105928.16	ENST00000342947.9	2414	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	21.9297419101756	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	20	True	NA	-3	True	ATTAAA	-18	NA	24757939	24698354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757706
transcript_126213.known	chr7	-	1997	9	FSM	ENSG00000105928.16	ENST00000409970.6	1997	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	21.5779835712237	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGTATTCTATTAAAGGA	6025	False	NA	-37	True	NA	NA	NA	24757475	24698388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24757395
transcript_126216.nic	chr7	-	1233	8	NIC	ENSG00000105928.16	novel	1848	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	22.2573079032942	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTTTGTTCTTTT	6028	False	NA	-1	True	TATAAA	-17	NA	24757472	24707278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_24707426_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_126223.known	chr7	-	560	5	FSM	ENSG00000105928.16	ENST00000559637.6	560	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.751968442917	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTCCTGGAGAGGAAT	NA	False	NA	NA	False	NA	NA	NA	24724784	24708251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24724685
transcript_126225.known	chr7	-	1501	4	FSM	ENSG00000105928.16	ENST00000493723.5	1501	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	9.67241208569794	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTGAAGTTTTTTAG	8166	False	NA	NA	False	NA	NA	NA	24749793	24716468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24717375_24719046_24719219_24744561_24744755_24749563
transcript_126226.known	chr7	-	6749	23	FSM	ENSG00000070882.13	ENST00000313367.7	6749	23	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_11	12.6801074114907	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTTTTGTCTTTGTTT	13	True	NA	-5	True	AATAAA	-16	NA	24980178	24796539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24849068_24849177_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
transcript_126228.known	chr7	-	799	4	FSM	ENSG00000172115.9	ENST00000409764.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1216.22366364086	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAATGTTCAACTTTTCA	23	True	NA	7	True	AGTAAA	-45	NA	25125260	25123443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25123850_25123950_25124128_25124689_25124845_25125199
transcript_126236.known	chr7	-	974	3	FSM	ENSG00000172115.9	ENST00000409409.5	974	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1289.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAAGATTCACCTGTGT	112	False	NA	NA	False	AATATA	-38	NA	25125249	25123306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25123850_25123950_25124128_25124995
transcript_12624.known	chr1	-	4113	15	FSM	ENSG00000116679.16	ENST00000367498.8	4113	15	0	0	0	0	multi-exon	TRUE	canonical	3	1367	junction_8	93.6382531286204	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAGATCACTTCTCAT	-1	True	NA	-12	True	AATAAA	-28	NA	185317243	185296387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_126240.known	chr7	-	5432	3	FSM	ENSG00000172115.9	ENST00000305786.7	5432	3	0	0	0	0	multi-exon	FALSE	canonical	3	2580	junction_1	129.5	25822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	23	True	NA	-9	True	AATAAA	-17	NA	25125260	25118655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25123850_25123950_25124128_25125199
transcript_126241.known	chr7	-	498	4	FSM	ENSG00000172115.9	ENST00000413447.1	498	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1216.22366364086	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTAATGAGTAATAATT	23	True	NA	-30	True	AAGAAA	-30	NA	25125260	25123715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25123850_25123950_25124128_25124689_25124816_25125199
transcript_126243.known	chr7	-	747	1	FSM	ENSG00000270933.1	ENST00000602992.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTCTTGTGTTCATTTG	NA	False	NA	-1	True	AATAAA	-16	NA	25949403	25948656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25948700_25949400
transcript_126264.known	chr7	+	2128	6	FSM	ENSG00000122565.19	ENST00000337620.8	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	1612.75027205082	2534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	-10	True	NA	32	True	AATAAA	-24	NA	26201161	26213356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26201562_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_126291.known	chr7	+	3740	4	FSM	ENSG00000050344.9	ENST00000056233.4	3740	4	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_2	31.3829394558395	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTAGTATGCTTCTAG	-32	True	NA	-32	True	AATAAA	-31	NA	26152197	26187137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26153069_26177942_26178123_26183700_26183785_26184532
transcript_126296.known	chr7	+	1068	4	FSM	ENSG00000122565.19	ENST00000456948.5	1068	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	2050.59476466924	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAGAAAATTTAGATTGT	18	True	NA	4	True	AATAAA	-31	NA	26201756	26208412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26202610_26202970_26203023_26206367_26206511_26208392
transcript_126298.known	chr7	+	2258	1	FSM	ENSG00000050344.9	ENST00000606261.1	2258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGAACCAAATTTACCTTA	NA	False	NA	34	True	AATAAA	-45	NA	26184059	26186317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26184100_26186300
transcript_126299.known	chr7	+	2061	6	FSM	ENSG00000122565.19	ENST00000396386.7	2061	6	0	0	0	0	multi-exon	FALSE	canonical	3	3918	junction_4	208.415546445077	8615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTAACTGTCTTCT	6	True	NA	32	True	ATTAAA	-19	NA	26201744	26213607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_126300.known	chr7	-	3628	11	FSM	ENSG00000122566.22	ENST00000618183.5	3628	11	0	0	0	0	multi-exon	FALSE	canonical	3	5879	junction_10	1275.85101402946	32824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	1	True	NA	-16	True	AATAAA	-23	NA	26200746	26189926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_126301.known	chr7	-	1724	13	FSM	ENSG00000122566.22	ENST00000360787.8	1724	13	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	3794.24229004363	1750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	1	True	NA	-7	True	AATAAA	-18	NA	26200746	26190124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_126302.known	chr7	+	1717	6	FSM	ENSG00000122565.19	ENST00000409747.5	1717	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	1638.31530542811	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26	True	NA	32	True	AATAAA	-24	NA	26201764	26213356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208465_26208556_26211661_26211757_26212081
transcript_126303.known	chr7	+	949	3	FSM	ENSG00000122565.19	ENST00000462165.2	949	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2142	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTTCTCAAACTTTTTT	4171	False	NA	7	True	AATAAA	-16	NA	26206367	26210582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26206511_26208392_26208556_26209939
transcript_126304.known	chr7	+	922	4	FSM	ENSG00000122565.19	ENST00000497498.1	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	3918	junction_3	254.820634085145	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGACAGCAGTGGAGAAT	266	False	NA	NA	False	NA	NA	NA	26202462	26211717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26203023_26206367_26206511_26208392_26208556_26211661
transcript_126305.known	chr7	+	2665	7	FSM	ENSG00000086300.16	ENST00000338523.9	2665	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	13.3010024684858	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTTTTATTTTTT	-12	True	NA	60	True	AATATA	-19	NA	26291861	26374383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_126308.known	chr7	-	508	2	FSM	ENSG00000225792.2	ENST00000451264.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAGCTAGATAATTTA	269	False	NA	NA	False	NA	NA	NA	26376701	26372331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26372569_26376430
transcript_126309.known	chr7	+	1089	6	FSM	ENSG00000214870.10	ENST00000658860.1	1089	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.19089023002066	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTCCTGAAAACATAAATA	-2	True	NA	-12	True	AATAAA	-2	NA	26398946	26496349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26399022_26412184_26412240_26493794_26494264_26495018_26495200_26495808_26495882_26496113
transcript_126310.known	chr7	+	1142	5	FSM	ENSG00000214870.10	ENST00000664882.1	1142	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.46410161513775	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTAATGGTTACATCAAA	-12	True	NA	6	True	AATAAA	-20	NA	26398905	26496367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26399022_26403395_26403518_26493794_26494264_26495018_26495200_26496113
transcript_126314.known	chr7	+	2945	3	FSM	ENSG00000214870.10	ENST00000653576.1	2945	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTAAATGCTGCTTTTT	15	True	NA	-70	True	TTTAAA	-31	NA	26398628	26496291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26399022_26412184_26412240_26493794
transcript_126315.known	chr7	+	1274	3	FSM	ENSG00000214870.10	ENST00000654666.1	1274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCTTCAAGGGGATT	-12	True	NA	NA	False	AAAAAG	-6	NA	26398852	26494777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26399022_26403395_26403518_26493794
transcript_126316.known	chr7	+	2063	2	FSM	ENSG00000214870.10	ENST00000653790.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCCTGTAAATCCCTGC	12	True	NA	NA	False	NA	NA	NA	26398929	26401216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26399022_26399245
transcript_126317.known	chr7	-	3839	13	FSM	ENSG00000005020.13	ENST00000345317.7	3839	13	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_9	3.69966214673719	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	-3	True	NA	-6	True	AATAAA	-18	NA	26864590	26667067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029_26844138_26854136_26854163_26854784_26854891_26864362
transcript_12632.known	chr1	+	1016	3	FSM	ENSG00000261729.2	ENST00000665571.1	1016	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTTGCATATGAGTCA	NA	False	NA	NA	False	AATAAA	-13	NA	185647882	185657167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185648000_185655002_185655211_185656476
transcript_126320.known	chr7	-	2016	3	FSM	ENSG00000105991.10	ENST00000355633.5	2016	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGGTATGCTTAAGCA	9	True	NA	NA	False	AATAAA	-14	NA	27095996	27093312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_27094796_27095260_27095356_27095558
transcript_126321.known	chr7	+	1201	2	FSM	ENSG00000240990.10	ENST00000520395.2	1201	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGTTTATGTGGCTCTC	105	False	NA	NA	False	AGTAAA	-15	NA	27185533	27187153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27186264_27186682
transcript_126322.known	chr7	-	757	2	FSM	ENSG00000253308.2	ENST00000523608.2	757	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGTCTGGCTGTCGTGA	1443	False	NA	NA	False	AAAAAG	-34	NA	27241228	27239242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_27239976_27241204
transcript_126328.known	chr7	-	1878	8	FSM	ENSG00000106049.9	ENST00000265395.7	1878	8	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	28.8231766154267	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCTTGGTGTTTTTGT	41	True	NA	-7	True	AATAAA	-16	NA	27662883	27525441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
transcript_126333.nnic	chr7	+	592	3	NNC	ENSG00000286478.1	novel	489	2	NA	NA	-14476	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATTGTGTCTGCATAC	2	True	NA	5	True	ATTAAA	-18	NA	27602997	27627492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_27603171_27616646_27616796_27627222
transcript_126334.nnic	chr7	+	420	2	NNC	ENSG00000286478.1	novel	489	2	NA	NA	-14453	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATTGTGTCTGCATAC	25	False	NA	5	True	ATTAAA	-18	NA	27603020	27627492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_27603171_27627222
transcript_126339.known	chr7	+	2478	17	FSM	ENSG00000106052.14	ENST00000265393.10	2478	17	0	0	0	0	multi-exon	TRUE	canonical	3	1030	junction_8	131.749866579629	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	721	False	NA	71	True	AGTAAA	-15	NA	27740094	27828881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_126344.known	chr7	+	3423	17	FSM	ENSG00000106052.14	ENST00000396319.7	3423	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_14	297.887746265267	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTGTTGTCAAATTTA	6	True	NA	27	True	ATTAAA	-31	NA	27740161	27829767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816521_27816889_27817039_27827737_27827821_27828627
transcript_126350.known	chr7	+	2221	16	FSM	ENSG00000106052.14	ENST00000416801.6	2221	16	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	320.771334269272	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	-9	True	NA	54	True	AATATA	-11	NA	27740146	27828864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_126370.known	chr7	+	591	3	FSM	ENSG00000106052.14	ENST00000490455.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	3	1260	junction_1	110.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTGAAGAGTGGGTTT	13	True	NA	NA	False	TTTAAA	-23	NA	27740168	27758351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27740270_27748517_27748687_27758030
transcript_126372.known	chr7	-	1190	2	FSM	ENSG00000229893.2	ENST00000441955.2	1190	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAAGCTTGAGTTGTGGGC	347	False	NA	NA	False	ATTAAA	-12	NA	27740395	27733063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_27733874_27740015
transcript_126374.known	chr7	-	3173	5	FSM	ENSG00000153814.13	ENST00000283928.10	3173	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	12.852528934027	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGGCTCTTTATTTT	-17	True	NA	NA	False	AATAAA	-19	NA	28180795	27830576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_27832977_27840697_27840868_27895219_27895417_27991908_27991982_28180462
transcript_126377.nnic	chr7	-	576	3	NNC	ENSG00000153814.13	novel	2919	4	NA	NA	41	-70112	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	63	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCACCAGTTTTACT	24	True	NA	NA	False	AATAAA	-22	NA	28180754	27965330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_27965542_27991908_27991982_28180462
transcript_126379.known	chr7	+	2001	7	FSM	ENSG00000146592.17	ENST00000396298.6	2001	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.5723301886761	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAAACCTC	1	True	NA	NA	False	AAGAAA	-17	NA	28685980	28820000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_28686198_28718752_28718880_28724221_28724333_28804198_28804523_28809186_28809415_28818070_28818180_28819115
transcript_12638.known	chr1	-	9636	51	FSM	ENSG00000047410.14	ENST00000367478.9	9636	51	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_45	88.0265778046608	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTGTAATTCTTTAA	8	True	NA	NA	False	AATAAA	-7	NA	186375253	186311651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_126384.known	chr7	-	1739	13	FSM	ENSG00000106066.15	ENST00000396276.7	1739	13	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_12	120.402680848707	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTTTGTTTTTGGGG	-23	True	NA	38	True	AATAAA	-18	NA	29146497	28995630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146340
transcript_12639.known	chr1	-	515	3	FSM	ENSG00000047410.14	ENST00000451586.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	157	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAAGCTTGCGGCTTGA	23	True	NA	NA	False	AATGAA	-10	NA	186375693	186373392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_186373464_186374877_186375187_186375558
transcript_126392.known	chr7	-	2087	13	FSM	ENSG00000106066.15	ENST00000265394.10	2087	13	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_12	45.5418000912959	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATGAGTCAATTCTT	-63	True	NA	NA	False	AATAAA	-17	NA	29146537	28995234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_126397.known	chr7	+	425	3	FSM	ENSG00000106069.24	ENST00000461824.1	425	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	8.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGGGGTACCCTGTA	-3	True	NA	NA	False	ATTAAA	-18	NA	29146588	29148657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_29146746_29146848_29146961_29148501
transcript_126400.known	chr7	+	570	2	FSM	ENSG00000106069.24	ENST00000470261.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATCTTCTGCACTGTCC	0	True	NA	NA	False	NA	NA	NA	29146631	29147304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_29146746_29146848
transcript_126404.nnic	chr7	-	1195	6	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-26	4039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.44748483277715	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	NA	False	NA	-2	True	AATAAA	-20	NA	29563717	29510184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510412_29510502_29510644_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_126413.nnic	chr7	-	1286	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-26	4039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.87059749960509	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	NA	False	NA	-2	True	AATAAA	-20	NA	29563717	29510184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510644_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_126416.nnic	chr7	-	1213	4	NNC	ENSG00000223813.4	novel	1397	2	NA	NA	-17	4039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.39934634239519	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	NA	False	NA	-2	True	AATAAA	-20	NA	29563708	29510184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510644_29512811_29512984_29515056_29515318_29563387
transcript_126417.known	chr7	-	1434	3	FSM	ENSG00000223813.4	ENST00000447171.2	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGACAGTATCAAGAA	-5	True	NA	NA	False	AATAAA	-16	NA	29563663	29514223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_29515318_29561858_29561923_29563387
transcript_126421.known	chr7	+	1652	2	FSM	ENSG00000176532.4	ENST00000319694.3	1652	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAGGTGACTTTTGTA	-3	True	NA	6	True	ATTAAA	-16	NA	29563834	29567293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_29564378_29566184
transcript_126422.nnic	chr7	+	703	2	ISM	ENSG00000227855.4	ENST00000689485.1	4841	3	15	48671	15	-2	5prime_fragment	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTTTCTTTGTCAA	NA	False	NA	NA	False	AATAAA	-20	NA	29685031	29687890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_29685123_29687278
transcript_126424.known	chr7	+	4184	9	FSM	ENSG00000122574.12	ENST00000242140.10	4225	9	46	-5	46	5	multi-exon	FALSE	canonical	0	0	junction_4	9.84171605971235	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCGTTTCCTTGTTAAA	29	True	NA	34	True	AATAAA	-22	NA	29806553	29917066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29883849_29884594_29888067_29888218_29889305_29889408_29904285_29904363_29914492
transcript_126426.known	chr7	+	3491	8	FSM	ENSG00000122574.12	ENST00000409123.5	3491	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.4569086624829	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGGAAGAAAAAAAACAAA	-39	True	NA	NA	False	AAGAAA	-21	NA	29806485	29906175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29883849_29884594_29888067_29888218_29889305_29889408_29904285
transcript_126429.known	chr7	+	2140	14	FSM	ENSG00000106086.20	ENST00000622102.4	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_13	54.3438537267079	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTGGCCTGT	-42	True	NA	19	True	AATAAA	-16	NA	30028360	30118345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30117969
transcript_126430.known	chr7	+	1907	14	FSM	ENSG00000106086.20	ENST00000396257.6	1907	14	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_13	57.9068830156806	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGTCAAGATTTTTATT	22	True	NA	NA	False	NA	NA	NA	30028424	30129472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30129265
transcript_126435.known	chr7	-	5254	8	FSM	ENSG00000136193.17	ENST00000242059.10	5254	8	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	25.4878922836162	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGGAGTGGCCTCT	3	True	NA	-6	True	AATAAA	-16	NA	29989801	29920108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
transcript_126436.known	chr7	-	703	5	FSM	ENSG00000106080.11	ENST00000412494.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	49.7845357515765	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTTTTATACAATGT	247	False	NA	-15	True	AATATA	-41	NA	30026419	30014670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30014894_30018995_30019124_30020212_30020305_30022664_30022817_30026311
transcript_126439.nnic	chr7	-	1256	4	NNC	ENSG00000106080.11	novel	751	2	NA	NA	-9	4664	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	44.131117769161	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTCTGTCATTCTGT	-45	True	NA	NA	False	NA	NA	NA	30026711	30005922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_30006499_30018995_30019124_30022664_30022817_30026311
transcript_126440.nnic	chr7	-	1062	4	NNC	ENSG00000106080.11	novel	751	2	NA	NA	-9	4470	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	44.131117769161	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTATCCTAAATATATATG	-45	True	NA	NA	False	NA	NA	NA	30026711	30006116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_30006499_30018995_30019124_30022664_30022817_30026311
transcript_126442.known	chr7	-	4978	4	FSM	ENSG00000106080.11	ENST00000222803.10	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	8.49836585598798	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTGTGAAAAATTCT	-36	True	NA	-3	True	AATAAA	-18	NA	30026702	30010586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30014894_30018995_30019124_30022664_30022817_30026311
transcript_126452.known	chr7	-	751	2	FSM	ENSG00000106080.11	ENST00000479939.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACATAAAATTTTTCA	30	True	NA	NA	False	NA	NA	NA	30026636	30022390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30022817_30026311
transcript_126459.known	chr7	+	5761	3	FSM	ENSG00000180354.16	ENST00000324453.13	5761	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGCCTCTTTT	-13	True	NA	22	True	ATTAAA	-16	NA	30134985	30162762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30135299_30146176_30146300_30157437
transcript_126461.known	chr7	+	843	2	FSM	ENSG00000180354.16	ENST00000409688.1	843	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACTTTTTAAGTGTC	-11	True	NA	NA	False	AAGAAA	-16	NA	30134987	30157969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30135299_30157437
transcript_126462.known	chr7	+	614	2	FSM	ENSG00000251660.1	ENST00000511893.1	614	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTAGACTTTGACCAAA	NA	False	NA	-36	True	CATAAA	-19	NA	30157530	30159534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30157596_30158985
transcript_126466.known	chr7	+	1234	1	FSM	ENSG00000235859.5	ENST00000496846.1	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGCACATCCTTTGTGTG	5	True	NA	NA	False	AAGAAA	-11	NA	30371507	30372741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30371500_30372700
transcript_126470.known	chr7	-	757	5	FSM	ENSG00000106100.11	ENST00000419799.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.69258240356725	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCACCCAGCCTGACA	-13	True	NA	NA	False	NA	NA	NA	30478742	30456742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30457043_30459151_30459241_30459900_30460042_30463608_30463699_30478605
transcript_126473.known	chr7	+	2437	17	FSM	ENSG00000106105.15	ENST00000389266.8	2437	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	353.476876674769	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	-12	True	NA	19	True	ATTAAA	-22	NA	30594877	30634033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_126482.known	chr7	-	431	5	FSM	ENSG00000196295.13	ENST00000583664.5	431	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8.15475321515004	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCTGACTTCCCACT	-3	True	NA	NA	False	NA	NA	NA	30594760	30578067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30578092_30579005_30579129_30579230_30579315_30585329_30585480_30594710
transcript_126483.known	chr7	-	890	4	FSM	ENSG00000196295.13	ENST00000580440.7	891	4	0	1	0	-1	multi-exon	FALSE	canonical	3	15	junction_2	3.85861230093008	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-17	True	NA	NA	False	AATAAA	-39	NA	30594774	30577499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30578092_30579230_30579315_30585329_30585480_30594710
transcript_126488.known	chr7	-	2803	3	FSM	ENSG00000196295.13	ENST00000581794.6	2803	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	-20	True	NA	NA	False	NA	NA	NA	30594777	30566403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30568990_30585329_30585480_30594710
transcript_126489.known	chr7	-	836	2	FSM	ENSG00000006625.18	ENST00000409144.5	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	15	True	NA	-17	True	AATAAA	-5	NA	30504801	30496632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30504568
transcript_12649.known	chr1	+	3820	14	FSM	ENSG00000157181.16	ENST00000287859.11	3820	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	42.6571580874145	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	-30	True	NA	NA	False	AATAAA	-20	NA	186375837	186421375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_126490.known	chr7	-	1012	3	FSM	ENSG00000006625.18	ENST00000440082.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	312.5	3424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-13	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30498802_30498939_30504568
transcript_126491.known	chr7	-	1158	4	FSM	ENSG00000006625.18	ENST00000275428.9	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_3	126.388290596875	5159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-13	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30498802_30498939_30500535_30500682_30504568
transcript_126492.known	chr7	-	1032	3	FSM	ENSG00000006625.18	ENST00000005374.10	1032	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	333.5	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGTCTCTACTAAA	2620	False	30504859	-7	True	AATAAA	-15	NA	30504841	30496622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30500535_30500682_30504568
transcript_126493.known	chr7	+	2276	17	FSM	ENSG00000106105.15	ENST00000676140.1	2276	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	474.185288152216	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	-12	True	NA	NA	False	AAAAAG	-32	NA	30594877	30633874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615897_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_126494.known	chr7	+	2378	16	FSM	ENSG00000106105.15	ENST00000676403.1	2378	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	486.309841790419	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	-47	True	NA	19	True	ATTAAA	-22	NA	30594842	30634033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30632246_30632438_30633734
transcript_126495.known	chr7	-	767	4	FSM	ENSG00000006625.18	ENST00000409390.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	304.437185639337	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCATTTTCAGCAGTGC	17	True	NA	NA	False	NA	NA	NA	30504799	30497001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30497740_30497897_30500535_30500682_30504568
transcript_126496.known	chr7	-	954	4	FSM	ENSG00000006625.18	ENST00000409436.2	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	322.759972735158	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAAAGTTGATATTC	0	True	NA	NA	False	ATTAAA	-16	NA	30504816	30497472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497897_30498802_30498939_30500535_30500682_30504568
transcript_126497.known	chr7	+	1252	7	FSM	ENSG00000106105.15	ENST00000454308.6	1252	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	528.79884854472	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCACTGTTAGATT	-26	True	NA	NA	False	AATAAA	-29	NA	30594863	30605448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30604989
transcript_126502.nnic	chr7	+	1486	3	Antisense	novelGene_ENSG00000106113.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCCTGAAGTCATAATT	9979	False	NA	NA	False	AATAAA	-21	NA	30642359	30686771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_30642837_30654317_30654428_30685872
transcript_126505.known	chr7	+	2733	18	FSM	ENSG00000106125.14	ENST00000265299.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_16	9.34276175613153	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGGGCCCAGGCTCAT	1	True	NA	13	True	TATAAA	-16	NA	30771416	30892387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30850453_30850556_30852215_30852280_30853393_30853460_30859256_30859325_30872242_30872307_30875494_30875657_30882180_30882362_30882920_30882994_30891956
transcript_126507.nnic	chr7	+	1785	10	NNC	ENSG00000106125.14	novel	2733	18	NA	NA	-20	-46582	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	11.0754984838908	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGTGTTTTTTCTGCAG	-19	True	NA	NA	False	AATAAA	-14	NA	30771396	30845804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30845561
transcript_126508.nic	chr7	+	1446	8	ISM	ENSG00000106125.14	ENST00000265299.6	2733	18	-20	53078	-20	52665	5prime_fragment	FALSE	canonical	3	21	junction_5	7.73542078324622	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAAGGCAGGTTGCTCCT	-19	True	NA	NA	False	ATTAAA	-16	NA	30771396	30839309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199
transcript_126509.nic	chr7	+	1412	4	ISM	ENSG00000106125.14	ENST00000265299.6	2733	18	-20	105743	-20	0	5prime_fragment	FALSE	canonical	3	35	junction_3	2.05480466765633	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAAAAACAGCATCTT	-19	True	NA	NA	False	AAAAAG	-15	NA	30771396	30786644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748
transcript_126513.nic	chr7	+	668	2	ISM	ENSG00000106128.19	ENST00000461424.5	1054	9	11855	0	-257	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-21	True	NA	NA	False	AATAAA	-18	NA	30983823	30985216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_30984360_30985084
transcript_126514.known	chr7	+	1768	5	FSM	ENSG00000106341.11	ENST00000342032.8	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.56637297521078	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCCTCGTGCGTT	-6	True	NA	9	True	AATAAA	-15	NA	31687214	31708455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_31687307_31692405_31692524_31695468_31695622_31696964_31697118_31707203
transcript_126515.known	chr7	+	569	4	FSM	ENSG00000106341.11	ENST00000409146.3	569	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	18.3847763108502	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAGATGTATGCCAT	-6	True	NA	NA	False	NA	NA	NA	31687214	31707409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_31687307_31692405_31692524_31696964_31697118_31707203
transcript_126517.nnic	chr7	+	1505	3	NIC	ENSG00000106341.11	novel	1768	5	NA	NA	-41	2	intron_retention	FALSE	canonical	0	0	junction_2	22.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTCCTCGTGCGTTTC	101	False	NA	11	True	AATAAA	-17	NA	31687173	31708457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_31687307_31692405_31692524_31707203
transcript_126521.nnic	chr7	-	739	3	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCTTGAGAGACTTG	NA	False	NA	NA	False	AATAAA	-18	NA	32465040	32455712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_-_32456030_32464524_32464789_32464882
transcript_126522.nnic	chr7	-	1505	3	Genic_Genomic	ENSG00000226468.2	novel	796	1	NA	NA	-7282	66	multi-exon	FALSE	canonical	1	1	junction_1	2	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAGATTTATTGAACTT	NA	False	NA	NA	False	AATAAA	-31	NA	32465040	32456896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_-_32457980_32464524_32464789_32464882
transcript_126525.known	chr7	-	1295	5	FSM	ENSG00000106355.10	ENST00000223084.7	1295	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	1021.4765048693	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	4402	False	NA	-6	True	AATAAA	-16	NA	32490863	32487034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490024
transcript_126526.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000410044.5	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1031.8644533077	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	4904	False	NA	-6	True	AATAAA	-16	NA	32490361	32487034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490130
transcript_126527.known	chr7	-	740	5	FSM	ENSG00000106355.10	ENST00000409909.7	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	1010.22299518473	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTTTCTTCTGATT	-18	True	NA	-5	True	ATTAAA	-18	NA	32495283	32486804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32495229
transcript_126530.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000409952.3	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1031.8644533077	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAAAATAAAGGTGTTT	16	True	NA	-34	True	AAAAAG	-23	NA	32495249	32487062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32494990
transcript_126532.known	chr7	-	2214	5	FSM	ENSG00000106355.10	ENST00000450169.7	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_4	40.0530897684561	4269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATGTTTTCTGCGTTTG	11	True	NA	-5	True	NA	NA	NA	32490380	32485337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
transcript_126533.known	chr7	-	504	4	FSM	ENSG00000106355.10	ENST00000409987.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1105.63194599288	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	11	True	NA	-6	True	AATAAA	-16	NA	32490380	32487034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32489233_32489345_32490319
transcript_126534.known	chr7	-	1736	3	FSM	ENSG00000106355.10	ENST00000480956.1	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_2	48	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGATGAAAATAAAGGTGT	20	True	NA	-36	True	AAAAAG	-21	NA	32490371	32487064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32488653_32489248_32489345_32490319
transcript_126537.known	chr7	+	6987	16	FSM	ENSG00000105778.20	ENST00000318709.9	6987	16	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_11	8.1948493308636	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCCTAGAAGTACCCTG	-37	True	NA	24	True	AATAAA	-36	NA	32495488	32588726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_126548.known	chr7	+	6372	13	FSM	ENSG00000105778.20	ENST00000446718.1	6372	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	32.6772941896289	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGGACTTGACCTGT	NA	False	NA	9	True	AATAAA	-21	NA	32543254	32588711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32580801_32580891_32583791
transcript_126550.known	chr7	+	472	1	FSM	ENSG00000273014.1	ENST00000609151.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTCAAATGTATTA	NA	False	NA	18	True	ATTAAA	-30	NA	32758881	32759353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_32758900_32759400
transcript_126554.known	chr7	-	3608	4	FSM	ENSG00000170852.12	ENST00000304056.9	3608	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	11.5854314646552	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATTTTTCTTTTGTTA	-5	True	NA	-24	True	AATAAA	-15	NA	32891760	32868171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32870881_32874991_32875158_32879434_32879943_32891535
transcript_126567.known	chr7	-	1742	10	FSM	ENSG00000122643.23	ENST00000456458.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_9	103.163420639414	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-3	True	NA	-16	True	AATAAA	-24	NA	33062796	33014129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
transcript_126569.known	chr7	-	1667	9	FSM	ENSG00000122643.23	ENST00000610140.7	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_8	37.6777039507452	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	29	False	33062793	-16	True	AATAAA	-24	NA	33062776	33014129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33062567
transcript_12657.known	chr1	+	1900	13	FSM	ENSG00000157181.16	ENST00000419367.8	1900	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	55.7859873883119	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTAGCTGG	-30	True	NA	NA	False	NA	NA	NA	186375837	186419551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_126582.nic	chr7	-	1804	5	NIC	ENSG00000122643.23	novel	1742	10	NA	NA	-29	1047	intron_retention	FALSE	canonical	3	89	junction_4	114.937754893681	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGATCATGACAAACTTA	NA	False	NA	NA	False	NA	NA	NA	33062825	33020777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
transcript_126585.known	chr7	-	1135	6	FSM	ENSG00000164610.10	ENST00000297157.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	22.3284571791246	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-4	True	NA	-2	True	AATAAA	-23	NA	33109404	33094796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33099437_33100530_33100562_33109220
transcript_126587.known	chr7	+	3996	23	FSM	ENSG00000122507.21	ENST00000242067.11	3996	23	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_8	25.8982832322949	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGCCTCTCAGTACAA	12	True	NA	NA	False	AATAAA	-20	NA	33129563	33606069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33336440_33336623_33340896_33340974_33344580_33344635_33349067_33349171_33351218_33351324_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_126589.nic	chr7	+	2094	10	NIC	ENSG00000122507.21	novel	1252	9	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_9	26.511120424698	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTTGATTGGTATC	-7	True	NA	NA	False	ATTAAA	-15	NA	33129286	33314571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_33130042_33146241_33146365_33152700_33152852_33155637_33155703_33177477_33177592_33257235_33257411_33264289_33264375_33273011_33273196_33273826_33273957_33314259
transcript_12659.nic	chr1	+	2459	12	ISM	ENSG00000157181.16	ENST00000287859.11	3820	14	-440	14430	-440	-4948	5prime_fragment	FALSE	non_canonical	0	0	junction_11	43.2694803976694	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTTATTCTTTGCA	104	False	NA	9	True	AATAAA	-21	NA	186375397	186406945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082
transcript_126591.nnic	chr7	+	1709	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	25.8662275640469	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	7280	False	NA	NA	False	AATAAA	-20	NA	33351873	33605632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_126593.nic	chr7	+	1682	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	38.7040049607273	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	7292	False	NA	NA	False	AATAAA	-20	NA	33351885	33605632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_126597.known	chr7	+	549	5	FSM	ENSG00000122507.21	ENST00000627264.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	51.9879793798528	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGAAGAACTCTTA	7333	False	NA	NA	False	GATAAA	-6	NA	33351926	33388007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991
transcript_126602.nnic	chr7	+	489	3	NNC	ENSG00000122507.21	novel	2832	23	NA	NA	198004	94	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_2	2	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAGTGGCTATACCTTT	NA	False	NA	16	True	AATAAA	-17	NA	33736186	33877274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_33736342_33860594_33860706_33877051
transcript_126603.nnic	chr7	-	1215	3	NNC	ENSG00000236494.3	novel	1266	3	NA	NA	-1455	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGAATGTAGTTCCTCAA	NA	False	NA	-27	True	AATAAA	-2	NA	33804645	33793775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_33794548_33802921_33802968_33804248
transcript_126607.known	chr7	-	1589	2	FSM	ENSG00000236494.3	ENST00000420185.1	1589	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAGGCACCTAACAATG	42	False	NA	NA	False	AATAAA	-15	NA	33803130	33793167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_33794548_33802921
transcript_126609.known	chr7	+	5287	15	FSM	ENSG00000164619.10	ENST00000649409.2	5287	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	9.21843760280096	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGTTTGTGGATTTGTT	4	True	NA	NA	False	AATAAA	-33	NA	33905538	34156427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_33905747_33906817_33906904_33937288_33937389_33966478_33966562_33970328_33970420_33974701_33974785_34046305_34046406_34051860_34051971_34055162_34055304_34058058_34058164_34062001_34062048_34078856_34079187_34085755_34086093_34143229_34143361_34153091
transcript_126611.known	chr7	+	2930	14	FSM	ENSG00000164619.10	ENST00000648848.1	2930	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	18.9011755684619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTGAAAACATCAACAAAAA	10	True	NA	-63	True	NA	NA	NA	33905544	34154406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_33905747_33906817_33906904_33937288_33937389_33966478_33966562_33970328_33970420_33974701_33974785_34046305_34046406_34051860_34051971_34055162_34055304_34058058_34058164_34062001_34062048_34085755_34086093_34143229_34143361_34153091
transcript_126612.nic	chr7	+	1876	12	ISM	ENSG00000164619.10	ENST00000297161.6	5031	16	548	76373	-44	24290	internal_fragment	TRUE	canonical	3	54	junction_11	8.30612638581849	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACCCCTCTCTCAAGTT	194	False	NA	11	True	NA	NA	NA	33905458	34079499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_33905747_33906817_33906904_33937288_33937389_33966478_33966562_33970328_33970420_33974701_33974785_34046305_34046406_34051860_34051971_34055162_34055304_34058058_34058164_34062001_34062048_34078856
transcript_126620.known	chr7	+	602	3	FSM	ENSG00000164619.10	ENST00000496609.1	602	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTGGGGCTGGAAGGA	3	True	NA	NA	False	NA	NA	NA	33905502	33937560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_33905747_33906817_33906904_33937288
transcript_126621.nic	chr7	+	3164	2	ISM	ENSG00000164619.10	ENST00000448280.5	844	4	548	12335	-44	-12335	internal_fragment	FALSE	canonical	3	72	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAGCTAACG	194	False	NA	NA	False	NA	NA	NA	33905458	33909693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_33905747_33906817
transcript_126625.nnic	chr7	+	1220	2	NNC	ENSG00000236212.2	novel	1600	2	NA	NA	-34374	-455	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTTGAGATTGCAACA	NA	False	NA	NA	False	AATAAA	-23	NA	34175090	34298557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_34175332_34297578
transcript_126632.nnic	chr7	-	2258	3	NNC	ENSG00000189212.13	novel	2562	5	NA	NA	14113	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_2	2	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTGTAAATTATTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	35093621	35079988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_35081741_35091846_35091947_35093215
transcript_126634.nnic	chr7	-	802	3	NNC	ENSG00000189212.13	novel	2562	5	NA	NA	14282	-15	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTTTCATCCAACTAGG	NA	False	NA	NA	False	AATAAA	-16	NA	35093452	35081275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_35081741_35091846_35091947_35093215
transcript_126637.known	chr7	+	860	3	FSM	ENSG00000287249.1	ENST00000659178.1	860	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGCTTCTGTGTTGTTGT	57	False	NA	NA	False	AAGAAA	-25	NA	35036835	35125012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35036922_35102465_35102558_35124330
transcript_126642.known	chr7	-	3057	8	FSM	ENSG00000122557.11	ENST00000396081.5	3057	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	11.8425038720358	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTATGGGATATTTGT	8	True	NA	-4	True	AATAAA	-18	NA	35695135	35632658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_35633852_35634311_35634430_35635134_35635459_35638349_35638473_35667433_35667589_35670214_35670329_35673200_35673279_35694183
transcript_126643.known	chr7	+	4200	1	FSM	ENSG00000271122.1	ENST00000605778.1	4200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTGTAAATAATGGTT	-25	True	NA	NA	False	AATAAA	-18	NA	35695213	35699413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35695200_35699400
transcript_126649.known	chr7	+	1464	14	FSM	ENSG00000122545.21	ENST00000635175.1	1464	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	407.972066569014	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCCATAATGATGGAT	-5	True	NA	NA	False	NA	NA	NA	35801218	35904385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35801271_35831424_35831497_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_126651.known	chr7	+	1584	12	FSM	ENSG00000122545.21	ENST00000435235.6	1584	12	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	377.109778610907	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAGTACCTTTCCTACA	NA	False	NA	NA	False	NA	NA	NA	35801038	35904500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35801271_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_126655.known	chr7	+	583	6	FSM	ENSG00000122545.21	ENST00000634600.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	1	11	junction_1	552.38950026227	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGGAATGCCAACAGTT	-8	True	NA	NA	False	AAAAAG	-42	NA	35801215	35879910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35801271_35832803_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822
transcript_126656.known	chr7	+	733	7	FSM	ENSG00000122545.21	ENST00000475109.5	733	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	622.723230835515	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCAGGATGTGTTAACC	-5	True	NA	NA	False	TTTAAA	-7	NA	35801218	35879940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35801271_35832797_35832894_35863551_35863659_35872665_35872767_35873640_35873776_35879595_35879720_35879822
transcript_126660.known	chr7	+	4731	24	FSM	ENSG00000011426.11	ENST00000265748.7	4731	24	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_9	44.6629469244621	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	-3	True	NA	34	True	AATAAA	-23	NA	36389861	36453791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_126664.known	chr7	+	4661	23	FSM	ENSG00000011426.11	ENST00000396068.6	4661	23	0	0	0	0	multi-exon	TRUE	canonical	3	117	junction_8	76.0655980493914	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	-12	True	NA	34	True	AATAAA	-23	NA	36389820	36453791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_126668.nic	chr7	+	857	3	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	-51	54285	-51	3085	5prime_fragment	FALSE	canonical	3	452	junction_2	12.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGAGTATCCTTTGCT	NA	False	NA	NA	False	AATAAA	-18	NA	36389769	36399506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_36390045_36396265_36396420_36399078
transcript_12667.known	chr1	+	2879	18	FSM	ENSG00000116711.10	ENST00000367466.4	2879	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.1104244862123	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAGATAACTGAGTTTT	-30	True	NA	NA	False	AATAAA	-20	NA	186828948	186988981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_186829036_186854285_186854388_186870434_186870517_186893010_186893160_186894097_186894212_186906964_186907003_186911247_186911390_186932762_186932900_186939007_186939231_186939979_186940095_186946636_186946775_186946868_186946962_186950656_186950729_186956101_186956345_186965408_186965594_186977592_186977789_186979314_186979473_186988376
transcript_126672.nic	chr7	+	1632	2	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	-51	56169	-51	1201	5prime_fragment	FALSE	canonical	3	477	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAGCCAAGTGTAG	NA	False	NA	NA	False	AATAAA	-16	NA	36389769	36397622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_36390045_36396265
transcript_126674.known	chr7	-	5092	22	FSM	ENSG00000155849.16	ENST00000310758.9	5092	22	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_21	22.4306439240623	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGATGTTTAAATTCC	15	True	NA	NA	False	AATAAA	-20	NA	37448864	36852905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_126675.known	chr7	-	2621	22	FSM	ENSG00000155849.16	ENST00000448602.5	2621	22	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_21	30.4054237911325	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGGGCCCAGACATG	206	False	37449242	NA	False	NA	NA	NA	37449223	36855550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_126680.nic	chr7	-	1778	14	ISM	ENSG00000155849.16	ENST00000448602.5	2621	22	-26	277455	-26	0	5prime_fragment	FALSE	canonical	3	92	junction_13	32.511809415646	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	-7	True	NA	NA	False	AGTAAA	-3	NA	37449249	37133005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_126685.known	chr7	-	2876	5	FSM	ENSG00000155849.16	ENST00000463390.1	2876	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	29.5550334122633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23	True	NA	NA	False	NA	NA	NA	37448856	37269453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_126692.known	chr7	+	1365	10	FSM	ENSG00000010270.14	ENST00000396013.5	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	141.303455961511	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGTAATAAAATCTG	-9	True	NA	-4	True	NA	NA	NA	38178350	38230381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38178421_38179089_38179146_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_12670.known	chr1	+	2393	3	FSM	ENSG00000230426.5	ENST00000429725.1	2393	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTCTAGAAATCATTTCA	NA	False	NA	NA	False	AATAAA	-23	NA	187641225	187643860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_187641270_187641375_187641482_187641617
transcript_126708.known	chr7	-	353	2	FSM	ENSG00000249978.1	ENST00000427089.1	353	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGATTCACACCTGCC	159	False	NA	NA	False	NA	NA	NA	38335514	38335040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_38335351_38335471
transcript_126717.nnic	chr7	+	779	4	NIC	ENSG00000281103.3	novel	728	4	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	8.9566858950296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGAGGTTGTATGTCCT	-3	True	NA	15	True	AATAAA	-16	NA	38331052	38373584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_38331397_38336716_38336827_38350345_38350451_38373364
transcript_126722.nnic	chr7	+	986	4	FSM	ENSG00000281103.3	ENST00000687516.1	1007	4	4	17	4	0	multi-exon	FALSE	canonical	3	4	junction_2	4.02768199119819	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATAGTCAATTATTTAA	-3	True	NA	NA	False	GATAAA	-22	NA	38331052	38342705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38331397_38332791_38332874_38336716_38336827_38342255
transcript_126724.nnic	chr7	+	1449	4	NIC	ENSG00000281103.3	novel	1007	4	NA	NA	4	-2158	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	3.85861230093008	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTGTAAAACAGCCTC	-3	True	NA	NA	False	NA	NA	NA	38331052	38376469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_38331397_38332791_38332874_38336716_38336827_38375556
transcript_126726.nnic	chr7	+	900	3	FSM	ENSG00000281103.3	ENST00000690659.1	979	3	79	0	8	0	multi-exon	FALSE	canonical	3	5	junction_2	8.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATAGTCAATTATTTAA	1	True	NA	NA	False	GATAAA	-22	NA	38331056	38342705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38331397_38336716_38336827_38342255
transcript_126727.nnic	chr7	+	665	3	FSM	ENSG00000281103.3	ENST00000691500.1	581	3	-84	0	14	0	multi-exon	FALSE	canonical	1	3	junction_2	9.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGAGGTTGTATGTCCTT	7	True	NA	16	True	AATAAA	-17	NA	38331062	38373585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38331397_38336716_38336827_38373364
transcript_126728.nnic	chr7	+	1367	3	NIC	ENSG00000281103.3	novel	979	3	NA	NA	4	-2158	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	8	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTGTAAAACAGCCTC	-3	True	NA	NA	False	NA	NA	NA	38331052	38376469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_38331397_38336716_38336827_38375556
transcript_126730.known	chr7	+	670	2	FSM	ENSG00000281103.3	ENST00000629576.2	1019	2	211	138	-38	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAAATAGTCAATTATT	158	False	NA	NA	False	GATAAA	-19	NA	38341576	38342702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38341800_38342255
transcript_126731.known	chr7	-	3145	20	FSM	ENSG00000078053.17	ENST00000325590.9	3145	20	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	5.67884737241849	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTGATGAGTCTTTT	-22	True	NA	-11	True	AATAAA	-30	NA	38631420	38383703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_38384926_38389803_38389906_38391747_38392018_38394004_38394215_38422420_38422478_38426953_38426987_38429841_38429866_38432188_38432213_38436271_38436389_38461282_38461412_38462974_38463114_38465466_38465550_38466172_38466249_38475330_38475417_38476861_38476970_38491049_38491146_38494432_38494528_38503649_38503705_38534930_38535012_38631282
transcript_126737.known	chr7	-	5854	29	FSM	ENSG00000006715.16	ENST00000310301.9	5854	29	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_12	21.8817555166352	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	1	True	NA	50	True	AATAAA	-13	NA	38909191	38722973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_126746.nic	chr7	-	1151	13	ISM	ENSG00000006715.16	ENST00000310301.9	5854	29	-12	49554	-12	71	5prime_fragment	FALSE	canonical	3	165	junction_12	23.0066415531593	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGTACCCTTGATTTT	-11	True	NA	NA	False	AAGAAA	-1	NA	38909203	38772527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_126750.nnic	chr7	-	928	8	NNC	ENSG00000006715.16	novel	5854	29	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	73.706810252181	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	-11	True	NA	50	True	AATAAA	-13	NA	38909203	38722973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_38723465_38817858_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_126756.known	chr7	-	3181	28	FSM	ENSG00000006715.16	ENST00000395969.6	3181	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_24	41.8745923142122	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGGACTCACTTTTACT	18	False	NA	-5	True	AATAAA	-18	NA	38909174	38725554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_126758.nic	chr7	+	1719	2	ISM	ENSG00000106536.21	ENST00000517348.1	1578	6	-18	286627	-18	-45585	5prime_fragment	FALSE	canonical	3	18	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTACATAGACTACTAC	NA	False	NA	NA	False	AAGAAA	-36	NA	39013062	39087081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_39013560_39085859
transcript_126759.nic	chr7	+	1053	2	ISM	ENSG00000106536.21	ENST00000416452.1	1028	4	53941	-367	-4533	0	3prime_fragment	FALSE	canonical	2	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTAAACCAAAAACCA	NA	False	NA	NA	False	AAAAAG	-7	NA	39460558	39465077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_39460716_39464181
transcript_126762.known	chr7	-	522	4	FSM	ENSG00000224122.3	ENST00000653564.2	525	4	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTAAATTATGTTCAGTT	-18	False	NA	NA	False	AATAAA	-20	NA	39406579	39404597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_39404784_39404926_39405006_39406016_39406130_39406435
transcript_126764.known	chr7	+	871	3	FSM	ENSG00000241127.8	ENST00000223273.7	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_2	30	1893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	9	True	NA	12	True	ATTAAA	-17	NA	39566403	39572881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39566548_39570505_39570628_39572276
transcript_126765.known	chr7	+	425	3	FSM	ENSG00000241127.8	ENST00000448268.5	425	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	208.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGTGAAAATAATGCTGA	-1	True	NA	NA	False	AAAAAG	-25	NA	39566393	39572502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39566548_39570505_39570628_39572353
transcript_126767.known	chr7	+	660	2	FSM	ENSG00000241127.8	ENST00000474392.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAATTTACTTTAGTCC	-10	True	NA	NA	False	GATAAA	-4	NA	39566384	39571002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39566548_39570505
transcript_126769.known	chr7	+	2787	5	FSM	ENSG00000006451.8	ENST00000005257.7	2787	5	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_3	56.3443652905949	2207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTACTTGAT	-15	True	NA	17	True	AATAAA	-16	NA	39623571	39708120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122
transcript_126774.known	chr7	+	705	3	FSM	ENSG00000006451.8	ENST00000468201.1	705	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	487.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAATTTACTTTAAAA	-22	True	NA	105	True	ACTAAA	-24	NA	39623564	39706391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39623826_39696684_39696860_39706122
transcript_126779.known	chr7	-	7627	2	FSM	ENSG00000168303.9	ENST00000306984.8	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	0	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATATTTACTTTCTCTTC	5	True	NA	NA	False	ATTAAA	-18	NA	40134622	40126026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_40133260_40134228
transcript_126781.known	chr7	+	1617	14	FSM	ENSG00000175600.16	ENST00000335693.9	1617	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	8.60232526704263	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	10	True	NA	11	True	AATAAA	-25	NA	40135004	40860763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_126782.nnic	chr7	+	1565	14	NNC	ENSG00000175600.16	novel	1617	14	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	14.7980488078905	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	NA	False	NA	11	True	AATAAA	-25	NA	40134960	40860763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40617397_40617405_40749433_40749498_40860315
transcript_126784.known	chr7	+	1341	13	FSM	ENSG00000175600.16	ENST00000401647.7	1341	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	8.82546819658248	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATGAATCTAGTGCC	10	True	NA	NA	False	NA	NA	NA	40135004	40860631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_126788.known	chr7	-	1632	2	FSM	ENSG00000122641.11	ENST00000442711.1	1632	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAACAAAAAAAAA	0	True	NA	NA	False	ATTAAA	-10	NA	41700609	41689533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_41690543_41699986
transcript_126793.known	chr7	-	1765	2	FSM	ENSG00000106571.15	ENST00000428534.2	1765	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCAGCTTTTGGTTATC	NA	False	NA	-6	True	AATAAA	-26	NA	42237870	42221617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42223296_42237783
transcript_126795.known	chr7	-	1453	9	FSM	ENSG00000106588.12	ENST00000436986.5	1453	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	4662.6187317322	2527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATACTTAAGTGTCAAA	23	False	NA	-26	True	AATAAA	-3	NA	42932154	42916881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42931095_42931156_42932117
transcript_126797.known	chr7	-	1397	7	FSM	ENSG00000256646.8	ENST00000677581.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	2	104	junction_6	4030.32686846448	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	NA	False	NA	-5	True	AATAAA	-24	NA	42932214	42916860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42932117
transcript_126799.known	chr7	-	683	6	FSM	ENSG00000106588.12	ENST00000445517.1	683	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	4257.74384386849	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCAGCCTTTTAGGAG	-8	True	NA	-40	True	AATAAA	-12	NA	42932185	42917412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42932117
transcript_126802.known	chr7	-	1823	2	FSM	ENSG00000136197.14	ENST00000447342.5	1823	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTTCATTGTAT	-39	True	NA	-3	True	ATTAAA	-17	NA	42912090	42909274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42910922_42911914
transcript_126803.known	chr7	-	578	2	FSM	ENSG00000136197.14	ENST00000432637.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTTCATGTCTT	107	False	NA	NA	False	NA	NA	NA	42911944	42910645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42911194_42911914
transcript_126804.known	chr7	-	2430	9	FSM	ENSG00000256646.8	ENST00000442788.5	2430	9	0	0	0	0	multi-exon	FALSE	canonical	1	203	junction_1	3491.79761861638	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTTTCATTGTATTG	3	True	NA	-1	True	ATTAAA	-19	NA	42932174	42909272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42910922_42917513_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_126805.known	chr7	-	1434	8	FSM	ENSG00000106588.12	ENST00000223321.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	9757	junction_7	587.92537357896	21965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	3	True	NA	-5	True	AATAAA	-24	NA	42932174	42916860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_126806.known	chr7	-	1289	7	FSM	ENSG00000106588.12	ENST00000457444.6	1289	7	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_5	3949.47226080762	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGGCTTAAGGCTC	11	True	NA	-9	True	AATAAA	-20	NA	42932166	42916864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42927382_42927460_42932117
transcript_126807.known	chr7	-	5365	7	FSM	ENSG00000106588.12	ENST00000677139.1	5365	7	0	0	0	0	multi-exon	FALSE	canonical	3	9757	junction_6	629.680253956103	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAAGGAACCCGGGTT	-5	True	NA	29	True	NA	NA	NA	42932182	42916959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_126810.known	chr7	+	859	3	FSM	ENSG00000106591.4	ENST00000223324.3	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_2	61	11183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	8	True	NA	14	True	AATAAA	-24	NA	42932375	42937857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_42932517_42934954_42935137_42937321
transcript_126811.known	chr7	+	2734	3	FSM	ENSG00000106591.4	ENST00000432845.1	2734	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	564	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGATTCTTTATGTT	8	True	NA	11	True	AGTAAA	-17	NA	42932375	42937627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_42932517_42934954_42937242_42937321
transcript_126812.known	chr7	+	730	3	FSM	ENSG00000106591.4	ENST00000413995.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	20.5	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	2653	False	NA	14	True	AATAAA	-24	NA	42935020	42937857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_42935137_42937163_42937242_42937321
transcript_126817.nnic	chr7	+	524	3	Antisense	novelGene_ENSG00000232006.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTCAACAGATGTCCAT	NA	False	NA	NA	False	AATAAA	-18	NA	42965334	43009733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_42965585_42968048_42968118_43009528
transcript_12682.known	chr1	+	526	2	FSM	ENSG00000237457.6	ENST00000424735.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAACAAGAATATTAATT	34	False	NA	20	True	AATAAA	-37	NA	190479005	190480735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_190479141_190480344
transcript_126823.nnic	chr7	+	891	2	Antisense	novelGene_ENSG00000232006.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATTGTGATACCTTTGA	NA	False	NA	NA	False	AATAAA	-18	NA	42965326	42966565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_42965585_42965932
transcript_126825.nnic	chr7	+	976	2	Antisense	novelGene_ENSG00000232006.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCAACCTTTGCTCTTT	NA	False	NA	NA	False	TATAAA	-19	NA	42965326	42966650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_42965585_42965932
transcript_126827.nnic	chr7	+	1160	2	Antisense	novelGene_ENSG00000232006.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACCTTCTCCTTTCCTGA	NA	False	NA	4	True	ATTAAA	-17	NA	42965326	42966834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_42965585_42965932
transcript_12683.known	chr1	+	472	2	FSM	ENSG00000237457.6	ENST00000436905.5	472	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAACAAGAATATTAATT	226	False	NA	20	True	AATAAA	-37	NA	190478550	190480735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_190478632_190480344
transcript_126832.known	chr7	+	2888	4	FSM	ENSG00000002746.15	ENST00000471043.1	2888	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.64098759787715	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAAGCCCTGA	NA	False	NA	NA	False	GGGGCT	-31	NA	43396672	43440597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43396720_43396813_43396890_43407561_43407732_43438002
transcript_12684.known	chr1	+	522	1	FSM	ENSG00000231767.4	ENST00000647225.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2923	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATGACTTAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	192716131	192716653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_192716100_192716700
transcript_12685.known	chr1	+	1348	5	FSM	ENSG00000116741.8	ENST00000235382.7	1348	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	4.33012701892219	711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGAGTCTAGATGTGA	-2	True	NA	15	True	AATAAA	-25	NA	192809038	192812275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_192809182_192810165_192810268_192810369_192810432_192810980_192811148_192811401
transcript_126851.known	chr7	-	1737	7	FSM	ENSG00000106603.20	ENST00000415076.6	1737	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	369.402858979492	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTGAATGTCATT	-7	True	NA	-4	True	AATAAA	-15	NA	43729513	43608455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43609496_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_126852.known	chr7	-	1520	7	FSM	ENSG00000106603.20	ENST00000446330.6	1520	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	361.445900362542	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTCCCCAGCTTTTAAT	-7	True	NA	NA	False	NA	NA	NA	43729513	43608818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43609642_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_126856.known	chr7	-	1085	7	FSM	ENSG00000106603.20	ENST00000310564.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	462.800532987305	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	17	True	NA	-10	True	AATAAA	-17	NA	43729489	43639256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650492_43650713_43729428
transcript_126867.known	chr7	-	899	6	FSM	ENSG00000106603.20	ENST00000223336.11	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	96.5248154621391	6130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-17	True	NA	-10	True	AATAAA	-17	NA	43729523	43639256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_126876.known	chr7	+	1161	9	FSM	ENSG00000106605.11	ENST00000402924.5	1161	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	245.091692025658	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	-8	True	NA	18	True	ATTAAA	-20	NA	43758686	43807342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43758735_43760016_43760111_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_126892.known	chr7	+	1074	8	FSM	ENSG00000106605.11	ENST00000265523.9	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	55.1606189010876	4754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	-15	True	NA	18	True	ATTAAA	-20	NA	43758679	43807342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43758735_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_126895.known	chr7	-	3571	6	FSM	ENSG00000106608.17	ENST00000453200.6	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	18.095303258028	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	12	True	NA	-26	True	AATAAA	-16	NA	43906596	43875912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43906561
transcript_126903.known	chr7	-	3563	5	FSM	ENSG00000106608.17	ENST00000402306.7	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	30.6349473640808	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-7	True	NA	-26	True	AATAAA	-16	NA	43906615	43875912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43906561
transcript_126904.known	chr7	-	365	5	FSM	ENSG00000106608.17	ENST00000446958.1	365	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	41.6803310927349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACAATGTTCCTAGT	-19	True	NA	NA	False	AATAAA	-22	NA	43906627	43881137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43881276_43881658_43881698_43881906_43881958_43887414_43887486_43906561
transcript_126907.known	chr7	-	729	4	FSM	ENSG00000062582.14	ENST00000467084.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	604.880704491941	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCGTGGGCTACAGTG	68	False	NA	NA	False	NA	NA	NA	43869893	43866804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869523
transcript_126912.known	chr7	-	667	4	FSM	ENSG00000062582.14	ENST00000317534.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_3	180.392781328842	9879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-9	True	NA	-9	True	AATAAA	-15	NA	43869517	43866557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869456
transcript_126913.known	chr7	-	743	3	FSM	ENSG00000062582.14	ENST00000418740.5	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_2	23.5	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTGCCTCTCTGTTT	-9	True	NA	-13	True	AATAAA	-11	NA	43869517	43866561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43866983_43868962_43869075_43869307
transcript_126916.known	chr7	+	849	8	FSM	ENSG00000078967.13	ENST00000450743.5	849	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	20.1129463839811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATTGTTGTTATGATCTG	-12	True	NA	NA	False	NA	NA	NA	43926437	43952907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43926557_43928013_43928112_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_126919.known	chr7	+	3982	7	FSM	ENSG00000078967.13	ENST00000222402.8	3982	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	13.0256157883866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGTCAATGATTTCCT	-14	True	NA	28	True	TATAAA	-20	NA	43926435	43956136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_126927.known	chr7	+	783	5	FSM	ENSG00000078967.13	ENST00000446008.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	12.8135670287395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGGTTGAAGTTGAAGA	66	False	NA	NA	False	AATAAA	-17	NA	43926515	43949199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631
transcript_126932.nic	chr7	-	514	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	-39	72667	-13	-47222	5prime_fragment	FALSE	canonical	3	110	junction_1	190.222676531129	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	-25	False	NA	NA	False	ATTAAA	-18	NA	44019188	44013561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
transcript_126935.known	chr7	-	324	3	FSM	ENSG00000272655.2	ENST00000418424.2	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	200.5	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGGGGCCTGGAGGGGC	50	False	NA	NA	False	NA	NA	NA	44019113	44014602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44014784_44016433_44016524_44019060
transcript_126937.known	chr7	+	2068	13	FSM	ENSG00000136279.21	ENST00000468694.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_8	125.076310040444	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTGTCTTCCCC	12	True	NA	24	True	NA	NA	NA	44044710	44061637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058877_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_126939.known	chr7	+	2117	13	FSM	ENSG00000136279.21	ENST00000494774.5	2117	13	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_7	96.9540269062267	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	18	True	NA	25	True	NA	NA	NA	44044716	44061716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_126942.known	chr7	+	1401	13	FSM	ENSG00000136279.21	ENST00000498733.5	1401	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	126.172143210069	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCTCAGACATGGCTTC	3	True	NA	NA	False	NA	NA	NA	44044701	44060939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044867_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_126945.known	chr7	+	1513	12	FSM	ENSG00000136279.21	ENST00000452943.5	1513	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	132.991766351738	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCTGCCTGTGGCCA	3	True	NA	NA	False	NA	NA	NA	44044701	44061172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_126946.known	chr7	+	1622	12	FSM	ENSG00000136279.21	ENST00000429716.5	1622	12	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	117.702524601304	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACCCTTGGGAACAGT	9	True	NA	-74	True	NA	NA	NA	44044707	44061328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_126950.known	chr7	-	837	3	FSM	ENSG00000164708.6	ENST00000297283.4	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGTCCAGCGCAGCC	-1	True	NA	0	True	AATAAA	-17	NA	44065567	44062726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44062931_44064831_44065013_44065115
transcript_126954.known	chr7	-	2561	11	FSM	ENSG00000122678.17	ENST00000430942.5	2561	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	17.7211737760229	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGCAGTAAAGTTGA	-14	True	NA	NA	False	ATTAAA	-11	NA	44082514	44072261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074221_44074397_44074531_44076508_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_126960.known	chr7	-	1649	6	FSM	ENSG00000122678.17	ENST00000492605.5	1649	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	19.0682982984848	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAAGGAATGAATTCG	22	True	NA	NA	False	NA	NA	NA	44082478	44075718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_126962.known	chr7	+	4097	21	FSM	ENSG00000106624.11	ENST00000223357.8	4097	21	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_2	26.8441800023767	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTGCTCACATTCTGAG	-4	True	NA	14	True	AATAAA	-15	NA	44104344	44114560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44104919_44106545_44106888_44107438_44107511_44107628_44107701_44107808_44107932_44108006_44108085_44108898_44108977_44109106_44109185_44109287_44109342_44110014_44110125_44110206_44110347_44110724_44110810_44110912_44111058_44111153_44111240_44111506_44111631_44111853_44112051_44112141_44112322_44112557_44112910_44112990_44113131_44113251_44113352_44113593
transcript_126968.known	chr7	-	1609	11	FSM	ENSG00000106628.12	ENST00000610533.6	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_10	252.650034632889	2426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-7	True	NA	-17	True	AATAAA	-30	NA	44123548	44114679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
transcript_126969.known	chr7	-	1597	10	FSM	ENSG00000106628.12	ENST00000223361.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	508.901212854169	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGATGCGAGCCTTGAG	1471	False	NA	-36	True	AATAAA	-11	NA	44122196	44114698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44114946_44115294_44115355_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833
transcript_126970.known	chr7	-	1659	11	FSM	ENSG00000106628.12	ENST00000452185.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	484.63165393936	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAAAGTGGTTTTGAC	11	True	NA	-31	True	GGGGCT	-11	NA	44123530	44114784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122283_44123510
transcript_126987.known	chr7	-	612	7	FSM	ENSG00000106631.8	ENST00000223364.7	612	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	26.1512693552127	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-2	True	NA	-4	True	AATAAA	-20	NA	44141332	44138863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44141075_44141302
transcript_126988.known	chr7	-	646	6	FSM	ENSG00000106631.8	ENST00000457314.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	53.4288311681998	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGCTGTGGTGTCTT	468	False	NA	-9	True	AATAAA	-15	NA	44141074	44138868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140857_44140960
transcript_126989.known	chr7	-	791	6	FSM	ENSG00000106631.8	ENST00000458240.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	13.720058308914	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGTGGTGTCTTGTC	257	False	NA	-6	True	AATAAA	-18	NA	44141285	44138865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960
transcript_126990.known	chr7	-	634	6	FSM	ENSG00000106631.8	ENST00000434895.5	634	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	63.8228799099508	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGCTGTGGTGTCTT	506	False	NA	-9	True	AATAAA	-15	NA	44141036	44138868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44139023_44139520_44139665_44139781_44139861_44140322_44140428_44140711_44140788_44140960
transcript_126992.known	chr7	-	1311	3	FSM	ENSG00000106633.18	ENST00000336642.9	1311	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	10.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	NA	False	NA	-4	True	ATTAAA	-19	NA	44146144	44144274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44145281_44145496_44145731_44146073
transcript_126994.nnic	chr7	+	656	2	Antisense	novelGene_ENSG00000106633.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATAGCAGCATGATTTAT	-1	True	NA	NA	False	AATAAA	-19	NA	44194274	44198236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_44194339_44197644
transcript_126996.known	chr7	-	1641	2	FSM	ENSG00000106633.18	ENST00000459642.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGTCCACTGTTCTTT	NA	False	NA	-2	True	ATTAAA	-21	NA	44146129	44144272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44145281_44145496
transcript_126997.known	chr7	+	2767	7	FSM	ENSG00000106636.9	ENST00000223369.3	2767	7	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_6	44.0621404634662	1328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGTCCTGTGCTTTCTT	-10	True	NA	28	True	GATAAA	-18	NA	44200977	44214294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
transcript_1270.nnic	chr1	-	931	6	NNC	ENSG00000049247.14	novel	1601	7	NA	NA	-59756	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.01980390271856	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATGAGTGGTTATTTTC	-12	True	NA	NA	False	AATAAA	-19	NA	7913268	7847611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_7847883_7849639_7849684_7850811_7850923_7852900_7853119_7853306_7853506_7913180
transcript_127000.known	chr7	-	8036	6	FSM	ENSG00000015676.18	ENST00000355451.8	8036	6	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_2	22.6627447587445	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGTTGCTTTTCT	-22	True	NA	-9	True	TATAAA	-7	NA	44490658	44379118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44386122_44392296_44392486_44404439_44404584_44427570_44427704_44484967_44485285_44490408
transcript_127008.nic	chr7	-	378	2	ISM	ENSG00000015676.18	ENST00000355451.8	8036	6	-48	106086	-48	-136	5prime_fragment	FALSE	canonical	3	351	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAGGAAGAGGCCAAGA	195	False	NA	15	True	AAGAAA	-1	NA	44490706	44485204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_44485285_44490408
transcript_127009.known	chr7	+	408	1	FSM	ENSG00000146677.7	ENST00000487895.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCGTGTGCACGTTTT	24	False	NA	NA	False	AAGAAA	-9	NA	44467896	44468304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44467900_44468300
transcript_127014.known	chr7	-	1853	14	FSM	ENSG00000136271.11	ENST00000446987.5	1853	14	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_10	78.1776916983991	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	20	True	NA	-17	True	AATAAA	-17	NA	44573895	44565803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572562_44572745_44572889_44573051_44573582_44573745_44573835
transcript_127015.known	chr7	-	2294	5	FSM	ENSG00000158604.15	ENST00000457408.7	2294	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	215.65757000393	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-10	True	NA	NA	False	ATTAAA	-23	NA	44582231	44577893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44579629_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_127016.known	chr7	-	1950	3	FSM	ENSG00000158604.15	ENST00000477639.5	1950	3	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	93	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATCTAGTAATAGCCATTG	11	True	NA	-15	True	AATAAA	-20	NA	44582210	44579903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44581240_44581448_44581575_44581722
transcript_127017.known	chr7	+	1158	1	FSM	ENSG00000287574.1	ENST00000658337.1	1158	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTCAGTGTGTGTCTCTA	8460	False	NA	NA	False	ATTAAA	-36	NA	44582518	44583676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44582500_44583700
transcript_127018.nnic	chr7	+	941	3	NNC	ENSG00000105953.16	novel	789	6	NA	NA	-2	-41773	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	0.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGATGTAAGTCATGTC	-5	True	NA	5	True	NA	NA	NA	44606585	44625078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_44606654_44618823_44618935_44624316
transcript_127019.known	chr7	+	1744	9	FSM	ENSG00000105953.16	ENST00000443864.6	1744	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	41.8292660705397	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATGTGTGTGTGTGTG	-3	True	NA	12	True	AATAAA	-24	NA	44606587	44676594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969
transcript_127020.known	chr7	+	4193	23	FSM	ENSG00000105953.16	ENST00000222673.6	4193	23	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	35.2865483699918	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	0	True	NA	8	True	CATAAA	-17	NA	44606626	44709066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_127034.known	chr7	+	2337	6	FSM	ENSG00000196262.15	ENST00000677107.1	2337	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8155.89619845667	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	0	True	NA	34	True	AATAAA	-19	NA	44796680	44803115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44797519_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_127050.known	chr7	+	446	2	FSM	ENSG00000196262.15	ENST00000620047.5	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	4727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	12	False	NA	6	True	AATAAA	-17	NA	44796692	44801631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44801286
transcript_127051.known	chr7	+	2237	5	FSM	ENSG00000196262.15	ENST00000468812.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	16368	junction_4	867.485554634773	74153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTAGTATTTCTTATTCC	0	True	NA	36	True	AATAAA	-21	NA	44796680	44803117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_127052.known	chr7	+	907	6	FSM	ENSG00000196262.15	ENST00000489459.5	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	8056.84866433521	3310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCGTTTGAGTTAAGAG	0	True	NA	5	True	AATAAA	-16	NA	44796680	44801630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_127053.known	chr7	+	818	6	FSM	ENSG00000196262.15	ENST00000355968.10	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	8048.95907804233	3629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	0	True	NA	6	True	AATAAA	-17	NA	44796680	44801631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44798747_44798815_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_127054.known	chr7	+	863	6	FSM	ENSG00000196262.15	ENST00000415933.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8547.84226340192	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCCTCGTTTGAGT	1	True	NA	-1	True	AATAAA	-10	NA	44796681	44801624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44800423_44800544_44801286
transcript_127056.known	chr7	-	3026	5	FSM	ENSG00000105968.19	ENST00000308153.9	3026	5	0	0	0	0	multi-exon	FALSE	canonical	3	2098	junction_4	183.778909290484	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTGTTCTGTTTTGC	-9	True	NA	-2	True	TATAAA	-18	NA	44848087	44831977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_127057.known	chr7	-	3804	5	FSM	ENSG00000105968.19	ENST00000222690.10	3804	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	1007.59475360881	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTATGGACTAAATATTT	1	True	NA	-4	True	ATTAAA	-18	NA	44848077	44826790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44830164_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_127067.known	chr7	-	687	4	FSM	ENSG00000105968.19	ENST00000350771.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	1123.51393207007	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	2	True	NA	-22	True	GATAAA	-20	NA	44848076	44834227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44847968
transcript_127069.known	chr7	-	596	4	FSM	ENSG00000105968.19	ENST00000349299.7	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	1040.01185890675	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	57	False	NA	-22	True	GATAAA	-20	NA	44848021	44834227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44834563_44835528_44835659_44843276_44843355_44847968
transcript_127071.known	chr7	-	628	4	FSM	ENSG00000105968.19	ENST00000381124.9	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	962.819124585021	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATTAATTTGTCTCA	-2	True	NA	-33	True	GATAAA	-9	NA	44848080	44834238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44834563_44840898_44841013_44843276_44843355_44847968
transcript_127074.known	chr7	-	1041	4	FSM	ENSG00000105968.19	ENST00000446531.1	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	2098	junction_3	203.697488120661	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTCCCAGCTACTCAGG	-5	True	NA	NA	False	AATACA	-30	NA	44848083	44834924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44835659_44840898_44841013_44843276_44843355_44847968
transcript_127079.nnic	chr7	+	550	3	NNC	ENSG00000234183.1	novel	281	2	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCTCCAGCGATCGTT	393	False	NA	NA	False	ATTAAA	-18	NA	44848458	44849565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_44848522_44848852_44849233_44849458
transcript_127081.known	chr7	+	188	2	FSM	ENSG00000234183.1	ENST00000443162.1	188	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCAGCGATCGTTTTT	350	False	NA	NA	False	ATTAAA	-21	NA	44848415	44849568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44848494_44849458
transcript_127084.known	chr7	-	505	5	FSM	ENSG00000232956.10	ENST00000584327.5	505	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	208.504646231205	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTCTGCTTCCAGAAT	270	False	NA	-117	True	NA	NA	NA	44986560	44983136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44983958_44984356_44984427_44986020_44986098_44986524
transcript_127085.known	chr7	-	953	5	FSM	ENSG00000232956.10	ENST00000585030.6	956	5	0	3	0	-1	multi-exon	FALSE	canonical	3	13	junction_3	204.917666393115	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	161	False	44986691	-6	True	AATAAA	-17	NA	44986669	44983025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44985881_44986098_44986524
transcript_127087.known	chr7	-	982	5	FSM	ENSG00000232956.10	ENST00000578968.6	986	5	0	4	0	0	multi-exon	FALSE	canonical	3	409	junction_3	44.6682213659778	3001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	-4	True	NA	-3	True	AATAAA	-20	NA	44986834	44983022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986020_44986098_44986524
transcript_127089.known	chr7	-	1346	4	FSM	ENSG00000232956.10	ENST00000668580.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_2	47.6818157745231	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	131	False	NA	-3	True	AATAAA	-20	NA	44986699	44983022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44984047_44984356_44984427_44986020_44986098_44986524
transcript_127090.known	chr7	-	710	4	FSM	ENSG00000232956.10	ENST00000580458.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	218.786552501646	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATGTGATTTAGTCTT	-14	True	NA	-14	True	AATAAA	-9	NA	44986650	44983033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986524
transcript_127091.known	chr7	-	2344	4	FSM	ENSG00000232956.10	ENST00000653305.1	2344	4	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_2	37.2588542795162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGGTATCTCCTGAAT	165	False	44986691	-66	True	NA	NA	NA	44986665	44983085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44986098_44986524
transcript_127093.known	chr7	-	731	4	FSM	ENSG00000232956.10	ENST00000579383.6	732	4	0	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_2	224.423706412669	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-20	True	NA	-6	True	AATAAA	-17	NA	44986656	44983025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44986020_44986098_44986524
transcript_127095.known	chr7	-	1123	4	FSM	ENSG00000232956.10	ENST00000667823.2	1124	4	0	1	0	-1	multi-exon	FALSE	canonical	3	409	junction_2	46.8069320602076	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	162	False	44986691	-6	True	AATAAA	-17	NA	44986668	44983025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984427_44986020_44986098_44986524
transcript_127098.known	chr7	-	509	3	FSM	ENSG00000232956.10	ENST00000438705.3	509	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	244.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGTATCTCCTGAATG	260	False	NA	-65	True	NA	NA	NA	44986570	44983084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44986524
transcript_127099.known	chr7	-	2998	3	FSM	ENSG00000232956.10	ENST00000580528.2	2998	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_1	13.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTAAATATGTGATTTAG	NA	False	NA	-18	True	AATAAA	-5	NA	44986961	44983037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44986098_44986524
transcript_1271.known	chr1	+	624	7	FSM	ENSG00000116288.13	ENST00000493373.5	624	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1650.17915694024	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGCGAACTGCGACGA	255	False	NA	NA	False	NA	NA	NA	7954290	7985052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7954324_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_127102.known	chr7	-	1626	3	FSM	ENSG00000232956.10	ENST00000582727.3	1637	3	6	5	-5	-3	multi-exon	FALSE	canonical	3	409	junction_1	55	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTAGTCTTGCCTGT	156	False	NA	-8	True	AATAAA	-15	NA	44986674	44983027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44984427_44986020_44986098_44986524
transcript_127103.known	chr7	-	3228	2	FSM	ENSG00000232956.10	ENST00000667119.1	3228	2	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTAAATATGTGATTTA	-2	True	NA	-19	True	AATAAA	-4	NA	44986693	44983038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44986098_44986524
transcript_127105.known	chr7	+	1983	10	FSM	ENSG00000136280.17	ENST00000461377.5	1983	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	116.776879159245	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	NA	False	NA	-62	True	NA	NA	NA	44999474	45076352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44999858_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_127107.nic	chr7	+	1693	9	NIC	ENSG00000136280.17	novel	1983	10	NA	NA	254	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	168.372680013712	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	NA	False	NA	39	True	AAAAAG	-28	NA	44999728	45076453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_44999858_45038252_45038427_45063917_45064002_45064462_45064647_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_127108.nnic	chr7	+	1650	9	NIC	ENSG00000136280.17	novel	1983	10	NA	NA	260	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	132.207223705817	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	NA	False	NA	39	True	AAAAAG	-28	NA	44999734	45076453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_44999858_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_127119.nnic	chr7	+	1098	5	NIC	ENSG00000136280.17	novel	1983	10	NA	NA	271	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	191.677300429654	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	-5	True	NA	39	True	AAAAAG	-28	NA	44999745	45076453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_44999858_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_127120.nnic	chr7	-	1022	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	17.3853386507137	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCTCTGCATGAATTAT	-13	True	NA	1	True	AATAAA	-23	NA	45000008	44988763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44989048_44992612_44992850_44995028_44995145_44999279_44999374_44999717
transcript_127122.nnic	chr7	-	1043	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	13.5462171841441	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	NA	False	NA	-1	True	AATAAA	-21	NA	45000061	44988765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999279_44999374_44999717
transcript_127127.nnic	chr7	-	937	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	20.9973543306982	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCTCTGCATGAATTAT	NA	False	NA	1	True	AATAAA	-23	NA	45000017	44988763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44989048_44992612_44992850_44995028_44995145_44999717
transcript_127129.nnic	chr7	-	905	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_3	18.4028983224563	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	NA	False	NA	-1	True	AATAAA	-21	NA	45000017	44988765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999717
transcript_127132.nnic	chr7	-	931	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	21.9139732185248	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCACAGTCTTAAAAGAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	45000017	44992049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44992328_44992612_44992850_44995028_44995145_44999717
transcript_127137.known	chr7	-	2190	11	FSM	ENSG00000136270.14	ENST00000494076.5	2190	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	208.175526899778	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	-3	True	NA	-3	True	NA	NA	NA	45111706	45100100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109244_45111642
transcript_127139.nic	chr7	-	2236	11	NIC	ENSG00000136270.14	novel	2226	11	NA	NA	-10	0	intron_retention	FALSE	canonical	3	120	junction_10	179.011619734586	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-25	True	NA	-2	True	NA	NA	NA	45111728	45100099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111663
transcript_127149.known	chr7	-	2225	9	FSM	ENSG00000136270.14	ENST00000395655.8	2225	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	273.386145177476	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	NA	False	NA	-2	True	NA	NA	NA	45112047	45100099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111663
transcript_127153.known	chr7	-	2226	11	FSM	ENSG00000136270.14	ENST00000258770.8	2226	11	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_8	70.4204515748089	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	6	True	NA	-2	True	NA	NA	NA	45111697	45100099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111642
transcript_127154.known	chr7	-	1917	9	FSM	ENSG00000136270.14	ENST00000361278.7	1917	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	217.327769452042	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-15	True	NA	-2	True	NA	NA	NA	45111718	45100099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111642
transcript_127155.known	chr7	+	1323	3	FSM	ENSG00000122679.8	ENST00000242249.8	1323	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTGTTTCATGT	-21	True	NA	4	True	AGTAAA	-19	NA	45157790	45184250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_45157887_45177308_45177442_45183156
transcript_127159.nic	chr7	-	1728	13	FSM	ENSG00000214765.9	ENST00000338231.8	1716	13	-16	4	3	0	multi-exon	FALSE	canonical	3	25	junction_1	50.995846780781	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATCATTGCATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	45769034	45723787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45724024_45724352_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_127163.nnic	chr7	-	2035	12	FSM	ENSG00000214765.9	ENST00000686032.1	1978	12	-59	2	3	0	multi-exon	FALSE	canonical	3	14	junction_2	51.6597258289983	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	-2	True	NA	NA	NA	45769034	45726332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45726862_45728177_45728314_45728831_45729027_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_127166.nnic	chr7	-	1976	12	FSM	ENSG00000214765.9	ENST00000690179.1	1875	12	-101	0	3	0	multi-exon	FALSE	canonical	1	2	junction_3	54.8606047215415	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	-2	True	NA	NA	NA	45769034	45726332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45726862_45728177_45728314_45736786_45736911_45739379_45739516_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_127170.nnic	chr7	-	1840	11	FSM	ENSG00000214765.9	ENST00000686085.1	1822	11	-20	2	3	0	multi-exon	FALSE	canonical	3	74	junction_1	26.1426854014655	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	-2	True	NA	NA	NA	45769034	45726332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45726862_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_127178.nic	chr7	-	1175	9	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	3	8182	3	0	5prime_fragment	FALSE	canonical	3	111	junction_4	19.7800404448525	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATATATTTTTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	45769034	45736786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_127180.nic	chr7	-	884	6	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	3	20039	3	9340	5prime_fragment	FALSE	canonical	3	111	junction_1	21.9399179579141	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTTAAAAAGATAAAGGT	NA	False	NA	NA	False	AATATA	-38	NA	45769034	45748643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_127181.known	chr7	-	1920	13	FSM	ENSG00000214765.9	ENST00000428414.5	1920	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	58.0442838605912	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCCTCTCTCTTTC	11	True	NA	-6	True	AATAAA	-14	NA	45768964	45724049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45724481_45726183_45726237_45728177_45728314_45728831_45729027_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_127182.known	chr7	-	3006	14	FSM	ENSG00000214765.9	ENST00000429741.5	3006	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	62.6523232567433	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTATCATTGCATCCTG	21	True	NA	NA	False	AATAAA	-24	NA	45768954	45723786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45724024_45724352_45725716_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45746826_45746949_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_127183.known	chr7	+	10247	17	FSM	ENSG00000272556.3	ENST00000609439.2	10247	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.9137525574439	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGGAGTGAGTTTCT	16	False	NA	25	True	TATAAA	-16	NA	45769104	45815263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_45769468_45773563_45773674_45774759_45774892_45778186_45778403_45779274_45779341_45781494_45781554_45782644_45782915_45788718_45788955_45791787_45791853_45795074_45795199_45797042_45797141_45797477_45797675_45798538_45798708_45804231_45804351_45805098_45805290_45807339_45807398_45807489
transcript_127194.known	chr7	-	1125	8	FSM	ENSG00000136273.13	ENST00000432325.5	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	40.9020731972932	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTCTGTTTTGCT	2	True	NA	-6	True	GATAAA	-15	NA	47979553	47965165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_127195.known	chr7	-	3007	8	FSM	ENSG00000136273.13	ENST00000258774.10	3007	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	16.5591087209624	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGGTGTCTGTTTCTG	3	True	NA	-1	True	AAGAAA	-18	NA	47979615	47963287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_127206.known	chr7	-	548	3	FSM	ENSG00000136273.13	ENST00000468868.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	0.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCCTCATTTTAAAATT	2	True	NA	NA	False	TTTAAA	-43	NA	47979553	47978259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_47978594_47978688_47978817_47979467
transcript_127209.known	chr7	+	2056	9	FSM	ENSG00000164746.14	ENST00000430738.5	2056	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.968245836551854	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTTTCCCTTTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	48035510	48061304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48035631_48036292_48036364_48041333_48041520_48043480_48043590_48046459_48046617_48049879_48049978_48052699_48052924_48054594_48054607_48060225
transcript_127219.known	chr7	+	782	6	FSM	ENSG00000183696.14	ENST00000417464.6	782	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	115.481600266016	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	110	False	NA	14	True	ATTAAA	-15	NA	48089375	48108419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48089419_48090249_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_127220.nic	chr7	+	958	6	NIC	ENSG00000183696.14	novel	918	7	NA	NA	104	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	85.4063229509385	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	214	False	NA	14	True	ATTAAA	-15	NA	48089479	48108419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_127225.known	chr7	+	955	6	FSM	ENSG00000183696.14	ENST00000395560.7	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	68.6364334737754	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	-1	True	NA	14	True	ATTAAA	-15	NA	48089264	48108419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_127226.known	chr7	+	1664	9	FSM	ENSG00000183696.14	ENST00000395564.9	1664	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	106.237646340645	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAATGAGAGATGACTG	-1	True	NA	NA	False	ATTAAA	-17	NA	48089264	48108736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_127230.known	chr7	-	572	5	FSM	ENSG00000132436.12	ENST00000448788.1	572	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	10.8483869768736	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAGATATTACGCATTCA	13	True	NA	NA	False	NA	NA	NA	50450336	50447182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_50447298_50447967_50448056_50448180_50448290_50449499_50449724_50450300
transcript_127232.known	chr7	-	582	4	FSM	ENSG00000132436.12	ENST00000422854.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	9.10433352249844	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGTCAATAAATAATGTT	-19	True	NA	NA	False	NA	NA	NA	50450368	50446980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_50447298_50447967_50448056_50448180_50448290_50450300
transcript_127234.known	chr7	-	3930	4	FSM	ENSG00000132436.12	ENST00000433017.6	3930	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	10.2089285540757	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGCTTGCATTCTAA	-1	True	NA	-18	True	ATTAAA	-19	NA	50450350	50444132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_50447298_50448180_50448290_50449117_50449724_50450300
transcript_127237.known	chr7	-	3368	3	FSM	ENSG00000132436.12	ENST00000615084.4	3368	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTGCATTCTAAATTG	NA	False	NA	-14	True	ATTAAA	-23	NA	50450390	50444128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_50447298_50448180_50448290_50450300
transcript_127240.known	chr7	+	3401	4	FSM	ENSG00000170419.11	ENST00000302287.7	3401	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCTTCATTTATTCAT	13	False	NA	NA	False	AATAAA	-14	NA	54542324	54552531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_54542810_54544621_54544789_54546946_54546998_54549833
transcript_127244.known	chr7	+	377	1	FSM	ENSG00000232612.1	ENST00000431058.1	377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGATCGTCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	54656357	54656734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_54656400_54656700
transcript_127249.known	chr7	-	732	5	FSM	ENSG00000132432.14	ENST00000415949.5	732	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1836.44988701026	10826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	NA	False	NA	-21	True	ATTAAA	-17	NA	54759974	54752252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157_54759335_54759790
transcript_127252.known	chr7	-	512	4	FSM	ENSG00000132432.14	ENST00000450622.1	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	2042.14413464541	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAATATCTCTTTTTT	-1	True	NA	-25	True	ATTAAA	-13	NA	54759182	54752256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759037
transcript_127256.known	chr7	-	425	4	FSM	ENSG00000132432.14	ENST00000352861.9	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_3	770.798719943583	15371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-7	True	NA	-21	True	ATTAAA	-17	NA	54759211	54752252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157
transcript_127257.known	chr7	-	661	3	FSM	ENSG00000132432.14	ENST00000480303.1	661	3	0	0	0	0	multi-exon	FALSE	canonical	3	2861	junction_2	812	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCAGATTGCCTAGATCC	NA	False	NA	NA	False	NA	NA	NA	54759241	54755404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_54755882_54757494_54757595_54759157
transcript_127260.known	chr7	-	2939	5	FSM	ENSG00000154978.13	ENST00000285279.10	2939	5	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_1	71.6467026456905	1778	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGATTGTTTTGTT	7	True	NA	-9	True	AATAAA	-15	NA	55572502	55470612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_55473046_55492281_55492419_55497612_55497691_55521071_55521131_55572270
transcript_127263.nnic	chr7	+	635	3	NNC	ENSG00000226278.1	novel	261	2	NA	NA	-14795	395	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2373	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTGTGGAATTTGCAG	NA	False	NA	20	True	AATAAA	-21	NA	55750001	55773683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_55750110_55752647_55752672_55773180
transcript_127264.nnic	chr7	+	614	3	NNC	ENSG00000226278.1	novel	261	2	NA	NA	-12807	395	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	2201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTGTGGAATTTGCAG	NA	False	NA	20	True	AATAAA	-21	NA	55751989	55773683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_55752077_55752647_55752672_55773180
transcript_127265.nnic	chr7	+	427	3	NNC	ENSG00000226278.1	novel	261	2	NA	NA	8363	5782	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGATGGAGTTTCACTC	NA	False	NA	9	True	AATAAA	-13	NA	55773159	55779070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_55773243_55773654_55773741_55778812
transcript_127266.known	chr7	+	261	2	FSM	ENSG00000226278.1	ENST00000450062.1	261	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCATTGTCATACAGCTC	NA	False	NA	NA	False	NA	NA	NA	55764796	55773288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_55764950_55773180
transcript_127268.known	chr7	+	1993	10	FSM	ENSG00000146729.10	ENST00000322090.8	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_6	52.0934582751206	6090	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCACGTTTGGATTTTCTT	-8	True	NA	28	True	AATAAA	-19	NA	55964584	56000179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_55964702_55978125_55978266_55978349_55978396_55981472_55981568_55982209_55982281_55983727_55983869_55984846_55984879_55994893_55994989_55997365_55997450_55999007
transcript_127277.known	chr7	+	1786	3	FSM	ENSG00000239789.6	ENST00000285298.9	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	157.5	5493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTCTTACATCCT	0	True	NA	18	True	AATAAA	-15	NA	55951876	55956500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_55951931_55953178_55953319_55954908
transcript_127281.known	chr7	+	718	3	FSM	ENSG00000239789.6	ENST00000443449.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	348.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAGCGGGAGTGGAAG	39	False	NA	-72	True	NA	NA	NA	55951962	55955172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_55952277_55953178_55953319_55954908
transcript_12730.known	chr1	+	8291	9	FSM	ENSG00000116747.13	ENST00000400968.7	8291	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	17.4243902332334	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	-18	True	NA	NA	False	NA	NA	NA	193059611	193091219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193059777_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_127308.known	chr7	-	1974	8	FSM	ENSG00000146733.14	ENST00000275605.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	150.438271292207	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTTGTGGAATTTTCAG	-13	True	NA	-20	True	AATAAA	-21	NA	56051444	56011063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034107_56051137
transcript_127310.known	chr7	-	2178	8	FSM	ENSG00000146733.14	ENST00000395471.7	2178	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_7	119.86182521077	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	-27	True	NA	-24	True	AATAAA	-17	NA	56051604	56011067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034155_56051137
transcript_127338.known	chr7	+	2584	14	FSM	ENSG00000146731.11	ENST00000275603.9	2584	14	0	0	0	0	multi-exon	FALSE	canonical	3	2378	junction_7	278.997105030473	4602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	-13	True	NA	32	True	AATAAA	-18	NA	56051764	56063989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_127339.known	chr7	+	745	2	FSM	ENSG00000146731.11	ENST00000466479.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	3439	junction_1	0	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAGGAAATGGGAAGAGG	923	False	NA	82	True	NA	NA	NA	56062618	56063620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56062756_56063012
transcript_12734.known	chr1	+	7848	8	FSM	ENSG00000116747.13	ENST00000432079.5	7848	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	30.3711732283313	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	0	True	NA	NA	False	NA	NA	NA	193059453	193091219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193059777_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_127342.known	chr7	+	913	8	FSM	ENSG00000129103.19	ENST00000452216.5	913	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.604407876221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCCCATCCCTCTG	-18	True	NA	NA	False	NA	NA	NA	56064264	56079729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_127345.known	chr7	+	1792	8	FSM	ENSG00000129103.19	ENST00000423763.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	141.156881894304	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATAAAATCTCCTGCAA	18	True	NA	-2	True	NA	NA	NA	56064300	56080638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_127346.known	chr7	+	1990	9	FSM	ENSG00000129103.19	ENST00000434526.8	1990	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_5	21.9715725427198	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	3	True	NA	30	True	AATAAA	-24	NA	56064285	56080670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_127347.known	chr7	+	2006	8	FSM	ENSG00000129103.19	ENST00000651586.1	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	136.936302784938	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	2528	False	NA	29	True	AATAAA	-23	NA	56064223	56080669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_127348.known	chr7	+	1683	6	FSM	ENSG00000129103.19	ENST00000436782.5	1683	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	169.505634124651	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGACATTTGTGTCTTT	-6	True	NA	25	True	AATAAA	-19	NA	56064276	56080665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_127349.known	chr7	+	1771	7	FSM	ENSG00000129103.19	ENST00000438133.5	1771	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	157.042103342455	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	25	True	NA	29	True	AATAAA	-23	NA	56064307	56080669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_127353.known	chr7	-	797	4	FSM	ENSG00000106153.13	ENST00000395422.4	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	1138	junction_1	65.2380257212004	16990	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGTTCATTTAGTCTA	13	True	NA	-14	True	AATAAA	-16	NA	56106476	56101572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_56101862_56102866_56103012_56104225_56104476_56106363
transcript_127354.nnic	chr7	-	783	4	Fusion	ENSG00000185290.4_ENSG00000146733.14	novel	633	4	NA	NA	20	826	multi-exon	FALSE	non_canonical	0	0	junction_1	104.180399094818	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATAGGCTGTGTGCCTTTTT	14	False	56116411	NA	False	AAGAAA	-11	NA	56116397	56020246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_56020622_56021117_56021232_56116014_56116129_56116217
transcript_127356.known	chr7	-	864	1	FSM	ENSG00000236976.1	ENST00000454924.1	864	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	NA	False	NA	NA	False	NA	NA	NA	64142401	64141537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64141500_64142400
transcript_127359.known	chr7	-	2993	4	FSM	ENSG00000173041.12	ENST00000309683.11	2993	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	7.11805216802087	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	2	True	NA	0	True	ATTAAA	-20	NA	64563071	64519877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64522501_64543706_64543803_64544305_64544433_64562924
transcript_127361.known	chr7	-	2159	4	FSM	ENSG00000173041.12	ENST00000447137.2	2159	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	22.647050335284	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTCTGTTATTAAT	0	True	NA	NA	False	NA	NA	NA	64563041	64524698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64526518_64543706_64543803_64544305_64544433_64562924
transcript_127362.nnic	chr7	-	949	4	NNC	ENSG00000173041.12	novel	566	3	NA	NA	-31	-2639	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	24.4585817704589	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTATTGTTTTATGTG	NA	False	NA	NA	False	AATAAA	-17	NA	64563106	64527337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_64527882_64543706_64543803_64544305_64544433_64562924
transcript_127363.nnic	chr7	-	1377	3	NNC	ENSG00000173041.12	novel	2993	4	NA	NA	-24	-15136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACCTAAACAAACAA	NA	False	NA	NA	False	AAAACA	-11	NA	64563099	64559481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_64560189_64560778_64561274_64562924
transcript_127364.known	chr7	-	769	3	FSM	ENSG00000173041.12	ENST00000476563.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	26	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTCAATCCTTAGTAA	67	False	NA	NA	False	NA	NA	NA	64563022	64521925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64522501_64543706_64543803_64562924
transcript_127365.nnic	chr7	-	2805	2	NIC	ENSG00000173041.12	novel	2993	4	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	NA	False	NA	0	True	ATTAAA	-20	NA	64563106	64519877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_64522501_64562924
transcript_12737.known	chr1	+	1474	7	FSM	ENSG00000116747.13	ENST00000460715.2	1474	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.1927709172242	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATTAAATTATGAATGA	-7	True	NA	NA	False	NA	NA	NA	193059622	193085235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193059777_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_127372.known	chr7	+	1711	5	FSM	ENSG00000196247.13	ENST00000684016.1	1711	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	47.9759054109456	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTAGCTGGGATTACAGG	-8	True	NA	NA	False	NA	NA	NA	64666129	64698545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64666286_64679176_64679337_64691247_64691375_64691864_64691961_64697373
transcript_127373.known	chr7	+	5174	5	FSM	ENSG00000196247.13	ENST00000344930.7	5174	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	46.9807141282463	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGATTATGCGTGAAC	28	False	NA	7	True	AATAAA	-19	NA	64666197	64711026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64666286_64679176_64679337_64691247_64691375_64691864_64691961_64706323
transcript_127377.known	chr7	+	400	4	FSM	ENSG00000196247.13	ENST00000684494.1	400	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.6823829464998	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCTGATCTCTACAACC	51	False	NA	NA	False	GATAAA	-8	NA	64666220	64684390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64666286_64679176_64679337_64684086_64684206_64684334
transcript_127380.known	chr7	+	5664	4	FSM	ENSG00000196247.13	ENST00000620827.6	5630	4	-29	-5	5	5	multi-exon	FALSE	canonical	3	88	junction_1	18.4028983224563	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTCTTTGAACATG	NA	False	NA	NA	False	AATAAA	-17	NA	64666103	64711582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64666286_64691247_64691375_64691864_64691961_64706323
transcript_127395.known	chr7	+	842	5	FSM	ENSG00000197008.10	ENST00000494380.5	842	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	24.7626230436115	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTAGAGAGAATTT	-1	True	NA	71	True	CATAAA	-4	NA	64794424	64831803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64830939_64831077_64831450
transcript_12740.known	chr1	-	682	4	FSM	ENSG00000023572.10	ENST00000367439.8	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	8.33999733546454	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCACTTGCCAATTC	0	True	NA	-25	True	AATAAA	-17	NA	193105414	193096469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193096760_193097583_193097761_193101140_193101205_193105263
transcript_127405.known	chr7	+	2230	4	FSM	ENSG00000197008.10	ENST00000440598.2	2230	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	21.249836600679	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAAATGTGAAAATGAT	2	True	NA	NA	False	ACTAAA	-29	NA	64794427	64833327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814917_64815045_64815571_64815654_64831450
transcript_127406.known	chr7	+	2579	4	FSM	ENSG00000197008.10	ENST00000307355.12	2579	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	15.7550697307953	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTTTGTTTTAGT	2	True	NA	19	True	AATAAA	-33	NA	64794427	64833680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64831450
transcript_127408.known	chr7	+	2679	4	FSM	ENSG00000197008.10	ENST00000359735.7	2679	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	27.3130005674953	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGGTTTTGTTTTAGTG	NA	False	NA	20	True	AATAAA	-34	NA	64794387	64833681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814917_64815045_64830939_64831077_64831450
transcript_12741.known	chr1	-	1131	4	FSM	ENSG00000023572.10	ENST00000367440.3	1131	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.934695568042	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCACTTGCCAATTCTT	NA	False	NA	-23	True	AATAAA	-19	NA	193106114	193096467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193096760_193097583_193097761_193101140_193101205_193105516
transcript_127413.known	chr7	+	2574	4	FSM	ENSG00000197008.10	ENST00000437743.1	2574	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	16.2685791225499	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAACTCAGCAT	2	True	NA	3	True	AATAAA	-17	NA	64794427	64833664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814058_64814148_64814917_64815045_64831450
transcript_127416.known	chr7	+	1066	3	FSM	ENSG00000197008.10	ENST00000440155.6	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	18.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTACAAATGTGAAGAATGT	-1	True	NA	NA	False	AAGAAA	-20	NA	64794424	64832242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814917_64815045_64831450
transcript_127418.nnic	chr7	+	623	3	NNC	ENSG00000197008.10	novel	1066	3	NA	NA	5	-32298	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	3.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTCATATCTGACT	NA	False	NA	5	True	CATAAA	-14	NA	64794392	64799505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_64794572_64796979_64797109_64799190
transcript_127427.known	chr7	+	2308	2	FSM	ENSG00000197008.10	ENST00000430838.2	2308	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	23	False	NA	15	True	AATAAA	-29	NA	64794489	64833676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64831450
transcript_127429.nnic	chr7	+	499	2	NNC	ENSG00000197008.10	novel	2679	4	NA	NA	0	-32298	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTCATATCTGACT	NA	False	NA	5	True	CATAAA	-14	NA	64794387	64799505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_64794572_64799190
transcript_127433.known	chr7	+	3757	5	FSM	ENSG00000198039.12	ENST00000395375.3	3757	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	26.5377090194312	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTCCTGAATATTT	13	True	NA	14	True	AATAAA	-31	NA	64903287	64930966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196_64918293_64927653
transcript_127437.nic	chr7	+	894	4	ISM	ENSG00000198039.12	ENST00000395375.3	3757	5	-72	12296	-37	-5761	5prime_fragment	FALSE	canonical	3	51	junction_2	29.4882274061286	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	64903215	64918670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196
transcript_127439.known	chr7	-	1062	3	FSM	ENSG00000189316.3	ENST00000340779.3	1062	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTAATTCTCACCATCA	NA	False	NA	NA	False	AATAAA	-34	NA	64890100	64888526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64888818_64889065_64889188_64889451
transcript_127442.nic	chr7	-	669	2	ISM	ENSG00000189316.3	ENST00000340779.3	1062	3	657	0	657	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTAATTCTCACCATCA	NA	False	NA	NA	False	AATAAA	-34	NA	64889443	64888526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_64888818_64889065
transcript_127443.known	chr7	+	2000	4	FSM	ENSG00000198039.12	ENST00000476120.2	3698	4	-26	1724	-6	133	multi-exon	FALSE	canonical	3	47	junction_1	28.0832096931007	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	64903246	64929257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64903420_64917580_64917708_64918196_64918293_64927653
transcript_127444.known	chr7	+	752	3	FSM	ENSG00000286342.2	ENST00000653683.2	933	3	98	83	28	-36	multi-exon	FALSE	canonical	3	4	junction_1	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGGGTAAATC	67	False	NA	-78	True	NA	NA	NA	64947837	64950641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64947858_64949115_64949410_64950203
transcript_127446.nic	chr7	-	714	4	NIC	ENSG00000152926.16	novel	9084	4	NA	NA	-39	688	combination_of_known_junctions	FALSE	canonical	3	42	junction_3	20.237478982214	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTCGCAAAACATTTTG	-3	True	NA	NA	False	AATAAA	-16	NA	65006723	64979234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_64979537_64981386_64981483_64981983_64982117_65006540
transcript_127449.known	chr7	-	3206	2	FSM	ENSG00000213462.5	ENST00000394323.3	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTCTCCGGCCTCCTG	2	True	NA	-1	True	AATAAA	-19	NA	65006687	64990355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64993415_65006540
transcript_12745.known	chr1	+	592	2	FSM	ENSG00000116747.13	ENST00000469214.2	592	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAACAAATGTCGTGTA	-35	True	NA	NA	False	NA	NA	NA	193059594	193060283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193059777_193059873
transcript_127451.known	chr7	-	1729	2	FSM	ENSG00000213462.5	ENST00000528878.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCGTAAAATTTCCTT	NA	False	NA	NA	False	AATAAA	-34	NA	65006743	65003668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65005195_65006540
transcript_127452.nnic	chr7	-	366	2	NNC	ENSG00000213462.5	novel	358	2	NA	NA	13	10	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGCTATGTTTTGTAGTT	NA	False	NA	-7	True	ATTAAA	-38	NA	65006730	65006073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_65006250_65006540
transcript_127453.known	chr7	-	358	2	FSM	ENSG00000213462.5	ENST00000535538.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAGCACCAAGCTATG	0	True	NA	-17	True	ATTAAA	-28	NA	65006659	65006083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65006323_65006540
transcript_127454.known	chr7	-	1837	3	FSM	ENSG00000152926.16	ENST00000487644.1	1837	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	24.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTGGGTGTGTTATT	5	True	NA	NA	False	AATAAA	-10	NA	65006684	64979922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64981483_64981983_64982117_65006540
transcript_127456.known	chr7	+	2238	11	FSM	ENSG00000234585.6	ENST00000426828.5	2238	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9.76933979345585	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	-2	True	NA	NA	False	AATAAA	-18	NA	65038359	65074713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65038566_65064998_65065134_65066252_65066427_65066944_65067051_65068455_65068611_65068708_65068791_65069660_65069758_65070345_65070485_65070908_65071043_65073440_65073515_65073777
transcript_127461.nnic	chr7	+	1492	6	NNC	ENSG00000282381.2	novel	1130	4	NA	NA	-12	32757	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	4.57820925690384	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGACTGCATATGGGAA	-36	True	NA	NA	False	AATAAA	-18	NA	65269346	65350695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_65269539_65303528_65303803_65313569_65313754_65317446_65317567_65338531_65338617_65350058
transcript_127468.nnic	chr7	+	799	3	FSM	ENSG00000282381.2	ENST00000685802.1	757	3	-42	0	-12	0	multi-exon	FALSE	canonical	3	15	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCGAGTGTTTGGGGG	-36	True	NA	NA	False	NA	NA	NA	65269346	65313902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65269539_65303528_65303803_65313569
transcript_12747.known	chr1	-	5327	11	FSM	ENSG00000116750.14	ENST00000367455.8	5327	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	102.649111053141	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCATGTAGGTGTATTTT	-2	True	NA	NA	False	AATAAA	-21	NA	193059496	193012249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_127471.known	chr7	+	3165	4	FSM	ENSG00000146757.14	ENST00000328747.12	3165	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	6.94422221866655	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTGTATTCGATGAAG	1	True	NA	4	True	ATTAAA	-21	NA	65373854	65401136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65374001_65387901_65388029_65388805_65388902_65398340
transcript_127473.known	chr7	+	3124	3	FSM	ENSG00000146757.14	ENST00000357512.3	3124	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	45	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAGTGTATTCGATGAA	NA	False	NA	3	True	ATTAAA	-20	NA	65373798	65401135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65374001_65387901_65388029_65398340
transcript_127474.known	chr7	+	2957	3	FSM	ENSG00000146757.14	ENST00000450302.2	2957	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	43	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	-4	True	NA	28	True	AATAAA	-19	NA	65373880	65401081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65374001_65388805_65388902_65398340
transcript_127476.known	chr7	+	2947	2	FSM	ENSG00000146757.14	ENST00000431504.1	2947	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGCTAAGACTAGTGT	19	False	NA	-7	True	ATTAAA	-10	NA	65373838	65401125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65374001_65398340
transcript_12748.known	chr1	-	1507	11	FSM	ENSG00000116750.14	ENST00000367449.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	144.731648232168	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	669	False	NA	NA	False	AATAAA	-20	NA	193059409	193018404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193018821_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_12749.known	chr1	-	1346	12	FSM	ENSG00000116750.14	ENST00000367451.8	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	183.0230080826	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATGAAAGTGATATTAA	15	True	NA	-21	True	CATAAA	-38	NA	193059349	193016161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_127492.nnic	chr7	-	1310	4	NNC	ENSG00000272693.5	novel	1962	8	NA	NA	-8	-23409	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.4243305140746	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAACCCCATCAAAAAG	-12	True	NA	NA	False	AATAAA	-16	NA	65750946	65721270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_65722289_65726770_65726945_65727054_65727109_65750882
transcript_127497.nnic	chr7	+	2515	13	FSM	ENSG00000228409.7	ENST00000686689.1	1942	13	-24	-549	-1	0	multi-exon	FALSE	canonical	3	13	junction_3	27.5962960477589	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	-19	True	NA	NA	False	AATAAA	-18	NA	65751049	65764222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65752163_65752311_65754526_65754662_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
transcript_12750.known	chr1	-	1534	12	FSM	ENSG00000116750.14	ENST00000367448.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	178.673024227993	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	3	True	NA	NA	False	AATAAA	-20	NA	193059361	193018404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_127505.nic	chr7	+	1716	11	FSM	ENSG00000228409.7	ENST00000686363.1	2249	11	-19	552	-19	0	multi-exon	FALSE	canonical	3	24	junction_1	26.1091937830336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAATGGTTTAATTTT	565	False	NA	NA	False	ATTAAA	-18	NA	65751017	65763673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
transcript_127506.nic	chr7	+	2265	11	FSM	ENSG00000228409.7	ENST00000686363.1	2249	11	-19	3	-19	0	multi-exon	FALSE	canonical	3	24	junction_1	26.1091937830336	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	565	False	NA	NA	False	AATAAA	-18	NA	65751017	65764222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
transcript_127508.known	chr7	+	1317	11	FSM	ENSG00000228409.7	ENST00000688478.1	2258	11	73	868	0	18	multi-exon	FALSE	canonical	2	4	junction_2	29.7112773202365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	20	False	NA	NA	False	NA	NA	NA	65751141	65763354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65752163_65752311_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_12751.known	chr1	-	834	9	FSM	ENSG00000116750.14	ENST00000421683.1	834	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	172.439799277893	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTATTGAAGAAGAAGT	557	False	NA	-20	True	NA	NA	NA	193059521	193022967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059412
transcript_127511.known	chr7	+	1170	10	FSM	ENSG00000228409.7	ENST00000688735.1	2135	10	94	871	0	18	multi-exon	FALSE	canonical	3	24	junction_1	24.7720471698981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	20	False	NA	NA	False	NA	NA	NA	65751141	65763354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_12752.known	chr1	+	1791	8	FSM	ENSG00000116747.13	ENST00000367441.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	18.3358687176979	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	8874	False	NA	NA	False	AATGAA	-44	NA	193069015	193084866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_127523.nic	chr7	+	870	3	ISM	ENSG00000228409.7	ENST00000690636.1	1243	7	-36	6769	-19	-6432	5prime_fragment	FALSE	canonical	3	24	junction_1	20	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAATAAAGTGTGTTTT	565	False	NA	NA	False	AAAAAG	-1	NA	65751017	65756904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_65751279_65755779_65755953_65756468
transcript_127526.known	chr7	+	5895	3	FSM	ENSG00000196715.7	ENST00000648179.1	5895	3	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	9.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTTTCATGGAGCT	-5	True	NA	12	True	AATAAA	-20	NA	65873269	65959562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65873566_65948670_65948781_65954073
transcript_12753.known	chr1	+	3081	9	FSM	ENSG00000116747.13	ENST00000367446.7	3081	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	30.7812341370518	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTTGCTCATAATTTT	337	False	NA	9	True	ATTAAA	-20	NA	193060033	193085985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193060223_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_127530.known	chr7	+	1541	2	FSM	ENSG00000196715.7	ENST00000434382.2	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGACATGCTGCCCAGT	18	True	NA	NA	False	NA	NA	NA	65873368	65955417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65873566_65954073
transcript_127532.known	chr7	-	2199	12	FSM	ENSG00000169919.17	ENST00000304895.9	2199	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	91.7428133515258	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	10	True	NA	-12	True	AATAAA	-29	NA	65982213	65960683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_127533.known	chr7	-	1742	10	FSM	ENSG00000169919.17	ENST00000421103.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_7	129.052960704769	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGGCTACTGAAAAGCA	12	True	NA	-29	True	AATAAA	-35	NA	65982211	65960700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65979833_65979912_65980223_65980410_65981973
transcript_127534.known	chr7	-	1983	11	FSM	ENSG00000169919.17	ENST00000447929.5	1983	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	125.013759242733	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	0	True	NA	-26	True	AATAAA	-38	NA	65982196	65960697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65980223_65980410_65981973
transcript_127535.known	chr7	+	1388	15	FSM	ENSG00000126522.17	ENST00000362000.10	1388	15	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	58.184085067156	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTTTCCTGCC	7	True	NA	10	True	AATAAA	-17	NA	66075936	66092955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_12754.known	chr1	-	5612	5	FSM	ENSG00000023572.10	ENST00000608166.2	5612	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	71.5240344220039	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTCTGTATTTCA	-19	True	NA	-14	True	ATTAAA	-14	NA	193105433	193090865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193095250_193095942_193096760_193097583_193097761_193101140_193101205_193105263
transcript_127553.known	chr7	+	2774	6	FSM	ENSG00000241258.7	ENST00000395326.8	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	4.19523539268061	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	7	True	NA	18	True	AATAAA	-24	NA	66114846	66154568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134375_66145442_66145501_66152207
transcript_12756.known	chr1	+	5869	17	FSM	ENSG00000134371.14	ENST00000367435.5	5869	17	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_8	36.754623433658	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTTCATGCTATGTCG	9	True	NA	31	True	AATAAA	-28	NA	193122030	193254815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992_193233155_193236255_193236357_193249729_193249872_193250675
transcript_127560.nnic	chr7	+	603	5	NNC	ENSG00000241258.7	novel	2774	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	27.3986769753578	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	-22	True	NA	18	True	AATAAA	-24	NA	66114817	66154568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134320_66154294
transcript_127564.known	chr7	+	1393	5	FSM	ENSG00000241258.7	ENST00000338592.5	1393	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	27.5816968296006	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGGTGATGGCAC	10	True	NA	NA	False	AATACA	-4	NA	66114849	66153289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66114971_66127703_66127741_66134279_66134375_66145442_66145501_66152207
transcript_127574.known	chr7	+	492	3	FSM	ENSG00000241258.7	ENST00000398684.6	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	35	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTTGGGGAGA	1	True	NA	NA	False	AAAAAG	-3	NA	66114840	66152511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66114971_66145442_66145501_66152207
transcript_127577.known	chr7	+	1436	16	FSM	ENSG00000126522.17	ENST00000673518.1	1436	16	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_7	54.1509823446342	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTTTCCTG	-6	True	NA	8	True	AATAAA	-15	NA	66075821	66092953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_127578.known	chr7	+	1608	16	FSM	ENSG00000126522.17	ENST00000395332.8	1608	16	0	0	0	0	multi-exon	FALSE	canonical	2	139	junction_13	33.0019528041734	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTGGGCGCGAGAG	-5	True	NA	-13	True	NA	NA	NA	66075888	66092932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_127579.known	chr7	+	1974	15	FSM	ENSG00000126522.17	ENST00000380839.9	1974	15	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_6	52.7078974061724	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATGGAAGCGGAG	19	False	NA	-5	True	AATAAA	-11	NA	66075846	66093334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_127580.known	chr7	+	1478	15	FSM	ENSG00000126522.17	ENST00000395331.4	1478	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_11	58.5779177589951	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACCTGCCCCCTAATA	14	False	NA	-28	True	NA	NA	NA	66075943	66092917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_127581.known	chr7	+	1981	6	FSM	ENSG00000169902.15	ENST00000304842.6	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	25.0966133173383	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTAGTTACATGTTTT	-1	True	NA	18	True	AATAAA	-19	NA	66205333	66360443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66205523_66240324_66241271_66286510_66286710_66352504_66352556_66356824_66356872_66359894
transcript_127582.known	chr7	-	682	2	FSM	ENSG00000179406.9	ENST00000412091.1	682	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCTATGCTCCTGTAA	-9	True	NA	NA	False	AATACA	-12	NA	66493566	66492008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66492340_66493215
transcript_127583.known	chr7	-	4621	23	FSM	ENSG00000179406.9	ENST00000638517.1	4621	23	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	7.4744744694889	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCATGCACCTGTA	1966	False	NA	NA	False	AATAAA	-42	NA	66491616	66388324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66390251_66395878_66395957_66399691_66399796_66400321_66400438_66400922_66401028_66402456_66402546_66407289_66407365_66409059_66409245_66411614_66411703_66427948_66428041_66429678_66429758_66429883_66430018_66439134_66439305_66450070_66450237_66467681_66467720_66476258_66476328_66479008_66479097_66480393_66480449_66481540_66481600_66485094_66485154_66487948_66488039_66489937_66490108_66491030
transcript_127585.known	chr7	+	454	2	FSM	ENSG00000237310.3	ENST00000452565.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTCTGGTTTTTGGGG	58	False	NA	22	True	ATTAAA	-23	NA	66493785	66495472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66494022_66495254
transcript_127586.known	chr7	+	540	2	FSM	ENSG00000237310.3	ENST00000445681.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGGTTTTTGGGGTT	NA	False	NA	24	True	ATTAAA	-25	NA	66493705	66495474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66494026_66495254
transcript_127587.known	chr7	+	926	2	FSM	ENSG00000237310.3	ENST00000654121.1	926	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGGTTTTTGGGGTT	NA	False	NA	24	True	ATTAAA	-25	NA	66493658	66495474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66494365_66495254
transcript_127588.known	chr7	+	713	2	FSM	ENSG00000237310.3	ENST00000669130.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTCTTCTGGTTTTTGG	-12	True	NA	20	True	ATTAAA	-21	NA	66493715	66495470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66494213_66495254
transcript_127594.known	chr7	-	2103	6	FSM	ENSG00000229180.8	ENST00000638711.1	2103	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	42.5910788780937	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGAAAGATAGGCACAA	-8	True	NA	80	True	NA	NA	NA	66592397	66553484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66554838_66573384_66573551_66576754_66576930_66578528_66578728_66588511_66588581_66592256
transcript_127612.known	chr7	-	563	3	FSM	ENSG00000229180.8	ENST00000639153.2	635	3	0	72	0	-72	multi-exon	FALSE	canonical	2	5	junction_1	11	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTGTATTCTTCTAGT	3	True	NA	-10	True	TATAAA	-15	NA	66592386	66584102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66584467_66588511_66588581_66592256
transcript_127615.nnic	chr7	-	588	2	NIC	ENSG00000229180.8	novel	635	3	NA	NA	-7	4	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTGCAATGTGTGTGT	-15	True	NA	1	True	AATATA	-21	NA	66592404	66584026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_66584467_66592256
transcript_127616.nnic	chr7	-	522	2	NIC	ENSG00000229180.8	novel	635	3	NA	NA	-7	-62	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTAGTTTGCTTAATG	-15	True	NA	0	True	TATAAA	-25	NA	66592404	66584092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_66584467_66592256
transcript_127617.known	chr7	-	395	1	FSM	ENSG00000275400.1	ENST00000622243.1	395	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAATGTTAACATAAT	2516	False	NA	-49	True	NA	NA	NA	66554199	66553804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66553800_66554200
transcript_127618.known	chr7	-	1819	6	FSM	ENSG00000229180.8	ENST00000639011.1	1819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.9830747194991	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGGCCCTTTACCATTC	3	True	NA	1	True	AATAAA	-22	NA	66592386	66530296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66531400_66531790_66531872_66545600_66545687_66554584_66554838_66573384_66573551_66592256
transcript_127619.known	chr7	-	370	1	FSM	ENSG00000225573.4	ENST00000433398.1	370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	594	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCGCGTTGTCAATAAAG	NA	False	NA	NA	False	NA	NA	NA	66607107	66606737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66606700_66607100
transcript_127620.known	chr7	+	4139	13	FSM	ENSG00000284461.2	ENST00000503687.2	4139	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.575291210971	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGACTTTTTTGGGT	3	True	NA	30	True	AATAAA	-20	NA	66628957	66811189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66629209_66638252_66638432_66638855_66638930_66771882_66772079_66773690_66773811_66775226_66775394_66783674_66783842_66795510_66795593_66796775_66796893_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_127621.known	chr7	+	508	4	FSM	ENSG00000226824.8	ENST00000439360.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCAGCTCCCTCCCCAGT	1	True	NA	NA	False	NA	NA	NA	66654550	66669298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66654627_66667397_66667611_66668763_66668914_66669229
transcript_127622.nic	chr7	+	1102	4	NIC	ENSG00000226824.8	novel	1172	5	NA	NA	0	15	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	66654512	66670428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_66654627_66668763_66668914_66669229_66669382_66669742
transcript_127624.nic	chr7	+	637	3	NIC	ENSG00000226824.8	novel	508	4	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGTAGCTTTGGCATG	NA	False	NA	NA	False	AATAAA	-19	NA	66654512	66669602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_66654627_66668763_66668914_66669229
transcript_127625.known	chr7	+	304	3	FSM	ENSG00000226824.8	ENST00000428557.1	304	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCGGGCCACCACCAAGA	21	False	NA	NA	False	AAAACA	-38	NA	66654585	66669855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66654627_66668763_66668914_66669742
transcript_12763.nic	chr1	-	1943	9	ISM	ENSG00000162687.19	ENST00000609185.5	3622	27	-506	201150	-305	63253	5prime_fragment	TRUE	canonical	2	14	junction_8	6.84539078504653	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGAACATGGTATGTAAA	NA	False	NA	NA	False	NA	NA	NA	196608865	196429008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
transcript_127630.known	chr7	+	3733	9	FSM	ENSG00000154710.18	ENST00000284957.9	3733	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	22.1468818346963	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGGTTCTTTCTTAG	0	True	NA	17	True	AATAAA	-29	NA	66740732	66811464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66740793_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_127642.nnic	chr7	+	1152	4	Fusion	ENSG00000226824.8_ENSG00000154710.18	novel	508	4	NA	NA	-18	30947	multi-exon	FALSE	canonical	0	0	junction_2	3.74165738677394	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATAGTCATGTCTTTTTT	NA	False	NA	NA	False	AATAAA	-32	NA	66654494	66716639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_66654627_66700768_66700854_66712166_66712225_66715762
transcript_127652.known	chr7	+	2654	10	FSM	ENSG00000154710.18	ENST00000607882.5	2654	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.7186410345476	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTTTGGAATAATTTTA	-1	True	NA	NA	False	ATTAAA	-15	NA	66682163	66809662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66682259_66712166_66712225_66739995_66740793_66771882_66772079_66775226_66775394_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_127654.nnic	chr7	+	481	2	NIC	ENSG00000154710.18	novel	2654	10	NA	NA	-53	-86343	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCTGGTTTTCAG	-16	True	NA	23	True	AATAAA	-18	NA	66682110	66685692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_66682259_66685359
transcript_127655.known	chr7	+	2281	10	FSM	ENSG00000154710.18	ENST00000450873.6	2281	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	62.3451167313601	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAGCACCATTTTATT	0	True	NA	9	True	AATGAA	-16	NA	66740732	66809817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66740793_66768830_66769026_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_127656.known	chr7	+	553	4	FSM	ENSG00000154710.18	ENST00000442563.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	6.0184900284226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGCAGAAGCAGATTCAG	0	True	NA	NA	False	NA	NA	NA	66740732	66772035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66740793_66768830_66769026_66770322_66770468_66771882
transcript_127657.known	chr7	-	557	1	FSM	ENSG00000272831.1	ENST00000607978.1	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGTATGGCGTAACGT	228	False	NA	82	True	AGTAAA	-24	NA	66740385	66739828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66739800_66740400
transcript_127658.known	chr7	-	1153	6	FSM	ENSG00000230583.8	ENST00000650401.2	1159	6	6	0	4	0	multi-exon	FALSE	canonical	0	0	junction_3	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGTGTGTGACTGTC	-5	True	NA	NA	False	CATAAA	-43	NA	66844882	66831852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66832481_66832984_66833023_66836734_66836801_66839539_66839630_66839896_66839935_66844589
transcript_127660.known	chr7	+	3330	16	FSM	ENSG00000198874.14	ENST00000359626.10	3330	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_10	20.5875906528396	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGCATGAGTTTTTTA	-3	True	NA	13	True	AATAAA	-18	NA	66996832	67239514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67055834_67055888_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_127662.nic	chr7	+	1172	7	ISM	ENSG00000198874.14	ENST00000359626.10	3330	16	-43	214493	-30	7140	5prime_fragment	FALSE	canonical	3	106	junction_3	14.2594997574716	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCGTTACTTTGGGAAA	1385	False	NA	NA	False	AAGAAA	-6	NA	66996789	67025021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899
transcript_12767.nnic	chr1	+	966	4	NNC	ENSG00000116785.15	novel	785	2	NA	NA	-3317	73	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.09120616516523	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTATCAATGAATTAGT	7243	False	NA	NA	False	AATAAA	-19	NA	196786442	196793748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_196786611_196788215_196788399_196790044_196790228_196793316
transcript_127670.known	chr7	-	1531	5	FSM	ENSG00000126524.11	ENST00000414306.5	1531	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	118.165932061656	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGTATGTAATCAAT	21	True	NA	27	True	AATATA	-13	NA	66995576	66987743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994219_66994342_66995289
transcript_127671.known	chr7	-	841	4	FSM	ENSG00000126524.11	ENST00000490953.5	841	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	124.046586230962	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGTTGTAAACGTCAGA	31	False	NA	NA	False	AATAAA	-16	NA	66995566	66991060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66991302_66993216_66993418_66994219_66994342_66995289
transcript_127678.nnic	chr7	-	931	6	FSM	ENSG00000067601.9	ENST00000685318.1	943	6	10	2	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	12.0266371026983	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGGACTCAGTGTCTCT	NA	False	NA	-7	True	AATAAA	-37	NA	67302468	67192819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_67193160_67292462_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_127682.known	chr7	-	721	6	FSM	ENSG00000067601.9	ENST00000688434.1	933	6	57	155	0	-1	multi-exon	FALSE	canonical	1	3	junction_1	10.8627804912002	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	0	True	NA	NA	False	AATAAA	-18	NA	67302419	67287540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_67287720_67292462_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_127683.nic	chr7	-	2357	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	6	-1731	0	1731	multi-exon	FALSE	canonical	3	26	junction_4	3.11247489949718	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAGAAAGAAAGTATC	NA	False	NA	NA	False	NA	NA	NA	67302468	67290696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_127686.nic	chr7	-	1063	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	-435	4	-424	0	multi-exon	FALSE	canonical	3	26	junction_4	3.11247489949718	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	67302909	67292431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_12769.nic	chr1	-	1493	8	ISM	ENSG00000066279.19	ENST00000367408.6	3924	18	36766	7	36766	0	3prime_fragment	FALSE	canonical	3	123	junction_5	15.3410214384672	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTATTCCTGTCTAT	NA	False	NA	39	True	AATAAA	-19	NA	197093208	197084127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051
transcript_127705.known	chr7	+	2143	5	FSM	ENSG00000106610.16	ENST00000416602.6	2143	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	21.4592637338749	927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTCAAACTTATCTTTTTT	NA	False	NA	NA	False	ACTAAA	-16	NA	67302620	67321526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_67302886_67305986_67306084_67308934_67309140_67309563_67309716_67320102
transcript_12771.nic	chr1	-	905	3	ISM	ENSG00000066279.19	ENST00000679766.1	2434	4	-15	4003	0	-4003	5prime_fragment	FALSE	canonical	3	50	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCTTTCAATGAATGC	-21	True	NA	-28	True	AATAAA	-20	NA	197146669	197143578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_197143811_197143956_197144101_197146140
transcript_127716.known	chr7	-	9243	6	FSM	ENSG00000183166.11	ENST00000329008.9	9243	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	14.0939703419583	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGATTCCATTCATTAT	1431	False	NA	-6	True	AATAAA	-19	NA	72336995	71779490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_71787903_71810335_71810493_72023656_72023770_72106150_72106295_72278685_72278811_72336703
transcript_12772.known	chr1	-	8595	11	FSM	ENSG00000177888.8	ENST00000367405.5	8595	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	3.19374388453426	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATATCTAGGTTTTA	-4	True	NA	NA	False	AATAAA	-22	NA	197201293	197153681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_197160015_197172159_197172249_197175009_197175116_197176563_197176671_197178416_197178513_197180987_197181118_197188291_197188440_197190761_197190832_197191691_197191900_197199353_197200591_197201222
transcript_127725.known	chr7	-	550	4	FSM	ENSG00000183166.11	ENST00000446128.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	29.6010510323911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAAGAATATTTTTTT	675	False	NA	NA	False	NA	NA	NA	72337751	72023656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72023770_72106150_72106295_72278685_72278811_72337583
transcript_127726.known	chr7	-	3117	14	FSM	ENSG00000277149.5	ENST00000620995.5	3117	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	37.4717250405528	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-15	True	NA	-8	True	AATAAA	-18	NA	72828200	72574512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72744483_72744602_72777415_72777534_72802399_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
transcript_127731.nnic	chr7	-	2053	7	NNC	ENSG00000277149.5	novel	3117	14	NA	NA	92087	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_3	14.613540144522	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-1	True	NA	-8	True	AATAAA	-18	NA	72736087	72574512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72735944
transcript_127733.nic	chr7	-	971	6	ISM	ENSG00000277149.5	ENST00000620995.5	3117	14	-1	227888	-1	-73557	5prime_fragment	FALSE	canonical	3	8	junction_2	6.24819974072532	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTACCATTACTTTGGGAAA	-16	True	NA	NA	False	AAGAAA	-6	NA	72828201	72802400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
transcript_127734.nnic	chr7	+	1639	5	NNC	ENSG00000225648.6	novel	1621	5	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	38.6417843790889	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	72829364	72837376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_72829784_72830755_72830814_72831601_72831799_72833763_72833929_72836576
transcript_127735.known	chr7	+	737	5	FSM	ENSG00000225648.6	ENST00000453858.2	1621	5	189	695	149	63	multi-exon	FALSE	canonical	3	32	junction_1	28.8389927008556	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCATCAGTCTCTTC	183	False	NA	NA	False	NA	NA	NA	72829655	72836701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763_72833929_72836576
transcript_127736.nic	chr7	+	1570	4	FSM	ENSG00000225648.6	ENST00000685034.1	1489	4	-84	3	-49	0	multi-exon	FALSE	canonical	3	46	junction_1	24.3903441732356	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	NA	False	NA	NA	False	AATAAA	-22	NA	72829375	72837376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72831601_72831799_72833763_72833929_72836576
transcript_127737.known	chr7	+	839	4	FSM	ENSG00000225648.6	ENST00000437201.5	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	30.1367254727885	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTGTAAACAGTCAGAT	34	False	NA	NA	False	AATAAA	-18	NA	72829506	72834006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763
transcript_12774.known	chr1	-	2141	3	FSM	ENSG00000213047.13	ENST00000468589.5	2141	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATGTATCTTTTA	-7	True	NA	NA	False	AATAAA	-17	NA	197775426	197734008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_197735797_197772867_197772933_197775138
transcript_127741.known	chr7	+	733	3	FSM	ENSG00000225648.6	ENST00000415772.5	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	28.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATTGTAAACAGTCAGA	17	True	NA	NA	False	AATAAA	-17	NA	72829489	72834005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72831601_72831799_72833763
transcript_127743.known	chr7	+	618	3	FSM	ENSG00000225648.6	ENST00000423945.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	20	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAGGTTCTTTGGAAG	NA	False	NA	NA	False	AATAAA	-13	NA	72829424	72836638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72831601_72831799_72836576
transcript_127745.known	chr7	-	1647	12	FSM	ENSG00000106133.18	ENST00000485741.6	1647	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	172.318607466921	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	10	False	NA	-8	True	AATAAA	-18	NA	72954720	72948297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72948981_72949052_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_12775.known	chr1	+	600	3	FSM	ENSG00000203724.11	ENST00000367393.8	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACAAATGTTTGTGTGT	0	True	NA	NA	False	AATAAA	-9	NA	197902629	197907362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_197902914_197905795_197905898_197907148
transcript_127751.known	chr7	-	1789	11	FSM	ENSG00000106133.18	ENST00000388955.8	1789	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	170.414905451372	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954790	72948297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_12777.known	chr1	+	394	3	FSM	ENSG00000203724.11	ENST00000436652.1	394	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTTTGTGTGTTTCTG	51	False	NA	NA	False	AATAAA	-14	NA	197902777	197907367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_197902851_197905795_197905898_197907148
transcript_127778.known	chr7	-	1180	7	FSM	ENSG00000106133.18	ENST00000444583.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	182.059514078959	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	17	False	NA	-3	True	AATAAA	-23	NA	72954713	72948292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_127779.nnic	chr7	-	1250	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	18	junction_2	196.54381756296	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954782	72948297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72948809_72948891_72948981_72949052_72949103_72949304_72949492_72949845_72949962_72950057_72950197_72954624
transcript_127781.nnic	chr7	-	1322	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	66	junction_3	172.328900652212	100	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954782	72948297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_127792.nnic	chr7	-	1402	6	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	8	0	intron_retention	FALSE	canonical	3	148	junction_2	155.494565821446	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954782	72948297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954624
transcript_127797.nnic	chr7	-	1322	6	NNC	ENSG00000106133.18	novel	1789	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	56	junction_2	179.34369238978	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954782	72948297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72948809_72948891_72949103_72949304_72949492_72949845_72949962_72950057_72950197_72954624
transcript_127798.nic	chr7	-	1314	6	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	89	junction_2	170.259331609166	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954782	72948297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_127802.known	chr7	-	1776	5	FSM	ENSG00000106133.18	ENST00000602348.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	214.390414897681	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATTTAGA	24	False	NA	NA	False	AATAAA	-25	NA	72954706	72947580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72948809_72948891_72949103_72949845_72949962_72950057_72950197_72954624
transcript_127803.nic	chr7	-	1524	5	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	8	0	intron_retention	FALSE	canonical	3	171	junction_4	141.68869926709	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-8	True	AATAAA	-18	NA	72954782	72948297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72950197_72954624
transcript_127809.known	chr7	-	708	1	FSM	ENSG00000272843.1	ENST00000608799.1	708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGTCTGCCAATACACT	NA	False	NA	NA	False	AATAAA	-16	NA	72925125	72924417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72924400_72925100
transcript_127810.known	chr7	-	1350	5	FSM	ENSG00000155428.12	ENST00000285805.3	1350	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.20156211871642	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCATGCGCCTATA	NA	False	NA	NA	False	AATAAA	-14	NA	72969466	72959484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72959909_72960020_72960252_72961349_72961446_72965758_72966176_72969284
transcript_12782.known	chr1	-	678	5	FSM	ENSG00000151418.12	ENST00000309309.11	678	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTATATCTTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	198540945	198523221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_198523565_198529080_198529182_198536678_198536725_198540568_198540686_198540874
transcript_12783.known	chr1	-	630	4	FSM	ENSG00000151418.12	ENST00000281087.6	630	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGCTATATCTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	198540945	198523223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_198523565_198529080_198529182_198540568_198540686_198540874
transcript_127830.known	chr7	-	2137	8	FSM	ENSG00000174353.17	ENST00000428423.5	2137	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	29.1204395571221	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAAATTAGGCCGGGCG	23	False	NA	NA	False	NA	NA	NA	73005918	72997058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72998365_72998675_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_127832.known	chr7	-	1262	8	FSM	ENSG00000174353.17	ENST00000423834.6	1262	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	36.3295573148625	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	19	False	NA	NA	False	NA	NA	NA	73005922	72998489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005575
transcript_127833.nic	chr7	-	1166	8	NIC	ENSG00000174353.17	novel	1262	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_5	28.5478474116129	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-2	False	NA	NA	False	NA	NA	NA	73005943	72998489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_127846.nic	chr7	-	1042	7	ISM	ENSG00000174353.17	ENST00000428423.5	2137	8	-25	1431	-21	0	5prime_fragment	FALSE	canonical	3	61	junction_4	21.0508643264092	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-2	False	NA	NA	False	NA	NA	NA	73005943	72998489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_12785.known	chr1	-	556	3	FSM	ENSG00000151418.12	ENST00000367382.6	556	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTATATCTTTTCTA	7	True	NA	NA	False	ATTAAA	-16	NA	198540680	198523221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_198523565_198529080_198529182_198540568
transcript_127850.known	chr7	-	897	7	FSM	ENSG00000174353.17	ENST00000569650.1	897	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	43.5025542034284	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACAGATGGAG	156	False	NA	NA	False	NA	NA	NA	73005785	72998492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72998791_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_127851.nic	chr7	-	1425	7	NIC	ENSG00000174353.17	novel	897	7	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	40	junction_4	30.5705013952267	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACAGATGG	-2	False	NA	NA	False	NA	NA	NA	73005943	72998494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_127855.known	chr7	-	1716	6	FSM	ENSG00000174353.17	ENST00000448173.5	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	33.1746891469988	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	26	False	NA	NA	False	NA	NA	NA	73005915	72998483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_12786.known	chr1	-	449	4	FSM	ENSG00000151418.12	ENST00000489986.1	449	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTATGGCTTCGTATTT	13	False	NA	NA	False	AAAAAG	-20	NA	198540674	198523340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_198523565_198529080_198529182_198536678_198536697_198540568
transcript_127864.nic	chr7	-	1301	6	NIC	ENSG00000174353.17	novel	2137	8	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	61	junction_3	21.3410402745508	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACAGATGG	-2	False	NA	NA	False	NA	NA	NA	73005943	72998494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72999163_72999470_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_127866.nic	chr7	-	1620	5	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-21	0	intron_retention	FALSE	canonical	3	61	junction_2	23.847169643377	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-2	False	NA	NA	False	NA	NA	NA	73005943	72998483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72999551_72999760_72999860_73003020_73003138_73003644_73003731_73005692
transcript_127874.nic	chr7	-	1819	4	NIC	ENSG00000174353.17	novel	1716	6	NA	NA	-21	-2	intron_retention	FALSE	canonical	3	61	junction_1	24.3629956194955	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACAGATGG	-2	False	NA	NA	False	NA	NA	NA	73005943	72998494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72999860_73003020_73003138_73003644_73003731_73005692
transcript_127883.nnic	chr7	+	877	7	Fusion	ENSG00000229018.5_ENSG00000285702.1	novel	858	7	NA	NA	542	-20185	multi-exon	FALSE	canonical	2	7	junction_3	11.8415464455544	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	73006082	73049321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_73006175_73009443_73009584_73039415_73039503_73039668_73039782_73041237_73041422_73044471_73044561_73049149
transcript_127884.nnic	chr7	+	867	7	Fusion	ENSG00000229018.5_ENSG00000285702.1	novel	858	7	NA	NA	542	-20185	multi-exon	FALSE	canonical	3	8	junction_3	11.5818344353945	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	73006082	73049321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_73006175_73009443_73009584_73039415_73039503_73039678_73039782_73041237_73041422_73044471_73044561_73049149
transcript_127891.known	chr7	+	710	6	FSM	ENSG00000174384.9	ENST00000333674.5	710	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	14.7729482500955	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73093656	73105389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73093797_73095681_73095769_73095934_73096048_73097383_73097568_73100617_73100707_73105292
transcript_127895.known	chr7	+	3609	24	FSM	ENSG00000233369.7	ENST00000544802.5	3609	24	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_21	565.57864375207	4344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	-2	True	NA	NA	False	AATAAA	-14	NA	73154937	73207283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
transcript_1279.known	chr1	+	1088	7	FSM	ENSG00000116288.13	ENST00000493678.5	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	3430	junction_1	387.569527812609	10581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	1	True	NA	NA	False	ATTAAA	-15	NA	7961691	7985505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_127901.known	chr7	-	1602	10	FSM	ENSG00000130305.17	ENST00000310326.8	1602	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	160.206887846872	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTACGATAGATCACAGT	-3	True	NA	-17	True	AATAAA	-12	NA	73308816	73303234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_127902.known	chr7	-	1672	9	FSM	ENSG00000130305.17	ENST00000252594.10	1672	9	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_7	52.9691832578151	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	7	True	NA	-12	True	AATAAA	-17	NA	73308806	73303229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_127905.nic	chr7	-	2455	7	ISM	ENSG00000009954.11	ENST00000404251.1	5428	19	313	35473	313	-14574	5prime_fragment	FALSE	canonical	3	18	junction_5	3.29983164553722	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAGTTGAGAATGGGT	-6	True	NA	-25	True	AATAAA	-6	NA	73521965	73477037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_73478570_73489193_73489392_73492799_73492922_73498496_73498699_73508326_73508472_73510735_73510853_73521826
transcript_127909.known	chr7	-	1638	6	FSM	ENSG00000106635.8	ENST00000482231.5	1638	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	119.643804687079	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAAAATTAAACT	752	False	NA	-41	True	NA	NA	NA	73557251	73536387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557040
transcript_127910.known	chr7	-	1663	6	FSM	ENSG00000106635.8	ENST00000223368.7	1663	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	31.4922212617656	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGGTATCTGAGTGC	-25	True	NA	-9	True	ATTAAA	-15	NA	73557690	73536355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557486
transcript_127911.known	chr7	-	653	5	FSM	ENSG00000106635.8	ENST00000464288.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	156.787276269473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATTTATTGCATTCTGG	-8	True	NA	NA	False	NA	NA	NA	73557241	73537265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557040
transcript_127912.known	chr7	-	887	5	FSM	ENSG00000106635.8	ENST00000454871.5	887	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	127.332978838948	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGCACCTTCTAGA	56	True	NA	NA	False	NA	NA	NA	73557609	73536953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557486
transcript_127915.known	chr7	-	4344	7	FSM	ENSG00000106638.18	ENST00000305632.11	4344	7	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_2	16.7199149386459	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTGTATAGCCTATTT	29	True	NA	NA	False	TTTAAA	-1	NA	73578579	73567536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
transcript_127917.known	chr7	-	2209	7	FSM	ENSG00000106638.18	ENST00000450285.5	2209	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	65.3624509944356	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	18	True	NA	-52	True	AATAAA	-28	NA	73578590	73569659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573960_73574123_73574382_73574514_73578419
transcript_127930.known	chr7	+	1201	12	FSM	ENSG00000071462.12	ENST00000265758.7	1201	12	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_10	69.2246313589091	5966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	4	True	NA	6	True	AATAAA	-16	NA	73683596	73698212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_127931.known	chr7	+	1219	13	FSM	ENSG00000071462.12	ENST00000423497.5	1219	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	316.623714192239	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTCTGGCATCTCCCA	33	False	NA	2	True	AATAAA	-12	NA	73683625	73698208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697465_73697517_73697604_73697695_73697831
transcript_127932.known	chr7	+	1260	12	FSM	ENSG00000071462.12	ENST00000430270.5	1260	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	250.54515767234	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACATAATGAAACTTC	33	False	NA	NA	False	NA	NA	NA	73683625	73698104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73684001_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_127933.known	chr7	+	632	7	FSM	ENSG00000071462.12	ENST00000441822.5	632	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	327.917164336768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTCCCTCGGCTACTGG	8	True	NA	NA	False	NA	NA	NA	73683600	73692646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73683902_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595
transcript_127934.known	chr7	+	1815	11	FSM	ENSG00000071462.12	ENST00000463307.5	1815	11	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_9	72.3474947734889	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAGAGCATCTTATTT	16	True	NA	-50	True	AATGAA	-38	NA	73683608	73698156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_127943.known	chr7	-	1447	6	FSM	ENSG00000106077.19	ENST00000437775.7	1447	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	132.32989080325	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	1	True	NA	-11	True	AATAAA	-16	NA	73738852	73736093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738443_73738645
transcript_127944.known	chr7	-	1463	6	FSM	ENSG00000106077.19	ENST00000357419.9	1463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	122.463708910028	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	1	True	NA	-11	True	AATAAA	-16	NA	73738852	73736093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738332_73738464_73738645
transcript_127950.known	chr7	-	1562	5	FSM	ENSG00000106077.19	ENST00000497897.5	1562	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	134.127737623506	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-1	True	NA	-11	True	AATAAA	-16	NA	73738781	73736093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737736_73738332_73738464_73738645
transcript_127951.known	chr7	-	1277	5	FSM	ENSG00000106077.19	ENST00000395147.9	1277	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	131.913797610409	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	7	True	NA	-11	True	AATAAA	-16	NA	73738832	73736093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737111_73737561_73737736_73738327_73738464_73738645
transcript_127955.known	chr7	+	662	4	FSM	ENSG00000225969.2	ENST00000427153.2	662	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGCCTGTCTGAGTC	NA	False	NA	NA	False	ATTAAA	-38	NA	73735037	73736158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73735091_73735240_73735500_73735727_73735849_73735929
transcript_127957.known	chr7	-	890	4	FSM	ENSG00000106077.19	ENST00000458339.6	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	163.882749414194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTAGGCAACAGAGCA	30	False	NA	NA	False	NA	NA	NA	73738823	73736289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73737561_73737736_73738327_73738464_73738645
transcript_127959.known	chr7	-	1274	1	FSM	ENSG00000165215.6	ENST00000395145.3	1274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGGAGCCTCCTTGTT	-1	True	NA	-5	True	AATAAA	-17	NA	73770270	73768996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73769000_73770300
transcript_127960.known	chr7	+	1695	1	FSM	ENSG00000189143.10	ENST00000340958.4	1695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1517	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCTCTGATTTCA	-2	True	NA	13	True	AATAAA	-24	NA	73830995	73832690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73831000_73832700
transcript_127962.known	chr7	-	922	6	FSM	ENSG00000165171.11	ENST00000297873.9	922	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	10.36532681588	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	8	True	NA	-5	True	ATTAAA	-16	NA	73842516	73834589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
transcript_127964.nnic	chr7	-	820	5	NIC	ENSG00000165171.11	novel	922	6	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_4	20.3592730715023	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	NA	False	NA	-5	True	ATTAAA	-16	NA	73842541	73834589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842489
transcript_127967.nnic	chr7	-	716	4	NIC	ENSG00000165171.11	novel	922	6	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	19.258475767539	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	-12	True	NA	-5	True	ATTAAA	-16	NA	73842536	73834589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_73835003_73841069_73841199_73842017_73842145_73842489
transcript_127970.nic	chr7	-	716	2	ISM	ENSG00000165171.11	ENST00000493174.1	823	4	-20	1895	-20	-1895	5prime_fragment	FALSE	canonical	3	30	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCATGTGGACTCAGC	-12	True	NA	NA	False	NA	NA	NA	73842536	73841475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_73842145_73842489
transcript_127975.known	chr7	+	3139	31	FSM	ENSG00000049540.19	ENST00000414324.5	3139	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.25327512231544	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGGGGATTATTTTTG	-8	True	NA	9	True	AATAAA	-21	NA	74028128	74069677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74028270_74035363_74035415_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043102_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74065943_74065998_74066731_74066777_74068656
transcript_127976.nic	chr7	+	2091	8	ISM	ENSG00000106683.15	ENST00000538333.3	2170	15	14804	-1067	-7485	0	3prime_fragment	FALSE	canonical	3	51	junction_7	10.2539191113865	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTGCGTGGCGATGTGT	5379	False	NA	17	True	AATAAA	-24	NA	74107882	74122525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_74107958_74108904_74109037_74111647_74111708_74111932_74111999_74115801_74115959_74120582_74120639_74120891_74121050_74121138
transcript_12798.nnic	chr1	-	642	4	NIC	ENSG00000203721.8	novel	759	4	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.9938250421547	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTTTTCTTT	520	False	NA	NA	False	AATAAA	-16	NA	200374158	200342543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_200342758_200368664_200368872_200373092_200373170_200374014
transcript_127980.known	chr7	+	2563	7	FSM	ENSG00000106682.16	ENST00000265753.13	2563	7	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_4	1327.37946722104	13071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	7	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74190246_74190307_74194740_74194879_74195168
transcript_127986.known	chr7	+	2503	6	FSM	ENSG00000106682.16	ENST00000353999.6	2503	6	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_1	336.836221330189	15273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	7	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_12799.nnic	chr1	-	642	3	NNC	ENSG00000203721.8	novel	1186	5	NA	NA	-15	30946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAACTCTATAAGGTAAG	520	False	NA	NA	False	TATAAA	-16	NA	200374158	200311594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_200312016_200373092_200373170_200374014
transcript_127994.known	chr7	+	2776	5	FSM	ENSG00000106682.16	ENST00000495187.2	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_1	376.586311487818	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAACCTTACGTAATA	4	True	NA	NA	False	AGTAAA	-39	NA	74174352	74197076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740
transcript_127996.known	chr7	+	2312	5	FSM	ENSG00000106682.16	ENST00000677570.1	2312	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	1395.73090171422	12595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	7	True	NA	NA	False	AATAAA	-16	NA	74174355	74197093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_127998.known	chr7	+	831	4	FSM	ENSG00000106682.16	ENST00000489484.5	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	2842	junction_1	389.00414165176	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGATGACTTCAATTCTGG	2	True	NA	NA	False	NA	NA	NA	74174330	74190287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821
transcript_127999.known	chr7	+	1797	7	FSM	ENSG00000106682.16	ENST00000678438.1	1797	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	1261.69349377027	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTGAATGATCTTT	48	False	NA	NA	False	AGTAAA	-13	NA	74174230	74197050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168_74195857_74196641
transcript_1280.known	chr1	+	567	6	FSM	ENSG00000116288.13	ENST00000460192.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1991.42357121733	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTTCATAAAGCATGCAG	-28	True	NA	NA	False	NA	NA	NA	7961662	7971048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7969084_7969149_7969344_7969405_7970893
transcript_12800.nic	chr1	-	1088	3	NIC	ENSG00000203721.8	novel	759	4	NA	NA	-15	0	intron_retention	FALSE	canonical	1	1	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTTTTCTTT	520	False	NA	NA	False	AATAAA	-16	NA	200374158	200342543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_200343411_200373092_200373170_200374014
transcript_128007.known	chr7	-	1576	10	FSM	ENSG00000049541.11	ENST00000352131.7	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_6	370.175567288393	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCATGTGAAGCCTCG	8	True	NA	-22	True	AATAAA	-26	NA	74254389	74231498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_128008.known	chr7	-	1685	11	FSM	ENSG00000049541.11	ENST00000055077.8	1685	11	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_7	136.578365783165	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGACCATGTGAAGCC	-2	True	NA	-25	True	AATAAA	-23	NA	74254399	74231501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_128009.known	chr7	-	1635	10	FSM	ENSG00000049541.11	ENST00000621097.4	1635	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	399.264168869697	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTGACCATGTGAAG	NA	False	NA	-27	True	AATAAA	-21	NA	74254458	74231503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249738_74249781_74252428_74252499_74254270
transcript_12801.nnic	chr1	-	432	3	FSM	ENSG00000203721.8	ENST00000688178.1	408	3	-27	3	-15	-3	multi-exon	FALSE	canonical	3	7	junction_1	6.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTTTTC	520	False	NA	NA	False	AATAAA	-13	NA	200374158	200342546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200342758_200373092_200373170_200374014
transcript_128010.known	chr7	-	1029	2	FSM	ENSG00000287815.2	ENST00000661689.2	1050	2	21	0	21	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGAGACCTTGTCTCA	24	False	NA	NA	False	NA	NA	NA	74289286	74280746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74281551_74289061
transcript_128013.known	chr7	+	387	1	FSM	ENSG00000273069.1	ENST00000608433.1	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTCTCGGTTCGAAAT	NA	False	NA	NA	False	ATTAAA	-15	NA	74606912	74607299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74606900_74607300
transcript_128014.known	chr7	+	4730	35	FSM	ENSG00000263001.8	ENST00000650807.1	4730	35	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_1	746.694327476191	4270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATTGCTCTCTCGGCTGT	-2	True	NA	NA	False	AATAAA	-27	NA	74650230	74760692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74650797_74689123_74689228_74690972_74691112_74698960_74699096_74700246_74700431_74700605_74700635_74705163_74705219_74706389_74706434_74711031_74711110_74714856_74714917_74716893_74716951_74718878_74718942_74728785_74728897_74730228_74730295_74732478_74732663_74733922_74733982_74735460_74735533_74736499_74736684_74738044_74738104_74743448_74743521_74744757_74744942_74745882_74745942_74746336_74746412_74748014_74748117_74749024_74749091_74749267_74749452_74751360_74751417_74752089_74752171_74753093_74753178_74753845_74754030_74755508_74755538_74756819_74756862_74757958_74758001_74758779_74758856_74759547
transcript_128015.known	chr7	+	865	2	FSM	ENSG00000263001.8	ENST00000652150.1	865	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCTAATATTTATATA	-2	True	NA	NA	False	ATTAAA	-23	NA	74650230	74651491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74650797_74651192
transcript_128020.nic	chr7	-	1124	7	NIC	ENSG00000277072.5	novel	1017	10	NA	NA	-6	245	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	27.2213151776324	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACAAATGGAGAA	NA	False	NA	NA	False	NA	NA	NA	74890616	74883167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890270
transcript_128024.known	chr7	-	1047	5	FSM	ENSG00000277072.5	ENST00000611766.4	1047	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	29.978117018919	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCCTCTGCTGTGG	-1	True	NA	NA	False	NA	NA	NA	74890566	74883766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890270
transcript_128026.known	chr7	-	2130	8	FSM	ENSG00000277072.5	ENST00000426587.5	2130	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	26.5160713684423	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGAAGCCCCATTGT	NA	False	NA	-25	True	AGTAAA	-16	NA	74890610	74882162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_128030.nnic	chr7	+	909	7	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3393	7914	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	15.1483405765193	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	74890722	74905749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74896398_74896512_74897651_74897836_74900886_74900976_74905577
transcript_128046.nnic	chr7	+	796	6	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3393	7914	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_5	7.95989949685296	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	74890722	74905749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886_74900976_74905577
transcript_128059.nnic	chr7	+	655	5	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3393	3171	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	5.71729831301464	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74890722	74901006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886
transcript_128060.nnic	chr7	+	707	5	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3393	7914	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	17.8955301681733	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	74890722	74905749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74905577
transcript_128064.nnic	chr7	+	655	5	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3339	7914	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	16.8819430161341	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	-9	True	NA	NA	False	AATAAA	-19	NA	74890776	74905749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74897651_74897836_74900886_74900976_74905577
transcript_128085.known	chr7	-	2309	11	FSM	ENSG00000274523.5	ENST00000610322.5	2309	11	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	16.1133485036475	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	15	True	NA	-27	True	AATAAA	-28	NA	75073802	75042182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
transcript_128086.known	chr7	+	8100	9	FSM	ENSG00000274070.2	ENST00000616305.2	8100	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	6.13901457890434	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGCTGGCTGGTGGCCGT	5	True	NA	29	True	ATTAAA	-15	NA	74964704	75031528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74965099_75007993_75008065_75017597_75017792_75017989_75018123_75018971_75019096_75020038_75020150_75021873_75021957_75024439_75024535_75024633
transcript_128095.nnic	chr7	-	881	7	Fusion	ENSG00000276840.1_ENSG00000278416.1	novel	612	5	NA	NA	513	78	multi-exon	FALSE	canonical	2	3	junction_2	8.40634680861233	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	75359037	75288041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_75288214_75292801_75292891_75295940_75296127_75297394_75297508_75297673_75297761_75299653_75299794_75358943
transcript_1281.known	chr1	+	795	6	FSM	ENSG00000116288.13	ENST00000377493.9	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	1699.45454778879	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	10	True	NA	29	True	AATAAA	-19	NA	7961700	7985281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
transcript_128103.nnic	chr7	-	792	6	Fusion	ENSG00000276840.1_ENSG00000278416.1	novel	612	5	NA	NA	513	78	multi-exon	FALSE	canonical	2	3	junction_1	8.33306666239986	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	75359037	75288041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_75288214_75295940_75296127_75297394_75297508_75297673_75297761_75299653_75299794_75358943
transcript_128160.known	chr7	-	5867	15	FSM	ENSG00000272391.6	ENST00000615331.5	5867	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	52.2121359729435	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACGTTCTGCATTTTAT	-2	True	NA	NA	False	AATAAA	-19	NA	75486299	75416785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75418894_75419319_75419443_75421508_75423204_75424048_75424226_75424525_75424629_75425073_75425196_75425634_75425709_75426361_75426454_75437514_75437687_75439143_75439225_75440953_75441116_75441431_75441648_75474703_75474883_75475061_75475189_75485863
transcript_128164.known	chr7	+	972	6	FSM	ENSG00000223705.10	ENST00000422386.5	972	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	168.026188435017	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	32	False	NA	17	True	AATAAA	-18	NA	75410394	75416787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415980_75416031_75416102_75416192_75416274
transcript_128166.nnic	chr7	-	1592	13	NNC	ENSG00000127946.17	novel	7066	29	NA	NA	-27358	-2737	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_11	22.785686296445	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGCATCACCTAGAC	23	True	NA	NA	False	NA	NA	NA	75639201	75560958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_75561402_75562072_75562171_75562934_75563076_75563187_75563264_75568198_75568257_75573760_75573902_75581236_75581299_75582074_75582152_75586752_75586834_75592055_75592113_75592371_75592515_75599183_75599248_75639050
transcript_128168.nnic	chr7	-	970	2	NNC	ENSG00000127946.17	novel	583	6	NA	NA	-27358	-16337	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	0	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGAGAGTTTTTTTTT	23	True	NA	NA	False	NA	NA	NA	75639201	75598428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_75599248_75639050
transcript_128169.known	chr7	-	503	2	FSM	ENSG00000127946.17	ENST00000479835.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCCTGCCCTCAAAAAAA	14	True	NA	NA	False	NA	NA	NA	75738962	75733459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75733801_75738800
transcript_128188.nnic	chr7	-	613	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1592	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	84.1704619606348	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	1478	False	NA	-11	True	AATAAA	-14	NA	75788304	75769537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788209
transcript_128189.nnic	chr7	-	762	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1353	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	75.6879558890757	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	1239	False	NA	-11	True	AATAAA	-14	NA	75788543	75769537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788299
transcript_12819.known	chr1	+	1098	3	FSM	ENSG00000230623.7	ENST00000659976.2	1179	3	0	81	0	-14	multi-exon	FALSE	canonical	0	0	junction_2	1	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCCAAATGAAATTCCAA	11	False	NA	1	True	ATTAAA	-18	NA	200411683	200474648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200472040_200472120_200473908
transcript_128190.known	chr7	-	703	4	FSM	ENSG00000006606.9	ENST00000394905.2	703	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.1129967879302	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTCATAACATTTTTTG	NA	False	NA	-6	True	AATAAA	-19	NA	75789896	75769532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75769790_75771888_75772004_75772103_75772255_75789716
transcript_128195.known	chr7	-	475	3	FSM	ENSG00000006606.9	ENST00000005180.9	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	2.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	-5	True	NA	-11	True	AATAAA	-14	NA	75772211	75769537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75769790_75771888_75772004_75772103
transcript_128196.known	chr7	+	1831	5	FSM	ENSG00000005486.17	ENST00000454791.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	196.100101988755	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTCTGCCTTTGTAT	3	True	NA	-26	True	NA	NA	NA	75879003	75888884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75879261_75881364_75881487_75881828_75882237_75883697_75883849_75887991
transcript_1282.known	chr1	+	1127	7	FSM	ENSG00000116288.13	ENST00000338639.10	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	1134.28544565388	7288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	20	True	NA	NA	False	ATTAAA	-15	NA	7961710	7985505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_128201.known	chr7	+	1721	4	FSM	ENSG00000005486.17	ENST00000006777.11	1721	4	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_1	33.0689515339624	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGCGTGTGCTTCCT	-17	True	NA	16	True	TATAAA	-20	NA	75879033	75888926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75879261_75881828_75882237_75883697_75883849_75887991
transcript_128207.known	chr7	+	2446	16	FSM	ENSG00000127948.16	ENST00000461988.6	2446	16	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	45.6657420830977	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	-2	True	NA	26	True	AATAAA	-16	NA	75915154	75986855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158_75986242_75986336
transcript_128209.known	chr7	+	2532	15	FSM	ENSG00000127948.16	ENST00000394893.5	2532	15	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	46.6657677270076	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	7	True	NA	26	True	AATAAA	-16	NA	75915163	75986855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158
transcript_12821.nnic	chr1	+	695	3	FSM	ENSG00000230623.7	ENST00000692619.1	501	3	-194	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	NA	False	NA	11	True	AATAAA	-22	NA	200411631	200415550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200412585_200412764_200415364
transcript_128215.known	chr7	-	1398	12	FSM	ENSG00000189077.11	ENST00000493111.7	1398	12	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_6	19.3570197829117	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGGTTATTTAAAA	26	True	NA	2	True	AATACA	-22	NA	75994595	75986830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_128217.known	chr7	-	1161	12	FSM	ENSG00000189077.11	ENST00000439537.5	1161	12	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	62.2637684332079	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGCGTGTGTGTTCTC	47	False	NA	-7	True	AATAAA	-17	NA	75994574	75986984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75987224_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_12822.known	chr1	+	1391	3	FSM	ENSG00000230623.7	ENST00000654000.1	1391	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.5	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATTTTCATGAGTCAC	48	False	NA	10	True	AGTAAA	-15	NA	200411720	200474725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200444613_200444946_200473908
transcript_128220.known	chr7	-	1352	11	FSM	ENSG00000189077.11	ENST00000440632.5	1352	11	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_9	15.8682072081253	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCTGAAGGAAGACCTG	-35	True	NA	-63	True	NA	NA	NA	75994656	75987040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_128236.known	chr7	+	1028	4	FSM	ENSG00000127948.16	ENST00000493973.1	1028	4	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	12.328828005938	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	3632	False	NA	26	True	AATAAA	-16	NA	75985569	75986855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75985850_75985922_75986069_75986158_75986242_75986336
transcript_128237.known	chr7	-	641	5	FSM	ENSG00000189077.11	ENST00000493251.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	97.8225434140822	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCCTGAGCGTGTGTGT	6410	False	NA	-11	True	AATAAA	-13	NA	75988211	75986988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75987286_75987359_75987420_75987717_75987811_75987922_75987985_75988082
transcript_128246.nnic	chr7	-	1270	9	NNC	ENSG00000127952.17	novel	1415	9	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	canonical	2	33	junction_2	69.6419413859206	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	939	False	NA	-5	True	NA	NA	NA	76048060	75996341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_75996600_76000889_76000955_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_128251.known	chr7	-	1415	9	FSM	ENSG00000127952.17	ENST00000248600.5	1415	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	75.3913746724385	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTGTACTGATTCTT	-27	True	NA	-1	True	NA	NA	NA	76048003	75996337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047661
transcript_128252.known	chr7	-	1147	9	FSM	ENSG00000127952.17	ENST00000431581.5	1147	9	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_8	58.1055074842308	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCCAGAGTGTGTATA	23	True	NA	-72	True	NA	NA	NA	76047953	75996408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047811
transcript_128253.known	chr7	-	1411	9	FSM	ENSG00000127952.17	ENST00000359697.8	1411	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	75.7013044801739	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-24	True	NA	-5	True	NA	NA	NA	76048000	75996341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047661
transcript_128267.nic	chr7	-	1172	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	67.0303007936694	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	939	False	NA	-5	True	NA	NA	NA	76048060	75996341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_128271.nic	chr7	-	1181	8	NIC	ENSG00000127952.17	novel	1415	9	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_1	61.7483371667379	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	939	False	NA	-29	True	NA	NA	NA	76048060	75996365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_75996600_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_128279.known	chr7	-	953	7	FSM	ENSG00000127952.17	ENST00000340062.9	953	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	86.4073042180013	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-7	True	NA	-5	True	NA	NA	NA	76047983	75996341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76028641_76028704_76030420_76030525_76047811
transcript_128280.known	chr7	-	1127	7	FSM	ENSG00000127952.17	ENST00000360591.7	1127	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	108.182587426176	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTGTACTGATTCTT	-27	True	NA	-1	True	NA	NA	NA	76048003	75996337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76028641_76028704_76030420_76030525_76047661
transcript_128296.known	chr7	-	764	6	FSM	ENSG00000127952.17	ENST00000438695.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	77.2590447779417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	1843	False	NA	-29	True	NA	NA	NA	76028672	75996365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76021850_76021993_76028641
transcript_128297.known	chr7	-	636	5	FSM	ENSG00000127952.17	ENST00000460184.2	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_4	27.5771644662754	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCCTCAGGTAGGGCCA	-28	True	NA	NA	False	NA	NA	NA	76048004	76013752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_128300.known	chr7	+	648	2	FSM	ENSG00000146701.12	ENST00000461263.2	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCTCGCATTGCCTT	-38	True	NA	7	True	ATTAAA	-19	NA	76048050	76049047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76048227_76048575
transcript_128301.known	chr7	+	2170	9	FSM	ENSG00000146701.12	ENST00000315758.10	2170	9	0	0	0	0	multi-exon	FALSE	canonical	3	2397	junction_4	107.789653376379	6691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTCTCTTGCATA	17	True	NA	18	True	AATAAA	-23	NA	76048105	76067508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_128302.known	chr7	+	2020	8	FSM	ENSG00000146701.12	ENST00000443006.5	2020	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	844.052421236927	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCTCTCTTGCA	-4	True	NA	16	True	AATAAA	-21	NA	76048084	76067506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76048227_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_128303.nic	chr7	+	464	4	ISM	ENSG00000177679.16	ENST00000611745.2	3617	15	58671	22495	-4840	4758	internal_fragment	FALSE	canonical	2	10	junction_2	0.471404520791032	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAGAACAAAGAGAAGAA	NA	False	NA	NA	False	AAGAAA	-2	NA	76260566	76264792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_76260904_76261351_76261415_76261545_76261582_76264764
transcript_128307.known	chr7	+	527	3	FSM	ENSG00000106211.10	ENST00000429938.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1337.5	7825	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCCCAGGCCCTGGTG	12	True	NA	43	True	AATAAA	-20	NA	76303576	76304295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76303728_76303801_76303866_76303983
transcript_128309.known	chr7	-	3705	2	FSM	ENSG00000170027.7	ENST00000307630.5	3705	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	2011	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCAGTGCTCCTTAGCTTC	-2	True	NA	-21	True	AATAAA	-14	NA	76358991	76326798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_76330234_76358721
transcript_12831.known	chr1	+	319	2	FSM	ENSG00000230623.7	ENST00000635220.2	483	2	163	1	4	0	multi-exon	FALSE	canonical	3	277	junction_1	0	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	23	False	NA	11	True	AATAAA	-22	NA	200411829	200415550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200415364
transcript_128311.known	chr7	+	1483	9	FSM	ENSG00000188372.15	ENST00000336517.8	1483	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	14.2192651005599	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	-12	True	NA	NA	False	AATAAA	-15	NA	76397517	76442071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76397798_76425051_76425277_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
transcript_128312.nnic	chr7	+	1024	8	NNC	ENSG00000188372.15	novel	1846	7	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.8310209922807	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGGTCGTGGTGTGGTG	3667	False	NA	NA	False	AATAAA	-13	NA	76428606	76442069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_76428655_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
transcript_128316.known	chr7	-	2800	11	FSM	ENSG00000146700.9	ENST00000275560.4	2800	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	22.3886131772381	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCAGTCACTGTTTGA	9	True	NA	-13	True	AATAAA	-21	NA	76409697	76389336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_76390376_76391963_76392042_76393404_76393717_76393829_76393905_76395252_76395331_76397517_76397833_76398719_76398798_76400285_76400592_76401007_76401044_76404306_76404506_76409413
transcript_128317.nic	chr7	-	868	3	ISM	ENSG00000146700.9	ENST00000275560.4	2800	11	-21	11343	-21	-11343	5prime_fragment	FALSE	canonical	3	43	junction_1	10.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAATAATAAAATAAAAGGAC	-12	True	NA	NA	False	NA	NA	NA	76409718	76400679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_76401044_76404306_76404506_76409413
transcript_128319.nic	chr7	-	2143	2	ISM	ENSG00000146700.9	ENST00000275560.4	2800	11	-21	13331	-21	-13331	5prime_fragment	FALSE	canonical	3	64	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGCAATGAGGACA	-12	True	NA	NA	False	AAAAAG	-4	NA	76409718	76402667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_76404506_76409413
transcript_12832.known	chr1	+	1768	2	FSM	ENSG00000230623.7	ENST00000634596.2	2379	2	168	443	-12	-443	multi-exon	FALSE	canonical	3	376	junction_1	0	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTCGATTGGAATA	-7	True	NA	1	True	AATAAA	-20	NA	200411799	200475513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200473908
transcript_128320.nnic	chr7	-	684	2	NNC	ENSG00000146700.9	novel	2800	11	NA	NA	-85	-17124	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTAATTAATTTGAAAG	NA	False	NA	NA	False	AATAAA	-31	NA	76409782	76406460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_76406776_76409413
transcript_128323.known	chr7	+	2641	11	FSM	ENSG00000091073.20	ENST00000430490.7	2641	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	67.6493902411544	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	0	True	NA	16	True	AATAAA	-16	NA	76461708	76505991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_128325.nic	chr7	+	2553	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_2	32.9919556225827	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461655	76505991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_128330.nic	chr7	+	2368	9	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	45.5679437762996	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	16	True	AATAAA	-16	NA	76461675	76505991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_128333.nnic	chr7	+	1602	7	Fusion	ENSG00000230305.2_ENSG00000243566.7	novel	2250	6	NA	NA	-174	-4809	multi-exon	FALSE	non_canonical	0	0	junction_6	39.8538998509974	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	76510350	76527883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_76510738_76510902_76511053_76511656_76511883_76513083_76513164_76513946_76514077_76515044_76515457_76527666
transcript_128336.nnic	chr7	+	1522	6	Fusion	ENSG00000230305.2_ENSG00000243566.7	novel	1041	5	NA	NA	-174	-4809	multi-exon	FALSE	non_canonical	0	0	junction_5	39.4380526902635	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	76510350	76527883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_76510738_76510902_76511053_76511656_76511883_76513946_76514077_76515044_76515457_76527666
transcript_128342.known	chr7	+	748	4	FSM	ENSG00000205485.13	ENST00000423084.1	748	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.08248290463863	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTCTACATCAGAACC	68	False	NA	NA	False	NA	NA	NA	76549410	76621388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76549657_76551463_76551523_76615493_76615664_76621115
transcript_128343.known	chr7	+	4646	15	FSM	ENSG00000265479.7	ENST00000636308.1	4646	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	45.5891703036981	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTGTCTTGATAAATAA	NA	False	NA	NA	False	NA	NA	NA	76959834	77025733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76959950_76961656_76961822_76978527_76978877_76980620_76981261_76990268_76990370_77000308_77000389_77002162_77002322_77004217_77004308_77005549_77005776_77006978_77007060_77011879_77012020_77013911_77013999_77015671_77015856_77018908_77018998_77023593
transcript_128344.nnic	chr7	-	428	3	Antisense	novelGene_ENSG00000135205.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTTAGCTTCATTGT	NA	False	NA	NA	False	AATAAA	-18	NA	77306993	77274222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_77274368_77277513_77277576_77306772
transcript_128346.known	chr7	+	3384	18	FSM	ENSG00000127947.16	ENST00000248594.11	3384	18	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	63.8740109383809	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGTTGCCTTGGCTT	-14	True	NA	19	True	ATTAAA	-23	NA	77537294	77640069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77537646_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_128347.known	chr7	+	2316	18	FSM	ENSG00000127947.16	ENST00000415482.6	2316	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	67.917311826034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGAGCTAGAAGACAC	-5	True	NA	NA	False	NA	NA	NA	77538034	77639280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77538107_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_128354.nnic	chr7	-	778	4	FSM	ENSG00000214293.10	ENST00000687850.1	768	4	-31	21	-21	0	multi-exon	FALSE	canonical	3	10	junction_3	57.7946556544999	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	186	False	NA	-60	True	AATAAA	-16	NA	77696298	77683850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77684252_77685201_77685329_77695895_77696019_77696171
transcript_128358.known	chr7	-	2856	3	FSM	ENSG00000214293.10	ENST00000663654.2	2875	3	19	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	59	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCGGAGCTGTGAGAAAT	-4	True	NA	-37	True	NA	NA	NA	77696255	77681606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77684252_77685201_77685329_77696171
transcript_12836.known	chr1	-	4864	2	FSM	ENSG00000162702.8	ENST00000367353.2	4864	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAGAAAGGAGATATT	-13	True	NA	-33	True	AATAAA	-18	NA	200410036	200404950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200409724_200409945
transcript_128360.known	chr7	-	609	3	FSM	ENSG00000214293.10	ENST00000416650.5	609	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAAATTGTGTAGG	-11	True	NA	-152	True	AAAACA	-38	NA	77696262	77683942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77684334_77685201_77685329_77696171
transcript_128362.known	chr7	+	6406	8	FSM	ENSG00000187257.16	ENST00000334955.13	6406	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	12.4178936069147	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTACTTTTGTAATT	12	True	NA	17	True	AATAAA	-21	NA	77696458	77783022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77697056_77736409_77736527_77749423_77750065_77765494_77765633_77768660_77768804_77773146_77773315_77778337_77778447_77778529
transcript_128363.known	chr7	+	2667	8	FSM	ENSG00000187257.16	ENST00000445288.5	2667	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.2460106068079	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACAAACTGACAATTCA	225	False	NA	33	True	AATAAA	-22	NA	77697150	77779682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77697349_77736409_77736527_77749423_77750065_77765494_77765633_77768660_77768804_77773146_77773315_77778337_77778447_77778529
transcript_128365.known	chr7	-	877	2	FSM	ENSG00000135211.6	ENST00000257663.4	877	2	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	0	2297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACATGACTCTTGA	-30	True	NA	-11	True	AATAAA	-18	NA	77798434	77793727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77794424_77798253
transcript_128366.known	chr7	+	4793	18	FSM	ENSG00000006576.16	ENST00000307305.12	4793	18	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_12	28.1740757916352	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTTTTTTTTTTAATT	22	True	NA	19	True	AATAAA	-16	NA	77798804	77957225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029_77940303_77940527_77940660_77942699_77942787_77949677_77949834_77951616_77951713_77953768_77953895_77954857
transcript_128369.known	chr7	+	1977	12	FSM	ENSG00000006576.16	ENST00000424760.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	16.0988680881299	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTAATTTTGTTTT	30	True	NA	4	True	AATAAA	-15	NA	77798812	77940459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029
transcript_12837.known	chr1	-	4891	2	FSM	ENSG00000162702.8	ENST00000294740.3	4891	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATATTACTTAATATCC	1	True	NA	-22	True	AATAAA	-29	NA	200410056	200404939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200409720_200409945
transcript_128376.known	chr7	+	1738	9	FSM	ENSG00000006576.16	ENST00000415251.6	1738	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_8	13.6565002837477	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTACTCTTTTTGAGCT	20	True	NA	NA	False	AATAAA	-33	NA	77798887	77923392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622
transcript_128379.known	chr7	+	558	2	FSM	ENSG00000232756.1	ENST00000438324.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGCTTTCTGCATCTCCC	NA	False	NA	NA	False	NA	NA	NA	77990419	77995171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77990678_77994871
transcript_12838.known	chr1	-	2933	3	FSM	ENSG00000162702.8	ENST00000367352.3	2933	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	82.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGACAAAAAAAA	-4	True	NA	63	True	TTTAAA	-4	NA	200409992	200406729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200409453_200409560_200409724_200409945
transcript_128381.known	chr7	-	1661	10	FSM	ENSG00000187391.22	ENST00000636717.1	1661	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	25.4024398555982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTGAGCCATACAGAAGT	451	False	NA	NA	False	NA	NA	NA	78770859	78256024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78554566_78554672_78627119_78627240_78770850
transcript_128382.known	chr7	-	2013	9	FSM	ENSG00000187391.22	ENST00000628781.1	2013	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	11.9889271830302	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTTTTTGAATTCA	-13	True	NA	-21	True	AATAAA	-37	NA	78771080	78255788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
transcript_128386.nic	chr7	-	1136	4	ISM	ENSG00000187391.22	ENST00000628781.1	2013	9	-267	245696	-24	236	5prime_fragment	FALSE	canonical	3	49	junction_2	11.5566238822398	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAACATGAAATTCTG	NA	False	NA	NA	False	TATAAA	-38	NA	78771347	78501484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_78501788_78521429_78521646_78627119_78627240_78770850
transcript_12839.nnic	chr1	+	737	3	FSM	ENSG00000230623.7	ENST00000427825.2	725	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	50	junction_2	163	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCATTATATTCTGCA	-7	True	NA	NA	False	TATAAA	-15	NA	200411799	200478349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200473908_200474101_200477967
transcript_128395.nnic	chr7	-	1271	3	NNC	ENSG00000187391.22	novel	2802	2	NA	NA	-24	24489	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	35.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGCTTGTTGTACCTG	NA	False	NA	NA	False	ATTAAA	-19	NA	78771347	78589876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_78590531_78627119_78627240_78770850
transcript_128396.known	chr7	-	2349	10	FSM	ENSG00000187391.22	ENST00000630991.2	2349	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	25.5883847106214	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGTCTTTTTCTATTT	-12	True	NA	-1	True	ATTAAA	-23	NA	78771322	78255768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78583420_78583495_78627119_78627240_78770850
transcript_128397.known	chr7	+	1082	5	FSM	ENSG00000234456.10	ENST00000414797.6	1082	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.08972473588517	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGATGATGTGTGTC	-24	True	NA	35	True	AATAAA	-29	NA	79453949	79471208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79454245_79454885_79455008_79458846_79459000_79470593_79470680_79470782
transcript_128398.known	chr7	+	846	4	FSM	ENSG00000234456.10	ENST00000426835.6	846	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTGTGAGTGTGATGA	124	False	NA	27	True	AATAAA	-21	NA	79453002	79471200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79453192_79458846_79459000_79470593_79470680_79470782
transcript_128399.known	chr7	+	676	4	FSM	ENSG00000234456.10	ENST00000655337.2	679	4	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCTCAGTGTGAGTG	38	False	NA	21	True	AATAAA	-15	NA	79453630	79471194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79453656_79458846_79459000_79470593_79470680_79470782
transcript_128400.known	chr7	+	5040	4	FSM	ENSG00000234456.10	ENST00000669576.1	5040	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAGCTAAATAAAAGA	258	False	NA	NA	False	NA	NA	NA	79453850	79463906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79454245_79454885_79455008_79458846_79459000_79459535
transcript_128401.known	chr7	+	4643	3	FSM	ENSG00000234456.10	ENST00000661940.1	4643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTAGGACTAATGGAGA	686	False	NA	NA	False	AATAAA	-12	NA	79453564	79463934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79453656_79458846_79459000_79459535
transcript_128403.known	chr7	+	10083	8	FSM	ENSG00000127955.17	ENST00000649796.2	10083	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	27.244171816357	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCATATTATTTTT	-14	True	NA	NA	False	AATAAA	-18	NA	80134830	80226181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_80135279_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_128406.known	chr7	+	1939	8	FSM	ENSG00000127955.17	ENST00000649214.1	1939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.5403171165658	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAACATTGCACAGACT	7	True	NA	9	True	AATAAA	-11	NA	80134851	80218032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_80135279_80188924_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_128407.known	chr7	+	3237	8	FSM	ENSG00000127955.17	ENST00000649922.1	3237	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.5403171165658	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTTAATAAATCCTAATA	8	True	NA	-24	True	AATGAA	-25	NA	80134852	80219362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_80135274_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_12841.nnic	chr1	+	1117	3	FSM	ENSG00000230623.7	ENST00000427825.2	725	3	-12	-380	-12	60	multi-exon	FALSE	canonical	3	50	junction_2	163	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGCCTGGCGGGGTGGCTC	-7	True	NA	NA	False	AAGAAA	-10	NA	200411799	200478729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200473908_200474101_200477967
transcript_128411.known	chr7	-	4874	18	FSM	ENSG00000075223.14	ENST00000265361.8	4874	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	2.22909356723487	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAGCTTTTAT	3	True	NA	1	True	AATAAA	-18	NA	80919051	80742537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_80745308_80748897_80749029_80751268_80751337_80758330_80758489_80761615_80761658_80765154_80765244_80789305_80789529_80798091_80798237_80800756_80800827_80802664_80802780_80804105_80804249_80805638_80805759_80810610_80810702_80818298_80818419_80827424_80827488_80828584_80828746_80916678_80916820_80918827
transcript_128412.known	chr7	-	1245	8	FSM	ENSG00000233491.8	ENST00000648981.1	1245	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGTTTAAGCTTTCTAG	6	True	NA	NA	False	AATAAA	-21	NA	81690414	81581652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_81581905_81583119_81583271_81584294_81584441_81594524_81594657_81597655_81597827_81607475_81607644_81625151_81625227_81690264
transcript_128415.nnic	chr7	-	846	4	NNC	ENSG00000153956.16	novel	7542	39	NA	NA	127	-182685	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	31.6262900483478	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATAGTGAAGTGAAGAC	598	False	NA	NA	False	AATAAA	-17	NA	82443588	82299728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_82300152_82335134_82335252_82349567_82349650_82443364
transcript_128417.known	chr7	-	7273	17	FSM	ENSG00000170381.14	ENST00000643230.2	7273	17	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_15	25.6514345359085	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCGTCTGGGGAGCATTT	4	True	NA	-1	True	AATAAA	-19	NA	83649139	83363237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_83368039_83385293_83385434_83386982_83387051_83392554_83392722_83394296_83394339_83396637_83396730_83400027_83400251_83402631_83402777_83405449_83405520_83405944_83406060_83407096_83407240_83408367_83408488_83418389_83418484_83466481_83466602_83469242_83469303_83490113_83490275_83648427
transcript_128424.known	chr7	-	2675	17	FSM	ENSG00000170381.14	ENST00000642232.1	2675	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	112.213924464614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGACGCATCATTAAAATG	4	True	NA	-45	True	ATTAAA	-36	NA	83648550	83371495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_83372288_83385293_83385434_83386982_83387051_83392554_83392722_83394296_83394339_83396637_83396730_83400027_83400251_83402631_83402777_83405449_83405520_83405944_83406060_83407096_83407240_83408367_83408488_83418389_83418484_83466481_83466602_83469242_83469303_83490113_83490275_83648427
transcript_12843.nnic	chr1	+	1326	3	NIC	ENSG00000230623.7	novel	725	3	NA	NA	4	58	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	188	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGCCTGGCGGGGTGGC	-2	True	NA	NA	False	AAGAAA	-8	NA	200411670	200478727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_200411963_200473908_200474183_200477967
transcript_128433.nnic	chr7	+	1004	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	150	junction_1	0	293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	22	True	AATAAA	-22	NA	83459815	83465347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_83460267_83464794
transcript_128435.nnic	chr7	+	843	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	183	junction_1	0	440	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	22	True	AATAAA	-22	NA	83459844	83465347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_83460267_83464926
transcript_128442.known	chr7	-	2550	18	FSM	ENSG00000075213.11	ENST00000436949.5	2550	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	52.0228855681552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATGAACTTTTTTCAT	NA	False	NA	NA	False	AAAACA	-8	NA	84195445	83961300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474_84194669_84195363
transcript_128444.known	chr7	-	8113	17	FSM	ENSG00000075213.11	ENST00000265362.9	8113	17	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_10	16.3553078158132	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTGTGTAGCTCAGT	0	True	NA	1	True	AGTAAA	-20	NA	84194789	83955776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
transcript_128453.known	chr7	+	4268	6	FSM	ENSG00000198822.11	ENST00000361669.7	4268	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.74165738677394	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGATAATGGTTTGTTC	-6	True	NA	NA	False	AATAAA	-21	NA	86643908	86864879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_86644873_86765005_86765614_86786260_86787117_86838838_86839906_86850369_86850545_86864281
transcript_128454.known	chr7	-	269	2	FSM	ENSG00000231255.1	ENST00000423979.1	269	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTATCTGCATTTATT	NA	False	NA	NA	False	AATAAA	-23	NA	86776022	86775080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_86775272_86775944
transcript_128474.known	chr7	+	3954	18	FSM	ENSG00000135164.19	ENST00000447863.5	3954	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	54.7968251044026	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	NA	False	NA	8	True	AATAAA	-17	NA	87152411	87196325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182016_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_128476.known	chr7	+	3702	18	FSM	ENSG00000135164.19	ENST00000331242.12	3702	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_9	32.889770814365	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	13	True	NA	8	True	AATAAA	-17	NA	87152452	87196325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_128479.nic	chr7	+	3590	17	NIC	ENSG00000135164.19	novel	3702	18	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_16	51.3864038438185	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	-20	True	NA	8	True	AATAAA	-17	NA	87152419	87196325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87195030
transcript_128481.known	chr7	+	2411	17	FSM	ENSG00000135164.19	ENST00000432937.6	2411	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	61.3684759770845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGAAGGCACACTGTT	0	True	NA	NA	False	NA	NA	NA	87152467	87195166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87152556_87163494_87163618_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_128485.known	chr7	+	3548	17	FSM	ENSG00000135164.19	ENST00000413276.6	3548	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	62.5364893482197	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTACATAGCCTTTTGC	NA	False	NA	20	True	AATAAA	-29	NA	87152408	87196337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_128489.nic	chr7	-	1405	5	NIC	ENSG00000135185.12	novel	1273	5	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_4	200.635864191824	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	7	True	NA	-3	True	AATAAA	-20	NA	87220573	87196159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220216
transcript_128490.known	chr7	-	1273	5	FSM	ENSG00000135185.12	ENST00000433078.5	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	83.2987845049374	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	-7	True	NA	-5	True	AATAAA	-18	NA	87220587	87196161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220360
transcript_128492.nnic	chr7	-	1124	5	NNC	ENSG00000135185.12	novel	1273	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_4	203.19694879599	218	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	NA	False	NA	-3	True	AATAAA	-20	NA	87220599	87196159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220523
transcript_128494.nnic	chr7	-	831	4	NNC	ENSG00000135185.12	novel	1062	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	239.738746694536	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	NA	False	NA	-3	True	AATAAA	-20	NA	87220599	87196159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_87196759_87197940_87198046_87199006_87199058_87220523
transcript_128497.known	chr7	-	769	2	FSM	ENSG00000224046.3	ENST00000433446.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTGATAACTT	9	True	NA	-5	True	AATAAA	-15	NA	87152282	87151422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87151659_87151749
transcript_128498.known	chr7	-	338	2	FSM	ENSG00000224046.3	ENST00000446309.1	338	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAGAAGCAGCATTT	NA	False	NA	-22	True	NA	NA	NA	87152420	87151439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87151659_87152301
transcript_128499.known	chr7	-	1062	4	FSM	ENSG00000135185.12	ENST00000257637.8	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_3	39.2031744746377	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-6	True	NA	-3	True	AATAAA	-20	NA	87219732	87196159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425
transcript_1285.known	chr1	+	2496	9	FSM	ENSG00000162426.16	ENST00000471889.7	2496	9	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	7.04893608993584	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	10	True	NA	7	True	AATAAA	-17	NA	8318113	8344165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_8318187_8324305_8324727_8325297_8325391_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_12850.nic	chr1	-	2208	8	NIC	ENSG00000118197.14	novel	945	4	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	26.7307054198893	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCACATCAGCTTTACTT	NA	False	NA	-10	True	AATAAA	-17	NA	200669992	200640810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_200641186_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_128500.known	chr7	+	177	2	FSM	ENSG00000135164.19	ENST00000583751.1	177	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGTATGTGGCGTTTG	1671	False	NA	NA	False	ATTAAA	-39	NA	87154456	87155559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87154529_87155454
transcript_128511.known	chr7	-	1057	4	FSM	ENSG00000182165.19	ENST00000359941.11	1144	4	87	0	14	0	multi-exon	FALSE	canonical	1	2	junction_1	34.4125300177453	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTAATGATCTTCAGGT	55	False	NA	NA	False	NA	NA	NA	87345447	87325114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87329934_87330095_87341522_87341685_87345042
transcript_128518.known	chr7	-	1422	4	FSM	ENSG00000182165.19	ENST00000416560.7	1447	4	25	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	37.3303570242176	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-13	True	NA	NA	False	AATAAA	-15	NA	87345515	87324586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87341522_87341685_87345042_87345234_87345304
transcript_128524.known	chr7	-	3150	3	FSM	ENSG00000182165.19	ENST00000661943.2	3168	3	18	0	6	0	multi-exon	FALSE	canonical	3	75	junction_2	15.5	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCAACCTCACCCTTTG	-26	True	NA	NA	False	ATTAAA	-15	NA	87345528	87322942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87341522_87341685_87345042
transcript_128526.known	chr7	-	526	3	FSM	ENSG00000182165.19	ENST00000432193.7	561	3	32	3	2	2	multi-exon	FALSE	canonical	1	5	junction_2	50.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTGAGTCCTAATT	0	True	NA	-4	True	AATAAA	-18	NA	87345502	87325349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87341522_87341685_87345233
transcript_128527.known	chr7	-	1241	3	FSM	ENSG00000182165.19	ENST00000421293.3	1265	3	24	0	6	0	multi-exon	FALSE	canonical	3	52	junction_2	27	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTGTTTCTCTCTGG	-26	True	NA	NA	False	AATAAA	-12	NA	87345528	87324589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87341522_87341685_87345304
transcript_12853.nic	chr1	-	2268	8	NIC	ENSG00000118197.14	novel	945	4	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	27.3779294397543	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTGAAAAATTTGCACAT	NA	False	NA	-21	True	AATAAA	-6	NA	200669992	200640821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_200641257_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_128531.known	chr7	+	3205	18	FSM	ENSG00000005469.12	ENST00000331536.8	3205	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	9.65136202446761	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGGTGCTTTTTGA	-8	True	NA	4	True	AATAAA	-17	NA	87345663	87399794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205_87359331_87361389_87361572_87361727_87361853_87369375_87369485_87375631_87375726_87375827_87375954_87377348_87377451_87381909_87381994_87382073_87382182_87382412_87382544_87391588_87391713_87392565_87392645_87392729_87392824_87392947_87393068_87398523
transcript_128536.known	chr7	+	1213	4	FSM	ENSG00000005469.12	ENST00000412227.6	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	6.18241233033047	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTTTATCTGTATC	-2	True	NA	NA	False	ATTAAA	-20	NA	87345692	87360116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205
transcript_128543.known	chr7	-	4020	28	FSM	ENSG00000005471.19	ENST00000265723.8	4020	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	2.2704640183695	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCTGACTTGTAAAAT	285	False	NA	-4	True	AATAAA	-18	NA	87475739	87402048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87402303_87403134_87403282_87406287_87406516_87408036_87408235_87409235_87409393_87411892_87412034_87413616_87413718_87417311_87417516_87418536_87418621_87419997_87420076_87422120_87422226_87423905_87424053_87426749_87426921_87431403_87431566_87439666_87439838_87440198_87440403_87443318_87443445_87443662_87443774_87444861_87444976_87447033_87447206_87449967_87450093_87451622_87451795_87452943_87453136_87454534_87454593_87462757_87462909_87472620_87472676_87475385_87475472_87475633
transcript_128544.known	chr7	+	4099	12	FSM	ENSG00000105784.16	ENST00000338056.7	4099	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.17010832257504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTGGTCTTATTTTGC	-2	True	NA	7	True	ATTAAA	-15	NA	87628412	87832296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87628946_87650821_87650938_87693907_87693959_87700420_87700555_87710569_87710656_87739790_87739881_87741498_87741580_87770580_87770750_87777797_87777956_87807372_87807520_87816140_87816263_87829884
transcript_128545.known	chr7	+	2064	11	FSM	ENSG00000105784.16	ENST00000394654.4	4063	11	217	1782	161	58	multi-exon	FALSE	canonical	1	1	junction_8	2.60768096208106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAACGGGAAAGTT	70	False	NA	NA	False	TTTAAA	-8	NA	87628614	87830514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87628946_87650821_87650938_87700420_87700555_87710569_87710656_87739790_87739881_87741498_87741580_87770580_87770750_87777797_87777956_87807372_87807520_87816140_87816263_87829884
transcript_12855.known	chr1	-	2229	8	FSM	ENSG00000118197.14	ENST00000331314.11	2229	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	10.3292728471573	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-2	True	NA	80	True	AATAAA	-23	NA	200669907	200644036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_128556.known	chr7	+	2342	12	FSM	ENSG00000006634.8	ENST00000431138.5	2342	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	117.679702568855	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	26	True	NA	5	True	AATAAA	-24	NA	87876533	87908373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_128560.known	chr7	+	3655	12	FSM	ENSG00000006634.8	ENST00000265728.6	3655	12	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	74.1449328975363	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTTCCATTGTAAATT	-15	True	NA	NA	False	AATAAA	-28	NA	87876492	87909553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_128562.known	chr7	+	2694	12	FSM	ENSG00000006634.8	ENST00000413643.5	2694	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	125.888905503724	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	1	True	NA	8	True	AATAAA	-27	NA	87876215	87908376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900281_87900350_87900763_87900879_87904291_87904417_87907187
transcript_128563.known	chr7	-	4056	12	FSM	ENSG00000075303.13	ENST00000341119.10	4056	12	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_3	7.74916684404585	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCTGTCAACATTT	12	True	NA	-5	True	AATAAA	-18	NA	87876360	87833567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87836362_87836729_87836811_87841632_87841715_87843753_87843864_87846948_87847123_87847852_87847978_87849880_87849949_87854203_87854311_87856291_87856352_87858630_87858752_87860571_87860641_87876095
transcript_128580.nic	chr7	+	1363	11	ISM	ENSG00000006634.8	ENST00000265728.6	3655	12	-75	5138	-69	-2804	5prime_fragment	FALSE	canonical	3	186	junction_7	77.6304708217076	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTAGTTTTATCAACC	203	False	NA	NA	False	AAAAAG	-5	NA	87876417	87904415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291
transcript_128583.nnic	chr7	+	2428	11	NIC	ENSG00000006634.8	novel	2694	12	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	72	junction_10	119.193288401655	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	203	False	NA	8	True	AATAAA	-27	NA	87876417	87908376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87907187
transcript_128607.known	chr7	-	499	4	FSM	ENSG00000075303.13	ENST00000491499.1	499	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	25.4950975679639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTACTAATTGCCCTA	0	True	NA	NA	False	AAAACA	-17	NA	87876305	87856290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87856390_87858630_87858752_87860571_87860641_87876095
transcript_128608.known	chr7	+	574	3	FSM	ENSG00000006634.8	ENST00000486925.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	45.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAAGGGCTATATCCT	-17	True	NA	NA	False	NA	NA	NA	87876582	87885183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87876779_87878052_87878226_87884978
transcript_12861.nnic	chr1	-	2062	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	-85	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	27.5645706579217	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	NA	False	NA	80	True	AATAAA	-23	NA	200669992	200644036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_200644518_200648438_200648568_200649073_200649227_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_128613.known	chr7	-	1972	8	FSM	ENSG00000075142.14	ENST00000265729.7	1972	8	0	0	0	0	multi-exon	TRUE	canonical	3	2280	junction_3	169.939845299471	3077	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGCCTCATTTCACTA	14	True	NA	-6	True	AATAAA	-17	NA	88220038	88205114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_88206505_88208506_88208566_88209338_88209453_88209982_88210131_88210881_88210926_88217121_88217192_88218858_88218943_88219975
transcript_128614.known	chr7	+	442	3	FSM	ENSG00000235436.11	ENST00000479881.1	442	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTCTTCTTCTAACGA	118	False	NA	NA	False	NA	NA	NA	90119538	90124163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90119866_90122066_90122092_90124073
transcript_128617.known	chr7	+	1219	5	FSM	ENSG00000164647.9	ENST00000297205.7	1219	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	8.25757228245687	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATGTTTCTCTTTGTA	-11	True	NA	7	True	AATAAA	-16	NA	90154468	90164827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913_90162079_90164476
transcript_12862.nnic	chr1	-	1908	7	NIC	ENSG00000118197.14	novel	2229	8	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	27.5645706579217	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTTATTTCCCTTAAT	-17	True	NA	-4	True	AATAAA	-16	NA	200669922	200644120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_200644518_200648438_200648568_200649073_200649227_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_128624.known	chr7	+	3902	23	FSM	ENSG00000105792.19	ENST00000389297.8	3902	23	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	5.17323851124369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACTTCTCTTCTTTAAT	-1	True	NA	12	True	TATAAA	-20	NA	90245173	90311063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90245545_90255422_90255483_90258097_90258164_90261946_90262057_90265300_90265378_90268285_90268385_90271525_90271676_90271780_90271959_90273986_90274111_90277072_90277122_90277212_90277335_90279676_90279894_90282891_90283057_90286280_90286400_90288233_90288353_90297748_90297831_90299866_90300060_90303968_90304107_90304743_90304821_90306900_90307099_90307767_90307855_90309262_90309368_90310067
transcript_128632.nic	chr7	+	1486	2	ISM	ENSG00000105792.19	ENST00000485791.5	543	4	-21	8830	0	-8830	5prime_fragment	FALSE	canonical	3	11	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAAGTAAGTGGGTT	-1	True	NA	NA	False	TATAAA	-12	NA	90245173	90256537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_90245545_90255422
transcript_128636.nic	chr7	+	563	6	NIC	ENSG00000157224.16	novel	338	5	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	156.524758424985	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTACTTTTACATTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	90403397	90513383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_90403550_90405518_90405609_90466409_90466514_90479227_90479275_90494366_90494431_90513277
transcript_128641.known	chr7	+	338	5	FSM	ENSG00000157224.16	ENST00000483862.5	338	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	169.184810192878	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTACTTTTACATTAT	7	False	NA	NA	False	ATTAAA	-15	NA	90403518	90513383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405609_90479227_90479275_90494366_90494431_90513277
transcript_128644.known	chr7	+	3533	4	FSM	ENSG00000157224.16	ENST00000496677.6	3533	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	183.376358587711	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	10	True	NA	38	True	ATTAAA	-17	NA	90403460	90415954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405609_90412006_90412050_90412643
transcript_128645.known	chr7	+	846	4	FSM	ENSG00000157224.16	ENST00000394604.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	189.504617357995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCTTATACTATTTATT	-3	True	NA	NA	False	NA	NA	NA	90403447	90413238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405613_90412006_90412062_90412643
transcript_128646.known	chr7	+	3488	3	FSM	ENSG00000157224.16	ENST00000394605.2	3488	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	159	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	16	True	NA	38	True	ATTAAA	-17	NA	90403466	90415954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405613_90412643
transcript_12865.nic	chr1	-	1697	6	ISM	ENSG00000118197.14	ENST00000331314.11	2229	8	-85	5044	-85	1362	5prime_fragment	FALSE	canonical	3	54	junction_2	11.9766439372639	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAGGTTTGACACCCAA	NA	False	NA	NA	False	AATAGA	-13	NA	200669992	200649080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_128653.known	chr7	+	7489	10	FSM	ENSG00000105793.16	ENST00000222511.11	7489	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	25.9277248053169	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTCTCGAAATATCTT	12	True	NA	20	True	AATAAA	-17	NA	90346715	90391453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_128658.known	chr7	+	6913	9	FSM	ENSG00000105793.16	ENST00000380058.7	6913	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	45.2905550308229	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTAGTCAAGTGAATTC	3	True	NA	NA	False	AATAAA	-2	NA	90346706	90391013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_128661.known	chr7	+	775	8	FSM	ENSG00000105793.16	ENST00000417207.5	775	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	48.1765460762468	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTCCAACATATCATCC	-9	True	NA	NA	False	AAAACA	-20	NA	90346694	90384937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_128662.known	chr7	+	1740	8	FSM	ENSG00000105793.16	ENST00000257659.12	1740	8	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_2	47.4363160630403	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTAAAAATATAAAAAATTA	NA	False	NA	NA	False	NA	NA	NA	90346664	90385890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90346775_90352815_90353010_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_128669.known	chr7	+	371	4	FSM	ENSG00000273299.1	ENST00000480135.1	371	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	189.034976187536	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTACATTATGACTTGTA	-17	True	NA	NA	False	ATTAAA	-23	NA	90403433	90513391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405613_90479227_90479275_90513277
transcript_12867.nic	chr1	-	1533	5	ISM	ENSG00000118197.14	ENST00000331314.11	2229	8	-85	6406	-85	0	5prime_fragment	FALSE	canonical	3	54	junction_1	13.0192165662915	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTGAAATTTTAAATGT	NA	False	NA	NA	False	AAAAAG	-7	NA	200669992	200650442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_128670.known	chr7	+	5171	15	FSM	ENSG00000058091.17	ENST00000380050.8	5171	15	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_13	17.430474135015	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTAGGTACATCTTC	16	True	NA	22	True	AATAAA	-20	NA	90596320	91210590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90596719_90604217_90604250_90726566_90726813_90747680_90747776_90790572_90790653_90863174_90863270_90899290_90899354_90917600_90917725_90955696_90955818_90984147_90984242_91045896_91045961_91079431_91079481_91112541_91112682_91118064_91118209_91207164
transcript_128672.nnic	chr7	+	821	3	NNC	ENSG00000058091.17	novel	5171	15	NA	NA	134	-104292	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	83.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTTAGTAAATGTATGC	20	True	NA	NA	False	AATAAA	-23	NA	90596454	90622352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_90596719_90604217_90604250_90621827
transcript_128673.known	chr7	-	450	3	FSM	ENSG00000223969.7	ENST00000441971.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTGGAATCATTGCT	1524	False	NA	-2	True	AATAAA	-14	NA	90595890	90590622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_90590729_90591715_90591902_90595732
transcript_128674.known	chr7	-	449	3	FSM	ENSG00000223969.7	ENST00000412669.2	497	3	45	3	45	0	multi-exon	FALSE	canonical	2	3	junction_2	3	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTGGAATCATTGCT	61	False	NA	-2	True	AATAAA	-14	NA	90597353	90590622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_90590729_90591715_90591902_90597196
transcript_128692.nic	chr7	+	1632	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-447	69933	-409	4828	5prime_fragment	TRUE	canonical	3	17	junction_3	4.95695759225642	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAATACAGGAAAAGGA	NA	False	NA	NA	False	AATAAA	-1	NA	91940430	92000880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_128693.nic	chr7	+	1697	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-447	69868	-409	4893	5prime_fragment	FALSE	canonical	3	17	junction_3	4.95695759225642	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACTCTTGAGCTAAAGG	NA	False	NA	NA	False	ATTAAA	-25	NA	91940430	92000945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_128700.known	chr7	+	1356	7	FSM	ENSG00000127914.19	ENST00000394564.5	1356	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.28099317258495	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTGTCATTTATAA	58	False	NA	NA	False	AATACA	-15	NA	91940925	91996052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602
transcript_12871.nic	chr1	-	662	2	ISM	ENSG00000118197.14	ENST00000331314.11	2229	8	-85	22279	-85	-57	5prime_fragment	FALSE	canonical	3	71	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAGAAATCAAAACTCA	NA	False	NA	5	True	NA	NA	NA	200669992	200666315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_200666752_200669766
transcript_128713.nic	chr7	+	424	2	ISM	ENSG00000127914.19	ENST00000394564.5	1356	7	-134	22274	-48	-22274	5prime_fragment	FALSE	canonical	3	30	junction_1	0	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAACGTCAAGCAGTA	NA	False	NA	NA	False	NA	NA	NA	91940791	91973778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_91941148_91973710
transcript_128714.known	chr7	-	2642	18	ISM	ENSG00000289027.1	ENST00000692281.1	5370	26	0	19598	0	-19598	5prime_fragment	FALSE	canonical	0	0	junction_1	32.830907878259	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCTTCCAAATAATTA	-18	True	NA	NA	False	NA	NA	NA	92245924	92131773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92131873_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245135_92245789
transcript_128716.known	chr7	-	1729	10	FSM	ENSG00000001630.18	ENST00000450723.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	213.768537568841	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATCTAGGTAATTGGC	-1	True	NA	62	True	NA	NA	NA	92134803	92113411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134665
transcript_128722.known	chr7	-	3155	10	FSM	ENSG00000001630.18	ENST00000003100.13	3155	10	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_9	71.8207645616658	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTATTCATGAAT	-22	True	NA	-23	True	ATTAAA	-17	NA	92134477	92112152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134172
transcript_128725.known	chr7	-	4079	19	FSM	ENSG00000001631.17	ENST00000394505.7	4079	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_18	25.3667542705452	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-8	True	NA	NA	False	AATAAA	-19	NA	92245914	92199412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245172_92245789
transcript_12873.known	chr1	+	345	1	FSM	ENSG00000231333.2	ENST00000432390.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAAGCTTTTTTGAG	35	False	NA	NA	False	NA	NA	NA	200863807	200864152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200863800_200864200
transcript_12874.known	chr1	+	4298	10	FSM	ENSG00000163362.11	ENST00000367342.8	4298	10	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_1	34.1807107540835	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGGATGAGGGATTTT	327	False	NA	-1	True	AATAAA	-23	NA	200891340	200915735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200891702_200898306_200898456_200899472_200899598_200900103_200900221_200900936_200901160_200907833_200907888_200908729_200908941_200909223_200909398_200911452_200912138_200913536
transcript_128756.known	chr7	-	2827	17	FSM	ENSG00000001631.17	ENST00000394503.6	2827	17	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	33.6859925451218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACT	-8	True	NA	NA	False	NA	NA	NA	92245914	92200372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244901_92245172_92245789
transcript_128757.known	chr7	-	855	7	ISM	ENSG00000001631.17	ENST00000690529.1	3829	18	0	36159	0	665	5prime_fragment	FALSE	canonical	0	0	junction_5	45.5216676124922	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAAACTAATGTCATA	-14	True	NA	NA	False	NA	NA	NA	92245920	92235578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426_92245596_92245789
transcript_128760.known	chr7	-	665	3	ISM	ENSG00000001631.17	ENST00000452773.6	324	4	11	-21	-1	21	intron_retention	FALSE	canonical	0	0	junction_2	52	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGCAACAGTGAAATAAC	-9	True	NA	NA	False	AAAAAG	-31	NA	92245915	92241080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92241153_92242033_92242138_92245426
transcript_128763.nic	chr7	-	575	3	ISM	ENSG00000001631.17	ENST00000691890.1	1638	4	-88	1264	0	-39	intron_retention	FALSE	canonical	2	10	junction_2	47	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTCCCATTGAAGGACA	-17	True	NA	NA	False	NA	NA	NA	92245923	92241140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92241153_92242033_92242138_92245464
transcript_128764.known	chr7	-	783	4	ISM	ENSG00000001631.17	ENST00000458177.7	4208	19	0	42614	0	-932	5prime_fragment	FALSE	canonical	3	6	junction_3	21.9291789378647	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGAACATTTAATAATAA	NA	False	NA	NA	False	AATACA	-18	NA	92246166	92242033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92242138_92244001_92244150_92244901_92245172_92245905
transcript_128767.known	chr7	+	4571	5	FSM	ENSG00000157259.8	ENST00000287957.5	4571	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	13.2759180473518	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAACCATTCCAGTTCC	8	True	NA	NA	False	AATAAA	-29	NA	92447481	92460075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92447979_92448751_92448878_92450700_92450761_92454501_92454686_92456371
transcript_128773.known	chr7	-	2794	2	FSM	ENSG00000242950.7	ENST00000603053.2	2794	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTGGTCCATGTTTCT	0	True	NA	-3	True	ATTAAA	-14	NA	92477946	92468379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92470609_92477381
transcript_128774.known	chr7	-	4369	24	FSM	ENSG00000127980.16	ENST00000248633.9	4369	24	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_14	23.583900823906	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTATCTGTTCTTTGT	-27	True	NA	-7	True	AATAAA	-20	NA	92528520	92487024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_128776.known	chr7	+	4667	5	FSM	ENSG00000127993.16	ENST00000265732.10	4667	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	31.2759891929896	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACATAAAAAATTATTTA	1	True	NA	NA	False	AATAAA	-26	NA	92528794	92540481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536850
transcript_128779.known	chr7	+	4093	4	FSM	ENSG00000127993.16	ENST00000481551.5	4093	4	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_3	32.2937902527543	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTGGTGTGTTGTTTTC	-21	True	NA	18	True	GATAAA	-20	NA	92528772	92538005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401
transcript_128782.known	chr7	-	2434	12	FSM	ENSG00000234545.8	ENST00000438306.5	2434	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	243.847737344976	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTCTTATCAGCT	-2	True	NA	-16	True	AATAAA	-20	NA	92590393	92560792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92585297_92585397_92590267
transcript_128798.known	chr7	-	931	11	FSM	ENSG00000234545.8	ENST00000427372.5	931	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	234.104869663149	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAGAAAAATCAGGATT	-21	True	NA	NA	False	AAAAAG	-34	NA	92590070	92562281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92589859
transcript_128807.known	chr7	-	2367	11	FSM	ENSG00000234545.8	ENST00000445716.6	2367	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	221.763026674872	3102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACTTACAAAGATAAAC	1	True	NA	19	True	NA	NA	NA	92590390	92560757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_128808.known	chr7	-	1890	11	FSM	ENSG00000234545.8	ENST00000415397.6	1890	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	235.727066753057	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAGAATCTTAGTAAAT	79	False	NA	-127	True	NA	NA	NA	92590329	92561136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92566009_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577677_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_128809.known	chr7	-	2293	9	FSM	ENSG00000234545.8	ENST00000481407.5	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	204.343116779108	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACGGCTTCA	1	True	NA	NA	False	AAAAAG	-14	NA	92590390	92561215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_128810.known	chr7	-	410	3	FSM	ENSG00000234545.8	ENST00000480397.5	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	30	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAATACCTTAA	70	False	NA	NA	False	NA	NA	NA	92590338	92579154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92579396_92581505_92581604_92590267
transcript_128814.known	chr7	+	407	3	FSM	ENSG00000237819.6	ENST00000686356.1	593	3	122	64	2	-51	multi-exon	FALSE	canonical	0	0	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGCTGCCACACCG	1	True	NA	-56	True	ATTAAA	-3	NA	92836488	92917123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92836564_92854908_92854954_92916836
transcript_128816.nic	chr7	+	613	3	FSM	ENSG00000237819.6	ENST00000452050.6	520	3	-130	37	-10	-23	multi-exon	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTCCTTCACATTAAAG	741	False	NA	-28	True	ATTAAA	-31	NA	92836356	92917151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92836564_92854908_92855000_92916836
transcript_12882.nnic	chr1	+	707	3	NNC	ENSG00000229191.1	novel	2497	2	NA	NA	-38	1755	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCAACTTCTTCTTT	4234	False	NA	22	True	AATAAA	-16	NA	201023910	201030547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_201024077_201025503_201025620_201030122
transcript_128821.known	chr7	+	432	2	FSM	ENSG00000237819.6	ENST00000435695.2	433	2	1	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTGTGATCTTTTTT	-5	True	NA	8	True	ATTAAA	-18	NA	92836482	92917187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92836564_92916836
transcript_128823.known	chr7	+	406	2	ISM	ENSG00000237819.6	ENST00000452050.6	520	3	18422	37	0	-23	3prime_fragment	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTCCTTCACATTAAAG	NA	False	NA	-28	True	ATTAAA	-31	NA	92854908	92917151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_92855000_92916836
transcript_128824.known	chr7	+	5736	29	FSM	ENSG00000004766.17	ENST00000544910.5	5736	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.08428504032527	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGAATTGATGAATACA	4140	False	NA	NA	False	AATAAA	-13	NA	93232339	93361121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_93232501_93239865_93239935_93246101_93246130_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164_93276306_93291702_93291836_93294544_93294637_93296741_93296837_93297144_93297244_93303459_93303551_93305827_93306005_93308823_93308943_93311165_93311273_93323610_93323733_93334116_93334198_93341426_93341576_93348710_93348808_93349874_93350034_93353639_93353762_93355890_93356081_93358316
transcript_128825.known	chr7	+	5684	28	FSM	ENSG00000004766.17	ENST00000305866.10	5684	28	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	6.61834338303797	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATTGATGAATACAAG	-11	True	NA	NA	False	AATAAA	-15	NA	93232365	93361123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164_93276306_93291702_93291836_93294544_93294637_93296741_93296837_93297144_93297244_93303459_93303551_93305827_93306005_93308823_93308943_93311165_93311273_93323610_93323733_93334116_93334198_93341426_93341576_93348710_93348808_93349874_93350034_93353639_93353762_93355890_93356081_93358316
transcript_128832.known	chr7	+	1193	12	FSM	ENSG00000004766.17	ENST00000251739.9	1193	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	5.41500822248561	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCTCCCAAGTTGT	4140	False	NA	NA	False	AATAAA	-20	NA	93232339	93276428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164
transcript_128838.known	chr7	-	3572	14	FSM	ENSG00000004948.16	ENST00000426151.7	3572	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	10.3597994086267	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCGTCTCCTGCTCA	2	True	NA	-4	True	AATATA	-20	NA	93574724	93424485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_93426590_93434252_93434295_93435951_93436171_93438059_93438127_93438209_93438271_93443603_93443758_93460820_93460948_93468714_93468807_93472374_93472488_93477557_93477669_93479353_93479508_93486930_93487008_93574288_93574507_93574691
transcript_128846.nnic	chr7	-	2034	3	Antisense	novelGene_ENSG00000225898.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGGGTGGAGCCCACCA	NA	False	NA	NA	False	NA	NA	NA	93808743	93591278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_93591718_93793625_93793679_93807201
transcript_128848.nnic	chr7	-	931	3	Antisense	novelGene_ENSG00000225898.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAGCAGCCGGGAAGC	NA	False	NA	NA	False	NA	NA	NA	93807661	93591300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_93591625_93793531_93793679_93807201
transcript_128850.nnic	chr7	+	983	3	NNC	ENSG00000127928.13	novel	1943	4	NA	NA	-272	-102205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATACTTAG	NA	False	NA	NA	False	NA	NA	NA	93591300	93807654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_93591772_93736604_93736666_93807203
transcript_128859.nnic	chr7	+	926	2	NNC	ENSG00000127928.13	novel	1943	4	NA	NA	-276	-102205	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATACTTAG	NA	False	NA	NA	False	NA	NA	NA	93591296	93807654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_93591772_93807203
transcript_128862.known	chr7	-	1144	5	FSM	ENSG00000105825.14	ENST00000650573.1	1144	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	20.7650547796051	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACATATTTGAGAATAAAA	5	True	NA	74	True	AATATA	-13	NA	93890747	93886470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_93886897_93887260_93887432_93889016_93889224_93890136_93890320_93890590
transcript_128865.known	chr7	+	527	2	FSM	ENSG00000234695.1	ENST00000435257.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTAGCCCTTTTGTATCA	-3	True	NA	NA	False	AAAAAG	-13	NA	93890912	93893601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_93891080_93893241
transcript_128867.known	chr7	-	1481	4	FSM	ENSG00000105829.13	ENST00000222547.8	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	43.2897216438267	1703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTTAAGTCTCTTT	2	True	NA	-7	True	AATAAA	-19	NA	94004355	93993244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_93994386_93996264_93996322_93999169_93999295_94004197
transcript_128868.known	chr7	-	1031	5	FSM	ENSG00000105829.13	ENST00000433727.5	1031	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	176.369640244573	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTCGACTGTGTTACT	-4	True	NA	-22	True	AATAAA	-4	NA	94004361	93993259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_93993911_93994351_93994386_93996264_93996322_93999169_93999295_94004197
transcript_128875.known	chr7	+	5072	52	FSM	ENSG00000164692.19	ENST00000297268.11	5072	52	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.262569106984	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGAGTAAAATTCCTT	0	True	NA	32	True	AATAAA	-45	NA	94394894	94431227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94395102_94397747_94397759_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
transcript_128879.known	chr7	-	1646	13	FSM	ENSG00000127990.19	ENST00000642638.1	1646	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	93.7624065864827	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAATACAACATAACTT	-7	True	NA	NA	False	NA	NA	NA	94656127	94585365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94639340_94639449_94644605_94644668_94655989
transcript_12888.known	chr1	+	3496	2	FSM	ENSG00000229191.1	ENST00000458003.1	3496	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTACAAGTTGTGTG	6	True	NA	8	True	AATAAA	-18	NA	201023960	201028792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201024086_201025421
transcript_128880.known	chr7	-	1493	12	FSM	ENSG00000127990.19	ENST00000646119.1	1493	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.8407581506318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAATACAACATAACTT	9568	False	NA	NA	False	NA	NA	NA	94656072	94585365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94587777_94587850_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_128881.known	chr7	-	1704	12	FSM	ENSG00000127990.19	ENST00000445866.7	1704	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	86.0913410760017	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTAATGACTGGTGAAA	-26	True	NA	-23	True	AATAAA	-31	NA	94656146	94585231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94597929_94598005_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_128882.known	chr7	-	1713	12	FSM	ENSG00000127990.19	ENST00000644551.1	1713	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	86.7837628108122	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAAAGTTGATCTTTAA	-10	True	NA	-60	True	AAAACA	-22	NA	94656186	94585268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94622545_94622627_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_128883.known	chr7	-	1733	12	FSM	ENSG00000127990.19	ENST00000646489.1	1733	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	83.90303336748	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATGACTGGTGAAATT	-20	True	NA	-21	True	AATAAA	-33	NA	94656140	94585229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94639340_94639449_94655989
transcript_128884.known	chr7	-	1686	12	FSM	ENSG00000127990.19	ENST00000646559.1	1686	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	84.0679575557971	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTGATCTTTAAAATAA	3	True	NA	-55	True	AAAACA	-27	NA	94656173	94585263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94644605_94644668_94655989
transcript_128887.known	chr7	-	1868	11	FSM	ENSG00000127990.19	ENST00000648936.2	1868	11	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	28.6986062379343	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGATTGTGAAACTG	-13	True	NA	NA	False	AATAAA	-6	NA	94656133	94584979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_12889.known	chr1	+	2497	2	FSM	ENSG00000229191.1	ENST00000446333.1	2497	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	201023948	201027790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201024077_201025421
transcript_128893.known	chr7	-	1532	10	FSM	ENSG00000127990.19	ENST00000437425.7	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	61.9876530915832	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCCTAATGACTGG	-1	True	NA	-28	True	AATAAA	-26	NA	94656177	94585236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
transcript_128894.known	chr7	-	1672	10	FSM	ENSG00000127990.19	ENST00000447873.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	70.6956614171611	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-3	True	NA	-14	True	AATAAA	-40	NA	94656207	94585222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_1289.known	chr1	-	396	3	FSM	ENSG00000142599.19	ENST00000465125.1	396	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	46.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGATTAAGACTCGCACCG	6	True	NA	NA	False	NA	NA	NA	8424234	8365879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8365975_8422726_8422808_8424014
transcript_128903.nnic	chr7	-	1146	7	NIC	ENSG00000127990.19	novel	1733	12	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	81.0810636886868	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATGACTGGTGAAATT	9426	False	NA	-21	True	AATAAA	-33	NA	94656214	94585229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94655989
transcript_128904.known	chr7	-	1566	11	FSM	ENSG00000127990.19	ENST00000646098.1	1566	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	70.4369221360502	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATGACTTTATATT	7	True	NA	-85	True	NA	NA	NA	94656169	94585293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618933_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_128905.known	chr7	-	1652	11	FSM	ENSG00000127990.19	ENST00000645725.1	1652	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	103.861494308526	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTAATGAAGCCTAATGA	-4	True	NA	-32	True	AATAAA	-22	NA	94656124	94585240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94622545_94622627_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_128906.known	chr7	-	1692	9	FSM	ENSG00000127990.19	ENST00000643128.1	1692	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	24.4511630602718	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTAATCTAAATTT	-25	True	NA	NA	False	ATTAAA	-15	NA	94656145	94598382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_128907.known	chr7	-	1359	9	FSM	ENSG00000127990.19	ENST00000643206.1	1359	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	75.8237058907041	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-28	True	NA	-14	True	AATAAA	-40	NA	94656148	94585222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94655989
transcript_128908.known	chr7	-	1745	13	FSM	ENSG00000127990.19	ENST00000643610.1	1745	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.5819892378615	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACTTTATATTTGTTA	9487	False	NA	-80	True	AAAACA	-2	NA	94656153	94585288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94597748_94597840_94597929_94598005_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_128910.known	chr7	+	3931	18	FSM	ENSG00000127995.17	ENST00000297273.9	3931	18	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_9	29.8983282910947	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGATCCATTCATGATT	-31	True	NA	39	True	ATTAAA	-24	NA	94509808	94557019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94510218_94517559_94517657_94518202_94518324_94527161_94527207_94528187_94528251_94533204_94533250_94533678_94533803_94535308_94535524_94537471_94537895_94538966_94539057_94544410_94544531_94545544_94545702_94547095_94547176_94549532_94549635_94551337_94551479_94552349_94552428_94554482_94554576_94555491
transcript_128914.known	chr7	+	2263	3	FSM	ENSG00000127995.17	ENST00000471944.5	2263	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	10.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGTATTGGCAAAGT	NA	False	NA	-14	True	AATAAA	-16	NA	94551732	94556966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94552428_94554482_94554576_94555491
transcript_128916.known	chr7	+	6394	2	FSM	ENSG00000242265.6	ENST00000615790.5	6394	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCCTGATCATTT	176	False	NA	27	True	AATAAA	-30	NA	94656545	94669692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94656581_94663333
transcript_128917.known	chr7	+	2587	2	FSM	ENSG00000242265.6	ENST00000488574.5	2587	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGATCTCTGCCCTCAAA	0	True	NA	NA	False	NA	NA	NA	94656369	94665698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94656592_94663333
transcript_128918.known	chr7	-	793	1	FSM	ENSG00000232385.2	ENST00000411660.1	793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	176	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCAGACTTCAAATGG	17	False	NA	NA	False	NA	NA	NA	94695819	94695026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94695000_94695800
transcript_128922.nic	chr7	+	463	2	ISM	ENSG00000158528.12	ENST00000424654.5	4058	18	-81	380104	0	14	5prime_fragment	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGAGGGCTCCCAGCA	-43	True	NA	NA	False	AAAACA	-4	NA	94907593	94910251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_94907703_94909897
transcript_128923.known	chr7	+	9928	16	FSM	ENSG00000158528.12	ENST00000433881.5	9928	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	7.80484180208386	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTGAAGCAATTTTTTT	38	False	NA	15	True	AATAAA	-15	NA	94908278	95296402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94908595_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95225960_95226117_95247472_95247527_95250025_95250256_95251761_95251859_95251958_95252131_95268549_95268708_95286205_95286326_95287109_95287134_95288535_95288719_95290090
transcript_128925.known	chr7	-	2393	9	FSM	ENSG00000005421.9	ENST00000222381.8	2393	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTACAGGCACACACCAC	-1	True	NA	NA	False	NA	NA	NA	95324532	95297675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_95299103_95302204_95302334_95306284_95306367_95308010_95308212_95311450_95311578_95315321_95315491_95316733_95316790_95318322_95318394_95324401
transcript_128928.known	chr7	-	1726	9	FSM	ENSG00000105854.13	ENST00000433091.6	1726	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	125.903174602549	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	186	False	NA	NA	False	ATTAAA	-19	NA	95435198	95404879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_128929.nnic	chr7	-	1584	9	NNC	ENSG00000105854.13	novel	1610	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_6	135.767206552245	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCTGTGTTTAATTC	-25	True	NA	NA	False	ATTAAA	-37	NA	95435028	95404861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412452_95416241_95416298_95424514_95424586_95434877
transcript_128931.known	chr7	-	1876	9	FSM	ENSG00000105854.13	ENST00000633192.1	1876	9	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_6	73.0529559634653	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGGAGTTATATTAAAGA	55	False	NA	NA	False	ATTAAA	-2	NA	95435329	95404896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_128934.known	chr7	-	1515	9	FSM	ENSG00000105854.13	ENST00000455123.5	1515	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	151.016348452742	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTTTTGTCTGTGTTT	12	True	NA	NA	False	ATTAAA	-32	NA	95434991	95404866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409953_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_12894.known	chr1	-	545	6	FSM	ENSG00000116857.17	ENST00000414605.2	545	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	569.582513776538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	19	True	NA	NA	False	NA	NA	NA	201154464	201135800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153782_201153960_201154444
transcript_128940.nic	chr7	+	1157	3	ISM	ENSG00000158560.14	ENST00000519371.1	774	7	-141	49942	-141	-49942	5prime_fragment	FALSE	canonical	1	3	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAGGGACATGAAATA	NA	False	NA	NA	False	AAAAAG	-6	NA	95837476	95978379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_95837650_95869882_95869999_95977511
transcript_128941.nic	chr7	+	1667	2	ISM	ENSG00000158560.14	ENST00000519371.1	774	7	-141	156945	-141	43248	5prime_fragment	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATACAAAATTAGAAAA	NA	False	NA	NA	False	AATACA	-32	NA	95837476	95871376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_95837650_95869882
transcript_128945.known	chr7	-	3192	18	FSM	ENSG00000004864.14	ENST00000416240.6	3192	18	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_9	111.549576236208	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTTGTTTGGTCTTGT	4628	False	NA	-4	True	AATAAA	-15	NA	96322147	96120220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185015_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_12895.known	chr1	-	938	6	FSM	ENSG00000116857.17	ENST00000485839.6	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	535.26643832768	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGGCTACTTCTCCCTT	50	False	NA	-81	True	NA	NA	NA	201154433	201135598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154147
transcript_128957.nic	chr7	-	1129	6	ISM	ENSG00000004864.14	ENST00000265631.10	3141	18	-20	72465	18	463	5prime_fragment	FALSE	canonical	3	391	junction_1	31.7930810082949	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCACATGTATATCATT	4657	False	NA	NA	False	NA	NA	NA	96322118	96192684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_128959.nic	chr7	-	839	6	ISM	ENSG00000004864.14	ENST00000265631.10	3141	18	-20	72755	18	173	5prime_fragment	FALSE	canonical	3	391	junction_1	31.7930810082949	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATAAGTTATGTAGTG	4657	False	NA	-12	True	AGTAAA	-20	NA	96322118	96192974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_128965.known	chr7	-	568	5	FSM	ENSG00000004864.14	ENST00000472162.2	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	176.176580452681	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGGGACAATGCTAGGAC	-6	True	NA	NA	False	AATACA	-29	NA	96322136	96193147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_96193184_96208837_96208978_96277195_96277339_96296897_96296952_96321941
transcript_128966.nic	chr7	-	957	5	ISM	ENSG00000004864.14	ENST00000265631.10	3141	18	-20	88291	18	-15363	5prime_fragment	FALSE	canonical	3	418	junction_1	27.1696061804363	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGTTAAAAGGGTAAAT	4657	False	NA	NA	False	NA	NA	NA	96322118	96208510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_128973.nic	chr7	-	642	2	ISM	ENSG00000004864.14	ENST00000472162.2	568	5	18	103339	18	411	5prime_fragment	FALSE	canonical	3	427	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAATCCCAACATGT	4657	False	NA	NA	False	AAGAAA	-9	NA	96322118	96296486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_96296952_96321941
transcript_128989.known	chr7	-	1590	3	FSM	ENSG00000127922.10	ENST00000444799.5	1590	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4105	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGAATTTCCATTCAC	12	True	NA	NA	False	AATAAA	-19	NA	96709858	96649194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_96650520_96694797_96694892_96709687
transcript_12899.known	chr1	-	507	6	FSM	ENSG00000116857.17	ENST00000435310.5	507	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	552.361620679786	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	65	False	NA	NA	False	NA	NA	NA	201154418	201135800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154361
transcript_128990.known	chr7	-	1314	3	FSM	ENSG00000127922.10	ENST00000248566.4	458	3	-45	-811	-11	811	multi-exon	FALSE	canonical	3	7433	junction_1	388.5	30141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGCATAAATATGTTT	NA	False	NA	NA	False	AATACA	-19	NA	96709891	96687950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_96688967_96694797_96694892_96709687
transcript_128991.known	chr7	-	1418	3	FSM	ENSG00000105880.7	ENST00000648378.1	1418	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGAATGTTTCTGAAAAAT	-2	True	NA	NA	False	AATAAA	-20	NA	97024831	97020395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97021066_97022184_97022370_97024268
transcript_128999.known	chr7	+	731	3	FSM	ENSG00000196636.8	ENST00000360382.4	731	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCATATTAGTCTTCT	-1	True	NA	NA	False	TTTAAA	-13	NA	97117722	97181487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97117898_97136387_97136468_97181011
transcript_12900.known	chr1	-	1544	6	FSM	ENSG00000116857.17	ENST00000367332.5	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	547.477341996909	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGGTTTTTAAGAGA	-18	True	NA	-4	True	ATTAAA	-17	NA	201154501	201134772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153848_201153960_201154444
transcript_129000.nic	chr7	+	1151	3	NIC	ENSG00000196636.8	novel	952	2	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	81	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTCCTCCAGTGTTTG	10	False	NA	16	True	AATAAA	-16	NA	97117644	97181763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_97117898_97142672_97142819_97181011
transcript_129007.known	chr7	+	952	2	FSM	ENSG00000196636.8	ENST00000432641.3	952	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTCCTCCAGTGTTTG	1	True	NA	16	True	AATAAA	-16	NA	97117697	97181763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97117898_97181011
transcript_129009.known	chr7	+	1061	7	FSM	ENSG00000006128.12	ENST00000319273.10	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.3748384988657	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCACATGTCTTT	1	True	NA	14	True	AATAAA	-18	NA	97732085	97740472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734247_97734293_97734825_97734850_97736298_97736353_97739873
transcript_12901.known	chr1	-	1564	6	FSM	ENSG00000116857.17	ENST00000367333.6	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	566.280990321943	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	35	False	NA	-3	True	ATTAAA	-18	NA	201171574	201134771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201171489
transcript_129013.known	chr7	+	975	6	FSM	ENSG00000006128.12	ENST00000350485.8	975	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.0742945599257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAACATTTTAAATAAAAGA	-1	True	NA	-20	True	NA	NA	NA	97732083	97740438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734247_97734293_97734825_97734850_97739873
transcript_129014.known	chr7	+	1011	6	FSM	ENSG00000006128.12	ENST00000346867.4	1011	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	11.5861986863682	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAGATTTTTGTCACA	-1	True	NA	7	True	AATAAA	-11	NA	97732083	97740465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734825_97734850_97736298_97736353_97739873
transcript_129023.nnic	chr7	-	647	2	NNC	ENSG00000284707.2	novel	3743	18	NA	NA	-13	13575	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	37	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	7	True	NA	NA	False	AATAAA	-19	NA	97928424	97922779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_97923084_97928081
transcript_129027.known	chr7	-	2356	14	FSM	ENSG00000070669.17	ENST00000175506.8	2356	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	221.748484848362	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTATGTTCATGCAG	NA	False	NA	-4	True	AATAAA	-26	NA	97872542	97852117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718_97871997_97872350
transcript_129033.known	chr7	-	1812	13	FSM	ENSG00000070669.17	ENST00000444334.5	1812	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	160.579592587463	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGATAGGGGAACAA	15	True	NA	-90	True	NA	NA	NA	97872436	97852203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97869777_97869814_97872350
transcript_129034.known	chr7	-	2289	13	FSM	ENSG00000070669.17	ENST00000394309.7	2289	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	174.017400151696	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGCTGTAGTCATTTAT	-2	True	NA	-14	True	AATAAA	-16	NA	97872131	97852127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718
transcript_129036.known	chr7	-	2385	13	FSM	ENSG00000070669.17	ENST00000394308.8	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_10	67.7390315024424	2402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTTGTGGACCTC	0	True	NA	NA	False	AATAAA	-18	NA	97872408	97851676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
transcript_129042.known	chr7	-	1865	12	FSM	ENSG00000070669.17	ENST00000422745.5	1865	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	184.275978802546	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCCTAAATCTAAACC	-16	True	NA	-32	True	NA	NA	NA	97872467	97852145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97872350
transcript_129054.known	chr7	-	1588	11	FSM	ENSG00000070669.17	ENST00000455086.5	1588	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	189.695967273951	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTCCTAAATC	57	False	NA	-38	True	NA	NA	NA	97872394	97852151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97872350
transcript_129055.known	chr7	-	1947	12	FSM	ENSG00000070669.17	ENST00000454046.5	1947	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	182.714563103897	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTGCTGTAGTCATT	2638	False	NA	-17	True	AATAAA	-13	NA	97869813	97852130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854755_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777
transcript_129056.known	chr7	-	828	5	FSM	ENSG00000070669.17	ENST00000442734.5	828	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	243.491657967989	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATGACAATGTGGAGAAAC	-2	True	NA	NA	False	NA	NA	NA	97872165	97859241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872040
transcript_129062.nnic	chr7	-	953	4	Fusion	ENSG00000243554.1_ENSG00000183444.10	novel	447	6	NA	NA	-108	-287	multi-exon	FALSE	canonical	3	82	junction_1	34.4770455037358	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTCTTTCTCTAAAAT	974	False	NA	30	True	NA	NA	NA	97972362	97966376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_129065.nnic	chr7	-	734	4	Fusion	ENSG00000243554.1_ENSG00000183444.10	novel	447	6	NA	NA	-108	-506	multi-exon	FALSE	canonical	3	82	junction_1	34.4770455037358	101	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTAGTTTTGTTGTCTT	974	False	NA	-18	True	NA	NA	NA	97972362	97966595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_97966978_97969004_97969053_97969769_97969846_97972134
transcript_129078.known	chr7	+	667	3	FSM	ENSG00000164713.10	ENST00000456357.6	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	90	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	19	False	NA	17	True	AATAAA	-17	NA	98252378	98291524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_98252529_98282350_98282454_98291110
transcript_129079.nnic	chr7	+	659	3	NNC	ENSG00000164713.10	novel	667	3	NA	NA	-25	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	94	322	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	-6	True	NA	17	True	AATAAA	-17	NA	98252353	98291524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_98252496_98282350_98282454_98291110
transcript_129080.nnic	chr7	+	627	3	NNC	ENSG00000164713.10	novel	567	3	NA	NA	-450	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	94	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	NA	False	NA	17	True	AATAAA	-17	NA	98281216	98291524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_98281327_98282350_98282454_98291110
transcript_129081.known	chr7	+	790	3	FSM	ENSG00000164713.10	ENST00000297290.4	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	23	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCTTTCAGAGACCCAG	4	True	NA	38	True	AATAAA	-38	NA	98281685	98291545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_98281938_98282350_98282454_98291110
transcript_129084.known	chr7	-	784	1	FSM	ENSG00000214389.2	ENST00000398259.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	914	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAAGTTCAGACTTCA	25	False	NA	NA	False	NA	NA	NA	98386584	98385800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_98385800_98386600
transcript_129086.known	chr7	+	2713	5	FSM	ENSG00000106236.4	ENST00000265634.4	2713	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	1.4790199457749	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTGTTTGTCTTCCTC	0	True	NA	13	True	ATTAAA	-16	NA	98617284	98629869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_98617888_98619642_98619860_98624921_98625167_98627164_98627345_98628401
transcript_129091.nic	chr7	+	558	2	ISM	ENSG00000196367.14	ENST00000456197.2	12675	73	47	131653	47	-8811	5prime_fragment	FALSE	canonical	3	14	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATGCATAAATATGACA	32	False	NA	NA	False	AAAAAG	-1	NA	98878578	98881588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_98878638_98881089
transcript_129092.known	chr7	-	5668	18	FSM	ENSG00000198742.10	ENST00000361368.7	5668	18	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_2	24.3926927625388	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGGCGTCTGTTATT	15	True	NA	-17	True	AATAAA	-13	NA	99144108	99027439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_129095.known	chr7	+	1578	11	FSM	ENSG00000130429.15	ENST00000427217.6	1578	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	290.958158503933	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	0	True	NA	NA	False	AATAAA	-35	NA	99374729	99394801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377357_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_129097.known	chr7	+	1505	11	FSM	ENSG00000130429.15	ENST00000458033.6	1505	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	289.175794284376	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	0	True	NA	NA	False	NA	NA	NA	99374729	99394712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377357_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_129099.known	chr7	+	1582	10	FSM	ENSG00000241685.10	ENST00000262942.10	1582	10	0	0	0	0	multi-exon	TRUE	canonical	3	807	junction_7	76.5024005110338	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTGTTTCCTTGT	-15	True	NA	18	True	AATAAA	-15	NA	99325897	99366262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99326005_99333324_99333418_99338180_99338286_99344292_99344516_99348851_99348960_99353908_99354122_99358339_99358416_99359544_99359739_99363542_99363634_99365890
transcript_129113.known	chr7	+	1511	10	FSM	ENSG00000130429.15	ENST00000646101.2	1511	10	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	41.8678107888019	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTATGTGGAAGGAGA	0	True	NA	NA	False	AAAAAG	-15	NA	99374729	99394816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_129114.known	chr7	+	1669	11	FSM	ENSG00000130429.15	ENST00000645391.1	1669	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	288.976210093495	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	360	False	NA	NA	False	AATAAA	-35	NA	99374674	99394801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377337_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_129115.known	chr7	+	945	5	FSM	ENSG00000130429.15	ENST00000481997.5	945	5	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_4	9.42072184070839	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTAATTATGGACA	2694	False	NA	NA	False	AATAAA	-28	NA	99390871	99394794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_129116.known	chr7	-	2604	6	FSM	ENSG00000106244.13	ENST00000350498.8	2604	6	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_5	94.3046128246121	11824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTATTCCTTGAATAG	-11	True	NA	NA	False	AATAAA	-20	NA	99408597	99394672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
transcript_129117.known	chr7	+	1556	11	FSM	ENSG00000130429.15	ENST00000455009.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	293.949655553464	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCATGAACTGCTTCAAAA	-3	True	NA	NA	False	NA	NA	NA	99374706	99394732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377333_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_129118.known	chr7	-	767	6	FSM	ENSG00000106244.13	ENST00000426447.3	767	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	306.385769904544	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGGGATGGGGGGGGGGA	-4	True	NA	NA	False	NA	NA	NA	99408590	99396522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403526_99404861_99404954_99408535
transcript_129119.known	chr7	-	120	3	FSM	ENSG00000106244.13	ENST00000626285.1	120	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	284	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGGAAGAAGAGGAGCAA	277	False	NA	NA	False	NA	NA	NA	99408548	99403510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99403526_99404861_99404954_99408535
transcript_129120.known	chr7	+	1715	12	FSM	ENSG00000130429.15	ENST00000451682.5	1715	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	327.448361962716	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGTAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	AATAAA	-10	NA	99374729	99394776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99376432_99376575_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_129121.known	chr7	+	1509	11	FSM	ENSG00000130429.15	ENST00000431816.6	1509	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	290.760107304974	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	0	True	NA	NA	False	NA	NA	NA	99374729	99394712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_129129.known	chr7	+	1823	8	FSM	ENSG00000160917.15	ENST00000292476.10	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_6	203.662686312241	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTCTCATTAATTAAG	-8	True	NA	27	True	ATTAAA	-14	NA	99438942	99457373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99453965_99454137_99456431
transcript_12913.known	chr1	-	1994	5	FSM	ENSG00000116857.17	ENST00000367330.6	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_4	67.0125921002911	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	9	True	NA	-3	True	ATTAAA	-18	NA	201154474	201134771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857
transcript_129130.known	chr7	+	1738	8	FSM	ENSG00000160917.15	ENST00000436336.6	1738	8	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_6	182.726962589386	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAAATGGATTAAAGC	-29	True	NA	-4	True	NA	NA	NA	99438921	99457342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_129132.known	chr7	+	942	8	FSM	ENSG00000160917.15	ENST00000441580.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	342.556654036219	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGAGCTGGCCCGCAGA	-35	True	NA	NA	False	NA	NA	NA	99439375	99456589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99439597_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_129136.known	chr7	-	5464	8	FSM	ENSG00000106246.18	ENST00000292478.9	5464	8	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	13.5526185435788	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-36	True	NA	NA	False	NA	NA	NA	99438798	99416738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99433277_99433419_99434789_99435269_99438691
transcript_129152.known	chr7	-	443	4	FSM	ENSG00000241468.8	ENST00000292475.8	443	4	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_3	1992.21200344408	13565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	0	True	NA	-36	True	AATAAA	-13	NA	99466167	99458194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466110
transcript_129160.known	chr7	-	323	3	FSM	ENSG00000241468.8	ENST00000359832.8	323	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	817	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	3	True	NA	-36	True	AATAAA	-13	NA	99466164	99458194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99460085_99460194_99466110
transcript_129167.known	chr7	-	584	2	FSM	ENSG00000241468.8	ENST00000524321.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGAGGATTGCTTGAGC	3	True	NA	NA	False	NA	NA	NA	99466164	99459663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99460194_99466110
transcript_129168.known	chr7	+	1052	6	FSM	ENSG00000106245.11	ENST00000222969.10	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	296.229370589751	4941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	16	True	NA	17	True	AATAAA	-18	NA	99408968	99419616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99409246_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_129169.known	chr7	+	1139	6	FSM	ENSG00000106245.11	ENST00000403633.6	1139	6	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_1	254.984234806782	5533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	14	True	NA	17	True	AATAAA	-18	NA	99408640	99419616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99409005_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_12917.known	chr1	-	1135	16	FSM	ENSG00000118194.21	ENST00000367318.10	1135	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.4343053932412	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTCTGTCACGTCC	0	True	NA	-14	True	AATAAA	-18	NA	201377680	201359013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_129170.known	chr7	+	608	4	FSM	ENSG00000106245.11	ENST00000431419.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	512.874903525866	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTGATTTGTAAAAATA	6114	False	NA	-22	True	NA	NA	NA	99415135	99419577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99415267_99416137_99416261_99417428_99417596_99419390
transcript_129171.known	chr7	-	306	3	FSM	ENSG00000241468.8	ENST00000488775.5	306	3	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	1859	2538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGCTGATTGCCTGC	0	True	NA	-38	True	AATAAA	-11	NA	99466167	99458196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99460085_99460194_99466128
transcript_129172.known	chr7	-	460	4	FSM	ENSG00000241468.8	ENST00000449683.5	460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2967.96574553459	5920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGATTGCCTGCCTGTCTG	0	True	NA	-31	True	AATAAA	-18	NA	99466167	99458189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460224_99466128
transcript_129173.known	chr7	-	305	4	FSM	ENSG00000241468.8	ENST00000394186.3	305	4	0	0	0	0	multi-exon	FALSE	canonical	3	4163	junction_3	1022.39337939084	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCACCCCACGACCTTG	6	True	NA	-150	True	NA	NA	NA	99466161	99458308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466128
transcript_129174.known	chr7	-	774	2	FSM	ENSG00000241468.8	ENST00000466753.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAGAT	2	True	NA	NA	False	TTTAAA	-4	NA	99466165	99448474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99449194_99466110
transcript_129177.known	chr7	+	5083	7	FSM	ENSG00000196652.12	ENST00000326775.10	5083	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.3776282653032	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTGGAGAGATGGTA	-1	True	NA	NA	False	NA	NA	NA	99504661	99534700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99504734_99506004_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_12918.known	chr1	-	1330	16	FSM	ENSG00000118194.21	ENST00000509001.5	1330	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	33.3843609427462	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCACCACACACTGA	8611	False	NA	-34	True	NA	NA	NA	201377762	201359033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373402_201377622
transcript_129188.known	chr7	+	1616	5	FSM	ENSG00000198556.14	ENST00000331410.10	1616	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	12.7744862910412	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTTTGTGTAGCCAAT	1	True	NA	14	True	AATAAA	-26	NA	99472889	99487605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99484029_99484144_99486475
transcript_129196.known	chr7	+	5626	5	FSM	ENSG00000196652.12	ENST00000454175.1	5626	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	31.1608729017658	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTGGAGAGATGGTA	-3	True	NA	NA	False	NA	NA	NA	99505253	99534700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99506459_99512452_99512592_99519826_99519910_99525812_99526419_99531107
transcript_129200.known	chr7	+	2994	4	FSM	ENSG00000198556.14	ENST00000483089.5	2994	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	11.5758369027902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	1	True	NA	NA	False	AATAAA	-21	NA	99472889	99482326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660
transcript_129202.known	chr7	+	510	4	FSM	ENSG00000198556.14	ENST00000379724.3	510	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	12.4988888395018	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGTGCCAATCTCT	0	True	NA	NA	False	AATAAA	-17	NA	99472911	99482322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99482162
transcript_129203.nic	chr7	+	632	4	NIC	ENSG00000198556.14	novel	842	7	NA	NA	-96	-244	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	12.4988888395018	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGCCAATCTCTATTC	6544	False	NA	NA	False	AATAAA	-21	NA	99472793	99483902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_99473057_99476402_99476481_99479660_99479788_99483738
transcript_129205.nnic	chr7	+	1311	4	NNC	ENSG00000198556.14	novel	2994	4	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	11.0855260988773	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	6544	False	NA	NA	False	AATAAA	-21	NA	99472793	99482326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_99473057_99476402_99476481_99479660_99480039_99481734
transcript_129213.known	chr7	+	1884	3	FSM	ENSG00000198556.14	ENST00000488485.5	1884	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGCATGAATTTTT	3	True	NA	NA	False	AATAGA	-12	NA	99472891	99481301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99479660
transcript_12922.known	chr1	-	1156	16	FSM	ENSG00000118194.21	ENST00000422165.6	1156	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	28.9654199961878	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTCTGTCACGTCC	0	True	NA	-14	True	AATAAA	-18	NA	201377680	201359013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_129221.nic	chr7	-	1283	3	ISM	ENSG00000160908.15	ENST00000651364.1	5731	5	-115	12642	-24	0	5prime_fragment	FALSE	canonical	2	3	junction_1	39.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGAGTTAGCTTTTT	NA	False	NA	0	True	NA	NA	NA	99500348	99486518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_99486964_99498715_99498843_99499637
transcript_129227.known	chr7	-	2163	3	FSM	ENSG00000160908.15	ENST00000337673.7	2163	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	4	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGACTTGGCCTGTT	-5	True	NA	-8	True	AATAAA	-22	NA	99500281	99493239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99494632_99498715_99498843_99499637
transcript_129231.nnic	chr7	+	1492	2	NNC	ENSG00000198556.14	novel	411	2	NA	NA	15932	532	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	NA	False	NA	NA	False	AATAAA	-16	NA	99499961	99501551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_99500625_99500722
transcript_129232.known	chr7	-	2017	2	FSM	ENSG00000160908.15	ENST00000426306.2	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATGTGACTTGGCCTG	12	True	NA	-10	True	AATAAA	-20	NA	99500264	99493241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99494632_99499637
transcript_129233.known	chr7	-	325	2	FSM	ENSG00000160908.15	ENST00000464401.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCTCTGTACTGCTAG	572	False	NA	-104	True	NA	NA	NA	99499704	99498584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99498843_99499637
transcript_129239.known	chr7	+	1601	5	FSM	ENSG00000197343.11	ENST00000320583.9	1601	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	59.1623824740012	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	5	True	NA	21	True	NA	NA	NA	99558405	99564705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99558788_99560532_99560696_99561887_99561974_99562367_99562495_99563862
transcript_129247.known	chr7	+	1979	4	FSM	ENSG00000197343.11	ENST00000467680.5	1979	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	63.7704215656966	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	21	False	NA	21	True	NA	NA	NA	99558421	99564705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99558788_99560532_99560696_99561887_99562495_99563862
transcript_12925.known	chr1	-	1182	15	NNC	ENSG00000118194.21	novel	1156	16	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	28.0509740090633	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTCACGTCCCCTTC	8673	False	NA	-9	True	AATAAA	-23	NA	201377700	201359008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372046_201373205_201373269_201377622
transcript_129252.known	chr7	+	545	3	FSM	ENSG00000197343.11	ENST00000452314.5	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	64.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCCTGCTCGGAAACTCC	13	True	NA	NA	False	NA	NA	NA	99558566	99564023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99558788_99560532_99560696_99563862
transcript_129253.known	chr7	+	1198	3	FSM	ENSG00000197343.11	ENST00000440391.5	1198	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	-24	True	NA	21	True	NA	NA	NA	99558825	99564705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99559018_99560532_99560696_99563862
transcript_129255.known	chr7	-	2468	2	FSM	ENSG00000221909.3	ENST00000449309.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTTCTACATAGTA	-2	True	NA	-16	True	AATAAA	-20	NA	99552114	99546299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99548507_99551853
transcript_129259.known	chr7	+	4518	3	FSM	ENSG00000197343.11	ENST00000252713.9	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	44	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTCAAACAAAATCTG	-16	True	NA	23	True	AATAAA	-23	NA	99558641	99576453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99558788_99560532_99560696_99572244
transcript_129263.known	chr7	+	4352	8	FSM	ENSG00000197037.11	ENST00000394152.7	4352	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	11.8528391501095	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTCTGTCCACTCCT	-12	True	NA	NA	False	TATAAA	-17	NA	99616945	99632408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_129272.known	chr7	+	558	4	FSM	ENSG00000197037.11	ENST00000493443.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	30.3021818063027	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCGTCAGGCACCAGCG	-5	True	NA	NA	False	NA	NA	NA	99616952	99629468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99617017_99622548_99622641_99624056_99624181_99629190
transcript_129276.nnic	chr7	-	772	5	Antisense	novelGene_ENSG00000021461.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTTGGCTCTTTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	99843026	99829283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_99829558_99830257_99830516_99831489_99831618_99838443_99838463_99842933
transcript_129279.nnic	chr7	-	758	4	Antisense	novelGene_ENSG00000021461.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTTGGCTCTTTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	99843027	99829283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_99829558_99830257_99830516_99831489_99831618_99842929
transcript_12928.known	chr1	-	1108	15	FSM	ENSG00000118194.21	ENST00000412633.3	1108	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	27.2205654546975	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGGCATTTCTGTCAC	8707	False	NA	-18	True	AATAAA	-14	NA	201377666	201359017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_129283.nnic	chr7	-	916	4	NNC	ENSG00000176402.6	novel	1119	2	NA	NA	-4845	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	10.2089285540757	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	9843	False	NA	0	True	AATAAA	-20	NA	99934465	99923265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_99923604_99928839_99928915_99929380_99929622_99934203
transcript_129286.nnic	chr7	-	1222	3	NNC	ENSG00000176402.6	novel	1119	2	NA	NA	-4685	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	11.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	NA	False	NA	0	True	AATAAA	-20	NA	99934305	99923265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_99923604_99928839_99929622_99934203
transcript_129288.known	chr7	-	1119	2	FSM	ENSG00000176402.6	ENST00000312891.3	1119	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	4631	False	NA	0	True	AATAAA	-20	NA	99929620	99923265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99923604_99928839
transcript_129289.known	chr7	-	1181	4	FSM	ENSG00000160862.13	ENST00000292401.9	1181	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGAGAATCCTTTTTTT	-1	True	NA	NA	False	AATAAA	-24	NA	99976031	99966729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99967287_99968154_99968431_99971745_99972007_99975944
transcript_12929.known	chr1	-	1007	15	FSM	ENSG00000118194.21	ENST00000367320.6	1007	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	33.2188936895735	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGACTGGCATTTC	8712	False	NA	-24	True	AATAAA	-8	NA	201377661	201359023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365609_201365671_201366837_201366872_201367770_201367804_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_129291.nnic	chr7	+	1101	4	NNC	ENSG00000286923.2	novel	656	4	NA	NA	-7	-2363	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.02768199119819	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGGGCAGGGCGGGCA	-21	True	NA	NA	False	AAAAAG	-1	NA	99997682	100009266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_99997787_99999382_99999493_100008120_100008323_100008581
transcript_129292.known	chr7	+	656	4	FSM	ENSG00000286923.2	ENST00000671037.1	656	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.71404520791032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAATAATTTGTTTTG	-14	True	NA	NA	False	AATAAA	-30	NA	99997689	100011634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99997787_99999382_99999493_100008132_100008323_100011375
transcript_129300.nnic	chr7	+	473	3	NIC	ENSG00000286923.2	novel	656	4	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	1.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAATAATTTGTTTTG	-21	True	NA	NA	False	AATAAA	-30	NA	99997682	100011634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_99997787_99999382_99999493_100011375
transcript_129304.nnic	chr7	+	603	3	NNC	ENSG00000286923.2	novel	656	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAATAATTTGTTTTG	-14	True	NA	NA	False	AATAAA	-30	NA	99997689	100011634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_99997924_99999382_99999493_100011375
transcript_129307.known	chr7	+	9403	6	FSM	ENSG00000106261.17	ENST00000324306.11	9403	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	13.7753402861781	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	-6	True	NA	26	True	AATAAA	-20	NA	100015595	100041689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100033304
transcript_129311.nnic	chr7	+	1585	6	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	-11	0	intron_retention	FALSE	canonical	1	4	junction_5	26.6608326951729	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	7	False	NA	26	True	AATAAA	-20	NA	100015584	100041689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100041133
transcript_129312.nnic	chr7	+	1801	6	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	-11	3866	intron_retention	FALSE	canonical	1	2	junction_5	27.3978101314685	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATTGTCCAGC	7	False	NA	NA	False	NA	NA	NA	100015584	100045555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100044783
transcript_129315.nnic	chr7	+	1010	4	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	-11	-6	intron_retention	FALSE	canonical	0	0	junction_3	36.021598459196	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCATGCTTGTTTTTTGT	7	False	NA	NA	False	ATTAAA	-24	NA	100015584	100024954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100015727_100023418_100023933_100024153_100024308_100024754
transcript_129316.known	chr7	+	1449	3	FSM	ENSG00000106261.17	ENST00000482979.5	1449	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	11	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTTTTTTGTTTTTAG	-3	True	NA	NA	False	ATTAAA	-30	NA	100015598	100024960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100015727_100023418_100023933_100024153
transcript_129318.nic	chr7	+	1678	2	ISM	ENSG00000106261.17	ENST00000482979.5	1449	3	-14	6	-11	-6	intron_retention	FALSE	canonical	3	85	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCATGCTTGTTTTTTGT	7	False	NA	NA	False	ATTAAA	-24	NA	100015584	100024954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_100015727_100023418
transcript_129322.nic	chr7	+	2045	6	NIC	ENSG00000166529.16	novel	1904	5	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	52.8900746832522	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCAGGACTATTATT	9767	False	NA	7	True	AATAAA	-16	NA	100049765	100065038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787_100063980_100064082
transcript_129325.known	chr7	-	1441	6	FSM	ENSG00000166526.18	ENST00000413658.6	1441	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	78.4561023757872	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATATAACGTCTCTCTC	-4	True	NA	NA	False	ACTAAA	-19	NA	100081727	100064032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100064913_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_129326.known	chr7	-	2797	6	FSM	ENSG00000166526.18	ENST00000299667.9	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	28.7304716285689	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGTGGTTTTGTGC	0	True	NA	-2	True	ATTAAA	-21	NA	100081723	100069972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_129327.known	chr7	-	999	6	FSM	ENSG00000166526.18	ENST00000428683.5	999	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	74.0043241979818	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	7498	False	NA	NA	False	AATATA	-32	NA	100082548	100071929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100082300
transcript_129332.nic	chr7	+	2150	5	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	-8	0	intron_retention	FALSE	canonical	3	34	junction_1	47.9915357120399	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	9767	False	NA	9	True	AATAAA	-18	NA	100049765	100065040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787
transcript_129339.known	chr7	-	735	5	FSM	ENSG00000166526.18	ENST00000449785.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	75.2927619363243	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	-16	True	NA	NA	False	AATATA	-32	NA	100081739	100071929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100081634
transcript_129342.known	chr7	+	2009	4	FSM	ENSG00000166529.16	ENST00000292450.9	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	37.7977071615021	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	-3	True	NA	9	True	AATAAA	-18	NA	100049773	100065040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787
transcript_129345.nnic	chr7	+	2987	4	NNC	ENSG00000166529.16	novel	2009	4	NA	NA	-3	0	intron_retention	FALSE	canonical	2	6	junction_1	63.8035178410163	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	-9	True	NA	9	True	AATAAA	-18	NA	100049790	100065040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100050837_100056910_100057406_100057697_100057891_100063787
transcript_129348.known	chr7	-	2545	4	FSM	ENSG00000166526.18	ENST00000412947.6	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	89.25743044077	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	-19	True	NA	-21	True	ATTAAA	-2	NA	100081742	100069991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100081634
transcript_12935.known	chr1	-	1084	13	NNC	ENSG00000118194.21	novel	1108	15	NA	NA	2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	22.0949654899029	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTGGCATTTCTGTCA	8709	False	NA	-19	True	AATAAA	-13	NA	201377664	201359018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201373208_201373269_201377622
transcript_129356.known	chr7	+	1107	10	FSM	ENSG00000168090.10	ENST00000418625.5	1107	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	776.145604896401	4464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCTGGTGGCTCTGTC	3	True	NA	16	True	AATAAA	-21	NA	100088980	100091905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100089067_100089292_100089416_100089614_100089747_100090398_100090488_100090591_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
transcript_129357.known	chr7	+	1171	2	FSM	ENSG00000168090.10	ENST00000465027.1	1171	2	0	0	0	0	multi-exon	FALSE	canonical	3	2275	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTACTATATGTTCTG	-9	True	NA	NA	False	NA	NA	NA	100088968	100090362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100089067_100089289
transcript_129358.known	chr7	+	610	5	FSM	ENSG00000168090.10	ENST00000496358.1	610	5	0	0	0	0	multi-exon	FALSE	canonical	3	2275	junction_1	150.939557439394	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGTGAAAGGAGGTAAT	15	True	NA	NA	False	NA	NA	NA	100088992	100090780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100089067_100089289_100089416_100089614_100089747_100090398_100090488_100090591
transcript_129366.known	chr7	+	3591	15	FSM	ENSG00000221838.10	ENST00000359593.9	3591	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	15.8539250274344	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTGTGGTGGTTCA	-2	True	NA	NA	False	AAAAAG	-3	NA	100101642	100109039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_129371.known	chr7	+	1836	15	FSM	ENSG00000221838.10	ENST00000429084.5	1836	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	32.5865409803069	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGTACGTGCACGT	-12	True	NA	43	True	NA	NA	NA	100101556	100107177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100101773_100101879_100101990_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_129376.known	chr7	-	2424	15	FSM	ENSG00000106290.16	ENST00000453269.7	2424	15	0	0	0	0	multi-exon	FALSE	canonical	3	862	junction_14	73.3872868932421	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-10	True	NA	-2	True	AATAAA	-22	NA	100119358	100107069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119203
transcript_129377.known	chr7	-	2297	15	FSM	ENSG00000106290.16	ENST00000452041.5	2297	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_14	253.905705219196	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	-16	True	NA	-10	True	AATAAA	-14	NA	100119364	100107077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119328
transcript_129378.known	chr7	-	2318	15	FSM	ENSG00000106290.16	ENST00000437822.6	2318	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	269.714399213051	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGGAAGTTGTAGAT	9	True	NA	-42	True	NA	NA	NA	100119841	100107167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119694
transcript_12938.known	chr1	-	559	6	FSM	ENSG00000118194.21	ENST00000472177.2	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.777300099044	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATGTGGTGTCCGTAGG	0	True	NA	NA	False	NA	NA	NA	201377680	201367452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_129388.known	chr7	+	1681	14	FSM	ENSG00000221838.10	ENST00000445208.5	1681	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	34.001914321326	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCAATCTACAACTTCC	-12	True	NA	6	True	AAAAAG	-14	NA	100101556	100107140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_129390.known	chr7	-	2900	14	FSM	ENSG00000166508.18	ENST00000485286.5	2900	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	382.444071016432	2626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTAGCCTGGGCCTGA	-19	True	NA	-9	True	AATAAA	-18	NA	100100757	100092780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100100212
transcript_129408.known	chr7	+	1478	6	FSM	ENSG00000166997.8	ENST00000262932.5	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	8.64869932417586	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGGCCCAAAGTTTC	-19	True	NA	33	True	ATTAAA	-23	NA	100119633	100125508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100119863_100122258_100122386_100122480_100122578_100122783_100122907_100124513_100124632_100124724
transcript_129429.known	chr7	-	2467	15	FSM	ENSG00000166508.18	ENST00000303887.10	2467	15	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_11	148.78555997523	4275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-23	True	NA	-4	True	ATTAAA	-23	NA	100101397	100092727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
transcript_12943.known	chr1	-	2627	10	FSM	ENSG00000159166.15	ENST00000391967.7	2627	10	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_6	23.5613200493762	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGATTGACTGCCCTA	-7	True	NA	-7	True	TTTAAA	-15	NA	201399324	201380832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201381894_201382251_201382327_201382652_201382740_201383073_201383212_201383316_201383390_201384791_201384836_201385700_201385806_201386334_201387179_201389159_201389304_201399268
transcript_129430.known	chr7	+	1814	14	FSM	ENSG00000221838.10	ENST00000422582.5	1814	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	28.2669020495577	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTTCCTTCCGCTT	117	False	NA	14	True	AAAAAG	-22	NA	100102060	100107148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100102394_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_129431.known	chr7	-	2685	15	FSM	ENSG00000106290.16	ENST00000421980.5	2685	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	341.271990395596	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-11	True	NA	-2	True	AATAAA	-22	NA	100119359	100107069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113679_100113770_100113867_100113955_100114053_100114269_100118879
transcript_129432.known	chr7	-	2727	15	FSM	ENSG00000106290.16	ENST00000344095.8	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_14	231.919991921915	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGATCCACTGCAGT	2	True	NA	-11	True	AATAAA	-13	NA	100119346	100107078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118879
transcript_129433.known	chr7	-	1327	5	FSM	ENSG00000166508.18	ENST00000463722.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	51.9729496950096	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCCCAAACAAAACAGA	-35	True	NA	NA	False	NA	NA	NA	100101409	100098058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100098291_100098577_100098716_100099022_100099754_100100013_100100094_100101263
transcript_129434.known	chr7	-	934	8	ISM	ENSG00000106290.16	ENST00000687447.1	2572	15	0	5078	0	1447	5prime_fragment	FALSE	canonical	3	35	junction_7	339.706896471361	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACGGTTCAGTACCTTT	-1	True	NA	NA	False	NA	NA	NA	100119349	100111953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114232_100119203
transcript_12944.known	chr1	-	6142	8	FSM	ENSG00000159173.19	ENST00000622580.4	6142	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	0.989743318610787	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTGCATGCATTTTG	8501	False	NA	NA	False	AATACA	-32	NA	201421746	201403767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201409251_201410325_201410436_201411356_201411534_201413031_201413122_201414517_201414650_201415212_201415259_201417782_201417813_201421672
transcript_129465.known	chr7	+	519	3	FSM	ENSG00000188186.11	ENST00000474141.5	519	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	951.5	3889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	-10	True	NA	26	True	AATAAA	-21	NA	100148911	100154203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100148976_100153399_100153518_100153866
transcript_129470.known	chr7	-	1103	2	FSM	ENSG00000146826.17	ENST00000470260.1	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTATTGCTTCCAACTGA	3029	False	NA	-57	True	NA	NA	NA	100155674	100154474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100155165_100155261
transcript_129471.known	chr7	+	720	4	FSM	ENSG00000188186.11	ENST00000473459.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	873.57706522601	3982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	324	False	NA	26	True	AATAAA	-21	NA	100149356	100154203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100149580_100152715_100152758_100153399_100153518_100153866
transcript_129472.known	chr7	+	564	4	FSM	ENSG00000188186.11	ENST00000474831.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	728.904657688507	4849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	12	True	NA	26	True	AATAAA	-21	NA	100148933	100154203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100148976_100149498_100149566_100153399_100153518_100153866
transcript_129473.known	chr7	+	613	4	FSM	ENSG00000188186.11	ENST00000488241.5	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	769.131111493136	3693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	18	True	NA	26	True	AATAAA	-21	NA	100148993	100154203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153849
transcript_129474.known	chr7	+	533	3	FSM	ENSG00000188186.11	ENST00000488338.2	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	920	3796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	35	False	NA	26	True	AATAAA	-21	NA	100152679	100154203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100152758_100153399_100153518_100153866
transcript_129475.known	chr7	-	2405	4	FSM	ENSG00000197093.11	ENST00000360039.9	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	7.54247233265651	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTATGGAGGGTG	-11	True	NA	-3	True	AATAAA	-15	NA	100168617	100159243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100160960_100166501_100166806_100166970_100167284_100168545
transcript_12948.nnic	chr1	-	1059	3	NNC	ENSG00000174307.7	novel	896	3	NA	NA	-7	359	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	115	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTGCTGAGTGAAATTC	0	True	NA	-3	True	AATGAA	-28	NA	201469195	201465493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_201466179_201468340_201468561_201469041
transcript_129481.nic	chr7	-	1853	3	NIC	ENSG00000213420.8	novel	2129	4	NA	NA	-24	14	intron_retention	FALSE	canonical	3	25	junction_1	56	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAATTATCAGGCATG	NA	False	NA	NA	False	NA	NA	NA	100177405	100173443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_100174766_100176206_100176366_100177033
transcript_129484.known	chr7	-	2546	10	FSM	ENSG00000213420.8	ENST00000292377.4	2546	10	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_7	16.478942792411	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATGTGTGGCTTCTGTG	-19	True	NA	-6	True	AATAAA	-16	NA	100177381	100169605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100170484_100171260_100171437_100171538_100171679_100171778_100171926_100172086_100172218_100173834_100173998_100174684_100174766_100175571_100175895_100176206_100176366_100177033
transcript_12950.known	chr1	-	2749	2	FSM	ENSG00000174307.7	ENST00000367311.5	2749	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGATCAATTGGTGAT	7	True	NA	NA	False	NA	NA	NA	201469188	201464277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201466179_201468340
transcript_129505.known	chr7	+	1011	6	FSM	ENSG00000085514.16	ENST00000350573.2	1011	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTCTTCAAAACTATTT	2	True	NA	NA	False	AATAAA	-17	NA	100373527	100400096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100373721_100374043_100374434_100397878_100397913_100399290_100399341_100399580_100399613_100399784
transcript_129518.known	chr7	+	683	4	FSM	ENSG00000242294.6	ENST00000422479.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	82.8666934835033	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	1	True	NA	4	True	AATAAA	-15	NA	100336124	100341328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100340944
transcript_12952.known	chr1	-	1820	6	FSM	ENSG00000159176.14	ENST00000340006.7	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	14.2351677194194	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTCCAATCCTGTG	-11	True	NA	-2	True	AATAAA	-17	NA	201507123	201483529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201484790_201485282_201485377_201488854_201488985_201490175_201490345_201496191_201496305_201507069
transcript_129522.known	chr7	-	551	4	FSM	ENSG00000078319.11	ENST00000688316.1	816	4	51	214	-1	-214	multi-exon	FALSE	canonical	0	0	junction_3	128.90565025113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCTCACTTTGTGC	50	False	NA	NA	False	NA	NA	NA	100335908	100330207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100330285_100330462_100330550_100332441_100332577_100335656
transcript_129525.known	chr7	+	683	2	FSM	ENSG00000085514.16	ENST00000474013.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGTTGAATATTCATGC	481	False	NA	44	True	AATAAA	-20	NA	100374043	100376413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100374434_100376120
transcript_129526.known	chr7	-	1244	7	FSM	ENSG00000078319.11	ENST00000675162.2	1822	7	0	578	0	0	multi-exon	FALSE	canonical	3	93	junction_1	72.6622705092234	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	NA	False	NA	-5	True	AATAAA	-18	NA	100336307	100320913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_129527.known	chr7	-	788	6	FSM	ENSG00000078319.11	ENST00000675610.2	837	6	45	4	-1	0	multi-exon	FALSE	canonical	3	13	junction_1	100.002799960801	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	19	False	NA	-4	True	AATAAA	-19	NA	100335939	100320912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100321085_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_129528.known	chr7	-	747	6	FSM	ENSG00000078319.11	ENST00000674972.2	779	6	29	3	0	0	multi-exon	FALSE	canonical	3	130	junction_1	63.1778442177319	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	8	True	NA	NA	False	ATTAAA	-18	NA	100335950	100325659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_129529.known	chr7	-	604	4	FSM	ENSG00000078319.11	ENST00000675836.2	757	4	63	90	0	2	multi-exon	FALSE	canonical	3	242	junction_3	24.3082062046727	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGTTAAAAAAATTGGT	4	True	NA	-15	True	AATAAA	-21	NA	100335916	100329986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335837
transcript_129530.known	chr7	-	586	5	FSM	ENSG00000078319.11	ENST00000686203.1	620	5	34	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	103.151587481725	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTGGGTCCGGTGTTC	26	False	NA	-1	True	AATAAA	-22	NA	100335932	100320909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100321085_100325690_100325780_100330462_100330550_100332441_100332582_100335837
transcript_129532.known	chr7	-	2364	18	FSM	ENSG00000078487.18	ENST00000684423.1	2364	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.14528539469362	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTGGCTGGTCTCTAA	-21	True	NA	-18	True	AATAAA	-16	NA	100428703	100400871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100401337_100401888_100402042_100402515_100402577_100403693_100403786_100404177_100404245_100405012_100405094_100406693_100406799_100407227_100407304_100408538_100408660_100409427_100409545_100415974_100416098_100416304_100416457_100417065_100417184_100419110_100419190_100419629_100419884_100420621_100420679_100425029_100425137_100428567
transcript_129533.known	chr7	-	2110	16	FSM	ENSG00000078487.18	ENST00000360951.8	2110	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.7982452088651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGTTGGCTGGTCTCTA	18	True	NA	-19	True	AATAAA	-15	NA	100428664	100400872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100401337_100403693_100403786_100404177_100404245_100405012_100405094_100406693_100406799_100407227_100407304_100408538_100408660_100409427_100409545_100415974_100416098_100416304_100416457_100417065_100417184_100419110_100419190_100419629_100419884_100420621_100420679_100425029_100425137_100428567
transcript_129544.nnic	chr7	+	1874	5	NIC	ENSG00000146834.14	novel	2261	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	77.2410998109167	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	-2	True	NA	27	True	AATAAA	-27	NA	100428789	100434118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_100429041_100431029_100431690_100432918_100433138_100433262_100433390_100433501
transcript_129547.nic	chr7	+	1733	5	NIC	ENSG00000146834.14	novel	2822	4	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	75.5426204205282	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	48	False	NA	27	True	AATAAA	-27	NA	100429403	100434118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_100429514_100431029_100431690_100432918_100433138_100433262_100433390_100433501
transcript_129553.known	chr7	-	1300	5	FSM	ENSG00000078487.18	ENST00000464510.5	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1.29903810567666	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCATCTGCCTCCCAGG	7700	False	NA	NA	False	NA	NA	NA	100428992	100418732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100419190_100419629_100419884_100420621_100420679_100425029_100425137_100428567
transcript_129558.known	chr7	+	2261	5	FSM	ENSG00000146834.14	ENST00000414441.5	2261	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.6659513557904	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTCTCGGTACTGTC	25	False	NA	26	True	AATAAA	-26	NA	100428816	100434117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100429041_100430614_100431690_100432918_100433138_100433262_100433390_100433501
transcript_129559.known	chr7	-	965	3	FSM	ENSG00000160813.7	ENST00000487452.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	62	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	269	False	NA	-23	True	AATAAA	-18	NA	100436423	100435281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100435534_100435630_100435768_100435847
transcript_12956.known	chr1	+	494	1	FSM	ENSG00000223396.4	ENST00000482594.2	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAGAGGATTATTAT	NA	False	NA	NA	False	NA	NA	NA	201520055	201520549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201520100_201520500
transcript_129560.known	chr7	-	474	2	FSM	ENSG00000160813.7	ENST00000476185.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTCTTCTTGGAGGC	622	False	NA	-24	True	AATAAA	-17	NA	100436070	100435282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100435534_100435847
transcript_129561.known	chr7	-	758	2	FSM	ENSG00000160813.7	ENST00000470295.5	758	2	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	556	False	NA	-23	True	AATAAA	-18	NA	100436136	100435281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100435534_100435630
transcript_129563.known	chr7	-	1469	5	FSM	ENSG00000166925.9	ENST00000393991.5	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	48.0884601541784	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAACTTGAAT	21	False	100479253	-30	True	ATTAAA	-19	NA	100479232	100466537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100477460_100478793
transcript_129564.nnic	chr7	-	2464	5	NNC	ENSG00000166925.9	novel	2318	5	NA	NA	-234	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	56.7230112035671	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	NA	False	NA	-11	True	ATTAAA	-38	NA	100479466	100466518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478202_100478793
transcript_129565.known	chr7	-	2318	5	FSM	ENSG00000166925.9	ENST00000300181.7	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	22.7307610959246	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-24	True	NA	-11	True	ATTAAA	-38	NA	100479214	100466518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478308_100478793
transcript_129567.nnic	chr7	-	1550	4	NIC	ENSG00000166925.9	novel	2318	5	NA	NA	-245	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	61.8402961039339	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	NA	False	NA	-11	True	ATTAAA	-38	NA	100479477	100466518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_100467169_100467551_100467601_100474273_100474441_100478793
transcript_129570.known	chr7	-	2060	3	FSM	ENSG00000166925.9	ENST00000493217.1	2060	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	23.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAGAAAAAAAAAAT	21	True	NA	NA	False	AAAAAG	-6	NA	100479169	100473787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100474441_100477276_100478308_100478793
transcript_129571.known	chr7	-	3177	18	FSM	ENSG00000077454.17	ENST00000310300.11	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_11	22.7573327473064	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGAGAGCACGTGC	9	True	NA	-9	True	AATAAA	-39	NA	100586129	100574010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
transcript_129575.known	chr7	+	1516	9	FSM	ENSG00000106333.13	ENST00000223061.6	1516	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	64.0248975008941	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCAGATCTCCATGCTT	-4	True	NA	27	True	AATAAA	-18	NA	100602362	100608175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_12959.known	chr1	+	11416	24	FSM	ENSG00000198700.10	ENST00000361565.9	11416	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	223.754447844186	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCGTAGTGCTGCCTC	-24	True	NA	4	True	AATAAA	-17	NA	201829156	201884291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010_201853098_201854594_201854715_201854822_201854924_201855123_201855183_201855782_201855935_201857095_201857195_201858446_201858554_201858854_201858995_201863447_201863608_201866732_201866960_201868647_201868797_201869589_201869719_201870582_201870859_201871160_201871328_201872827_201872962_201874249_201874373_201874831_201874937_201875151_201875229_201875943
transcript_129605.known	chr7	-	987	5	FSM	ENSG00000205307.12	ENST00000614631.4	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	11.2805141726785	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATAAAACAGTGTTGGT	3083	False	NA	-60	True	NA	NA	NA	100573608	100572255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100572572_100572653_100572752_100572859_100573014_100573105_100573213_100573296
transcript_129623.known	chr7	-	668	2	FSM	ENSG00000205307.12	ENST00000611464.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGACCCCAGACACCCA	3625	False	NA	-121	True	NA	NA	NA	100573066	100572316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100572572_100572653
transcript_129624.known	chr7	+	318	2	FSM	ENSG00000106333.13	ENST00000490909.1	318	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGACTCCCGGAGGCTGGG	114	False	NA	NA	False	NA	NA	NA	100604987	100605765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100605216_100605675
transcript_129628.known	chr7	+	1053	6	FSM	ENSG00000106330.12	ENST00000223054.8	1053	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	115.352329842097	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTACTCATTTTCCA	3983	False	NA	-27	True	AAAACA	-6	NA	100612101	100615326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612242_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_129630.known	chr7	+	1016	6	FSM	ENSG00000106330.12	ENST00000379527.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	165.218643015853	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCAGAAATGTAGGGTA	43	False	NA	20	True	AATAAA	-17	NA	100612429	100615373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612486_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_129632.nnic	chr7	+	1033	6	NNC	ENSG00000106330.12	novel	1154	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	151.331424363878	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCAGAAATGTAGGGTA	-25	True	NA	20	True	AATAAA	-17	NA	100612529	100615373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100612603_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_129639.known	chr7	+	1154	5	FSM	ENSG00000106330.12	ENST00000393950.7	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	22.3941956765587	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	-15	True	NA	24	True	AATAAA	-21	NA	100612539	100615377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_129640.known	chr7	+	1115	5	FSM	ENSG00000106330.12	ENST00000424091.2	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	177.973839369723	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	1	True	NA	31	True	AATAAA	-28	NA	100612555	100615384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612997_100613193_100613270_100613506_100613707_100614866_100615032_100615151
transcript_129644.known	chr7	+	571	3	FSM	ENSG00000106330.12	ENST00000497456.1	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	27	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTCCTGGTTCAGTCT	260	False	NA	NA	False	GATAAA	-12	NA	100612814	100613789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612997_100613193_100613270_100613476
transcript_129646.known	chr7	-	2421	15	FSM	ENSG00000106327.13	ENST00000476304.5	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.40785520878506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGTGGAGTTTCAATATC	9093	False	NA	NA	False	NA	NA	NA	100633650	100620462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415
transcript_129651.known	chr7	-	610	3	FSM	ENSG00000106327.13	ENST00000475011.1	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTCTACTAAAAAAAAAAA	9185	False	NA	NA	False	NA	NA	NA	100633558	100632768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100633124_100633228_100633341_100633415
transcript_129654.known	chr7	-	947	7	FSM	ENSG00000077080.10	ENST00000487125.1	947	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.326991442115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTCTGGGTTGAAAGA	8674	False	NA	NA	False	NA	NA	NA	100647738	100643141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647112_100647222_100647285_100647443
transcript_129655.nic	chr7	-	757	6	ISM	ENSG00000077080.10	ENST00000487125.1	947	7	394	-45	394	0	3prime_fragment	FALSE	canonical	1	7	junction_5	11.7405280971513	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCGTGGGGTGG	9068	False	NA	NA	False	AGTAAA	-20	NA	100647344	100643096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647112_100647222
transcript_129662.nnic	chr7	+	1164	2	NNC	ENSG00000172336.5	novel	850	2	NA	NA	-10545	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCATCCCACTGCCA	NA	False	NA	18	True	AATAAA	-19	NA	100695575	100707486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100696074_100706820
transcript_129663.known	chr7	+	850	2	FSM	ENSG00000172336.5	ENST00000303151.5	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	0	4932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCATCCCACTGCCA	-14	True	NA	18	True	AATAAA	-19	NA	100706120	100707486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100706305_100706820
transcript_129664.known	chr7	+	483	2	FSM	ENSG00000172336.5	ENST00000457480.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCCAAGTAATTGAAAAGA	201	False	NA	NA	False	NA	NA	NA	100706335	100707242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100706397_100706820
transcript_129665.nnic	chr7	+	1458	5	NNC	ENSG00000130427.3	novel	1662	5	NA	NA	579	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.4790199457749	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTCTTGGCTTTTCTG	275	False	NA	4	True	NA	NA	NA	100721046	100723700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100721369_100721557_100721704_100721961_100722049_100722663_100722844_100722977
transcript_129692.nnic	chr7	-	471	3	NNC	ENSG00000236305.2	novel	388	2	NA	NA	0	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGACCTGCCTCCC	-18	True	NA	NA	False	NA	NA	NA	100852637	100837312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_100837580_100851975_100852056_100852513
transcript_129696.known	chr7	-	369	2	FSM	ENSG00000236305.2	ENST00000412754.2	388	2	19	0	19	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTCTGACCTGCCTCC	3	True	NA	NA	False	NA	NA	NA	100852616	100837313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100837580_100852513
transcript_129697.nnic	chr7	-	333	2	NNC	ENSG00000236305.2	novel	276	2	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGAGTTCAGTGAGCA	-26	True	NA	-1	True	CATAAA	-19	NA	100852645	100851979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_100852132_100852464
transcript_129698.nnic	chr7	-	289	2	FSM	ENSG00000236305.2	ENST00000684935.1	276	2	-13	0	-13	0	multi-exon	FALSE	canonical	1	1	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGAGTTCAGTGAGCA	NA	False	NA	-1	True	CATAAA	-19	NA	100852650	100851979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100852132_100852513
transcript_129699.known	chr7	+	1912	12	FSM	ENSG00000146828.18	ENST00000415287.5	1912	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	30.7904138779728	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGTTTAGGAAAAATGAAAA	-5	True	NA	NA	False	AATAAA	-17	NA	100852736	100865535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100852840_100854155_100854379_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865359
transcript_129700.known	chr7	+	3315	14	FSM	ENSG00000146828.18	ENST00000354161.8	3315	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	21.3716064471106	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCTGAGCAGTGCT	-29	True	NA	14	True	AATAAA	-15	NA	100852712	100867010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100852836_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_129705.known	chr7	+	1693	9	FSM	ENSG00000087077.14	ENST00000200457.9	1693	9	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_6	60.5050359474317	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTGTCTCA	-15	True	NA	24	True	AAGAAA	-27	NA	100867386	100873454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_129712.known	chr7	+	1303	8	FSM	ENSG00000087077.14	ENST00000619988.4	1303	8	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	249.871313818509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCCTAGAAGTACCTGC	96	False	NA	NA	False	NA	NA	NA	100867497	100873303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100867607_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_129713.known	chr7	+	2955	20	FSM	ENSG00000087087.20	ENST00000618262.4	2955	20	0	0	0	0	multi-exon	TRUE	canonical	3	322	junction_17	177.158817272514	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	-23	True	NA	15	True	AATAAA	-16	NA	100875125	100888664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_129714.known	chr7	+	2893	20	FSM	ENSG00000087087.20	ENST00000618411.4	2893	20	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_17	180.583342228193	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	36	True	NA	15	True	AATAAA	-16	NA	100875184	100888664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_129721.nic	chr7	+	1295	8	ISM	ENSG00000087087.20	ENST00000611405.5	2990	20	-50	3866	-50	246	5prime_fragment	FALSE	canonical	3	638	junction_5	50.4801436008178	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAGAAGAAAGAAGACT	7651	False	NA	28	True	AAAACA	-27	NA	100875052	100884798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739
transcript_129723.nic	chr7	-	652	2	ISM	ENSG00000087085.16	ENST00000412389.5	2218	4	2910	-3	2755	0	3prime_fragment	FALSE	canonical	3	32	junction_1	0	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	5507	False	NA	-4	True	AATAAA	-13	NA	100891478	100889993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100890336_100891168
transcript_129725.nic	chr7	-	683	2	ISM	ENSG00000087085.16	ENST00000411582.4	2928	5	4410	722	2755	-505	3prime_fragment	FALSE	canonical	3	17	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGCCTGACATTGGGGG	5507	False	NA	-4	True	TATAAA	-15	NA	100891478	100890715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100891089_100891168
transcript_129735.nnic	chr7	+	927	3	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTAAGAGGCATTTAA	NA	False	NA	6	True	AATAAA	-21	NA	100922544	100943427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_100922817_100924559_100924691_100942903
transcript_129738.nnic	chr7	+	1913	3	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGCCTTTAGGACTGTTT	NA	False	NA	NA	False	AATACA	-20	NA	100922434	100944303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_100922817_100924559_100924691_100942903
transcript_12974.nic	chr1	+	945	5	NIC	ENSG00000198700.10	novel	704	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_4	474.116217292765	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGACTTTATCCTTGAG	23	False	NA	NA	False	AATAAA	-22	NA	201829147	201850816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201850447
transcript_12975.known	chr1	+	914	5	FSM	ENSG00000198892.7	ENST00000464117.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	48.2623041306567	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAAGATCCCAGCCAG	2	True	NA	NA	False	NA	NA	NA	201888679	201892137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201888782_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_129750.nic	chr7	+	1445	3	ISM	ENSG00000169894.18	ENST00000614399.1	1093	4	341	-601	341	0	3prime_fragment	FALSE	canonical	3	250	junction_2	27.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCTCTGTCTGTCTCC	91	False	NA	33	True	AATACA	-20	NA	100966578	100968347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_100966744_100966898_100966952_100967120
transcript_129751.known	chr7	+	1093	4	FSM	ENSG00000169894.18	ENST00000614399.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	43.6882898116494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATCCTGCACCCCAGT	27	False	NA	NA	False	NA	NA	NA	100966237	100967746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100966560_100966651_100966744_100966898_100966952_100967120
transcript_129759.known	chr7	+	566	3	FSM	ENSG00000205277.10	ENST00000467414.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	-13	True	NA	13	True	AATAAA	-19	NA	101017262	101018936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101017398_101017574_101017664_101018594
transcript_129760.nnic	chr7	+	725	3	NNC	ENSG00000205277.10	novel	566	3	NA	NA	-122	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	42	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	NA	False	NA	13	True	AATAAA	-19	NA	101017140	101018936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_101017435_101017574_101017664_101018594
transcript_129761.nnic	chr7	-	749	3	NNC	ENSG00000227053.2	novel	442	3	NA	NA	-1467	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	24.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	101019132	101014319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101014440_101015197_101015268_101018573
transcript_129762.known	chr7	+	675	2	FSM	ENSG00000205277.10	ENST00000474482.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	58	False	NA	16	True	AATAAA	-22	NA	101017333	101018939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101017664_101018594
transcript_129764.known	chr7	-	372	3	FSM	ENSG00000227053.2	ENST00000448513.2	442	3	64	6	7	-5	multi-exon	FALSE	canonical	3	48	junction_2	5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCCAGTGGTGGTATT	-3	True	NA	-6	True	AATAAA	-16	NA	101017601	101014324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101014440_101015197_101015268_101017414
transcript_129765.known	chr7	-	407	3	FSM	ENSG00000227053.2	ENST00000441882.1	407	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	-10	True	NA	-1	True	AATAAA	-21	NA	101017608	101014319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101014440_101015197_101015291_101017414
transcript_129766.known	chr7	+	502	3	FSM	ENSG00000205277.10	ENST00000473098.5	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	18	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	NA	False	NA	16	True	AATAAA	-22	NA	101016877	101018939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101016946_101017574_101017664_101018594
transcript_129767.known	chr7	+	10910	3	FSM	ENSG00000169871.13	ENST00000306085.11	10910	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTCTCAGAAGGGTTTA	-7	True	NA	13	True	AATAAA	-21	NA	101085480	101097967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101085572_101087005_101087169_101087311
transcript_129768.known	chr7	+	735	2	FSM	ENSG00000169871.13	ENST00000487252.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAGAAACAACAGAAA	4123	False	NA	NA	False	NA	NA	NA	101089610	101090624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101089892_101090170
transcript_129769.known	chr7	+	3156	9	FSM	ENSG00000106366.9	ENST00000223095.5	3156	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_7	1.6583123951777	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTCAGGACAGTCAC	24	True	NA	5	True	AATAAA	-16	NA	101127103	101139247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101127245_101128392_101128665_101130420_101130655_101131874_101132070_101133694_101133894_101135493_101135595_101135714_101135802_101137000_101137085_101137404
transcript_12977.known	chr1	+	1432	5	FSM	ENSG00000198892.7	ENST00000362011.7	1432	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	7.82623792124926	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCACTGCTAACTGTAC	2	True	NA	NA	False	NA	NA	NA	201888897	201892587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201889068_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_129775.known	chr7	+	1226	5	FSM	ENSG00000106367.15	ENST00000337619.11	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	28.577744837548	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGGCCTTGGGCTCT	4	True	NA	39	True	AATAAA	-19	NA	101154475	101161276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101154518_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_129778.known	chr7	+	573	5	FSM	ENSG00000106367.15	ENST00000429457.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	79.6413837147497	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGGAGGAGATGGGT	53	False	NA	NA	False	NA	NA	NA	101154524	101160537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101154653_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_129780.known	chr7	+	779	5	FSM	ENSG00000106367.15	ENST00000646560.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	83.9583229942095	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCTGCCTTTGCAGAA	-8	True	NA	NA	False	NA	NA	NA	101154984	101160827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101155029_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_129782.known	chr7	-	2147	7	FSM	ENSG00000106384.12	ENST00000223114.9	2147	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTTGGGCATTGGGAT	-10	True	NA	NA	False	AATAAA	-18	NA	101201036	101195006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101196101_101196186_101196390_101198190_101198366_101198625_101198831_101200233_101200305_101200407_101200516_101200745
transcript_129786.nnic	chr7	-	1056	2	NNC	ENSG00000205267.5	novel	744	5	NA	NA	960	426	intron_retention	FALSE	canonical	2	6	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGCCTGTGTGTGTTT	10007	False	NA	NA	False	ATTAAA	-13	NA	101202566	101201382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101202016_101202143
transcript_129787.nnic	chr7	-	847	2	NNC	ENSG00000205267.5	novel	744	5	NA	NA	960	217	intron_retention	FALSE	canonical	2	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTAGCCAGAC	10007	False	NA	NA	False	ATTAAA	-16	NA	101202566	101201591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101202016_101202143
transcript_129789.known	chr7	-	2821	19	FSM	ENSG00000106397.12	ENST00000223127.8	2821	19	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_15	16.478287247687	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGAGTCCATTGGTCTG	12	True	NA	-11	True	AATAAA	-14	NA	101217581	101205983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165
transcript_129814.known	chr7	+	728	5	FSM	ENSG00000106400.12	ENST00000305105.3	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_1	167.633528865797	13113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	-4	True	NA	34	True	AATAAA	-17	NA	101218164	101224190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101218218_101222603_101222775_101223476_101223557_101223672_101223843_101223936
transcript_129815.nic	chr7	-	1954	3	ISM	ENSG00000106404.14	ENST00000433833.1	832	6	3230	-311	3230	0	intron_retention	FALSE	canonical	3	10	junction_2	13	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCTTGAAGGTGTCAGA	7269	False	NA	-3	True	AATAAA	-18	NA	101234247	101232093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_101232516_101232603_101232721_101232832
transcript_12982.known	chr1	-	3927	3	FSM	ENSG00000163431.13	ENST00000367288.5	3927	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGTTTTGTTTGTTGGT	-20	True	NA	NA	False	AATAAA	-13	NA	201946548	201896455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201898399_201899236_201900752_201946079
transcript_129821.known	chr7	-	1005	5	FSM	ENSG00000214253.9	ENST00000473527.5	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	262.356984850794	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTGTCTGCGTTGAGG	8	True	NA	-1	True	AATAAA	-21	NA	101252291	101239611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101251894
transcript_129823.known	chr7	-	731	4	FSM	ENSG00000214253.9	ENST00000482199.5	731	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	292.770672483886	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCACTCCTGGTCCTCTCC	3324	False	NA	59	True	NA	NA	NA	101241785	101239551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101241589
transcript_129824.known	chr7	-	530	4	FSM	ENSG00000214253.9	ENST00000480497.1	530	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	297.484266624117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCCCGTCTCTATCCT	7568	False	NA	NA	False	NA	NA	NA	101244731	101239731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244556
transcript_129825.known	chr7	-	631	4	FSM	ENSG00000214253.9	ENST00000442303.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	291.356597087944	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCGTTGAGGGGAGG	7251	False	NA	4	True	AATAAA	-26	NA	101245048	101239606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244897
transcript_129827.known	chr7	-	915	4	FSM	ENSG00000214253.9	ENST00000474120.5	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	258.833279673744	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-17	True	NA	17	True	AATAAA	-39	NA	101252316	101239593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101251894
transcript_129828.known	chr7	-	870	5	FSM	ENSG00000214253.9	ENST00000223136.5	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_4	47.7094068292617	6003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCCTTCCTCCCTTTCC	-5	True	NA	NA	False	NA	NA	NA	101245081	101239471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
transcript_129829.known	chr7	-	745	4	FSM	ENSG00000214253.9	ENST00000449367.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	248.463724157516	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	1	True	NA	NA	False	NA	NA	NA	101245075	101239457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244959
transcript_12983.nnic	chr1	+	756	2	NNC	ENSG00000223774.5	novel	494	3	NA	NA	1214	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATGCAGTCTGAGTT	6160	False	NA	NA	False	AGTAAA	-17	NA	201895055	201899978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_201895563_201899729
transcript_129830.known	chr7	-	527	4	FSM	ENSG00000214253.9	ENST00000463406.5	527	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	297.484266624117	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTGTCTGCGTTGAGG	3932	False	NA	-1	True	AATAAA	-21	NA	101241177	101239611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101241125
transcript_129832.known	chr7	-	345	2	FSM	ENSG00000214252.4	ENST00000454506.2	345	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGAACAACAGACCGCG	NA	False	NA	NA	False	NA	NA	NA	101289771	101287481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101287744_101289688
transcript_129844.nnic	chr7	+	1099	3	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	826	2	NA	NA	-7	-16	multi-exon	FALSE	canonical	3	27	junction_1	114	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	NA	False	NA	15	True	ATTAAA	-16	NA	101299550	101304562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_101299867_101302798_101303029_101304009
transcript_129851.known	chr7	+	867	2	FSM	ENSG00000232301.3	ENST00000429254.3	887	2	20	0	20	0	multi-exon	FALSE	canonical	3	296	junction_1	0	1557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCGATTTTGCAAGAT	NA	False	NA	12	True	AATAAA	-17	NA	101299577	101301346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101299867_101300768
transcript_129856.known	chr7	-	4881	5	FSM	ENSG00000128581.17	ENST00000315322.10	4881	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	17.0055138117024	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAGTTTTGAGAGTT	-34	True	NA	-8	True	ATTAAA	-26	NA	101321812	101310913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319033_101321670
transcript_129857.known	chr7	-	933	5	FSM	ENSG00000128581.17	ENST00000430911.5	933	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	105.49259452682	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATTTACCACCTCACATA	-19	True	NA	-100	True	NA	NA	NA	101321797	101314877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319064_101321670
transcript_12986.known	chr1	+	1650	6	FSM	ENSG00000134375.11	ENST00000367287.5	1650	6	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	50.4396669299075	4569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAGTGTATAATTCAG	-8	True	NA	NA	False	CATAAA	-18	NA	201955502	201970664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201955553_201957280_201957381_201957510_201957575_201963615_201963745_201965432_201965544_201969468
transcript_129864.known	chr7	-	1727	4	FSM	ENSG00000128581.17	ENST00000440362.5	1727	4	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	19.6015872373189	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTTGAATGTGATTT	-12	True	NA	-10	True	NA	NA	NA	101321790	101314787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101319033_101321670
transcript_129865.known	chr7	-	875	4	FSM	ENSG00000128581.17	ENST00000437644.2	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	114.126635317479	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTGTATTGGCTTGAAT	1	True	NA	-17	True	NA	NA	NA	101321777	101314794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318955_101319033_101321670
transcript_129882.known	chr7	+	1194	3	FSM	ENSG00000232445.2	ENST00000419422.2	1194	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	1	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGAGGTGGTCAA	-13	True	NA	10	True	ATTAAA	-17	NA	101308295	101311343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101308549_101309613_101309695_101310483
transcript_129885.known	chr7	-	567	3	FSM	ENSG00000128581.17	ENST00000495166.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	126.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCACATCCAGCTCCTG	-45	True	NA	NA	False	NA	NA	NA	101321823	101315071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101321670
transcript_129889.known	chr7	+	4596	2	FSM	ENSG00000232445.2	ENST00000663483.1	4596	2	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	0	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTATCATTGGGCT	5480	False	NA	NA	False	ATTAAA	-2	NA	101308269	101314800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101308549_101310483
transcript_129891.known	chr7	-	1170	2	FSM	ENSG00000128581.17	ENST00000468833.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAGAAGACCTGGAAAG	-12	True	NA	NA	False	AATAGA	-23	NA	101321790	101315492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101316543_101321670
transcript_129893.known	chr7	-	917	4	FSM	ENSG00000128581.17	ENST00000498704.6	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	102.704538469447	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAAATACCGACTGGC	14	True	NA	25	True	NA	NA	NA	101321764	101314752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101321670
transcript_129894.known	chr7	-	923	3	FSM	ENSG00000128581.17	ENST00000485695.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	98.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTACTCAGGAGGCTGAG	-7	True	NA	NA	False	AATACA	-38	NA	101321785	101315824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101316543_101318123_101318214_101321670
transcript_129895.known	chr7	+	2978	13	FSM	ENSG00000160963.14	ENST00000313669.12	2978	13	0	0	0	0	multi-exon	TRUE	canonical	3	197	junction_2	62.0821028960843	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	5	True	NA	15	True	AATAAA	-15	NA	101362874	101559024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101363191_101419976_101420100_101447683_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_129896.known	chr7	+	2970	13	FSM	ENSG00000160963.14	ENST00000613501.1	2970	13	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	60.178149873706	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	7	True	NA	15	True	AATAAA	-15	NA	101362876	101559024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101363191_101419976_101420100_101447689_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_129897.nnic	chr7	-	1096	7	NNC	ENSG00000106436.7	novel	1004	8	NA	NA	2449	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.45205252953466	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTGTGCGGTAAAT	2439	False	NA	NA	False	AATAAA	-15	NA	101625075	101613329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101613574_101613661_101613711_101616219_101616299_101622095_101622201_101622996_101623073_101624171_101624265_101624625
transcript_129899.nnic	chr7	-	703	6	NNC	ENSG00000106436.7	novel	1004	8	NA	NA	2766	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	2.65329983228432	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTGTGCGGTAAAT	2756	False	NA	NA	False	AATAAA	-15	NA	101624758	101613329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101613574_101613661_101613711_101616219_101616299_101622095_101622201_101624171_101624265_101624625
transcript_129902.known	chr7	+	2929	23	FSM	ENSG00000257923.12	ENST00000622516.6	2929	23	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_17	40.0033056485326	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	0	True	NA	16	True	AATAAA	-16	NA	101816006	102283958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_129905.nic	chr7	+	2941	8	ISM	ENSG00000257923.12	ENST00000645010.1	13651	22	-22	140825	-22	1738	5prime_fragment	FALSE	canonical	3	199	junction_6	17.9580008886949	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGTCAATAT	NA	False	NA	NA	False	NA	NA	NA	101815931	102117408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206
transcript_129906.known	chr7	+	947	7	FSM	ENSG00000257923.12	ENST00000497815.5	947	7	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	19.394300422776	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACACGCCATCCTTGCT	3	True	NA	NA	False	NA	NA	NA	101815959	102112010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697
transcript_129909.known	chr7	+	559	2	FSM	ENSG00000257923.12	ENST00000607092.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTGGGGTGGAAGGTC	1	True	NA	NA	False	NA	NA	NA	101816007	101916587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101816094_101916114
transcript_129911.known	chr7	+	1566	8	FSM	ENSG00000257923.12	ENST00000487284.2	1566	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	14.4264496318253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAATAAACCACGGTTG	19	False	NA	-10	True	NA	NA	NA	102274173	102283932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_129921.known	chr7	+	491	5	FSM	ENSG00000239969.6	ENST00000484974.5	491	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	39.2706951810125	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTCTCATCATTATC	276	False	NA	37	True	TATAAA	-40	NA	102364161	102380633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102364207_102366017_102366077_102375822_102375950_102376211_102376323_102380484
transcript_129924.known	chr7	+	2159	6	FSM	ENSG00000128563.13	ENST00000397912.3	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	32.8998480239651	691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	-24	True	NA	10	True	AATAAA	-22	NA	102396362	102426666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_129925.known	chr7	+	10747	4	FSM	ENSG00000160991.17	ENST00000495936.7	10747	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	6.64997911442	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCCATTTTTTTTTTTT	2	True	NA	NA	False	AATAAA	-19	NA	102433574	102456825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102433662_102436224_102436334_102438943_102439182_102446512
transcript_129928.known	chr7	-	1405	3	FSM	ENSG00000160993.4	ENST00000490528.1	1405	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	66	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAACATTTTAAATGATT	-6	True	NA	NA	False	NA	NA	NA	102464863	102456833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102457982_102459603_102459711_102464713
transcript_129931.known	chr7	-	2092	3	FSM	ENSG00000160993.4	ENST00000292566.4	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	4.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACCTCCCACTACA	-6	True	NA	-21	True	AATAAA	-20	NA	102464863	102456237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102457982_102459603_102459802_102464713
transcript_129932.known	chr7	+	2160	15	FSM	ENSG00000161036.13	ENST00000292616.10	2160	15	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_9	21.5545108683892	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGAAAGGTGTTTCG	8	True	NA	20	True	ATTAAA	-19	NA	102464983	102473168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102465161_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262_102468378_102468553_102468655_102468854_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
transcript_129939.known	chr7	+	1062	7	FSM	ENSG00000161036.13	ENST00000463739.5	1062	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	56.6705880996091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATGGTGGCGGGCAGGC	-20	True	NA	NA	False	NA	NA	NA	102464955	102468377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102465179_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262
transcript_129940.known	chr7	-	932	4	FSM	ENSG00000005075.16	ENST00000292614.10	937	4	15	-10	15	10	multi-exon	FALSE	canonical	3	2614	junction_3	164.719964384001	5795	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCCATCGGCCCAAAGC	6	True	NA	-1	True	AATAAA	-25	NA	102478907	102473117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102473685_102474360_102474536_102476180_102476271_102478807
transcript_129941.nic	chr7	-	1184	4	ISM	ENSG00000170667.15	ENST00000541662.5	2794	20	-7	25648	-7	-25225	5prime_fragment	FALSE	canonical	3	17	junction_3	16.7597401199687	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAAAATAGAGGCC	-6	True	NA	NA	False	AATAAA	-30	NA	102517784	102508786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_102509661_102510178_102510293_102511924_102511982_102517645
transcript_129942.nic	chr7	-	1454	3	ISM	ENSG00000170667.15	ENST00000306682.6	2589	21	5365	25225	5365	-25225	internal_fragment	FALSE	canonical	3	45	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATAAAATAGAGGCC	5388	False	NA	NA	False	AATAAA	-30	NA	102512390	102508786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_102509661_102510178_102510293_102511924
transcript_129943.known	chr7	-	991	5	FSM	ENSG00000170667.15	ENST00000467351.1	991	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	32.8281510292615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTTCCAGGTGGGGGA	NA	False	NA	NA	False	NA	NA	NA	102493311	102483483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102483714_102483824_102483890_102485038_102485160_102488219_102488599_102493115
transcript_12995.known	chr1	-	5296	2	FSM	ENSG00000234678.2	ENST00000419190.2	5296	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTATTTTTTTTTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202010463	201995695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202000328_202009799
transcript_129956.known	chr7	-	1598	9	FSM	ENSG00000267645.5	ENST00000476151.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	305.631620582688	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAAATGCCCCCAAAA	96	False	NA	-31	True	NA	NA	NA	102671641	102637048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671551
transcript_129959.known	chr7	-	2787	20	FSM	ENSG00000105808.19	ENST00000449970.6	2787	20	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_19	19.4085682309547	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCTGGGGTCTTGT	-3	True	NA	NA	False	AGTAAA	-14	NA	102616756	102582324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085_102611143_102616624
transcript_12996.known	chr1	+	3104	9	FSM	ENSG00000163435.16	ENST00000367284.10	3104	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	17.1021745693347	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCTTGTGTGTGGATT	2	True	NA	NA	False	GATAAA	-19	NA	202010586	202017183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202010707_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_12997.known	chr1	+	2044	9	FSM	ENSG00000163435.16	ENST00000367283.7	2044	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	35.2683905927106	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAGCTACCTGTGTAC	2	True	NA	14	True	AATAAA	-27	NA	202010586	202016009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202010821_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_129971.known	chr7	-	575	5	FSM	ENSG00000285437.2	ENST00000508910.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	924.336620230963	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGGCAAGATTCTTCTG	-4	True	NA	NA	False	NA	NA	NA	102572555	102566626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102566737_102566996_102567084_102568009_102568185_102569834_102569925_102572442
transcript_12999.known	chr1	-	1789	7	FSM	ENSG00000143862.8	ENST00000272217.7	1789	7	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	45.5228880161764	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-21	True	NA	-7	True	AATAAA	-20	NA	202144737	202133403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202134517_202135149_202135221_202135458_202135527_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_129991.known	chr7	-	558	4	FSM	ENSG00000105808.19	ENST00000522443.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	18.8738502225228	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAAGAGGGGCTGCTATG	7	False	NA	NA	False	NA	NA	NA	102616746	102608557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102608823_102609340_102609455_102611085_102611143_102616624
transcript_129997.known	chr7	-	348	4	FSM	ENSG00000228049.7	ENST00000333432.8	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	416.443140043018	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	136	False	NA	NA	False	NA	NA	NA	102671601	102666130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102666164_102667089_102667265_102668914_102669005_102671551
transcript_13.known	ERCC-00035	+	1114	1	FSM	ERCC-00035A	DQ459413	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00035_+_0_1100
transcript_130001.known	chr7	-	932	3	FSM	ENSG00000285437.2	ENST00000443430.2	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	1095.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCATGTGCTGTAG	NA	False	NA	NA	False	AATACA	-14	NA	102572583	102567483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102568185_102569834_102569925_102572442
transcript_130009.known	chr7	-	2065	3	FSM	ENSG00000228049.7	ENST00000358438.6	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	377	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAAAAGTCC	2	True	NA	NA	False	NA	NA	NA	102671629	102665367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102667265_102668914_102669005_102671551
transcript_130011.nnic	chr7	-	2101	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-80	1057	combination_of_known_splicesites	FALSE	canonical	3	168	junction_1	163	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGAAAGTATCATGCT	28	False	NA	NA	False	NA	NA	NA	102671709	102664310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_130016.known	chr7	-	1598	9	FSM	ENSG00000168255.20	ENST00000379340.9	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	639.302158607336	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	41	False	NA	-21	True	AATAAA	-16	NA	102572539	102537918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572471
transcript_130017.known	chr7	-	2096	3	ISM	ENSG00000168255.20	ENST00000489144.5	2553	8	-13	28370	3	-22720	5prime_fragment	FALSE	canonical	3	659	junction_2	796	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAAAGGTCC	0	True	NA	NA	False	NA	NA	NA	102572580	102566287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_102568185_102569834_102569925_102572471
transcript_130018.known	chr7	-	546	3	FSM	ENSG00000285437.2	ENST00000513438.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	326.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGTCAAGATTAGCT	NA	False	NA	NA	False	NA	NA	NA	102572583	102569199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102569544_102569834_102569925_102572471
transcript_130019.known	chr7	-	1342	6	FSM	ENSG00000267368.1	ENST00000340457.8	1342	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	110.31699778366	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	9	False	NA	-7	True	AATAAA	-16	NA	102642791	102637024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102642629
transcript_13002.known	chr1	-	1727	6	FSM	ENSG00000143862.8	ENST00000614750.1	1727	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	213.766601694465	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-27	True	NA	-7	True	AATAAA	-20	NA	202144743	202133403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202134517_202135149_202135221_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_130020.known	chr7	-	1538	7	FSM	ENSG00000105808.19	ENST00000522223.5	1538	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.0733358677057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACAGTAAACCTGCTCT	NA	False	NA	NA	False	NA	NA	NA	102593991	102582349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102582893_102584217_102584339_102587634_102587771_102590158_102590297_102592284_102592455_102592993_102593139_102593706
transcript_130023.known	chr7	-	1336	3	FSM	ENSG00000286830.1	ENST00000664535.1	1336	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGTTTGGTTTCACCTT	21	False	NA	NA	False	AATAAA	-13	NA	102748695	102699227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102700259_102703314_102703528_102748603
transcript_130029.known	chr7	+	1958	8	FSM	ENSG00000222011.9	ENST00000420217.1	1958	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	8.99205998963212	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTACTGATTCTTAAT	-9	True	NA	14	True	AATAAA	-18	NA	102749009	102809224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_130031.known	chr7	+	1446	7	FSM	ENSG00000222011.9	ENST00000409231.7	1446	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.2864974749023	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCACATGCCTTCTCAT	9	True	NA	NA	False	NA	NA	NA	102749027	102808840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102749418_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_130035.nic	chr7	+	1393	7	ISM	ENSG00000222011.9	ENST00000420217.1	1958	8	-47	21432	-8	422	5prime_fragment	FALSE	canonical	3	28	junction_1	5.59761854124889	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACTTCGTGTGACTGGAG	NA	False	NA	NA	False	AATAAA	-34	NA	102748962	102787792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334
transcript_130040.nnic	chr7	+	1773	6	NIC	ENSG00000222011.9	novel	1958	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	14.1647449677006	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTACTGATTCTTAAT	NA	False	NA	14	True	AATAAA	-18	NA	102748962	102809224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_102749418_102751691_102751802_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_130043.known	chr7	+	794	1	FSM	ENSG00000213385.3	ENST00000434317.1	794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTACACTGTTGTGTTTTC	15	False	NA	NA	False	ACTAAA	-10	NA	102755145	102755939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102755100_102755900
transcript_130050.known	chr7	-	672	7	FSM	ENSG00000161040.17	ENST00000440067.2	672	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.80871659105879	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGGTTAATACTCAAA	376	False	NA	NA	False	ATTAAA	-27	NA	103074811	103025196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103025231_103027448_103027559_103028599_103028749_103029350_103029419_103055087_103055179_103055643_103055748_103074695
transcript_130051.known	chr7	+	2116	4	FSM	ENSG00000128606.13	ENST00000339431.9	2116	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	4.49691252107735	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCCTGATACATCCAA	3	True	NA	21	True	AATAAA	-32	NA	102912999	102945111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102913146_102933773_102934686_102939429_102939586_102944209
transcript_130055.known	chr7	+	2524	6	FSM	ENSG00000170632.14	ENST00000441711.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	70.7265155369611	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	-20	True	NA	14	True	AATAAA	-14	NA	103074880	103099758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103092476_103092654_103097276_103097349_103098298
transcript_130056.known	chr7	+	2347	5	FSM	ENSG00000170632.14	ENST00000454559.5	2347	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	174.861909803136	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	-20	True	NA	14	True	AATAAA	-14	NA	103074880	103099758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103097276_103097349_103098298
transcript_130058.known	chr7	+	2266	4	FSM	ENSG00000170632.14	ENST00000541300.5	2266	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	242.194137005833	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAATCACTTACAAGGT	-20	True	NA	5	True	AATAAA	-5	NA	103074880	103099749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103098298
transcript_130059.known	chr7	+	688	3	FSM	ENSG00000170632.14	ENST00000431642.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	276	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGTGGTTCTCAGATT	NA	False	NA	31	True	AGTAAA	-31	NA	103086638	103098683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103086765_103092476_103092654_103098298
transcript_130066.known	chr7	-	5140	5	FSM	ENSG00000161048.12	ENST00000465647.6	5140	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	5.78791845139511	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAACCTTGTAAGTGAT	1	True	NA	-3	True	AATAAA	-22	NA	103149099	103099775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103148810
transcript_130067.known	chr7	-	1822	5	FSM	ENSG00000161048.12	ENST00000427257.5	1822	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	3.34477204006491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTTTCCATTCTT	19	False	NA	NA	False	NA	NA	NA	103149560	103103086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103149278
transcript_130070.known	chr7	-	2169	2	FSM	ENSG00000161048.12	ENST00000479761.1	2169	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATACAAAAAATTAG	-2	True	NA	NA	False	NA	NA	NA	103148976	103126789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103128793_103148810
transcript_130071.nic	chr7	-	2095	2	ISM	ENSG00000161048.12	ENST00000427257.5	1822	5	187	23706	-138	-3	5prime_fragment	FALSE	canonical	3	14	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAATACAAAAAAT	206	False	NA	NA	False	NA	NA	NA	103149373	103126792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_103128793_103149278
transcript_130072.known	chr7	-	591	1	FSM	ENSG00000224415.1	ENST00000432746.1	591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCCCTTTGTGTGTA	7640	False	NA	NA	False	AAGAAA	-4	NA	103141939	103141348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103141300_103141900
transcript_13008.known	chr1	-	824	7	FSM	ENSG00000077152.11	ENST00000643045.1	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	518.119677294735	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAGTTTATTTAT	7330	False	NA	-11	True	AATATA	-14	NA	202341959	202331737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335641_202335819_202341894
transcript_130081.known	chr7	+	3859	13	FSM	ENSG00000161057.13	ENST00000679205.1	3859	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	274.522413575933	4204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	NA	False	NA	NA	False	CATAAA	-19	NA	103344265	103370346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103344343_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_130084.known	chr7	+	3988	13	FSM	ENSG00000161057.13	ENST00000679341.1	3988	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	275.311780330753	4198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	NA	False	NA	NA	False	CATAAA	-19	NA	103344319	103370346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103344526_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_130088.known	chr7	+	2479	9	FSM	ENSG00000161057.13	ENST00000679250.1	2479	9	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	317.538186679964	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACACATTTAGAACACA	-26	True	NA	-6	True	ATTAAA	-4	NA	103347635	103369375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103347782_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_13009.known	chr1	-	1065	6	FSM	ENSG00000077152.11	ENST00000487227.6	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_5	143.657091714959	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	7309	False	NA	-2	True	AATAAA	-18	NA	202341980	202331656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202331961_202333009_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
transcript_130091.known	chr7	-	854	8	FSM	ENSG00000105821.15	ENST00000454277.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	137.738587067484	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-9	True	NA	NA	False	AAAAAG	-7	NA	103344778	103322726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341866_103344558
transcript_130096.known	chr7	+	1509	13	FSM	ENSG00000105819.14	ENST00000453466.1	1509	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	187.714913869114	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAGCTAGAGAAAAATA	13	True	NA	47	True	ATTAAA	-41	NA	103297456	103312312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299534_103300186_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055_103312132_103312206
transcript_130097.known	chr7	+	1714	12	FSM	ENSG00000105819.14	ENST00000428154.5	1714	12	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_8	46.0509958076482	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTATTAATGGT	-9	True	NA	34	True	ATTAAA	-45	NA	103297434	103312415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055
transcript_130098.known	chr7	-	2291	17	FSM	ENSG00000105821.15	ENST00000379263.8	2291	17	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_11	59.9864568048489	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTAGGAGCATTTTA	2	True	NA	NA	False	TATAAA	-18	NA	103344767	103312288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103319608_103319679_103319755_103319845_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_130099.known	chr7	-	1952	16	FSM	ENSG00000105821.15	ENST00000475065.5	1952	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	146.787314014378	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCATTCTTAAAATTA	2915	False	NA	-8	True	AATAAA	-18	NA	103341937	103312518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103319608_103319679_103319755_103319845_103321931_103322082_103322510_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327331_103327379_103327655_103327755_103337735_103337812_103341763
transcript_13010.known	chr1	-	1499	6	FSM	ENSG00000077152.11	ENST00000646595.1	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_5	164.213763125994	2494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-5	True	NA	-2	True	AATAAA	-18	NA	202341970	202331656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335819_202341894
transcript_130100.known	chr7	-	942	8	FSM	ENSG00000105821.15	ENST00000379257.7	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	170.92330300519	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATGCAAATCATTAA	-29	True	NA	27	True	AAAAAG	-14	NA	103344798	103323597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103323664_103324481_103324563_103326542_103326685_103327331_103327379_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_130103.known	chr7	-	1924	14	FSM	ENSG00000164815.11	ENST00000297431.9	1924	14	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_5	26.5835736975401	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTATTTATCTTT	-4	True	NA	-1	True	AATAAA	-24	NA	104208013	104126340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104126894_104136780_104136894_104161071_104161183_104165234_104165283_104166771_104166885_104168472_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_130104.known	chr7	-	1409	9	FSM	ENSG00000164815.11	ENST00000447452.6	1409	9	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	26.7756885999221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGCAAATATTGAAAAAAA	52	False	NA	NA	False	ATTAAA	-25	NA	104207957	104167993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_130109.nnic	chr7	-	1185	2	FSM	ENSG00000228393.5	ENST00000687790.1	1169	2	-20	4	-20	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTCAGTGCAATTTTT	6795	False	NA	-4	True	AATAAA	-16	NA	104983946	104981746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104982692_104983706
transcript_13011.known	chr1	+	1808	10	FSM	ENSG00000077157.22	ENST00000480184.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	3.05505046330389	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCCTTTTGGTTTGTT	13	True	NA	NA	False	AATAAA	-16	NA	202348719	202438242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820
transcript_130110.nnic	chr7	-	1453	2	NNC	ENSG00000228393.5	novel	1061	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTCAGTGCAATTTTT	-7	True	NA	-4	True	AATAAA	-16	NA	105013053	104981746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_104982692_105012545
transcript_130111.known	chr7	-	686	2	FSM	ENSG00000228393.5	ENST00000445184.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTTTTTAAAACATGT	22	True	NA	NA	False	NA	NA	NA	105013024	104982098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104982692_105012931
transcript_13012.known	chr1	-	254	1	FSM	ENSG00000236439.4	ENST00000422457.2	254	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCTGAGTCAAGAT	34	False	NA	NA	False	NA	NA	NA	202472117	202471863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202471900_202472100
transcript_130120.known	chr7	+	2523	15	FSM	ENSG00000005483.22	ENST00000476671.5	2523	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	27.3436184399167	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCAGAATGTCTTTT	18	True	NA	NA	False	AATAAA	-16	NA	105014217	105091609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
transcript_130122.known	chr7	+	6840	26	FSM	ENSG00000005483.22	ENST00000334884.9	6840	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	31.499942857091	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTACAACAACTGTTTGAA	-10	True	NA	NA	False	AATACA	-1	NA	105014189	105114361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885_105102195_105105438_105105694_105105858_105105956_105107165_105107223_105107361_105107926_105108941_105109229_105110279_105110369_105110476_105110603_105110770_105110869_105111824
transcript_13013.known	chr1	-	7635	9	FSM	ENSG00000143858.12	ENST00000367268.5	7635	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	8.03118920210451	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGGTGGGGGGTGTCT	5	True	NA	NA	False	ATTAAA	-19	NA	202710454	202590595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202596964_202599217_202599352_202600356_202600475_202601889_202602058_202602377_202602546_202602998_202603119_202604454_202604622_202605594_202605790_202710257
transcript_130133.nic	chr7	+	1968	13	NIC	ENSG00000005483.22	novel	5524	27	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_4	18.9824480332051	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	712	False	NA	-2	True	AAAAAG	-9	NA	105014163	105090132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_130144.nic	chr7	+	1485	9	ISM	ENSG00000005483.22	ENST00000257745.9	5524	27	0	35465	0	-134	5prime_fragment	FALSE	canonical	3	60	junction_4	14.3243673507768	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATACATCATTTGTCCA	712	False	NA	85	True	NA	NA	NA	105014163	105077193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962
transcript_130146.known	chr7	+	1133	7	FSM	ENSG00000005483.22	ENST00000495267.5	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	16.327379867368	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGGGAGAAAGAACAACAC	8	True	NA	NA	False	GATAAA	-14	NA	105014207	105074777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642
transcript_13015.nic	chr1	-	1237	2	ISM	ENSG00000143858.12	ENST00000367268.5	7635	9	-81	14235	-81	-14235	5prime_fragment	FALSE	canonical	3	34	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCAAGGCA	NA	False	NA	NA	False	NA	NA	NA	202710535	202604830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_202605790_202710257
transcript_130153.nic	chr7	+	672	3	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-52	50543	2	210	5prime_fragment	FALSE	canonical	3	30	junction_1	1	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	714	False	NA	NA	False	TTTAAA	-31	NA	105014165	105041066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_105014536_105038125_105038200_105040838
transcript_130158.nic	chr7	+	600	2	ISM	ENSG00000005483.22	ENST00000495267.5	1133	7	-44	33711	0	210	5prime_fragment	FALSE	canonical	3	68	junction_1	0	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	712	False	NA	NA	False	TTTAAA	-31	NA	105014163	105041066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_105014536_105040838
transcript_130159.known	chr7	+	6714	26	NNC	ENSG00000005483.22	novel	7782	27	NA	NA	0	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5078612819712	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATTGTCCTGTACAAC	-10	True	NA	17	True	AATAAA	-20	NA	105014189	105114084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_105014498_105040874_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885_105102195_105105438_105105694_105105858_105106004_105106521_105106773_105107165_105107223_105107361_105107926_105108941_105109229_105110279_105110369_105110476_105110603_105110770_105110869_105111824
transcript_130160.known	chr7	+	1500	10	FSM	ENSG00000005483.22	ENST00000478990.5	1500	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	32.9706191691188	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	6	True	NA	-2	True	AAAAAG	-9	NA	105014205	105090132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105014536_105040838_105041024_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_130161.nnic	chr7	-	663	2	FSM	ENSG00000239569.4	ENST00000687813.1	652	2	-13	2	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCGATTCCGGCTCTTG	-22	True	NA	NA	False	AATAAA	-25	NA	105014099	105013282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105013727_105013880
transcript_130162.nnic	chr7	-	709	2	FSM	ENSG00000239569.4	ENST00000684821.1	695	2	-16	2	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	0	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCGATTCCGGCTCTTG	164	False	NA	NA	False	AATAAA	-25	NA	105014109	105013282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105013763_105013880
transcript_130163.known	chr7	-	3679	16	FSM	ENSG00000135250.17	ENST00000393651.8	3679	16	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_14	32.751183184734	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTGGTCATTGCCC	-16	True	NA	-2	True	ATTAAA	-26	NA	105388921	105116373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_130176.nic	chr7	-	916	9	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	133	26924	106	17003	internal_fragment	FALSE	canonical	3	229	junction_8	35.0062494420639	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGAAAAAGAAACAGAAGAG	601	False	NA	NA	False	AAAAAG	-7	NA	105388788	105143297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647
transcript_13018.known	chr1	-	4467	26	FSM	ENSG00000117139.18	ENST00000235790.9	4467	26	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_25	222.889518820424	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAAATCAAACT	1128	False	NA	NA	False	AAGAAA	-13	NA	202807348	202729904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202730028_202730908_202731064_202731827_202731940_202733400_202733887_202735428_202735588_202736212_202736393_202740673_202740813_202741366_202741723_202742390_202742506_202742654_202742806_202745857_202745983_202746141_202746324_202748944_202749140_202750658_202750779_202752904_202753068_202755270_202755453_202756357_202756517_202758390_202758511_202760414_202760574_202762698_202762809_202764048_202764146_202766925_202767061_202773117_202773289_202774612_202774736_202777016_202777095_202806976
transcript_130187.known	chr7	+	319	1	FSM	ENSG00000213361.2	ENST00000393647.2	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTCCCTGCCCTCTC	NA	False	NA	NA	False	AAGAAA	-7	NA	105244651	105244970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105244700_105245000
transcript_130190.known	chr7	-	3525	16	FSM	ENSG00000091127.14	ENST00000469408.6	3525	16	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_4	27.8990242760487	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	0	True	NA	1	True	AATAAA	-28	NA	105522271	105456502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_130192.known	chr7	-	3480	16	FSM	ENSG00000091127.14	ENST00000356362.6	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	75.3548641797964	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGATAAGAATCTT	9822	False	105522271	-7	True	AATAAA	-20	NA	105522258	105456510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
transcript_130196.nic	chr7	-	1570	10	ISM	ENSG00000091127.14	ENST00000469408.6	3525	16	10	15538	-3	-1755	5prime_fragment	FALSE	canonical	3	349	junction_9	24.8596057893121	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGTTTCAGTATTTT	9819	False	105522271	0	True	AATAAA	-19	NA	105522261	105472040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_13020.known	chr1	+	748	2	FSM	ENSG00000228288.8	ENST00000417262.5	748	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	25	True	NA	23	True	NA	NA	NA	202810961	202811913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202811371_202811574
transcript_130201.nic	chr7	-	852	5	ISM	ENSG00000091127.14	ENST00000469408.6	3525	16	10	46037	-3	-10954	5prime_fragment	FALSE	canonical	3	349	junction_4	32.0263563334951	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATCATCCATCAGGCT	9819	False	105522271	NA	False	NA	NA	NA	105522261	105502539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_130208.nnic	chr7	-	654	3	Antisense	novelGene_ENSG00000223886.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_2	2.5	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCTGTTTTATTGTTG	-17	True	NA	-12	True	AATAAA	-13	NA	105532097	105530034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_105530458_105531496_105531652_105532021
transcript_13021.known	chr1	+	634	2	FSM	ENSG00000228288.8	ENST00000425295.2	705	2	69	2	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	25	True	NA	23	True	NA	NA	NA	202810961	202811913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202811371_202811688
transcript_130212.known	chr7	+	2860	15	FSM	ENSG00000135249.8	ENST00000257700.7	2860	15	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_8	14.4739385779816	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCATATTTGTAA	5	True	NA	9	True	AATAAA	-16	NA	105532200	105567677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105532358_105532823_105532870_105536564_105536750_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_130218.known	chr7	-	717	3	FSM	ENSG00000185055.11	ENST00000460135.1	717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACTGCAGTACATCTT	1714	False	NA	NA	False	NA	NA	NA	105581690	105567194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105567491_105569202_105569291_105581357
transcript_130219.known	chr7	-	737	5	FSM	ENSG00000185055.11	ENST00000480514.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	6.96419413859206	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGTATTTATATTTT	-17	True	NA	NA	False	AATAAA	-1	NA	105581493	105565123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105565448_105567466_105567491_105569202_105569291_105569406_105569572_105581357
transcript_130225.nic	chr7	-	2550	4	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38774	0	-14978	0	3prime_fragment	FALSE	canonical	3	64	junction_1	15.9373774505092	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGATCTGATCTGTT	3169	False	NA	-1	True	ATTAAA	-16	NA	105639244	105613473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352
transcript_130231.nic	chr7	-	1965	3	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38664	6078	-15088	681	internal_fragment	FALSE	canonical	3	82	junction_1	10.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3059	False	NA	NA	False	NA	NA	NA	105639354	105619551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105620322_105624074_105624268_105638352
transcript_130232.nic	chr7	-	1422	3	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38664	6621	-15088	138	internal_fragment	FALSE	canonical	3	82	junction_1	10.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTGAAGTCAGGATGC	3059	False	NA	NA	False	AATAAA	-31	NA	105639354	105620094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105620322_105624074_105624268_105638352
transcript_130234.known	chr7	-	1115	3	FSM	ENSG00000146776.15	ENST00000478915.1	1115	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGATAGCTGGAGCGTG	903	False	NA	NA	False	NA	NA	NA	105876477	105760553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105761464_105788603_105788709_105876377
transcript_130237.known	chr7	-	1470	4	FSM	ENSG00000146776.15	ENST00000318724.8	1470	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	23.6126143312331	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTTTCCTCATATATAA	7	True	NA	NA	False	AATAAA	-18	NA	105876582	105760372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105761464_105788603_105788709_105875811_105875881_105876377
transcript_130238.known	chr7	-	410	3	FSM	ENSG00000146776.15	ENST00000464874.1	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	25.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGCCGTATGTAACT	806	False	NA	-1	True	AATAAA	-21	NA	105876574	105875090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105875235_105875811_105875881_105876377
transcript_130239.known	chr7	+	610	1	FSM	ENSG00000226624.1	ENST00000442083.1	610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGTAAAGACTGTTTAT	19	False	NA	NA	False	AATACA	-36	NA	105819491	105820101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105819500_105820100
transcript_130243.known	chr7	-	2127	6	FSM	ENSG00000008282.9	ENST00000011473.6	2127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	243.305569192322	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	-10	True	NA	NA	False	AATAAA	-15	NA	106112576	106090504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139_106112212_106112478
transcript_130246.known	chr7	-	2130	5	FSM	ENSG00000008282.9	ENST00000455385.7	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_1	28.1424945589406	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	301	False	106112346	NA	False	AATAAA	-15	NA	106112312	106090504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_130248.known	chr7	-	2265	11	FSM	ENSG00000105835.13	ENST00000681936.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	234.355819215141	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAATGTCTAGGCACT	0	True	NA	NA	False	ATTAAA	-16	NA	106284544	106250430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272656_106274945_106275050_106277022_106277180_106284347
transcript_130249.known	chr7	-	2598	11	FSM	ENSG00000105835.13	ENST00000681878.1	2598	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	197.591497792795	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTTATTAATTTTAAA	940	False	NA	-20	True	ATTAAA	-22	NA	106284971	106250038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275041_106277022_106277180_106284827
transcript_130254.known	chr7	-	4255	11	FSM	ENSG00000105835.13	ENST00000679873.1	4255	11	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_9	182.299094896272	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAATATGTACTCAAC	-13	True	NA	-83	True	NA	NA	NA	106285009	106248367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277083_106277180_106284827
transcript_130256.known	chr7	-	7554	10	FSM	ENSG00000105835.13	ENST00000680669.1	7554	10	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_6	37.3511862075505	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCTATTAGTGAAGTGT	940	False	NA	-24	True	AATAAA	-16	NA	106284971	106248308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106272659_106274945_106275050_106277022_106277180_106284827
transcript_130257.known	chr7	-	2464	10	FSM	ENSG00000105835.13	ENST00000679951.1	2464	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	203.551855861575	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACATCATTTATTAATTT	938	False	NA	-24	True	ATTAAA	-18	NA	106284973	106250042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106251194_106253016_106253152_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_130260.known	chr7	+	847	1	FSM	ENSG00000273320.1	ENST00000609281.1	847	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGAAGTCAGTATATA	19	True	NA	NA	False	AATAAA	-21	NA	106285479	106286326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_106285500_106286300
transcript_130261.known	chr7	-	1495	8	FSM	ENSG00000105835.13	ENST00000354289.9	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_3	39.0143877176048	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTGTTTATGTTGGTA	719	False	NA	NA	False	TATAAA	-17	NA	106285192	106261489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_130263.known	chr7	+	3689	11	FSM	ENSG00000005249.13	ENST00000265717.5	3689	11	0	0	0	0	multi-exon	TRUE	canonical	3	281	junction_5	51.9893258275196	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGATGTCATTATTTA	-10	True	NA	13	True	ATTAAA	-16	NA	107044704	107161811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921_107151024_107153176_107153252_107156983_107157050_107157185_107157325_107159448
transcript_130267.known	chr7	-	4658	22	FSM	ENSG00000164597.15	ENST00000297135.9	4658	22	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	15.8128223753359	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTAATCCTATATAT	-5	True	NA	-21	True	AATAAA	-30	NA	107563920	107201371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107203631_107210525_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_130273.known	chr7	-	5418	21	FSM	ENSG00000164597.15	ENST00000393603.7	5418	21	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	16.0078105935821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCCTTCCTGTTTTCTT	233	False	NA	NA	False	AATAAA	-18	NA	107564261	107207847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_13028.known	chr1	-	1835	3	FSM	ENSG00000214796.9	ENST00000443294.6	1982	3	147	0	12	0	multi-exon	FALSE	canonical	3	93	junction_1	49	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTCAAGCGATTCTCC	9	True	NA	NA	False	NA	NA	NA	202861608	202851827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202853281_202858881_202859103_202861447
transcript_130280.nic	chr7	-	2047	12	ISM	ENSG00000164597.15	ENST00000393603.7	5418	21	327	89598	0	-60791	5prime_fragment	FALSE	canonical	3	124	junction_1	15.9394515496136	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGAATGTACTCATCC	-19	True	NA	NA	False	NA	NA	NA	107563934	107297445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_130283.nnic	chr7	-	902	7	NNC	ENSG00000164597.15	novel	576	6	NA	NA	0	67774	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.1290960526203	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTGAAATCCTTGCCT	-19	True	NA	NA	False	AATAAA	-28	NA	107563934	107459462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_107459789_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_130284.known	chr7	-	576	6	FSM	ENSG00000164597.15	ENST00000605888.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	6.73498329619309	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTTTTTTTTT	-19	True	NA	NA	False	AATGAA	-5	NA	107563934	107527236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_130286.nic	chr7	-	568	5	ISM	ENSG00000164597.15	ENST00000605888.1	576	6	0	20761	0	0	5prime_fragment	FALSE	canonical	3	147	junction_1	5.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGGAGAAAAAAATAC	-19	True	NA	NA	False	NA	NA	NA	107563934	107547997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_13029.known	chr1	-	631	3	FSM	ENSG00000214796.9	ENST00000430114.2	1112	3	0	481	0	-481	multi-exon	FALSE	canonical	3	97	junction_1	47	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGCCGTGCATCATC	-3	True	NA	NA	False	AAAAAG	-14	NA	202861620	202857927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202858165_202858881_202859103_202861447
transcript_130291.known	chr7	+	2704	11	FSM	ENSG00000105856.14	ENST00000468410.5	2704	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	32.996363435991	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTTATCTCTG	833	False	NA	14	True	AATAAA	-6	NA	107168960	107202508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_130293.known	chr7	+	2834	11	FSM	ENSG00000105856.14	ENST00000222574.9	2834	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	49.6624606720207	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	4	True	NA	28	True	AATAAA	-20	NA	107169002	107202522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_130294.nic	chr7	+	3132	11	NIC	ENSG00000105856.14	novel	2420	12	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	58.0042239841203	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	619	False	NA	28	True	AATAAA	-20	NA	107169649	107202522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_107170131_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_130295.nic	chr7	+	1632	10	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	7	2177	7	0	5prime_fragment	FALSE	canonical	3	100	junction_1	34.0047200790467	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTATCCGTGCAGG	840	False	NA	3	True	AATAAA	-16	NA	107168967	107200331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159
transcript_130301.nic	chr7	+	2431	9	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	7	5386	7	0	5prime_fragment	FALSE	canonical	3	100	junction_1	35.9687364248454	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTGCCTGTACCCTTA	840	False	NA	13	True	AATAAA	-22	NA	107168967	107197122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833
transcript_130309.known	chr7	+	2332	8	FSM	ENSG00000105856.14	ENST00000498408.1	2332	8	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	11.2503968183984	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTGCCTGTACCCTTA	68	False	NA	13	True	AATAAA	-22	NA	107179917	107197122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833
transcript_130310.known	chr7	+	476	2	FSM	ENSG00000105856.14	ENST00000607681.1	476	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTATCCGTGCAGG	9664	False	NA	3	True	AATAAA	-16	NA	107195847	107200331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107196152_107200159
transcript_130311.known	chr7	+	3561	15	FSM	ENSG00000288558.2	ENST00000673757.1	3561	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	84.6036376889557	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGCACTTTGAAGAGC	-2	True	NA	NA	False	AATACA	-43	NA	107563970	107620050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107613653_107613733_107618327
transcript_130313.nic	chr7	+	1528	8	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	21.1119465164699	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	-28	True	NA	NA	False	AATAAA	-2	NA	107563944	107577909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_130316.known	chr7	+	2266	8	FSM	ENSG00000105865.11	ENST00000265720.8	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	13.6785248040981	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTGCCATCTTTT	-2	True	NA	113	True	AATGAA	-16	NA	107563970	107578523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_13032.nnic	chr1	+	1288	3	NNC	ENSG00000234996.4	novel	2321	3	NA	NA	-676	61	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	15.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAGCAGAGTTTATTTT	NA	False	NA	NA	False	ATTAAA	-11	NA	202861077	202875302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_202861810_202873056_202873156_202874845
transcript_130323.known	chr7	+	1676	8	FSM	ENSG00000105865.11	ENST00000443233.5	1676	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.1174740160604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATGGGTAGAGTGGGA	15	True	NA	NA	False	NA	NA	NA	107563987	107577850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107564248_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573884_107575187_107575311_107576365_107576593_107577312
transcript_130327.known	chr7	+	1375	7	FSM	ENSG00000105865.11	ENST00000431839.5	1375	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	25.1047804212664	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	7	True	NA	NA	False	AATAAA	-2	NA	107563979	107577909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107575187_107575311_107576365_107576593_107577312
transcript_13034.nnic	chr1	+	1472	2	NIC	ENSG00000234996.4	novel	2321	3	NA	NA	-26	120	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	0	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGTCCTTGAAGCTTG	NA	False	NA	7	True	AATAAA	-21	NA	202861727	202874446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_202861810_202873056
transcript_130340.known	chr7	+	942	7	FSM	ENSG00000075790.12	ENST00000465919.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	73.291654822815	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGGTGGCTGTTTAC	-1	True	NA	-35	True	AATATA	-41	NA	107580245	107618615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107580302_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_130359.known	chr7	+	1610	7	FSM	ENSG00000105865.11	ENST00000422290.5	1610	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	24.8646335183127	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGGAAATTCTGAATAGA	-15	True	NA	NA	False	AAAAAG	-40	NA	107563957	107578015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107575187_107575311_107576408_107576593_107577312
transcript_130360.known	chr7	+	2911	8	FSM	ENSG00000075790.12	ENST00000005259.9	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	22.5125815163569	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTGCATATTAAATT	-1	True	NA	12	True	AATAAA	-20	NA	107580245	107620478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_130361.known	chr7	+	1157	9	FSM	ENSG00000075790.12	ENST00000445771.6	1157	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	85.7292248885991	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTCCAAAATTAGAAGTT	18	True	NA	14	True	AATAAA	-23	NA	107580264	107618664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107613653_107613733_107618327
transcript_130362.known	chr7	+	573	7	FSM	ENSG00000105879.12	ENST00000432748.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	153.678958293653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTCTCTTCATGTGT	-5	True	NA	NA	False	NA	NA	NA	107744141	107758180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107744177_107748879_107749048_107752544_107752618_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_130365.known	chr7	+	3987	6	FSM	ENSG00000105879.12	ENST00000440859.8	3987	6	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	64.8647824323801	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTAGATGAATTTTT	-5	True	NA	NA	False	AATAAA	-19	NA	107744141	107761667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107744177_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_130368.known	chr7	+	1506	6	FSM	ENSG00000105879.12	ENST00000420796.1	1506	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	149.274780187411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCACCAATGACCTCTG	290	False	NA	NA	False	NA	NA	NA	107744436	107758820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107744838_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_13037.known	chr1	-	3311	12	FSM	ENSG00000117153.16	ENST00000367261.8	3311	12	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	22.5480203818538	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGAGAGTTTGTGGCTAA	-4	True	NA	-24	True	ATTAAA	-17	NA	202927234	202891119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202892660_202893238_202893426_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_130370.known	chr7	+	587	4	FSM	ENSG00000105879.12	ENST00000493361.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	127.88102109209	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAATTAGAATAATTTC	-2	True	NA	NA	False	AATAAA	-2	NA	107744144	107754183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107744177_107748879_107749048_107753413_107753512_107753894
transcript_130372.known	chr7	-	553	2	FSM	ENSG00000241764.5	ENST00000609979.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAAGGAGCACAATTA	528	False	NA	NA	False	NA	NA	NA	107744050	107742968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107743404_107743932
transcript_130373.known	chr7	-	651	2	FSM	ENSG00000241764.5	ENST00000440971.2	651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGCACAATTAATGGAAA	-3	True	NA	NA	False	AATAGA	-2	NA	107744581	107742961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107743404_107744372
transcript_130374.known	chr7	-	772	2	FSM	ENSG00000241764.5	ENST00000663315.2	776	2	1	3	1	2	multi-exon	FALSE	canonical	3	9	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTGTAGTTGTACGG	3	True	NA	-2	True	AATAAA	-20	NA	107743606	107742753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107743404_107743484
transcript_130375.known	chr7	-	657	2	FSM	ENSG00000241764.5	ENST00000457510.2	657	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTCTTAGAGAAATGTTT	450	False	NA	-10	True	AATAAA	-14	NA	107744128	107742816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107743404_107744058
transcript_130379.known	chr7	-	5650	34	FSM	ENSG00000091136.15	ENST00000222399.11	5650	34	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_33	41.4244973501943	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	6	True	NA	-9	True	AATAAA	-21	NA	108003161	107923798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_130387.known	chr7	+	3537	14	FSM	ENSG00000091140.15	ENST00000205402.10	3537	14	0	0	0	0	multi-exon	FALSE	canonical	3	974	junction_10	113.609733727499	2212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGTTATCTACTAAGC	14	True	NA	29	True	AATAAA	-33	NA	107891182	107921198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_130395.known	chr7	+	1993	13	FSM	ENSG00000091140.15	ENST00000440410.5	1993	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	339.91456238623	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTATAAACCGAACT	4	True	NA	-16	True	NA	NA	NA	107891172	107919713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_130401.known	chr7	-	4569	11	FSM	ENSG00000135241.17	ENST00000257694.13	4569	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	29.5805679458661	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGCTTCTTTCTTTCT	-20	True	NA	NA	False	AATACA	-19	NA	108526135	108470416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108521475_108521522_108526028
transcript_130411.known	chr7	-	3366	10	FSM	ENSG00000135241.17	ENST00000453144.5	3366	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	42.6730319326034	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTGTTAAAAGGCTAAT	1845	False	NA	-14	True	AATAAA	-13	NA	108526315	108471626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515448_108526028
transcript_130412.known	chr7	-	3462	10	FSM	ENSG00000135241.17	ENST00000436062.5	3462	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	30.1809358517739	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTATCATTAACAAAAATA	1842	False	NA	-48	True	TATAAA	-27	NA	108526318	108471660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_130416.known	chr7	-	4268	10	FSM	ENSG00000135241.17	ENST00000426128.6	4268	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	54.7792427119869	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCATGGCTTCTTTC	44	True	NA	NA	False	AATACA	-14	NA	108526071	108470421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108472676_108479183_108479380_108487944_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_130427.known	chr7	-	3384	3	FSM	ENSG00000177683.14	ENST00000415914.4	3384	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	13	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCTGAAAATCCAAAATG	-42	True	NA	89	True	AATAAA	-18	NA	108569706	108562131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108565106_108565829_108566023_108569489
transcript_130430.known	chr7	-	868	3	FSM	ENSG00000177683.14	ENST00000438865.1	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	31	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCCATTTTTGTAC	2132	False	NA	NA	False	AATAAA	-6	NA	108569750	108564569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108565106_108565951_108566023_108569489
transcript_130433.known	chr7	-	880	2	FSM	ENSG00000177683.14	ENST00000493722.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGGCAGAAAGTCTCT	19	True	NA	NA	False	TATAAA	-9	NA	108569645	108564381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108565106_108569489
transcript_130436.known	chr7	-	425	2	FSM	ENSG00000177683.14	ENST00000468884.1	425	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACAGTATTTTTAAT	2285	False	NA	NA	False	ATTAAA	-22	NA	108569597	108554542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108554860_108569489
transcript_130437.known	chr7	-	1051	2	FSM	ENSG00000177683.14	ENST00000484452.1	1051	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCACTAGCATAATAAGC	-24	True	NA	NA	False	AATAAA	-38	NA	108569688	108565170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108566023_108569489
transcript_130438.known	chr7	-	735	2	FSM	ENSG00000135241.17	ENST00000427008.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTCTATAACCACAAAAT	-8	True	NA	NA	False	NA	NA	NA	108526123	108514913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108515575_108526049
transcript_130439.known	chr7	+	2409	3	FSM	ENSG00000128590.5	ENST00000249356.4	2409	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	9.5	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGCTGAGGATTATCT	-8	True	NA	9	True	AATAAA	-18	NA	108569873	108574850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_108570104_108571716_108571944_108572898
transcript_130446.nnic	chr7	-	840	6	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-137	-11821	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	5.11468474101777	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	109597303	109533801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109534029_109559035_109559130_109562744_109562836_109565250_109565333_109577104_109577188_109597040
transcript_13045.nnic	chr1	-	2039	8	NNC	ENSG00000159346.13	novel	2091	8	NA	NA	280	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	394.965614623215	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-1	True	NA	-8	True	AATAAA	-31	NA	202957984	202940831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202957908
transcript_130452.nnic	chr7	-	763	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-143	-11821	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	7.03562363973514	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	109597309	109533801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109534029_109559035_109559130_109562744_109562836_109565250_109565333_109597040
transcript_130454.nnic	chr7	-	746	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-137	-11821	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	6.02079728939615	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	109597303	109533801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109577104_109577188_109597040
transcript_130455.nnic	chr7	-	1143	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-141	-11821	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	9.24662100445346	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	109597307	109533801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109595209_109595686_109597040
transcript_13046.known	chr1	-	2091	8	FSM	ENSG00000159346.13	ENST00000340990.10	2091	8	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_3	49.5864530545452	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-22	True	NA	-8	True	AATAAA	-31	NA	202958312	202940831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202958184
transcript_130461.nnic	chr7	-	775	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-143	-14920	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.61321658847611	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTTTATTAGGAGTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	109597309	109536900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109537140_109559035_109559130_109562744_109562836_109565250_109565333_109597040
transcript_130467.nnic	chr7	-	669	4	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-143	-11821	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_2	6.16441400296898	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	NA	False	NA	-3	True	AATAAA	-17	NA	109597309	109533801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109597040
transcript_130474.nnic	chr7	-	1247	3	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-141	-42848	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	10.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCAGACAATGGTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	109597307	109564828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109565333_109595209_109595686_109597040
transcript_13048.known	chr1	-	1624	9	FSM	ENSG00000159348.13	ENST00000367249.9	1624	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	9.48683298050514	660	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTGTGTCTGGGGTC	-11	True	NA	-4	True	AATAAA	-31	NA	202967257	202961872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966527_202966601_202966748_202966899_202967190
transcript_130485.nic	chr7	-	839	3	ISM	ENSG00000184903.10	ENST00000450877.5	761	5	429348	-372	-2	0	3prime_fragment	FALSE	canonical	3	101	junction_1	5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCCTGTTTTGAGTA	NA	False	NA	-8	True	AATAAA	-12	NA	110963567	110663053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_110663722_110886592_110886696_110963499
transcript_130486.nic	chr7	-	682	3	ISM	ENSG00000184903.10	ENST00000450877.5	761	5	429348	-215	-2	-3	3prime_fragment	FALSE	canonical	3	101	junction_1	5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTATTTGTCACTTGCT	NA	False	NA	-14	True	AATAAA	-25	NA	110963567	110663210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_110663722_110886592_110886696_110963499
transcript_130491.nnic	chr7	-	416	3	NNC	ENSG00000184903.10	novel	2130	6	NA	NA	-11	-72076	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	39.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCATGATTTTGCCAAGT	NA	False	NA	NA	False	AATAAA	-24	NA	111562528	111559315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_111559594_111561850_111561924_111562463
transcript_130493.known	chr7	-	1205	7	FSM	ENSG00000184903.10	ENST00000331762.7	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	21.0765799460496	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCCTGTTTTGAGTA	NA	False	NA	-8	True	AATAAA	-12	NA	111562517	110663053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_110663722_110886592_110886696_110963499_110963566_111487237_111487342_111521312_111521450_111561850_111561924_111562463
transcript_130494.known	chr7	-	580	2	FSM	ENSG00000184903.10	ENST00000487733.5	580	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTCACTTGCTGTT	NA	False	NA	-11	True	AATAAA	-28	NA	110963565	110663207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_110663722_110963499
transcript_130495.known	chr7	-	421	5	FSM	ENSG00000184903.10	ENST00000452753.1	421	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.0337609693302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAGTAACTCAGAAGCA	-21	True	NA	NA	False	NA	NA	NA	111562504	111487239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_111487342_111521312_111521450_111532517_111532586_111561850_111561924_111562463
transcript_130501.known	chr7	+	1736	12	FSM	ENSG00000198839.10	ENST00000361946.8	1736	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.2719714889747	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCAGTCTCCTCCCCA	-9	True	NA	80	True	TATAAA	-18	NA	112206694	112343094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112206808_112286876_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083_112330217_112336103_112336172_112337729_112337827_112339842_112339886_112340871_112341047_112342560
transcript_13051.known	chr1	+	3031	8	FSM	ENSG00000163444.12	ENST00000367242.4	3031	8	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_3	156.580291719942	1243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTCAGCTCTGAGTT	-10	True	NA	13	True	AATAAA	-19	NA	203007373	203024848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203007575_203007773_203007864_203008642_203008811_203014888_203015049_203015959_203016141_203018480_203018562_203020792_203020949_203022854
transcript_130513.known	chr7	+	1075	7	FSM	ENSG00000198839.10	ENST00000450657.1	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	13.7406533889606	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATTTGGATATCCAC	-3	True	NA	NA	False	NA	NA	NA	112206700	112330474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112206808_112286872_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083
transcript_130520.known	chr7	+	2218	2	FSM	ENSG00000198839.10	ENST00000421043.5	2218	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTATGTGTAGCATCT	-7	True	NA	NA	False	NA	NA	NA	112206696	112288979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112206808_112286872
transcript_130525.known	chr7	+	1834	13	FSM	ENSG00000006652.15	ENST00000005558.8	1834	13	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	87.7114904419914	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAAGACTATTTTCTA	-16	True	NA	NA	False	NA	NA	NA	112423143	112475527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112423433_112450507_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_130527.known	chr7	+	3650	13	FSM	ENSG00000006652.15	ENST00000675578.1	3650	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	91.0091570484348	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTATAAATAAATAATGAA	434	False	NA	-26	True	NA	NA	NA	112422886	112477156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112423433_112450577_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_130529.known	chr7	+	3232	12	FSM	ENSG00000006652.15	ENST00000621379.4	3232	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	95.5076908330657	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	-16	True	NA	18	True	AATAAA	-32	NA	112423143	112477200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112423433_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_130532.known	chr7	+	3397	12	FSM	ENSG00000006652.15	ENST00000535603.5	3397	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	95.7589950029079	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	140	False	NA	18	True	AATAAA	-32	NA	112452057	112477200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112452512_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_130535.known	chr7	+	3269	12	FSM	ENSG00000006652.15	ENST00000403825.8	3269	12	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	48.8157270417185	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTTTGTTTTTGAG	1	True	NA	21	True	AATAAA	-35	NA	112450459	112477203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_130536.known	chr7	+	1938	4	FSM	ENSG00000006652.15	ENST00000429071.5	1938	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	10.7082522694727	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTAATAAATGTATT	-1	True	NA	NA	False	NA	NA	NA	112450457	112458336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913
transcript_130537.known	chr7	+	2364	13	FSM	ENSG00000006652.15	ENST00000674915.1	2364	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	115.098599035783	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAAAGATTTTTTTCC	1	True	NA	-15	True	NA	NA	NA	112450459	112476163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112470898_112471034_112472218_112472348_112472765_112472862_112475429
transcript_130543.known	chr7	-	7276	5	FSM	ENSG00000146802.13	ENST00000312814.11	7276	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	18.7932833746528	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCATTAATTTTTAATAT	-2	True	NA	NA	False	ATTAAA	-29	NA	112790393	112762376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112790159
transcript_130546.known	chr7	-	1291	4	FSM	ENSG00000146802.13	ENST00000447395.5	1291	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	60.5034434281774	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTATGCTGTATTTT	291	False	NA	NA	False	NA	NA	NA	112790423	112767135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112790159
transcript_130547.known	chr7	-	3940	5	FSM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	10.779030568655	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	-22	True	NA	-2	True	ATTAAA	-20	NA	112939875	112819146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939590
transcript_130548.nnic	chr7	-	1559	5	NNC	ENSG00000164603.12	novel	3940	5	NA	NA	0	-8528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.0836101867335	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTAAAGCATCAAGCAT	-22	True	NA	NA	False	NA	NA	NA	112939875	112830880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_112831439_112832272_112832676_112895568_112895740_112915305_112915448_112939590
transcript_130549.nic	chr7	-	1261	4	ISM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	12866	0	-9660	5prime_fragment	FALSE	canonical	3	43	junction_1	9.0921211313239	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTTCAGTAGATTACAG	-22	True	NA	NA	False	NA	NA	NA	112939875	112832012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_112832676_112895568_112895740_112915305_112915448_112939590
transcript_130551.nic	chr7	-	1454	2	ISM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	95132	0	-91926	5prime_fragment	FALSE	canonical	3	65	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAGAGGCTAAATAAATA	-22	True	NA	NA	False	NA	NA	NA	112939875	112914278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_112915448_112939590
transcript_130552.known	chr7	-	962	3	FSM	ENSG00000214194.9	ENST00000441359.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	168.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAATGTTAAAAAAA	-6	True	NA	NA	False	AAAACA	-45	NA	113118560	113116860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_113117608_113118067_113118162_113118439
transcript_130553.known	chr7	-	1011	3	FSM	ENSG00000214194.9	ENST00000397764.8	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	54.5	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGTGTCCATTTCTTA	0	True	NA	0	True	ATTAAA	-27	NA	113118554	113116717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_113117608_113118067_113118162_113118527
transcript_130554.known	chr7	-	818	2	FSM	ENSG00000214194.9	ENST00000413744.1	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACATACATTTATAAATT	79	False	NA	NA	False	AGTAAA	-43	NA	113118534	113117256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_113117608_113118067
transcript_130557.known	chr7	-	316	1	FSM	ENSG00000236580.1	ENST00000449443.1	316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCCCCTGCCCTGCCCTC	NA	False	NA	NA	False	AAGAAA	-5	NA	114297429	114297113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_114297100_114297400
transcript_130559.known	chr7	+	816	5	FSM	ENSG00000225535.7	ENST00000669990.1	816	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.11803398874989	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGACTCTGCTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	115030647	115125935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_115030769_115031786_115031826_115118732_115118826_115122177_115122248_115125442
transcript_130562.known	chr7	+	2953	3	FSM	ENSG00000105971.15	ENST00000222693.5	2953	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	4.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGTATTGCTTTT	10	True	NA	16	True	AATAAA	-16	NA	116499737	116508541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116499932_116500259_116500448_116505970
transcript_130565.known	chr7	+	2736	7	FSM	ENSG00000135269.18	ENST00000358204.9	2736	7	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	19.3254294188311	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	1	True	NA	NA	False	AATAAA	-17	NA	116210538	116258783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_130572.known	chr7	+	873	3	FSM	ENSG00000135269.18	ENST00000461440.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	28.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCTTAAGATGGTAAAG	-32	True	NA	NA	False	NA	NA	NA	116210505	116249577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116210735_116234533_116234620_116249019
transcript_130576.known	chr7	+	2456	3	FSM	ENSG00000105974.13	ENST00000341049.7	2456	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	49.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	0	True	NA	16	True	AATAAA	-18	NA	116525035	116561179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116525093_116526524_116526690_116558945
transcript_130579.known	chr7	+	1653	3	FSM	ENSG00000105974.13	ENST00000451122.5	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	55	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACCTCAACTGCCTA	8	True	NA	NA	False	AAAAAG	-8	NA	116525008	116559636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116525806_116526524_116526690_116558945
transcript_130583.known	chr7	+	845	3	FSM	ENSG00000105974.13	ENST00000393468.1	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	50.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTTATTTGCATGT	469	False	NA	87	True	TTTAAA	-21	NA	116526276	116559513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116526389_116526524_116526690_116558945
transcript_130588.known	chr7	+	2628	2	FSM	ENSG00000105974.13	ENST00000393467.1	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCAGCTTTATTATT	485	False	NA	13	True	AATAAA	-15	NA	116526292	116561176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116526690_116558945
transcript_13059.known	chr1	+	2219	3	FSM	ENSG00000163485.17	ENST00000367235.1	2219	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGGCCTGCCCGTTGCCG	-8	True	NA	NA	False	NA	NA	NA	203128305	203166749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203128433_203128784_203129183_203165055
transcript_130591.known	chr7	+	2652	3	FSM	ENSG00000105974.13	ENST00000405348.6	2652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	-2	True	NA	16	True	AATAAA	-18	NA	116525530	116561179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116525784_116526524_116526690_116558945
transcript_130593.nnic	chr7	+	1845	12	NNC	ENSG00000105976.16	novel	741	6	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	13.6181696807811	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCATTCCTAGTTGTT	NA	False	NA	31	True	AATAAA	-43	NA	116724043	116769909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_116724165_116724771_116724848_116731667_116731860_116739949_116740085_116740851_116741026_116755354_116755516_116757436_116757540_116757637_116757775_116758458_116758621_116759390_116759491_116763049_116763269_116769644
transcript_130595.nic	chr7	+	1120	2	ISM	ENSG00000105976.16	ENST00000318493.11	6876	21	194	98375	0	403	5prime_fragment	FALSE	canonical	3	35	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAAAGAAGGAAGT	-13	True	NA	NA	False	AAAAAG	-1	NA	116672389	116700002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_116672578_116699070
transcript_130603.known	chr7	+	1214	10	FSM	ENSG00000198898.15	ENST00000426421.5	1214	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	454.283318352472	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATGTCTTTTGGTTTA	19	True	NA	NA	False	NA	NA	NA	116862599	116918188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910212_116910312_116912068_116912141_116916059_116916123_116917726
transcript_130607.known	chr7	+	5068	10	FSM	ENSG00000198898.15	ENST00000361183.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	70.8895855068524	1986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGTTCATTGCAAATG	6	True	NA	NA	False	ATTAAA	-18	NA	116862586	116922049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910232_116910312_116912068_116912141_116916059_116916123_116917726
transcript_130618.known	chr7	+	898	6	FSM	ENSG00000198898.15	ENST00000464669.1	898	6	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	80.5347130124644	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGATTGCTTTGTACTTGG	33	False	NA	NA	False	NA	NA	NA	116862613	116906736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262
transcript_130620.known	chr7	+	809	5	FSM	ENSG00000198898.15	ENST00000490693.5	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	88.2907129883999	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTCTGTATTTTA	19	True	NA	NA	False	AATAAA	-18	NA	116862599	116904754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176
transcript_130626.known	chr7	+	621	2	FSM	ENSG00000198898.15	ENST00000461878.5	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCATGCT	22	True	NA	NA	False	NA	NA	NA	116862602	116888699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126
transcript_13063.known	chr1	+	1275	3	FSM	ENSG00000159388.6	ENST00000475157.1	1275	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTACTTTAATAAAAAT	NA	False	NA	-18	True	NA	NA	NA	203305490	203309569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203305749_203307103_203307689_203309137
transcript_130636.known	chr7	+	2093	16	FSM	ENSG00000004866.22	ENST00000323984.8	2093	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	20.9799904671094	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGGGAACCTGGATC	3	True	NA	8	True	AATAAA	-19	NA	116953500	117230176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
transcript_13064.known	chr1	+	2729	2	FSM	ENSG00000159388.6	ENST00000290551.5	2729	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGGTGTAGAGAAGT	0	True	NA	15	True	AATAAA	-17	NA	203305518	203309602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203305749_203307103
transcript_130641.nnic	chr7	+	1081	4	NNC	ENSG00000001626.17	novel	423	2	NA	NA	-150	14054	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTATGTAACTGTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	117689562	117730025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_117689922_117715757_117715972_117729430_117729653_117729739
transcript_130643.nnic	chr7	+	801	3	NNC	ENSG00000001626.17	novel	423	2	NA	NA	-12	1370	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGACCTTTATGTTATCAC	NA	False	NA	NA	False	AATAAA	-28	NA	117689700	117717341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_117689922_117715757_117715972_117716975
transcript_130645.known	chr7	-	5904	23	FSM	ENSG00000077063.11	ENST00000160373.8	5904	23	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	11.2991808377115	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGCTGTACTTTTTA	-8	True	NA	-3	True	AATAAA	-18	NA	117873441	117710650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791127_117792782_117810764_117810990_117861208_117861317_117873334
transcript_130646.known	chr7	-	570	4	FSM	ENSG00000077063.11	ENST00000454375.5	570	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.6637929966641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCTCTCAGGCAAAGT	-2	True	NA	-65	True	NA	NA	NA	117872220	117792661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_117792782_117810764_117810990_117861208_117861317_117872103
transcript_130654.known	chr7	+	12384	4	FSM	ENSG00000128534.8	ENST00000249299.7	12384	4	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_3	53.1308656892478	4207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAATGTCCATGTTTTT	-3	True	NA	NA	False	AATAAA	-18	NA	118184163	118204035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_118184255_118185653_118185695_118188277_118188406_118191911
transcript_130656.nic	chr7	+	680	4	NIC	ENSG00000128534.8	novel	1920	3	NA	NA	-114	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	312.463686779049	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	NA	False	NA	-7	True	ATTAAA	-29	NA	118184029	118192164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_118184281_118185646_118185695_118188277_118188406_118191911
transcript_130658.known	chr7	+	4030	3	FSM	ENSG00000128534.8	ENST00000424702.1	4030	3	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	51	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTTTTTTTTT	17	True	NA	-16	True	ATTAAA	-20	NA	118184143	118192155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_118184255_118185653_118185695_118188277
transcript_13066.known	chr1	-	2943	3	FSM	ENSG00000122176.12	ENST00000354955.5	2943	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACAAGAGTGGAGTCATT	5	True	NA	-5	True	AATAAA	-18	NA	203351122	203340627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_203342495_203347291_203348278_203351032
transcript_13067.known	chr1	+	5769	3	FSM	ENSG00000188783.6	ENST00000343110.3	5769	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	6	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCGCTTC	2	True	NA	13	True	AATAAA	-22	NA	203475805	203491352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203475939_203483168_203484158_203486705
transcript_130676.nnic	chr7	-	644	3	NNC	ENSG00000231295.1	novel	547	3	NA	NA	-30112	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAATGACATATATTGT	NA	False	NA	-11	True	AATAAA	-21	NA	120782626	120746730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_120746907_120780346_120780526_120782337
transcript_130680.known	chr7	-	1495	9	FSM	ENSG00000106025.9	ENST00000415871.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	79.8998396431432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATACCCACTGTGTAG	-1	True	NA	NA	False	NA	NA	NA	120858323	120788373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819_120857989_120858203
transcript_130684.nic	chr7	-	2405	8	NIC	ENSG00000106025.9	novel	2585	8	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	81.6997989156469	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	1092	False	NA	-2	True	AATAAA	-18	NA	120857230	120787319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857085
transcript_130685.nic	chr7	-	2410	8	NIC	ENSG00000106025.9	novel	2585	8	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	83.4141376946794	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	940	False	NA	-2	True	AATAAA	-18	NA	120857382	120787319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857232
transcript_130686.known	chr7	-	2585	8	FSM	ENSG00000106025.9	ENST00000222747.8	2585	8	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_6	16.5788160873189	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-37	True	NA	-2	True	AATAAA	-18	NA	120858144	120787319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
transcript_13069.known	chr1	+	1434	8	FSM	ENSG00000188770.10	ENST00000367222.7	1434	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.97948663722157	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGCCCACACAGAACG	11	True	NA	89	True	NA	NA	NA	203494152	203508949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203494218_203495964_203496237_203496976_203497116_203498680_203498840_203499648_203499852_203502913_203503010_203503549_203503746_203508645
transcript_130697.nnic	chr7	-	537	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-31	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	27.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	1092	False	NA	-15	True	AATAAA	-19	NA	120857230	120855125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_120855382_120856697_120856834_120857085
transcript_130698.nnic	chr7	-	542	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-29	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	30	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	940	False	NA	-15	True	AATAAA	-19	NA	120857382	120855125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_120855382_120856697_120856834_120857232
transcript_130699.nnic	chr7	-	719	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-2	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_1	84.5	163	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	-39	True	NA	-15	True	AATAAA	-19	NA	120858146	120855125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_120855382_120856697_120856834_120857819
transcript_130700.known	chr7	+	3749	12	FSM	ENSG00000071243.16	ENST00000315870.10	3749	12	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	25.1323768003817	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGAGTGTTTGATAA	-9	True	NA	12	True	AATAAA	-22	NA	120950776	120977216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120964741_120964839_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_130703.known	chr7	+	1718	11	FSM	ENSG00000071243.16	ENST00000427726.5	1718	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	50.0779392547257	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGCTTCTAAAAAGAA	-1	True	NA	NA	False	TATAAA	-22	NA	120950784	120975290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_130706.known	chr7	+	1222	5	FSM	ENSG00000071243.16	ENST00000339121.9	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	67.2992384800898	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTATTCATCTC	NA	False	NA	8	True	CATAAA	-20	NA	120950762	120956980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120956159
transcript_130709.known	chr7	+	1723	4	FSM	ENSG00000071243.16	ENST00000445699.5	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	9.17726659862414	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTATTCATC	9	True	NA	6	True	CATAAA	-18	NA	120950794	120956978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558
transcript_13071.known	chr1	+	3004	20	FSM	ENSG00000058673.17	ENST00000367212.7	3004	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	198.189673833942	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGCCAAAAAACTGGACTTA	71	False	NA	NA	False	TTTAAA	-8	NA	203795698	203852430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203795776_203796292_203796497_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_130711.known	chr7	+	3150	4	FSM	ENSG00000002745.13	ENST00000222462.3	3150	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAAGTTTGACAAAGTT	-12	True	NA	NA	False	ATTAAA	-26	NA	121328999	121341104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_121329388_121329566_121329818_121331677_121331965_121338880
transcript_130715.known	chr7	-	2455	10	FSM	ENSG00000196937.11	ENST00000359943.8	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_6	81.2346091785703	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTCTTGGTTTTGCT	21	True	NA	-27	True	AATAAA	-28	NA	121396308	121348877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_121350551_121351142_121351270_121360042_121360128_121362896_121362948_121364129_121364189_121371299_121371424_121372109_121372140_121378909_121379015_121382956_121383011_121396161
transcript_130716.known	chr7	-	428	1	FSM	ENSG00000234985.2	ENST00000416734.1	428	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGATCCTACCTTCTTT	NA	False	NA	NA	False	NA	NA	NA	121441261	121440833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_121440800_121441300
transcript_130718.known	chr7	+	8103	30	FSM	ENSG00000106278.12	ENST00000393386.7	8103	30	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_12	102.93120198681	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGCTTGTGGAGC	0	True	NA	17	True	AATAAA	-19	NA	121873160	122062036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_130719.nic	chr7	+	4381	12	ISM	ENSG00000106278.12	ENST00000449182.1	4627	29	-256	48329	16	-280	5prime_fragment	FALSE	canonical	3	275	junction_3	30.9702603281501	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTATACATTCCGATGAAA	9	False	NA	NA	False	AATAAA	-4	NA	121873104	122013032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333
transcript_130720.nic	chr7	+	2618	9	ISM	ENSG00000106278.12	ENST00000449182.1	4627	29	-256	63685	16	-15636	5prime_fragment	FALSE	canonical	3	275	junction_3	34.7625876482174	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCCTAGCTTTCCAG	9	False	NA	NA	False	AAAAAG	-11	NA	121873104	121997676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381
transcript_130731.known	chr7	+	5633	31	FSM	ENSG00000106278.12	ENST00000651065.1	5633	31	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_23	139.954452908398	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAACACCTTACCAAAC	NA	False	NA	-62	True	AATAGA	-31	NA	121873088	122061957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122047673_122047791_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_130735.nic	chr7	+	1812	2	ISM	ENSG00000106278.12	ENST00000471837.1	568	3	-56	37509	16	-37509	5prime_fragment	FALSE	canonical	3	329	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTCAAGCCAGGTG	9	False	NA	NA	False	NA	NA	NA	121873104	121929514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_121873558_121928155
transcript_130736.known	chr7	+	549	5	FSM	ENSG00000106278.12	ENST00000470504.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	85.3093634954569	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGTGAGTCAACAAAATG	NA	False	NA	NA	False	AATAAA	-1	NA	122034012	122039584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453
transcript_13074.nic	chr1	+	4665	19	NIC	ENSG00000058673.17	novel	5015	20	NA	NA	-76	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	178.578586981741	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	21	False	NA	17	True	AATAAA	-18	NA	203795546	203854124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_203795795_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_130753.known	chr7	-	8554	22	FSM	ENSG00000008311.16	ENST00000681708.1	8554	22	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_16	1700.03731851796	1300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAAATTACAAATGCA	-1	True	NA	17	True	NA	NA	NA	122144308	122073564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_130758.nnic	chr7	+	1416	3	NNC	ENSG00000234418.3	novel	1406	8	NA	NA	-14	-37467	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGATCGGGCTAAAGGC	NA	False	NA	NA	False	NA	NA	NA	122144390	122177298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_122144497_122145987_122146059_122176059
transcript_130760.nnic	chr7	+	1165	2	NNC	ENSG00000234418.3	novel	1460	5	NA	NA	0	-37625	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTCTGGTCCATATTT	-13	True	NA	NA	False	ATTAAA	-14	NA	122144412	122177140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_122144497_122176059
transcript_130764.known	chr7	+	2653	7	FSM	ENSG00000230316.8	ENST00000428449.5	2653	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.52770798392567	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACACAGAGCAAAGA	28	False	NA	3	True	AATAAA	-18	NA	122303657	122310077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_122304269_122304572_122304744_122305287_122306263_122306515_122306661_122307302_122307489_122308486_122308558_122309583
transcript_130769.known	chr7	-	688	2	FSM	ENSG00000128610.12	ENST00000418046.1	688	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCGCGCACCCCAGAGC	8	True	NA	NA	False	NA	NA	NA	122310691	122304330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_122304512_122310184
transcript_13077.known	chr1	+	5917	18	FSM	ENSG00000058673.17	ENST00000367210.3	5917	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	168.76578229415	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTGTGAGCTAAGTA	-5	True	NA	17	True	AATAAA	-18	NA	203795622	203854124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203795795_203801574_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122_203830204_203831660_203831772_203833790_203833854_203837965_203838065_203840305_203840375_203847183_203847688_203848330_203848408_203849710_203850027_203850514_203850682_203851056_203851125_203852140
transcript_130771.known	chr7	+	768	2	ISM	ENSG00000230316.8	ENST00000437317.2	3039	4	0	2862	0	-2740	5prime_fragment	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAGGTGCACTTGTGCC	37	False	NA	NA	False	NA	NA	NA	122304949	122305817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_122305188_122305287
transcript_130772.nnic	chr7	+	939	2	NIC	ENSG00000230316.8	novel	2653	7	NA	NA	872	4	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACACAGAGCAAAGAACGA	667	False	NA	7	True	AATAAA	-22	NA	122305821	122310081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_122306263_122309583
transcript_130775.known	chr7	-	2435	4	FSM	ENSG00000128610.12	ENST00000442488.7	2435	4	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_3	13.7194104181711	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	1	True	NA	NA	False	AATAAA	-31	NA	122304750	122301302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636
transcript_130777.known	chr7	+	348	1	FSM	ENSG00000235459.5	ENST00000473326.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	23	False	NA	NA	False	NA	NA	NA	122681314	122681662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_122681300_122681700
transcript_130785.known	chr7	+	451	3	FSM	ENSG00000232524.1	ENST00000419832.1	451	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTATTAACAAAATATT	NA	False	NA	NA	False	AATAAA	-36	NA	123456628	123459856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_123456766_123457398_123457549_123459692
transcript_130787.known	chr7	-	5608	5	FSM	ENSG00000128609.16	ENST00000471770.5	5608	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	922.458671160936	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTGTGTGTATGTGC	472	False	NA	NA	False	TATAAA	-18	NA	123557780	123536996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557624
transcript_130789.known	chr7	-	1504	4	FSM	ENSG00000128609.16	ENST00000611607.4	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	946.236052297029	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	348	False	NA	-17	True	AATAAA	-24	NA	123557904	123541029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557774
transcript_130791.known	chr7	-	1670	6	FSM	ENSG00000128609.16	ENST00000679052.1	1670	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	979.960488999429	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCGCCTTCCTAGCTC	12	True	NA	-32	True	AATAAA	-9	NA	123557805	123541044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123546582_123546818_123550469_123550587_123557403_123557449_123557774
transcript_130792.known	chr7	-	1432	4	FSM	ENSG00000128609.16	ENST00000618945.4	1432	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	847.410696704313	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	348	False	NA	-17	True	AATAAA	-24	NA	123557904	123541029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123557403_123557449_123557774
transcript_130793.known	chr7	-	778	6	FSM	ENSG00000128609.16	ENST00000466896.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	977.846613738576	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCCTACAGATTTTCAA	16	True	NA	NA	False	ATTAAA	-4	NA	123557801	123541857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123557403_123557449_123557774
transcript_130794.known	chr7	-	2802	2	FSM	ENSG00000128609.16	ENST00000490618.1	2802	2	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGATA	-5	True	NA	NA	False	AAAAAG	-1	NA	123557822	123554694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123557449_123557774
transcript_130795.known	chr7	-	1429	6	FSM	ENSG00000128609.16	ENST00000378795.9	1429	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	978.360260844644	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTTAAGGTTAAACAAAAA	13	True	NA	-64	True	AAAACA	-33	NA	123557804	123541076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123544734_123544762_123545610_123545677_123550469_123550587_123557403_123557449_123557774
transcript_130796.known	chr7	-	1803	7	FSM	ENSG00000128609.16	ENST00000467117.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	830.574449803668	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCGCCTTCCTAGCTC	13	True	NA	-32	True	AATAAA	-9	NA	123557804	123541044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_130798.known	chr7	-	4363	11	FSM	ENSG00000106299.8	ENST00000223023.5	4363	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_7	25.1761792176653	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAATGTGTTTCATGT	-23	True	NA	-30	True	AATAAA	-22	NA	123749003	123681942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123684581_123689041_123689151_123692346_123692868_123694714_123694869_123695822_123695866_123696578_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_130801.nic	chr7	-	934	6	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-98	14698	-98	-14698	5prime_fragment	FALSE	canonical	3	233	junction_2	26.0353605698097	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGAAAAGCTAAAAAGAA	-23	True	NA	-4	True	AAGAAA	-6	NA	123749101	123696640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_130803.nic	chr7	-	754	4	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-98	24383	-98	-24383	5prime_fragment	FALSE	canonical	3	256	junction_1	20.3688214899363	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCGAAAAGCAGTTACAGA	-23	True	NA	NA	False	AATGAA	-16	NA	123749101	123706325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_123706374_123706739_123706827_123709088_123709224_123748617
transcript_130804.known	chr7	+	2099	1	FSM	ENSG00000272686.1	ENST00000607957.1	2099	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGTGAAGAACTTGATAG	NA	False	NA	NA	False	AATATA	-25	NA	123749067	123751166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_123749100_123751200
transcript_130806.nnic	chr7	+	667	4	NNC	ENSG00000242593.7	novel	1613	11	NA	NA	-70	-221760	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.24721912892465	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGTTTTGT	NA	False	NA	8	True	AATAAA	-21	NA	124032387	124090568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_124032680_124049131_124049225_124077246_124077373_124090412
transcript_130807.nnic	chr7	+	480	4	NNC	ENSG00000242593.7	novel	1613	11	NA	NA	-61	-221760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.69967317119759	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGTTTTGT	76	False	NA	8	True	AATAAA	-21	NA	124032551	124090568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_124032680_124049131_124049225_124077246_124077373_124090435
transcript_130809.nnic	chr7	+	377	3	NNC	ENSG00000242593.7	novel	640	4	NA	NA	-61	-221760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGTTTTGT	76	False	NA	8	True	AATAAA	-21	NA	124032551	124090568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_124032680_124049131_124049225_124090412
transcript_130816.nnic	chr7	+	700	2	Antisense	novelGene_ENSG00000279419.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCTCTAGTTGAA	NA	False	NA	31	True	TATAAA	-27	NA	124729449	124746896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_124729703_124746449
transcript_130818.nnic	chr7	+	1265	2	Antisense	novelGene_ENSG00000279419.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAGAACAGTTTTCC	NA	False	NA	NA	False	AATAAA	-10	NA	124729449	124747461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_124729703_124746449
transcript_130823.known	chr7	-	2780	19	FSM	ENSG00000128513.16	ENST00000609106.5	2780	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	19.8354340624158	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGTATGGGATTAGAAAAT	161	False	NA	60	True	NA	NA	NA	124929802	124823855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124824075_124825251_124825358_124827200_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929457
transcript_130824.known	chr7	-	3924	19	FSM	ENSG00000128513.16	ENST00000357628.8	3924	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_18	11.3382342344633	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTGGTTTATTGTGG	12	True	NA	-4	True	AATAAA	-18	NA	124929825	124822385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_13083.nic	chr1	+	1180	9	NIC	ENSG00000058673.17	novel	3451	20	NA	NA	-76	280	combination_of_known_junctions	FALSE	canonical	3	178	junction_1	157.206870078887	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGGAAAAATCTAAGAAG	21	False	NA	28	True	AATAAA	-30	NA	203795546	203830176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_203795795_203801574_203801629_203802956_203803017_203816925_203817125_203818569_203818690_203828298_203828423_203829450_203829655_203829779_203829897_203830122
transcript_130830.known	chr7	-	3950	18	FSM	ENSG00000128513.16	ENST00000393329.5	3950	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	15.2204106269831	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTGGTTTATTGTG	-20	True	NA	-5	True	AATAAA	-17	NA	124929983	124822386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_130834.known	chr7	-	2634	18	FSM	ENSG00000128513.16	ENST00000653892.1	2634	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	21.6571268147119	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTACAACTTACAACTAA	-4	True	NA	34	True	NA	NA	NA	124929841	124823468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124859045_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929793
transcript_130835.known	chr7	-	2877	19	FSM	ENSG00000128513.16	ENST00000668382.1	2877	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_18	13.9262829938463	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTAATAAAAGTGGTCAG	19	True	NA	30	True	NA	NA	NA	124929944	124823548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929793
transcript_130838.nic	chr7	+	742	7	FSM	ENSG00000224897.9	ENST00000688362.1	689	7	-59	6	-21	0	multi-exon	FALSE	canonical	0	0	junction_4	4.56131072780134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTACTCAGTCTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	124929851	125102050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_124930017_124940279_124940386_125020332_125020414_125080711_125080814_125089689_125089777_125099403_125099514_125101959
transcript_130841.nnic	chr7	+	655	6	NIC	ENSG00000224897.9	novel	689	7	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	4.44522215417857	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTACTCAGTCTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	124929851	125102050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_124930017_124940279_124940386_125020332_125020414_125080711_125080814_125099403_125099514_125101959
transcript_130842.known	chr7	+	881	6	FSM	ENSG00000224897.9	ENST00000657213.1	881	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.2614551505325	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGTTGTGTCCTGTGA	-20	True	NA	NA	False	AATAAA	-35	NA	124929893	125143045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_124930017_124940279_124940386_125020332_125020414_125125824_125125978_125138572_125138660_125142714
transcript_130843.nnic	chr7	+	553	5	FSM	ENSG00000224897.9	ENST00000688691.1	541	5	-21	9	-21	0	multi-exon	FALSE	canonical	0	0	junction_3	4.96865172858795	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTACTCAGTCTCAG	NA	False	NA	NA	False	AATAAA	-12	NA	124929851	125102050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_124930017_124940279_124940386_125020332_125020414_125099403_125099514_125101959
transcript_130846.nnic	chr7	+	638	3	NNC	ENSG00000224897.9	novel	667	3	NA	NA	-21	-13878	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCAGGGGT	NA	False	NA	NA	False	AATAGA	-18	NA	124929851	124978411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_124930017_124940279_124940386_124978044
transcript_130847.known	chr7	+	667	3	FSM	ENSG00000224897.9	ENST00000659682.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGGTTTCCATGAACT	9	False	NA	NA	False	AATAAA	-39	NA	124929882	124992289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_124930017_124940279_124940386_124991862
transcript_13085.known	chr1	+	944	3	FSM	ENSG00000058673.17	ENST00000466470.5	944	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	19	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTAAACACTCCCTGAT	26	False	NA	NA	False	NA	NA	NA	203795653	203802173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203795795_203796292_203796497_203801574
transcript_130851.nnic	chr7	-	1482	3	NNC	ENSG00000224899.1	novel	600	2	NA	NA	-109199	162	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	3.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTTTAACTTATGATTC	NA	False	NA	NA	False	AATAAA	-18	NA	125262810	125151163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_125151777_125153462_125153613_125262091
transcript_130853.nnic	chr7	-	908	3	NNC	ENSG00000224899.1	novel	600	2	NA	NA	-109069	-282	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATCCCAGGAACTATTT	NA	False	NA	-2	True	AATAAA	-20	NA	125262680	125151607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_125151777_125153462_125153613_125262091
transcript_130856.known	chr7	-	375	1	FSM	ENSG00000213291.3	ENST00000455434.1	375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCTGATCGTCAAATACAT	24	False	NA	NA	False	NA	NA	NA	125300878	125300503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_125300500_125300900
transcript_130867.nnic	chr7	+	1080	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	-8	-4708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	16.739839372653	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTACCATTAACTGTCAA	-1	True	NA	NA	False	AATAAA	-22	NA	125917862	125929124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_125918119_125923681_125923951_125924211_125924388_125928745
transcript_130869.nnic	chr7	+	1175	4	NNC	ENSG00000197462.3	novel	837	5	NA	NA	-8	-4708	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.7451088722749	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTACCATTAACTGTCAA	-1	True	NA	NA	False	AATAAA	-22	NA	125917862	125929124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_125918119_125923681_125924046_125924211_125924388_125928745
transcript_13087.known	chr1	+	822	2	FSM	ENSG00000058673.17	ENST00000461980.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTATTTTGTGGGCTGG	32	False	NA	NA	False	NA	NA	NA	203795659	203802261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203795795_203801574
transcript_130879.nnic	chr7	+	974	3	NIC	ENSG00000197462.3	novel	837	5	NA	NA	-43	448	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	22	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGAAGAGAGGGAGAATT	NA	False	NA	5	True	AATAAA	-25	NA	125917827	125934280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_125918119_125924211_125924388_125933773
transcript_130881.nnic	chr7	+	669	3	NNC	ENSG00000197462.3	novel	837	5	NA	NA	-43	74229	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_2	35	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGTTAAGTGTATATT	NA	False	NA	5	True	AATATA	-21	NA	125917827	126008061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_125918119_125924211_125924388_126007859
transcript_130889.nnic	chr7	+	926	2	NIC	ENSG00000197462.3	novel	837	5	NA	NA	-43	-8986	combination_of_known_splicesites	FALSE	canonical	3	78	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGATAAAAAGAAAAGCCAAA	NA	False	NA	NA	False	ATTAAA	-12	NA	125917827	125924846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_125918119_125924211
transcript_130892.known	chr7	-	3850	11	FSM	ENSG00000179603.18	ENST00000358373.7	3850	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.49666295470958	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTGCAAATGTTGAG	593	False	NA	-17	True	AATAAA	-3	NA	127252381	126438614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_126439169_126446070_126446373_126532951_126533888_126609361_126609499_126769864_126770066_126902541_126902680_126903971_126904127_126904547_126904684_127106495_127106713_127242694_127243516_127252128
transcript_130893.known	chr7	-	4128	2	FSM	ENSG00000179562.3	ENST00000321407.3	4128	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGTTCCTTAATAG	-1	True	NA	-1	True	ATTAAA	-15	NA	127585596	127580627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_127583310_127584150
transcript_130894.known	chr7	+	1032	6	FSM	ENSG00000004059.11	ENST00000000233.10	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_4	126.173531297178	4307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTGTTGTCTGTAGCCT	6	True	NA	27	True	AATAAA	-17	NA	127588410	127591700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962_127591089_127591212
transcript_130895.known	chr7	+	566	5	FSM	ENSG00000004059.11	ENST00000489673.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_4	140.268492541982	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCCTGCCTCTTGAGGG	8	True	NA	NA	False	NA	NA	NA	127588412	127591112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962
transcript_130899.known	chr7	+	3448	24	FSM	ENSG00000197157.11	ENST00000354725.8	3448	24	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_16	149.752322299277	2421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTATTGATCACAGTGT	-3	True	NA	31	True	AATAAA	-20	NA	127652193	128092593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_127652452_127686612_127686763_127694827_127694949_127698874_127698954_127701162_127701324_127702434_127702527_127703164_127703324_127704838_127704946_127707556_127707648_127721286_127721401_127807483_127807574_127844323_127844425_127887901_127888013_127904746_127904820_127929187_127929330_127990946_127991057_128074501_128074691_128081359_128081502_128084723_128084848_128085710_128085781_128086937_128087052_128089488_128089693_128091836_128091882_128091992
transcript_130909.known	chr7	-	15507	19	FSM	ENSG00000106344.8	ENST00000223073.6	15507	19	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_10	26.6468097365482	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGCAGCATGATTTA	-38	True	NA	NA	False	AATAAA	-18	NA	128343908	128297684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128310932_128313174_128313275_128314763_128315021_128317658_128317734_128317956_128318107_128321265_128321425_128323526_128323592_128324558_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128335680_128335846_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_130920.known	chr7	-	728	6	FSM	ENSG00000106344.8	ENST00000459726.1	728	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	108.020368449659	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGGCATGAACATGAAA	-38	True	NA	NA	False	NA	NA	NA	128343908	128338279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128341117_128341220_128343675
transcript_130923.known	chr7	-	570	2	FSM	ENSG00000106344.8	ENST00000488249.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTTGTTTGGATTTTC	6666	False	NA	NA	False	NA	NA	NA	128337204	128335546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128336043_128337130
transcript_130924.known	chr7	-	2479	15	FSM	ENSG00000106348.18	ENST00000348127.10	2479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	80.5726000421422	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	4	True	NA	-26	True	AATAAA	-3	NA	128409982	128392300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409755
transcript_130925.nic	chr7	-	2345	14	ISM	ENSG00000106348.18	ENST00000348127.10	2479	15	4024	0	-10	0	3prime_fragment	FALSE	canonical	0	0	junction_10	65.7756632032128	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	-7	True	NA	-26	True	AATAAA	-3	NA	128405958	128392300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766
transcript_130927.known	chr7	-	1888	14	FSM	ENSG00000106348.18	ENST00000470772.5	1888	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	65.7756632032128	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTTCTTGCTGCAGCCT	9	True	NA	NA	False	NA	NA	NA	128405942	128392738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400537_128400816_128400892_128401014_128401117_128403705_128403755_128405766
transcript_130928.known	chr7	-	2283	13	FSM	ENSG00000106348.18	ENST00000496200.5	2283	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	66.3749869219489	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGTATGCCCTGT	3	True	NA	-3	True	AATAAA	-26	NA	128405948	128392277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128401014_128401117_128403705_128403755_128405766
transcript_130932.known	chr7	+	5743	8	FSM	ENSG00000165055.16	ENST00000480046.5	5743	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	122.772063564301	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	-25	True	NA	5	True	AATAAA	-18	NA	128476753	128506602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_130936.known	chr7	+	1364	2	FSM	ENSG00000135245.10	ENST00000257696.5	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	0	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	12	True	NA	46	True	AATAAA	-19	NA	128455877	128458418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128456024_128457200
transcript_130938.known	chr7	+	785	2	FSM	ENSG00000135245.10	ENST00000435296.2	785	2	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGCCTGTTTAATGCA	-17	True	NA	NA	False	AAAAAG	-5	NA	128455848	128457924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128455910_128457200
transcript_130940.known	chr7	+	904	2	FSM	ENSG00000135245.10	ENST00000466473.1	904	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTGTGTCATGTTGAC	413	False	NA	43	True	AATAAA	-16	NA	128456358	128458415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128456701_128457853
transcript_130941.known	chr7	+	1590	8	FSM	ENSG00000165055.16	ENST00000482555.5	1590	8	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_5	105.146739058774	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTCGTTGATGCTGG	NA	False	NA	0	True	AATAAA	-12	NA	128476728	128502126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_130944.known	chr7	-	448	1	FSM	ENSG00000213280.2	ENST00000393266.2	448	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	540	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGAGGATTCTTTTG	26	False	NA	NA	False	NA	NA	NA	128570688	128570240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128570200_128570700
transcript_130945.known	chr7	+	1114	1	FSM	ENSG00000271553.1	ENST00000605836.1	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGGTCATGCTGATGTT	5917	False	NA	NA	False	AATAAA	-28	NA	128667042	128668156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128667000_128668200
transcript_130956.known	chr7	+	1574	8	FSM	ENSG00000135248.16	ENST00000485070.5	1574	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	8.64728340024089	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAATGTTTTCT	-3	True	NA	NA	False	AGTAAA	-10	NA	128709060	128731611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128709208_128713922_128714133_128716812_128716998_128718891_128719084_128723196_128723319_128726833_128726872_128729901_128730070_128731099
transcript_130976.nnic	chr7	+	577	4	NNC	ENSG00000135248.16	novel	873	5	NA	NA	-2326	-4884	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.8977121983832	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCCTTTGTGTGTAA	NA	False	NA	12	True	AATACA	-15	NA	128706734	128714198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_128706849_128706943_128707008_128709084_128709208_128713922
transcript_130979.nic	chr7	+	474	2	ISM	ENSG00000135248.16	ENST00000493738.5	873	5	-80	9228	-51	-4884	5prime_fragment	FALSE	canonical	3	27	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCCTTTGTGTGTAA	NA	False	NA	12	True	AATACA	-15	NA	128709009	128714198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_128709208_128713922
transcript_130980.known	chr7	+	2572	8	FSM	ENSG00000128595.17	ENST00000479257.5	2572	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	961.909856186416	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAAAGGAAAAATACA	1	True	NA	NA	False	NA	NA	NA	128739403	128769936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_130981.known	chr7	+	4225	8	FSM	ENSG00000128595.17	ENST00000542996.6	4225	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	1040.30335057833	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGTATGTATGACCTTCA	NA	False	NA	17	True	AATAAA	-18	NA	128739291	128771477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128739433_128747552_128748368_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_130987.known	chr7	+	5266	7	FSM	ENSG00000128595.17	ENST00000249364.9	5266	7	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_2	292.981607310463	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTTTGGAGCAACT	-6	True	NA	21	True	AATAAA	-14	NA	128739358	128773400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_130988.known	chr7	+	2438	7	FSM	ENSG00000128595.17	ENST00000449187.6	2438	7	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_3	870.227556447163	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	-2	True	NA	NA	False	NA	NA	NA	128739362	128770576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128739433_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_130998.known	chr7	+	711	3	FSM	ENSG00000128524.5	ENST00000492758.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.5	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGGGTTGGGTGCTGG	34	False	NA	28	True	ATTAAA	-20	NA	128862903	128865844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128863063_128865119_128865204_128865376
transcript_131002.known	chr7	+	678	2	FSM	ENSG00000128524.5	ENST00000249289.5	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1767	junction_1	0	16603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTGGGTGCTGGAAA	-14	True	NA	31	True	ATTAAA	-23	NA	128862855	128865847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128863063_128865376
transcript_131006.known	chr7	-	3585	24	FSM	ENSG00000064419.14	ENST00000482320.5	3585	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	8.07010867735201	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	70	False	NA	NA	False	AGTAAA	-17	NA	129055093	128955087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129041556_129041718_129054650
transcript_131008.known	chr7	-	4345	23	FSM	ENSG00000064419.14	ENST00000265388.10	4345	23	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_20	4.49149793710386	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCTTTGTTTTTA	10	True	NA	-6	True	AATAAA	-15	NA	129055111	128954184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_131009.known	chr7	-	3283	22	FSM	ENSG00000064419.14	ENST00000471234.5	3283	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	6.70397722681069	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	19	False	129055163	NA	False	AGTAAA	-17	NA	129055144	128955087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_131010.known	chr7	+	2017	1	FSM	ENSG00000230359.5	ENST00000635637.1	2017	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAAATAGTAAT	-4	True	NA	NA	False	AATAAA	-39	NA	129055222	129057239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129055200_129057200
transcript_131011.nic	chr7	+	1223	2	ISM	ENSG00000158457.6	ENST00000614309.1	1687	3	956	0	-816	0	3prime_fragment	TRUE	canonical	3	410	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACGCGGGACTCCATGAA	NA	False	NA	23	True	AATAAA	-16	NA	129167395	129168830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_129167561_129167772
transcript_131012.known	chr7	+	3977	12	FSM	ENSG00000128602.11	ENST00000249373.8	3977	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	14.6930016511488	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTGTGTTTTTCCTT	-2	True	NA	15	True	AATAAA	-16	NA	129188632	129213545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129189483_129203383_129203590_129205202_129205413_129205609_129205783_129206149_129206370_129206463_129206588_129208758_129208852_129209288_129209398_129210362_129210549_129210964_129211114_129211635_129211771_129212023
transcript_131014.known	chr7	+	2866	20	FSM	ENSG00000128578.10	ENST00000435494.2	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	6.03728030346479	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCGAGTTGTCCCAAAAT	0	True	NA	3	True	AATAAA	-15	NA	129434445	129483631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841
transcript_131016.known	chr7	+	5116	21	FSM	ENSG00000128578.10	ENST00000249344.7	5116	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	6.71490878567982	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGTTTAAATTCTTCA	-14	True	NA	NA	False	AATAAA	-25	NA	129434431	129488399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129434602_129440021_129440092_129444023_129444099_129451612_129451748_129453226_129453348_129454141_129454211_129454420_129454528_129455243_129455372_129456438_129456643_129458214_129458451_129458711_129458778_129459516_129459581_129460300_129460373_129462965_129463041_129464043_129464142_129464611_129464739_129467349_129467451_129470648_129470716_129480784_129480890_129482841_129483047_129485578
transcript_131018.known	chr7	+	3518	11	FSM	ENSG00000106459.15	ENST00000393232.6	3518	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	18.4325798519903	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTGGAATTGTTCAT	-6	True	NA	9	True	AATAAA	-19	NA	129611719	129757076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129611825_129657345_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_131021.known	chr7	+	2424	11	FSM	ENSG00000106459.15	ENST00000223190.8	2424	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	13.2230858728211	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAATTGCTCGTATAT	30	True	NA	16	True	ATTAAA	-24	NA	129611755	129756015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129611825_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_131029.known	chr7	-	1741	10	FSM	ENSG00000091732.17	ENST00000481503.5	1741	10	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_4	306.463700950047	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTGTGTATTAATAA	-11	True	NA	-47	True	NA	NA	NA	130051389	130018325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024378_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_131031.known	chr7	-	1889	10	FSM	ENSG00000091732.17	ENST00000358303.9	1889	10	0	0	0	0	multi-exon	FALSE	canonical	1	253	junction_8	199.077874210069	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	4	True	NA	-13	True	AATAAA	-14	NA	130051374	130018291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_131036.nic	chr7	-	1642	8	NIC	ENSG00000091732.17	novel	1889	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	286.934537083685	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-12	True	NA	-13	True	AATAAA	-14	NA	130051390	130018291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130051220
transcript_131039.nic	chr7	-	1180	2	ISM	ENSG00000091732.17	ENST00000484432.1	559	4	-24	8635	-20	-8635	5prime_fragment	FALSE	canonical	3	918	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAACTAGGAA	NA	False	NA	NA	False	NA	NA	NA	130051409	130048153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_130049145_130051220
transcript_13104.known	chr1	+	478	4	FSM	ENSG00000182004.13	ENST00000470492.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3434.35868184375	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTACATTGCTTC	15	True	NA	21	True	AATAAA	-21	NA	203861608	203870077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203861744_203863662_203863726_203865040_203865120_203869876
transcript_131041.known	chr7	+	6398	10	FSM	ENSG00000128607.14	ENST00000335420.10	6398	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.56925310429282	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTCAAGTTCACCTTG	-23	True	NA	28	True	AATAAA	-16	NA	130070533	130135705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130070810_130096920_130097008_130116444_130116667_130120748_130120904_130122053_130122203_130124450_130124536_130125864_130125932_130127403_130127452_130129436_130129577_130130536
transcript_131045.nnic	chr7	+	406	3	NNC	ENSG00000128607.14	novel	370	2	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGAGACCTTTTCTCTA	-12	True	NA	NA	False	NA	NA	NA	130070544	130117666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_130070714_130116577_130116667_130117518
transcript_131047.known	chr7	+	427	2	FSM	ENSG00000229196.4	ENST00000469264.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGCAAGGTGAAGAGACT	NA	False	NA	NA	False	NA	NA	NA	130141730	130142539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130141773_130142154
transcript_131049.known	chr7	-	3455	15	FSM	ENSG00000146842.17	ENST00000397622.7	3455	15	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_14	37.3111571648427	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAATGTCTTTTTT	12	True	NA	-7	True	ATTAAA	-31	NA	130205406	130164712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130178401_130178528_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_131050.known	chr7	-	1961	14	FSM	ENSG00000146842.17	ENST00000473456.5	1961	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	84.1547602256643	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCAGTCTTTTTTTT	15	True	NA	NA	False	NA	NA	NA	130205403	130166077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_131055.known	chr7	-	2612	12	FSM	ENSG00000106477.20	ENST00000676115.1	2612	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.515136468956	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGGTAAGATTTGCCTTA	12	True	NA	NA	False	NA	NA	NA	130441010	130397575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130426628_130426760_130427954_130428019_130440933
transcript_131056.known	chr7	-	1272	11	FSM	ENSG00000106477.20	ENST00000675935.1	1272	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	25.759658382828	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	-1	True	NA	-9	True	AATAAA	-21	NA	130441078	130398843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402791_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_131058.known	chr7	-	2465	11	FSM	ENSG00000106477.20	ENST00000674630.1	2465	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	24.6746833819605	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTTCTCGCCACCAA	-24	True	NA	-147	True	NA	NA	NA	130441046	130397551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404639_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_131060.known	chr7	-	2589	10	FSM	ENSG00000106477.20	ENST00000675596.1	2589	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.0631033085738	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGTATGAGAAATAA	NA	False	NA	-74	True	NA	NA	NA	130441237	130397478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_131066.known	chr7	-	3161	3	FSM	ENSG00000106477.20	ENST00000489512.5	3161	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	46.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATGAAGTGTAGACA	85	False	130441077	NA	False	AATAAA	-39	NA	130441056	130419033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130422008_130427954_130428019_130440933
transcript_131068.known	chr7	-	1012	10	FSM	ENSG00000106477.20	ENST00000343969.10	1012	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.406406388126	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	6	True	NA	-9	True	AATAAA	-21	NA	130441016	130398843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_131069.known	chr7	-	3134	24	FSM	ENSG00000158623.14	ENST00000425248.5	3134	24	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_13	20.9637368059601	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATACTTGAAGTTGC	-14	True	NA	-13	True	AATAAA	-20	NA	130668748	130506237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130506807_130507273_130507373_130507684_130507824_130508561_130508660_130547673_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_131074.nnic	chr7	-	900	10	NNC	ENSG00000158623.14	novel	3134	24	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	56.9795284875776	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATACTTGAAGTTGC	NA	False	NA	-13	True	AATAAA	-20	NA	130668765	130506237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_130506304_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_131078.nnic	chr7	-	2278	6	NNC	ENSG00000213265.9	novel	1633	8	NA	NA	17780	27794	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	70.474392512458	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTCTCTCTTCAAGC	NA	False	NA	NA	False	AATAAA	-25	NA	130668765	130640848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_130642707_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_131079.nnic	chr7	-	881	6	NNC	ENSG00000213265.9	novel	1633	8	NA	NA	17780	26397	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	70.474392512458	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTAGTTAGTGTCTTA	NA	False	NA	NA	False	TATAAA	-24	NA	130668765	130642245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_130642707_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_131080.nnic	chr7	-	1272	6	NNC	ENSG00000213265.9	novel	1633	8	NA	NA	17780	23017	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	71.6614261649878	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTTTCTTCAGTTAAT	NA	False	NA	NA	False	NA	NA	NA	130668765	130645625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_130646478_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_131084.known	chr7	-	3073	20	FSM	ENSG00000158623.14	ENST00000330992.8	3073	20	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	22.0378671841832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCCCTGGTCATCAT	29	False	NA	NA	False	AATAAA	-20	NA	130668705	130546786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_131088.known	chr7	+	2443	12	FSM	ENSG00000106484.16	ENST00000341441.9	2443	12	0	0	0	0	multi-exon	TRUE	canonical	3	1434	junction_1	187.312131776732	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486170	130506292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_13109.known	chr1	+	1560	5	FSM	ENSG00000182004.13	ENST00000414487.7	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	6006	junction_1	598.494935233374	47060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGTTTGAAATTAAT	5	True	NA	4	True	AATAAA	-22	NA	203861598	203871152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203861714_203862195_203862223_203863662_203863726_203865040_203865120_203869876
transcript_131094.nic	chr7	+	2405	12	NIC	ENSG00000106484.16	novel	2443	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	239	junction_1	494.386722520901	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	-10	True	NA	16	True	AATAAA	-18	NA	130486332	130506292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_131096.known	chr7	+	2646	12	FSM	ENSG00000106484.16	ENST00000223215.10	2646	12	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	409.739667400317	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	-2	True	NA	NA	False	NA	NA	NA	130492084	130506465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130492340_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_131098.known	chr7	+	2337	11	FSM	ENSG00000106484.16	ENST00000416162.7	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_8	521.849748490885	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486174	130506292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_13110.known	chr1	+	532	5	FSM	ENSG00000182004.13	ENST00000475035.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	2992.05660875592	4730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	9	True	NA	28	True	AATAAA	-28	NA	203861602	203870084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203861744_203862181_203862223_203863662_203863726_203865040_203865120_203869876
transcript_131100.known	chr7	+	2473	11	FSM	ENSG00000106484.16	ENST00000427521.6	2473	11	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	682.74754485095	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	-7	True	NA	NA	False	NA	NA	NA	130486335	130506465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_13111.known	chr1	+	967	4	FSM	ENSG00000182004.13	ENST00000483099.5	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	6601	junction_1	458.779055997789	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACATTGCTTCTTAC	9	True	NA	25	True	AATAAA	-25	NA	203861602	203870081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203862223_203863662_203863726_203865040_203865120_203869876
transcript_131115.known	chr7	-	900	2	FSM	ENSG00000231721.7	ENST00000429901.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAGCATTCTCCTTAG	2129	False	NA	NA	False	NA	NA	NA	131107928	131051864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131052556_131107719
transcript_131117.known	chr7	+	2448	18	FSM	ENSG00000128585.18	ENST00000458153.5	2448	18	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_5	89.5499319453605	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	13	True	NA	13	True	AATAAA	-25	NA	131327896	131487962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399237_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487606
transcript_13112.known	chr1	+	248	3	FSM	ENSG00000182004.13	ENST00000469451.1	248	3	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	3108.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATAGAAGTGGTCTT	8	True	NA	NA	False	AAGAAA	-9	NA	203861849	203865119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203861956_203863662_203863726_203865040
transcript_131121.known	chr7	+	2386	17	FSM	ENSG00000128585.18	ENST00000494785.5	2386	17	0	0	0	0	multi-exon	FALSE	canonical	2	219	junction_9	45.5435488708335	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAATGCAGGCTGTTTT	-1	True	NA	NA	False	AATAAA	-20	NA	131327882	131478960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622
transcript_13113.known	chr1	+	355	3	FSM	ENSG00000182004.13	ENST00000367208.1	355	3	0	0	0	0	multi-exon	FALSE	canonical	3	6845	junction_1	414	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATACTATGGGATTGT	1483	False	NA	-5	True	NA	NA	NA	203863624	203870051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203863726_203865040_203865120_203869876
transcript_131136.nic	chr7	+	1104	2	ISM	ENSG00000128585.18	ENST00000494785.5	2386	17	-52	102600	-15	-22937	5prime_fragment	FALSE	canonical	3	405	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGCGCGGTGGCTCA	399	False	NA	NA	False	NA	NA	NA	131327830	131376360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_131327998_131375423
transcript_131138.known	chr7	+	406	1	FSM	ENSG00000233287.1	ENST00000427253.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGATGCTTCGTTTTG	33	False	NA	NA	False	NA	NA	NA	131242589	131242995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_131242600_131243000
transcript_131139.known	chr7	-	2043	6	FSM	ENSG00000236753.7	ENST00000429067.5	2043	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	9.93981891183134	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23	True	NA	NA	False	NA	NA	NA	131327776	131309743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131310774_131311129_131311224_131323364_131323869_131324302_131324426_131326805_131326936_131327614
transcript_13114.nnic	chr1	+	1265	3	NNC	ENSG00000286383.1	novel	776	3	NA	NA	230	573	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCATTCATTTATGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	203996761	204008930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_203996843_204005581_204005703_204007867
transcript_131140.known	chr7	-	1349	4	FSM	ENSG00000236753.7	ENST00000416220.6	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	8.16496580927726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	29	True	NA	NA	False	TTTAAA	-41	NA	131327724	131322842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131323869_131324302_131324426_131326805_131326896_131327614
transcript_131141.nic	chr7	-	1903	4	ISM	ENSG00000236753.7	ENST00000670684.1	1900	7	-34	12475	-18	243	5prime_fragment	FALSE	canonical	3	18	junction_2	4.18993502999218	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTCTCAGGTAGTTCTT	-44	True	NA	NA	False	ATTAAA	-21	NA	131327797	131322401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_131323869_131324302_131324426_131326805_131326936_131327614
transcript_131142.known	chr7	-	1497	4	FSM	ENSG00000236753.7	ENST00000444245.6	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCCGTCTCTACTAAAA	7	True	NA	NA	False	NA	NA	NA	131327746	131322767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131323869_131324251_131324426_131326805_131326896_131327614
transcript_131143.known	chr7	-	1510	4	FSM	ENSG00000236753.7	ENST00000454515.6	1510	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	6.54896090146283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCGTCTCTACTAAAAAT	36	True	NA	NA	False	NA	NA	NA	131327717	131322765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131323869_131324251_131324426_131326805_131326936_131327614
transcript_131151.known	chr7	-	1918	3	FSM	ENSG00000236753.7	ENST00000663485.1	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTGGCTAACAAGGTGA	-10	True	NA	NA	False	NA	NA	NA	131327763	131322786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131324426_131326805_131326936_131327614
transcript_131152.known	chr7	-	1440	4	FSM	ENSG00000236753.7	ENST00000669897.1	1440	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5303793326209	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGAGACCATCCTGGCT	26	True	NA	NA	False	NA	NA	NA	131327727	131322796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131323869_131324300_131324426_131326805_131326936_131327614
transcript_131153.known	chr7	-	5986	9	FSM	ENSG00000128567.17	ENST00000378555.8	5986	9	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_6	814.95980537386	2074	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCAAGCTCTAGTAGT	-8	True	NA	-17	True	ATTAAA	-16	NA	131556628	131500270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131504509_131505867_131506036_131506259_131506322_131506578_131506727_131508950_131509029_131509364_131509586_131510235_131510332_131510827_131511434_131556259
transcript_13116.known	chr1	-	776	5	FSM	ENSG00000174567.8	ENST00000308302.4	776	5	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	9.62743475698485	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-5	True	NA	-6	True	ATTAAA	-20	NA	204213988	204198162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_204198497_204199194_204199259_204201632_204201812_204202895_204202988_204213881
transcript_131160.known	chr7	-	673	1	FSM	ENSG00000213261.3	ENST00000445713.1	673	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	449	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAAAATCCATCCTGGA	NA	False	NA	NA	False	NA	NA	NA	131662624	131661951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131662000_131662600
transcript_131162.nnic	chr7	-	840	2	Antisense	novelGene_ENSG00000224865.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTTTTGTTAAATCTT	NA	False	NA	NA	False	AATAAA	-13	NA	131910695	131908379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_131908966_131910441
transcript_131170.known	chr7	-	1604	8	FSM	ENSG00000106554.13	ENST00000262570.10	1604	8	0	0	0	0	multi-exon	FALSE	canonical	3	1144	junction_6	49.9371032971906	6701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCATTGTAGCTCCTC	-5	True	NA	-20	True	AATAAA	-17	NA	133082090	132784869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_131171.known	chr7	-	1038	9	FSM	ENSG00000106554.13	ENST00000448878.6	1038	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	524.628380379865	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTAAAAGAGAAGGGCA	53	False	NA	NA	False	ATTAAA	-34	NA	133082032	132785392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132886973_132886989_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_131174.known	chr7	-	1314	1	FSM	ENSG00000283041.1	ENST00000634247.1	1314	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	505	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTCTTGCCATCACCTA	13	False	NA	NA	False	NA	NA	NA	133035920	133034606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_133034600_133035900
transcript_131175.known	chr7	-	1099	1	FSM	ENSG00000237821.1	ENST00000421179.1	1099	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTAATGCCCTTCTGATA	85	False	NA	NA	False	AGTAAA	-23	NA	133170514	133169415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_133169400_133170500
transcript_131176.known	chr7	+	4182	18	FSM	ENSG00000131558.15	ENST00000253861.5	4182	18	0	0	0	0	multi-exon	TRUE	canonical	3	316	junction_10	29.4056464224559	2427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGTTATTTTTCTT	-7	True	NA	20	True	ATTAAA	-22	NA	133253077	134065761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049_133480139_133630044_133630142_133817324_133817545_133895598_133895736_133917582_133917739_133937890_133938070_133997491_133997634_134004911_134005091_134007675_134007836_134064290
transcript_131180.known	chr7	+	2364	9	FSM	ENSG00000131558.15	ENST00000462055.5	2364	9	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_7	32.7220777916073	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTGGTGAGGGCCTGC	10	True	NA	NA	False	AAAAAG	-22	NA	133253094	133481078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049
transcript_131183.nic	chr7	+	692	4	ISM	ENSG00000131558.15	ENST00000462055.5	2364	9	-40	175028	-18	139	5prime_fragment	FALSE	canonical	3	354	junction_3	33.6551135292494	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAATCAGGTTAAAGAG	NA	False	NA	NA	False	NA	NA	NA	133253054	133306050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876
transcript_131184.known	chr7	+	568	2	FSM	ENSG00000131558.15	ENST00000481074.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAACTCGTTTATTT	14	True	NA	25	True	AATAAA	-37	NA	133253098	133254018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_133253188_133253539
transcript_131185.known	chr7	+	1604	10	FSM	ENSG00000131558.15	ENST00000393161.6	1604	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	125.359926256803	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTTCTTTGGTGTTAT	-12	True	NA	NA	False	ATTAAA	-5	NA	133253072	133484197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049_133480139_133484039
transcript_13119.nic	chr1	-	1627	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-153	0	intron_retention	FALSE	canonical	3	54	junction_1	4.49691252107735	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	NA	False	NA	-6	True	ATTAAA	-20	NA	204214141	204198162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_204199259_204201632_204201812_204202895_204202988_204213881
transcript_131190.nic	chr7	+	1304	5	ISM	ENSG00000155530.3	ENST00000645682.1	3462	16	44	61328	-15	7230	5prime_fragment	TRUE	canonical	2	7	junction_3	5.49431524395898	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTCCTTTCTTCAAATT	-9	True	NA	NA	False	NA	NA	NA	134127342	134148928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134127665_134137022_134137131_134139435_134139518_134143061_134143163_134148237
transcript_131191.nic	chr7	+	1496	5	ISM	ENSG00000155530.3	ENST00000645682.1	3462	16	44	61136	-15	7422	5prime_fragment	FALSE	canonical	2	7	junction_3	5.49431524395898	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTTTTGATTTGATT	-9	True	NA	NA	False	TTTAAA	-29	NA	134127342	134149120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134127665_134137022_134137131_134139435_134139518_134143061_134143163_134148237
transcript_131192.known	chr7	+	583	4	FSM	ENSG00000155530.3	ENST00000473068.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.56846672960488	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGTGAAGTTAGTAGAGTT	6	True	NA	NA	False	NA	NA	NA	134127357	134141698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134127665_134137022_134137131_134139435_134139518_134141612
transcript_131199.known	chr7	-	6676	10	FSM	ENSG00000205060.11	ENST00000378509.9	6676	10	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	27.7306266485449	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTTTTGCCATTATT	29	True	NA	0	True	AATAAA	-19	NA	134316930	134289331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_13120.nnic	chr1	-	863	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-153	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	28.8598144292178	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAGGCTCAGAGTTGG	NA	False	NA	-8	True	ATTAAA	-18	NA	204214141	204198164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_204198497_204201632_204201812_204202895_204202988_204213881
transcript_131203.known	chr7	-	1379	9	FSM	ENSG00000205060.11	ENST00000416907.5	1379	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	108.382424774499	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGAATTCTGAGTCTC	-26	True	NA	39	True	NA	NA	NA	134316903	134294551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134306671_134306775_134309365_134309480_134316674
transcript_131211.known	chr7	-	1033	8	FSM	ENSG00000205060.11	ENST00000470969.2	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	29.8226047672238	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCATTTTGCTTTGGA	-20	True	NA	NA	False	AGTAAA	-14	NA	134316897	134299308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_131212.known	chr7	-	1855	2	FSM	ENSG00000273297.3	ENST00000609619.2	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGGAGTCTTCTTCTA	NA	False	NA	NA	False	ATTAAA	-19	NA	134432485	134417291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134418975_134432313
transcript_131221.known	chr7	-	1361	10	FSM	ENSG00000085662.14	ENST00000285930.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	1396	junction_6	137.646084014201	11931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTTGTGAGCTTTG	30	True	NA	-32	True	AATAAA	-15	NA	134459100	134442355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447979_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_131222.known	chr7	-	1930	9	FSM	ENSG00000085662.14	ENST00000465351.5	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	1396	junction_5	145.953759800836	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGCCTCAAATAAAAAG	28	True	NA	-63	True	NA	NA	NA	134459102	134442386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_131224.known	chr7	+	1619	10	FSM	ENSG00000198074.10	ENST00000359579.5	1619	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.666666666666667	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTGAGACTGTACTA	-2	True	NA	NA	False	AATAAA	-22	NA	134527566	134541412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134527978_134530642_134530811_134531907_134532025_134533003_134533082_134536649_134536773_134537050_134537158_134537579_134537662_134538193_134538278_134538934_134539018_134541046
transcript_131227.known	chr7	+	1870	4	FSM	ENSG00000172331.12	ENST00000418040.5	1870	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	99.5500990568177	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAAGTGTCTCCGTGT	-9	True	NA	21	True	AATAAA	-32	NA	134646810	134679808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134646938_134647134_134647260_134661446_134662109_134678852
transcript_131229.known	chr7	+	2051	4	FSM	ENSG00000172331.12	ENST00000393132.2	2051	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	101.588494536646	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTGTTTG	11	True	NA	26	True	AATAAA	-37	NA	134646830	134679813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134646938_134658347_134658669_134661446_134662109_134678852
transcript_131231.known	chr7	+	1711	3	FSM	ENSG00000172331.12	ENST00000344924.8	1711	3	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	13.5	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCGTGTGTTTGGTG	-2	True	NA	29	True	AATAAA	-40	NA	134646852	134679816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134646938_134661446_134662109_134678852
transcript_131234.known	chr7	+	2665	15	FSM	ENSG00000122786.20	ENST00000422748.5	2665	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	282.198701525817	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	0	True	NA	85	True	NA	NA	NA	134779419	134968859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958211_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_131237.known	chr7	+	5011	15	FSM	ENSG00000122786.20	ENST00000361675.7	5011	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	268.260648456318	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTTGAGTCTTGGTT	-11	True	NA	13	True	AATAAA	-25	NA	134779633	134970729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134934078_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_131239.known	chr7	+	4114	14	FSM	ENSG00000122786.20	ENST00000361901.6	4114	14	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	173.474074252811	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	9	False	NA	41	True	AATAAA	-21	NA	134779677	134970641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_131245.known	chr7	+	2199	13	FSM	ENSG00000122786.20	ENST00000495522.1	2199	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	291.164651300028	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	15	True	NA	85	True	NA	NA	NA	134891609	134968859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958211_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_131249.known	chr7	+	2124	12	FSM	ENSG00000122786.20	ENST00000424922.5	2124	12	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_1	107.809826443075	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	15	True	NA	85	True	NA	NA	NA	134891609	134968859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_13126.known	chr1	-	386	2	FSM	ENSG00000174567.8	ENST00000475517.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTCCTGTTTACAGCCA	NA	False	NA	NA	False	NA	NA	NA	204201701	204198941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_204199259_204201632
transcript_131262.nic	chr7	+	1023	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-321	29147	-91	0	5prime_fragment	FALSE	canonical	3	299	junction_3	183.13519596189	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	NA	False	NA	37	True	AAAAAG	-16	NA	134779328	134933242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_131263.nic	chr7	+	1027	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-243	29065	-13	82	5prime_fragment	FALSE	canonical	3	299	junction_3	183.13519596189	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAAGGAAAAGGAGGA	NA	False	NA	5	True	AAGAAA	-9	NA	134779406	134933324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_13127.nnic	chr1	-	1561	4	NNC	ENSG00000143850.16	novel	414	5	NA	NA	-9975	3356	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	25.5734237050888	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAATAAAAGTGTGAT	1	True	NA	NA	False	AATAAA	-3	NA	204288364	204270269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_204271375_204273625_204273741_204274728_204274810_204288104
transcript_131272.nic	chr7	+	722	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-256	35617	-46	0	5prime_fragment	FALSE	canonical	3	422	junction_1	171	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	NA	False	NA	37	True	AAAAAG	-16	NA	134891353	134933242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_131273.nic	chr7	+	804	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-256	35535	-46	82	5prime_fragment	FALSE	canonical	3	422	junction_1	171	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAAGGAAAAGGAGGA	NA	False	NA	5	True	AAGAAA	-9	NA	134891353	134933324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_131274.known	chr7	+	903	7	FSM	ENSG00000122786.20	ENST00000466704.1	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	255.092575788129	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGTTAAGGTATTACT	2740	False	NA	101	True	AAAAAG	-4	NA	134950374	134968875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968553
transcript_131275.nnic	chr7	-	674	4	NNC	ENSG00000286458.1	novel	2368	2	NA	NA	-79638	-158855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGTTCACTGGAC	NA	False	NA	NA	False	AATAAA	-20	NA	135077791	134975397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_134975640_134998082_134998152_134999833_135000040_135077634
transcript_131281.known	chr7	+	856	5	FSM	ENSG00000146856.14	ENST00000494702.2	856	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.0779082253011	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTATTGAAATTCT	26	True	NA	-34	True	NA	NA	NA	134986554	134995550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134986702_134987874_134987997_134989249_134989311_134993492_134993679_134995210
transcript_131283.known	chr7	+	2979	5	FSM	ENSG00000146856.14	ENST00000476700.5	2979	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	16.2845785944863	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTTTGGCCCTGTG	19	True	NA	24	True	AATAAA	-14	NA	134986547	135012511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134986702_134987888_134987997_134989249_134989311_134993492_134993679_135010041
transcript_131287.nnic	chr7	+	911	4	NIC	ENSG00000146856.14	novel	2979	5	NA	NA	-22	-1944	combination_of_known_splicesites	TRUE	canonical	3	4	junction_3	17.6131264181639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATCTTGATGGTTGTATT	-43	True	NA	NA	False	AATAAA	-15	NA	134986485	135010567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_134986702_134987888_134987997_134989249_134989311_135010041
transcript_131292.nic	chr7	+	762	3	ISM	ENSG00000146856.14	ENST00000476700.5	2979	5	-62	22824	-22	1323	5prime_fragment	FALSE	canonical	3	38	junction_2	3	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGGACATCTTGA	-43	True	NA	10	True	AATAAA	-21	NA	134986485	134989687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134986702_134987888_134987997_134989249
transcript_131293.nnic	chr7	+	854	3	NIC	ENSG00000146856.14	novel	2979	5	NA	NA	-22	-1940	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	20.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGGTTGTATTATGG	-43	True	NA	NA	False	AATAAA	-19	NA	134986485	135010571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_134986702_134987888_134987997_135010041
transcript_131297.known	chr7	-	1727	4	FSM	ENSG00000122783.17	ENST00000617987.1	1727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.296241115955	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	1945	False	NA	0	True	AATACA	-37	NA	135170524	135165781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170275
transcript_131298.nic	chr7	-	1803	4	NIC	ENSG00000122783.17	novel	1738	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	114.77223822278	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-16	True	NA	-3	True	AATACA	-34	NA	135170722	135165784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_135166872_135167731_135167808_135168744_135169061_135170398
transcript_13130.known	chr1	-	5704	27	FSM	ENSG00000143850.16	ENST00000637508.1	5704	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	25.4138817305697	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATATTATAGATCTATA	-8	True	NA	-59	True	AATATA	-16	NA	204307395	204220755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_204222780_204223461_204223586_204228082_204228229_204228727_204228862_204228936_204229105_204230412_204230587_204241374_204241482_204241684_204241815_204243113_204243264_204244863_204245004_204245614_204245727_204247364_204247461_204248820_204248971_204249183_204249265_204250545_204250615_204251530_204251612_204255625_204255680_204256801_204256889_204257352_204257870_204259257_204259741_204261305_204261449_204264941_204265043_204267474_204267548_204268207_204268313_204273625_204273741_204274728_204274810_204307336
transcript_131303.known	chr7	-	578	2	FSM	ENSG00000122783.17	ENST00000486115.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACCCACTTCTGCCTCT	-16	True	NA	NA	False	GGGGCT	-37	NA	135170511	135168595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135169061_135170398
transcript_131305.known	chr7	-	1579	4	FSM	ENSG00000122783.17	ENST00000430372.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	118.923878547956	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAATACACAAGTGCTA	1674	False	NA	-47	True	AATAAA	-17	NA	135170795	135165828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135166872_135167731_135167808_135168744_135169061_135170651
transcript_131306.known	chr7	-	1494	4	FSM	ENSG00000122783.17	ENST00000393114.8	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	77.761744379154	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-1	True	NA	-3	True	AATACA	-34	NA	135170707	135165784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135166872_135167731_135167808_135168785_135169061_135170651
transcript_131307.known	chr7	-	1738	4	FSM	ENSG00000122783.17	ENST00000424142.5	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	114.77223822278	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	45	True	NA	-3	True	AATACA	-34	NA	135170661	135165784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170398
transcript_131308.nnic	chr7	+	981	2	NNC	ENSG00000287733.1	novel	1053	2	NA	NA	30	5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTTGTCTTGTGGT	NA	False	NA	18	True	TATAAA	-27	NA	135170845	135172419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_135171107_135171699
transcript_131309.known	chr7	-	4580	15	FSM	ENSG00000105875.15	ENST00000354475.5	4580	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	7.94496374941962	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTATCTCTCCTTCCATA	-9	True	NA	-16	True	AATAAA	-16	NA	135211526	135183838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
transcript_13131.known	chr1	-	483	1	FSM	ENSG00000219133.2	ENST00000403842.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	3739	False	NA	NA	False	NA	NA	NA	204347258	204346775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_204346800_204347300
transcript_131313.known	chr7	-	3507	12	FSM	ENSG00000080802.20	ENST00000451834.5	3507	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	41.3988860791573	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	13	True	NA	0	True	AATAAA	-22	NA	135510080	135361794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_131314.known	chr7	-	3297	11	FSM	ENSG00000080802.20	ENST00000423368.6	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	36.9730983283792	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGGTTGTCCTTGTT	16	True	NA	-3	True	AATAAA	-19	NA	135510077	135361797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_131315.known	chr7	-	2215	11	FSM	ENSG00000080802.20	ENST00000361528.8	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	30.8708600463285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAGGAGCAACCATTA	2	True	NA	NA	False	NA	NA	NA	135510091	135362884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_131316.known	chr7	-	3783	11	FSM	ENSG00000080802.20	ENST00000315544.6	3783	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	42.3581161054172	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGTGGAGCTGAGGC	NA	False	NA	89	True	NA	NA	NA	135510127	135387069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_131317.known	chr7	-	4642	11	FSM	ENSG00000080802.20	ENST00000428680.6	4642	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	37.5207942346641	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCCTTGAAATGTTTT	17	True	NA	NA	False	AAAAAG	-3	NA	135510076	135386150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_131321.nic	chr7	-	605	3	ISM	ENSG00000080802.20	ENST00000315544.6	3783	11	-22	35206	-22	0	5prime_fragment	FALSE	canonical	3	118	junction_1	4	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATGAGAGAAAACA	NA	False	NA	NA	False	GATAAA	-17	NA	135510149	135422275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_135422354_135438157_135438424_135509888
transcript_131322.nic	chr7	-	2487	2	ISM	ENSG00000080802.20	ENST00000315544.6	3783	11	-22	49128	-22	-13884	5prime_fragment	FALSE	canonical	3	126	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAGATTTTAAAGG	NA	False	NA	NA	False	AGTAAA	-11	NA	135510149	135436197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_135438424_135509888
transcript_131323.known	chr7	+	6264	43	FSM	ENSG00000155561.15	ENST00000285968.11	6264	43	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	90.7151637252847	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTATGGTTAATCTTT	-6	True	NA	NA	False	AATAAA	-21	NA	135557916	135648753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795_135578025_135578750_135578916_135584831_135585008_135587574_135587692_135587854_135587993_135591449_135591601_135592986_135593193_135594546_135594730_135597367_135597419_135597997_135598208_135600869_135600970_135601369_135601508_135602804_135602995_135604339_135604461_135606144_135606227_135606750_135606916_135607246_135607372_135614158_135614274_135615915_135616066_135616654_135616727_135617089_135617248_135617601_135617683_135618411_135618604_135619422_135619691_135619789_135619889_135622776_135622926_135625163_135625356_135626239_135626362_135627972_135628112_135630343_135630471_135635580_135635658_135637930_135638060_135638556_135638684_135643191_135643359_135644894_135645019_135645467_135645597_135646157_135646232_135648403
transcript_131326.nic	chr7	+	1522	6	ISM	ENSG00000155561.15	ENST00000285968.11	6264	43	-211	70323	-211	4653	5prime_fragment	FALSE	canonical	3	458	junction_1	45.3316666360283	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATGATTTCTATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	135557705	135578430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795
transcript_13133.known	chr1	-	5259	2	FSM	ENSG00000158615.10	ENST00000367188.5	5259	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTTGGTTCAACTT	-3	True	NA	-15	True	AATAAA	-26	NA	204411817	204403380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_204406314_204409491
transcript_131330.known	chr7	+	553	2	FSM	ENSG00000155561.15	ENST00000491089.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAATGTATGGTTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	135646024	135648749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_135646232_135648403
transcript_131331.known	chr7	-	2906	16	FSM	ENSG00000164707.16	ENST00000682651.1	2906	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.41844761962894	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTATCTAGTCTTTGTAA	0	True	NA	NA	False	AATAAA	-39	NA	135728186	135681230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135681701_135684123_135684262_135685521_135685684_135691200_135691326_135691547_135691646_135692322_135692425_135694136_135694239_135695367_135695488_135699363_135699549_135701679_135701761_135702844_135702885_135705595_135705651_135706127_135706301_135708113_135708251_135721394_135721524_135727397
transcript_131335.known	chr7	+	2004	3	FSM	ENSG00000243317.8	ENST00000422968.2	2004	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGGAAAGAAGTGTTAAC	56	False	NA	NA	False	AATACA	-21	NA	135662563	135693418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_135662595_135688903_135689029_135691570
transcript_131341.known	chr7	+	2461	3	FSM	ENSG00000243317.8	ENST00000507606.3	2461	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_1	47.5	2031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGCTTTTTGGCTAGT	6	True	NA	29	True	AATAAA	-20	NA	135662513	135676416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_135662595_135672752_135672807_135674090
transcript_131342.known	chr7	-	1720	3	FSM	ENSG00000164707.16	ENST00000478310.1	1720	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATTGGTTCTCAGTAT	12	False	NA	NA	False	AATAAA	-5	NA	135728174	135707436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135708251_135721394_135721524_135727397
transcript_131343.known	chr7	-	3782	4	FSM	ENSG00000105887.11	ENST00000393085.4	3782	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	7.48331477354788	1584	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGTGTCAGCAGCATT	-22	True	NA	-14	True	AATAAA	-17	NA	135977359	135926759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135930013_135950598_135950683_135951516_135951631_135977028
transcript_131347.known	chr7	+	570	1	FSM	ENSG00000224469.1	ENST00000454750.1	570	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGATCCTATCCTCTTAT	NA	False	NA	NA	False	NA	NA	NA	137164042	137164612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_137164000_137164600
transcript_131353.known	chr7	-	1482	5	FSM	ENSG00000105894.12	ENST00000348225.7	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	28.0980426364542	1461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTGTTCAATAA	-19	True	NA	NA	False	AATAAA	-24	NA	137343733	137227340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137228076_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_131354.known	chr7	-	1599	6	FSM	ENSG00000105894.12	ENST00000393083.2	1599	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	140.735780809288	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGGTGATGCTGAAAAAA	2038	False	NA	NA	False	AATAAA	-1	NA	137343774	137227363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137228076_137236143_137236243_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_131355.known	chr7	+	862	1	FSM	ENSG00000230383.1	ENST00000456481.1	862	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1364	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTAAATGTCTTAAGAAC	13	False	NA	NA	False	NA	NA	NA	137721984	137722846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_137722000_137722800
transcript_131356.known	chr7	-	7441	12	FSM	ENSG00000182158.16	ENST00000330387.11	7441	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	18.351481125624	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTGCCCAGTCTTTATA	12	True	NA	-6	True	AATAAA	-21	NA	138002086	137874978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137880552_137882411_137882629_137884994_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_131357.known	chr7	-	2360	10	FSM	ENSG00000182158.16	ENST00000456390.5	2360	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	17.0619785227596	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-7	True	NA	NA	False	NA	NA	NA	138002067	137884266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_13136.known	chr1	+	10050	11	FSM	ENSG00000198625.14	ENST00000367182.8	10050	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	4.1821047332653	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTTGTCATTATTTT	4	True	NA	21	True	ATTAAA	-18	NA	204516405	204558120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_131361.known	chr7	-	1105	4	FSM	ENSG00000182158.16	ENST00000452463.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	3.74165738677394	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTTTCCCATATATG	13	True	NA	0	True	AATAAA	-35	NA	138002047	137912810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137913079_137915836_137916013_137928149_137928367_138001603
transcript_131364.known	chr7	+	8488	19	FSM	ENSG00000122779.18	ENST00000343526.9	8488	19	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_9	125.460288341042	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGTATGGAATAAAGG	6	True	NA	10	True	AATAAA	-21	NA	138460258	138589996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_131369.known	chr7	-	1420	12	FSM	ENSG00000157703.16	ENST00000436657.5	1420	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.01732535510787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTGATATTCTCCCATG	598	False	NA	-7	True	AATAAA	-18	NA	138664224	138594285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138663073_138663146_138664209
transcript_131372.known	chr7	-	665	4	FSM	ENSG00000157703.16	ENST00000478865.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGATATTCTCCCAT	6722	False	NA	-8	True	AATAAA	-17	NA	138626094	138594286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968
transcript_131374.known	chr7	-	1413	11	FSM	ENSG00000157703.16	ENST00000288513.9	1413	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	4.52658811910251	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATATTCTCCCATGA	1670	False	NA	-6	True	AATAAA	-19	NA	138663152	138594284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138663073
transcript_131375.known	chr7	-	12379	20	FSM	ENSG00000122778.10	ENST00000440172.5	12379	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11.1849225779525	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATATTTTCTGTTGATTT	35	True	NA	-4	True	AATAAA	-21	NA	138981318	138831380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_138838113_138840132_138840279_138844316_138844475_138852222_138852270_138861138_138861457_138867974_138868129_138869537_138869762_138871156_138871363_138879537_138879654_138881387_138881585_138894341_138894527_138898954_138899133_138903587_138903737_138905021_138905082_138906918_138907103_138908990_138909122_138911145_138911324_138912371_138912461_138916747_138919439_138981082
transcript_131378.known	chr7	+	4125	3	FSM	ENSG00000214128.11	ENST00000442682.7	4125	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGGCATAATTATCTGA	-7	True	NA	NA	False	AATAAA	-15	NA	138797993	138806759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_138798187_138801326_138801399_138802899
transcript_131379.known	chr7	+	1153	3	FSM	ENSG00000214128.11	ENST00000397602.7	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGGCGGCAGAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	138797951	138803748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_138798187_138801329_138801399_138802899
transcript_131380.nnic	chr7	+	478	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	65	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTGTTGCTTCTACT	335	False	NA	11	True	AATAAA	-13	NA	139035800	139036945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_139035986_139036652
transcript_131382.known	chr7	-	4776	13	FSM	ENSG00000105939.14	ENST00000464606.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	73.5917322499991	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGTTT	20	True	NA	86	True	NA	NA	NA	139109354	139045915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079103_139080244_139083779_139084033_139089623_139089760_139109023
transcript_131383.known	chr7	-	7177	13	FSM	ENSG00000105939.14	ENST00000242351.10	7177	13	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_9	23.6541927220807	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTGCCTTTATTTGAT	-3	True	NA	-4	True	AATAAA	-19	NA	139109720	139043514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
transcript_131385.known	chr7	+	4299	18	FSM	ENSG00000105948.13	ENST00000464848.5	4299	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	11.2612880700451	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATATTCTGTTGAGTG	6	True	NA	19	True	ATTAAA	-20	NA	139133777	139191986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_131388.known	chr7	+	2015	17	FSM	ENSG00000105948.13	ENST00000343187.8	2015	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.7882942280559	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGCATCATTGTATCAT	11	True	NA	4	True	NA	NA	NA	139133782	139189800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_13139.known	chr1	+	9926	10	FSM	ENSG00000198625.14	ENST00000454264.6	9926	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	10.7577132821863	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	-23	True	NA	20	True	ATTAAA	-17	NA	204516378	204558119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204537429_204537498_204538208_204538309_204542783_204542945_204546796_204546878_204549112
transcript_131391.known	chr7	+	1267	11	FSM	ENSG00000105948.13	ENST00000481482.5	1267	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	11.4350338871382	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAACTTGTAACC	8	True	NA	NA	False	NA	NA	NA	139133779	139168581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343
transcript_131394.known	chr7	+	1193	8	FSM	ENSG00000105948.13	ENST00000474035.6	1193	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	12.406384136683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGGCTGAGATTTGGA	6	True	NA	NA	False	AATAAA	-24	NA	139133777	139161343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947
transcript_131397.nic	chr7	+	1026	7	ISM	ENSG00000105948.13	ENST00000474035.6	1193	8	-42	12779	-8	316	5prime_fragment	FALSE	canonical	3	67	junction_5	7.43303437365925	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTGTTATGTCCATT	NA	False	NA	NA	False	AAAAAG	-17	NA	139133735	139148564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205
transcript_13140.known	chr1	+	10008	10	FSM	ENSG00000198625.14	ENST00000391947.6	10008	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	9.49203694852157	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTGTCATTATTT	-23	True	NA	20	True	ATTAAA	-17	NA	204516378	204558119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_204516510_204525483_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204538208_204538309_204542783_204542945_204544534_204544685_204546796_204546878_204549112
transcript_131401.known	chr7	+	1794	16	FSM	ENSG00000105948.13	ENST00000478836.6	1794	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	23.7340823851833	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATCATTGTATCATTT	6	True	NA	6	True	NA	NA	NA	139133777	139189802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139160947_139161023_139165131_139165235_139166842_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_131403.known	chr7	-	275	2	FSM	ENSG00000228360.1	ENST00000451614.1	275	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCCTCTACTCTTTGAG	3203	False	NA	-91	True	NA	NA	NA	139227828	139227536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_139227618_139227634
transcript_131406.known	chr7	+	14692	18	FSM	ENSG00000157741.15	ENST00000473989.8	14692	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_17	6.2208489724246	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTGTCTGTTGTGTTA	-6	True	NA	18	True	AATAAA	-18	NA	139231236	139308236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139231953_139237004_139237098_139251955_139252058_139258487_139258626_139259266_139259371_139261251_139261742_139266332_139266404_139269393_139269524_139272321_139272441_139273296_139273411_139273930_139274075_139276096_139276148_139279317_139279361_139282004_139282056_139283023_139284575_139293231_139293464_139293888_139293982_139297786
transcript_131408.known	chr7	+	2411	11	FSM	ENSG00000146963.18	ENST00000456182.5	2411	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	291.780071286577	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACCATTATTAAACTG	-16	True	NA	-28	True	AATAAA	-17	NA	139359911	139423151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139360323_139374400_139374472_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_131410.known	chr7	+	2661	10	FSM	ENSG00000146963.18	ENST00000354926.9	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_8	57.9501701656019	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGAGACTTAAGTTTC	-34	True	NA	29	True	AATAAA	-19	NA	139359893	139423454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_131422.known	chr7	+	432	3	FSM	ENSG00000164898.13	ENST00000488886.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCTCTGTAATTTTG	98	False	NA	17	True	ATTAAA	-17	NA	139340576	139345795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139340620_139344896_139344991_139345500
transcript_131426.nnic	chr7	+	590	2	NIC	ENSG00000164898.13	novel	460	2	NA	NA	-227	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCTCTGTAATTTTG	NA	False	NA	17	True	ATTAAA	-17	NA	139340222	139345795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_139340518_139345500
transcript_131427.known	chr7	+	460	2	FSM	ENSG00000164898.13	ENST00000481123.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGTTTTTCTCTGTAA	5	True	NA	12	True	ATTAAA	-12	NA	139340449	139345790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139340620_139345500
transcript_131428.known	chr7	+	386	2	FSM	ENSG00000164898.13	ENST00000482181.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTAAGTTTAAGG	12	True	NA	-1	True	NA	NA	NA	139340490	139345777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139340600_139345500
transcript_131429.known	chr7	-	535	1	FSM	ENSG00000273391.1	ENST00000608266.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTTTCCCTGGTGTTTC	852	False	NA	-21	True	AATAAA	-13	NA	139359566	139359031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_139359000_139359600
transcript_131430.known	chr7	+	1014	2	FSM	ENSG00000164898.13	ENST00000297534.7	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	0	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCCTTGTCCCCA	-11	True	NA	NA	False	AATAAA	-20	NA	139341336	139346328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139341523_139345500
transcript_131433.known	chr7	+	2190	3	FSM	ENSG00000236279.7	ENST00000520413.1	2190	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCAGAGAAGTCTGCCG	4387	False	NA	4	True	AATAAA	-14	NA	139539152	139544984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139540488_139542020_139542122_139544230
transcript_131434.known	chr7	+	2185	17	FSM	ENSG00000059377.18	ENST00000336425.10	2185	17	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_5	8.06589075986031	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTTTGAACCAGTGCTC	137	False	NA	NA	False	AATAAA	-32	NA	139778399	140020293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139778472_139780739_139780825_139782665_139782730_139787337_139787427_139829311_139829480_139872234_139872329_139875584_139875638_139911224_139911322_139936190_139936308_139953367_139953457_139955458_139955608_139957633_139957765_139961918_139962234_140007090_140007183_140015722_140015861_140017670_140017834_140020024
transcript_131437.known	chr7	+	1923	13	FSM	ENSG00000059377.18	ENST00000448866.7	1923	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.2801909579781	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTTTGAACCAGTGCTC	6	True	NA	NA	False	AATAAA	-32	NA	139829263	140020293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139829480_139872234_139872329_139875584_139875638_139911224_139911322_139936190_139936308_139953367_139953457_139955458_139955608_139957633_139957765_139961918_139962234_140007090_140007183_140015722_140015861_140017670_140017834_140020024
transcript_131442.known	chr7	+	728	5	FSM	ENSG00000059377.18	ENST00000481440.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	1.78535710713571	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGCATTGCAAAGTC	-7	True	NA	NA	False	ATTAAA	-16	NA	139778255	139797483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139778472_139780739_139780825_139782665_139782730_139787337_139787427_139797209
transcript_131452.known	chr7	+	582	3	FSM	ENSG00000059377.18	ENST00000474763.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCATTGCAAAGTCT	-9	True	NA	NA	False	ATTAAA	-17	NA	139778253	139797484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139778472_139787337_139787427_139797209
transcript_131453.known	chr7	+	459	3	FSM	ENSG00000059377.18	ENST00000462053.5	459	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCATTGCAAAGTCT	1116	False	NA	NA	False	ATTAAA	-17	NA	139777146	139797484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139777242_139787337_139787427_139797209
transcript_131455.known	chr7	+	2457	1	FSM	ENSG00000260231.2	ENST00000566699.2	2457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTCAGATATTTTTC	27	True	NA	NA	False	ATTAAA	-21	NA	140177183	140179640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140177200_140179600
transcript_131456.known	chr7	-	2736	2	FSM	ENSG00000157800.18	ENST00000493423.1	2736	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGTAACATATT	NA	False	NA	NA	False	AATAAA	-20	NA	140404433	140400335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_140402823_140404184
transcript_131457.known	chr7	-	3330	15	FSM	ENSG00000157800.18	ENST00000326232.14	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_7	62.5592372337236	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-31	True	NA	NA	False	AATAAA	-18	NA	140398530	140333751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_131458.known	chr7	-	3254	14	FSM	ENSG00000157800.18	ENST00000447932.6	3254	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	133.94231735601	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-3	True	NA	NA	False	AATAAA	-18	NA	140398502	140333751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_131459.known	chr7	-	2955	12	FSM	ENSG00000157800.18	ENST00000340308.7	2955	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	130.632915751299	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	42	True	NA	NA	False	AATAAA	-18	NA	140398457	140333751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_140335505_140337283_140337350_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_131460.known	chr7	+	2661	4	FSM	ENSG00000146955.11	ENST00000537763.6	2661	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	2.44948974278318	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTTGTACTGCCCCT	0	True	NA	16	True	ATTAAA	-29	NA	140404057	140427974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140404218_140407623_140407848_140411873_140412058_140425881
transcript_131466.nnic	chr7	-	1562	5	NNC	ENSG00000133606.11	novel	1625	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	330.130277314881	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTGTGTGAAATGTCT	835	False	NA	-37	True	AATAAA	-22	NA	140478673	140456185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_140456867_140459006_140459234_140459706_140459937_140471882_140472012_140478378
transcript_131468.known	chr7	-	1180	3	FSM	ENSG00000157764.14	ENST00000469930.2	1180	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAAGTCAAAATTTTTCAT	-9	True	NA	NA	False	AATAAA	-15	NA	140924742	140833971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_140834873_140850110_140850213_140924565
transcript_13147.known	chr1	+	547	6	FSM	ENSG00000198625.14	ENST00000367180.5	547	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.7302256817885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTTTTCCTTTTGTTTG	169	False	NA	NA	False	ATTAAA	-15	NA	204525489	204537041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_204525597_204526359_204526435_204530683_204530818_204532190_204532247_204532768_204532820_204536917
transcript_131472.known	chr7	+	2574	8	FSM	ENSG00000133597.11	ENST00000072869.9	2574	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	15.6113511815693	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCATTTCTTGAC	7	True	NA	17	True	AATAAA	-16	NA	140672944	140695110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140674264_140674610_140674758_140679154_140679284_140681041_140681138_140686989_140687242_140689596_140689726_140690759_140690814_140694662
transcript_131482.known	chr7	+	503	5	FSM	ENSG00000090266.13	ENST00000472695.5	503	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1815.20763275169	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	11	True	NA	28	True	ATTAAA	-33	NA	140696991	140706643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140697075_140700869_140700960_140702865_140703011_140704859_140704964_140706562
transcript_13149.known	chr1	+	2462	16	FSM	ENSG00000163531.17	ENST00000403080.5	2462	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	13.8740365030833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	20	True	NA	5	True	ATTAAA	-14	NA	204828694	204977139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_131491.known	chr7	+	420	4	FSM	ENSG00000090266.13	ENST00000460088.5	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1717.49455764947	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	7	True	NA	31	True	ATTAAA	-36	NA	140696987	140706646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140697075_140702865_140703011_140704859_140704964_140706562
transcript_131494.known	chr7	+	499	4	FSM	ENSG00000090266.13	ENST00000471136.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1724.79100183182	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTTGTGGATCTTTT	64	False	NA	29	True	ATTAAA	-34	NA	140697223	140706644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140697392_140702865_140703011_140704859_140704964_140706562
transcript_131497.known	chr7	+	559	2	FSM	ENSG00000090266.13	ENST00000461457.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTCTGGAAACTGATAAA	-11	True	NA	NA	False	AAGAAA	-45	NA	140696687	140721955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140696843_140721551
transcript_131498.known	chr7	+	465	4	FSM	ENSG00000090266.13	ENST00000247866.9	465	4	0	0	0	0	multi-exon	FALSE	canonical	3	3020	junction_3	445.789437091349	18464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	9	True	NA	28	True	ATTAAA	-33	NA	140696707	140706643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706562
transcript_131499.known	chr7	+	726	4	FSM	ENSG00000090266.13	ENST00000464566.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_3	1719.77446841794	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGATTTGAATTAGTGA	49	False	NA	NA	False	AATAAA	-25	NA	140696747	140706500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706118
transcript_13150.nic	chr1	+	2357	15	NIC	ENSG00000163531.17	novel	4957	24	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	16.5517124090974	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	NA	False	NA	5	True	ATTAAA	-14	NA	204929410	204977139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_204929503_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_131500.known	chr7	+	660	5	FSM	ENSG00000090266.13	ENST00000476181.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1816.43020441194	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	11	True	NA	31	True	ATTAAA	-36	NA	140696709	140706646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140696843_140698074_140698269_140702865_140703011_140704859_140704964_140706562
transcript_131509.known	chr7	-	622	3	FSM	ENSG00000090263.16	ENST00000467334.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	440	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGATTTGTTTGG	-12	True	NA	-10	True	AATAAA	-12	NA	141014966	141006168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141010418_141010618_141014910
transcript_131510.known	chr7	-	688	3	FSM	ENSG00000090263.16	ENST00000496958.5	688	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	505	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	525	False	NA	-9	True	AATAAA	-13	NA	141014429	141006167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141010418_141010661_141014351
transcript_131511.known	chr7	-	853	3	FSM	ENSG00000090263.16	ENST00000393008.7	853	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	481.5	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAAACTTCTTTCATC	-18	True	NA	NA	False	NA	NA	NA	141014679	141006053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141010418_141010661_141014550
transcript_131513.known	chr7	-	466	2	FSM	ENSG00000090263.16	ENST00000484502.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	0	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	13	True	NA	-9	True	AATAAA	-13	NA	141014648	141006167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141014550
transcript_131514.known	chr7	-	535	2	FSM	ENSG00000090263.16	ENST00000485202.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCTTGTTGGAAGATA	9	True	NA	NA	False	AAAAAG	-5	NA	141014652	141010227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141010661_141014550
transcript_131516.known	chr7	-	4210	3	FSM	ENSG00000090263.16	ENST00000324787.10	4210	3	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	250	3973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTCACCCCGTCTC	2	True	NA	NA	False	AATAAA	-17	NA	141014952	141002609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141010418_141010661_141014910
transcript_131517.known	chr7	-	541	2	FSM	ENSG00000090263.16	ENST00000496641.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGAGGTGTTTAATCAT	5	True	NA	NA	False	AATAGA	-10	NA	141014949	141010158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141010661_141014910
transcript_131519.nic	chr7	+	1698	3	ISM	ENSG00000261115.7	ENST00000565468.6	10726	4	153	41665	153	-41665	5prime_fragment	FALSE	canonical	2	19	junction_2	2	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTAGCCAGG	155	False	NA	NA	False	ACTAAA	-17	NA	141074216	141438715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_141074693_141212590_141212705_141437607
transcript_131520.known	chr7	+	3628	16	FSM	ENSG00000006530.18	ENST00000649286.2	3628	16	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_15	26.0524257774375	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTGATTCAGG	1	True	NA	NA	False	TATAAA	-17	NA	141551409	141655244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141651524_141651610_141652786
transcript_131525.known	chr7	+	2256	16	FSM	ENSG00000006530.18	ENST00000648068.1	2256	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	53.7701280142299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAAGTATGTATTTGCT	25	True	NA	-54	True	NA	NA	NA	141551433	141653831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141551500_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141651524_141651610_141652786
transcript_131526.nic	chr7	+	1238	15	NIC	ENSG00000006530.18	novel	1201	14	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_14	53.4532028783981	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATTAGCTTTTACTGT	-25	True	NA	13	True	AATAAA	-20	NA	141551383	141650599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141650472
transcript_131532.nic	chr7	+	1539	4	ISM	ENSG00000006530.18	ENST00000495028.5	567	5	-13	1401	2	567	5prime_fragment	FALSE	canonical	3	164	junction_1	32.6190128606002	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAGAAG	-12	True	NA	NA	False	AATAGA	-33	NA	141551396	141597907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561
transcript_131533.known	chr7	+	1201	14	FSM	ENSG00000006530.18	ENST00000650006.1	1201	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	55.1585128376531	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATTAGCTTTTACTGT	4030	False	NA	13	True	AATAAA	-20	NA	141555438	141650599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141650472
transcript_131537.known	chr7	-	1150	2	FSM	ENSG00000261570.2	ENST00000663125.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACAATGGGCTCGTA	NA	False	NA	NA	False	NA	NA	NA	141511823	141500248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141501301_141511725
transcript_131538.known	chr7	-	770	2	FSM	ENSG00000244701.1	ENST00000467537.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTATTGTATCTGCTGG	NA	False	NA	-5	True	AATAAA	-27	NA	141656810	141652380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141652884_141656543
transcript_131539.known	chr7	-	925	1	FSM	ENSG00000270157.1	ENST00000602609.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGATTATCTGGTGAG	NA	False	NA	NA	False	ATTAAA	-27	NA	141663846	141662921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141662900_141663800
transcript_131544.known	chr7	+	989	7	FSM	ENSG00000106028.11	ENST00000481508.1	989	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	1503.71436412933	8304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	9	False	NA	17	True	ATTAAA	-19	NA	141738606	141750461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738999_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_131545.known	chr7	+	676	7	FSM	ENSG00000106028.11	ENST00000484178.5	676	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1512.49800734488	8273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	2	True	NA	17	True	ATTAAA	-19	NA	141738599	141750461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738679_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_13155.known	chr1	-	4290	14	FSM	ENSG00000117222.14	ENST00000367164.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.6858238753803	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-12	True	NA	-21	True	AATAAA	-21	NA	205122015	205086141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205088816_205094986_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_131553.known	chr7	+	677	7	FSM	ENSG00000106028.11	ENST00000265304.11	677	7	0	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	738.285325753006	31370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	-6	True	NA	44	True	NA	NA	NA	141738357	141750488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_131554.known	chr7	+	636	7	FSM	ENSG00000106028.11	ENST00000498107.5	636	7	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_1	1014.1656121605	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGATTCTTCTTTGG	-6	True	NA	21	True	NA	NA	NA	141738357	141750354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738504_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_131555.known	chr7	+	2620	2	FSM	ENSG00000106028.11	ENST00000496622.1	2620	2	0	0	0	0	multi-exon	FALSE	canonical	3	2158	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGGATGTATATATTGA	-6	True	NA	NA	False	AATATA	-27	NA	141738357	141741690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738411_141739123
transcript_131556.known	chr7	+	630	7	FSM	ENSG00000106028.11	ENST00000467681.5	630	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	1420.73487439893	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATATTTCTGAGTGACC	32	True	NA	-19	True	NA	NA	NA	141738395	141750314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738576_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_131559.known	chr7	+	809	5	FSM	ENSG00000204983.15	ENST00000311737.12	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	1.80277563773199	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTGTGCCTGCT	0	True	NA	10	True	AATAAA	-17	NA	142749471	142753072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142749525_142750554_142750715_142751773_142752028_142752430_142752568_142752867
transcript_131562.nnic	chr7	+	778	4	NIC	ENSG00000204983.15	novel	809	5	NA	NA	-125	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	10.2089285540757	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTGTGCCTGCT	9091	False	NA	10	True	AATAAA	-17	NA	142749342	142753072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_142749525_142751773_142752028_142752430_142752568_142752867
transcript_131564.known	chr7	+	626	4	FSM	ENSG00000204983.15	ENST00000492062.1	626	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.2245562832516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTCTGTGTCTGTGCCT	2	True	NA	7	True	AATAAA	-14	NA	142750664	142753069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142750715_142751773_142752028_142752430_142752551_142752867
transcript_131565.known	chr7	+	852	6	FSM	ENSG00000275896.7	ENST00000633969.1	852	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.4142822451951	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTGTGTCTGTGCCTC	-2	True	NA	15	True	AATAAA	-15	NA	142770966	142774558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142771023_142772048_142772209_142772561_142772604_142773265_142773520_142773918_142774056_142774355
transcript_131567.known	chr7	+	817	5	FSM	ENSG00000275896.7	ENST00000632998.1	817	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.4233494836396	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGTGCCTCCTCCTT	60	False	NA	21	True	AATAAA	-21	NA	142760397	142774564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142760455_142772048_142772209_142773265_142773520_142773918_142774056_142774355
transcript_13157.known	chr1	-	4367	14	FSM	ENSG00000117222.14	ENST00000264515.11	4367	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.9409217454284	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-3	True	NA	-21	True	AATAAA	-21	NA	205121978	205086141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_131571.known	chr7	+	809	5	FSM	ENSG00000275896.7	ENST00000539842.6	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	6.60965203320114	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTGTGCCTCCT	1	True	NA	17	True	AATAAA	-17	NA	142770969	142774560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142771023_142772048_142772209_142773265_142773520_142773918_142774056_142774355
transcript_131583.nnic	chr7	+	1094	5	Fusion	ENSG00000211764.1_ENSG00000211772.11	novel	758	4	NA	NA	-286	0	multi-exon	FALSE	canonical	3	131	junction_1	47.2255227604735	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	314	False	NA	25	True	AATAAA	-29	NA	142796078	142802748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_131586.nnic	chr7	+	969	5	Fusion	ENSG00000211764.1_ENSG00000211765.1_ENSG00000211772.11	novel	758	4	NA	NA	35	0	multi-exon	FALSE	canonical	3	33	junction_1	89.579573564513	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	38	False	NA	25	True	AATAAA	-29	NA	142796399	142802748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142796611_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_131587.nnic	chr7	+	1017	5	Fusion	ENSG00000211764.1_ENSG00000211765.1_ENSG00000211772.11	novel	758	4	NA	NA	40	0	multi-exon	FALSE	canonical	3	13	junction_1	98.2318685559834	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	43	False	NA	25	True	AATAAA	-29	NA	142796404	142802748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142796664_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_131588.nnic	chr7	+	1012	5	Fusion	ENSG00000211767.1_ENSG00000211766.1_ENSG00000211772.11	novel	758	4	NA	NA	-55	0	multi-exon	FALSE	canonical	3	41	junction_1	86.1191035717395	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	20	False	NA	25	True	AATAAA	-29	NA	142796641	142802748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142796896_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_131590.nnic	chr7	+	1122	5	Fusion	ENSG00000211767.1_ENSG00000211766.1_ENSG00000211772.11_ENSG00000211768.1	novel	758	4	NA	NA	-13	0	multi-exon	FALSE	canonical	3	24	junction_1	93.4729238870808	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	-6	True	NA	25	True	AATAAA	-29	NA	142796683	142802748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142797048_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_131609.known	chr7	+	758	4	FSM	ENSG00000211772.11	ENST00000466254.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	4.64279609239471	531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	76	False	NA	25	True	AATAAA	-29	NA	142801040	142802748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142801428_142801943_142801962_142802104_142802212_142802502
transcript_131610.known	chr7	-	447	2	FSM	ENSG00000237254.2	ENST00000417977.2	447	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGAGCTGGGTGGGGC	-3	True	NA	NA	False	NA	NA	NA	142813399	142812585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_142812878_142813244
transcript_131611.known	chr7	+	3999	20	FSM	ENSG00000106123.12	ENST00000652003.1	3999	20	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_3	25.9572416360406	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	-25	True	NA	18	True	ATTAAA	-21	NA	142855075	142871093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_131617.nnic	chr7	+	517	3	NIC	ENSG00000106123.12	novel	4409	18	NA	NA	5	44	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	57.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGATTGACCCAGAAAC	-20	True	NA	NA	False	AAAAAG	-1	NA	142855080	142862832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_142855386_142861051_142861187_142862755
transcript_131618.known	chr7	+	584	4	FSM	ENSG00000106123.12	ENST00000497095.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	57.6445044118595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAGAACTGGAATAA	3	True	NA	NA	False	AGTAAA	-3	NA	142855103	142862788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142855386_142861051_142861187_142861999_142862134_142862755
transcript_13162.known	chr1	+	552	1	FSM	ENSG00000213041.4	ENST00000448403.2	552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAGCTTTAAAGTAAAT	NA	False	NA	NA	False	AAGAAA	-33	NA	205202190	205202742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205202200_205202700
transcript_131620.known	chr7	-	2494	19	FSM	ENSG00000197993.9	ENST00000355265.7	2494	19	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_13	19.9308217171543	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCCTGCTATGTT	-19	True	NA	-14	True	AATAAA	-32	NA	142962363	142941113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953957_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
transcript_131628.nic	chr7	-	1672	10	ISM	ENSG00000197993.9	ENST00000479768.6	1856	11	-68	6152	-29	2060	5prime_fragment	FALSE	canonical	3	41	junction_4	19.9319831079921	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCCTTTCTTTGTCATGA	NA	False	NA	NA	False	TATAAA	-19	NA	142962392	142952225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_142952639_142953807_142953957_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
transcript_13163.known	chr1	-	3391	7	FSM	ENSG00000163545.11	ENST00000367157.6	3391	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	22.762664362699	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCCTGCTGTTCTCTT	5	True	NA	-6	True	ATTAAA	-20	NA	205321745	205302062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205304514_205305198_205305332_205306187_205306308_205308164_205308231_205308580_205308733_205311704_205311826_205321397
transcript_131630.known	chr7	-	786	6	FSM	ENSG00000197993.9	ENST00000467543.6	786	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.3119814937164	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGAGGGATGCACTGGC	17	True	NA	NA	False	NA	NA	NA	142962327	142957829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961869_142962203
transcript_131632.nnic	chr7	-	2104	5	NIC	ENSG00000197993.9	novel	1856	11	NA	NA	-29	1391	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	37.0270171631472	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTACTGAGGCCATCCAA	NA	False	NA	NA	False	AATAGA	-12	NA	142962392	142956438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_142957974_142958303_142958429_142960927_142961105_142961794_142961873_142962203
transcript_131640.known	chr7	+	1257	4	FSM	ENSG00000178826.11	ENST00000409244.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGATCCCAAAGCCTAT	-8	True	NA	NA	False	ATTAAA	-15	NA	143284950	143287296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143284975_143285347_143285446_143285940_143286203_143286423
transcript_131643.known	chr7	+	1907	3	FSM	ENSG00000178826.11	ENST00000409541.5	1907	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCCGTCTCCGTGAAGTT	-5	True	NA	2	True	AATAAA	-15	NA	143284953	143288047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143284975_143285940_143286203_143286423
transcript_131645.known	chr7	+	675	2	FSM	ENSG00000178826.11	ENST00000487419.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGATGAGGTAGGGAGGT	-12	True	NA	NA	False	NA	NA	NA	143284946	143287070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143284975_143286423
transcript_131648.known	chr7	+	1032	8	FSM	ENSG00000197448.14	ENST00000358406.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	20.3670402005449	2271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	4	True	NA	29	True	AATAAA	-23	NA	143263440	143269115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_131649.known	chr7	+	1185	7	FSM	ENSG00000197448.14	ENST00000479303.1	1185	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	20.9204843793509	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	19	True	NA	29	True	AATAAA	-23	NA	143263455	143269115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265297_143267616_143267734_143268090_143268185_143268787
transcript_131650.known	chr7	+	850	7	FSM	ENSG00000197448.14	ENST00000443571.6	850	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	118.4604950559	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCCCAATTCTGCTTTCC	4	True	NA	-24	True	NA	NA	NA	143263440	143269062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143263586_143264085_143264168_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_131651.known	chr7	+	875	2	FSM	ENSG00000197448.14	ENST00000489654.1	875	2	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGGTGAGAGGCTGA	10	True	NA	NA	False	NA	NA	NA	143263495	143264870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143263586_143264085
transcript_131652.known	chr7	+	1724	2	FSM	ENSG00000178826.11	ENST00000471161.1	1724	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTCCGTGAAGTTA	388	False	NA	3	True	AATAAA	-16	NA	143285346	143288048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143285446_143286423
transcript_131653.known	chr7	+	4089	11	FSM	ENSG00000106144.20	ENST00000310447.10	4089	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	10.675204916066	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCAATATCTGTTT	3	True	NA	20	True	AATAAA	-20	NA	143288350	143307696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143288530_143291539_143291691_143292299_143292468_143292616_143292699_143294229_143294325_143294596_143294774_143299922_143300052_143300203_143300295_143303783_143303934_143304673_143304784_143304939
transcript_131654.nic	chr7	+	1008	7	ISM	ENSG00000188037.14	ENST00000432192.6	2560	23	25785	-273	24114	-76	3prime_fragment	FALSE	canonical	2	6	junction_1	2.19215773966098	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGGTGAACTTGTGT	NA	False	NA	NA	False	CATAAA	-18	NA	143345591	143352007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_143345763_143346139_143346252_143346578_143346659_143346910_143346950_143350371_143350477_143350567_143350655_143351593
transcript_131658.nnic	chr7	+	619	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2266	80	multi-exon	FALSE	canonical	1	1	junction_1	7	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCCATTATTCTAGCA	NA	False	NA	NA	False	ATTAAA	-19	NA	143361632	143364309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_143361775_143363189_143363258_143363900
transcript_131659.nnic	chr7	+	689	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2053	80	multi-exon	FALSE	canonical	1	6	junction_1	4.5	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCCATTATTCTAGCA	137	False	NA	NA	False	ATTAAA	-19	NA	143361845	143364309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_143362058_143363189_143363258_143363900
transcript_131661.nnic	chr7	+	525	2	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2249	71	multi-exon	FALSE	canonical	1	7	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAACAGCTTCCATT	NA	False	NA	NA	False	ATTAAA	-10	NA	143361649	143364300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_143361775_143363900
transcript_131662.known	chr7	-	648	2	FSM	ENSG00000232533.2	ENST00000429630.2	1186	2	535	3	-241	0	multi-exon	FALSE	canonical	3	37	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCTATATGACTCAGTAT	2562	False	NA	-11	True	AATAAA	-19	NA	143380495	143379691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143380110_143380265
transcript_131665.nnic	chr7	+	837	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	8.37987005998436	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	NA	False	NA	8	True	AATAAA	-23	NA	143407601	143415830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143407891_143414323_143414446_143415067_143415200_143415536
transcript_131671.nnic	chr7	+	717	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	2999	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	8.37987005998436	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	2995	False	NA	8	True	AATAAA	-23	NA	143410811	143415830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143414323_143414446_143415067_143415200_143415536
transcript_131674.known	chr7	+	484	3	FSM	ENSG00000229153.6	ENST00000421648.2	516	3	29	3	20	0	multi-exon	FALSE	canonical	3	8	junction_1	10	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	16	False	NA	8	True	AATAAA	-23	NA	143407832	143415830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143407891_143415067_143415200_143415536
transcript_131679.nnic	chr7	+	599	3	NNC	ENSG00000229153.6	novel	529	3	NA	NA	2995	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	2991	False	NA	8	True	AATAAA	-23	NA	143410807	143415830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143415067_143415200_143415536
transcript_131680.nnic	chr7	+	1059	3	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3048	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGGACAATTTTTACTT	-6	True	NA	10	True	AATAAA	-20	NA	143410860	143496772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143415067_143415200_143495965
transcript_131682.nnic	chr7	+	746	3	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3052	3627	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	8	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCTTGTCTTCTTGAG	-2	True	NA	NA	False	ATTAAA	-25	NA	143410864	143500399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143415067_143415200_143499901
transcript_131686.nic	chr7	+	446	2	ISM	ENSG00000229153.6	ENST00000421648.2	516	3	-57	464	-37	-461	5prime_fragment	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGAGAGATCACTTT	NA	False	NA	NA	False	AAAAAG	-1	NA	143407746	143415369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_143407891_143415067
transcript_131687.nnic	chr7	+	474	2	NNC	ENSG00000229153.6	novel	529	3	NA	NA	2995	-462	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTAAGAGAGATCACTT	2991	False	NA	NA	False	NA	NA	NA	143410807	143415368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143415067
transcript_131688.nnic	chr7	+	493	2	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3060	-378	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGGCAATTCTCCCTGT	6	True	NA	NA	False	AATAAA	-28	NA	143410872	143415452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143415067
transcript_131690.known	chr7	-	3310	18	FSM	ENSG00000146904.9	ENST00000275815.4	3310	18	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_12	40.6425893516168	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	8	True	NA	-8	True	NA	NA	NA	143408856	143391128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398600_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_131694.nic	chr7	-	1407	3	ISM	ENSG00000146904.9	ENST00000488068.5	2922	16	-82	9020	-31	395	5prime_fragment	FALSE	canonical	3	345	junction_2	26	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCATCATGTTATTGGC	NA	False	NA	-6	True	AATAAA	-20	NA	143408887	143400430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_143401606_143407610_143407679_143408723
transcript_131695.known	chr7	+	2228	10	FSM	ENSG00000159840.16	ENST00000322764.10	2228	10	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	191.901659486259	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTAGTCAGCTCTTT	21	True	NA	17	True	AATAAA	-22	NA	143381344	143391111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143381410_143381556_143381780_143382247_143382448_143382592_143382686_143382800_143383323_143388218_143388340_143388488_143388659_143388766_143388946_143389856_143389978_143390577
transcript_131696.known	chr7	-	651	2	FSM	ENSG00000146904.9	ENST00000458129.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTTCTCTCAGCTCCT	4285	False	NA	-3	True	AATAAA	-28	NA	143391391	143390288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143390646_143391097
transcript_131699.known	chr7	-	5754	9	FSM	ENSG00000198420.10	ENST00000479870.6	5754	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_8	30.2549066268597	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACTTCACATTGATT	-24	True	NA	NA	False	AATAAA	-17	NA	143902176	143851374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
transcript_13170.nic	chr1	-	818	4	NIC	ENSG00000186007.10	novel	741	4	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	3.68178700572909	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	7084	False	NA	NA	False	ATTAAA	-35	NA	205450012	205381380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_205381857_205384287_205384365_205420454_205420575_205449867
transcript_131701.known	chr7	-	840	3	FSM	ENSG00000198420.10	ENST00000460532.5	840	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTCCCTGGGAACCT	2	True	NA	78	True	NA	NA	NA	143882883	143876107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143876623_143881922_143882100_143882735
transcript_131702.known	chr7	-	576	2	FSM	ENSG00000198420.10	ENST00000478172.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTTGCTCATAGGAGGAC	NA	False	NA	14	True	AATGAA	-42	NA	143902198	143876171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143876623_143902073
transcript_131706.known	chr7	+	2588	1	FSM	ENSG00000288784.1	ENST00000486333.2	2615	1	0	27	0	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAATAAAGATGGTTTGA	NA	False	NA	NA	False	NA	NA	NA	144183465	144186053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_144183500_144186100
transcript_13171.nic	chr1	-	1245	4	Fusion	ENSG00000186007.10_ENSG00000281406.2	novel	741	4	NA	NA	258	0	multi-exon	FALSE	canonical	3	9	junction_1	5.8878405775519	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	608	False	NA	NA	False	ATTAAA	-35	NA	205456488	205381380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_205381857_205384287_205384365_205420454_205420575_205455916
transcript_131710.nic	chr7	+	476	5	NIC	ENSG00000244198.7	novel	531	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_2	86.0388720288684	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195596	144243835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144243746
transcript_131714.nic	chr7	+	577	5	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_2	30.3768003581681	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195851	144243835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144196058_144207692_144207805_144239039_144239096_144239274_144239389_144243746
transcript_131716.nnic	chr7	+	420	4	NIC	ENSG00000244198.7	novel	819	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_2	85.1521514049345	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195596	144243835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144195702_144207692_144207805_144239274_144239389_144243746
transcript_131719.nnic	chr7	+	521	4	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	105	junction_1	14.8174071805952	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195851	144243835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144196058_144207692_144207805_144239274_144239389_144243746
transcript_131723.known	chr7	+	4894	3	FSM	ENSG00000244198.7	ENST00000663681.1	4894	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	119.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATATACTGTGCTATAC	NA	False	NA	-20	True	ATTAAA	-42	NA	144195596	144255116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_144195702_144207692_144207805_144250439
transcript_131730.known	chr7	-	2609	2	FSM	ENSG00000213214.6	ENST00000378115.3	2609	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATATTCAAACCATCT	NA	False	NA	NA	False	AATAAA	-22	NA	144195833	144186082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144188396_144195537
transcript_131739.known	chr7	-	819	6	FSM	ENSG00000244479.7	ENST00000486094.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	38.1240081838203	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144355685	144307147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144350717_144350825_144355337
transcript_131740.nic	chr7	-	573	5	NIC	ENSG00000244479.7	novel	422	5	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_3	25.377155080899	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355187	144307144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144354981
transcript_131748.nic	chr7	-	520	4	NIC	ENSG00000244479.7	novel	422	5	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_3	14.0554457615387	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	NA	False	NA	NA	False	AATAAA	-18	NA	144355187	144307144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144354981
transcript_13175.nnic	chr1	-	909	4	NNC	ENSG00000186007.10	novel	637	3	NA	NA	-1254	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	9.2736184954957	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	NA	False	NA	NA	False	ATTAAA	-35	NA	205457208	205381380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_205381857_205420454_205420575_205455916_205456036_205457014
transcript_131758.known	chr7	-	257	2	FSM	ENSG00000244479.7	ENST00000493539.1	257	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGTAAACTTTTCTGG	NA	False	NA	NA	False	AGTAAA	-11	NA	144343301	144300394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144300537_144343186
transcript_131759.known	chr7	+	5482	15	FSM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_13	41.6993613223737	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTCAAACTCCTCA	-4	True	NA	23	True	AATAAA	-20	NA	144355401	144380632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
transcript_13176.nic	chr1	-	741	3	NIC	ENSG00000186007.10	novel	786	4	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_2	11	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	7084	False	NA	NA	False	ATTAAA	-35	NA	205450012	205381380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_205381857_205420454_205420575_205449867
transcript_131763.known	chr7	-	2439	9	FSM	ENSG00000196511.15	ENST00000360057.7	2439	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2.87228132326901	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTCCTGAAGCTTAG	-33	True	NA	NA	False	AATAAA	-22	NA	144836053	144451940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144453664_144548490_144548603_144591422_144591570_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_131764.known	chr7	-	2283	8	FSM	ENSG00000196511.15	ENST00000378099.7	2283	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.61967413123427	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAATATAGTTTCCT	-33	True	NA	NA	False	AATAAA	-13	NA	144836053	144451949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144453664_144548490_144548603_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_131765.nic	chr7	-	699	5	NIC	ENSG00000196511.15	novel	460	6	NA	NA	-37	249	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.60298815988049	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCAACTTTTATTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	144836090	144681490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144681865_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_131766.known	chr7	-	521	2	FSM	ENSG00000196511.15	ENST00000548460.2	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGTGTTTTAAATCTA	21	True	NA	NA	False	AATAAA	-18	NA	144835999	144835130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144835619_144835966
transcript_131768.known	chr7	+	6101	5	FSM	ENSG00000174469.23	ENST00000636242.1	6101	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	370.001689185333	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTCATTTAACTAAAAT	NA	False	NA	-50	True	AATGAA	-42	NA	148263054	148420920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148263237_148267032_148267127_148383648_148383889_148409390_148409472_148415416
transcript_13177.known	chr1	-	637	3	FSM	ENSG00000186007.10	ENST00000495594.2	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGCGTTTTTCTTTC	1142	False	NA	NA	False	ATTAAA	-38	NA	205455954	205381377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205381857_205420454_205420575_205455916
transcript_131775.known	chr7	+	6076	4	FSM	ENSG00000174469.23	ENST00000463592.3	6076	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349.077196174269	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTTCGTGTTTTGTA	0	True	NA	28	True	AATAAA	-31	NA	148339460	148420998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148339634_148383648_148383889_148409390_148409472_148415416
transcript_131776.known	chr7	+	3086	22	FSM	ENSG00000055130.18	ENST00000662716.1	3086	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	132.502102837034	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTAATGTGTGAAAA	298	False	NA	4	True	NA	NA	NA	148698071	148800988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148698260_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_131778.known	chr7	+	2938	22	FSM	ENSG00000055130.18	ENST00000665936.1	2938	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	131.938520692898	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	743	False	NA	-12	True	NA	NA	NA	148698516	148801004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148698541_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_131779.known	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000602748.5	3054	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	124.124982730587	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACAAGTCGCATTG	0	True	NA	9	True	AATAAA	-14	NA	148698644	148801025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148698764_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_13178.known	chr1	-	604	2	FSM	ENSG00000186007.10	ENST00000367149.6	604	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	1473	False	NA	NA	False	ATTAAA	-35	NA	205420582	205381380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205381857_205420454
transcript_131781.known	chr7	+	3147	22	FSM	ENSG00000055130.18	ENST00000325222.9	3147	22	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_8	62.6037460935311	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTAGTGTCTTCCTGT	-5	True	NA	24	True	AATAAA	-25	NA	148698902	148801110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_131786.nic	chr7	+	919	6	ISM	ENSG00000055130.18	ENST00000655324.1	2887	21	-28	41402	-19	-905	5prime_fragment	FALSE	canonical	3	512	junction_3	42.4056599995802	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGGAATGGTGAAACCA	102	False	NA	NA	False	TTTAAA	-13	NA	148698837	148759579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547
transcript_13179.known	chr1	+	2986	16	FSM	ENSG00000117266.16	ENST00000429964.7	2986	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	12.397132284883	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	-24	True	NA	22	True	AATATA	-20	NA	205504668	205532790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205504797_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_131794.nic	chr7	+	1801	2	ISM	ENSG00000055130.18	ENST00000655324.1	2887	21	-28	69411	-19	-28914	5prime_fragment	FALSE	canonical	3	549	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCAGTGGTTTTTAG	102	False	NA	10	True	CATAAA	-21	NA	148698837	148731570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_148699030_148729961
transcript_131795.known	chr7	+	3056	22	FSM	ENSG00000055130.18	ENST00000662670.1	3056	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	137.893152628947	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTCGCATT	15	True	NA	8	True	AATAAA	-13	NA	148698922	148801024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756967_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_131796.known	chr7	-	2466	20	FSM	ENSG00000106462.12	ENST00000483967.5	2466	20	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_17	90.8459168560607	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAATTTATAGTAATGA	13	True	NA	NA	False	AAAAAG	-40	NA	148884287	148807524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846496_148846599_148847181_148847306_148884163
transcript_131797.known	chr7	-	2591	20	FSM	ENSG00000106462.12	ENST00000460911.5	2591	20	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_17	62.2729671500654	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	0	True	NA	-16	True	AATAAA	-16	NA	148884245	148807384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_131798.known	chr7	-	964	1	FSM	ENSG00000286180.1	ENST00000652060.1	964	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGGGTTTTCCTAGA	NA	False	NA	NA	False	AATAAA	-18	NA	148941228	148940264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_148940300_148941200
transcript_131799.known	chr7	+	1906	1	FSM	ENSG00000281189.1	ENST00000627071.1	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTGGTGTTGATATG	NA	False	NA	NA	False	AATAAA	-20	NA	148987526	148989432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148987500_148989400
transcript_13180.known	chr1	+	3141	16	FSM	ENSG00000117266.16	ENST00000360066.6	3141	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	21.6267324289999	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAGCAGTCTCGTACAGAA	0	True	NA	25	True	AATATA	-23	NA	205504598	205532793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205504879_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_131800.known	chr7	-	2921	10	FSM	ENSG00000155660.11	ENST00000286091.9	2921	10	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	1287.31846856408	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAGAACTGCGTTAGAA	-2	True	NA	-23	True	AATAAA	-14	NA	149028662	149003067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_149004210_149005140_149005375_149005896_149006057_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
transcript_131802.known	chr7	-	3144	3	FSM	ENSG00000197362.15	ENST00000316286.13	3144	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	25.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	149090782	149069642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_149072474_149074385_149074539_149090622
transcript_131805.nnic	chr7	-	920	2	NNC	ENSG00000197362.15	novel	3209	4	NA	NA	0	-13576	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTAAAGATGACTAGG	NA	False	NA	NA	False	AAAAAG	-6	NA	149090782	149083218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_149083979_149090622
transcript_131806.nnic	chr7	-	620	2	NNC	ENSG00000197362.15	novel	3209	4	NA	NA	0	-13876	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCCGGGCGCGGTGGA	NA	False	NA	NA	False	AATAAA	-23	NA	149090782	149083518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_149083979_149090622
transcript_131807.known	chr7	-	3198	4	FSM	ENSG00000204947.9	ENST00000378061.7	3198	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	14.1656862405839	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACCCATGTGTTCTTT	-3	True	NA	-4	True	AATAAA	-28	NA	149126324	149102783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_149105567_149112136_149112296_149118221_149118349_149126195
transcript_131809.nic	chr7	-	789	2	ISM	ENSG00000204947.9	ENST00000378061.7	3198	4	46	14859	28	-5625	5prime_fragment	FALSE	canonical	3	88	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACTAAGTAATCTAAT	43	False	NA	NA	False	NA	NA	NA	149126278	149117642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_149118349_149126195
transcript_131813.nnic	chr7	-	634	2	Antisense	novelGene_ENSG00000197024.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGACCTGCGAGAACAAAG	NA	False	NA	NA	False	NA	NA	NA	149147328	149145944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_149146353_149147102
transcript_131815.nnic	chr7	-	754	2	Antisense	novelGene_ENSG00000197024.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGACCTGCGAGAA	NA	False	NA	NA	False	NA	NA	NA	149147333	149145949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_149146353_149146982
transcript_131820.known	chr7	+	2807	5	FSM	ENSG00000170260.9	ENST00000335870.7	2807	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	4.32290411644765	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATACTGGATGTTTTTC	-5	True	NA	6	True	AATAAA	-30	NA	149239650	149255606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149239803_149250158_149250549_149250680_149250808_149252705_149252796_149253558
transcript_131821.known	chr7	+	3763	17	FSM	ENSG00000133619.18	ENST00000496259.6	3827	17	60	4	-46	0	multi-exon	FALSE	canonical	3	16	junction_1	13.5271717295228	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCCCTGACTCCTATA	-8	True	NA	16	True	ATTAAA	-16	NA	149715010	149734571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721382_149721536_149722421_149722554_149722782_149722957_149723733_149723890_149724651_149724850_149725314_149725489_149725886_149726061_149728522_149728676_149729187_149729371_149730146_149730342_149730427_149730569_149731671_149731777_149733205
transcript_131827.known	chr7	+	594	4	FSM	ENSG00000106479.11	ENST00000460379.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGGTTATACAGGACC	-42	True	NA	NA	False	NA	NA	NA	149838374	149848024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149838462_149844624_149844737_149846150_149846256_149847734
transcript_131832.known	chr7	+	1666	4	FSM	ENSG00000171130.19	ENST00000479613.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	97.537457192381	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTACTGTTTGGTGA	-31	True	NA	17	True	AATAAA	-12	NA	149873975	149880689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878747_149879334
transcript_131833.known	chr7	+	1723	4	FSM	ENSG00000171130.19	ENST00000425642.3	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	18.263503375737	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTTGGTGACAAAGC	-38	True	NA	23	True	AATAAA	-18	NA	149873968	149880695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879334
transcript_131836.known	chr7	+	1766	5	FSM	ENSG00000171130.19	ENST00000471877.5	1766	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	105.8828952192	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTGGTGACAAAGCC	-20	True	NA	24	True	AATAAA	-19	NA	149873986	149880696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879165_149879226_149879334
transcript_131849.known	chr7	-	685	6	FSM	ENSG00000106538.10	ENST00000223271.8	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	2632	junction_5	159.731023912075	15320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTCAGCTCCTTGT	13	True	NA	-15	True	AATAAA	-13	NA	150341629	150338328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_13185.known	chr1	+	1134	7	FSM	ENSG00000117266.16	ENST00000512922.5	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	11.146748404804	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGCCTCGGGGGCAG	-3	True	NA	NA	False	NA	NA	NA	205504595	205526835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205504797_205523146_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774
transcript_131850.known	chr7	-	1907	4	FSM	ENSG00000106538.10	ENST00000478771.2	1907	4	0	0	0	0	multi-exon	FALSE	canonical	3	2752	junction_3	108.192215780783	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGTTGCACGACTT	-18	True	NA	-3	True	AATAAA	-25	NA	150341660	150338316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099
transcript_131851.known	chr7	-	1618	5	FSM	ENSG00000106538.10	ENST00000466675.5	1618	5	0	0	0	0	multi-exon	FALSE	canonical	3	2752	junction_3	132.594306061761	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCCATGATAATAAAGCT	-1	True	NA	-44	True	NA	NA	NA	150341643	150338357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435
transcript_131852.known	chr7	-	583	5	FSM	ENSG00000106538.10	ENST00000467793.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	1202.50779623252	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-20	True	NA	-23	True	AATAAA	-5	NA	150341662	150338336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338440_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_131853.known	chr7	-	563	5	FSM	ENSG00000106538.10	ENST00000482669.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	1241.64394554156	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCACTGGTAGGCACCA	-18	True	NA	NA	False	NA	NA	NA	150341660	150338624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341609
transcript_131854.known	chr7	+	582	3	FSM	ENSG00000284048.2	ENST00000483664.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCCAGATGTGAATG	-14	True	NA	NA	False	NA	NA	NA	150379328	150410597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150379393_150388421_150388502_150410159
transcript_131856.known	chr7	+	559	2	FSM	ENSG00000284691.1	ENST00000641234.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGACACATCCAGTAAG	8147	False	NA	NA	False	NA	NA	NA	150404863	150410264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150405318_150410159
transcript_131857.known	chr7	+	571	2	FSM	ENSG00000284691.1	ENST00000642008.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCCAGATGTGAATGAA	97	False	NA	NA	False	NA	NA	NA	150405773	150410599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150405905_150410159
transcript_131859.known	chr7	+	2261	3	FSM	ENSG00000196456.13	ENST00000329630.10	2261	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	15	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATGGTTTGATGTCCCT	-13	True	NA	8	True	AATAAA	-15	NA	150379329	150398630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150379393_150388421_150388502_150396512
transcript_131862.known	chr7	+	1945	3	FSM	ENSG00000133574.10	ENST00000255945.4	1945	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGCAGAATTGGAAC	-8	True	NA	NA	False	AATAAA	-18	NA	150567389	150573953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150567438_150569887_150569960_150572128
transcript_131866.known	chr7	+	1033	7	FSM	ENSG00000002933.9	ENST00000004103.8	1033	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.21335164821342	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCGCTTAGTTATTCC	-2	True	NA	6	True	AATAAA	-21	NA	150800768	150805118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150800829_150801535_150801725_150802214_150802326_150803399_150803457_150803619_150803833_150804361_150804473_150804826
transcript_131867.known	chr7	+	1530	7	FSM	ENSG00000002933.9	ENST00000484928.5	1530	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.49071198499986	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCCCAGGTTCTCGCTT	695	False	NA	-3	True	AATAAA	-12	NA	150800402	150805109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150800969_150801535_150801725_150802214_150802326_150803399_150803457_150803619_150803833_150804361_150804473_150804826
transcript_131868.known	chr7	-	1115	7	FSM	ENSG00000106565.18	ENST00000326442.10	1115	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	3.35410196624968	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCCCAGAAAGATATG	1	True	NA	-9	True	AATAAA	-16	NA	150800364	150791300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365_150796575_150800297
transcript_13187.known	chr1	+	588	4	FSM	ENSG00000174514.13	ENST00000465651.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTCTCAATGGCTATTCA	-10	True	NA	NA	False	NA	NA	NA	205592036	205600550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205592288_205597779_205597851_205599130_205599252_205600405
transcript_131878.known	chr7	-	1795	9	ISM	ENSG00000181652.20	ENST00000639579.2	3423	14	5693	21	-2805	10	3prime_fragment	FALSE	canonical	1	1	junction_1	2.48746859276655	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGCTCATGGCTGTTGC	9946	False	NA	-25	True	NA	NA	NA	151018801	151015171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_151015714_151015881_151016024_151016108_151016236_151016430_151016528_151016687_151016822_151017035_151017273_151017870_151018051_151018293_151018448_151018619
transcript_13188.known	chr1	-	2118	3	FSM	ENSG00000158711.14	ENST00000289703.8	2118	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTATTATCACCTTTAT	35	False	NA	-18	True	AATAAA	-18	NA	205631962	205619267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205620839_205623675_205623892_205631631
transcript_131881.known	chr7	+	1111	6	FSM	ENSG00000164867.11	ENST00000477227.1	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	9.2217135067188	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGGATTCAGCATTAT	-10	True	NA	NA	False	NA	NA	NA	151010532	151014289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151010808_151010898_151010987_151012350_151012473_151013230_151013380_151013723_151013919_151014007
transcript_131883.known	chr7	-	689	2	FSM	ENSG00000181652.20	ENST00000404733.2	689	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGATGGTCAAGTTGGGA	4561	False	NA	NA	False	NA	NA	NA	151014304	151013294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151013409_151013729
transcript_131884.known	chr7	+	2487	17	FSM	ENSG00000197150.13	ENST00000297504.10	2487	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.6317064394862	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAGTCTGCCAGAGTCA	-2	True	NA	13	True	NA	NA	NA	151028449	151045562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151028611_151031240_151031292_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_131886.known	chr7	+	4656	16	FSM	ENSG00000197150.13	ENST00000358849.9	4656	16	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	9.87026961243827	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTATGCAGCCCTTT	-2	True	NA	7	True	AATAAA	-20	NA	151028449	151047782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_131891.known	chr7	+	1994	15	FSM	ENSG00000197150.13	ENST00000482309.5	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19.7826196651588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGCCTACTGGGGACT	NA	False	NA	NA	False	GGGGCT	-7	NA	151028425	151045409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151028611_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_131893.known	chr7	+	1596	10	FSM	ENSG00000197150.13	ENST00000477092.5	1596	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	20.8776565545532	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGTAACAGATCATC	15	False	NA	19	True	CATAAA	-29	NA	151028466	151037570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037240
transcript_131894.nic	chr7	+	1610	10	NIC	ENSG00000197150.13	novel	1596	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	23.8736385430447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAAGGGTGAAGACCCG	NA	False	NA	35	True	AGTAAA	-16	NA	151028425	151037586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037283
transcript_13190.known	chr1	-	3391	5	FSM	ENSG00000158715.6	ENST00000367145.4	3391	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	8.87059749960509	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCATGTGTTTCTTTTAG	1	True	NA	-5	True	ATTAAA	-19	NA	205680509	205657850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205659672_205661860_205662127_205662832_205663619_205664484_205664887_205680393
transcript_131900.known	chr7	+	2053	11	FSM	ENSG00000213199.8	ENST00000349064.10	2053	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.38537208837531	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGCTGTTTCTCTTAC	0	True	NA	15	True	AATAAA	-15	NA	151048530	151052754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151049420_151050105_151050257_151050480_151050609_151050757_151050954_151051038_151051096_151051171_151051320_151051809_151051902_151051982_151052063_151052165_151052238_151052415_151052475_151052573
transcript_131901.known	chr7	+	825	4	FSM	ENSG00000213199.8	ENST00000498105.1	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAAGTCCTAATGCAT	8	True	NA	-7	True	NA	NA	NA	151051233	151052732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151051320_151051809_151051902_151051982_151052063_151052165
transcript_131902.known	chr7	+	4119	23	FSM	ENSG00000164889.15	ENST00000413384.7	4119	23	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_2	87.1355930159882	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	-22	True	NA	7	True	AGTAAA	-16	NA	151059588	151076523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151059763_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_131903.known	chr7	+	3947	22	FSM	ENSG00000164889.15	ENST00000392826.6	3947	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	133.001219028393	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATCTGTGGCCTTTTGT	970	False	NA	6	True	AGTAAA	-15	NA	151062546	151076522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151062664_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_131909.known	chr7	-	1122	12	FSM	ENSG00000164885.13	ENST00000485972.6	1122	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	50.5493785265604	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGATGTGGTGGTC	13	True	NA	-5	True	CATAAA	-18	NA	151057897	151053814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_131910.known	chr7	-	783	11	FSM	ENSG00000164885.13	ENST00000297518.4	783	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.0173507275901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCGGGACCCCCGGCCTC	4139	False	NA	NA	False	NA	NA	NA	151057848	151054008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_131911.known	chr7	+	4925	23	FSM	ENSG00000164889.15	ENST00000485713.5	4925	23	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_1	132.278264488911	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGGCCTTTTGTCTTT	6986	False	NA	10	True	AGTAAA	-19	NA	151058211	151076526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151059189_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_131912.known	chr7	+	442	2	FSM	ENSG00000164889.15	ENST00000469467.1	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_1	0	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGTGGCCTTTTGTCT	1545	False	NA	8	True	AGTAAA	-17	NA	151075982	151076524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151076187_151076286
transcript_131914.known	chr7	-	1402	9	FSM	ENSG00000164896.21	ENST00000353841.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	146.428310104296	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	1	True	NA	-40	True	ATTAAA	-14	NA	151080842	151076625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151080684
transcript_131925.known	chr7	-	1794	10	FSM	ENSG00000164896.21	ENST00000297532.11	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_9	49.9164734430193	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	0	True	NA	-38	True	ATTAAA	-16	NA	151080809	151076623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_131926.known	chr7	-	1764	10	FSM	ENSG00000164896.21	ENST00000482571.2	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	136.656729539365	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	8639	False	NA	-40	True	ATTAAA	-14	NA	151080862	151076625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151079499_151079923_151080684
transcript_131927.known	chr7	-	1826	9	FSM	ENSG00000164896.21	ENST00000482806.5	1826	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_8	52.7802046225666	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAAGTTCCTTTCCTTC	19	True	NA	-60	True	NA	NA	NA	151080790	151076645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_131929.nnic	chr7	+	1107	3	NNC	ENSG00000133612.19	novel	604	5	NA	NA	0	-12557	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0.5	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAGAGTGCACATTTAT	-3	True	NA	4	True	AATAAA	-13	NA	151085866	151105125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_151086061_151086921_151087073_151104363
transcript_131932.known	chr7	-	4527	15	FSM	ENSG00000033050.9	ENST00000287844.7	4527	15	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_14	32.7206013866194	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCTTGTTTTGGATT	10	True	NA	-2	True	AATACA	-15	NA	151227205	151211483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151227162
transcript_131941.known	chr7	+	3107	15	FSM	ENSG00000013374.17	ENST00000413040.7	3107	15	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_12	92.4201806745603	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	-25	True	NA	16	True	AATAAA	-23	NA	151341771	151378449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374202_151375847_151375944_151376633_151376812_151377046
transcript_131943.known	chr7	+	3109	15	FSM	ENSG00000013374.17	ENST00000568733.6	3109	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	110.124234112095	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	15	True	NA	16	True	AATAAA	-23	NA	151341811	151378449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_131956.known	chr7	+	1703	9	FSM	ENSG00000013374.17	ENST00000468404.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_8	107.314301819469	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	7	True	NA	31	True	AATAAA	-28	NA	151341803	151361249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_131957.known	chr7	+	3210	15	FSM	ENSG00000013374.17	ENST00000470229.6	3210	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	119.327110011403	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAATATATTCAAAAATT	15	True	NA	-2	True	AATAAA	-5	NA	151341811	151378431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_131959.nic	chr7	+	1822	9	NIC	ENSG00000013374.17	novel	1703	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_8	134.076412448275	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	7	True	NA	31	True	AATAAA	-28	NA	151341803	151361249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_131961.nic	chr7	+	1919	8	ISM	ENSG00000013374.17	ENST00000468404.5	1703	9	-72	0	-40	0	intron_retention	FALSE	canonical	3	312	junction_1	32.7326835353989	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	23	False	NA	31	True	AATAAA	-28	NA	151341731	151361249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140
transcript_131970.nic	chr7	+	833	5	FSM	ENSG00000243836.6	ENST00000690609.1	782	5	-51	0	31	0	multi-exon	FALSE	canonical	2	5	junction_1	13.5369863706809	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	NA	False	NA	31	True	AATAAA	-33	NA	151409191	151413048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151409383_151411227_151411313_151411669_151411793_151411966_151412071_151412718
transcript_131979.known	chr7	+	704	4	FSM	ENSG00000243836.6	ENST00000480632.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	15.195028426722	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	-18	True	NA	31	True	AATAAA	-33	NA	151409235	151413048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151409383_151411669_151411793_151411966_151412071_151412718
transcript_131985.known	chr7	+	767	7	FSM	ENSG00000013374.17	ENST00000483358.5	767	7	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_2	20.0748598998847	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCATGTCTGTTGGA	3548	False	NA	NA	False	AAGAAA	-14	NA	151345344	151360209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140
transcript_131986.known	chr7	+	1752	9	FSM	ENSG00000013374.17	ENST00000470316.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	179.947909129281	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTCCAAAGGTGACCA	3548	False	NA	19	True	AATAAA	-16	NA	151345344	151361237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151345467_151349072_151349241_151351423_151351483_151352092_151352194_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_131987.known	chr7	+	586	2	FSM	ENSG00000013374.17	ENST00000480714.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTAGTTTTATTTATTT	7870	False	NA	4	True	ATTAAA	-14	NA	151368829	151374624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151368888_151374096
transcript_131989.known	chr7	-	2367	4	FSM	ENSG00000127377.10	ENST00000476631.5	2367	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGGGCAGCTTGTA	NA	False	NA	NA	False	AAAACA	-15	NA	151440813	151428834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151430181_151436179_151436326_151437838_151438245_151440344
transcript_13199.known	chr1	-	6399	7	FSM	ENSG00000069275.13	ENST00000367142.5	6399	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	22.4623141184419	9406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACTTGCATTCAATT	14	True	NA	-3	True	AATAAA	-21	NA	205750182	205712821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_131990.known	chr7	-	1989	4	FSM	ENSG00000127377.10	ENST00000337323.3	1989	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGGCAGCTTGTAATT	NA	False	NA	NA	False	AAAACA	-18	NA	151440141	151428831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151430181_151436179_151436326_151437995_151438245_151439896
transcript_131994.nic	chr7	-	1218	4	NIC	ENSG00000127377.10	novel	872	5	NA	NA	-110	-228	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGGCTTCTGAGTGCTC	NA	False	NA	NA	False	GATAAA	-16	NA	151440923	151432041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_151432286_151436179_151436326_151437995_151438245_151440344
transcript_132000.known	chr7	-	1153	9	FSM	ENSG00000106615.10	ENST00000478470.5	1153	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	782.722172932389	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGAGTTCACTTCCATT	240	False	NA	NA	False	NA	NA	NA	151519851	151466952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151498088_151498181_151519459
transcript_132003.known	chr7	-	2046	8	FSM	ENSG00000106615.10	ENST00000262187.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_6	118.998199266087	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTGTTAATGAAAAAT	3	True	NA	-4	True	AATAAA	-19	NA	151519895	151466011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
transcript_132005.known	chr7	-	744	8	FSM	ENSG00000106615.10	ENST00000496004.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	629.095041649965	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGGAATATATTCT	NA	False	NA	NA	False	NA	NA	NA	151520120	151467100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519897
transcript_132013.known	chr7	-	3279	16	FSM	ENSG00000106617.15	ENST00000287878.9	3279	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	55.2140883792855	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTTGTTAAAGAAGTTA	3	True	NA	34	True	ATTAAA	-18	NA	151877115	151556126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068_151632139_151675419_151675638_151781151_151781432_151786469_151786542_151876506
transcript_132015.known	chr7	-	2318	12	FSM	ENSG00000106617.15	ENST00000418337.6	2318	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_11	18.8122520301606	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAAGAAGTTATTT	6	True	NA	37	True	ATTAAA	-21	NA	151632353	151556123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068
transcript_132018.known	chr7	-	1910	4	FSM	ENSG00000106617.15	ENST00000652572.1	1910	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	14.3527000944073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTACAAAAAAAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	151632203	151573366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151574950_151576370_151576453_151595344_151595455_151632068
transcript_132019.known	chr7	+	1064	2	FSM	ENSG00000239911.3	ENST00000467458.3	1076	2	6	6	6	0	multi-exon	FALSE	canonical	2	4	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGAGCCTTTTTTTAA	-17	True	NA	22	True	ATTAAA	-23	NA	151877464	151879223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151877867_151878561
transcript_132024.known	chr7	+	2739	12	FSM	ENSG00000178234.13	ENST00000430044.7	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_8	19.839438141871	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	-34	True	NA	11	True	AATAAA	-16	NA	152025673	152122340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_152025885_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_13204.known	chr1	-	3308	6	FSM	ENSG00000117280.13	ENST00000367139.8	3308	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	38.0809663742926	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGGTTATTGGCCT	-14	True	NA	-12	True	AATAAA	-19	NA	205775482	205767985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775272
transcript_132048.nnic	chr7	-	633	4	NNC	ENSG00000196584.3	novel	4771	3	NA	NA	-72	-11985	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	69.6850055607374	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGGTCTTTGTACTCT	NA	False	NA	NA	False	AATAAA	-35	NA	152676213	152656763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_152656884_152656974_152657233_152660700_152660783_152676040
transcript_13205.known	chr1	-	1723	6	FSM	ENSG00000117280.13	ENST00000235932.8	1723	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	34.8114923552553	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	19	True	NA	NA	False	NA	NA	NA	205775449	205769436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775373
transcript_132055.known	chr7	-	4771	3	FSM	ENSG00000196584.3	ENST00000359321.2	4771	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	10	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGATGTCTTTTGTTT	12	True	NA	-29	True	TATAAA	-1	NA	152676141	152644775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_152649364_152660700_152660783_152676040
transcript_132059.nnic	chr7	-	724	3	NNC	ENSG00000196584.3	novel	4771	3	NA	NA	-72	-11985	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	69	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAATGGTCTTTGTACTCT	NA	False	NA	NA	False	AATAAA	-35	NA	152676213	152656763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_152657233_152660700_152660783_152676040
transcript_132060.nnic	chr7	-	1499	2	NIC	ENSG00000196584.3	novel	4771	3	NA	NA	-25	-3212	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAATATTTCTTCACAA	-13	True	NA	-8	True	ATTAAA	-16	NA	152676166	152647990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_152649364_152676040
transcript_132066.known	chr7	+	2213	12	FSM	ENSG00000133627.18	ENST00000256001.13	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	50.8935041074063	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTGTAGTGTGGTGG	-28	True	NA	19	True	AATAAA	-26	NA	152759751	152855378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_132073.known	chr7	+	3768	26	FSM	ENSG00000130226.17	ENST00000332007.7	3768	26	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_14	6.07104603836933	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	154305109	154893451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_154305552_154446213_154446329_154474938_154475038_154540531_154540627_154566841_154566917_154637820_154637874_154669359_154669442_154727766_154727888_154769416_154769572_154772844_154772943_154794078_154794203_154795844_154795884_154801354_154801463_154803863_154803956_154804916_154804965_154806993_154807113_154853779_154853828_154867994_154868094_154872623_154872694_154875905_154876101_154880887_154880943_154885632_154885745_154887675_154887735_154889271_154889345_154889456_154889531_154892333
transcript_132074.known	chr7	-	3711	21	FSM	ENSG00000157212.19	ENST00000397192.5	3711	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	39.1860625733181	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTGAGTAATCCTTTAT	-16	True	NA	-7	True	AATAAA	-16	NA	155002972	154943690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_154944163_154946362_154946426_154946511_154946588_154946678_154946814_154947902_154948004_154954254_154954424_154955528_154955632_154957223_154957295_154959889_154959934_154960892_154961078_154961526_154961649_154962320_154962459_154963670_154963767_154967815_154967911_154968402_154969127_154975695_154976332_154983218_154983333_154991005_154991070_154993725_154993770_154998649_154998785_155002848
transcript_132075.nic	chr7	-	1325	4	ISM	ENSG00000157212.19	ENST00000397192.5	3711	21	3	46354	3	-13922	5prime_fragment	FALSE	canonical	3	117	junction_3	5.8878405775519	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGAAACTTATCC	-13	True	NA	NA	False	NA	NA	NA	155002969	154990044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_154991070_154993725_154993770_154998649_154998785_155002848
transcript_132076.known	chr7	+	1635	3	FSM	ENSG00000214106.9	ENST00000662567.1	1635	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTATTATTGAATATATA	5	True	NA	NA	False	NA	NA	NA	154928503	154931636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_154928768_154928955_154929025_154930334
transcript_132077.known	chr7	+	963	1	FSM	ENSG00000272760.1	ENST00000608064.1	963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGTACATGCGAGCCGCA	NA	False	NA	NA	False	ATTAAA	-18	NA	154951225	154952188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_154951200_154952200
transcript_132078.nnic	chr7	+	979	3	Genic_Genomic	ENSG00000273344.1	novel	2256	1	NA	NA	-17	-835	multi-exon	FALSE	canonical	0	0	junction_1	20.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGGTTGTTTTAGT	NA	False	NA	24	True	AATATA	-22	NA	155003430	155004868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_155003709_155003961_155004135_155004340
transcript_132080.known	chr7	+	2256	1	FSM	ENSG00000273344.1	ENST00000608317.1	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACCTGTGTGAGAGAACT	-12	True	NA	28	True	AATAAA	-38	NA	155003447	155005703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_155003400_155005700
transcript_132081.known	chr7	-	1624	1	FSM	ENSG00000273117.1	ENST00000609974.1	1624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCTCTGACTCTGT	1452	False	NA	-9	True	AATAAA	-16	NA	155297541	155295917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155295900_155297500
transcript_132082.known	chr7	+	1320	6	FSM	ENSG00000186480.13	ENST00000476756.1	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	180.156154488266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCCCACACTGCGATATA	116	False	NA	NA	False	AATGAA	-8	NA	155298560	155308960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155303824_155303896_155308240
transcript_132083.known	chr7	+	2908	6	FSM	ENSG00000186480.13	ENST00000340368.9	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	25.4950975679639	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	0	True	NA	17	True	ATTAAA	-14	NA	155297877	155310235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
transcript_132086.known	chr7	+	1404	6	FSM	ENSG00000184863.11	ENST00000287912.7	1404	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	18.4282391996631	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGAGTCTGTGGC	-2	True	NA	NA	False	AATAAA	-24	NA	155644450	155701183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155700772
transcript_132090.nnic	chr7	-	896	4	NNC	ENSG00000216895.9	novel	1356	3	NA	NA	-193	279	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.5848929700813	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGGTGCATACCTTT	116	False	NA	NA	False	AATAAA	-16	NA	155644599	155641636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_155641825_155642785_155642971_155643467_155643605_155644213
transcript_132096.nnic	chr7	-	518	3	NNC	ENSG00000216895.9	novel	597	2	NA	NA	0	279	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	13	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGGTGCATACCTTT	-6	True	NA	NA	False	AATAAA	-16	NA	155644406	155641636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_155641825_155643467_155643605_155644213
transcript_132098.known	chr7	-	1356	3	FSM	ENSG00000216895.9	ENST00000460022.6	1356	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	3.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCGTCTCAGTAATGAT	338	False	NA	-11	True	AATAAA	-16	NA	155644377	155641915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155642971_155643467_155643605_155644213
transcript_132103.nnic	chr7	-	585	3	NIC	ENSG00000216895.9	novel	1356	3	NA	NA	195	319	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	12	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTCCTTATCTATGAA	-4	True	NA	-11	True	AGTAAA	-13	NA	155644182	155642764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_155642971_155643467_155643605_155643940
transcript_132109.known	chr7	-	597	2	FSM	ENSG00000216895.9	ENST00000469539.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGGGTGACAGAGCG	-6	True	NA	NA	False	NA	NA	NA	155644406	155643200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155643605_155644213
transcript_132112.known	chr7	-	212	2	FSM	ENSG00000216895.9	ENST00000472015.2	212	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACGTATAATAAAATGCTG	NA	False	NA	NA	False	GATAAA	-4	NA	155645205	155643467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155643605_155645130
transcript_132115.nic	chr7	-	896	3	ISM	ENSG00000182648.14	ENST00000661595.1	2149	5	-56	33317	-24	0	5prime_fragment	FALSE	canonical	1	4	junction_1	1	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	568	False	NA	2	True	AATAAA	-36	NA	156640623	156472096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_156472712_156605187_156605381_156640535
transcript_132116.known	chr7	-	1709	2	FSM	ENSG00000182648.14	ENST00000664734.1	1709	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGACTCACCCTGAATT	-14	True	NA	NA	False	AATAAA	-18	NA	156640567	156619945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156621623_156640535
transcript_132117.known	chr7	-	2718	4	FSM	ENSG00000182648.14	ENST00000661405.1	2718	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGGCCCTCATTTAAAT	-45	True	NA	NA	False	AAGAAA	-26	NA	156640598	156438048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156438996_156441229_156441381_156471154_156472712_156640535
transcript_132118.known	chr7	-	545	2	FSM	ENSG00000182648.14	ENST00000435354.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGACAATTATTGTGTT	-10	True	NA	-10	True	AGTAAA	-20	NA	156640563	156639431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156639949_156640535
transcript_132119.known	chr7	-	947	4	FSM	ENSG00000182648.14	ENST00000447933.7	957	4	10	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.29983164553722	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	-14	True	NA	2	True	AATAAA	-36	NA	156640567	156472096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156472712_156605187_156605381_156605657_156605765_156640535
transcript_132120.known	chr7	-	640	4	FSM	ENSG00000182648.14	ENST00000418309.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.92160768674447	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCATGCATTTTTATT	-28	True	NA	NA	False	ATTAAA	-17	NA	156640581	156603617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156603912_156605187_156605381_156605657_156605765_156640535
transcript_132121.known	chr7	-	7950	17	FSM	ENSG00000105983.23	ENST00000353442.10	7950	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	74.4691368538	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCACATCCCAATATATG	-13	True	NA	43	True	NA	NA	NA	156893183	156677790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
transcript_132122.known	chr7	-	565	2	FSM	ENSG00000105983.23	ENST00000609774.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCTCCAAATTAGTCTG	NA	False	NA	-9	True	AATAAA	-22	NA	156679133	156677842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156678351_156679076
transcript_132133.known	chr7	+	904	4	FSM	ENSG00000105982.17	ENST00000469382.1	904	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.90668171555645	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATTCTCAAGTACTAA	20	True	NA	NA	False	ATTAAA	-21	NA	156640748	156654921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_156640956_156643800_156643893_156644498_156644758_156654575
transcript_132137.known	chr7	+	1679	9	FSM	ENSG00000105982.17	ENST00000317955.10	1679	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.0178344238091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAATTTTAATGTCTTA	-10	True	NA	NA	False	AATAAA	-42	NA	156640773	156677130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_156640812_156643800_156643893_156644498_156644758_156654575_156654719_156657540_156657574_156658127_156658253_156658461_156658571_156675695_156675864_156676418
transcript_132138.known	chr7	+	6082	11	FSM	ENSG00000146909.8	ENST00000275820.4	6082	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_8	12.5554768925756	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGTAACAGTGAATGT	-12	True	NA	10	True	AATAAA	-20	NA	156949711	156973176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007_156963176_156963904_156964027_156966269_156966403_156966960_156967093_156969086_156969197_156969528
transcript_132139.nic	chr7	+	1392	6	ISM	ENSG00000146909.8	ENST00000275820.4	6082	11	722	9824	722	0	5prime_fragment	FALSE	canonical	3	60	junction_1	9.95991967839099	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTTGTATCTTTTTA	710	False	NA	16	True	NA	NA	NA	156950433	156963352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007
transcript_132140.known	chr7	+	1041	2	FSM	ENSG00000243479.3	ENST00000480284.1	1041	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATGCTTCAGTGTGTG	-23	True	NA	11	True	AATACA	-24	NA	157010804	157016426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_157011308_157015888
transcript_132146.known	chr7	+	2489	10	FSM	ENSG00000105993.15	ENST00000262177.9	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_9	681.616868596689	1403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGCCTGCTGTCCTTTGT	-6	True	NA	110	True	AATAAA	-21	NA	157337003	157417439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157410002_157416015
transcript_13215.known	chr1	-	1306	5	FSM	ENSG00000117280.13	ENST00000437324.6	1306	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	42.9614652915843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGGAGG	17	True	NA	NA	False	NA	NA	NA	205775451	205769702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205775272
transcript_132150.nic	chr7	-	2030	3	ISM	ENSG00000155093.19	ENST00000389416.8	4692	22	1018584	-5	52382	0	3prime_fragment	FALSE	canonical	3	20	junction_2	3	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTGGTCTTTATTTGG	7351	False	NA	1	True	ATTAAA	-15	NA	157569127	157539055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_157540786_157548945_157549020_157568901
transcript_132153.known	chr7	-	3957	29	FSM	ENSG00000146918.20	ENST00000409423.5	3957	29	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_28	207.350351741556	597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-15	True	NA	-5	True	AATAAA	-12	NA	158704804	158631313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
transcript_132159.known	chr7	+	3789	25	FSM	ENSG00000126870.16	ENST00000407559.8	3789	25	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	11.6054943884352	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	-40	True	NA	7	True	ATTAAA	-20	NA	158856557	158946189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_158856751_158869854_158869909_158871141_158871563_158876608_158876692_158879683_158879990_158884563_158884620_158887020_158887076_158891264_158891334_158901738_158901817_158902375_158902596_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
transcript_132173.known	chr8	-	370	3	FSM	ENSG00000223508.5	ENST00000606507.1	370	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGCCTCTGACGGTTTT	6	True	NA	NA	False	AATAAA	-13	NA	232231	230007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_230171_230803_230908_232128
transcript_132174.known	chr8	+	10386	11	FSM	ENSG00000147364.17	ENST00000382824.5	10386	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	18.5245782678041	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTACTCGTTACTT	0	True	NA	3	True	ATTAAA	-16	NA	406954	477967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_467719_467747_468714
transcript_132175.known	chr8	+	10356	10	FSM	ENSG00000147364.17	ENST00000350302.8	10356	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	2.58676593929396	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTACTCGTTACTT	3	True	NA	3	True	ATTAAA	-16	NA	406957	477967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_132179.nnic	chr8	+	1453	10	NNC	ENSG00000147364.17	novel	10356	10	NA	NA	107	-816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.7531122475108	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTCTCTCTATATATAT	110	False	NA	7	True	ATTAAA	-18	NA	407064	469055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_407183_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_132180.known	chr8	+	2360	9	FSM	ENSG00000147364.17	ENST00000352684.2	2360	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	12.9801531192818	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAGGACTAAAAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	406807	469871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_407067_413072_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_132185.nic	chr8	+	1111	7	ISM	ENSG00000147364.17	ENST00000382824.5	10386	11	-7	26189	-7	398	5prime_fragment	FALSE	canonical	3	42	junction_2	2.62466929133727	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTCTCTATTTATTTAG	-7	True	NA	NA	False	AGTAAA	-23	NA	406947	451778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268
transcript_132190.known	chr8	-	630	1	FSM	ENSG00000272293.1	ENST00000607549.1	630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACATCATTTTTGAGATA	NA	False	NA	0	True	AATAAA	-28	NA	451343	450713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_450700_451300
transcript_132191.known	chr8	-	3088	3	FSM	ENSG00000180190.13	ENST00000324079.11	3088	3	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	51	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTATTGGTTTGCATG	25	True	NA	-9	True	AATAAA	-19	NA	544834	489945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_492745_494493_494598_544649
transcript_132209.known	chr8	-	1798	6	FSM	ENSG00000104714.14	ENST00000262109.8	1798	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	23.8243572840906	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-21	True	NA	-55	True	ATTAAA	-18	NA	731224	664199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_664677_668597_668793_673288_674048_692477_692613_715860_716008_731139
transcript_132227.nic	chr8	-	599	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-49	9665	-49	0	5prime_fragment	FALSE	canonical	3	238	junction_3	10.2740233382816	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAACTGAAAAAGAAACAG	NA	False	NA	NA	False	AATAAA	-5	NA	731273	673864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_13223.known	chr1	-	1441	4	FSM	ENSG00000117280.13	ENST00000446390.6	1441	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	50.334437073991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	235	False	NA	NA	False	NA	NA	NA	205775233	205769717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205774832
transcript_132230.nic	chr8	-	478	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-49	9786	-49	-121	5prime_fragment	FALSE	canonical	3	238	junction_3	10.2740233382816	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATCCCAATAATGT	NA	False	NA	NA	False	CATAAA	-13	NA	731273	673985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_132240.known	chr8	-	1551	4	FSM	ENSG00000104714.14	ENST00000522706.5	1551	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	96.0034721594311	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAATGGAAAACATT	6	True	NA	-12	True	AATAAA	-17	NA	731197	614745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_615285_668597_668793_673288_674048_731139
transcript_132242.nnic	chr8	+	736	4	NNC	ENSG00000198010.13	novel	10418	15	NA	NA	8442	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTTCTGCCTGAC	8048	False	NA	NA	False	ATTAAA	-19	NA	891769	1032931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_891978_896646_896774_907911_907967_1032585
transcript_132243.nnic	chr8	+	400	3	NNC	ENSG00000198010.13	novel	10418	15	NA	NA	8495	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGCCTGTCTTTATTTC	8101	False	NA	NA	False	AATAAA	-14	NA	891822	910575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_891978_907911_907967_910385
transcript_132244.nnic	chr8	+	609	3	NNC	ENSG00000198010.13	novel	10418	15	NA	NA	8442	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTTCTGCCTGAC	8048	False	NA	NA	False	ATTAAA	-19	NA	891769	1032931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_891978_907911_907967_1032585
transcript_132246.known	chr8	+	6169	30	FSM	ENSG00000283239.1	ENST00000635855.1	6169	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.7028107086094	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAAATGCAGTAGGA	38	False	NA	16	True	AATAAA	-8	NA	1763887	1958627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763942_1770931_1771598_1843352_1843437_1857959_1858116_1859896_1860185_1864369_1864437_1866525_1866603_1869193_1869251_1876570_1876735_1880047_1880165_1882634_1882750_1885600_1885708_1893568_1893647_1894392_1894573_1896332_1896450_1898432_1898526_1903280_1903452_1905570_1905717_1909294_1909471_1922963_1923080_1923467_1923596_1923773_1923875_1925282_1925405_1926376_1926464_1928426_1928651_1929285_1929444_1933799_1933943_1945480_1945656_1952704_1952828_1956748
transcript_132249.nnic	chr8	+	1876	4	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-65	61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	75.9473501841901	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAATGCTTTATCT	3256	False	NA	15	True	AATAAA	-15	NA	1763694	1782742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_1763886_1770931_1771598_1780249_1780882_1782355
transcript_132250.nnic	chr8	+	2125	4	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-65	61	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	68.5143942702716	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAATGCTTTATCT	3256	False	NA	15	True	AATAAA	-15	NA	1763694	1782742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_1763886_1770931_1771598_1780249_1781131_1782355
transcript_132251.known	chr8	+	1958	4	FSM	ENSG00000182372.10	ENST00000635970.1	1958	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.9473501841901	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTTTACAGAACCCAAA	4	True	NA	6	True	AATAAA	-6	NA	1763814	1782681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763886_1770931_1771598_1780249_1781145_1782355
transcript_13226.nnic	chr1	-	717	3	NNC	ENSG00000117280.13	novel	3308	6	NA	NA	0	-2579	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	9.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAAATATACCACTT	-14	True	NA	NA	False	AATAAA	-23	NA	205775482	205774176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_205774531_205774832_205775087_205775373
transcript_132267.known	chr8	+	7084	3	FSM	ENSG00000182372.10	ENST00000331222.6	7084	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	15	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	8	True	NA	27	True	AATATA	-43	NA	1763788	1786570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763886_1770931_1771598_1780249
transcript_132271.known	chr8	+	1769	3	FSM	ENSG00000182372.10	ENST00000519254.2	1769	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	81.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCGCACCACT	1	True	NA	NA	False	NA	NA	NA	1763759	1781300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763812_1770931_1771598_1780249
transcript_132276.known	chr8	+	1897	3	FSM	ENSG00000182372.10	ENST00000637156.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	76	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTCTCTCAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	1763799	1781354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763926_1770931_1771598_1780249
transcript_132278.known	chr8	+	1807	3	FSM	ENSG00000182372.10	ENST00000635751.1	1807	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	82	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACCTGTAATCCCAGC	-4	True	NA	NA	False	ACTAAA	-28	NA	1763776	1781225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763942_1770931_1771598_1780249
transcript_13228.known	chr1	-	5017	11	FSM	ENSG00000133065.11	ENST00000367137.4	5017	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	12.6653069445632	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	-6	True	NA	-5	True	AATAAA	-16	NA	205813198	205789094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205812807
transcript_132289.known	chr8	-	579	2	FSM	ENSG00000253982.3	ENST00000518481.2	621	2	42	0	36	0	multi-exon	FALSE	canonical	3	264	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATGTGGGAAAACGTTG	1528	False	NA	-20	True	AATAAA	-27	NA	1763297	1762624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_1762929_1763022
transcript_132291.known	chr8	-	978	2	FSM	ENSG00000253982.3	ENST00000518822.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGACTGCCTTTGTAG	486	False	NA	NA	False	AAGAAA	-43	NA	1764339	1761989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_1762929_1764300
transcript_132292.known	chr8	-	917	2	FSM	ENSG00000253982.3	ENST00000517959.1	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCCTTGTTCATTCCTG	323	False	NA	NA	False	NA	NA	NA	1764502	1762080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_1762929_1764433
transcript_132293.known	chr8	+	1069	2	FSM	ENSG00000182372.10	ENST00000636605.1	1069	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	20	True	AATAAA	-22	NA	1799994	1801711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1800026_1800673
transcript_132296.nnic	chr8	+	643	2	NIC	ENSG00000176595.4	novel	6911	2	NA	NA	196	-30458	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCATGTCTTATGTGC	-8	True	NA	NA	False	AATAAA	-21	NA	1973872	1976478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_1973936_1975898
transcript_132297.known	chr8	+	497	1	FSM	ENSG00000270988.1	ENST00000605539.1	497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCTTACATTATAGTGA	905	False	NA	NA	False	AATAAA	-14	NA	1974817	1975314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1974800_1975300
transcript_132298.known	chr8	+	780	7	FSM	ENSG00000036448.10	ENST00000612167.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.7950549357115	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATGGCCCCGCCCCAG	8625	False	NA	NA	False	NA	NA	NA	2127734	2144910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_2127882_2129126_2129233_2140722_2140887_2141140_2141178_2142374_2142398_2143400_2143457_2144663
transcript_132301.nnic	chr8	-	1036	4	NNC	ENSG00000183117.20	novel	3989	18	NA	NA	40942	59394	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.94392028877595	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTATTTTAAGACGGGTT	NA	False	NA	NA	False	AATAAA	-38	NA	3243404	3218969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_3219443_3223728_3223868_3230039_3230232_3243172
transcript_132302.nnic	chr8	+	745	3	Antisense	novelGene_ENSG00000183117.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACACTCATGTGATAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	3241031	3308041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_3241349_3241448_3241566_3307730
transcript_132306.nnic	chr8	-	434	2	NIC	ENSG00000254007.2	novel	1216	3	NA	NA	15	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGCATATTTAGCCCCTAC	NA	False	NA	NA	False	AATAAA	-15	NA	5670125	5659729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_5659987_5669948
transcript_132307.known	chr8	+	3773	8	FSM	ENSG00000147316.15	ENST00000519480.6	3773	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	20.6318556942354	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTACTTGTTGCTGTTGT	614	False	NA	23	True	AATAAA	-31	NA	6406591	6447419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392
transcript_132309.nnic	chr8	-	497	3	NNC	ENSG00000246089.4	novel	2415	2	NA	NA	2	491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTTCCTTTGTGCTTA	9	True	NA	-5	True	ATTAAA	-19	NA	6406545	6404914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6405121_6405705_6405875_6406423
transcript_13231.nic	chr1	+	578	3	ISM	ENSG00000266028.8	ENST00000605610.5	3212	20	340	111495	104	-40861	5prime_fragment	FALSE	canonical	3	127	junction_2	47	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAAAGAATATCTTAT	2448	False	NA	NA	False	AATAAA	-17	NA	206206012	206343205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_206206038_206303280_206303474_206342845
transcript_132311.nnic	chr8	-	974	3	NIC	ENSG00000246089.4	novel	1017	3	NA	NA	-41	491	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	10	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTTCCTTTGTGCTTA	NA	False	NA	-5	True	ATTAAA	-19	NA	6407183	6404914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_6405121_6405705_6406372_6407081
transcript_132314.known	chr8	-	2413	2	FSM	ENSG00000246089.4	ENST00000500118.3	2415	2	2	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGATTTTGGAG	6	True	NA	NA	False	AATAAA	-25	NA	6406548	6403550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6405121_6405705
transcript_132315.nic	chr8	-	1016	2	ISM	ENSG00000246089.4	ENST00000523225.1	1017	3	565	-191	1	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	-23	True	NA	-16	True	AATAAA	-15	NA	6406577	6405405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_6406372_6406527
transcript_132316.nnic	chr8	-	1121	2	NIC	ENSG00000246089.4	novel	1017	3	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	NA	False	NA	-16	True	AATAAA	-15	NA	6407236	6405405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_6406372_6407081
transcript_132317.known	chr8	-	1137	1	FSM	ENSG00000246089.4	ENST00000606853.1	1137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	12	True	NA	-16	True	AATAAA	-15	NA	6406542	6405405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6405400_6406500
transcript_132318.known	chr8	-	5268	9	FSM	ENSG00000091879.14	ENST00000629816.3	5268	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.1224989991992	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCATTATTCTCATG	1	True	NA	NA	False	AATAAA	-37	NA	6563245	6499631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6503262_6508931_6509063_6513677_6513845_6514676_6514779_6519863_6519992_6521177_6521411_6527554_6527677_6532331_6532488_6562646
transcript_132319.known	chr8	-	5416	9	FSM	ENSG00000091879.14	ENST00000325203.9	5416	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.57071421427143	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTCACGATAACAAGAAAT	22	False	NA	NA	False	AATAAA	-18	NA	6563409	6499650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6503262_6508931_6509063_6513677_6513845_6514676_6514779_6519863_6519995_6521177_6521411_6527554_6527677_6532331_6532488_6562646
transcript_132325.known	chr8	-	3037	5	FSM	ENSG00000249898.9	ENST00000661193.1	3037	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.58602010819715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTCCACCTCAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	6708209	6617309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6619203_6620134_6620225_6627150_6627311_6634594_6635420_6708140
transcript_132329.nic	chr8	-	881	4	NIC	ENSG00000249898.9	novel	3037	5	NA	NA	-36	-217	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGAAATAGCTTGTTC	3	True	NA	NA	False	TTTAAA	-12	NA	6708260	6618691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_6619203_6620134_6620225_6627150_6627311_6708140
transcript_13233.known	chr1	+	6884	23	FSM	ENSG00000266028.8	ENST00000573034.8	6884	23	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_21	67.2332961835316	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGTTCATATCCCTT	0	True	NA	8	True	AATAAA	-20	NA	206203540	206464436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206458622_206458948_206461036
transcript_132339.nnic	chr8	-	455	3	NNC	ENSG00000249898.9	novel	1198	3	NA	NA	-36	677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCAGAGAGGTTCCTAG	3	True	NA	NA	False	AATAAA	-20	NA	6708260	6625923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6626099_6627150_6627311_6708140
transcript_132340.known	chr8	-	1198	3	FSM	ENSG00000249898.9	ENST00000527490.2	1198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGGCGGAGGCTA	-16	True	NA	NA	False	AAAACA	-45	NA	6708224	6627021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6627311_6634594_6635420_6708140
transcript_132341.nic	chr8	-	832	2	FSM	ENSG00000249898.9	ENST00000692160.1	787	2	-43	-2	-36	2	multi-exon	FALSE	canonical	1	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTAAAGGTAACATTTT	3	True	NA	-36	True	AATATA	-17	NA	6708260	6626598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6627311_6708140
transcript_132342.known	chr8	-	3024	2	FSM	ENSG00000249898.9	ENST00000670222.1	3024	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTTATCTTGTATA	-8	True	NA	NA	False	NA	NA	NA	6708216	6667292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6670241_6708140
transcript_132343.nnic	chr8	-	1254	2	NNC	ENSG00000249898.9	novel	3652	5	NA	NA	-2	-6609	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATTGTATGTTTGTACT	-18	True	NA	NA	False	ATTAAA	-22	NA	6708226	6673901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6675070_6708140
transcript_132344.nnic	chr8	-	1239	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	-98	-20633	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATGCTTGAGTCTTC	731	False	NA	0	True	ATTAAA	-30	NA	6708322	6687925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6688983_6708140
transcript_132346.nnic	chr8	-	401	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	0	-21366	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTCTCTCTGTCAC	-9	True	NA	NA	False	NA	NA	NA	6708217	6688658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6688983_6708140
transcript_132347.known	chr8	+	5237	8	FSM	ENSG00000155189.12	ENST00000285518.11	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_7	59.7805510656625	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGATAAAAAGTTATTT	-10	True	NA	16	True	AATAAA	-22	NA	6708641	6761503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6708888_6724869_6724940_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
transcript_132354.known	chr8	+	2525	7	FSM	ENSG00000155189.12	ENST00000523234.5	2525	7	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_1	351.662440732903	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATACCAGTTGGATC	14	True	NA	-94	True	AATATA	-14	NA	6708665	6758885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6708888_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
transcript_132362.known	chr8	-	4773	7	FSM	ENSG00000275591.5	ENST00000618742.3	4773	7	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	4.87909372276815	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTGAGCACCTATCA	-11	True	NA	NA	False	AATAAA	-20	NA	6835524	6808516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6812340_6815806_6815919_6821868_6822039_6823520_6823731_6825164_6825350_6832716_6832901_6835435
transcript_132374.known	chr8	+	1129	3	FSM	ENSG00000245857.3	ENST00000500823.3	1129	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAAATTCTTATTTTC	10	False	NA	NA	False	TATAAA	-18	NA	6835534	6842457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6835618_6835965_6836222_6841667
transcript_132375.known	chr8	-	375	2	FSM	ENSG00000164825.4	ENST00000297439.4	375	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTTTGGGCCAAAATGA	0	True	NA	NA	False	AATAAA	-23	NA	6877936	6870591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6870827_6877796
transcript_132378.nnic	chr8	-	673	2	Genic_Genomic	ENSG00000284614.1	novel	218	1	NA	NA	-127	6190	multi-exon	FALSE	canonical	3	24	junction_1	0	39	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTGTAAAGAGAATGT	NA	False	NA	NA	False	AATAAA	-42	NA	7222057	7215522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_7215851_7221712
transcript_132379.known	chr8	+	1588	4	FSM	ENSG00000255251.2	ENST00000533250.2	1588	4	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_3	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGTGACTGCTGTGCT	NA	False	NA	NA	False	AATAAA	-21	NA	7539626	7542450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_7539882_7540644_7540707_7540951_7541020_7541247
transcript_132380.nnic	chr8	+	670	3	Genic_Genomic	ENSG00000284617.1	novel	218	1	NA	NA	-113	994	multi-exon	FALSE	canonical	0	0	junction_2	5.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGCAGTTATGG	NA	False	NA	NA	False	NA	NA	NA	7611359	7612684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_+_7611691_7611828_7611993_7612509
transcript_132381.nnic	chr8	+	538	2	Genic_Genomic	ENSG00000284617.1	novel	218	1	NA	NA	-147	992	multi-exon	FALSE	canonical	1	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGCAGTTAT	NA	False	NA	NA	False	NA	NA	NA	7611325	7612682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_+_7611691_7612509
transcript_132382.known	chr8	-	1587	4	FSM	ENSG00000255378.1	ENST00000528972.1	1587	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGTGACTGCTGTGCT	NA	False	NA	NA	False	AATAAA	-21	NA	7781413	7778590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_7779794_7780021_7780090_7780334_7780397_7781159
transcript_132390.nnic	chr8	+	967	4	Fusion	ENSG00000284603.1_ENSG00000284606.1	novel	3297	4	NA	NA	-137	12325	multi-exon	FALSE	canonical	2	9	junction_2	78.8514778273404	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8059321	8071999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr8_+_8059675_8065119_8065188_8065575_8065817_8071694
transcript_132401.nnic	chr8	+	1198	2	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-238	-119858	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	8059333	8060669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8059675_8059812
transcript_132404.nnic	chr8	+	1277	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-131	-51923	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCT	-8	True	NA	NA	False	NA	NA	NA	8065514	8128604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8065817_8127629
transcript_132406.nnic	chr8	+	535	2	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-257	-119859	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	8059314	8060668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8059675_8060493
transcript_132407.nnic	chr8	+	848	3	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-175	-108528	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	2.5	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	6093	False	NA	NA	False	AATAAA	-19	NA	8065470	8071999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8065817_8070775_8070973_8071694
transcript_132408.nnic	chr8	+	629	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-153	-108528	at_least_one_novel_splicesite	FALSE	canonical	3	191	junction_1	0	375	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	6115	False	NA	NA	False	AATAAA	-19	NA	8065492	8071999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8065817_8071694
transcript_13241.known	chr1	-	2364	4	FSM	ENSG00000196550.11	ENST00000367128.8	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	47.7656315310031	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	31	False	NA	NA	False	AATAAA	-20	NA	206202839	206186178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873
transcript_132410.nnic	chr8	+	602	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-163	26722	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGTCAGATCTTGCG	6105	False	NA	6	True	AATAAA	-16	NA	8065482	8226695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8065817_8226427
transcript_13242.known	chr1	-	1774	4	FSM	ENSG00000196550.11	ENST00000341209.9	1774	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	80.3008232972877	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	424	False	NA	NA	False	AATAAA	-18	NA	206202446	206186255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201993
transcript_132432.known	chr8	-	4845	6	FSM	ENSG00000275342.5	ENST00000615670.5	4845	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1.93907194296653	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCTTTATCCTTAA	-6	True	NA	-18	True	ATTAAA	-23	NA	8386439	8317735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_8319303_8327709_8328462_8339477_8339636_8376246_8378079_8381417_8381835_8386320
transcript_132438.nnic	chr8	+	841	3	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGCTTGATTTTTA	372	False	NA	NA	False	AATACA	-16	NA	8892165	8927354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr8_+_8892582_8903495_8903557_8926990
transcript_132440.known	chr8	-	6399	3	FSM	ENSG00000147324.11	ENST00000276282.7	6399	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	12.5	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTATTCCCAGAACTT	-27	True	NA	-29	True	AATAAA	-21	NA	8893630	8783353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_8786056_8797364_8797492_8890060
transcript_132442.known	chr8	-	286	1	FSM	ENSG00000270966.1	ENST00000603391.1	286	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCTATCACCTTACTA	NA	False	NA	NA	False	NA	NA	NA	8934006	8933720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_8933700_8934000
transcript_132444.known	chr8	+	4521	7	FSM	ENSG00000104626.15	ENST00000250263.8	4521	7	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	19.0408916691303	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	-17	True	NA	31	True	AATAAA	-14	NA	9002896	9033338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791
transcript_132446.nnic	chr8	+	714	5	NNC	ENSG00000104626.15	novel	392	3	NA	NA	12816	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.76662979332984	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTCGTGTTGTACA	NA	False	NA	10	True	AATAAA	-23	NA	9062633	9100099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_9062785_9075823_9075918_9088459_9088570_9096742_9096861_9099858
transcript_132450.nnic	chr8	+	590	4	NNC	ENSG00000104626.15	novel	392	3	NA	NA	12816	-6106	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.32049379893857	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTATCTTTTTATTGT	NA	False	NA	5	True	AATAAA	-14	NA	9062633	9093993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_9062785_9075823_9075918_9088459_9088570_9093758
transcript_132451.nnic	chr8	+	596	4	NNC	ENSG00000104626.15	novel	392	3	NA	NA	12816	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	2.94392028877595	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATATTCGTGTTGTACA	NA	False	NA	10	True	AATAAA	-23	NA	9062633	9100099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_9062785_9075823_9075918_9088459_9088570_9099858
transcript_132454.nnic	chr8	+	483	3	NNC	ENSG00000104626.15	novel	392	3	NA	NA	12816	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCAAATATTCGTGTTGT	NA	False	NA	7	True	AATAAA	-20	NA	9062633	9100096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_9062785_9075823_9075918_9099858
transcript_132455.known	chr8	+	2107	8	FSM	ENSG00000104626.15	ENST00000519292.5	2107	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_7	63.163862052504	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	NA	False	NA	31	True	AATAAA	-14	NA	9002843	9033338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791_9030082_9032548
transcript_132456.nnic	chr8	+	365	2	NNC	ENSG00000104626.15	novel	392	3	NA	NA	12838	-6105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATCTTTTTATTGTG	NA	False	NA	6	True	AATAAA	-15	NA	9062655	9093994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_9062785_9093758
transcript_132459.nnic	chr8	-	546	2	NNC	ENSG00000173281.5	novel	5510	2	NA	NA	-55	1599	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAAAGAAAGAG	862	False	NA	NA	False	NA	NA	NA	9150713	9134655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_9135051_9150562
transcript_132460.known	chr8	-	5510	2	FSM	ENSG00000173281.5	ENST00000310455.4	5510	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTGTCCTTCTATTC	2	True	NA	NA	False	AATAAA	-17	NA	9150658	9136254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9141669_9150562
transcript_132465.known	chr8	+	439	3	FSM	ENSG00000248538.9	ENST00000521718.3	550	3	104	7	8	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGGAAATCATAAGG	10	False	NA	NA	False	AATAAA	-20	NA	9151799	9156362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9151917_9154965_9155077_9156151
transcript_13247.known	chr1	-	676	4	FSM	ENSG00000196550.11	ENST00000367129.6	676	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.2616886740789	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGATTGAAGCCAGTGA	NA	False	NA	NA	False	NA	NA	NA	206204065	206187122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206203843
transcript_132471.nnic	chr8	-	369	2	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-1029	-2083	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAGAAAACCAACA	NA	False	NA	NA	False	NA	NA	NA	9183548	9182333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_9182516_9183361
transcript_132472.known	chr8	-	328	2	FSM	ENSG00000253252.2	ENST00000521298.2	328	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAGGAAGTCATCAAAAT	880	False	NA	-15	True	AATAAA	-25	NA	9182519	9180250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9180523_9182463
transcript_132474.known	chr8	-	2913	3	FSM	ENSG00000253230.10	ENST00000653424.1	2913	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	60	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	4887	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9900199_9900544_9900613_9900688
transcript_132475.known	chr8	-	2903	3	FSM	ENSG00000253230.10	ENST00000665174.1	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	54	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	4887	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9900199_9900554_9900613_9900688
transcript_132476.known	chr8	-	3001	3	FSM	ENSG00000253230.10	ENST00000519461.2	3001	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	45.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	4887	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9900287_9900544_9900613_9900688
transcript_132477.known	chr8	-	3064	2	FSM	ENSG00000253230.10	ENST00000669913.1	3064	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTTCCCAAGTCCCAT	4887	False	NA	-33	True	AATAAA	-3	NA	9903398	9900076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9900287_9900544
transcript_132480.nnic	chr8	+	866	7	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1294	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.2934263292726	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAATGCTTGTGTGAT	3138	False	NA	NA	False	AGTAAA	-16	NA	10057675	10428365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_10057784_10069487_10069627_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_132481.nnic	chr8	+	1386	7	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1294	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.2934263292726	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACTGCCTGACATCTC	3138	False	NA	NA	False	AATAAA	-18	NA	10057675	10428885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_10057784_10069487_10069627_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_132482.known	chr8	+	1512	6	FSM	ENSG00000175806.15	ENST00000317173.9	1512	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.06630035524124	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGACATCTCCTCTGT	-24	True	NA	NA	False	AATAAA	-24	NA	10054291	10428891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_10054659_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_132484.nnic	chr8	+	715	6	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1282	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7054733592095	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAATGCTTGTGTGAT	3150	False	NA	NA	False	AGTAAA	-16	NA	10057687	10428365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_10057784_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_132485.nnic	chr8	+	1235	6	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1282	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.7054733592095	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACTGCCTGACATCTC	3150	False	NA	NA	False	AATAAA	-18	NA	10057687	10428885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_10057784_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_132496.known	chr8	-	610	7	FSM	ENSG00000254093.9	ENST00000524114.5	610	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.8044052556015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAACAAGCCCCAGGTT	111	False	NA	NA	False	NA	NA	NA	10839771	10765822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839707
transcript_132497.known	chr8	-	1546	7	FSM	ENSG00000254093.9	ENST00000314787.8	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	30.6865877325366	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGATTCAGATTGTTCT	7	True	NA	-6	True	ATTAAA	-17	NA	10839875	10764960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_132498.known	chr8	-	1272	6	FSM	ENSG00000254093.9	ENST00000519088.5	1272	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	72.1470720126604	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTCAGCAAGAGAGTTT	6	True	NA	-8	True	AATAAA	-19	NA	10839876	10765158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_10765917_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_132499.nnic	chr8	+	1356	4	Antisense	novelGene_ENSG00000280294.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2.35702260395516	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGAGGATACGAACAACA	NA	False	NA	NA	False	AATAAA	-27	NA	10850636	10858107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_10850732_10856215_10856304_10856456_10856580_10857057
transcript_1325.known	chr1	+	456	2	FSM	ENSG00000230679.1	ENST00000442636.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTACTTGAATTTAA	171	False	NA	NA	False	ACTAAA	-39	NA	8878834	8879894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_8878961_8879564
transcript_132504.nnic	chr8	-	1453	4	NNC	ENSG00000171044.11	novel	728	3	NA	NA	447	628	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	7.25718035235908	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAGAAAAAGCCA	1479	False	NA	NA	False	ACTAAA	-17	NA	11200387	11111016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11113871_11114093_11195090_11195222_11200162
transcript_132512.nnic	chr8	-	590	4	NNC	ENSG00000171044.11	novel	728	3	NA	NA	447	-86	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	22.2161102706022	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	1479	False	NA	-10	True	ATTAAA	-21	NA	11200387	11111730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11114020_11114093_11195090_11195222_11200162
transcript_132517.nnic	chr8	-	1292	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	477	628	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAGAAAAAGCCA	1509	False	NA	NA	False	ACTAAA	-17	NA	11200357	11111016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11113871_11114093_11200162
transcript_132519.nnic	chr8	-	1158	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	456	622	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	14.5	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAGAAA	1488	False	NA	NA	False	ACTAAA	-11	NA	11200378	11111022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11114020_11114093_11200162
transcript_13252.known	chr1	-	629	2	FSM	ENSG00000196550.11	ENST00000468509.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTGTAGAACCTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	206204093	206203179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206203559_206203843
transcript_132521.nnic	chr8	-	698	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	357	-86	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	1.5	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	1389	False	NA	-10	True	ATTAAA	-21	NA	11200477	11111730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11113871_11114093_11200162
transcript_132523.nnic	chr8	-	470	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	477	-86	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	11.5	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	1509	False	NA	-10	True	ATTAAA	-21	NA	11200357	11111730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11113979_11114093_11200162
transcript_132524.nnic	chr8	-	549	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	357	-86	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	14.5	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	1389	False	NA	-10	True	ATTAAA	-21	NA	11200477	11111730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11114020_11114093_11200162
transcript_132528.known	chr8	+	7081	10	FSM	ENSG00000104643.10	ENST00000221086.8	7081	10	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	14.0773875241883	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGCTTATTTGAATT	-13	True	NA	20	True	AATAAA	-33	NA	11284815	11328146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11285071_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_13253.known	chr1	+	2493	21	FSM	ENSG00000263528.8	ENST00000578328.6	2493	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_19	7.98999374217527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	9	True	NA	NA	False	NA	NA	NA	206470494	206496274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493919_206493992_206496111
transcript_132532.known	chr8	+	1960	10	FSM	ENSG00000104643.10	ENST00000526292.1	1960	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	43.2203655699486	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCATTTGTGTTTCATG	265	False	NA	-1	True	AATAGA	-11	NA	11285093	11323057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11285317_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_132539.nnic	chr8	-	1354	2	Genic_Genomic	ENSG00000280273.2	novel	1588	1	NA	NA	-17	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACCAACTTTCCTTGG	NA	False	NA	-8	True	AATAAA	-37	NA	11285085	11283480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_11284603_11284853
transcript_13254.known	chr1	+	678	5	FSM	ENSG00000263528.8	ENST00000579827.6	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.12372435695795	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATGTTCACAGCAGCA	156	False	NA	5	True	ATTAAA	-17	NA	206470641	206475135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864
transcript_132540.nic	chr8	+	1605	9	NIC	ENSG00000154316.16	novel	1421	8	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.80277563773199	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGACTCGATTATTC	NA	False	NA	NA	False	ATTAAA	-17	NA	11347610	11366088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_11347706_11355068_11355179_11356104_11356292_11358135_11358179_11359213_11359285_11361385_11361536_11361634_11361808_11364719_11364990_11365582
transcript_132543.known	chr8	+	1421	8	FSM	ENSG00000154316.16	ENST00000534302.5	1421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16653584115759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGACTCGATTATTC	NA	False	NA	NA	False	ATTAAA	-17	NA	11347644	11366088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11347706_11355068_11355179_11356104_11356292_11358135_11358179_11359213_11359285_11361634_11361808_11364719_11364990_11365582
transcript_132548.known	chr8	-	1099	2	FSM	ENSG00000255020.1	ENST00000525867.1	1099	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCTTGCCCTTGAAT	4	True	NA	NA	False	AATAAA	-15	NA	11347502	11345747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11346641_11347296
transcript_132549.known	chr8	-	4067	3	FSM	ENSG00000154319.16	ENST00000284486.9	4067	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAAAATGCTTGTCC	-3	True	NA	-13	True	AATAAA	-37	NA	11466753	11421475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11424637_11444030_11444809_11466625
transcript_132552.known	chr8	+	2415	3	FSM	ENSG00000286985.2	ENST00000682432.1	2415	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATCTACCGACAGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	11633097	11649333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11633328_11643331_11643520_11647336
transcript_132564.nic	chr8	+	2344	6	NIC	ENSG00000136574.19	novel	3419	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	164.705069745895	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCGTCCCTTAGTGGTC	-7	True	NA	27	True	AATAAA	-19	NA	11704201	11760000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_11704305_11748915_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_132566.nnic	chr8	+	884	2	NIC	ENSG00000136574.19	novel	877	3	NA	NA	-25	-7099	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCAAAGACGTTCACAG	-2	True	NA	101	True	NA	NA	NA	11676933	11701261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_11677064_11700507
transcript_132568.nic	chr8	+	810	2	ISM	ENSG00000136574.19	ENST00000526974.1	832	3	-26	7125	-26	-7104	5prime_fragment	FALSE	canonical	3	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGTCAAAGACGTT	NA	False	NA	96	True	NA	NA	NA	11692599	11701256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_11692661_11700507
transcript_132570.known	chr8	+	2614	7	FSM	ENSG00000136574.19	ENST00000528712.5	2614	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	195.60454720913	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCGTCCCTTAGTGGTC	-1	True	NA	27	True	AATAAA	-19	NA	11676958	11760000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11677064_11700510_11700779_11748915_11749086_11750110_11750237_11755045_11755134_11756934_11757084_11758292
transcript_132571.known	chr8	+	2323	6	FSM	ENSG00000154328.16	ENST00000455213.6	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	63.8172390502754	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	-39	True	NA	12	True	AATAAA	-12	NA	11769698	11787340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11769792_11770173_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_132572.known	chr8	+	2226	5	FSM	ENSG00000154328.16	ENST00000436750.7	2226	5	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	47.1274866717927	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	NA	False	NA	17	True	AATAAA	-17	NA	11769638	11787345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11769792_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_132573.known	chr8	+	2699	5	FSM	ENSG00000154328.16	ENST00000284503.7	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	33.8045854877707	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	-28	True	NA	17	True	AATAAA	-17	NA	11769709	11787345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_132575.known	chr8	+	2016	4	FSM	ENSG00000154328.16	ENST00000403422.7	2016	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	84.040995287353	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	-29	True	NA	17	True	AATAAA	-17	NA	11769708	11787345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11769792_11779597_11779951_11783202_11783400_11785962
transcript_132577.known	chr8	+	1773	9	FSM	ENSG00000079459.13	ENST00000525607.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	1322.69818930851	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCATGGCAGAGCA	-17	True	NA	-97	True	NA	NA	NA	11802740	11838839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802932_11803321_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_132580.known	chr8	+	1596	8	FSM	ENSG00000079459.13	ENST00000525900.5	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	1025.20908768377	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	8	True	NA	-31	True	NA	NA	NA	11802765	11838905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802911_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_132596.known	chr8	+	932	6	FSM	ENSG00000079459.13	ENST00000529464.5	932	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	1235.38874853222	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTCGGAAAGGGCAAGCA	-12	True	NA	NA	False	NA	NA	NA	11802745	11831581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802932_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517
transcript_132606.known	chr8	+	1558	5	FSM	ENSG00000079459.13	ENST00000446331.6	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	1328.57084869419	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTTTTGACCTTTTA	5	False	NA	-74	True	TTTAAA	-29	NA	11802642	11839210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802911_11826078_11826216_11830243_11830421_11831517_11831671_11838387
transcript_132634.known	chr8	+	642	2	FSM	ENSG00000079459.13	ENST00000527045.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTTGTCCCCAGTA	26	True	NA	6	True	AATAAA	-3	NA	11802783	11803815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802932_11803321
transcript_132636.known	chr8	+	2035	8	FSM	ENSG00000079459.13	ENST00000220584.9	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	2415	junction_3	304.397766089043	4431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAAGTACAGTTCGCT	-17	True	NA	14	True	AATAAA	-19	NA	11802740	11839298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_132637.known	chr8	-	3835	11	FSM	ENSG00000164733.22	ENST00000678242.1	3835	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	214.834378068316	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	NA	False	NA	-39	True	NA	NA	NA	11868137	11842559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
transcript_132639.known	chr8	-	1553	12	FSM	ENSG00000164733.22	ENST00000526481.7	1553	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	214.34867709389	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGATTCATTCCATG	36	False	NA	-3	True	AATAAA	-19	NA	11868079	11842523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11842683_11844014_11844242_11845081_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_132640.known	chr8	-	1913	10	FSM	ENSG00000164733.22	ENST00000679214.1	1913	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	176.021954298496	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACTTGAAGTCTACTCT	36	False	NA	-21	True	AATAAA	-8	NA	11868079	11844328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847816_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_132641.known	chr8	-	3141	2	FSM	ENSG00000284610.1	ENST00000641966.1	3141	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAGAAGAAATATTTGA	NA	False	NA	NA	False	AATATA	-35	NA	12015193	12006187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_12008966_12014830
transcript_13266.known	chr1	-	2011	15	FSM	ENSG00000143486.16	ENST00000271764.7	2011	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_11	21.3369469728555	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-7	True	NA	-4	True	AATAAA	-19	NA	206612465	206591641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_132663.known	chr8	-	2145	6	FSM	ENSG00000186523.15	ENST00000340537.9	2145	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	17.9064234284795	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACAGATGATCTGTGG	NA	False	NA	NA	False	AATAAA	-29	NA	12194082	12182097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_132664.known	chr8	-	2254	6	FSM	ENSG00000186523.15	ENST00000534187.6	2254	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	23.9365828806035	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	12194105	12182109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193876
transcript_132667.nnic	chr8	-	2127	5	NNC	ENSG00000186523.15	novel	2145	6	NA	NA	0	183	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	38.0591644679701	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATCTTTCAAGGCTGG	NA	False	NA	NA	False	AAGAAA	-22	NA	12194127	12181912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_12183102_12183205_12183707_12185375_12185526_12186699_12186834_12193974
transcript_132681.known	chr8	+	1361	2	FSM	ENSG00000255495.1	ENST00000528514.1	1361	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATAGCTATTGTCTTTC	NA	False	NA	NA	False	GATAAA	-25	NA	12194466	12196280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_12195438_12195890
transcript_132685.known	chr8	-	885	7	NIC	ENSG00000145002.13	novel	2518	8	NA	NA	0	-134	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	22.8235988982164	1	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGGACTCACACATGAC	11	False	NA	NA	False	NA	NA	NA	12436343	12425894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_12425990_12427656_12427807_12428632_12428899_12428980_12429115_12432081_12432163_12434051_12434115_12436247
transcript_132696.nnic	chr8	-	792	4	NIC	ENSG00000145002.13	novel	1295	7	NA	NA	-12	147	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	32.0659043568433	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTGTATCAAGGATGA	NA	False	NA	NA	False	AATAAA	-1	NA	12436379	12425613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_12425990_12427656_12427807_12428980_12429115_12436247
transcript_132727.nic	chr8	-	990	4	Fusion	ENSG00000284663.1_ENSG00000283674.3	novel	1014	6	NA	NA	1	0	multi-exon	FALSE	canonical	3	82	junction_3	56.4052795007307	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	NA	False	NA	NA	False	AATAAA	-26	NA	12607659	12594984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr8_-_12595297_12601157_12601399_12601786_12601855_12607290
transcript_132756.nic	chr8	-	856	3	ISM	ENSG00000283674.3	ENST00000637678.1	1770	6	64025	0	4237	0	3prime_fragment	FALSE	canonical	2	9	junction_1	11.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTGTAAAGAGAATG	2	True	NA	NA	False	AATAAA	-41	NA	12601489	12594969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_12595297_12596017_12596215_12601157
transcript_132766.known	chr8	-	701	2	FSM	ENSG00000283674.3	ENST00000636990.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGTCCTGGCTGCA	5921	False	NA	1	True	TATAAA	-22	NA	12659651	12626391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_12626571_12659129
transcript_13277.nnic	chr1	-	1918	14	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_5	47.6862279003167	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	28	False	NA	-4	True	AATAAA	-19	NA	206612522	206591641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_132774.nnic	chr8	+	1764	5	Genic_Genomic	ENSG00000270154.1	novel	661	1	NA	NA	-39282	-2	multi-exon	FALSE	canonical	2	4	junction_4	26.1963737948595	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGTGTCATCAATTTG	NA	False	NA	1	True	ATTAAA	-14	NA	12437179	12477120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_+_12437711_12438163_12438512_12440968_12441062_12444755_12444895_12476467
transcript_132797.known	chr8	+	1420	1	FSM	ENSG00000164743.5	ENST00000297324.5	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGCTCTGACTTGTGCG	-13	True	NA	10	True	AATAAA	-22	NA	13566868	13568288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_13566900_13568300
transcript_132806.nnic	chr8	+	1478	11	NNC	ENSG00000104723.21	novel	1203	10	NA	NA	24004	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	148.061338640443	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTAACTTACTGAAAACT	NA	False	NA	16	True	AATAAA	-19	NA	15585622	15758277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_15585898_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15757790_15757856_15758029
transcript_132810.known	chr8	+	3683	10	FSM	ENSG00000104723.21	ENST00000382020.8	3683	10	0	0	0	0	multi-exon	TRUE	canonical	3	246	junction_9	47.0518495195447	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCTTACTGCAGTTT	0	True	NA	NA	False	NA	NA	NA	15540222	15766649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15764202
transcript_132836.known	chr8	-	1840	3	FSM	ENSG00000078579.9	ENST00000180166.6	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	3	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTTGGCTTCATTGC	-6	True	NA	NA	False	ATTAAA	-39	NA	17002345	16992180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_16993318_16995654_16995759_17001746
transcript_132839.known	chr8	+	5924	13	FSM	ENSG00000104219.13	ENST00000262096.13	5924	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_7	22.9871642927574	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAGCTGAATACT	-23	True	NA	14	True	AATGAA	-16	NA	17156481	17224799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17156854_17184788_17184816_17186330_17186426_17195503_17195625_17197581_17197652_17198380_17198414_17205654_17205776_17207959_17208093_17209931_17210059_17210387_17210481_17215236_17215350_17217171_17217247_17220255
transcript_132860.known	chr8	-	6890	7	FSM	ENSG00000198791.12	ENST00000361272.9	6890	7	0	0	0	0	multi-exon	TRUE	canonical	3	1101	junction_1	112.242916133813	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATACAGACTTT	9	True	NA	NA	False	AATAAA	-18	NA	17246857	17224965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_132864.known	chr8	-	1885	6	FSM	ENSG00000198791.12	ENST00000523917.5	1885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_3	114.621114983235	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTGTAGCAATGT	-12	True	NA	-67	True	ATTAAA	-17	NA	17246878	17231569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_132878.known	chr8	-	680	4	FSM	ENSG00000198791.12	ENST00000519918.5	680	4	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_2	134.962546244834	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGGTCATGTGATTTT	2498	False	NA	NA	False	TTTAAA	-36	NA	17245091	17234592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17234861_17237211_17237374_17242991_17243186_17245035
transcript_132881.nnic	chr8	-	1096	7	NNC	ENSG00000003987.14	novel	506	2	NA	NA	-19	-2257	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.86871442274192	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGCGAAGTACTCAGCT	-9	True	NA	NA	False	AATAAA	-28	NA	17413370	17340986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_17341273_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
transcript_132886.nic	chr8	-	1184	4	ISM	ENSG00000003987.14	ENST00000521857.5	2158	13	-43	58828	-19	12516	5prime_fragment	FALSE	canonical	3	20	junction_3	0.942809041582063	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAACCCACCATCCCAT	-9	True	NA	NA	False	NA	NA	NA	17413370	17360478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_17361275_17371036_17371200_17373117_17373241_17413268
transcript_132888.known	chr8	-	506	2	FSM	ENSG00000003987.14	ENST00000521177.1	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGGAATGTGTGTTTG	7	True	NA	NA	False	NA	NA	NA	17413528	17372994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17373241_17413268
transcript_132889.known	chr8	-	5110	14	FSM	ENSG00000003987.14	ENST00000180173.10	5110	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.34734496952147	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGATTATGTAGAAC	10	True	NA	-17	True	AATAAA	-19	NA	17413351	17296793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17300225_17302153_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
transcript_132894.known	chr8	+	1307	11	FSM	ENSG00000155975.10	ENST00000521829.5	1307	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	97.145046193823	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAAACTGGCATT	84	False	NA	NA	False	NA	NA	NA	17247122	17295052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17247370_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_132901.known	chr8	+	4519	12	FSM	ENSG00000155975.10	ENST00000324849.9	4519	12	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	23.3138840625633	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGTCATTTTTTAA	1	True	NA	12	True	AATAAA	-22	NA	17246957	17298024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_132902.known	chr8	+	2102	12	FSM	ENSG00000155975.10	ENST00000520140.5	2102	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	95.7665895258962	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAGCTAGTTTTTAATA	-23	True	NA	15	True	ATTAAA	-15	NA	17246933	17295277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17279721_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_132903.known	chr8	+	697	6	FSM	ENSG00000155975.10	ENST00000521976.1	697	6	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	20.9818969590454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGGATATTTTCTGTG	1653	False	NA	17	True	TATAAA	-18	NA	17276435	17286611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346
transcript_132904.known	chr8	-	3996	12	FSM	ENSG00000129422.15	ENST00000381861.7	3996	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	7.18699468220086	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTGCATCCTCTGACC	12	True	NA	-9	True	AATAAA	-17	NA	17722221	17643803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17646140_17646981_17647080_17649845_17649963_17653185_17653282_17653424_17653499_17654560_17654667_17655862_17656066_17675185_17675253_17684327_17684543_17713213_17713253_17715766_17715902_17721711
transcript_132905.known	chr8	-	1193	9	FSM	ENSG00000129422.15	ENST00000634613.1	1193	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	8.89434511361011	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTCCCCAAAGTCCACAG	-1	True	NA	NA	False	NA	NA	NA	17676493	17645925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17646140_17646981_17647080_17649845_17649963_17653185_17653282_17653424_17653499_17654560_17654667_17655862_17656066_17675185_17675253_17676275
transcript_132906.known	chr8	+	1508	6	FSM	ENSG00000104213.13	ENST00000251630.11	1508	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	3.37045990927054	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACTTAAAATACATCCA	-2	True	NA	32	True	AATAAA	-28	NA	17577215	17643144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17577308_17589467_17589766_17621050_17621203_17628486_17628781_17634073_17634214_17642612
transcript_13291.nnic	chr1	-	1537	12	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	57.1844919160998	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-13	True	NA	-4	True	AATAAA	-19	NA	206612471	206591641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_132919.known	chr8	+	2171	11	FSM	ENSG00000078674.19	ENST00000518537.5	2171	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	64.8818156342746	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACAGCCCTGAAATTGT	11	True	NA	NA	False	NA	NA	NA	17922998	17955955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969_17953187_17955469
transcript_132921.nic	chr8	+	1892	10	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-270	2832	-239	0	5prime_fragment	FALSE	canonical	3	77	junction_7	67.1782225147921	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	NA	False	NA	NA	False	AAGAAA	-5	NA	17922728	17953123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969
transcript_132925.nic	chr8	+	1775	9	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-299	74680	-239	0	5prime_fragment	FALSE	canonical	3	140	junction_6	40.6355755465577	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	NA	False	NA	NA	False	AAGAAA	-5	NA	17922728	17953123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_132933.nic	chr8	+	703	4	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-270	18765	-239	-131	5prime_fragment	FALSE	canonical	3	184	junction_2	25.3683967872539	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTGTAGAAAGTGATAA	NA	False	NA	NA	False	AATAGA	-25	NA	17922728	17937190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133
transcript_132937.known	chr8	+	6820	39	FSM	ENSG00000078674.19	ENST00000325083.13	8652	39	-148	1980	-128	-7	multi-exon	TRUE	canonical	3	125	junction_24	84.2035564549835	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATCTTTTTTGGAAA	-12	True	NA	NA	False	AATAAA	-16	NA	17922839	18027968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
transcript_132938.known	chr8	+	1426	8	FSM	ENSG00000078674.19	ENST00000523055.5	1426	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	85.3312871778492	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	22	False	NA	NA	False	AAGAAA	-5	NA	17923009	17953123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17923189_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_132940.known	chr8	-	2283	14	FSM	ENSG00000104763.20	ENST00000636171.1	2283	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	340.805016353336	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGGAAAGAGTGCCAG	815	False	NA	-50	True	AATAAA	-3	NA	18084142	18056465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064475_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_132942.known	chr8	-	1940	14	FSM	ENSG00000104763.20	ENST00000636033.1	1940	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	306.418729632871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGAAGTGTTCCCTTT	25	True	NA	NA	False	NA	NA	NA	18084074	18056879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083898
transcript_132943.known	chr8	-	1989	14	FSM	ENSG00000104763.20	ENST00000636920.1	1989	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	306.418729632871	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAAGGAAGTTGCTAAC	-21	True	NA	NA	False	NA	NA	NA	18084120	18056834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083940
transcript_132944.known	chr8	-	2218	14	FSM	ENSG00000104763.20	ENST00000637636.1	2218	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	323.469413605771	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGGAAGTGAACCCATAT	644	False	NA	NA	False	AATAAA	-21	NA	18084313	18056752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069873_18071299_18071391_18075540_18075588_18083980
transcript_132945.known	chr8	-	2512	14	FSM	ENSG00000104763.20	ENST00000381733.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	304.389796032972	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCAGTCAGCAGTCAT	NA	False	NA	-39	True	AATAAA	-14	NA	18084998	18056454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
transcript_132948.known	chr8	-	1975	13	FSM	ENSG00000104763.20	ENST00000636494.1	1975	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_11	273.542653590502	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAGTAGCATTCATGTA	-27	True	NA	NA	False	TTTAAA	-4	NA	18084126	18056723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18075540_18075588_18083980
transcript_132949.known	chr8	-	1774	13	FSM	ENSG00000104763.20	ENST00000636997.1	1774	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	307.80535877221	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAAAGCAATCTTTTAT	-1	True	NA	NA	False	NA	NA	NA	18084100	18056902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18071299_18071391_18075540_18075588_18083980
transcript_132953.known	chr8	-	2158	12	FSM	ENSG00000104763.20	ENST00000636701.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	239.112028102877	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCACTGGAAAGAGTG	815	False	NA	-54	True	NA	NA	NA	18084142	18056469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18075540_18075588_18083980
transcript_132959.known	chr8	-	918	5	FSM	ENSG00000104763.20	ENST00000518087.7	918	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	451.596335237566	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	26	True	NA	-5	True	AATAAA	-24	NA	18084073	18066762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
transcript_132961.known	chr8	-	929	5	FSM	ENSG00000104763.20	ENST00000637561.1	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	87.2267160908858	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	809	False	NA	-5	True	AATAAA	-24	NA	18084148	18066762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_132963.known	chr8	-	581	5	FSM	ENSG00000104763.20	ENST00000637792.1	581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	536.270920337846	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAGTTCACTTAGAAG	-3	True	NA	NA	False	AATGAA	-31	NA	18084960	18067221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069873_18071299_18071391_18075540_18075588_18084675
transcript_132964.known	chr8	-	685	5	FSM	ENSG00000104763.20	ENST00000636269.1	685	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	455.000274725192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACTGAACAATATGAAC	1773	False	NA	-39	True	TATAAA	-1	NA	18083184	18066901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083121
transcript_132969.known	chr8	+	451	4	FSM	ENSG00000245281.8	ENST00000505114.6	451	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	3.68178700572909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTTGTAAAATAAATGC	446	False	NA	NA	False	AATAAA	-21	NA	18084867	18088211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18084940_18086882_18086937_18087024_18087138_18087999
transcript_132971.known	chr8	+	646	4	FSM	ENSG00000245281.8	ENST00000517798.1	646	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCAATCATTCCTGCCT	18	False	NA	NA	False	AATAGA	-42	NA	18085048	18088041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18085486_18086882_18086937_18087024_18087138_18087999
transcript_132974.known	chr8	-	1634	4	FSM	ENSG00000104763.20	ENST00000637202.1	1634	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	482.108563154262	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACACAATGTGTA	22	True	NA	NA	False	TATAAA	-37	NA	18084077	18065895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069879_18075540_18075588_18083980
transcript_132975.known	chr8	-	1025	4	FSM	ENSG00000104763.20	ENST00000636715.1	1025	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	453.497764296829	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCAGTCTTTTTTTTTC	113	False	NA	NA	False	NA	NA	NA	18084844	18066576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069879_18075540_18075588_18084675
transcript_132977.known	chr8	+	2412	3	FSM	ENSG00000245281.8	ENST00000665050.1	2412	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCATTTGCTATCCTT	334	False	NA	NA	False	AATAAA	-3	NA	18084385	18097629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18084940_18086882_18086937_18095825
transcript_132979.known	chr8	+	2942	3	FSM	ENSG00000245281.8	ENST00000521775.6	2942	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTATCCTTCGATTTGTT	-11	True	NA	NA	False	AATAAA	-12	NA	18084410	18097638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18085486_18086882_18086937_18095825
transcript_132981.known	chr8	-	2328	14	FSM	ENSG00000104763.20	ENST00000636160.1	2328	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	293.836910849394	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAACAGTCACTGGA	-21	True	NA	-61	True	NA	NA	NA	18084120	18056476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071412_18075540_18075588_18083980
transcript_132982.known	chr8	-	699	6	FSM	ENSG00000104763.20	ENST00000637638.1	699	6	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	259.98230709031	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAAGAAATGTTGCAGG	21	True	NA	NA	False	ATTAAA	-24	NA	18084078	18064234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_132984.known	chr8	+	333	4	FSM	ENSG00000171428.15	ENST00000517574.5	333	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.42809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGACTTGGAAACATT	20	False	NA	NA	False	NA	NA	NA	18210133	18222098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18210181_18211192_18211343_18219410_18219490_18222041
transcript_132987.known	chr8	+	2162	4	FSM	ENSG00000171428.15	ENST00000518029.5	2162	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7.40870359029762	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	16	False	NA	NA	False	AATAAA	-31	NA	18210129	18223689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18210181_18212390_18212775_18219410_18219490_18222041
transcript_132988.known	chr8	+	1799	3	FSM	ENSG00000171428.15	ENST00000307719.9	1799	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	-5	True	NA	NA	False	AATAAA	-31	NA	18210108	18223689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18210181_18219410_18219490_18222041
transcript_132994.known	chr8	+	344	2	FSM	ENSG00000285624.2	ENST00000648666.1	344	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTGTCTGTCTCTTTTC	NA	False	NA	7	True	AATAAA	-17	NA	18387267	18388319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18387357_18388064
transcript_132995.known	chr8	+	1285	2	FSM	ENSG00000156006.5	ENST00000286479.4	1285	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTCTCTAAAGTTTA	-4	True	NA	10	True	AATAAA	-17	NA	18391281	18401218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18391346_18399997
transcript_132996.known	chr8	-	11704	16	FSM	ENSG00000156011.18	ENST00000327040.13	11704	16	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	4.71687278701566	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGGAATGTTTTTATT	26	True	NA	-2	True	AATAAA	-19	NA	19013703	18527302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18535959_18556208_18556353_18572527_18572673_18575127_18575286_18600363_18600435_18632612_18632807_18655641_18655686_18765448_18765539_18799294_18799354_18801269_18801383_18804521_18804603_18804703_18804899_18867673_18868070_18871625_18872734_18936033_18936143_19013562
transcript_132998.known	chr8	+	1984	10	FSM	ENSG00000104611.12	ENST00000519207.5	1984	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	12.737618049708	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTGTACTTGAAAACG	15	False	NA	NA	False	AATAAA	-31	NA	19313975	19394953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_1330.known	chr1	-	1781	12	FSM	ENSG00000074800.16	ENST00000234590.10	1781	12	0	0	0	0	multi-exon	FALSE	canonical	3	12558	junction_8	1320.48302582336	80009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTGCCTGTGTATGT	1	True	NA	-24	True	AATAAA	-25	NA	8878686	8860999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
transcript_133003.nic	chr8	+	3149	9	NIC	ENSG00000104611.12	novel	1984	10	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	11.7891634563272	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTACAAGCTTGTTG	-10	True	NA	8	True	AATAAA	-18	NA	19313994	19396218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_13301.nic	chr1	-	1127	2	FSM	ENSG00000237605.3	ENST00000688109.1	1138	2	-4	15	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATTTTTTAAAGTTTA	231	False	NA	NA	False	AATAAA	-15	NA	206635437	206634198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206634984_206635095
transcript_133010.known	chr8	+	2517	17	FSM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_15	39.9029584586156	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	-15	True	NA	18	True	AATAAA	-20	NA	19817415	19852067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
transcript_133015.nic	chr8	+	975	7	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	4	28002	4	-427	5prime_fragment	FALSE	canonical	3	319	junction_3	34.1601619824419	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCTATTGATTCTTT	-11	True	NA	17	True	AATAAA	-14	NA	19817419	19824065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872
transcript_133017.known	chr8	+	3565	10	FSM	ENSG00000175445.17	ENST00000650287.1	3565	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	4.49691252107735	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATTATTTTGTATC	-2	True	NA	10	True	AATAAA	-24	NA	19939252	19967259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_19939529_19948179_19948341_19951768_19951949_19953309_19953422_19954119_19954354_19955840_19956084_19959259_19959381_19960900_19961084_19962114_19962220_19965309
transcript_13302.known	chr1	+	3091	10	FSM	ENSG00000162889.11	ENST00000367103.4	3091	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	5.71115434484284	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTTTTCTTTCTCTTT	-11	True	NA	21	True	ACTAAA	-15	NA	206684904	206734281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206685509_206728709_206728850_206729034_206729100_206729395_206729476_206729971_206730099_206730687_206730764_206731137_206731263_206731639_206731726_206731838_206731920_206732574
transcript_133022.known	chr8	+	2856	14	FSM	ENSG00000147416.11	ENST00000276390.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_8	77.7764205761176	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGTGACTCTCTATCTT	-6	True	NA	20	True	AATAAA	-23	NA	20197380	20221696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20212906_20214817_20214969_20216412_20216496_20217219_20217325_20218152_20218283_20220262
transcript_133029.known	chr8	+	670	6	FSM	ENSG00000147416.11	ENST00000519667.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	3	1077	junction_4	60.6728934533371	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAGTGTTATTGTTTGT	52	False	NA	NA	False	AATAAA	-17	NA	20197438	20211415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176
transcript_133035.known	chr8	+	4870	28	FSM	ENSG00000130227.17	ENST00000252512.14	4870	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.3505825769215	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	-18	True	NA	35	True	AATAAA	-20	NA	21919661	22006585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971942_21974669_21974775_21976355_21976522_21977769_21977844_21980083_21980204_21981730_21981878_21982639_21982813_21984645_21984840_21985585_21985692_21987140_21987277_21987783_21987858_21989002_21989084_21990343_21990408_21990810_21990920_21991867_21991975_21994362_21994452_21995491_21995600_21998754_21998838_21999090_21999306_21999535_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_133038.nnic	chr8	+	2046	6	NNC	ENSG00000130227.17	novel	4870	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	89.9399799866555	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	-11	True	NA	35	True	AATAAA	-20	NA	21919668	22006585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_21919721_21999659_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_13304.known	chr1	+	611	1	FSM	ENSG00000226945.1	ENST00000446057.1	611	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	19	False	NA	-9	True	AATACA	-36	NA	206907618	206908229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206907600_206908200
transcript_133044.nic	chr8	+	1054	9	NIC	ENSG00000158806.14	novel	1490	10	NA	NA	-28	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	0	True	NA	NA	False	AATAAA	-16	NA	22024096	22036897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_22024258_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_133046.known	chr8	+	1874	9	FSM	ENSG00000158806.14	ENST00000397940.5	1874	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.37036719067819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCTTCTCTTCCCTGG	-1	True	NA	NA	False	AATAAA	-15	NA	22024133	22036896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22024624_22024723_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_13305.known	chr1	-	5501	4	FSM	ENSG00000182795.13	ENST00000359470.6	5501	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.69967317119759	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGTCTTATTTTTTT	7	True	NA	-2	True	AATAAA	-13	NA	207032756	207018521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_207023481_207024886_207025065_207027493_207027680_207032578
transcript_133050.nnic	chr8	+	947	8	NIC	ENSG00000158806.14	novel	1490	10	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	4.03049599419025	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	16	False	NA	NA	False	AATAAA	-16	NA	22024112	22036897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_22024258_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_133056.known	chr8	+	497	4	FSM	ENSG00000158806.14	ENST00000520456.5	497	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.471404520791032	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	9335	False	NA	NA	False	AATAAA	-16	NA	22034107	22036897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22034276_22034509_22034545_22036492_22036527_22036637
transcript_133057.known	chr8	+	1100	9	FSM	ENSG00000158806.14	ENST00000289820.10	1100	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.56195171219375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	70	False	NA	NA	False	AATAAA	-16	NA	22024842	22036897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22025050_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_133062.known	chr8	+	1706	5	FSM	ENSG00000158815.11	ENST00000518533.5	1706	5	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	148.137393996249	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTTATCTGAAGCGG	9	False	NA	23	True	AATAAA	-14	NA	22042397	22048806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22042964_22043144_22043182_22046146_22046292_22046526_22046634_22047955
transcript_133063.known	chr8	+	1320	5	FSM	ENSG00000158815.11	ENST00000359441.4	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	104.564274491817	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTATCTGAAGCGGGGC	-2	True	NA	26	True	AATAAA	-17	NA	22042819	22048809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22042964_22043144_22043182_22046113_22046292_22046526_22046634_22047955
transcript_133064.nnic	chr8	-	1485	9	NNC	ENSG00000168476.12	novel	1666	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	86.9186940479434	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-6	True	NA	-19	True	AATAAA	-14	NA	22141951	22138019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450_22141660_22141884
transcript_133065.known	chr8	-	1666	8	FSM	ENSG00000168476.12	ENST00000306306.8	1666	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_6	29.732137494637	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-17	True	NA	-19	True	AATAAA	-14	NA	22141907	22138019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
transcript_133066.known	chr8	-	3099	6	FSM	ENSG00000168490.14	ENST00000321613.7	3099	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	7.63151361133557	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGCTGCTGTAACAAA	267	False	22232121	-5	True	AATAAA	-36	NA	22232101	22219703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22228787_22228910_22231795
transcript_133067.known	chr8	-	2976	5	FSM	ENSG00000168490.14	ENST00000454243.7	2976	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	4.58257569495584	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGCTGCTGTAACAAAA	269	False	22232121	-4	True	AATAAA	-37	NA	22232099	22219702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22231795
transcript_133069.known	chr8	+	5114	23	FSM	ENSG00000197181.12	ENST00000356766.11	5114	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_20	6.77989248799421	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAGTTGTGTTTGAAAT	-5	True	NA	NA	False	AATAAA	-17	NA	22275315	22357568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22352958_22353213_22354270_22354379_22355348
transcript_133077.known	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000381237.6	4663	9	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_8	153.775810841628	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	10	True	NA	18	True	AATAAA	-26	NA	22367277	22422736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_133078.known	chr8	+	2194	14	FSM	ENSG00000120910.15	ENST00000240139.10	2194	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	8.67697763212528	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTTCTGACTTGAAC	-24	True	NA	11	True	AATAAA	-21	NA	22441077	22541125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22539468_22539499_22540614
transcript_133079.known	chr8	+	1598	8	FSM	ENSG00000120910.15	ENST00000518852.5	1598	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	5.15078753637713	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTACGTATGTGTGTTTGT	NA	False	NA	NA	False	AGTAAA	-22	NA	22440818	22522813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654
transcript_13308.known	chr1	+	3494	15	FSM	ENSG00000123836.15	ENST00000367079.3	3494	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	10.2807527716126	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAATTAATTTTTAAG	45	False	NA	NA	False	AATAAA	-16	NA	207053310	207081024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207078953
transcript_133085.known	chr8	+	1490	9	NNC	ENSG00000120913.24	novel	2226	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	139.397812034479	1714	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATAAAGTAGATGTCC	1	True	NA	5	True	TATAAA	-14	NA	22580470	22594288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_22580698_22581378_22581531_22584820_22584891_22585016_22585089_22585089_22585163_22589298_22589375_22589595_22589742_22591550_22591669_22593732
transcript_133093.known	chr8	+	701	3	FSM	ENSG00000120913.24	ENST00000443561.3	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	117	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAGTGGGAAGGAGAG	-17	True	NA	-88	True	NA	NA	NA	22589282	22594195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22589375_22589595_22589742_22593732
transcript_133094.known	chr8	+	599	4	FSM	ENSG00000120913.24	ENST00000614502.4	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_3	32.8734948958377	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACAATGGTGGGCAGT	-18	True	NA	NA	False	NA	NA	NA	22589281	22593974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22589375_22589595_22589742_22591550_22591669_22593732
transcript_133095.known	chr8	+	4853	21	FSM	ENSG00000158941.17	ENST00000308511.9	3685	21	-125	-1043	-125	550	multi-exon	FALSE	canonical	3	848	junction_6	83.9858767888983	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGATGGGACAGGTCTC	2823	False	NA	NA	False	NA	NA	NA	22604631	22621514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22604843_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_133098.known	chr8	+	3980	21	FSM	ENSG00000158941.17	ENST00000389279.7	3980	21	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	215.011970596988	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGTGTGTCCTCCACA	-14	True	NA	66	True	AATAAA	-18	NA	22605037	22620471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22605419_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_1331.known	chr1	-	1782	12	FSM	ENSG00000074800.16	ENST00000647408.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5754.40358291294	8798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGTGTGCCTGTGTAT	-2	True	NA	-26	True	AATAAA	-23	NA	8878689	8861001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870824_8870884_8871890_8871987_8874823_8874918_8878579
transcript_13310.known	chr1	+	339	2	FSM	ENSG00000123836.15	ENST00000468857.1	339	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGTAGACTTAGTGA	17	True	NA	NA	False	NA	NA	NA	207053282	207054955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207053367_207054700
transcript_133105.known	chr8	-	1836	9	FSM	ENSG00000147439.14	ENST00000276416.11	1836	9	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_6	14.8492424049175	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACTTTATATACAAAG	-7	True	NA	NA	False	TTTAAA	-28	NA	22669121	22620417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754_22644804_22669043
transcript_133106.known	chr8	-	893	8	FSM	ENSG00000147439.14	ENST00000519335.5	893	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	64.0955918761906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAGGAGCCCTAGGCAG	35	False	NA	NA	False	AATGAA	-19	NA	22669079	22621269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22669043
transcript_133109.nic	chr8	-	1517	8	NIC	ENSG00000147439.14	novel	1836	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	60.7853365776413	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	NA	False	NA	17	True	AGTAAA	-19	NA	22669158	22620711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636921_22636963_22644754_22644804_22669043
transcript_13311.known	chr1	-	6396	2	FSM	ENSG00000180667.11	ENST00000315927.9	6396	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTATATTTTGGGA	0	True	NA	-10	True	AATAAA	-15	NA	207051208	207043848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_207049724_207050687
transcript_133110.known	chr8	-	1431	7	FSM	ENSG00000147439.14	ENST00000519513.5	1431	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.4662188085371	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	1	True	NA	17	True	AGTAAA	-19	NA	22669113	22620711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22644754_22644804_22669043
transcript_133114.known	chr8	+	542	5	FSM	ENSG00000158941.17	ENST00000523349.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	3	999	junction_4	46.4596599212693	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACGAGTGGCACTGT	667	False	NA	NA	False	NA	NA	NA	22605718	22607325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195
transcript_133117.known	chr8	-	1723	10	FSM	ENSG00000120889.13	ENST00000347739.3	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	53.9851374151108	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGACTTCACTTGATAC	6	True	NA	-16	True	NA	NA	NA	23069021	23022310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_133120.known	chr8	-	3998	9	FSM	ENSG00000120889.13	ENST00000276431.9	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	27.6043474836845	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-4	True	NA	NA	False	ATTAAA	-21	NA	23069031	23020132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_133125.nnic	chr8	+	690	4	Antisense	novelGene_ENSG00000120889.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAGGTAAATTATATATAA	NA	False	NA	18	True	AATAAA	-23	NA	23049905	23058874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_23049982_23052469_23052590_23054333_23054459_23058505
transcript_13313.known	chr1	+	7073	15	FSM	ENSG00000123836.15	ENST00000367080.8	7073	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	13.5075564641668	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGCTTCTGGGTTTT	9	True	NA	20	True	AATAAA	-23	NA	207053274	207077817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207072203
transcript_133133.known	chr8	+	1395	5	FSM	ENSG00000173535.15	ENST00000356864.4	1395	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGTGTGTTGGTTTTT	-1	True	NA	NA	False	NA	NA	NA	23102920	23117445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23103182_23111719_23111826_23114656_23114771_23115507_23115617_23116640
transcript_133135.known	chr8	+	1242	4	FSM	ENSG00000284948.1	ENST00000397703.6	1242	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.49443825784929	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCCTTGGAGATCGGT	6329	False	NA	13	True	AATAAA	-27	NA	23084354	23103558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23084546_23090147_23090289_23100636_23100685_23102696
transcript_133136.known	chr8	+	894	4	FSM	ENSG00000173535.15	ENST00000517558.1	894	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.3045763140937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCTTCCTTACCTGAAA	-1	True	NA	NA	False	NA	NA	NA	23102920	23117050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23103182_23114656_23114771_23115507_23115617_23116640
transcript_133138.known	chr8	-	3535	9	FSM	ENSG00000173530.6	ENST00000312584.4	3535	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	16.3152535990097	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGTTCGTTTATTT	1	True	NA	NA	False	AATAAA	-22	NA	23164027	23135587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23138004_23138187_23138261_23144449_23144636_23145057_23145090_23145667_23145922_23146960_23147073_23148437_23148552_23154873_23154980_23163785
transcript_133139.known	chr8	-	2690	10	FSM	ENSG00000104689.10	ENST00000221132.8	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.36597393430856	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGAATTGCTTCC	3	True	NA	NA	False	NA	NA	NA	23225102	23190451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23192014_23197131_23197205_23199265_23199449_23199885_23199918_23200504_23200601_23200686_23200761_23201807_23201920_23202647_23202762_23212115_23212213_23224755
transcript_13314.known	chr1	+	1691	10	FSM	ENSG00000196352.17	ENST00000367063.6	1691	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	37.1513421321791	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGATATATTGGTTT	297	False	NA	6	True	AATAAA	-17	NA	207321531	207340766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390
transcript_133140.nnic	chr8	+	1467	3	NNC	ENSG00000246582.3	novel	1239	2	NA	NA	-33	116	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	19	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCAAATCCTATAATAG	-29	True	NA	NA	False	NA	NA	NA	23225187	23228775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_23225626_23225804_23226124_23228065
transcript_133143.nnic	chr8	+	1332	3	NNC	ENSG00000246582.3	novel	1970	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCATTTGGTTCTT	-18	True	NA	23	True	AATAAA	-34	NA	23225198	23230926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_23225464_23228065_23228154_23229947
transcript_133147.known	chr8	+	1970	3	FSM	ENSG00000246582.3	ENST00000500853.1	1970	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	23.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTCCATTTGGTTCTT	4	True	NA	23	True	AATAAA	-34	NA	23225220	23230926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23226124_23228065_23228154_23229947
transcript_133149.known	chr8	+	3367	10	FSM	ENSG00000147457.14	ENST00000313219.8	3367	10	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_8	14.3716112484489	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTCCTCTTTAGGT	2454	False	NA	17	True	ATTAAA	-18	NA	23246090	23261999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23246995_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_13315.known	chr1	+	2590	10	FSM	ENSG00000196352.17	ENST00000367064.9	2590	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	13.3620062070238	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTTATCACAACTAGC	-3	True	NA	17	True	AATAAA	-19	NA	207321677	207360966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207359545
transcript_133151.known	chr8	+	2639	10	FSM	ENSG00000147457.14	ENST00000517325.5	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	96.5617566094682	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	-3	True	NA	10	True	ATTAAA	-11	NA	23246641	23261992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23246825_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_133154.known	chr8	+	1489	9	FSM	ENSG00000104679.12	ENST00000625275.3	1489	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	97.986526497269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCGTCCCGACGTAGCT	NA	False	NA	NA	False	NA	NA	NA	23287907	23296121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23289926_23290051_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_133158.known	chr8	+	1573	8	FSM	ENSG00000104679.12	ENST00000265806.12	1573	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	42.3421438150827	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	4	True	NA	16	True	AATAAA	-23	NA	23288107	23296279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_133168.known	chr8	-	3721	14	FSM	ENSG00000134013.16	ENST00000389131.8	3721	14	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_7	12.4933118201975	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGGCATAGGAGTTGT	0	True	NA	NA	False	NA	NA	NA	23404120	23296896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_133172.nnic	chr8	-	1416	6	NNC	ENSG00000134013.16	novel	975	4	NA	NA	-48	832	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	86.4513736154608	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCCCTTGGTTTCTTT	NA	False	NA	-1	True	ATTAAA	-25	NA	23404174	23330604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_23330751_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_133179.known	chr8	-	2063	13	FSM	ENSG00000197217.13	ENST00000417069.6	2063	13	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	37.9058592656421	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCACAGCTCCACGA	4	True	NA	NA	False	NA	NA	NA	23457695	23432925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_133180.known	chr8	-	5803	13	FSM	ENSG00000197217.13	ENST00000358689.9	5803	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	47.810098886695	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCGTAGACTGTGTGGG	-3	True	NA	-34	True	AATAAA	-20	NA	23457647	23429161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_133182.known	chr8	-	2026	12	FSM	ENSG00000197217.13	ENST00000523958.5	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	49.8525097389563	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTTGGTTATTCTC	5	True	NA	NA	False	AATACA	-20	NA	23457639	23434092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_133188.known	chr8	+	4672	4	FSM	ENSG00000147454.14	ENST00000519973.6	4672	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	69.1391511534689	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	-16	True	NA	22	True	AATAAA	-16	NA	23528955	23575463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23566107_23566337_23568321_23568379_23571334
transcript_133190.known	chr8	+	1889	4	FSM	ENSG00000147454.14	ENST00000290075.10	1889	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	78.2574100147853	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-16	True	NA	NA	False	AAGAAA	-23	NA	23528955	23572203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23566107_23566814_23568321_23568379_23571334
transcript_133192.known	chr8	+	3404	3	FSM	ENSG00000147454.14	ENST00000518881.5	3404	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	65	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-5	True	NA	NA	False	AGTAAA	-16	NA	23528966	23572221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23566107_23568379_23571334
transcript_133193.known	chr8	+	3018	2	FSM	ENSG00000147454.14	ENST00000520654.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTAATTCTGGC	-1	True	NA	NA	False	NA	NA	NA	23529052	23568965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23566107
transcript_133195.known	chr8	+	479	2	FSM	ENSG00000147454.14	ENST00000519192.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTAGTGAGAGTGTAA	3	True	NA	NA	False	AATAAA	-16	NA	23528974	23531925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23531684
transcript_133196.known	chr8	-	1748	4	FSM	ENSG00000159167.12	ENST00000524323.1	1748	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	255.045529704448	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGAATGGAATAACTAT	496	False	NA	NA	False	NA	NA	NA	23854311	23843913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854045
transcript_133197.known	chr8	-	3868	4	FSM	ENSG00000159167.12	ENST00000290271.7	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_2	21.9241115365405	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCCCCATGTCTT	1	True	NA	-23	True	AATAAA	-14	NA	23854806	23841928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854405
transcript_1332.known	chr1	-	1837	13	FSM	ENSG00000074800.16	ENST00000646370.2	1837	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5511.96422692391	6879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAATACTCCGTGTGCCTG	-3	True	NA	28	True	AATAAA	-18	NA	8878690	8861006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8870824_8870884_8871890_8871987_8874823_8874918_8878579
transcript_13320.known	chr1	+	663	4	FSM	ENSG00000197721.17	ENST00000531844.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCTGTGCAATCTGTA	19	False	NA	NA	False	AATAAA	-14	NA	207645112	207684036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207645331_207677388_207677569_207678197_207678298_207683871
transcript_133201.nic	chr8	-	1209	3	ISM	ENSG00000159167.12	ENST00000290271.7	3868	4	-52	8990	-52	-7005	5prime_fragment	FALSE	canonical	3	520	junction_1	23	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCCCTCTGGTTAAA	NA	False	NA	NA	False	ATTAAA	-14	NA	23854858	23850918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_23851532_23852241_23852385_23854405
transcript_133202.known	chr8	+	7019	23	FSM	ENSG00000042980.13	ENST00000265769.9	7019	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	3.76285674841481	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTCTGTAAAAAGATG	8	True	NA	NA	False	TATAAA	-13	NA	24294068	24359014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_24294196_24299973_24300078_24309893_24309971_24310162_24310242_24311360_24311438_24313387_24313581_24320235_24320308_24321217_24321290_24323833_24324004_24326553_24326636_24329984_24330116_24331149_24331328_24332659_24332750_24335445_24335642_24339465_24339569_24341597_24341758_24343100_24343182_24343505_24343585_24349863_24349973_24351231_24351311_24351986_24352053_24353769_24353833_24354383
transcript_133204.known	chr8	+	2085	14	FSM	ENSG00000042980.13	ENST00000437154.6	2085	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	3.41593897094993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTCTGGAAATGCAGAAA	-10	True	NA	NA	False	AAAAAG	-5	NA	24294110	24336120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_24294196_24299973_24300078_24309893_24309971_24310162_24310242_24311360_24311438_24313387_24313581_24320235_24320308_24321217_24321290_24323833_24324004_24326553_24326636_24329984_24330116_24331149_24331328_24332659_24332750_24335445
transcript_133210.nnic	chr8	+	2355	12	NIC	ENSG00000042980.13	novel	2085	14	NA	NA	-20	478	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	4.11809151014768	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAGAAAAATAA	-12	True	NA	NA	False	NA	NA	NA	24294048	24336598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_24294196_24299973_24300078_24310162_24310242_24311360_24311438_24320235_24320308_24321217_24321290_24323833_24324004_24326553_24326636_24329984_24330116_24331149_24331328_24332659_24332750_24335445
transcript_133212.known	chr8	+	3271	3	FSM	ENSG00000104722.14	ENST00000221166.10	3271	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	5.5	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	0	True	NA	12	True	AATAAA	-19	NA	24913760	24919093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_24914874_24915604_24915730_24917060
transcript_133219.known	chr8	-	2553	1	FSM	ENSG00000272163.1	ENST00000607058.1	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGACTTCTTGCTGTC	3657	False	NA	NA	False	ATTAAA	-24	NA	24914717	24912164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_24912200_24914700
transcript_133221.known	chr8	-	3584	4	FSM	ENSG00000277586.4	ENST00000610854.2	3584	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	7.31816613336672	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTAAAGTCTTTTTT	-1	True	NA	0	True	AATAAA	-18	NA	24956612	24950954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_24952953_24953475_24953796_24954180_24954306_24955471
transcript_133226.known	chr8	+	490	1	FSM	ENSG00000272157.1	ENST00000607735.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTATGTATGGAGAAGA	429	False	NA	6	True	AATAAA	-19	NA	24956620	24957110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_24956600_24957100
transcript_133227.known	chr8	-	1760	3	FSM	ENSG00000147437.10	ENST00000276414.4	1760	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGGCATACCTGTTAA	477	False	NA	NA	False	AATAAA	-16	NA	25424654	25419261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_25419461_25421572_25421669_25423189
transcript_133229.known	chr8	-	3367	12	FSM	ENSG00000104756.16	ENST00000221200.9	3367	12	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_11	10.2908127203968	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-11	True	NA	-4	True	ATTAAA	-20	NA	25458433	25427846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25458198
transcript_133234.known	chr8	+	3486	15	FSM	ENSG00000184661.14	ENST00000330560.8	3486	15	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	16.8457891547086	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAAACATTCTATTAA	-14	True	NA	25	True	AATAAA	-20	NA	25459232	25507911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_133239.known	chr8	+	3565	14	FSM	ENSG00000184661.14	ENST00000380665.3	3565	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_8	14.8459545622336	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTATGTAGAAATAAAT	-4	True	NA	-13	True	AATAAA	-23	NA	25459198	25507873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_25459474_25460239_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_133241.nic	chr8	+	2104	13	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-254	19284	-220	2792	5prime_fragment	TRUE	canonical	3	220	junction_2	17.5900461119982	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATAGGAGGAAGTCTCAA	-22	True	NA	NA	False	AATACA	-29	NA	25458978	25488627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551
transcript_133242.nic	chr8	+	2168	13	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-254	19220	-220	2856	5prime_fragment	FALSE	canonical	3	220	junction_2	17.5900461119982	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATGTGTTTAAAGATAT	-22	True	NA	NA	False	AAGAAA	-41	NA	25458978	25488691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551
transcript_133246.nic	chr8	+	1235	3	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-35	46630	-1	-790	5prime_fragment	FALSE	canonical	3	220	junction_2	25	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACACAAACAGA	-5	True	NA	NA	False	NA	NA	NA	25459197	25461281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_25459474_25460239_25460301_25460383
transcript_133248.nic	chr8	+	1536	2	ISM	ENSG00000184661.14	ENST00000380665.3	3565	14	-220	46593	-220	-791	5prime_fragment	FALSE	canonical	3	270	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACACAAACAG	-22	True	NA	NA	False	NA	NA	NA	25458978	25461280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_25459474_25460239
transcript_13325.known	chr1	+	3278	13	FSM	ENSG00000117335.20	ENST00000322875.8	3278	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	247.231448017619	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_133257.known	chr8	+	3923	10	FSM	ENSG00000221914.11	ENST00000380737.8	3923	10	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	36.9126429543665	972	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTGTCAAGTTGCT	-13	True	NA	13	True	AATAAA	-19	NA	26291507	26372680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
transcript_133266.known	chr8	-	3174	2	FSM	ENSG00000228451.4	ENST00000519902.1	3174	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCAGCAATTTGGTGTT	8348	False	NA	4	True	ATTAAA	-38	NA	26382953	26379258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_26381867_26382387
transcript_133268.known	chr8	+	3452	6	FSM	ENSG00000104765.16	ENST00000380629.7	3452	6	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_1	41.0297453075205	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTCAGTATATCATTT	-17	True	NA	24	True	ATTAAA	-16	NA	26383053	26413127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_13327.known	chr1	+	3320	13	FSM	ENSG00000117335.20	ENST00000367042.6	3320	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	247.993223473725	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	-30	True	NA	14	True	AATAAA	-15	NA	207752053	207795504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_133270.known	chr8	+	875	6	FSM	ENSG00000104765.16	ENST00000523949.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	324.345864780176	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGTGTTAAAATTTG	41	False	NA	NA	False	AATAAA	-19	NA	26383196	26505636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26505306
transcript_133271.known	chr8	+	739	6	FSM	ENSG00000104765.16	ENST00000520409.5	739	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	326.604347797147	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCACCCTGTTTTTACA	259	False	NA	NA	False	NA	NA	NA	26383414	26410509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26383497_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_133273.known	chr8	+	915	6	FSM	ENSG00000104765.16	ENST00000523515.5	915	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	326.604347797147	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCTTTTCCGCAAATG	222	False	NA	NA	False	NA	NA	NA	26383377	26410666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26383479_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_133277.known	chr8	+	502	4	FSM	ENSG00000104765.16	ENST00000521254.1	502	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	360.000925924735	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTACATATCCAATTC	4287	False	NA	NA	False	NA	NA	NA	26395616	26410519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26395709_26407999_26408104_26408226_26408377_26410363
transcript_133279.known	chr8	+	4603	14	FSM	ENSG00000092964.18	ENST00000311151.9	4603	14	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_5	63.1379629609944	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTGTATTGAGATGT	365	False	NA	21	True	AATAAA	-23	NA	26577842	26658178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26578294_26581968_26582058_26583798_26583984_26624142_26624308_26626616_26626679_26627214_26627296_26627871_26627941_26634779_26634901_26643438_26643596_26643949_26644092_26647629_26647801_26652256_26652437_26653231_26653398_26655614
transcript_133284.known	chr8	-	4730	3	FSM	ENSG00000240694.9	ENST00000522362.7	4730	3	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTTTTTCTGTTTCC	1	True	NA	-21	True	AATAAA	-16	NA	26513872	26504700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_26509244_26509547_26509678_26513815
transcript_133285.known	chr8	-	484	1	FSM	ENSG00000253813.1	ENST00000519826.1	484	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCAGGGAGGGCATTCC	NA	False	NA	NA	False	NA	NA	NA	26836300	26835816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_26835800_26836300
transcript_133286.known	chr8	-	2288	7	FSM	ENSG00000015592.17	ENST00000350889.9	2321	7	18	15	12	-15	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTCTTCTCACTAGT	33	False	NA	NA	False	AATAAA	-19	NA	27258386	27235322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27236906_27239970_27240163_27241053_27241263_27241676_27241758_27242396_27242493_27243710_27243802_27258350
transcript_133287.known	chr8	-	1250	6	FSM	ENSG00000015592.17	ENST00000265770.11	1250	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGTGTCCAGTTCTTT	-8	True	NA	-4	True	AATGAA	-8	NA	27258409	27236302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27236906_27239970_27240163_27241053_27241263_27242396_27242493_27243710_27243802_27258350
transcript_133288.known	chr8	-	4183	6	FSM	ENSG00000104228.13	ENST00000305364.9	4183	6	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_3	5.63560112144215	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTCCAATTTTTATTTA	-16	True	NA	-15	True	ACTAAA	-15	NA	27311272	27284885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27288128_27289161_27289281_27290155_27290179_27294079_27294311_27298463_27298560_27310800
transcript_133289.known	chr8	-	423	3	FSM	ENSG00000104228.13	ENST00000519219.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	6.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCAGGACCAGCTGGGAG	400	False	NA	NA	False	NA	NA	NA	27310856	27294039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27294311_27298463_27298560_27310800
transcript_133291.known	chr8	+	2776	19	FSM	ENSG00000120915.14	ENST00000521400.6	2776	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	9.15841379333106	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCAGCACACTTGCA	-25	True	NA	NA	False	NA	NA	NA	27491142	27545564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
transcript_133292.nnic	chr8	+	854	6	NNC	ENSG00000120915.14	novel	1923	14	NA	NA	-22	1837	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	27.463430230035	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATCTTTGTGTGTGT	NA	False	NA	41	True	NA	NA	NA	27491102	27508741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27508653
transcript_133294.nic	chr8	+	1031	6	ISM	ENSG00000120915.14	ENST00000520623.5	1923	14	-22	27155	-22	0	5prime_fragment	FALSE	canonical	3	52	junction_5	11.0562199688682	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27491102	27512100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835
transcript_133295.known	chr8	+	488	3	FSM	ENSG00000120915.14	ENST00000521924.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27505046	27512100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_27505147_27506871_27506995_27511835
transcript_133300.known	chr8	-	2098	9	FSM	ENSG00000120885.22	ENST00000405140.7	2098	9	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_8	646.110478169175	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACTTCAAGAATTGCT	3269	False	NA	-86	True	AATAAA	-36	NA	27611431	27597807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611145
transcript_133303.known	chr8	-	303	3	FSM	ENSG00000120885.22	ENST00000519472.5	303	3	0	0	0	0	multi-exon	FALSE	canonical	3	1891	junction_2	97	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAGGAGCCGCTACCGC	19	False	NA	17	True	AAGAAA	-5	NA	27614681	27608936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27609087_27610474_27610601_27614654
transcript_133308.known	chr8	+	3754	11	FSM	ENSG00000171320.15	ENST00000305188.13	3754	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	29.446391969136	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGCTTCCCTTAATC	7	True	NA	NA	False	NA	NA	NA	27774553	27805316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305
transcript_133312.known	chr8	-	3627	9	FSM	ENSG00000147419.19	ENST00000356537.9	3627	9	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_6	38.9228001947445	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTGTGAGAGAGATT	-20	True	NA	-11	True	AATAAA	-21	NA	27772640	27733315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_133318.known	chr8	-	3586	8	FSM	ENSG00000147419.19	ENST00000520486.5	3586	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	123.601235050959	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTGTGAGAGAGA	-33	True	NA	-13	True	AATAAA	-19	NA	27772653	27733317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_13332.known	chr1	+	3233	12	FSM	ENSG00000117335.20	ENST00000354848.5	3233	12	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_6	147.408523251787	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_133321.known	chr8	-	977	8	FSM	ENSG00000147419.19	ENST00000519509.5	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	148.729723365052	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTGAAACACTTTTCA	-20	True	NA	32	True	AAAACA	-2	NA	27772640	27735861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_133325.known	chr8	-	877	8	FSM	ENSG00000147419.19	ENST00000517979.1	877	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	201.127333004822	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCTGTGGCATTGAGA	7	True	NA	NA	False	AAAAAG	-43	NA	27772613	27748071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27764285_27764534_27765203_27765252_27772512
transcript_133327.known	chr8	-	1836	8	FSM	ENSG00000168078.10	ENST00000301905.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	14.8516473352766	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTCTCAGCATTATT	-14	True	NA	-24	True	AATAAA	-44	NA	27837817	27809623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837651
transcript_133333.known	chr8	-	1734	7	FSM	ENSG00000147419.19	ENST00000520202.5	1734	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	186.390867682823	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATTGATATATGAATTC	-19	True	NA	-15	True	AATAAA	-23	NA	27772639	27735051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_133334.known	chr8	-	460	7	FSM	ENSG00000147419.19	ENST00000524084.5	460	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	172.621615744443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTTTGGTTTCATCTG	-7	True	NA	NA	False	NA	NA	NA	27772627	27736162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_133338.nic	chr8	-	672	7	ISM	ENSG00000147419.19	ENST00000356537.9	3627	9	-16	14756	-3	0	5prime_fragment	FALSE	canonical	3	411	junction_4	42.2282159488442	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCTGTGGCATTGAGA	NA	False	NA	NA	False	AAAAAG	-43	NA	27772656	27748071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_133352.known	chr8	-	819	6	FSM	ENSG00000168078.10	ENST00000524266.1	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	45.6709973615642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGTGTGGCTTGCGTA	20	True	NA	NA	False	NA	NA	NA	27837783	27810293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27828104_27828199_27833055_27833134_27837651
transcript_133366.known	chr8	-	748	6	FSM	ENSG00000168078.10	ENST00000521226.2	748	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	40.9165003391052	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAGGAGTCTCTCTACCA	-6	True	NA	NA	False	ATTAAA	-29	NA	27837809	27820603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833041_27833134_27837651
transcript_13337.known	chr1	+	3281	12	FSM	ENSG00000117335.20	ENST00000367041.5	3281	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_11	278.243219605076	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_133371.known	chr8	+	3148	15	FSM	ENSG00000134014.17	ENST00000256398.13	3148	15	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	19.6418181543401	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCATGTGGTTTTCT	-13	True	NA	17	True	AATAAA	-19	NA	28093138	28191153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_133375.known	chr8	+	1914	14	FSM	ENSG00000134014.17	ENST00000524103.5	1914	14	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	49.2925093628833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCAGGTGGCCTATT	2880	False	NA	-92	True	NA	NA	NA	28093111	28189992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_133377.known	chr8	+	1924	13	FSM	ENSG00000134014.17	ENST00000519261.5	1924	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	66.8098462470582	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAGAGTAGTTTATT	-12	True	NA	10	True	AATAAA	-22	NA	28093139	28190094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_133381.nic	chr8	+	1082	7	NIC	ENSG00000134014.17	novel	879	8	NA	NA	-242	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	70.420167565833	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTATATTTGTCTT	2593	False	NA	NA	False	AATAAA	-17	NA	28092824	28112701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28112471
transcript_133384.known	chr8	+	1004	6	FSM	ENSG00000134014.17	ENST00000521938.5	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	23.4691286587295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAATACAAAAATTAG	-4	True	NA	NA	False	NA	NA	NA	28093147	28110913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369
transcript_133385.known	chr8	+	874	5	FSM	ENSG00000134014.17	ENST00000523357.5	874	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	88.1277481840992	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGCAAACTTAAGAGTA	NA	False	NA	3	True	AATAAA	-15	NA	28158579	28190087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28158634_28160228_28160457_28161996_28162079_28183193_28183265_28189648
transcript_133386.known	chr8	+	680	4	FSM	ENSG00000134014.17	ENST00000517975.1	680	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	83.9563378588339	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCAAACTTAAGAGTAGT	NA	False	NA	5	True	AATAAA	-17	NA	28158597	28190089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28158634_28160228_28160374_28162020_28162079_28189648
transcript_133387.known	chr8	+	1060	4	FSM	ENSG00000168081.9	ENST00000301908.8	1060	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTGGTTTGCTGTTTTT	-1	True	NA	NA	False	ATTAAA	-23	NA	28317267	28343351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28317317_28329134_28329284_28339039_28339492_28342941
transcript_133392.known	chr8	-	1254	9	FSM	ENSG00000214050.8	ENST00000380254.7	1254	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.9285218253543	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	15	True	NA	-49	True	AGTAAA	-16	NA	28490229	28428411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_133393.nic	chr8	-	1339	9	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29.4021151450027	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	4759	False	NA	-49	True	AGTAAA	-16	NA	28490293	28428411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483484_28490185
transcript_133400.known	chr8	-	1205	7	FSM	ENSG00000214050.8	ENST00000346498.6	1205	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	23.259406699226	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACGGTATTTCAGTAA	4774	False	NA	-85	True	NA	NA	NA	28490278	28428447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28483347_28483463_28490185
transcript_133408.nic	chr8	-	1026	4	NIC	ENSG00000214050.8	novel	398	3	NA	NA	-356	179	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	29.5108266385218	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTAGTCAGTGTATTTT	4418	False	NA	NA	False	AATAAA	-21	NA	28490634	28465019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_28465446_28473771_28473808_28483347_28483463_28490185
transcript_133412.nic	chr8	-	503	4	NIC	ENSG00000214050.8	novel	398	3	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	29.5108266385218	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTGTTGACATTTTGT	4762	False	NA	-2	True	AATAAA	-21	NA	28490290	28465198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_28465446_28473771_28473808_28483347_28483463_28490185
transcript_133414.nic	chr8	-	827	2	ISM	ENSG00000214050.8	ENST00000517673.5	607	5	-63	30471	-9	-17539	5prime_fragment	FALSE	canonical	3	76	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGTGT	4765	False	NA	NA	False	AATACA	-13	NA	28490287	28482737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_28483463_28490185
transcript_133415.known	chr8	-	398	3	FSM	ENSG00000214050.8	ENST00000519471.2	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	28.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTGTTGACATTTTGT	6782	False	NA	-2	True	AATAAA	-21	NA	28483462	28465198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28465446_28473771_28473808_28483347
transcript_133417.known	chr8	-	4797	10	FSM	ENSG00000186918.14	ENST00000344423.10	4797	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	26.4929527084068	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTGTGCCTGTCCTT	-14	True	NA	-3	True	AATAAA	-17	NA	28386460	28345589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386392
transcript_133419.known	chr8	+	13740	7	FSM	ENSG00000104290.11	ENST00000537916.2	13740	7	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_5	47.5444236711543	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGTACCTGATTAATTAT	-23	True	NA	21	True	AATAAA	-24	NA	28494204	28574267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28494344_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_133422.known	chr8	+	13770	8	FSM	ENSG00000104290.11	ENST00000240093.8	13770	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	41.8495848856597	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	-16	True	NA	12	True	AATAAA	-15	NA	28494211	28574258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_13343.known	chr1	+	1258	11	FSM	ENSG00000117335.20	ENST00000480003.5	1258	11	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_7	229.492832132073	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTGTTATTCTGTAGTT	39	False	NA	NA	False	ATTAAA	-8	NA	207752122	207793646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_133434.known	chr8	-	2549	17	FSM	ENSG00000104299.15	ENST00000521022.6	2549	17	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_7	23.7841859225831	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-20	True	NA	-5	True	AATAAA	-18	NA	28889969	28767660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_133438.known	chr8	-	2759	16	FSM	ENSG00000104299.15	ENST00000416984.6	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	47.421514104887	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	NA	False	NA	-5	True	AATAAA	-18	NA	28890242	28767660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28850212_28850274_28859435_28859564_28889873
transcript_13344.known	chr1	+	3188	11	FSM	ENSG00000117335.20	ENST00000357714.5	3188	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	192.788718549608	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-27	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_133443.known	chr8	-	1154	10	FSM	ENSG00000104299.15	ENST00000520983.5	1154	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	20.7602421546808	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTCTCACATTACTG	28	True	NA	NA	False	AATAAA	-9	NA	28889921	28793728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_133449.known	chr8	-	498	3	FSM	ENSG00000104299.15	ENST00000520831.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATTTTGCTCATGTGT	-29	True	NA	NA	False	NA	NA	NA	28889978	28850008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28850274_28859435_28859564_28889873
transcript_133450.nnic	chr8	-	857	2	NNC	ENSG00000104299.15	novel	2578	17	NA	NA	64	-35248	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTAGTTGTGTTTAC	-2	True	NA	NA	False	ATTAAA	-18	NA	28890178	28885256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_28885809_28889873
transcript_133451.known	chr8	-	929	9	FSM	ENSG00000104299.15	ENST00000523436.5	929	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	65.6637980549404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTCCGTGGTTTTTTTT	40	True	NA	NA	False	NA	NA	NA	28889909	28793806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28793988_28796543_28796656_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_133455.nnic	chr8	+	2523	11	NNC	ENSG00000147421.18	novel	2216	11	NA	NA	-22	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5.45893762558247	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGCTGAATGTCTAATG	-22	True	NA	NA	False	NA	NA	NA	28890372	29051947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29049289_29049395_29051017
transcript_133459.nnic	chr8	+	2520	11	NNC	ENSG00000147421.18	novel	1765	10	NA	NA	-22	30	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5.57584074378026	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGCTGAATGTCTAATG	-22	True	NA	NA	False	NA	NA	NA	28890372	29051947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289_29049395_29051017
transcript_133460.nnic	chr8	+	2465	11	NNC	ENSG00000147421.18	novel	1765	10	NA	NA	-22	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	5.57584074378026	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCATTAAAAAAAAAAAAAA	-22	True	NA	NA	False	ATTAAA	-21	NA	28890372	29051892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289_29049395_29051017
transcript_133462.known	chr8	+	3711	10	FSM	ENSG00000147421.18	ENST00000287701.15	3711	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	5.20920363099157	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGAAGTGAAGTGGAGC	0	True	NA	NA	False	AATATA	-22	NA	28890394	29053262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29051017
transcript_133463.nic	chr8	+	2385	10	NIC	ENSG00000147421.18	novel	2216	11	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	5.35412613473634	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTTGAGAGCATTGG	-22	True	NA	NA	False	ATTAAA	-17	NA	28890372	29051917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29051017
transcript_133473.nic	chr8	-	1750	16	ISM	ENSG00000197892.13	ENST00000521515.1	2765	18	-37	2877	-10	1557	5prime_fragment	FALSE	canonical	2	11	junction_5	4.79814779078576	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGAACGAGAGGATGAGGA	-5	False	NA	NA	False	AAAAAG	-10	NA	29263134	29148739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_29148768_29150296_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
transcript_133474.nic	chr8	-	1722	15	ISM	ENSG00000197892.13	ENST00000521515.1	2765	18	-37	4434	-10	0	5prime_fragment	FALSE	canonical	2	11	junction_4	4.91146098219174	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGATGTTGTTCATGTCC	-5	False	NA	NA	False	NA	NA	NA	29263134	29150296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
transcript_133477.known	chr8	-	8743	40	FSM	ENSG00000197892.13	ENST00000524189.6	8743	40	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_29	6.04171342565052	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTGAGGCCAGTCTT	1	True	NA	-9	True	AATAAA	-23	NA	29263070	29067277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_29070767_29071619_29072317_29075280_29075344_29092744_29092879_29099132_29099242_29108138_29108193_29109433_29109512_29109917_29110071_29113462_29113556_29116830_29117008_29118867_29118993_29122590_29122647_29123365_29123493_29124023_29124124_29126481_29126512_29127121_29127269_29130532_29130666_29132307_29132466_29134039_29134211_29140062_29140192_29140467_29140618_29142156_29142304_29146377_29146541_29147391_29147603_29148576_29148768_29150296_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
transcript_133478.known	chr8	-	5553	4	FSM	ENSG00000120875.9	ENST00000240100.7	5553	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	14.1656862405839	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGCTTGGTTAGACCT	-6	True	NA	-27	True	AATAAA	-15	NA	29350684	29333063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_29337412_29338281_29338502_29340097_29340244_29349845
transcript_133480.known	chr8	-	751	1	FSM	ENSG00000260253.1	ENST00000567818.1	751	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCCGTGCAGTGCCATC	NA	False	NA	NA	False	AATAAA	-23	NA	29353170	29352419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_29352400_29353200
transcript_133481.known	chr8	+	554	1	FSM	ENSG00000243844.1	ENST00000498256.1	554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	29632090	29632644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_29632100_29632600
transcript_133488.known	chr8	-	1803	5	FSM	ENSG00000133872.14	ENST00000520303.5	1803	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_4	315.488113880698	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAGAATCAATAAA	177	False	NA	-43	True	NA	NA	NA	30083153	30063129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30082846
transcript_133490.known	chr8	-	1981	6	FSM	ENSG00000133872.14	ENST00000518174.5	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	394.550072867817	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTCATTCTTTCTA	206	False	NA	-11	True	AATAAA	-13	NA	30083124	30063097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074052_30082846
transcript_133491.known	chr8	-	1741	6	FSM	ENSG00000133872.14	ENST00000521265.5	1741	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	297.31760795486	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAATCAATAAAAACA	382	False	NA	-39	True	NA	NA	NA	30082948	30063125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30063914_30066027_30066140_30066776_30066919_30069641_30070060_30073876_30074056_30082846
transcript_133502.known	chr8	+	3163	4	FSM	ENSG00000104660.19	ENST00000321250.13	3163	4	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	46.6499970227461	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTAGTCGTGTCCCAA	-43	True	NA	NA	False	NA	NA	NA	30095407	30108524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30105745
transcript_133504.known	chr8	+	1389	4	FSM	ENSG00000104660.19	ENST00000523116.5	1389	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	368.372094491426	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCATATCTTTTCCAGA	29	True	NA	NA	False	NA	NA	NA	30095479	30138348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30095529_30101897_30101974_30104299_30104487_30137271
transcript_133508.known	chr8	+	589	3	FSM	ENSG00000104660.19	ENST00000518001.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGAAGGATTAAAAGGAT	-41	True	NA	-11	True	NA	NA	NA	30095409	30106028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30095529_30104299_30104487_30105745
transcript_133512.known	chr8	-	396	1	FSM	ENSG00000241511.1	ENST00000492525.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	756	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTAATGCAGCATATAT	27	False	NA	NA	False	AAAACA	-35	NA	30117779	30117383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30117400_30117800
transcript_133513.known	chr8	-	403	1	FSM	ENSG00000271869.1	ENST00000607315.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGCGTCATTATGCCCT	1877	False	NA	-2	True	AATAAA	-19	NA	30156232	30155829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30155800_30156200
transcript_133514.known	chr8	+	1054	7	FSM	ENSG00000104671.8	ENST00000221114.8	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	21.9012937213003	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTGGATTTGTAGC	-3	True	NA	8	True	ATTAAA	-19	NA	30156368	30183639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30156407_30164110_30164176_30175084_30175191_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_133515.known	chr8	+	820	6	FSM	ENSG00000104671.8	ENST00000522141.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	135.222187528527	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGACAAGAAAAGACATAC	299	False	NA	-62	True	TATAAA	-38	NA	30156318	30183461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30156407_30164110_30164176_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_133516.known	chr8	+	1646	1	FSM	ENSG00000127589.4	ENST00000518096.1	1646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1685	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTGGAAAAAAAAAAAAAAAA	14	False	NA	82	True	AATAAA	-11	NA	30351872	30353518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30351900_30353500
transcript_133539.nic	chr8	+	2148	9	NIC	ENSG00000157110.16	novel	839	9	NA	NA	-60	-352	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	495.694320499035	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAATGTCATGATTACC	6272	False	NA	NA	False	NA	NA	NA	30442556	30571904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_13354.nic	chr1	+	689	5	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-90	32364	-21	1558	5prime_fragment	FALSE	canonical	3	577	junction_4	43.7864134178629	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACACACCTTTAGTG	NA	False	NA	NA	False	AATAAA	-4	NA	207752032	207761282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248
transcript_133540.nic	chr8	+	1001	9	NIC	ENSG00000157110.16	novel	839	9	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	495.694320499035	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGTAAGAAATAGCGT	6272	False	NA	12	True	AATAAA	-24	NA	30442556	30570757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_133550.known	chr8	+	780	7	FSM	ENSG00000157110.16	ENST00000519647.5	780	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	532.580093089815	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTTAATCAGAGCAA	-13	True	NA	-13	True	NA	NA	NA	30387207	30547492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30387325_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_133554.nic	chr8	+	937	7	NIC	ENSG00000157110.16	novel	1613	6	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	515.529716785453	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	6272	False	NA	17	True	AATAAA	-28	NA	30442556	30547522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_133559.known	chr8	+	453	4	FSM	ENSG00000157110.16	ENST00000523104.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	278.449277248119	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGTAAGAAATAGCGT	NA	False	NA	12	True	AATAAA	-24	NA	30556636	30570757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30556795_30558886_30558957_30566256_30566361_30570636
transcript_13356.known	chr1	+	408	4	FSM	ENSG00000117335.20	ENST00000493796.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	305.052272387683	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAATTCTTTTTTTT	-16	True	NA	NA	False	NA	NA	NA	207752067	207759724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752098_207757013_207757203_207757539_207757643_207759638
transcript_133561.known	chr8	+	1341	7	FSM	ENSG00000157110.16	ENST00000339877.8	1341	7	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_6	251.448912416728	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	87	False	NA	17	True	AATAAA	-28	NA	30384510	30547522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_133562.known	chr8	+	842	7	FSM	ENSG00000157110.16	ENST00000520161.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	526.65981008195	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTCAATAAAAATTTTAA	300	False	NA	-22	True	NA	NA	NA	30385202	30547483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30385391_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_133563.known	chr8	+	1613	6	FSM	ENSG00000157110.16	ENST00000520191.5	1613	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	544.698595555377	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCTGGGTGAAATAAACA	4	True	NA	NA	False	NA	NA	NA	30442616	30545591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493
transcript_133564.known	chr8	+	494	2	FSM	ENSG00000157110.16	ENST00000522099.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTAGACTGCAGCGTT	NA	False	NA	14	True	AATAAA	-25	NA	30545199	30547519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30545466_30547291
transcript_133565.nic	chr8	-	1047	4	NIC	ENSG00000254109.6	novel	1031	4	NA	NA	-100	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	43.1508980207828	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCCAGGACTTTGTCC	483	False	NA	NA	False	AATAAA	-24	NA	30384879	30382123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_30382616_30383127_30383363_30383543_30383698_30384713
transcript_133566.nic	chr8	-	722	3	NIC	ENSG00000254109.6	novel	909	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	46.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGACTTTGTCCATTGT	578	False	NA	NA	False	AATAAA	-29	NA	30384784	30382118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_30382616_30383543_30383698_30384713
transcript_133567.known	chr8	-	754	3	FSM	ENSG00000254109.6	ENST00000523643.5	754	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCCAGGACTTTGTCC	622	False	NA	NA	False	AATAAA	-24	NA	30384740	30382123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30382616_30383127_30383363_30384713
transcript_13358.nic	chr1	+	655	4	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-90	33922	-21	0	5prime_fragment	FALSE	canonical	3	579	junction_1	40.9416929574514	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAATTCTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	207752032	207759724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638
transcript_133581.known	chr8	+	702	8	FSM	ENSG00000104691.16	ENST00000615729.4	702	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.6647617959059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGGGAGAGCTCCCT	18	True	NA	-75	True	NA	NA	NA	30744189	30766394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30744278_30751506_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_133583.known	chr8	+	1624	8	FSM	ENSG00000104691.16	ENST00000380154.9	1624	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.2418631157217	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	2	True	NA	27	True	AATAAA	-38	NA	30744173	30767006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30744461_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_133586.nnic	chr8	+	1332	7	NIC	ENSG00000104691.16	novel	1451	8	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	16.4797855973108	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	-12	True	NA	27	True	AATAAA	-38	NA	30744159	30767006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_30744278_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_133590.known	chr8	+	1451	8	FSM	ENSG00000104691.16	ENST00000265616.10	1451	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	8.63311138842179	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	-8	True	NA	27	True	AATAAA	-38	NA	30744163	30767006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_133592.known	chr8	-	1946	7	FSM	ENSG00000104695.13	ENST00000221138.9	1946	7	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_5	22.3215142855497	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTTATTGTGTTGTG	-13	True	NA	-10	True	AATAAA	-21	NA	30812818	30785615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
transcript_1336.known	chr1	+	1114	4	FSM	ENSG00000234546.5	ENST00000664915.1	1114	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGGTGGAATGGACTG	-34	True	NA	12	True	AATAAA	-25	NA	9182164	9192094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9182317_9183632_9183808_9191039_9191125_9191392
transcript_133607.nic	chr8	-	1870	3	NIC	ENSG00000172733.12	novel	2693	2	NA	NA	175	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	7	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTGGATTCTTAATTA	582	False	NA	-4	True	AATAAA	-18	NA	31033181	30995801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_30996698_31031918_31032789_31033077
transcript_133608.known	chr8	+	7575	35	FSM	ENSG00000165392.11	ENST00000298139.7	7575	35	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_19	17.6535527267299	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCTTTGACCTTTT	-5	True	NA	23	True	ATTAAA	-27	NA	31033809	31176138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31085165_31085247_31087775_31087921_31088889_31088966_31090464_31090533_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
transcript_133612.nic	chr8	+	1830	12	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-72	88276	-50	2634	5prime_fragment	FALSE	canonical	3	118	junction_6	12.4741054102138	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGAAGATGATGA	587	False	NA	NA	False	ACTAAA	-1	NA	31033737	31087862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31085165_31085247_31087775
transcript_133613.nnic	chr8	+	1498	9	NNC	ENSG00000165392.11	novel	7575	35	NA	NA	-50	-7456	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	45.5706868502111	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACATGTTTTATTTGGG	587	False	NA	NA	False	ATTAAA	-22	NA	31033737	31077772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31077425
transcript_133618.nic	chr8	+	1475	8	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-72	99527	-50	-8617	5prime_fragment	FALSE	canonical	3	118	junction_6	9.50832073845356	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGATTCAAAGTTGTCA	587	False	NA	NA	False	AATAAA	-20	NA	31033737	31076611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172
transcript_13362.known	chr1	+	7826	9	FSM	ENSG00000117335.20	ENST00000469535.5	7826	9	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_8	126.657448951888	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	-16	True	NA	23	True	AATAAA	-24	NA	207752067	207795513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207761447_207767012_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_133620.nic	chr8	+	327	2	ISM	ENSG00000165392.11	ENST00000650667.1	5051	34	-50	115276	-50	-26766	5prime_fragment	FALSE	canonical	3	133	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGAAACAACTGCACAGCA	587	False	NA	21	True	NA	NA	NA	31033737	31058462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_31033974_31058371
transcript_133623.known	chr8	+	1703	7	FSM	ENSG00000157168.20	ENST00000650919.1	1703	7	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_6	12.512216252749	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCATTGAGGCATTT	8	False	NA	37	True	AATAAA	-42	NA	32548234	32743253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674
transcript_133625.known	chr8	+	1945	3	FSM	ENSG00000157168.20	ENST00000520502.7	1945	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACATAATAAAAGGAGT	13	False	NA	-9	True	NA	NA	NA	32647102	32743207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32648385_32727948_32728079_32742674
transcript_133627.known	chr8	+	927	5	FSM	ENSG00000247134.8	ENST00000666221.1	927	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	108.50662422175	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGAGTCTGAATTAG	-2	True	NA	24	True	AATAAA	-21	NA	32928000	33044855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32951027_32951120_32996200_32996317_33041634_33041772_33044366
transcript_133628.known	chr8	+	1477	4	FSM	ENSG00000247134.8	ENST00000666042.1	1477	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	12.3558353285671	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	NA	False	NA	NA	False	AGTAAA	-1	NA	32927920	33045445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041744_33044366
transcript_13363.known	chr1	-	7969	8	FSM	ENSG00000174059.17	ENST00000310833.12	7969	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1.67819144635296	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTCACTTTAACCCTT	-21	True	NA	NA	False	NA	NA	NA	207911125	207880971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_207887924_207888681_207888847_207889160_207889214_207889464_207889622_207897492_207897574_207898972_207899227_207899820_207900004_207911001
transcript_133630.nic	chr8	+	674	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	-32	241	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.030989097709	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	NA	False	NA	22	True	AATAAA	-19	NA	32927920	33044614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_133631.nic	chr8	+	915	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	-32	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.030989097709	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGAGTCTGAATTAG	NA	False	NA	24	True	AATAAA	-21	NA	32927920	33044855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_133633.known	chr8	+	657	4	FSM	ENSG00000247134.8	ENST00000670899.1	657	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	112.178429299041	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	3	True	NA	22	True	AATAAA	-19	NA	32927976	33044614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996356_33041634_33041772_33044366
transcript_133638.known	chr8	+	1277	3	FSM	ENSG00000247134.8	ENST00000657565.1	1277	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACCCCAGCCAAACACT	3	True	NA	NA	False	NA	NA	NA	32927976	33045410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996317_33044366
transcript_133640.known	chr8	+	1314	3	FSM	ENSG00000247134.8	ENST00000666659.1	1314	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	80	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	-6	True	NA	NA	False	AGTAAA	-1	NA	32927967	33045445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_33041634_33041744_33044366
transcript_133642.known	chr8	+	1397	3	FSM	ENSG00000247134.8	ENST00000659524.1	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	33.5	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	NA	False	NA	NA	False	AGTAAA	-1	NA	32927912	33045445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_33041634_33041772_33044366
transcript_133644.known	chr8	+	634	2	FSM	ENSG00000247134.8	ENST00000664284.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTTCAGGGAGTCTGA	NA	False	NA	19	True	AATAAA	-45	NA	32927943	33044850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_33044366
transcript_133650.known	chr8	-	3549	5	FSM	ENSG00000172728.16	ENST00000327671.10	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	18.7399973319102	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGAGTTGTGTTTTTT	-22	True	NA	NA	False	TATAAA	-2	NA	33473146	33370823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33372805_33388962_33389799_33453215_33453511_33461371_33461726_33473063
transcript_133652.nnic	chr8	-	1809	4	Fusion	ENSG00000172728.16_ENSG00000129696.13	novel	3549	5	NA	NA	-351	0	intron_retention	FALSE	canonical	3	27	junction_1	41.2337510083939	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTATCCACTCTTCAAG	NA	False	NA	-27	True	AATAAA	-17	NA	33473497	33372078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr8_-_33372805_33453215_33453511_33461371_33461726_33473063
transcript_133655.known	chr8	-	2187	3	FSM	ENSG00000172728.16	ENST00000416169.5	2187	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	7.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCCAGTCTTGGGTA	11	True	NA	NA	False	ATTAAA	-15	NA	33473113	33451727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33453511_33461371_33461726_33473063
transcript_133658.known	chr8	+	3561	10	FSM	ENSG00000198042.11	ENST00000360128.11	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	43.1134020009876	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTGACTGGGAGAAAAAA	-4	True	NA	8	True	AATAAA	-18	NA	33485181	33501262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284_33490340_33495541_33495617_33496624_33496742_33497231_33497298_33498431
transcript_13366.known	chr1	-	11508	32	FSM	ENSG00000076356.7	ENST00000367033.4	11508	32	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_30	7.85958987261172	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGATTGTTCAGCAGCATA	-1	True	NA	NA	False	AATAAA	-39	NA	208244384	208022241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_208027339_208028008_208028160_208028829_208029043_208031589_208031760_208033318_208033510_208034492_208034593_208038370_208038475_208038824_208038985_208039620_208039768_208039991_208040059_208042097_208042367_208043060_208043204_208044507_208044743_208045066_208045211_208045877_208046118_208051008_208051103_208051255_208051424_208052326_208052464_208054420_208054539_208060685_208060838_208079259_208079451_208082411_208082509_208084379_208084581_208092785_208092901_208096028_208096126_208096729_208096884_208098845_208098970_208103146_208103248_208142328_208142464_208210279_208210463_208216734_208218003_208243642
transcript_133668.known	chr8	-	2516	8	FSM	ENSG00000129696.13	ENST00000613904.1	2516	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	101.210429405315	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTCTTCCTCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	33513185	33498508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33512959
transcript_133674.known	chr8	-	2131	8	FSM	ENSG00000129696.13	ENST00000431156.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	73.7405822419904	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-12	True	NA	-2	True	AATAAA	-35	NA	33513135	33498721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33513081
transcript_133675.known	chr8	-	2242	7	FSM	ENSG00000129696.13	ENST00000360742.9	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	42.0317340430616	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	14	True	NA	-20	True	AATAAA	-19	NA	33513109	33498953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966
transcript_133676.known	chr8	-	1588	6	FSM	ENSG00000129696.13	ENST00000520636.5	1588	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	106.437963152251	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	411	False	NA	-73	True	NA	NA	NA	33512712	33499117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966
transcript_133678.known	chr8	-	1872	6	FSM	ENSG00000133874.2	ENST00000256257.2	1872	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.05941170815567	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTGTGGTTGTGGC	-2	True	NA	-1	True	AATAAA	-26	NA	33567128	33547753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33548868_33549409_33549493_33551043_33551086_33551343_33551390_33558614_33558772_33566698
transcript_133679.known	chr8	-	1754	4	FSM	ENSG00000133878.9	ENST00000256261.9	1754	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	11.4309521329882	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTGAAGTCATT	-41	True	NA	-3	True	AATAAA	-16	NA	33600023	33591329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33592213_33593532_33593748_33597294_33597592_33599664
transcript_133681.known	chr8	-	313	1	FSM	ENSG00000188512.6	ENST00000523393.1	313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATAATTGGCCACTGC	NA	False	NA	NA	False	AAAAAG	-9	NA	33969879	33969566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33969600_33969900
transcript_133682.nnic	chr8	-	555	3	NNC	ENSG00000254033.1	novel	430	2	NA	NA	7382	175	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTGCTGTAATTTGT	1192	False	NA	NA	False	AATAAA	-19	NA	34241564	34229118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_34229501_34238632_34238729_34241487
transcript_133684.known	chr8	+	475	1	FSM	ENSG00000243181.2	ENST00000477341.2	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAGGTGTTAAAAAAAAAA	30	False	NA	NA	False	NA	NA	NA	34874158	34874633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_34874200_34874600
transcript_133693.nnic	chr8	-	877	5	NNC	ENSG00000253414.3	novel	596	3	NA	NA	-32843	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTGTGTGCCTCTGGT	NA	False	NA	-14	True	AATAAA	-14	NA	37554290	37516409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_37516701_37516802_37516957_37521307_37521377_37529096_37529191_37554021
transcript_133694.known	chr8	+	5387	12	FSM	ENSG00000147475.17	ENST00000519638.3	5387	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.01855201914552	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATACGAAGGGCTTT	2	True	NA	NA	False	AATAAA	-25	NA	37736633	37758422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
transcript_1337.known	chr1	+	1025	3	FSM	ENSG00000234546.5	ENST00000412639.4	1034	3	0	9	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCATTGGTGGAATG	-35	True	NA	7	True	AATAAA	-20	NA	9182163	9192089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9182317_9183632_9183808_9191392
transcript_13370.nnic	chr1	+	412	3	Antisense	novelGene_ENSG00000076356.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAGGGAGAAGCAGACA	3431	False	NA	14	True	AATAAA	-23	NA	208121570	208128139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_208121657_208126521_208126632_208127923
transcript_133709.known	chr8	+	1466	7	FSM	ENSG00000147475.17	ENST00000648919.1	1466	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	8.19891591749923	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTTTATCTCACTA	2	True	NA	NA	False	AGTAAA	-15	NA	37736633	37746550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37745568
transcript_133710.known	chr8	+	1742	7	FSM	ENSG00000147475.17	ENST00000335171.10	1742	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	9.83192080250175	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTTTGTTTATCTCAC	2	True	NA	NA	False	AGTAAA	-13	NA	37736684	37746548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37737008_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37745568
transcript_133713.known	chr8	+	550	3	FSM	ENSG00000147475.17	ENST00000519872.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTATGTTTTAAATCAC	4	True	NA	NA	False	AAGAAA	-14	NA	37736600	37740714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37736679_37737907_37738030_37740364
transcript_133714.nic	chr8	+	797	2	ISM	ENSG00000147475.17	ENST00000519872.1	550	3	-36	2124	-36	-2124	5prime_fragment	FALSE	canonical	3	12	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATTTTAATTGGCCGGC	765	False	NA	NA	False	AATAAA	-9	NA	37736564	37738590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_37736679_37737907
transcript_13372.nnic	chr1	+	770	2	Antisense	novelGene_ENSG00000076356.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCGAGCATTTCTT	2282	False	NA	NA	False	ATTAAA	-21	NA	208120421	208121690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_208120599_208121097
transcript_133724.known	chr8	+	2507	8	FSM	ENSG00000147471.12	ENST00000328195.8	2507	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	64.3466377980883	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTGACTGAATA	2	True	NA	17	True	ATTAAA	-18	NA	37762644	37779768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754_37772890_37775338_37775482_37775917_37776017_37777972
transcript_133725.known	chr8	+	559	5	FSM	ENSG00000147471.12	ENST00000523994.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	131.609270190211	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGTAAGTATAGTAAAG	12	False	NA	NA	False	AATAAA	-28	NA	37762654	37766716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37766481
transcript_133726.known	chr8	+	516	5	FSM	ENSG00000147471.12	ENST00000523358.5	516	5	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	60.8127248197283	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACCAGACCTGAATTG	-4	True	NA	NA	False	NA	NA	NA	37762599	37772891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754
transcript_133728.known	chr8	-	1192	5	FSM	ENSG00000104221.13	ENST00000520601.5	1192	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.8648172562579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGCCAGTCCTGCCCTT	26	False	NA	NA	False	NA	NA	NA	37849838	37844701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_37845214_37845685_37845775_37846853_37847176_37848595_37848656_37849629
transcript_133736.known	chr8	-	2560	4	FSM	ENSG00000104221.13	ENST00000220659.11	2560	4	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_2	7.40870359029762	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGGGAGATGGGTCTT	3	True	NA	NA	False	NA	NA	NA	37849861	37843267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_37845214_37846853_37847176_37848595_37848656_37849629
transcript_133750.known	chr8	+	827	3	FSM	ENSG00000187840.5	ENST00000338825.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_1	4	6192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	-3	True	NA	22	True	AATAAA	-26	NA	38030533	38060365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38030719_38057080_38057261_38059903
transcript_133755.known	chr8	+	2918	16	FSM	ENSG00000129691.16	ENST00000343823.11	2918	16	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	43.355071470616	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTCACGCCTGTAATC	-3	True	NA	NA	False	ATTAAA	-38	NA	38105528	38140080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_133767.known	chr8	-	2565	7	FSM	ENSG00000147465.12	ENST00000276449.9	2565	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.44802681092953	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGCTGGGCGTGGTG	-1	True	NA	NA	False	ACTAAA	-6	NA	38150952	38142699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38144387_38145221_38145316_38145962_38146148_38146288_38146448_38148199_38148328_38148640_38148755_38150754
transcript_133773.known	chr8	+	4197	5	FSM	ENSG00000156735.11	ENST00000287322.5	4197	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.2091253319111	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	18	True	NA	NA	False	AATAAA	-30	NA	38176854	38213301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38177140_38192687_38192796_38207511_38207767_38209012_38209268_38210007
transcript_133780.known	chr8	+	1943	4	FSM	ENSG00000156735.11	ENST00000432471.6	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	104.124924969961	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCACATTTTTGTACAT	76	False	NA	NA	False	TTTAAA	-12	NA	38176587	38210888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38177140_38207511_38207767_38209012_38209268_38210007
transcript_133785.known	chr8	-	1568	4	FSM	ENSG00000175324.10	ENST00000522515.5	1568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	250.551835399827	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATGAATCTCAAAA	12	False	NA	-36	True	NA	NA	NA	38176716	38163358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38175815
transcript_133788.known	chr8	-	776	4	FSM	ENSG00000175324.10	ENST00000520286.5	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	230.752874064201	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTTTATATTGTTC	-2	True	NA	76	True	AAGAAA	-42	NA	38176730	38163427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176552
transcript_133789.nnic	chr8	-	745	4	NNC	ENSG00000175324.10	novel	906	4	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	247.723412072595	266	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	NA	False	NA	-16	True	AATAAA	-16	NA	38176754	38163338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_38163841_38169801_38169918_38171964_38172034_38176696
transcript_133798.known	chr8	+	2433	15	FSM	ENSG00000129691.16	ENST00000521652.5	2433	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	144.642275131104	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	26	False	NA	21	True	AATAAA	-18	NA	38105938	38139703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_133799.known	chr8	-	906	4	FSM	ENSG00000175324.10	ENST00000311351.9	906	4	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	20.5101600838869	2933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	-14	True	NA	-16	True	AATAAA	-16	NA	38176493	38163338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176274
transcript_133800.known	chr8	-	975	3	FSM	ENSG00000175324.10	ENST00000520755.5	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	265.5	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTATTTCCAAGTTTGA	54	False	NA	-12	True	AATAAA	-20	NA	38176674	38163334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38163841_38171964_38172034_38176274
transcript_133801.known	chr8	-	3995	10	FSM	ENSG00000147548.17	ENST00000316985.7	3995	10	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	29.6760284854066	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGTGTTGGGTTTTAT	-26	True	NA	1	True	AATAAA	-41	NA	38382272	38316416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38318039_38318894_38318941_38321071_38321173_38326729_38326857_38329377_38329894_38331430_38331586_38337304_38337468_38338535_38338608_38347496_38348216_38381798
transcript_133812.known	chr8	-	831	7	FSM	ENSG00000147535.17	ENST00000524616.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	193.638336998528	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAACATGGTGAACCCT	2	True	NA	NA	False	NA	NA	NA	38269196	38264350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268408_38268881_38268991_38269125
transcript_133813.known	chr8	-	875	7	FSM	ENSG00000147535.17	ENST00000531823.5	875	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	193.904615726393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGGGAGGCTGAGGAGG	24	True	NA	NA	False	NA	NA	NA	38269174	38264397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268822_38268991_38269125
transcript_133815.known	chr8	-	2134	7	FSM	ENSG00000147535.17	ENST00000424479.7	2134	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	135.839877142989	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-26	True	NA	-20	True	AATAAA	-2	NA	38269224	38263129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_133827.known	chr8	-	853	7	FSM	ENSG00000147535.17	ENST00000422581.6	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	172.937368238716	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-9	True	NA	-4	True	AATAAA	-18	NA	38269207	38264738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38264950_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_133830.known	chr8	-	581	6	FSM	ENSG00000147535.17	ENST00000531109.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	200.482019143862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTCTGACTGATGCAGA	23	True	NA	NA	False	NA	NA	NA	38269175	38264542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268881_38268991_38269125
transcript_133840.known	chr8	+	1668	5	FSM	ENSG00000085788.14	ENST00000519857.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	12.6959639255946	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTTATTTAGAAATAAAAA	44	True	NA	-24	True	NA	NA	NA	38231670	38239058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38231860_38232986_38233215_38234393_38234585_38237537_38237628_38238088
transcript_13385.nnic	chr1	-	693	4	NNC	ENSG00000232537.2	novel	732	4	NA	NA	-2592	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.24721912892465	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTTTAGTGTGTTC	NA	False	NA	-6	True	GATAAA	-15	NA	209157693	209147273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209147595_209151404_209151506_209153664_209153751_209157508
transcript_133856.known	chr8	-	794	5	FSM	ENSG00000147535.17	ENST00000419686.2	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	59.1121814857141	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	NA	False	NA	-17	True	AATAAA	-18	NA	38269243	38266979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_133868.known	chr8	-	1590	3	FSM	ENSG00000147535.17	ENST00000528814.1	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	42.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATACCTTTAACGAAG	-32	True	NA	-38	True	NA	NA	NA	38269230	38267000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38267392_38267896_38268991_38269125
transcript_133870.known	chr8	-	496	3	FSM	ENSG00000147535.17	ENST00000530193.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	116.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGGTAAATGTGT	1876	False	NA	-28	True	AGTAAA	-11	NA	38267322	38263137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38263407_38266140_38266312_38267266
transcript_133873.known	chr8	+	2856	11	FSM	ENSG00000165046.13	ENST00000379957.9	2856	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.2614551505325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGGTATTTTAATTAGT	-24	True	NA	NA	False	AATACA	-18	NA	38386475	38409527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38386569_38387949_38388031_38392541_38392996_38394097_38394242_38400271_38400410_38400852_38401054_38402524_38402645_38404392_38404507_38406945_38407039_38407361_38407464_38408211
transcript_133874.known	chr8	+	2745	11	FSM	ENSG00000165046.13	ENST00000523268.6	2745	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.34050688284214	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGGTATTTTAATTAGT	2	True	NA	NA	False	AATACA	-18	NA	38386501	38409527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38386569_38387949_38388031_38392541_38392996_38394182_38394242_38400271_38400410_38400852_38401054_38402524_38402645_38404392_38404507_38406945_38407039_38407361_38407464_38408211
transcript_133875.known	chr8	+	1776	11	FSM	ENSG00000165046.13	ENST00000523983.6	1776	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.28024389337134	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTTTTTTTAGTTTCA	1	True	NA	NA	False	TATAAA	-15	NA	38386500	38408543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38386569_38387949_38388031_38392612_38392996_38394097_38394242_38400271_38400410_38400852_38401054_38402524_38402645_38404392_38404507_38406945_38407039_38407361_38407464_38408211
transcript_133877.known	chr8	-	826	6	FSM	ENSG00000077782.22	ENST00000484370.5	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	360.837692044498	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGTGGAGAATGAGTAC	86	False	NA	NA	False	NA	NA	NA	38457446	38426178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38426246_38427920_38428094_38428351_38428436_38429246_38429391_38429681_38429949_38457355
transcript_133878.known	chr8	+	2240	3	FSM	ENSG00000165046.13	ENST00000519476.6	2240	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATACTTTAGGGTCCAC	66	False	NA	NA	False	ATTAAA	-30	NA	38386302	38394434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38386569_38387949_38388031_38392541
transcript_13388.known	chr1	-	473	3	FSM	ENSG00000232537.2	ENST00000416349.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTGTTCATGTAAG	NA	False	NA	1	True	GATAAA	-22	NA	209155101	209147266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209147595_209151404_209151506_209155057
transcript_133881.known	chr8	-	695	1	FSM	ENSG00000272159.1	ENST00000606593.1	695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGTGTGTGCCTTGGGA	5503	False	NA	NA	False	AATAAA	-27	NA	38408742	38408047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38408000_38408700
transcript_133882.known	chr8	-	764	3	FSM	ENSG00000077782.22	ENST00000474970.1	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_2	43.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGGGTAAGAGGGCAGAGG	NA	False	NA	NA	False	NA	NA	NA	38429811	38426126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38426246_38427920_38428436_38429681
transcript_133883.known	chr8	+	650	4	FSM	ENSG00000165046.13	ENST00000530448.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCACCCCACTCAAC	1	True	NA	NA	False	AATATA	-26	NA	38404339	38408499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38404507_38406945_38407039_38407361_38407464_38408211
transcript_133889.nic	chr8	+	1966	3	ISM	ENSG00000147526.20	ENST00000522904.5	1724	7	-27	15076	15	972	5prime_fragment	FALSE	canonical	3	6	junction_1	11	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGGCATGAGATAGACAG	7	True	NA	NA	False	NA	NA	NA	38757253	38821215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_38757410_38788703_38788820_38819521
transcript_13389.nnic	chr1	-	646	3	NNC	ENSG00000232537.2	novel	755	3	NA	NA	-2575	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGATTTGTTGCTTTC	NA	False	NA	50	True	NA	NA	NA	209157676	209147217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209147595_209151404_209151506_209157508
transcript_133891.known	chr8	+	4112	22	FSM	ENSG00000168615.13	ENST00000487273.7	4112	22	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_18	20.9863361226984	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	25	True	NA	NA	False	ATTAAA	-20	NA	38996972	39105261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_133892.known	chr8	+	3836	21	FSM	ENSG00000168615.13	ENST00000379917.7	3836	21	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_17	25.7842490679872	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTGTTAATAAAGAACA	78	False	NA	NA	False	NA	NA	NA	38997025	39105144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_133897.nnic	chr8	+	645	5	NNC	ENSG00000168615.13	novel	2053	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	52.5327278941423	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGACTGGCCTAAAGTAAT	-28	True	NA	NA	False	AATAAA	-18	NA	38996919	39016019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39015851
transcript_133899.known	chr8	+	3894	22	FSM	ENSG00000168615.13	ENST00000677359.1	3894	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	31.7813533659079	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTTACAATAAATAAAAT	-34	True	NA	-14	True	AATACA	-1	NA	38996913	39104968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091242_39091347_39101862_39101931_39103606
transcript_133905.known	chr8	-	469	4	FSM	ENSG00000169490.17	ENST00000522434.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	213.264051249983	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAAGTGATGGCAGCA	-3	True	NA	NA	False	NA	NA	NA	38996509	38991371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996418
transcript_133907.known	chr8	-	3295	4	FSM	ENSG00000169490.17	ENST00000456845.6	3295	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	227.394419945218	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	23	True	NA	0	True	AATAAA	-21	NA	38996483	38988807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995694_38996418
transcript_133908.known	chr8	-	1631	4	FSM	ENSG00000169490.17	ENST00000397070.6	1631	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	213.735038462735	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-3	True	NA	-3	True	AATAAA	-15	NA	38996509	38990804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996212
transcript_133925.known	chr8	-	3239	4	FSM	ENSG00000169490.17	ENST00000456397.7	3239	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	82.9832647117611	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-3	True	NA	0	True	AATAAA	-21	NA	38996509	38988807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996212
transcript_133926.known	chr8	-	570	2	FSM	ENSG00000169490.17	ENST00000517872.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTTGTTTTGTCGTAA	-3	True	NA	NA	False	NA	NA	NA	38996509	38995315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38995795_38996418
transcript_133936.nnic	chr8	+	1657	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	188.580592850908	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	123	True	AATAAA	-17	NA	39902282	39928426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_133945.nnic	chr8	+	1632	10	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	245.01599846984	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	123	True	AATAAA	-17	NA	39902303	39928426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918945_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_13395.nnic	chr1	-	590	3	NNC	ENSG00000232537.2	novel	475	3	NA	NA	-2575	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTTTAGTGTGTTC	NA	False	NA	-6	True	GATAAA	-15	NA	209157676	209147273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209147595_209151404_209151506_209157508
transcript_13396.nnic	chr1	-	727	2	NIC	ENSG00000232537.2	novel	473	3	NA	NA	-362	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTTTAGTGTGTTC	NA	False	NA	-6	True	GATAAA	-15	NA	209155463	209147273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_209147595_209155057
transcript_13397.nnic	chr1	-	506	2	NNC	ENSG00000232537.2	novel	673	3	NA	NA	-2592	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTTTAGTGTGTTC	NA	False	NA	-6	True	GATAAA	-15	NA	209157693	209147273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209147595_209157508
transcript_133976.nnic	chr8	+	543	4	NNC	ENSG00000131203.13	novel	612	5	NA	NA	-111	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	197	junction_3	277.378201498724	660	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	39902163	39915721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_39902449_39913888_39914010_39914193_39914246_39915636
transcript_13398.nnic	chr1	-	418	2	NNC	ENSG00000232537.2	novel	564	3	NA	NA	-2592	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATCCTCTGATTTTCA	NA	False	NA	-1	True	ATTAAA	-18	NA	209157693	209155621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209155855_209157508
transcript_133984.nnic	chr8	+	352	3	NIC	ENSG00000131203.13	novel	612	5	NA	NA	23	-2213	combination_of_known_splicesites	FALSE	canonical	3	82	junction_2	373.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACTTTGTATCATGGGT	NA	False	NA	NA	False	AATAAA	-21	NA	39902297	39915716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_39902449_39913888_39914010_39915636
transcript_13399.nnic	chr1	-	460	2	NNC	ENSG00000232537.2	novel	564	3	NA	NA	-2592	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATCCTCTGATTTTCA	NA	False	NA	-1	True	ATTAAA	-18	NA	209157693	209155621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209155897_209157508
transcript_133991.known	chr8	+	1709	12	FSM	ENSG00000131203.13	ENST00000522495.5	1709	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	161.988674229134	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	22	False	NA	123	True	AATAAA	-17	NA	39902374	39928426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39902449_39913000_39913149_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_133992.known	chr8	+	1525	9	FSM	ENSG00000131203.13	ENST00000253513.11	1525	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	205.916207169324	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCGGCTGGGCGCGGT	11	False	NA	NA	False	AATAAA	-35	NA	39913868	39928444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39914010_39917874_39917971_39918087_39918208_39918814_39918945_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_133993.known	chr8	+	1849	10	FSM	ENSG00000131203.13	ENST00000518237.6	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_7	33.8059093380557	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGCTTCATTTATA	-1	True	NA	NA	False	AATAAA	-21	NA	39913890	39928790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_133994.known	chr8	+	102	2	FSM	ENSG00000253838.1	ENST00000520185.1	102	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	337	False	NA	NA	False	AATAAA	-26	NA	39914228	39915721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39914246_39915636
transcript_133995.known	chr8	+	700	5	FSM	ENSG00000131203.13	ENST00000521636.1	700	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_4	38.6417843790889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGTGTCATAAATTCA	3993	False	NA	NA	False	AATAAA	-19	NA	39917884	39922911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551
transcript_133997.known	chr8	-	663	3	FSM	ENSG00000253802.2	ENST00000521030.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTGTGTACTCCGGAA	7	True	NA	NA	False	ATTAAA	-20	NA	40343363	40333172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40333670_40333873_40333954_40343277
transcript_1340.known	chr1	+	488	3	FSM	ENSG00000234546.5	ENST00000665148.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACTTCTCCCCA	15	True	NA	NA	False	TATAAA	-20	NA	9182213	9185386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9182317_9183632_9183808_9185176
transcript_134000.known	chr8	-	505	2	FSM	ENSG00000253802.2	ENST00000522486.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTCTATTAAATATAAGA	29	False	NA	NA	False	AAAACA	-20	NA	40343402	40299074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40299455_40343277
transcript_134005.known	chr8	-	2471	7	FSM	ENSG00000165061.15	ENST00000297737.11	2471	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	9.65516557197349	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-3	True	NA	NA	False	AGTAAA	-20	NA	40897826	40530589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_134010.known	chr8	-	2250	6	FSM	ENSG00000165061.15	ENST00000315769.11	2250	6	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_2	17.9666357451806	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-10	False	NA	NA	False	AGTAAA	-20	NA	40897833	40530589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40532239_40581164_40581262_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_134011.nnic	chr8	-	2412	6	NIC	ENSG00000165061.15	novel	2471	7	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.49975609611	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	40897864	40530589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_40532239_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_134013.nnic	chr8	-	907	6	NIC	ENSG00000165061.15	novel	2471	7	NA	NA	-31	-1505	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.49975609611	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACGACTGATCTTGATTT	NA	False	NA	1	True	AATAAA	-28	NA	40897864	40532094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_40532239_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_134015.nic	chr8	-	2007	6	ISM	ENSG00000165061.15	ENST00000297737.11	2471	7	-38	49428	-31	1186	5prime_fragment	FALSE	canonical	3	34	junction_1	10.4957134107215	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATGAATACATTG	NA	False	NA	NA	False	NA	NA	NA	40897864	40580017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_134019.nic	chr8	-	1437	6	NIC	ENSG00000165061.15	novel	2471	7	NA	NA	-31	271	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	24.7111310951158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATGATAA	NA	False	NA	NA	False	TTTAAA	-10	NA	40897864	40674092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_40674932_40697244_40697402_40767640_40767731_40808508_40808572_40825574_40825681_40897682
transcript_13402.nic	chr1	+	986	5	NIC	ENSG00000230937.13	novel	1007	5	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_3	10.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-9	True	NA	21	True	ACTAAA	-21	NA	209428811	209432549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432203
transcript_134023.nic	chr8	-	1374	5	ISM	ENSG00000165061.15	ENST00000297737.11	2471	7	-38	143503	-31	271	5prime_fragment	FALSE	canonical	3	34	junction_1	10.5475115548645	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATGATAA	NA	False	NA	NA	False	TTTAAA	-10	NA	40897864	40674092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_134025.known	chr8	-	564	5	FSM	ENSG00000165061.15	ENST00000523188.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	26.7616796931732	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGACCCCATTAAAGAC	-1	True	NA	NA	False	NA	NA	NA	40897824	40697269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40697402_40767640_40767731_40786688_40786783_40825574_40825681_40897682
transcript_134026.nic	chr8	-	1992	4	ISM	ENSG00000165061.15	ENST00000315769.11	2250	6	-31	165198	-31	1208	5prime_fragment	FALSE	canonical	3	36	junction_2	9.46337971105226	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	40897864	40695787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_40697402_40767640_40767731_40825574_40825681_40897682
transcript_134029.known	chr8	-	4464	3	FSM	ENSG00000104332.12	ENST00000220772.8	4464	3	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_1	48	2629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTGTGAGCTGTGACT	-16	True	NA	-10	True	ACTAAA	-18	NA	41309473	41261961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_41265490_41303460_41303539_41308615
transcript_13403.known	chr1	+	798	5	FSM	ENSG00000230937.13	ENST00000657184.2	809	5	1	10	0	-10	multi-exon	FALSE	canonical	3	6	junction_4	18.0883249639097	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGGCAGATTGCAGAT	-1	True	NA	9	True	AATAAA	-21	NA	209428819	209432838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432672
transcript_134039.known	chr8	+	6298	13	FSM	ENSG00000158669.11	ENST00000396987.7	6298	13	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	43.0989655714999	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTTTGATTTATTAAA	3	True	NA	NA	False	AATAAA	-17	NA	41578199	41625001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_13404.known	chr1	+	1007	5	FSM	ENSG00000230937.13	ENST00000429156.6	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	15.3704261489394	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCCTCTATGTTTTA	-4	True	NA	23	True	ACTAAA	-23	NA	209428816	209432551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432203
transcript_134062.known	chr8	+	3770	8	FSM	ENSG00000147536.12	ENST00000276533.4	3770	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	15.9770243200181	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	5	True	NA	22	True	AATAAA	-21	NA	41529260	41545030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
transcript_13407.known	chr1	+	916	4	FSM	ENSG00000230937.13	ENST00000667171.1	916	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	22.69116323349	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	2	True	NA	21	True	ACTAAA	-21	NA	209428822	209432549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209432203
transcript_134072.known	chr8	+	808	6	FSM	ENSG00000147533.18	ENST00000518270.5	808	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	278.799282638962	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTGTAGGACTCTGT	NA	False	NA	NA	False	NA	NA	NA	41490395	41509769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41490567_41490832_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_134075.known	chr8	+	1903	6	FSM	ENSG00000147533.18	ENST00000405786.2	1903	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	277.40252342039	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	-12	True	NA	NA	False	AATAAA	-10	NA	41490561	41510974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507053_41507122_41509583
transcript_134078.known	chr8	+	582	6	FSM	ENSG00000147533.18	ENST00000523420.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	279.19842406432	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGAGCCACGGTGCCA	38	False	NA	NA	False	NA	NA	NA	41490611	41509673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41490690_41490869_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_13408.known	chr1	+	908	4	FSM	ENSG00000230937.13	ENST00000431096.6	926	4	18	0	1	0	multi-exon	FALSE	canonical	3	22	junction_2	13.4742552876052	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	17	False	NA	21	True	ACTAAA	-21	NA	209428837	209432549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209431742_209431826_209432203
transcript_134080.known	chr8	+	835	6	FSM	ENSG00000147536.12	ENST00000520354.5	835	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	50.6699121767544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTTGGTGGTGTGCACC	-7	True	NA	5	True	AATACA	-13	NA	41529217	41542239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41541808_41541900_41541990
transcript_134086.known	chr8	+	494	4	FSM	ENSG00000147536.12	ENST00000520631.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	12.5521135891752	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACCTGGAGGGATT	2	True	NA	NA	False	NA	NA	NA	41529226	41537301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179
transcript_13409.known	chr1	+	1072	4	FSM	ENSG00000230937.13	ENST00000451937.6	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	8.80656320908194	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-3	True	NA	21	True	ACTAAA	-21	NA	209428817	209432549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432203
transcript_134090.known	chr8	+	1595	2	FSM	ENSG00000287535.1	ENST00000665362.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTGAGA	NA	False	NA	NA	False	NA	NA	NA	41566857	41568641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41566924_41567112
transcript_134093.known	chr8	+	2099	5	FSM	ENSG00000147533.18	ENST00000357743.9	2099	5	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_3	20.4266982158155	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	8	True	NA	NA	False	AATAAA	-16	NA	41490581	41510980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_134094.known	chr8	+	2022	3	FSM	ENSG00000147536.12	ENST00000520710.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTGCAAAACATTCCTA	-4	True	NA	NA	False	NA	NA	NA	41529220	41538036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41530299_41536359_41536447_41537179
transcript_134095.known	chr8	-	884	2	FSM	ENSG00000253174.2	ENST00000578500.1	884	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTGTATCGGATCAAG	NA	False	NA	NA	False	TTTAAA	-37	NA	41544769	41542046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_41542117_41543955
transcript_134096.known	chr8	+	375	3	FSM	ENSG00000147536.12	ENST00000520736.1	375	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCTTGTCTTGGGTTGAC	5	True	NA	NA	False	NA	NA	NA	41529229	41536452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41529397_41530183_41530299_41536359
transcript_134097.known	chr8	-	1770	1	FSM	ENSG00000260588.1	ENST00000563810.1	1770	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGACCGGGAACTCCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	41829934	41828164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_41828200_41829900
transcript_134098.known	chr8	-	3326	9	FSM	ENSG00000083168.11	ENST00000648030.1	3326	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	4.55350140002175	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACTAAAAATACAAAAATTA	-1	True	NA	NA	False	NA	NA	NA	42051987	41973403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42049575_42049708_42051900
transcript_1341.known	chr1	+	3865	7	FSM	ENSG00000171612.7	ENST00000302692.7	3865	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_4	33.9628064538581	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAATTTTAGTTTTCTGC	14	True	NA	NA	False	AATAAA	-16	NA	9539464	9585173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9539748_9553625_9553806_9567283_9567362_9570257_9570359_9573345_9573413_9579953_9580235_9582298
transcript_13410.known	chr1	+	1094	4	FSM	ENSG00000230937.13	ENST00000670788.1	1094	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	14.4299072146089	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-1	True	NA	21	True	ACTAAA	-21	NA	209428819	209432549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209430424_209430501_209431742_209431826_209432203
transcript_134100.known	chr8	-	3100	8	FSM	ENSG00000083168.11	ENST00000470574.2	3100	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2.60298102261266	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAATCCCAGCACATTGG	-1	True	NA	NA	False	NA	NA	NA	42051987	41973497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42051900
transcript_134102.known	chr8	-	8006	18	FSM	ENSG00000083168.11	ENST00000396930.4	8006	18	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_17	5.21244186279429	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAGGTAAAAAAAAAAAAAA	-4	True	NA	NA	False	NA	NA	NA	42051990	41930760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_41934868_41937255_41937569_41940841_41941445_41942792_41943001_41943747_41943980_41946590_41946685_41947750_41947913_41949221_41949364_41955295_41955412_41974703_41974823_41977007_41977328_41978641_41978778_41980845_41980928_41981838_41981955_41987454_41987564_42048377_42049303_42049575_42049708_42051900
transcript_134107.known	chr8	+	3669	10	FSM	ENSG00000070718.12	ENST00000518421.5	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	29.665210118218	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGTCCTAAGTGGTT	NA	False	NA	21	True	AATAAA	-17	NA	42152945	42171182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42153106_42154477_42154537_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_134109.known	chr8	+	3494	9	FSM	ENSG00000070718.12	ENST00000396926.8	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	11.7046999107196	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTCCTAAGTGGTTT	6	True	NA	22	True	AATAAA	-18	NA	42153062	42171183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_134117.nic	chr8	+	1174	6	ISM	ENSG00000070718.12	ENST00000530375.5	1212	8	-59	3352	-3	0	5prime_fragment	FALSE	canonical	3	68	junction_1	13.5410487038486	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	-31	True	NA	NA	False	AATAAA	-21	NA	42153025	42165779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_134120.nic	chr8	+	1273	4	ISM	ENSG00000070718.12	ENST00000530375.5	1212	8	-59	6175	-3	-2177	5prime_fragment	FALSE	canonical	3	68	junction_1	16.3571255285137	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGTAAC	-31	True	NA	NA	False	NA	NA	NA	42153025	42162956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280
transcript_134122.nic	chr8	+	526	2	ISM	ENSG00000070718.12	ENST00000530375.5	1212	8	-59	14070	-3	343	5prime_fragment	FALSE	canonical	3	68	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAACTCTGGTATTACTC	-31	True	NA	NA	False	AAGAAA	-15	NA	42153025	42155061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_42153106_42154615
transcript_134123.known	chr8	+	1094	5	FSM	ENSG00000070718.12	ENST00000517922.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	8.67107259801231	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	1559	False	NA	NA	False	AATAAA	-21	NA	42154615	42165779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_134124.known	chr8	-	3062	14	FSM	ENSG00000104368.19	ENST00000220809.9	3062	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	3.54347470962493	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACGAGGAGCCATGG	-1	True	NA	NA	False	GGGGCT	-39	NA	42207565	42174717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42207493
transcript_134125.known	chr8	-	2516	13	FSM	ENSG00000104368.19	ENST00000352041.7	2516	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.08811250749125	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGTGGAATGGTT	0	True	NA	-6	True	AATAAA	-28	NA	42207676	42175236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42191371_42191415_42193113_42193212_42207493
transcript_134126.known	chr8	+	3938	22	FSM	ENSG00000104365.16	ENST00000520810.6	3938	22	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_15	13.2166664522051	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGTGGGAAATAACACC	-16	True	NA	24	True	AATAAA	-26	NA	42271301	42332460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_13413.nic	chr1	+	851	3	FSM	ENSG00000230937.13	ENST00000692388.1	843	3	-8	0	-5	0	multi-exon	FALSE	canonical	3	13	junction_2	20.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-9	True	NA	21	True	ACTAAA	-21	NA	209428811	209432549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209432203
transcript_134130.known	chr8	+	2501	21	FSM	ENSG00000104365.16	ENST00000517890.5	2501	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	21.0249851367367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCCAGGGGTCTCTGGT	-2	True	NA	NA	False	GGGGCT	-41	NA	42271315	42331132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42271470_42272082_42272206_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_13414.nic	chr1	+	1020	3	NIC	ENSG00000230937.13	novel	1072	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	22	junction_1	11.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-3	True	NA	21	True	ACTAAA	-21	NA	209428817	209432549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_209429409_209431742_209431826_209432203
transcript_134143.known	chr8	+	447	2	FSM	ENSG00000104365.16	ENST00000518983.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGCTCTTAGTCTCTAT	14	False	NA	NA	False	AATAAA	-13	NA	42271369	42272429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42271470_42272082
transcript_134144.known	chr8	+	373	3	FSM	ENSG00000104365.16	ENST00000523018.5	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGTTTGTTTGCTTGT	NA	False	NA	25	True	AATAGA	-42	NA	42322440	42329314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42322495_42325969_42326098_42329123
transcript_134149.known	chr8	+	1290	14	FSM	ENSG00000070501.12	ENST00000265421.9	1290	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	23.3238075793812	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	0	True	NA	16	True	AATAAA	-17	NA	42338493	42371808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_13415.known	chr1	+	523	2	FSM	ENSG00000230937.13	ENST00000444286.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGGCAAAGAATCTTGC	262	False	NA	NA	False	NA	NA	NA	209429082	209430621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209430424
transcript_134156.nic	chr8	+	1244	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	42.6389884182696	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338452	42371808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
transcript_13416.nic	chr1	+	936	2	FSM	ENSG00000230937.13	ENST00000691439.1	935	2	-1	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	-2	True	NA	21	True	ACTAAA	-21	NA	209428818	209432549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209432203
transcript_134162.nic	chr8	+	1273	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_1	23.3249985113731	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338452	42371808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_134168.nic	chr8	+	1186	12	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	44.5441558252238	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338452	42371808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
transcript_13417.known	chr1	+	849	4	FSM	ENSG00000230937.13	ENST00000458250.6	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	14.7044966667419	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATATTGTAATAAAGT	2	True	NA	-29	True	ATTAAA	-14	NA	209428822	209432800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432672
transcript_13418.known	chr1	+	2456	13	FSM	ENSG00000008118.10	ENST00000361322.3	2456	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.81811868577262	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCTTCATTTGGTTCTT	-2	True	NA	6	True	AATAAA	-20	NA	209583713	209613939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209583773_209594954_209595076_209599982_209600112_209603213_209603289_209605535_209605675_209606319_209606444_209607857_209607934_209608979_209609093_209609850_209609930_209611464_209611553_209611791_209612217_209612784_209612913_209613039
transcript_134197.known	chr8	+	725	9	FSM	ENSG00000070501.12	ENST00000520008.5	725	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	26.0228265182705	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGCCTCAGAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	42338458	42361361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294
transcript_134198.known	chr8	+	1341	15	FSM	ENSG00000070501.12	ENST00000522610.5	1341	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	53.5718571411429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTTGCAATGTAGT	13	False	NA	-27	True	TTTAAA	-19	NA	42338506	42371765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361095_42361203_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_134199.known	chr8	-	896	4	FSM	ENSG00000104371.5	ENST00000220812.3	896	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAATCTTGGACATTAAC	0	True	NA	NA	False	AATAAA	-23	NA	42377229	42374062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42374360_42374760_42374914_42375679_42375831_42376934
transcript_13420.nnic	chr1	+	524	2	NNC	ENSG00000008118.10	novel	2456	13	NA	NA	0	-18477	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTCCTATTTCTTAT	-2	True	NA	NA	False	ATTAAA	-17	NA	209583713	209591436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_209583773_209590971
transcript_134201.known	chr8	+	1418	10	FSM	ENSG00000078668.14	ENST00000022615.9	1418	10	0	0	0	0	multi-exon	TRUE	canonical	3	1159	junction_5	72.4161498937364	9375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTGTTTTAAGAAGC	13	True	NA	66	True	NA	NA	NA	42391879	42405937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787_42402016_42403310_42403462_42404866_42404925_42405370
transcript_134210.known	chr8	-	751	2	FSM	ENSG00000168575.10	ENST00000522707.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTAGCTTCAATATTT	NA	False	NA	NA	False	NA	NA	NA	42502628	42472248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42472655_42502283
transcript_134211.known	chr8	-	1265	2	FSM	ENSG00000168575.10	ENST00000523340.1	1265	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGAAGATCTGATTACC	3	True	NA	-7	True	TTTAAA	-12	NA	42541503	42534659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42535336_42540914
transcript_134213.nic	chr8	-	858	2	ISM	ENSG00000168575.10	ENST00000518384.1	557	3	-130	62346	0	8	5prime_fragment	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTACCATATTTTT	-5	True	NA	1	True	TTTAAA	-20	NA	42541711	42534651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_42535336_42541537
transcript_134218.known	chr8	+	2958	4	FSM	ENSG00000176209.12	ENST00000438528.7	2958	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	262.097098207685	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGGTATAGAGCCAAGT	2	True	NA	NA	False	AATAAA	-36	NA	42541154	42555193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42541200_42546468_42546607_42548655_42548781_42552543
transcript_13422.known	chr1	-	381	3	FSM	ENSG00000227591.6	ENST00000445272.6	422	3	33	8	33	2	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATTTTGTGTTT	8	True	NA	NA	False	AATAAA	-16	NA	209675247	209661363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209661568_209662910_209663062_209675221
transcript_134220.known	chr8	+	878	4	FSM	ENSG00000176209.12	ENST00000498447.5	878	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	233.350951715794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATGGTGACTTGACCTT	43	True	NA	NA	False	NA	NA	NA	42541657	42552829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42541706_42546468_42546607_42548374_42548781_42552543
transcript_134221.known	chr8	+	793	4	FSM	ENSG00000176209.12	ENST00000414154.6	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	99.3724755095136	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	-2	True	NA	11	True	AATAAA	-27	NA	42541612	42552980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42541706_42546468_42546607_42548655_42548781_42552543
transcript_134222.known	chr8	+	3704	4	FSM	ENSG00000176209.12	ENST00000417410.7	3704	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	236.195305250173	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGTATAGAGCCAAGTAA	-30	True	NA	NA	False	AATAAA	-38	NA	42541584	42555195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42542374_42546468_42546607_42548655_42548781_42552543
transcript_134223.known	chr8	+	691	4	FSM	ENSG00000176209.12	ENST00000416469.6	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	248.439127353161	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCAGAAAAAGAGCAAC	9	False	NA	NA	False	NA	NA	NA	42541792	42552608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42542156_42546468_42546607_42548655_42548781_42552543
transcript_134225.nic	chr8	+	704	3	NIC	ENSG00000176209.12	novel	793	4	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	279	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	411	False	NA	11	True	AATAAA	-27	NA	42541563	42552980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_42541706_42548655_42548781_42552543
transcript_134226.known	chr8	+	487	3	FSM	ENSG00000176209.12	ENST00000490331.2	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_2	13.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATTGTTCTGTGCATTG	4407	False	NA	10	True	CATAAA	-23	NA	42546427	42552726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42546607_42548655_42548781_42552543
transcript_134229.known	chr8	-	1943	2	FSM	ENSG00000131931.8	ENST00000345117.2	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAAGTGTCTTTTGTA	11	True	NA	-11	True	ATTAAA	-16	NA	42843305	42836675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42838337_42843023
transcript_134233.known	chr8	-	2161	3	FSM	ENSG00000131931.8	ENST00000254250.7	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0.5	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTGTCTTTTGTAGA	-9	True	NA	-9	True	ATTAAA	-18	NA	42843325	42836673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42838337_42839185_42839382_42843023
transcript_134234.known	chr8	+	14348	22	FSM	ENSG00000168172.9	ENST00000307602.9	14348	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_16	15.2593601622859	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	17	True	NA	108	True	AATAAA	-15	NA	42896977	43030535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357
transcript_13424.known	chr1	+	876	2	FSM	ENSG00000123689.6	ENST00000367029.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTAATTCCTGAGAG	0	True	NA	16	True	AATAAA	-19	NA	209675411	209676390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209675550_209675652
transcript_134246.known	chr8	-	4116	7	FSM	ENSG00000120925.16	ENST00000534961.5	4116	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	31.427164470672	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTTATTTTTCTGTT	-19	True	NA	-11	True	AATAAA	-23	NA	42896723	42853296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_134247.known	chr8	-	3764	7	FSM	ENSG00000120925.16	ENST00000527424.6	3764	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	14.9303940559741	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTGTTATTTTTC	19	True	NA	-15	True	AATAAA	-19	NA	42896605	42853300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_134248.nic	chr8	-	1762	7	NIC	ENSG00000120925.16	novel	4116	7	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_6	30.0758300892187	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-14	True	NA	NA	False	NA	NA	NA	42897306	42855247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_13425.known	chr1	-	4684	2	FSM	ENSG00000162757.4	ENST00000294811.2	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGAATTTTGTCCC	-7	True	NA	NA	False	ATTAAA	-16	NA	209784559	209779207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209783710_209784377
transcript_13426.known	chr1	-	4478	9	FSM	ENSG00000117595.12	ENST00000367021.8	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	9.62743475698485	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGACTACTTTCTACT	-7	True	NA	-2	True	AATAAA	-26	NA	209806142	209785616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209801239_209801417_209801971_209802044_209805946
transcript_134261.known	chr8	-	2023	6	FSM	ENSG00000120925.16	ENST00000240159.8	2023	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	45.3722382079615	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-31	True	NA	NA	False	NA	NA	NA	42896655	42855247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_134262.known	chr8	-	1265	6	FSM	ENSG00000120925.16	ENST00000319073.5	1265	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	37.8068776811839	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGGAAAATTCAGTATT	36	True	NA	-7	True	AATAAA	-13	NA	42896588	42855708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_134263.nic	chr8	-	1688	6	NIC	ENSG00000120925.16	novel	2023	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_2	44.50348300976	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-14	True	NA	NA	False	NA	NA	NA	42897306	42855247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_134268.known	chr8	-	1169	6	FSM	ENSG00000120925.16	ENST00000528318.5	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	16.3095064303001	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTATATGTGTTGGG	-19	True	NA	NA	False	AAAAAG	-11	NA	42896723	42861329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_134269.nic	chr8	-	996	6	NIC	ENSG00000120925.16	novel	1169	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	32.4752213233413	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTATATGTGTTGGG	-14	True	NA	NA	False	AAAAAG	-11	NA	42897306	42861329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_134282.known	chr8	+	1667	9	FSM	ENSG00000168522.13	ENST00000302279.8	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_5	48.6074839916653	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	-5	True	NA	32	True	AATAAA	-21	NA	43056322	43085785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_134284.known	chr8	+	982	8	FSM	ENSG00000168522.13	ENST00000533383.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	204.610032271447	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATATTGGAGA	2	True	NA	NA	False	AAGAAA	-10	NA	43056329	43085193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_134289.nic	chr8	+	1377	7	NIC	ENSG00000168522.13	novel	1667	9	NA	NA	-3	0	intron_retention	FALSE	canonical	3	38	junction_1	212.450582489199	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	-21	True	NA	32	True	AATAAA	-21	NA	43056411	43085785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_43056547_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_13429.known	chr1	-	4256	7	FSM	ENSG00000117595.12	ENST00000542854.5	4256	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	34.8743777324015	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATTAGAAGACTACTT	NA	False	NA	-8	True	AATAAA	-20	NA	209806175	209785622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209805946
transcript_134292.known	chr8	+	750	5	FSM	ENSG00000168522.13	ENST00000524546.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	273.547413623306	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTAGCCTGTTGATTA	27	False	NA	12	True	AATAAA	-35	NA	43056354	43070353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43070101
transcript_134294.known	chr8	+	4676	8	FSM	ENSG00000168522.13	ENST00000526755.5	4676	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	254.326481483296	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATAGAAGTTTGATTTT	NA	False	NA	35	True	AATAAA	-24	NA	43056307	43085788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43080442_43083117_43083181_43084709_43084882_43085159
transcript_134296.known	chr8	+	1868	5	FSM	ENSG00000185900.11	ENST00000331373.10	1868	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	11.247221879202	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGATTTTTAAAAATTTA	3	True	NA	NA	False	NA	NA	NA	43093514	43123434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43093564_43097523_43097616_43102504_43102601_43103527_43103831_43122106
transcript_134298.known	chr8	+	9535	4	FSM	ENSG00000185900.11	ENST00000676193.1	9535	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30.7354301526214	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTGTAGACATATGT	13	False	NA	15	True	AATAAA	-25	NA	43093497	43131180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43093564_43097523_43097616_43103527_43103831_43122106
transcript_134299.known	chr8	+	654	1	FSM	ENSG00000188873.4	ENST00000479243.1	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	594	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCACAATTTGAATAAATTC	33	False	NA	NA	False	NA	NA	NA	47157117	47157771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_47157100_47157800
transcript_134302.known	chr8	+	3625	20	FSM	ENSG00000164808.17	ENST00000297423.9	3625	20	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_17	13.4726562107834	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCGGCTTTTTAATTAA	-5	True	NA	NA	False	NA	NA	NA	47260937	47736306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_13431.known	chr1	+	8481	12	FSM	ENSG00000117597.18	ENST00000491415.7	8481	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	10.5227027292076	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTGGAGTACTGATT	-44	True	NA	10	True	ATTAAA	-19	NA	209827971	209857565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209828171_209830107_209830148_209830802_209831044_209833184_209833359_209835074_209835164_209836800_209837212_209838908_209839129_209840852_209841056_209842264_209842448_209842582_209842696_209843450_209843697_209851203
transcript_134321.nic	chr8	-	638	5	ISM	ENSG00000253729.8	ENST00000338368.7	12784	85	-90	180615	-90	0	5prime_fragment	FALSE	canonical	3	258	junction_2	32.6573115856159	1551	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGATACAGGTGAGATG	711	False	NA	NA	False	AGTAAA	-32	NA	47960268	47954349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
transcript_134325.known	chr8	+	4062	17	FSM	ENSG00000104738.18	ENST00000649973.1	4062	17	0	0	0	0	multi-exon	FALSE	canonical	3	1235	junction_1	128.460110540198	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	-9	True	NA	21	True	AATAAA	-21	NA	47960940	47978160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_134326.known	chr8	+	547	5	FSM	ENSG00000104738.18	ENST00000524086.5	547	5	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_3	632.138582511778	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGCTACATGTATTAAAA	8	True	NA	NA	False	AAGAAA	-9	NA	47960957	47962406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962077_47962217_47962304
transcript_134330.known	chr8	+	1322	5	FSM	ENSG00000169139.12	ENST00000521346.5	1322	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1920.43059950106	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAACAAAAAGGAAATAGG	-10	True	NA	-64	True	NA	NA	NA	48008418	48061480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_48008471_48034865_48035062_48043032_48043182_48049852_48049979_48060681
transcript_134333.known	chr8	+	612	4	FSM	ENSG00000169139.12	ENST00000517630.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1826.1676325634	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATGCAAAATACACATTA	22	False	NA	-15	True	ATTAAA	-5	NA	48008450	48060897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_48008572_48043032_48043182_48049852_48049979_48060681
transcript_134334.known	chr8	+	918	3	FSM	ENSG00000169139.12	ENST00000523432.5	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1956	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGGTAAATATTTGTT	-14	True	NA	50	True	NA	NA	NA	48008414	48061417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_48008471_48049852_48049979_48060681
transcript_134335.known	chr8	+	4342	4	FSM	ENSG00000169139.12	ENST00000523111.7	4342	4	0	0	0	0	multi-exon	FALSE	canonical	3	3458	junction_1	208.90348648758	4677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGTTACATGATTGA	2	True	NA	19	True	AATAAA	-19	NA	48008430	48064708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48060681
transcript_134336.known	chr8	-	648	5	FSM	ENSG00000034239.11	ENST00000523092.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTATTTTTTCTACT	13	True	NA	NA	False	AGTAAA	-17	NA	48735268	48724690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_48724802_48729041_48729147_48729719_48729872_48730539_48730645_48735093
transcript_134337.known	chr8	-	2104	6	FSM	ENSG00000034239.11	ENST00000262103.8	2104	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.979795897113271	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATATTTTAGAT	13	True	NA	NA	False	AATAAA	-41	NA	48735268	48723390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_48724802_48729041_48729147_48729719_48729872_48730539_48730645_48731347_48731504_48735093
transcript_134339.known	chr8	+	417	3	FSM	ENSG00000147481.17	ENST00000521574.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCGGAGGGGAGAAGG	8	True	NA	NA	False	AAAAAG	-20	NA	49909803	49911583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_49909905_49910891_49911045_49911420
transcript_134344.known	chr8	-	1204	6	FSM	ENSG00000168300.14	ENST00000519559.1	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	72.2921849164901	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTTGTTTTAGCT	215	False	NA	7	True	AATAAA	-39	NA	51898970	51820146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51839446_51839639_51845660_51845764_51898929
transcript_134345.known	chr8	-	4044	6	FSM	ENSG00000168300.14	ENST00000522514.6	4044	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	16.1046577113579	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTCTCCCATGGCCT	3	True	NA	-21	True	AATAAA	-18	NA	51899036	51817582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
transcript_134352.nic	chr8	-	1738	6	NIC	ENSG00000168300.14	novel	814	4	NA	NA	20	267	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	58.8713852393504	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTAACAAAAATGATTTCT	-4	True	NA	NA	False	AATAAA	-18	NA	51899166	51826661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_51827362_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
transcript_134362.nic	chr8	-	3809	3	ISM	ENSG00000168300.14	ENST00000522514.6	4044	6	-27	24908	-27	2318	5prime_fragment	FALSE	canonical	3	128	junction_1	21.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAAAATTAGCTGGGTA	-24	True	NA	19	True	NA	NA	NA	51899063	51842490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_51845764_51860844_51861247_51898929
transcript_134366.nnic	chr8	-	1329	3	NNC	ENSG00000168300.14	novel	1712	3	NA	NA	20	-580	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	84	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTATGTTCTCTTTAA	-4	True	NA	-7	True	AATAAA	-17	NA	51899166	51849524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_51850215_51860844_51861247_51898929
transcript_134368.known	chr8	-	856	2	FSM	ENSG00000168300.14	ENST00000521046.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTAAGAGAGACAGGAGA	15	True	NA	NA	False	TATAAA	-36	NA	51899024	51860485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_51861247_51898929
transcript_134371.known	chr8	-	1712	3	FSM	ENSG00000168300.14	ENST00000521344.1	1712	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTTTTATTAATGCA	-5	True	NA	NA	False	AATAAA	-29	NA	51899113	51848944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_51850087_51860860_51861247_51898929
transcript_134372.known	chr8	+	4085	3	FSM	ENSG00000228801.7	ENST00000518942.2	4085	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTTGCTACAACCTGG	3	True	NA	-5	True	ATTAAA	-4	NA	51899324	51949874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_51899847_51913056_51913181_51946435
transcript_134373.known	chr8	+	423	2	FSM	ENSG00000228801.7	ENST00000521612.1	423	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGAGTGTGTGGTGCCT	412	False	NA	NA	False	AATAAA	-19	NA	51899733	51911729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_51899847_51911419
transcript_134374.known	chr8	-	1140	5	FSM	ENSG00000196711.9	ENST00000358543.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	3.34477204006491	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGCTTTTGAAGTGTG	0	True	NA	NA	False	ATTAAA	-16	NA	52565430	52534036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_52534601_52538430_52538508_52539830_52539912_52542391_52542446_52565066
transcript_134383.nnic	chr8	+	820	2	FSM	ENSG00000288818.1	ENST00000685233.1	741	2	-77	-2	-77	2	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTGACTTTTTTCTT	116	False	NA	NA	False	TATAAA	-1	NA	52714527	52716277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_52714991_52715920
transcript_134388.known	chr8	-	1892	14	FSM	ENSG00000047249.18	ENST00000396774.6	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	56.2665886124514	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTATTTATTGTTC	230	False	NA	-62	True	AAGAAA	-27	NA	53843042	53715730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_13439.known	chr1	+	5208	9	FSM	ENSG00000143469.20	ENST00000537238.5	5208	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.04467242184086	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAAAACCCAAT	102	False	NA	NA	False	AATAAA	-14	NA	209938173	210164286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209938278_209952708_209952757_209953054_209953260_210013632_210013798_210021038_210021255_210094321_210094594_210100011_210100462_210155720_210155911_210160728
transcript_134392.nic	chr8	-	1874	13	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	72.922714034944	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	255	False	NA	-1	True	AATAAA	-30	NA	53843017	53715669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_1344.known	chr1	+	515	3	FSM	ENSG00000171608.17	ENST00000484851.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTGAATTTTTATAATT	497	False	NA	NA	False	ATTAAA	-17	NA	9688175	9691946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9688314_9691466_9691572_9691674
transcript_134408.known	chr8	-	2120	14	FSM	ENSG00000047249.18	ENST00000359530.7	2120	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_7	26.534782353662	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	27	True	NA	1	True	AATAAA	-27	NA	53843245	53715542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_134409.known	chr8	-	494	2	FSM	ENSG00000047249.18	ENST00000518072.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	NA	False	NA	-1	True	AATAAA	-30	NA	53743715	53715669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53716025_53743576
transcript_134410.known	chr8	-	1672	3	FSM	ENSG00000047249.18	ENST00000521335.1	1672	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	38.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTCTCTACTAAAAATACAA	13	True	NA	NA	False	NA	NA	NA	53843259	53831788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53833087_53841577_53841726_53843033
transcript_134411.known	chr8	+	1664	5	FSM	ENSG00000147509.14	ENST00000276500.4	1664	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	0.707106781186548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAGCACAAGAATT	22	False	NA	NA	False	AAGAAA	-23	NA	53880893	53959274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_53881085_53939575_53939725_53946664_53946749_53954075_53954311_53958269
transcript_134413.known	chr8	+	610	2	FSM	ENSG00000147509.14	ENST00000523064.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTCGATCACTTACTGA	-7	True	NA	NA	False	AATAAA	-17	NA	53880900	53913922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_53881085_53913496
transcript_134416.known	chr8	-	2718	9	FSM	ENSG00000187735.15	ENST00000396401.7	2718	9	0	0	0	0	multi-exon	FALSE	canonical	2	105	junction_8	500.783869922944	2768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTCATTTTATTTA	-1	True	NA	0	True	AATAAA	-27	NA	54022448	53966551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54022062
transcript_134423.known	chr8	-	625	4	FSM	ENSG00000187735.15	ENST00000521836.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	737.863733279316	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCGCAGAACAGCCCTG	518	False	NA	NA	False	AAGAAA	-12	NA	54021929	53993703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53993756_53999944_54000051_54010429_54010493_54021525
transcript_13443.known	chr1	+	2966	8	FSM	ENSG00000143469.20	ENST00000472886.5	2966	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.56696210375594	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTCGCAAGATCTTT	9	True	NA	10	True	TATAAA	-17	NA	209938250	210162326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209938278_209952708_209952757_210013632_210013798_210021038_210021255_210094321_210094594_210100011_210100462_210155720_210155911_210160728
transcript_134433.known	chr8	-	2526	9	FSM	ENSG00000120992.18	ENST00000618741.1	2526	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_8	458.404502050318	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	394	False	NA	-2	True	AATAAA	-23	NA	54101554	54046367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
transcript_134447.known	chr8	-	2515	9	FSM	ENSG00000120992.18	ENST00000316963.8	2515	9	0	0	0	0	multi-exon	TRUE	canonical	3	1369	junction_4	81.1664955508121	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	1	True	NA	-1	True	AATAAA	-24	NA	54101947	54046366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_134448.known	chr8	-	1308	8	FSM	ENSG00000120992.18	ENST00000343231.10	1308	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	516.020407759703	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTGTTTTTTCTT	120	False	NA	39	True	AAGAAA	-4	NA	54101828	54047406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54065747_54065814_54100907_54100940_54101754
transcript_134450.known	chr8	+	1729	5	FSM	ENSG00000137547.9	ENST00000260102.9	1729	5	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_3	50.3115294937453	4640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTAGTGTTCAGCTCGATT	-4	True	NA	NA	False	NA	NA	NA	54135240	54148514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_54135392_54136510_54136666_54137267_54137434_54142662_54142787_54147381
transcript_134470.known	chr8	-	826	3	FSM	ENSG00000167904.16	ENST00000522576.5	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	65	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTGAAATAAGAAAATTT	34	False	55773397	-84	True	ATTAAA	-29	NA	55773378	55762399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55763029_55763935_55763981_55773226
transcript_134476.known	chr8	-	2573	8	FSM	ENSG00000167904.16	ENST00000434581.7	2573	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	16.2556112760851	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	34	False	55773397	-14	True	AATAAA	-1	NA	55773378	55738757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_134477.known	chr8	-	2401	6	FSM	ENSG00000167904.16	ENST00000334667.6	2401	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	49.3096339471305	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	5	True	NA	-14	True	AATAAA	-1	NA	55773407	55738757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55740219_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_134478.known	chr8	-	2400	3	FSM	ENSG00000167904.16	ENST00000521229.5	2400	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	21.5	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCATTTGAGTAGC	-24	True	NA	NA	False	ATTAAA	-18	NA	55773367	55760772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55763029_55763935_55763981_55773268
transcript_134479.known	chr8	-	2477	7	FSM	ENSG00000167904.16	ENST00000617782.4	2477	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	17.1601929541081	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCTTGAGAAATTACA	9432	False	NA	0	True	AATAAA	-15	NA	55763980	55738743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935
transcript_134480.known	chr8	-	1000	6	FSM	ENSG00000167904.16	ENST00000522090.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	43.5862363596583	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACTTGGAGGAACAAGTA	31	False	55773397	NA	False	NA	NA	NA	55773381	55745077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773226
transcript_134486.known	chr8	+	3159	11	FSM	ENSG00000137574.11	ENST00000523948.5	3159	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	78.0233939277189	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATATGTGTTGCTTAATT	17	True	NA	18	True	ATTAAA	-19	NA	55773469	55825448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_55773720_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55813054_55813119_55824580
transcript_134506.known	chr8	-	650	4	FSM	ENSG00000008988.11	ENST00000521262.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	4094.84719562959	3565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	NA	False	NA	-14	True	AATAAA	-19	NA	56074510	56073053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074253
transcript_134511.known	chr8	-	423	3	FSM	ENSG00000008988.11	ENST00000520627.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4477	4631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	NA	False	NA	-14	True	AATAAA	-19	NA	56074510	56073053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074380
transcript_134513.known	chr8	-	519	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_3	171.822259584982	219774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-1	True	NA	-14	True	AATAAA	-19	NA	56074506	56073053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
transcript_134514.known	chr8	-	1479	5	FSM	ENSG00000008988.11	ENST00000678683.1	1479	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3779.811263476	6797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATATTTTCACCAAGAG	NA	False	NA	NA	False	NA	NA	NA	56074510	56068810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56069381_56072667_56073273_56073694_56073769_56074059_56074160_56074380
transcript_134515.known	chr8	-	752	3	FSM	ENSG00000008988.11	ENST00000524349.5	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	8670	junction_2	142	3332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCAGAATACTGGCAG	-1	True	NA	-2	True	AATAAA	-31	NA	56074506	56073041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074059
transcript_134516.known	chr8	-	424	3	FSM	ENSG00000008988.11	ENST00000519606.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4271.5	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGACCAGTTGTTA	-1	True	NA	-35	True	NA	NA	NA	56074506	56073074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56074059_56074160_56074380
transcript_134517.known	chr8	-	712	5	FSM	ENSG00000008988.11	ENST00000618656.2	712	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4406.89405222091	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGAGATTTTGCCTT	361	False	NA	-8	True	AATAAA	-17	NA	56074144	56067253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56067520_56069702_56069834_56073116_56073273_56073694_56073769_56074059
transcript_134518.known	chr8	-	737	3	FSM	ENSG00000008988.11	ENST00000521289.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	8543	junction_2	205.5	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTTGAGGTGGAAGTCA	-1	True	NA	-87	True	NA	NA	NA	56074506	56073126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56074160_56074380
transcript_134519.nnic	chr8	-	1127	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	-608	0	-604	0	multi-exon	FALSE	canonical	3	8543	junction_3	171.822259584982	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	NA	False	NA	-14	True	AATAAA	-19	NA	56075114	56073053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
transcript_134522.known	chr8	-	1684	3	FSM	ENSG00000181690.8	ENST00000423799.6	1684	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCTTTTAAACTGAGC	-18	True	NA	NA	False	TATAAA	-6	NA	56211300	56166098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56167504_56171090_56171190_56211120
transcript_134530.known	chr8	+	1670	5	FSM	ENSG00000170791.18	ENST00000518801.5	1670	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	212.473968993851	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	9	False	NA	17	True	AATAAA	-20	NA	56211797	56218619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216532_56217330
transcript_134531.known	chr8	+	573	4	FSM	ENSG00000170791.18	ENST00000521831.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	202.000550054257	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTCAAGTGGAGA	NA	False	NA	54	True	NA	NA	NA	56211685	56217538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56214597_56214668_56216388_56216532_56217330
transcript_134532.known	chr8	+	1697	4	FSM	ENSG00000170791.18	ENST00000355315.8	1697	4	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	117.423260992966	2041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCTTGTTGAGTCTT	0	True	NA	NA	False	NA	NA	NA	56211788	56218809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56214597_56214668_56216432_56216532_56217330
transcript_134533.known	chr8	+	559	6	FSM	ENSG00000170791.18	ENST00000523667.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	102.041952156944	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAATGTTTGCATTAAA	0	True	NA	-20	True	NA	NA	NA	56211788	56217429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216507_56216679_56216755_56217330
transcript_134534.known	chr8	+	1805	5	FSM	ENSG00000170791.18	ENST00000523975.5	1805	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	220.813694095271	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCCTGATGCCACTCT	9	False	NA	NA	False	NA	NA	NA	56211797	56218798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216432_56216532_56217330
transcript_134535.known	chr8	+	552	6	FSM	ENSG00000170791.18	ENST00000521982.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	209.496157482661	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAAAAGTGTTTATATA	0	True	NA	-8	True	NA	NA	NA	56211788	56217441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56216679_56216755_56217330
transcript_134536.known	chr8	+	3157	3	FSM	ENSG00000170791.18	ENST00000522166.1	3157	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	246.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAGATGAATATTTCT	0	True	NA	16	True	ATTAAA	-17	NA	56211788	56217465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56214668_56216388_56216532_56217330
transcript_134537.known	chr8	+	567	6	FSM	ENSG00000170791.18	ENST00000523532.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	99.1596692209086	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGGAAATATGCCCTAT	0	True	NA	-37	True	NA	NA	NA	56211788	56217412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56216679_56216755_56217330
transcript_134538.known	chr8	-	2536	7	FSM	ENSG00000170786.13	ENST00000303749.8	2536	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.14087209644419	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTATTCCACTGTAGAT	-35	True	NA	NA	False	AATAAA	-21	NA	56320175	56300004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56301574_56305596_56305723_56306675_56306821_56308927_56309028_56312156_56312289_56316014_56316362_56320058
transcript_134540.known	chr8	-	2399	6	FSM	ENSG00000170786.13	ENST00000396721.6	2399	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.57681974534503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACATCTTATTCCACTG	-35	True	NA	NA	False	AATAAA	-16	NA	56320175	56300009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56301574_56305596_56305723_56306675_56306821_56308927_56309028_56316014_56316362_56320058
transcript_134541.known	chr8	-	1251	4	FSM	ENSG00000181195.11	ENST00000451791.7	1251	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCCTTGTAAGTCTCT	0	True	NA	NA	False	AATAAA	-19	NA	56446641	56440956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56441938_56445815_56445957_56446425_56446482_56446568
transcript_134542.known	chr8	-	438	2	FSM	ENSG00000181195.11	ENST00000520589.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAACTTTCAGTGTTTTCT	9512	False	NA	NA	False	AAGAAA	-6	NA	56438510	56436714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56437077_56438434
transcript_134543.known	chr8	+	403	1	FSM	ENSG00000241431.1	ENST00000464216.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19077	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCTACAGGCCAATTTT	-2	True	NA	NA	False	AATAAA	-34	NA	56588384	56588787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56588400_56588800
transcript_134545.known	chr8	+	1225	9	FSM	ENSG00000215114.10	ENST00000523409.5	1225	9	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_6	82.5831966867352	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCCAATCTGAATATA	20	True	NA	36	True	GATAAA	-21	NA	58411380	58447684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857_58434949_58439632_58439771_58445906_58446069_58447388
transcript_134550.known	chr8	+	4971	8	FSM	ENSG00000215114.10	ENST00000399598.7	4971	8	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_5	31.7753594690564	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGGTTTTTCAAATT	0	True	NA	13	True	AATAAA	-22	NA	58411360	58451501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58439632_58439771_58445906_58446069_58447388
transcript_13456.known	chr1	+	2997	9	FSM	ENSG00000143469.20	ENST00000367019.5	2997	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.46021477971127	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCTTGTGCCTTTCAT	102	False	NA	-93	True	GATAAA	-15	NA	209938173	210162223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209938278_209952708_209952757_210013632_210013798_210021038_210021255_210094321_210094594_210100011_210100462_210155720_210155911_210159420_210159478_210160728
transcript_134561.known	chr8	+	717	7	FSM	ENSG00000215114.10	ENST00000522978.1	717	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	94.650967008032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTTAGTTTGAAGT	-2	True	NA	NA	False	NA	NA	NA	58411358	58434941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58411470_58413298_58413372_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_134563.nic	chr8	+	822	6	ISM	ENSG00000215114.10	ENST00000523409.5	1225	9	-35	12578	-13	0	5prime_fragment	FALSE	canonical	3	73	junction_5	71.4769893042509	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAAGTGGAGTTATTTC	-15	True	NA	NA	False	AATAAA	-27	NA	58411345	58435106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_134578.known	chr8	+	2073	9	FSM	ENSG00000137575.12	ENST00000260130.9	2073	9	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_4	95.6607776207156	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	11	True	NA	27	True	AATAAA	-19	NA	58553260	58582858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_13458.known	chr1	-	591	2	FSM	ENSG00000203706.8	ENST00000475406.5	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	1188	False	NA	1	True	AATAAA	-35	NA	210232972	210231455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_210231772_210232697
transcript_134582.known	chr8	+	3589	10	FSM	ENSG00000137575.12	ENST00000523483.5	3589	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	457.733816659399	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	4	True	NA	27	True	AATAAA	-19	NA	58553253	58582858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58553304_58560283_58561796_58565018_58565085_58570886_58570966_58572204_58572315_58575902_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_134583.known	chr8	-	3574	31	FSM	ENSG00000035681.9	ENST00000038176.8	3574	31	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_30	19.9805738989983	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTTTTCACTTTAT	-44	True	NA	NA	False	ATTAAA	-17	NA	58659853	58583507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_134584.known	chr8	-	4076	9	FSM	ENSG00000198846.6	ENST00000361421.2	4076	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.3888811036348	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGGTGATCCATCA	-10	True	NA	1	True	AATAAA	-44	NA	59119147	58805411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_58807784_58808117_58808270_58815337_58815725_58826821_58826903_58838080_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
transcript_134585.nic	chr8	-	1003	5	ISM	ENSG00000198846.6	ENST00000361421.2	4076	9	-88	32838	-88	-32838	5prime_fragment	FALSE	canonical	3	71	junction_1	10.0124921972504	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGGATCCCA	-12	True	NA	NA	False	NA	NA	NA	59119235	58838249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
transcript_134589.known	chr8	+	3207	2	FSM	ENSG00000167912.7	ENST00000665670.1	3207	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATGCAATAAGTAATATC	1	True	NA	NA	False	TTTAAA	-14	NA	59119221	59123478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_59119286_59120335
transcript_13459.known	chr1	-	726	2	FSM	ENSG00000203706.8	ENST00000437764.5	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	116	False	NA	1	True	AATAAA	-35	NA	210234044	210231455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_210231772_210233634
transcript_134592.known	chr8	+	1106	2	FSM	ENSG00000167912.7	ENST00000517898.1	1106	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTTTAAAAATAAAACTT	19	False	NA	-30	True	NA	NA	NA	59119945	59121315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_59120072_59120335
transcript_134595.known	chr8	-	5735	9	FSM	ENSG00000178538.10	ENST00000317995.5	5735	9	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	6.14410286372225	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGACTATTCATTTC	-3	True	NA	0	True	ATTAAA	-22	NA	60281400	60185411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_60189986_60208749_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_134597.known	chr8	-	1825	8	FSM	ENSG00000178538.10	ENST00000524872.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	5.32993088747932	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTATTTATTTACC	12	False	NA	NA	False	AATAAA	-43	NA	60281385	60208070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_134611.known	chr8	-	2063	3	FSM	ENSG00000251396.8	ENST00000656656.1	2063	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGCTGCGTGCTGTGGCT	-9	True	NA	NA	False	AATGAA	-4	NA	60516787	60403492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_60405250_60508646_60508763_60516597
transcript_134613.known	chr8	-	568	3	FSM	ENSG00000251396.8	ENST00000532232.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATTACAATAAGCTGT	-17	True	NA	NA	False	NA	NA	NA	60516795	60468862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_60469117_60508646_60508763_60516597
transcript_134614.known	chr8	+	3735	8	FSM	ENSG00000104388.15	ENST00000262646.12	3735	8	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_5	92.5511441621025	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGATGTACTAGGTATTA	13	True	NA	24	True	AATAAA	-34	NA	60516986	60623644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_134615.known	chr8	+	680	7	FSM	ENSG00000104388.15	ENST00000529579.5	680	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	391.630211069348	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTCTTGTATAACTTTG	-2	True	NA	-34	True	NA	NA	NA	60517180	60620895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60618579_60618649_60620673
transcript_134617.known	chr8	+	11606	38	FSM	ENSG00000171316.12	ENST00000423902.7	11606	38	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_14	32.4600333005063	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGTAGTATTGGAAA	-3	True	NA	23	True	AATAAA	-30	NA	60678739	60868028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854362_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
transcript_134625.known	chr8	-	3730	14	FSM	ENSG00000198363.18	ENST00000356457.9	3730	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	115.168104558911	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	8462	False	61714610	NA	False	AATAAA	-20	NA	61714596	61623709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_134628.known	chr8	-	6337	4	FSM	ENSG00000198363.18	ENST00000517856.5	6337	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	198.005050440639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGACTGAATTGAGCTT	8471	False	61714610	-9	True	AATAAA	-20	NA	61714587	61656127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61661927_61680967_61681037_61684038_61684189_61714268
transcript_134629.known	chr8	-	5301	25	FSM	ENSG00000198363.18	ENST00000379454.9	5301	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	132.465063528296	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATTTCTAGTCTTCT	8466	False	61714610	-6	True	AATAAA	-19	NA	61714592	61500555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61503510_61517527_61517662_61518031_61518124_61525976_61526113_61548070_61548209_61553030_61553121_61555923_61556023_61562743_61562881_61567167_61567319_61576771_61576859_61583943_61584030_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_134630.known	chr8	+	20374	7	FSM	ENSG00000185942.13	ENST00000623646.3	20374	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.19215773966098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACTACTGTTTTTAATA	2	True	NA	NA	False	AATAAA	-20	NA	62248853	62984904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_62249128_62579538_62579677_62589713_62589795_62746931_62747130_62918452_62918514_62953901_62953973_62965353
transcript_134632.known	chr8	+	2627	3	FSM	ENSG00000185942.13	ENST00000676150.1	2627	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTCGTAGAGAATAATCT	NA	False	NA	NA	False	AATAAA	-2	NA	62579538	62636595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_62579677_62589713_62589795_62634187
transcript_134635.known	chr8	-	1248	9	FSM	ENSG00000137563.13	ENST00000260118.7	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	38.7151052562175	2221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTCTAATTGATTTG	25	True	NA	-15	True	AATAAA	-17	NA	63038806	63015078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_63015454_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_134636.known	chr8	-	961	8	FSM	ENSG00000137563.13	ENST00000518113.2	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	161.515779225361	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAGTTGAGTGGAA	30	True	NA	-5	True	AATAAA	-17	NA	63038801	63023508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_63023740_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_134637.known	chr8	-	718	1	FSM	ENSG00000270673.1	ENST00000603538.1	718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTCCATGGAAGGAA	226	False	NA	NA	False	AATAAA	-25	NA	63168442	63167724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_63167700_63168400
transcript_134638.known	chr8	+	2370	6	FSM	ENSG00000185728.17	ENST00000621413.4	2370	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	209.505703979629	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGTAATTATGCAT	0	True	NA	NA	False	NA	NA	NA	63168660	63209955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_63168902_63169386_63169412_63172652_63172799_63175330_63175417_63186146_63187746_63209682
transcript_134641.known	chr8	+	2387	5	FSM	ENSG00000185728.17	ENST00000621957.4	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	177.450521272833	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTCGATTTTTAGCT	26	True	NA	NA	False	NA	NA	NA	63168651	63210115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_63168902_63169386_63169412_63175336_63175417_63186146_63187746_63209682
transcript_134646.nnic	chr8	+	5062	5	NNC	ENSG00000185728.17	novel	5095	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	173.994791588714	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGTTCTTTCCATTT	1	True	NA	12	True	AATAAA	-14	NA	63168566	63212786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_63168815_63169386_63169412_63175330_63175417_63186146_63187746_63209682
transcript_134657.known	chr8	+	1000	2	FSM	ENSG00000254377.7	ENST00000520799.5	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGTACCAGAGGGGTAA	19	False	NA	NA	False	AGTAAA	-21	NA	64373327	64378834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_64373552_64378058
transcript_134659.known	chr8	-	3000	7	FSM	ENSG00000104442.10	ENST00000276569.8	3000	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	9.81070843517429	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTGTGGTATAAGCAT	-12	True	NA	-18	True	AATAAA	-32	NA	65634177	65602457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65613243_65613434_65622262_65622355_65627215_65627434_65633997
transcript_134663.known	chr8	-	887	6	FSM	ENSG00000104442.10	ENST00000528721.5	887	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.9334968921813	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGTGTGAACCAACAAGG	-6	True	NA	NA	False	NA	NA	NA	65634171	65604374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65622262_65622355_65627215_65627434_65633997
transcript_134667.nic	chr8	-	871	3	ISM	ENSG00000104442.10	ENST00000528721.5	887	6	-67	17568	-21	-8605	5prime_fragment	FALSE	canonical	3	154	junction_1	6	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATTTTAGGTAGAGAA	NA	False	NA	NA	False	NA	NA	NA	65634238	65621942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_65622355_65627215_65627434_65633997
transcript_134670.known	chr8	+	2651	8	FSM	ENSG00000066855.16	ENST00000262146.9	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	16.6451561870052	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCTTCCATTTTTT	10	True	NA	16	True	AATAAA	-29	NA	65644733	65710562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_65644785_65669872_65670019_65682352_65682452_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
transcript_134671.known	chr8	-	6961	13	FSM	ENSG00000205268.11	ENST00000401827.8	6961	13	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	34.3725504177712	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATTAATGTGTTCCC	-1	True	NA	NA	False	AATAAA	-20	NA	65842064	65714333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
transcript_134673.known	chr8	+	956	2	FSM	ENSG00000253190.4	ENST00000517961.3	956	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGTATGCTTTTGTTA	-1	True	NA	NA	False	AATAAA	-24	NA	66113286	66115207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66113597_66114561
transcript_134674.known	chr8	+	1972	14	FSM	ENSG00000147576.17	ENST00000396623.8	1972	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	12.2498641460889	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCCATAATATACTGGG	8	True	NA	111	True	AATAAA	-23	NA	66432503	66468907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66432576_66440161_66440200_66442797_66442845_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66454058_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_134679.known	chr8	+	2179	13	FSM	ENSG00000147576.17	ENST00000426810.5	2179	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	10.7651701746368	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGTATTCATTATTGG	5	True	NA	13	True	AATAAA	-14	NA	66432500	66468809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66432576_66440161_66440200_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_13468.known	chr1	+	4474	12	FSM	ENSG00000117625.14	ENST00000419091.7	4474	12	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	24.1239910078901	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTAATGTAGGCCT	-19	True	NA	7	True	AATAAA	-18	NA	211259365	211316385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719_211312962_211313423
transcript_134680.known	chr8	+	1830	13	FSM	ENSG00000147576.17	ENST00000276576.11	1830	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	11.5458025080787	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTAAGTATTCATTATT	3	True	NA	11	True	AATAAA	-12	NA	66432498	66468807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66432576_66440161_66440200_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66454058_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_134682.known	chr8	+	1979	12	FSM	ENSG00000147576.17	ENST00000419955.5	1979	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.5858277632061	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGTATTCATTATTGG	17	True	NA	13	True	AATAAA	-14	NA	66432512	66468809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66432576_66442797_66442845_66444366_66444421_66444593_66444749_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_134686.known	chr8	+	1720	1	FSM	ENSG00000179041.4	ENST00000320270.4	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACTGGGTAGA	-47	True	NA	34	True	AATAAA	-27	NA	66429013	66430733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66429000_66430700
transcript_134687.known	chr8	+	515	6	FSM	ENSG00000147576.17	ENST00000443372.5	515	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	10.5261578935526	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATCCCATCACACGGC	12	True	NA	NA	False	NA	NA	NA	66432507	66452006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66432576_66444366_66444421_66444593_66444749_66447263_66447342_66448864_66448971_66451952
transcript_134688.known	chr8	-	9956	3	FSM	ENSG00000175073.8	ENST00000310421.5	9956	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	10	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTTAATTGATTTT	-8	True	NA	2	True	ATTAAA	-22	NA	66667231	66628486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66635373_66651457_66651545_66664248
transcript_134692.nic	chr8	+	647	2	ISM	ENSG00000288596.2	ENST00000521113.1	575	3	-54	5338	-54	-774	5prime_fragment	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATTGGTATGAAAATGAAA	0	True	NA	NA	False	AATAAA	-17	NA	66667560	66680226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_66667702_66679720
transcript_134693.nnic	chr8	+	191	2	NIC	ENSG00000288596.2	novel	598	4	NA	NA	-25	2	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGTTTGTGTTTTTTT	-9	True	NA	8	True	AATAAA	-17	NA	66667589	66678297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_66667702_66678218
transcript_134697.nnic	chr8	+	424	4	NNC	ENSG00000288596.2	novel	598	4	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.3061758225833	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	368	False	NA	6	True	AATAAA	-15	NA	66667551	66678295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_66667702_66676744_66676903_66677641_66677681_66678218
transcript_134699.known	chr8	+	598	4	FSM	ENSG00000288596.2	ENST00000521889.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	12.2565175405668	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	53	False	NA	6	True	AATAAA	-15	NA	66667651	66678295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66667702_66676744_66676903_66677641_66677955_66678218
transcript_134703.nic	chr8	+	946	4	NIC	ENSG00000288596.2	novel	575	3	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	7.03957069398096	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	-4	True	NA	18	True	AATAAA	-19	NA	66667556	66685564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_66667702_66677641_66677955_66679720_66680025_66685380
transcript_134704.nnic	chr8	+	760	4	NNC	ENSG00000288596.2	novel	575	3	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.05536398239638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTAATGTTAATCGTT	0	True	NA	14	True	AATAAA	-15	NA	66667560	66685560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_66667702_66679720_66680025_66680323_66680459_66685380
transcript_134705.nic	chr8	+	691	4	NIC	ENSG00000288596.2	novel	732	3	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	7.54247233265651	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTAATGTTAATCGTT	0	True	NA	14	True	AATAAA	-15	NA	66667560	66685560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_66667702_66679720_66680025_66680392_66680459_66685380
transcript_134707.nic	chr8	+	962	3	ISM	ENSG00000288596.2	ENST00000521889.5	598	4	-100	0	-63	0	intron_retention	FALSE	canonical	3	19	junction_2	8	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	368	False	NA	6	True	AATAAA	-15	NA	66667551	66678295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_66667702_66676744_66676903_66677641
transcript_13471.known	chr1	+	1827	11	FSM	ENSG00000117625.14	ENST00000452621.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	25.2430188368983	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTTATGTTTTTGT	3	True	NA	13	True	AATAAA	-23	NA	211259387	211313298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719
transcript_134710.nic	chr8	+	535	3	NIC	ENSG00000288596.2	novel	598	4	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	8.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	-4	True	NA	6	True	AATAAA	-15	NA	66667556	66678295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_66667702_66677641_66677955_66678218
transcript_134711.known	chr8	+	1835	3	FSM	ENSG00000288596.2	ENST00000661636.1	1835	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTATATTACAAAGAAT	19	True	NA	NA	False	AAAAAG	-9	NA	66667617	66681158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66667702_66677641_66677955_66679720
transcript_134713.known	chr8	+	575	3	FSM	ENSG00000288596.2	ENST00000521113.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	3.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	16	True	NA	18	True	AATAAA	-19	NA	66667614	66685564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66667702_66679720_66680025_66685380
transcript_134715.nic	chr8	+	799	2	ISM	ENSG00000288596.2	ENST00000661636.1	1835	3	-61	2863	-58	0	5prime_fragment	FALSE	canonical	3	22	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	-4	True	NA	6	True	AATAAA	-15	NA	66667556	66678295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_66667702_66677641
transcript_134717.known	chr8	+	4106	17	FSM	ENSG00000104205.16	ENST00000521198.7	4106	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	16.593955978006	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTGTCATTATTTG	11	True	NA	6	True	AATAAA	-18	NA	66712780	66862022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66712834_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_134718.known	chr8	+	4190	17	FSM	ENSG00000104205.16	ENST00000396596.2	4190	17	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	9.06831709855803	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	-40	True	NA	4	True	AATAAA	-16	NA	66775180	66862020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_134726.known	chr8	+	4055	16	FSM	ENSG00000104205.16	ENST00000345714.8	4055	16	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	9.34427929567367	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTGTCATTATTTG	5858	False	NA	6	True	AATAAA	-18	NA	66793613	66862022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_134727.known	chr8	+	1831	9	FSM	ENSG00000178460.18	ENST00000492775.5	1831	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.707106781186548	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTGAACAGATTATGT	8	True	NA	NA	False	AATAAA	-18	NA	66870789	66884622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66870832_66874052_66874235_66874325_66874457_66874526_66874587_66877348_66877545_66878573_66878697_66878814_66878920_66880848_66880975_66883756
transcript_13474.known	chr1	+	4246	11	FSM	ENSG00000117625.14	ENST00000367005.8	4246	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	18.8703471086252	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTAATGTAGGCCT	11	True	NA	7	True	AATAAA	-18	NA	211259974	211316385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719_211312962_211313423
transcript_134740.known	chr8	-	479	4	FSM	ENSG00000245910.9	ENST00000520619.1	479	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	417.567825495319	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACATCACAATAAATTATG	NA	False	NA	-106	True	NA	NA	NA	66926398	66922017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66926197
transcript_134745.known	chr8	-	302	3	FSM	ENSG00000245910.9	ENST00000521399.6	366	3	4	60	0	-1	multi-exon	FALSE	canonical	3	197	junction_2	312	3276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGCTAACTTTTAAT	-3	True	NA	-75	True	AATAAA	-17	NA	66925541	66921986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66922115_66922323_66922393_66925436
transcript_134747.known	chr8	-	560	2	FSM	ENSG00000245910.9	ENST00000521127.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGGGTGGGGGCAG	-3	True	NA	NA	False	NA	NA	NA	66925541	66922270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66922726_66925436
transcript_134748.known	chr8	-	714	2	FSM	ENSG00000261787.2	ENST00000566129.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGCAGTAATATGAAGA	7466	False	NA	NA	False	AAGAAA	-2	NA	66955117	66947589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66948165_66954978
transcript_134750.known	chr8	+	4476	30	FSM	ENSG00000104218.16	ENST00000262210.11	4476	30	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	17.1753217313535	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTAACTACTATGGAG	4956	False	NA	8	True	AATAAA	-22	NA	67064339	67196263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_134753.known	chr8	+	3844	26	FSM	ENSG00000104218.16	ENST00000677009.1	3844	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_25	16.2281730333393	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAATTAATTATTATTTC	-23	True	NA	NA	False	NA	NA	NA	67064361	67196047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112066_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67195381
transcript_134756.known	chr8	+	1991	15	FSM	ENSG00000104218.16	ENST00000678728.1	1991	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	16.2971451112	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGTTATTTCTACTGACT	-7	True	NA	NA	False	NA	NA	NA	67064377	67137603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112076_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455
transcript_134757.known	chr8	+	3822	25	FSM	ENSG00000104218.16	ENST00000678318.1	3822	25	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	19.9457597833057	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATTTTTATGCCAATGAA	-17	True	NA	-87	True	NA	NA	NA	67064367	67196168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_134762.known	chr8	+	3634	23	FSM	ENSG00000104218.16	ENST00000676573.1	3634	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	19.6329963442809	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTAACTACTTCTTGATA	-17	True	NA	-41	True	AATGAA	-27	NA	67064367	67196214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67064497_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390_67164509_67172415_67172556_67175295_67175437_67177679_67177727_67179862_67179927_67190649_67190760_67193463_67193603_67195381
transcript_134767.known	chr8	+	2489	19	FSM	ENSG00000104218.16	ENST00000678362.1	2489	19	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	15.1029389667077	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAGAAAGAAGAAGAA	14	True	NA	NA	False	AAAAAG	-10	NA	67064398	67159051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67093542_67093642_67095292_67095733_67103036_67103136_67105904_67105976_67111971_67112076_67113804_67113863_67115913_67116123_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990
transcript_134770.nic	chr8	-	1433	9	NIC	ENSG00000121022.14	novel	1451	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	201.007112747286	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	NA	False	NA	NA	False	AATAAA	-17	NA	67062351	67043078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853_67062025_67062105
transcript_134778.known	chr8	-	1084	6	FSM	ENSG00000178125.15	ENST00000324682.5	1084	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.632455532033676	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGAACTTGCTGACCT	2	True	NA	NA	False	AATAAA	-17	NA	67028551	66988130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66988518_67010714_67010832_67012957_67013097_67014425_67014593_67017618_67017832_67028490
transcript_134783.known	chr8	-	400	3	FSM	ENSG00000178125.15	ENST00000520633.1	400	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTGGATTTGTTCTAA	16	True	NA	NA	False	AATAAA	-17	NA	67028537	67010617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_67010832_67012957_67013097_67028490
transcript_134784.known	chr8	-	1296	8	FSM	ENSG00000121022.14	ENST00000357849.9	1296	8	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	26.1080955464244	6737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	5	True	NA	NA	False	AATAAA	-17	NA	67062133	67043078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853
transcript_134785.known	chr8	-	7320	39	FSM	ENSG00000066777.9	ENST00000262215.8	7320	39	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_29	41.0610399621111	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	2	True	NA	-14	True	AATAAA	-33	NA	67343781	67197657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_13479.nic	chr1	+	1806	10	ISM	ENSG00000117625.14	ENST00000452621.6	1827	11	402	0	-157	0	3prime_fragment	FALSE	canonical	3	146	junction_4	19.8910613338669	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTTATGTTTTTGT	236	False	NA	13	True	AATAAA	-23	NA	211259789	211313298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719
transcript_134793.nnic	chr8	+	1952	3	Genic_Genomic	ENSG00000271966.1	novel	1113	1	NA	NA	-29	30167	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAACTGTGGTATTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	67343945	67375254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_+_67344303_67345126_67345182_67373714
transcript_134794.known	chr8	+	1113	1	FSM	ENSG00000271966.1	ENST00000607397.1	1113	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATTTCTTTTATTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	67343974	67345087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67344000_67345100
transcript_134797.known	chr8	+	550	2	FSM	ENSG00000255130.1	ENST00000526382.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGCAGTCTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	67732586	67735665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67732666_67735194
transcript_1348.known	chr1	-	939	3	FSM	ENSG00000231789.3	ENST00000415330.3	978	3	18	21	18	-21	multi-exon	FALSE	canonical	1	1	junction_1	40.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGCATTTCTCATCCTA	16	True	NA	-21	True	AATAAA	-12	NA	9687555	9672425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9672720_9680711_9681136_9687334
transcript_134800.nnic	chr8	+	2717	19	NNC	ENSG00000046889.19	novel	3612	24	NA	NA	-17	-20616	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_18	15.8823801742686	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTATTCTAATGTATG	-3	True	NA	4	True	AATAAA	-15	NA	67952350	68085391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_67952536_68017845_68017918_68019548_68019672_68022035_68022141_68027221_68027324_68030496_68030659_68038158_68038293_68044486_68044591_68053096_68053247_68055829_68055975_68060678_68060780_68069032_68069137_68069834_68069885_68072494_68072571_68077396_68077470_68080442_68080586_68080745_68080839_68083239_68083389_68084745
transcript_134801.known	chr8	+	10824	40	FSM	ENSG00000046889.19	ENST00000288368.5	10824	40	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_38	15.1225543553367	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTTCTTTCCATTTAA	-15	True	NA	16	True	AATAAA	-21	NA	67952045	68237032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67952536_68017845_68017918_68019548_68019672_68022035_68022141_68027221_68027324_68030496_68030659_68038158_68038293_68044486_68044591_68053096_68053247_68055829_68055975_68060678_68060780_68069032_68069137_68069834_68069885_68072494_68072571_68077396_68077470_68080442_68080586_68080745_68080839_68083239_68083389_68087723_68087810_68090578_68090716_68093604_68093723_68097016_68097202_68099681_68099844_68108108_68108332_68109415_68109624_68115752_68115933_68118549_68118645_68119431_68119515_68120195_68120287_68120920_68121050_68127377_68127420_68134058_68134277_68138414_68138518_68146208_68146353_68157321_68157437_68191721_68191789_68192334_68192526_68217615_68217719_68224558_68224627_68231332
transcript_134805.nic	chr8	+	1055	3	ISM	ENSG00000046889.19	ENST00000529398.5	3612	24	-17	85661	-17	-85661	5prime_fragment	FALSE	canonical	3	86	junction_1	10.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTATGCTGCTACG	-3	True	NA	NA	False	ACTAAA	-27	NA	67952350	68020346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_67952536_68017845_68017918_68019548
transcript_134806.known	chr8	+	425	3	FSM	ENSG00000046889.19	ENST00000522247.5	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCAGGTGTATTTGGAAT	NA	False	NA	22	True	ATTAAA	-17	NA	68157374	68192630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_68157437_68191721_68191789_68192334
transcript_134812.known	chr8	-	1684	4	FSM	ENSG00000248801.7	ENST00000512294.7	1684	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.71404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCATTGAATAAAAATG	NA	False	NA	-38	True	NA	NA	NA	68331509	68303505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_68304802_68306517_68306599_68308859_68308964_68331306
transcript_134814.known	chr8	-	2842	3	FSM	ENSG00000248801.7	ENST00000660308.1	2842	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCATTATGAAATG	NA	False	NA	-15	True	AATGAA	-9	NA	68331511	68302245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_68304802_68306517_68306599_68331306
transcript_134816.known	chr8	-	390	1	FSM	ENSG00000236191.3	ENST00000489168.1	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATACTTACA	NA	False	NA	NA	False	NA	NA	NA	68525906	68525516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_68525500_68525900
transcript_13482.known	chr1	+	2525	11	FSM	ENSG00000117625.14	ENST00000367006.8	2525	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	50.5213816121452	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTTGGTTTTTTTTGTT	3	True	NA	13	True	AATATA	-23	NA	211259278	211314591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211313423
transcript_134826.known	chr8	+	1256	2	FSM	ENSG00000246528.4	ENST00000528800.3	1298	2	39	3	-24	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTTTCCTGATCTTC	9	True	NA	NA	False	AATAAA	-21	NA	69834128	69837829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_69834194_69836638
transcript_134827.known	chr8	+	828	2	FSM	ENSG00000246528.4	ENST00000501104.3	1315	2	24	463	21	-462	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACATTCAGCAAGAAGC	-9	True	NA	NA	False	AAAAAG	-42	NA	69834110	69837370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_69834207_69836638
transcript_13484.nnic	chr1	+	752	3	NNC	ENSG00000117625.14	novel	452	3	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	55	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTGGAGAGAAACAAT	-16	True	NA	17	True	ATTAAA	-14	NA	211259368	211261202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_211259727_211260107_211260165_211260865
transcript_134843.known	chr8	-	2269	8	FSM	ENSG00000147596.4	ENST00000276594.3	2269	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_6	33.5297613764128	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTCCAACACTTTGGGA	-3	True	NA	NA	False	NA	NA	NA	70071252	70051650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70069160_70069885_70071149
transcript_13485.known	chr1	+	452	3	FSM	ENSG00000117625.14	ENST00000472734.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	48	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTGGAGAGAAACAAT	52	False	NA	17	True	ATTAAA	-14	NA	211259605	211261202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211259727_211260107_211260165_211260928
transcript_134850.nnic	chr8	-	2455	7	NIC	ENSG00000147596.4	novel	2269	8	NA	NA	-75	835	combination_of_known_splicesites	FALSE	canonical	3	45	junction_6	91.6468160324672	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAGAAAAACTAG	-4	True	NA	NA	False	NA	NA	NA	70071327	70050815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70071149
transcript_134862.nic	chr8	-	2437	11	ISM	ENSG00000140396.13	ENST00000452400.7	8430	23	-32	46363	-32	-174	5prime_fragment	FALSE	canonical	3	25	junction_10	11.8894911581615	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGCACTACTTCGCTA	368	False	NA	NA	False	ATTAAA	-28	NA	70403840	70156144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70403699
transcript_134867.known	chr8	-	8430	23	FSM	ENSG00000140396.13	ENST00000452400.7	8430	23	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	12.6361183756447	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	1	True	NA	-19	True	AATAAA	-22	NA	70403808	70109781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70144641_70144849_70148272_70148484_70155970_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70403699
transcript_134868.known	chr8	+	2367	4	FSM	ENSG00000253967.1	ENST00000520259.1	2367	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCTCTGCGTTCAC	39	False	NA	NA	False	AATAAA	-43	NA	70471133	70485687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_70471846_70478092_70478164_70480721_70481309_70484690
transcript_134871.known	chr8	-	3056	11	FSM	ENSG00000067167.8	ENST00000262213.7	3056	11	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	67.9694784443724	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGGTGTCTCTTTATT	-1	True	NA	NA	False	AATAAA	-26	NA	70608416	70573217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
transcript_134872.known	chr8	-	542	6	FSM	ENSG00000067167.8	ENST00000520700.1	542	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	381.759400670108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATTTTGTAGTGTTAA	-24	True	NA	NA	False	AAAAAG	-5	NA	70608352	70594500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608262
transcript_134876.known	chr8	-	1526	7	FSM	ENSG00000147592.9	ENST00000276590.5	1526	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	33.304987948087	844	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGATAAATAATTATT	-3	True	NA	94	True	ATTAAA	-17	NA	70669185	70637265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70637904_70638547_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_134878.known	chr8	+	3200	5	FSM	ENSG00000221947.8	ENST00000408926.8	3200	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	2.48746859276655	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	-32	True	NA	NA	False	AATAAA	-23	NA	70669338	70735942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_70669539_70674817_70674900_70680780_70681331_70706932_70707154_70733795
transcript_134885.nnic	chr8	-	493	3	NNC	ENSG00000104313.20	novel	837	2	NA	NA	-84	2834	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACATACTTGATGTTCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	71592109	71565338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_71565470_71568724_71568928_71591950
transcript_13489.known	chr1	+	1022	7	FSM	ENSG00000117625.14	ENST00000529572.5	1022	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	74.0577852460871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTGATTATGATCCCA	-17	True	NA	NA	False	AAGAAA	-20	NA	211259946	211279276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211260165_211271231_211271310_211271527_211271875_211274209_211274263_211276256_211276419_211278116_211278242_211279237
transcript_13490.known	chr1	+	3972	11	FSM	ENSG00000082512.15	ENST00000336184.6	3972	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.2864205691783	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACGAGTTGTGATTTT	0	True	NA	19	True	AGTAAA	-16	NA	211326614	211374940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211326674_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
transcript_134908.known	chr8	+	808	2	FSM	ENSG00000254277.2	ENST00000519840.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTTTGTGTTTTCAGT	14	False	NA	NA	False	NA	NA	NA	71675299	71702786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_71675536_71702214
transcript_134909.known	chr8	+	473	3	FSM	ENSG00000254277.2	ENST00000521131.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	50.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGAAACAACAAAAATGT	23	False	NA	NA	False	AGTAAA	-15	NA	71675376	71702435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_71675536_71695940_71696034_71702214
transcript_13491.known	chr1	+	3976	11	FSM	ENSG00000082512.15	ENST00000261464.10	3976	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	24.3918019014586	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGTGATTTTTGTTTT	15	True	NA	25	True	AGTAAA	-22	NA	211326832	211374946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
transcript_134911.known	chr8	+	5653	4	FSM	ENSG00000235531.11	ENST00000656742.1	5653	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAATGTAGATTGACTT	-20	True	NA	NA	False	ATTAAA	-24	NA	71844113	71971833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_71844423_71962922_71963049_71965408_71965535_71966741
transcript_134912.known	chr8	+	4276	4	FSM	ENSG00000235531.11	ENST00000655314.1	4276	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTATTTCCTCCCACC	43	False	NA	NA	False	AATATA	-28	NA	71844038	72056178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_71844423_71962922_71963049_71965408_71965535_72052538
transcript_134913.known	chr8	-	1956	2	FSM	ENSG00000178860.9	ENST00000325509.5	1956	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTTGGAGGTGTCAGG	3	True	NA	-17	True	AATAAA	-43	NA	71844412	71841559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_71842748_71843644
transcript_134914.known	chr8	-	5191	27	FSM	ENSG00000104321.11	ENST00000262209.5	5191	27	0	0	0	0	multi-exon	FALSE	canonical	2	73	junction_20	15.7651026491571	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTCACCAACCTGTACT	-1	True	NA	-32	True	AATAAA	-16	NA	72075584	72021249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_72023117_72023813_72023912_72025959_72026074_72029900_72029970_72033643_72033827_72034247_72034378_72036287_72036458_72037982_72038073_72038864_72039028_72039726_72039798_72046512_72046609_72047147_72047208_72050777_72050872_72052598_72052766_72053752_72053868_72055435_72055601_72055685_72055856_72056916_72057018_72057716_72057817_72059389_72059439_72061624_72061762_72062798_72062945_72063462_72063572_72065450_72065559_72069022_72069199_72071710_72071868_72075298
transcript_134917.nnic	chr8	-	2465	11	NNC	ENSG00000104321.11	novel	5191	27	NA	NA	766	923	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_10	36.7009536660834	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTATCCCTGTGATTAT	NA	False	NA	-16	True	AATAAA	-12	NA	72040579	72022205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_72023117_72023813_72023912_72025959_72026074_72029900_72029970_72033643_72033827_72034247_72034378_72036287_72036458_72037982_72038073_72038864_72039028_72039726_72039798_72040113
transcript_134920.nic	chr8	-	1438	9	ISM	ENSG00000104321.11	ENST00000262209.5	5191	27	0	36297	0	-4158	5prime_fragment	FALSE	canonical	2	73	junction_2	14.1371629049113	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTCTGTCCAGTAAGG	-1	True	NA	NA	False	AATAAA	-24	NA	72075584	72057546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_72057817_72059389_72059439_72061624_72061762_72062798_72062945_72063462_72063572_72065450_72065559_72069022_72069199_72071710_72071868_72075298
transcript_134924.nic	chr8	-	550	2	ISM	ENSG00000104321.11	ENST00000262209.5	5191	27	-203	50557	-203	-18418	5prime_fragment	FALSE	canonical	3	114	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGACGATATGGACACC	NA	False	NA	NA	False	ATTAAA	-3	NA	72075787	72071806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_72071868_72075298
transcript_134931.known	chr8	+	2933	10	FSM	ENSG00000147601.15	ENST00000678997.1	2933	10	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	3317.8160152593	5211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCTATATATAAACAGAA	-7	True	NA	-13	True	NA	NA	NA	73008863	73047711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73012855_73012932_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_13495.nic	chr1	+	895	9	ISM	ENSG00000082512.15	ENST00000261464.10	3976	11	-11	5458	-11	-3307	5prime_fragment	FALSE	canonical	3	58	junction_8	20.9161271510765	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATCCAGCAGCTAGCA	4	True	NA	NA	False	AAGAAA	-1	NA	211326821	211369488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451
transcript_134968.known	chr8	+	3268	9	FSM	ENSG00000147601.15	ENST00000276602.10	3268	9	0	0	0	0	multi-exon	FALSE	canonical	3	5990	junction_6	809.648756792104	17456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCAGTCTGAGTAT	-7	True	NA	2	True	AATATA	-14	NA	73008863	73048122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_134969.known	chr8	+	3329	10	FSM	ENSG00000147601.15	ENST00000276603.10	3329	10	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_7	2548.68935574714	9846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCAGTCTGAGTATT	-7	True	NA	3	True	AATATA	-15	NA	73008863	73048123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73045960
transcript_13497.known	chr1	+	786	7	FSM	ENSG00000153363.14	ENST00000662549.1	786	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	107.019338854662	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTTTGAAGGCCC	-38	True	NA	9	True	AATAAA	-15	NA	211382776	211432535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211394951_211395002_211396766_211396832_211426210_211426284_211432318
transcript_134970.known	chr8	+	4052	4	FSM	ENSG00000147601.15	ENST00000678358.1	4052	4	0	0	0	0	multi-exon	FALSE	canonical	3	8043	junction_1	360.674676436012	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCTGAGATTGCGCCACT	-15	True	NA	NA	False	NA	NA	NA	73008855	73025699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215
transcript_134971.known	chr8	+	2331	6	FSM	ENSG00000147601.15	ENST00000522018.2	2331	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_5	3316.29190512536	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCACTCCCAGCTTAAAA	-7	True	NA	NA	False	AATAAA	-8	NA	73008863	73028477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026943
transcript_134972.known	chr8	+	2715	10	FSM	ENSG00000147601.15	ENST00000678860.1	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_8	3285.44899688172	10916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	-7	True	NA	-22	True	AATAAA	-7	NA	73008863	73047479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73038705_73038796_73039115_73039220_73045960
transcript_134973.known	chr8	+	801	5	FSM	ENSG00000147601.15	ENST00000518874.6	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	3542.56047054951	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTAATTTAATCAATTT	6	True	NA	65	True	AAAAAG	-1	NA	73008876	73027052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73020683_73020806_73022215_73022303_73024821_73024972_73026939
transcript_134974.known	chr8	+	2764	11	FSM	ENSG00000147601.15	ENST00000679115.1	2764	11	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_9	3471.85651921274	4778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	-11	True	NA	-22	True	AATAAA	-7	NA	73008859	73047479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73039544_73039620_73045960
transcript_13498.known	chr1	+	819	7	FSM	ENSG00000153363.14	ENST00000660130.1	819	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	106.761416251378	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTTTTTGAAGGC	-22	True	NA	7	True	AATAAA	-13	NA	211382792	211432533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211422538_211422640_211426210_211426284_211432318
transcript_134989.known	chr8	-	1308	6	FSM	ENSG00000147604.14	ENST00000396465.5	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	12337.6368985313	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGACCTCATCCTGAGA	31	False	NA	NA	False	AATGAA	-7	NA	73294438	73291041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293865
transcript_13499.known	chr1	+	812	7	FSM	ENSG00000153363.14	ENST00000653721.1	812	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	106.761416251378	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTTGTTTTTGAAGG	15	True	NA	6	True	AATAAA	-12	NA	211382829	211432532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211422538_211422671_211426210_211426284_211432318
transcript_134990.known	chr8	-	1233	7	FSM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	0	0	0	multi-exon	FALSE	canonical	3	19042	junction_1	4694.5917968327	109549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTCTTGTTTTGC	-6	True	NA	1	True	TATAAA	-38	NA	73293633	73290241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
transcript_134991.known	chr8	-	534	2	FSM	ENSG00000147604.14	ENST00000487500.2	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	19042	junction_1	0	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTTCCTTTTGCA	3332	False	NA	-24	True	TATAAA	-13	NA	73291137	73290266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73290706_73291042
transcript_134994.known	chr8	-	2970	15	FSM	ENSG00000040341.18	ENST00000524300.6	2970	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	161.581027882077	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	0	True	NA	0	True	AGTAAA	-24	NA	73746840	73420368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_134996.nic	chr8	-	2914	14	NIC	ENSG00000040341.18	novel	2970	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	115.76859187148	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	669	False	NA	0	True	AGTAAA	-24	NA	73746915	73420368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_135006.nic	chr8	-	2698	13	NIC	ENSG00000040341.18	novel	4061	12	NA	NA	-12	534	combination_of_known_junctions	FALSE	canonical	3	86	junction_1	123.179718523609	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTGTTTCTTAATAAA	669	False	NA	-3	True	AATAAA	-17	NA	73746915	73526834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_73527805_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_135017.known	chr8	-	4061	12	FSM	ENSG00000040341.18	ENST00000355780.9	4061	12	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_9	30.2559330975481	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTTTTAACTTTTAA	0	True	NA	-20	True	AGTAAA	-23	NA	73746840	73549603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_13502.known	chr1	+	715	6	FSM	ENSG00000153363.14	ENST00000663427.1	715	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	32.3196534634887	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAAACCTTTAGCTATT	-7	True	NA	NA	False	AATAAA	-22	NA	211382807	211408439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211399376_211399438_211408200
transcript_135026.known	chr8	-	1603	10	FSM	ENSG00000040341.18	ENST00000523558.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_9	189.436656731426	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGATCCTGCTACTGG	0	True	NA	37	True	NA	NA	NA	73746840	73421129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73746782
transcript_135028.known	chr8	-	1695	10	FSM	ENSG00000040341.18	ENST00000517542.5	1695	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	156.517738512719	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGATCTATCTAGTAAT	705	False	NA	NA	False	AAAAAG	-29	NA	73746879	73551829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73746782
transcript_135029.known	chr8	-	3953	10	FSM	ENSG00000040341.18	ENST00000521727.5	3953	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	167.35126065986	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGTTAGAACTTTTT	NA	False	NA	-12	True	AATAAA	-14	NA	73747697	73549785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73747386
transcript_13503.known	chr1	+	704	6	FSM	ENSG00000153363.14	ENST00000656082.1	704	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.286778706301	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTTTTTGAAGGC	2	True	NA	7	True	AATAAA	-13	NA	211382816	211432533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396842_211426210_211426284_211432318
transcript_135035.known	chr8	-	1041	7	FSM	ENSG00000040341.18	ENST00000522962.5	1041	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	205.695905539113	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTACAGTTAACCA	766	False	NA	NA	False	AGTAAA	-8	NA	73746818	73653497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_13504.known	chr1	+	1811	6	FSM	ENSG00000153363.14	ENST00000661331.1	1811	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.92447881329	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCACAGTGTTTTATAA	NA	False	NA	NA	False	AATAAA	-18	NA	211382761	211433679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391910_211391977_211396766_211396832_211426210_211426284_211432318
transcript_135042.known	chr8	-	2173	6	FSM	ENSG00000040341.18	ENST00000524104.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	174.966968311164	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAGTAAGTAATGCAT	0	True	NA	NA	False	ATTAAA	-29	NA	73746840	73652256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_135045.known	chr8	-	658	5	FSM	ENSG00000040341.18	ENST00000524113.5	658	5	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_2	26.9385875650525	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAGCAGGTTCACAAGG	0	True	NA	NA	False	NA	NA	NA	73746840	73672981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_13505.known	chr1	+	557	6	FSM	ENSG00000153363.14	ENST00000656886.1	557	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.92447881329	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTTGTTTTTGAAGG	15	True	NA	6	True	AATAAA	-12	NA	211382829	211432532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391949_211391977_211396766_211396832_211426210_211426284_211432318
transcript_135051.nic	chr8	-	1030	3	ISM	ENSG00000040341.18	ENST00000522061.5	564	6	-75	48813	-12	735	5prime_fragment	FALSE	canonical	3	521	junction_1	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAACAAAATACTTT	669	False	NA	NA	False	AAAACA	-14	NA	73746915	73737565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_73738350_73739755_73739869_73746782
transcript_135054.known	chr8	-	2712	8	FSM	ENSG00000040341.18	ENST00000521451.5	2712	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	229.455166578109	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGCTTATTTATGAAT	700	False	NA	95	True	AATAAA	-17	NA	73746884	73550546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615808_73617291_73617452_73746782
transcript_135055.known	chr8	-	590	6	FSM	ENSG00000040341.18	ENST00000519818.5	590	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	190.781550470689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCAATAAAGCTTTGACT	-3	True	NA	NA	False	TATAAA	-18	NA	73746843	73688734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73742223_73742364_73746782
transcript_13506.known	chr1	+	1671	5	FSM	ENSG00000153363.14	ENST00000664255.1	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	26.3912864407933	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTACTCTGTCCCTT	NA	False	NA	NA	False	TTTAAA	-6	NA	211382735	211399219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211398035
transcript_135061.known	chr8	-	2268	7	FSM	ENSG00000104343.21	ENST00000651945.1	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	130.967871378187	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAATTAAAAC	-12	True	NA	-34	True	NA	NA	NA	73878862	73792362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73870268_73870302_73878807
transcript_135063.nnic	chr8	-	737	6	NNC	ENSG00000258677.2	novel	776	8	NA	NA	-57	-87631	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	114.69856145567	48	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTTGTGGTACTTTAT	NA	False	NA	-3	True	AATAAA	-19	NA	73878911	73776321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_73776528_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_135064.nic	chr8	-	952	6	NIC	ENSG00000104343.21	novel	850	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	114.69856145567	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTTTGAACTACTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	73878911	73780096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_73780518_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_135065.nnic	chr8	-	844	6	NNC	ENSG00000104343.21	novel	850	5	NA	NA	-1	-413	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	115.463240903761	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCATACTATCTAT	NA	False	NA	NA	False	AATAAA	-33	NA	73878911	73780509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_73780823_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_135067.known	chr8	-	8426	6	FSM	ENSG00000104343.21	ENST00000517608.5	8426	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	33.8762453645619	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTTTGGCTTTTTTTA	NA	False	NA	-1	True	AATAAA	-17	NA	73878910	73786219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_135072.known	chr8	-	3903	5	FSM	ENSG00000104343.21	ENST00000422906.6	3903	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	110.141670134423	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGGTTACTGCTGC	-25	True	NA	-22	True	AATAAA	-24	NA	73878875	73790604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73830380_73830473_73878807
transcript_135078.known	chr8	-	850	5	FSM	ENSG00000104343.21	ENST00000523278.5	850	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	128.173710252922	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTTTGAACTACTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	73830474	73780096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73780518_73805650_73805727_73810473_73810630_73825146_73825250_73830380
transcript_13508.known	chr1	+	1115	4	FSM	ENSG00000153363.14	ENST00000662409.1	1115	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	8.25967446224258	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGCTCCTTCTCA	-25	True	NA	NA	False	ATTAAA	-15	NA	211382789	211397513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766
transcript_135084.known	chr8	-	719	6	FSM	ENSG00000154582.18	ENST00000523815.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1812.34544168599	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACTATATAAAGTTC	385	False	NA	45	True	NA	NA	NA	73971908	73946533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73970578_73970635_73971869
transcript_1351.nnic	chr1	-	591	2	NIC	ENSG00000231789.3	novel	978	3	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	41	junction_1	0	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTAATGGTTCATCA	NA	False	NA	0	True	AATAAA	-33	NA	9687610	9672404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_9672720_9687334
transcript_135100.known	chr8	-	1976	5	FSM	ENSG00000154582.18	ENST00000622804.2	1992	5	44	-28	0	-19	multi-exon	FALSE	canonical	3	9	junction_4	1882.54978353827	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	385	False	NA	NA	False	NA	NA	NA	73971908	73945137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578_73970635_73971869
transcript_135131.known	chr8	-	683	4	FSM	ENSG00000154582.18	ENST00000284811.12	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	1743.06250286353	2205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTAGGTGGTTTTGCCTT	187	False	NA	-10	True	AATAAA	-13	NA	73972106	73946400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972041
transcript_13514.known	chr1	+	469	3	FSM	ENSG00000153363.14	ENST00000610948.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	39.5	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTTTGAAGGCC	7328	False	NA	8	True	AATAAA	-14	NA	211399257	211432534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211399438_211426210_211426284_211432318
transcript_135146.known	chr8	-	1451	3	FSM	ENSG00000154582.18	ENST00000520210.1	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	1926.5	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTCAGCTTTTCTATT	12	True	NA	7	True	AATAAA	-37	NA	73972170	73945607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73972076
transcript_135151.known	chr8	-	2015	4	FSM	ENSG00000154582.18	ENST00000520242.6	2015	4	0	0	0	0	multi-exon	FALSE	canonical	3	2603	junction_3	572.278681141355	10669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-9	True	NA	NA	False	NA	NA	NA	73972191	73945118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972076
transcript_135152.known	chr8	-	1943	4	FSM	ENSG00000154582.18	ENST00000518127.5	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_3	1487.21372595423	2799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	6	True	NA	NA	False	NA	NA	NA	73972287	73945118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972244
transcript_135153.known	chr8	-	816	5	FSM	ENSG00000154582.18	ENST00000522337.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1873.80401856758	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTTGTTTGCTAC	-3	True	NA	-82	True	NA	NA	NA	73972232	73946472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73969559_73969674_73972076
transcript_135154.known	chr8	-	634	5	FSM	ENSG00000154582.18	ENST00000519082.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	1786.51201717201	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTCCCAATTGCAC	1	True	NA	-121	True	NA	NA	NA	73972252	73946699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73972076
transcript_135155.known	chr8	+	928	4	FSM	ENSG00000175606.11	ENST00000416961.6	928	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	153.486155727479	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGAAGAGAAACGGCAT	-22	True	NA	NA	False	AAGAAA	-1	NA	73976194	73981586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73976492_73978755_73978862_73979078_73979172_73981154
transcript_135159.known	chr8	+	617	3	FSM	ENSG00000175606.11	ENST00000517439.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	184	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACTTATAAAGCCATTAC	-10	True	NA	NA	False	NA	NA	NA	73976206	73981366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73976492_73978755_73978876_73981154
transcript_135162.known	chr8	+	2471	7	FSM	ENSG00000104381.14	ENST00000434412.3	2471	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.0213785720833	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTAGCAGCTTTTATAA	-24	True	NA	NA	False	AATAAA	-31	NA	74350402	74365834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74351453_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_135165.known	chr8	+	3500	6	FSM	ENSG00000104381.14	ENST00000675625.1	3500	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	71.0194339600084	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTACTCACTTTG	-32	True	NA	5	True	AATAAA	-28	NA	74350394	74366868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_135167.known	chr8	+	3616	6	FSM	ENSG00000104381.14	ENST00000675165.1	3616	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	72.2595322431581	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATGAACCCTAA	-24	True	NA	-13	True	AATAAA	-10	NA	74350402	74366850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363987
transcript_135170.known	chr8	+	945	6	FSM	ENSG00000104381.14	ENST00000676207.1	945	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	72.2595322431581	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATCTTATTTTGTAT	-14	True	NA	NA	False	AATAAA	-25	NA	74350412	74488879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74488677
transcript_135173.known	chr8	+	2593	6	FSM	ENSG00000104381.14	ENST00000520797.6	2593	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.3348633735866	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTCCCGATTTACAAA	318	False	NA	NA	False	NA	NA	NA	74350744	74365772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350973_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_135174.known	chr8	+	3606	5	FSM	ENSG00000104381.14	ENST00000675821.1	3606	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	90.3410205831216	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGAACCCTAAAACAAAG	NA	False	NA	-6	True	AATAAA	-17	NA	74320612	74366857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74320962_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_135177.known	chr8	+	3407	5	FSM	ENSG00000104381.14	ENST00000675220.1	3407	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	89.9260112536968	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAATTGGAAAATAAATAT	225	False	NA	-22	True	AATAAA	-1	NA	74321079	74366841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74321246_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_135178.known	chr8	+	3273	5	FSM	ENSG00000104381.14	ENST00000675336.1	3273	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	87.499642856414	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTAAGATCAATAAAAG	-24	True	NA	-40	True	NA	NA	NA	74350402	74366823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74361883_74361979_74362938_74363054_74363984
transcript_13518.known	chr1	+	681	6	FSM	ENSG00000153363.14	ENST00000657539.1	681	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	26.6007518690732	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTTTGAAGGCCC	15	True	NA	9	True	AATAAA	-15	NA	211382829	211432535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432320
transcript_135181.known	chr8	+	2378	5	FSM	ENSG00000104381.14	ENST00000675928.1	2378	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	87.086164228309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTCCCGATTTACAAAAAA	-32	True	NA	NA	False	NA	NA	NA	74350394	74365775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351467_74361883_74361979_74362938_74363054_74363984
transcript_135184.known	chr8	+	3395	5	FSM	ENSG00000104381.14	ENST00000675832.1	3395	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90.7561981354442	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATTCTGTAAGATCAATA	-24	True	NA	-44	True	NA	NA	NA	74350402	74366819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_135186.known	chr8	+	541	4	FSM	ENSG00000104381.14	ENST00000524195.2	541	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	90.5096679918781	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATCTTATTTTGTAT	-24	True	NA	NA	False	AATAAA	-25	NA	74350402	74488879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74362938_74363054_74488677
transcript_135187.known	chr8	-	590	2	FSM	ENSG00000253596.1	ENST00000521872.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTTTATTTCTTTATG	NA	False	NA	NA	False	AATATA	-2	NA	74350050	74347756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_74348206_74349909
transcript_135189.nic	chr8	+	1520	5	NIC	ENSG00000254349.6	novel	2125	6	NA	NA	-6	-2749	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.6393596310755	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATTTTAAAAGTGCAT	7	False	NA	NA	False	AATAAA	-16	NA	74599768	74708856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_74599909_74612852_74612941_74702378_74702457_74703605_74703683_74707719
transcript_13519.known	chr1	+	778	7	FSM	ENSG00000153363.14	ENST00000653498.1	778	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.554120743414	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGAAGGCCCAC	15	True	NA	11	True	AATAAA	-17	NA	211382829	211432537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211384441_211384535_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
transcript_135192.known	chr8	-	773	4	FSM	ENSG00000253706.5	ENST00000523860.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.02768199119819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTTCAATTGAGGT	NA	False	NA	NA	False	TTTAAA	-28	NA	74866925	74798783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_74799320_74818609_74818669_74866517_74866635_74866864
transcript_135194.nnic	chr8	-	726	3	NIC	ENSG00000253706.5	novel	773	4	NA	NA	-51	-53	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCACTGTAAGTGGCTC	NA	False	NA	NA	False	ATTAAA	-1	NA	74866990	74798836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_74799320_74866517_74866635_74866864
transcript_135198.known	chr8	+	4297	15	FSM	ENSG00000121005.9	ENST00000262207.9	4297	15	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	38.0053701898206	551	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACCATTGTAATTATTT	0	True	NA	30	True	ATTAAA	-27	NA	74984504	75034558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74984921_74985925_74986246_75012432_75012552_75012889_75013023_75013986_75014103_75014811_75014913_75016564_75016706_75016880_75016942_75017046_75017114_75017319_75017451_75019869_75019914_75020006_75020080_75025545_75025622_75029386_75029518_75032190
transcript_1352.nic	chr1	-	564	2	ISM	ENSG00000231789.3	ENST00000415330.3	978	3	-34	8440	-34	-8440	5prime_fragment	FALSE	canonical	3	82	junction_1	0	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGTGTTGGCGTGATT	NA	False	NA	-7	True	CATAAA	-17	NA	9687607	9680844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_9681136_9687334
transcript_13520.known	chr1	+	898	8	FSM	ENSG00000153363.14	ENST00000653287.1	898	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103.659962160431	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGAAGGCCCAC	2	True	NA	11	True	AATAAA	-17	NA	211382816	211432537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211384441_211384535_211390563_211390671_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
transcript_135219.known	chr8	-	1120	3	FSM	ENSG00000249395.4	ENST00000521147.2	1120	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAAAAGAAGAGG	NA	False	NA	NA	False	NA	NA	NA	75324653	75223452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75278356_75278482_75324564
transcript_13522.known	chr1	-	1318	8	FSM	ENSG00000117650.13	ENST00000540251.5	1318	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	67.0220798220517	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCCTCGTAGGCTCAA	-4	True	NA	NA	False	NA	NA	NA	211675630	211658656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_211658713_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_135220.known	chr8	-	1484	3	FSM	ENSG00000249395.4	ENST00000675897.1	1484	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTCTATAGCTAA	NA	False	NA	-44	True	AATAAA	-12	NA	75324711	75223134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75324220_75324334_75324564
transcript_135221.nnic	chr8	-	605	3	NNC	ENSG00000249395.4	novel	668	3	NA	NA	-1	-89701	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTTTCCTGACTGGACCC	NA	False	NA	NA	False	ATTAAA	-17	NA	75324693	75313372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_75313736_75324220_75324334_75324564
transcript_135223.known	chr8	-	1513	2	FSM	ENSG00000249395.4	ENST00000670695.1	1513	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATAGCTAATGGAAGTG	NA	False	NA	-36	True	AATAAA	-20	NA	75278637	75223126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75278356
transcript_135224.known	chr8	-	1704	2	FSM	ENSG00000249395.4	ENST00000669950.1	1704	2	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATAGCTAATGGAAGTG	NA	False	NA	-36	True	AATAAA	-20	NA	75324692	75223126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75324220
transcript_135225.known	chr8	-	1218	2	FSM	ENSG00000249395.4	ENST00000654852.2	1218	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCCAAGCGACATCATT	NA	False	NA	NA	False	AATAAA	-12	NA	75324741	75223317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75324564
transcript_135229.nnic	chr8	-	836	2	NNC	ENSG00000249395.4	novel	668	3	NA	NA	-1	-89701	intron_retention	FALSE	canonical	1	1	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTTTCCTGACTGGACCC	NA	False	NA	NA	False	ATTAAA	-17	NA	75324693	75313372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_75313736_75324220
transcript_135230.known	chr8	-	386	1	FSM	ENSG00000249395.4	ENST00000675539.1	386	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACGTTTGTGGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	75120798	75120412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75120400_75120800
transcript_135232.nnic	chr8	+	712	3	NNC	ENSG00000164749.13	novel	470	5	NA	NA	-37	-13548	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATCTTTGCATTTTTAT	210	False	NA	NA	False	AATAAA	-22	NA	75407876	75513586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_75407965_75490088_75490209_75513082
transcript_135234.known	chr8	+	2081	8	FSM	ENSG00000091656.19	ENST00000650716.1	2081	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.534522483824849	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCATTTAGATGCCAAAGA	NA	False	NA	NA	False	NA	NA	NA	76776387	76851907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_76776576_76778207_76778440_76833337_76833407_76842654_76842772_76848994_76849129_76849511_76849713_76850244_76850363_76850885
transcript_135236.known	chr8	+	13987	11	FSM	ENSG00000091656.19	ENST00000651372.2	13987	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.94339811320566	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATGTGTTTTCTTTC	-62	True	NA	14	True	ATTAAA	-16	NA	76681246	76867281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_76681621_76704042_76706679_76707545_76708049_76778207_76778440_76833337_76833407_76842654_76842772_76848994_76849129_76849511_76849713_76850244_76850363_76850885_76856301_76863093
transcript_13524.nic	chr1	-	2331	8	NIC	ENSG00000117650.13	novel	2134	8	NA	NA	-212	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	56.7964500184112	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	NA	False	NA	0	True	AATAAA	-23	NA	211675842	211662771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_211663629_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_135245.known	chr8	-	1627	3	FSM	ENSG00000164751.15	ENST00000522527.5	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	88.5	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATTCTAAAGATAAAG	649	False	NA	-38	True	AAAACA	-3	NA	77000267	76982956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_76984196_76986186_76986297_76999989
transcript_135252.known	chr8	+	3962	4	FSM	ENSG00000171033.13	ENST00000396418.7	3962	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	60.0351748745868	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTATTAAGAGTATT	2	True	NA	10	True	ATTAAA	-25	NA	78516339	78605267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78516469_78572810_78572940_78598357_78598536_78601741
transcript_135254.known	chr8	+	1736	3	FSM	ENSG00000171033.13	ENST00000352966.9	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	107	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGGTAATAAATAAGG	17	True	NA	-17	True	NA	NA	NA	78516354	78603185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78516469_78598357_78598536_78601741
transcript_135256.known	chr8	-	2016	6	FSM	ENSG00000104432.14	ENST00000263851.9	2016	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGCCAGATTCAGTTAAT	-7	True	NA	NA	False	AATAAA	-16	NA	78805463	78732771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_78733833_78736473_78736528_78738503_78738636_78740001_78740083_78798071_78798209_78804912
transcript_13526.known	chr1	-	2134	8	FSM	ENSG00000117650.13	ENST00000366999.9	2134	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	20.6081022307009	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	5	True	NA	0	True	AATAAA	-23	NA	211675621	211662771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_211663653_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_135269.known	chr8	+	3310	9	FSM	ENSG00000104427.12	ENST00000263849.9	3310	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	21.0531321897717	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTTCGTATTCACTGA	11	True	NA	13	True	AATAAA	-18	NA	78666088	78719765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220_78715329_78717327
transcript_135278.known	chr8	+	981	3	FSM	ENSG00000104427.12	ENST00000521873.1	981	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTCCCATGTGCTTTA	11	True	NA	NA	False	NA	NA	NA	78666088	78679390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78666165_78675786_78675864_78678562
transcript_135281.known	chr8	+	1903	5	FSM	ENSG00000104435.14	ENST00000220876.12	1903	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	5.59016994374947	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTTTGGTCTGTTCTC	0	True	NA	13	True	AATAAA	-23	NA	79611116	79666158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_79611215_79636801_79636898_79641377_79641551_79654870_79655063_79664814
transcript_135283.known	chr8	+	585	5	FSM	ENSG00000104435.14	ENST00000518491.1	585	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.4727649331796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTCTGGCACGCCCCAC	-7	True	NA	NA	False	NA	NA	NA	79611734	79664881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_79611792_79636801_79636898_79641377_79641551_79654870_79655063_79664814
transcript_135287.known	chr8	+	799	6	FSM	ENSG00000104435.14	ENST00000518111.5	799	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	57.6700962371314	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATCAAAAATTAAAAAAA	-3	True	NA	NA	False	TATAAA	-16	NA	79611151	79665007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_79611215_79636801_79636898_79641377_79641551_79654870_79655063_79663579_79663662_79664814
transcript_135288.known	chr8	-	2296	5	FSM	ENSG00000164683.18	ENST00000337919.9	2296	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.20156211871642	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTGTGGTGTATGTCT	-3	True	NA	NA	False	AATAAA	-15	NA	79767857	79764012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79765772_79766650_79766733_79766996_79767093_79767218_79767295_79767574
transcript_135290.known	chr8	+	571	3	FSM	ENSG00000272138.3	ENST00000607754.3	618	3	0	47	0	-43	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTGTGGATGTATTAT	-15	True	NA	NA	False	ATTAAA	-14	NA	79783638	79802799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_79783767_79800560_79800691_79802486
transcript_135292.known	chr8	-	585	4	FSM	ENSG00000147586.10	ENST00000521434.5	585	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	195.632876128278	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTCATCAAGAATGCAA	28	True	NA	-90	True	AATAAA	-40	NA	80029912	79918939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003121_80028694_80028797_80029760
transcript_135293.known	chr8	-	411	4	FSM	ENSG00000147586.10	ENST00000520946.1	411	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	194.929616927638	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCAGGAGAGTAAAGACT	-34	True	NA	NA	False	NA	NA	NA	80029974	79919031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003121_80028694_80028797_80029904
transcript_135298.known	chr8	-	487	4	FSM	ENSG00000147586.10	ENST00000518271.1	487	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	193.31896498332	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTGCGGCTATTAGATC	31	False	NA	NA	False	NA	NA	NA	80030232	79919124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003181_80028694_80028797_80030053
transcript_135311.known	chr8	-	555	3	FSM	ENSG00000147586.10	ENST00000519386.5	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	203.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	-1	True	NA	-5	True	AATAAA	-23	NA	80029839	79918854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003181_80029760
transcript_135312.known	chr8	-	403	3	FSM	ENSG00000147586.10	ENST00000519120.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	174.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAATGAACTTTGCT	-24	True	NA	NA	False	AGTAAA	-29	NA	80029964	79918987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003181_80029904
transcript_13532.known	chr1	-	1865	7	FSM	ENSG00000117650.13	ENST00000366998.4	1865	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	15.0738920727934	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTAATATTGCCATGCC	69	False	NA	NA	False	AATAAA	-1	NA	211675557	211666429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_135320.known	chr8	-	437	2	FSM	ENSG00000147586.10	ENST00000521605.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATTGACTCCTTTGCTG	NA	False	NA	NA	False	AATAAA	-14	NA	80030289	79918965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80030035
transcript_135323.known	chr8	-	838	3	FSM	ENSG00000147586.10	ENST00000276585.9	838	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	98	4683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	4	True	NA	0	True	AATAAA	-21	NA	80030259	79918716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003181_80030035
transcript_135324.known	chr8	-	487	3	FSM	ENSG00000147586.10	ENST00000522987.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATCATATATTGTATG	9	True	NA	NA	False	AATGAA	-14	NA	80030254	79958271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79958436_80002998_80003121_80030053
transcript_135325.known	chr8	-	783	2	FSM	ENSG00000147586.10	ENST00000518371.2	783	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGTGGATTTTTCT	NA	False	NA	NA	False	NA	NA	NA	80003148	79957802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79958436_80002998
transcript_13533.nnic	chr1	+	316	3	NNC	ENSG00000231057.4	novel	755	4	NA	NA	-19	-9304	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGTGGCATCCTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	211675729	211677410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_211675867_211677066_211677155_211677319
transcript_135330.known	chr8	-	584	7	FSM	ENSG00000076554.16	ENST00000518517.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	421.06557947928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCGGCTGCAAATGCTAG	2	True	NA	NA	False	NA	NA	NA	80171471	80038184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80119814_80119885_80171424
transcript_135336.known	chr8	-	4041	6	FSM	ENSG00000076554.16	ENST00000379096.9	4041	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	340.64961470696	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACGTGATCTTTCACTTT	-21	True	NA	0	True	AATACA	-23	NA	80171558	80034744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_80038236_80042619_80042669_80051526_80051629_80053281_80053431_80064477_80064594_80171424
transcript_135340.known	chr8	-	628	1	FSM	ENSG00000241746.1	ENST00000478813.1	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGTAAAGACTGTTAAT	21	False	NA	NA	False	AATACA	-36	NA	80266155	80265527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_80265500_80266200
transcript_135342.known	chr8	+	986	4	FSM	ENSG00000164687.11	ENST00000396359.1	986	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	826.827000580465	4735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTATGCATTCTTTA	331	False	NA	NA	False	AATAAA	-21	NA	81280866	81284777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_81281314_81283365_81283539_81283872_81283975_81284513
transcript_135344.known	chr8	-	620	2	FSM	ENSG00000254027.1	ENST00000518880.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATTCAAGAATGTTTGA	2476	False	NA	NA	False	ACTAAA	-36	NA	81281446	81279870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81280377_81281332
transcript_135345.known	chr8	+	676	4	FSM	ENSG00000164687.11	ENST00000297258.11	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	1614	junction_2	108.369737473153	16457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTTGTATGCATTCTT	0	True	NA	NA	False	AATAAA	-19	NA	81280535	81284775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_81280675_81283365_81283539_81283872_81283975_81284513
transcript_135353.known	chr8	-	1180	10	FSM	ENSG00000133731.10	ENST00000449740.6	1180	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	85.8082847305262	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAAATTCTCTTTGTCC	22	True	NA	NA	False	NA	NA	NA	81686283	81659261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81685762_81685964_81686251
transcript_135356.known	chr8	-	3369	9	FSM	ENSG00000133731.10	ENST00000256108.10	3369	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	22.2696542406926	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATTGTGTTCATTCTAT	-20	True	NA	NA	False	CATAAA	-44	NA	81686325	81656913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_135358.known	chr8	-	1106	8	FSM	ENSG00000133731.10	ENST00000311489.8	1106	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	77.4111735857193	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGAAATTTTGACTTAG	4	True	NA	NA	False	NA	NA	NA	81686301	81659043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81659467_81660515_81660668_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_13536.known	chr1	-	4430	20	FSM	ENSG00000143493.13	ENST00000366994.8	4430	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.070231019185	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGCCTTTTTCTCT	-21	True	NA	-6	True	AATAAA	-17	NA	212035557	211940402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_135376.known	chr8	-	772	7	FSM	ENSG00000104231.11	ENST00000521287.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	129.191610494731	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCAGAAATCACAGGGA	3	True	NA	NA	False	NA	NA	NA	81721295	81702681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
transcript_135387.known	chr8	-	882	6	FSM	ENSG00000104231.11	ENST00000520635.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	126.142776249772	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGATCATACTTTGGAAA	448	False	81732436	86	True	NA	NA	NA	81732407	81702824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81715115_81718181_81718225_81732198
transcript_135390.known	chr8	-	664	6	FSM	ENSG00000104231.11	ENST00000520604.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	131.085620874297	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATAACAAATTTACAGC	28	True	NA	-82	True	NA	NA	NA	81732345	81702992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81732198
transcript_135391.known	chr8	+	1852	5	FSM	ENSG00000164695.5	ENST00000297265.5	1852	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.7169905660283	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCGTTATTATTTTT	-21	True	NA	NA	False	AATAAA	-2	NA	81732447	81759515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_81732817_81753063_81753242_81755369_81755485_81758141_81758296_81758479
transcript_135395.known	chr8	-	2184	8	FSM	ENSG00000104231.11	ENST00000220669.10	2184	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	40.5814876865935	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATAATATCTGAGCCT	-2	True	NA	NA	False	AGTAAA	-23	NA	81721300	81701336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_135396.known	chr8	-	1778	8	FSM	ENSG00000104231.11	ENST00000523096.5	1778	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	115.819705066248	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	-2	True	NA	-18	True	AATAAA	-14	NA	81721300	81701721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703104_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_135397.known	chr8	-	1705	7	FSM	ENSG00000104231.11	ENST00000522520.5	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	82.3724603385271	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTATAGGTTTACTTAA	9	True	NA	-61	True	NA	NA	NA	81721289	81701764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_135398.known	chr8	-	698	7	FSM	ENSG00000104231.11	ENST00000519523.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	39.5196856712646	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	10	True	NA	-3	True	AATAAA	-18	NA	81721288	81702913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_135399.known	chr8	-	633	6	FSM	ENSG00000104231.11	ENST00000517588.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	85.7517346763318	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	35	False	NA	-3	True	AATAAA	-18	NA	81721263	81702913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_135400.known	chr8	-	1006	9	FSM	ENSG00000104231.11	ENST00000519464.5	1006	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	143.045392708049	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTTTTTGGTTTTAA	11	True	NA	-26	True	TTTAAA	-15	NA	81721287	81702543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81708787_81708830_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_135403.known	chr8	-	3452	9	FSM	ENSG00000104497.15	ENST00000396330.6	3452	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	28.349382709329	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGTAGCTGTGTTGTT	323	False	NA	-8	True	AATAAA	-14	NA	81842286	81799586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81840197_81840444_81842121
transcript_135404.known	chr8	-	3109	8	FSM	ENSG00000104497.15	ENST00000345957.9	3109	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	9.70167248362837	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCTGTGTTGTTCATA	-13	True	NA	-4	True	AATAAA	-18	NA	81842185	81799582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81842121
transcript_135408.known	chr8	-	3032	7	FSM	ENSG00000104497.15	ENST00000353788.8	3032	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	27.7993804887007	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGTGTTGTTCATATG	23	True	NA	-2	True	AATAAA	-20	NA	81842193	81799580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81839611_81840083_81842121
transcript_135413.nnic	chr8	-	667	3	Antisense	novelGene_ENSG00000254689.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCAATTTCTTTTTCTTT	NA	False	NA	NA	False	TATAAA	-16	NA	81903656	81897758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_-_81898106_81901725_81901813_81903423
transcript_135416.known	chr8	+	3726	19	FSM	ENSG00000133739.16	ENST00000360375.8	3726	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	19.737865470545	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTGTTCCTGAAGAG	18	True	NA	10	True	ATTAAA	-24	NA	85107237	85146080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85107400_85109594_85109801_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
transcript_135418.nic	chr8	+	3574	18	NIC	ENSG00000133739.16	novel	3726	19	NA	NA	-31	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_5	16.7994480054315	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTGTTCCTGAAGAG	NA	False	NA	10	True	ATTAAA	-24	NA	85107183	85146080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
transcript_135424.known	chr8	+	2385	15	FSM	ENSG00000133739.16	ENST00000517875.5	2385	15	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	15.175167685588	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATCACAGAAATAGAA	18	True	NA	18	True	AAAAAG	-25	NA	85107237	85138074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034
transcript_135425.known	chr8	+	2122	13	FSM	ENSG00000133739.16	ENST00000522567.5	2122	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	22.7358014300501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAACTAAAACAAC	-5	True	NA	NA	False	AATGAA	-3	NA	85107214	85138174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85107400_85110114_85110181_85112931_85113100_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034
transcript_13543.nic	chr1	-	2722	17	ISM	ENSG00000143493.13	ENST00000366993.7	3422	20	-27	10941	-6	138	5prime_fragment	FALSE	canonical	3	141	junction_2	23.1718275876116	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGTTGCAATAATTCTC	-27	True	NA	NA	False	AATAAA	-26	NA	212035563	211952288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_135433.nic	chr8	+	930	5	ISM	ENSG00000133739.16	ENST00000517875.5	2385	15	-54	22396	-31	-16252	5prime_fragment	FALSE	canonical	3	54	junction_1	15.5944701737507	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTGCATCAGTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	85107183	85115678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_85107400_85110114_85110181_85112931_85113100_85115099_85115276_85115374
transcript_135437.known	chr8	+	1890	8	FSM	ENSG00000133740.11	ENST00000418930.6	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	86.6927485610026	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGGTCTTTGTGGAGA	31	False	NA	12	True	AATAAA	-19	NA	85177224	85214518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212159_85212205_85213752
transcript_135448.known	chr8	-	483	5	FSM	ENSG00000176731.12	ENST00000615697.4	483	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	892.610077245378	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATGCATCTAATTCT	15	True	NA	-69	True	AATATA	-1	NA	85220353	85214555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219361_85220305
transcript_135449.known	chr8	-	586	5	FSM	ENSG00000176731.12	ENST00000612977.4	586	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	848.686742856279	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAATGTACAGGCAT	-16	True	NA	0	True	AATAAA	-33	NA	85220384	85214486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219364_85220305
transcript_135451.known	chr8	-	475	5	FSM	ENSG00000176731.12	ENST00000612809.4	475	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_4	782.929235308019	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-7	True	NA	-15	True	AATAAA	-18	NA	85220375	85214501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219322_85219364_85220305
transcript_135455.known	chr8	-	887	4	FSM	ENSG00000176731.12	ENST00000619594.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	1674	junction_3	77.7231554228782	5288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCAGAGCCCTTTGTTT	-6	True	NA	NA	False	ATTAAA	-17	NA	85220374	85214047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85220305
transcript_13546.known	chr1	+	4409	15	FSM	ENSG00000143476.18	ENST00000366991.5	4409	15	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_9	31.7972691678171	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGCATTTAAGATGGC	-12	True	NA	8	True	AATAAA	-22	NA	212035747	212105013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_135460.known	chr8	-	734	3	FSM	ENSG00000176731.12	ENST00000614462.4	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	721.5	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGATATTAAATCACTTA	1	True	NA	NA	False	AATATA	-25	NA	85220367	85214076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85217385_85217503_85220305
transcript_135462.known	chr8	+	5042	8	FSM	ENSG00000133740.11	ENST00000256117.9	5042	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	181.417772457015	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAGTTAAAATGTTTA	180	False	NA	NA	False	ATTAAA	-15	NA	85177611	85217158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85177655_85202146_85202257_85203093_85203256_85206176_85206221_85207424_85207490_85209141_85209410_85212156_85216308_85216959
transcript_135463.known	chr8	-	799	2	FSM	ENSG00000176731.12	ENST00000523245.1	799	2	0	0	0	0	multi-exon	FALSE	canonical	3	1674	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCAGCTCTCCAGGACT	NA	False	NA	NA	False	AAGAAA	-39	NA	85220414	85216812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85217503_85220305
transcript_135464.known	chr8	-	491	4	FSM	ENSG00000176731.12	ENST00000545322.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	108.42611411566	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	NA	False	NA	-15	True	AATAAA	-18	NA	85220421	85214501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85217385_85217503_85219235_85219364_85220305
transcript_135465.known	chr8	-	344	2	FSM	ENSG00000176731.12	ENST00000615071.1	344	2	0	0	0	0	multi-exon	FALSE	canonical	3	1862	junction_1	0	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	5234	False	NA	-15	True	AATAAA	-18	NA	85215134	85214501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920
transcript_135466.known	chr8	+	700	4	FSM	ENSG00000185015.8	ENST00000522631.1	700	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTGTGACATAGGAGG	57	False	NA	NA	False	AATACA	-1	NA	85220926	85230336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85221126_85224954_85225296_85230084_85230201_85230292
transcript_135470.nic	chr8	+	883	2	ISM	ENSG00000185015.8	ENST00000522631.1	700	4	-446	5144	-106	-5144	5prime_fragment	FALSE	canonical	2	8	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTGCCTTTAAATGTA	NA	False	NA	NA	False	AATAAA	-19	NA	85220480	85225192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_85221126_85224954
transcript_135471.known	chr8	+	1721	7	FSM	ENSG00000164879.7	ENST00000285381.3	1721	7	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	2.7938424357067	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGAGTGTTGTGTTTTTT	1	True	NA	6	True	AATAAA	-16	NA	85438858	85449040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85438944_85439711_85439910_85442072_85442192_85444033_85444127_85445155_85445219_85446141_85446298_85448033
transcript_135473.known	chr8	+	1562	7	FSM	ENSG00000104267.10	ENST00000285379.10	1562	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	17.7074999803912	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGTTATTTATTTATT	1	True	NA	19	True	AATAAA	-44	NA	85464006	85481493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323_85474417_85475797_85475861_85477119_85477276_85480669
transcript_135477.known	chr8	+	684	4	FSM	ENSG00000104267.10	ENST00000520996.5	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	12.0277457017791	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGATGGAGGGCAGAAA	-3	True	NA	NA	False	NA	NA	NA	85464002	85474577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323
transcript_135478.nic	chr8	-	681	3	NIC	ENSG00000253549.6	novel	796	3	NA	NA	98	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	3	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGATTGCTTTTTT	NA	False	NA	NA	False	AATAAA	-36	NA	85464817	85456484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_85456864_85462735_85462802_85464581
transcript_135479.nic	chr8	+	1035	2	ISM	ENSG00000104267.10	ENST00000518231.1	587	3	-58	7833	-15	-7833	5prime_fragment	FALSE	canonical	3	241	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAGAAAGAAGAAAAA	42	False	NA	NA	False	AATAGA	-40	NA	85463952	85466143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_85464116_85465271
transcript_135480.known	chr8	+	2370	8	FSM	ENSG00000147614.4	ENST00000285393.4	2370	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.38190457150472	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTGGTTTCTTCCTT	-1	True	NA	1	True	AATAAA	-43	NA	86098909	86154225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_86099109_86113708_86113881_86139456_86139636_86141449_86141530_86142876_86142955_86150111_86150289_86151465_86151541_86152815
transcript_135481.known	chr8	-	2557	3	FSM	ENSG00000147613.8	ENST00000276616.3	2557	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAGGCAAAGAATTTT	-3	True	NA	NA	False	AATAAA	-21	NA	86069668	86047108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86048768_86063964_86064632_86069437
transcript_135484.known	chr8	+	4877	25	FSM	ENSG00000123124.14	ENST00000517970.6	4877	25	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	20.1431939842938	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCATAAAAGAGTTAAGT	-19	True	NA	NA	False	AAAAAG	-9	NA	86342546	86468503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_86342931_86368938_86369032_86374029_86374121_86380725_86380865_86381504_86381630_86398341_86398480_86398571_86398639_86402018_86402204_86411537_86411875_86425222_86425319_86427642_86427818_86430696_86430752_86431405_86431491_86431614_86431744_86435451_86435528_86435632_86435705_86438584_86438674_86442618_86442779_86448147_86448282_86448372_86448514_86452558_86452680_86457920_86458026_86461223_86461321_86461773_86461847_86466793
transcript_135486.known	chr8	-	1601	4	FSM	ENSG00000254231.3	ENST00000521326.2	1601	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTATGCTTTTATTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	86343429	86333273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86334200_86335702_86335762_86338119_86338388_86343081
transcript_135499.known	chr8	-	2970	10	FSM	ENSG00000176623.12	ENST00000406452.8	2970	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	22.2660678562196	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	5671	False	86508706	-11	True	AATAAA	-19	NA	86508686	86472348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_135500.known	chr8	-	481	2	FSM	ENSG00000176623.12	ENST00000517404.1	481	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATGGCTCAGGCAAAG	NA	False	NA	-16	True	AATAAA	-29	NA	86475050	86474108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86474359_86474819
transcript_135501.known	chr8	-	1106	9	FSM	ENSG00000176623.12	ENST00000430676.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	71.1863751008576	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCATGGCTCAGGCA	-17	True	NA	-19	True	AATAAA	-26	NA	86508675	86474111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_135502.known	chr8	-	940	2	FSM	ENSG00000250569.1	ENST00000515730.1	940	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAGGAATTACCAAAG	NA	False	NA	NA	False	AATGAA	-40	NA	86483002	86481753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86482120_86482428
transcript_135503.known	chr8	+	4857	17	FSM	ENSG00000085719.13	ENST00000517490.6	4857	17	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_4	22.1295016606791	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTTCATATTTTACT	-15	True	NA	32	True	AATAAA	-20	NA	86514434	86561498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182_86551235_86554850_86554985_86556101_86556339_86558287
transcript_135517.nic	chr8	+	974	10	ISM	ENSG00000085719.13	ENST00000517490.6	4857	17	-41	14858	-41	1307	5prime_fragment	FALSE	canonical	3	213	junction_4	23.8689839553704	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACAAGAATTCAGGTGTT	NA	False	NA	38	True	CATAAA	-27	NA	86514393	86546640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594
transcript_135519.nnic	chr8	+	1006	10	NNC	ENSG00000085719.13	novel	4857	17	NA	NA	0	1307	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	84.4131520967768	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACAAGAATTCAGGTGTT	-15	True	NA	38	True	CATAAA	-27	NA	86514434	86546640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_86514615_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594
transcript_135520.nic	chr8	+	898	9	ISM	ENSG00000085719.13	ENST00000517490.6	4857	17	-41	16690	-41	0	5prime_fragment	FALSE	canonical	3	213	junction_4	25.3167434714657	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAAAGAAGCCTCCAG	NA	False	NA	NA	False	NA	NA	NA	86514393	86544808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739
transcript_135524.known	chr8	+	817	8	FSM	ENSG00000085719.13	ENST00000621783.4	817	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	89.4392964814798	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAAAGAAGCCTCCAG	-13	True	NA	NA	False	NA	NA	NA	86514436	86544808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_86514542_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739
transcript_13553.known	chr1	+	4471	14	FSM	ENSG00000143476.18	ENST00000542077.5	4471	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	111.431938523374	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGACTTTGAGCATTTA	61	False	NA	1	True	AATAAA	-15	NA	212035552	212105006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212035943_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_135532.known	chr8	+	594	2	FSM	ENSG00000253553.8	ENST00000520849.5	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAACGTTCCAGCAAA	5	True	NA	NA	False	AGTAAA	-12	NA	88327843	88329467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_88327899_88328928
transcript_135558.known	chr8	-	4227	5	FSM	ENSG00000251136.10	ENST00000653574.1	4227	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9.35414346693485	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGATATAACTTTAACT	1560	False	NA	NA	False	ACTAAA	-12	NA	89757812	89718519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89721375_89722014_89722157_89724628_89724967_89725517_89725642_89757044
transcript_135567.known	chr8	-	1442	4	FSM	ENSG00000251136.10	ENST00000521996.2	1442	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCATAATAGACTATTAA	1800	False	NA	NA	False	NA	NA	NA	89757572	89720940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89721375_89722014_89722157_89724628_89724967_89757044
transcript_135571.known	chr8	-	2880	3	FSM	ENSG00000251136.10	ENST00000661105.1	2880	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCCGAAACCTAAAATAAA	28	True	NA	-46	True	NA	NA	NA	89757651	89585871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89588051_89596418_89596513_89757044
transcript_135573.nnic	chr8	-	695	3	NIC	ENSG00000251136.10	novel	1465	7	NA	NA	-34	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCATTTATTCTTA	1952	False	NA	1	True	AATACA	-22	NA	89757420	89616928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_89617157_89647739_89647831_89757044
transcript_135575.nnic	chr8	-	694	3	NIC	ENSG00000251136.10	novel	810	4	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGTCATTTATTCT	1958	False	NA	-1	True	AATACA	-20	NA	89757414	89616930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_89617157_89629153_89629252_89757044
transcript_135579.known	chr8	-	1750	3	FSM	ENSG00000251136.10	ENST00000655144.2	1999	3	0	249	0	-56	multi-exon	FALSE	canonical	3	14	junction_2	5.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATCCTCCAAAATTTT	3	True	NA	NA	False	NA	NA	NA	89757722	89724018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89724967_89725517_89725642_89757044
transcript_13558.nic	chr1	+	778	7	ISM	ENSG00000143476.18	ENST00000366991.5	4409	15	-26	40014	-26	-35427	5prime_fragment	FALSE	canonical	3	406	junction_6	32.6019767635168	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTCAAAAGGACTTGC	-38	True	NA	NA	False	AAGAAA	-1	NA	212035721	212064999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916
transcript_135582.nnic	chr8	-	851	2	FSM	ENSG00000251136.10	ENST00000691446.1	570	2	-281	0	-16	0	multi-exon	FALSE	canonical	2	11	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCATTTATTCTTA	12	True	NA	1	True	AATACA	-22	NA	89757667	89616928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89617157_89757044
transcript_135588.known	chr8	+	2516	11	FSM	ENSG00000104312.8	ENST00000220751.5	2516	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	76.6123358213284	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCCCTTTCTTCC	-7	True	NA	10	True	AATAAA	-20	NA	89757815	89791064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_89758234_89762828_89762983_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_135593.known	chr8	+	1916	10	FSM	ENSG00000104312.8	ENST00000522965.1	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	96.6825018958421	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAATTTTTATGTCTCT	-17	True	NA	19	True	AGTAAA	-21	NA	89757805	89790608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_89758234_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_135598.known	chr8	+	4209	6	FSM	ENSG00000164823.11	ENST00000297438.6	4209	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	56.78520934187	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCAAGTTCCACTAAA	11	False	NA	NA	False	AATAAA	-14	NA	89901858	89927868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079_89921172_89924502
transcript_135602.nic	chr8	+	1000	5	ISM	ENSG00000164823.11	ENST00000297438.6	4209	6	-9	6549	1	0	5prime_fragment	TRUE	canonical	3	62	junction_1	63.1441802543987	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGTTTTCATTTAGA	2	True	NA	NA	False	AATAAA	-28	NA	89901849	89921319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079
transcript_135605.known	chr8	+	1766	12	FSM	ENSG00000104325.7	ENST00000522161.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	171.437914936241	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	8	True	NA	NA	False	AATAAA	-13	NA	90001476	90051999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90001562_90005447_90005846_90006035_90006278_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_13561.nic	chr1	+	2034	5	ISM	ENSG00000143476.18	ENST00000366991.5	4409	15	-26	56191	-26	-51604	5prime_fragment	FALSE	canonical	3	412	junction_4	32.6840939908084	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACTCTGTTTTAAAAAT	-38	True	NA	NA	False	ACTAAA	-9	NA	212035721	212048822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296
transcript_135621.known	chr8	+	2760	10	FSM	ENSG00000104325.7	ENST00000220764.7	2760	10	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	38.5256047612782	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCAACCTTTTTT	8	True	NA	NA	False	AATAAA	-16	NA	90001476	90053633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90001562_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_135625.known	chr8	+	897	9	FSM	ENSG00000104325.7	ENST00000517597.5	897	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.276908555049	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTCTAATAAATTCTT	7	True	NA	NA	False	AATAGA	-34	NA	90001475	90051972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_135636.known	chr8	-	4622	16	FSM	ENSG00000104320.14	ENST00000265433.8	4622	16	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_13	19.4520493064927	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTATTTAAGTCAAAAG	-24	True	NA	-6	True	AATAAA	-19	NA	89984667	89933330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_135637.known	chr8	-	4523	16	FSM	ENSG00000104320.14	ENST00000409330.5	4523	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	48.1351800199766	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGATCTGTTTCTGGAC	239	False	NA	-5	True	ATTAAA	-38	NA	89984404	89933483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984207
transcript_135642.known	chr8	-	2533	11	FSM	ENSG00000104327.7	ENST00000265431.7	2533	11	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_10	27.3569004092203	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-1	True	NA	0	True	AATAAA	-22	NA	90082879	90058607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
transcript_135643.nnic	chr8	-	2343	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_10	84.1115925422887	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-1	True	NA	0	True	AATAAA	-22	NA	90082879	90058607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
transcript_13565.nic	chr1	-	1139	4	ISM	ENSG00000143493.13	ENST00000366993.7	3422	20	-9	75016	-6	3855	5prime_fragment	FALSE	canonical	3	176	junction_2	27.0924343682881	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGATTGGCTTCTCTTC	-9	True	NA	NA	False	ATTAAA	-24	NA	212035545	212016363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_212017024_212020121_212020269_212021082_212021213_212035343
transcript_135652.nnic	chr8	+	768	2	NNC	ENSG00000253394.7	novel	1053	5	NA	NA	460426	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTTTGTGCATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	90682020	90687866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_90682283_90687360
transcript_135653.known	chr8	-	4992	3	FSM	ENSG00000180694.14	ENST00000458549.7	4992	3	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	33	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCGCTTTTCTTT	4	True	NA	-7	True	AATAAA	-14	NA	90646083	90621999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90625863_90631551_90631708_90645110
transcript_135657.known	chr8	-	1174	2	FSM	ENSG00000180694.14	ENST00000422900.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTACACCTATTCACAA	613	False	NA	NA	False	NA	NA	NA	90645512	90625090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90625863_90645110
transcript_135658.known	chr8	+	5049	13	FSM	ENSG00000123119.12	ENST00000417640.7	5049	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	8.76665082381331	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTCTACAAATGAAAAA	-15	True	NA	NA	False	AATAAA	-16	NA	90791774	90959393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90791986_90801690_90801716_90824716_90824826_90872127_90872154_90881032_90881131_90917491_90917629_90925534_90925657_90928222_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
transcript_135660.nic	chr8	+	2745	6	ISM	ENSG00000123119.12	ENST00000417640.7	5049	13	136334	1690	-12083	-144	3prime_fragment	FALSE	canonical	3	33	junction_4	5.74108003776293	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAGAAAAAACTG	-13	True	NA	NA	False	AAAAAG	-19	NA	90928108	90957703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
transcript_135661.known	chr8	+	656	3	FSM	ENSG00000123119.12	ENST00000522729.5	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTCTGCCATTAATTTA	16	False	NA	NA	False	AATAAA	-2	NA	90791740	90825102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90791986_90801690_90801716_90824716
transcript_135662.known	chr8	-	1041	6	FSM	ENSG00000253250.3	ENST00000517562.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	34.2660181520993	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-1	True	NA	-17	True	AATAAA	-20	NA	90985238	90958470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90959031_90960741_90960849_90971065_90971142_90978578_90978653_90980362_90980462_90985113
transcript_13567.nnic	chr1	+	1173	3	NNC	ENSG00000143476.18	novel	4471	14	NA	NA	-23	-1405	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTTGAATGAATAGTCT	-35	True	NA	NA	False	AGTAAA	-13	NA	212035724	212103189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212035801_212100335_212101085_212102841
transcript_135675.nic	chr8	-	627	2	ISM	ENSG00000253250.3	ENST00000517562.3	1041	6	-3	21492	-3	-21492	5prime_fragment	FALSE	canonical	3	452	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAGCACAAATCTTAAAG	-4	True	NA	NA	False	ACTAAA	-15	NA	90985241	90979962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_90980462_90985113
transcript_135677.known	chr8	-	841	8	FSM	ENSG00000155099.8	ENST00000518869.1	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	162.938075128346	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTGCAAGGCGATTT	-16	True	NA	NA	False	NA	NA	NA	91040872	90995810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021405_91024288_91024367_91040643
transcript_135684.known	chr8	-	838	7	FSM	ENSG00000155099.8	ENST00000520014.1	838	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	150.662979305911	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATAAGAGTCAGTTATC	21	True	NA	NA	False	NA	NA	NA	91040835	90995716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021423_91040643
transcript_13569.nnic	chr1	+	2829	3	NNC	ENSG00000143476.18	novel	4471	14	NA	NA	-23	-161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	202	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATGTCCTTTTCTGAGC	-35	True	NA	14	True	AATAAA	-14	NA	212035724	212104845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212035801_212100335_212101085_212102841
transcript_135691.known	chr8	-	867	6	FSM	ENSG00000155099.8	ENST00000518359.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	147.321960345361	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTCCATTCTGGTTT	-5	True	NA	NA	False	TTTAAA	-12	NA	91040811	90995592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90995821_90996653_90996745_91018389_91018514_91020156_91020264_91021255_91021405_91040643
transcript_135696.known	chr8	+	1631	8	FSM	ENSG00000155100.11	ENST00000522894.5	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	96.2977949182766	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTGCTTTAATAATT	-14	True	NA	NA	False	AATATA	-24	NA	91070324	91085417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91076591_91076732_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_135698.known	chr8	+	3148	7	FSM	ENSG00000155100.11	ENST00000404789.8	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	13.0596920161065	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTGCTTGAATTGT	5	True	NA	NA	False	AATAAA	-21	NA	91070343	91087093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_13570.known	chr1	-	483	1	FSM	ENSG00000220749.4	ENST00000401418.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3805	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	39	False	NA	NA	False	NA	NA	NA	212052006	212051523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212051500_212052000
transcript_135705.known	chr8	-	2171	2	FSM	ENSG00000253738.3	ENST00000524003.1	2171	2	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	0	1054	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGGACTATGACTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	91070189	91067910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_91069823_91069930
transcript_135707.nnic	chr8	+	539	3	NNC	ENSG00000147606.9	novel	5094	18	NA	NA	-12090	-99232	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCATTATAACGTTCCC	NA	False	NA	NA	False	AATAAA	-12	NA	91197403	91219127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_91197525_91200612_91200793_91218889
transcript_135708.nnic	chr8	+	732	3	NNC	ENSG00000147606.9	novel	5094	18	NA	NA	-12153	-99102	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1	185	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTTTTTCCTGCTGTTT	NA	False	NA	14	True	AATAAA	-19	NA	91197340	91219257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_91197525_91200612_91200793_91218889
transcript_135710.known	chr8	-	7627	13	FSM	ENSG00000079102.16	ENST00000617740.4	7627	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	8.08762772524937	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-4	True	NA	1	True	AATAAA	-25	NA	92095654	91954966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095027_92095172_92095346
transcript_135713.known	chr8	-	2370	11	FSM	ENSG00000079102.16	ENST00000360348.6	2370	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	8.10925397308532	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAAGGGCATGAGCATT	8170	False	NA	NA	False	AAAAAG	-8	NA	92095215	91959786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92095027
transcript_135716.known	chr8	-	7483	12	FSM	ENSG00000079102.16	ENST00000614812.4	7483	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	7.85404038780188	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-4	True	NA	1	True	AATAAA	-25	NA	92095654	91954966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095346
transcript_135719.known	chr8	-	1596	6	FSM	ENSG00000205133.12	ENST00000378861.9	1596	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	47.8455849582801	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTCTCTTGAGATTT	-6	True	NA	NA	False	TATAAA	-5	NA	92966098	92885713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92921502_92921661_92954405_92954565_92966006
transcript_13572.known	chr1	-	468	1	FSM	ENSG00000225338.1	ENST00000416139.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTGAGTCTAGCTGGCT	11	False	NA	NA	False	NA	NA	NA	212309518	212309050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212309000_212309500
transcript_135720.known	chr8	-	1882	6	FSM	ENSG00000205133.12	ENST00000517858.5	1882	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.8453608673866	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTCCTGCTAGCCAA	5	True	NA	-16	True	AATAAA	-13	NA	92966087	92885348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886668_92891988_92892075_92916928_92917008_92921502_92921661_92954405_92954565_92966006
transcript_135725.known	chr8	-	3563	5	FSM	ENSG00000205133.12	ENST00000518748.5	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	27.8433115846517	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGCCTTTTAGTCCTC	-4	True	NA	-13	True	AATAAA	-18	NA	92966144	92883634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92954405_92954565_92966006
transcript_135726.known	chr8	-	3667	5	FSM	ENSG00000205133.12	ENST00000521988.6	3667	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	23.7526314331697	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCGGCATTTACCATT	-4	True	NA	-5	True	AATAAA	-22	NA	92966144	92883533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_135729.known	chr8	-	865	5	FSM	ENSG00000205133.12	ENST00000524037.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	45.9483405576306	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCTCAAATCACATTCAG	2	True	NA	NA	False	NA	NA	NA	92966109	92886232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886668_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_135731.known	chr8	-	1829	5	FSM	ENSG00000205133.12	ENST00000520430.5	1829	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.2011178734793	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAGAGAAGAAATCCTT	0	True	NA	-2	True	AATAAA	-27	NA	92966111	92885334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92921502_92921661_92966006
transcript_135736.known	chr8	-	774	4	FSM	ENSG00000205133.12	ENST00000521617.5	774	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	45.675181687895	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCTCAAATCACATTC	-3	True	NA	NA	False	NA	NA	NA	92966114	92886234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92966006
transcript_135738.known	chr8	-	1630	4	FSM	ENSG00000205133.12	ENST00000523580.5	1630	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.8275506109403	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGAAATATCTAAGG	-1	True	NA	13	True	AATAAA	-42	NA	92966123	92885319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886668_92891988_92892075_92916928_92917008_92966006
transcript_135743.nic	chr8	-	1660	3	ISM	ENSG00000205133.12	ENST00000522925.5	559	5	-14	28998	-13	1306	5prime_fragment	FALSE	canonical	3	64	junction_1	31.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGCCGGGCGTCGTGAT	NA	False	NA	NA	False	AATACA	-12	NA	92966157	92915660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_92917011_92954405_92954565_92966006
transcript_135744.nic	chr8	-	1653	3	ISM	ENSG00000205133.12	ENST00000518748.5	3563	5	-13	32030	-13	1302	5prime_fragment	FALSE	canonical	3	53	junction_1	37	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATTAGCCGGGCGTCG	NA	False	NA	NA	False	AATACA	-8	NA	92966157	92915664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_92917008_92954405_92954565_92966006
transcript_135746.nic	chr8	-	361	2	ISM	ENSG00000205133.12	ENST00000519792.1	567	3	-31	1257	0	-1257	5prime_fragment	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAGCATTATTGATTAC	-4	True	NA	NA	False	ATTAAA	-18	NA	92966144	92964733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_92964957_92966006
transcript_135751.nnic	chr8	-	422	3	NNC	ENSG00000246662.6	novel	790	6	NA	NA	-47154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGATTTTTGCCTTCT	NA	False	NA	NA	False	AATAAA	-34	NA	93339840	93213309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_93213521_93302924_93303035_93339739
transcript_135756.known	chr8	+	1943	10	FSM	ENSG00000188343.14	ENST00000518116.5	1943	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	171.792366780223	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGTCAATCATGGCT	37	True	NA	14	True	AATAAA	-19	NA	93700613	93729250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93724509_93724596_93726393_93726514_93728204
transcript_135758.known	chr8	+	1014	9	NNC	ENSG00000188343.14	novel	4198	9	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	156.114541282995	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	16	True	NA	NA	False	ACTAAA	-41	NA	93700592	93728389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705006_93709759_93709768_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_135760.known	chr8	+	4198	9	FSM	ENSG00000188343.14	ENST00000518322.6	4198	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	143.352493874366	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCATAGCAAGCAGGAT	-27	True	NA	NA	False	NA	NA	NA	93700549	93731527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_135764.known	chr8	+	914	8	FSM	ENSG00000188343.14	ENST00000423990.6	914	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	170.813898015068	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	5	True	NA	NA	False	ACTAAA	-41	NA	93700581	93728389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93726393_93726514_93728204
transcript_135780.known	chr8	+	1072	4	FSM	ENSG00000188343.14	ENST00000522324.5	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	47.5137407026173	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGACTTTCTTAAACTA	-27	True	NA	NA	False	NA	NA	NA	93700549	93705552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908
transcript_135782.known	chr8	-	8530	4	FSM	ENSG00000183808.12	ENST00000520560.6	8530	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	39.1946708395698	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	9	True	NA	-4	True	AATAAA	-19	NA	93741009	93728154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_93736439_93737306_93737356_93740628_93740697_93740880
transcript_135783.known	chr8	-	8470	3	FSM	ENSG00000183808.12	ENST00000399300.7	8470	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	29.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	1	True	NA	-4	True	AATAAA	-19	NA	93741017	93728154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_93736439_93737306_93737356_93740880
transcript_135784.nic	chr8	-	740	2	ISM	ENSG00000183808.12	ENST00000520560.6	8530	4	-53	11984	-45	-9506	5prime_fragment	FALSE	canonical	3	42	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGGTTGGTGTAGATTA	1	True	NA	NA	False	TATAAA	-24	NA	93741062	93740138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_93740697_93740880
transcript_135785.known	chr8	+	1284	10	FSM	ENSG00000188343.14	ENST00000452913.6	1284	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	158.085771374628	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATTGCATACCAGT	-1	True	NA	NA	False	ATTAAA	-33	NA	93700506	93728456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93726393_93726514_93727130_93727245_93728204
transcript_135786.known	chr8	+	1179	9	FSM	ENSG00000188343.14	ENST00000359421.9	1179	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	153.831431687416	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGGCTTTAAAAAATATT	-15	True	NA	NA	False	ATTAAA	-23	NA	93700561	93728446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93707201_93707282_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_135788.known	chr8	+	4134	29	FSM	ENSG00000164953.17	ENST00000684064.1	4134	29	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.7813749726608	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATGAAAATATATACTAAA	NA	False	NA	-15	True	TATAAA	-19	NA	93754843	93817637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93754910_93755019_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_135789.known	chr8	+	4678	28	FSM	ENSG00000164953.17	ENST00000453321.8	4678	28	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_18	11.8269414139868	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCGACTCCTTTGTTC	-14	True	NA	72	True	CATAAA	-21	NA	93754893	93818121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_13579.known	chr1	-	2119	9	FSM	ENSG00000065600.13	ENST00000535273.2	2119	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	58.9712588893946	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAGTGTGACAATATGAA	-32	True	NA	-12	True	AATAAA	-16	NA	212414901	212364475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212413897_212414081_212414721
transcript_135794.known	chr8	+	2535	19	FSM	ENSG00000164953.17	ENST00000453906.6	2535	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.2344465432865	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCATGTTTTGTGTGC	-14	True	NA	-43	True	NA	NA	NA	93754893	93816860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_13580.known	chr1	-	2469	8	FSM	ENSG00000065600.13	ENST00000261455.9	2469	8	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_2	17.8279761805393	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTGCCACTTTTCTG	-17	True	NA	NA	False	ATTAAA	-20	NA	212414886	212363927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_135800.known	chr8	+	1319	3	FSM	ENSG00000164953.17	ENST00000475305.1	1319	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	4	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAATATCATTGTT	-2	True	NA	NA	False	NA	NA	NA	93754905	93759480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777_93755867_93758482
transcript_135804.known	chr8	+	1579	2	FSM	ENSG00000164953.17	ENST00000481620.1	1579	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCCTGTATAAATGTAT	4	True	NA	NA	False	AATAAA	-43	NA	93754911	93757130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777
transcript_135805.known	chr8	+	1249	2	FSM	ENSG00000164953.17	ENST00000684733.1	1249	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAATATCATTGTTTACA	-17	True	NA	NA	False	NA	NA	NA	93754890	93759484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93758482
transcript_135806.known	chr8	+	3296	29	FSM	ENSG00000164953.17	ENST00000323130.8	3296	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	19.373082525262	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGATTACTGATCTCAAT	7	True	NA	NA	False	AATAAA	-21	NA	93754914	93819234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371_93816516_93818989
transcript_135807.known	chr8	+	4210	2	FSM	ENSG00000164951.16	ENST00000297598.5	4210	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	12	True	NA	23	True	ATTAAA	-22	NA	93916922	93926068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93917080_93922015
transcript_135808.known	chr8	+	2140	2	FSM	ENSG00000164951.16	ENST00000517764.1	2140	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGATGACCTGGCAAATA	0	True	NA	NA	False	NA	NA	NA	93917746	93923956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93917946_93922015
transcript_135809.known	chr8	+	2554	3	FSM	ENSG00000164951.16	ENST00000520728.5	2554	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTATTTGTATTAA	23	True	NA	NA	False	AAGAAA	-9	NA	93916933	93924388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93917080_93917910_93917946_93922015
transcript_13581.nnic	chr1	-	681	3	NNC	ENSG00000287445.1	novel	1727	2	NA	NA	-55	308	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGGTGGTCTTCT	NA	False	NA	1	True	AATAAA	-22	NA	212432830	212429960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_212430332_212431740_212431845_212432624
transcript_135810.known	chr8	-	354	1	FSM	ENSG00000240509.1	ENST00000466433.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAACTTTTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	93957691	93957337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_93957300_93957700
transcript_135811.nnic	chr8	+	291	2	Antisense	novelGene_ENSG00000079112.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTTGTGGTGTTTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	94144157	94179063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_94144274_94178888
transcript_135813.known	chr8	-	2187	5	FSM	ENSG00000164949.8	ENST00000297596.3	2187	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	9.90896059130321	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-2	True	NA	NA	False	AATAAA	-23	NA	94262319	94249252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262089
transcript_135814.known	chr8	-	2103	5	FSM	ENSG00000164949.8	ENST00000396194.6	2103	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	8.86002257333467	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	94262350	94249252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262204
transcript_135816.known	chr8	-	3074	15	FSM	ENSG00000197275.14	ENST00000336148.10	3074	15	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_12	20.6526175640014	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAATAATTCCTTG	2	True	NA	-1	True	AATAAA	-21	NA	94475115	94371959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_135820.nic	chr8	-	1788	10	ISM	ENSG00000197275.14	ENST00000336148.10	3074	15	-46	19847	-46	0	5prime_fragment	FALSE	canonical	3	129	junction_7	23.0801074092971	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCCCACCTAAAATAGA	NA	False	NA	NA	False	AATAAA	-1	NA	94475161	94391806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_135823.nic	chr8	-	2796	4	ISM	ENSG00000197275.14	ENST00000336148.10	3074	15	-46	37041	-46	-1479	5prime_fragment	FALSE	canonical	3	129	junction_1	34.0032678168176	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTATGTGAAACAAAGTT	NA	False	NA	NA	False	NA	NA	NA	94475161	94409000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_94411316_94458267_94458437_94467404_94467556_94475000
transcript_135825.known	chr8	-	1879	4	FSM	ENSG00000197275.14	ENST00000297592.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	54.1623075169029	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAATTCTTAAAGCATA	11	True	NA	NA	False	AATAAA	-1	NA	94475062	94431159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94432657_94458267_94458437_94467404_94467556_94475000
transcript_135827.nic	chr8	-	1308	2	ISM	ENSG00000197275.14	ENST00000297592.5	1879	4	-99	35249	-46	-35249	5prime_fragment	FALSE	canonical	3	206	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATACTGGAAGCAGTCT	NA	False	NA	NA	False	NA	NA	NA	94475161	94466408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_94467556_94475000
transcript_13583.known	chr1	+	916	4	FSM	ENSG00000117691.10	ENST00000366988.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	46.0072458061409	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCTTCCCCAGAGGCCA	-1	True	NA	27	True	AATAAA	-22	NA	212432919	212446379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212433121_212442564_212442626_212444338_212444443_212445829
transcript_135830.known	chr8	-	2472	12	FSM	ENSG00000265817.4	ENST00000517506.2	2472	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	47.0315526231992	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAGAAAAGATCTATC	-9	True	NA	NA	False	CATAAA	-41	NA	94436952	94378376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94436494
transcript_135831.known	chr8	-	5391	2	FSM	ENSG00000265817.4	ENST00000481490.3	5391	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGTGTACTTTTTTT	-1	True	NA	-3	True	AATACA	-16	NA	94436944	94427715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94432657_94436494
transcript_135832.known	chr8	-	3924	13	FSM	ENSG00000164944.12	ENST00000421249.2	3924	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	11.9660979437743	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCTTCCTGAACAGTTT	NA	False	NA	-1	True	ATTAAA	-37	NA	94553529	94510732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94511730_94511995_94512090_94514868_94514952_94517787_94517943_94518984_94519477_94526222_94527364_94529069_94529343_94530962_94531086_94534838_94535008_94537102_94537152_94538259_94538347_94543826_94543943_94553384
transcript_135835.known	chr8	+	1789	2	FSM	ENSG00000253704.3	ENST00000523011.1	1789	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGCCGGGCGAGG	-10	True	NA	NA	False	ACTAAA	-10	NA	94553721	94569745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94553908_94568142
transcript_135838.nnic	chr8	-	669	3	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-37	-5	multi-exon	FALSE	canonical	2	3	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGAGGACATTTTGCT	1698	False	NA	-12	True	ATTAAA	-15	NA	94639504	94637289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94638036_94638108_94639359
transcript_135842.nnic	chr8	-	594	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-27	1	multi-exon	FALSE	canonical	3	17	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACATTTTGCTGCCACC	1708	False	NA	-6	True	ATTAAA	-21	NA	94639494	94637283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94639359
transcript_135843.nnic	chr8	-	519	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-27	-74	multi-exon	FALSE	canonical	3	17	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTATAAGGGAATTATTA	1708	False	NA	-12	True	AATAAA	-18	NA	94639494	94637358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94639359
transcript_135844.nnic	chr8	-	314	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-27	-279	multi-exon	FALSE	canonical	3	17	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTTTTATATCCATGT	1708	False	NA	NA	False	AATAAA	-26	NA	94639494	94637563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94639359
transcript_135845.known	chr8	-	2183	1	FSM	ENSG00000261437.1	ENST00000562760.1	2183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACATTTTGCTGCCAC	-5	True	NA	-7	True	ATTAAA	-20	NA	94639467	94637284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94637300_94639500
transcript_135847.known	chr8	+	3768	16	FSM	ENSG00000104413.18	ENST00000433389.8	3768	16	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_14	116.081503933898	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	7	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94696851_94696962_94705924
transcript_13585.known	chr1	+	845	3	FSM	ENSG00000117691.10	ENST00000479589.5	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	327	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGAATTCTTCCCCA	2	True	NA	20	True	AATAAA	-15	NA	212432922	212446372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212433121_212444338_212444443_212445829
transcript_135852.known	chr8	+	3746	15	FSM	ENSG00000104413.18	ENST00000423620.6	3746	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	193.637903714903	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	69	False	NA	20	True	AATAAA	-21	NA	94641073	94707466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94705924
transcript_135855.nic	chr8	+	3810	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_13	136.522723682296	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	390	False	NA	20	True	AATAAA	-21	NA	94640980	94707466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_135856.known	chr8	+	3465	14	FSM	ENSG00000104413.18	ENST00000454170.7	3465	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	182.704631163309	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	37	False	NA	20	True	AATAAA	-21	NA	94641203	94707466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94705924
transcript_135869.nic	chr8	+	1686	10	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-218	38893	-93	0	5prime_fragment	FALSE	canonical	3	524	junction_4	45.7005821612432	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGCATGAAAATAGTCT	390	False	NA	12	True	AATAAA	-22	NA	94640980	94668365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948
transcript_135875.nic	chr8	+	540	2	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-218	65233	-93	-4427	5prime_fragment	FALSE	canonical	3	654	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATAGACGTCGAAAGC	390	False	NA	NA	False	AAGAAA	-1	NA	94640980	94642025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_94641451_94641955
transcript_135876.known	chr8	+	1813	1	FSM	ENSG00000104413.18	ENST00000523347.1	1813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	88	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	893	False	NA	20	True	AATAAA	-21	NA	94705653	94707466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94705700_94707500
transcript_135877.known	chr8	+	6197	19	FSM	ENSG00000156162.16	ENST00000414645.6	6197	19	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_7	17.4540843852777	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	0	True	NA	10	True	AATAAA	-19	NA	94719899	94793836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
transcript_135885.known	chr8	+	1196	10	FSM	ENSG00000156170.13	ENST00000517976.5	1196	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	91.8341231397105	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCATTGATGTTAATTCT	19	True	NA	7	True	ATTAAA	-9	NA	95025020	95057946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95036301_95036495_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_135886.nic	chr8	+	1071	10	NIC	ENSG00000156170.13	novel	1196	10	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	90.1325498541447	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTTAATTCTAGTCTA	24	True	NA	13	True	ATTAAA	-15	NA	95025082	95057952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_95025206_95031994_95032099_95035453_95035577_95036370_95036495_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_135890.known	chr8	+	946	9	FSM	ENSG00000156170.13	ENST00000454358.6	946	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	57.8509669322821	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTCATGGCATTGA	9	True	NA	-3	True	AAAACA	-6	NA	95025067	95057936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_13590.nnic	chr1	-	571	3	Antisense	novelGene_ENSG00000286213.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGCCACCTTTCTTTACT	NA	False	NA	-1	True	ATTAAA	-13	NA	212515463	212513903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_212514225_212514523_212514633_212515322
transcript_135902.known	chr8	+	4645	27	FSM	ENSG00000164941.14	ENST00000523731.6	4645	27	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_11	30.7036801756949	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATGGGAAGAAATCAT	-2	True	NA	NA	False	NA	NA	NA	94823286	94881746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94823562_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
transcript_135905.known	chr8	-	2674	12	FSM	ENSG00000175305.18	ENST00000308108.9	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	15.9103895573857	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGGAGA	0	True	NA	11	True	AATAAA	-32	NA	94895201	94880223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_135907.known	chr8	-	3330	12	FSM	ENSG00000175305.18	ENST00000520509.5	3330	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	28.5225733425763	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCAGCACTATGGTAGCA	8	True	NA	NA	False	NA	NA	NA	94896678	94879769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94896451
transcript_135908.nic	chr8	-	1359	11	ISM	ENSG00000175305.18	ENST00000396133.7	1361	12	14	350	14	-350	5prime_fragment	FALSE	canonical	3	53	junction_10	16.5918654767931	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGATTTGTGAAGTGTCT	1446	False	NA	3	True	AATAAA	-18	NA	94895240	94881963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_135913.known	chr8	+	597	3	FSM	ENSG00000164941.14	ENST00000523808.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTTTACCTCCGACCAC	NA	False	NA	NA	False	AGTAAA	-37	NA	94822850	94827353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94823182_94824892_94825068_94827262
transcript_135914.known	chr8	+	558	2	FSM	ENSG00000243979.2	ENST00000391360.2	558	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCACTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	94891238	94892107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94891377_94891687
transcript_135915.known	chr8	+	2901	2	FSM	ENSG00000175895.4	ENST00000315367.4	2901	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTCTGTATATT	5	True	NA	7	True	AATAAA	-18	NA	95133784	95156685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_95134031_95154030
transcript_135921.known	chr8	+	617	5	FSM	ENSG00000253773.4	ENST00000521905.1	617	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.73205080756888	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTCAGTGGCTCAGCT	-1	True	NA	NA	False	NA	NA	NA	95268835	95653710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_95268891_95301121_95301193_95432625_95432781_95610663_95610703_95653413
transcript_135928.known	chr8	-	3340	6	FSM	ENSG00000156172.6	ENST00000286688.6	3340	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	3.87814388593306	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCATTTTGATGTT	2	True	NA	-4	True	AGTAAA	-24	NA	95269201	95244912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_95247771_95252187_95252284_95259839_95259906_95260467_95260533_95263686_95263775_95269034
transcript_13593.known	chr1	+	332	3	FSM	ENSG00000228067.1	ENST00000423842.1	332	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTTAGGTGCAAAACAAG	2553	False	NA	NA	False	AATAAA	-16	NA	212545693	212556065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212545766_212554411_212554449_212555842
transcript_135931.known	chr8	+	93	1	FSM	ENSG00000253945.1	ENST00000523014.1	93	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATCATGAA	NA	False	NA	NA	False	NA	NA	NA	95403801	95403894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_95403800_95403900
transcript_135938.known	chr8	-	595	5	FSM	ENSG00000156467.10	ENST00000518406.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2664.83361347383	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGGAGTTTTTGAA	2	True	NA	-48	True	AATAAA	-10	NA	96235539	96230941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96231133_96231378_96231516_96231773_96231941_96233155_96233228_96235511
transcript_135939.known	chr8	-	515	4	FSM	ENSG00000156467.10	ENST00000517523.1	515	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	2814.33722215373	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGTTTTTGAATTC	2339	False	NA	-45	True	AATAAA	-13	NA	96233219	96230938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96231133_96231531_96231622_96231773_96231941_96233155
transcript_13594.known	chr1	+	581	3	FSM	ENSG00000162772.17	ENST00000613104.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAAGTGCATCTTTGCCT	110	False	NA	NA	False	NA	NA	NA	212615177	212619746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212615262_212618126_212618235_212619357
transcript_135950.known	chr8	-	1463	8	FSM	ENSG00000156469.9	ENST00000287025.4	1463	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_7	40.0015305829613	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGAAACCATTTGATAC	-8	True	NA	14	True	AATAAA	-36	NA	96261610	96239401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
transcript_135959.known	chr8	-	776	5	FSM	ENSG00000156469.9	ENST00000524341.5	776	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	187.522498650162	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAAATGCCTCGGGTCT	4532	False	NA	-13	True	AATAAA	-9	NA	96257070	96239428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96239686_96245859_96245932_96246306_96246455_96250905_96251096_96256961
transcript_135960.known	chr8	+	4990	13	FSM	ENSG00000156471.13	ENST00000517309.6	4990	13	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	30.6113631770223	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	96261901	96336995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96262220_96273298_96273391_96284108_96284154_96287021_96287147_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_135965.known	chr8	+	2366	11	FSM	ENSG00000156471.13	ENST00000337004.8	2366	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.0311118726137	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTCTGTAAAATGCTC	-2	True	NA	30	True	AATAAA	-27	NA	96261912	96334552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96262220_96273298_96273391_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_135972.known	chr8	+	677	5	FSM	ENSG00000169439.12	ENST00000522911.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	342.359734051772	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGCCATTCTGGCACT	195	False	NA	NA	False	AATAAA	-44	NA	96494007	96609643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96494044_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_135974.known	chr8	+	3307	5	FSM	ENSG00000169439.12	ENST00000302190.9	3307	5	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_1	45.7684389071771	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTTCTTCAACTGTA	0	True	NA	27	True	AATAAA	-40	NA	96493812	96611790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96494332_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_135987.known	chr8	+	1932	8	FSM	ENSG00000104324.16	ENST00000220763.10	1932	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	2.39045721866879	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTTCATTTATG	-5	True	NA	14	True	AATAAA	-19	NA	96645241	97143501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96645403_96784863_96785331_96834972_96835181_96879797_96880006_96965934_96966047_97029402_97029495_97066008_97066211_97143019
transcript_135988.known	chr8	+	565	6	FSM	ENSG00000147649.10	ENST00000521933.1	565	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	123.939662739577	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAATCTCCCAAACAAATA	NA	False	NA	NA	False	NA	NA	NA	97691130	97724617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97722878_97723036_97724599
transcript_13599.known	chr1	-	836	3	FSM	ENSG00000123685.9	ENST00000243440.2	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCGTCTTCTGTCTTCT	-7	True	NA	-1	True	AATACA	-16	NA	212699840	212686416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212686980_212696960_212697066_212699672
transcript_135993.known	chr8	+	432	1	FSM	ENSG00000243504.1	ENST00000491662.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATGGTGAAAACACT	26	False	NA	NA	False	NA	NA	NA	97865053	97865485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_97865100_97865500
transcript_135994.known	chr8	+	4133	19	FSM	ENSG00000132561.14	ENST00000254898.7	4133	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_16	13.3425893798027	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGACTTTAAAAAGAATGA	-19	True	NA	NA	False	AATAAA	-20	NA	97869063	98036724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660_98003784_98007104_98007228_98007478_98007602_98016539_98016663_98017993_98018117_98021204_98021328_98027415_98027830_98030461_98030615_98032245_98032318_98033041_98033177_98033560_98033660_98035656
transcript_135996.known	chr8	+	2031	8	FSM	ENSG00000132561.14	ENST00000523490.1	2031	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	10.860901604999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	30	True	NA	NA	False	NA	NA	NA	97869112	98004286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660
transcript_136003.known	chr8	-	1129	5	FSM	ENSG00000156482.11	ENST00000521726.1	1129	5	0	0	0	0	multi-exon	FALSE	canonical	2	141	junction_4	2736.49323953121	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAACCTTTTCACCTAC	NA	False	NA	-104	True	NA	NA	NA	98046469	98041806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045714
transcript_136010.known	chr8	-	440	5	FSM	ENSG00000156482.11	ENST00000396070.6	440	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	2433.02511033076	4936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	0	True	NA	-18	True	AATAAA	-19	NA	98045544	98041720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042719_98044942_98045089_98045346_98045400_98045507
transcript_136011.known	chr8	-	498	5	FSM	ENSG00000156482.11	ENST00000287038.8	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	3950	junction_4	1118.44520987843	95432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-1	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045507
transcript_136012.known	chr8	-	575	4	FSM	ENSG00000156482.11	ENST00000521291.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	5892	junction_1	390.027634348588	23455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	588	False	NA	-18	True	AATAAA	-19	NA	98045514	98041720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346
transcript_136013.known	chr8	-	614	5	FSM	ENSG00000156482.11	ENST00000518850.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2538.33843291236	2952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-1	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98044826_98045089_98045346_98045400_98045507
transcript_136014.known	chr8	-	274	4	FSM	ENSG00000156482.11	ENST00000523172.5	274	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2446.16725148184	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCACCTACAAAATTT	-2	True	NA	-97	True	AGTAAA	-1	NA	98045546	98041799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98045346_98045400_98045507
transcript_136015.known	chr8	-	631	3	FSM	ENSG00000156482.11	ENST00000517489.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	3950	junction_2	1440.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCTTTTTAAATCATAA	552	False	NA	NA	False	NA	NA	NA	98045550	98042644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98042776_98044942_98045400_98045507
transcript_136016.known	chr8	-	573	2	FSM	ENSG00000156482.11	ENST00000521112.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	3950	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGTACCATGAACTCG	554	False	NA	NA	False	AATATA	-19	NA	98045548	98044867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98045400_98045507
transcript_136018.known	chr8	+	1503	3	FSM	ENSG00000177459.11	ENST00000318528.8	1503	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGGGTGACTTTCT	-3	True	NA	7	True	AATAAA	-19	NA	98064567	98093609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98064728_98089075_98090030_98093220
transcript_136019.known	chr8	+	596	2	FSM	ENSG00000177459.11	ENST00000545282.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGGTGACTTTCTT	32	False	NA	8	True	AATAAA	-20	NA	98064521	98093610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98064728_98093220
transcript_136022.known	chr8	-	884	6	FSM	ENSG00000132541.11	ENST00000522791.5	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	216.806272971978	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGTTATATAGATAATA	8	True	NA	15	True	ATTAAA	-38	NA	98117159	98102396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108714_98117031
transcript_136023.known	chr8	-	761	5	FSM	ENSG00000132541.11	ENST00000521560.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	233.73917087215	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGCTTTTACTTGAG	-4	True	NA	-52	True	TTTAAA	-39	NA	98117171	98102463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98117031
transcript_136024.known	chr8	-	848	6	FSM	ENSG00000132541.11	ENST00000520507.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	223.022510074656	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTGTTTAAATTTGAG	57	False	NA	-27	True	AGTAAA	-2	NA	98117110	98102438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108769_98117031
transcript_136025.known	chr8	-	271	2	FSM	ENSG00000132541.11	ENST00000519155.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGGGAGTCAACTGTC	53	False	NA	NA	False	AAGAAA	-33	NA	98117114	98113637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98113826_98117031
transcript_136027.known	chr8	+	4739	16	FSM	ENSG00000104356.11	ENST00000401707.7	4739	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	8.67845352326989	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGTTGTGAATATTTA	-21	True	NA	12	True	AATAAA	-17	NA	98117292	98159835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98117391_98123335_98123480_98127594_98127763_98128364_98128541_98129977_98130227_98133948_98134037_98134471_98134660_98136481_98136739_98136860_98136955_98140077_98140190_98140768_98140889_98146567_98146684_98148814_98149007_98150484_98150640_98156049_98156413_98157616
transcript_136033.known	chr8	+	585	5	FSM	ENSG00000104356.11	ENST00000522319.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	26.0672207954741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACATGAACCGGACGCT	-17	True	NA	NA	False	AATAAA	-19	NA	98117296	98130040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98117331_98123335_98123480_98127594_98127763_98128364_98128541_98129977
transcript_136040.known	chr8	-	2833	11	FSM	ENSG00000104375.17	ENST00000419617.7	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	22.7861800221099	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCGTTTCTGTATCTTT	-11	True	NA	-2	True	AATAAA	-21	NA	98825688	98454632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_136044.known	chr8	-	2485	9	FSM	ENSG00000104375.17	ENST00000617590.1	2485	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	53.9252955485642	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTTTCTGTATCTTTGT	6	True	NA	0	True	AATAAA	-23	NA	98825671	98454630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_136049.nic	chr8	-	1416	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-34	124745	-34	292	5prime_fragment	FALSE	canonical	3	129	junction_4	14.6663574488121	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGTGTCATATCT	-45	True	NA	-3	True	AATAAA	-17	NA	98825722	98579377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_136050.nic	chr8	-	1226	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-34	124935	-34	102	5prime_fragment	FALSE	canonical	3	129	junction_4	14.6663574488121	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTAAGATATGTTTTTTC	-45	True	NA	70	True	ATTAAA	-22	NA	98825722	98579567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_136051.nic	chr8	-	1744	7	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-34	140659	-34	38	5prime_fragment	FALSE	canonical	3	129	junction_3	15.8052382315344	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTTTCCAAAGTCCCAT	-45	True	NA	NA	False	AAAAAG	-23	NA	98825722	98595291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_136055.known	chr8	+	693	2	FSM	ENSG00000164920.10	ENST00000520791.5	693	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGCTCAGCTCTAGACA	2639	False	NA	NA	False	NA	NA	NA	98944402	98946302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98944824_98946030
transcript_136060.nic	chr8	+	866	4	ISM	ENSG00000132549.20	ENST00000682806.1	2591	7	-17	18087	-7	-18087	5prime_fragment	FALSE	canonical	3	20	junction_1	0.942809041582063	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGATCATTGTTTTA	-26	True	NA	NA	False	NA	NA	NA	99013258	99096768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311
transcript_136062.known	chr8	+	3800	21	FSM	ENSG00000132549.20	ENST00000683869.1	3800	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_19	5.30919014539883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCATCAATATATAATTAAAA	11	True	NA	NA	False	AATAAA	-21	NA	99013295	99392341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556
transcript_136064.known	chr8	-	380	2	FSM	ENSG00000253948.3	ENST00000521696.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTTTTAATTTCTAA	282	False	NA	-11	True	AATAAA	-19	NA	99013044	98996762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98996967_99012868
transcript_136068.known	chr8	-	513	4	FSM	ENSG00000164919.11	ENST00000524245.5	513	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1932.8856378195	3348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGACAGTAAGTCTTT	575	False	NA	-15	True	AATAAA	-13	NA	99893135	99878149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893012
transcript_136070.known	chr8	-	694	4	FSM	ENSG00000164919.11	ENST00000522940.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	1861.92469116115	2522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGGACAGTAAGTCTT	1	True	NA	-16	True	AATAAA	-12	NA	99893623	99878150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893318
transcript_136075.known	chr8	-	571	4	FSM	ENSG00000164919.11	ENST00000520271.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	1824.80629108955	11320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	88	False	NA	-14	True	AATAAA	-14	NA	99893622	99878148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893442
transcript_136076.known	chr8	-	429	4	FSM	ENSG00000164919.11	ENST00000517682.6	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	1835.14256182516	30460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-1	True	NA	-14	True	AATAAA	-14	NA	99893681	99878148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892048_99893638
transcript_136083.known	chr8	+	947	4	FSM	ENSG00000147669.11	ENST00000353107.8	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_3	202.374789822141	8030	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTCACTGTGTCA	-13	True	NA	30	True	AATAAA	-16	NA	100150635	100154003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_100150710_100151346_100151417_100151823_100151917_100153293
transcript_136084.known	chr8	+	1723	10	FSM	ENSG00000104450.13	ENST00000520643.5	1723	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.57240820062005	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGCTATGTGTGTTTT	4179	False	NA	NA	False	AATGAA	-12	NA	100157905	100194680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_100158119_100162278_100162421_100165813_100165974_100177815_100177942_100183374_100183437_100183955_100184063_100184627_100184734_100187119_100187251_100191389_100191497_100194111
transcript_136091.known	chr8	-	4186	10	FSM	ENSG00000034677.13	ENST00000341084.7	4186	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	9.01165226488516	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTTCTGGTGTGTA	-1	True	NA	-10	True	AATAAA	-17	NA	100309953	100257066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100259247_100259853_100259998_100261541_100261756_100264033_100264196_100264670_100264786_100268784_100268948_100269868_100270014_100274952_100275162_100287500_100288268_100309866
transcript_136098.nic	chr8	-	580	2	ISM	ENSG00000034677.13	ENST00000341084.7	4186	10	-213	30921	-18	-81	5prime_fragment	FALSE	canonical	3	58	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTTCAATAGGCTCC	3293	False	NA	NA	False	AAAAAG	-14	NA	100310166	100287987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_100288268_100309866
transcript_136099.known	chr8	-	2779	6	FSM	ENSG00000186106.11	ENST00000519597.5	2779	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	35.6	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-22	True	NA	-2	True	AATAAA	-21	NA	100559784	100520771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100532355_100532461_100533208_100533312_100559710
transcript_136102.known	chr8	-	3270	5	FSM	ENSG00000186106.11	ENST00000520311.5	3270	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	36.9078243737016	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCACGATTTCTCTTTT	51	False	NA	-6	True	AATAAA	-17	NA	100559711	100520775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559037
transcript_136103.nic	chr8	-	2805	5	NIC	ENSG00000186106.11	novel	2649	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	33.0567693521312	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	26	True	NA	-2	True	AATAAA	-21	NA	100559736	100520771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559531
transcript_136104.known	chr8	-	2649	5	FSM	ENSG00000186106.11	ENST00000335659.7	2649	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	8.87059749960509	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	3	True	NA	-2	True	AATAAA	-21	NA	100559759	100520771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559710
transcript_136107.known	chr8	-	661	4	FSM	ENSG00000186106.11	ENST00000358990.3	661	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.5490101262931	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGATCTTCGTCAT	3	True	NA	NA	False	NA	NA	NA	100559759	100522656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100559710
transcript_136111.known	chr8	-	2401	16	FSM	ENSG00000070756.17	ENST00000519004.5	2401	16	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_15	2021.74887549259	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAAAGAATTTTCAGCA	-1	True	NA	-58	True	AGTAAA	-33	NA	100722087	100703098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390_100721453_100721728
transcript_136119.known	chr8	-	2861	15	FSM	ENSG00000070756.17	ENST00000318607.10	2861	15	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	768.935949802036	5852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGATTTGCTTTTTTTCA	-2	True	NA	-16	True	AATAAA	-17	NA	100722088	100702915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_136131.known	chr8	-	3395	14	FSM	ENSG00000070756.17	ENST00000678709.1	3395	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_10	754.839071371269	2800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	1169	False	NA	NA	False	NA	NA	NA	100721559	100702050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100718281_100721390
transcript_136132.known	chr8	-	3145	14	FSM	ENSG00000070756.17	ENST00000677787.1	3145	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_9	2168.19103833085	2682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATCTAAACAAAAC	1083	False	NA	NA	False	NA	NA	NA	100721645	100702050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_136136.known	chr8	-	3116	14	FSM	ENSG00000070756.17	ENST00000523555.6	3116	14	0	0	0	0	multi-exon	FALSE	canonical	3	6497	junction_9	797.822561874936	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGACTTTCAGGTGGT	141	False	NA	4	True	ATTAAA	-35	NA	100722587	100704096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_136147.known	chr8	-	487	5	FSM	ENSG00000070756.17	ENST00000517990.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_3	3541.0152057708	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAAAAAAACATTGCAA	0	True	NA	2	True	AAGAAA	-31	NA	100706779	100703284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705030_100705588_100705674_100706650
transcript_136148.known	chr8	-	631	4	FSM	ENSG00000070756.17	ENST00000518196.5	631	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	3340.28195749334	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTATTGAAAAAATGAATGG	692	False	NA	0	True	NA	NA	NA	100722036	100717816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100717889_100718086_100718281_100721390_100721453_100721733
transcript_136149.known	chr8	-	453	2	FSM	ENSG00000070756.17	ENST00000519363.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCGGGTCTGCAGGGAC	-1	True	NA	NA	False	NA	NA	NA	100722087	100721468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100721887_100722052
transcript_136150.known	chr8	+	348	1	FSM	ENSG00000212994.5	ENST00000475156.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	119	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	20	False	NA	NA	False	NA	NA	NA	100895770	100896118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_100895800_100896100
transcript_136155.known	chr8	-	891	6	FSM	ENSG00000164924.18	ENST00000419477.6	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	1764.52740415104	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATCCATGCTGTCCC	12	True	NA	NA	False	NA	NA	NA	100951276	100920641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951185
transcript_136156.known	chr8	-	2974	6	FSM	ENSG00000164924.18	ENST00000395956.7	2974	6	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_5	1656.67891880111	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	5333	False	NA	-14	True	NA	NA	NA	100951449	100918682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951234
transcript_136157.known	chr8	-	994	6	FSM	ENSG00000164924.18	ENST00000395953.6	994	6	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_5	1683.73387445879	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTACTTCTATTTGAAT	5188	False	NA	NA	False	NA	NA	NA	100951594	100920586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951455
transcript_136158.known	chr8	-	2829	6	FSM	ENSG00000164924.18	ENST00000353245.7	2829	6	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_5	1723.52886833961	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGTTTTGTTGCTTG	-5	True	NA	13	True	NA	NA	NA	100953341	100918685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100953268
transcript_136159.known	chr8	-	964	6	FSM	ENSG00000164924.18	ENST00000395951.7	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_5	1715.17112848835	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCCACAAATAGTTTT	6	True	NA	NA	False	NA	NA	NA	100950557	100920629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100950405
transcript_136169.known	chr8	-	1399	5	FSM	ENSG00000164924.18	ENST00000521309.5	1399	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	1945.47751207769	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAATAACTTGAGATGAT	-4	True	NA	54	True	NA	NA	NA	100952019	100919828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100951928
transcript_13617.known	chr1	-	685	3	FSM	ENSG00000117697.15	ENST00000487995.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	7.5	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAGTTATAGTGAGT	-2	True	NA	NA	False	AATGAA	-3	NA	212791782	212784140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212784494_212787558_212787638_212791529
transcript_136172.known	chr8	-	876	4	FSM	ENSG00000164924.18	ENST00000517727.5	876	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	2039.0720656438	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATGCAATTACTGAGA	6242	False	NA	NA	False	NA	NA	NA	100950540	100923986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100924299_100924915_100925040_100948595_100948901_100950405
transcript_136175.known	chr8	-	883	4	FSM	ENSG00000164924.18	ENST00000518736.5	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	2001.8313282259	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGCAATTACTGAGAGA	5187	False	NA	NA	False	NA	NA	NA	100951595	100923984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100924299_100924915_100925040_100948595_100948901_100951455
transcript_136178.known	chr8	-	3007	6	FSM	ENSG00000164924.18	ENST00000457309.2	3007	6	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_5	1513.1360282539	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-30	True	NA	-37	True	AATAAA	-11	NA	100952993	100918578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849
transcript_136179.known	chr8	-	2247	5	FSM	ENSG00000164924.18	ENST00000480304.5	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	3538	junction_4	469.620791170919	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGCCTGGGCAAAAGAGC	-6	True	NA	NA	False	NA	NA	NA	100951969	100922437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951928
transcript_136180.known	chr8	-	732	6	FSM	ENSG00000120963.12	ENST00000521272.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	717.081139063077	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCAGCAAAAATAAAGGG	-34	True	NA	NA	False	NA	NA	NA	101205682	101199159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101204649_101204694_101205434
transcript_136182.known	chr8	-	959	5	FSM	ENSG00000120963.12	ENST00000519882.5	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	716.959683315596	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACAGGATAAATGGTT	505	False	NA	-30	True	AATAAA	-19	NA	101205732	101198938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101205434
transcript_136187.known	chr8	-	2672	4	FSM	ENSG00000120963.12	ENST00000311212.9	2672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1474	junction_2	42.7733042393916	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTAGTCTAATTTCTT	-25	True	NA	NA	False	ATTAAA	-18	NA	101205673	101197051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101205434
transcript_136188.known	chr8	-	604	4	FSM	ENSG00000120963.12	ENST00000517844.5	604	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	719.203417369214	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGATAAATGGTTTTAGAA	2	True	NA	-24	True	AATAAA	-25	NA	101204701	101198932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101204649
transcript_136189.nic	chr8	+	1558	6	ISM	ENSG00000083307.12	ENST00000646743.1	5232	16	-216	95782	-216	29874	5prime_fragment	FALSE	canonical	3	30	junction_3	1.62480768092719	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCAGAGAGTTGGGGC	NA	False	NA	NA	False	AATAAA	-27	NA	101492222	101573944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_101492790_101543240_101543437_101552714_101552783_101558418_101558813_101570338_101570395_101573667
transcript_13619.known	chr1	+	1381	10	FSM	ENSG00000203705.11	ENST00000532324.5	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	108.373268992399	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAACCTCCACTTCCCA	NA	False	NA	NA	False	NA	NA	NA	212791827	212815597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812226_212812329_212815012
transcript_136191.known	chr8	+	1178	2	FSM	ENSG00000083307.12	ENST00000472106.2	1178	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACAACACATGGGAATTA	2	True	NA	NA	False	NA	NA	NA	101492441	101544070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_101492790_101543240
transcript_136192.nnic	chr8	+	687	2	NNC	ENSG00000083307.12	novel	1178	2	NA	NA	-32	12198	intron_retention	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGGAGGCTAAAAATA	NA	False	NA	NA	False	NA	NA	NA	101492406	101504987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_101492790_101504683
transcript_136193.known	chr8	+	5232	16	FSM	ENSG00000083307.12	ENST00000646743.1	5232	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	5.25948877955094	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTCTGGTGCTTTC	-1	True	NA	NA	False	AATAAA	-23	NA	101492438	101669726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_101492790_101543240_101543437_101552714_101552783_101558418_101558813_101570338_101570395_101573667_101573825_101577407_101577520_101599056_101599152_101619538_101619698_101631636_101631725_101632225_101632366_101636896_101636929_101644130_101644226_101649413_101649500_101664453_101664519_101666588
transcript_136194.known	chr8	-	425	3	FSM	ENSG00000104490.18	ENST00000517639.5	425	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGCAGCTGCCAGAGTC	4	True	NA	NA	False	NA	NA	NA	102124261	101915511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101915859_102020236_102020290_102124236
transcript_136195.known	chr8	-	469	2	FSM	ENSG00000104490.18	ENST00000524101.1	469	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTATGCAGGTTTACAA	65	False	NA	NA	False	CATAAA	-2	NA	101790934	101788633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101789030_101790861
transcript_136200.known	chr8	-	1613	9	FSM	ENSG00000048392.13	ENST00000522368.5	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	147.874735840846	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGGATGCAAAAATAAA	-1	True	NA	NA	False	TTTAAA	-44	NA	102238775	102207744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238558
transcript_136201.known	chr8	-	4774	9	FSM	ENSG00000048392.13	ENST00000251810.8	4774	9	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	40.7001228499374	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGTCTGCAGATAAA	-20	True	NA	-2	True	AATAAA	-18	NA	102238961	102204501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_13621.known	chr1	+	2527	10	FSM	ENSG00000203705.11	ENST00000366974.9	2527	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	73.7443029814658	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTTCTTTTCCCTA	0	True	NA	NA	False	ATTAAA	-26	NA	212791893	212816830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_136213.known	chr8	-	900	8	FSM	ENSG00000048392.13	ENST00000395912.6	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	159.675947353586	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTCGTTTTAAAAC	914	False	NA	NA	False	NA	NA	NA	102238874	102208132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102238826
transcript_136215.known	chr8	+	2376	3	FSM	ENSG00000246263.4	ENST00000520820.3	2384	3	8	0	8	0	multi-exon	FALSE	canonical	2	8	junction_2	3.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGCAATAAAAGTGGTTTT	-18	True	NA	NA	False	NA	NA	NA	102239393	102253750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102239701_102244004_102244122_102251798
transcript_136217.nnic	chr8	+	808	3	NNC	ENSG00000246263.4	novel	2384	3	NA	NA	63	-2747	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCAATCACAGTGCCT	37	False	NA	NA	False	ATTAAA	-17	NA	102239448	102250549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102239701_102244004_102244126_102250114
transcript_136218.known	chr8	+	592	2	FSM	ENSG00000253633.2	ENST00000523572.1	592	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTAAGCACATATTTATA	NA	False	NA	NA	False	TATAAA	-45	NA	102528754	102529801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102528856_102529310
transcript_136219.nnic	chr8	+	914	2	NNC	ENSG00000253633.2	novel	740	4	NA	NA	1300	395	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAAAATGTGTCAGG	8066	False	NA	NA	False	AATAAA	-21	NA	102537179	102539063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102537414_102538383
transcript_136220.known	chr8	-	3659	4	FSM	ENSG00000155090.15	ENST00000395884.3	3659	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	48.1456124688429	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGAATGGTCATTGCA	1554	False	NA	-7	True	AATAAA	-14	NA	102654375	102648785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102653469
transcript_136221.known	chr8	-	2915	4	FSM	ENSG00000155090.15	ENST00000285407.11	2915	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	4.49691252107735	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATGGTCATTGCATT	-6	True	NA	-5	True	AATAAA	-16	NA	102655725	102648783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102655565
transcript_136224.nnic	chr8	+	394	2	FSM	ENSG00000283959.2	ENST00000689431.1	390	2	-4	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGAAATTTATTTCTCA	-20	True	NA	NA	False	AATAAA	-26	NA	102656482	102666410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102656669_102666202
transcript_136225.nic	chr8	+	512	2	FSM	ENSG00000283959.2	ENST00000687500.1	763	2	242	9	-4	0	multi-exon	FALSE	canonical	2	6	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGAAATTTATTTCTCA	-20	True	NA	NA	False	AATAAA	-26	NA	102656482	102666410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102656787_102666202
transcript_136238.nnic	chr8	+	895	5	NNC	ENSG00000253320.7	novel	499	3	NA	NA	-245	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.55862138431185	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102929936	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930115_102937623_102937758_102941538_102941699_102941920_102942054_102977586
transcript_13624.known	chr1	+	2321	10	FSM	ENSG00000203705.11	ENST00000366973.8	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_8	76.4038975154773	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGATTTTATGAAAT	-10	True	NA	-1	True	AATAAA	-10	NA	212791883	212816617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812250_212812329_212815012
transcript_136241.nnic	chr8	+	934	5	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-239	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	14.9059551857638	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102929942	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930115_102930313_102930519_102937623_102937758_102941920_102942054_102977586
transcript_136244.nnic	chr8	+	1109	5	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.2805141726785	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930126	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102937623_102937758_102941538_102941699_102941920_102942054_102977586
transcript_136247.nnic	chr8	+	1014	5	NIC	ENSG00000253320.7	novel	756	4	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	12.5499003980111	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930138	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_102930519_102937623_102937758_102941920_102942054_102967596_102967674_102977586
transcript_136260.known	chr8	+	756	4	FSM	ENSG00000253320.7	ENST00000517996.5	756	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.3527000944073	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAAAGTATATGAAATC	NA	False	NA	NA	False	NA	NA	NA	102930181	102977738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102930519_102937623_102937758_102941920_102942054_102977586
transcript_136264.nnic	chr8	+	929	4	NNC	ENSG00000253320.7	novel	499	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	10.1434160364686	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930172	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102941538_102941699_102941920_102942054_102977586
transcript_136276.nnic	chr8	+	943	3	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-191	1225	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	9	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTGCCTCTTGTCAGT	NA	False	NA	NA	False	AATACA	-21	NA	102929990	102938943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102937623_102937758_102938662
transcript_136277.nnic	chr8	+	775	3	NIC	ENSG00000253320.7	novel	756	4	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930167	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_102930519_102937623_102937758_102977586
transcript_136281.nnic	chr8	+	803	3	NIC	ENSG00000253320.7	novel	756	4	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930138	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_102930519_102941920_102942054_102977586
transcript_136284.known	chr8	+	504	2	FSM	ENSG00000253320.7	ENST00000524007.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCGACCTTCCTGTG	-4	True	NA	NA	False	AATAAA	-18	NA	102864336	102865319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102864624_102865102
transcript_136286.nnic	chr8	+	997	2	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-192	-6509	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGATCCTATTGGTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	102929989	102931209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102930741
transcript_136288.nnic	chr8	+	790	2	NIC	ENSG00000253320.7	novel	756	4	NA	NA	-163	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102930018	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_102930519_102977586
transcript_136289.nnic	chr8	+	551	2	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-35	-6505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTATTGGTTTTGATTC	NA	False	NA	NA	False	AATAAA	-21	NA	102930146	102931213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102931034
transcript_136290.nnic	chr8	+	644	2	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-22	1229	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGACT	NA	False	NA	NA	False	AATACA	-25	NA	102930159	102938947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102938662
transcript_136291.known	chr8	+	499	3	FSM	ENSG00000253320.7	ENST00000519648.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102941622	102977876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102941699_102941920_102942054_102977586
transcript_136292.known	chr8	-	4196	12	FSM	ENSG00000155096.15	ENST00000337198.10	4196	12	0	0	0	0	multi-exon	FALSE	canonical	2	1104	junction_10	252.398347102026	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTGTATTAACAAT	0	True	NA	-5	True	AATAGA	-20	NA	102864163	102826307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
transcript_136293.known	chr8	-	3802	12	FSM	ENSG00000155096.15	ENST00000682969.1	3802	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	683.514749821202	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGATTTCTATATAGTAA	8237	False	NA	38	True	TATAAA	-4	NA	102864192	102826439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102828590_102829455_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843730_102858012_102858151_102863806
transcript_136294.known	chr8	-	2857	13	FSM	ENSG00000155096.15	ENST00000347770.8	2857	13	0	0	0	0	multi-exon	FALSE	canonical	2	587	junction_10	453.562258374991	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTCAGATTCATTA	8236	False	NA	-4	True	AGTAAA	-17	NA	102864193	102827822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849998_102850145_102858012_102858151_102863806
transcript_136295.known	chr8	+	5612	13	FSM	ENSG00000155097.12	ENST00000395862.7	5612	13	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	126.067524895721	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	6	True	NA	14	True	AATAAA	-16	NA	103021062	103073051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103021183_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_136299.known	chr8	+	5635	13	FSM	ENSG00000155097.12	ENST00000518738.2	5635	13	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_10	28.0449787543748	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	-18	True	NA	14	True	AATAAA	-16	NA	103021082	103073051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103021226_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_13630.known	chr1	+	794	9	FSM	ENSG00000203705.11	ENST00000526997.5	794	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	119.443239658007	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATCTGAACTGAAG	12	True	NA	-82	True	AATAGA	-10	NA	212791905	212815225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212812250_212812329_212815012
transcript_136300.known	chr8	-	496	2	FSM	ENSG00000236939.3	ENST00000436771.2	666	2	170	0	170	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACATGTCCCCGTCTCTG	-3	True	NA	NA	False	AATAAA	-20	NA	103141342	103132962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103133370_103141253
transcript_136301.known	chr8	-	421	2	FSM	ENSG00000236939.3	ENST00000521246.2	469	2	45	3	37	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTACATGTCCCCGTCT	11	False	NA	NA	False	AATAAA	-17	NA	103141475	103132965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103133370_103141458
transcript_136303.known	chr8	+	3728	7	FSM	ENSG00000164930.12	ENST00000358755.5	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	4.7169905660283	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	27	True	NA	18	True	AATAAA	-19	NA	103298897	103332866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_136305.known	chr8	+	3646	6	FSM	ENSG00000164930.12	ENST00000522484.5	3646	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	27.2983515985856	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	20	False	NA	18	True	AATAAA	-19	NA	103298830	103332866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103329654_103330066_103331340
transcript_136309.known	chr8	+	1240	4	FSM	ENSG00000164932.13	ENST00000330295.10	1240	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	2.35702260395516	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAATATCTTTAAATTAA	-25	True	NA	NA	False	AATAAA	-16	NA	103371537	103382989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103371807_103375737_103375960_103378026_103378244_103382457
transcript_136310.known	chr8	+	1198	4	FSM	ENSG00000164932.13	ENST00000520337.1	1198	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.6694913225759	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTTAATATCTTTAAATTAA	32	False	NA	NA	False	AATAAA	-16	NA	103372432	103382989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103372660_103375737_103375960_103378026_103378244_103382457
transcript_136317.known	chr8	-	2891	7	FSM	ENSG00000164933.12	ENST00000297578.9	2891	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	12.5255294853706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTTGTGTGATAGATAA	28	True	NA	-1	True	AATAAA	-28	NA	103415107	103398637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103404775_103404862_103407633_103407785_103414783
transcript_136318.known	chr8	-	1347	6	FSM	ENSG00000164933.12	ENST00000523866.1	1347	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	48.9963263929042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGCTTTAAAATTAACC	1	True	NA	NA	False	NA	NA	NA	103415069	103400057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103407633_103407785_103414783
transcript_13632.known	chr1	+	1073	9	FSM	ENSG00000203705.11	ENST00000526641.5	1073	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	123.693610889973	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTTATATAGAACCACC	-24	True	NA	108	True	NA	NA	NA	212791869	212815415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_136320.known	chr8	+	837	5	FSM	ENSG00000164934.14	ENST00000519682.5	837	5	0	0	0	0	multi-exon	FALSE	canonical	1	730	junction_2	520.08959564675	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTTTAGTCCCAGATAC	10	True	NA	NA	False	NA	NA	NA	103415411	103427430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096
transcript_136327.known	chr8	+	1062	6	FSM	ENSG00000176406.23	ENST00000523362.5	1062	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.91291198206288	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCAACCTTGGCCCCTCT	0	True	NA	NA	False	NA	NA	NA	104223363	104251736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_104223794_104244915_104245058_104248700_104248814_104249486_104249589_104251023_104251164_104251601
transcript_13633.known	chr1	+	2206	9	FSM	ENSG00000203705.11	ENST00000525574.5	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	128.414368354947	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATGAAATGATCTTCAA	32	True	NA	8	True	AATAAA	-19	NA	212791925	212816626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_136331.nic	chr8	+	1862	5	NIC	ENSG00000176406.23	novel	7050	26	NA	NA	-219	-32644	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	4.81534007106456	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CGGGAAAAAATGGAAACAAT	-1	True	NA	NA	False	AAGAAA	-8	NA	103500476	103886009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_103501063_103697085_103697297_103766226_103766538_103809279_103809322_103885297
transcript_136333.nic	chr8	+	900	5	ISM	ENSG00000176406.23	ENST00000523362.5	1062	6	-66	666	-37	0	5prime_fragment	FALSE	canonical	2	6	junction_1	9.25675429078681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAACAAAAGTGGC	118	False	NA	NA	False	NA	NA	NA	104223297	104251070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_104223794_104244915_104245058_104248700_104248814_104249486_104249589_104251023
transcript_136334.nic	chr8	+	1107	4	ISM	ENSG00000176406.23	ENST00000504942.6	4228	24	-220	366512	-168	-33306	5prime_fragment	FALSE	canonical	3	19	junction_3	5.24933858267454	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAAGAGAGGAATAT	50	False	NA	NA	False	AATAGA	-14	NA	103500527	103885347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_103501063_103697085_103697297_103766226_103766538_103885297
transcript_136339.nic	chr8	+	1009	2	ISM	ENSG00000176406.23	ENST00000632716.1	3500	20	-223	317056	-168	-70942	5prime_fragment	FALSE	canonical	3	21	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAACCCACAAAAAT	50	False	NA	NA	False	NA	NA	NA	103500527	103697559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_103501063_103697085
transcript_136340.known	chr8	-	291	1	FSM	ENSG00000255105.1	ENST00000534173.1	291	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGACCAAATAAGGATG	163	False	NA	NA	False	NA	NA	NA	103559389	103559098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103559100_103559400
transcript_136341.known	chr8	+	749	1	FSM	ENSG00000239344.1	ENST00000481577.1	749	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTTTGAATAACAAATC	41	False	NA	NA	False	NA	NA	NA	103768280	103769029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103768300_103769000
transcript_136344.known	chr8	-	4092	6	FSM	ENSG00000147650.12	ENST00000424843.6	4092	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	21.7752152687407	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCTTTATTTGTTGAA	-20	True	NA	0	True	ATTAAA	-41	NA	104589024	104489230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_104491540_104495076_104495210_104496971_104498077_104499316_104499520_104508938_104509075_104588818
transcript_136346.known	chr8	+	2956	16	FSM	ENSG00000164830.19	ENST00000442977.6	2956	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.5872504039369	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGTTAGAATTTGGGC	-26	True	NA	85	True	NA	NA	NA	106447923	106751173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106448049_106518942_106519140_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_136348.known	chr8	+	1944	7	FSM	ENSG00000164830.19	ENST00000297447.10	1944	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	39.8640049278656	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAAGATAGAATA	0	True	NA	NA	False	NA	NA	NA	106726106	106752016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106726310_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_136349.known	chr8	+	2621	6	FSM	ENSG00000164830.19	ENST00000449762.6	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	37.3127324113365	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAATACAAATGAGT	NA	False	NA	NA	False	AATAAA	-6	NA	106726011	106752679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106726310_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_136353.nnic	chr8	+	885	2	NNC	ENSG00000164830.19	novel	1148	2	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	86	False	NA	15	True	AATAAA	-17	NA	106270299	106272774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_106270368_106271957
transcript_136354.nnic	chr8	+	1010	2	NNC	ENSG00000164830.19	novel	1318	2	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCCTGTATTGTTTTG	86	False	NA	NA	False	AATAAA	-14	NA	106270299	106272899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_106270368_106271957
transcript_136355.known	chr8	+	1174	2	FSM	ENSG00000164830.19	ENST00000661818.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTATTGTTTTGTTT	77	False	NA	NA	False	AATAAA	-17	NA	106270290	106272902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106270368_106271805
transcript_136356.known	chr8	+	1148	2	FSM	ENSG00000164830.19	ENST00000658832.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	76	False	NA	15	True	AATAAA	-17	NA	106270289	106272774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106270368_106271704
transcript_136361.known	chr8	-	4230	9	FSM	ENSG00000154188.10	ENST00000517746.6	4230	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	4.32290411644765	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATTTTATTTTTAATAC	-2	True	NA	NA	False	AATAAA	-23	NA	107497918	107249481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321895_107322129_107336149_107336272_107346941_107347098_107497261
transcript_136363.known	chr8	-	4353	9	FSM	ENSG00000154188.10	ENST00000297450.7	4353	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	4.54835134966506	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGCAACTTCATTTT	NA	False	NA	NA	False	AATAAA	-12	NA	107498055	107249492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321898_107322129_107336149_107336272_107346941_107347098_107497261
transcript_136369.known	chr8	-	1732	14	FSM	ENSG00000104408.11	ENST00000518100.6	1732	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	1362.911224518	2653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-1	True	NA	-24	True	AATAAA	-18	NA	108248716	108201739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111_108242347_108248612
transcript_136371.known	chr8	-	1609	14	FSM	ENSG00000104408.11	ENST00000676642.1	1609	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	1594.511570334	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATATTACGTATAAATTT	-1	True	NA	0	True	AATAAA	-36	NA	108248716	108201793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235098_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
transcript_136374.known	chr8	-	1394	12	FSM	ENSG00000104408.11	ENST00000519030.6	1394	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	1128.63616958956	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	NA	False	NA	-29	True	AATAAA	-13	NA	108248733	108201744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108248612
transcript_136376.known	chr8	-	2467	11	FSM	ENSG00000104408.11	ENST00000678773.1	2467	11	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_10	1133.47238166618	2495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATTTACAAAAACAGGC	NA	False	NA	NA	False	NA	NA	NA	108248730	108200550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108248612
transcript_136378.known	chr8	-	1121	9	FSM	ENSG00000104408.11	ENST00000519627.2	1121	9	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	1195.44651046168	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-11	True	NA	-29	True	AATAAA	-13	NA	108248726	108201744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108248612
transcript_136381.known	chr8	-	3543	5	FSM	ENSG00000104408.11	ENST00000676548.1	3543	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2109.08368729171	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGTATACACATTTACA	NA	False	NA	NA	False	NA	NA	NA	108248730	108230513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108248612
transcript_136382.known	chr8	-	527	4	FSM	ENSG00000104408.11	ENST00000522352.6	527	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	1815.4186538892	2198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-5	True	NA	-27	True	AATAAA	-15	NA	108248720	108201742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108248612
transcript_136384.known	chr8	-	1501	13	FSM	ENSG00000104408.11	ENST00000676698.1	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1089.03827029479	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	NA	False	NA	-27	True	AATAAA	-15	NA	108248730	108201742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202989_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_136385.known	chr8	-	1158	10	FSM	ENSG00000104408.11	ENST00000521297.2	1158	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	1267.20611320074	2281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-4	True	NA	-27	True	AATAAA	-15	NA	108248719	108201742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_136386.known	chr8	-	1485	13	FSM	ENSG00000104408.11	ENST00000522445.6	1485	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	1096.95297681046	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	-3	True	NA	17	True	TATAAA	-40	NA	108248718	108201776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108248612
transcript_136387.known	chr8	-	1275	13	FSM	ENSG00000104408.11	ENST00000677272.1	1275	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	1098.02203479206	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAGAAAAGATGAAAAAAA	-4	True	NA	-84	True	NA	NA	NA	108248719	108201877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241885_108241914_108248612
transcript_136388.known	chr8	-	4050	6	FSM	ENSG00000104408.11	ENST00000677447.1	4050	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1639.94165749883	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGACATGTATTCTTC	NA	False	NA	0	True	ATTAAA	-19	NA	108248730	108230121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_136394.known	chr8	-	6283	2	FSM	ENSG00000164841.5	ENST00000297459.4	6283	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTTTGTCATTCTTCT	-7	True	NA	0	True	ATTAAA	-19	NA	108787594	108778973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108785138_108787475
transcript_1364.known	chr1	-	4989	8	FSM	ENSG00000162441.12	ENST00000377223.6	4989	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	22.9213384230075	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCCACGTTTTTCTT	-31	True	NA	0	True	AATAAA	-35	NA	9943391	9926292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_136400.known	chr8	-	2286	11	FSM	ENSG00000120526.12	ENST00000519607.5	2286	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	149.237696310282	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCGTTGATTAGTTG	-30	True	NA	-12	True	AATAAA	-16	NA	109334118	109242674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_109243302_109245321_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109313796_109313889_109322308_109322464_109333892
transcript_136401.known	chr8	-	3811	10	FSM	ENSG00000120526.12	ENST00000678094.1	3811	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	123.159336723702	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATAGTACCTTGTATT	-33	True	NA	-106	True	NA	NA	NA	109334121	109241020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_109243302_109245321_109245442_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_136403.known	chr8	-	3919	10	FSM	ENSG00000120526.12	ENST00000239690.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_3	30.6718997145395	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGAGTCATTAACAAT	1	True	NA	-4	True	AATAAA	-23	NA	109334087	109240918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_109243302_109245321_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_136408.known	chr8	-	2542	9	FSM	ENSG00000120526.12	ENST00000676569.1	2542	9	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	31.1648840844948	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTATAGGGGAATTCTA	-33	True	NA	NA	False	NA	NA	NA	109334121	109244349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_136423.known	chr8	+	541	4	FSM	ENSG00000120533.13	ENST00000522407.5	541	4	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_1	1336.11285285172	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTGGATTTTGAAAT	-7	True	NA	33	True	AATAAA	-22	NA	109334346	109343671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334475_109339319_109339391_109340488_109340564_109343404
transcript_136425.known	chr8	+	2150	4	FSM	ENSG00000120533.13	ENST00000517350.5	2150	4	0	0	0	0	multi-exon	FALSE	canonical	3	2739	junction_1	65.9966329107444	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTTCAGTAATGATG	27	True	NA	26	True	AATAAA	-22	NA	109334380	109343584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109336205_109339319_109339391_109340488_109340564_109343404
transcript_136426.known	chr8	+	546	5	FSM	ENSG00000120533.13	ENST00000339942.11	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1342.21707912692	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTTGGATTTTGAAA	-15	True	NA	32	True	AATAAA	-21	NA	109334338	109343670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334403_109336132_109336205_109339319_109339391_109340490_109340564_109343404
transcript_136427.known	chr8	+	567	5	FSM	ENSG00000120533.13	ENST00000522766.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	1186.13729706978	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	-30	True	NA	-14	True	NA	NA	NA	109334323	109343624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_136430.known	chr8	+	1467	7	FSM	ENSG00000147654.15	ENST00000395785.6	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	42.3975890299856	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTGTACATCATTA	-11	True	NA	NA	False	ATTAAA	-22	NA	109539710	109565160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109539920_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_136436.known	chr8	+	2186	7	FSM	ENSG00000147654.15	ENST00000620557.4	2186	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	87.1921568847922	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGAATTGGGCTCAAAG	5	True	NA	NA	False	AATAAA	-11	NA	109540625	109565988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109540726_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_13646.known	chr1	+	498	6	FSM	ENSG00000203705.11	ENST00000488246.6	498	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_4	22.547727158186	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTCTACATTTATTTT	30	True	NA	6	True	ATTAAA	-24	NA	212791923	212804498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319
transcript_136474.known	chr8	+	866	3	FSM	ENSG00000254339.6	ENST00000521523.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_2	493.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTTATCATGGAAGTAT	NA	False	NA	NA	False	NA	NA	NA	114282066	114295807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_114282295_114284218_114284515_114295465
transcript_136475.known	chr8	+	697	3	FSM	ENSG00000254339.6	ENST00000507929.3	1734	3	0	1037	0	-183	multi-exon	FALSE	canonical	3	736	junction_2	465.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAAGTTTGAATAGC	NA	False	NA	NA	False	NA	NA	NA	114282071	114295624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_114282295_114284218_114284534_114295465
transcript_136476.known	chr8	+	730	3	FSM	ENSG00000254339.6	ENST00000519248.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	699.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAAAAAGTCTTCTT	51	False	NA	NA	False	NA	NA	NA	114282135	114287996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_114282295_114284218_114284515_114287721
transcript_136478.nnic	chr8	-	700	4	Intergenic	novelGene_79	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTTTGATGAATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	114504557	114302883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr8_-_114303145_114304406_114304496_114394909_114394988_114504285
transcript_13648.known	chr1	+	492	5	FSM	ENSG00000203705.11	ENST00000530441.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	160.395604677934	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACATTTATTTTTCTCCA	NA	False	NA	12	True	ATTAAA	-30	NA	212791850	212804504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212802700_212802764_212804319
transcript_136480.known	chr8	-	1265	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	730.318156268212	4203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGATGTATTTTCTCT	-11	True	NA	-11	True	AATAAA	-33	NA	116755823	116644816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726161_116737712_116737716_116755665
transcript_136499.known	chr8	-	3961	8	FSM	ENSG00000147677.12	ENST00000521861.6	3961	8	0	0	0	0	multi-exon	FALSE	canonical	3	1614	junction_4	62.1334968319942	7497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATGTAATACACTGT	-11	True	NA	-2	True	AATAAA	-16	NA	116755823	116642129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
transcript_1365.known	chr1	-	945	8	FSM	ENSG00000162441.12	ENST00000377213.1	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	41.1398808447274	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATGCTCTTCAT	-47	False	NA	-21	True	CATAAA	-14	NA	9943407	9930252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
transcript_136501.known	chr8	-	3660	14	FSM	ENSG00000164754.16	ENST00000297338.7	3660	14	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_13	99.8070327531194	1605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTATTCATTAT	11	True	NA	-7	True	AATAAA	-20	NA	116874776	116845933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_116847692_116848945_116849030_116850617_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
transcript_136508.known	chr8	+	3672	3	FSM	ENSG00000147679.12	ENST00000309822.7	3672	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	20.5	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATCTCCTTGTACTTC	-10	True	NA	NA	False	ATTAAA	-17	NA	116766523	116774684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_116766792_116770191_116770367_116771455
transcript_136514.known	chr8	+	796	2	FSM	ENSG00000147679.12	ENST00000517820.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGCAGACTCTTAAT	38	False	NA	NA	False	CATAAA	-30	NA	116766571	116849463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_116766792_116848887
transcript_136518.known	chr8	+	2291	2	FSM	ENSG00000205002.4	ENST00000378279.4	2291	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCTGAGAATTATCTGG	0	True	NA	NA	False	AATAAA	-45	NA	116938206	116944487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_116938568_116942557
transcript_13652.nnic	chr1	-	779	3	Fusion	ENSG00000198468.10_ENSG00000185523.6	novel	506	3	NA	NA	-26	-56	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGTGTGTCTAAATTAT	NA	False	NA	NA	False	GATAAA	-45	NA	212858164	212830196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_212830262_212835872_212836188_212857765
transcript_136520.known	chr8	+	500	2	FSM	ENSG00000205002.4	ENST00000523536.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGACAGAGCTTGCAG	31	False	NA	NA	False	NA	NA	NA	116938545	116942922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_116938681_116942557
transcript_136522.known	chr8	+	985	4	FSM	ENSG00000164758.7	ENST00000297347.7	985	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_2	12.2836838484589	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGATTAATGGATTTAC	-16	True	NA	15	True	AATAAA	-21	NA	117520712	117540262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_117521054_117528650_117528810_117530722_117530828_117539882
transcript_136523.known	chr8	+	476	3	FSM	ENSG00000164758.7	ENST00000522839.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	117.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATATTTAAATTTCCTG	10	True	NA	NA	False	TATAAA	-26	NA	117520832	117539978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_117521054_117528650_117528810_117539882
transcript_136525.known	chr8	-	2006	11	FSM	ENSG00000182197.13	ENST00000684189.1	2006	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	53.7140577502761	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAATGATCAAAACTA	NA	False	NA	14	True	ATTAAA	-38	NA	118017235	117799413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_117799898_117804721_117804894_117807216_117807378_117812871_117812962_117818434_117818531_117819675_117819795_117822464_117822598_117830229_117830350_117835443_117835552_117837107_117837202_118016806
transcript_13653.known	chr1	-	2565	2	FSM	ENSG00000198468.10	ENST00000356684.8	2565	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTTTCTTTTTTTTAT	NA	False	NA	NA	False	CATAAA	-16	NA	212858125	212852104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212854310_212857765
transcript_136530.known	chr8	-	782	5	FSM	ENSG00000177570.15	ENST00000524796.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.55521678957215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAAATCTTGCTTTGCT	-6	True	NA	NA	False	AAAAAG	-28	NA	118621949	118197546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_118197733_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_136537.nic	chr8	-	800	5	NIC	ENSG00000177570.15	novel	780	5	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	7.07106781186548	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAAGGAAAAAGGGTGA	133	False	NA	NA	False	AATAAA	-15	NA	118621997	118375700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_118375857_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_13654.known	chr1	-	633	2	FSM	ENSG00000198468.10	ENST00000424044.2	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	8	True	NA	1	True	AATAAA	-40	NA	212858083	212856603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212856919_212857765
transcript_136543.known	chr8	-	8809	5	FSM	ENSG00000177570.15	ENST00000409003.5	8809	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.14808723176599	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTTGATTCTGATTTTC	29	True	NA	2	True	ATTAAA	-28	NA	118621914	118189454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_118197733_118379559_118379701_118439861_118439962_118580714_118580894_118621803
transcript_136544.known	chr8	+	1980	7	FSM	ENSG00000281641.3	ENST00000664584.1	1980	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.25830573921179	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGCAGACATTCAGGAAG	295	False	NA	NA	False	ATTAAA	-3	NA	118621405	118906083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_118621656_118668449_118668602_118724518_118724629_118725935_118726068_118764268_118764385_118903658_118903780_118904984
transcript_136547.known	chr8	-	2087	5	FSM	ENSG00000164761.9	ENST00000297350.9	2087	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1.80277563773199	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTTCTGTTGCTTTT	-1	True	NA	-4	True	ATTAAA	-20	NA	118951885	118923556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_118924763_118926493_118926719_118928737_118928930_118932930_118933301_118951791
transcript_136549.known	chr8	+	2826	4	FSM	ENSG00000147676.14	ENST00000614891.5	2826	4	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_2	207.949245944507	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTCATCTTTTAC	-4	True	NA	27	True	AATAAA	-16	NA	119208362	119245673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_119208605_119221586_119221758_119240164_119240321_119243416
transcript_13655.known	chr1	-	929	2	FSM	ENSG00000198468.10	ENST00000426161.7	942	2	13	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	NA	False	NA	1	True	AATAAA	-40	NA	212858125	212856603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212857173_212857765
transcript_136552.known	chr8	+	892	4	FSM	ENSG00000147676.14	ENST00000531508.1	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	776.346572092645	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTAATTTTATTATGAT	326	False	NA	-22	True	NA	NA	NA	119208867	119243648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_119209201_119221586_119221758_119240164_119240321_119243416
transcript_136561.nic	chr8	-	3128	25	NIC	ENSG00000136960.13	novel	3271	26	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_7	11.1522761752428	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTTTTATTTGGCTT	-10	True	NA	-11	True	AATAAA	-16	NA	119673398	119557086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582429_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119673251
transcript_136564.known	chr8	-	3086	25	FSM	ENSG00000136960.13	ENST00000075322.11	3086	25	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_24	14.1860161974938	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTTATTTGGCTTT	1	True	NA	-10	True	AATAAA	-17	NA	119638839	119557085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119638747
transcript_136567.known	chr8	-	5027	26	FSM	ENSG00000064313.13	ENST00000378164.7	5027	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	31.9263151647665	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCTTTGTAGCTT	-3	True	NA	-18	True	AATAAA	-17	NA	119832841	119730773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_136571.nic	chr8	-	2077	14	ISM	ENSG00000064313.13	ENST00000690144.1	5377	26	-9	57302	-1	6372	5prime_fragment	FALSE	canonical	0	0	junction_13	38.6432629981984	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCCAAAAGTAGAAGGTAG	NA	False	NA	-17	True	AAGAAA	-28	NA	119832864	119788353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_136577.known	chr8	-	2198	9	FSM	ENSG00000136982.6	ENST00000313655.5	2198	9	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_7	19.0394327646598	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTATATGATATATA	-4	True	NA	-40	True	AATAAA	-15	NA	119855894	119833975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119850381_119850517_119853046_119853216_119855613
transcript_136582.known	chr8	-	703	2	FSM	ENSG00000136982.6	ENST00000521795.1	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGTAGATTTTGCTGT	32	True	NA	NA	False	NA	NA	NA	119855858	119852757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_119853216_119855613
transcript_136583.known	chr8	+	2569	9	FSM	ENSG00000155792.10	ENST00000286234.6	2569	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	6.46988214730377	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCTTTTCATTAGGT	-1	True	NA	18	True	AATAAA	-20	NA	119873721	120050918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_119873969_119928399_119928579_119929814_119929939_119965231_119965411_120001524_120001711_120002976_120003112_120006804_120006876_120009028_120009134_120049575
transcript_136587.nic	chr8	+	799	3	ISM	ENSG00000155792.10	ENST00000286234.6	2569	9	-32	120763	-27	-119436	5prime_fragment	FALSE	canonical	3	26	junction_1	2.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTATTTAAGTTGAT	5	True	NA	NA	False	AATAAA	-19	NA	119873689	119930155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_119873969_119928399_119928579_119929814
transcript_136591.nic	chr8	+	1964	12	ISM	ENSG00000187955.13	ENST00000432943.6	3828	27	-141	67842	-99	-6469	5prime_fragment	FALSE	canonical	3	53	junction_5	12.1430863232765	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTATAATCCCACCACT	NA	False	NA	NA	False	AAGAAA	-6	NA	120125002	120210023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755
transcript_136593.nic	chr8	+	845	5	ISM	ENSG00000187955.13	ENST00000432943.6	3828	27	-240	109683	-198	-48310	5prime_fragment	FALSE	canonical	3	69	junction_4	8.84590300647707	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCAAAGCCCAGAGTCA	NA	False	NA	NA	False	AAAAAG	-4	NA	120124903	120168182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160
transcript_136595.nic	chr8	+	653	4	ISM	ENSG00000187955.13	ENST00000432943.6	3828	27	-70	115296	-28	-53923	5prime_fragment	FALSE	canonical	3	84	junction_3	3.29983164553722	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTATTTACAGTTCTCA	NA	False	NA	6	True	AATAAA	-38	NA	120125073	120162569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425
transcript_136596.known	chr8	+	8009	48	FSM	ENSG00000187955.13	ENST00000297848.8	8009	48	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_5	15.5711832368967	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTCTTCAGAATTCTC	-2	True	NA	NA	False	AATAAA	-18	NA	120125101	120373573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120371151
transcript_136598.known	chr8	+	3067	22	FSM	ENSG00000172167.8	ENST00000305949.6	3067	22	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_12	15.613239338151	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGATTTCATGTCTT	1	True	NA	NA	False	AATAAA	-19	NA	120445418	120523636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170_120451323_120453846_120453906_120455434_120455580_120456552_120456671_120459214_120459350_120461160_120461256_120463691_120463762_120470819_120470938_120488158_120488333_120490462_120490571_120497392_120497555_120502491_120502610_120506705_120506862_120509933_120510030_120515924_120516192_120517850_120518101_120518703_120518818_120522653_120522720_120523297
transcript_13660.known	chr1	+	5919	10	FSM	ENSG00000162769.13	ENST00000366971.9	5919	10	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	61.1769342477262	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGACTTTTTGAAA	-6	True	NA	19	True	AATAAA	-19	NA	212858274	212899363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212859191_212863724_212863870_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_136619.known	chr8	+	1981	4	FSM	ENSG00000172167.8	ENST00000522308.1	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	7.1336448530109	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	4	True	NA	NA	False	NA	NA	NA	120445421	120452829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170
transcript_136623.known	chr8	+	1141	1	FSM	ENSG00000272502.1	ENST00000605955.1	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCATTGATGTGTATCAT	777	False	NA	21	True	AATAAA	-15	NA	120812218	120813359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_120812200_120813400
transcript_136625.known	chr8	-	329	1	FSM	ENSG00000239872.1	ENST00000469425.1	329	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGTGAAAAGTCAACAAG	6112	False	NA	NA	False	NA	NA	NA	121380465	121380136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_121380100_121380500
transcript_136627.nic	chr8	+	1574	4	ISM	ENSG00000248690.8	ENST00000648171.1	1265	9	1890	258974	-120	0	internal_fragment	FALSE	canonical	0	0	junction_3	1.69967317119759	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTACTCTGATAACACA	171	False	NA	-11	True	ATTAAA	-7	NA	121641199	121645299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_121641447_121642583_121642732_121643372_121643518_121644265
transcript_136628.known	chr8	+	1462	4	FSM	ENSG00000248690.8	ENST00000656304.1	1462	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTACTCTGATAACACA	291	False	NA	-11	True	ATTAAA	-7	NA	121641319	121645299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_121641455_121642583_121642732_121643372_121643518_121644265
transcript_136630.known	chr8	-	4240	4	FSM	ENSG00000170961.7	ENST00000303924.5	4240	4	0	0	0	0	multi-exon	FALSE	canonical	3	2489	junction_1	243.028576280422	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTTTTTTTCTAAG	-2	True	NA	-36	True	AATAAA	-16	NA	121641440	121612115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_121615039_121617104_121617207_121628713_121629341_121640852
transcript_136636.nic	chr8	-	1408	2	ISM	ENSG00000170961.7	ENST00000303924.5	4240	4	-601	17006	-601	-17006	5prime_fragment	FALSE	canonical	3	3083	junction_1	0	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTAGAAACCCCCATAAA	NA	False	NA	NA	False	AATGAA	-5	NA	121642041	121629121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_121629341_121640852
transcript_136645.nnic	chr8	-	452	4	NNC	ENSG00000253819.2	novel	606	4	NA	NA	99781	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.2659863237109	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCATGATATTCTGT	NA	False	NA	-1	True	AATAAA	-20	NA	122571609	122485194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_122485329_122487386_122487467_122567576_122567690_122571484
transcript_136651.known	chr8	-	860	1	FSM	ENSG00000272384.1	ENST00000607710.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGGCCTGCACCTGTT	2401	False	NA	-13	True	ATTAAA	-22	NA	122780830	122779970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_122780000_122780800
transcript_136656.known	chr8	+	4361	4	FSM	ENSG00000178764.8	ENST00000314393.6	4361	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	19.8662192343351	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCCTCTACTTCGCCT	3	True	NA	25	True	AATAAA	-24	NA	122781654	122974510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_122781947_122863476_122863540_122951291_122954029_122973241
transcript_136660.known	chr8	+	3478	22	FSM	ENSG00000156787.17	ENST00000287380.6	3478	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_19	52.6221718529513	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	-12	True	NA	14	True	AATAAA	-22	NA	123072706	123152153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
transcript_136669.nic	chr8	+	1308	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-11	1361	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAATGTACAGAATAGCA	-23	True	NA	NA	False	TTTAAA	-36	NA	123072695	123102448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_136671.nic	chr8	+	2293	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-67	-849	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATCTGCTCTTACTGA	102	False	NA	4	True	AATAAA	-15	NA	123072614	123103352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_136672.nic	chr8	+	3142	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_7	43.3250646218767	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTCATGGTGTAAACAAG	102	False	NA	9	True	AATAAA	-33	NA	123072614	123104201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_136674.known	chr8	+	1159	7	FSM	ENSG00000156787.17	ENST00000518099.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_4	28.4351113160395	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCTAACTTACCTGGA	4	True	NA	NA	False	AATAAA	-13	NA	123072722	123101087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806
transcript_136679.nnic	chr8	+	428	3	NNC	ENSG00000156787.17	novel	1159	7	NA	NA	-10	-6789	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_2	110	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGTAGTTTCCTTTTT	-47	True	NA	4	True	ATTAAA	-19	NA	123072671	123077480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_123072847_123077110_123077258_123077374
transcript_136681.known	chr8	-	1994	8	FSM	ENSG00000136986.10	ENST00000405944.7	1994	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	122.542620657268	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTTTCACACAGTTAT	230	False	NA	-1	True	AATAAA	-15	NA	123042122	123014148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123015586_123019194_123019246_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_136682.known	chr8	-	3213	8	FSM	ENSG00000136986.10	ENST00000259512.9	3213	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	24.5581359393649	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTGAGGAGTCATAT	-18	True	NA	NA	False	AATGAA	-17	NA	123042302	123013169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_136692.known	chr8	-	918	4	FSM	ENSG00000136986.10	ENST00000419562.6	918	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	150.851656345637	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGGTTTTAGCGGGT	-18	True	NA	36	True	NA	NA	NA	123042302	123015164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123041969
transcript_13670.nnic	chr1	+	1908	4	NNC	ENSG00000282718.1	novel	554	3	NA	NA	-294	2811	intron_retention	FALSE	canonical	3	25	junction_3	2.44948974278318	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCTTTCTCATGTTTA	6014	False	NA	25	True	AATAAA	-19	NA	212916492	212920388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212917201_212917359_212917705_212918335_212918387_212919584
transcript_136703.known	chr8	-	5200	4	FSM	ENSG00000165156.15	ENST00000297857.3	5200	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.9267594221045	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTTTTTTCATTTTA	1033	False	NA	NA	False	AATAAA	-25	NA	123274487	123248450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123250321_123253321_123256172_123267272_123267387_123274121
transcript_136707.known	chr8	-	1014	1	FSM	ENSG00000165156.15	ENST00000602651.1	1014	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTGGCATGTTCCTTAA	9643	False	NA	0	True	AATAAA	-19	NA	123253442	123252428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123252400_123253400
transcript_136708.known	chr8	-	1310	6	FSM	ENSG00000189376.12	ENST00000276704.6	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	13.6879509058149	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTGCATTCAGTTTA	-17	True	NA	-19	True	TATAAA	-43	NA	123241377	123219966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123220298_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_136709.known	chr8	-	948	5	FSM	ENSG00000189376.12	ENST00000521310.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	14.2894191624432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTATCCCTCGGGTTTA	16	True	NA	NA	False	NA	NA	NA	123241344	123226497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_13671.nnic	chr1	+	1737	3	NNC	ENSG00000282718.1	novel	554	3	NA	NA	212	1948	intron_retention	FALSE	canonical	3	28	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAAGAGTGTGCCTGTGC	6520	False	NA	NA	False	AATAAA	-34	NA	212916998	212919525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212917201_212917359_212917705_212918335
transcript_136710.known	chr8	-	5547	28	FSM	ENSG00000156802.13	ENST00000287394.10	5547	28	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_18	20.3469899493758	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCTATTTCTTAAGT	-5	True	NA	0	True	AATAAA	-26	NA	123396447	123319849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123321176_123322937_123323067_123325892_123326027_123328189_123328580_123333877_123334022_123334199_123334323_123336372_123336533_123337624_123337822_123339310_123339447_123344883_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_136715.nic	chr8	-	1003	6	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-298	26456	-252	1693	5prime_fragment	FALSE	canonical	3	182	junction_4	13.614697940094	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGGAAAACAGAAAGATATT	NA	False	NA	-11	True	TTTAAA	-32	NA	123396699	123370968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_136717.nic	chr8	-	981	5	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-298	26723	-252	1426	5prime_fragment	FALSE	canonical	3	182	junction_3	14.4048602908879	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATATTCTTCCATTA	NA	False	NA	NA	False	AATGAA	-10	NA	123396699	123371235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_136718.nic	chr8	-	485	3	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-96	28149	-50	0	5prime_fragment	FALSE	canonical	3	182	junction_1	3.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGCACAG	NA	False	NA	NA	False	AATATA	-27	NA	123396497	123372661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_123372687_123380528_123380678_123396186
transcript_13672.nic	chr1	+	793	2	NIC	ENSG00000282718.1	novel	554	3	NA	NA	-213	-52	intron_retention	FALSE	canonical	3	28	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTTTTTTCTTTTTTT	6095	False	NA	NA	False	TATAAA	-22	NA	212916573	212917525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_212917201_212917359
transcript_136727.known	chr8	+	853	8	FSM	ENSG00000156795.8	ENST00000523551.1	853	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	58.1103805402323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCATGTTGGTGAAGCTA	1	True	NA	NA	False	NA	NA	NA	123416802	123467230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305_123441350_123448046_123448225_123467078
transcript_136735.known	chr8	+	909	7	FSM	ENSG00000156795.8	ENST00000517609.5	909	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	56.3579827728266	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTACTTGCTAAGATATT	-10	True	NA	46	True	CATAAA	-40	NA	123416791	123441623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_136737.known	chr8	+	3502	7	FSM	ENSG00000156795.8	ENST00000650311.1	3502	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	52.3792261620323	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGGTCCCCATGATGG	-28	True	NA	NA	False	TATAAA	-12	NA	123416773	123470028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305_123441350_123467078
transcript_136738.known	chr8	+	949	7	FSM	ENSG00000156795.8	ENST00000519199.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	54.230219127961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGTCAAATTGAAACTT	-1	True	NA	19	True	TATAAA	-26	NA	123416800	123441596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_13674.nnic	chr1	+	4389	9	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	90	junction_2	297.413012492729	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	1	True	NA	23	True	AATAAA	-19	NA	212950540	212991585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_136743.known	chr8	+	1491	6	FSM	ENSG00000156795.8	ENST00000523984.5	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	35.1965907439911	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	0	True	NA	NA	False	NA	NA	NA	123416725	123442240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_136748.known	chr8	+	1519	6	FSM	ENSG00000156795.8	ENST00000287387.7	1519	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	18.1835090122891	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	-28	True	NA	NA	False	NA	NA	NA	123416773	123442240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_13676.nnic	chr1	+	952	7	NNC	ENSG00000143494.16	novel	4473	8	NA	NA	0	-1746	at_least_one_novel_splicesite	FALSE	canonical	3	90	junction_2	364.849740760951	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTCATCCCTTTAT	1	True	NA	12	True	AATAAA	-22	NA	212950540	212971172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212971037
transcript_136762.known	chr8	+	341	3	FSM	ENSG00000156795.8	ENST00000522194.5	341	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	24.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATTATGACTTGTAACCC	-31	True	NA	NA	False	AATACA	-12	NA	123416770	123430061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416933_123427923_123428024_123429982
transcript_136765.known	chr8	-	735	3	FSM	ENSG00000156804.7	ENST00000524000.5	735	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAATAATTCTATTTCAG	NA	False	NA	13	True	AATAAA	-35	NA	123506625	123503105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123503463_123504603_123504748_123506391
transcript_136766.known	chr8	+	5529	24	FSM	ENSG00000176853.16	ENST00000334705.12	5529	24	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_14	12.5936942243133	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTTAATTTTCTGAAAG	-40	True	NA	33	True	AATAAA	-30	NA	123768438	123815452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123768775_123774079_123774165_123775146_123775299_123777264_123777323_123778024_123778093_123778658_123778773_123779984_123780076_123780479_123780543_123784469_123784577_123785080_123785120_123785628_123785742_123786494_123786611_123787260_123787374_123787663_123787751_123789612_123789746_123798089_123798239_123799519_123799655_123799771_123799886_123805266_123805340_123806079_123806230_123808271_123808377_123808892_123809017_123810281_123810352_123812518
transcript_136767.known	chr8	-	9038	7	FSM	ENSG00000164983.8	ENST00000297632.8	9038	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	3.67045259092421	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGGTTATTTTACTTT	-3	True	NA	-9	True	AATAAA	-20	NA	124372701	124306188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124314062_124320085_124320192_124322104_124322148_124323320_124323376_124327353_124327422_124330747_124330793_124371853
transcript_136768.nnic	chr8	+	848	2	NIC	ENSG00000183665.5	novel	822	3	NA	NA	-7	113	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATGGAATCAGAATTAAG	-7	True	NA	13	True	AATAAA	-14	NA	124450812	124452854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_124451258_124452451
transcript_136769.known	chr8	+	2207	1	FSM	ENSG00000183665.5	ENST00000328599.4	2207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTTAAGAATCACCAGT	0	True	NA	NA	False	TATAAA	-22	NA	124450819	124453026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124450800_124453000
transcript_13677.known	chr1	+	1206	7	FSM	ENSG00000143494.16	ENST00000366967.6	1206	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	238.719966115577	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGAACTTTTG	23	False	NA	NA	False	AGTAAA	-10	NA	212950666	212988924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212950741_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_136770.known	chr8	-	359	3	FSM	ENSG00000245149.5	ENST00000519861.2	569	3	210	0	164	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCTTCAGTCTTTATT	196	False	NA	NA	False	AATAAA	-32	NA	124474354	124472807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124472988_124474084_124474195_124474285
transcript_136771.known	chr8	-	1767	1	FSM	ENSG00000245149.5	ENST00000530778.1	1767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGCTTCAGTCTTTA	-26	True	NA	NA	False	AATAAA	-30	NA	124474576	124472809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124472800_124474600
transcript_136772.known	chr8	-	355	4	FSM	ENSG00000170873.19	ENST00000524243.5	355	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.739839372653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATATGTTTGGTATGG	949	False	NA	NA	False	AATAAA	-15	NA	124727998	124698038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124698143_124699525_124699600_124704129_124704192_124727883
transcript_136773.known	chr8	-	4994	14	FSM	ENSG00000170873.19	ENST00000518547.6	4994	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	8.58304369400823	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTTCAAGTCTTG	-5	True	NA	-12	True	AATAAA	-20	NA	124728473	124550783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124553693_124555741_124555905_124556231_124556406_124557680_124557876_124562781_124562993_124565661_124565760_124567070_124567179_124568378_124568537_124585086_124585162_124589619_124589712_124591150_124591236_124699525_124699600_124704129_124704192_124727883
transcript_136795.known	chr8	-	889	10	FSM	ENSG00000147687.19	ENST00000519548.5	889	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	132.215405986772	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGTTGTCTAAAGAAAT	-5	True	NA	NA	False	AATAAA	-10	NA	124539076	124488512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124539024
transcript_136806.known	chr8	+	636	4	FSM	ENSG00000147684.10	ENST00000517367.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1413.33246855319	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATGACTGACGTTC	3	True	NA	15	True	AATAAA	-17	NA	124539143	124549978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124539288_124543119_124543280_124546999_124547114_124549760
transcript_136808.known	chr8	-	690	7	FSM	ENSG00000147687.19	ENST00000520938.3	690	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	139.967555764422	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTAAAACCAAAGTCT	-17	True	NA	NA	False	NA	NA	NA	124539088	124508602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124522936_124523003_124538927
transcript_136811.known	chr8	+	3199	2	FSM	ENSG00000170881.5	ENST00000303545.4	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATTGTTATATAGTGT	-3	True	NA	NA	False	NA	NA	NA	124474879	124488618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124475291_124485830
transcript_136812.known	chr8	-	1029	12	FSM	ENSG00000147687.19	ENST00000276692.11	1029	12	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_10	48.0462931035448	5497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-14	True	NA	NA	False	AATAAA	-25	NA	124539085	124488497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_136813.known	chr8	-	915	10	FSM	ENSG00000147687.19	ENST00000630259.1	915	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	128.569431691332	2600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATACTATATATCGG	-17	True	NA	NA	False	AATAAA	-22	NA	124539088	124488500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124522936_124523003_124539024
transcript_136814.known	chr8	-	990	13	FSM	ENSG00000147687.19	ENST00000522810.5	990	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	143.52591229461	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATACTATTAAAGTATT	1	True	NA	NA	False	AATACA	-7	NA	124539070	124488629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124503839_124503952_124504274_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_136815.known	chr8	-	677	9	FSM	ENSG00000147687.19	ENST00000519776.5	677	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	113.105039675516	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGTTTTCAGAACT	NA	False	NA	NA	False	NA	NA	NA	124539109	124495471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522936_124523003_124539024
transcript_136816.known	chr8	-	726	9	FSM	ENSG00000147687.19	ENST00000605953.5	726	9	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_7	46.3530945568902	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTTTGCATTG	-11	True	NA	-30	True	ATTAAA	-1	NA	124539082	124504173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_136817.known	chr8	+	1423	4	FSM	ENSG00000147684.10	ENST00000677950.1	1423	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	1300.3032979527	5804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATACAGGACTTTTT	37	True	NA	NA	False	NA	NA	NA	124539177	124550768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124549760
transcript_136818.known	chr8	+	1879	11	FSM	ENSG00000104549.12	ENST00000523430.5	1879	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	299.118120480856	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCGTGTCTTTTTGTT	NA	False	NA	12	True	AATAAA	-11	NA	124998496	125022281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124998606_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_13682.nnic	chr1	+	756	4	NNC	ENSG00000143494.16	novel	581	3	NA	NA	0	476	at_least_one_novel_splicesite	FALSE	canonical	3	64	junction_3	61.2662676809642	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTTCTCAGTGTGAATA	1	True	NA	14	True	AATGAA	-17	NA	212950540	212952288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212950741_212951181_212951348_212951588_212951819_212952128
transcript_136823.known	chr8	+	2962	11	FSM	ENSG00000104549.12	ENST00000265896.10	2962	11	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_1	37.4460945894228	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTGTCTTTTTGTTTC	0	True	NA	14	True	AATAAA	-13	NA	124998504	125022283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124999695_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_136832.nic	chr8	+	1244	8	NIC	ENSG00000156831.8	novel	1188	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_1	51.6601927039	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	-14	True	NA	11	True	AATAAA	-17	NA	125091840	125367120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_136835.known	chr8	+	1037	7	FSM	ENSG00000156831.8	ENST00000522563.5	1037	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	49.340371119624	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTGTTCTATAATG	15	True	NA	-34	True	AAAACA	-42	NA	125091869	125367075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_136845.known	chr8	+	841	7	FSM	ENSG00000156831.8	ENST00000517532.5	841	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	53.7824837243089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCGCATGATTGAGTC	-11	True	NA	NA	False	AATAAA	-31	NA	125091843	125357771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711
transcript_136847.known	chr8	+	848	5	FSM	ENSG00000156831.8	ENST00000519010.5	848	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	75.579014944626	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGGGAAATTGGGAAAAC	-11	True	NA	NA	False	NA	NA	NA	125091843	125182519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091901_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_136854.known	chr8	+	787	5	FSM	ENSG00000156831.8	ENST00000523741.5	787	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	81.5915896401093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCAACATGCTTTGCT	NA	False	NA	-99	True	ACTAAA	-9	NA	125091678	125182256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091901_125102013_125102147_125102316_125102488_125151170_125151278_125182102
transcript_136863.known	chr8	+	592	4	FSM	ENSG00000156831.8	ENST00000523824.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	74.0510334536633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCCTTATCCTTAATG	15	True	NA	NA	False	NA	NA	NA	125091869	125151369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170
transcript_136867.known	chr8	+	1188	8	FSM	ENSG00000156831.8	ENST00000287437.8	1188	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	30.5654199702733	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	5	True	NA	11	True	AATAAA	-17	NA	125091859	125367120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_136868.known	chr8	+	1183	5	FSM	ENSG00000156831.8	ENST00000520866.5	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	38.1469199280886	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTTAGTGGACATAA	-11	True	NA	NA	False	AATAAA	-12	NA	125091843	125182796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_136870.known	chr8	-	4139	29	FSM	ENSG00000164961.16	ENST00000318410.12	4139	29	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_17	38.9297345828851	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCTCGCTTATGATTCA	-26	True	NA	-1	True	AGTAAA	-22	NA	125091792	125024259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
transcript_136872.known	chr8	+	3596	3	FSM	ENSG00000173334.4	ENST00000311922.4	3596	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	10.5	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGTGAATTTCTTT	2	True	NA	15	True	AATAAA	-15	NA	125430357	125438403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125431263_125433316_125433610_125436005
transcript_136877.nic	chr8	+	507	3	ISM	ENSG00000253438.5	ENST00000645463.1	906	7	-149	700369	-131	-2424	5prime_fragment	FALSE	canonical	1	2	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCCATGAAGCTTTTGTG	1173	False	NA	NA	False	AATAAA	-13	NA	126557743	126592493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_126557932_126589191_126589291_126592273
transcript_136878.nnic	chr8	+	858	3	FSM	ENSG00000253438.5	ENST00000690964.1	730	3	-131	3	-131	-3	multi-exon	FALSE	canonical	2	2	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCAGTTTGTGATGGTTT	1173	False	NA	NA	False	AATAAA	-18	NA	126557743	126594914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_126557932_126589191_126589291_126594343
transcript_136879.known	chr8	+	498	3	FSM	ENSG00000253438.5	ENST00000517773.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTGTTATGAAATTGGG	2	True	NA	NA	False	NA	NA	NA	126557885	126617741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_126557932_126589191_126589291_126617388
transcript_136880.known	chr8	+	562	3	FSM	ENSG00000253438.5	ENST00000517915.2	562	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGTGTCTGTCACTTCC	28	False	NA	NA	False	AATACA	-23	NA	126557911	126634987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_126557932_126589191_126589291_126634544
transcript_136881.known	chr8	+	420	2	FSM	ENSG00000253438.5	ENST00000521586.2	420	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATAAGTGGCAGAGTTT	NA	False	NA	NA	False	AATAAA	-23	NA	127339146	127392634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127339436_127392503
transcript_136882.nnic	chr8	-	451	2	Intergenic	novelGene_80	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGAATCTGCAGATT	NA	False	NA	NA	False	AATAAA	-23	NA	127312075	127311479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr8_-_127311690_127311834
transcript_136884.known	chr8	-	844	2	FSM	ENSG00000168672.4	ENST00000517458.1	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACTATCAACTGATTCAG	2053	False	NA	49	True	TTTAAA	-6	NA	126556419	126552814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_126553504_126556264
transcript_136887.known	chr8	-	1095	3	FSM	ENSG00000249375.8	ENST00000672942.1	1095	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCTTCTTTTATTTT	1879	False	NA	NA	False	AGTAAA	-18	NA	127738987	127730156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_127730923_127733824_127733960_127738793
transcript_136888.known	chr8	+	3721	3	FSM	ENSG00000136997.21	ENST00000621592.8	3721	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	65.5	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGACTCCTAGAATAATC	-2	True	NA	NA	False	AATAAA	-17	NA	127736230	127742951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127736624_127738247_127739020_127740395
transcript_136892.known	chr8	+	1701	9	FSM	ENSG00000249859.13	ENST00000667305.1	1701	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	30.5122926047847	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-13	True	NA	38	True	ATTAAA	-18	NA	127794525	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128070159_128070273_128096517_128096655_128100979
transcript_136895.known	chr8	+	1744	9	FSM	ENSG00000249859.13	ENST00000659912.1	1744	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.9392329623877	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	10	True	NA	38	True	ATTAAA	-18	NA	127795819	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796072_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128070159_128070273_128096517_128096655_128100979
transcript_136896.known	chr8	+	1581	8	FSM	ENSG00000249859.13	ENST00000657289.1	1581	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	35.26112503559	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-6	True	NA	38	True	ATTAAA	-18	NA	127794532	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_136899.known	chr8	+	1585	8	FSM	ENSG00000249859.13	ENST00000656402.1	1585	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	38.3544159711733	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	51	False	NA	38	True	ATTAAA	-18	NA	127794589	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127795893_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070362_128096517_128096655_128100979
transcript_136903.known	chr8	+	1410	7	FSM	ENSG00000249859.13	ENST00000665737.1	1410	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	25.9914515861572	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	20	True	NA	36	True	ATTAAA	-16	NA	127794558	128101254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_136905.known	chr8	+	1433	7	FSM	ENSG00000249859.13	ENST00000668123.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	40.4162371111194	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGTGGTCTTTCTTTAT	-2	True	NA	37	True	ATTAAA	-17	NA	127795807	128101255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096520_128096655_128100979
transcript_136906.known	chr8	+	1321	6	FSM	ENSG00000249859.13	ENST00000670223.1	1321	6	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	32.9581552881832	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-2	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
transcript_136907.known	chr8	+	1275	6	FSM	ENSG00000249859.13	ENST00000653522.1	1275	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	30.348640826238	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-12	True	NA	38	True	ATTAAA	-18	NA	127794526	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_136908.known	chr8	+	1353	6	FSM	ENSG00000249859.13	ENST00000657211.1	1353	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	36.5546166714958	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-1	True	NA	38	True	ATTAAA	-18	NA	127794537	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128070159_128070362_128096517_128096655_128100979
transcript_136911.known	chr8	+	1330	6	FSM	ENSG00000249859.13	ENST00000663059.1	1330	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	44.9310583004674	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-11	True	NA	38	True	ATTAAA	-18	NA	127795798	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128096520_128096655_128100979
transcript_136913.known	chr8	+	1363	6	FSM	ENSG00000249859.13	ENST00000659625.1	1363	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	40.0349847008838	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-8	True	NA	38	True	ATTAAA	-18	NA	127795801	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796009_127890588_127890999_127989161_127989292_128070159_128070362_128096517_128096655_128100979
transcript_136915.known	chr8	+	1152	5	FSM	ENSG00000249859.13	ENST00000662766.1	1152	5	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	38.4602067077128	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	-2	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128096517_128096655_128100979
transcript_136921.known	chr8	+	897	4	FSM	ENSG00000249859.13	ENST00000667204.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.31245915016974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACGTTATATTTCTATCT	61	False	NA	NA	False	AATAAA	-22	NA	127794599	127932701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127795893_127796009_127890588_127890999_127932464
transcript_136922.known	chr8	+	1036	4	FSM	ENSG00000249859.13	ENST00000664139.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.64997911442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTCTATCTTATAATA	-8	True	NA	NA	False	AATAAA	-29	NA	127794530	127932708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127795893_127796072_127890588_127890999_127932464
transcript_136923.known	chr8	+	861	3	FSM	ENSG00000249859.13	ENST00000664214.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	37	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTATCTTATAAT	-12	True	NA	NA	False	AATAAA	-28	NA	127794526	127932707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127932464
transcript_136924.known	chr8	+	1516	3	FSM	ENSG00000249859.13	ENST00000669416.1	1516	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTATCTTATAATACA	124	False	NA	NA	False	AATAAA	-31	NA	127795148	127932710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796009_127890588_127890999_127932464
transcript_136925.known	chr8	+	1546	3	FSM	ENSG00000249859.13	ENST00000661160.1	1546	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTCTATCTTATAATA	155	False	NA	NA	False	AATAAA	-29	NA	127795179	127932708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796072_127890588_127890999_127932464
transcript_136926.known	chr8	+	1017	5	FSM	ENSG00000249859.13	ENST00000656880.1	1017	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	32.1510108705776	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTAAGTGCCATCCTC	-2	True	NA	NA	False	CATAAA	-30	NA	127794536	127996670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_127996560
transcript_13693.nnic	chr1	-	2253	9	NNC	ENSG00000174606.14	novel	4690	9	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_8	101.025677429058	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	-41	True	NA	10	True	AATATA	-26	NA	213015513	212994728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015148
transcript_13694.nic	chr1	-	2186	9	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_8	80.0546688207502	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	335	False	NA	10	True	AATATA	-26	NA	213015523	212994728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015225
transcript_136941.nic	chr8	-	1918	14	NIC	ENSG00000153310.20	novel	2024	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_12	350.52040769835	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-5	True	NA	-6	True	AATAAA	-22	NA	130016451	129841469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016369
transcript_136942.known	chr8	-	1902	14	FSM	ENSG00000153310.20	ENST00000519110.5	1902	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	375.780702131808	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-6	True	AATAAA	-22	NA	130016672	129841469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016606
transcript_136950.known	chr8	-	2021	13	FSM	ENSG00000153310.20	ENST00000519540.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_12	261.821451035285	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCAGCTTTCATT	22	False	NA	-33	True	NA	NA	NA	129939872	129841496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
transcript_136953.known	chr8	-	1817	13	FSM	ENSG00000153310.20	ENST00000517654.5	1817	13	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_11	346.578514433118	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-5	True	NA	-20	True	AATAAA	-8	NA	130016451	129841483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016369
transcript_136954.nic	chr8	-	1849	13	NIC	ENSG00000153310.20	novel	1902	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_12	375.219741173977	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	NA	False	NA	-6	True	AATAAA	-22	NA	130016706	129841469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016606
transcript_13696.known	chr1	-	4690	9	FSM	ENSG00000174606.14	ENST00000366962.8	4690	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	84.3118282034022	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-9	True	NA	-12	True	AATAAA	-15	NA	213015867	212992181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
transcript_136965.known	chr8	-	3798	12	FSM	ENSG00000153310.20	ENST00000519824.6	3798	12	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_11	212.971538082106	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACTCATTTGTTGACA	-41	True	NA	-9	True	AATAAA	-18	NA	129939832	129839592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129939607
transcript_136968.nic	chr8	-	1905	12	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	384	junction_11	293.338097882668	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-21	True	NA	-6	True	AATAAA	-22	NA	129939812	129841469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_136976.nic	chr8	-	1838	11	NIC	ENSG00000153310.20	novel	3798	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	425	junction_9	249.174416824842	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-41	True	NA	-6	True	AATAAA	-22	NA	129939832	129841469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129939607
transcript_136979.known	chr8	-	1700	11	FSM	ENSG00000153310.20	ENST00000522941.5	1700	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	396.234728412339	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAAATAAAAATCAGCT	45	True	NA	-39	True	NA	NA	NA	129939746	129841502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_136983.known	chr8	-	1647	10	FSM	ENSG00000153310.20	ENST00000522250.5	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	340.862558739761	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	200	False	NA	-20	True	AATAAA	-8	NA	129939694	129841483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129939607
transcript_136988.known	chr8	-	533	2	FSM	ENSG00000153310.20	ENST00000523514.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGAGGTTGCAGTGAGCT	-6	True	NA	NA	False	AATACA	-23	NA	130016652	129970508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129970996_130016606
transcript_136990.known	chr8	+	3369	2	FSM	ENSG00000286535.1	ENST00000665729.1	3369	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATTGTGTGAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	130358786	130362461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_130358926_130359231
transcript_136992.known	chr8	+	884	5	FSM	ENSG00000253507.6	ENST00000524275.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	388.892658711887	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTTCATTGTGCTGGA	NA	False	NA	NA	False	NA	NA	NA	131308544	131317632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_131308672_131310552_131310713_131312555_131312730_131315759_131315884_131317333
transcript_13700.nnic	chr1	-	2041	8	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_3	117.861212050965	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	NA	False	NA	10	True	AATATA	-26	NA	213015892	212994728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
transcript_137004.nnic	chr8	+	790	4	NNC	ENSG00000253507.6	novel	1158	5	NA	NA	-47	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_3	426.889785411749	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	27	True	AATAAA	-22	NA	131308497	131315811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_131308672_131310552_131310713_131312555_131312749_131315548
transcript_137012.known	chr8	+	731	4	FSM	ENSG00000253507.6	ENST00000519005.1	731	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_2	212.39167173461	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGAACTGAGGACAACAA	7	False	NA	NA	False	NA	NA	NA	131310471	131317506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_131310713_131312555_131312749_131315759_131315884_131317333
transcript_137014.nnic	chr8	+	1048	4	NNC	ENSG00000253507.6	novel	1158	5	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	54	junction_1	318.422151658245	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	1834	False	NA	31	True	AATAAA	-20	NA	131310439	131317887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_131310713_131312651_131312749_131315759_131315884_131317333
transcript_137028.nnic	chr8	+	730	3	NNC	ENSG00000253507.6	novel	731	4	NA	NA	-33	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	142	junction_2	499.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	1833	False	NA	27	True	AATAAA	-22	NA	131310438	131315811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_131310713_131312555_131312749_131315548
transcript_137030.nnic	chr8	+	1022	3	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	557	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	1832	False	NA	31	True	AATAAA	-20	NA	131310437	131317887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_131310713_131312555_131312749_131317333
transcript_137051.known	chr8	-	1736	12	FSM	ENSG00000129295.10	ENST00000519595.5	1736	12	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_2	5.20171618215272	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAAGATCATAGAACT	-9	True	NA	NA	False	AATAAA	-19	NA	132675592	132572069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_132572481_132583693_132583776_132610161_132610262_132611293_132611364_132615037_132615098_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_137053.nic	chr8	-	1701	11	NIC	ENSG00000129295.10	novel	3343	12	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9.47681381055891	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAAGATCATAGAACT	-6	True	NA	NA	False	AATAAA	-19	NA	132675617	132572069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_132572481_132583693_132583780_132610165_132610262_132611293_132611364_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_137062.nic	chr8	-	960	6	ISM	ENSG00000129295.10	ENST00000250173.5	1672	13	-58	53071	-25	0	5prime_fragment	FALSE	canonical	3	17	junction_1	5.17687164221791	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTCATTCTTTCCTAGG	-6	True	NA	NA	False	AAGAAA	-15	NA	132675617	132625271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_137069.known	chr8	+	3297	20	FSM	ENSG00000129292.21	ENST00000220847.8	3297	20	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_17	28.0741006027573	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGTGAACACTTAATGA	-26	True	NA	NA	False	NA	NA	NA	132775357	132845923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_132775646_132777795_132777912_132794409_132794582_132794732_132794818_132798771_132798861_132803818_132804033_132804614_132804741_132811045_132811129_132814636_132814890_132816887_132817077_132817338_132817546_132824003_132824061_132825263_132825372_132832234_132832400_132836539_132836722_132837711_132837812_132839386_132839583_132842514_132842876_132844155_132844319_132845780
transcript_137071.known	chr8	+	1102	1	FSM	ENSG00000225259.4	ENST00000522430.1	1102	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAATGCCCTTCTGAT	107	False	NA	NA	False	AGTAAA	-23	NA	133408005	133409107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_133408000_133409100
transcript_137072.known	chr8	-	6715	10	FSM	ENSG00000008513.16	ENST00000522652.6	6715	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	6.12825877028341	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGTGTTTGTTGCTTTT	-8	True	NA	-1	True	AATAAA	-21	NA	133571887	133454847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476075_133476277_133476601_133499134_133499190_133545773_133545927_133571692
transcript_137073.known	chr8	-	6951	9	FSM	ENSG00000008513.16	ENST00000521180.5	6951	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	6.48074069840786	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTGGGTGTGTTTGTTG	14	True	NA	-6	True	AATAAA	-16	NA	133571925	133454852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_133459938_133461874_133461995_133463413_133463460_133464777_133464958_133465893_133466091_133475718_133476601_133499134_133499190_133545773_133545927_133571692
transcript_137077.nnic	chr8	-	1094	3	NNC	ENSG00000008513.16	novel	393	2	NA	NA	-109	255	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCATCCGTATACTTTAT	2	True	NA	NA	False	AATAAA	-26	NA	133572049	133566726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_133567321_133570109_133570253_133571692
transcript_137078.nnic	chr8	-	830	3	NNC	ENSG00000008513.16	novel	393	2	NA	NA	-109	-9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTAAGCCTGTTCCAC	2	True	NA	NA	False	AATAAA	-15	NA	133572049	133566990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_133567321_133570109_133570253_133571692
transcript_137079.known	chr8	-	454	2	FSM	ENSG00000008513.16	ENST00000521627.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTCTTTTGTGTGATT	19	True	NA	NA	False	ATTAAA	-13	NA	133489633	133488081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_133488440_133489537
transcript_137080.known	chr8	+	679	1	FSM	ENSG00000261220.2	ENST00000561761.2	679	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTTATTGTATGGAT	942	False	NA	NA	False	AATAAA	-25	NA	133573182	133573861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_133573200_133573900
transcript_137081.known	chr8	+	1978	9	FSM	ENSG00000131773.14	ENST00000355849.10	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	11.9576074111839	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGTGTGAGCTAAC	1	True	NA	14	True	AATAAA	-14	NA	135457455	135647610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_135457955_135521236_135521356_135542653_135542771_135548753_135548901_135557447_135557588_135581877_135582074_135606954_135607038_135645058_135645118_135646992
transcript_13709.known	chr1	-	851	3	FSM	ENSG00000174606.14	ENST00000481918.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	45	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGCAAAATATTATTG	-21	True	NA	NA	False	ATTAAA	-16	NA	213015493	213008209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_213008467_213013092_213013419_213015225
transcript_137094.nnic	chr8	-	1243	4	NNC	ENSG00000147724.12	novel	7401	20	NA	NA	-37368	-24135	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.49691252107735	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGGAGTTAGCACATTA	NA	False	NA	-19	True	AATAAA	-26	NA	138189772	138167156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_138168050_138177346_138177421_138178534_138178691_138189652
transcript_137095.known	chr8	-	576	2	FSM	ENSG00000169427.8	ENST00000523653.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTGGGGAGGGTCAGTG	61	False	NA	NA	False	NA	NA	NA	139602064	139601077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_139601602_139602012
transcript_137097.nic	chr8	-	1500	2	ISM	ENSG00000167632.18	ENST00000438773.4	6899	23	0	722265	0	-44697	5prime_fragment	FALSE	canonical	3	60	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTATCAACTGTTTCATT	-1	True	NA	NA	False	AATAAA	-15	NA	140457744	140449989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_140451384_140457638
transcript_137099.known	chr8	+	453	3	FSM	ENSG00000253574.5	ENST00000518354.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCAATTTTCATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	139911237	139916620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_139911301_139913924_139914092_139916397
transcript_137101.known	chr8	+	2481	3	FSM	ENSG00000104472.10	ENST00000220913.10	2481	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	46.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGTTTGGTGGCCTGTC	-7	True	NA	4	True	ATTAAA	-23	NA	140511321	140517154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_140511647_140514368_140514496_140515125
transcript_137103.known	chr8	+	811	3	FSM	ENSG00000104472.10	ENST00000519618.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	150	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAAGATCTGTACATA	-8	True	NA	NA	False	AATATA	-6	NA	140511981	140515765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_140512026_140514368_140514496_140515125
transcript_137106.known	chr8	+	1678	2	FSM	ENSG00000104472.10	ENST00000519533.1	1678	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAAAAGTTTATAA	-18	True	NA	NA	False	NA	NA	NA	140511310	140516467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_140511647_140515125
transcript_137107.known	chr8	-	4388	33	FSM	ENSG00000169398.19	ENST00000519993.5	4388	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.540206477717	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTTGTTGTAATATC	699	False	NA	-23	True	ATTAAA	-15	NA	141001379	140658404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140669726_140669736_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140762367_140762389_140764233_140764291_140769574_140769593_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140890542_140890770_141001124
transcript_13711.known	chr1	-	1243	3	FSM	ENSG00000174606.14	ENST00000460337.5	1243	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	22	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTCCCATATACTTG	2440	False	NA	-13	True	AATAAA	-20	NA	213013418	213006538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_213007199_213008209_213008467_213013092
transcript_137110.known	chr8	-	4955	32	FSM	ENSG00000169398.19	ENST00000522684.5	4955	32	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_31	82.777022052093	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATCTTTGGATCTGTG	26	True	NA	NA	False	AATACA	-21	NA	141001233	140657899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_140659679_140664916_140664998_140668268_140668425_140674297_140674405_140675459_140675500_140686631_140686695_140700890_140701023_140702569_140702708_140706118_140706206_140717597_140717710_140735250_140735456_140739017_140739108_140743229_140743331_140744651_140744768_140746759_140746861_140752231_140752317_140761164_140761263_140764233_140764291_140789473_140789527_140793353_140793385_140800458_140800577_140803542_140803651_140818276_140818355_140818879_140819021_140830471_140830527_140846259_140846323_140846598_140846679_140864311_140864400_140879470_140879638_140890542_140890770_140925660_140925750_141001124
transcript_137115.known	chr8	-	571	4	FSM	ENSG00000169398.19	ENST00000520892.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	154.635054240622	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGATTTCTTTTGCTT	1141	False	NA	NA	False	NA	NA	NA	141000937	140879440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_140879638_140890542_140890770_140925660_140925750_141000879
transcript_137116.nic	chr8	-	917	4	ISM	ENSG00000169398.19	ENST00000395218.3	4415	31	64	220780	11	0	5prime_fragment	FALSE	canonical	3	170	junction_3	95.5091618641898	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	10	True	NA	-1	True	AATAAA	-17	NA	141001249	140879161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_140879638_140890542_140890770_140925660_140925750_141001124
transcript_137118.known	chr8	-	602	4	FSM	ENSG00000169398.19	ENST00000520045.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	167.113401284544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTGGAAGTAAGATAC	-26	True	NA	NA	False	NA	NA	NA	141001285	140879481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_140879638_140890542_140890770_140948665_140948724_141001124
transcript_13712.known	chr1	+	5505	15	FSM	ENSG00000136643.12	ENST00000366960.8	5505	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	18.9693630545118	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTCATTTGATTTTT	-47	True	NA	NA	False	CATAAA	-15	NA	213051240	213274774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_213051510_213071005_213071042_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213176399_213176493_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
transcript_137120.known	chr8	-	863	3	FSM	ENSG00000169398.19	ENST00000519881.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	79	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-25	True	NA	-1	True	AATAAA	-17	NA	141001284	140879161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_140879638_140890542_140890770_141001124
transcript_137125.known	chr8	-	1490	3	FSM	ENSG00000253210.3	ENST00000664702.2	1652	3	162	0	-27	0	multi-exon	FALSE	canonical	1	3	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATGTACATATCGAATA	1962	False	NA	-42	True	NA	NA	NA	141128148	141124716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_141125859_141126205_141126472_141128066
transcript_137126.nnic	chr8	-	775	3	NNC	ENSG00000253210.3	novel	776	2	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGACGCTGCAGGATGTC	1820	False	NA	-3	True	AATAAA	-19	NA	141128290	141125939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_141126472_141127538_141127558_141128066
transcript_137127.known	chr8	-	483	2	FSM	ENSG00000253210.3	ENST00000520885.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCGAGCACAGCATTGTG	1989	False	NA	-107	True	TATAAA	-25	NA	141128121	141126043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_141126472_141128066
transcript_137130.nnic	chr8	+	618	2	Antisense	novelGene_ENSG00000022567.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGCTCATCTGGCTAACAT	NA	False	NA	NA	False	AATAAA	-17	NA	141221528	141223007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_141221738_141222598
transcript_137133.nic	chr8	+	1346	7	NIC	ENSG00000184489.13	novel	2849	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	70.1634995326392	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	-4	True	NA	16	True	AATAAA	-13	NA	141392019	141431520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_141392085_141421387_141421611_141422180_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_137137.nnic	chr8	+	1844	6	NNC	ENSG00000184489.13	novel	2849	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	23	junction_2	68.2952414154896	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	-4	True	NA	16	True	AATAAA	-13	NA	141392019	141431520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_141392085_141421387_141422274_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_137138.known	chr8	+	2849	6	FSM	ENSG00000184489.13	ENST00000521578.6	2849	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	34.2029238516241	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGTATTTTTTCAAT	-3	True	NA	8	True	AGTAAA	-21	NA	141392020	141432454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_137140.known	chr8	+	1866	5	FSM	ENSG00000184489.13	ENST00000520105.5	1866	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	76.3392919799496	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	-29	True	NA	16	True	AATAAA	-13	NA	141391994	141431520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141430926
transcript_137144.known	chr8	-	2110	11	FSM	ENSG00000171045.16	ENST00000519651.5	2110	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	18.2164760587771	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTGGTACTGTATGG	-10	True	NA	9	True	TATAAA	-37	NA	142403168	142270474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142271692_142274780_142274864_142284412_142284486_142300485_142300648_142314383_142314441_142315002_142315090_142318543_142318635_142330900_142330971_142331753_142331832_142354636_142354764_142403103
transcript_137150.known	chr8	-	2687	3	FSM	ENSG00000234616.9	ENST00000571961.7	2687	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGAAAGCCTTCAGCC	NA	False	NA	NA	False	AATAAA	-20	NA	142669994	142658363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142658945_142664477_142666521_142669931
transcript_137152.nnic	chr8	-	796	3	NIC	ENSG00000234616.9	novel	2823	4	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGCCTCAGGTGTTA	-17	True	NA	NA	False	AATAAA	-18	NA	142669986	142657462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_142658081_142658821_142658945_142669931
transcript_137153.known	chr8	-	592	3	FSM	ENSG00000197353.4	ENST00000359228.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	11	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTCCTGTGTGTCTGT	-11	True	NA	61	True	NA	NA	NA	142752532	142750149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142750483_142751050_142751171_142752393
transcript_137154.nnic	chr8	-	464	3	NNC	ENSG00000197353.4	novel	592	3	NA	NA	-19	-60	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	57	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGTCTCCTTTCTGG	-2	True	NA	1	True	NA	NA	NA	142752551	142750209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_142750483_142751050_142751171_142752480
transcript_137157.known	chr8	-	868	4	FSM	ENSG00000180155.20	ENST00000620006.4	868	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.8977121983832	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCCTGTCCAGGGCTAT	9516	False	NA	NA	False	NA	NA	NA	142777022	142774922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142775364_142775592_142775695_142775905_142776122_142776913
transcript_137160.known	chr8	+	740	5	FSM	ENSG00000160932.11	ENST00000521003.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1835.62964333767	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGGTCAGGCCCACCC	12	True	NA	NA	False	NA	NA	NA	143018528	143021902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020261_143020378_143020882_143020992_143021313_143021434_143021565
transcript_137162.known	chr8	+	635	5	FSM	ENSG00000160932.11	ENST00000519611.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1640.87819474817	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCCGATCCCCCAGC	27	False	NA	NA	False	NA	NA	NA	143018543	143021800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020261_143020378_143020887_143020992_143021313_143021434_143021548
transcript_137163.known	chr8	+	868	5	FSM	ENSG00000160932.11	ENST00000522024.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1783.92110251547	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCTTGGTCCCAGGTC	40	False	NA	NA	False	NA	NA	NA	143018556	143021892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143018832_143019120_143020887_143020992_143021313_143021434_143021565
transcript_137165.known	chr8	+	857	4	FSM	ENSG00000160932.11	ENST00000522971.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1744.05013944235	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGGGGAGGGAGGT	25	False	NA	NA	False	NA	NA	NA	143018541	143022182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020916_143020992_143021313_143021434_143021565
transcript_13717.nic	chr1	+	1221	5	ISM	ENSG00000136643.12	ENST00000615329.4	4022	13	52	155425	30	-58665	5prime_fragment	FALSE	canonical	3	124	junction_2	8.26135582092915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTACTCATTTCTTTAGC	-3	True	NA	NA	False	NA	NA	NA	213051284	213118039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_213051510_213071005_213071042_213077695_213077817_213104453_213104570_213117316
transcript_137174.known	chr8	-	995	2	FSM	ENSG00000247317.4	ENST00000517833.2	1036	2	41	0	7	0	multi-exon	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAGGTGAAATAAAT	31	True	NA	NA	False	NA	NA	NA	143018390	142981737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142982502_143018159
transcript_137176.known	chr8	-	759	2	FSM	ENSG00000247317.4	ENST00000518831.1	759	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGAGTGCAGGCCACT	-16	True	NA	NA	False	NA	NA	NA	143018437	143016665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143017147_143018159
transcript_137177.known	chr8	+	1079	4	FSM	ENSG00000160932.11	ENST00000521182.5	1079	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	1480.84998114821	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	29	False	NA	14	True	AATAAA	-16	NA	143018545	143022409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020882_143020992_143021348_143021434_143021565
transcript_137178.known	chr8	+	427	4	FSM	ENSG00000160932.11	ENST00000523847.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1600.09090019564	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTTGCGCTTCCATCT	36	False	NA	9	True	NA	NA	NA	143018552	143023832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143023668
transcript_137179.known	chr8	+	971	4	FSM	ENSG00000160932.11	ENST00000519546.5	971	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	1582.55686223978	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCACTTCAAGGGCAG	35	False	NA	NA	False	NA	NA	NA	143018551	143022255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021548
transcript_13718.known	chr1	+	5454	14	FSM	ENSG00000136643.12	ENST00000366959.4	5454	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	35.919041117392	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTCTCATTTGATTTT	-33	True	NA	NA	False	CATAAA	-14	NA	213051254	213274773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_213051510_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213176399_213176493_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
transcript_137180.known	chr8	+	490	3	FSM	ENSG00000160932.11	ENST00000520531.5	490	3	0	0	0	0	multi-exon	FALSE	canonical	3	1195	junction_1	1321	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGGCTTCCATGGGC	11	True	NA	NA	False	NA	NA	NA	143018527	143021640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020887_143020992_143021313
transcript_137181.known	chr8	-	834	3	FSM	ENSG00000247317.4	ENST00000522060.1	834	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACAGCTATAAAGTCCT	40	True	NA	-37	True	GATAAA	-6	NA	143018381	142982048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142982502_143009048_143009208_143018159
transcript_137187.nic	chr8	+	1267	7	NIC	ENSG00000177335.12	novel	1199	8	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	17.220788470786	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTCCATGACTACCA	30	False	NA	19	True	ATTAAA	-16	NA	143039131	143053444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_143039570_143042957_143043088_143043177_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_137188.nnic	chr8	+	1086	6	NNC	ENSG00000177335.12	novel	1554	6	NA	NA	-52	672	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	13.3476589707709	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATCTTCTGTAGCAGAGA	55	False	NA	52	True	TATAAA	-35	NA	143039156	143049924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_143039570_143043177_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143049731
transcript_137189.known	chr8	+	1554	6	FSM	ENSG00000177335.12	ENST00000517653.5	1554	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.2567051239665	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTCATGGGAAGCCTT	0	True	NA	NA	False	NA	NA	NA	143039208	143053938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143039570_143043177_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_137192.nic	chr8	+	1357	6	FSM	ENSG00000177335.12	ENST00000523099.6	1255	6	-102	0	-77	0	multi-exon	FALSE	canonical	2	10	junction_1	13.6088206689632	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTCCATGACTACCA	30	False	NA	19	True	ATTAAA	-16	NA	143039131	143053444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143039570_143042957_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_137197.nnic	chr8	+	1109	5	NIC	ENSG00000177335.12	novel	1255	6	NA	NA	-134	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	17.5837282736057	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTCCATGACTACCA	NA	False	NA	19	True	ATTAAA	-16	NA	143039074	143053444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_143039570_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_137204.nnic	chr8	+	670	3	NIC	ENSG00000177335.12	novel	1106	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTCCATGACTACCA	0	True	NA	19	True	ATTAAA	-16	NA	143039208	143053444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_143039570_143049208_143049299_143053225
transcript_137205.known	chr8	+	530	3	ISM	ENSG00000177335.12	ENST00000520786.4	1085	4	3943	0	206	0	3prime_fragment	FALSE	canonical	3	35	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTTGGCTGTGTGTCTC	34	False	NA	18	True	AATACA	-16	NA	143043207	143047984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_143043263_143044648_143044818_143047678
transcript_137207.known	chr8	+	1300	4	FSM	ENSG00000261667.2	ENST00000562505.2	1300	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTCATTCCTTCCTTC	18	True	NA	NA	False	AATAAA	-15	NA	143080629	143083486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143080660_143081035_143081127_143081210_143081328_143082424
transcript_137213.known	chr8	-	660	3	FSM	ENSG00000253716.7	ENST00000517411.3	684	3	21	3	-5	0	multi-exon	FALSE	canonical	2	6	junction_1	30.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-7	True	NA	-6	True	AATAAA	-20	NA	143281670	143280160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143280516_143280881_143280998_143281481
transcript_137215.known	chr8	-	379	2	FSM	ENSG00000253716.7	ENST00000518073.2	1048	2	2	667	1	0	multi-exon	FALSE	canonical	3	67	junction_1	0	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGTTGGAGAATCAA	-27	True	NA	-14	True	ATTAAA	-16	NA	143281690	143280827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143280998_143281481
transcript_137217.known	chr8	-	1527	1	FSM	ENSG00000253716.7	ENST00000671046.1	1527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-24	True	NA	-6	True	AATAAA	-20	NA	143281687	143280160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143280200_143281700
transcript_137218.known	chr8	-	499	2	FSM	ENSG00000253716.7	ENST00000524335.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCTACTCATCTGGAAAA	-2	True	NA	NA	False	NA	NA	NA	143281665	143281069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143281385_143281481
transcript_137219.known	chr8	-	1942	14	FSM	ENSG00000184428.13	ENST00000329245.9	1942	14	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_9	23.4008041130234	907	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCAGGCCGGCCGGGCA	-11	True	NA	5	True	AATAAA	-34	NA	143334880	143309323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334739
transcript_13722.known	chr1	+	1745	12	FSM	ENSG00000143499.14	ENST00000366957.10	1745	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	4.94097390607316	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTTTGTATTTTCTT	-33	True	NA	21	True	ATTAAA	-13	NA	214281158	214337131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214332193_214334199_214334309_214336703
transcript_137220.known	chr8	-	1918	1	FSM	ENSG00000254389.3	ENST00000518049.1	1918	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGATGGAGTCTTG	78	False	NA	-7	True	NA	NA	NA	143368548	143366630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143366600_143368500
transcript_137223.known	chr8	+	417	2	FSM	ENSG00000254338.1	ENST00000519762.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTTCCTTCAGCTCT	9470	False	NA	12	True	ATTAAA	-21	NA	143417678	143419150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143417920_143418974
transcript_137228.known	chr8	-	3270	12	FSM	ENSG00000014164.7	ENST00000262577.6	3270	12	0	0	0	0	multi-exon	TRUE	canonical	3	249	junction_10	27.9970482505532	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGCTTGTCCTGACT	3	True	NA	-5	True	AATAAA	-15	NA	143541447	143437658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143438088_143440040_143440364_143440935_143441121_143465716_143465849_143468208_143468279_143468381_143468541_143468616_143468660_143475397_143475586_143507745_143507900_143536256_143536454_143538002_143539321_143541375
transcript_13723.known	chr1	+	3809	11	FSM	ENSG00000143499.14	ENST00000491455.5	3809	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	3.45832329315812	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTTTGTATTTTCTT	6	True	NA	21	True	ATTAAA	-13	NA	214281101	214337131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214334309_214336703
transcript_137230.known	chr8	+	2496	14	FSM	ENSG00000104518.11	ENST00000526406.5	2496	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.1803472093883	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	NA	False	NA	13	True	AATAAA	-19	NA	143553206	143563062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143553761_143555058_143555197_143555933_143556031_143558361_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_137235.known	chr8	+	1723	11	FSM	ENSG00000104518.11	ENST00000262580.9	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	27.7937043231017	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	-17	True	NA	13	True	AATAAA	-19	NA	143558345	143563062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_137243.known	chr8	+	691	4	FSM	ENSG00000104518.11	ENST00000525208.1	691	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	101.068733488102	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	3649	False	NA	13	True	AATAAA	-19	NA	143562049	143563062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143562132_143562208_143562351_143562447_143562522_143562669
transcript_137249.known	chr8	-	1118	9	FSM	ENSG00000104529.19	ENST00000534380.6	1118	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1407.62951779756	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	313	False	NA	-42	True	ATTAAA	-6	NA	143597362	143579735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143593874_143594072_143597347
transcript_13725.known	chr1	-	13360	19	FSM	ENSG00000152104.12	ENST00000366956.10	13360	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	9.8124385662935	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACATCTTCTCTTTTCTG	-16	True	NA	-5	True	AATAAA	-19	NA	214551602	214348699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_214358051_214364511_214364676_214369456_214369692_214372710_214372840_214376218_214376438_214377958_214378103_214383310_214384789_214386843_214386923_214390987_214391046_214393694_214393778_214394898_214394987_214397912_214398002_214401684_214401773_214402882_214402954_214411683_214411752_214414628_214414727_214451804_214451975_214464629_214464958_214551182
transcript_137256.known	chr8	-	2387	8	FSM	ENSG00000104529.19	ENST00000532741.5	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	1149.16017249155	4261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	7215	False	NA	-34	True	ATTAAA	-14	NA	143590460	143579727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990
transcript_13727.nic	chr1	-	1488	3	ISM	ENSG00000152104.12	ENST00000543945.5	3842	18	-480	93585	-101	13366	5prime_fragment	FALSE	canonical	3	51	junction_1	2.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAACTAGCTAGACAT	97	False	NA	NA	False	AAAAAG	-8	NA	214551703	214451335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_214451975_214464629_214464958_214551182
transcript_137276.known	chr8	-	2678	6	FSM	ENSG00000104524.14	ENST00000220966.10	2678	6	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	12.6237870704476	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGTC	8434	False	NA	NA	False	NA	NA	NA	143609614	143603912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143605883_143606061_143606155_143606466_143606680_143606952_143607133_143608061_143608127_143609457
transcript_137284.known	chr8	-	1458	8	FSM	ENSG00000104529.19	ENST00000317198.10	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	1129.84331584842	4544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTGGCCTGTCTCCCTC	287	False	NA	-3	True	ATTAAA	-45	NA	143597388	143579696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143596878
transcript_137285.known	chr8	-	533	3	FSM	ENSG00000104529.19	ENST00000530109.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	3516	junction_1	18	3975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	9203	False	NA	-34	True	ATTAAA	-14	NA	143580740	143579727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505
transcript_137286.known	chr8	-	886	7	FSM	ENSG00000104529.19	ENST00000534377.6	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_6	1362.60799775855	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	276	False	NA	-42	True	ATTAAA	-6	NA	143597399	143579735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586850_143597347
transcript_137287.known	chr8	-	899	8	FSM	ENSG00000104529.19	ENST00000529516.6	899	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	1311.40899456287	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	278	False	NA	-42	True	ATTAAA	-6	NA	143597397	143579735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586850_143597347
transcript_137288.known	chr8	-	840	7	FSM	ENSG00000104529.19	ENST00000531621.5	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	1412.9110218112	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	275	False	NA	-35	True	ATTAAA	-13	NA	143597400	143579728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586728_143586853_143597347
transcript_137289.known	chr8	-	861	8	FSM	ENSG00000104529.19	ENST00000529007.5	861	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1112.17874059002	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	288	False	NA	-35	True	ATTAAA	-13	NA	143597387	143579728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
transcript_137290.known	chr8	-	831	7	FSM	ENSG00000104529.19	ENST00000533833.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1431.08928986124	2941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	247	False	NA	-34	True	ATTAAA	-14	NA	143597428	143579727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586728_143586853_143597347
transcript_137291.known	chr8	-	1155	9	FSM	ENSG00000104529.19	ENST00000533494.6	1155	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	1405.31399961005	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	310	False	NA	-42	True	ATTAAA	-6	NA	143597365	143579735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143592714_143592943_143597347
transcript_137292.known	chr8	-	419	4	FSM	ENSG00000104529.19	ENST00000532400.1	419	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1506.33130485959	3324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTCCTGGTCATTTCC	279	False	NA	-28	True	ATTAAA	-20	NA	143597396	143579721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580174_143586753_143586853_143597347
transcript_137296.known	chr8	-	1324	11	FSM	ENSG00000104522.16	ENST00000529064.5	1324	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	218.131244896278	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-10	True	NA	-5	True	AATAAA	-17	NA	143617482	143612617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617427
transcript_13730.known	chr1	+	10290	20	FSM	ENSG00000117724.14	ENST00000366955.8	10290	20	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_11	94.0163538552935	2792	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATTCCTAAGTGTAAA	-3	True	NA	27	True	AATAAA	-24	NA	214603194	214664571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920_214643325_214644556_214647401_214648674_214648828_214651709_214651887_214652827_214652990_214655240_214655404_214656932_214657410_214658849_214659029_214663590
transcript_137301.known	chr8	-	1345	11	FSM	ENSG00000104522.16	ENST00000425753.7	1345	11	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_10	80.4537755484477	4075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-17	True	NA	-5	True	AATAAA	-17	NA	143617549	143612617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_137302.known	chr8	-	541	2	FSM	ENSG00000104522.16	ENST00000527677.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGCCTTGGCAGCTCT	4657	False	NA	-8	True	AATAAA	-14	NA	143613391	143612620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143612966_143613195
transcript_137305.known	chr8	+	3960	2	FSM	ENSG00000183309.12	ENST00000526926.6	3960	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTCAGTAGTTC	-19	True	NA	NA	False	NA	NA	NA	143636018	143653730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143636146_143649897
transcript_137306.known	chr8	+	577	6	FSM	ENSG00000181135.16	ENST00000528456.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.13687742827162	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGAAGGGCTTCAGGCTG	-9	True	NA	NA	False	AAGAAA	-41	NA	143684461	143693772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691599_143691714_143692244_143692331_143693670
transcript_137308.known	chr8	+	567	5	FSM	ENSG00000181135.16	ENST00000534303.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.73205080756888	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCAAGCCCACGGCTTTCC	-18	True	NA	NA	False	NA	NA	NA	143684452	143693839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691599_143691714_143693670
transcript_137309.known	chr8	+	2114	5	FSM	ENSG00000181135.16	ENST00000533031.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.9474565306379	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCGTGTTTCAGGTT	-15	True	NA	-19	True	NA	NA	NA	143684455	143695356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691233_143691599_143691714_143693670
transcript_137310.known	chr8	+	444	2	FSM	ENSG00000181135.16	ENST00000525619.5	444	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCTGGGCACGCACCT	-9	True	NA	NA	False	AATACA	-4	NA	143684461	143690419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143684543_143690056
transcript_137314.known	chr8	+	1871	14	FSM	ENSG00000181085.15	ENST00000338033.9	1871	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	7.72607971045521	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	-6	True	NA	13	True	AATAAA	-18	NA	143716348	143722458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143719157_143719342_143719483_143720229_143720288_143720702_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
transcript_137321.known	chr8	-	538	2	FSM	ENSG00000180900.20	ENST00000531163.5	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTCTGCCTGTCCAT	1600	False	NA	-6	True	AATAAA	-16	NA	143791542	143790924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143791309_143791388
transcript_137326.known	chr8	-	1842	12	FSM	ENSG00000179950.14	ENST00000453551.6	1842	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_11	597.939492226125	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	3	True	NA	-31	True	GATAAA	-25	NA	143829026	143816376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_137327.known	chr8	-	1868	12	FSM	ENSG00000179950.14	ENST00000526683.6	1868	12	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_7	445.979060398635	2242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGCGTGTGTCCTTAG	11	True	NA	2	True	NA	NA	NA	143829315	143816343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_137333.known	chr8	-	1804	11	FSM	ENSG00000179950.14	ENST00000313352.11	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	566.651074295285	1678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-10	True	NA	-31	True	GATAAA	-25	NA	143829039	143816376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_137334.known	chr8	-	1821	11	FSM	ENSG00000179950.14	ENST00000349157.10	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_7	360.966258810986	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	7025	False	NA	-31	True	GATAAA	-25	NA	143829352	143816376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_137360.known	chr8	-	604	5	FSM	ENSG00000179950.14	ENST00000532127.5	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_1	432.043617589706	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGAGGGCAGCCGGCCAG	7	True	NA	NA	False	NA	NA	NA	143829319	143820425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_137365.known	chr8	-	1736	11	FSM	ENSG00000179950.14	ENST00000456095.6	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_10	599.854282305295	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	7074	False	NA	-31	True	GATAAA	-25	NA	143829303	143816376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143829279
transcript_137366.known	chr8	-	1559	10	FSM	ENSG00000179950.14	ENST00000527197.5	1559	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_9	565.690138974804	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTCCCTCTCCCCGGA	6	True	NA	-40	True	NA	NA	NA	143829320	143816519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143829279
transcript_137367.known	chr8	-	557	4	FSM	ENSG00000179950.14	ENST00000526151.5	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	376.332299969057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTTTCCCCTTCCTGGT	11	True	NA	NA	False	NA	NA	NA	143829315	143821348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143821687_143821817_143821914_143824312_143824400_143829279
transcript_137368.known	chr8	+	2674	2	FSM	ENSG00000287222.1	ENST00000654408.1	2674	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATACTTTTGTCTCTGTG	436	False	NA	NA	False	NA	NA	NA	143829517	143832861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143830039_143830708
transcript_137369.known	chr8	+	1858	7	FSM	ENSG00000178719.17	ENST00000395068.9	1858	7	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_2	46.1642598650611	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	0	True	NA	23	True	AATAAA	-18	NA	143990055	143993415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143990200_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
transcript_13737.known	chr1	+	4019	18	FSM	ENSG00000136636.13	ENST00000259154.9	4019	18	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_14	36.4645156234658	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTTTTCAGTTATTTAAG	3	True	NA	29	True	AATAAA	-15	NA	215567303	215621807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_215567769_215573785_215573840_215574072_215574119_215575900_215575975_215577669_215577729_215578000_215578082_215578999_215579138_215579908_215580000_215586494_215586686_215595355_215595472_215601866_215601955_215602084_215602202_215604131_215604303_215608016_215608173_215611824_215611922_215618885_215619071_215619152_215619292_215620056
transcript_137372.nic	chr8	+	875	3	FSM	ENSG00000204791.11	ENST00000686861.1	869	3	-6	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAACTGTTCCCCCT	NA	False	NA	14	True	ATTAAA	-16	NA	144050522	144051646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144050629_144050794_144050859_144050941
transcript_137374.known	chr8	-	4020	27	FSM	ENSG00000178814.17	ENST00000618853.5	4020	27	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_17	15.4370740244993	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCGTGCTCCGAGTCGTGT	0	True	NA	-7	True	NA	NA	NA	144060692	144051265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144051473_144051728_144051827_144051915_144052077_144052168_144052327_144052448_144052599_144052765_144052901_144052982_144053130_144053208_144053394_144054560_144054736_144054811_144054914_144055028_144055190_144055787_144055940_144056146_144056260_144056384_144056524_144056617_144056756_144056947_144057119_144057207_144057321_144057447_144057714_144057855_144057924_144058009_144058149_144058238_144058405_144058495_144058692_144058772_144058897_144058979_144059080_144059598_144059791_144059861_144060086_144060652
transcript_137375.nic	chr8	+	967	2	FSM	ENSG00000204791.11	ENST00000691496.1	963	2	-4	0	-4	0	multi-exon	FALSE	canonical	3	12	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTCCCCCTCTGTGGGAT	NA	False	NA	23	True	ATTAAA	-25	NA	144050522	144051655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144050629_144050794
transcript_137376.nic	chr8	+	1033	2	NIC	ENSG00000204791.11	novel	869	3	NA	NA	1	0	intron_retention	FALSE	canonical	1	1	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAACTGTTCCCCCT	-1	True	NA	14	True	ATTAAA	-16	NA	144050530	144051646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_144050859_144050941
transcript_137379.known	chr8	-	1264	1	FSM	ENSG00000255224.1	ENST00000524499.1	1264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGCAATCTGGGG	NA	False	NA	NA	False	AATAAA	-14	NA	144079265	144078001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144078000_144079300
transcript_137380.known	chr8	+	842	3	FSM	ENSG00000178896.9	ENST00000316052.6	842	3	0	0	0	0	multi-exon	FALSE	canonical	1	159	junction_1	148.5	2572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCACTGTACGTTATCA	-14	True	NA	13	True	AATAAA	-20	NA	144078671	144080648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144078900_144079942_144080150_144080241
transcript_137381.known	chr8	+	2054	12	FSM	ENSG00000197858.11	ENST00000355091.9	2054	12	0	0	0	0	multi-exon	FALSE	canonical	2	380	junction_8	87.8494203803134	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	-5	True	NA	27	True	AATAAA	-23	NA	144082633	144086216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144082805_144083123_144083304_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_137383.known	chr8	+	1191	7	FSM	ENSG00000179091.5	ENST00000318911.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	3227	junction_3	158.629197256439	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	-3	True	NA	18	True	AATAAA	-18	NA	144095075	144097525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144095229_144095832_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_137384.known	chr8	+	1832	6	FSM	ENSG00000179091.5	ENST00000533444.1	1832	6	0	0	0	0	multi-exon	FALSE	canonical	3	3227	junction_2	153.909843739769	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	-4	True	NA	18	True	AATAAA	-18	NA	144095038	144097525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_137391.known	chr8	-	1348	9	FSM	ENSG00000179526.17	ENST00000398712.7	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_3	72.0120432636097	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-39	True	NA	-6	True	ATTAAA	-16	NA	144103773	144098636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_137393.nic	chr8	-	1365	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_8	186.766189057334	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-34	True	NA	-6	True	ATTAAA	-16	NA	144104262	144098636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_137396.known	chr8	+	1098	8	FSM	ENSG00000179632.10	ENST00000532522.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	313.505850611032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCCTGGCACTGCCC	10	True	NA	NA	False	NA	NA	NA	144104974	144107217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144105150_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106465_144106554_144106675_144106834_144106964_144107087
transcript_137400.nic	chr8	-	1361	8	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	50	0	intron_retention	FALSE	canonical	3	39	junction_7	195.090769036532	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	41	True	NA	-6	True	ATTAAA	-16	NA	144104187	144098636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_144098789_144098865_144098995_144099080_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_137401.known	chr8	-	1687	8	FSM	ENSG00000179526.17	ENST00000359551.6	1687	8	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	169.456032464989	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-9	True	NA	-6	True	ATTAAA	-16	NA	144104237	144098636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144098789_144098865_144098995_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_137403.nic	chr8	-	1240	8	NIC	ENSG00000179526.17	novel	1687	8	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	238.421509781585	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-34	True	NA	-6	True	ATTAAA	-16	NA	144104262	144098636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_144098789_144098865_144098995_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_137405.known	chr8	+	1791	3	FSM	ENSG00000235173.7	ENST00000534255.1	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	3.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGCAGGCATGTGTGGA	963	False	NA	16	True	ATTAAA	-10	NA	144138758	144140713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144139101_144139188_144139312_144139387
transcript_137407.known	chr8	+	1712	12	FSM	ENSG00000179832.18	ENST00000423230.6	1712	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	25.4353823970852	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	-1	True	NA	7	True	AATAAA	-17	NA	144148035	144213467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
transcript_13741.nnic	chr1	-	893	6	NNC	ENSG00000042781.14	novel	18938	72	NA	NA	-56512	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	1.74355957741627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTTAATTGGGGTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	216145651	216083379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_216083587_216084697_216084878_216086718_216086821_216089012_216089140_216097082_216097214_216145505
transcript_137411.known	chr8	+	2134	13	FSM	ENSG00000185122.11	ENST00000528838.6	2134	13	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_9	106.250065359457	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCATGTGTTTCC	4	True	NA	20	True	TATAAA	-17	NA	144291603	144314720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314124
transcript_137413.nic	chr8	-	621	3	ISM	ENSG00000185000.12	ENST00000524965.5	1336	12	1535	0	444	0	3prime_fragment	FALSE	canonical	3	189	junction_1	6	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGTCAATAAAGTGCT	9756	False	NA	-43	True	NA	NA	NA	144317189	144316319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_144316710_144316852_144316916_144317021
transcript_137417.nnic	chr8	+	1759	5	NIC	ENSG00000185803.12	novel	2104	6	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	229.793929423734	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	NA	False	NA	28	True	AATAAA	-15	NA	144354636	144361272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_144354691_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_137419.known	chr8	+	1757	5	FSM	ENSG00000185803.12	ENST00000530047.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	203.418749135865	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGCATTAATTCT	3907	False	NA	26	True	AATAAA	-13	NA	144358556	144361270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144358611_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_137420.known	chr8	+	1247	5	FSM	ENSG00000185803.12	ENST00000526338.7	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	249.031499011671	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	-23	True	NA	28	True	AATAAA	-15	NA	144358576	144361272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144358611_144359183_144359424_144360114_144360494_144360589_144360714_144360802
transcript_137421.known	chr8	+	2158	5	FSM	ENSG00000185803.12	ENST00000643944.2	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	30.8747469625259	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	13	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144359066_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_137424.known	chr8	+	2104	6	FSM	ENSG00000185803.12	ENST00000532815.2	2104	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.856114032362	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	-6	True	NA	28	True	AATAAA	-15	NA	144354643	144361272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144354691_144357250_144357603_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_137425.known	chr8	+	1690	4	FSM	ENSG00000185803.12	ENST00000675787.1	1690	4	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	239.240929237081	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	197	False	NA	28	True	AATAAA	-15	NA	144359187	144361272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144359424_144359622_144360494_144360600_144360714_144360802
transcript_137426.known	chr8	-	4480	38	FSM	ENSG00000071894.17	ENST00000616140.2	4480	38	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_37	85.7316809021	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTGTGTGGTCATTAC	-24	True	NA	-4	True	AAAACA	-25	NA	144409335	144393230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014_144409173_144409288
transcript_13743.nnic	chr1	+	636	2	Antisense	novelGene_ENSG00000042781.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	1	True	NA	NA	False	AATAAA	-22	NA	216008447	216013833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_216008702_216013451
transcript_137431.known	chr8	+	1960	15	FSM	ENSG00000173137.12	ENST00000308860.11	1960	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	13.9855975480317	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	-9	True	NA	NA	False	NA	NA	NA	144374046	144393242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391782_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_137433.nnic	chr8	+	1955	15	NNC	ENSG00000173137.12	novel	1960	15	NA	NA	-26	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_8	20.1059692628831	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	929	False	NA	NA	False	NA	NA	NA	144374015	144393242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391818_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_137438.known	chr8	+	2027	14	FSM	ENSG00000173137.12	ENST00000529654.5	2027	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	18.6068003093353	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	-10	True	NA	NA	False	NA	NA	NA	144374045	144393242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390860_144391057_144391133_144391275_144391360_144391475_144391579_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_137440.known	chr8	-	2123	12	FSM	ENSG00000147804.10	ENST00000301305.8	2123	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	7.45897872609673	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	0	True	NA	-1	True	AGTAAA	-19	NA	144416844	144412413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512_144413568_144413749_144413882_144413957_144414096_144414261_144414435_144414724_144414897_144414973_144415111_144415226_144415420_144415809_144416092_144416597
transcript_137441.known	chr8	-	668	4	FSM	ENSG00000147804.10	ENST00000532718.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	2.62466929133727	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	4	True	NA	-1	True	AGTAAA	-19	NA	144413586	144412413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512
transcript_137442.known	chr8	-	498	3	FSM	ENSG00000147804.10	ENST00000530807.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	21	True	NA	-1	True	AGTAAA	-19	NA	144413569	144412413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412667_144412758_144412947_144413512
transcript_137443.known	chr8	-	2778	3	FSM	ENSG00000147804.10	ENST00000529462.5	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACATGTTTCTGTGAG	5	True	NA	NA	False	ATTAAA	-13	NA	144413585	144410394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412947_144413236_144413390_144413512
transcript_137444.known	chr8	-	795	3	FSM	ENSG00000147804.10	ENST00000531013.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGCTGTGCTCTCCTT	-1	True	NA	-2	True	AGTAAA	-18	NA	144413591	144412414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412667_144412758_144412947_144413236
transcript_13745.known	chr1	-	626	4	FSM	ENSG00000042781.14	ENST00000481786.1	626	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGGTTTCTTTACAAATT	NA	False	NA	NA	False	AATAAA	-28	NA	216089139	216083369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_216083587_216084697_216084878_216086718_216086821_216089012
transcript_137452.known	chr8	-	948	10	FSM	ENSG00000160948.14	ENST00000292510.6	948	10	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_9	55.8518764122158	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-20	True	NA	-25	True	AATAAA	-18	NA	144428548	144423616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_137453.known	chr8	-	892	9	FSM	ENSG00000160948.14	ENST00000526054.5	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_5	18.7078693335184	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-9	True	NA	-25	True	AATAAA	-18	NA	144426983	144423616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_137454.known	chr8	-	1010	8	FSM	ENSG00000160948.14	ENST00000529182.5	1010	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_4	19.921273625377	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-9	True	NA	-25	True	AATAAA	-18	NA	144426983	144423616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_137455.known	chr8	-	1613	8	FSM	ENSG00000160948.14	ENST00000530836.5	1613	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	131.068139312562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCGACCTTCCTGCTT	-9	True	NA	-39	True	AATAAA	-4	NA	144426983	144423630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425773_144425921_144426064_144426179_144426209_144426908
transcript_137456.known	chr8	-	573	9	FSM	ENSG00000160948.14	ENST00000531032.5	573	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	58.6024743504914	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGCACCGCATGAGC	-15	True	NA	NA	False	NA	NA	NA	144428543	144424104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_137457.known	chr8	-	4531	26	FSM	ENSG00000160949.18	ENST00000409379.8	4531	26	0	0	0	0	multi-exon	FALSE	canonical	1	85	junction_10	61.7203499666034	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCCCTCCCCGTGGCTG	-11	True	NA	-8	True	AATAAA	-15	NA	144444440	144428774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144429337_144430403_144430538_144431077_144431152_144432284_144432461_144433587_144433760_144433977_144434280_144434810_144434890_144435016_144435171_144435473_144435551_144435657_144436419_144436557_144436682_144436756_144436921_144437026_144437100_144438470_144438561_144438652_144438736_144440020_144440211_144440350_144440477_144440717_144440871_144440965_144441112_144442036_144442152_144442240_144442413_144442676_144442807_144443137_144443322_144443881_144444025_144444179_144444276_144444389
transcript_13746.known	chr1	-	5195	7	FSM	ENSG00000196482.18	ENST00000408911.8	5195	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTTTTGTATTGTGTT	-6	True	NA	-6	True	ATTAAA	-18	NA	216723429	216503250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_216507184_216519151_216519422_216564218_216564381_216567987_216568099_216650972_216651090_216677075_216677492_216723243
transcript_137460.known	chr8	-	853	3	FSM	ENSG00000187954.13	ENST00000533764.5	853	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	66	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGGGTGTGGCAGGCC	-9	True	NA	NA	False	NA	NA	NA	144465434	144464274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144464613_144464808_144465097_144465207
transcript_137461.known	chr8	-	1216	3	FSM	ENSG00000187954.13	ENST00000306145.10	1216	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	19	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAAACTGCCCATTTTT	-67	True	NA	-14	True	AATAAA	-21	NA	144465492	144463824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144464613_144464808_144465097_144465352
transcript_137462.known	chr8	-	581	3	FSM	ENSG00000187954.13	ENST00000530637.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	53.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGCTGCCACCACCA	17	True	NA	NA	False	GGGGCT	-21	NA	144465667	144464577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144464613_144464808_144465097_144465409
transcript_137463.known	chr8	-	1162	3	FSM	ENSG00000187954.13	ENST00000424149.6	1162	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	62.5	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCATTTTTGAGAGGGA	10004	False	NA	-6	True	AATAAA	-29	NA	144465648	144463816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144464613_144464808_144465097_144465570
transcript_137473.known	chr8	-	492	3	FSM	ENSG00000160973.8	ENST00000525197.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	433.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCCAGTCCCCCGCCA	10	True	NA	NA	False	NA	NA	NA	144475823	144474872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144475057_144475156_144475224_144475582
transcript_137476.known	chr8	-	2017	3	FSM	ENSG00000160973.8	ENST00000377317.5	2017	3	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_2	87.5	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCAGGGCCGCGACCCAG	-16	True	NA	NA	False	NA	NA	NA	144475849	144473411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144475057_144475156_144475262_144475582
transcript_137479.known	chr8	+	807	2	FSM	ENSG00000160972.10	ENST00000528430.2	807	2	0	0	0	0	multi-exon	TRUE	canonical	3	193	junction_1	0	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	4630	False	NA	11	True	GATAAA	-18	NA	144501088	144502120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144501295_144501519
transcript_13748.known	chr1	-	5859	10	FSM	ENSG00000092978.11	ENST00000366935.8	5859	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	21.6715094303017	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTAAAGTTGTCAAAAT	-21	True	NA	NA	False	ATTAAA	-22	NA	217631090	217426991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_217431366_217449248_217449338_217491679_217491751_217498355_217498396_217514821_217514890_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_137483.known	chr8	+	1552	5	FSM	ENSG00000167700.9	ENST00000301327.5	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	46.6851154009498	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGTGCCTGGAATAT	-11	True	NA	32	True	AATAAA	-24	NA	144509069	144511213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144510016_144510359_144510508_144510597_144510723_144510793_144510904_144510990
transcript_137488.known	chr8	+	5337	4	FSM	ENSG00000160959.8	ENST00000292524.6	5337	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	56.1505911713215	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACATTTTCTTAAAGC	-5	True	NA	35	True	AATAAA	-23	NA	144517991	144525172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144518042_144519614_144520055_144520237_144520823_144520910
transcript_137489.nic	chr8	+	2115	4	NIC	ENSG00000160959.8	novel	2243	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	57.092517509351	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGCTGTTTTTTTTTC	-17	True	NA	33	True	NA	NA	NA	144517979	144522024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_144518042_144519700_144520055_144520237_144520823_144520910
transcript_137491.known	chr8	-	2953	5	FSM	ENSG00000198169.9	ENST00000292562.12	2953	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	26.6176633084123	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTTGGGCTTTGACA	-51	True	NA	-6	True	AATAAA	-20	NA	144755531	144720908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144723383_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_137495.nnic	chr8	-	1279	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-89	15458	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	37.157603528753	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGGTGGTAACAGTGTC	5820	False	NA	NA	False	AATAAA	-17	NA	144755620	144737995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_144738707_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_137497.nnic	chr8	-	838	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-89	6687	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	38.111678000319	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAACAACTCTGTGCCCA	5820	False	NA	NA	False	AATAAA	-9	NA	144755620	144746766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_144747037_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_137499.nnic	chr8	-	786	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-89	1543	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	34.1421660121323	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAATTCCATCCTTCT	5820	False	NA	NA	False	AATATA	-17	NA	144755620	144751910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_144752129_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_137502.known	chr8	-	618	4	FSM	ENSG00000198169.9	ENST00000525191.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	29.4882274061286	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTTGGTGATTTAC	39	True	NA	0	True	AATATA	-22	NA	144755441	144753453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144753797_144754191_144754322_144754695_144754804_144755404
transcript_137507.known	chr8	-	1901	6	FSM	ENSG00000196378.13	ENST00000343459.8	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	25.4982352330509	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCATGTTCATTTTAG	-4	True	NA	0	True	ATTAAA	-25	NA	144787304	144773113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_137508.known	chr8	-	582	5	FSM	ENSG00000196378.13	ENST00000534445.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	32.4384031666172	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGAGCAAAGTTTTGAA	6195	False	NA	NA	False	NA	NA	NA	144787345	144774353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144774606_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_137518.known	chr8	-	556	4	FSM	ENSG00000161016.18	ENST00000529163.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	1	94	junction_3	14144.44082395	7290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCCACCCCCATG	14	True	NA	-16	True	AATAAA	-19	NA	144792390	144789766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144792365
transcript_137520.known	chr8	-	965	6	FSM	ENSG00000161016.18	ENST00000394920.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_5	10634.3584592584	28157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	15	True	NA	-18	True	AATAAA	-17	NA	144792389	144789768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
transcript_137521.known	chr8	-	876	6	FSM	ENSG00000161016.18	ENST00000529920.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	2	75	junction_2	12835.9019098776	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGGCCTCAATAAAGTT	1397	False	NA	-51	True	NA	NA	NA	144792143	144789801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144790677_144790764_144791276_144791496_144791772_144791915_144791991
transcript_137522.known	chr8	-	540	5	FSM	ENSG00000161016.18	ENST00000528296.5	540	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12287.3903250446	6537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	1415	False	NA	-18	True	AATAAA	-17	NA	144792125	144789768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791308_144791849_144791915_144791991
transcript_137523.known	chr8	-	717	4	FSM	ENSG00000161016.18	ENST00000526668.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	14646	junction_2	9163.97297391621	7822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGCCCACCCCCAT	1581	False	NA	-17	True	AATAAA	-18	NA	144791959	144789767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772
transcript_137524.known	chr8	-	698	5	FSM	ENSG00000161016.18	ENST00000531975.5	698	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	12284.5377482224	7934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCCACCCCCATGG	1483	False	NA	-15	True	AATAAA	-20	NA	144792057	144789765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791873_144791991
transcript_137525.known	chr8	-	730	6	FSM	ENSG00000161016.18	ENST00000533397.5	730	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10996.4429812553	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTGCTGAGGGCCTCAA	1387	False	NA	-58	True	NA	NA	NA	144792153	144789808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791308_144791370_144791496_144791772_144791915_144791991
transcript_137526.known	chr8	-	745	5	FSM	ENSG00000161016.18	ENST00000532702.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	6847.42086482202	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAACCCAGAAATGCA	20	True	NA	NA	False	NA	NA	NA	144792384	144790354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792265
transcript_137527.known	chr8	-	551	5	FSM	ENSG00000161016.18	ENST00000527914.5	551	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12835.2019462103	6660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-19	True	NA	-18	True	AATAAA	-17	NA	144792423	144789768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791311_144791991_144792141_144792365
transcript_137532.nnic	chr8	+	561	5	NNC	ENSG00000197363.11	novel	3238	5	NA	NA	-16	-200	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1.92028643696715	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGTTCGTTTGTGAGT	6290	False	NA	NA	False	AATAAA	-18	NA	144798859	144807127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_144798938_144802869_144802948_144803640_144803768_144804124_144804239_144806963
transcript_137534.nnic	chr8	+	540	5	NNC	ENSG00000197363.11	novel	456	5	NA	NA	-16	-200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.20156211871642	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGTTCGTTTGTGAGT	6290	False	NA	NA	False	AATAAA	-18	NA	144798859	144807127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_144798938_144802869_144802948_144803640_144803768_144804145_144804239_144806963
transcript_137536.nnic	chr8	+	434	4	NNC	ENSG00000197363.11	novel	720	5	NA	NA	-16	-200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.68178700572909	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGTTCGTTTGTGAGT	6290	False	NA	NA	False	AATAAA	-18	NA	144798859	144807127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_144798938_144802869_144802948_144804124_144804239_144806963
transcript_137539.known	chr8	-	1430	2	FSM	ENSG00000170619.10	ENST00000305103.4	1430	2	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	0	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCATCAGAGGATGGCG	-12	True	NA	-13	True	AATAAA	-20	NA	144853048	144850175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144852838
transcript_137540.known	chr8	-	849	2	FSM	ENSG00000170619.10	ENST00000529143.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCGAGCGTCCTGATG	897	False	NA	NA	False	NA	NA	NA	144852657	144850824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144852379
transcript_137542.known	chr8	-	1573	2	FSM	ENSG00000170619.10	ENST00000450361.2	1573	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACTGGAATAGCTCAT	NA	False	NA	-25	True	AATAAA	-8	NA	144853736	144850187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144853371
transcript_137543.known	chr8	-	848	2	FSM	ENSG00000170619.10	ENST00000533270.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCCGAGCGTCCTGAT	33	True	NA	NA	False	NA	NA	NA	144853003	144850825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144852725
transcript_137544.known	chr8	+	2125	4	FSM	ENSG00000147789.16	ENST00000544249.2	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	38.0555150040335	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	NA	False	NA	23	True	AATAAA	-19	NA	144827517	144843222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144827610_144829042_144829091_144837390_144837508_144841354
transcript_137545.known	chr8	+	1134	4	FSM	ENSG00000147789.16	ENST00000528130.1	1134	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.6445694888204	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATGGTGTGAGCCCAG	1194	False	NA	NA	False	NA	NA	NA	144829041	144838848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144829091_144829477_144829605_144837390_144837508_144838007
transcript_137546.known	chr8	-	1305	2	FSM	ENSG00000170619.10	ENST00000402718.4	1305	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCGTGTGATGCAG	-31	True	NA	-3	True	AATAAA	-30	NA	144853067	144850165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144852992
transcript_137547.known	chr8	-	592	7	FSM	ENSG00000196150.14	ENST00000525694.5	592	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.0905835963691	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAACACCCTTGGGGAG	24	True	NA	NA	False	NA	NA	NA	144901423	144882759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144895142_144895233_144901398
transcript_137548.known	chr8	-	6337	6	FSM	ENSG00000196150.14	ENST00000417550.7	6337	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	15.3022874107109	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTGCAGTGAAGAA	-6	True	NA	NA	False	AATAAA	-17	NA	144901453	144876954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_137549.known	chr8	-	672	6	FSM	ENSG00000196150.14	ENST00000533622.5	672	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	26.4302856586909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGCATGCCACTCACTCC	21	True	NA	NA	False	NA	NA	NA	144901426	144882654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901336
transcript_137559.known	chr8	-	593	5	FSM	ENSG00000196150.14	ENST00000533221.5	593	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	27.5352047386614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACATGTGTGTTGAGTGT	24	True	NA	NA	False	NA	NA	NA	144901423	144882605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144882837_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_13756.known	chr1	-	3218	6	FSM	ENSG00000092978.11	ENST00000366934.3	3218	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	11.7200682591869	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCAATTTGTGCTGCT	-13	True	NA	-7	True	AATAAA	-27	NA	217631082	217608183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_217610193_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_137561.nic	chr8	-	753	5	ISM	ENSG00000196150.14	ENST00000533622.5	672	6	-17	3939	10	3093	5prime_fragment	FALSE	canonical	3	7	junction_4	28.5252081499855	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	4	True	NA	-2	True	ATTAAA	-18	NA	144901443	144886593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901336
transcript_137562.nic	chr8	-	725	5	ISM	ENSG00000196150.14	ENST00000417550.7	6337	6	-24	9639	2	3093	5prime_fragment	FALSE	canonical	3	52	junction_4	11.4127122105133	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-30	True	NA	-2	True	ATTAAA	-18	NA	144901477	144886593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_137564.nnic	chr8	-	1633	5	NNC	ENSG00000196150.14	novel	6337	6	NA	NA	2	3093	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	27.9329554469268	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-30	True	NA	-2	True	ATTAAA	-18	NA	144901477	144886593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_144887811_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_137567.known	chr8	-	568	3	FSM	ENSG00000170631.15	ENST00000527512.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	25.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTCTCCCAGGAGGGG	-26	True	NA	NA	False	NA	NA	NA	144950875	144932404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144932591_144945912_144946216_144950796
transcript_137568.known	chr8	-	696	3	FSM	ENSG00000170631.15	ENST00000532351.5	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTATTCAGCGTCAA	30	True	NA	NA	False	NA	NA	NA	144950819	144932122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144932591_144946010_144946216_144950796
transcript_137570.known	chr8	-	2206	2	FSM	ENSG00000170631.15	ENST00000527427.1	2206	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAGAAAAA	-26	True	NA	NA	False	NA	NA	NA	144950875	144944088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144946216_144950796
transcript_137572.known	chr8	-	876	5	FSM	ENSG00000196922.11	ENST00000690545.1	2085	5	9	1200	0	-385	multi-exon	FALSE	canonical	1	4	junction_2	7.17635004720366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAAGAGCCTATCAGA	1	True	NA	NA	False	NA	NA	NA	145002895	144978138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144978554_144994478_144994593_144996506_144996608_144999602_144999770_145002816
transcript_137577.known	chr8	-	599	4	FSM	ENSG00000196922.11	ENST00000528392.6	1980	4	17	1364	0	-561	multi-exon	FALSE	canonical	2	9	junction_2	5.8878405775519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCTCTAGAGAGAATGG	1	True	NA	NA	False	NA	NA	NA	145002895	144978314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144978554_144994478_144994593_144999602_144999770_145002816
transcript_137581.known	chr8	-	575	4	FSM	ENSG00000196922.11	ENST00000529315.2	575	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.48528137423857	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAGAAGATACATGCAA	15	False	NA	NA	False	TATAAA	-19	NA	145002881	144996451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144996608_144999602_144999770_145000351_145000539_145002816
transcript_137584.known	chr8	-	1112	3	FSM	ENSG00000196922.11	ENST00000534037.7	1136	3	20	4	6	-4	multi-exon	FALSE	canonical	3	18	junction_1	2.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTTGGGTGTAGGT	-16	True	NA	NA	False	ATTAAA	-14	NA	145002875	144995721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144996608_144999602_144999770_145002816
transcript_137585.known	chr8	-	5210	3	FSM	ENSG00000196922.11	ENST00000426361.6	5210	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGCCCATTTTCATGTA	2	True	NA	-1	True	ATTAAA	-20	NA	145002894	144973588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144978554_144999602_144999770_145002816
transcript_137589.known	chr8	+	2588	5	FSM	ENSG00000182307.14	ENST00000331434.7	2588	5	0	0	0	0	multi-exon	FALSE	canonical	1	228	junction_2	185.038509505454	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	-3	True	NA	26	True	NA	NA	NA	145052466	145056030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_145052498_145052585_145052898_145053061_145053147_145053296_145053444_145054017
transcript_137595.nic	chr8	+	313	2	ISM	ENSG00000182307.14	ENST00000331434.7	2588	5	-73	3236	-71	-643	5prime_fragment	FALSE	canonical	3	299	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATAAGAAGAAAACGCGGA	537	False	NA	NA	False	AAAACA	-4	NA	145052393	145052794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_145052498_145052585
transcript_137596.known	chr8	+	2676	4	FSM	ENSG00000182307.14	ENST00000530455.5	2676	4	0	0	0	0	multi-exon	FALSE	canonical	1	228	junction_1	189.6915625137	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	-3	True	NA	26	True	NA	NA	NA	145052466	145056030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_145052898_145053061_145053147_145053296_145053444_145054017
transcript_137597.known	chr9	-	1873	11	FSM	ENSG00000181404.17	ENST00000442898.5	1873	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	76.2627038597505	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAACGTCTCGGGGTCAG	NA	False	NA	40	True	AATAAA	-21	NA	29739	14474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14941_15080_15150_15908_16062_16717_16877_16964_17167_17343_17480_17718_17856_18027_18175_18380_18493_24850_25005_29601
transcript_137613.known	chr9	-	1807	4	FSM	ENSG00000172785.18	ENST00000382389.5	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	698.90978594443	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	31	False	NA	NA	False	ATTAAA	-39	NA	179023	171952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_173367_175697_175785_177722_177821_178815
transcript_137614.known	chr9	-	1771	16	FSM	ENSG00000172785.18	ENST00000314367.14	1771	16	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_15	489.133583208332	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTATGACTGTTATT	7	False	NA	NA	False	ATTAAA	-44	NA	179047	121059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
transcript_137615.known	chr9	-	1792	15	FSM	ENSG00000172785.18	ENST00000377400.8	1792	15	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_8	397.077152838239	3071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGATGTTGACGACC	NA	False	NA	NA	False	AATAAA	-17	NA	179147	121040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_137616.known	chr9	-	1241	14	FSM	ENSG00000172785.18	ENST00000382447.8	1241	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	516.201958092433	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	33	False	NA	-6	True	AATAAA	-20	NA	179021	121408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_137617.known	chr9	-	2513	8	FSM	ENSG00000172785.18	ENST00000377447.7	2513	8	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	405.0420487116	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAGATTTAAGAATT	29	False	NA	NA	False	NA	NA	NA	179025	152913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_137623.known	chr9	+	5070	12	FSM	ENSG00000107104.21	ENST00000382297.7	5070	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	28.0035416886407	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCCCTGTTTCAT	-13	True	NA	15	True	AATAAA	-16	NA	504694	746103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_504755_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_137628.nnic	chr9	+	762	5	NIC	ENSG00000107104.21	novel	2232	5	NA	NA	-31	53	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9.20597631976098	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTCTGATCTTTTCTT	NA	False	NA	10	True	AATAAA	-21	NA	470259	475518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_470375_470555_470678_471448_471587_473193_473274_475211
transcript_13763.nic	chr1	-	775	2	ISM	ENSG00000092978.11	ENST00000366934.3	3218	6	-26	11734	-18	-11734	5prime_fragment	FALSE	canonical	3	71	junction_1	0	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATAATCAGACAAG	NA	False	NA	-91	True	AAAAAG	-4	NA	217631108	217619917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_217620500_217630915
transcript_137634.nnic	chr9	+	629	4	NIC	ENSG00000107104.21	novel	5581	16	NA	NA	-31	53	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	7.1336448530109	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGCTCTGATCTTTTCTT	NA	False	NA	10	True	AATAAA	-21	NA	470259	475518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_470375_470555_470683_473193_473274_475211
transcript_137636.nnic	chr9	+	676	4	NIC	ENSG00000107104.21	novel	5097	13	NA	NA	0	-1	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	9.93310961716756	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGGAGGACAGTTTTTT	-13	True	NA	3	True	AATAAA	-13	NA	504694	549527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_504755_539515_539634_540507_540668_549189
transcript_137648.known	chr9	+	5688	13	NIC	ENSG00000107104.21	novel	5070	12	NA	NA	0	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	81.3319672016415	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTCCCTGTTTCATCTC	-13	True	NA	18	True	AATAAA	-19	NA	504694	746106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_504755_549106_549722_676889_677010_710803_713465_730050_730249_731157_731267_732377_732618_734747_734836_738284_738505_740791_740935_742204_742406_744490_744590_745172
transcript_137649.known	chr9	+	674	1	FSM	ENSG00000235330.2	ENST00000598100.1	674	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGTCTGCATGAGTGC	7405	False	NA	NA	False	AATAAA	-44	NA	477749	478423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_477700_478400
transcript_13765.nic	chr1	+	1416	11	NIC	ENSG00000162814.11	novel	5798	11	NA	NA	0	17	combination_of_known_junctions	TRUE	canonical	1	3	junction_6	1.73205080756888	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAATTAATTATTGTG	-1	True	NA	NA	False	AATAAA	-22	NA	217631323	217867150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_217631447_217648881_217648972_217651096_217651179_217669032_217669084_217683257_217683362_217741974_217742099_217774333_217774538_217782173_217782323_217801717_217801851_217862773_217862857_217866877
transcript_137655.known	chr9	+	1781	7	FSM	ENSG00000080503.24	ENST00000324954.10	1781	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.1974980567743	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	20	False	NA	17	True	AATAAA	-18	NA	2157682	2193574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_2157891_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
transcript_137656.nic	chr9	+	1689	7	ISM	ENSG00000080503.24	ENST00000302401.8	2242	8	1338	50	15	0	3prime_fragment	FALSE	canonical	2	6	junction_1	28.5345794120436	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	1301	False	NA	17	True	AATAAA	-18	NA	2159793	2193574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_2159910_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
transcript_137658.nic	chr9	+	1948	7	ISM	ENSG00000080503.24	ENST00000635590.1	1843	9	2208	-3	48	0	3prime_fragment	FALSE	canonical	2	3	junction_1	29.3565249230142	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	795	False	NA	17	True	AATAAA	-18	NA	2160660	2193574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_2161036_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
transcript_13766.known	chr1	+	5798	11	FSM	ENSG00000162814.11	ENST00000366933.5	5798	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	1.86815416922694	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCGTCTCTGAGCTTAT	-15	True	NA	NA	False	ATTAAA	-15	NA	217631343	217871696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_217631447_217648881_217648972_217651096_217651179_217669032_217669084_217683257_217683362_217741974_217742099_217774333_217774538_217782173_217782323_217801717_217801851_217862773_217862857_217867021
transcript_137660.nnic	chr9	+	1449	6	NNC	ENSG00000080503.24	novel	291	3	NA	NA	-334	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	31.1036975293935	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	4694	False	NA	17	True	AATAAA	-18	NA	2180898	2193574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_2180993_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
transcript_137662.nic	chr9	+	1575	4	ISM	ENSG00000080503.24	ENST00000635273.1	672	6	582	-778	244	0	3prime_fragment	FALSE	canonical	3	41	junction_2	23.6971634495683	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	236	False	NA	17	True	AATAAA	-18	NA	2181814	2193574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_2182243_2186095_2186229_2191265_2191409_2192703
transcript_137664.nnic	chr9	-	1693	3	Antisense	novelGene_ENSG00000080503.24_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	10.5	26	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTATCTTACTTCAAT	NA	False	NA	NA	False	AATAAA	-26	NA	2200549	2177350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_-_2178221_2180836_2181023_2199912
transcript_137687.nnic	chr9	-	863	5	NNC	ENSG00000236404.12	novel	806	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.4420050587701	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-14	True	NA	0	True	AATAAA	-25	NA	2621415	2535651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_2536016_2536358_2536454_2539147_2539211_2539398_2539553_2621228
transcript_137692.nnic	chr9	-	1107	4	NNC	ENSG00000236404.12	novel	806	4	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11.7284080571728	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	508	False	NA	0	True	AATAAA	-25	NA	2621471	2535651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_2536016_2536358_2536454_2539147_2539553_2621228
transcript_137693.nnic	chr9	-	1115	4	NNC	ENSG00000236404.12	novel	746	4	NA	NA	334	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	10.6144555520604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	NA	False	NA	0	True	AATAAA	-25	NA	2622039	2535651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_2536016_2536358_2536454_2539147_2539553_2621788
transcript_137695.nic	chr9	-	856	4	FSM	ENSG00000236404.12	ENST00000691704.1	806	4	-50	0	-50	0	multi-exon	FALSE	canonical	3	25	junction_2	2.62466929133727	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	508	False	NA	0	True	AATAAA	-25	NA	2621471	2535651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2621228
transcript_137696.nnic	chr9	-	864	4	NNC	ENSG00000236404.12	novel	746	4	NA	NA	334	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	10.6144555520604	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	NA	False	NA	0	True	AATAAA	-25	NA	2622039	2535651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_2536016_2536358_2536454_2539398_2539553_2621788
transcript_137697.known	chr9	-	887	4	FSM	ENSG00000236404.12	ENST00000453601.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	10.6144555520604	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	NA	False	NA	0	True	AATAAA	-25	NA	2622373	2535651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2622099
transcript_137701.nnic	chr9	-	652	3	NIC	ENSG00000236404.12	novel	806	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-20	True	NA	0	True	AATAAA	-25	NA	2621421	2535651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_2536016_2536358_2536454_2621228
transcript_137702.nic	chr9	-	1844	2	ISM	ENSG00000236404.12	ENST00000691704.1	806	4	-50	2300	-50	-2300	5prime_fragment	FALSE	canonical	3	31	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTTGTTGATTGAGTC	508	False	NA	-3	True	AATAAA	-19	NA	2621471	2537951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_2539553_2621228
transcript_137704.nnic	chr9	-	544	4	NNC	ENSG00000286670.1	novel	1100	2	NA	NA	-77729	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.05480466765633	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTTCATGTTCTTGT	-1	True	NA	NA	False	NA	NA	NA	2732100	2652853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_2653011_2664968_2665076_2667937_2668062_2731944
transcript_137715.known	chr9	-	2187	18	FSM	ENSG00000080608.10	ENST00000397885.3	2187	18	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_9	45.8259079651506	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCTGTCTCCTCTGTT	-7	True	NA	-20	True	TATAAA	-30	NA	2844095	2804151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_2804464_2807813_2807905_2810343_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_137734.nic	chr9	-	720	5	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-196	29258	-196	-4935	5prime_fragment	FALSE	canonical	3	779	junction_2	37.0236410959268	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAAAGTTAATGAGTGAT	NA	False	NA	NA	False	AAGAAA	-4	NA	2844291	2833409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_137738.nic	chr9	-	611	4	ISM	ENSG00000080608.10	ENST00000397885.3	2187	18	-196	29965	-196	-5642	5prime_fragment	FALSE	canonical	3	779	junction_1	42.4578222082418	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTGAAGCAAAGCAGACA	NA	False	NA	-86	True	AAAAAG	-10	NA	2844291	2834116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_2834167_2837179_2837402_2838425_2838518_2844044
transcript_137743.known	chr9	+	2178	2	FSM	ENSG00000168263.9	ENST00000382082.4	2178	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGACTTGAGAAAATTTTT	-4	True	NA	9	True	AATAAA	-16	NA	2717509	2730037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_2719096_2729445
transcript_137745.known	chr9	-	9258	17	FSM	ENSG00000080298.16	ENST00000617270.5	9258	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_16	6.77195503529077	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGAAATGGCTTGGGTT	-9	True	NA	NA	False	AATAAA	-22	NA	3526001	3218296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_3225281_3228846_3228890_3248031_3248186_3256990_3257200_3262934_3263085_3266207_3266306_3270370_3270526_3271002_3271119_3275499_3275613_3277339_3277462_3288130_3288251_3293076_3293259_3301545_3301621_3330258_3330518_3346666_3346765_3395471_3395597_3525746
transcript_137754.nnic	chr9	-	988	3	NNC	ENSG00000080298.16	novel	9307	18	NA	NA	-7	-133688	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTCTAGCAG	-19	True	NA	NA	False	AATAAA	-21	NA	3526011	3478419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_3479105_3479880_3479919_3525746
transcript_137755.nnic	chr9	-	1129	2	NNC	ENSG00000080298.16	novel	9307	18	NA	NA	-22	-178181	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGCTTTAACCTGGA	883	False	NA	-2	True	AATAAA	-19	NA	3526026	3522912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_3523762_3525746
transcript_137759.nnic	chr9	+	967	2	NNC	ENSG00000237009.2	novel	734	2	NA	NA	-84692	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	87	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGCCTGTCTGGGTAGTC	NA	False	NA	23	True	AATAAA	-18	NA	3813949	3901248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_3814501_3900832
transcript_137762.known	chr9	-	895	7	FSM	ENSG00000106686.17	ENST00000223517.9	895	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.62476052848859	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCCAGCTCAGTTGAAC	33	True	NA	NA	False	NA	NA	NA	4666423	4625403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4625567_4626425_4626556_4629090_4629169_4635274_4635400_4656040_4656090_4661898_4662037_4666211
transcript_137766.nnic	chr9	-	628	5	NNC	ENSG00000106686.17	novel	2437	13	NA	NA	47	-8295	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	3.76662979332984	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGTGATCCTATTC	NA	False	NA	NA	False	AATAAA	-21	NA	4666619	4654593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4654805_4656040_4656090_4661898_4662037_4666211_4666257_4666434
transcript_137767.nnic	chr9	-	2813	4	NNC	ENSG00000106686.17	novel	3904	12	NA	NA	60043	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2.94392028877595	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCATCTGTCTTGCTTCA	9114	False	NA	NA	False	ATTAAA	-15	NA	4606264	4598315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4600810_4604178_4604270_4605346_4605441_4606130
transcript_137769.nnic	chr9	-	730	4	NNC	ENSG00000106686.17	novel	1444	11	NA	NA	59832	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2.94392028877595	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGTCAAGCTGGAAA	8903	False	NA	-17	True	ATTAAA	-25	NA	4606475	4600609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4600810_4604178_4604270_4605346_4605441_4606130
transcript_137772.nnic	chr9	-	619	4	NNC	ENSG00000106686.17	novel	2437	13	NA	NA	4	-8295	intron_retention	FALSE	canonical	2	3	junction_1	3.29983164553722	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGTGATCCTATTC	24	True	NA	NA	False	AATAAA	-21	NA	4666432	4654593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4654805_4656040_4656090_4661898_4662037_4666211
transcript_137776.known	chr9	+	2965	1	FSM	ENSG00000205808.7	ENST00000381883.5	2965	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGAGATGAAAACTTG	-20	True	NA	14	True	AATAAA	-20	NA	4662293	4665258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_4662300_4665300
transcript_137785.nnic	chr9	-	543	3	NNC	ENSG00000273061.2	novel	256	2	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	5434	False	NA	-5	True	AATAAA	-15	NA	4679615	4676599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4676750_4679001_4679166_4679386
transcript_137789.nnic	chr9	-	389	2	NNC	ENSG00000273061.2	novel	256	2	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	5502	False	NA	-5	True	AATAAA	-15	NA	4679547	4676599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4676750_4679308
transcript_137790.known	chr9	-	235	2	FSM	ENSG00000273061.2	ENST00000609131.2	256	2	21	0	21	0	multi-exon	FALSE	canonical	3	28	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	-11	True	NA	-5	True	AATAAA	-15	NA	4679471	4676599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4676750_4679386
transcript_137791.known	chr9	-	463	2	FSM	ENSG00000273061.2	ENST00000607997.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCATGTGTTTAGA	5547	False	NA	NA	False	AATAAA	-16	NA	4679502	4678818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4679166_4679386
transcript_137792.known	chr9	+	3500	7	FSM	ENSG00000106993.12	ENST00000381854.4	3500	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	20.5216687647201	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCATTTATTCTCT	-18	True	NA	14	True	AATAAA	-18	NA	4679568	4708399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863_4702029_4706010
transcript_137795.known	chr9	-	4219	5	FSM	ENSG00000147853.17	ENST00000381809.8	4219	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	23.4200768572607	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	-6	True	NA	-7	True	AATAAA	-21	NA	4741202	4709555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
transcript_137799.known	chr9	-	705	4	FSM	ENSG00000147853.17	ENST00000447596.4	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	126.625431884752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGTGTGTAACTATT	-2	True	NA	NA	False	ACTAAA	-41	NA	4741227	4712974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4740936
transcript_137801.known	chr9	+	2061	9	FSM	ENSG00000120158.12	ENST00000381750.9	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_3	11.3185412045899	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTGTAATAAGTGTAA	9	True	NA	20	True	ATTAAA	-17	NA	4792943	4861066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_4793228_4823547_4823620_4826857_4827034_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_137804.known	chr9	+	1644	8	FSM	ENSG00000120158.12	ENST00000442869.5	1644	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	39.1907944209726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATGTGAGGGAT	3	True	NA	NA	False	NA	NA	NA	4792979	4860861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_4793228_4823547_4823620_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_137813.nic	chr9	-	852	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	160	-106	160	94	3prime_fragment	FALSE	canonical	3	61	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATACGTAGTAACAATACA	444	False	NA	68	True	AATAAA	-17	NA	5304272	5299769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_5300445_5304095
transcript_137814.known	chr9	-	928	2	FSM	ENSG00000107014.9	ENST00000381627.4	928	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTTGTCTTTTTATTA	0	True	NA	-26	True	ATTAAA	-23	NA	5304716	5299863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5300445_5304369
transcript_137815.nic	chr9	-	746	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	160	0	160	0	3prime_fragment	FALSE	canonical	3	61	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGAAAAGCCTTTTT	444	False	NA	-38	True	ATTAAA	-11	NA	5304272	5299875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_5300445_5304095
transcript_137816.nic	chr9	-	501	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	160	245	160	-245	3prime_fragment	FALSE	canonical	3	61	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTGCTAGATTTTGC	444	False	NA	-1	True	AATAAA	-26	NA	5304272	5300120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_5300445_5304095
transcript_137817.nnic	chr9	-	672	4	NNC	ENSG00000107018.8	novel	764	2	NA	NA	-27	26900	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	9.20144916122817	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATCCAATGTAGCACCGA	455	False	NA	45	True	AATGAA	-33	NA	5339423	5308029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_5308269_5310931_5311073_5335467_5335598_5339261
transcript_13782.known	chr1	+	7765	5	FSM	ENSG00000067533.6	ENST00000366932.4	7765	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	28.995689334796	3413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTTCTTGATTTTT	-8	True	NA	20	True	AATAAA	-21	NA	218285292	218337983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_218285456_218302293_218302560_218305027_218305126_218307430_218307633_218330947
transcript_137822.nnic	chr9	-	480	3	NNC	ENSG00000107018.8	novel	764	2	NA	NA	-27	26849	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	10.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCCAAATCTCAATGAAA	455	False	NA	-6	True	AATAAA	-19	NA	5339423	5308080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_5308269_5335467_5335598_5339261
transcript_137824.known	chr9	-	1009	2	FSM	ENSG00000107018.8	ENST00000223862.2	1009	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGGTGGACCAAAATGT	2	True	NA	NA	False	AATACA	-18	NA	5339876	5334929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5335598_5339535
transcript_137825.known	chr9	-	764	2	FSM	ENSG00000107018.8	ENST00000487557.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCATACATAATAACAATA	482	False	NA	NA	False	AATAAA	-15	NA	5339396	5334968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5335598_5339261
transcript_137826.nnic	chr9	-	698	2	NNC	ENSG00000107018.8	novel	764	2	NA	NA	-26	9	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAACAATACAGTACCTA	456	False	NA	NA	False	AATAAA	-24	NA	5339422	5334959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_5335598_5339362
transcript_137842.known	chr9	-	981	6	FSM	ENSG00000107020.10	ENST00000223864.7	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	42.218479366268	1959	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-4	True	NA	-6	True	AATAAA	-20	NA	5437925	5357970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437788
transcript_137843.known	chr9	-	683	2	FSM	ENSG00000286162.3	ENST00000650674.2	717	2	34	0	-34	0	multi-exon	FALSE	canonical	1	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTCTTCCCTCACCA	-43	True	NA	NA	False	AATAAA	-22	NA	5628981	5577020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5577512_5628789
transcript_137844.nnic	chr9	-	998	2	NIC	ENSG00000286162.3	novel	717	2	NA	NA	-568	-243	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTTTGGATAGTTTGT	NA	False	NA	-1	True	TATAAA	-33	NA	5630316	5577263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_5577512_5629566
transcript_137846.nic	chr9	-	1742	3	ISM	ENSG00000183354.12	ENST00000381461.6	6884	7	318	49149	318	6	5prime_fragment	FALSE	canonical	3	11	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAGAAATTGAAAG	8169	False	NA	NA	False	AAAAAG	-9	NA	6007469	5968170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_5969437_5988344_5988546_6007194
transcript_137847.known	chr9	-	1000	2	FSM	ENSG00000137040.10	ENST00000485372.1	1000	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTGGAATATACAGAACAA	8	True	NA	NA	False	NA	NA	NA	6015612	6013497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_6014357_6015471
transcript_137849.known	chr9	-	4600	1	FSM	ENSG00000137040.10	ENST00000259569.6	4600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATTGTGTCTGGAACT	-4	True	NA	-7	True	AATAAA	-31	NA	6015624	6011024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_6011000_6015600
transcript_137850.nnic	chr9	+	794	3	NNC	ENSG00000228739.1	novel	499	2	NA	NA	-27090	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTAAAGTCCTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	6020269	6066717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_6020616_6023446_6023542_6066364
transcript_137856.nnic	chr9	+	774	3	NNC	ENSG00000236924.2	novel	906	3	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTATACTGTGTTTT	-24	True	NA	NA	False	AATACA	-19	NA	6645828	6670330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_6646086_6669543_6669729_6669998
transcript_137857.known	chr9	+	526	3	FSM	ENSG00000236924.2	ENST00000413145.2	906	3	135	245	81	-245	multi-exon	FALSE	canonical	3	25	junction_2	2.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCTGTTTTGAAAC	55	False	NA	7	True	AATAAA	-16	NA	6645955	6670635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6646086_6669543_6669729_6670424
transcript_137862.nic	chr9	+	1044	2	FSM	ENSG00000236924.2	ENST00000688297.1	1035	2	-13	4	8	-4	multi-exon	FALSE	canonical	3	30	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGTTATACTGTGTTTT	-24	True	NA	NA	False	AATACA	-19	NA	6645828	6670330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6646086_6669543
transcript_137868.known	chr9	+	511	3	FSM	ENSG00000229611.2	ENST00000664463.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCATGGGTAATTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	6704269	6707777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6704344_6704452_6704654_6707541
transcript_137869.known	chr9	+	475	3	FSM	ENSG00000229611.2	ENST00000412339.2	475	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGGTAATTTTTGTAT	NA	False	NA	NA	False	AATAAA	-19	NA	6704331	6707780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6704367_6704452_6704654_6707541
transcript_137872.known	chr9	+	4338	22	FSM	ENSG00000107077.19	ENST00000381309.8	4338	22	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	13.7147817370616	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	13	True	NA	5	True	AATAAA	-18	NA	6757972	7175648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797_7169891_7174552
transcript_137879.known	chr9	+	1406	4	FSM	ENSG00000107077.19	ENST00000401787.7	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	20.8219969156552	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTATATTGTCCTTTT	9	True	NA	NA	False	ATTAAA	-18	NA	6757653	6815149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630
transcript_137885.nnic	chr9	+	676	2	Fusion	ENSG00000229611.2_ENSG00000225489.8	novel	475	3	NA	NA	4	138	intron_retention	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAGAAAAAGAAAACTGC	NA	False	NA	NA	False	NA	NA	NA	6704335	6718230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_+_6704654_6717872
transcript_137890.known	chr9	-	2456	2	FSM	ENSG00000137038.8	ENST00000358227.5	2456	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	7505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCAAAGTGTGTTTGG	-2	True	NA	NA	False	AATAAA	-20	NA	7799778	7796499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_7798638_7799460
transcript_137891.known	chr9	-	458	3	FSM	ENSG00000137038.8	ENST00000469050.1	458	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTCTTTGTCTTATCTG	NA	False	NA	NA	False	AATAAA	-18	NA	7888380	7798343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_7798638_7833924_7834007_7888298
transcript_137895.nnic	chr9	+	1376	3	NNC	ENSG00000225706.2	novel	1959	2	NA	NA	-151	3	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGTGAGGACTACT	NA	False	NA	22	True	AATAAA	-16	NA	8857975	8861727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_8858324_8859955_8860038_8860781
transcript_137896.known	chr9	+	1959	2	FSM	ENSG00000225706.2	ENST00000430766.1	1959	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTTTGTGAGGACT	9	True	NA	19	True	AATAAA	-13	NA	8858133	8861724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_8858324_8859955
transcript_137897.known	chr9	+	1668	2	FSM	ENSG00000225706.2	ENST00000447950.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACAGGAGAATTGCTTG	5	True	NA	NA	False	NA	NA	NA	8858129	8862255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_8858324_8860781
transcript_1379.known	chr1	+	1094	5	FSM	ENSG00000173614.14	ENST00000403197.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	6.01560470775798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGCAGTGGTCTCT	NA	False	NA	4	True	AATAAA	-17	NA	9943427	9981766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9981255
transcript_137902.known	chr9	+	348	1	FSM	ENSG00000212829.8	ENST00000470205.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	23	False	NA	NA	False	NA	NA	NA	9090897	9091245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_9090900_9091200
transcript_137904.known	chr9	+	2683	2	FSM	ENSG00000153714.6	ENST00000319264.4	2683	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCACTGATCTTTTC	-1	True	NA	NA	False	ATTAAA	-16	NA	12775019	12823060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_12776028_12821385
transcript_137905.known	chr9	+	739	2	FSM	ENSG00000153714.6	ENST00000489107.1	739	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTCAGTAGCTCA	390	False	NA	NA	False	AATAAA	-20	NA	12775667	12777578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_12776028_12777199
transcript_137917.known	chr9	-	7821	47	FSM	ENSG00000107186.17	ENST00000319217.12	7821	47	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_20	31.9466118914378	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	-7	True	NA	NA	False	AATAAA	-25	NA	13279692	13105706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13143465_13143565_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
transcript_137918.nnic	chr9	-	439	4	NNC	ENSG00000234740.1	novel	457	3	NA	NA	-188	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTACTTTTTTTCTTCTG	310	False	NA	-7	True	AATAAA	-23	NA	13279375	13274509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_13274611_13276573_13276772_13278411_13278503_13279326
transcript_137922.known	chr9	-	457	3	FSM	ENSG00000234740.1	ENST00000442428.1	457	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTACTTTTTTTCTTCTG	498	False	NA	-7	True	AATAAA	-23	NA	13279187	13274509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_13274611_13276573_13276772_13279029
transcript_137923.known	chr9	-	3318	12	FSM	ENSG00000147862.18	ENST00000397581.6	3318	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.63698627216145	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAATGAAAAAAAAAG	7866	False	NA	NA	False	NA	NA	NA	14314519	14087599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14088327_14102421_14102511_14112998_14113082_14116180_14116347_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_137924.known	chr9	-	3129	10	FSM	ENSG00000147862.18	ENST00000397579.6	3129	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	5.45690184791497	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAATGAAAAAAA	11	True	NA	NA	False	NA	NA	NA	14314582	14087602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14088327_14102421_14102511_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_137925.known	chr9	-	8198	9	FSM	ENSG00000147862.18	ENST00000380959.7	8198	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4.715334028465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	8400	False	NA	-1	True	AATAAA	-18	NA	14313985	14081847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14088327_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_137926.known	chr9	+	793	2	FSM	ENSG00000225472.2	ENST00000440947.1	793	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACTTATATGAAATTCC	886	False	NA	NA	False	NA	NA	NA	14347319	14357908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_14347356_14357151
transcript_13793.known	chr1	+	492	2	FSM	ENSG00000067533.6	ENST00000491428.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTATGTGAAGGTGGAT	41	False	NA	NA	False	NA	NA	NA	218285341	218302671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_218285456_218302293
transcript_137930.known	chr9	-	9121	10	FSM	ENSG00000175893.12	ENST00000380916.9	9121	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	23.1900361745681	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTTTTTATCCTCTTA	-3	True	NA	0	True	AATAAA	-18	NA	14693432	14611070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14619099_14619638_14619683_14639895_14640013_14658748_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
transcript_137939.nic	chr9	-	1122	7	ISM	ENSG00000175893.12	ENST00000380916.9	9121	10	88	47400	-79	18895	5prime_fragment	FALSE	canonical	3	48	junction_4	25.9143889674357	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATGTTTATATC	-12	True	NA	NA	False	NA	NA	NA	14693344	14658470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
transcript_13794.known	chr1	-	557	3	FSM	ENSG00000232480.2	ENST00000414452.2	900	3	337	6	200	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATGTGTGTTGTGTAT	318	False	NA	NA	False	AATAAA	-37	NA	218345678	218344195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_218344463_218345174_218345389_218345602
transcript_137946.known	chr9	-	1231	2	FSM	ENSG00000147869.5	ENST00000380911.4	1231	2	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_1	0	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGCGAGACCATAAA	0	True	NA	9	True	NA	NA	NA	14722733	14719723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14720387_14722165
transcript_137947.nic	chr9	-	985	4	ISM	ENSG00000164946.20	ENST00000427623.5	1421	11	26900	-214	26900	0	3prime_fragment	FALSE	canonical	1	22	junction_1	6.59966329107444	105	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGGTTTGTTTATTCC	NA	False	NA	-47	True	AATAAA	-19	NA	14747261	14737151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_14737596_14740148_14740235_14746352_14746469_14746922
transcript_13795.known	chr1	-	581	4	FSM	ENSG00000228063.3	ENST00000441331.2	581	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGGATAATACTTCTTAA	31	False	NA	NA	False	ATTAAA	-11	NA	219173748	219100625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_219100755_219149938_219150032_219156119_219156200_219173469
transcript_137951.nnic	chr9	-	840	3	NIC	ENSG00000164946.20	novel	2481	14	NA	NA	26959	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	18	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGGTTTGTTTATTCC	NA	False	NA	-47	True	AATAAA	-19	NA	14747202	14737151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_14737596_14746352_14746469_14746922
transcript_137956.nic	chr9	-	1277	5	ISM	ENSG00000232000.3	ENST00000652088.1	7242	6	-64	8625	-24	-8625	5prime_fragment	FALSE	canonical	1	1	junction_4	3.35410196624968	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGGACTCCTTGTCTG	NA	False	NA	NA	False	ATTAAA	-22	NA	14993219	14931360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_14931724_14987892_14987957_14989299_14989341_14990227_14990346_14992528
transcript_137958.nnic	chr9	-	1058	5	NNC	ENSG00000232000.3	novel	1944	10	NA	NA	-24	-20258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.89711431702997	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	14993219	14942993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_14943138_14987892_14987957_14989299_14989341_14990227_14990346_14992528
transcript_137961.nnic	chr9	-	1113	4	NIC	ENSG00000232000.3	novel	7242	6	NA	NA	-18	-8625	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	3.55902608401044	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGGACTCCTTGTCTG	-10	True	NA	NA	False	ATTAAA	-22	NA	14993173	14931360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_14931724_14987892_14987957_14989299_14989341_14992528
transcript_137966.known	chr9	-	998	1	FSM	ENSG00000214110.3	ENST00000397561.3	998	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTCTGATGTCATATCA	350	False	NA	NA	False	AAAAAG	-15	NA	14922334	14921336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14921300_14922300
transcript_137969.nnic	chr9	+	768	5	NNC	ENSG00000215237.6	novel	1188	8	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.1118742080783	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTCTGCCTGGTTTTC	745	False	NA	NA	False	AATAAA	-23	NA	14993258	15019729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_14993350_14997163_14997324_15001633_15001733_15017354_15017528_15019484
transcript_137974.known	chr9	-	10483	20	FSM	ENSG00000155158.20	ENST00000512701.6	10483	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	10.3765663971232	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTATTCTGGTTG	NA	False	NA	-4	True	AATAAA	-16	NA	15307360	15163621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_137988.nic	chr9	-	666	5	ISM	ENSG00000155158.20	ENST00000505732.5	1881	15	-15	24679	-15	2872	5prime_fragment	FALSE	canonical	3	61	junction_2	9.06917857360853	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGACGAGTCATTAAATA	NA	False	NA	4	True	NA	NA	NA	15307375	15211265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_137993.nnic	chr9	-	892	2	NNC	ENSG00000155158.20	novel	10483	20	NA	NA	-61	-56528	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGACTGCAGAAAAGAT	NA	False	NA	-53	True	AATAAA	-16	NA	15307270	15305569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_15306275_15307083
transcript_137994.nnic	chr9	-	431	2	NNC	ENSG00000155158.20	novel	10483	20	NA	NA	-25	-56953	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGCTCCTCTGCATGAC	-11	True	NA	NA	False	AATAAA	-19	NA	15307234	15305994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_15306275_15307083
transcript_137995.known	chr9	-	900	4	FSM	ENSG00000155158.20	ENST00000506891.1	900	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.8839345385363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCATATAATTTGGCTAC	14	True	NA	NA	False	AATAAA	-18	NA	15307209	15249041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_15249688_15249917_15250011_15267913_15267949_15307083
transcript_137998.known	chr9	+	2524	10	FSM	ENSG00000164975.16	ENST00000490969.5	2524	10	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_9	60.0255089807247	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTCTTTTTTCGA	4	True	NA	7	True	TATAAA	-16	NA	15422868	15462460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630
transcript_1380.known	chr1	+	3734	5	FSM	ENSG00000173614.14	ENST00000377205.6	3734	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	5.7662812973354	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTCTGATGGA	14	True	NA	2	True	AATAAA	-14	NA	9943474	9985498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9982300
transcript_138002.nic	chr9	+	1187	7	ISM	ENSG00000164989.17	ENST00000380701.8	6553	26	-105	350735	-105	59278	5prime_fragment	FALSE	canonical	2	7	junction_5	2.14087209644419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGAAAAATTAGAAACAGA	48	False	NA	NA	False	AAGAAA	-1	NA	15552937	15623302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_15553303_15563977_15564130_15571623_15571760_15578848_15579024_15591365_15591557_15594040_15594173_15623266
transcript_138009.nic	chr9	+	622	3	ISM	ENSG00000164989.17	ENST00000380701.8	6553	26	-105	402309	-105	7704	5prime_fragment	FALSE	canonical	3	9	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAGAAATAACAACCAAAC	48	False	NA	NA	False	AAAAAG	-5	NA	15552937	15571728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_15553303_15563977_15564130_15571623
transcript_13801.known	chr1	+	2169	5	FSM	ENSG00000143353.12	ENST00000483635.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	92.5270230797468	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	19	False	NA	20	True	AATAAA	-25	NA	219173895	219212865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219174305_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_138010.known	chr9	+	6553	26	FSM	ENSG00000164989.17	ENST00000380701.8	6553	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	4.28504375706947	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGGTATCTAACTTTA	13	True	NA	NA	False	AATAAA	-19	NA	15553042	15974037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_15553303_15563977_15564130_15571623_15571760_15578848_15579024_15591365_15591557_15594040_15594173_15623266_15623414_15657126_15657220_15666162_15666324_15678757_15678897_15695234_15695338_15721768_15721876_15723680_15723747_15724775_15724977_15727868_15728037_15729609_15729799_15744272_15744778_15745514_15745632_15777599_15777827_15778967_15779151_15784508_15784695_15846701_15846848_15848892_15848948_15874531_15874664_15920269_15920423_15971608
transcript_138016.nic	chr9	-	958	5	NIC	ENSG00000173068.18	novel	662	3	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	19.6596032513375	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTCATTCCTAAGA	1170	False	NA	NA	False	AATAAA	-19	NA	16870815	16579790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_16580149_16582982_16583086_16727796_16727998_16738359_16738486_16870645
transcript_138022.known	chr9	-	662	3	FSM	ENSG00000173068.18	ENST00000468187.6	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	27	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTCATTCCTAAGA	-1	True	NA	NA	False	AATAAA	-19	NA	16727997	16579790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_16580149_16582982_16583086_16727796
transcript_138023.known	chr9	-	4841	9	FSM	ENSG00000173068.18	ENST00000484726.5	4841	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	25.645418694184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATGGTCTTGTTTT	-22	True	NA	NA	False	AAAAAG	-2	NA	16870760	16418293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_16419650_16421261_16421296_16429299_16430000_16435554_16437525_16552529_16552766_16582982_16583086_16727796_16727998_16738359_16738486_16870645
transcript_138024.known	chr9	+	428	3	FSM	ENSG00000234779.1	ENST00000450445.1	428	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	NA	False	NA	4	True	AATAAA	-17	NA	16726813	16727524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_16726956_16727030_16727107_16727314
transcript_138025.nic	chr9	+	571	2	NIC	ENSG00000234779.1	novel	428	3	NA	NA	-68	0	intron_retention	FALSE	canonical	3	25	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	NA	False	NA	4	True	AATAAA	-17	NA	16726745	16727524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_16727107_16727314
transcript_138033.nnic	chr9	+	1292	2	NNC	ENSG00000044459.15	novel	4871	7	NA	NA	-125269	-2797	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTTTAC	NA	False	NA	NA	False	NA	NA	NA	17290548	17299254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_17290776_17298189
transcript_138035.known	chr9	+	2272	3	FSM	ENSG00000044459.15	ENST00000484374.1	2272	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	42.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTCATGCTGATTCTG	NA	False	NA	NA	False	AATAAA	-8	NA	17134981	17168556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_17135426_17143287_17143377_17166817
transcript_138036.known	chr9	+	4871	7	FSM	ENSG00000044459.15	ENST00000380641.4	4871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	27.9090785707208	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTCATTATAGTGTA	-2	True	NA	23	True	AATAAA	-35	NA	17135039	17302051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189
transcript_138037.known	chr9	+	5518	26	FSM	ENSG00000044459.15	ENST00000380647.8	5518	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.1652855744136	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCTCATTCATTTCTT	-2	True	NA	9	True	AATAAA	-17	NA	17135039	17503923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189_17298353_17309057_17309253_17330631_17330809_17332604_17332731_17340826_17340949_17342324_17342445_17366616_17366718_17388161_17388254_17394533_17395070_17409292_17409474_17415787_17415882_17415965_17416190_17457523_17457716_17462915_17463014_17464496_17464624_17465980_17466119_17466705_17466892_17484294_17484481_17486988_17487067_17502550
transcript_138038.known	chr9	+	2617	9	FSM	ENSG00000107295.10	ENST00000380607.5	2617	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	2.9474565306379	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGGCTCTGCTCCTTCA	-2	True	NA	28	True	AATAAA	-18	NA	17579065	17797124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_17579288_17747065_17747135_17761436_17761510_17786380_17786525_17787379_17787514_17789391_17789551_17791230_17791335_17793366_17793498_17795543
transcript_138039.known	chr9	+	824	4	FSM	ENSG00000178031.18	ENST00000431052.6	824	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTATGTACTAGACT	-1	True	NA	NA	False	AATAAA	-18	NA	18474143	18574527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029
transcript_13804.known	chr1	+	475	5	FSM	ENSG00000143353.12	ENST00000478794.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	105.178419839813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCATGGTACTGCAGA	13	False	NA	NA	False	NA	NA	NA	219174970	219211530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219175021_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_138040.nic	chr9	+	474	2	ISM	ENSG00000178031.18	ENST00000431052.6	824	4	-47	69424	-3	-69424	5prime_fragment	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTCTTACGTGTTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	18474096	18505103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_18474296_18504828
transcript_138041.nnic	chr9	+	430	3	Antisense	novelGene_ENSG00000227167.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGAATTTGCTCATTGTT	NA	False	NA	NA	False	ATTAAA	-19	NA	18333373	18439277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_+_18333459_18336331_18336432_18439032
transcript_138043.known	chr9	+	1599	1	FSM	ENSG00000155876.6	ENST00000380527.3	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCTTATTTGAAATAA	3	True	NA	15	True	AATAAA	-19	NA	19049426	19051025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_19049400_19051000
transcript_138046.known	chr9	-	6323	17	FSM	ENSG00000147874.11	ENST00000380502.8	6323	17	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_2	73.759083127097	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGGAATTTCCTATA	20	True	NA	-17	True	AATAAA	-15	NA	19102904	19053140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_13805.known	chr1	+	1701	4	FSM	ENSG00000143353.12	ENST00000469590.5	1701	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	109.63880091768	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	22	True	NA	20	True	AATAAA	-25	NA	219174193	219212865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219174305_219179146_219179247_219210531_219210648_219211491
transcript_138052.nic	chr9	-	1790	14	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-62	10021	-62	-4398	5prime_fragment	FALSE	canonical	3	254	junction_8	24.9078776065707	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCAATTTCTAAGAAAA	138	False	NA	NA	False	AAGAAA	-5	NA	19102966	19063161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_138054.nic	chr9	-	1759	13	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-62	10372	-62	-4749	5prime_fragment	FALSE	canonical	3	254	junction_7	25.8902598587877	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTTAAAATAAGTCTC	138	False	NA	NA	False	NA	NA	NA	19102966	19063512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_138058.nic	chr9	-	882	5	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-62	36288	-62	-30665	5prime_fragment	FALSE	canonical	3	276	junction_1	15.0561449249135	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAGGAAAATGCACAGTA	138	False	NA	NA	False	NA	NA	NA	19102966	19089428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_138061.known	chr9	-	1897	8	FSM	ENSG00000147872.10	ENST00000276914.7	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	33.4352862608792	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTTTGTTCCATATG	-3	True	NA	-15	True	AATAAA	-25	NA	19127492	19115760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_138065.nic	chr9	-	749	5	ISM	ENSG00000147872.10	ENST00000276914.7	1897	8	-58	5119	-58	220	5prime_fragment	FALSE	canonical	3	254	junction_1	30.5481177816245	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGGAATTTTATCTTG	NA	False	NA	0	True	NA	NA	NA	19127550	19120879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_138066.known	chr9	-	631	5	FSM	ENSG00000147872.10	ENST00000380465.7	631	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	137.721412641608	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTCACCTGGCTTGT	13	False	NA	NA	False	AATAAA	-21	NA	19127476	19123234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19123477_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_138067.known	chr9	-	655	4	FSM	ENSG00000147872.10	ENST00000380464.7	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	16.5193489244852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCTATAAATGAAATTGC	-1	True	NA	NA	False	NA	NA	NA	19127490	19123312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19123648_19126113_19126310_19126396_19126449_19127418
transcript_138069.known	chr9	+	6831	32	FSM	ENSG00000137145.21	ENST00000602925.5	6831	32	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_12	14.4834039726425	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	19230434	19372858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_19230834_19276157_19276480_19286768_19287022_19288595_19288666_19290703_19290877_19296007_19296247_19298055_19298123_19299228_19299288_19300186_19300332_19305351_19305528_19316416_19316518_19316620_19316840_19324361_19324508_19325938_19325975_19326063_19326195_19328029_19328163_19331977_19332185_19334976_19335106_19336269_19336415_19340991_19341115_19342632_19342780_19345920_19347087_19350701_19350880_19352072_19352183_19352489_19352666_19356971_19357155_19357964_19358161_19360243_19360490_19361845_19361964_19369836_19369988_19371755_19371821_19372036
transcript_13808.known	chr1	+	1857	5	FSM	ENSG00000143353.12	ENST00000366928.10	1857	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	29.8695078633713	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTCTCTGCATCGA	1	True	NA	13	True	AATAAA	-18	NA	219173877	219212858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219173982_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_13809.known	chr1	+	1819	5	FSM	ENSG00000143353.12	ENST00000366927.3	1819	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	90.6542194274486	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	-2	True	NA	20	True	AATAAA	-25	NA	219173874	219212865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219173982_219179146_219179247_219193129_219193252_219210531_219210648_219211491
transcript_138092.known	chr9	-	863	6	FSM	ENSG00000137154.13	ENST00000315377.4	863	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	9590.01715535483	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTAACAAATAAATAAGAT	36	False	NA	-46	True	NA	NA	NA	19380198	19376284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380087
transcript_13810.known	chr1	-	4862	32	FSM	ENSG00000136628.18	ENST00000366923.8	4862	32	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_18	108.138231959092	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTTGTATTCATTT	181	False	220046529	-16	True	AATAAA	-14	NA	220046505	219968599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_219968957_219969057_219969123_219972068_219972148_219973237_219973399_219978545_219978720_219979417_219979616_219980084_219980241_219980755_219980858_219981377_219981458_219982771_219982845_219983188_219983399_219984205_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_138100.known	chr9	-	1355	5	FSM	ENSG00000137154.13	ENST00000380384.5	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	2345.21006521804	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	0	True	NA	-31	True	AATAAA	-2	NA	19380206	19376269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486
transcript_138101.known	chr9	-	1369	6	FSM	ENSG00000137154.13	ENST00000380394.9	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	2269.42958471947	107216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAAGTATGTACTTTT	-2	True	NA	NA	False	ACTAAA	-24	NA	19380236	19375714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380189
transcript_138102.known	chr9	-	892	2	FSM	ENSG00000137154.13	ENST00000380381.3	892	2	0	0	0	0	multi-exon	FALSE	canonical	3	21229	junction_1	0	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTTCGTGGTTGCATT	-2	True	NA	16	True	AAGAAA	-6	NA	19380236	19378773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19379619_19380189
transcript_138103.known	chr9	-	480	2	FSM	ENSG00000137154.13	ENST00000498815.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	21089	junction_1	0	8545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGACTTTTCATTG	3395	False	NA	-16	True	AATAAA	-17	NA	19376839	19376254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19376389_19376493
transcript_138104.known	chr9	-	345	2	FSM	ENSG00000234853.2	ENST00000449348.2	345	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAAATGACTTTGGTAG	NA	False	NA	NA	False	AATATA	-2	NA	19383887	19383216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19383350_19383675
transcript_138108.nnic	chr9	+	330	2	FSM	ENSG00000286685.2	ENST00000693587.1	243	2	-81	-6	-63	6	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTCTCATGGTAAA	218	False	NA	NA	False	AATAAA	-33	NA	19789095	19791071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_19789279_19790924
transcript_138109.known	chr9	-	6724	11	FSM	ENSG00000171843.17	ENST00000380338.9	6724	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	3.01496268633627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAATTGGATGTGATG	3	True	NA	NA	False	AATAAA	-23	NA	20622499	20341668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_20346575_20353524_20353597_20354807_20354880_20360741_20360842_20363475_20363606_20365668_20365745_20413720_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_138113.nic	chr9	-	1212	5	ISM	ENSG00000171843.17	ENST00000380338.9	6724	11	-70	72278	-70	-51242	5prime_fragment	FALSE	canonical	3	24	junction_2	1.80277563773199	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAGCTCAGAGGCTTTAT	1107	False	NA	NA	False	AAAAAG	-7	NA	20622569	20413946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_20414426_20448122_20448267_20456703_20456787_20620653_20620835_20622244
transcript_138115.nic	chr9	-	794	4	ISM	ENSG00000171843.17	ENST00000380338.9	6724	11	-70	106393	-70	-85357	5prime_fragment	FALSE	canonical	3	24	junction_1	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACAAACTAGTTCCTCA	1107	False	NA	NA	False	ATTAAA	-24	NA	20622569	20448061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_20448267_20456703_20456787_20620653_20620835_20622244
transcript_138118.nnic	chr9	+	619	3	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	-39	-96200	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	15	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTGTAAAAGTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	20658269	20673912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_20658460_20658690_20658827_20673619
transcript_138120.nnic	chr9	+	839	2	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	-28	-96200	intron_retention	FALSE	canonical	3	9	junction_1	0	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTGTAAAAGTTTTTC	NA	False	NA	18	True	AATAAA	-29	NA	20658280	20673912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_20658827_20673619
transcript_138121.nnic	chr9	+	610	2	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	22	-87887	intron_retention	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCTAAGATACTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	20658330	20682225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_20658827_20682111
transcript_138127.known	chr9	-	8277	7	FSM	ENSG00000188921.14	ENST00000495827.3	8277	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.72581562625261	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGTCAGAAATGTGT	-6	True	NA	NA	False	AATAAA	-26	NA	21031640	20999508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_21007120_21008020_21008147_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
transcript_13813.known	chr1	-	2968	21	FSM	ENSG00000136628.18	ENST00000609181.5	2968	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	235.076854454027	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	24	True	NA	NA	False	NA	NA	NA	220046451	219987295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_138130.nnic	chr9	-	741	6	NIC	ENSG00000188921.14	novel	8277	7	NA	NA	-29	-7439	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.22218803410712	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTATTTGATAAAAATC	NA	False	NA	1	True	AATAAA	-29	NA	21031669	21006947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_21007120_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
transcript_138132.nnic	chr9	-	611	5	NNC	ENSG00000188921.14	novel	1126	3	NA	NA	-29	781	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.98044484975618	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCACTTTCTGTGTATC	NA	False	NA	NA	False	AGTAAA	-16	NA	21031669	21014355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_21014549_21015941_21016011_21026595_21026724_21029294_21029399_21031552
transcript_138134.nnic	chr9	-	797	4	Genic_Genomic	ENSG00000198642.7	novel	5740	1	NA	NA	-14	5613	multi-exon	TRUE	canonical	1	1	junction_2	4.78423336480244	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTTTTGATTAAT	NA	False	NA	-4	True	AATAAA	-17	NA	21335418	21324051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_21324322_21329330_21329416_21330793_21330914_21335096
transcript_138136.nnic	chr9	-	580	2	Genic_Genomic	ENSG00000198642.7	novel	5740	1	NA	NA	-2	5613	multi-exon	FALSE	canonical	3	25	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTTTTGATTAAT	-22	True	NA	-4	True	AATAAA	-17	NA	21335406	21324051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_21324322_21335096
transcript_138137.known	chr9	-	5740	1	FSM	ENSG00000198642.7	ENST00000359039.5	5740	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATGACTTTCTCTTAT	-20	True	NA	NA	False	AATAAA	-22	NA	21335404	21329664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_21329700_21335400
transcript_138138.known	chr9	-	2557	4	FSM	ENSG00000171889.6	ENST00000654736.1	2557	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.39934634239519	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTCCTTTACTGATT	4485	False	NA	NA	False	ATTAAA	-10	NA	21559900	21453801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_21455945_21476898_21477036_21477168_21477293_21559747
transcript_138146.known	chr9	+	310	2	FSM	ENSG00000099810.21	ENST00000580675.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTTTGGCAGCC	-6	True	NA	NA	False	ATTAAA	-15	NA	21802646	21815607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_21802782_21815432
transcript_138147.known	chr9	+	1309	8	FSM	ENSG00000099810.21	ENST00000580718.1	1309	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	132.763407793637	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTTTGGTTATTTA	9	True	NA	NA	False	AAGAAA	-1	NA	21802661	21862367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859285_21859426_21861975
transcript_138148.known	chr9	+	2241	8	FSM	ENSG00000099810.21	ENST00000419385.5	2241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	131.558476173378	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTATTGTTATTT	4	True	NA	28	True	AATAAA	-21	NA	21802656	21863286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_21802782_21815432_21815545_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_138149.known	chr9	+	7557	8	FSM	ENSG00000099810.21	ENST00000580900.5	7557	8	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_7	127.569428875705	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCTTAGTTGTTACTT	-4	True	NA	NA	False	ATTAAA	-20	NA	21802648	21937651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21931007
transcript_138155.known	chr9	+	5586	2	FSM	ENSG00000176399.4	ENST00000325870.3	5586	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTATGCTACATT	0	True	NA	11	True	AATAAA	-14	NA	22446823	22455740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_22447733_22451063
transcript_138158.known	chr9	-	3789	7	FSM	ENSG00000107105.15	ENST00000544538.5	3789	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	36.5862755081131	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACAGTGTGGTGAGTA	-1	True	NA	-4	True	AATAAA	-14	NA	23821848	23690106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23821604
transcript_138159.known	chr9	-	3983	7	FSM	ENSG00000107105.15	ENST00000397312.7	3983	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	34.5193182628703	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACAGTGTGGTGAGTAGGT	-2	True	NA	-1	True	AATAAA	-17	NA	23826240	23690103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_23692885_23693447_23693487_23701378_23701605_23704917_23705072_23731021_23731126_23762005_23762250_23825805
transcript_13816.nic	chr1	-	3026	20	ISM	ENSG00000136628.18	ENST00000366923.8	4862	32	-25	18696	0	0	5prime_fragment	FALSE	canonical	3	586	junction_6	75.3652233958536	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	-1	True	NA	NA	False	NA	NA	NA	220046530	219987295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_138164.known	chr9	+	879	2	FSM	ENSG00000287843.1	ENST00000658911.1	879	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATATCTGGATGTAGATT	NA	False	NA	NA	False	AATAAA	-30	NA	23826490	23828877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_23826518_23828025
transcript_138189.known	chr9	-	1236	6	FSM	ENSG00000120159.13	ENST00000483493.6	1236	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	162.742741773635	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCACAGCAACTGGAGCT	8	True	NA	NA	False	NA	NA	NA	26892787	26842393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26842648_26861065_26861140_26884809_26884903_26886103_26886189_26887312_26887514_26892258
transcript_138190.known	chr9	-	2789	6	FSM	ENSG00000120159.13	ENST00000333916.8	2789	6	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_5	18.2909813842779	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTGTGTCTGTTCTAC	-7	True	NA	-2	True	ATTAAA	-18	NA	26892802	26840684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
transcript_138200.nic	chr9	-	828	5	ISM	ENSG00000120159.13	ENST00000333916.8	2789	6	-25	20404	-24	0	5prime_fragment	FALSE	canonical	3	338	junction_4	18.9390469665187	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGTTTGGAATTAAAAC	NA	False	NA	NA	False	NA	NA	NA	26892827	26861088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
transcript_138202.known	chr9	+	2163	20	FSM	ENSG00000096872.17	ENST00000443698.5	2163	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	43.6383398990071	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATCTTCTTTT	25	False	NA	NA	False	AATAAA	-14	NA	26947311	27062925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_26947464_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_13821.nic	chr1	-	941	7	ISM	ENSG00000136628.18	ENST00000609181.5	2968	21	-144	37852	-65	-23947	5prime_fragment	FALSE	canonical	3	653	junction_2	79.8094953971992	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATTTTGAGAAGGTAA	91	False	NA	15	True	AAAAAG	-5	NA	220046595	220025147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_138214.known	chr9	+	1462	14	FSM	ENSG00000096872.17	ENST00000429045.6	1462	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	49.9966862807252	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCGTGTGATTTACCAAA	-7	True	NA	NA	False	AATAAA	-21	NA	26956478	27036800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27036449
transcript_138218.known	chr9	-	4724	14	FSM	ENSG00000137055.15	ENST00000397292.8	4724	14	0	0	0	0	multi-exon	TRUE	canonical	3	303	junction_5	33.3408078404771	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATATACCCATTTCTT	5	True	NA	-5	True	AATAAA	-16	NA	26947242	26903371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_138222.nic	chr9	-	2931	13	NIC	ENSG00000137055.15	novel	4724	14	NA	NA	-248	539	combination_of_known_junctions	FALSE	canonical	3	154	junction_4	67.715704726944	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTGAGATTTTCCTGT	-1	True	NA	-10	True	AATAAA	-15	NA	26947490	26905343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_138224.known	chr9	-	2041	13	FSM	ENSG00000137055.15	ENST00000520884.5	2041	13	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	34.2818181483357	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	14	True	NA	-25	True	AATAAA	-23	NA	26947233	26907802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_138229.known	chr9	-	405	2	FSM	ENSG00000234676.1	ENST00000456198.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTTCCAATCTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	26956295	26955779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26956016_26956126
transcript_138231.known	chr9	+	4683	23	FSM	ENSG00000120156.22	ENST00000380036.10	4683	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_14	21.6367456039622	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGAGTGTGTCTCATAG	-1	True	NA	23	True	AATAAA	-23	NA	27109224	27230174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27180239_27180369_27183458_27183611_27185484_27185630_27190528_27190691_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205066_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
transcript_138232.known	chr9	+	4666	23	FSM	ENSG00000120156.22	ENST00000615002.4	4666	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	41.6788439505926	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGGAGTGTGTCTCATA	-14	True	NA	22	True	AATAAA	-22	NA	27109148	27230173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_27109643_27157830_27158143_27168494_27168606_27169476_27169630_27172615_27172748_27173221_27173363_27183458_27183611_27185484_27185630_27190528_27190691_27191928_27191966_27192488_27192624_27197314_27197600_27202819_27203120_27204910_27205066_27206581_27206793_27209120_27209232_27212706_27212898_27213483_27213598_27217687_27217759_27218776_27218818_27220048_27220146_27228205_27228306_27229157
transcript_138233.known	chr9	-	6487	4	FSM	ENSG00000120162.10	ENST00000262244.6	6487	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	11.5181016954473	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTCTTTTTTTAA	-36	True	NA	-3	True	AATAAA	-17	NA	27529814	27325208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27330617_27359033_27359237_27455132_27455749_27529554
transcript_138235.known	chr9	-	3231	11	FSM	ENSG00000147894.17	ENST00000380003.8	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	22.8142499328819	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-5	True	NA	-3	True	AATAAA	-17	NA	27573481	27546545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_138236.known	chr9	-	3338	11	FSM	ENSG00000147894.17	ENST00000619707.5	3338	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	55.6704589526618	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	NA	False	NA	-3	True	AATAAA	-17	NA	27573866	27546545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573708
transcript_138241.nic	chr9	-	1573	5	ISM	ENSG00000147894.17	ENST00000644136.1	2678	12	-38	13678	-1	-285	5prime_fragment	FALSE	canonical	3	132	junction_4	26.5082534317144	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCACTTTTATGTTCAC	-19	True	NA	NA	False	AATAAA	-20	NA	27573495	27560785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_138247.nnic	chr9	-	485	3	Antisense	novelGene_ENSG00000277646.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTCTCAGGCAGTTATT	NA	False	NA	NA	False	ATTAAA	-21	NA	29450885	29304745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_-_29304881_29450388_29450507_29450653
transcript_138249.known	chr9	-	348	1	FSM	ENSG00000233278.1	ENST00000440331.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	24	False	NA	NA	False	NA	NA	NA	30832225	30831877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_30831900_30832200
transcript_138250.known	chr9	+	7443	21	FSM	ENSG00000122729.19	ENST00000309951.8	7443	21	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_9	57.1742949235056	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCTCCTTATTTA	-23	True	NA	NA	False	ATTAAA	-16	NA	32384642	32454769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
transcript_138256.known	chr9	-	4628	18	FSM	ENSG00000107201.11	ENST00000379883.3	4628	18	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_2	33.3228934054877	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	28	True	NA	NA	False	TATAAA	-4	NA	32526196	32455301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32526060
transcript_138262.known	chr9	+	585	3	FSM	ENSG00000235453.12	ENST00000450093.3	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.5	3418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTTTATTTTTGCATT	-4	True	NA	17	True	AATAAA	-18	NA	32551675	32553007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32551808_32552233_32552480_32552800
transcript_138264.known	chr9	-	4131	3	FSM	ENSG00000197579.8	ENST00000360538.7	4131	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	37	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTACATTGGTAGTT	18	True	NA	-8	True	AATAAA	-21	NA	32552586	32540543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32544327_32550773_32550969_32552433
transcript_138267.known	chr9	-	761	3	FSM	ENSG00000165264.11	ENST00000366466.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	1129.5	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-3	True	NA	-19	True	AATAAA	-8	NA	32573184	32553532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32553945_32558909_32558955_32572880
transcript_138269.known	chr9	+	318	2	FSM	ENSG00000235453.12	ENST00000635960.1	318	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATTTTTGCATTATC	178	False	NA	20	True	AATAAA	-21	NA	32552542	32553010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32552651_32552800
transcript_13827.nnic	chr1	-	1317	10	NNC	ENSG00000162813.18	novel	1152	11	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9312334656004	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTTATTCACCAGC	NA	False	NA	0	True	AATAAA	-14	NA	220089851	220057727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_220057918_220058817_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_138270.known	chr9	-	3621	2	FSM	ENSG00000197579.8	ENST00000379858.1	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTGTATTCAACAAAAG	51	False	NA	31	True	AGTAAA	-3	NA	32552553	32540825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32544327_32552433
transcript_138273.known	chr9	+	668	1	FSM	ENSG00000235453.12	ENST00000644531.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTTTTGCATTATCCT	19	True	NA	22	True	AATAAA	-23	NA	32552344	32553012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32552300_32553000
transcript_138274.known	chr9	-	1361	4	FSM	ENSG00000165264.11	ENST00000379847.8	1361	4	0	0	0	0	multi-exon	FALSE	canonical	3	2366	junction_1	167.286181935827	10020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGAATTTTATTTTTA	-9	True	NA	-7	True	AATAAA	-14	NA	32573159	32553000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32553945_32558909_32558955_32570959_32571053_32572880
transcript_138275.known	chr9	-	666	3	FSM	ENSG00000165264.11	ENST00000350021.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	1313.5	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAACGGTATGGAAAA	-9	True	NA	22	True	NA	NA	NA	32573159	32553650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32553945_32570959_32571053_32572880
transcript_138276.known	chr9	+	5342	2	FSM	ENSG00000188133.6	ENST00000342743.6	5342	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGTCCAGTTCACATA	-4	True	NA	NA	False	AATAAA	-19	NA	32783539	32789201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32783806_32784125
transcript_138279.known	chr9	-	1914	9	FSM	ENSG00000137074.20	ENST00000465003.6	1914	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	154.038905394059	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	24	True	NA	-13	True	AATAAA	-10	NA	33001583	32972619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_32997242_32997349_33001566
transcript_138283.known	chr9	-	2057	9	FSM	ENSG00000137074.20	ENST00000479656.6	2057	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	148.365627336658	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTATTCAGTTG	-6	True	NA	-15	True	AATAAA	-8	NA	33001613	32972621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_32997242_32997349_33001566
transcript_138294.known	chr9	-	1938	9	FSM	ENSG00000137074.20	ENST00000379819.6	1938	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	166.21597396159	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTAGGTGGAAACTATT	-13	True	NA	-4	True	AATAAA	-25	NA	33001620	32972752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_32997242_32997349_33001566
transcript_13830.known	chr1	-	2400	9	FSM	ENSG00000162813.18	ENST00000322067.12	2400	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.79038842777054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	14	True	NA	48	True	ATTAAA	-21	NA	220089788	220057481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_138301.known	chr9	-	2023	8	FSM	ENSG00000137074.20	ENST00000379825.7	2023	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	156.710574249578	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-21	True	NA	1	True	AATAAA	-24	NA	33001628	32972605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_138304.known	chr9	-	2101	8	FSM	ENSG00000137074.20	ENST00000673487.1	2101	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	145.693135719973	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	-13	True	NA	-30	True	AAAAAG	-32	NA	33025130	32972636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024803
transcript_138305.known	chr9	-	1814	8	FSM	ENSG00000137074.20	ENST00000485479.6	1814	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	164.429502293505	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTTTTTCCCTGAGA	3	True	NA	-47	True	AAAAAG	-15	NA	33025065	32972653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988091_32988125_32989758_32989896_33024999
transcript_138314.nic	chr9	-	2003	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_6	103.004061738816	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	NA	False	NA	-9	True	AATAAA	-14	NA	33001659	32972615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_138318.known	chr9	-	1977	8	FSM	ENSG00000137074.20	ENST00000379817.7	1977	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	139.687844415865	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-21	True	NA	-9	True	AATAAA	-14	NA	33001628	32972615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_13834.nnic	chr1	-	934	8	NNC	ENSG00000162813.18	novel	1152	11	NA	NA	2	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.646004113154	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTTATTCACCAGC	NA	False	NA	0	True	AATAAA	-14	NA	220089851	220057727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_220057918_220062858_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_138348.nic	chr9	-	1243	8	NIC	ENSG00000137074.20	novel	2057	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_6	103.004061738816	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	NA	False	NA	-11	True	ATTAAA	-21	NA	33001659	32973375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001566
transcript_138349.known	chr9	-	1938	8	FSM	ENSG00000137074.20	ENST00000467331.6	1938	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	163.479138031214	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	3215	False	NA	-30	True	AAAAAG	-32	NA	33024852	32972636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33024803
transcript_138366.known	chr9	-	1742	7	FSM	ENSG00000137074.20	ENST00000309615.8	1742	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	154.401802666506	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGATGCATGGAAAGG	12	True	NA	42	True	NA	NA	NA	33001595	32972706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
transcript_138367.known	chr9	-	1068	7	FSM	ENSG00000137074.20	ENST00000476858.6	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	127.93542207779	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-34	True	NA	-11	True	ATTAAA	-21	NA	33001641	32973375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_13837.known	chr1	-	2357	8	FSM	ENSG00000162813.18	ENST00000414869.6	2357	8	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	17.7177415983793	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	NA	False	NA	48	True	ATTAAA	-21	NA	220089853	220057481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220073966_220074072_220079726_220079855_220089685
transcript_138370.known	chr9	-	1962	7	FSM	ENSG00000137074.20	ENST00000472896.6	1962	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	160.71550087724	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	-6	True	NA	-13	True	AATAAA	-10	NA	33001613	32972619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001515
transcript_138387.known	chr9	-	1805	7	FSM	ENSG00000137074.20	ENST00000672438.1	1805	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	175.394238471191	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTCCCTGAGAATA	-21	True	NA	-44	True	AAAAAG	-18	NA	33001628	32972650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_33001566
transcript_138398.known	chr9	-	1725	7	FSM	ENSG00000137074.20	ENST00000460940.6	1725	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	156.692551053187	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAAGTTGCGTAGAGC	15	True	NA	-70	True	NA	NA	NA	33025102	32972676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33024999
transcript_13840.nnic	chr1	-	974	7	NNC	ENSG00000162813.18	novel	1152	11	NA	NA	2	-65	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.9972220292942	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTAGATTTTTATTTTTA	NA	False	NA	-19	True	ATTAAA	-16	NA	220089851	220057548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_220057918_220067344_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_138406.known	chr9	-	2728	6	FSM	ENSG00000137074.20	ENST00000672244.1	2728	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	140.242076425016	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGAGTGAGACCC	5	True	NA	NA	False	NA	NA	NA	33001602	32971449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_138410.known	chr9	-	952	6	FSM	ENSG00000137074.20	ENST00000474658.7	952	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	149.081722555114	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCAGGTCTGACCATTG	28	True	NA	NA	False	NA	NA	NA	33001579	32973241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32989758_32989896_33001566
transcript_138427.known	chr9	-	645	2	FSM	ENSG00000137074.20	ENST00000473270.1	645	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCCCATAATCTTGTTG	7	True	NA	NA	False	NA	NA	NA	33025110	33015887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33016226_33024803
transcript_138428.known	chr9	-	397	2	FSM	ENSG00000137074.20	ENST00000489583.1	397	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTCACCCTCAGCGT	3080	False	NA	NA	False	NA	NA	NA	33024987	33019953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33020167_33024803
transcript_138429.known	chr9	-	2099	8	FSM	ENSG00000137074.20	ENST00000494649.5	2099	8	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_7	129.455847015616	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	86	False	NA	-9	True	AATAAA	-14	NA	33001521	32972615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001332
transcript_138430.known	chr9	-	1846	7	FSM	ENSG00000137074.20	ENST00000436040.7	1846	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	161.042437471204	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTATTCAGTTGTTT	-1	True	NA	-12	True	AATAAA	-11	NA	33025118	32972618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33025022
transcript_138431.known	chr9	-	1345	8	FSM	ENSG00000137074.20	ENST00000463596.6	1345	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	157.24490193222	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	85	False	NA	-11	True	ATTAAA	-21	NA	33001522	32973375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001332
transcript_13844.known	chr1	-	1152	11	FSM	ENSG00000162813.18	ENST00000354807.7	1152	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.0410503232817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTCTTTGTTATTCACC	30	True	NA	-3	True	AATAAA	-11	NA	220089772	220057730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220057918_220058945_220058993_220059685_220059792_220062756_220062955_220066072_220066118_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_138441.known	chr9	+	2319	9	FSM	ENSG00000086061.16	ENST00000330899.5	2319	9	0	0	0	0	multi-exon	FALSE	canonical	3	1987	junction_5	129.314297353386	4326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCACTACAGGCTTT	-1	True	NA	14	True	AATATA	-22	NA	33025272	33039907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33025384_33026474_33026617_33026812_33026991_33029884_33029990_33030439_33030668_33034215_33034331_33036573_33036690_33037014_33037116_33038684
transcript_138445.known	chr9	-	4176	6	FSM	ENSG00000086062.13	ENST00000379731.5	4176	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	10.9836241741968	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGGTGGTTTCTGTTTG	9	True	NA	-5	True	AATAAA	-18	NA	33167336	33110641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33113587_33113773_33113879_33115990_33116114_33120418_33120607_33135188_33135425_33166757
transcript_138446.known	chr9	+	3752	4	FSM	ENSG00000233554.6	ENST00000654325.1	3752	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.471404520791032	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAAATAGTGTAAGTC	948	False	NA	NA	False	AATATA	-7	NA	33166947	33182865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33167047_33177419_33177470_33178895_33178958_33179324
transcript_13845.known	chr1	+	3530	23	FSM	ENSG00000067704.10	ENST00000366922.3	3530	23	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_19	42.574412250933	2039	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGATTTTGGTGCAGA	4	True	NA	22	True	AATAAA	-18	NA	220094131	220148041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_220094484_220096103_220096227_220100489_220100650_220102128_220102278_220102362_220102413_220102494_220102605_220102686_220102778_220103446_220103563_220105890_220106061_220107060_220107152_220110785_220110938_220114313_220114475_220125236_220125340_220126749_220126844_220134401_220134511_220136808_220136912_220137917_220138044_220139007_220139140_220140182_220140290_220141802_220141949_220142943_220143135_220145508_220145654_220147492
transcript_138450.known	chr9	-	1396	8	FSM	ENSG00000107262.26	ENST00000379707.7	1396	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	259.341709813481	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCTCCTATCTGTTT	-10	True	NA	-32	True	AATGAA	-23	NA	33264720	33255048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262104_33262247_33262701_33262831_33264223
transcript_138452.nnic	chr9	-	1200	7	NNC	ENSG00000107262.26	novel	3820	7	NA	NA	417	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_6	227.403764749448	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTCTCTGTGGTTGTA	1544	False	NA	-8	True	AGTAAA	-19	NA	33264142	33255024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262701_33262831_33263723
transcript_138454.known	chr9	-	1128	7	FSM	ENSG00000107262.26	ENST00000379704.7	1128	7	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_6	40.6762283841011	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGTCTCTGTGGTTGT	1115	False	NA	-9	True	AGTAAA	-18	NA	33264571	33255025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262701_33262831_33264223
transcript_138455.known	chr9	+	399	4	FSM	ENSG00000122711.9	ENST00000379721.4	399	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	0.816496580927726	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGGTCAGTGTCTCT	-1	True	NA	7	True	AATAAA	-18	NA	33240166	33248567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33240270_33245111_33245153_33246615_33246729_33248425
transcript_138461.known	chr9	+	1901	8	FSM	ENSG00000086065.14	ENST00000223500.9	1901	8	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	59.6322060635023	1965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTAGAAGTCTCTGTA	11	True	NA	NA	False	AATAAA	-16	NA	33265048	33282070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33278112_33278226_33280808
transcript_138462.known	chr9	+	3513	16	FSM	ENSG00000086102.19	ENST00000318524.6	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	24.021841912911	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	15	True	NA	5	True	AATAAA	-15	NA	33290544	33348723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
transcript_138466.known	chr9	-	1825	6	FSM	ENSG00000165272.16	ENST00000297991.6	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	3.13687742827162	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTTGTGCAAATATC	1	True	NA	-13	True	AATAAA	-19	NA	33447593	33441159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320_33443459_33443765_33443893_33447422
transcript_138467.nic	chr9	-	1672	4	ISM	ENSG00000165272.16	ENST00000297991.6	1825	6	3990	0	-494	0	3prime_fragment	FALSE	canonical	3	18	junction_3	1.69967317119759	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTTGTGCAAATATC	-6	True	NA	-13	True	AATAAA	-19	NA	33443603	33441159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320
transcript_138468.known	chr9	-	4834	26	FSM	ENSG00000165271.17	ENST00000297990.9	4834	26	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_21	16.8380521438793	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCGTGTCCTTCCTAG	-18	True	NA	-1	True	NA	NA	NA	33473924	33461352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878_33464977_33465206_33465360_33465733_33465898_33466070_33466226_33466307_33466426_33466568_33466710_33466911_33466988_33467113_33467263_33467393_33467517_33467690_33467869_33468029_33468146_33468320_33468423_33468507_33468567_33468751_33468873_33468957_33469122_33469206_33469342_33469498_33469668_33470011_33470192_33472003_33472121_33472205_33472413_33473788
transcript_13847.known	chr1	-	388	1	FSM	ENSG00000232134.1	ENST00000419498.1	388	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGGGATGTAATACATA	NA	False	NA	NA	False	AAAACA	-29	NA	220144351	220143963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220144000_220144400
transcript_138477.nic	chr9	+	1750	9	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-433	31786	-433	1669	5prime_fragment	FALSE	canonical	2	7	junction_3	2	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACTTGAGTATCTC	NA	False	NA	NA	False	AAAAAG	-45	NA	33523817	33541227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146
transcript_13848.known	chr1	-	7256	35	FSM	ENSG00000118873.17	ENST00000358951.7	7256	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	36.7521390286796	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTCCTAAACATTCA	-7	True	NA	-41	True	AATAAA	-14	NA	220272453	220148292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220151407_220151605_220151765_220153184_220153407_220153967_220154058_220157269_220157489_220157801_220157877_220159385_220159422_220162197_220162269_220164732_220164800_220167292_220167400_220167501_220167676_220170891_220171121_220171888_220172050_220172636_220172743_220182256_220182355_220182717_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_138480.nic	chr9	+	1071	8	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	165	32801	22	654	5prime_fragment	FALSE	canonical	2	7	junction_3	1.88441513689613	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTTTGTATTTTTAGT	148	False	NA	NA	False	NA	NA	NA	33524415	33540212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077
transcript_138483.nic	chr9	+	1280	7	ISM	ENSG00000230453.10	ENST00000290943.10	3773	16	-330	31809	-187	1634	5prime_fragment	FALSE	canonical	1	1	junction_6	3.64005494464026	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTGAAAAAAAGAA	NA	False	NA	NA	False	AAAAAG	-10	NA	33524063	33541192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33541146
transcript_138487.known	chr9	+	873	4	FSM	ENSG00000281128.2	ENST00000627688.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	16.0485374896143	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAACTTCCTCATTCTTC	NA	False	NA	NA	False	AATAAA	-16	NA	33677267	33688011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33677510_33678089_33678288_33680893_33681074_33687758
transcript_138492.known	chr9	+	4477	5	FSM	ENSG00000107341.5	ENST00000263228.4	4477	5	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_4	34.5940746371398	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGACCCTCTTCTTTT	-3	True	NA	35	True	AATAAA	-36	NA	33817159	33920399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33817935_33886880_33886968_33900173_33900272_33911963_33912099_33917017
transcript_138494.nnic	chr9	+	1367	4	NIC	ENSG00000107341.5	novel	4477	5	NA	NA	566	-2409	combination_of_known_splicesites	FALSE	canonical	3	40	junction_3	251.862396293426	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCACTTGGTTGCTATT	231	False	NA	22	True	AATAAA	-21	NA	33817725	33917990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_33817935_33886880_33886968_33900173_33900272_33917017
transcript_138495.nnic	chr9	+	1413	4	NIC	ENSG00000107341.5	novel	4477	5	NA	NA	565	-2412	combination_of_known_splicesites	FALSE	canonical	3	66	junction_1	236.479738385061	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGAGCACTTGGTTGCT	230	False	NA	19	True	AATAAA	-18	NA	33817724	33917987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_33817935_33900173_33900272_33911963_33912099_33917017
transcript_138496.known	chr9	-	4275	29	FSM	ENSG00000137073.24	ENST00000379238.7	4275	29	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_17	41.3471490515837	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTCTCTGTGTGGTGTG	-2	True	NA	-7	True	AATAAA	-15	NA	34048887	33921692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_138505.known	chr9	-	4362	30	FSM	ENSG00000137073.24	ENST00000684158.1	4362	30	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_29	84.2662955233979	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	6	True	NA	-22	True	NA	NA	NA	34048879	33921707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34032798_34032909_34048824
transcript_138507.nic	chr9	-	500	5	ISM	ENSG00000137073.24	ENST00000683084.1	4165	25	-45	67183	17	5417	5prime_fragment	FALSE	canonical	3	251	junction_4	36.1317035302793	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAATAGAGAGAAGAAAAG	265	False	NA	-51	True	AAAAAG	-31	NA	34048932	33989063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_138508.known	chr9	-	4110	27	FSM	ENSG00000137073.24	ENST00000360802.6	4110	27	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_26	83.1788192770934	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGAGAGCATGCATGG	248	False	NA	-22	True	NA	NA	NA	34048949	33921707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048877
transcript_138509.known	chr9	-	3460	25	FSM	ENSG00000137073.24	ENST00000629575.2	3460	25	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_18	97.9321530306682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAAGGCTGTTTGGGTAT	-2	True	NA	-67	True	NA	NA	NA	34048887	33922140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34048824
transcript_138511.known	chr9	-	3592	9	FSM	ENSG00000198876.13	ENST00000361264.9	3592	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	17.832554500127	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTGAGTGAGTATT	-9	True	NA	-6	True	AATAAA	-16	NA	34126698	34086386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34088509_34089411_34089591_34093285_34093449_34096715_34096782_34098323_34098518_34106433_34106495_34107358_34107566_34125022_34125278_34126353
transcript_13852.nnic	chr1	-	1181	10	FSM	ENSG00000118873.17	ENST00000689820.1	1135	10	-45	-1	-5	1	multi-exon	FALSE	canonical	1	1	junction_1	54.8522144685041	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTCTACTTTTT	6	True	NA	NA	False	AATAAA	-17	NA	220272488	220200720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220200940_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_138520.known	chr9	+	2705	7	FSM	ENSG00000165006.14	ENST00000297661.9	2705	7	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	35.573476386519	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	-7	True	NA	10	True	AATAAA	-14	NA	34179042	34252523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34179241_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_138523.nnic	chr9	+	2717	7	NNC	ENSG00000165006.14	novel	2029	6	NA	NA	348	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	119.032791933801	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	343	False	NA	10	True	AATAAA	-14	NA	34179392	34252523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_34179603_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_138524.known	chr9	+	1753	6	FSM	ENSG00000165006.14	ENST00000626262.2	1753	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	124.59277667666	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGGGGAAGATTCGG	-5	True	NA	-64	True	NA	NA	NA	34179044	34251698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34179241_34220907_34220949_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_138525.known	chr9	+	2029	6	FSM	ENSG00000165006.14	ENST00000625521.2	2029	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	110.875425591066	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGGCCTAGTTGCTG	NA	False	NA	88	True	NA	NA	NA	34179004	34251850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34179241_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_138531.nic	chr9	-	1582	2	ISM	ENSG00000186638.17	ENST00000402558.7	6295	13	-16	57589	-16	1153	5prime_fragment	FALSE	canonical	3	31	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCTTGTTTTATTTTAA	NA	False	NA	NA	False	AAAAAG	-1	NA	34329284	34309968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_34311372_34329105
transcript_138533.known	chr9	+	998	5	FSM	ENSG00000164978.18	ENST00000379158.7	998	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.302814907189	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCTTCTAACCTGTT	-2	True	NA	23	True	AATAAA	-16	NA	34329568	34343699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34329600_34336228_34336342_34338712_34338848_34339023_34339167_34343123
transcript_138538.known	chr9	+	960	4	FSM	ENSG00000164978.18	ENST00000346365.8	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.4697670227235	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	5	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34329600_34338712_34338848_34339023_34339167_34343123
transcript_138539.known	chr9	+	1002	5	FSM	ENSG00000164978.18	ENST00000379155.9	1002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.6805829842313	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	5	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34329600_34336299_34336342_34338712_34338848_34339023_34339167_34343123
transcript_138540.known	chr9	+	825	3	FSM	ENSG00000164978.18	ENST00000618590.1	825	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	40	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	5	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34329600_34339023_34339167_34343123
transcript_138541.nnic	chr9	-	632	2	NNC	ENSG00000164976.9	novel	6447	2	NA	NA	-15	7258	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAATAGTTGGAGATTT	-17	True	NA	NA	False	AATAAA	-35	NA	34376913	34359407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_34359919_34376792
transcript_138542.known	chr9	-	596	5	FSM	ENSG00000164972.14	ENST00000379127.1	596	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.33742469849155	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	12	True	NA	2	True	AATAAA	-20	NA	34381560	34379018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34379182_34379645_34379733_34380896_34381132_34381368_34381445_34381525
transcript_138546.known	chr9	-	712	4	FSM	ENSG00000164972.14	ENST00000379133.7	712	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.94422221866655	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-28	True	NA	2	True	AATAAA	-20	NA	34381600	34379018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34379182_34379645_34379733_34380901_34381132_34381368
transcript_138548.nnic	chr9	-	760	3	NNC	ENSG00000164972.14	novel	648	4	NA	NA	685	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	726	False	NA	2	True	AATAAA	-20	NA	34380846	34379018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_34379182_34379645_34379733_34380336
transcript_138549.nnic	chr9	-	383	3	NNC	ENSG00000164972.14	novel	648	4	NA	NA	707	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	748	False	NA	2	True	AATAAA	-20	NA	34380824	34379018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_34379182_34379645_34379733_34380691
transcript_13855.nic	chr1	-	1441	6	FSM	ENSG00000118873.17	ENST00000688281.1	1320	6	-121	0	-5	0	multi-exon	FALSE	canonical	3	153	junction_3	16.1691063451262	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCCTTGTTACTAGTGA	6	True	NA	NA	False	AGTAAA	-11	NA	220272488	220210020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_138550.nnic	chr9	-	474	3	NIC	ENSG00000164972.14	novel	712	4	NA	NA	8	0	intron_retention	FALSE	canonical	1	3	junction_2	10	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-20	True	NA	2	True	AATAAA	-20	NA	34381592	34379018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_34379182_34379645_34379733_34381368
transcript_138551.known	chr9	-	293	2	FSM	ENSG00000164972.14	ENST00000481295.5	293	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	1797	False	NA	2	True	AATAAA	-20	NA	34379775	34379018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34379182_34379645
transcript_138554.known	chr9	+	656	4	FSM	ENSG00000122735.16	ENST00000442556.1	656	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACACCTTTAATTGTGC	NA	False	NA	2	True	AATAAA	-17	NA	34513111	34520984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34513192_34514393_34514543_34514639_34514740_34520657
transcript_138555.nnic	chr9	+	577	3	NNC	ENSG00000230729.1	novel	631	3	NA	NA	1807	239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAGTTTACCAGAGTGG	NA	False	NA	NA	False	AATAAA	-12	NA	34523333	34524480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_34523550_34523967_34524125_34524276
transcript_138557.known	chr9	-	1028	2	FSM	ENSG00000168913.7	ENST00000399775.3	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGAGGTTTTCTTCTCTT	-2	True	NA	-5	True	AATAAA	-17	NA	34522990	34521042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34521857_34522776
transcript_138558.known	chr9	-	1092	2	FSM	ENSG00000164967.10	ENST00000297613.4	1092	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCCTGCTATGTGGAG	0	True	NA	-1	True	AATAAA	-26	NA	34612104	34610485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34611333_34611859
transcript_138559.known	chr9	-	872	2	FSM	ENSG00000164967.10	ENST00000378959.9	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTACTCAGCCTGC	7	True	NA	-10	True	AATAAA	-17	NA	34612097	34610494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34611333_34612063
transcript_13856.nic	chr1	-	1516	5	ISM	ENSG00000118873.17	ENST00000688035.1	8184	31	-125	59765	-5	-3	5prime_fragment	FALSE	canonical	3	153	junction_2	15.1657508881031	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGGCCTTGTTACTAG	6	True	NA	NA	False	AGTAAA	-8	NA	220272488	220210023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_138563.known	chr9	-	828	7	FSM	ENSG00000137100.16	ENST00000259632.12	828	7	0	0	0	0	multi-exon	TRUE	canonical	3	309	junction_5	26.8788433944287	3074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGTGCTGGCTTCTTGG	-5	True	NA	-1	True	AATAAA	-18	NA	34620495	34613545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_138564.known	chr9	-	899	7	FSM	ENSG00000137100.16	ENST00000341694.6	899	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	124.716567553081	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGAGTGTGCTGGCTT	16	True	NA	-6	True	AATAAA	-13	NA	34620474	34613550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34613872_34614041_34614199_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_138565.known	chr9	-	713	6	FSM	ENSG00000137100.16	ENST00000477738.6	713	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	129.989845757274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCCCCCCAATCAGTGT	22	True	NA	-59	True	NA	NA	NA	34620468	34613603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34613902_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_138566.known	chr9	-	864	4	FSM	ENSG00000147955.18	ENST00000680244.1	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	509.964704661019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTCCATAGCTCCAC	27	False	34637820	NA	False	NA	NA	NA	34637793	34635317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34635641_34636996_34637090_34637219_34637421_34637546
transcript_138567.known	chr9	-	1672	4	FSM	ENSG00000147955.18	ENST00000277010.9	1672	4	0	0	0	0	multi-exon	TRUE	canonical	3	867	junction_2	162.243301522401	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-30	True	NA	-24	True	AATAAA	-20	NA	34637787	34634721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637546
transcript_138568.known	chr9	-	1582	4	FSM	ENSG00000147955.18	ENST00000353468.4	1582	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	529.777521439162	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	13	True	NA	-24	True	AATAAA	-20	NA	34637744	34634721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34635859_34636996_34637090_34637266_34637421_34637546
transcript_138569.known	chr9	+	1722	13	FSM	ENSG00000137070.19	ENST00000441545.7	1722	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	6.33059151176957	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATCCAATGCTGCTTT	-4	True	NA	29	True	AATAAA	-37	NA	34652184	34661902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34652234_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_138571.known	chr9	+	1728	13	FSM	ENSG00000137070.19	ENST00000318041.13	1728	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	8.86002257333467	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAGAAATTATTATCCA	14	False	NA	19	True	AATAAA	-27	NA	34653934	34661892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34654000_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_138579.known	chr9	+	1756	11	FSM	ENSG00000213930.12	ENST00000378842.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	18.5658288260988	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTAGGGAGTGTGTAGG	1	True	NA	NA	False	GGGGCT	-7	NA	34646674	34651035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_138595.known	chr9	+	1164	9	FSM	ENSG00000213930.12	ENST00000554550.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	64.8401881551866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAATTTGGGCAGATA	-4	True	NA	-33	True	NA	NA	NA	34646635	34650529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34646787_34647088_34647259_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_138604.known	chr9	+	1712	8	FSM	ENSG00000213930.12	ENST00000554638.5	1712	8	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	20.3389643145307	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATTAATAAAACTGTGC	7	True	NA	-13	True	NA	NA	NA	34646680	34650549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34646787_34647088_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_13861.known	chr1	-	1906	2	FSM	ENSG00000118873.17	ENST00000462353.1	1906	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAGTCTGGTCTTAC	7	True	NA	-18	True	AGTAAA	-15	NA	220272361	220265984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220267752_220272222
transcript_138616.known	chr9	-	338	4	FSM	ENSG00000187186.15	ENST00000544078.2	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	21.6384431561566	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCACCGTACTGACC	-2	True	NA	-19	True	ATTAAA	-10	NA	34666028	34665031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34665191_34665313_34665374_34665612_34665681_34665977
transcript_138624.known	chr9	+	1410	3	FSM	ENSG00000230074.4	ENST00000654838.1	1410	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTTTTTTTGAGGCAG	-8	True	NA	NA	False	AAAAAG	-26	NA	34665606	34681981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34665768_34678095_34678269_34680905
transcript_138626.known	chr9	-	879	3	FSM	ENSG00000213927.4	ENST00000557161.1	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTTATTCTCTTTATTC	1978	False	NA	NA	False	AATAAA	-41	NA	34664048	34661879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34662080_34662283_34662417_34663502
transcript_138627.known	chr9	-	465	3	FSM	ENSG00000187186.15	ENST00000416454.5	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_2	25.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCGTACTGACCTCCT	-2	True	NA	-15	True	ATTAAA	-14	NA	34666028	34665027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34665374_34665612_34665681_34665977
transcript_138628.known	chr9	-	477	3	FSM	ENSG00000187186.15	ENST00000423809.5	477	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	117.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCGTACTGACCTCCT	NA	False	NA	-15	True	ATTAAA	-14	NA	34666112	34665027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34665374_34665612_34665681_34666049
transcript_138631.known	chr9	-	3264	5	FSM	ENSG00000261215.1	ENST00000564224.1	3264	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	93.1262583807596	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAGTATAATCTCCAA	-3	True	NA	NA	False	AATAAA	-18	NA	34666029	34661902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34662080_34662283_34665191_34665313_34665374_34665612_34665681_34665977
transcript_138632.known	chr9	+	665	3	FSM	ENSG00000230074.4	ENST00000434627.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCAATCAGGTGTGT	19	False	NA	NA	False	NA	NA	NA	34665664	34681298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34665768_34678099_34678269_34680905
transcript_138639.known	chr9	+	2391	4	FSM	ENSG00000137094.16	ENST00000312316.9	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	27.0678160675491	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	-26	True	NA	23	True	AATAAA	-18	NA	34989693	34998431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34989832_34993199_34993445_34996264_34996867_34997025
transcript_138641.known	chr9	+	3068	4	FSM	ENSG00000137094.16	ENST00000545841.5	3068	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	90.0703428808099	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTAGGTTCAAGCGAC	546	False	NA	NA	False	NA	NA	NA	34990265	34998900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34990612_34993199_34993445_34996264_34996867_34997025
transcript_138642.known	chr9	+	2818	4	FSM	ENSG00000137094.16	ENST00000454002.6	2818	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	83.4918492362511	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGCAGGAGCAACAAAC	530	False	NA	25	True	AATAAA	-20	NA	34990249	34998433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34990813_34993199_34993445_34996264_34996867_34997025
transcript_138647.nnic	chr9	-	1890	4	Fusion	ENSG00000286782.1_ENSG00000287868.1	novel	1999	2	NA	NA	587	640	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTGTCTCAGATATT	2703	False	NA	NA	False	ATTAAA	-15	NA	35024815	35012322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_-_35013650_35014764_35014939_35022531_35022629_35024523
transcript_13865.nnic	chr1	+	463	2	NIC	ENSG00000117791.16	novel	2146	8	NA	NA	348	7	combination_of_known_splicesites	FALSE	canonical	3	67	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGCAAAAATGTTTTTAAA	354	False	NA	15	True	AATAAA	-26	NA	220748669	220784247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_220748804_220783918
transcript_138652.known	chr9	-	3159	17	FSM	ENSG00000165280.18	ENST00000679862.1	3159	17	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_2	779.082430551318	1045	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCACAAGCAGTTTCTAA	0	True	NA	-86	True	NA	NA	NA	35072611	35056633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35057223_35057375_35057528_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
transcript_138655.nic	chr9	-	2465	15	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	73.3618721524627	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-2	True	NA	-21	True	AGTAAA	-13	NA	35080046	35073838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
transcript_13866.known	chr1	+	7287	7	FSM	ENSG00000186205.13	ENST00000366910.10	7287	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	13.5851225815432	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCCCAGCCAACATT	13	True	NA	8	True	AATAAA	-19	NA	220786912	220819659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_220787220_220791490_220791665_220796642_220796806_220797873_220798015_220805051_220805114_220805202_220805275_220813291
transcript_138660.known	chr9	-	2556	14	FSM	ENSG00000221829.10	ENST00000378643.8	2556	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	43.7384642441624	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-11	True	NA	-21	True	AGTAAA	-13	NA	35079942	35073838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_138661.known	chr9	-	2108	13	FSM	ENSG00000221829.10	ENST00000425676.5	2108	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	90.2251427756636	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCTACTACATATACT	5	True	NA	-17	True	AGTAAA	-17	NA	35079693	35073834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078604_35078737_35079150_35079242_35079440
transcript_138662.known	chr9	-	2588	13	FSM	ENSG00000165282.14	ENST00000298004.9	2588	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	47.2848196218053	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	6963	False	NA	-46	True	AATAAA	-16	NA	35096220	35088687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35095878_35095977_35096154
transcript_138663.known	chr9	-	2464	12	FSM	ENSG00000165282.14	ENST00000361778.6	2464	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	32.8799469143566	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-3	True	NA	-47	True	AATAAA	-15	NA	35096601	35088688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_138664.nic	chr9	-	3714	11	NIC	ENSG00000165282.14	novel	2464	12	NA	NA	1	0	intron_retention	FALSE	canonical	3	62	junction_10	23.1734762174344	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-2	True	NA	-47	True	AATAAA	-15	NA	35096600	35088688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_138677.known	chr9	-	1293	9	FSM	ENSG00000165283.16	ENST00000619795.4	1293	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	629.755098728863	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTTGTCTTCAAGAG	9193	False	NA	NA	False	NA	NA	NA	35103195	35099775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35103049
transcript_138692.known	chr9	-	1365	10	FSM	ENSG00000165283.16	ENST00000356493.10	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	1470	junction_9	189.520903436814	5901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCATTTTTGTCTTCAAG	1	True	NA	NA	False	NA	NA	NA	35103131	35099777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_138696.known	chr9	-	2566	10	FSM	ENSG00000005238.20	ENST00000378566.5	2566	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_7	20.2965666378319	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTGTTGTTGTTGT	16	True	NA	0	True	AATAAA	-30	NA	35115850	35104111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35107569_35108127_35108350_35108593_35108738_35115670
transcript_138701.known	chr9	-	2998	9	FSM	ENSG00000005238.20	ENST00000322813.10	2998	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	16.1690290370201	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACTTTTGTTGTTGTT	4	True	NA	-5	True	AATAAA	-25	NA	35115862	35104116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115804
transcript_138704.nic	chr9	+	1862	7	ISM	ENSG00000198722.15	ENST00000634487.1	5063	42	-153	144001	-41	16703	5prime_fragment	FALSE	canonical	3	181	junction_5	12.4632793972266	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAACCAAGTGTG	NA	False	NA	NA	False	NA	NA	NA	35161950	35260053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992
transcript_138708.nnic	chr9	+	1327	3	NNC	ENSG00000179766.19	novel	2869	18	NA	NA	23999	-8455	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGGAGCAGTCAATGT	NA	False	NA	NA	False	AATAAA	-13	NA	35457705	35471828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_35458043_35469143_35469325_35471019
transcript_138710.known	chr9	+	5218	12	FSM	ENSG00000198853.12	ENST00000361226.8	5218	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	9.18856637708602	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTTCTCTTTGTGTTCC	-8	True	NA	18	True	AATAAA	-21	NA	35490110	35561895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35490173_35546429_35548536_35555059_35555702_35555951_35556138_35556307_35556449_35557913_35557991_35558196_35558372_35558461_35558568_35559225_35559273_35560028_35560852_35560959_35561098_35561180
transcript_138711.known	chr9	-	1703	1	FSM	ENSG00000288586.1	ENST00000673624.1	1703	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTTCTGGCCCTTTATC	NA	False	NA	NA	False	NA	NA	NA	35605139	35603436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35603400_35605100
transcript_138715.nnic	chr9	-	1460	7	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	1139	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	5.37742193496723	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACGTGTTAGTCTCATG	2330	False	NA	-27	True	TTTAAA	-4	NA	35617214	35609981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35610301_35610601_35610754_35611803_35611920_35612847_35612994_35615942_35616279_35616599_35616690_35616913
transcript_138719.nnic	chr9	-	925	3	NNC	ENSG00000137101.14	novel	675	4	NA	NA	-49	-23815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCTGGTCCATGTTTGT	-18	True	NA	1	True	ATTAAA	-14	NA	35646859	35640753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35641336_35646402_35646618_35646731
transcript_138720.known	chr9	-	1317	5	NNC	ENSG00000137078.10	novel	1222	5	NA	NA	-19	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	17.2970373185699	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGTTTAGATTTTTA	-14	True	NA	-25	True	AATAAA	-8	NA	35650950	35649302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35650082_35650183_35650246_35650356_35650415_35650416_35650638_35650753
transcript_138722.known	chr9	-	1222	5	FSM	ENSG00000137078.10	ENST00000259608.8	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2.5	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATTTTTACCTAGAAG	5	True	NA	-17	True	AATAAA	-16	NA	35650931	35649294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650501_35650638_35650753
transcript_138723.known	chr9	-	933	4	FSM	ENSG00000137078.10	ENST00000474403.1	933	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	17.7951304200522	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCTGGAACTTAGAGACG	26	True	NA	NA	False	NA	NA	NA	35650910	35649426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650753
transcript_138727.nic	chr9	+	1153	9	ISM	ENSG00000107159.14	ENST00000378357.9	1546	11	1761	0	-474	0	3prime_fragment	FALSE	canonical	1	2	junction_1	2.43669858620224	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTAGTCACCTTTGT	1666	False	NA	NA	False	AATAAA	-15	NA	35675688	35681159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_35675932_35676063_35676207_35676296_35676390_35677789_35677857_35679184_35679343_35679853_35679999_35680112_35680140_35680752_35680835_35680964
transcript_138731.known	chr9	-	3678	9	FSM	ENSG00000137135.18	ENST00000378387.4	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	25.7023223658875	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCACATCTACCTGGG	3	True	NA	-1	True	ATTAAA	-18	NA	35665195	35659342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_138734.nic	chr9	-	1521	8	NIC	ENSG00000137135.18	novel	3678	9	NA	NA	-63	85	combination_of_known_junctions	FALSE	canonical	2	22	junction_3	77.4549243503759	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCTTCTGTCTCAGTTTT	NA	False	NA	-4	True	AGTAAA	-25	NA	35665258	35661433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_35662003_35662178_35662268_35662511_35662742_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_138738.known	chr9	+	697	7	FSM	ENSG00000107159.14	ENST00000493245.1	697	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.7938424357067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATATTTATAATAAA	2140	False	NA	NA	False	AAGAAA	-8	NA	35676162	35681138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35676207_35677789_35677857_35679184_35679343_35679853_35679999_35680112_35680140_35680752_35680835_35680964
transcript_13874.nnic	chr1	+	508	2	Antisense	novelGene_ENSG00000234754.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACTCCAACTCATTCTC	NA	False	NA	4	True	ATTAAA	-28	NA	221308864	221491195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_221309058_221490880
transcript_138743.known	chr9	+	1173	6	FSM	ENSG00000159884.12	ENST00000378409.7	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	46.4990322479942	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACATAAAAATAGCCACA	-31	True	NA	NA	False	AATAAA	-16	NA	35658289	35661499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745_35660859_35660939
transcript_138747.known	chr9	+	1264	5	FSM	ENSG00000159884.12	ENST00000426546.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_4	14.7054411698527	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCACATTTACAAAGCTG	-29	True	NA	NA	False	AATAAA	-28	NA	35658291	35661511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745
transcript_138748.known	chr9	+	899	5	FSM	ENSG00000159884.12	ENST00000378407.7	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	76.3053078101386	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTGCTCCTGTGTGTT	-17	True	NA	14	True	ACTAAA	-19	NA	35658303	35661186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660773
transcript_138749.nnic	chr9	+	621	5	NNC	ENSG00000159884.12	novel	1264	5	NA	NA	4	4422	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	77.593089254134	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGTGGTTTTTATCT	-25	True	NA	NA	False	AATAAA	-24	NA	35658295	35665933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35665806
transcript_138751.known	chr9	+	1016	4	FSM	ENSG00000159884.12	ENST00000378406.5	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	11.6714276000077	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTGCTCCTGTGTGTTT	-7	True	NA	15	True	ACTAAA	-20	NA	35658313	35661187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556
transcript_138753.known	chr9	+	1324	3	FSM	ENSG00000159884.12	ENST00000421582.2	1324	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	14	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCATAGCAAAACTGAGA	-4	True	NA	NA	False	NA	NA	NA	35658316	35661403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400
transcript_138754.known	chr9	+	804	6	FSM	ENSG00000159884.12	ENST00000327351.6	804	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	76.2810592480204	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCATGATGGAGTGCTC	-4	True	NA	5	True	ACTAAA	-10	NA	35658316	35661177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660765_35660859_35660939
transcript_138755.known	chr9	-	1018	9	FSM	ENSG00000198467.16	ENST00000329305.6	1018	9	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_4	88.2662874488329	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	7469	False	NA	-22	True	AATAAA	-17	NA	35689913	35682013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_138756.known	chr9	-	1182	9	FSM	ENSG00000198467.16	ENST00000378292.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	284.793099240484	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGTTGGCAATGGA	9911	False	NA	-1	True	AATAAA	-38	NA	35690056	35681992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_138763.known	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000645482.3	1190	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	257.060304208954	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	0	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_138764.known	chr9	-	1185	9	FSM	ENSG00000198467.16	ENST00000647435.1	1185	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	341.45495218989	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTCCATGCTGTTTT	0	True	NA	-18	True	AATAAA	-8	NA	35689925	35682936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_138765.known	chr9	-	8623	57	FSM	ENSG00000137076.21	ENST00000314888.10	8623	57	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_20	47.8185211961616	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGTAAGTGTCTGAG	179	False	35732211	NA	False	NA	NA	NA	35732195	35696947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35697917_35698043_35698173_35698322_35698506_35698616_35698680_35698807_35698934_35699031_35699157_35699355_35699462_35699973_35700082_35700190_35700377_35703559_35703677_35703774_35703901_35703990_35704175_35704331_35704499_35704668_35704816_35705550_35705671_35705749_35705852_35705961_35706112_35706195_35706367_35706449_35706552_35706767_35706901_35707071_35707254_35707347_35707489_35707730_35707893_35708340_35708485_35710560_35710684_35710796_35710887_35710988_35711083_35711254_35711395_35711594_35711793_35712004_35712125_35712834_35713044_35713195_35713299_35713952_35714082_35714238_35714374_35714573_35714688_35714759_35714877_35715058_35715188_35716389_35716557_35717145_35717441_35717618_35717787_35718811_35718911_35719073_35719283_35719518_35719628_35719739_35719854_35720038_35720220_35720432_35720510_35720811_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_138771.nnic	chr9	-	423	2	NNC	ENSG00000137076.21	novel	8623	57	NA	NA	-45	-5948	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTATTATCTCTAT	13	True	NA	-12	True	AATAAA	-14	NA	35732149	35729051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35729400_35732074
transcript_138772.known	chr9	-	3611	17	FSM	ENSG00000070610.14	ENST00000378103.7	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	235	junction_14	60.6096307838119	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-23	True	NA	-4	True	AATAAA	-16	NA	35749228	35736865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
transcript_138776.known	chr9	+	1496	8	FSM	ENSG00000107175.12	ENST00000486056.1	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_4	26.6236046870181	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGGCTTTCTGGGTCT	-22	True	NA	13	True	NA	NA	NA	35732597	35736860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35732902_35732995_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_138777.known	chr9	+	1496	9	FSM	ENSG00000107175.12	ENST00000353704.3	1496	9	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_5	25.1044692236263	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTAGGTCACCCTCA	0	True	NA	4	True	AATAAA	-14	NA	35732665	35736999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35732902_35732995_35733144_35733214_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_138778.known	chr9	-	717	3	FSM	ENSG00000070610.14	ENST00000485259.1	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGGCCTGTGAAAGGGAG	9978	False	NA	NA	False	AAAAAG	-6	NA	35744391	35741319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35741891_35743275_35743327_35744296
transcript_138780.known	chr9	+	7028	9	FSM	ENSG00000107185.10	ENST00000378078.5	7028	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	1.61535599791501	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAATGTCT	-27	True	NA	NA	False	AATGAA	-9	NA	35749286	35758585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35749409_35749736_35749872_35750242_35750380_35750657_35750742_35750839_35750990_35751265_35751413_35751626_35751755_35751955_35752146_35752650
transcript_138782.known	chr9	-	677	3	FSM	ENSG00000215183.5	ENST00000436428.3	677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGACTCTCACTGTCCAC	-7	True	NA	2	True	AATAAA	-19	NA	35754276	35752989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35753281_35753659_35753769_35753999
transcript_138783.known	chr9	-	515	3	FSM	ENSG00000215183.5	ENST00000414286.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCTCACTGTCC	533	False	NA	0	True	AATAAA	-17	NA	35756613	35752991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35753281_35753659_35753769_35756496
transcript_138784.known	chr9	-	696	2	FSM	ENSG00000228843.2	ENST00000425499.2	696	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCTTGCAAGAGCAGAAG	NA	False	NA	NA	False	NA	NA	NA	35757940	35756711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35757195_35757727
transcript_138785.nnic	chr9	+	386	2	NNC	ENSG00000107185.10	novel	7028	9	NA	NA	7909	-645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACAATCTAATTCAATATT	241	False	NA	12	True	AATAAA	-21	NA	35757199	35757940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_35757376_35757730
transcript_138793.nnic	chr9	+	747	4	Fusion	ENSG00000107185.10_ENSG00000227388.3	novel	472	3	NA	NA	7444	0	multi-exon	FALSE	canonical	2	5	junction_1	7.58653778449403	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATTGTCCTTAATTTC	7370	False	NA	11	True	AATAAA	-20	NA	35756734	35790432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_+_35756862_35772162_35772377_35786646_35786776_35790155
transcript_138795.nnic	chr9	+	414	4	Fusion	ENSG00000107185.10_ENSG00000227388.3	novel	1534	2	NA	NA	7446	-6	multi-exon	FALSE	canonical	1	3	junction_3	8.37987005998436	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAAGTGGCATTGTCCTT	7372	False	NA	5	True	AATAAA	-14	NA	35756736	35790426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_+_35756862_35786646_35786776_35790155_35790268_35790378
transcript_138798.nnic	chr9	+	531	3	Fusion	ENSG00000107185.10_ENSG00000227388.3	novel	1534	2	NA	NA	7446	0	multi-exon	FALSE	canonical	2	9	junction_1	7	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATTGTCCTTAATTTC	7372	False	NA	11	True	AATAAA	-20	NA	35756736	35790432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_+_35756862_35786646_35786776_35790155
transcript_138803.known	chr9	-	1716	7	FSM	ENSG00000137098.14	ENST00000396638.7	1716	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.06718737290547	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGAGTCACTGTGTGC	-4	True	NA	18	True	CATAAA	-37	NA	35812262	35809794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35810133_35810246_35810310_35810438_35810554_35810636_35810683_35810882_35811058_35811181_35812002_35812103
transcript_138809.known	chr9	-	569	5	FSM	ENSG00000137133.11	ENST00000472085.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	213.935738014947	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	6	True	NA	-2	True	AATAAA	-16	NA	35814992	35812959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813520_35813643_35813785_35814898
transcript_138810.known	chr9	-	649	5	FSM	ENSG00000137133.11	ENST00000259667.6	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	20.2113829314077	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	2	True	NA	-2	True	AATAAA	-16	NA	35815042	35812959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35814898
transcript_138811.known	chr9	-	853	5	FSM	ENSG00000137133.11	ENST00000474848.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	192.445446815455	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	NA	False	NA	-2	True	AATAAA	-16	NA	35815354	35812959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815006
transcript_138812.nnic	chr9	-	863	5	NNC	ENSG00000137133.11	novel	853	5	NA	NA	-132	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_4	199.357091672205	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	NA	False	NA	-2	True	AATAAA	-16	NA	35815486	35812959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815128
transcript_138815.nic	chr9	+	850	4	ISM	ENSG00000137103.20	ENST00000439587.6	2150	11	16677	0	16128	0	3prime_fragment	FALSE	canonical	3	55	junction_2	18.6607133363712	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCACACTCTGTCCA	NA	False	NA	19	True	AATAAA	-18	NA	35845904	35847235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_35846069_35846257_35846382_35846468_35846612_35846816
transcript_138824.known	chr9	+	1717	9	FSM	ENSG00000122707.12	ENST00000479053.1	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	68.1311923791152	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCGCTACTGTACTATT	3	True	NA	30	True	ATTAAA	-27	NA	36036939	36086195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085174
transcript_138825.nnic	chr9	+	1629	9	NNC	ENSG00000122707.12	novel	1717	9	NA	NA	3	4	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_8	70.2424373153438	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGTCAGAGTTCGCTA	-10	True	NA	20	True	ATTAAA	-17	NA	36036926	36086185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085265
transcript_138826.nic	chr9	+	989	9	NIC	ENSG00000122707.12	novel	1128	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_8	61.5912686587961	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATATCTTGTCAGAGTTC	-10	True	NA	16	True	ATTAAA	-13	NA	36036926	36086181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085901
transcript_13883.nnic	chr1	+	770	3	NNC	ENSG00000286398.1	novel	342	2	NA	NA	-240497	116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGATATTTGCAAATTAATC	NA	False	NA	NA	False	AATAAA	-28	NA	221308864	221554430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_221309058_221490880_221491114_221554086
transcript_138830.known	chr9	+	1895	5	FSM	ENSG00000122694.16	ENST00000377960.9	1895	5	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_1	13.7727085208393	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCCAATGTGATT	10	True	NA	18	True	AATAAA	-19	NA	36136732	36163906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36150871_36150950_36162361
transcript_138837.known	chr9	+	812	4	FSM	ENSG00000122694.16	ENST00000377959.5	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	113.620225116638	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGCGTCGTAATCTA	19	True	NA	NA	False	NA	NA	NA	36136741	36162910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36162361
transcript_138842.nnic	chr9	+	989	5	NNC	ENSG00000122705.17	novel	1181	6	NA	NA	-208	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	690.565348102553	2114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	NA	False	NA	30	True	AATAAA	-19	NA	36190647	36212059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_36190912_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_138843.known	chr9	+	1078	5	FSM	ENSG00000122705.17	ENST00000345519.10	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	71.8692388995459	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	-18	True	NA	30	True	AATAAA	-19	NA	36190920	36212059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_138854.known	chr9	-	5104	11	FSM	ENSG00000137075.18	ENST00000350199.8	5104	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	43.7704238042082	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTGTTGTGTTTCA	334	False	NA	-9	True	AATAAA	-17	NA	36400923	36336403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36400553
transcript_138872.known	chr9	+	1966	16	FSM	ENSG00000165304.8	ENST00000626154.2	1966	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	133.067334667662	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCATTGGAACTACCA	35	True	NA	NA	False	CATAAA	-25	NA	36572929	36677417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607578_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_138878.known	chr9	+	2125	15	FSM	ENSG00000165304.8	ENST00000536987.5	2125	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	133.975801196046	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	0	True	NA	-53	True	AATAAA	-16	NA	36572894	36677681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_13888.known	chr1	-	2589	4	FSM	ENSG00000143507.18	ENST00000366899.4	2589	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	3.29983164553722	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGATGTGTCTTTTTTT	-3	True	NA	-16	True	TATAAA	-10	NA	221742089	221701423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_221702678_221706094_221706467_221738933_221739788_221741980
transcript_138888.known	chr9	+	2452	18	FSM	ENSG00000165304.8	ENST00000298048.7	2452	18	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	82.5116957212482	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	0	True	NA	-52	True	AATAAA	-17	NA	36572894	36677682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_138889.known	chr9	+	2400	17	FSM	ENSG00000165304.8	ENST00000543751.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	91.5686004793674	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_138890.known	chr9	+	2342	17	FSM	ENSG00000165304.8	ENST00000536860.5	2342	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	109.831618284536	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_138891.known	chr9	+	2363	17	FSM	ENSG00000165304.8	ENST00000541717.4	2363	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	111.530527631452	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	-33	True	NA	-51	True	AATAAA	-18	NA	36572861	36677683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_138892.known	chr9	+	2236	16	FSM	ENSG00000165304.8	ENST00000545008.5	2236	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	114.416471230714	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	2	True	NA	-53	True	AATAAA	-16	NA	36572896	36677681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_138893.known	chr9	+	4067	3	FSM	ENSG00000281649.3	ENST00000664382.1	4067	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTCAGAGAAGGCAAACC	-6	True	NA	-5	True	AATAAA	-3	NA	37079873	37090378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080035_37080341_37080537_37086667
transcript_138894.known	chr9	+	311	2	FSM	ENSG00000281649.3	ENST00000625218.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAATCAGTGTTTGATCC	29	False	NA	NA	False	NA	NA	NA	37079934	37086874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080039_37086667
transcript_138896.known	chr9	+	636	2	FSM	ENSG00000281649.3	ENST00000631093.1	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAGAAGCAATTCAAGAC	2	True	NA	NA	False	NA	NA	NA	37079907	37087176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080035_37086667
transcript_138898.known	chr9	+	579	2	FSM	ENSG00000281649.3	ENST00000627197.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCGTGCCAGCAGTCT	31	False	NA	NA	False	NA	NA	NA	37079936	37087152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080031_37086667
transcript_13890.known	chr1	-	1009	3	FSM	ENSG00000143507.18	ENST00000477026.5	1009	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTTCTCCCCCTTTT	-3	True	NA	-27	True	AATAAA	-11	NA	221742089	221702149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_221702678_221706094_221706467_221741980
transcript_138900.known	chr9	+	4520	2	FSM	ENSG00000281649.3	ENST00000625445.1	4520	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTACCCTCTTTCT	NA	False	NA	3	True	AATATA	-19	NA	37079856	37090507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080537_37086667
transcript_138902.known	chr9	-	964	1	FSM	ENSG00000260100.1	ENST00000569583.1	964	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTATACTTGTTCTTTC	NA	False	NA	NA	False	ATTAAA	-16	NA	37079776	37078812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37078800_37079800
transcript_138904.known	chr9	+	2584	9	FSM	ENSG00000147905.18	ENST00000336755.10	2584	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	30.4689903836671	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	-18	True	NA	15	True	AATAAA	-16	NA	37120573	37358149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_138911.nnic	chr9	+	2803	9	NIC	ENSG00000147905.18	novel	2793	9	NA	NA	-66	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	42.1893055169198	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	14	True	NA	15	True	AATAAA	-16	NA	37120507	37358149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_37120777_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_138937.known	chr9	+	1080	9	FSM	ENSG00000137106.18	ENST00000460882.5	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	141.939192526236	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGGATCCACAGGCAG	-7	True	NA	NA	False	NA	NA	NA	37422695	37436848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_138946.known	chr9	+	1136	5	FSM	ENSG00000137106.18	ENST00000493368.5	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	174.449132987241	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGAACAGCCCTGCCTC	98	False	NA	NA	False	NA	NA	NA	37422665	37429158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483
transcript_138952.known	chr9	+	1250	9	FSM	ENSG00000137106.18	ENST00000318158.11	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	65.2369479283021	3091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCTTGGCCTGTAAAT	-7	True	NA	11	True	ATTAAA	-14	NA	37422695	37436990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_138953.known	chr9	+	597	4	FSM	ENSG00000137106.18	ENST00000482603.1	597	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	262.344557150833	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATATAACTCGTGCCAGT	7083	False	NA	NA	False	ATTAAA	-16	NA	37429785	37432811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37429837_37430510_37430647_37432007_37432139_37432532
transcript_138954.known	chr9	+	1704	9	FSM	ENSG00000137106.18	ENST00000607784.1	1704	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	188.964116964042	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAGCAACCAAAAACCAT	43	False	NA	NA	False	NA	NA	NA	37422745	37434879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37434045
transcript_138956.known	chr9	-	4690	2	FSM	ENSG00000168795.5	ENST00000307750.5	4690	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTCTTTTTCTTTAC	-21	True	NA	0	True	AATAAA	-27	NA	37465450	37438101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37442556_37465214
transcript_13896.nnic	chr1	+	944	3	NNC	ENSG00000228437.5	novel	455	3	NA	NA	-220	-11548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7591	False	NA	18	True	AATAAA	-22	NA	221966120	221971595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_221966503_221968347_221968497_221971182
transcript_138961.known	chr9	+	1805	13	FSM	ENSG00000137054.16	ENST00000442009.6	1805	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.2092482098988	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCACAGAGTGAGACCTTG	-19	True	NA	NA	False	NA	NA	NA	37485947	37503553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492281_37492376_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_138966.known	chr9	+	1855	12	FSM	ENSG00000137054.16	ENST00000377798.9	1855	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	5.9153812672718	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTGGTATTAT	-19	True	NA	14	True	TATAAA	-23	NA	37485947	37503697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_13897.nnic	chr1	+	800	3	NNC	ENSG00000228437.5	novel	455	3	NA	NA	-220	-10437	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	5.5	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTCTACTCTTTTCGT	7591	False	NA	11	True	AATAAA	-18	NA	221966120	221972706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_221966503_221968347_221968497_221972437
transcript_138973.nnic	chr9	-	1407	4	NNC	ENSG00000122696.14	novel	1871	4	NA	NA	-10	31535	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.1928941054479	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGATTGTTCATTGCT	-23	True	NA	NA	False	ATTAAA	-17	NA	37904137	37847864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_37848966_37881517_37881632_37899828_37899951_37904067
transcript_138975.known	chr9	-	4702	11	FSM	ENSG00000147912.13	ENST00000432825.7	4702	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	8.84081444212014	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGAAGCCTTTCCTTA	-1	True	NA	0	True	AATAAA	-23	NA	37576380	37510891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37512722_37515903_37516086_37518124_37518439_37521568_37521839_37522824_37522978_37525101_37525173_37529123_37529261_37531908_37532059_37537109_37537944_37541183_37541775_37576210
transcript_138976.known	chr9	-	351	3	FSM	ENSG00000147912.13	ENST00000544208.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	29.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTACTCAGCCCTTT	4110	False	NA	NA	False	AATAAA	-15	NA	37525157	37522346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37522489_37522824_37522978_37525101
transcript_138977.known	chr9	-	635	2	FSM	ENSG00000175768.13	ENST00000544379.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGTAAATAATGTCAAA	-5	True	NA	50	True	NA	NA	NA	37592596	37588641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37588933_37592252
transcript_138978.known	chr9	-	789	2	FSM	ENSG00000175768.13	ENST00000401811.3	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTAGTCTATGTTT	-13	True	NA	41	True	NA	NA	NA	37592604	37588457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37588933_37592290
transcript_138981.known	chr9	-	706	2	FSM	ENSG00000175768.13	ENST00000321301.7	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	4473	junction_1	0	11666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-6	True	NA	86	True	AATAAA	-18	NA	37592597	37588412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37588933_37592411
transcript_138985.known	chr9	+	2293	9	FSM	ENSG00000165275.10	ENST00000297994.4	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.3474060048428	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTAAGTCTGTCTT	-6	True	NA	8	True	ATTAAA	-17	NA	37753804	37778972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_138989.known	chr9	+	1443	9	FSM	ENSG00000165275.10	ENST00000488673.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	18.7812240016459	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCAGCTGCAGGAG	6	True	NA	-8	True	AATAAA	-5	NA	37753816	37778022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763866_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_13899.nic	chr1	+	3501	2	ISM	ENSG00000228437.5	ENST00000421147.5	455	3	-91	11548	-91	-11548	5prime_fragment	FALSE	canonical	3	14	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7720	False	NA	18	True	AATAAA	-22	NA	221966249	221971595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_221966503_221968347
transcript_13900.nnic	chr1	+	695	2	NNC	ENSG00000228437.5	novel	455	3	NA	NA	-120	-11548	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7691	False	NA	18	True	AATAAA	-22	NA	221966220	221971595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_221966503_221971182
transcript_139006.known	chr9	-	535	4	FSM	ENSG00000107371.14	ENST00000489414.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	245.478218087788	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGTTGATATAGGTG	NA	False	NA	NA	False	AAGAAA	-20	NA	37800709	37780690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37800666
transcript_139018.known	chr9	-	1813	4	FSM	ENSG00000107371.14	ENST00000327304.10	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_2	82.5927088522683	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTCGTGTGTTTCTAA	-3	True	NA	NA	False	GATAAA	-7	NA	37785064	37779713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37784720
transcript_13902.known	chr1	-	1966	12	FSM	ENSG00000143498.18	ENST00000350027.8	1966	12	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_1	27.8627094610771	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-13	True	NA	NA	False	NA	NA	NA	222589933	222557901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_222558269_222558622_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_139022.known	chr9	-	1871	4	FSM	ENSG00000122696.14	ENST00000496760.5	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	4.92160768674447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAGTAGCAAACTGAG	3	True	NA	-1	True	AATAAA	-18	NA	37904353	37879399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37880749_37881517_37881632_37899828_37899951_37904067
transcript_139027.nnic	chr9	-	671	3	NNC	ENSG00000122696.14	novel	1871	4	NA	NA	-56	11667	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGCACACTGCATTCT	7778	False	NA	NA	False	AATAAA	-24	NA	37904183	37867732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_37868166_37899828_37899951_37904067
transcript_139028.nnic	chr9	-	1638	3	NNC	ENSG00000122696.14	novel	1871	4	NA	NA	0	-2493	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTTGGTCTTCTCTTA	-13	True	NA	-3	True	AATAAA	-19	NA	37904127	37881892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_37883349_37899828_37899951_37904067
transcript_139029.known	chr9	-	1171	3	FSM	ENSG00000122696.14	ENST00000242275.7	1171	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTTGGCCTCTTTTTT	-13	True	NA	-20	True	AATAGA	-15	NA	37904127	37887603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37888593_37899828_37899951_37904067
transcript_139036.known	chr9	-	6035	6	FSM	ENSG00000107338.10	ENST00000377707.4	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	10.2449987798926	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTTGTCTTTTTTTTTTC	14	True	NA	-5	True	AATATA	-19	NA	38069227	37915897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37920005_37948634_37948755_37955882_37956055_37974621_37974838_38016010_38016132_38067928
transcript_139037.known	chr9	+	584	3	FSM	ENSG00000137124.8	ENST00000635162.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAAGAGTCTTACGCCTT	-27	True	NA	NA	False	NA	NA	NA	38392711	38396138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_38392808_38394476_38394566_38395739
transcript_139039.known	chr9	+	3028	2	FSM	ENSG00000137124.8	ENST00000377698.4	3028	2	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTCCATATTG	-37	True	NA	22	True	AATAAA	-22	NA	38392701	38398661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_38392808_38395739
transcript_139040.known	chr9	-	3566	5	FSM	ENSG00000137142.5	ENST00000377694.2	3566	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_4	31.2969647090577	324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTGGTGTCTTTGTT	-1	True	NA	-4	True	AATAAA	-15	NA	38424454	38406527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_38409218_38411390_38411550_38413236_38413354_38414093_38414204_38423964
transcript_139048.nnic	chr9	-	1684	11	NNC	ENSG00000180071.20	novel	3971	16	NA	NA	-125	4891	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	3.16385840391128	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATTCAGGAAATTAAAAG	1795	False	NA	NA	False	AATAAA	-29	NA	38620721	38596277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_38596404_38601130_38601202_38603158_38603213_38604152_38604288_38604862_38604917_38607425_38607494_38610272_38610411_38611214_38611322_38615593_38615768_38615929_38616045_38620079
transcript_139049.nnic	chr9	-	1632	11	NNC	ENSG00000180071.20	novel	3971	16	NA	NA	-70	4891	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.02988833592198	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATTCAGGAAATTAAAAG	1850	False	NA	NA	False	AATAAA	-29	NA	38620666	38596277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_38596404_38601130_38601205_38603158_38603213_38604152_38604288_38604862_38604917_38607425_38607494_38610272_38610411_38611214_38611322_38615593_38615768_38615929_38616045_38620079
transcript_139054.nnic	chr9	-	1758	9	NNC	ENSG00000180071.20	novel	3971	16	NA	NA	-409	-2003	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	3.25720355519885	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGTGCAAAAGGTAAGAC	1511	False	NA	NA	False	AAAAAG	-5	NA	38621005	38603171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_38603213_38604152_38604288_38604862_38604917_38607425_38607494_38610272_38610411_38611214_38611322_38615593_38615768_38615929_38616045_38620079
transcript_139062.nnic	chr9	-	1426	3	NNC	ENSG00000106714.18	novel	4986	23	NA	NA	7399	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	15.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACTAATTCCTTTTCTA	NA	False	NA	-1	True	ATTAAA	-18	NA	39078749	39072766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_39074012_39078384_39078457_39078640
transcript_139064.nic	chr9	-	1203	3	ISM	ENSG00000106714.18	ENST00000377656.6	4986	23	209510	218	7355	-218	3prime_fragment	FALSE	canonical	3	19	junction_2	7	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCTTACACAGAGTTAT	NA	False	NA	NA	False	ACTAAA	-22	NA	39078793	39072984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_39074012_39078384_39078457_39078689
transcript_139066.known	chr9	-	826	3	FSM	ENSG00000278175.5	ENST00000667968.2	902	3	61	15	0	-13	multi-exon	FALSE	canonical	3	34	junction_1	4	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	0	True	NA	NA	False	AATAAA	-15	NA	39810062	39803495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39803860_39809485_39809616_39809730
transcript_139067.known	chr9	-	1845	3	FSM	ENSG00000278175.5	ENST00000627065.3	1884	3	39	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	15.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAAGTAGAGGCTTCAGT	NA	False	NA	NA	False	AAGAAA	-30	NA	39810089	39807405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39808762_39809485_39809616_39809730
transcript_139069.known	chr9	-	1397	2	FSM	ENSG00000278175.5	ENST00000670314.1	1397	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	-10	True	NA	NA	False	AATAAA	-21	NA	39810072	39808560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39809616_39809730
transcript_139071.known	chr9	-	694	2	FSM	ENSG00000278175.5	ENST00000666906.2	1012	2	305	13	96	-13	multi-exon	FALSE	canonical	3	34	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	247	False	NA	NA	False	AATAAA	-15	NA	39809815	39803495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39803860_39809485
transcript_139073.nnic	chr9	-	2071	4	NIC	ENSG00000204837.5	novel	1739	5	NA	NA	-373	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	6.23609564462324	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTGTTTCATATGCTT	NA	False	NA	NA	False	TATAAA	-17	NA	39874579	39816542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_39817730_39818820_39818925_39863832_39863943_39873909
transcript_139074.nnic	chr9	-	2015	4	NIC	ENSG00000204837.5	novel	1739	5	NA	NA	-373	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	6.23609564462324	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874579	39816598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_39817730_39818820_39818925_39863832_39863943_39873909
transcript_139075.known	chr9	-	1888	3	FSM	ENSG00000283886.3	ENST00000622735.2	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874562	39816598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39817730_39818820_39818925_39873909
transcript_139079.nnic	chr9	-	774	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	-4	-107855	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTGATACCATTTCCA	6	True	NA	NA	False	AATAAA	-19	NA	40106615	40091647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_40092164_40106357
transcript_139084.nnic	chr9	+	1560	7	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	-14	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	17.1796067734069	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	NA	False	NA	5	True	AATAAA	-32	NA	40992230	41014136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_139089.nnic	chr9	+	1301	7	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	-51	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	18.1972220102105	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	NA	False	NA	5	True	AATAAA	-32	NA	40992193	41014136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_139090.nnic	chr9	+	1219	7	NIC	ENSG00000276291.6	novel	1068	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	22.1566393360245	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTTCTACAATATATGT	4	True	NA	14	True	AATAAA	-27	NA	40992259	41057231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41032833_41033023_41056954
transcript_139092.nnic	chr9	+	1404	6	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	16.5093912667912	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	5	True	NA	5	True	AATAAA	-32	NA	40992260	41014136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_139096.nnic	chr9	+	1110	6	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	-1	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	18.0820352836731	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	3	True	NA	5	True	AATAAA	-32	NA	40992258	41014136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_139105.nnic	chr9	+	1261	5	NNC	ENSG00000276291.6	novel	1307	6	NA	NA	-11	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	13.6816482925121	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	NA	False	NA	5	True	AATAAA	-32	NA	40992233	41014136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41011616_41011731_41013780
transcript_139111.nnic	chr9	+	926	5	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	23.4773827331754	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	5	True	NA	5	True	AATAAA	-32	NA	40992260	41014136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992480_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_139115.known	chr9	+	576	4	ISM	ENSG00000276291.6	ENST00000610803.5	1068	7	1	25475	0	-4360	5prime_fragment	FALSE	canonical	3	22	junction_1	20.3141986469235	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAACCAAAGGCAAAGAA	5	True	NA	NA	False	NA	NA	NA	40992260	41007547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439
transcript_139117.nnic	chr9	+	1105	4	NNC	ENSG00000276291.6	novel	994	5	NA	NA	-37	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	9.10433352249844	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	NA	False	NA	5	True	AATAAA	-32	NA	40992207	41014136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40994632_40994700_41011616_41011731_41013780
transcript_139118.nic	chr9	+	747	3	ISM	ENSG00000276291.6	ENST00000690347.1	2139	9	1	41264	1	-534	5prime_fragment	FALSE	canonical	3	30	junction_1	12	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGATGAAGAAACCCAG	-10	True	NA	NA	False	AAAAAG	-23	NA	40992245	40994667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_40992776_40993252_40993435_40994632
transcript_139119.nic	chr9	+	503	3	ISM	ENSG00000276291.6	ENST00000684885.1	816	4	-67	534	-51	-534	5prime_fragment	FALSE	canonical	3	22	junction_1	16	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAGATGAAGAAACCCAG	NA	False	NA	NA	False	AAAAAG	-23	NA	40992193	40994667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_40992480_40993252_40993435_40994632
transcript_13912.known	chr1	-	1910	11	FSM	ENSG00000143498.18	ENST00000352967.9	1910	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	19.29144888286	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-13	True	NA	-4	True	AATAAA	-24	NA	222589933	222558311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_139120.nic	chr9	+	951	2	ISM	ENSG00000276291.6	ENST00000690347.1	2139	9	-238	42497	-238	267	5prime_fragment	FALSE	canonical	3	30	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCCTGAATGAATGTG	NA	False	NA	NA	False	AATAAA	-7	NA	40992006	40993434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_40992776_40993252
transcript_139121.nic	chr9	+	468	2	ISM	ENSG00000276291.6	ENST00000684885.1	816	4	-67	1767	-51	267	5prime_fragment	FALSE	canonical	3	22	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCCTGAATGAATGTG	NA	False	NA	NA	False	AATAAA	-7	NA	40992193	40993434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_40992480_40993252
transcript_13913.nnic	chr1	-	1818	11	NNC	ENSG00000143498.18	novel	1910	11	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.5923192974969	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	NA	False	NA	-4	True	AATAAA	-24	NA	222589961	222558311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569629_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_139154.nic	chr9	-	1829	15	NIC	ENSG00000215126.11	novel	1554	16	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_7	363.55966862822	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	NA	False	NA	NA	False	AATAAA	-16	NA	41189446	41131308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_13916.nic	chr1	-	1824	10	NIC	ENSG00000143498.18	novel	1910	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_7	22.6175939382498	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	NA	False	NA	-4	True	AATAAA	-24	NA	222589961	222558311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222584127_222584298_222588442_222588566_222589726
transcript_139160.nic	chr9	-	1391	15	NIC	ENSG00000215126.11	novel	2433	17	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_7	363.55966862822	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	41189377	41131677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41171846_41171935_41172711_41172750_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_139198.known	chr9	-	721	7	FSM	ENSG00000215126.11	ENST00000617933.1	721	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	521.094814362565	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGAAGAGAATGAAATC	NA	False	NA	NA	False	AGTAAA	-38	NA	41189436	41171919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_41171935_41172711_41172750_41174292_41174353_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_139200.nic	chr9	-	676	3	ISM	ENSG00000215126.11	ENST00000617933.1	721	7	-10	11494	-10	-11494	5prime_fragment	FALSE	canonical	3	947	junction_1	237	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAAAGTGTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	41189446	41183413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_41183661_41185992_41186080_41189104
transcript_139208.nic	chr9	+	593	3	NIC	ENSG00000231527.7	novel	2056	3	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTTGTAAGTTT	NA	False	NA	NA	False	AAGAAA	-18	NA	61854098	61975965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_61854377_61917467_61917608_61975790
transcript_139211.known	chr9	+	559	3	FSM	ENSG00000231527.7	ENST00000657353.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTTGTAAGTTT	2370	False	NA	NA	False	AAGAAA	-18	NA	61856570	61975965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_61856815_61917467_61917608_61975790
transcript_139212.known	chr9	+	616	2	FSM	ENSG00000231527.7	ENST00000377542.3	616	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGAGATCCGTGTCA	45	False	NA	NA	False	AAAAAG	-28	NA	61854161	61855331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_61854377_61854930
transcript_139213.known	chr9	-	439	2	FSM	ENSG00000235659.1	ENST00000377547.3	439	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGGCTCTACTGACAG	NA	False	NA	NA	False	NA	NA	NA	61866965	61865754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_61866078_61866849
transcript_139216.nnic	chr9	+	1910	4	NNC	ENSG00000227449.8	novel	1890	3	NA	NA	145	55	intron_retention	FALSE	canonical	2	15	junction_2	3.55902608401044	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTGTTTCATATGCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	62376305	62435254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_62376814_62386773_62386884_62432875_62432980_62434066
transcript_139218.known	chr9	+	1890	3	FSM	ENSG00000227449.8	ENST00000377614.7	1890	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATTTTGTTATTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	62376160	62435199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62376814_62432875_62432980_62434066
transcript_139221.known	chr9	-	2541	2	FSM	ENSG00000204802.3	ENST00000377518.3	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCGGGCAAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62376783	62374127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62376383_62376497
transcript_139222.known	chr9	-	256	2	FSM	ENSG00000204802.3	ENST00000412631.1	256	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62376126	62375327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62375529_62376071
transcript_139226.known	chr9	+	1549	3	FSM	ENSG00000226007.3	ENST00000450704.1	1549	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTGGAGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	62532336	62534724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62532689_62532802_62532933_62533657
transcript_139227.nic	chr9	+	870	3	NIC	ENSG00000226007.3	novel	841	3	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	7	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62532330	62533858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_62532689_62532802_62533114_62533657
transcript_139231.nnic	chr9	+	753	2	NNC	ENSG00000226007.3	novel	2245	2	NA	NA	-25	4193	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTTCCAGTTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	62532311	62538917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_62532689_62538541
transcript_139232.known	chr9	+	2245	2	FSM	ENSG00000226007.3	ENST00000446626.2	2245	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCTGGTGGAGTGCTCT	NA	False	NA	NA	False	NA	NA	NA	62532363	62534722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62532689_62532802
transcript_139234.nnic	chr9	+	551	2	NIC	ENSG00000226007.3	novel	1549	3	NA	NA	-2	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTAGCCTTGGATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	62532334	62533854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_62532689_62533657
transcript_139235.known	chr9	+	841	3	FSM	ENSG00000226007.3	ENST00000420615.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62532377	62533858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62532689_62532784_62533114_62533657
transcript_139236.known	chr9	+	1604	3	FSM	ENSG00000238113.7	ENST00000663670.1	1604	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATTCCTCTATAAC	NA	False	NA	NA	False	AATAAA	-23	NA	62802735	62810846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62803104_62803983_62804141_62809767
transcript_139238.known	chr9	+	667	3	FSM	ENSG00000170161.7	ENST00000671425.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62897370	62898904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62897735_62897877_62897980_62898703
transcript_139241.known	chr9	+	1567	3	FSM	ENSG00000170161.7	ENST00000476224.2	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	62897371	62899777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62897735_62897849_62897980_62898703
transcript_139243.known	chr9	-	1610	5	FSM	ENSG00000234665.9	ENST00000445604.7	1610	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.3788038445484	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCACATGTAGGATCAAT	NA	False	NA	NA	False	NA	NA	NA	62898095	62865596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62865734_62866966_62867111_62867696_62868234_62869189_62869305_62897418
transcript_139244.known	chr9	-	1713	3	FSM	ENSG00000234665.9	ENST00000654882.1	1713	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	2	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTAACTGCTTTGTT	NA	False	NA	NA	False	GATAAA	-20	NA	62898095	62867202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62868234_62869189_62869305_62897528
transcript_139249.known	chr9	+	2541	2	FSM	ENSG00000170161.7	ENST00000305709.5	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGGGCCAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62897448	62900104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62897735_62897849
transcript_139252.nnic	chr9	+	448	2	NNC	ENSG00000198312.4	novel	885	6	NA	NA	-2373	-3052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTTTGTGCTTTTCCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	63053267	63056165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_63053473_63055922
transcript_139259.known	chr9	+	4137	15	FSM	ENSG00000172014.12	ENST00000357336.3	4137	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.30149051130633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATATGTGTGGTGATAAT	NA	False	NA	NA	False	AATAAA	-35	NA	64369393	64413142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_64369878_64373186_64373302_64373463_64373638_64377520_64377628_64378673_64378812_64381403_64381460_64388003_64388035_64390716_64390787_64394737_64394823_64397556_64397586_64397676_64397750_64403716_64403788_64407844_64408009_64409434_64409616_64410783
transcript_13926.known	chr1	+	459	2	FSM	ENSG00000225265.2	ENST00000441835.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCAGTGATTTCTTACA	NA	False	NA	25	True	AATAAA	-26	NA	222589824	222592486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222589963_222592165
transcript_139264.nic	chr9	+	1468	12	ISM	ENSG00000172014.12	ENST00000357336.3	4137	15	-35	9355	-35	-9355	5prime_fragment	FALSE	canonical	0	0	junction_8	1.4142135623731	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATATGAAAATTTAAGTTT	NA	False	NA	NA	False	NA	NA	NA	64369358	64403787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_64369878_64373186_64373302_64373463_64373638_64377520_64377628_64378673_64378812_64381403_64381460_64388003_64388035_64390716_64390787_64394737_64394823_64397556_64397586_64397676_64397750_64403716
transcript_139266.nnic	chr9	-	467	2	NNC	ENSG00000225883.2	novel	885	6	NA	NA	-2389	-3051	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTTTCCTTTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	64711700	64708784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_64709030_64711478
transcript_139268.nnic	chr9	-	1006	6	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16495	430	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	678.212651017363	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	NA	False	NA	NA	False	AATAAA	-16	NA	65306520	65287483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65306363
transcript_13927.known	chr1	+	1503	2	FSM	ENSG00000225265.2	ENST00000668515.1	1503	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGTCCTTTGTGCT	204	False	NA	NA	False	AATAAA	-34	NA	222590178	222593439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222590408_222592165
transcript_139278.nnic	chr9	-	589	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16411	59	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_4	720.496703670461	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	65306604	65287854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65289657_65289724_65289826_65289896_65301424_65301477_65306363
transcript_13929.known	chr1	-	1047	7	FSM	ENSG00000143498.18	ENST00000465263.1	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	32.3492228998198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCAAAATTGATAAGTGT	-3	True	NA	NA	False	NA	NA	NA	222589886	222569536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_222569669_222570534_222570666_222577444_222577644_222579758_222579891_222584127_222584298_222588442_222588566_222589726
transcript_139293.known	chr9	+	894	4	FSM	ENSG00000147996.17	ENST00000377380.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	435.343797730279	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCTTACATTATGT	NA	False	NA	NA	False	AATAAA	-14	NA	65675874	65682026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573
transcript_139295.known	chr9	+	1347	3	FSM	ENSG00000147996.17	ENST00000377384.5	1347	3	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_2	184	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTATTGTTTTCTCCC	NA	False	NA	NA	False	AATAAA	-42	NA	65675874	65682577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573
transcript_139296.known	chr9	+	1411	16	FSM	ENSG00000147996.17	ENST00000497250.5	1411	16	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_7	527.930652011543	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	6	False	NA	-1	True	AATAAA	-16	NA	65675895	65733670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_139297.known	chr9	+	1662	15	FSM	ENSG00000147996.17	ENST00000382405.8	1662	15	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	521.770010519531	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	0	True	NA	NA	False	AATAAA	-16	NA	65675927	65734041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_139298.known	chr9	+	1242	14	FSM	ENSG00000147996.17	ENST00000430059.6	1242	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	551.024983593647	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	8	False	NA	3	True	AATAAA	-20	NA	65675923	65733674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_139299.known	chr9	+	1143	13	FSM	ENSG00000147996.17	ENST00000377395.8	1143	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	587.007878993119	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGCATTTATTTATTA	10	False	NA	5	True	AATAAA	-22	NA	65675937	65733676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_13930.known	chr1	+	8126	28	FSM	ENSG00000154305.18	ENST00000344922.10	8126	28	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	38.6134513901294	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCAATTTAAGCTTC	2	True	NA	14	True	ATTAAA	-16	NA	222618096	222668007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574_222630390_222632164_222632327_222633103_222633250_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_139300.known	chr9	+	2863	17	FSM	ENSG00000147996.17	ENST00000377392.9	2863	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	563.683740562915	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATGTTGATGTTGACGA	NA	False	NA	NA	False	AATAAA	-15	NA	65675833	65734040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65704330_65704589_65708139_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_139301.known	chr9	+	1234	14	FSM	ENSG00000147996.17	ENST00000429800.6	1234	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	519.626584175837	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCAAGCATTTATTTA	0	True	NA	2	True	AATAAA	-19	NA	65675927	65733673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_139309.known	chr9	+	4016	5	FSM	ENSG00000274349.5	ENST00000621410.5	4016	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.27200187265877	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTTCCTAGGTATT	NA	False	NA	NA	False	AATAAA	-20	NA	66900724	66921426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_66900837_66903517_66903577_66908237_66908365_66908638_66908735_66917804
transcript_13931.known	chr1	+	2735	23	FSM	ENSG00000154305.18	ENST00000340535.11	2735	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	50.5591871469338	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCTTACAACTTTGAA	-27	True	NA	22	True	AATAAA	-19	NA	222644302	222665823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222644587_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_139311.known	chr9	+	4160	5	FSM	ENSG00000274349.5	ENST00000612867.4	4160	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5.1234753829798	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATTTTTCCTAGGTATT	NA	False	NA	NA	False	AATAAA	-20	NA	66900737	66921426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_66900837_66903360_66903577_66908237_66908365_66908638_66908735_66917804
transcript_13934.nic	chr1	+	841	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-18	18104	-16	-18104	5prime_fragment	FALSE	canonical	3	148	junction_1	5.55777733351102	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTCTAGACTTGAAAACC	-14	True	NA	NA	False	TATAAA	-17	NA	222618080	222628031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_13935.nic	chr1	+	1270	4	ISM	ENSG00000154305.18	ENST00000470521.1	4071	7	-18	17675	-16	-17675	5prime_fragment	FALSE	canonical	3	148	junction_1	5.55777733351102	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGATGATGCATTAGTC	-14	True	NA	NA	False	AAAAAG	-4	NA	222618080	222628460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574
transcript_139350.known	chr9	+	1685	15	FSM	ENSG00000196873.16	ENST00000360171.11	1685	15	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_12	381.345690567346	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTGGCTGAAGGAGTG	-1	True	NA	NA	False	AATAAA	-39	NA	68241982	68300035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_13938.known	chr1	+	4104	13	FSM	ENSG00000162819.12	ENST00000340934.10	4104	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	6.99354861441759	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	5	True	NA	17	True	AATAAA	-18	NA	222712563	222735187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222712943_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627
transcript_139388.known	chr9	+	721	7	FSM	ENSG00000196873.16	ENST00000616550.4	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	495.795544778513	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGAAGAGAATGAAATC	NA	False	NA	NA	False	AGTAAA	-38	NA	68241853	68259361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68259346
transcript_139389.known	chr9	+	1403	4	FSM	ENSG00000196873.16	ENST00000377349.6	1403	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	436.453383026819	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTCTTTTTACCTAT	0	True	NA	NA	False	AATAAA	-14	NA	68241944	68248589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68243182_68243281_68245212_68245300_68247612
transcript_139390.known	chr9	+	1736	3	FSM	ENSG00000196873.16	ENST00000478048.5	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_2	245	2787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACTCGTTTGTCA	11	False	NA	NA	False	ATTAAA	-45	NA	68241955	68249031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68245212_68245300_68247612
transcript_139391.known	chr9	+	3115	16	FSM	ENSG00000107242.20	ENST00000265382.8	3115	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.02988833592198	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGGTACATCGATTC	-1	True	NA	3	True	AATAAA	-16	NA	68705239	69009176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68705763_68742500_68742658_68818460_68818546_68822614_68822684_68863836_68863968_68876676_68876795_68888980_68889134_68894338_68894639_68917547_68917760_68919478_68919563_68919680_68919730_68923301_68923387_68934889_68935046_68940645_68940791_68991139_68991258_69008446
transcript_139392.nic	chr9	+	2570	15	NIC	ENSG00000107242.20	novel	3115	16	NA	NA	214	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	2.0763488362498	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGTGGTACATCGATTC	111	False	NA	3	True	AATAAA	-16	NA	68705627	69009176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_68705763_68818460_68818546_68822614_68822684_68863836_68863968_68876676_68876795_68888980_68889134_68894338_68894639_68917547_68917760_68919478_68919563_68919680_68919730_68923301_68923387_68934889_68935046_68940645_68940791_68991139_68991258_69008446
transcript_139395.known	chr9	+	922	5	FSM	ENSG00000165060.15	ENST00000396366.6	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	197.010786506729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTATGCCTATACCT	-10	True	NA	93	True	NA	NA	NA	69035761	69073022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065044_69072611
transcript_139397.known	chr9	+	856	5	FSM	ENSG00000165060.15	ENST00000498653.5	856	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216.230634971088	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTCACTCTTCATTCT	314	False	NA	NA	False	AAAAAG	-41	NA	69036160	69073105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69036206_69046384_69046483_69053139_69053261_69064937_69065036_69072611
transcript_139399.known	chr9	+	2632	4	FSM	ENSG00000165060.15	ENST00000644653.1	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	207.192342200832	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCCAGTGCCAGTGAG	-21	True	NA	-38	True	AATAAA	-36	NA	69035750	69074850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69072611
transcript_139406.known	chr9	-	750	4	FSM	ENSG00000278910.5	ENST00000624238.3	764	4	7	7	-2	-3	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTACTGTGCACAT	3989	False	NA	NA	False	AATAAA	-17	NA	69307135	69296684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_69296868_69304935_69305078_69306147_69306291_69306853
transcript_139407.nnic	chr9	-	634	4	NNC	ENSG00000278910.5	novel	764	4	NA	NA	-446	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.08248290463863	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTACTGTGCACAT	3536	False	NA	NA	False	AATAAA	-17	NA	69307588	69296684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_69296868_69304935_69305078_69306853_69306969_69307394
transcript_139409.nnic	chr9	-	437	3	NIC	ENSG00000278910.5	novel	558	4	NA	NA	-17	-3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTACTGTGCACAT	-4	True	NA	NA	False	AATAAA	-17	NA	69311128	69296684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_69296868_69304935_69305078_69311016
transcript_139410.known	chr9	+	2216	11	FSM	ENSG00000135063.20	ENST00000455972.6	2216	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.9462980933004	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATCACGGACAATAAATC	NA	False	NA	121	True	NA	NA	NA	69324566	69392558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69324631_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
transcript_139413.known	chr9	-	10099	8	FSM	ENSG00000188647.13	ENST00000340434.5	10099	8	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	24.403914038698	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTAAGTGTGATTTT	-3	True	NA	-4	True	AGTAAA	-18	NA	69760011	69709524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_69718569_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_139419.nic	chr9	-	1780	7	NIC	ENSG00000188647.13	novel	10099	8	NA	NA	-2	146	intron_retention	FALSE	canonical	3	68	junction_1	8.13770374382247	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATGGTGCTATGCAAC	-6	True	NA	NA	False	AGTAAA	-11	NA	69759961	69717874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_139423.nic	chr9	-	1326	6	ISM	ENSG00000188647.13	ENST00000340434.5	10099	8	-4	13499	-4	-5003	5prime_fragment	FALSE	canonical	3	77	junction_3	6.06630035524124	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGACTCCTTCCTTGGA	-7	True	NA	NA	False	AATAAA	-16	NA	69760015	69723023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_139427.nic	chr9	-	926	5	ISM	ENSG00000188647.13	ENST00000340434.5	10099	8	-4	22407	-4	0	5prime_fragment	FALSE	canonical	3	77	junction_2	6.75925291729789	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGTGCATTGGTAAAGC	-7	True	NA	22	True	AATAAA	-42	NA	69760015	69731931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_139428.nnic	chr9	-	718	4	NIC	ENSG00000188647.13	novel	10099	8	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	37.1872140511882	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGTGCATTGGTAAAGC	-22	True	NA	22	True	AATAAA	-42	NA	69759977	69731931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_69732353_69734149_69734255_69741791_69741859_69759852
transcript_13943.known	chr1	-	2975	10	FSM	ENSG00000186063.13	ENST00000340020.11	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_5	42.2847490237319	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	-12	True	NA	0	True	ATTAAA	-16	NA	222712491	222668012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222712207
transcript_139432.known	chr9	-	1689	2	FSM	ENSG00000188647.13	ENST00000472967.2	1689	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTTGTGGGTACC	-4	True	NA	NA	False	ATTAAA	-17	NA	69759959	69757122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_69758705_69759852
transcript_139433.nnic	chr9	-	617	2	NNC	ENSG00000188647.13	novel	1689	2	NA	NA	-20	-643	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTAAGGCATTGT	71	False	NA	NA	False	AATAAA	-17	NA	69759979	69757765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_69758256_69759852
transcript_139440.known	chr9	+	844	6	FSM	ENSG00000204711.9	ENST00000377197.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	43.1249347825594	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	5	True	NA	16	True	AATAAA	-17	NA	69820816	69906227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_139443.known	chr9	+	794	6	FSM	ENSG00000204711.9	ENST00000466872.2	794	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	56.5848036136912	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	16	False	NA	16	True	AATAAA	-17	NA	69820827	69906227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69885052_69885123_69886837_69886896_69905953
transcript_139445.known	chr9	+	748	5	FSM	ENSG00000204711.9	ENST00000527647.5	748	5	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_4	44.4803327325684	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	15	False	NA	-12	True	AATGAA	-28	NA	69820826	69906199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69905953
transcript_139448.known	chr9	+	697	5	FSM	ENSG00000204711.9	ENST00000529446.5	697	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	12.6688594593199	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	15	False	NA	-12	True	AATGAA	-28	NA	69820826	69906199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_139451.known	chr9	+	550	4	FSM	ENSG00000204711.9	ENST00000480564.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	43.058100283222	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACAGTAAATCCTC	119	False	NA	-17	True	NA	NA	NA	69820959	69858158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908
transcript_139453.known	chr9	+	502	3	FSM	ENSG00000204711.9	ENST00000495399.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	15.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCAGATCCTGTATT	79	False	NA	4	True	AATAAA	-15	NA	69820919	69858179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69856554_69856674_69857908
transcript_139454.known	chr9	+	3351	14	FSM	ENSG00000165072.10	ENST00000377182.5	3351	14	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	9.00952815818543	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTAGCAATTAACTCAT	0	True	NA	10	True	AATAAA	-18	NA	70043847	70226972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_70044232_70044583_70044698_70108210_70108483_70109719_70109805_70112994_70113133_70126158_70126416_70131518_70131613_70140144_70140289_70143553_70143820_70168701_70168796_70170478_70170632_70218336_70218597_70225749_70225835_70225967
transcript_139462.known	chr9	+	474	1	FSM	ENSG00000236801.1	ENST00000446071.1	474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	919	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCAGATTAGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	70217194	70217668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_70217200_70217700
transcript_139463.known	chr9	+	5949	25	FSM	ENSG00000198887.9	ENST00000361138.7	5949	25	0	0	0	0	multi-exon	FALSE	canonical	2	90	junction_11	25.1933839970382	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	10	True	NA	32	True	AATAAA	-18	NA	70258977	70354873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
transcript_139464.known	chr9	-	5201	2	FSM	ENSG00000119138.5	ENST00000377126.4	5201	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAATTGTTCTAGCCAT	6933	False	NA	-13	True	AATAAA	-17	NA	70414657	70384603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_70388006_70412858
transcript_139471.known	chr9	-	1260	7	FSM	ENSG00000083067.24	ENST00000361823.9	1260	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	16.2112786527021	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTCATAGGCTGTGGTC	52	False	NA	-2	True	AATAAA	-19	NA	70869029	70783859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_70784280_70827846_70828019_70843002_70843128_70846377_70846592_70862907_70863113_70864431_70864512_70868985
transcript_139477.known	chr9	+	333	1	FSM	ENSG00000229814.1	ENST00000437667.1	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAACGAAAAGTCAATAAA	62	False	NA	NA	False	NA	NA	NA	71589600	71589933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71589600_71589900
transcript_139478.known	chr9	-	6152	24	FSM	ENSG00000135048.14	ENST00000377044.9	6152	24	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_22	24.2718535210217	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGTGTATGTGAATT	-1	True	NA	-2	True	AATAAA	-22	NA	71768513	71683365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71734805_71734995_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
transcript_139479.known	chr9	-	542	2	FSM	ENSG00000135048.14	ENST00000543165.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGGAGGAAATAGTAGA	-1	True	NA	NA	False	NA	NA	NA	71768513	71750000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_71750386_71768356
transcript_139486.known	chr9	-	3065	4	FSM	ENSG00000107362.14	ENST00000333421.7	3065	4	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	8.28653526310404	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTTATTTGCCTTTT	2	True	NA	-6	True	AGTAAA	-20	NA	71911193	71865151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_71867007_71870082_71870263_71874613_71875084_71910633
transcript_139490.known	chr9	+	539	5	FSM	ENSG00000155621.15	ENST00000377027.1	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.049453690963	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGTATTAAAAGTCTG	111	False	NA	NA	False	AATGAA	-6	NA	71911801	71972843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71911837_71918424_71918556_71947005_71947113_71971504_71971619_71972691
transcript_139491.known	chr9	+	1185	4	FSM	ENSG00000155621.15	ENST00000334731.7	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	14.0079342596338	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	2	True	NA	15	True	AATAAA	-16	NA	71911638	71973457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71972691
transcript_139499.known	chr9	+	902	3	FSM	ENSG00000155621.15	ENST00000479413.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	51	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAAGTCAATTTA	28	False	NA	-18	True	NA	NA	NA	71911509	71973152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71911837_71971504_71971619_71972691
transcript_139505.nnic	chr9	+	1016	3	NNC	ENSG00000155621.15	novel	902	3	NA	NA	55051	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	55.5	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	NA	False	NA	15	True	AATAAA	-16	NA	71966852	71973457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_71966989_71971504_71971619_71972691
transcript_139507.known	chr9	-	1073	7	FSM	ENSG00000107372.13	ENST00000343431.6	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	340.133797203395	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTTATAATTGATATT	6719	False	NA	29	True	NA	NA	NA	72364626	72355832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364461
transcript_13951.known	chr1	+	782	2	FSM	ENSG00000162819.12	ENST00000496267.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGTAGGCATTTCATA	0	True	NA	107	True	AATAAA	-17	NA	222712558	222713985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222712943_222713587
transcript_139510.known	chr9	-	5310	6	FSM	ENSG00000107372.13	ENST00000237937.7	5310	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	351.023076164517	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTGCCATAAATGTA	6753	False	NA	-38	True	AATAAA	-20	NA	72364592	72351424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364461
transcript_139511.known	chr9	-	2686	6	FSM	ENSG00000107372.13	ENST00000376960.8	2686	6	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_5	176.884821282099	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACTTGTTCATTGGGTT	6110	False	NA	-4	True	AATAAA	-20	NA	72365235	72354457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364695
transcript_139512.known	chr9	+	588	2	FSM	ENSG00000225434.4	ENST00000451152.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	19	False	NA	NA	False	AATAAA	-17	NA	72305516	72315464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_72305626_72314985
transcript_139513.known	chr9	+	671	2	FSM	ENSG00000225434.4	ENST00000451596.3	677	2	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-6	True	NA	NA	False	AATAAA	-17	NA	72305429	72315464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_72305626_72314989
transcript_139524.known	chr9	-	609	4	FSM	ENSG00000236849.6	ENST00000654093.1	609	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCAGCTCTCTTTCATG	-4	True	NA	NA	False	AATAAA	-24	NA	72874135	72871727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72872017_72872108_72872232_72873026_72873156_72874067
transcript_139525.known	chr9	-	660	4	FSM	ENSG00000236849.6	ENST00000423171.6	660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGCTCTCTTTCATGTCT	-4	True	NA	NA	False	AATAAA	-27	NA	72874135	72871724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72872017_72872108_72872232_72873026_72873152_72874015
transcript_139526.known	chr9	-	2096	13	FSM	ENSG00000165092.13	ENST00000297785.8	2096	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.71825107171668	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTACTTTTGAATTT	1	True	NA	-2	True	AATAAA	-16	NA	72953053	72900670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72901281_72905957_72906033_72909601_72909760_72911957_72912123_72916919_72917105_72918719_72918823_72924018_72924133_72925483_72925613_72927115_72927178_72928891_72929022_72930878_72931020_72940147_72940253_72952934
transcript_139529.known	chr9	+	1401	13	FSM	ENSG00000135046.14	ENST00000257497.11	1401	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	6.42207564231032	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGTCATTGACTCTT	4	True	NA	16	True	AATAAA	-18	NA	73151864	73170393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_73151925_73158521_73158602_73158694_73158804_73159328_73159424_73160262_73160377_73160802_73160894_73162781_73162862_73163475_73163533_73165115_73165210_73166096_73166193_73167496_73167556_73169031_73169155_73170050
transcript_139530.known	chr9	+	9581	10	FSM	ENSG00000198963.11	ENST00000376896.8	9581	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	4.33190859769287	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTAATGGTTTTCT	-3	True	NA	NA	False	ATTAAA	-18	NA	74497334	74693177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_74497984_74630281_74630368_74634630_74634773_74642413_74642816_74660616_74660739_74662473_74662607_74665487_74665596_74667790_74667902_74671788_74671902_74685462
transcript_139532.nnic	chr9	-	937	5	NNC	ENSG00000224825.2	novel	1178	3	NA	NA	1946	30378	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.29128784747792	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTCAATGCTCTTT	2295	False	NA	NA	False	AATAAA	-22	NA	74497181	74455172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_74455575_74477666_74477748_74483227_74483340_74486123_74486290_74497005
transcript_139534.nnic	chr9	-	567	4	NNC	ENSG00000224825.2	novel	1178	3	NA	NA	1946	7916	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTCAGGTATTCTGT	2295	False	NA	NA	False	AATAAA	-21	NA	74497181	74477634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_74477748_74483227_74483340_74486123_74486290_74497005
transcript_139539.nnic	chr9	+	552	2	Intergenic	novelGene_81	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGGAAAAGGATAA	NA	False	NA	NA	False	NA	NA	NA	74952289	74953449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr9_+_74952573_74953180
transcript_139541.nnic	chr9	+	610	2	Intergenic	novelGene_82	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGGTTGTTATTCAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	74952289	74953507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr9_+_74952573_74953180
transcript_139544.known	chr9	-	2351	2	FSM	ENSG00000135045.7	ENST00000376854.6	2351	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTGTTTATTGTCAA	0	True	NA	-18	True	AATAAA	-15	NA	74952912	74946582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_74948207_74952185
transcript_139545.known	chr9	-	4259	8	FSM	ENSG00000156017.13	ENST00000376834.8	4259	8	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	20.9274743739771	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCTTGATTTTCAGTTTT	9	True	NA	NA	False	AATAAA	-26	NA	75028293	74980789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_74983869_74984906_74985011_74996446_74996561_74998597_74998777_74999729_74999871_75016267_75016432_75017252_75017449_75028011
transcript_139557.known	chr9	-	453	2	FSM	ENSG00000106733.21	ENST00000490321.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCCGTAAAATTT	776	False	NA	67	True	AATATA	-38	NA	75088135	75087543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75087869_75088007
transcript_139558.known	chr9	-	1754	9	FSM	ENSG00000106733.21	ENST00000361092.9	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	19.2272592950738	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTCAATCTTTTTTTTA	13	True	NA	NA	False	AATAAA	-15	NA	75088155	75060576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_139559.known	chr9	-	2050	10	FSM	ENSG00000106733.21	ENST00000376811.5	2050	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	35.973584272798	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATCTTTTTTTTATATA	-22	True	NA	NA	False	AATAAA	-19	NA	75088190	75060572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078583_75083086_75083151_75088007
transcript_139560.known	chr9	-	1121	8	FSM	ENSG00000106733.21	ENST00000376808.8	1121	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	34.0731506003882	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	4	True	NA	-1	True	AATAAA	-19	NA	75088217	75061199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_139561.known	chr9	-	1903	7	FSM	ENSG00000106733.21	ENST00000494066.1	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	20.6128331116537	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGTGGAATTCATTG	12	True	NA	-3	True	AATAAA	-17	NA	75088209	75061201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75061568_75066756_75066841_75068995_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_139563.known	chr9	+	1348	10	FSM	ENSG00000134996.12	ENST00000346234.7	1348	10	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	19.5946578761649	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGATTTTATTTTTT	-17	True	NA	99	True	AGTAAA	-18	NA	75088513	75147265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_139567.nnic	chr9	+	1222	9	NIC	ENSG00000134996.12	novel	1348	10	NA	NA	-40	-67	combination_of_known_splicesites	FALSE	canonical	3	12	junction_8	62.4168196482326	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTGTCCGTTTCTGT	-9	True	NA	32	True	AATAAA	-18	NA	75088473	75147198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_75088727_75117503_75117551_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75146682
transcript_139569.nnic	chr9	+	1270	9	NIC	ENSG00000134996.12	novel	1348	10	NA	NA	-36	-67	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	61.4567937660272	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTGTCCGTTTCTGT	-5	True	NA	32	True	AATAAA	-18	NA	75088477	75147198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_75088727_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_139572.known	chr9	+	5756	21	FSM	ENSG00000099139.14	ENST00000376752.8	5756	21	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	6.94982014155762	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGTTCATACCCAC	28	False	NA	17	True	ATTAAA	-21	NA	75890704	76195889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_75891374_75932378_75932484_75986131_75986246_76023737_76023882_76026960_76027038_76067954_76068044_76071725_76071899_76095889_76096103_76107250_76107352_76134108_76134213_76157044_76157163_76158982_76159172_76169703_76169841_76174985_76175130_76179595_76179699_76181397_76181592_76184672_76184758_76188577_76188676_76189093_76189224_76189630_76189747_76193236
transcript_139573.known	chr9	-	962	4	FSM	ENSG00000135002.12	ENST00000483155.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	76.7115810465843	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTAATCCCAGCACTTTG	-7	True	NA	NA	False	AGTAAA	-30	NA	76393957	76386980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76393799
transcript_139574.known	chr9	-	2596	4	FSM	ENSG00000135002.12	ENST00000376736.6	2596	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	12.675435561221	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCCTGTGTCA	-9	True	NA	-10	True	AATAAA	-17	NA	76394426	76385525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76394089
transcript_139579.known	chr9	+	461	3	FSM	ENSG00000187210.14	ENST00000480311.5	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	53.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTTTTAAGGATTCATCAA	24	True	NA	NA	False	NA	NA	NA	76459221	76502469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_76459306_76500915_76501062_76502238
transcript_13958.known	chr1	+	4691	8	FSM	ENSG00000154309.9	ENST00000675039.1	4691	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.4230748895809	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAAATGCAGCATTCAAT	-21	True	NA	-6	True	AATAAA	-8	NA	222815069	223005969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222942806_222943333_222983079_222983110_222990624_222990749_222991519_222991648_222992012_222992111_222994884_222994983_223002384
transcript_139585.nic	chr9	-	4240	10	NIC	ENSG00000106772.19	novel	4308	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	9.3571125650788	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATGGTTTTCTTTCTTT	-7	True	NA	-13	True	AATAAA	-14	NA	76692203	76611375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_76614601_76629191_76629291_76636470_76636558_76637417_76637550_76638185_76638289_76641971_76641981_76644738_76644913_76652482_76652684_76655422_76655503_76692073
transcript_139587.known	chr9	-	1264	6	FSM	ENSG00000106772.19	ENST00000492157.5	1264	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.00665927567458	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGCAAGTTGTCT	219	False	NA	NA	False	AAAAAG	-7	NA	76906087	76823247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_76823727_76826579_76826733_76846514_76846679_76850462_76850666_76854103_76854209_76905927
transcript_139589.known	chr9	+	11145	71	FSM	ENSG00000197969.14	ENST00000376636.7	11145	71	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_29	16.9578649503252	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAATCAAACCACAAGTT	31	False	NA	128	True	NA	NA	NA	77177444	77417483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77212968_77213029_77213233_77213315_77214328_77214387_77219953_77220082_77220276_77220384_77221184_77221357_77225925_77225989_77226465_77226599_77227390_77227486_77228121_77228265_77238001_77238192_77238271_77238387_77247258_77247396_77250096_77250230_77252234_77252353_77260085_77260225_77273279_77273365_77275497_77275653_77276064_77276222_77280158_77280239_77281866_77281927_77282120_77282275_77283546_77283651_77293340_77293509_77295541_77295847_77302914_77303063_77307944_77308099_77313991_77314120_77314494_77314665_77315252_77315471_77316173_77316407_77317605_77317699_77318234_77318592_77319571_77319674_77321168_77321328_77321490_77321747_77323066_77323228_77332009_77332114_77337254_77337538_77339515_77339912_77340177_77340283_77340403_77340551_77344152_77344282_77345008_77345143_77351316_77351447_77353408_77353642_77356713_77356868_77357691_77357839_77358356_77358439_77359332_77359403_77360535_77360642_77365459_77365574_77366726_77366873_77368054_77368137_77369298_77369413_77370256_77370333_77370414_77370579_77370889_77370936_77371025_77371150_77381975_77382088_77403235_77403322_77405863_77405988_77407532_77407608_77415955
transcript_139590.nic	chr9	+	1170	8	NIC	ENSG00000197969.14	novel	10086	69	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	14.059639731791	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAATGCCCTCCAA	-40	True	NA	NA	False	TTTAAA	-23	NA	77177494	77211617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77211212
transcript_139596.known	chr9	-	2497	7	FSM	ENSG00000156049.7	ENST00000341700.7	2497	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.40947204913349	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTATGTTGTGTT	-5	True	NA	-2	True	AATATA	-15	NA	77648322	77423078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_77424170_77425561_77425716_77428906_77429037_77431320_77431450_77434367_77434523_77529068_77529254_77647669
transcript_1396.known	chr1	+	440	2	FSM	ENSG00000228150.1	ENST00000445884.1	440	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGAGATCTTTATTT	NA	False	NA	NA	False	NA	NA	NA	9942922	9949974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9943026_9949637
transcript_139601.known	chr9	+	2626	16	FSM	ENSG00000148019.14	ENST00000376597.9	2626	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	66.7291040950898	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTGTCTTAAAATATAG	125	False	NA	31	True	AATAAA	-25	NA	78236206	78267075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78265858_78265907_78266441
transcript_139602.known	chr9	+	2371	15	FSM	ENSG00000148019.14	ENST00000642669.1	2371	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	59.7750886614967	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAAAGTGATACTCTT	188	False	NA	NA	False	AATAAA	-23	NA	78236269	78266931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_78236604_78240022_78240196_78240291_78240365_78241695_78241800_78243461_78243637_78246668_78246783_78248290_78248356_78248761_78248874_78251904_78252044_78253231_78253278_78254835_78254965_78262906_78262985_78264149_78264317_78265371_78265544_78266441
transcript_139617.known	chr9	+	2206	9	FSM	ENSG00000135069.14	ENST00000376588.4	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	1479	junction_7	107.242715370322	6767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	-2	True	NA	15	True	ATTAAA	-17	NA	78297124	78330093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328050_78328189_78328980
transcript_139622.known	chr9	+	1536	5	FSM	ENSG00000106829.20	ENST00000461758.6	1536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.4496474135372	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGCAAAAAAAAAAAAAAAT	-1	True	NA	NA	False	NA	NA	NA	79571940	79576802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576284_79576474
transcript_139626.known	chr9	-	1115	6	FSM	ENSG00000196781.16	ENST00000376463.3	1115	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	116.324374058062	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	2253	False	NA	-2	True	AATAAA	-18	NA	81687368	81633468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333
transcript_139628.nnic	chr9	+	438	2	NNC	ENSG00000228430.9	novel	1301	10	NA	NA	258751	-1	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTATTTTGTTTTTTGA	NA	False	NA	1	True	AATAAA	-16	NA	82750702	82780193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_82750826_82779878
transcript_139631.nnic	chr9	-	596	4	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-141634	-216	multi-exon	FALSE	canonical	2	4	junction_1	9.42809041582063	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGAGATTCAGTGTCT	NA	False	NA	-4	True	AATAAA	-25	NA	82886426	82744282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_82744445_82782325_82782383_82831037_82831127_82886138
transcript_139635.nnic	chr9	-	376	3	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-141471	-216	multi-exon	FALSE	canonical	2	11	junction_1	6.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGAGATTCAGTGTCT	NA	False	NA	-4	True	AATAAA	-25	NA	82886263	82744282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_82744445_82831037_82831127_82886138
transcript_139637.known	chr9	+	936	5	FSM	ENSG00000148057.16	ENST00000376419.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.1650635094611	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATTCCCTGGAAATT	10	True	NA	1	True	AATAAA	-16	NA	83623142	83644123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83623222_83628180_83628212_83628872_83628960_83641547_83641592_83643428
transcript_139638.known	chr9	+	607	5	FSM	ENSG00000148057.16	ENST00000530832.5	607	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.87059749960509	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAGGGACATTTTAT	14	True	NA	NA	False	NA	NA	NA	83623146	83643624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83623222_83628006_83628212_83628872_83628960_83641547_83641592_83643428
transcript_139639.known	chr9	+	629	4	FSM	ENSG00000148057.16	ENST00000405990.3	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.11805216802087	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAATGTTTCTAAAGGC	33	False	NA	NA	False	NA	NA	NA	83623165	83643870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83623222_83628872_83628960_83641547_83641592_83643428
transcript_139640.known	chr9	-	3868	11	FSM	ENSG00000135018.14	ENST00000376395.9	3868	11	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_4	270.92980640749	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATTTGTCTTGCCTCTT	-5	True	NA	-6	True	AATAAA	-16	NA	83707958	83659967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83666349_83666434_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_139641.known	chr9	-	2299	10	FSM	ENSG00000135018.14	ENST00000257468.11	2299	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	304.866455280924	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCATTTGCACTCTAT	19	True	NA	-20	True	AATAAA	-15	NA	83707934	83661428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_139643.known	chr9	+	1017	2	FSM	ENSG00000254473.2	ENST00000531661.2	1175	2	40	118	40	-118	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAACGCTTCCACAACC	19	True	NA	NA	False	NA	NA	NA	83708317	83713378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83708454_83712497
transcript_139644.known	chr9	-	1801	13	FSM	ENSG00000165113.13	ENST00000376371.7	1801	13	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	11.722189310117	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATGTTTGATTTGTTA	-11	True	NA	-4	True	AATAAA	-18	NA	83817769	83739424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83768817_83768971_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
transcript_139653.nnic	chr9	-	645	4	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	-13	-20836	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.8261413442938	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGTTACTTAATG	-25	True	NA	1	True	AATAAA	-17	NA	83921478	83919531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_83919814_83920105_83920213_83920772_83920921_83921370
transcript_139657.nnic	chr9	-	1512	3	NNC	ENSG00000165115.15	novel	4400	16	NA	NA	-100	-15773	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	15	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCTCATTAAATGCATG	NA	False	NA	NA	False	AATAAA	-26	NA	83921565	83914468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_83915679_83920105_83920213_83921370
transcript_139658.nnic	chr9	-	673	3	Intergenic	novelGene_83	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	5	junction_2	33.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGTTACTTAATG	466	False	NA	1	True	AATAAA	-17	NA	83921056	83919531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr9_-_83919814_83920105_83920213_83920772
transcript_139659.nnic	chr9	-	609	3	Intergenic	novelGene_84	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	33.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGTTACTTAATG	316	False	NA	1	True	AATAAA	-17	NA	83921206	83919531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr9_-_83919814_83920105_83920213_83920986
transcript_139660.nnic	chr9	-	584	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	-100	-20836	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_2	11	177	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGTTACTTAATG	NA	False	NA	1	True	AATAAA	-17	NA	83921565	83919531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_83919814_83920105_83920213_83921370
transcript_139661.known	chr9	-	2468	4	FSM	ENSG00000165118.15	ENST00000376344.8	2468	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAATGGATTATTTCAT	3	True	NA	NA	False	AATAAA	-23	NA	83956742	83938310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163
transcript_139662.known	chr9	-	2067	5	FSM	ENSG00000165118.15	ENST00000314700.5	2067	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGGAATGGATTATTT	50	False	NA	NA	False	AATAAA	-20	NA	83956986	83938313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163_83956255_83956896
transcript_139689.known	chr9	-	2038	17	FSM	ENSG00000165119.21	ENST00000360384.9	2038	17	0	0	0	0	multi-exon	FALSE	canonical	3	3360	junction_16	1587.19707616721	26683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	361	False	NA	-12	True	AATAAA	-14	NA	83980250	83968908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_139690.known	chr9	-	2652	16	FSM	ENSG00000165119.21	ENST00000351839.7	2652	16	0	0	0	0	multi-exon	FALSE	canonical	3	5714	junction_1	995.764148782231	14635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	2159	False	NA	-25	True	AATAAA	-1	NA	83978452	83968196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372
transcript_139691.known	chr9	-	2928	17	FSM	ENSG00000165119.21	ENST00000376281.8	2928	17	0	0	0	0	multi-exon	TRUE	canonical	3	5885	junction_16	1019.9985294107	16789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	7	True	NA	-6	True	AATATA	-14	NA	83980604	83968082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_139692.known	chr9	-	2889	17	FSM	ENSG00000165119.21	ENST00000376263.8	2889	17	0	0	0	0	multi-exon	FALSE	canonical	3	3360	junction_16	1493.64121858087	16874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-3	True	NA	-6	True	AATATA	-14	NA	83980215	83968082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_139693.known	chr9	-	868	2	FSM	ENSG00000165119.21	ENST00000493362.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	6876	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGTTGGGGGGGGGAAG	9825	False	NA	-71	True	NA	NA	NA	83970786	83969197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969441_83970161
transcript_139694.known	chr9	-	1283	15	FSM	ENSG00000165119.21	ENST00000457156.5	1283	15	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_8	2401.93829042721	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTGGTCAGCGGATT	0	True	NA	NA	False	TTTAAA	-32	NA	83980190	83970312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_139695.known	chr9	-	822	9	FSM	ENSG00000165119.21	ENST00000472778.5	822	9	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	2929.41610809646	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTCAGAACACTTTTTG	-5	True	NA	NA	False	CATAAA	-26	NA	83980616	83972843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_139697.nnic	chr9	+	3496	4	NNC	ENSG00000178966.17	novel	3300	3	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	130.110209694192	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	88	False	NA	89	True	ATTAAA	-21	NA	83980684	84004074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_83980892_83988328_83988405_83999708_83999798_84000950
transcript_139700.known	chr9	+	3300	3	FSM	ENSG00000178966.17	ENST00000445877.6	3300	3	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	46.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	3	True	NA	89	True	ATTAAA	-21	NA	83980804	84004074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83980892_83999708_83999798_84000950
transcript_139706.known	chr9	+	3420	3	FSM	ENSG00000178966.17	ENST00000325875.7	3420	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	122.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	-4	True	NA	89	True	ATTAAA	-21	NA	83980797	84004074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83981005_83999708_83999798_84000950
transcript_13971.nic	chr1	+	806	5	NIC	ENSG00000154309.9	novel	890	6	NA	NA	-27	0	intron_retention	FALSE	canonical	3	12	junction_2	32.7184962979658	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	227	False	NA	17	True	AATAAA	-17	NA	222814994	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815079_222823883_222823946_222827427_222827602_222835118_222835216_222836995
transcript_139710.nnic	chr9	+	1557	2	NNC	ENSG00000178966.17	novel	3300	3	NA	NA	-113	-14396	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAATAAAATAAAAAAGAT	88	False	NA	NA	False	AAAAAG	-14	NA	83980684	83989678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_83980892_83988328
transcript_139714.known	chr9	-	4464	26	FSM	ENSG00000135049.16	ENST00000357081.8	4464	26	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_16	29.2173646997808	488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGTCATCTTCTTT	-23	True	NA	-3	True	AATAAA	-20	NA	85741954	85546538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_85547287_85575314_85575476_85578919_85579097_85585462_85585595_85586830_85586961_85588297_85588479_85589527_85589682_85592559_85592705_85596361_85596450_85618982_85619132_85619214_85619302_85621201_85621286_85632661_85633375_85642826_85642944_85646320_85646419_85655142_85655321_85657434_85657644_85660935_85660974_85669484_85669579_85672549_85672682_85677435_85677583_85678334_85678399_85681267_85681336_85692688_85692814_85712501_85712567_85741774
transcript_139722.known	chr9	+	5813	23	FSM	ENSG00000135040.16	ENST00000361671.10	5813	23	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	35.1589366512453	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATCATAAAATGCAAG	-8	True	NA	NA	False	NA	NA	NA	85941145	86025462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_139727.nnic	chr9	+	2702	23	NNC	ENSG00000135040.16	novel	5813	23	NA	NA	43	-3164	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	61.5430374172859	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTGCTGGAGATGAAAA	14	False	NA	17	True	AATAAA	-20	NA	85941224	86022298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_85941406_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_139739.nic	chr9	+	1905	18	ISM	ENSG00000135040.16	ENST00000361671.10	5813	23	-71	8791	-71	-8791	5prime_fragment	TRUE	canonical	3	210	junction_1	36.333042336115	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGCTGTGGATTATTT	NA	False	NA	NA	False	AGTAAA	-19	NA	85941074	86016671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_139744.nnic	chr9	+	1940	18	NNC	ENSG00000135040.16	novel	5813	23	NA	NA	-10	-8791	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	67.5122954327734	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTGCTGTGGATTATTT	18	True	NA	NA	False	AGTAAA	-19	NA	85941171	86016671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_85941406_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_13975.nic	chr1	+	480	5	NIC	ENSG00000154309.9	novel	362	4	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	27.7882619103822	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	227	False	NA	17	True	AATAAA	-17	NA	222814994	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222836995_222837067_222837218
transcript_139770.known	chr9	-	3046	10	FSM	ENSG00000135052.16	ENST00000388712.7	3046	10	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_3	95.3272466329395	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTCACAGCTCTG	-10	True	NA	52	True	AATAAA	-18	NA	86099558	86026145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
transcript_139771.known	chr9	-	3022	10	FSM	ENSG00000135052.16	ENST00000388711.7	3022	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	393.445401486175	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTGTCACAGCTCT	-7	True	NA	51	True	AATAAA	-17	NA	86100149	86026146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86100024
transcript_13978.known	chr1	+	771	5	FSM	ENSG00000154309.9	ENST00000435378.6	771	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	36.0026040724834	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTTTTTTTTGGTATT	16	True	NA	18	True	AATAAA	-18	NA	222815058	222837385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815079_222823855_222823946_222827427_222827602_222835118_222835216_222836995
transcript_139781.known	chr9	-	813	4	FSM	ENSG00000135070.15	ENST00000311534.6	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	175.307349151901	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGACAGGACATCGTG	438	False	NA	81	True	NA	NA	NA	86282108	86265678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86281968
transcript_139787.known	chr9	-	1967	4	FSM	ENSG00000135070.15	ENST00000375991.9	1967	4	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_3	20.5318181259127	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTTATTATTGAGGG	8	True	NA	NA	False	ATTAAA	-30	NA	86282538	86264545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86282377
transcript_139790.known	chr9	-	5603	27	FSM	ENSG00000083223.18	ENST00000375963.8	5603	27	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	10.4861842045425	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-6	True	NA	-8	True	AATAAA	-21	NA	86354410	86287732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86288745_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86318957_86319059_86319583_86319671_86322324_86322476_86322872_86323961_86325333_86325515_86328339_86328493_86337418_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_139791.known	chr9	-	2245	2	FSM	ENSG00000269994.3	ENST00000669870.1	2245	2	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATTACTTTTTATCCA	NA	False	NA	-34	True	AATAGA	-5	NA	87042419	87008514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87010211_87041870
transcript_139792.known	chr9	+	2499	16	FSM	ENSG00000196730.13	ENST00000469067.5	2499	16	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_10	31.8200495844296	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAATAAACCACTC	11	True	NA	NA	False	AATAGA	-34	NA	87497735	87650511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920
transcript_139793.known	chr9	+	626	3	FSM	ENSG00000196730.13	ENST00000495182.5	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	233.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTGTGTTTTATCT	-2	True	NA	NA	False	AATAAA	-14	NA	87497834	87507002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87498108_87498969_87499140_87506819
transcript_139797.known	chr9	+	579	2	FSM	ENSG00000196730.13	ENST00000470267.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGCACAGTATATTGAT	1	True	NA	NA	False	NA	NA	NA	87497911	87499352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87498108_87498969
transcript_139799.nnic	chr9	+	770	3	Genic_Genomic	ENSG00000219928.2_ENSG00000288968.1	novel	174	1	NA	NA	134	101	multi-exon	FALSE	non_canonical	0	0	junction_1	0	631	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGTTGAATAAACGAAGGC	106	False	NA	NA	False	AATAAA	-26	NA	87411025	87525576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_+_87411295_87413277_87413465_87525262
transcript_13980.nic	chr1	+	855	5	NIC	ENSG00000154309.9	novel	890	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	12	junction_2	32.8052968284087	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	-4	True	NA	17	True	AATAAA	-17	NA	222815038	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815172_222823883_222823946_222827427_222827602_222835118_222835216_222836995
transcript_139800.known	chr9	+	174	1	FSM	ENSG00000219928.2	ENST00000401543.2	174	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCTTCCTTCAAAGGAT	32	False	NA	NA	False	NA	NA	NA	87525301	87525475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87525300_87525500
transcript_139801.known	chr9	+	1536	9	FSM	ENSG00000135047.16	ENST00000340342.11	1536	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.568523436946	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGTGGGGCTTCTTTCT	3	True	NA	20	True	AATAAA	-16	NA	87726121	87731391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726254_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_139803.known	chr9	+	1593	9	FSM	ENSG00000135047.16	ENST00000676881.1	1593	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.568523436946	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	3	True	NA	22	True	AATAAA	-18	NA	87726121	87731393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726309_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_139806.known	chr9	+	2129	8	FSM	ENSG00000135047.16	ENST00000679149.1	2129	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	82.1787499222002	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGCTGTGCCAGTGGCT	2929	False	NA	10	True	AATAAA	-24	NA	87725550	87731466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726309_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_139809.known	chr9	+	1373	7	FSM	ENSG00000135047.16	ENST00000677864.1	1373	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	115.336343891343	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	0	True	NA	13	True	AATAAA	-27	NA	87726118	87731469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726254_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_139813.known	chr9	+	1654	8	FSM	ENSG00000135047.16	ENST00000343150.10	1654	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	80.8326565649487	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	0	True	NA	13	True	AATAAA	-27	NA	87726118	87731469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_139814.known	chr9	+	1315	7	FSM	ENSG00000135047.16	ENST00000342020.6	1315	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	118.741198504235	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	0	True	NA	22	True	AATAAA	-18	NA	87726118	87731393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726254_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87731007
transcript_139818.known	chr9	-	2149	8	FSM	ENSG00000156345.18	ENST00000325303.9	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	18.0611207191761	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	10	True	NA	NA	False	AATAAA	-29	NA	87974533	87966440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970567_87970631_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_13982.known	chr1	+	764	5	FSM	ENSG00000154309.9	ENST00000434872.2	764	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.0558799661761	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTGTTTTTTTTGGTA	-22	True	NA	16	True	AATAAA	-16	NA	222815068	222837383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222823883_222823946_222830928_222831043_222835118_222835216_222836995
transcript_139822.known	chr9	-	2301	7	FSM	ENSG00000156345.18	ENST00000375883.7	2301	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	19.4164878389476	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAGACTAGAGAAACT	NA	False	NA	NA	False	AATAAA	-24	NA	87974753	87966445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_139823.known	chr9	-	2021	7	FSM	ENSG00000156345.18	ENST00000486228.7	2021	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	16.1804065324563	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGTAGCACCAGGCAT	-9	True	NA	NA	False	NA	NA	NA	87974701	87966881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970567_87970898_87971146_87971336_87973921_87974036_87974371
transcript_139826.known	chr9	-	1907	6	FSM	ENSG00000156345.18	ENST00000375871.8	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	18.9799894625893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAACAGACTAGAGA	205	False	NA	NA	False	AATAAA	-20	NA	87974487	87966449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87967660_87969193_87969350_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_139827.nnic	chr9	-	1744	6	NNC	ENSG00000156345.18	novel	2149	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	23.3460917500125	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTTTTTCCTTATT	10	True	NA	0	True	AATAAA	-17	NA	87974533	87966610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_87967660_87969193_87969302_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_139835.known	chr9	-	1860	7	FSM	ENSG00000156345.18	ENST00000605159.5	1860	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.7431247465275	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTTTTTCCTTATT	187	False	NA	0	True	AATAAA	-17	NA	87974505	87966610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87967632_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_139837.known	chr9	+	494	1	FSM	ENSG00000217716.3	ENST00000439253.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGGAGAGGATTCTT	NA	False	NA	NA	False	NA	NA	NA	88016299	88016793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88016300_88016800
transcript_139839.nnic	chr9	-	806	3	NNC	ENSG00000287750.2	novel	588	3	NA	NA	-223	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAATAATTCCTGCTT	607	False	NA	NA	False	AATAAA	-17	NA	88077276	88066434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_88066782_88068643_88068742_88076915
transcript_13984.nic	chr1	+	529	5	NIC	ENSG00000154309.9	novel	517	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	27.9910700045568	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	-4	True	NA	17	True	AATAAA	-17	NA	222815038	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995_222837067_222837218
transcript_139847.nnic	chr9	-	510	2	FSM	ENSG00000287750.2	ENST00000692550.1	484	2	-26	0	-26	0	multi-exon	FALSE	canonical	3	15	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAATAATTCCTGCTT	-2	True	NA	NA	False	AATAAA	-17	NA	88077885	88066434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_88066782_88077722
transcript_139850.known	chr9	+	4459	6	FSM	ENSG00000106723.17	ENST00000375859.4	4459	6	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_4	104.09149821191	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	30	True	NA	28	True	AATAAA	-15	NA	88388443	88478694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_139856.known	chr9	+	706	5	FSM	ENSG00000106723.17	ENST00000485565.6	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	309.493134011079	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCGTCTATTTCATC	38	True	NA	NA	False	NA	NA	NA	88388451	88475203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88468371_88468606_88475077
transcript_139861.known	chr9	+	814	5	FSM	ENSG00000106723.17	ENST00000485804.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	290.831996176487	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTACGATTTGGTG	16	True	NA	NA	False	NA	NA	NA	88388429	88475245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88388539_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_139863.known	chr9	+	1234	2	FSM	ENSG00000130045.17	ENST00000375854.8	1154	2	-73	-7	0	7	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGCCTTCTTTCTCA	NA	False	NA	NA	False	AATAAA	-30	NA	88535104	88544980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88535737_88544378
transcript_139871.known	chr9	-	585	3	FSM	ENSG00000224945.1	ENST00000429700.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCACGGCCTCTGCTGG	NA	False	NA	NA	False	NA	NA	NA	89109934	89088886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_89088936_89109047_89109129_89109479
transcript_13988.known	chr1	+	517	5	FSM	ENSG00000154309.9	ENST00000457636.5	517	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.1686991265398	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTGTTTTTTTTGGTA	-13	True	NA	16	True	AATAAA	-16	NA	222815077	222837383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222823855_222823946_222835118_222835216_222836995_222837067_222837218
transcript_139880.known	chr9	+	616	3	FSM	ENSG00000123975.5	ENST00000314355.7	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	4605	junction_1	92	45783	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCAAGTTTTTGA	-2	True	NA	26	True	AATAAA	-19	NA	89311194	89316703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89311352_89315169_89315298_89316372
transcript_139882.known	chr9	+	3481	17	FSM	ENSG00000187742.15	ENST00000375807.8	3481	17	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	59.2338783446602	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTCTCAGTGGTC	-18	True	NA	37	True	AATAAA	-36	NA	89318499	89359663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_139884.known	chr9	+	3320	17	FSM	ENSG00000187742.15	ENST00000339901.8	3320	17	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	76.7242424205023	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	1	True	NA	16	True	AATAAA	-15	NA	89318518	89359642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_139891.nic	chr9	+	1244	8	ISM	ENSG00000187742.15	ENST00000375807.8	3481	17	-25	21153	-25	0	5prime_fragment	FALSE	canonical	3	146	junction_6	59.8515169534796	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	1	True	NA	NA	False	AAGAAA	-4	NA	89318474	89338510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_139892.nic	chr9	+	1130	8	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_6	71.3971359398132	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	1	True	NA	NA	False	AAGAAA	-4	NA	89318474	89338510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_139893.nic	chr9	+	1123	8	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-44	21132	-25	0	5prime_fragment	FALSE	canonical	3	89	junction_2	86.765459129536	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	1	True	NA	NA	False	AAGAAA	-4	NA	89318474	89338510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_139894.nic	chr9	+	1009	8	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_2	94.0234447532386	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	1	True	NA	NA	False	AAGAAA	-4	NA	89318474	89338510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_139904.nic	chr9	+	856	2	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-44	39273	-25	-10076	5prime_fragment	FALSE	canonical	3	289	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATCCCGTTTC	1	True	NA	NA	False	NA	NA	NA	89318474	89320369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_89318613_89319651
transcript_139905.known	chr9	+	3584	17	FSM	ENSG00000187742.15	ENST00000534113.6	3584	17	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	91.9183571165194	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGCTTCTCAGTGGT	23	False	NA	36	True	AATAAA	-35	NA	89318850	89359662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89319068_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_139908.known	chr9	+	1066	4	FSM	ENSG00000130222.11	ENST00000252506.11	1066	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	16.9901932498329	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGCTCTTTATTGAGGG	0	True	NA	NA	False	AATAAA	-15	NA	89605011	89606555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89605175_89605431_89605534_89605666_89605881_89605968
transcript_139910.nnic	chr9	+	1228	5	NNC	ENSG00000237372.4	novel	1570	5	NA	NA	-924	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	3.20156211871642	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGGGTCTCTAGGTG	NA	False	NA	NA	False	AATAAA	-24	NA	89695487	89719759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_89695629_89696812_89697089_89698032_89698200_89701917_89701989_89719186
transcript_139913.nnic	chr9	+	638	4	NNC	ENSG00000237372.4	novel	822	2	NA	NA	-82	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.09901951359278	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTGGGTCTCTAGGTGT	34	False	NA	NA	False	AATAAA	-25	NA	89701568	89719760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_89701806_89701917_89701989_89719186_89719286_89719529
transcript_139914.nnic	chr9	+	1129	4	NNC	ENSG00000237372.4	novel	822	2	NA	NA	-82	19531	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	0.471404520791032	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGACCCATGTTCCTCAA	34	False	NA	NA	False	TATAAA	-12	NA	89701568	89739290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_89701806_89701917_89701989_89738023_89738163_89738608
transcript_139919.known	chr9	+	822	2	FSM	ENSG00000237372.4	ENST00000444374.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAGCGGAGGCAAGCTG	-7	True	NA	NA	False	NA	NA	NA	89701650	89719670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89701989_89719186
transcript_139928.nnic	chr9	-	1092	3	NNC	ENSG00000231107.2	novel	1096	3	NA	NA	12864	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCACATTCCCTCTGCCT	NA	False	NA	-17	True	AATAAA	-26	NA	90415090	90300895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_90301654_90383519_90383722_90414958
transcript_139929.known	chr9	-	1096	3	FSM	ENSG00000231107.2	ENST00000425666.2	1096	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCACATTCCCTCTGCCT	NA	False	NA	-17	True	AATAAA	-26	NA	90433566	90300895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_90301654_90383519_90383722_90433430
transcript_13993.nic	chr1	+	632	4	NIC	ENSG00000154309.9	novel	890	6	NA	NA	-27	0	intron_retention	FALSE	canonical	3	26	junction_1	27.7168220079832	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	227	False	NA	17	True	AATAAA	-17	NA	222814994	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222836995
transcript_139933.known	chr9	+	467	2	FSM	ENSG00000165025.15	ENST00000476708.1	467	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGCCCTTTGAGGATTT	32	False	NA	NA	False	NA	NA	NA	90801961	90844246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_90802040_90843857
transcript_139936.known	chr9	-	1574	10	FSM	ENSG00000148090.12	ENST00000375731.9	1574	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	21.5721585542884	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAATTTTTCTCTTAC	-8	True	NA	-23	True	AATAAA	-17	NA	91361918	91213822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91325317_91325405_91355882_91355971_91356087_91356156_91361627
transcript_139937.known	chr9	-	2993	13	FSM	ENSG00000169071.15	ENST00000375715.5	2993	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	69.5473459833899	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGTTTTCAAGATTAAG	3613	False	NA	NA	False	AATAAA	-17	NA	91948880	91563090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_91563330_91694319_91694412_91717306_91717397_91722525_91722581_91724153_91725108_91726540_91726744_91730909_91731156_91733121_91733437_91737390_91737519_91756070_91756102_91757271_91757560_91775740_91775819_91948606
transcript_139941.known	chr9	-	370	2	FSM	ENSG00000169071.15	ENST00000493846.1	370	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGATGAGTTATTGATT	3778	False	NA	NA	False	ATTAAA	-21	NA	91948715	91923667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_91923929_91948606
transcript_139943.known	chr9	-	686	5	FSM	ENSG00000090054.16	ENST00000488921.6	1311	5	0	625	0	-625	multi-exon	FALSE	canonical	3	5	junction_1	262.901122097263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAACTTTTATATATTCT	61	False	NA	NA	False	NA	NA	NA	92115382	92107800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92108070_92108739_92108835_92112454_92112563_92114921_92115067_92115313
transcript_139945.known	chr9	-	2783	15	FSM	ENSG00000090054.16	ENST00000262554.7	2783	15	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_4	47.4012937910056	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGTCTATTTGCATAT	-9	True	NA	-11	True	AATAAA	-14	NA	92115413	92031146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_139946.known	chr9	-	946	6	FSM	ENSG00000090054.16	ENST00000337841.4	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	238.828306530026	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGCTGGAAATAGCAT	60	False	NA	NA	False	AATAAA	-27	NA	92115383	92079060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92079567_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_139951.known	chr9	-	4443	34	FSM	ENSG00000196305.19	ENST00000683679.1	4443	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	436.012605019095	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	9	True	NA	-21	True	AATAAA	-8	NA	92293689	92210348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_139952.known	chr9	-	4300	34	FSM	ENSG00000196305.19	ENST00000683469.1	4300	34	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	401.350756511142	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATAAATGTGTTGAAAG	5166	False	92293733	-21	True	AATAAA	-8	NA	92293716	92210348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223430_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_139953.known	chr9	-	4370	34	FSM	ENSG00000196305.19	ENST00000684557.1	4370	34	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_12	390.433897220994	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGACTAGACATCTAATA	3	True	NA	-39	True	CATAAA	-28	NA	92293695	92210242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_139954.known	chr9	-	4656	34	FSM	ENSG00000196305.19	ENST00000375643.7	4656	34	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_33	354.916079269664	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGATAATTTGAGT	-2	True	NA	-3	True	AATAAA	-15	NA	92293700	92210206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_139955.known	chr9	-	4597	34	FSM	ENSG00000196305.19	ENST00000683817.1	4597	34	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_14	409.955922735431	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGACTAGACATCTAATA	5028	False	NA	-39	True	CATAAA	-28	NA	92293854	92210242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253447_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_13996.known	chr1	+	362	4	FSM	ENSG00000154309.9	ENST00000444858.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.2960963117119	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	8	True	NA	17	True	AATAAA	-17	NA	222815050	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815079_222835118_222835216_222836995_222837067_222837218
transcript_139963.nic	chr9	-	2758	20	ISM	ENSG00000196305.19	ENST00000684445.1	4403	33	-21	45993	0	-15579	5prime_fragment	FALSE	canonical	3	448	junction_19	232.195769440919	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGGCCATGGAGGCG	5166	False	92293733	NA	False	AATATA	-19	NA	92293716	92256341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_139975.nnic	chr9	-	1975	13	NIC	ENSG00000196305.19	novel	4186	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_12	526.661042955207	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	5166	False	92293733	-17	True	AATAAA	-12	NA	92293716	92210344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92293610
transcript_139976.nnic	chr9	-	2068	13	NIC	ENSG00000196305.19	novel	4406	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	566.467924707324	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-1	True	NA	-17	True	AATAAA	-12	NA	92293734	92210344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92293610
transcript_139984.known	chr9	-	4075	17	FSM	ENSG00000198000.12	ENST00000442668.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	47.7951357357629	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTTTGGTGAATG	-1	True	NA	-1	True	GATAAA	-24	NA	92325350	92297357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_139987.known	chr9	-	3136	13	FSM	ENSG00000198000.12	ENST00000432670.6	3136	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	48.2378366937085	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACGAAAAAAGAAAAGGG	-9	True	NA	NA	False	AGTAAA	-3	NA	92325358	92301816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325179
transcript_139988.nic	chr9	-	3000	12	ISM	ENSG00000198000.12	ENST00000544867.5	4598	17	-16	8136	-1	1197	5prime_fragment	FALSE	canonical	0	0	junction_6	45.5493556667149	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGAGCTACTTCTTT	-5	True	NA	NA	False	AAAAAG	-22	NA	92325354	92305752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_139994.known	chr9	-	1098	7	FSM	ENSG00000198000.12	ENST00000421075.6	1098	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.9413544959374	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTCCATTACTCCTT	0	True	NA	NA	False	AATAGA	-43	NA	92325594	92315851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325317
transcript_139995.known	chr9	-	557	6	FSM	ENSG00000198000.12	ENST00000542573.5	557	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	45.7532512505942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGACAGGAGGAGTGG	1	True	NA	NA	False	AAGAAA	-33	NA	92325348	92319287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92319357_92321667_92321747_92323235_92323352_92323440_92323504_92324022_92324210_92325305
transcript_14.known	ERCC-00039	+	724	1	FSM	ERCC-00039A	DQ883656	724	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00039_+_0_700
transcript_140.known	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_2	89.5	8562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_1485_7552_7809_10553
transcript_1400.known	chr1	-	1405	7	FSM	ENSG00000162441.12	ENST00000400903.6	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	14.46163506969	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGACCATCCCCCAGCCT	592	False	NA	NA	False	AATAAA	-17	NA	9942768	9929719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623
transcript_14000.nic	chr1	+	681	4	NIC	ENSG00000154309.9	novel	764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	28.0832096931007	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	-4	True	NA	17	True	AATAAA	-17	NA	222815038	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995
transcript_140001.nic	chr9	-	1447	4	ISM	ENSG00000198000.12	ENST00000538215.5	566	5	2	405	-1	-405	5prime_fragment	FALSE	canonical	3	65	junction_3	27.6204433144888	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATACAGGTAGAATGAC	-2	True	NA	NA	False	AAAAAG	-14	NA	92325351	92320595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_92321747_92323440_92323504_92324022_92324210_92325305
transcript_140003.known	chr9	-	4343	17	FSM	ENSG00000198000.12	ENST00000545558.5	4343	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	55.2844561676245	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTCCAGCCTAGG	-1	True	NA	-20	True	AATAAA	-13	NA	92325350	92297489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92324905
transcript_140004.known	chr9	-	3400	13	FSM	ENSG00000198000.12	ENST00000434228.5	3400	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	62.0145592224564	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTTGCAAATCAACTTA	6	True	NA	NA	False	AAAAAG	-23	NA	92325343	92306949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92319942_92320380_92321667_92321747_92323235_92323352_92323440_92323504_92324022_92324210_92325305
transcript_140005.known	chr9	-	3393	16	FSM	ENSG00000198000.12	ENST00000542053.5	3393	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	57.2466787003598	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGTCAGCTGGTTTTGA	16	True	NA	NA	False	CATAAA	-31	NA	92325333	92297835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92325305
transcript_140006.known	chr9	+	8293	8	FSM	ENSG00000188312.14	ENST00000375587.8	8293	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	5.79232426648951	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGGGCCTCACACATC	11	True	NA	NA	False	AATAAA	-17	NA	92325952	92620529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_92326106_92332169_92332352_92337540_92337630_92345698_92345788_92379762_92379860_92611313_92611394_92612522_92612615_92613018
transcript_140011.known	chr9	+	570	5	FSM	ENSG00000188312.14	ENST00000618653.1	570	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	2.54950975679639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGTCTTTGAATTTAA	14	False	NA	NA	False	TTTAAA	-16	NA	92325998	92379865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_92326106_92332169_92332352_92337540_92337630_92345698_92345788_92379762
transcript_140012.known	chr9	-	612	4	FSM	ENSG00000106823.13	ENST00000395534.2	612	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACAGAGATTTAGCTAAG	-3	True	NA	NA	False	NA	NA	NA	92536655	92517687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92517876_92522574_92522894_92535932_92535983_92536600
transcript_140013.known	chr9	-	1606	3	FSM	ENSG00000106823.13	ENST00000375540.5	1606	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTCACAAATTCTCAGAAA	-10	True	NA	NA	False	AATAAA	-20	NA	92536055	92516711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92517876_92522574_92522894_92535932
transcript_140015.known	chr9	-	4268	13	FSM	ENSG00000127080.10	ENST00000287996.8	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	14.0185888495716	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCATCCTCCACGTT	12	True	NA	NA	False	AATAAA	-21	NA	92670131	92613182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635309_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
transcript_140019.known	chr9	-	4784	5	FSM	ENSG00000127081.14	ENST00000375495.8	4784	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	8.52569645248997	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGTCTGGATAATAT	2	True	NA	NA	False	ATTAAA	-14	NA	92878038	92844181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92875014_92875060_92877889
transcript_140022.known	chr9	-	2836	4	FSM	ENSG00000127081.14	ENST00000332591.6	2836	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	10.7082522694727	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCAGTCTTTCTTGTTTC	18	True	NA	-11	True	AGTAAA	-16	NA	92878022	92846068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92877889
transcript_140025.known	chr9	+	461	3	FSM	ENSG00000226668.5	ENST00000425090.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTTCTGTAAT	1339	False	NA	NA	False	AATAAA	-33	NA	92883910	92899608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_92884001_92884565_92884627_92899298
transcript_140028.known	chr9	+	1196	5	FSM	ENSG00000157303.11	ENST00000375472.8	1196	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	7.66077672302228	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTACCTCAGCATCTT	-10	True	NA	27	True	AATAAA	-39	NA	93058700	93085133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93079470_93079603_93084536
transcript_140029.known	chr9	+	1076	4	FSM	ENSG00000157303.11	ENST00000617293.4	1076	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	16.779617264871	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTACCTCAGCATCT	-23	True	NA	26	True	AATAAA	-38	NA	93058687	93085132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93084536
transcript_140032.known	chr9	+	857	6	FSM	ENSG00000165233.18	ENST00000375464.7	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	47.0463601142533	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	-28	True	NA	11	True	ATTAAA	-17	NA	93096216	93113283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_140033.known	chr9	+	759	6	FSM	ENSG00000165233.18	ENST00000490488.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	57.1895095275349	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTCAGCCTGCCTC	8	False	NA	0	True	ATTAAA	-6	NA	93096314	93113272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93096353_93107673_93107828_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_140035.known	chr9	+	660	5	FSM	ENSG00000165233.18	ENST00000468781.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	94.0132969318702	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTATAATTTGTGTAA	33	True	NA	27	True	NA	NA	NA	93096277	93113207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93112217_93112290_93112991
transcript_140038.nic	chr9	+	798	5	NIC	ENSG00000165233.18	novel	857	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_3	97.4858964158406	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	-18	True	NA	11	True	ATTAAA	-17	NA	93096226	93113283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_93096353_93107673_93107828_93110567_93110722_93112217_93112290_93112991
transcript_140039.nnic	chr9	+	644	4	NIC	ENSG00000165233.18	novel	857	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	117.348483870337	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	-18	True	NA	11	True	ATTAAA	-17	NA	93096226	93113283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_93096353_93107673_93107828_93112217_93112290_93112991
transcript_14004.known	chr1	+	373	4	FSM	ENSG00000154309.9	ENST00000669958.1	373	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.2960963117119	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCCTTGTTTTTTTTG	1	True	NA	13	True	AATAAA	-13	NA	222815128	222837380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222835118_222835216_222836995_222837067_222837218
transcript_140040.known	chr9	-	1237	4	FSM	ENSG00000131669.10	ENST00000375446.5	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	16.8193010820572	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATCTCCCTGTTCCC	-4	True	NA	-28	True	AATAAA	-25	NA	93134251	93121495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93134142
transcript_140050.known	chr9	+	559	2	FSM	ENSG00000165238.17	ENST00000460335.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGCTGGAGTTTTGTT	NA	False	NA	17	True	AGTAAA	-17	NA	93308500	93309195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93308585_93308720
transcript_140053.known	chr9	-	1154	5	FSM	ENSG00000204352.4	ENST00000648864.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	24.6513184231594	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTGCAAATGAAACCT	213	False	NA	NA	False	AATAAA	-17	NA	93346414	93318198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073
transcript_140058.nic	chr9	-	1778	4	NIC	ENSG00000188938.17	novel	1553	4	NA	NA	773	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	126.093439780012	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAATCAAGTGAGTTTTT	1089	False	NA	-19	True	AGTAAA	-19	NA	93452484	93446499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_93447698_93448368_93448490_93450478_93450600_93452146
transcript_140059.known	chr9	-	1553	4	FSM	ENSG00000188938.17	ENST00000520470.5	1553	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	129.740767173108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGTTTTTATCTTTTA	316	False	NA	NA	False	NA	NA	NA	93453257	93446904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93448368_93448490_93450478_93450600_93452739
transcript_140060.known	chr9	-	1905	3	FSM	ENSG00000188938.17	ENST00000479094.5	1905	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGAGTTTTTTTTTTA	-16	True	NA	-13	True	AGTAAA	-25	NA	93451524	93446493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93450478_93450600_93450944
transcript_140062.known	chr9	-	5922	3	FSM	ENSG00000188938.17	ENST00000375412.11	5922	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTTAAAACATTA	-8	True	NA	-25	True	AATAAA	-16	NA	93453581	93443331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93450478_93450600_93452146
transcript_140063.known	chr9	-	1432	3	FSM	ENSG00000188938.17	ENST00000483149.6	1432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGTTTTTATCTTTTA	316	False	NA	NA	False	NA	NA	NA	93453257	93446904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93450478_93450600_93452739
transcript_140065.known	chr9	+	1494	4	FSM	ENSG00000231990.2	ENST00000669339.1	1494	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTGACCTTGCCACTT	NA	False	NA	NA	False	AATAAA	-27	NA	93808348	93858340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93808565_93825710_93826516_93857007_93857251_93858110
transcript_140072.known	chr9	+	2374	5	FSM	ENSG00000175787.17	ENST00000395395.7	2374	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.68954408012983	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACAGTCACACTACACA	-14	True	NA	NA	False	NA	NA	NA	94259297	94301829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94259346_94278757_94278846_94292340_94292468_94292973_94293070_94299814
transcript_140074.known	chr9	+	509	2	FSM	ENSG00000269929.4	ENST00000660581.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCGGTTTCGGGTATTT	12	True	NA	NA	False	AATAAA	-17	NA	94166289	94200902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94166382_94200485
transcript_140075.nnic	chr9	+	564	2	NNC	ENSG00000175787.17	novel	396	3	NA	NA	-6	-30855	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGATGTAGTTCTTT	3	True	NA	NA	False	AGTAAA	-15	NA	94259314	94261768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_94259346_94261235
transcript_140076.known	chr9	+	2716	4	FSM	ENSG00000175787.17	ENST00000480716.1	2716	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.46337971105226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTGTGAATATAATG	17	False	NA	11	True	AATAAA	-19	NA	94278757	94295846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94278846_94292340_94292468_94292973_94293070_94293441
transcript_140078.known	chr9	-	1487	8	FSM	ENSG00000165140.12	ENST00000415431.5	1487	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.45384493374854	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTCTCCCTTGCT	9	True	NA	NA	False	AATAAA	-14	NA	94640249	94603140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140_94639335_94640043
transcript_140080.nic	chr9	-	1257	7	NIC	ENSG00000165140.12	novel	1487	8	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	3.53160335006952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	80	False	NA	NA	False	AATAAA	-22	NA	94640205	94603132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94640043
transcript_140091.nnic	chr9	+	1103	3	NNC	ENSG00000231806.4	novel	1193	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTACAGTTATTTTG	442	False	NA	NA	False	NA	NA	NA	94555044	94568141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_94555311_94558883_94558969_94567389
transcript_140098.known	chr9	+	3974	3	FSM	ENSG00000231806.4	ENST00000644721.1	3974	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGTAAATCAAAAACTTAA	1	True	NA	NA	False	AATAAA	-3	NA	94555082	94570916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94555346_94558968_94559153_94567389
transcript_1401.known	chr1	+	514	2	FSM	ENSG00000173614.14	ENST00000492735.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACTAGAGAACCGG	27	True	NA	NA	False	NA	NA	NA	9943487	9972503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9943516_9972017
transcript_140100.known	chr9	+	1164	3	FSM	ENSG00000231806.4	ENST00000452148.3	1193	3	15	14	-14	-14	multi-exon	FALSE	canonical	2	10	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGTGTG	-13	True	NA	NA	False	NA	NA	NA	94555068	94568127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94555311_94558968_94559153_94567389
transcript_140106.known	chr9	+	2820	15	FSM	ENSG00000148120.18	ENST00000297979.9	2820	15	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_5	13.2603444409969	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	14	True	NA	16	True	AATAAA	-23	NA	94726711	95087159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_140108.nic	chr9	+	1069	7	NIC	ENSG00000148120.18	novel	919	6	NA	NA	266	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	13.8373488147919	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	16	False	NA	16	True	AATAAA	-23	NA	95004182	95087159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_140110.nic	chr9	+	920	6	NIC	ENSG00000148120.18	novel	919	6	NA	NA	266	-4	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	14.3052437937981	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACGTGTTTGCTTCTA	16	False	NA	12	True	AATAAA	-19	NA	95004182	95087155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_140112.nnic	chr9	+	902	6	NNC	ENSG00000148120.18	novel	919	6	NA	NA	-528	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.2977831301844	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACGTGTTTGCTTCTA	240	False	NA	12	True	AATAAA	-19	NA	95004451	95087155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_95004538_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_140120.known	chr9	-	4592	15	FSM	ENSG00000158169.13	ENST00000289081.8	4592	15	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	8.81441305765849	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATCCATTAAATATT	-5	True	NA	0	True	AATAAA	-19	NA	95317709	95099053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_140121.known	chr9	-	4533	15	FSM	ENSG00000158169.13	ENST00000375305.6	4533	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	15.025997878507	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTGTATCCATTAAATAT	450	False	NA	-1	True	AATAAA	-18	NA	95317254	95099054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317128
transcript_140127.known	chr9	-	2387	14	FSM	ENSG00000158169.13	ENST00000490972.7	2387	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	13.9402783669031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCACGTATGTATTTGA	33	False	NA	NA	False	AATAAA	-18	NA	95317671	95110511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95111346_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_140129.nnic	chr9	-	784	4	NNC	ENSG00000158169.13	novel	652	7	NA	NA	-33	20324	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	3.55902608401044	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGGGATTTTGTAGAG	-4	True	NA	NA	False	TATAAA	-19	NA	95426829	95394509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_95394885_95397202_95397284_95411455_95411678_95426723
transcript_140132.nnic	chr9	-	1631	3	NNC	ENSG00000158169.13	novel	1404	2	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTCTTT	-5	True	NA	-5	True	AATAAA	-19	NA	95426830	95414832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_95416165_95423100_95423293_95426723
transcript_140133.known	chr9	-	1404	2	FSM	ENSG00000158169.13	ENST00000433644.2	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTATTCTT	29	False	NA	-6	True	AATAAA	-18	NA	95426796	95414833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95416165_95426723
transcript_140136.known	chr9	+	476	1	FSM	ENSG00000271659.1	ENST00000604650.1	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTCTTTCTTTCATA	4596	False	NA	NA	False	AGTAAA	-15	NA	95514044	95514520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_95514000_95514500
transcript_140140.nnic	chr9	-	658	3	NNC	ENSG00000175611.13	novel	665	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGAGTCCTGGTGTTT	13	True	NA	1	True	AATAAA	-22	NA	95875556	95870282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_95870442_95874979_95875148_95875225
transcript_140141.known	chr9	-	1269	3	FSM	ENSG00000175611.13	ENST00000321517.3	1269	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTGAGTCCTGGTGTT	11	True	NA	0	True	AATAAA	-21	NA	95875976	95870283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95870442_95874508_95874623_95874979
transcript_140142.known	chr9	-	962	2	FSM	ENSG00000175611.13	ENST00000670189.2	1384	2	422	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTTAAAGAGTAATT	-18	True	NA	NA	False	AATAAA	-13	NA	95875587	95870087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95870442_95874979
transcript_140144.known	chr9	-	1148	2	FSM	ENSG00000175611.13	ENST00000671508.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATCATACTGCATAT	-1	True	NA	37	True	NA	NA	NA	95875461	95870246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95870442_95874508
transcript_140146.known	chr9	+	4564	14	FSM	ENSG00000182150.19	ENST00000288985.12	4564	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	11.2896244978199	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGTCTGCATTCTATA	11	True	NA	NA	False	AATAAA	-18	NA	95875700	95968840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561
transcript_140147.known	chr9	+	2186	2	FSM	ENSG00000182150.19	ENST00000665077.3	2186	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAAATAATGCTACTGT	18	False	NA	NA	False	AAAAAG	-16	NA	95875707	95882677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_95876085_95880868
transcript_140148.known	chr9	-	1623	12	FSM	ENSG00000130958.13	ENST00000253270.13	1623	12	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_8	28.1515966988413	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCCTCATCATGTGAT	-9	True	NA	-10	True	AATAAA	-13	NA	96383711	96320709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96321342_96321997_96322081_96324090_96324170_96336716_96336785_96343903_96343997_96345298_96345402_96351102_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
transcript_14015.known	chr1	+	556	3	FSM	ENSG00000154309.9	ENST00000426045.5	556	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTGTTATGTGAGAG	-6	True	NA	-28	True	NA	NA	NA	222815036	222837339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815079_222835118_222835216_222836922
transcript_140150.known	chr9	-	886	6	FSM	ENSG00000130958.13	ENST00000375257.2	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	31.4133729484753	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGCTGATTTATTT	24	True	NA	-1	True	NA	NA	NA	96383678	96350748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96351172_96352037_96352110_96360153_96360222_96364463_96364551_96368271_96368306_96383476
transcript_140151.known	chr9	-	654	1	FSM	ENSG00000286835.1	ENST00000658405.1	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTGTAATGAATGAAT	1086	False	NA	NA	False	AATAAA	-14	NA	96417377	96416723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96416700_96417400
transcript_140156.known	chr9	+	2651	8	FSM	ENSG00000130956.14	ENST00000375249.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	16.3445054113869	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTGTAGAGAAAACAGT	-19	True	NA	15	True	AATAAA	-20	NA	96450168	96491336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96450629_96458378_96458542_96465336_96465499_96465709_96465779_96471010_96471095_96484461_96484634_96488088_96488275_96489981
transcript_140157.known	chr9	-	2899	6	FSM	ENSG00000158122.12	ENST00000375234.8	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	7.95989949685296	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	-14	True	NA	NA	False	AATAAA	-21	NA	96655317	96639576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655089
transcript_140158.known	chr9	-	2723	6	FSM	ENSG00000158122.12	ENST00000446045.1	2723	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	19.9037684873996	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	0	True	NA	NA	False	AATAAA	-21	NA	96655303	96639576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655251
transcript_140159.known	chr9	-	6507	6	FSM	ENSG00000081386.13	ENST00000223428.9	6507	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	11.2712022428843	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	-8	True	NA	-3	True	AATAAA	-20	NA	96778087	96754552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
transcript_140163.known	chr9	-	675	5	FSM	ENSG00000081386.13	ENST00000374641.3	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	12.5698050899765	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCACTTTAGGGGTGAAC	NA	False	NA	NA	False	NA	NA	NA	96778129	96763066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
transcript_140166.known	chr9	+	841	4	FSM	ENSG00000224848.3	ENST00000666834.2	897	4	54	2	17	0	multi-exon	FALSE	canonical	3	11	junction_1	4.49691252107735	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	24	False	NA	6	True	AATAAA	-14	NA	96687076	96773977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687108_96687197_96687325_96720965_96721131_96773459
transcript_140168.nic	chr9	+	757	3	NIC	ENSG00000224848.3	novel	897	4	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_2	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	NA	False	NA	6	True	AATAAA	-14	NA	96686995	96773977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_96687108_96687197_96687325_96773459
transcript_14017.known	chr1	+	543	3	FSM	ENSG00000154309.9	ENST00000450784.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	38	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	-21	True	NA	17	True	AATAAA	-17	NA	222815021	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815079_222835118_222835216_222836995
transcript_140170.known	chr9	+	774	3	FSM	ENSG00000224848.3	ENST00000656729.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	2	True	NA	6	True	AATAAA	-14	NA	96687054	96773977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687146_96720965_96721131_96773459
transcript_140172.nnic	chr9	+	1599	3	NIC	ENSG00000224848.3	novel	1301	3	NA	NA	-3	4311	intron_retention	FALSE	canonical	0	0	junction_2	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTCAAAATGGGGAATC	-8	True	NA	NA	False	ATTAAA	-23	NA	96687044	96727496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_96687325_96720965_96721131_96726342
transcript_140174.known	chr9	+	1299	3	FSM	ENSG00000224848.3	ENST00000661289.2	1301	3	2	0	2	0	multi-exon	FALSE	canonical	3	16	junction_1	3	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAACTGTATTAATAA	-3	True	NA	NA	False	AATAAA	-2	NA	96687049	96774318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687325_96720965_96721131_96773459
transcript_140175.known	chr9	+	766	2	FSM	ENSG00000224848.3	ENST00000653137.2	785	2	17	2	17	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	24	False	NA	6	True	AATAAA	-14	NA	96687076	96773977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687325_96773459
transcript_140176.known	chr9	-	4442	6	FSM	ENSG00000196597.13	ENST00000481138.6	4442	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	12.9522198869537	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATACCACATTCCCT	-3	True	NA	NA	False	NA	NA	NA	96854514	96816268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96819779_96827079_96827182_96844889_96845017_96851946_96852006_96852852_96853070_96854087
transcript_140178.known	chr9	-	932	5	FSM	ENSG00000196597.13	ENST00000478850.5	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	10.1242283656583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACAATTCAGACTCTGGG	151	False	NA	NA	False	AGTAAA	-43	NA	96854360	96819407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96819779_96827079_96827182_96844889_96845017_96851946_96852006_96854087
transcript_140179.nnic	chr9	-	499	3	Fusion	ENSG00000196312.15_ENSG00000196597.13	novel	698	6	NA	NA	23960	-7137	multi-exon	FALSE	canonical	0	0	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGTTCTGTTCTACCA	NA	False	NA	NA	False	TATAAA	-5	NA	96918770	96860119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_-_96860415_96861527_96861604_96918642
transcript_140186.known	chr9	-	4497	9	FSM	ENSG00000136943.12	ENST00000681927.1	4497	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	890.940505519308	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-1	True	NA	2	True	AGTAAA	-19	NA	97039142	97029676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038410_97038549_97039070
transcript_14019.known	chr1	+	621	3	FSM	ENSG00000154309.9	ENST00000661663.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	19	True	NA	17	True	AATAAA	-17	NA	222815109	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222835118_222835216_222836922
transcript_140193.known	chr9	-	1512	8	FSM	ENSG00000136943.12	ENST00000681737.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	706.695269604681	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	1	True	NA	-26	True	AATAAA	-19	NA	97039140	97032654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038937
transcript_14020.known	chr1	+	445	3	FSM	ENSG00000154309.9	ENST00000420335.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	38	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGAGCTGTCTCTCCAC	1	True	NA	-67	True	NA	NA	NA	222815128	222837300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222835118_222835216_222836995
transcript_140201.known	chr9	-	1372	8	FSM	ENSG00000136943.12	ENST00000680221.1	1372	8	0	0	0	0	multi-exon	TRUE	canonical	2	154	junction_4	710.677141886525	5477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	2	True	NA	-26	True	AATAAA	-19	NA	97039139	97032654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036742_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_140202.known	chr9	-	1715	7	FSM	ENSG00000136943.12	ENST00000680159.1	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	169.532363347599	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	483	False	NA	-26	True	AATAAA	-19	NA	97039174	97032654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97038054_97039070
transcript_140203.known	chr9	-	2478	6	FSM	ENSG00000136943.12	ENST00000680435.1	2478	6	0	0	0	0	multi-exon	FALSE	canonical	3	1952	junction_2	185.675415712474	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTGAAATAAATTTTAAT	2	True	NA	29	True	AAAAAG	-12	NA	97039139	97032685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97036748_97037251_97037399_97037492_97038054_97039070
transcript_140207.known	chr9	+	3161	16	FSM	ENSG00000254876.5	ENST00000375204.2	3161	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	17.1023065370987	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTGAGTATGAATTCA	16	True	NA	NA	False	AATAAA	-23	NA	97238482	97297314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97238568_97246095_97246187_97250791_97250844_97251540_97251558_97276568_97276698_97277555_97277627_97279361_97279474_97281515_97281670_97287659_97287736_97290583_97290666_97290853_97290903_97291370_97291488_97292555_97292676_97293946_97294111_97294844_97294992_97295619
transcript_14024.known	chr1	+	583	3	FSM	ENSG00000154309.9	ENST00000663328.2	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	231	False	NA	17	True	AATAAA	-17	NA	222815358	222837384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815456_222835118_222835216_222836995
transcript_14027.known	chr1	-	3127	10	FSM	ENSG00000143502.16	ENST00000681669.1	3127	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	5.26577582714346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTTTGAAGCGTGACT	122	False	NA	NA	False	ATTAAA	-14	NA	223364222	223220830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_223222221_223223248_223223632_223227593_223227739_223229196_223229389_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223363846_223363939_223364056
transcript_14032.known	chr1	-	1056	6	FSM	ENSG00000143502.16	ENST00000344029.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.44093010681705	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCATTTTTATCCTATA	2	True	NA	NA	False	AATAAA	-17	NA	223364167	223234914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_223235101_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
transcript_140335.known	chr9	-	484	3	FSM	ENSG00000203279.5	ENST00000607322.1	484	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACAATTTCAGAAGGTGC	18	True	NA	NA	False	AATATA	-8	NA	97238700	97200474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97200566_97211372_97211488_97238422
transcript_14034.known	chr1	+	3366	21	FSM	ENSG00000162909.18	ENST00000295006.6	3366	21	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_10	17.2808419933752	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAACTTTGATAATCT	19	True	NA	NA	False	ATTAAA	-32	NA	223712538	223776018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223755479_223755650_223757368_223757381_223759269_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840_223769910_223770446_223770526_223771808_223771926_223772180_223772240_223774833
transcript_140340.known	chr9	+	281	2	FSM	ENSG00000235494.2	ENST00000420204.1	281	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTTGTAAAAGTTCTA	NA	False	NA	NA	False	AATAAA	-11	NA	97233200	97235014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97233352_97234884
transcript_140344.known	chr9	+	3688	17	FSM	ENSG00000196116.8	ENST00000355295.5	3688	17	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_8	19.4615004560286	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTACCTTTTAATTTC	-32	True	NA	NA	False	AATAAA	-20	NA	97412095	97496125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97412239_97428459_97428673_97430932_97431075_97432024_97432239_97439244_97439319_97441657_97441876_97460177_97460765_97464841_97465029_97470557_97470670_97472292_97472496_97473491_97473627_97475382_97475470_97478438_97478574_97480827_97480939_97482848_97483352_97487171_97487333_97495662
transcript_140346.nnic	chr9	+	1242	3	NNC	ENSG00000136842.14	novel	3259	10	NA	NA	31099	-1093	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCTTGGAATTTTGAAA	NA	False	NA	9	True	AATAAA	-23	NA	97586533	97600161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_97587103_97591290_97591436_97599633
transcript_140348.known	chr9	-	4116	10	FSM	ENSG00000136925.15	ENST00000341170.5	4116	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	13.6959938271591	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAAGAGTGTGCCGTTT	3	True	NA	-1	True	AATAAA	-25	NA	97633368	97600079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97602768_97604726_97604866_97605482_97605642_97606142_97606262_97610345_97610452_97611573_97611700_97617756_97617878_97625680_97625998_97627397_97627613_97633242
transcript_140352.nic	chr9	-	1179	2	ISM	ENSG00000136925.15	ENST00000375172.6	1503	10	-432	24207	-365	-16080	5prime_fragment	FALSE	canonical	3	124	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTAGCATTTCTTTTGC	NA	False	NA	NA	False	ATTAAA	-9	NA	97633733	97626924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_97627613_97633242
transcript_140353.nic	chr9	-	685	2	ISM	ENSG00000136925.15	ENST00000375172.6	1503	10	-432	24701	-365	-16574	5prime_fragment	FALSE	canonical	3	124	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTCGTTTGCAAAGAAAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	97633733	97627418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_97627613_97633242
transcript_140354.known	chr9	+	4983	23	FSM	ENSG00000136937.13	ENST00000375147.8	4983	23	0	0	0	0	multi-exon	TRUE	canonical	3	421	junction_4	40.4937501554609	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTTTCCTAATTTA	0	True	NA	16	True	AGTAAA	-1	NA	97633820	97673748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97633916_97640793_97640883_97641561_97641663_97643203_97643361_97645116_97645225_97645610_97645733_97647491_97647562_97648007_97648224_97650502_97650601_97651309_97651374_97653797_97653909_97654879_97654945_97655701_97655765_97656010_97656086_97658639_97658744_97660945_97661069_97662041_97662145_97662953_97663048_97664339_97664444_97666762_97666878_97668845_97668975_97669592_97669707_97671085
transcript_140358.known	chr9	+	300	2	FSM	ENSG00000136937.13	ENST00000491445.1	300	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAACATACTGTTTTC	NA	False	NA	8	True	AATAAA	-44	NA	97672710	97673740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97672782_97673511
transcript_140360.known	chr9	-	1400	6	FSM	ENSG00000136936.11	ENST00000375128.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	3.13687742827162	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-17	True	NA	-1	True	AATAAA	-22	NA	97697340	97674908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_140361.nic	chr9	-	1361	6	NIC	ENSG00000136936.11	novel	1400	6	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	31.5556651015313	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	NA	False	NA	-1	True	AATAAA	-22	NA	97697404	97674908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697223
transcript_140366.known	chr9	-	429	4	FSM	ENSG00000136936.11	ENST00000496104.1	429	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	34.8934887272046	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAACAGAAGAAAT	75	False	NA	NA	False	NA	NA	NA	97697295	97684960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97685041_97687095_97687262_97693648_97693760_97697223
transcript_14037.known	chr1	-	2966	13	FSM	ENSG00000272645.4	ENST00000634905.2	2975	13	9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.9712867835111	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTAATTTGTTTATC	-11	True	NA	-91	True	NA	NA	NA	223992594	223951478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_223952292_223952384_223952443_223954476_223954668_223955418_223955538_223961063_223961233_223962076_223962274_223973981_223974047_223976879_223977116_223982757_223983286_223984381_223984441_223986574_223986641_223988044_223988155_223992239
transcript_140372.known	chr9	-	1577	5	FSM	ENSG00000136932.15	ENST00000375119.8	1577	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.41774882649672	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	12	True	NA	42	True	ATTAAA	-15	NA	97922500	97904488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97904993_97909959_97910617_97913400_97913559_97916163_97916339_97922417
transcript_140374.nic	chr9	-	1461	4	NIC	ENSG00000136932.15	novel	1577	5	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	4.10960933531265	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	8073	False	NA	42	True	ATTAAA	-15	NA	97922559	97904488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_97904993_97909959_97910617_97913400_97913559_97922417
transcript_140375.nic	chr9	-	1398	4	NIC	ENSG00000136932.15	novel	1577	5	NA	NA	-59	-18	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	4.10960933531265	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATACAGAGAAATCAC	8073	False	NA	-21	True	AATAAA	-15	NA	97922559	97904551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_97904993_97909959_97910617_97913400_97913559_97922417
transcript_140376.known	chr9	-	552	3	FSM	ENSG00000136932.15	ENST00000455506.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATGTTAGCATTGAA	8145	False	NA	NA	False	AATACA	-7	NA	97922487	97913251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97913559_97916163_97916339_97922417
transcript_140383.known	chr9	+	1483	7	FSM	ENSG00000136938.9	ENST00000339399.5	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	33.7412540108133	2457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTATGCTTACAT	-9	True	NA	7	True	AATAAA	-19	NA	97983340	98015943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97983610_97994630_97994781_97998555_97998679_98004963_98005154_98011270_98011390_98012420_98012473_98015363
transcript_140387.known	chr9	+	1179	6	FSM	ENSG00000095380.11	ENST00000210444.6	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_3	60.068627418978	4721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	9	True	NA	20	True	AATAAA	-16	NA	98056731	98083077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_98056941_98060781_98060998_98076917_98077018_98078192_98078348_98080815_98081083_98082845
transcript_140388.known	chr9	-	5456	12	FSM	ENSG00000106789.13	ENST00000375077.5	5456	12	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_11	20.6020940923911	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTTCCTTTTCTTGAT	12	True	NA	-2	True	AATAAA	-22	NA	98192637	98120974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_140393.known	chr9	-	3265	13	FSM	ENSG00000095383.20	ENST00000465784.7	3265	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	7.26674311886388	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCAGTTACCAGTTG	-6	True	NA	3	True	TATAAA	-45	NA	98255649	98199010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
transcript_140395.nnic	chr9	+	1788	3	Antisense	novelGene_ENSG00000136928.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTCAGGAACTGCTTG	NA	False	NA	1	True	AATAAA	-14	NA	98268861	98321004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_+_98269160_98319183_98319407_98319737
transcript_140400.nnic	chr9	-	814	3	NIC	ENSG00000165138.18	novel	7190	15	NA	NA	226	0	combination_of_known_splicesites	FALSE	canonical	3	412	junction_2	155	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTCGTCTTGTGATGA	215	False	NA	-7	True	AGTAAA	-16	NA	98796313	98783569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_98784158_98784831_98784877_98796132
transcript_140401.known	chr9	-	1938	2	FSM	ENSG00000285706.1	ENST00000647710.1	1938	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCATGGTGAATTGACT	NA	False	NA	NA	False	AATAAA	-7	NA	98807564	98798465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98799610_98806770
transcript_140402.known	chr9	+	2764	10	FSM	ENSG00000119514.7	ENST00000375011.4	2764	10	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_5	21.9179164550008	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGATCTTTTTGTACTG	-7	True	NA	38	True	ATTAAA	-19	NA	98807669	98850081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_98808070_98823255_98823426_98826751_98826942_98831771_98831958_98835248_98835367_98836971_98837149_98840001_98840134_98844095_98844210_98845976_98846124_98848951
transcript_140403.known	chr9	+	772	2	FSM	ENSG00000119514.7	ENST00000470473.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGCTTTTTGGTT	-15	True	NA	NA	False	NA	NA	NA	98848771	98849634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_98848861_98848951
transcript_140404.known	chr9	-	2808	2	FSM	ENSG00000119523.10	ENST00000476832.2	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTTGGCATTGTGAAA	-14	True	NA	-1	True	ATTAAA	-18	NA	99221942	99216424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_99218837_99221546
transcript_140405.known	chr9	-	1627	2	FSM	ENSG00000119523.10	ENST00000319033.7	1627	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAAAGAAACAGTATTA	841	False	NA	42	True	AATAAA	-12	NA	99221140	99217371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_99218837_99220978
transcript_140406.known	chr9	+	587	4	FSM	ENSG00000106803.10	ENST00000498603.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1633.95661577112	2198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	NA	False	NA	27	True	AATAAA	-19	NA	99222063	99230615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99222172_99222545_99222644_99227898_99228001_99230336
transcript_140411.known	chr9	+	564	4	FSM	ENSG00000106803.10	ENST00000223641.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	3374	junction_1	105.963306017801	36438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	7	True	NA	27	True	AATAAA	-19	NA	99222281	99230615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99222367_99222545_99222644_99227898_99228001_99230336
transcript_140416.known	chr9	-	1652	3	FSM	ENSG00000255145.3	ENST00000529965.3	1652	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGCCCAGGTTGGAGT	519	False	NA	NA	False	NA	NA	NA	99906601	99885217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_99886696_99894879_99895006_99906553
transcript_140422.known	chr9	+	6885	8	FSM	ENSG00000136874.11	ENST00000259400.11	6885	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	15.3197218496623	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTGAAGGCCTGTG	-12	True	NA	18	True	AATAAA	-18	NA	99906653	99974534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
transcript_14043.nic	chr1	+	1828	4	NIC	ENSG00000185495.10	novel	624	4	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	6.12825877028341	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTGGACTCTCTT	NA	False	NA	13	True	AATAAA	-22	NA	223992748	224010612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_223993048_224002521_224002623_224003519_224003655_224009319
transcript_140431.known	chr9	+	941	7	FSM	ENSG00000136874.11	ENST00000524405.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	27.7653861249338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGGAACACAAGTATATC	30	False	NA	NA	False	NA	NA	NA	99906695	99968748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99960104_99960156_99967652_99967740_99968433
transcript_140434.nnic	chr9	+	1097	3	NNC	ENSG00000136874.11	novel	611	3	NA	NA	-42	-6151	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	18	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAATTTTTTTTTTACA	NA	False	NA	NA	False	AATAAA	-17	NA	99906611	99923018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_99906707_99915177_99915363_99922201
transcript_140435.nnic	chr9	+	1399	3	NNC	ENSG00000136874.11	novel	542	2	NA	NA	6	-6151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAATTTTTTTTTTACA	36	False	NA	NA	False	AATAAA	-17	NA	99906701	99923018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_99907099_99915177_99915363_99922201
transcript_140437.known	chr9	+	542	2	FSM	ENSG00000136874.11	ENST00000526607.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCTGTTTCATTTACTA	76	False	NA	NA	False	GATAAA	-11	NA	99906741	99915362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99907099_99915177
transcript_140444.known	chr9	-	4808	12	FSM	ENSG00000023318.9	ENST00000262455.7	4808	12	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_10	41.4804544234216	903	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAGTAAAAAAAAAAAA	5	True	NA	NA	False	AATAAA	-21	NA	100099000	99979184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_99982714_99984966_99985070_100006505_100006648_100007577_100007690_100016321_100016439_100018255_100018314_100020615_100020732_100022041_100022227_100052416_100052533_100057819_100057860_100060099_100060173_100098783
transcript_140445.known	chr9	+	2968	18	FSM	ENSG00000119509.13	ENST00000262456.6	2968	18	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	10.2757819897918	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATTCACCTAAAAATGTG	3	True	NA	-29	True	NA	NA	NA	100099274	100300788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100292437_100292946_100293044_100296916_100297147_100297935_100298011_100300567
transcript_140448.known	chr9	+	4897	17	FSM	ENSG00000119509.13	ENST00000262457.7	4897	17	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	8.6421930087218	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTATGGCCTCTTCAAT	-29	True	NA	13	True	AATAAA	-16	NA	100099242	100302175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100226061_100226236_100229659_100229828_100240059_100240241_100242569_100242680_100246615_100246788_100252282_100252439_100252906_100253137_100264821_100264929_100272863_100273077_100284319_100284604_100292325_100293044_100296916_100297147_100297935_100298011_100300567
transcript_140459.known	chr9	+	1654	4	FSM	ENSG00000119509.13	ENST00000374921.3	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	16.4181471413663	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAGTGTTTTATAAAA	16	True	NA	NA	False	ATTAAA	-33	NA	100099287	100130903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100129675
transcript_140465.nic	chr9	+	598	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-69	4251	-24	-4251	5prime_fragment	FALSE	canonical	3	43	junction_1	5.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCATAGGTTTTATATA	-1	True	NA	NA	False	AATAAA	-16	NA	100099218	100126652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_140466.nic	chr9	+	820	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-69	4029	-24	-4029	5prime_fragment	FALSE	canonical	3	43	junction_1	5.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTCAAAGATATTAATAGT	-1	True	NA	NA	False	AATAAA	-14	NA	100099218	100126874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_140467.nic	chr9	+	992	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-69	3857	-24	-3857	5prime_fragment	FALSE	canonical	3	43	junction_1	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGGGCATGGTGGCGC	-1	True	NA	NA	False	ATTAAA	-4	NA	100099218	100127046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_140468.known	chr9	+	862	2	FSM	ENSG00000119509.13	ENST00000480309.1	862	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGCCTCTGCTTTCTTA	0	True	NA	NA	False	NA	NA	NA	100099271	100102017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100099417_100101300
transcript_14047.nnic	chr1	+	414	2	NNC	ENSG00000185495.10	novel	487	3	NA	NA	2	-7649	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTGGTATTTTTAATT	NA	False	NA	NA	False	ATTAAA	-17	NA	223992744	223996005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_223993048_223995894
transcript_140472.nnic	chr9	-	2843	16	NNC	ENSG00000136891.14	novel	3077	15	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_13	163.596441145752	529	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	NA	False	NA	-14	True	ATTAAA	-18	NA	100352996	100302083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100346879_100347166_100347407_100349183_100349373_100352771
transcript_140479.known	chr9	-	3077	15	FSM	ENSG00000136891.14	ENST00000374902.9	3077	15	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_12	64.6649133642671	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	-14	True	NA	-14	True	ATTAAA	-18	NA	100352942	100302083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_14048.known	chr1	+	5427	5	FSM	ENSG00000143756.12	ENST00000366862.10	5427	5	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_1	3.80788655293195	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTTCTTTGTATT	1	True	NA	10	True	AATAAA	-17	NA	224114110	224162047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224114397_224130471_224130582_224134073_224134213_224153141_224153338_224157351
transcript_14049.known	chr1	+	628	3	FSM	ENSG00000143756.12	ENST00000483773.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCATTTGTATGATCTTT	61	False	NA	NA	False	TATAAA	-4	NA	224114170	224134365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224114397_224130471_224130582_224134073
transcript_140490.nnic	chr9	-	2756	13	NIC	ENSG00000136891.14	novel	3077	15	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_8	183.112651271166	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	NA	False	NA	-14	True	ATTAAA	-18	NA	100352996	100302083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_140502.known	chr9	+	1880	3	FSM	ENSG00000066697.15	ENST00000395067.7	1880	3	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	80.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTCACACTGTGTA	-6	True	NA	NA	False	ATTAAA	-21	NA	100427142	100451734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100427394_100441905_100442357_100450556
transcript_140505.known	chr9	+	710	3	FSM	ENSG00000066697.15	ENST00000374886.7	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	176	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACAGGAGCAAAACCTC	42	False	NA	NA	False	AATAAA	-1	NA	100427436	100450681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100427571_100441905_100442357_100450556
transcript_140506.known	chr9	+	1755	3	FSM	ENSG00000066697.15	ENST00000613183.1	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	181.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTG	2119	False	NA	NA	False	AAGAAA	-42	NA	100429513	100451711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100429663_100441905_100442357_100450556
transcript_140508.known	chr9	+	2575	10	FSM	ENSG00000241697.5	ENST00000374879.5	2575	10	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_7	59.7087581722241	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTCTGTTTTGGTGTGT	-3	True	NA	23	True	AATATA	-15	NA	100473148	100577636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100473741_100498764_100498875_100509004_100509135_100513306_100513334_100516674_100516772_100547743_100547893_100550094_100550161_100561396_100561521_100572517_100572677_100576515
transcript_140509.known	chr9	+	3098	2	FSM	ENSG00000170681.7	ENST00000307584.6	3098	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATTACAACATTTGATG	0	True	NA	NA	False	AATAAA	-17	NA	100578078	100588389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100578552_100585764
transcript_140510.nnic	chr9	+	1051	5	NNC	ENSG00000148123.15	novel	2477	8	NA	NA	-33	2679	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.77263412660235	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATCTTGTTTTGCAATA	-2	True	NA	NA	False	ATTAAA	-14	NA	101028693	101288839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_101029103_101185449_101185558_101269879_101270069_101286103_101286237_101288627
transcript_140511.known	chr9	-	3336	2	FSM	ENSG00000136897.8	ENST00000374865.5	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	563	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTGTCATTTTTCTGA	-9	True	NA	-2	True	AATAAA	-16	NA	101398618	101387632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_101390851_101398500
transcript_140514.known	chr9	+	3115	4	FSM	ENSG00000136870.11	ENST00000259395.4	3115	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.31816613336672	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	145	False	NA	26	True	ATTAAA	-23	NA	101399027	101410660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101399190_101399394_101399531_101399925_101400011_101407928
transcript_140518.known	chr9	+	3134	3	FSM	ENSG00000136870.11	ENST00000374861.7	3134	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	-10	True	NA	26	True	ATTAAA	-23	NA	101398872	101410660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101399190_101399925_101400011_101407928
transcript_140520.known	chr9	+	3192	3	FSM	ENSG00000136870.11	ENST00000339664.7	3192	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTGTAAGAGTTGTTA	-32	True	NA	20	True	ATTAAA	-17	NA	101398850	101410654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101399190_101399883_101400011_101407928
transcript_140522.known	chr9	-	4225	2	FSM	ENSG00000165152.9	ENST00000374848.8	4225	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGAAGACTTTTATC	1	True	NA	-16	True	AATAAA	-21	NA	101487173	101473169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_101477170_101486948
transcript_140526.known	chr9	+	3938	20	FSM	ENSG00000155827.12	ENST00000389120.8	3938	20	0	0	0	0	multi-exon	FALSE	canonical	2	109	junction_4	30.8889531033785	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATGGTTTTTCT	-7	True	NA	18	True	ATTAAA	-18	NA	101533852	101563344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693_101554844_101557383_101557597_101560800_101560927_101561089_101561231_101561909_101562012_101562245
transcript_140530.known	chr9	+	5928	25	FSM	ENSG00000136824.19	ENST00000374793.8	5928	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	46.5116286236273	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGAGCAGTATGTAC	-7	True	NA	9	True	AATAAA	-14	NA	104094308	104141419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_140537.nic	chr9	+	2765	18	ISM	ENSG00000136824.19	ENST00000374793.8	5928	25	-231	16461	-182	-14693	5prime_fragment	FALSE	canonical	3	105	junction_1	41.1082628355468	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGAAGAAAAATATGAAGT	NA	False	NA	NA	False	ACTAAA	-16	NA	104094077	104124958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911
transcript_14055.known	chr1	+	957	3	FSM	ENSG00000143753.13	ENST00000415210.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACAACCTCCCTCAC	NA	False	NA	NA	False	NA	NA	NA	224175755	224192353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224175948_224189576_224190320_224192331
transcript_14058.known	chr1	+	2032	3	FSM	ENSG00000143753.13	ENST00000323699.9	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	25.5	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTCAGGTGTGTTG	16	True	NA	19	True	AATAAA	-28	NA	224183239	224193441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224183419_224189576_224190320_224192331
transcript_140599.known	chr9	+	4266	25	FSM	ENSG00000136824.19	ENST00000374787.7	4266	25	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	58.7024038879348	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCATCAGTGTTTAA	-35	True	NA	12	True	ATTAAA	-16	NA	104094563	104139651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104094839_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_1406.known	chr1	+	625	4	FSM	ENSG00000162444.12	ENST00000294435.8	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	2.35702260395516	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTTTTTCCTTTCCG	-2	True	NA	13	True	AATAAA	-15	NA	9997227	10016021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9997332_10007569_10007749_10008172_10008275_10015781
transcript_140602.known	chr9	+	1636	6	FSM	ENSG00000136783.10	ENST00000374767.5	1636	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	15.0519101777814	740	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCTTTTTGTTGA	-2	True	NA	7	True	AATAAA	-14	NA	104747682	104760120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084_104759172_104759261
transcript_140610.known	chr9	+	735	6	FSM	ENSG00000165028.12	ENST00000461177.1	735	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.49666295470958	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTCTCGCTTTTATTT	15	True	NA	NA	False	NA	NA	NA	104764194	104773146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104764301_104768862_104769022_104770848_104770999_104771233_104771317_104772821_104772909_104772996
transcript_140626.nnic	chr9	-	1433	4	NNC	ENSG00000286536.1	novel	2813	8	NA	NA	-5967	-172451	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6.84754619472471	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCTAGTTAGTTCCCA	403	False	NA	NA	False	NA	NA	NA	105245188	105198382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_105199359_105226091_105226322_105226596_105226654_105245018
transcript_140628.nnic	chr9	-	1205	3	NNC	ENSG00000286536.1	novel	2813	8	NA	NA	-5967	-172449	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	0.5	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAGTTAGTTCCCAAC	403	False	NA	NA	False	NA	NA	NA	105245188	105198380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_105199359_105226596_105226654_105245018
transcript_140632.known	chr9	+	10482	16	FSM	ENSG00000070214.16	ENST00000374720.8	10482	16	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_12	54.7795582311504	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATTGTCTACTGTGTTG	20	True	NA	9	True	AATAAA	-21	NA	105244650	105397346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105244905_105299219_105299310_105309723_105309867_105335562_105335700_105348357_105348452_105356211_105356382_105358343_105358434_105361190_105361331_105362820_105363008_105364554_105364721_105365482_105365640_105366345_105366430_105374597_105374736_105383122_105383360_105385421_105385503_105389032
transcript_140634.nic	chr9	+	1038	8	NIC	ENSG00000106701.13	novel	1906	11	NA	NA	19	6436	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	6.97809985246846	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAGGAAAAGAGAACAAG	-13	True	NA	NA	False	AGTAAA	-2	NA	105448063	105512911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_105448236_105464235_105464332_105468192_105468325_105471903_105472006_105484380_105484503_105506398_105506609_105508616_105508716_105512806
transcript_140637.known	chr9	+	1836	4	FSM	ENSG00000106701.13	ENST00000469022.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1.4142135623731	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCACTATATCACTT	-32	True	NA	NA	False	AAAACA	-6	NA	105448044	105473320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105448236_105464235_105464332_105468192_105468325_105471903
transcript_140642.known	chr9	+	7364	10	FSM	ENSG00000106692.15	ENST00000223528.6	7364	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	11.3311544746506	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTGTATTTATTTTT	-8	True	NA	4	True	AATAAA	-19	NA	105558129	105641118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105558166_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933_105620062_105635050
transcript_140649.nnic	chr9	+	712	2	Genic_Genomic	ENSG00000186051.7	novel	668	1	NA	NA	-6218	0	multi-exon	FALSE	canonical	3	37	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTATACTCAATGT	-21	True	NA	NA	False	AATAAA	-20	NA	105656238	105663124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_+_105656313_105662486
transcript_140650.known	chr9	+	668	1	FSM	ENSG00000186051.7	ENST00000334077.6	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTATACTCAATGT	6197	False	NA	NA	False	AATAAA	-20	NA	105662456	105663124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105662500_105663100
transcript_140656.known	chr9	+	3545	6	FSM	ENSG00000095209.12	ENST00000374692.8	3545	6	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_5	18.4455956802701	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTGGTAATATTCATT	-3	True	NA	19	True	AATAAA	-34	NA	105694540	105776629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105748072_105748191_105773864
transcript_140661.nnic	chr9	+	1069	3	NNC	ENSG00000148143.13	novel	551	4	NA	NA	-3042	-5714	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCAACTTCAGGGGCTCC	NA	False	NA	NA	False	NA	NA	NA	106860123	106924861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_106860214_106923353_106923604_106924132
transcript_140662.nic	chr9	+	2086	3	ISM	ENSG00000148143.13	ENST00000472574.1	551	4	-686	5483	-686	-5483	5prime_fragment	FALSE	canonical	3	22	junction_1	7.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGACAGTGAGAATGGT	-5	True	NA	NA	False	NA	NA	NA	106862479	106925092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_106863356_106923353_106923604_106924132
transcript_140663.known	chr9	+	10345	13	FSM	ENSG00000148143.13	ENST00000277225.10	10345	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	7.99826370046789	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGCATCTGTTGTAA	17	True	NA	9	True	AATAAA	-19	NA	106863165	107013634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_106863356_106923353_106923604_106924132_106929760_106930524_106930690_106932445_106932550_106935502_106935622_106938915_106939108_106972004_106972273_106974136_106974274_106984185_106984410_107003293_107003427_107009544_107009669_107010822
transcript_140667.known	chr9	+	318	1	FSM	ENSG00000169253.3	ENST00000306634.3	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	474	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTCCCCTGCCCTCT	34	False	NA	NA	False	AAGAAA	-7	NA	108626832	108627150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_108626800_108627200
transcript_140668.known	chr9	-	5913	37	FSM	ENSG00000070061.16	ENST00000374647.10	5913	37	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_36	34.961387431152	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTTTCCTGGAC	-24	True	NA	NA	False	AGTAAA	-16	NA	108934124	108867516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_108869183_108874894_108874971_108877994_108878150_108878622_108878751_108879445_108879558_108880051_108880166_108881704_108881766_108882124_108882188_108889331_108889394_108891202_108891405_108892985_108893084_108893942_108894067_108896495_108896645_108896952_108897039_108897147_108897286_108898501_108898582_108898670_108898750_108899821_108899896_108900259_108900376_108901424_108901531_108901627_108901682_108902838_108902943_108903562_108903670_108906302_108906486_108908304_108908405_108911009_108911181_108912263_108912495_108916203_108916298_108917546_108917671_108918810_108918902_108919252_108919350_108922841_108922928_108926522_108926604_108927371_108927454_108929768_108929922_108930996_108931202_108933863
transcript_14067.known	chr1	+	1345	4	FSM	ENSG00000143753.13	ENST00000391877.3	1345	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	140.847435191416	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTATTAGTATTTGTT	-2	True	NA	12	True	AATAAA	-13	NA	224183265	224193157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224183419_224189576_224190320_224192331_224192519_224192895
transcript_140675.known	chr9	-	2522	19	FSM	ENSG00000119326.15	ENST00000374595.8	2522	19	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	178.351781669518	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGTGTGATTTTTAAAA	-1	True	NA	0	True	AATAAA	-26	NA	109013522	108942568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_108942872_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_140678.known	chr9	-	2454	19	FSM	ENSG00000119326.15	ENST00000325551.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_11	65.9140854951858	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTAATTGTAGTGTGAT	22	True	NA	-8	True	AATAAA	-18	NA	109013499	108942576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_108942835_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_14068.known	chr1	-	437	2	FSM	ENSG00000232628.7	ENST00000453760.6	462	2	25	0	25	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCATCATTGTGCTTTG	18	False	NA	NA	False	ATTAAA	-17	NA	224210412	224208746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224209012_224210240
transcript_140685.known	chr9	+	1901	6	FSM	ENSG00000119328.12	ENST00000322940.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	11.6550418274668	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	-46	True	NA	NA	False	AATAAA	-19	NA	108934399	108940954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_108934566_108935637_108935690_108936307_108936438_108939195_108939273_108939384_108939455_108939548
transcript_140687.nnic	chr9	+	1785	5	NIC	ENSG00000119328.12	novel	1901	6	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_2	78.8289287000654	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	-60	True	NA	NA	False	AATAAA	-19	NA	108934385	108940954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_108934566_108935637_108935690_108939195_108939273_108939384_108939455_108939548
transcript_140690.known	chr9	+	389	5	FSM	ENSG00000119328.12	ENST00000445175.1	389	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.3441424204231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAGAAGTCATGGTGA	94	False	NA	NA	False	AGTAAA	-33	NA	108934539	108939634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_108934566_108936307_108936438_108939195_108939273_108939384_108939455_108939548
transcript_140691.known	chr9	+	499	4	FSM	ENSG00000119328.12	ENST00000374624.7	499	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.538505987976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCCTTTTTCTCTT	41	True	NA	NA	False	AATAAA	-19	NA	108934486	108950744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_108934566_108935637_108935690_108936307_108936438_108950506
transcript_140694.nnic	chr9	+	462	3	NIC	ENSG00000119328.12	novel	499	4	NA	NA	-14	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	107.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACCCTTTCTTTTCTCCTT	-60	True	NA	NA	False	AATAAA	-11	NA	108934385	108950736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_108934566_108935637_108935690_108950506
transcript_140696.known	chr9	-	7999	18	FSM	ENSG00000106771.13	ENST00000374586.8	7999	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	92.5459952978774	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTGTGTGTTGAAAAAC	-2	True	NA	2	True	AATAAA	-37	NA	109119947	109015134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_109020506_109033306_109033502_109036205_109036381_109038016_109038118_109050282_109050429_109050569_109050693_109057190_109057323_109060353_109060453_109064476_109064568_109073355_109073439_109080838_109080944_109085996_109086021_109087172_109087343_109090921_109091156_109093474_109093592_109106507_109106610_109108452_109108571_109119334
transcript_140698.known	chr9	-	4006	16	FSM	ENSG00000095203.15	ENST00000374557.4	4006	16	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	24.1765726823855	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGAGTGGTTTCAGT	44	True	NA	-4	True	AATAAA	-17	NA	109320964	109239730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_109241810_109243617_109243683_109247755_109247790_109251480_109251512_109253440_109253551_109255510_109255681_109255773_109255844_109256135_109256225_109256392_109256481_109258176_109258298_109263049_109263103_109264979_109265025_109267472_109267552_109268390_109268434_109279816_109279922_109320140
transcript_14070.known	chr1	-	3003	24	FSM	ENSG00000143748.18	ENST00000482491.5	3003	24	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	76.4299350493288	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAAAGTTACAGAGA	-27	True	NA	-4	True	AATAAA	-26	NA	224330189	224227336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_140704.known	chr9	+	6866	4	FSM	ENSG00000157654.19	ENST00000374525.5	6866	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	19.6015872373189	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	2	True	NA	NA	False	ATTAAA	-28	NA	110048695	110172512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_110048856_110136126_110138540_110156318_110156498_110168398
transcript_140706.known	chr9	-	478	1	FSM	ENSG00000228053.1	ENST00000418441.1	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGTGTTTAAAAAATAAAT	39	False	NA	NA	False	NA	NA	NA	110025358	110024880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_110024900_110025400
transcript_140712.known	chr9	-	737	5	FSM	ENSG00000136810.13	ENST00000374517.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	3	7787	junction_4	185.028376202138	18417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTGACAGAGAAAATAG	0	True	NA	NA	False	AATAAA	-22	NA	110256507	110243809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
transcript_140714.known	chr9	+	635	3	FSM	ENSG00000232896.1	ENST00000451108.1	635	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGTGTGGTGGTGG	13	False	NA	NA	False	AATACA	-5	NA	110599474	110605219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_110599529_110604417_110604489_110604709
transcript_140720.known	chr9	-	2806	23	FSM	ENSG00000136813.15	ENST00000602447.5	2806	23	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_22	80.076977428282	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTATATTGCTACCTGA	0	True	NA	NA	False	NA	NA	NA	111483679	111408570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111408673_111410040_111410214_111410979_111411143_111412013_111412149_111413894_111413987_111414428_111414652_111416271_111416353_111417882_111418007_111420016_111420121_111421920_111422044_111422133_111422201_111423198_111423249_111425417_111425497_111425742_111425829_111428041_111428162_111430546_111430629_111433232_111433373_111436939_111437109_111440371_111440522_111442305_111442425_111444377_111444495_111451424_111451556_111483503
transcript_140722.nic	chr9	-	578	2	ISM	ENSG00000136813.15	ENST00000602447.5	2806	23	117	42466	117	-8726	5prime_fragment	FALSE	canonical	3	67	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAGCAAAATAATTTTA	3	True	NA	NA	False	AATAAA	-6	NA	111483562	111451036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_111451556_111483503
transcript_140732.known	chr9	+	1239	6	FSM	ENSG00000173258.13	ENST00000355824.7	1239	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	11.2782977438973	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAAT	-5	True	NA	NA	False	NA	NA	NA	111525188	111539761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111539445
transcript_140734.known	chr9	+	14694	6	FSM	ENSG00000173258.13	ENST00000309235.6	14694	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	6.1773780845922	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCCGTTGTGCTATTT	-15	True	NA	NA	False	NA	NA	NA	111525178	111555417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111541656
transcript_140737.known	chr9	+	2433	6	FSM	ENSG00000173258.13	ENST00000358151.8	2433	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	11.9599331101808	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAAAAGGAAT	-35	True	NA	NA	False	NA	NA	NA	111525158	111577844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111576364
transcript_14074.known	chr1	-	2897	23	FSM	ENSG00000143748.18	ENST00000281701.11	2897	23	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_14	43.6341145253714	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACTATACAGAAAAGT	-10	True	NA	-12	True	AATAAA	-43	NA	224330172	224227344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_140745.known	chr9	+	800	2	FSM	ENSG00000173258.13	ENST00000374374.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTGTAGTTTTCTTG	22	True	NA	NA	False	AAAAAG	-9	NA	111525215	111528020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111525263_111527267
transcript_140747.known	chr9	-	1599	10	FSM	ENSG00000106853.20	ENST00000407693.7	1599	10	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_9	153.140297169896	3256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCATGCCTGTA	0	True	NA	-1	True	AATAAA	-34	NA	111599647	111562566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_140748.known	chr9	-	1223	10	FSM	ENSG00000106853.20	ENST00000309195.9	1223	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_9	292.361183689619	2929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATGGAGGATGGAAG	5	True	NA	-36	True	AATAAA	-22	NA	111599407	111562966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_140749.known	chr9	-	1941	11	FSM	ENSG00000106853.20	ENST00000466771.6	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	394.58073951981	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGCCGGGCGTGGTGGCT	NA	False	NA	-11	True	AATAAA	-24	NA	111599893	111562576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_140750.known	chr9	-	389	2	FSM	ENSG00000106853.20	ENST00000485319.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGTATTTGT	2451	False	NA	-27	True	NA	NA	NA	111597413	111592690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111592983_111597316
transcript_140751.nnic	chr9	-	757	2	NNC	ENSG00000204173.11	novel	1103	3	NA	NA	21	-17907	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGTGTGGTACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	111631268	111626920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_111627449_111631039
transcript_140765.known	chr9	+	1201	3	FSM	ENSG00000242616.4	ENST00000374293.5	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_2	121	5932	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTCTATGACAGCAA	14	True	NA	15	True	AATAAA	-17	NA	111661604	111670226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111661716_111666814_111666947_111669268
transcript_140766.known	chr9	+	3959	9	FSM	ENSG00000148154.10	ENST00000374279.4	3959	9	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_7	23.3127513391277	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGCAATAGTGTATTTT	0	True	NA	15	True	AATAAA	-20	NA	111896813	111935369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111897314_111914604_111914747_111922848_111922952_111924776_111924879_111926383_111926497_111929499_111929679_111931270_111931358_111932169_111932360_111932826
transcript_140769.known	chr9	-	4488	2	FSM	ENSG00000259953.2	ENST00000563434.1	4488	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAATGTGATGATATGATA	4302	False	NA	1	True	AATAAA	-21	NA	112037730	112032554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112035995_112036682
transcript_140770.known	chr9	-	7192	14	FSM	ENSG00000119314.16	ENST00000374257.6	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_12	52.1279717981333	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	8	True	NA	-2	True	AATAAA	-28	NA	112333619	112218434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112333469
transcript_140772.known	chr9	-	2755	13	FSM	ENSG00000119314.16	ENST00000343327.6	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	70.6768860535198	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTTTTCAATAAGTAA	3	True	NA	NA	False	TTTAAA	-21	NA	112333578	112222660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297831_112297917_112333469
transcript_14078.known	chr1	-	2832	22	FSM	ENSG00000143748.18	ENST00000391875.6	2832	22	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_21	30.3118336006885	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	-8	True	NA	-1	True	AATAAA	-29	NA	224330170	224227333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224330070
transcript_140789.known	chr9	-	368	4	FSM	ENSG00000119314.16	ENST00000450374.1	368	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	55.6796392070048	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATATCATTAGGTCTACC	13	True	NA	NA	False	NA	NA	NA	112333614	112275909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112276014_112297831_112297917_112330440_112330475_112333469
transcript_14079.known	chr1	-	2566	22	FSM	ENSG00000143748.18	ENST00000469075.5	2566	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_17	69.3380100463534	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTTTACTTTGA	24	True	NA	-36	True	AATAAA	-19	NA	224330138	224227368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_140791.nic	chr9	-	1171	3	NIC	ENSG00000119314.16	novel	3413	15	NA	NA	-19	777	combination_of_known_junctions	FALSE	canonical	3	72	junction_1	98.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGTATTGTCAAAAGACA	NA	False	NA	NA	False	AATAAA	-4	NA	112333683	112275132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_112276014_112297840_112297917_112333469
transcript_140792.nic	chr9	-	1173	3	ISM	ENSG00000119314.16	ENST00000374257.6	7192	14	-64	56705	-19	770	5prime_fragment	FALSE	canonical	3	126	junction_1	71.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGTATAGTATTGTCA	NA	False	NA	NA	False	AGTAAA	-24	NA	112333683	112275139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_112276014_112297831_112297917_112333469
transcript_140794.known	chr9	+	3174	11	FSM	ENSG00000119471.15	ENST00000398805.8	3174	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_7	12.1692234756372	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	6	True	NA	12	True	AATAAA	-18	NA	112380107	112472405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112408906_112409022_112416840_112416945_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_140805.known	chr9	+	2983	9	FSM	ENSG00000119471.15	ENST00000398803.1	2983	9	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	45.7902828119679	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	60	False	NA	12	True	AATAAA	-18	NA	112380079	112472405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_140815.nic	chr9	+	580	3	ISM	ENSG00000119471.15	ENST00000398803.1	2983	9	-143	66610	-143	-35975	5prime_fragment	FALSE	canonical	3	149	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGAGTTTTGAATT	NA	False	NA	NA	False	AATAAA	-28	NA	112379936	112405795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_112380181_112403994_112404159_112405623
transcript_140819.known	chr9	-	863	2	FSM	ENSG00000230185.6	ENST00000463223.1	863	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATTTGACCTATATGA	990	False	NA	NA	False	AATAAA	-25	NA	112486651	112484960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112485562_112486389
transcript_140828.known	chr9	-	964	6	FSM	ENSG00000148153.14	ENST00000497712.6	964	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	88.1784554185431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATCAGTATACCTTTTG	-5	True	NA	NA	False	NA	NA	NA	112718089	112687096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112701831_112701881_112716460_112716542_112717986
transcript_140830.known	chr9	-	4114	5	FSM	ENSG00000148153.14	ENST00000374242.9	4114	5	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	19.1898410623955	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTCCTGAACAAT	-33	True	NA	-14	True	AATAAA	-31	NA	112718117	112683925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717986
transcript_140835.known	chr9	-	879	5	FSM	ENSG00000148153.14	ENST00000481146.6	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	63.663176169588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATTGCATCCATATT	-2	True	NA	NA	False	AAGAAA	-35	NA	112718086	112687131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112694130_112694234_112701787_112701881_112716460_112716542_112717986
transcript_140837.known	chr9	-	874	4	FSM	ENSG00000148153.14	ENST00000374236.5	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	78.7922726047562	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	NA	False	NA	NA	False	AATGAA	-27	NA	112718149	112687116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112717986
transcript_140842.nic	chr9	-	1021	4	NIC	ENSG00000148153.14	novel	4114	5	NA	NA	-7	130	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	58.6590904198905	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTTATAAACATATG	NA	False	NA	-74	True	AATAAA	-18	NA	112718156	112686966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_112687634_112694130_112694234_112716460_112716542_112717986
transcript_140845.known	chr9	-	713	3	FSM	ENSG00000148153.14	ENST00000374234.1	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAATAGGCTTAAATCAA	-23	True	NA	NA	False	AAGAAA	-22	NA	112718107	112687144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112694130_112694234_112717986
transcript_140847.known	chr9	-	412	3	FSM	ENSG00000148153.14	ENST00000476599.2	412	3	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAATCTCGGCTCACTGC	-33	True	NA	NA	False	NA	NA	NA	112718117	112694033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112694234_112716460_112716542_112717986
transcript_140851.known	chr9	+	7700	9	FSM	ENSG00000148158.17	ENST00000374232.8	7700	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	10.0428768288773	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTCATGTCCTCATT	-31	True	NA	11	True	AATAAA	-23	NA	112750759	112874987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_112751158_112804775_112804968_112817704_112817816_112830724_112830884_112836213_112836410_112838497_112838698_112850858_112850946_112864246_112864400_112868783
transcript_140852.nnic	chr9	+	967	2	NNC	ENSG00000148158.17	novel	7700	9	NA	NA	-34949	-61313	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGCTTATTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	112803635	112805212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_112804166_112804775
transcript_140853.nnic	chr9	-	1226	6	NNC	ENSG00000228623.7	novel	2414	5	NA	NA	-12	-1153	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.7352059186349	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTCAGTACTGATGGAAT	NA	False	NA	-17	True	AATAAA	-15	NA	113012242	112998272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_112998281_112998330_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
transcript_140856.known	chr9	-	2414	5	FSM	ENSG00000228623.7	ENST00000638622.1	2414	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	6.97764286847643	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGGGAAAGCCTGCA	NA	False	NA	85	True	NA	NA	NA	113012227	112997119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
transcript_140857.nnic	chr9	-	1148	4	NIC	ENSG00000228623.7	novel	2414	5	NA	NA	8	-1171	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	25.1705295048705	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATGTAAAGCCATA	-20	True	NA	-35	True	AATAAA	-43	NA	113012219	112998290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_112999139_112999664_112999815_113001993_113002074_113012149
transcript_140858.nnic	chr9	-	1108	4	NIC	ENSG00000228623.7	novel	2414	5	NA	NA	-12	-1171	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	26.2339898266013	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATGTAAAGCCATA	NA	False	NA	-35	True	AATAAA	-43	NA	113012242	112998290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_112999139_113001993_113002074_113011140_113011228_113012149
transcript_140859.nic	chr9	-	414	4	FSM	ENSG00000228623.7	ENST00000685276.1	407	4	-12	5	-12	-5	multi-exon	FALSE	canonical	3	49	junction_3	7.25718035235908	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGTTTTCCTGAGTT	NA	False	NA	-16	True	AATAAA	-14	NA	113012242	112999660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112999815_113001993_113002074_113011140_113011228_113012149
transcript_140862.known	chr9	-	2451	4	FSM	ENSG00000136866.14	ENST00000555206.5	2451	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	7.1336448530109	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTTTTTAAAAGGGTT	31	False	NA	NA	False	NA	NA	NA	113056759	113042240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113044269_113049361_113049497_113049790_113049876_113056556
transcript_140863.known	chr9	-	6277	4	FSM	ENSG00000136866.14	ENST00000374227.8	6277	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	6.18241233033047	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCACATTAGGATTTTAA	-23	True	NA	NA	False	AATAAA	-19	NA	113056724	113038376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113044269_113049361_113049497_113049790_113049873_113056556
transcript_140865.known	chr9	-	1969	4	FSM	ENSG00000136866.14	ENST00000553380.1	1969	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	8.9938250421547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTGTTGAACCTTGG	13	True	NA	NA	False	GATAAA	-44	NA	113056688	113042693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113044269_113049361_113049497_113049790_113049918_113056556
transcript_140869.known	chr9	+	1723	4	FSM	ENSG00000136867.11	ENST00000259392.8	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.62466929133727	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTTCTGTTCTCCT	2	True	NA	17	True	ATTAAA	-44	NA	113151006	113164140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113151081_113157726_113157794_113161508_113161699_113162748
transcript_140870.nic	chr9	-	698	4	FSM	ENSG00000119321.10	ENST00000493847.2	2983	4	-109	2394	-14	623	multi-exon	FALSE	canonical	3	54	junction_3	7.40870359029762	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAAATTTGACCTTTGT	NA	False	NA	NA	False	AAAACA	-18	NA	113221412	113206303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113206579_113207211_113207297_113211476_113211593_113221190
transcript_140872.known	chr9	-	575	3	FSM	ENSG00000119321.10	ENST00000462889.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTAAGGGAATAGTAT	-15	True	NA	NA	False	AAGAAA	-43	NA	113221279	113206926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113207297_113211476_113211593_113221190
transcript_140873.known	chr9	+	771	2	FSM	ENSG00000136867.11	ENST00000490809.1	771	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAACTGTAGCCCAG	7	True	NA	NA	False	AAAACA	-45	NA	113150975	113152316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113151081_113151650
transcript_140874.known	chr9	+	4762	5	FSM	ENSG00000136868.11	ENST00000374212.5	4762	5	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_4	54.5825063550585	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTTTCTGCCCAGA	-21	True	NA	25	True	AATAAA	-22	NA	113221543	113264492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113221679_113256113_113256278_113257112_113257186_113258693_113258863_113260271
transcript_14088.nic	chr1	-	755	7	ISM	ENSG00000143748.18	ENST00000467882.5	1310	12	-57	15412	-5	-10	5prime_fragment	FALSE	canonical	3	234	junction_1	57.7946556544999	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAGAAGATCTTCAG	-32	False	NA	NA	False	AATAAA	-11	NA	224330194	224305093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_14089.nic	chr1	-	891	6	ISM	ENSG00000143748.18	ENST00000391875.6	2832	22	-234	77760	-215	-10	5prime_fragment	FALSE	canonical	3	141	junction_5	51.066231503803	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAGAAGATCTTCAG	NA	False	NA	NA	False	AATAAA	-11	NA	224330404	224305093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224330070
transcript_140899.nnic	chr9	-	863	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_3	510.248523325208	1136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-14	True	NA	-56	True	AATAAA	-33	NA	113275592	113266991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_113267440_113272426_113272549_113273328_113273411_113275381
transcript_14090.nic	chr1	-	686	6	NIC	ENSG00000143748.18	novel	1310	12	NA	NA	-4	-10	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	136.392081881611	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAAAGAAGATCTTCAG	-21	True	NA	NA	False	AATAAA	-11	NA	224330183	224305093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_224305167_224307990_224308264_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_140907.known	chr9	+	475	2	FSM	ENSG00000136868.11	ENST00000496650.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTTCTAGTTTCTG	22	True	NA	NA	False	AATAAA	-16	NA	113221586	113227660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113221679_113227277
transcript_140908.known	chr9	-	703	5	FSM	ENSG00000176386.9	ENST00000490408.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	502.091811823296	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTTTACTCAGAATTAT	29	False	NA	NA	False	AATAAA	-15	NA	113275549	113255834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113256044_113256454_113256549_113272426_113272549_113273328_113273439_113275381
transcript_140909.known	chr9	-	871	4	FSM	ENSG00000176386.9	ENST00000374206.4	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_3	167.453476125958	8691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	6	True	NA	-56	True	AATAAA	-33	NA	113275572	113266991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113267440_113272426_113272549_113273328_113273439_113275381
transcript_14091.known	chr1	-	577	7	FSM	ENSG00000143748.18	ENST00000461546.2	577	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	150.965135783803	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCAAAGAGAAACCACCTC	-17	True	NA	NA	False	NA	NA	NA	224330179	224308182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224308264_224311799_224311858_224313049_224313152_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_140913.known	chr9	+	2897	14	FSM	ENSG00000136875.13	ENST00000374198.5	2897	14	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	24.0352305520939	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGTCCATAGAGGTC	-13	True	NA	54	True	TATAAA	-38	NA	113275657	113292905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113275771_113276547_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
transcript_14092.known	chr1	-	692	5	FSM	ENSG00000143748.18	ENST00000489194.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.977717608773	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAAGTTACAGAGATCT	7320	False	NA	-1	True	AATAAA	-29	NA	224268133	224227333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224227671_224231225_224231297_224236505_224236583_224250211_224250319_224268033
transcript_140928.nic	chr9	+	556	4	ISM	ENSG00000136875.13	ENST00000374198.5	2897	14	-24	10206	-8	-477	5prime_fragment	FALSE	canonical	3	255	junction_1	34.5350063944784	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGATGAGAAGTCTAAAA	NA	False	NA	NA	False	AAAAAG	-9	NA	113275633	113282699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_113275771_113276547_113276726_113278944_113279132_113282645
transcript_140929.known	chr9	-	849	2	FSM	ENSG00000165188.14	ENST00000416588.2	849	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACGAAAAGCTTGAA	4305	False	NA	NA	False	TTTAAA	-8	NA	113298865	113297442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113298222_113298795
transcript_140930.known	chr9	-	534	2	FSM	ENSG00000165188.14	ENST00000443976.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTTA	NA	False	NA	NA	False	AGTAAA	-26	NA	113303376	113302100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113302314_113303055
transcript_140932.known	chr9	-	4871	11	FSM	ENSG00000148225.16	ENST00000374193.9	4871	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1.51327459504216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTGATGTCAAATT	20	False	NA	0	True	AATAAA	-20	NA	113340275	113313221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113316910_113318474_113318638_113320356_113320499_113321510_113321579_113322810_113322912_113323010_113323156_113328880_113328956_113330983_113331117_113331906_113332051_113336287_113336441_113340216
transcript_140935.nic	chr9	-	1860	2	ISM	ENSG00000148225.16	ENST00000465205.2	2255	10	-97	19032	-53	-13194	5prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGCCTGATG	NA	False	NA	NA	False	AATACA	-13	NA	113340351	113334715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_113336441_113340216
transcript_140937.known	chr9	+	2328	6	FSM	ENSG00000119411.11	ENST00000374183.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	16.3413585726524	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGATTTATTCCATGTT	-11	True	NA	15	True	ATTAAA	-14	NA	113349540	113371222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258_113368384_113369615
transcript_140939.known	chr9	-	913	3	FSM	ENSG00000119431.10	ENST00000485934.1	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	25	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGACCTCCGAGGCTG	60	False	NA	NA	False	NA	NA	NA	113376925	113373887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113374530_113375452_113375527_113376728
transcript_140941.known	chr9	-	1481	3	FSM	ENSG00000119431.10	ENST00000374180.4	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	27	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCCTAGCCTCTGCCC	-1	True	NA	-9	True	AATAAA	-37	NA	113376986	113373421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113374530_113375452_113375568_113376728
transcript_140942.known	chr9	-	3129	12	FSM	ENSG00000148218.16	ENST00000409155.8	3129	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	16.856712619327	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTGAATGTCTTGT	-2	True	NA	-10	True	AATAAA	-43	NA	113401284	113386311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_140943.known	chr9	-	3247	12	FSM	ENSG00000148218.16	ENST00000482847.5	3247	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	35.4230629453433	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTTCTACTGAAT	9431	False	NA	-17	True	AATAAA	-36	NA	113401243	113386318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392336_113393446_113393635_113401211
transcript_140951.known	chr9	-	547	2	FSM	ENSG00000148218.16	ENST00000494848.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTAAAGTGCTATGTAC	-2	True	NA	NA	False	NA	NA	NA	113401284	113393160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113393635_113401211
transcript_140956.known	chr9	-	2194	5	FSM	ENSG00000148229.13	ENST00000374171.5	2194	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	173.691357010071	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-1	True	NA	-16	True	AATAAA	-16	NA	113410675	113407234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227_113410409_113410616
transcript_140959.known	chr9	-	455	3	FSM	ENSG00000148229.13	ENST00000475080.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAGAAGAAGGACAAAG	12	True	NA	-13	True	NA	NA	NA	113410350	113408943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113408984_113409609_113409729_113410054
transcript_140962.nic	chr9	+	1552	8	ISM	ENSG00000138835.22	ENST00000317613.10	2542	18	-66	43155	-63	3096	5prime_fragment	FALSE	canonical	3	10	junction_5	4.18939379960434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGACCGGGCAC	NA	False	NA	NA	False	NA	NA	NA	113463665	113498934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137_113484233_113485624_113485694_113495785_113495847_113497313_113497405_113498024
transcript_140966.nic	chr9	+	1210	2	ISM	ENSG00000138835.22	ENST00000317613.10	2542	18	-66	61605	-63	-5207	5prime_fragment	FALSE	canonical	3	19	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATTCCAAAAATAGCG	NA	False	NA	NA	False	AAAAAG	-6	NA	113463665	113480484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_113463882_113479490
transcript_140967.known	chr9	+	1503	5	FSM	ENSG00000138835.22	ENST00000620489.1	1503	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	10.7325439668328	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	-13	True	NA	11	True	AATAAA	-18	NA	113594128	113597729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113594339_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_140969.known	chr9	+	9289	14	FSM	ENSG00000157657.15	ENST00000615615.4	9289	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	7.47777772893215	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGCAGCGTATGGTGTT	NA	False	NA	12	True	AATAAA	-13	NA	113876281	114056591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113876414_113969116_113969161_113988320_113988581_114001995_114002074_114002623_114002663_114007349_114007440_114008343_114008380_114008476_114008555_114016694_114016785_114028732_114028973_114032647_114032729_114036299_114036378_114047892_114047995_114048650
transcript_140971.known	chr9	-	1262	10	FSM	ENSG00000106927.12	ENST00000265132.8	1262	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_4	2.11403306560449	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCTCATTGTTCA	-2	True	NA	3	True	AATAAA	-24	NA	114078300	114060126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_114060271_114060924_114061099_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
transcript_140977.nnic	chr9	+	814	7	NNC	ENSG00000228278.5	novel	759	6	NA	NA	-2633	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.98142396999972	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGCTGTTAGTCATTTG	2117	False	NA	NA	False	AATAAA	-19	NA	114327235	114333251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_114327352_114329929_114330019_114330433_114330577_114330791_114330863_114331566_114331675_114331825_114331930_114333068
transcript_140978.nnic	chr9	+	759	6	NNC	ENSG00000228278.5	novel	759	6	NA	NA	-2667	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	1.32664991614216	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGCTGTTAGTCATTTG	2083	False	NA	NA	False	AATAAA	-19	NA	114327201	114333251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_114327352_114330433_114330577_114330791_114330863_114331566_114331675_114331825_114331930_114333068
transcript_140987.known	chr9	+	1385	3	FSM	ENSG00000136888.8	ENST00000678234.1	1385	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	1381.5	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCACACATATCACATA	-19	True	NA	-50	True	NA	NA	NA	114587761	114598496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114588119_114592551_114592653_114597569
transcript_140990.known	chr9	+	978	2	FSM	ENSG00000136888.8	ENST00000677452.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATTCTTTTTTTTTTCC	-29	True	NA	24	True	AGTAAA	-20	NA	114587751	114598378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114587921_114597569
transcript_140991.known	chr9	+	1563	3	FSM	ENSG00000136888.8	ENST00000374050.4	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_1	63.5	10099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTCAGGATTTTATTT	-12	True	NA	21	True	AATACA	-32	NA	114587768	114598879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114587921_114592551_114592653_114597569
transcript_141010.known	chr9	-	1757	9	FSM	ENSG00000148219.18	ENST00000341734.8	1757	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.079529376955	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	3	True	NA	-6	True	ATTAAA	-18	NA	116687234	116425227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_116425627_116425875_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_141013.nic	chr9	-	2042	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-36	0	intron_retention	FALSE	canonical	3	33	junction_7	11.246768243294	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-33	True	NA	-6	True	ATTAAA	-18	NA	116687270	116425227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_141015.nic	chr9	-	1665	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-36	-15	intron_retention	FALSE	canonical	3	33	junction_7	11.246768243294	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCCTTTTTAAACCTT	-33	True	NA	0	True	NA	NA	NA	116687270	116425604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_141020.known	chr9	+	3715	2	FSM	ENSG00000119401.11	ENST00000450136.2	3715	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGTTCTTTTCAT	-24	True	NA	14	True	ATTAAA	-15	NA	116687304	116701299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_116687382_116697661
transcript_141022.known	chr9	+	3688	2	FSM	ENSG00000119401.11	ENST00000373983.2	3688	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTTCTTTTCATC	1	True	NA	15	True	ATTAAA	-16	NA	116687329	116701300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_116687382_116697664
transcript_141026.known	chr9	-	468	1	FSM	ENSG00000230734.1	ENST00000431607.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4559	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTCCAGATCAGTTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	117181095	117180627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_117180600_117181100
transcript_141028.known	chr9	-	3171	8	FSM	ENSG00000078725.13	ENST00000265922.8	3171	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	7.88695642390986	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTTATGCTTAATT	6	True	NA	-20	True	GATAAA	-27	NA	119369435	119166628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
transcript_14103.known	chr1	+	912	5	FSM	ENSG00000143771.12	ENST00000366860.9	912	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	1898.5658403121	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGATTTCTAGTTC	-7	True	NA	45	True	TATAAA	-24	NA	224356886	224375998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224356994_224364108_224364456_224365878_224365992_224371282_224371424_224375794
transcript_141033.known	chr9	-	970	11	FSM	ENSG00000136861.19	ENST00000472883.2	970	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.411182153938	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAGGAAAGAGAAATTG	96	False	NA	-18	True	NA	NA	NA	120580061	120527905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120527926_120528743_120528774_120528892_120528905_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_141035.nic	chr9	-	1199	10	ISM	ENSG00000136861.19	ENST00000693137.1	2090	13	-173	37080	-28	80	5prime_fragment	FALSE	canonical	3	48	junction_5	13.4889071938371	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAATCAAAGGAAAAAAAG	NA	False	NA	62	True	GATAAA	-26	NA	120580198	120527825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_141042.known	chr9	-	8325	9	FSM	ENSG00000119402.18	ENST00000684405.1	8325	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	89.1521697716887	1128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAAGTTAGCCGGGC	23	True	NA	NA	False	ACTAAA	-2	NA	120793382	120753059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120753115_120757719_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788187_120793148_120793258_120793353
transcript_141043.known	chr9	-	9142	8	FSM	ENSG00000119402.18	ENST00000608872.6	9142	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	48.4220391717555	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCGTTGAAGTGTTCT	-11	True	NA	-3	True	NA	NA	NA	120793416	120756973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793353
transcript_141045.known	chr9	-	8498	8	FSM	ENSG00000119402.18	ENST00000684047.1	8498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	79.7493522461059	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAAGTTAGCCGGGC	-12	True	NA	NA	False	ACTAAA	-2	NA	120793367	120753059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120753115_120757719_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148
transcript_141051.nnic	chr9	+	1952	3	NNC	ENSG00000214654.9	novel	3856	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	7.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTTTGAGTCCCTT	-3	True	NA	17	True	AATAAA	-34	NA	120793466	120801787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_120793923_120798574_120799986_120801702
transcript_141054.known	chr9	+	430	2	FSM	ENSG00000214654.9	ENST00000437707.2	3574	2	48	3096	48	-87	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCATGCCTTGCTTTTT	81	False	NA	NA	False	NA	NA	NA	120793550	120798632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_120793923_120798574
transcript_141059.known	chr9	-	3381	10	FSM	ENSG00000095261.14	ENST00000210313.8	3381	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_6	34.24097610239	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTTGACTGCCTATTA	11	True	NA	NA	False	AATAAA	-35	NA	120842922	120816052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_141062.known	chr9	-	1538	9	FSM	ENSG00000095261.14	ENST00000373904.5	1538	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.4161782373627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCAGATGTTACTTT	-18	True	NA	NA	False	NA	NA	NA	120842951	120817795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831831_120831946_120833311_120833457_120842736
transcript_141068.nic	chr9	-	1419	5	ISM	ENSG00000095261.14	ENST00000210313.8	3381	10	-84	12395	-55	-1853	5prime_fragment	FALSE	canonical	3	211	junction_1	49.7795138586146	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATATGAGCTTTTCA	NA	False	NA	NA	False	NA	NA	NA	120843006	120828447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_141069.known	chr9	+	1970	4	FSM	ENSG00000226752.10	ENST00000640066.1	1970	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.5973853695808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTGCCTGTATTGCT	5	True	NA	NA	False	AGTAAA	-29	NA	120843099	120852603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_120843440_120844992_120845197_120847293_120847354_120851237
transcript_141071.known	chr9	+	707	3	FSM	ENSG00000226752.10	ENST00000640391.2	2751	3	0	2044	0	-8	multi-exon	FALSE	canonical	2	3	junction_1	15	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTCTGGATTTCATGT	96	False	NA	NA	False	NA	NA	NA	120842995	120851440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_120843440_120847293_120847354_120851237
transcript_141076.known	chr9	-	567	3	FSM	ENSG00000095261.14	ENST00000471789.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	23	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGTAAACCCCTTTC	51	False	NA	NA	False	AATAAA	-14	NA	120842882	120831669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120831946_120833311_120833457_120842736
transcript_141077.nic	chr9	+	649	2	ISM	ENSG00000226752.10	ENST00000640296.2	1606	4	41	6206	-2	-37	5prime_fragment	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATTTTGTTAACAAAAT	-12	True	NA	NA	False	AAAAAG	-31	NA	120843082	120845284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_120843440_120844992
transcript_141078.known	chr9	+	884	2	FSM	ENSG00000226752.10	ENST00000458394.2	2154	2	1225	45	-413	-45	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGAAATTTTGTT	1056	False	NA	NA	False	AAAAAG	-23	NA	120844299	120845276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_120844900_120844992
transcript_141079.nic	chr9	-	1309	2	ISM	ENSG00000095261.14	ENST00000471789.1	567	3	-104	728	-35	-498	5prime_fragment	FALSE	canonical	3	331	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTGGGGGAAAGGGG	NA	False	NA	NA	False	NA	NA	NA	120842986	120832397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_120833457_120842736
transcript_141080.known	chr9	-	3525	10	FSM	ENSG00000119403.15	ENST00000419155.5	3525	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	8.93322277432968	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTCTTCCCTATAGTGA	9547	False	NA	21	True	TTTAAA	-19	NA	120868911	120855651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120861917_120862006_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120868807
transcript_141081.known	chr9	-	1092	9	FSM	ENSG00000119403.15	ENST00000487555.5	1092	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	10.6997371463041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGGGGTCCTGAAAACC	9614	False	NA	NA	False	NA	NA	NA	120868844	120857929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120868807
transcript_141084.nnic	chr9	-	1166	5	NNC	ENSG00000119403.15	novel	836	5	NA	NA	63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.2976996938086	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	1495	False	NA	-35	True	AATAAA	-27	NA	120876963	120869586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120876535
transcript_141085.nic	chr9	-	814	5	ISM	ENSG00000119403.15	ENST00000436309.5	558	6	-30	288	-30	0	5prime_fragment	FALSE	canonical	0	0	junction_4	41.2976996938086	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	1402	False	NA	-35	True	AATAAA	-27	NA	120877056	120869586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120876980
transcript_141086.known	chr9	-	836	5	FSM	ENSG00000119403.15	ENST00000312189.10	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	8.4372685153431	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	-6	True	NA	-35	True	AATAAA	-27	NA	120877188	120869586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_141097.nic	chr9	-	3336	21	NIC	ENSG00000106804.8	novel	540	3	NA	NA	-370	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	14.4062486442516	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTGGATTCTATTACA	NA	False	NA	-33	True	AATAAA	-11	NA	121050645	120999676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_121000052_121005918_121006059_121006903_121006978_121008407_121008499_121013872_121014071_121015198_121015262_121016253_121016384_121017361_121017512_121017642_121017853_121019975_121020180_121021508_121021695_121023403_121023520_121025453_121025581_121027159_121027275_121030396_121030488_121032112_121032196_121034802_121034895_121037880_121037952_121043003_121043167_121046190_121046384_121050181
transcript_141099.nic	chr9	-	2072	16	ISM	ENSG00000106804.8	ENST00000223642.3	5464	41	-1	62881	-1	10480	5prime_fragment	FALSE	canonical	3	51	junction_10	10.319345371141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATAGAAGAAATAGGTA	-3	True	NA	15	True	AAGAAA	-29	NA	121050276	121015215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_121015262_121016253_121016384_121017361_121017512_121017642_121017853_121019975_121020180_121021508_121021695_121023403_121023520_121025453_121025581_121027159_121027275_121030396_121030488_121032112_121032196_121034802_121034895_121037880_121037952_121043003_121043167_121046190_121046384_121050181
transcript_141103.known	chr9	-	5464	41	FSM	ENSG00000106804.8	ENST00000223642.3	5464	41	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_21	10.5952524745756	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCTAAAAAGCCTGTTA	-2	True	NA	-12	True	ATTAAA	-20	NA	121050275	120952334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120952869_120953729_120953869_120957284_120957369_120960247_120960338_120961481_120961566_120962670_120962777_120962892_120962968_120963635_120963739_120969060_120969119_120970169_120970252_120971929_120971993_120974778_120974932_120976699_120976906_120980082_120980255_120981843_120981940_120982654_120982815_120989045_120989122_120989567_120989781_120991190_120991281_120996239_120996301_120997546_120997775_121005918_121006059_121006903_121006978_121008407_121008499_121013872_121014071_121015198_121015262_121016253_121016384_121017361_121017512_121017642_121017853_121019975_121020180_121021508_121021695_121023403_121023520_121025453_121025581_121027159_121027275_121030396_121030488_121032112_121032196_121034802_121034895_121037880_121037952_121043003_121043167_121046190_121046384_121050181
transcript_141104.nic	chr9	+	2185	10	ISM	ENSG00000119397.19	ENST00000687169.1	9959	43	-563	63739	-261	0	5prime_fragment	FALSE	canonical	3	11	junction_1	5.97112393001973	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTGGAAGACAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	121074398	121113691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_121075068_121080305_121080479_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501
transcript_141106.nic	chr9	+	1779	9	ISM	ENSG00000119397.19	ENST00000373847.6	5449	32	-330	47814	-28	0	5prime_fragment	FALSE	canonical	3	16	junction_1	4.38570119821221	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTGGAAGACAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	121074631	121113691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_121075068_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501
transcript_141110.nic	chr9	+	1393	7	ISM	ENSG00000119397.19	ENST00000687169.1	9959	43	-7	78590	0	-10	5prime_fragment	FALSE	canonical	3	11	junction_1	6.18241233033047	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACAAAGTAACAGGGG	-4	True	NA	NA	False	NA	NA	NA	121074954	121098840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_121075068_121080305_121080479_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385
transcript_141112.nic	chr9	+	1294	6	FSM	ENSG00000119397.19	ENST00000687079.1	1305	6	1	10	1	-10	multi-exon	FALSE	canonical	3	16	junction_1	4.16653333119993	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACAAAGTAACAGGGG	NA	False	NA	NA	False	NA	NA	NA	121074880	121098840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_121075068_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385
transcript_141116.known	chr9	+	2595	18	FSM	ENSG00000148180.21	ENST00000432226.7	2595	18	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	47.2515172492158	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	-7	True	NA	16	True	AATAAA	-17	NA	121268161	121332842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_121268220_121281469_121281563_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_141119.known	chr9	-	4149	8	FSM	ENSG00000119396.11	ENST00000373840.9	4149	8	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	13.9532747966569	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCACTGTGCTGCTCT	15	True	NA	NA	False	AATAAA	-19	NA	121201869	121178132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121181574_121182929_121182961_121183310_121183399_121186952_121187020_121190553_121190732_121192170_121192225_121193360_121193420_121201638
transcript_141127.known	chr9	+	571	3	FSM	ENSG00000227355.4	ENST00000637541.1	571	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACATATGCAAAAATCT	274	False	NA	NA	False	AATAGA	-23	NA	121370490	121378057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_121370824_121375214_121375326_121377930
transcript_141135.nnic	chr9	-	680	3	NIC	ENSG00000119421.7	novel	804	4	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	120	junction_2	597	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	NA	False	NA	-11	True	ATTAAA	-15	NA	122159819	122144057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_122144379_122148111_122148278_122159626
transcript_141137.known	chr9	-	804	4	FSM	ENSG00000119421.7	ENST00000373768.4	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_3	48.6415460280612	6117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-11	True	NA	-11	True	ATTAAA	-15	NA	122159779	122144057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122144379_122148111_122148278_122152244_122152409_122159626
transcript_141138.known	chr9	+	703	5	FSM	ENSG00000185681.13	ENST00000373764.8	703	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCCCAGGTGTATTTTC	-11	True	NA	NA	False	AATAAA	-16	NA	122159907	122200083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122160020_122166767_122166916_122169644_122169757_122174495_122174628_122199884
transcript_141139.known	chr9	+	596	4	FSM	ENSG00000185681.13	ENST00000536616.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTGTATTTTCCTTAA	-11	True	NA	NA	False	AATAAA	-21	NA	122159907	122200088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122160020_122166767_122166916_122174495_122174628_122199884
transcript_141141.known	chr9	-	666	2	FSM	ENSG00000106852.16	ENST00000464484.3	666	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCGATGCCAACGGCCT	-3	True	NA	NA	False	NA	NA	NA	122213922	122204431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122204781_122213605
transcript_141144.known	chr9	+	1186	9	FSM	ENSG00000148187.18	ENST00000470366.5	1186	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	55.670908022054	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGACTTCTCTCCCTCC	8	False	NA	NA	False	NA	NA	NA	122264925	122322678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122285779_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
transcript_141161.known	chr9	+	9594	7	FSM	ENSG00000148187.18	ENST00000344641.8	9594	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	11.0302614051829	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGTTGGTGATTCTTT	5	True	NA	NA	False	ATTAAA	-21	NA	122264881	122331337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_141167.known	chr9	+	1176	6	FSM	ENSG00000148187.18	ENST00000373723.9	1176	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	55.4422221776869	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTGGATTGATGATC	18	True	NA	NA	False	AATAAA	-36	NA	122264894	122323092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122322539
transcript_141172.known	chr9	+	1841	6	FSM	ENSG00000148187.18	ENST00000297908.7	1841	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	54.3197938140417	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	NA	False	NA	12	True	AATAAA	-23	NA	122264602	122323461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122264939_122270863_122271076_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_141183.nic	chr9	+	1698	2	ISM	ENSG00000148187.18	ENST00000441707.5	858	5	-24	18204	-19	-18204	5prime_fragment	FALSE	canonical	3	15	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAATTCAGGCCGG	-14	True	NA	NA	False	NA	NA	NA	122264862	122267083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_122264939_122265461
transcript_141185.known	chr9	+	1501	5	FSM	ENSG00000148187.18	ENST00000394315.3	1501	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	61.8081709808663	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	27	False	NA	12	True	AATAAA	-23	NA	122270863	122323461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122322539
transcript_141186.known	chr9	+	5020	11	FSM	ENSG00000095303.17	ENST00000362012.7	5020	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	3.53411940941446	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTATTTGTGGGGG	1	True	NA	3	True	AATAAA	-15	NA	122371023	122395703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122371092_122371185_122371273_122377898_122378016_122378432_122378574_122378774_122378919_122381370_122381553_122381663_122381748_122383508_122383756_122386445_122386733_122390197_122390346_122392188
transcript_141191.known	chr9	-	3017	4	FSM	ENSG00000136940.14	ENST00000259467.9	3017	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	43.5303214884624	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTTCACCATGTTGGCC	-9	True	NA	NA	False	NA	NA	NA	122828588	122818096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122820637_122823015_122823198_122826615_122826793_122828470
transcript_141196.nnic	chr9	-	1058	3	NIC	ENSG00000136940.14	novel	3017	4	NA	NA	-61	604	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	154	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATGCTGAATAACCTT	NA	False	NA	NA	False	AATAAA	-18	NA	122828649	122819939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_122820637_122823015_122823198_122828470
transcript_141198.known	chr9	-	4099	2	FSM	ENSG00000186130.5	ENST00000373659.4	4099	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGTGTTTTGTCTTC	-8	True	NA	-4	True	AATAAA	-18	NA	122913323	122908055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122912082_122913250
transcript_14120.known	chr1	+	1525	4	FSM	ENSG00000143771.12	ENST00000468318.5	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1806.96731815738	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGTTTGTGGTTTAAT	-6	True	NA	11	True	AATAAA	-19	NA	224356887	224376884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224357069_224365878_224365992_224371282_224371424_224375794
transcript_141200.known	chr9	-	4455	2	FSM	ENSG00000171448.9	ENST00000373656.4	4455	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTCATTGGTTAT	-4	True	NA	NA	False	AATAAA	-16	NA	122931512	122915565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122919945_122931436
transcript_141203.nnic	chr9	+	1473	2	Intergenic	novelGene_85	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACTAAAGGAAGACATGAA	-9	True	NA	NA	False	AAAACA	-15	NA	122931683	122937622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr9_+_122931878_122936343
transcript_141205.known	chr9	+	914	1	FSM	ENSG00000261094.2	ENST00000566531.1	914	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACCTTGTCCATTTCTG	7727	False	NA	25	True	AATAAA	-27	NA	122939419	122940333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122939400_122940300
transcript_141206.known	chr9	+	4986	26	FSM	ENSG00000011454.18	ENST00000373647.9	4986	26	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	25.3598107248457	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	-11	True	NA	77	True	ATTAAA	-19	NA	122941019	123104866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
transcript_141214.nic	chr9	+	1515	10	ISM	ENSG00000011454.18	ENST00000373647.9	4986	26	-18	106100	-18	1431	5prime_fragment	FALSE	canonical	3	165	junction_1	19.634311111916	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGTATTTTTCTATTAA	9309	False	NA	NA	False	ACTAAA	-5	NA	122941001	122998766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596
transcript_141215.known	chr9	+	2186	5	FSM	ENSG00000011454.18	ENST00000317419.7	2186	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	19.5512147960172	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	122941019	122990769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296
transcript_141218.known	chr9	+	572	4	FSM	ENSG00000011454.18	ENST00000459903.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	96.2219656142331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGAGACTGGTTTGTTG	-11	True	NA	NA	False	NA	NA	NA	122941019	122986416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122941094_122957148_122957210_122984484_122984720_122986214
transcript_141222.known	chr9	-	325	2	FSM	ENSG00000286718.2	ENST00000656036.2	519	2	0	194	0	-194	multi-exon	FALSE	canonical	1	1	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAAGCGGACTGGGTA	-6	True	NA	NA	False	NA	NA	NA	122941260	122940732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122940936_122941138
transcript_141224.known	chr9	-	3612	21	FSM	ENSG00000119522.17	ENST00000373620.7	3612	21	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	17.3097515868946	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTACTTCCATTAC	3	True	NA	NA	False	ACTAAA	-13	NA	123930126	123400098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
transcript_141243.known	chr9	-	967	7	FSM	ENSG00000136930.13	ENST00000498485.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	975.589294848105	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGGCACTGTGTGGT	180	False	NA	-5	True	AATAAA	-26	NA	124415291	124353465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124412351_124412493_124413907_124414006_124414841_124414936_124415112
transcript_141244.known	chr9	-	984	8	FSM	ENSG00000136930.13	ENST00000259457.8	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	1951	junction_2	126.403468048523	25068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-3	True	NA	-4	True	AATAAA	-27	NA	124415442	124353464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
transcript_141247.nic	chr9	-	1146	2	ISM	ENSG00000148200.17	ENST00000475178.1	742	5	-78	15471	-78	-15471	5prime_fragment	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGTCAAGC	-20	True	NA	NA	False	NA	NA	NA	124595886	124553562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_124554571_124595748
transcript_141269.known	chr9	-	452	4	FSM	ENSG00000136942.15	ENST00000348462.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	21296	junction_3	2938.86814947524	254413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-2	True	NA	-19	True	AATAAA	-17	NA	124861957	124857882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124858068_124860182_124860265_124861418_124861556_124861909
transcript_141270.known	chr9	-	785	3	FSM	ENSG00000136942.15	ENST00000487431.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	25379	junction_1	1546.5	4342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	7100	False	NA	-19	True	AATAAA	-17	NA	124861936	124857882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124858068_124860182_124860265_124861418
transcript_141271.known	chr9	-	493	5	FSM	ENSG00000136942.15	ENST00000373570.8	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	12637.8109160566	3433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCCTGGCACTTCC	7121	False	NA	-16	True	AATAAA	-20	NA	124861915	124857879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124858068_124858457_124858538_124860182_124860265_124861418_124861556_124861909
transcript_141272.known	chr9	-	649	2	FSM	ENSG00000136942.15	ENST00000495728.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	21296	junction_1	0	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGTAGTCCCAGCTAC	7055	False	NA	NA	False	NA	NA	NA	124861981	124860978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124861556_124861909
transcript_141276.known	chr9	+	1325	4	FSM	ENSG00000136950.13	ENST00000259477.6	1325	4	0	0	0	0	multi-exon	FALSE	canonical	1	406	junction_1	370.945638425183	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAATAATTGATCTA	19	True	NA	NA	False	AATAAA	-7	NA	124869204	124877717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_124869440_124873691_124873765_124874974_124875152_124876877
transcript_141279.known	chr9	+	2507	6	FSM	ENSG00000136950.13	ENST00000353214.6	2507	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	534.300065506266	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGCTTTAAAAGTCTTC	6	True	NA	NA	False	AATAAA	-23	NA	124862129	124877733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_124862399_124863987_124864108_124868427_124869440_124873691_124873765_124874974_124875152_124876877
transcript_14128.known	chr1	+	4096	5	FSM	ENSG00000143771.12	ENST00000465271.6	4096	5	0	0	0	0	multi-exon	FALSE	canonical	3	3732	junction_1	68.2678548073689	6371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	-15	True	NA	NA	False	AATAAA	-24	NA	224356878	224379452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224375794
transcript_141280.known	chr9	-	1968	19	FSM	ENSG00000173611.18	ENST00000373549.8	1968	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.4927958825138	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTTTTCATTTTCCA	0	True	NA	NA	False	ATTAAA	-19	NA	125143496	124952787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125065989_125066059_125142632_125142678_125143384
transcript_141281.known	chr9	-	12111	18	FSM	ENSG00000173611.18	ENST00000336505.11	12111	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.0286786000783	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGGTACTTTTTCGGT	6115	False	125143547	-2	True	AATAAA	-16	NA	125143528	124942607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
transcript_141287.nnic	chr9	-	782	5	NNC	ENSG00000173611.18	novel	546	2	NA	NA	0	-52293	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	17.8044938147649	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTACTTTTGGTATT	6115	False	125143547	-8	True	AATAAA	-27	NA	125143528	125052203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_125052596_125055875_125056008_125065989_125066059_125142632_125142678_125143384
transcript_141288.nnic	chr9	-	814	4	NNC	ENSG00000173611.18	novel	546	2	NA	NA	-101	-52293	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	9.56846672960488	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTACTTTTGGTATT	6014	False	NA	-8	True	AATAAA	-27	NA	125143629	125052203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_125052596_125055875_125056008_125142632_125142678_125143384
transcript_141289.nnic	chr9	-	834	3	NNC	ENSG00000173611.18	novel	546	2	NA	NA	-5	593	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	31.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTTTTCTTATTGCTTT	-15	True	NA	NA	False	AATAAA	-14	NA	125143511	125141660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_125142323_125142632_125142678_125143384
transcript_14129.known	chr1	+	808	5	FSM	ENSG00000143771.12	ENST00000366856.3	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	1612.38929852564	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	-1	True	NA	NA	False	AATAAA	-24	NA	224356892	224379452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224379068
transcript_141290.known	chr9	-	546	2	FSM	ENSG00000173611.18	ENST00000468569.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGGAGGATCATTTGA	-10	True	NA	NA	False	NA	NA	NA	125143506	125142253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125142678_125143384
transcript_141293.known	chr9	-	4877	23	FSM	ENSG00000136935.14	ENST00000373555.9	4877	23	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_22	9.21281895284235	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAGGGCTAGAGAATGT	3	True	NA	72	True	ATTAAA	-41	NA	124941083	124878274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124880611_124881170_124881258_124881783_124881955_124882509_124882570_124888252_124888397_124889142_124889304_124889433_124889537_124890388_124890479_124898548_124898645_124899328_124899479_124900451_124900548_124908376_124908473_124911900_124912027_124921128_124921241_124921722_124921893_124923094_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940970
transcript_141296.nic	chr9	-	732	2	ISM	ENSG00000136935.14	ENST00000373555.9	4877	23	-2	61264	-2	8068	5prime_fragment	FALSE	canonical	3	39	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTCATTGGAGGTAAT	1	True	NA	NA	False	AAAAAG	-12	NA	124941085	124939538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_124940156_124940970
transcript_141299.known	chr9	-	4349	8	FSM	ENSG00000119414.12	ENST00000451402.5	4349	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	185.545307740427	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGCTTGACTGGTG	NA	False	NA	-2	True	ATTAAA	-17	NA	125189939	125146573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125188918_125188948_125189561
transcript_1413.nnic	chr1	+	490	3	NIC	ENSG00000162444.12	novel	861	5	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	33	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTTTTTCCTTTCC	-2	True	NA	12	True	AATAAA	-14	NA	9997182	10016020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_9997332_10008172_10008275_10015781
transcript_14130.known	chr1	+	702	4	FSM	ENSG00000143771.12	ENST00000366858.7	702	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1772.1467207881	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	-3	True	NA	NA	False	AATAAA	-24	NA	224356857	224379452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224379068
transcript_141301.known	chr9	-	4103	7	FSM	ENSG00000119414.12	ENST00000373547.9	4103	7	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_2	21.4864298259778	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGCTTGACTGGTGA	-17	True	NA	-1	True	ATTAAA	-18	NA	125189803	125146572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125189643
transcript_141304.known	chr9	+	1466	9	FSM	ENSG00000136933.17	ENST00000394125.8	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	81.8503779771358	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	6	True	NA	113	True	ACTAAA	-20	NA	125200541	125234158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_14131.known	chr1	+	518	2	FSM	ENSG00000143771.12	ENST00000469200.1	518	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGTTCTATTGCTTTTT	NA	False	NA	NA	False	AATAAA	-31	NA	224377050	224379459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224377178_224379068
transcript_141314.known	chr9	+	1313	8	FSM	ENSG00000136933.17	ENST00000259460.12	1313	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	109.687868843499	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	6	True	NA	113	True	ACTAAA	-20	NA	125200541	125234158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_141317.known	chr9	+	1671	8	FSM	ENSG00000136933.17	ENST00000373538.8	1671	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	58.2377253424378	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTGGGAATGACTTTCA	6	True	NA	NA	False	ACTAAA	-23	NA	125200541	125234161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_14132.known	chr1	+	2539	6	FSM	ENSG00000143786.8	ENST00000272133.4	2539	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1.93907194296653	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	2	True	NA	17	True	ATTAAA	-18	NA	224616316	224740554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224617256_224680957_224681027_224684795_224684844_224730461_224730575_224734562_224734707_224739328
transcript_141330.nic	chr9	+	1357	7	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	0	-158	intron_retention	FALSE	canonical	3	32	junction_3	98.2937773547576	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	6	True	NA	16	True	AATAAA	-17	NA	125200541	125234000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_141339.nnic	chr9	+	1195	6	NIC	ENSG00000136933.17	novel	1671	8	NA	NA	0	-158	intron_retention	FALSE	canonical	3	42	junction_3	103.186045568187	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	6	True	NA	16	True	AATAAA	-17	NA	125200541	125234000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_125200907_125203007_125203067_125207563_125207722_125227909_125228060_125232595_125232746_125233687
transcript_141351.known	chr9	-	3921	8	FSM	ENSG00000044574.9	ENST00000324460.7	3921	8	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_5	448.228394769398	6423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTCTGATGTCTATA	-4	True	NA	-8	True	ATTAAA	-15	NA	125241343	125234852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_141352.known	chr9	-	3221	7	FSM	ENSG00000044574.9	ENST00000680234.1	3221	7	0	0	0	0	multi-exon	FALSE	canonical	3	5358	junction_4	482.553854219632	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCTGTAATATTGTAAATA	NA	False	NA	NA	False	AAAAAG	-26	NA	125241382	125236577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_141360.known	chr9	+	3190	8	FSM	ENSG00000165219.23	ENST00000394084.5	3190	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	71.239750426404	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACACTTATTGGTGTTT	9	True	NA	NA	False	AATAAA	-16	NA	125261828	125309300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125261960_125268935_125268985_125295457_125295575_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690
transcript_141361.known	chr9	+	3720	16	FSM	ENSG00000165219.23	ENST00000497580.5	3720	16	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_12	48.1788335267677	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGGGAGAGCTGCTTTC	-26	True	NA	NA	False	NA	NA	NA	125261793	125341864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125261960_125298889_125299107_125301982_125302827_125305062_125305150_125307412_125307548_125307690_125307881_125312451_125312613_125321432_125321563_125323797_125323924_125326415_125326590_125330077_125330219_125331925_125332018_125332509_125332630_125337017_125337096_125337220_125337592_125341176
transcript_141362.known	chr9	-	3369	12	FSM	ENSG00000119487.17	ENST00000265960.8	3369	12	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_4	173.088426261796	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-3	True	NA	NA	False	AATAAA	-18	NA	125707208	125437393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_141363.known	chr9	-	3256	11	FSM	ENSG00000119487.17	ENST00000350766.7	3256	11	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_4	147.322774885623	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	2	True	NA	NA	False	AATAAA	-18	NA	125707203	125437393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_141364.known	chr9	-	1586	8	FSM	ENSG00000119487.17	ENST00000394060.7	1586	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	291.531144413878	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	-26	False	NA	0	True	AATAAA	-22	NA	125707231	125521467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_141367.known	chr9	-	769	4	FSM	ENSG00000119487.17	ENST00000433483.1	769	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.950360212944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAGAGACAAAACCAG	3	True	NA	-29	True	NA	NA	NA	125707202	125669886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125669908_125672315_125672644_125696216_125696405_125706970
transcript_141368.known	chr9	+	2840	9	FSM	ENSG00000167081.18	ENST00000373489.10	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	39.9898424603048	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	5	True	NA	NA	False	AATAAA	-22	NA	125747372	125967377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
transcript_141371.known	chr9	+	421	3	FSM	ENSG00000196814.15	ENST00000470567.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCTATTCTTATGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	126395639	126448409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126395698_126421853_126421949_126448141
transcript_141372.known	chr9	+	5940	3	FSM	ENSG00000169155.10	ENST00000373464.5	5940	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	1	True	NA	18	True	AATAAA	-24	NA	126805039	126838210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126805133_126808792_126808916_126832486
transcript_141374.known	chr9	+	710	2	FSM	ENSG00000169155.10	ENST00000450858.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACTCGTCCACAGAGC	-6	True	NA	NA	False	NA	NA	NA	126805032	126833096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126805133_126832486
transcript_141376.known	chr9	+	6564	2	FSM	ENSG00000177125.5	ENST00000319119.4	6564	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGGTCTCCCTCTG	13	True	NA	33	True	AATAAA	-18	NA	126860664	126885878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126860740_126879389
transcript_14138.known	chr1	+	968	3	FSM	ENSG00000143786.8	ENST00000483512.5	968	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTTTGGTTGGAACTC	37	False	NA	NA	False	NA	NA	NA	224434911	224521555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224435188_224515740_224515877_224520999
transcript_141380.known	chr9	+	869	4	FSM	ENSG00000136828.19	ENST00000480993.1	869	4	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	57.0788927713213	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAAAAAAAGCATAT	1	True	NA	NA	False	NA	NA	NA	126915449	126978306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126915477_126962224_126962347_126965843_126965952_126977694
transcript_141384.known	chr9	-	3443	5	FSM	ENSG00000136859.10	ENST00000373425.8	3443	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	8.31790237980706	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATGTATCTACACTCT	-2	True	NA	-15	True	AATAAA	-15	NA	127122635	127087347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127107914_127108781_127122314
transcript_141386.nic	chr9	-	1495	3	NIC	ENSG00000136859.10	novel	312	2	NA	NA	-126	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	20.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGCTTTCGGTACCAT	NA	False	NA	NA	False	CATAAA	-22	NA	127122761	127106924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127107107_127107914_127108781_127122314
transcript_141394.known	chr9	+	628	1	FSM	ENSG00000271833.1	ENST00000607259.1	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGTGGAGGAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	127366769	127367397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127366800_127367400
transcript_141395.known	chr9	+	1763	8	FSM	ENSG00000136856.18	ENST00000610552.4	1763	8	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_1	63.4211707394241	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAGCAAAAAA	-2	True	NA	NA	False	NA	NA	NA	127397137	127407855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_1414.known	chr1	+	4772	27	FSM	ENSG00000130939.20	ENST00000253251.12	4772	27	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_13	35.0977502271288	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCCTCTCCCCCT	NA	False	NA	-45	True	NA	NA	NA	10032831	10180367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
transcript_141401.known	chr9	+	914	7	FSM	ENSG00000136856.18	ENST00000373352.5	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	89.6358373271167	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCCAAGCCCAGAGCCC	-2	True	NA	NA	False	NA	NA	NA	127397225	127407291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127397287_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_141406.known	chr9	+	1030	7	FSM	ENSG00000136856.18	ENST00000430147.1	1030	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	75.4578616771565	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACACAGAAAATCAGGTC	1784	False	NA	12	True	AATAAA	-3	NA	127399963	127407652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407435
transcript_141407.known	chr9	+	2078	5	FSM	ENSG00000196152.10	ENST00000342483.5	2078	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.83282518435822	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACGCTCAGCTCTCCA	-33	True	NA	16	True	AATAAA	-24	NA	127424381	127445372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127424804_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_141408.known	chr9	+	2192	5	FSM	ENSG00000196152.10	ENST00000612342.4	2192	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.13557004763649	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	NA	False	NA	15	True	AATAAA	-23	NA	127424373	127445371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127424911_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_141425.known	chr9	-	634	7	FSM	ENSG00000197958.13	ENST00000361436.10	634	7	0	0	0	0	multi-exon	FALSE	canonical	3	3317	junction_1	2225.11862355446	177258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-3	True	NA	-10	True	AATAAA	-23	NA	127451406	127447673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
transcript_141426.known	chr9	-	864	7	FSM	ENSG00000197958.13	ENST00000497825.5	864	7	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_6	3665.5844463514	9300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-2	True	NA	-10	True	AATAAA	-23	NA	127451405	127447673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451049
transcript_141427.known	chr9	-	2275	4	FSM	ENSG00000197958.13	ENST00000497322.1	2275	4	0	0	0	0	multi-exon	FALSE	canonical	3	9099	junction_3	315.246288197375	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGATTTTCTGGTGTGGC	-2	True	NA	-16	True	AATAAA	-17	NA	127451405	127447679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127447990_127448336_127448424_127449280_127449363_127449609
transcript_141428.known	chr9	-	499	6	FSM	ENSG00000197958.13	ENST00000536368.1	499	6	0	0	0	0	multi-exon	FALSE	canonical	2	210	junction_4	3794.59373319464	6061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTCTGGTGTGGCGTC	60	False	NA	-13	True	AATAAA	-20	NA	127451373	127447676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127450730_127450805_127451280
transcript_14143.known	chr1	+	778	4	FSM	ENSG00000143786.8	ENST00000498126.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGTGCATGTTGTCCTTG	50	False	NA	NA	False	ATTAAA	-16	NA	224434924	224521222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224435188_224513780_224513937_224515740_224515877_224520999
transcript_141430.known	chr9	+	3120	26	FSM	ENSG00000148356.15	ENST00000300417.11	3120	26	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_1	19.7251514569597	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-7	True	NA	24	True	AATAAA	-16	NA	127451509	127503499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_141432.known	chr9	+	3376	25	FSM	ENSG00000148356.15	ENST00000323301.8	3376	25	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	17.6729057379431	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	-4	True	NA	24	True	AATAAA	-16	NA	127451512	127503499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_141434.known	chr9	+	3754	19	FSM	ENSG00000136854.24	ENST00000373299.5	3754	19	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	23.3679637194827	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTGTCCAGGGGGCTC	6	True	NA	10	True	AATAAA	-20	NA	127612276	127692699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
transcript_141437.known	chr9	+	566	2	FSM	ENSG00000136854.24	ENST00000476182.3	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTTTCCAATGATTCT	90	False	NA	4	True	AATAAA	-15	NA	127612360	127613751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127612441_127613265
transcript_141438.known	chr9	+	591	2	FSM	ENSG00000136854.24	ENST00000496504.3	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATGTTCCTCAGATTTT	2727	False	NA	NA	False	GATAAA	-25	NA	127661132	127663722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127661206_127663204
transcript_14144.known	chr1	-	7367	14	FSM	ENSG00000162923.17	ENST00000414423.9	7367	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	21.2689177887669	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTTGGTGTGTTACAT	-11	True	NA	NA	False	AATAAA	-18	NA	224434797	224385145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431476_224431582_224431681_224431782_224433683
transcript_141441.nic	chr9	-	1516	4	ISM	ENSG00000160404.18	ENST00000373284.10	1500	5	539	0	520	0	3prime_fragment	FALSE	canonical	3	54	junction_3	16.8193010820572	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTGCTAAGACTTTT	553	False	NA	-8	True	AATAAA	-19	NA	127734755	127731523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_127732279_127732563_127732692_127733384_127733561_127734298
transcript_141444.nic	chr9	-	1388	3	ISM	ENSG00000160404.18	ENST00000336067.10	1370	4	537	0	520	0	3prime_fragment	FALSE	canonical	3	15	junction_1	19.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTGCTAAGACTTTT	553	False	NA	-8	True	AATAAA	-19	NA	127734755	127731523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_127732279_127733384_127733561_127734298
transcript_141445.nic	chr9	+	1086	2	ISM	ENSG00000160401.15	ENST00000496009.5	2374	8	1	3717	1	-3717	5prime_fragment	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTTGTCATTACTGTC	-4	True	NA	NA	False	AAAACA	-4	NA	127706989	127710304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_127707193_127709421
transcript_141446.known	chr9	-	962	5	FSM	ENSG00000187024.15	ENST00000543175.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	19.9170153386495	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGTGCAGTGGCTCAC	-6	True	NA	NA	False	ATTAAA	-15	NA	127715663	127713806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127714283_127714378_127714425_127714602_127714703_127714974_127715195_127715543
transcript_141449.known	chr9	+	2483	7	FSM	ENSG00000136807.14	ENST00000373264.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	66.2354805892498	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTGGAG	-27	True	NA	NA	False	AGTAAA	-16	NA	127786033	127790792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788386_127788543_127788693_127789177
transcript_14145.known	chr1	-	6502	14	FSM	ENSG00000162923.17	ENST00000651911.2	6502	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	20.3513516699235	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAATACCTAAATAATT	3038	False	NA	NA	False	AATAAA	-3	NA	224433995	224385160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224389861_224393827_224394014_224398096_224398227_224398514_224398594_224398888_224399035_224400949_224401070_224404429_224404571_224411426_224411566_224418259_224418417_224419517_224419616_224424517_224424655_224431524_224431582_224431681_224431782_224433683
transcript_141450.known	chr9	+	2278	15	FSM	ENSG00000136877.15	ENST00000373225.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	145.416239303116	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAAAGCCTTCGACT	220	False	NA	6	True	ATTAAA	-18	NA	127803207	127814059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127803405_127804284_127804414_127804498_127804553_127804635_127804701_127806972_127807088_127807208_127807287_127807420_127807483_127807585_127807689_127808233_127808312_127808557_127808706_127808799_127808890_127809683_127809835_127810030_127810107_127810944_127811012_127813194
transcript_141452.known	chr9	+	560	3	FSM	ENSG00000136877.15	ENST00000475270.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	3	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTGGAGCCCGCACT	2772	False	NA	NA	False	NA	NA	NA	127809993	127813574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127810107_127810944_127811012_127813194
transcript_141453.nnic	chr9	-	2145	11	NNC	ENSG00000106991.14	novel	2946	15	NA	NA	-1236	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_10	4.86723740945518	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGTTGGGCTGGGAG	8038	False	NA	-2	True	AATAAA	-17	NA	127825641	127815015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825450
transcript_141455.known	chr9	-	2192	7	FSM	ENSG00000106992.19	ENST00000644144.2	2192	7	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_6	19.3168032782055	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAATCTATTGAAAGAAG	-2	True	NA	NA	False	AATAAA	-19	NA	127877675	127866485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
transcript_141458.known	chr9	-	2357	7	FSM	ENSG00000160408.16	ENST00000291839.10	2357	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	135.652333395174	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTTCGTGTCCTGTGT	16	True	NA	-21	True	AATAAA	-12	NA	127899574	127885325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127886789_127887483_127887592_127890655_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
transcript_141462.known	chr9	-	2424	6	FSM	ENSG00000160408.16	ENST00000373141.5	2424	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	164.801699020368	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-3	True	NA	-17	True	AATAAA	-16	NA	127897408	127885321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897237
transcript_141463.known	chr9	-	2406	6	FSM	ENSG00000160408.16	ENST00000373144.7	2406	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	88.1421579041494	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-1	True	NA	-17	True	AATAAA	-16	NA	127899655	127885321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_141465.known	chr9	-	505	5	FSM	ENSG00000160408.16	ENST00000463086.5	505	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	174.345024305255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGAGCCCAAGGGGCCG	-3	True	NA	NA	False	NA	NA	NA	127899593	127886753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127886789_127887483_127887592_127894511_127894692_127896241_127896333_127899502
transcript_14147.known	chr1	-	3958	4	FSM	ENSG00000233384.3	ENST00000437416.3	3958	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.31245915016974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTCTGAAGCCTGCCT	NA	False	NA	NA	False	AATAAA	-8	NA	224616220	224608129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224611593_224615203_224615428_224615611_224615737_224616074
transcript_141482.nnic	chr9	-	1560	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	39.6838198206216	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-27	True	NA	-10	True	NA	NA	NA	127917044	127907885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_127908169_127908317_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_141487.nnic	chr9	-	1559	7	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	39.6838198206216	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-27	True	NA	-10	True	NA	NA	NA	127917044	127907885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_127908175_127908324_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_14149.nnic	chr1	-	778	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-214	-513	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	3.55902608401044	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGAAGTAAGGCATTC	NA	False	NA	-7	True	AATAAA	-19	NA	224616434	224611400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_224611593_224615203_224615428_224615611_224615737_224616197
transcript_141502.known	chr9	-	1706	6	FSM	ENSG00000136840.19	ENST00000335791.10	1706	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	16.4146276229466	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-24	True	NA	-10	True	NA	NA	NA	127917041	127907885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_141510.known	chr9	-	1013	5	FSM	ENSG00000136840.19	ENST00000361444.3	1013	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	38.0878917767839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCCAAGAAGAGGCCCA	21	True	NA	NA	False	NA	NA	NA	127916996	127908446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_141511.nic	chr9	-	1601	5	NIC	ENSG00000136840.19	novel	1706	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	47.14604967545	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-27	True	NA	-10	True	NA	NA	NA	127917044	127907885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127908582_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_141519.known	chr9	-	2176	10	FSM	ENSG00000167103.12	ENST00000388747.9	2176	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	34.3223643031482	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-1	True	NA	-8	True	ATTAAA	-19	NA	127930777	127920880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296_127927332_127927647_127927773_127928064_127928220_127928432_127928484_127929687_127929886_127930722
transcript_141535.known	chr9	-	1104	5	FSM	ENSG00000167103.12	ENST00000300432.3	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	18.9340962287615	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	7920	False	NA	-6	True	AATAAA	-20	NA	127927491	127921528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296
transcript_141536.nic	chr9	-	1692	5	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	16	junction_2	31.2609980646812	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	9977	False	NA	-8	True	ATTAAA	-19	NA	127927522	127920880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127922115_127925106_127925261_127925957_127925980_127927152_127927209_127927296
transcript_141543.nic	chr9	-	1670	4	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	-31	0	intron_retention	FALSE	canonical	3	21	junction_2	31.1376870617513	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	9977	False	NA	-8	True	ATTAAA	-19	NA	127927522	127920880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127922115_127925106_127925261_127927152_127927209_127927296
transcript_141546.known	chr9	-	694	4	FSM	ENSG00000167103.12	ENST00000464759.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	29.6348143611905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTCGCCTGCGCTTCC	8027	False	NA	NA	False	NA	NA	NA	127927384	127921775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927296
transcript_141559.known	chr9	-	912	4	FSM	ENSG00000136908.18	ENST00000314392.13	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	257.294902138901	3368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-13	True	NA	-9	True	AATAAA	-16	NA	127937854	127935098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127935781_127936552_127936656_127937433_127937524_127937817
transcript_141563.nnic	chr9	-	1300	3	NIC	ENSG00000136908.18	novel	912	4	NA	NA	-478	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_2	547	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	6334	False	NA	-9	True	AATAAA	-16	NA	127938332	127935098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127935781_127936552_127936656_127937817
transcript_141564.known	chr9	-	1662	3	FSM	ENSG00000136908.18	ENST00000495270.1	1662	3	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_2	311.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	15	True	NA	-9	True	AATAAA	-16	NA	127937826	127935098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127935781_127936552_127937524_127937817
transcript_141566.known	chr9	-	744	2	FSM	ENSG00000136908.18	ENST00000473360.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACGTTGGACTTAGCAGG	6887	False	NA	NA	False	NA	NA	NA	127937779	127935382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127935781_127937433
transcript_141567.known	chr9	-	928	3	FSM	ENSG00000136908.18	ENST00000470181.1	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	910	junction_2	114.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGACTTCTCTTCCTCC	23	True	NA	NA	False	NA	NA	NA	127937818	127935340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127935781_127936552_127936656_127937433
transcript_141570.known	chr9	+	3474	10	FSM	ENSG00000148339.13	ENST00000373064.9	3474	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	22.4438943826986	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	6476	False	NA	12	True	AATAAA	-17	NA	128098303	128109245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128098726_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_141572.nic	chr9	-	1805	3	NIC	ENSG00000171169.9	novel	3398	2	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	59	False	NA	-1	True	ATTAAA	-24	NA	128067274	128061232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_128061827_128063373_128063901_128066590
transcript_141573.known	chr9	-	3398	2	FSM	ENSG00000171169.9	ENST00000373078.5	3398	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	13	True	NA	-1	True	ATTAAA	-24	NA	128067320	128061232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128063901_128066590
transcript_141576.known	chr9	-	1614	8	FSM	ENSG00000148334.16	ENST00000277462.9	1614	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	500.67179359133	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGTGTGGCTGAGTGC	NA	False	NA	-2	True	AATAAA	-41	NA	128128462	128120693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128128247
transcript_141579.known	chr9	-	1598	7	FSM	ENSG00000148334.16	ENST00000338961.11	1598	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	401.324231624367	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	6	True	NA	-1	True	AATAAA	-42	NA	128127729	128120692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128127438
transcript_141580.nic	chr9	-	1678	7	NIC	ENSG00000148334.16	novel	1598	7	NA	NA	-30	0	intron_retention	FALSE	canonical	0	0	junction_2	491.643078530214	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-8	True	NA	-1	True	AATAAA	-42	NA	128128425	128120692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128054
transcript_141581.nnic	chr9	-	1433	7	NNC	ENSG00000148334.16	novel	1598	7	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	485.156818862612	317	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	229	False	NA	-1	True	AATAAA	-42	NA	128128188	128120692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128062
transcript_141582.nic	chr9	-	1520	7	NIC	ENSG00000148334.16	novel	1614	8	NA	NA	2	0	intron_retention	FALSE	canonical	0	0	junction_2	488.382847319145	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	NA	False	NA	-1	True	AATAAA	-42	NA	128128460	128120692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128247
transcript_141585.known	chr9	+	2100	1	FSM	ENSG00000232850.3	ENST00000443493.3	2100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGCCTGACCATGCTA	NA	False	NA	NA	False	AATAAA	-22	NA	128128528	128130628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128128500_128130600
transcript_141586.nnic	chr9	+	817	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-721	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	4.81663783151692	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	427	False	NA	4	True	AATAAA	-15	NA	128150778	128153453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128151124_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_141587.nnic	chr9	+	610	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-715	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	4.17612260356422	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	433	False	NA	4	True	AATAAA	-15	NA	128150784	128153453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128150923_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_141588.nnic	chr9	+	592	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-704	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.57267069006199	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	-5	True	NA	4	True	AATAAA	-15	NA	128150795	128153453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128150923_128151644_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_141590.nnic	chr9	+	662	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-697	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	4.81663783151692	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	2	True	NA	4	True	AATAAA	-15	NA	128150802	128153453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128150993_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_141604.known	chr9	-	1996	4	FSM	ENSG00000148337.22	ENST00000634501.1	1996	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTATCACAAGGTCAAGAG	18	True	NA	NA	False	NA	NA	NA	128204222	128196846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128198368_128199919_128200185_128202763_128202937_128204185
transcript_141605.known	chr9	+	434	3	FSM	ENSG00000171159.5	ENST00000486420.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	13	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGGGCCACCCTTC	82	False	NA	NA	False	NA	NA	NA	128160459	128163737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128160487_128162003_128162116_128163442
transcript_141606.known	chr9	+	1570	3	FSM	ENSG00000171159.5	ENST00000492588.1	1570	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	10	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGTGTCCACATTAA	-8	True	NA	-20	True	NA	NA	NA	128160313	128163890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128160487_128162003_128162953_128163442
transcript_141611.known	chr9	+	704	2	FSM	ENSG00000171159.5	ENST00000372994.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	0	4643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	-5	True	NA	14	True	ATTAAA	-14	NA	128160264	128163924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128160487_128163442
transcript_141613.known	chr9	+	1373	7	FSM	ENSG00000175854.14	ENST00000652598.1	1373	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	104.169199969195	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTGAAACCCCATCT	857	False	NA	NA	False	NA	NA	NA	128276221	128316123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128313829_128313906_128314097_128314248_128315423
transcript_141621.known	chr9	+	466	5	FSM	ENSG00000175854.14	ENST00000495313.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	92.5337776166087	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCACAGCTCCCAGGGAC	14	True	NA	NA	False	NA	NA	NA	128275378	128288733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128275497_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_141623.known	chr9	+	906	5	FSM	ENSG00000175854.14	ENST00000608796.6	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	86.9522138878591	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTCTCCAATAGCCC	857	False	NA	18	True	AATAAA	-18	NA	128276221	128288990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938_128286034_128288651
transcript_141625.known	chr9	+	763	5	FSM	ENSG00000175854.14	ENST00000418976.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	24.963723680573	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTCTCCAATAGCC	-24	True	NA	17	True	AATAAA	-17	NA	128276243	128288989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_141632.known	chr9	-	428	2	FSM	ENSG00000167110.19	ENST00000490628.3	462	2	34	0	8	0	multi-exon	FALSE	canonical	3	75	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAGTTTAAATGAGA	45	False	NA	1	True	TATAAA	-18	NA	128275987	128273639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128273973_128275892
transcript_141633.known	chr9	-	5426	8	FSM	ENSG00000167112.10	ENST00000372890.6	5426	8	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	36.1657183486443	990	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGCTCATTGTCTTT	-16	True	NA	-26	True	ATTAAA	-7	NA	128322447	128305158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128317151_128317227_128321598_128321731_128322299
transcript_141637.known	chr9	+	1245	7	FSM	ENSG00000167113.11	ENST00000300452.8	1245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.1541289588513	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	0	True	NA	24	True	AATAAA	-18	NA	128322838	128334072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332152_128332283_128332849_128332944_128333473
transcript_141638.known	chr9	+	956	2	FSM	ENSG00000167113.11	ENST00000609948.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTCTACAGTGTT	54	False	NA	22	True	AATAAA	-27	NA	128322543	128323586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128322929_128323015
transcript_141639.known	chr9	+	781	3	FSM	ENSG00000167113.11	ENST00000608951.5	781	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTCTACAGTG	-16	True	NA	20	True	AATAAA	-25	NA	128322581	128323584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128322929_128323015_128323148_128323282
transcript_14164.known	chr1	+	1103	7	FSM	ENSG00000185842.16	ENST00000366850.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	43.9143737541847	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTCAGAAACTTTAT	-17	True	NA	8	True	AATAAA	-23	NA	224929660	224967923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224967679
transcript_141640.known	chr9	+	3229	13	FSM	ENSG00000167114.13	ENST00000300456.5	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	12.4621649626201	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCACTCTAAGTGTG	3	True	NA	7	True	NA	NA	NA	128340526	128361470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_141642.known	chr9	+	618	1	FSM	ENSG00000223551.1	ENST00000323496.5	618	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACACGTCTCACTAC	0	True	NA	17	True	AATAAA	-22	NA	128342152	128342770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128342200_128342800
transcript_141646.known	chr9	+	723	5	FSM	ENSG00000167118.11	ENST00000470840.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	210.979264383967	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCAGCCCCAGAGCCAG	-2	True	NA	NA	False	NA	NA	NA	128371360	128390090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128371416_128377994_128378107_128387815_128387898_128389260_128389310_128389665
transcript_141649.known	chr9	+	753	3	FSM	ENSG00000167118.11	ENST00000372847.1	753	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	274.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCAGTGCAGTCTCCTT	8	True	NA	NA	False	NA	NA	NA	128371370	128388411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128371416_128377994_128378107_128387815
transcript_14165.known	chr1	+	456	3	FSM	ENSG00000185842.16	ENST00000453375.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	2	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	NA	False	NA	16	True	AATAAA	-16	NA	224967439	224969829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224967584_224968758_224968875_224969633
transcript_141651.known	chr9	+	2595	5	FSM	ENSG00000167118.11	ENST00000372853.9	2595	5	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_4	49.3931928508373	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTCTTTAATGAAAAG	11	True	NA	17	True	AATAAA	-26	NA	128371373	128392016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260_128389310_128389665
transcript_141652.known	chr9	+	3045	3	FSM	ENSG00000167118.11	ENST00000372850.5	3045	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	46	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	-2	True	NA	18	True	AATAAA	-19	NA	128371360	128390734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128371416_128378035_128378107_128387815
transcript_141653.nic	chr9	+	1323	6	ISM	ENSG00000167123.20	ENST00000372838.9	2308	13	8074	0	-1814	0	3prime_fragment	FALSE	canonical	3	41	junction_2	4.33589667773576	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATGTATGTATATA	-3	True	NA	NA	False	AATAAA	-19	NA	128428930	128437347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_128429037_128431170_128431304_128434101_128434230_128434409_128434614_128435652_128435906_128436848
transcript_141656.known	chr9	+	3899	21	FSM	ENSG00000136811.17	ENST00000444119.7	3791	21	-76	-32	0	0	multi-exon	FALSE	canonical	3	40	junction_4	15.6501597435937	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCGTACTGTGCTA	822	False	NA	34	True	NA	NA	NA	128456005	128501292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_14166.known	chr1	-	3812	14	FSM	ENSG00000143815.15	ENST00000338179.6	3812	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	189.957298222335	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGCCTTTTTTTTT	NA	False	NA	-7	True	AATAAA	-20	NA	225428855	225401502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225428705
transcript_141662.nic	chr9	+	2333	17	ISM	ENSG00000136811.17	ENST00000372807.10	2780	21	-34	5489	-5	0	5prime_fragment	FALSE	canonical	3	40	junction_4	16.1516253052131	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATGTGTTTGCACAAAG	42	False	NA	6	True	AATAAA	-17	NA	128456123	128494836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_141667.known	chr9	+	2249	16	FSM	ENSG00000136811.17	ENST00000372814.7	2249	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	22.790836365132	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTTGCACAAAGTGA	873	False	NA	9	True	AATAAA	-20	NA	128456056	128494839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_141669.known	chr9	+	1054	6	FSM	ENSG00000136811.17	ENST00000469582.6	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	25.796123739818	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGCCCCGGGCTTCAGTT	19	False	NA	NA	False	NA	NA	NA	128456100	128469470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128456256_128457197_128457438_128459566_128459658_128460512_128460667_128460941_128461068_128469182
transcript_141675.nic	chr9	+	491	2	ISM	ENSG00000136811.17	ENST00000448249.8	2069	16	-33	34908	-5	-1448	5prime_fragment	FALSE	canonical	3	74	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGAAAAAAAAAGTTTA	42	False	NA	NA	False	AATAAA	-13	NA	128456123	128459925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_128456256_128459566
transcript_141677.known	chr9	+	3600	17	FSM	ENSG00000119392.16	ENST00000683288.1	3600	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	31.4010723343965	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATCTAGCAAGAGAT	16	True	NA	NA	False	NA	NA	NA	128504736	128542479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128504905_128507215_128507341_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_141678.known	chr9	+	3302	16	FSM	ENSG00000119392.16	ENST00000309971.9	3302	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	9.19903376568552	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGCTGATATATTGGT	-2	True	NA	32	True	AATAAA	-19	NA	128504718	128542288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_14168.known	chr1	-	3748	14	FSM	ENSG00000143815.15	ENST00000272163.9	3748	14	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	74.3348413535218	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGCCTTTTTTTTTT	22	True	NA	-6	True	AATAAA	-21	NA	225428038	225401501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_141681.known	chr9	+	2218	14	FSM	ENSG00000119392.16	ENST00000372770.4	2218	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	9.82027850025065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTCTGTCTTAAATAT	10	True	NA	NA	False	AATAAA	-17	NA	128504730	128539877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615
transcript_141682.known	chr9	-	822	4	FSM	ENSG00000228395.2	ENST00000434999.2	822	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCATCCTAATAATTTGC	-5	True	NA	NA	False	AGTAAA	-19	NA	128552410	128528656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128529001_128536826_128536956_128543378_128543685_128552367
transcript_141685.nnic	chr9	-	1596	9	NNC	ENSG00000119333.12	novel	1823	9	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_4	228.138526996209	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	-3	True	NA	-9	True	AAGAAA	-19	NA	128656704	128633652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635176_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_141687.known	chr9	-	1823	9	FSM	ENSG00000119333.12	ENST00000372715.7	1823	9	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_6	51.3710460765595	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	NA	False	NA	-9	True	AAGAAA	-19	NA	128656847	128633652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128635657_128635768_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_141701.nnic	chr9	-	1570	8	NIC	ENSG00000119333.12	novel	1823	9	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_4	258.612230403525	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCATTTATTTGTCTTT	-3	True	NA	-9	True	AAGAAA	-19	NA	128656704	128633652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_128633983_128634225_128634384_128634688_128634922_128635091_128635260_128636280_128636439_128636917_128637028_128640690_128640940_128656540
transcript_141708.known	chr9	+	7889	56	FSM	ENSG00000197694.18	ENST00000372731.8	7889	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	144.762337004057	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGCTTTTCTTCATTTG	NA	False	NA	7	True	AATAAA	-18	NA	128552557	128633662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128552697_128566737_128566978_128568771_128568898_128574674_128574816_128575198_128575346_128576822_128576957_128577128_128577274_128577351_128577507_128578109_128578246_128579636_128579739_128580921_128581060_128581781_128581893_128582478_128582557_128582693_128582850_128583076_128583282_128583787_128583970_128584281_128584526_128584720_128584844_128585747_128585966_128587605_128587699_128588808_128588944_128591476_128591626_128592982_128593043_128594174_128594374_128598399_128598505_128598962_128598987_128600079_128600116_128603542_128603591_128604325_128604418_128605033_128605179_128605295_128605478_128607603_128607704_128607851_128608050_128608129_128608277_128608873_128608978_128609121_128609285_128611713_128611846_128612108_128612247_128613380_128613486_128615631_128615841_128617639_128617761_128617986_128618109_128618870_128619004_128621157_128621257_128624327_128624488_128625102_128625180_128625768_128625979_128626390_128626688_128627385_128627499_128627924_128627943_128630320_128630376_128632126_128632324_128632430_128632485_128632571_128632719_128632807_128632956_128633208
transcript_141712.known	chr9	+	351	2	FSM	ENSG00000197694.18	ENST00000497216.2	351	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATTTGCTTGTAAAT	13	False	NA	5	True	AATAAA	-19	NA	128552602	128553337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128552697_128553080
transcript_141716.known	chr9	+	2927	8	FSM	ENSG00000119335.18	ENST00000322030.13	2927	8	0	0	0	0	multi-exon	FALSE	canonical	3	4802	junction_1	830.220255998002	2677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	-23	True	NA	19	True	AATAAA	-24	NA	128689221	128696396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128689656_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_141721.known	chr9	-	444	3	FSM	ENSG00000234705.3	ENST00000652876.2	463	3	16	3	16	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAGGTTCAATCTGGA	-7	True	NA	NA	False	AATAAA	-18	NA	128684477	128663133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128663401_128663511_128663577_128684365
transcript_141722.known	chr9	+	2850	8	FSM	ENSG00000119335.18	ENST00000372692.8	2850	8	0	0	0	0	multi-exon	FALSE	canonical	3	2179	junction_1	1670.65604857884	6233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATTCTCCTTGTTTTAT	4	False	NA	23	True	AATAAA	-28	NA	128683654	128696400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128684008_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_141723.known	chr9	+	235	2	ISM	ENSG00000119335.18	ENST00000686840.1	2733	9	0	12394	0	-7927	5prime_fragment	FALSE	canonical	1	5	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCCGAAGAAGGGAGGTAC	1	True	NA	8	True	NA	NA	NA	128683423	128683991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_128683447_128683779
transcript_141730.known	chr9	-	1146	5	FSM	ENSG00000160446.19	ENST00000372663.9	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	74.1834718788491	2973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-16	True	NA	-16	True	TATAAA	-22	NA	128724127	128720872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_141731.known	chr9	-	2536	4	FSM	ENSG00000160446.19	ENST00000467312.1	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	208.61500958038	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAAACCATATCAC	-16	True	NA	-23	True	TATAAA	-15	NA	128724127	128720879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128721481_128721650_128721818_128722008_128722087_128722437
transcript_141732.known	chr9	-	4293	16	FSM	ENSG00000160445.11	ENST00000291900.7	4293	16	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_15	30.3808419165032	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	1	True	NA	-1	True	AATACA	-21	NA	128771927	128729785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771580
transcript_141741.nnic	chr9	+	750	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5.5	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	NA	False	NA	11	True	AATAAA	-20	NA	128724423	128733194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724636_128730063_128730249_128732841
transcript_141744.nnic	chr9	+	710	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	-12	True	NA	11	True	AATAAA	-20	NA	128724438	128733194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724636_128730088_128730249_128732841
transcript_141745.nnic	chr9	+	639	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.5	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	-12	True	NA	11	True	AATAAA	-20	NA	128724438	128733194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724636_128730159_128730249_128732841
transcript_141747.known	chr9	+	544	2	FSM	ENSG00000223478.2	ENST00000443631.2	559	2	10	5	10	-5	multi-exon	FALSE	canonical	3	35	junction_1	0	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	-6	True	NA	11	True	AATAAA	-20	NA	128724444	128733194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128724636_128732841
transcript_141749.known	chr9	+	3855	12	FSM	ENSG00000107021.16	ENST00000372648.10	3855	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_8	17.5414503202798	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGCTGTGATGAGCT	-33	True	NA	19	True	AATAAA	-22	NA	128787252	128810430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
transcript_141752.nic	chr9	+	1083	2	ISM	ENSG00000107021.16	ENST00000475097.5	502	6	21	7800	21	-7800	5prime_fragment	FALSE	canonical	3	272	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAACTTCTTATATT	5	True	NA	NA	False	NA	NA	NA	128787290	128789330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_128787377_128788333
transcript_141755.known	chr9	-	1971	13	FSM	ENSG00000171097.14	ENST00000302586.8	1971	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_8	22.8587146036984	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-3	True	NA	-5	True	AATGAA	-15	NA	128881950	128832941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_141757.known	chr9	-	2089	13	FSM	ENSG00000171097.14	ENST00000462722.5	2089	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	45.3378521032187	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	22	True	NA	-5	True	AATGAA	-15	NA	128882036	128832941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836106_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_141761.known	chr9	-	4259	12	FSM	ENSG00000198917.13	ENST00000361256.10	4259	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_2	63.0100346199708	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTTGAATTATCCTGAA	6	True	NA	NA	False	AATAAA	-17	NA	128829794	128819650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_141776.known	chr9	+	1145	3	FSM	ENSG00000167136.7	ENST00000372642.5	1145	3	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	21.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTCTGGTGGCGTCCG	0	True	NA	26	True	ATTAAA	-17	NA	128818499	128822676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128819186_128820738_128820849_128822327
transcript_141778.known	chr9	-	6970	29	FSM	ENSG00000286112.1	ENST00000651925.1	6970	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	181.585463658975	560	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAATGTAACGCACTTG	16	True	NA	NA	False	AATAAA	-5	NA	128881931	128819662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744_128830006_128832290_128832476_128832595_128832868_128833226_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128846679_128846857_128847432_128847644_128881896
transcript_141779.known	chr9	-	898	3	FSM	ENSG00000198917.13	ENST00000467582.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	209.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAACGCTGCTAGGAGA	4978	False	NA	-39	True	NA	NA	NA	128824822	128822090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128822834_128824071_128824175_128824770
transcript_141781.known	chr9	+	5689	44	FSM	ENSG00000095319.14	ENST00000372577.2	5689	44	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_1	80.3864382116191	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	-6	True	NA	31	True	ATTAAA	-17	NA	128947698	129007096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_141784.known	chr9	+	2047	13	FSM	ENSG00000175287.19	ENST00000372592.8	2047	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.5514138607183	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	-7	True	NA	21	True	AATAAA	-18	NA	128920981	128942038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128937756_128937779_128940368_128940498_128940598_128940716_128941444_128941572_128941667
transcript_141789.known	chr9	-	1365	12	FSM	ENSG00000148341.18	ENST00000372559.5	1365	12	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_1	186.11286898009	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCTCCTGTCAGGGCC	-1	True	NA	-5	True	AATAAA	-21	NA	129028214	129008033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129008151_129008683_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_141807.known	chr9	-	2074	1	FSM	ENSG00000175283.8	ENST00000372586.4	2074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	801	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGTTTTGCTGATATA	6	True	NA	-7	True	AATAAA	-17	NA	128947603	128945529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128945500_128947600
transcript_141808.known	chr9	+	1599	12	FSM	ENSG00000175287.19	ENST00000308941.9	1599	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.2943589475734	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	358	False	NA	21	True	AATAAA	-18	NA	128921407	128942038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128940368_128940498_128940598_128940716_128941444_128941572_128941667
transcript_141809.known	chr9	+	381	6	FSM	ENSG00000095319.14	ENST00000491990.5	381	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_5	298.300921889289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTAGTAGTCACCATTT	2	True	NA	NA	False	NA	NA	NA	128947706	128958054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958013
transcript_141814.known	chr9	+	3610	16	FSM	ENSG00000148343.19	ENST00000684074.1	3610	16	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_13	26.2182294511959	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	-1	True	NA	28	True	AATAAA	-23	NA	129036625	129072082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
transcript_141819.known	chr9	+	631	4	FSM	ENSG00000148343.19	ENST00000474534.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.2673390921357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCACCATACCTGGCTAA	-6	True	NA	NA	False	NA	NA	NA	129036620	129047224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129047104
transcript_141820.known	chr9	-	411	1	FSM	ENSG00000287234.1	ENST00000670830.1	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACGTCTATGCTACTTAA	NA	False	NA	-5	True	AATAAA	-15	NA	129080765	129080354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129080400_129080800
transcript_141822.known	chr9	+	2169	8	FSM	ENSG00000167130.18	ENST00000372546.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	13.4786301005612	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	-6	True	NA	16	True	AATAAA	-17	NA	129081110	129090438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_141823.known	chr9	+	2037	7	FSM	ENSG00000167130.18	ENST00000406974.7	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	95.130465969402	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	-6	True	NA	13	True	AATAAA	-14	NA	129081110	129090435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_141824.nic	chr9	+	2325	7	NIC	ENSG00000167130.18	novel	2169	8	NA	NA	-60	0	intron_retention	FALSE	canonical	3	250	junction_4	13.29995822884	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	NA	False	NA	13	True	AATAAA	-14	NA	129081050	129090435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_129081208_129084667_129084769_129085022_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_141826.known	chr9	+	1932	6	FSM	ENSG00000167130.18	ENST00000327812.12	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	128.810869106609	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	17	True	NA	16	True	AATAAA	-17	NA	129081133	129090438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129081208_129084667_129084769_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_141831.nnic	chr9	+	1930	3	FSM	ENSG00000119383.21	ENST00000423100.5	988	3	6	-948	6	0	multi-exon	FALSE	canonical	3	58	junction_1	335.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	NA	False	NA	26	True	ATTAAA	-22	NA	129139387	129148946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129139650_129142444_129142553_129147386
transcript_141834.known	chr9	-	2768	14	FSM	ENSG00000095321.18	ENST00000318080.7	2768	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	8.60576385904431	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-64	True	NA	-1	True	AATAAA	-20	NA	129110793	129094793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
transcript_141835.known	chr9	+	2664	11	FSM	ENSG00000119383.21	ENST00000358994.9	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	196.123456016867	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGAGGTATGTCT	-2	True	NA	24	True	ATTAAA	-20	NA	129110949	129148944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_141837.known	chr9	+	2746	11	FSM	ENSG00000119383.21	ENST00000337738.6	2746	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	233.713071949346	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	10	True	NA	25	True	ATTAAA	-21	NA	129111412	129148945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_141842.known	chr9	+	2640	10	FSM	ENSG00000119383.21	ENST00000393370.7	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	61.9856614244151	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	12	True	NA	26	True	ATTAAA	-22	NA	129111414	129148946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_141844.known	chr9	+	2526	10	FSM	ENSG00000119383.21	ENST00000452489.6	2526	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	205.033330623747	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	104	False	NA	25	True	ATTAAA	-21	NA	129111687	129148945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111792_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_141846.known	chr9	+	2515	9	FSM	ENSG00000119383.21	ENST00000355007.7	2515	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	218.340867395456	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	11	True	NA	26	True	ATTAAA	-22	NA	129111413	129148946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_141847.known	chr9	+	2653	9	FSM	ENSG00000119383.21	ENST00000357197.8	2653	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	204.63439196528	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	-14	True	NA	25	True	ATTAAA	-21	NA	129111313	129148945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111632_129120512_129120611_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_14185.known	chr1	+	1596	4	FSM	ENSG00000143742.14	ENST00000366839.8	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	2961.36364985232	4287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTGTTGAAGTTT	3	True	NA	14	True	AATAAA	-18	NA	225777836	225790466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789239
transcript_141856.known	chr9	+	988	3	FSM	ENSG00000119383.21	ENST00000423100.5	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	335.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTCGGGTGGTGGAGA	NA	False	NA	NA	False	NA	NA	NA	129139381	129147998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129139650_129142444_129142553_129147386
transcript_141857.known	chr9	+	1153	3	FSM	ENSG00000119383.21	ENST00000414510.5	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	305	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAGAAACTCAGGGAG	1	True	NA	NA	False	NA	NA	NA	129140007	129148287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129140152_129142444_129142553_129147386
transcript_141858.known	chr9	+	618	3	FSM	ENSG00000119383.21	ENST00000435132.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	337	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTCTGGTTTTGAGAG	-5	True	NA	NA	False	NA	NA	NA	129141993	129147772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129142118_129142444_129142553_129147386
transcript_141859.known	chr9	+	857	3	FSM	ENSG00000119383.21	ENST00000432651.5	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	332	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGGAGAGGCCTTAG	159	False	NA	NA	False	NA	NA	NA	129141953	129148006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129142083_129142444_129142553_129147386
transcript_14186.known	chr1	+	1420	3	FSM	ENSG00000143742.14	ENST00000651761.1	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	3368	2083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGTTGAAGTTTTT	38	False	NA	16	True	AATAAA	-20	NA	225777871	225790468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225778013_225783299_225783369_225789258
transcript_141862.known	chr9	-	973	2	FSM	ENSG00000095321.18	ENST00000393384.3	973	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGATGCAGTGACTC	18	True	NA	NA	False	AATACA	-16	NA	129110711	129107333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129108078_129110482
transcript_141863.known	chr9	+	507	1	FSM	ENSG00000268707.1	ENST00000600965.1	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGTAATAACCATTTCAG	NA	False	NA	NA	False	AATAAA	-20	NA	129170433	129170940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129170400_129170900
transcript_141866.nnic	chr9	+	628	3	NNC	ENSG00000204055.5	novel	1324	3	NA	NA	7274	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1	82	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTGGGGTTGTTT	NA	False	NA	3	True	AATAAA	-13	NA	129208588	129214066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_129208705_129208868_129209237_129213922
transcript_14187.known	chr1	+	329	3	FSM	ENSG00000143742.14	ENST00000626563.2	329	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3412.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATTTCCCTAGTACGA	2845	False	NA	NA	False	NA	NA	NA	225777812	225789093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225778013_225783299_225783369_225789033
transcript_141875.known	chr9	+	974	5	FSM	ENSG00000233901.7	ENST00000657886.1	974	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.77263412660235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTATCCAGCCCAGTCT	-3	True	NA	NA	False	AATAAA	-22	NA	129333906	129359538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129355457_129355599_129359335
transcript_141876.known	chr9	+	903	5	FSM	ENSG00000233901.7	ENST00000657651.1	903	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.76085931090146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCCAGCCCAGTCTGGC	1057	False	NA	NA	False	AATAAA	-25	NA	129336866	129359541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129355457_129355599_129359335
transcript_141878.known	chr9	+	935	4	FSM	ENSG00000233901.7	ENST00000436710.6	935	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTTCAGCATTTCC	9	True	NA	9	True	ATTAAA	-14	NA	129333918	129347462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129334199_129338791_129338918_129341751_129342044_129347225
transcript_141880.known	chr9	+	902	4	FSM	ENSG00000233901.7	ENST00000654190.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	19	False	NA	24	True	ATTAAA	-29	NA	129333886	129347477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129347225
transcript_141881.known	chr9	+	751	4	FSM	ENSG00000233901.7	ENST00000660635.1	751	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.34209919681348	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTTCAGCATTTCC	905	False	NA	9	True	ATTAAA	-14	NA	129336714	129347462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336795_129338791_129338918_129341735_129342044_129347225
transcript_141883.known	chr9	+	1138	4	FSM	ENSG00000233901.7	ENST00000654148.1	1138	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	0	True	NA	24	True	ATTAAA	-29	NA	129336922	129347477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129341349_129342044_129347225
transcript_141884.known	chr9	+	2226	4	FSM	ENSG00000233901.7	ENST00000665063.2	2229	4	3	0	3	0	multi-exon	FALSE	canonical	2	4	junction_1	4.54606056566195	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTTTGTGTATTGAG	1069	False	NA	NA	False	AAGAAA	-44	NA	129336878	129348907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129347225
transcript_141885.known	chr9	+	640	4	FSM	ENSG00000233901.7	ENST00000444125.3	643	4	0	3	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	4.54606056566195	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTTTCAGCATTTC	0	True	NA	8	True	ATTAAA	-13	NA	129336922	129347461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129341831_129342044_129347225
transcript_141887.nnic	chr9	+	945	4	NNC	ENSG00000233901.7	novel	887	3	NA	NA	182	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.8878405775519	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCAGCATTTCCCC	182	False	NA	11	True	ATTAAA	-16	NA	129337104	129347464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_129337377_129338791_129338918_129341735_129342044_129347225
transcript_141891.known	chr9	+	430	3	FSM	ENSG00000233901.7	ENST00000667257.1	430	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTTCAGCATTTCC	-1	True	NA	9	True	ATTAAA	-14	NA	129336921	129347462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129347225
transcript_141892.known	chr9	+	1997	3	FSM	ENSG00000204054.14	ENST00000663000.1	1997	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTCTGAATCTCAGTTT	6	True	NA	13	True	CATAAA	-23	NA	129488702	129504545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129489300_129493418_129493596_129503322
transcript_141896.known	chr9	+	1562	4	FSM	ENSG00000148335.15	ENST00000611055.4	1562	4	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	233.51802214533	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	-19	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626322_129632649_129632866_129634053_129634307_129635207
transcript_141899.known	chr9	+	852	4	FSM	ENSG00000148335.15	ENST00000372480.1	852	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	243.410490050587	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCCTGGTGGGGGGA	149	False	NA	-85	True	GGGGCT	-20	NA	129626443	129635492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626542_129632649_129632866_129634053_129634307_129635207
transcript_14190.known	chr1	-	4109	25	FSM	ENSG00000196187.12	ENST00000366835.8	4109	25	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_17	40.5388830836108	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	6765	False	225882397	-12	True	AGTAAA	-17	NA	225882380	225845535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882303
transcript_141903.known	chr9	+	1072	3	FSM	ENSG00000148335.15	ENST00000482347.1	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	212.5	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTGCTGTGGGGTG	28	False	NA	NA	False	NA	NA	NA	129626199	129635930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626296_129634053_129634307_129635207
transcript_141905.known	chr9	+	1346	3	FSM	ENSG00000148335.15	ENST00000617943.4	1346	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	250.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	-19	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626322_129634053_129634307_129635207
transcript_141907.known	chr9	+	1123	2	FSM	ENSG00000148335.15	ENST00000459968.6	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCATGGTGGCGC	28	False	NA	NA	False	AATACA	-13	NA	129626199	129633676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626296_129632649
transcript_141908.known	chr9	+	741	4	FSM	ENSG00000148335.15	ENST00000372481.7	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	198.247320284538	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAAACTGAGGAAC	33	False	NA	NA	False	GGGGCT	-1	NA	129626204	129635473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626296_129632649_129632866_129634053_129634222_129635207
transcript_141909.known	chr9	-	1751	3	FSM	ENSG00000148344.11	ENST00000340607.5	1751	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCCAGCACCTCGTC	-1	True	NA	-20	True	ATTAAA	-16	NA	129753042	129738348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129739861_129748654_129748738_129752886
transcript_141910.known	chr9	-	2080	5	FSM	ENSG00000136827.12	ENST00000351698.5	2080	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	198.322968916866	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTACGTTTTTGAA	-10	True	NA	-2	True	AATAAA	-16	NA	129824136	129812941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
transcript_141915.known	chr9	-	1795	9	FSM	ENSG00000136819.15	ENST00000372447.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	78.4098805954964	1971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTGTTTGTATTATGT	-2	True	NA	NA	False	ATTAAA	-18	NA	129835275	129827289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
transcript_141916.known	chr9	-	472	3	FSM	ENSG00000136819.15	ENST00000495934.2	472	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTTTCATGACTAGTAA	1789	False	NA	NA	False	AATAAA	-15	NA	129833517	129831409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129831733_129831895_129831974_129833446
transcript_141920.known	chr9	+	6991	19	FSM	ENSG00000148358.20	ENST00000372410.7	6991	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	25.7293606605372	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAGATGCAGGGAG	11	False	NA	25	True	AATAAA	-21	NA	130053705	130140169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130110369_130110427_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_141921.known	chr9	+	6729	18	FSM	ENSG00000148358.20	ENST00000347136.11	6729	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	23.8166293566078	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	-11	True	NA	20	True	AATAAA	-16	NA	130053905	130140164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_141925.nic	chr9	+	2147	14	ISM	ENSG00000148358.20	ENST00000610997.1	2813	20	-49	27800	-30	17417	5prime_fragment	FALSE	canonical	3	74	junction_13	10.5986490151691	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGCTGACTCTATT	136	False	NA	8	True	AATAAA	-24	NA	130053875	130108323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495
transcript_141926.nnic	chr9	+	2016	13	NIC	ENSG00000148358.20	novel	6729	18	NA	NA	-30	17417	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	26.2534389281777	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGCTGACTCTATT	136	False	NA	8	True	AATAAA	-24	NA	130053875	130108323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130107495
transcript_141929.known	chr9	+	2833	17	FSM	ENSG00000148358.20	ENST00000493417.5	2833	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	29.1514766993029	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGGTGCTTCTTTGAC	4	True	NA	20	True	TTTAAA	-5	NA	130053920	130130024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077375_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639
transcript_141931.known	chr9	+	5164	8	FSM	ENSG00000107130.10	ENST00000372398.6	5164	8	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	29.5241167418732	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTGTGGGCCTGTTG	22	True	NA	13	True	ATTAAA	-25	NA	130172403	130237303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130172728_130200957_130200983_130217831_130217971_130219724_130219804_130222649_130222739_130223081_130223160_130226388_130226505_130232989
transcript_141938.known	chr9	+	1548	16	FSM	ENSG00000130707.18	ENST00000372393.7	1548	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	206.695868904587	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	27	False	NA	11	True	ATTAAA	-6	NA	130444987	130501255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130444996_130450271_130450334_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_141943.known	chr9	+	1532	15	FSM	ENSG00000130707.18	ENST00000352480.10	1532	15	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	61.0327780786685	2475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTGTGTGTGTGT	0	True	NA	30	True	ATTAAA	-25	NA	130444960	130501274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130444996_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_14195.known	chr1	+	1789	9	FSM	ENSG00000143819.13	ENST00000614058.4	1789	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	116.357141486889	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCGGCTGGAACTCAGT	287	False	NA	13	True	GATAAA	-13	NA	225810411	225845559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225810616_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_141972.known	chr9	+	3153	19	FSM	ENSG00000107164.16	ENST00000319725.10	3153	19	0	0	0	0	multi-exon	TRUE	canonical	3	520	junction_16	63.1792472569167	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	-18	True	NA	47	True	AATAAA	-31	NA	130579576	130638352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
transcript_141974.nnic	chr9	+	462	3	NNC	ENSG00000107164.16	novel	3153	19	NA	NA	40	14662	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	332.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGAGTTGAAGTATTTT	26	True	NA	NA	False	AATAAA	-28	NA	130579620	130596748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_130579765_130595482_130595589_130596536
transcript_141976.known	chr9	+	2228	2	FSM	ENSG00000107164.16	ENST00000467100.1	2228	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTGAAGTCTAGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	130578964	130582086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130579765_130580658
transcript_141987.known	chr9	+	2012	9	FSM	ENSG00000130713.17	ENST00000372358.10	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_7	16.2860177759942	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATCTAAAAATGGTGC	7	True	NA	14	True	NA	NA	NA	130693779	130704892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_141992.known	chr9	+	1957	9	FSM	ENSG00000130713.17	ENST00000372352.7	1957	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	66.4444081544866	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	7	True	NA	-17	True	GATAAA	-27	NA	130693779	130704861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702157_130702311_130703052_130703182_130703693
transcript_141995.known	chr9	+	1956	8	FSM	ENSG00000130713.17	ENST00000546165.6	1928	8	-20	-8	4	2	multi-exon	FALSE	canonical	2	2	junction_5	68.0039014487029	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAAAAATGGTGCCC	-13	True	NA	16	True	NA	NA	NA	130693759	130704894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130702142_130702311_130703052_130703182_130703693
transcript_141999.known	chr9	+	1885	8	FSM	ENSG00000130713.17	ENST00000372351.7	1885	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	67.4939150696459	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	13	True	NA	-17	True	GATAAA	-27	NA	130693785	130704861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_1420.known	chr1	+	1273	3	FSM	ENSG00000130939.20	ENST00000377153.5	1273	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	153.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTCTGTATGTCTCT	92	False	NA	NA	False	AATAAA	-19	NA	10033273	10073118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10033695_10072027_10072215_10072453
transcript_14201.known	chr1	-	348	2	FSM	ENSG00000242861.1	ENST00000424332.1	348	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTGCCTCGTGTGTGTG	NA	False	NA	-2	True	TATAAA	-19	NA	225846522	225840882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225841188_225846479
transcript_142018.known	chr9	-	449	3	FSM	ENSG00000130720.13	ENST00000486250.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	15.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	8359	False	NA	-2	True	AATAAA	-16	NA	130939139	130938016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_130938216_130938535_130938649_130939002
transcript_14202.known	chr1	+	1635	9	FSM	ENSG00000143819.13	ENST00000272167.10	1635	9	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_7	30.8828431333645	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCTGGAACTCAGTGACA	-1	True	NA	17	True	GATAAA	-17	NA	225810123	225845563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225810170_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_142020.known	chr9	-	385	3	FSM	ENSG00000130720.13	ENST00000463475.1	385	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	24	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	8212	False	NA	-2	True	AATAAA	-16	NA	130939286	130938016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_130938216_130938535_130938649_130939213
transcript_142023.known	chr9	+	3398	6	FSM	ENSG00000126878.13	ENST00000372314.3	3398	6	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	464.278106311293	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	-2	True	NA	14	True	AATAAA	-15	NA	131096529	131123145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131096661_131096779_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_142031.known	chr9	+	3374	6	FSM	ENSG00000126878.13	ENST00000247291.8	3374	6	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_5	35.9366108585659	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	-1	True	NA	13	True	AATAAA	-14	NA	131096530	131123144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_142032.known	chr9	+	671	4	FSM	ENSG00000126878.13	ENST00000372301.2	671	4	0	0	0	0	multi-exon	FALSE	canonical	3	1240	junction_3	46.1326589546085	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTTTCATCAATGTCT	0	True	NA	NA	False	NA	NA	NA	131111401	131120438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131111664_131114576_131114619_131117755_131117919_131120234
transcript_142034.nic	chr9	+	1875	11	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-174	18286	-21	1802	5prime_fragment	FALSE	canonical	3	159	junction_8	17.5396693241349	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTATTCTTTGTGATCTT	2583	False	NA	NA	False	AATACA	-19	NA	131125564	131141151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548
transcript_142036.nic	chr9	+	2487	8	ISM	ENSG00000126883.18	ENST00000483497.6	3275	11	7377	-1	160	0	3prime_fragment	FALSE	canonical	3	191	junction_3	20.0956894555494	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTATGTGGGTTTTTTC	3834	False	NA	10	True	ATTAAA	-18	NA	131197497	131233704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
transcript_142037.nic	chr9	+	971	7	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-174	26228	-21	0	5prime_fragment	FALSE	canonical	3	161	junction_5	16.8465294810402	213	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCCTGTGGAAGAAATT	2583	False	NA	3	True	NA	NA	NA	131125564	131133209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105
transcript_142038.nic	chr9	+	736	4	ISM	ENSG00000126883.18	ENST00000528406.1	393	5	-282	0	-163	0	intron_retention	FALSE	canonical	3	224	junction_1	7.84573486395988	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGTATGTGGGTTTTTTC	NA	False	NA	10	True	ATTAAA	-18	NA	131228011	131233704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131228332_131230629_131230770_131232283_131232309_131233453
transcript_142040.known	chr9	+	972	2	FSM	ENSG00000160539.6	ENST00000372261.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTCTGGAGGCTCTA	0	True	NA	NA	False	AATAAA	-22	NA	131289811	131291445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131290449_131291110
transcript_142041.known	chr9	+	2065	2	FSM	ENSG00000160539.6	ENST00000372264.4	2065	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCCGTGTGGCTTTTT	11	True	NA	22	True	AATACA	-18	NA	131289722	131309261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131290449_131307922
transcript_142044.known	chr9	+	3057	20	FSM	ENSG00000130714.19	ENST00000402686.8	3057	20	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	29.6243330394667	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	-48	True	NA	14	True	ATTAAA	-17	NA	131502917	131523799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_142046.known	chr9	+	3252	20	FSM	ENSG00000130714.19	ENST00000372228.9	3252	20	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_8	40.8625152475294	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	NA	False	NA	14	True	ATTAAA	-17	NA	131502788	131523799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510063_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_142050.known	chr9	+	2935	19	FSM	ENSG00000130714.19	ENST00000341012.13	2935	19	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	28.1166002545924	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTATTTATT	NA	False	NA	21	True	ATTAAA	-24	NA	131502894	131523806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_142055.known	chr9	+	2583	19	FSM	ENSG00000130714.19	ENST00000683712.1	2583	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	41.3309437780006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAGTGTGGCAAAGAA	1	True	NA	NA	False	AAAACA	-5	NA	131502966	131523106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131510416_131511336_131511473_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_142061.known	chr9	+	2461	18	FSM	ENSG00000130714.19	ENST00000677216.1	2461	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.5627156756944	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGCTAACTGCTGCAG	NA	False	NA	NA	False	NA	NA	NA	131502897	131523442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_142067.known	chr9	-	2051	7	FSM	ENSG00000130717.13	ENST00000372210.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	175.594624696265	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	20	True	NA	-4	True	AATAAA	-21	NA	131531179	131523800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531093
transcript_142069.known	chr9	-	2114	7	FSM	ENSG00000130717.13	ENST00000372211.7	2114	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	184.32617526789	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-1	True	NA	-4	True	AATAAA	-21	NA	131531200	131523800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531093
transcript_14207.known	chr1	-	1626	4	FSM	ENSG00000243709.1	ENST00000272134.5	1626	4	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_3	377.04936311075	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTAATTTTCTATT	-1	True	NA	-24	True	AATAAA	-38	NA	225889146	225886281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225887091_225887398_225887639_225887785_225888033_225888816
transcript_142073.known	chr9	+	5233	17	FSM	ENSG00000130714.19	ENST00000683392.1	5233	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	43.9315874400186	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGGAGGGCCACCTGA	-36	True	NA	NA	False	NA	NA	NA	131502929	131523569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131509023_131509742_131509809_131509902_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522201_131522225_131522931
transcript_142075.known	chr9	+	607	3	FSM	ENSG00000130714.19	ENST00000483472.2	607	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	48.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGGCACTTTGGGAGG	18	True	NA	NA	False	NA	NA	NA	131502983	131506812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131506113_131506221_131506402
transcript_142077.known	chr9	-	2162	7	FSM	ENSG00000130717.13	ENST00000372215.5	2162	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	39.4785455096253	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-8	True	NA	-4	True	AATAAA	-21	NA	131531263	131523800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_142079.known	chr9	-	1385	8	FSM	ENSG00000160563.14	ENST00000292035.10	1385	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	15.094261647854	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGGCTTTGTCTCCTGT	-1	True	NA	-7	True	AATAAA	-15	NA	132079867	131860111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_142080.known	chr9	-	1281	7	FSM	ENSG00000160563.14	ENST00000357028.6	1281	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	152.876493360563	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTGTCTCCTGTTTGTT	0	True	NA	-2	True	AATAAA	-20	NA	132079866	131860106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_142081.known	chr9	-	762	3	FSM	ENSG00000160563.14	ENST00000474263.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	210	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGAATTTTTAATTT	0	True	NA	NA	False	AATAAA	-15	NA	132079866	132073350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132073743_132077441_132077587_132079641
transcript_142082.nic	chr9	-	4200	10	ISM	ENSG00000107290.14	ENST00000224140.6	11101	26	-42	66268	-42	-44854	5prime_fragment	FALSE	canonical	3	48	junction_5	9.4097401598845	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAAATTAATTTCTCCTC	-4	True	NA	NA	False	NA	NA	NA	132355028	132327623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_132330500_132331051_132331140_132331276_132331449_132334607_132334728_132336295_132336516_132342689_132342800_132346260_132346472_132349251_132349436_132353648_132353756_132354916
transcript_142083.known	chr9	-	1780	10	FSM	ENSG00000125482.13	ENST00000612514.4	1780	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	45.0777106783386	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-21	True	NA	64	True	ATTAAA	-42	NA	132406851	132375547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132406789
transcript_142089.known	chr9	-	3143	11	FSM	ENSG00000125482.13	ENST00000334270.3	3143	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	22.1494920934996	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-10	True	NA	64	True	ATTAAA	-42	NA	132406840	132375547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132401454_132402829_132406789
transcript_14209.known	chr1	-	1680	7	FSM	ENSG00000143811.20	ENST00000343818.11	1680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	360.247445823315	2662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	27	True	NA	-3	True	AATAAA	-18	NA	225924250	225919877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225922384_225923700_225923772_225924043
transcript_142090.known	chr9	-	2814	20	FSM	ENSG00000125485.18	ENST00000372159.8	4159	20	-44	1389	-44	-1389	multi-exon	FALSE	canonical	3	52	junction_3	17.6063448648885	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTATCACTAATTATT	-15	True	NA	-25	True	AAAAAG	-5	NA	132670027	132594385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_142094.known	chr9	-	1333	7	FSM	ENSG00000125485.18	ENST00000480876.3	1333	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	36.3428886517783	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTGAGTCTGTG	1	False	NA	-1	True	AATAAA	-24	NA	132670401	132658080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132658359_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_142095.known	chr9	+	8612	5	FSM	ENSG00000125484.12	ENST00000372146.5	8612	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	11.8110118110177	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGCGTGTCTGTTTTATG	-30	True	NA	13	True	AATAAA	-18	NA	132670463	132694953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_132670956_132677976_132679804_132683562_132683694_132687238_132687328_132688880
transcript_142097.known	chr9	-	1579	13	FSM	ENSG00000165695.10	ENST00000298545.4	1579	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.03026742978125	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTACGTCCTGAAGGTG	-3	True	NA	NA	False	AATAAA	-16	NA	132878284	132725577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132725926_132727453_132727535_132792633_132792776_132814637_132814728_132823204_132823337_132826853_132827055_132828012_132828085_132828644_132828727_132854856_132854926_132863664_132863779_132866903_132866954_132875114_132875200_132878171
transcript_14210.known	chr1	-	1549	6	FSM	ENSG00000143811.20	ENST00000612039.4	1549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	468.426557744114	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAGGCTTAATC	NA	False	NA	-2	True	AATAAA	-19	NA	225924340	225919876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225922203_225922384_225923700_225923772_225924043
transcript_142103.nnic	chr9	-	768	4	NNC	ENSG00000165695.10	novel	1987	12	NA	NA	-66870	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	7.58653778449403	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTACGTCCTGAAGGTG	NA	False	NA	NA	False	AATAAA	-16	NA	132794468	132725577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_132725926_132727453_132727535_132792633_132792776_132794271
transcript_142106.nic	chr9	+	726	5	NIC	ENSG00000165698.16	novel	2536	4	NA	NA	290	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	3.39116499156263	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGACTTGGTTTC	-18	True	NA	4	True	AATAAA	-16	NA	132878316	132890030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_132878437_132883910_132884092_132887368_132887572_132888289_132888438_132889956
transcript_142107.known	chr9	+	894	5	FSM	ENSG00000165698.16	ENST00000350499.6	894	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3.56195171219375	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGAGGACCAGCAATCA	-16	True	NA	NA	False	NA	NA	NA	132878897	132890201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_132879015_132883910_132884092_132887368_132887572_132888289_132888438_132889956
transcript_142109.known	chr9	+	2242	4	FSM	ENSG00000165698.16	ENST00000356311.10	2242	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.2659863237109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGACTTGGTTTC	-16	True	NA	4	True	AATAAA	-16	NA	132878897	132890030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_132879015_132883910_132884092_132887368_132887572_132888289
transcript_14211.known	chr1	-	3149	5	FSM	ENSG00000143811.20	ENST00000478402.5	3149	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	423.197575016682	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-1	True	NA	-3	True	AATAAA	-18	NA	225924278	225919877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225923772_225924043
transcript_142112.known	chr9	-	3693	22	FSM	ENSG00000165699.15	ENST00000646391.1	3693	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	32.5817304788701	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGCTTTCCTGTTTCCAG	755	False	NA	NA	False	NA	NA	NA	132944633	132896166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132928766_132928953_132935032_132935096_132944542
transcript_142113.known	chr9	-	1787	12	FSM	ENSG00000165699.15	ENST00000647462.1	1787	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	31.2375595072173	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACGATCATGGCTCACTG	-1	True	NA	NA	False	NA	NA	NA	132944616	132910260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132910690_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_142114.known	chr9	-	2232	12	FSM	ENSG00000165699.15	ENST00000645150.1	2232	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	26.4002880024361	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	755	False	NA	-4	True	AATAAA	-19	NA	132944633	132909806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_142118.known	chr9	-	1717	10	FSM	ENSG00000165699.15	ENST00000403810.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	23.1420732769464	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCTTAGGTTGGATT	755	False	NA	NA	False	AGTAAA	-20	NA	132944633	132910998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_142119.known	chr9	-	5732	21	FSM	ENSG00000165699.15	ENST00000645901.1	5732	21	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	28.0925256963485	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGAACTTGGCTTTCCT	757	False	NA	NA	False	NA	NA	NA	132944631	132894848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132896755_132897183_132897346_132897422_132897611_132900714_132900838_132901588_132901700_132902604_132902788_132903650_132903818_132904410_132904455_132905580_132906140_132906730_132906836_132907300_132907371_132910570_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_142126.nic	chr9	-	355	2	ISM	ENSG00000165699.15	ENST00000646831.1	2005	3	-12	2703	-1	-2042	5prime_fragment	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGCACGTGTGTCTG	-13	True	NA	-5	True	ATTAAA	-18	NA	132944628	132943437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_132943707_132944542
transcript_142127.known	chr9	-	2005	3	FSM	ENSG00000165699.15	ENST00000646831.1	2005	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGTGCCAAACACTGTG	-1	True	NA	NA	False	AATAAA	-19	NA	132944616	132940734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132942427_132943467_132943707_132944542
transcript_142135.known	chr9	+	1389	1	FSM	ENSG00000196205.8	ENST00000436459.2	1389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2957	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATCCCTAATACCTGC	63	False	NA	NA	False	NA	NA	NA	133019485	133020874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133019500_133020900
transcript_142138.nic	chr9	+	2167	11	NIC	ENSG00000148308.18	novel	1999	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_1	142.636636247494	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	NA	False	NA	27	True	ATTAAA	-16	NA	133030673	133058503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_133030911_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_142141.known	chr9	+	1999	9	FSM	ENSG00000148308.18	ENST00000372099.10	1999	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	171.331139536863	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030674	133058501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133031165_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_142145.known	chr9	+	2098	11	FSM	ENSG00000148308.18	ENST00000372097.10	2098	11	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_8	52.4329095130148	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	-1	True	NA	27	True	ATTAAA	-16	NA	133030996	133058503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_142146.known	chr9	+	2110	12	FSM	ENSG00000148308.18	ENST00000372108.9	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	160.067599356136	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	6	True	NA	25	True	ATTAAA	-14	NA	133031003	133058501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133054943_133054965_133056011_133056095_133056765_133056909_133057813
transcript_142147.known	chr9	-	1935	7	FSM	ENSG00000148288.13	ENST00000372043.7	1935	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.94694069321861	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCTAGGGTGATTTTT	-10	True	NA	-25	True	AATAAA	-17	NA	133163919	133152952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133154243_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_142150.known	chr9	-	390	2	FSM	ENSG00000175164.16	ENST00000679909.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATGATTTATAATCCTT	-8	True	NA	NA	False	AATAAA	-26	NA	133275219	133233277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133233610_133275161
transcript_142151.known	chr9	-	4235	5	FSM	ENSG00000148296.7	ENST00000372022.6	4235	5	0	0	0	0	multi-exon	TRUE	canonical	3	337	junction_3	18.2397231338636	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGATTTAATTCAG	5	True	NA	NA	False	AATAAA	-18	NA	133336188	133328775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133332349_133332547_133332761_133333717_133333807_133334391_133334602_133336038
transcript_142153.nic	chr9	-	268	2	ISM	ENSG00000148296.7	ENST00000372022.6	4235	5	-70	5778	-70	-2748	5prime_fragment	FALSE	canonical	3	352	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAAACACAAAAGAAA	5644	False	NA	NA	False	AAAAAG	-5	NA	133336258	133334553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_133334602_133336038
transcript_142154.known	chr9	-	4044	5	FSM	ENSG00000148297.16	ENST00000343730.10	4044	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	113.19755960267	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAGAAATTA	-42	True	NA	NA	False	NA	NA	NA	133348131	133338311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347921
transcript_142156.known	chr9	-	3867	4	FSM	ENSG00000148297.16	ENST00000610888.4	3867	4	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_3	15.1070255914995	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-28	True	NA	-9	True	ATTAAA	-20	NA	133348117	133340904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347921
transcript_142158.known	chr9	+	476	1	FSM	ENSG00000230064.1	ENST00000439130.1	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGTGTTAAAAAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	133338989	133339465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133339000_133339500
transcript_14216.nic	chr1	-	1553	2	ISM	ENSG00000143768.13	ENST00000366820.10	2019	4	1509	0	390	0	3prime_fragment	FALSE	canonical	3	3127	junction_1	0	1941	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	1802	False	NA	-13	True	AATAAA	-14	NA	225939711	225936602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_225937805_225939360
transcript_14217.known	chr1	-	342	2	FSM	ENSG00000248322.1	ENST00000513672.1	342	2	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCCTCTTTAGTTTAT	3956	False	NA	-28	True	ATTAAA	-14	NA	225937557	225936410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225936578_225937382
transcript_14219.known	chr1	-	3987	7	FSM	ENSG00000143751.10	ENST00000272091.8	3987	7	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_1	13.3998341614945	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	-2	True	NA	-3	True	AATAAA	-23	NA	225999343	225982701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_14222.nnic	chr1	-	829	5	NNC	ENSG00000143751.10	novel	3987	7	NA	NA	-55	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	65.8117580679927	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACCATTTCTAATATT	3483	False	NA	-5	True	AATAAA	-21	NA	225999398	225982703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_225982927_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_142221.known	chr9	+	966	7	FSM	ENSG00000148303.17	ENST00000489392.1	966	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1968.05196972935	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTACATAAAAATAATTGA	636	False	NA	-17	True	ACTAAA	-29	NA	133348936	133351385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133349043_133349386_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_142224.known	chr9	+	887	8	FSM	ENSG00000148303.17	ENST00000323345.11	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_1	926.621204777258	201187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	7	True	NA	24	True	CATAAA	-31	NA	133348217	133351426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_142225.known	chr9	+	947	6	FSM	ENSG00000148303.17	ENST00000496554.5	947	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	2104.63655769826	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCACTGTCGCCTTCAC	7	True	NA	NA	False	NA	NA	NA	133348217	133350695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133348574_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596
transcript_142226.known	chr9	+	1164	7	FSM	ENSG00000148303.17	ENST00000463740.5	1164	7	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_1	972.771470250507	3957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	7	True	NA	24	True	CATAAA	-31	NA	133348217	133351426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350728_133351001_133351072_133351261
transcript_142227.known	chr9	+	680	7	FSM	ENSG00000148303.17	ENST00000315731.4	680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1971.06954187032	5217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	621	False	NA	24	True	CATAAA	-31	NA	133348921	133351426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133349043_133349550_133349612_133350000_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_142228.known	chr9	+	941	8	FSM	ENSG00000148303.17	ENST00000468019.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	1753.5977245628	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGTTTTCTGTACA	-1	True	NA	15	True	ACTAAA	-16	NA	133348251	133351372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133348389_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_142229.known	chr9	+	374	2	FSM	ENSG00000148303.17	ENST00000492798.1	374	2	0	0	0	0	multi-exon	FALSE	canonical	3	5201	junction_1	0	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCCTTCAGCCAGTG	1	False	NA	11	True	CATAAA	-18	NA	133350849	133351413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133351072_133351261
transcript_142230.known	chr9	-	1092	9	FSM	ENSG00000148290.10	ENST00000371974.8	1092	9	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_8	51.5156226304215	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTCCCAAAACTTGAT	-16	True	NA	46	True	CATAAA	-25	NA	133356487	133351757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356399
transcript_142233.known	chr9	-	991	8	FSM	ENSG00000148290.10	ENST00000615505.4	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	190.997275330496	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-14	True	NA	-1	True	TATAAA	-25	NA	133356485	133351804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356399
transcript_142244.known	chr9	+	833	6	FSM	ENSG00000148291.10	ENST00000371964.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_5	50.7290843599606	1737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	-19	True	NA	16	True	AATAAA	-16	NA	133356549	133361158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133356671_133356913_133357069_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_142247.nic	chr9	+	979	6	NIC	ENSG00000148291.10	novel	833	6	NA	NA	-32	0	combination_of_known_junctions	TRUE	canonical	3	34	junction_2	235.109846667467	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	5669	False	NA	16	True	AATAAA	-16	NA	133356517	133361158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_133356671_133356913_133357183_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_142267.known	chr9	-	2930	6	FSM	ENSG00000148248.14	ENST00000371989.8	2930	6	0	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_2	34.424409944108	1529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATCCTATAGCG	0	True	NA	-15	True	AATAAA	-18	NA	133376060	133361463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_142272.known	chr9	-	2326	8	FSM	ENSG00000148300.12	ENST00000371942.8	2326	8	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_5	17.0605165364298	816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGTGGAGGCTCAG	7	True	NA	-37	True	AATAAA	-20	NA	133418010	133406061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133412298_133412493_133412777_133412922_133414664_133415012_133417619
transcript_142276.known	chr9	+	2953	18	FSM	ENSG00000160323.19	ENST00000485925.5	2953	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.8663612802982	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGCGTTTTTTTCTTATAA	NA	False	NA	13	True	AATAAA	-18	NA	133414357	133459386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133414645_133423100_133423168_133424320_133424479_133425528_133425613_133425937_133426063_133426198_133426346_133432587_133432693_133439365_133439447_133440343_133440526_133444862_133445053_133445698_133445820_133448598_133448729_133449782_133449966_133454414_133454620_133455284_133455436_133456068_133456216_133456542_133456720_133458973
transcript_142278.known	chr9	+	689	6	FSM	ENSG00000160325.15	ENST00000474734.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	39.9879981994598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCGCGGAGACCCTGG	-10	True	NA	NA	False	NA	NA	NA	133459986	133468619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133460188_133463482_133463556_133465034_133465159_133465321_133465448_133467920_133468029_133468562
transcript_142279.known	chr9	+	2803	5	FSM	ENSG00000160325.15	ENST00000316948.9	2803	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	10.4880884817015	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	-19	True	NA	104	True	NA	NA	NA	133459977	133470848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468562
transcript_142284.nnic	chr9	+	711	4	NNC	ENSG00000160325.15	novel	2803	5	NA	NA	-5	1080	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	37.3660570869101	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTGTATTTCCTGCAA	-24	True	NA	NA	False	ATTAAA	-13	NA	133459972	133466933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_133460188_133463482_133463556_133465321_133465448_133466636
transcript_142285.known	chr9	+	2688	4	FSM	ENSG00000160325.15	ENST00000291722.11	2688	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	29.743346594939	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	NA	False	NA	104	True	NA	NA	NA	133459966	133470848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468562
transcript_142288.known	chr9	+	795	3	FSM	ENSG00000160325.15	ENST00000489519.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	13	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGGTTGCAGAGCAGA	1	True	NA	NA	False	NA	NA	NA	133459997	133465853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133460188_133463482_133463556_133465321
transcript_142290.known	chr9	-	2491	10	FSM	ENSG00000160326.14	ENST00000371899.9	2491	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	40.4557371291967	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGCGAGGAAAGAGTG	-1	True	NA	-15	True	AATAAA	-16	NA	133479099	133471093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_142295.known	chr9	-	2301	9	FSM	ENSG00000160326.14	ENST00000371897.8	2301	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.6920851810221	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTAGCGAGGAAAGAGT	2	True	NA	-16	True	AATAAA	-15	NA	133479096	133471094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133472177_133473104_133473251_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_1423.known	chr1	+	107	1	FSM	ENSG00000199562.1	ENST00000362692.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAACAA	3247	False	NA	NA	False	NA	NA	NA	10298965	10299072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10299000_10299100
transcript_142301.known	chr9	-	4691	27	FSM	ENSG00000160293.17	ENST00000406606.7	4691	27	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_12	21.9256746099314	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTCAGCCTTTCGTA	557	False	NA	-2	True	AATAAA	-19	NA	133992281	133761893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133764110_133768441_133768597_133770377_133770502_133771958_133772047_133774934_133775052_133776027_133776081_133777388_133777464_133778761_133778890_133779917_133779940_133780693_133780711_133783502_133783592_133784316_133784419_133785775_133785886_133788353_133788487_133789257_133789344_133791782_133791870_133795667_133795737_133796428_133796525_133797709_133797810_133806080_133806182_133807257_133807327_133809039_133809139_133812113_133812217_133834271_133834341_133861373_133861433_133939102_133939220_133992074
transcript_142302.known	chr9	-	5661	12	FSM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	37.3535708627481	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-4	True	NA	37	True	AATAAA	-26	NA	134068026	134030304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_134033706_134034700_134034830_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_142304.known	chr9	+	5682	3	FSM	ENSG00000235106.10	ENST00000603928.3	5682	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	-4	True	NA	NA	False	ATTAAA	-17	NA	134025480	134031587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_134025537_134025844_134026091_134026207
transcript_142308.known	chr9	+	3157	14	FSM	ENSG00000196363.10	ENST00000358625.4	3157	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	33.7596797427251	1496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGGTGAGAATTTC	-6	True	NA	23	True	AATAAA	-19	NA	134136081	134159968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_134136201_134139819_134139959_134140702_134140812_134141509_134141584_134141948_134142039_134142332_134142423_134142635_134142720_134148287_134148344_134151982_134152030_134154465_134154542_134155339_134155374_134155692_134155768_134156505_134156594_134157892
transcript_142312.known	chr9	+	2591	6	FSM	ENSG00000130558.20	ENST00000252854.8	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	67.5899400798669	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCTTCACTTGTCA	15	False	NA	11	True	AATAAA	-13	NA	135075519	135121178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
transcript_142314.known	chr9	+	2782	6	FSM	ENSG00000130558.20	ENST00000371793.8	2782	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	42.4951761968344	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTCACTTGTCATT	-5	True	NA	13	True	AATAAA	-15	NA	135087667	135121180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135088140_135090194_135090345_135095863_135096020_135098285_135098506_135106748_135106856_135119503
transcript_142318.known	chr9	+	1014	4	FSM	ENSG00000130558.20	ENST00000277415.15	1014	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	97.7036335045939	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTTCTGAGGACTGT	78	False	NA	13	True	AATAAA	-17	NA	135075421	135098107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135075803_135090194_135090345_135095863_135096020_135097780
transcript_142319.nic	chr9	+	716	4	NIC	ENSG00000130558.20	novel	1057	4	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	130.222885853447	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTTCTGAGGACTGT	-1	True	NA	13	True	AATAAA	-17	NA	135087644	135098107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_135087728_135090194_135090345_135095863_135096020_135097780
transcript_142320.known	chr9	+	1057	4	FSM	ENSG00000130558.20	ENST00000392991.8	1057	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	82.3825763671475	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGCATTCTAAACTGAC	1	True	NA	-29	True	AAGAAA	-43	NA	135087673	135098065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135088140_135090194_135090345_135095863_135096020_135097780
transcript_142321.known	chr9	+	568	2	FSM	ENSG00000130558.20	ENST00000371801.4	568	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGGTATTCTCCATT	108	False	NA	12	True	AATAGA	-9	NA	135075665	135076487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135075803_135076056
transcript_142322.nnic	chr9	-	766	3	Antisense	novelGene_ENSG00000235572.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGTCGTCCCCTCAAGT	NA	False	NA	NA	False	AATAAA	-32	NA	135366101	135350522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_-_135350917_135364019_135364275_135365984
transcript_142325.known	chr9	+	4951	4	FSM	ENSG00000196422.11	ENST00000356818.7	4951	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	18.7320284243028	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	-10	True	NA	16	True	AATAAA	-16	NA	135479781	135488892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135480023_135482682_135482816_135483949_135484083_135484448
transcript_142326.nnic	chr9	-	989	3	NNC	ENSG00000225361.4	novel	2285	3	NA	NA	-12	9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTAAATAAGTGAAGTCC	-6	True	NA	NA	False	AATAAA	-21	NA	135480750	135462717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_135463528_135464749_135464851_135480672
transcript_142327.known	chr9	-	643	2	FSM	ENSG00000225361.4	ENST00000455039.3	643	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCGTAATCTGAAACAAA	NA	False	NA	NA	False	CATAAA	-20	NA	135480777	135468171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_135468710_135480672
transcript_142328.known	chr9	+	854	4	FSM	ENSG00000122140.11	ENST00000472852.1	854	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	270.091753956976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGACGACTCTCCGCTGG	22	False	NA	NA	False	NA	NA	NA	135500714	135503955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135500754_135500997_135501124_135501698_135501974_135503541
transcript_142329.known	chr9	+	1458	4	FSM	ENSG00000122140.11	ENST00000241600.10	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	42.5910788780937	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGAGTTTGGGGCTCT	-11	True	NA	12	True	AATAAA	-22	NA	135500681	135504671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503541
transcript_142334.known	chr9	-	273	3	FSM	ENSG00000160345.13	ENST00000419770.1	273	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGGCCATCCATCTGCG	2232	False	NA	NA	False	NA	NA	NA	135499518	135495451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_135495570_135498584_135498664_135499442
transcript_142337.known	chr9	-	675	3	FSM	ENSG00000160345.13	ENST00000429260.7	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	6.5	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	1	True	NA	-1	True	ATTAAA	-19	NA	135499869	135495180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_135495616_135498584_135498664_135499708
transcript_142338.known	chr9	-	1278	3	FSM	ENSG00000160345.13	ENST00000371789.7	1278	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	96	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	1232	False	NA	-1	True	ATTAAA	-19	NA	135500518	135495180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_135495570_135498584_135498664_135499708
transcript_142340.nic	chr9	+	724	5	ISM	ENSG00000160349.10	ENST00000371781.4	787	7	1576	0	1576	0	3prime_fragment	FALSE	canonical	0	0	junction_3	0.82915619758885	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGCCTGTCTGTGGGGTC	1576	False	NA	NA	False	CATAAA	-23	NA	135523015	135526540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_135523303_135523879_135523991_135524829_135524932_135525131_135525159_135526343
transcript_142353.nnic	chr9	-	1539	6	NNC	ENSG00000204007.8	novel	1534	5	NA	NA	-9179	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.16619037896906	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTAGTCACTGTGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	135648719	135623647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_135624671_135626068_135626207_135631430_135631479_135639116_135639194_135639292_135639488_135648661
transcript_142369.nnic	chr9	-	1691	10	NNC	ENSG00000130560.9	novel	838	6	NA	NA	-22	8298	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	176.732133223079	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCCAGCTGTAACT	-27	True	NA	-16	True	AATAAA	-16	NA	135961234	135924670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_135925188_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_14237.known	chr1	+	1151	4	FSM	ENSG00000163041.13	ENST00000655399.1	1151	4	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	2841.32742843122	8691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACCTGCTTTTGGTCTT	34	False	NA	NA	False	ATTAAA	-11	NA	226062749	226071997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226062949_226064328_226064480_226065655_226065810_226071350
transcript_142373.known	chr9	-	1860	10	FSM	ENSG00000130560.9	ENST00000371756.4	1860	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_3	40.205337155687	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCTTCGTCTTTTC	-18	True	NA	-7	True	AATAAA	-14	NA	135961373	135932968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_142379.known	chr9	-	775	2	FSM	ENSG00000260193.1	ENST00000563018.1	775	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAACTCGAGTGCTGCTA	9460	False	NA	NA	False	NA	NA	NA	136109424	136108104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136108820_136109364
transcript_142380.known	chr9	-	1274	1	FSM	ENSG00000260193.1	ENST00000566567.1	1274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCTGCTCCCATAGT	9803	False	NA	-42	True	NA	NA	NA	136109081	136107807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136107800_136109100
transcript_142381.known	chr9	-	1981	3	FSM	ENSG00000238227.8	ENST00000557985.2	1981	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	112.5	1348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGGAGTGATTGCTTAA	350	False	NA	-35	True	ATTAAA	-18	NA	136118534	136114588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136114951_136115455_136117025_136118484
transcript_142382.nnic	chr9	-	648	2	Genic_Genomic	ENSG00000262075.3	novel	5021	1	NA	NA	-14	-4056	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGGTCTGTTGGCCCCGGG	4409	False	NA	NA	False	AATAAA	-14	NA	136327337	136326358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_136326616_136326946
transcript_142383.known	chr9	-	3096	3	FSM	ENSG00000213221.5	ENST00000371738.4	3096	3	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	22	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCGGGGGGGCGCTACG	-16	True	NA	NA	False	AATAAA	-18	NA	136363744	136359482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136362181_136362988_136363129_136363486
transcript_142384.known	chr9	-	4060	13	FSM	ENSG00000187796.15	ENST00000481053.5	4060	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	145.007159784919	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTGGGGCCTGTGGCCC	2	True	NA	-9	True	AATAAA	-16	NA	136373644	136361902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136362181_136362988_136364402_136364482_136365218_136366799_136366846_136367215_136367258_136367636_136367977_136369749_136369876_136370293_136370438_136370521_136370702_136370840_136371146_136371323_136371462_136371894_136372095_136373531
transcript_142385.known	chr9	-	1398	14	ISM	ENSG00000165684.6	ENST00000684778.1	4693	24	2	9215	2	-8	5prime_fragment	FALSE	canonical	3	42	junction_1	13.1491219586718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGTCGGTGGAATTTA	3	True	NA	NA	False	NA	NA	NA	136400168	136384785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298_136398438_136400133
transcript_142386.known	chr9	-	5010	23	FSM	ENSG00000165684.6	ENST00000298532.2	5010	23	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_11	20.6653780812176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACAGGCTGTTGTG	4817	False	NA	-9	True	AATAAA	-21	NA	136398797	136375576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136375801_136376348_136376482_136377542_136379300_136379836_136379865_136380739_136380851_136381321_136381393_136381823_136382074_136382252_136382337_136383185_136383669_136383952_136384033_136384719_136384815_136387484_136387580_136387741_136387849_136388443_136388592_136391941_136392107_136392521_136392595_136392672_136392778_136394248_136394331_136394799_136394879_136395297_136395424_136395602_136395771_136396976_136397024_136398298
transcript_142387.nic	chr9	-	833	3	ISM	ENSG00000165684.6	ENST00000682081.1	2257	10	-54	5405	-48	-3288	5prime_fragment	FALSE	canonical	3	43	junction_2	21.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACACAAGCACCCAAACAGC	-18	True	NA	NA	False	AAAAAG	-6	NA	136400224	136396420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_136397024_136398298_136398438_136400133
transcript_142389.nic	chr9	-	438	3	ISM	ENSG00000165684.6	ENST00000682081.1	2257	10	-54	5800	-48	-3683	5prime_fragment	FALSE	canonical	3	43	junction_2	21.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCCCCAGAAATAACCAC	-18	True	NA	3	True	ATTAAA	-19	NA	136400224	136396815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_136397024_136398298_136398438_136400133
transcript_142390.nic	chr9	-	1319	2	ISM	ENSG00000165684.6	ENST00000298532.2	5010	23	21354	0	17376	0	3prime_fragment	FALSE	canonical	3	140	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACACAGGCTGTTGTG	NA	False	NA	-9	True	AATAAA	-21	NA	136377443	136375576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_136375801_136376348
transcript_142393.known	chr9	-	626	6	FSM	ENSG00000165689.17	ENST00000417512.1	626	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	152.53773303678	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCAGTGTCGTGCCCTC	3952	False	NA	-8	True	AGTAAA	-14	NA	136407185	136402664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405117_136405203_136405904_136405979_136407144
transcript_142397.known	chr9	+	2086	13	FSM	ENSG00000165688.12	ENST00000371717.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_6	100.902145941281	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	-3	True	NA	27	True	AATAAA	-19	NA	136410657	136423761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_142406.known	chr9	+	416	3	FSM	ENSG00000165688.12	ENST00000619192.4	416	3	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_2	56	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGATGTTTGAGATTT	0	True	NA	NA	False	NA	NA	NA	136410643	136412606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136410740_136411996_136412200_136412489
transcript_142407.known	chr9	+	590	2	FSM	ENSG00000165688.12	ENST00000620412.4	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCGAGATATGAAGCGAAA	-3	True	NA	NA	False	NA	NA	NA	136410657	136412504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136410740_136411996
transcript_142417.known	chr9	+	1282	9	FSM	ENSG00000172889.16	ENST00000371698.3	1282	9	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	125.708927188963	1506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	12	True	NA	11	True	AATAAA	-13	NA	136665791	136672678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
transcript_142419.known	chr9	-	1546	6	FSM	ENSG00000169692.13	ENST00000371696.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	2	364	junction_5	41.725771412881	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-4	True	NA	-5	True	TATAAA	-19	NA	136687457	136673142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
transcript_142424.known	chr9	-	789	5	FSM	ENSG00000233016.8	ENST00000416970.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	77.3284391411077	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-2	True	NA	-18	True	ATTAAA	-14	NA	136728184	136724657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136724940_136725054_136725111_136726310_136726417_136727045_136727087_136727880
transcript_142427.known	chr9	-	1123	4	FSM	ENSG00000233016.8	ENST00000653276.1	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	4.71404520791032	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGCTGTTTCCTAG	4	True	NA	-99	True	GGGGCT	-14	NA	136728178	136724432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136725111_136726310_136726417_136727045_136727087_136727880
transcript_142429.known	chr9	-	1254	3	FSM	ENSG00000233016.8	ENST00000668354.1	1254	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	277	False	NA	-18	True	ATTAAA	-14	NA	136727905	136724657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136725111_136726310_136727087_136727880
transcript_142430.known	chr9	+	2358	5	FSM	ENSG00000165716.11	ENST00000371692.9	2358	5	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	53.5770473243907	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGTCTTAGGTTCCAG	14	True	NA	34	True	AATAAA	-40	NA	136712571	136724742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136712729_136717576_136717712_136721920_136722029_136722124_136722302_136722961
transcript_142431.known	chr9	+	2410	3	FSM	ENSG00000165716.11	ENST00000371691.5	2410	3	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	70.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGAGCCCCCATCGA	8327	False	NA	28	True	AATAAA	-28	NA	136720884	136724050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136722029_136722124_136722302_136722961
transcript_142433.known	chr9	-	615	5	FSM	ENSG00000187922.14	ENST00000527229.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.9474565306379	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTCAAGTGGAGACCA	5564	False	NA	NA	False	NA	NA	NA	136742959	136739460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136739554_136739949_136740049_136741251_136741362_136741880_136742021_136742786
transcript_142434.known	chr9	-	443	4	FSM	ENSG00000187922.14	ENST00000532006.1	443	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.09120616516523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTCAAGTGGAGACCA	5564	False	NA	NA	False	NA	NA	NA	136742959	136739460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136739554_136739949_136740049_136741880_136741959_136742786
transcript_142435.known	chr9	-	1780	4	FSM	ENSG00000187922.14	ENST00000341040.11	1780	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.24721912892465	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGCCCGGGCAACAT	0	True	NA	NA	False	AATAAA	-24	NA	136742940	136738166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136739554_136739949_136740049_136741880_136742021_136742786
transcript_142436.nnic	chr9	-	1688	3	NIC	ENSG00000187922.14	novel	1995	6	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	3	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	5532	False	NA	NA	False	AATAAA	-21	NA	136742991	136738169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_136739554_136739949_136740049_136742786
transcript_142437.nnic	chr9	-	429	4	NNC	ENSG00000177984.7	novel	767	7	NA	NA	1299	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.69967317119759	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCACCTCTTTGGAC	1354	False	NA	-2	True	AATAAA	-18	NA	136763165	136759633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_136759784_136761786_136761854_136762187_136762290_136763055
transcript_142439.known	chr9	-	767	7	FSM	ENSG00000177984.7	ENST00000316144.6	767	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.37436854187255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCACCTCTTTGGAC	1	True	NA	-2	True	AATAAA	-18	NA	136764518	136759633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136759784_136761786_136761854_136762187_136762290_136763356_136763468_136763712_136763784_136763869_136764010_136764392
transcript_142442.known	chr9	+	1556	9	FSM	ENSG00000213213.14	ENST00000481601.5	1556	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	6.30352084156148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCGGACGCTGGGGC	-2	True	NA	6	True	AATAAA	-13	NA	136800314	136807740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136800494_136802663_136802787_136804501_136804628_136804761_136804817_136805356_136805458_136806077_136806673_136806756_136806868_136806969_136807067_136807571
transcript_142445.known	chr9	+	1580	8	FSM	ENSG00000196642.19	ENST00000371671.9	1580	8	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_7	218.247846378789	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	8	True	NA	20	True	AATAAA	-15	NA	136807942	136834340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136833719
transcript_142448.known	chr9	+	735	6	FSM	ENSG00000272896.1	ENST00000456614.2	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.296944775949	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCCTGACCACCGGCT	23	True	NA	NA	False	NA	NA	NA	136791378	136800595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136799101_136799224_136800001_136800170_136800388
transcript_142452.known	chr9	+	683	4	FSM	ENSG00000244187.8	ENST00000483187.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	254.467199370676	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	16	True	NA	-19	True	AATAAA	-19	NA	136791371	136793256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136792818
transcript_142455.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000290079.9	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	67.2997028225237	4489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAACCTTTATTACCCT	-12	True	NA	42	True	AAAACA	-30	NA	136791343	136793317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791710_136791778_136791946_136792031_136792250_136792359_136792818
transcript_142456.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000465017.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	215.650759330914	1802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	12	True	NA	-19	True	AATAAA	-19	NA	136791367	136793256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791625_136791778_136791946_136792031_136792250_136792359_136792818
transcript_142457.known	chr9	+	644	2	FSM	ENSG00000213213.14	ENST00000609471.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTGTCATTTTCTCA	440	False	NA	6	True	ATTAAA	-20	NA	136799886	136800749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136800170_136800388
transcript_14246.known	chr1	+	607	4	FSM	ENSG00000163041.13	ENST00000666609.1	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	2830.0332546142	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTCTCTTCTTCC	639	False	NA	NA	False	NA	NA	NA	226063465	226071521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226063597_226064328_226064480_226065655_226065810_226071350
transcript_142470.known	chr9	+	577	3	FSM	ENSG00000054148.18	ENST00000247665.12	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	2758	junction_2	84	11695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTTCTGAACTCTGT	-5	True	NA	15	True	ATTAAA	-15	NA	136849408	136851024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136849591_136850012_136850138_136850754
transcript_142471.known	chr9	+	1316	3	FSM	ENSG00000054148.18	ENST00000492540.5	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	1294	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	310	False	NA	13	True	ATTAAA	-13	NA	136849090	136851022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136849591_136850012_136850561_136850754
transcript_142472.known	chr9	+	618	4	FSM	ENSG00000054148.18	ENST00000497413.1	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	1270.81006536076	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTCTGAACTCTGTCCT	12	True	NA	18	True	ATTAAA	-18	NA	136849425	136851027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136849591_136850012_136850138_136850505_136850561_136850754
transcript_142473.known	chr9	+	627	2	FSM	ENSG00000054148.18	ENST00000463215.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	2758	junction_1	0	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	42	False	NA	13	True	ATTAAA	-13	NA	136849778	136851022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136850138_136850754
transcript_142488.known	chr9	-	790	5	FSM	ENSG00000107223.13	ENST00000371649.5	790	5	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	886.712291276037	7481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-3	True	NA	-15	True	NA	NA	NA	136866285	136862118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_142489.known	chr9	-	662	5	FSM	ENSG00000107223.13	ENST00000224073.6	662	5	0	0	0	0	multi-exon	FALSE	canonical	3	2059	junction_1	198.308314248294	27946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-3	True	NA	-15	True	NA	NA	NA	136866308	136862118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_142494.known	chr9	+	2266	11	FSM	ENSG00000127191.18	ENST00000247668.7	2266	11	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_1	50.5787504788325	583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	9	True	NA	12	True	ATTAAA	-14	NA	136886515	136926607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136886542_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_142507.known	chr9	-	2362	9	FSM	ENSG00000159069.14	ENST00000325285.8	2362	9	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_8	72.455913319756	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	1	True	NA	-1	True	AATAAA	-16	NA	136944738	136940434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_142510.known	chr9	+	881	7	FSM	ENSG00000176919.13	ENST00000371634.7	881	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.74535599249993	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTCTTCTGTCCACT	-2	True	NA	NA	False	ATTAAA	-15	NA	136945242	136946975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136945459_136945633_136945771_136945928_136946000_136946084_136946193_136946464_136946567_136946650_136946690_136946767
transcript_142516.known	chr9	+	812	7	FSM	ENSG00000107317.13	ENST00000371625.8	812	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	33.0928827527746	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGGCTCCTGGCTGTCT	-1	True	NA	11	True	AATAAA	-20	NA	136977503	136981742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136977693_136978992_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_142517.known	chr9	+	754	6	FSM	ENSG00000107317.13	ENST00000492068.2	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	9.93176721434811	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTCAGGCTTCATCC	640	False	NA	-39	True	NA	NA	NA	136978811	136981692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_142518.nic	chr9	+	839	6	NIC	ENSG00000107317.13	novel	812	7	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	35.0941590581681	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGGCTCCTGGCTGTCT	707	False	NA	11	True	AATAAA	-20	NA	136978878	136981742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_136979133_136979222_136979402_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_142530.known	chr9	+	808	7	FSM	ENSG00000148362.11	ENST00000371620.4	808	7	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	72.8432487529825	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-6	True	NA	23	True	AATAAA	-18	NA	136992421	136993976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992563_136992639_136992701_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_142534.nic	chr9	+	891	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	-5	0	intron_retention	FALSE	canonical	3	236	junction_2	74.9015353647707	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-11	True	NA	23	True	AATAAA	-18	NA	136992416	136993976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_136992563_136992639_136992701_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_142536.known	chr9	+	958	6	FSM	ENSG00000148362.11	ENST00000493968.5	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_2	58.3218655394356	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGGCTCTGGTGGGGCT	63	False	NA	18	True	AATAAA	-13	NA	136992490	136993971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992563_136992639_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_142540.nic	chr9	+	748	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	154.086209636035	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-7	True	NA	23	True	AATAAA	-18	NA	136992420	136993976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_136992563_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_142541.nnic	chr9	+	708	6	NNC	ENSG00000148362.11	novel	808	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	188.382164760892	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	-7	True	NA	23	True	AATAAA	-18	NA	136992420	136993976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_136992563_136992924_136992975_136993092_136993244_136993342_136993412_136993579_136993665_136993765
transcript_142545.known	chr9	+	1077	5	FSM	ENSG00000148362.11	ENST00000498095.4	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	48.2804308182932	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTCTGACTCCTGGCA	35	False	NA	31	True	AATAAA	-26	NA	136992462	136993984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992563_136992639_136993244_136993342_136993412_136993579_136993665_136993765
transcript_142546.known	chr9	+	705	5	FSM	ENSG00000148362.11	ENST00000483807.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	171.938942651163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCGCCACCACCTCCAC	19	True	NA	-72	True	NA	NA	NA	136992446	136993881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992563_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_142548.known	chr9	+	744	5	FSM	ENSG00000148362.11	ENST00000467845.5	744	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	80.3181175078201	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGGTGGGGCTCTGA	212	False	NA	22	True	AATAAA	-17	NA	136992639	136993975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992701_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_142549.known	chr9	-	2187	8	FSM	ENSG00000107281.10	ENST00000371600.7	2187	8	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	19.6375317456452	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTTCTGCCTGTGT	9960	False	NA	-41	True	ATTAAA	-13	NA	137044092	137039469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926
transcript_142551.known	chr9	-	2102	9	FSM	ENSG00000054179.12	ENST00000355097.7	2102	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	1.93245310421754	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGAAAGGAGAGTGTCT	-9	True	NA	-7	True	AATAAA	-15	NA	137054061	137048106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137048861_137048940_137049076_137049869_137049990_137050283_137050539_137050901_137051130_137051210_137051371_137051509_137051661_137052230_137052349_137053880
transcript_142552.known	chr9	+	2671	13	FSM	ENSG00000177239.16	ENST00000682212.1	2671	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	90.8626481747771	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGGTGGAGATAAAAGTT	10	True	NA	-8	True	NA	NA	NA	137086984	137109151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107534_137107663_137108387
transcript_142553.known	chr9	+	2690	13	FSM	ENSG00000177239.16	ENST00000682117.1	2690	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	90.6084371837904	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGATGTCGCCTGTGTCTTT	-10	True	NA	26	True	GATAAA	-19	NA	137086964	137109185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108426
transcript_142554.known	chr9	+	2792	12	FSM	ENSG00000177239.16	ENST00000684229.1	2792	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	21.865101066039	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATAAAAGTTGATTTG	-18	True	NA	-2	True	NA	NA	NA	137086956	137109157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107663_137108387
transcript_142555.known	chr9	+	2526	12	FSM	ENSG00000177239.16	ENST00000684366.1	2526	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	92.7552542451512	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATAAAAGTTGATTTGCT	-24	True	NA	0	True	NA	NA	NA	137086950	137109159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106688_137106810_137107249_137107448_137107530_137107663_137108387
transcript_142556.known	chr9	-	1601	13	FSM	ENSG00000176978.14	ENST00000371579.7	1601	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	20.7337620534453	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-16	True	NA	-6	True	AATAAA	-17	NA	137114733	137110545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_142561.known	chr9	-	478	4	FSM	ENSG00000176978.14	ENST00000470766.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	75.2167239086864	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	6104	False	NA	-6	True	AATAAA	-17	NA	137112215	137110545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137112111
transcript_142564.known	chr9	-	2655	13	FSM	ENSG00000176248.9	ENST00000323927.3	2655	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	13.0647426304539	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	2	True	NA	-1	True	ATTAAA	-16	NA	137188560	137174783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
transcript_142572.known	chr9	+	723	3	FSM	ENSG00000176101.12	ENST00000464553.2	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	337	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	-10	True	NA	18	True	AATAAA	-20	NA	137188705	137190370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137188779_137189065_137189152_137189806
transcript_142573.known	chr9	+	863	3	FSM	ENSG00000176101.12	ENST00000322310.10	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_1	120.5	5170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	5	True	NA	14	True	AATAAA	-16	NA	137188675	137190366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137188779_137189065_137189266_137189806
transcript_142578.known	chr9	+	1170	2	FSM	ENSG00000176101.12	ENST00000459860.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	3	956	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	-11	True	NA	18	True	AATAAA	-20	NA	137188659	137190370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137189266_137189806
transcript_142580.known	chr9	-	1567	1	FSM	ENSG00000187713.7	ENST00000343666.6	1567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTGGTTGCCTGTAA	-2	True	NA	NA	False	AATAAA	-23	NA	137205648	137204081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137204100_137205600
transcript_142581.known	chr9	+	4817	14	FSM	ENSG00000188566.15	ENST00000684003.1	4817	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	17.1574677101504	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	-13	True	NA	4	True	AATAAA	-15	NA	137205699	137219361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_142582.known	chr9	+	1829	14	FSM	ENSG00000188566.15	ENST00000458322.2	1829	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	37.1238133115781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCATCCTCCTGGGAGCC	37	True	NA	NA	False	NA	NA	NA	137205749	137216444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215427_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_142583.known	chr9	+	762	2	FSM	ENSG00000197191.6	ENST00000650725.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTTTGCTGCAGGCTC	-1	True	NA	11	True	AATAAA	-25	NA	137225173	137226315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137225234_137225613
transcript_142584.known	chr9	+	1569	3	FSM	ENSG00000233198.4	ENST00000445101.4	1569	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGTCGGGTGCGGTTC	0	True	NA	NA	False	NA	NA	NA	137227501	137229640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137227862_137228151_137228342_137228621
transcript_142586.known	chr9	+	1563	4	FSM	ENSG00000188229.6	ENST00000340384.5	1563	4	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_1	40.2326567189723	5746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCGCTTTGCCCAT	0	True	NA	21	True	ATTAAA	-15	NA	137241286	137243707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137241418_137241720_137241830_137241910_137242022_137242495
transcript_142587.known	chr9	+	2035	3	FSM	ENSG00000188229.6	ENST00000604929.1	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	978	junction_1	20	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTTTCGCTTTGCCCA	1	True	NA	20	True	ATTAAA	-14	NA	137241287	137243706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137241418_137241720_137241830_137241910
transcript_142591.known	chr9	-	962	8	FSM	ENSG00000187609.16	ENST00000479452.5	962	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	7.21958786771044	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	27	True	NA	-3	True	AATAAA	-14	NA	137423155	137366144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_142594.nic	chr9	-	1169	7	ISM	ENSG00000187609.16	ENST00000340951.9	2781	22	-69	59249	-20	0	5prime_fragment	FALSE	canonical	3	50	junction_6	4.02768199119819	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-1	True	NA	-3	True	AATAAA	-14	NA	137423231	137366144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_142598.known	chr9	-	1585	3	FSM	ENSG00000187609.16	ENST00000465160.2	1585	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	22	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCGCAGTTGAGGTCAG	20	True	NA	-18	True	AATAAA	-21	NA	137423162	137391801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137393236_137395302_137395405_137423113
transcript_1426.known	chr1	+	2268	13	FSM	ENSG00000142657.21	ENST00000270776.13	2268	13	0	0	0	0	multi-exon	FALSE	canonical	3	1198	junction_9	123.89847994763	4072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTCTGATTTATTTCC	-4	True	NA	21	True	ATTAAA	-18	NA	10399063	10420511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10399126_10399628_10399705_10400392_10400573_10403070_10403137_10404160_10404280_10408070_10408141_10411417_10411553_10413061_10413252_10416986_10417118_10417375_10417510_10418825_10418926_10419416_10419540_10419629
transcript_14260.known	chr1	+	895	4	FSM	ENSG00000163041.13	ENST00000661429.1	895	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2854.03355893997	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTATAATAATTATAAATA	5	True	NA	NA	False	NA	NA	NA	226063493	226071752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226063682_226064328_226064480_226065655_226065810_226071350
transcript_142601.nnic	chr9	-	429	2	NNC	ENSG00000187609.16	novel	2781	22	NA	NA	4	-28020	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGTCCTGGAAGTTTTT	23	False	137423230	NA	False	TTTAAA	-1	NA	137423207	137419821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_137420157_137423113
transcript_142602.nic	chr9	-	2050	9	ISM	ENSG00000165802.23	ENST00000265663.12	2981	15	5394	-7	492	0	3prime_fragment	TRUE	canonical	3	513	junction_1	42.485291572496	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCGCGTGGGTCTGTCC	5413	False	NA	-28	True	ATTAAA	-18	NA	137453940	137448224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137452820_137453055_137453181_137453730
transcript_142603.known	chr9	-	2888	9	FSM	ENSG00000165802.23	ENST00000371482.5	2888	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	190.905572207833	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCGCGTGGGTCTGTCC	4697	False	NA	-28	True	ATTAAA	-18	NA	137454656	137448224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137449492_137449598_137449675_137449922_137450026_137450175_137450256_137452364_137452436_137452552_137452587_137452735_137453821_137454390_137454444_137454537
transcript_142606.known	chr9	+	582	2	FSM	ENSG00000182154.8	ENST00000371443.6	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	1822	junction_1	0	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTGTTTGTTTTTTGGC	-26	True	NA	16	True	ATTAAA	-16	NA	137551878	137552555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137551979_137552073
transcript_142610.known	chr9	-	2302	9	FSM	ENSG00000148399.13	ENST00000277540.7	2302	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_7	46.0970443737991	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGACAACCAGTTACAG	-30	True	NA	NA	False	AATAAA	-19	NA	137578925	137554443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
transcript_142612.nnic	chr9	-	1497	8	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_7	89.0003439571432	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	296	False	NA	-13	True	ATTAAA	-18	NA	137578599	137554903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137578509
transcript_142618.known	chr9	-	1395	6	FSM	ENSG00000165724.6	ENST00000298585.3	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_5	39.5049364004044	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTCTCGGACATTCT	-7	True	NA	-23	True	AGTAAA	-13	NA	137590512	137582080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137582687_137582982_137583164_137586966_137587108_137587716_137587824_137588658_137588719_137590212
transcript_142626.known	chr9	-	1409	3	FSM	ENSG00000203993.7	ENST00000371417.4	1480	3	65	6	18	0	multi-exon	FALSE	canonical	2	112	junction_2	26	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	19	True	NA	0	True	AATAAA	-18	NA	137618813	137615331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137616200_137617933_137618192_137618530
transcript_142627.known	chr9	+	1556	8	FSM	ENSG00000197070.14	ENST00000371421.9	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_7	18.087090897733	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	0	True	NA	16	True	AATAAA	-17	NA	137605685	137615360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_142628.known	chr9	+	882	3	FSM	ENSG00000197070.14	ENST00000461627.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTGAACAGCATCCCAG	10	True	NA	NA	False	NA	NA	NA	137605695	137613741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137605836_137612895_137613511_137613614
transcript_142629.known	chr9	-	1825	2	FSM	ENSG00000203993.7	ENST00000496793.3	1841	2	0	16	0	-16	multi-exon	FALSE	canonical	3	164	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTACAGGAGTTG	9855	False	NA	-16	True	AATAAA	-2	NA	137618906	137615347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137616200_137617933
transcript_142637.known	chr9	+	2707	16	FSM	ENSG00000181090.21	ENST00000462484.5	2707	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_15	139.810760991023	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGCCTTTTGAAGCCA	-17	True	NA	17	True	AATAAA	-17	NA	137618991	137784393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137784105
transcript_142639.known	chr9	+	2679	16	FSM	ENSG00000181090.21	ENST00000371394.6	2679	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_15	169.846388114542	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTGCATATATGGTCACT	-16	True	NA	NA	False	AATAAA	-21	NA	137618992	137792256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137619050_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137790847_137790971_137792054
transcript_142642.nic	chr9	+	1114	3	ISM	ENSG00000181090.21	ENST00000629335.2	3600	10	-19	47138	1	569	5prime_fragment	FALSE	canonical	3	361	junction_1	50.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGATGCTGCTAA	-15	True	NA	NA	False	NA	NA	NA	137618993	137717619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_137619050_137710966_137711031_137716625
transcript_142645.known	chr9	+	818	4	FSM	ENSG00000181090.21	ENST00000460486.3	818	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	232.561103081893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAAAGAGGAGATCAAC	1420	False	NA	NA	False	AGTAAA	-38	NA	137667349	137728400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137667495_137710966_137711031_137716625_137717183_137728348
transcript_142649.known	chrM	+	954	1	FSM	ENSG00000211459.2	ENST00000389680.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1291	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGTAGCTTAACACAA	-4	True	NA	NA	False	NA	NA	NA	647	1601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_600_1600
transcript_142651.known	chrM	+	1559	1	FSM	ENSG00000210082.2	ENST00000387347.2	1559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3902	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGGCAGAGCCCGG	-2	True	NA	NA	False	NA	NA	NA	1670	3229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_1700_3200
transcript_142652.known	chrM	+	956	1	FSM	ENSG00000198888.2	ENST00000361390.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2208	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	-4	True	NA	NA	False	NA	NA	NA	3306	4262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_3300_4300
transcript_142653.known	chrM	+	1042	1	FSM	ENSG00000198763.3	ENST00000361453.3	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3701	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTTAGGTTAAATACA	17	True	NA	NA	False	NA	NA	NA	4469	5511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_4500_5500
transcript_142654.known	chrM	+	1542	1	FSM	ENSG00000198804.2	ENST00000361624.2	1542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	559	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGGAAGGAATCGAA	1	True	NA	NA	False	CATAAA	-8	NA	5903	7445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_5900_7400
transcript_142655.known	chrM	+	684	1	FSM	ENSG00000198712.1	ENST00000361739.1	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13903	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCTCTACCCCCTCTA	-2	True	NA	NA	False	NA	NA	NA	7585	8269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_7600_8300
transcript_142656.known	chrM	+	681	1	FSM	ENSG00000198899.2	ENST00000361899.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6022	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	21	False	NA	NA	False	NA	NA	NA	8526	9207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_8500_9200
transcript_142657.known	chrM	+	784	1	FSM	ENSG00000198938.2	ENST00000362079.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4909	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTTAGTATAAATAGT	1	True	NA	NA	False	NA	NA	NA	9206	9990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_9200_10000
transcript_142658.known	chrM	+	207	1	FSM	ENSG00000228253.1	ENST00000361851.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCGCCGCAGTACTG	2	True	NA	NA	False	AATGAA	-42	NA	8365	8572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_8400_8600
transcript_142659.known	chrM	+	346	1	FSM	ENSG00000198840.2	ENST00000361227.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1653	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTATATAGTTTAAACAAA	-4	True	NA	NA	False	AAAAAG	-19	NA	10058	10404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_10100_10400
transcript_142660.known	chrM	+	297	1	FSM	ENSG00000212907.2	ENST00000361335.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATCGTCCCAACAATT	-2	True	NA	NA	False	NA	NA	NA	10469	10766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_10500_10800
transcript_142661.known	chrM	+	1378	1	FSM	ENSG00000198886.2	ENST00000361381.2	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4581	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAGTTTAACCAAA	-4	True	NA	NA	False	NA	NA	NA	10759	12137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_10800_12100
transcript_142662.known	chrM	+	1812	1	FSM	ENSG00000198786.2	ENST00000361567.2	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	523	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCCCCGAGCAATCT	-2	True	NA	NA	False	NA	NA	NA	12336	14148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_12300_14100
transcript_142663.known	chrM	-	525	1	FSM	ENSG00000198695.2	ENST00000361681.2	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGATTAGGAGTAGGG	-1	True	NA	NA	False	NA	NA	NA	14673	14148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_-_14100_14700
transcript_142664.known	chrM	+	1141	1	FSM	ENSG00000198727.2	ENST00000361789.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTGTAGTATAAACTAA	-7	True	NA	NA	False	AAAACA	-19	NA	14746	15887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_14700_15900
transcript_142673.nnic	chrX	+	2276	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	29	0	intron_retention	FALSE	canonical	3	83	junction_7	73.2270720542113	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	4863	False	NA	15	True	AATAAA	-21	NA	281222	303356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
transcript_142676.nnic	chrX	+	1967	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	101.962778322608	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	5002	False	NA	15	True	AATAAA	-21	NA	281361	303356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299459_302828
transcript_14268.known	chr1	+	600	3	FSM	ENSG00000163041.13	ENST00000656829.1	600	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2922.5	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATGGTGTTTGTAGCAT	67	False	NA	NA	False	AGTAAA	-18	NA	226062782	226071846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226062812_226065734_226065810_226071350
transcript_142689.known	chrX	+	5318	7	FSM	ENSG00000182378.15	ENST00000381657.8	5318	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	13.5574907543968	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	-13	True	NA	15	True	AATAAA	-21	NA	281380	303356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_142693.nic	chrX	+	1482	6	ISM	ENSG00000182378.15	ENST00000381657.8	5318	7	-158	9872	29	1845	5prime_fragment	FALSE	canonical	3	270	junction_1	14.3024473430249	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTGGTTCATGCCTGTC	4863	False	NA	4	True	AATAAA	-15	NA	281222	293484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034
transcript_1427.known	chr1	+	506	2	FSM	ENSG00000142657.21	ENST00000496718.1	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	1411	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTGCCACCTGGCCCTT	1816	False	NA	NA	False	NA	NA	NA	10418811	10419808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10418926_10419416
transcript_14270.known	chr1	-	1264	3	FSM	ENSG00000272562.2	ENST00000658138.1	1264	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGTATGAGAATAATAA	598	False	NA	NA	False	NA	NA	NA	226061898	226045560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226046591_226060989_226061082_226061756
transcript_142701.nnic	chrX	+	970	3	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	135	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	5006	False	NA	15	True	AATAAA	-21	NA	281365	303356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_281685_284166_284287_302825
transcript_142703.nnic	chrX	+	1129	3	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	29	0	intron_retention	FALSE	canonical	0	0	junction_2	135	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	4863	False	NA	15	True	AATAAA	-21	NA	281222	303356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_281685_284166_284315_302837
transcript_142709.known	chrX	+	587	5	FSM	ENSG00000182378.15	ENST00000430923.7	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	118.937746321342	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGACATGCTGTGTCCTC	-7	True	NA	NA	False	NA	NA	NA	276352	291629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_276395_284166_284315_288732_288870_290647_290777_291498
transcript_142711.known	chrX	-	1907	10	FSM	ENSG00000178605.13	ENST00000326153.9	1907	10	0	0	0	0	multi-exon	TRUE	canonical	3	294	junction_7	32.2765824984272	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATTTCCAGTTCCTCC	4	True	NA	-5	True	ATTAAA	-22	NA	318819	304749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
transcript_142715.known	chrX	-	1090	5	FSM	ENSG00000167393.18	ENST00000479438.6	1090	5	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	27.7432424204526	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGTTGATTGCCGCTGTG	NA	False	NA	-8	True	GATAAA	-20	NA	341711	334234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_334518_338603_338711_338777_338897_340764_340941_341306
transcript_142721.nnic	chrX	+	1036	7	NNC	ENSG00000185291.12	novel	1476	10	NA	NA	18702	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.763762615825973	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGTCCCGGTCTCTG	NA	False	NA	NA	False	GATAAA	-24	NA	1355497	1382689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_1355789_1356220_1356337_1358860_1358888_1365137_1365253_1378658_1378765_1381022_1381105_1382390
transcript_142722.known	chrX	+	1541	12	FSM	ENSG00000185291.12	ENST00000331035.10	1541	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.616575453011388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGTCCCGGTCTCTG	-1	True	NA	NA	False	GATAAA	-24	NA	1336784	1382689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_1336927_1341727_1341830_1345315_1345435_1348430_1348546_1352099_1352233_1352321_1352507_1356220_1356337_1358860_1358888_1365137_1365253_1378658_1378765_1381022_1381105_1382390
transcript_14273.known	chr1	+	559	4	FSM	ENSG00000163041.13	ENST00000667897.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	2707.92959041897	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGGTAGTTCTGAACG	42	False	NA	NA	False	NA	NA	NA	226062757	226071542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226062812_226064328_226064480_226065655_226065818_226071350
transcript_142749.known	chrX	-	1451	4	FSM	ENSG00000169100.14	ENST00000381401.11	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	4519	junction_3	194.732865456473	43842	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGGCCACGCACC	-3	True	NA	30	True	AATAAA	-18	NA	1392113	1386151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_1386760_1387278_1387420_1389240_1389728_1391898
transcript_142753.known	chrX	-	2065	13	FSM	ENSG00000169093.16	ENST00000381317.9	2065	13	0	0	0	0	multi-exon	TRUE	canonical	1	190	junction_11	118.025303313409	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCCTCCATAGGG	-19	True	NA	-14	True	AATAAA	-16	NA	1452909	1403138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_142754.known	chrX	-	2035	12	FSM	ENSG00000169093.16	ENST00000381333.9	2035	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	175.616882036433	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	-1	True	NA	-16	True	AATAAA	-14	NA	1452929	1403140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1442185_1442318_1452747
transcript_142756.known	chrX	+	1330	9	FSM	ENSG00000196433.13	ENST00000381241.9	1330	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	4.47213595499958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	-2	True	NA	2	True	AATAAA	-15	NA	1615058	1643081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1632703_1632788_1633149_1633291_1636437_1636561_1642802
transcript_142757.known	chrX	+	1087	8	FSM	ENSG00000196433.13	ENST00000381229.9	1087	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.49943307086389	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAACTAACGTCAAAGC	0	True	NA	-52	True	NA	NA	NA	1615163	1643027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1633149_1633291_1636437_1636561_1642802
transcript_142758.known	chrX	+	989	7	FSM	ENSG00000196433.13	ENST00000381233.8	989	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.82970843102535	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	11	False	NA	2	True	AATAAA	-15	NA	1615174	1643081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1636437_1636561_1642802
transcript_142761.nic	chrX	+	1033	6	ISM	ENSG00000196433.13	ENST00000381241.9	1330	9	-4	10052	-4	-3434	5prime_fragment	FALSE	canonical	0	0	junction_5	4.56070170039655	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGGCGGAAGGACCCAA	-6	True	NA	7	True	AATAAA	-17	NA	1615054	1633029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1632703
transcript_142764.nnic	chrX	-	1341	7	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	20	-1254	combination_of_known_splicesites	FALSE	canonical	3	29	junction_5	121.703761468393	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	5	True	NA	46	True	CATAAA	-23	NA	2500940	2220759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2392353_2392475_2425196_2425305_2500816
transcript_142766.known	chrX	-	2579	7	FSM	ENSG00000169084.15	ENST00000334651.11	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	75.9334503949932	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCATCCTCCGGGAATG	-31	True	NA	NA	False	AATAAA	-30	NA	2500976	2219505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
transcript_14277.known	chr1	-	3584	8	FSM	ENSG00000182827.9	ENST00000366812.6	3584	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_5	38.3011695883655	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGATGTTTCATTAAT	-24	True	NA	-4	True	ATTAAA	-15	NA	226186741	226144678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226146822_226152334_226152620_226154646_226154834_226159183_226159359_226161530_226161690_226164788_226164930_226165858_226166001_226186389
transcript_142773.nnic	chrX	-	1356	2	FSM	ENSG00000289007.1	ENST00000686824.1	1371	2	12	3	-4	0	multi-exon	FALSE	canonical	3	37	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCAGGTGCACCTCTTT	NA	False	NA	-3	True	AATAAA	-19	NA	2609195	2566026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2567293_2609105
transcript_142775.known	chrX	+	984	10	FSM	ENSG00000223773.8	ENST00000430562.7	1030	10	46	0	2	0	multi-exon	FALSE	canonical	3	67	junction_7	13.2925301588784	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGAGTATTGGTGTCAAC	22	True	NA	15	True	AATAAA	-16	NA	2609393	2638329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2609482_2610995_2611039_2612149_2612219_2615815_2615970_2618739_2618785_2619428_2619498_2622689_2622735_2623384_2623454_2626596_2626643_2637973
transcript_142791.known	chrX	+	842	9	FSM	ENSG00000002586.20	ENST00000482405.7	842	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	495.727180513637	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGACTTCCATGTTTTAA	15	False	NA	NA	False	TTTAAA	-23	NA	2691309	2733672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2733356
transcript_142792.known	chrX	+	1089	10	FSM	ENSG00000002586.20	ENST00000624481.4	1089	10	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_8	400.412287523747	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTAGAAACCAAG	18	False	NA	-7	True	NA	NA	NA	2691312	2741290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738202_2738257_2740778
transcript_142807.nnic	chrX	+	315	3	NNC	ENSG00000124343.14	novel	2943	11	NA	NA	7012	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	2.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATTTCCTTTTATTCT	2644	False	NA	14	True	ACTAAA	-26	NA	2801546	2814447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_2801661_2811335_2811453_2814363
transcript_142811.known	chrX	+	2313	10	FSM	ENSG00000124343.14	ENST00000381174.10	2313	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.67723670663315	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTGATTATTGAATA	-7	True	NA	NA	False	AATAAA	-17	NA	2752051	2815927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2752336_2770549_2770592_2774715_2774740_2782065_2782129_2789643_2789707_2794534_2794604_2797309_2797361_2808184_2808221_2811335_2811453_2814363
transcript_142813.known	chrX	+	3192	11	FSM	ENSG00000056998.20	ENST00000398806.8	3192	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_9	58.182901268328	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	-5	True	NA	28	True	ATTAAA	-14	NA	2828929	2882818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_14282.known	chr1	+	1965	2	FSM	ENSG00000185155.12	ENST00000366810.6	1965	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTTCTATTTAAATGA	1	True	NA	43	True	ATTAAA	-22	NA	226223663	226227060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226224075_226225506
transcript_142820.nic	chrX	+	3094	10	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_2	91.9864455930302	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	72	False	NA	28	True	ATTAAA	-14	NA	2828885	2882818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_142824.nic	chrX	+	3022	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_8	102.022975353594	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	72	False	NA	27	True	ATTAAA	-13	NA	2828885	2882817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_142827.known	chrX	+	2852	8	FSM	ENSG00000056998.20	ENST00000381161.5	2852	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	127.804218894945	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	2	True	NA	27	True	ATTAAA	-13	NA	2828913	2882817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_142836.known	chrX	-	663	4	FSM	ENSG00000006756.16	ENST00000494870.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	4.10960933531265	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATCCC	19	True	NA	NA	False	NA	NA	NA	2929279	2920380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2920724_2921902_2922025_2925615_2925766_2929231
transcript_142837.known	chrX	-	2219	11	FSM	ENSG00000157399.17	ENST00000381134.9	2219	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	19.6063765137773	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGCAACAGAGCAAGACC	1	True	NA	NA	False	NA	NA	NA	2964341	2934520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_142838.known	chrX	-	2678	11	FSM	ENSG00000157399.17	ENST00000684364.1	2678	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	18.055747007532	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAACAAACAAACATTAAT	-3	True	NA	NA	False	AATAAA	-4	NA	2964288	2934044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958424_2960377_2960469_2964223
transcript_14284.known	chr1	-	3186	15	FSM	ENSG00000183814.16	ENST00000366808.6	3186	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	33.3390131215423	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	NA	False	NA	-1	True	AATAAA	-18	NA	226309869	226231156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309625
transcript_142841.known	chrX	-	1294	9	FSM	ENSG00000157399.17	ENST00000682364.1	1294	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	23.3666428910958	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGCAGTGAAAAGCTG	-3	True	NA	-33	True	NA	NA	NA	2964288	2934831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_142842.known	chrX	-	1317	9	FSM	ENSG00000157399.17	ENST00000684738.1	1317	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	22.7362595868362	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGCAGTGAAAAGCTG	22	True	NA	-33	True	NA	NA	NA	2964263	2934831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
transcript_142846.known	chrX	-	1338	6	FSM	ENSG00000157399.17	ENST00000682745.1	1338	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.3666428910958	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGACCTCCCAGACTCAA	-3	True	NA	NA	False	NA	NA	NA	2964288	2951737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_142847.nic	chrX	-	1303	6	NIC	ENSG00000157399.17	novel	1407	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	25.5734237050888	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTAATTTTTTACCA	3866	False	NA	NA	False	AATAAA	-35	NA	2964377	2951909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_2952561_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
transcript_142856.known	chrX	-	973	5	FSM	ENSG00000157399.17	ENST00000683071.1	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	20.0670750235305	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTAATTTTTTACCA	28	True	NA	NA	False	AATAAA	-35	NA	2964257	2951909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2960377_2960421_2964223
transcript_142860.known	chrX	-	1335	5	FSM	ENSG00000157399.17	ENST00000683854.1	1335	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26.0288301696407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAACATCAACTTAATGAAA	-3	True	NA	NA	False	AAAAAG	-19	NA	2964288	2952322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_142864.known	chrX	-	2158	12	FSM	ENSG00000157399.17	ENST00000545496.6	2158	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	18.5904089730464	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCGATTCCTAAATTTT	1	True	NA	-12	True	AATAAA	-21	NA	2964284	2934810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958436_2959602_2959889_2960377_2960421_2964223
transcript_142865.nnic	chrX	-	355	2	Antisense	novelGene_ENSG00000062096.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTACATCAGTATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	3048055	3043483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_3043676_3047892
transcript_142867.known	chrX	+	452	1	FSM	ENSG00000182888.5	ENST00000329806.5	452	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGTATGAGTTAATAAAA	9177	False	NA	NA	False	NA	NA	NA	3717148	3717600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_3717100_3717600
transcript_14287.known	chr1	-	2909	14	FSM	ENSG00000183814.16	ENST00000460719.5	2909	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	30.0797755877314	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCATTTAATTCAA	-15	True	NA	7	True	AATAAA	-26	NA	226309172	226231148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
transcript_142870.known	chrX	-	1306	3	FSM	ENSG00000285756.2	ENST00000490920.2	1306	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	34	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	401	False	NA	-4	True	ATTAAA	-25	NA	3843508	3817527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_3817779_3828505_3829393_3843340
transcript_142872.known	chrX	-	1271	4	FSM	ENSG00000285756.2	ENST00000475317.5	1271	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.2807651352991	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	494	False	NA	-4	True	ATTAAA	-25	NA	3843415	3817527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_3817779_3818441_3818501_3828505_3829388_3843336
transcript_142877.nnic	chrX	+	2038	4	Antisense	novelGene_ENSG00000236120.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGATTCATGGCTCATTC	NA	False	NA	NA	False	AATAAA	-38	NA	5632299	5658710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_5632379_5645596_5645752_5650261_5650410_5657054
transcript_142881.known	chrX	-	5858	6	FSM	ENSG00000146938.16	ENST00000381095.8	5858	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	19.8836616346185	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTGTGCAAATAATTAT	-8	True	NA	94	True	AATAAA	-20	NA	6228867	5890041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_5893667_5903076_5903867_5909053_5909240_6029279_6029433_6150994_6151772_6228540
transcript_142883.nnic	chrX	-	2059	4	NNC	ENSG00000146938.16	novel	894	2	NA	NA	-9	-43114	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	69.7758315369059	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTCTTTCCTTAAT	-17	True	NA	NA	False	AATAAA	-23	NA	6228876	5935318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_5936112_6029279_6029433_6150994_6151772_6228540
transcript_142884.known	chrX	-	610	1	FSM	ENSG00000237730.1	ENST00000437297.1	610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCGGCTGCTGACCAA	68	False	NA	NA	False	NA	NA	NA	6422701	6422091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_6422100_6422700
transcript_142885.known	chrX	-	995	3	FSM	ENSG00000169059.13	ENST00000381089.7	995	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCTGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	6535118	6533617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_6534204_6534395_6534644_6534957
transcript_142886.known	chrX	-	1334	5	FSM	ENSG00000130021.15	ENST00000424830.6	1334	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	51.895929512824	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATCTATCGTCTGCAT	-16	True	NA	NA	False	NA	NA	NA	7148158	7049762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7116965_7117035_7148052
transcript_142890.known	chrX	-	2103	4	FSM	ENSG00000130021.15	ENST00000381077.10	2103	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	10.6144555520604	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	-11	True	NA	-4	True	AATAAA	-18	NA	7148153	7048919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7148052
transcript_142891.known	chrX	+	455	1	FSM	ENSG00000237490.3	ENST00000463344.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGTGTATGAGTTAATAAGA	NA	False	NA	NA	False	NA	NA	NA	6989328	6989783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_6989300_6989800
transcript_142895.known	chrX	+	967	3	FSM	ENSG00000182583.13	ENST00000381059.7	967	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCTGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	7842261	7844143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_7842335_7843057_7843306_7843497
transcript_14290.known	chr1	-	3978	23	FSM	ENSG00000143799.14	ENST00000366794.10	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_17	275.455389287636	2491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-15	True	NA	-7	True	ATTAAA	-20	NA	226408093	226360690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_142900.nic	chrX	-	881	7	NIC	ENSG00000006757.12	novel	2752	7	NA	NA	-11	1389	combination_of_known_junctions	FALSE	canonical	3	53	junction_6	47.0652620187	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTTAGATAGTTTTTG	NA	False	NA	-1	True	AATAAA	-26	NA	7927750	7900659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927670
transcript_142901.known	chrX	-	2752	7	FSM	ENSG00000006757.12	ENST00000444736.5	2752	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_6	60.1758995685888	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTACGTGTACAGG	NA	False	NA	NA	False	NA	NA	NA	7927739	7898762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927685
transcript_142905.known	chrX	-	2559	6	FSM	ENSG00000006757.12	ENST00000537427.5	2559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	71.6530529705469	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTACGTGTACAGG	NA	False	NA	NA	False	NA	NA	NA	7927739	7898762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7927685
transcript_142910.known	chrX	+	907	2	FSM	ENSG00000285679.2	ENST00000655333.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTATGTGTGTGTCTGT	1417	False	NA	NA	False	ATTAAA	-13	NA	7928945	8018494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_7929414_8018055
transcript_142911.known	chrX	-	6265	14	FSM	ENSG00000011201.12	ENST00000262648.8	6265	14	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	36.9020773617078	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGGAGTCGACTCATTTA	13	True	NA	-2	True	AATAAA	-17	NA	8732137	8528873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_8533054_8534318_8534461_8535590_8535812_8536770_8536943_8539663_8539759_8553951_8554099_8568231_8568377_8570498_8570705_8585266_8585397_8587793_8587979_8597033_8597257_8623607_8623671_8699697_8699746_8731829
transcript_142912.known	chrX	-	704	3	FSM	ENSG00000011201.12	ENST00000488294.1	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	123.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGATTTTCGCCCATA	NA	False	NA	0	True	AATAAA	-15	NA	8570650	8565805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_8566213_8568231_8568377_8570498
transcript_142916.known	chrX	-	1645	9	FSM	ENSG00000101850.13	ENST00000467482.6	1645	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	25.5085769889267	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTTAATGATGGGG	1	True	NA	49	True	AATAAA	-15	NA	9765847	9725345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9765567
transcript_142917.nic	chrX	-	1711	9	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-343	-67	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	51.6283291904745	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCAGCCTGACTTGGAT	NA	False	NA	-18	True	AATAAA	-15	NA	9766532	9725412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9766119
transcript_142920.nic	chrX	-	1373	9	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-19	-67	combination_of_known_junctions	FALSE	canonical	3	31	junction_8	42.4394789671127	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCAGCCTGACTTGGAT	-12	False	NA	-18	True	AATAAA	-15	NA	9786316	9725412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9786241
transcript_142924.nnic	chrX	-	1280	8	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-19	-67	combination_of_known_splicesites	FALSE	canonical	3	18	junction_5	60.7063860406996	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCAGCCTGACTTGGAT	-12	False	NA	-18	True	AATAAA	-15	NA	9786316	9725412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9759331_9759427_9760716_9760827_9786241
transcript_142930.known	chrX	+	6951	23	NIC	ENSG00000047644.20	novel	6949	24	NA	NA	0	0	intron_retention	FALSE	canonical	3	102	junction_13	16.2191219662278	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGGAAATGTGTGGCT	0	True	NA	14	True	ATTAAA	-18	NA	10015253	10144474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_10015859_10063444_10063555_10067286_10067491_10078798_10078876_10079724_10079805_10090770_10090901_10094131_10094282_10098505_10098580_10109777_10110021_10116417_10116508_10117123_10117690_10122618_10122740_10124264_10124340_10125023_10125111_10126113_10126307_10127987_10128162_10128556_10128709_10129955_10130122_10134431_10134597_10136632_10136726_10138708_10138937_10139412_10139541_10141434
transcript_142931.known	chrX	+	531	2	FSM	ENSG00000047644.20	ENST00000466248.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAGATTTCATTTAATT	179	False	NA	NA	False	AGTAAA	-21	NA	10015794	10016862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_10015859_10016395
transcript_142932.known	chrX	+	6759	13	FSM	ENSG00000073464.13	ENST00000380833.9	6759	13	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	8.0221048775659	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGAGATACTGATTTCA	8	True	NA	15	True	AATAAA	-32	NA	10156974	10237660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_10157101_10158288_10158552_10185021_10185177_10187514_10187615_10194910_10195099_10197938_10198062_10206357_10206565_10206695_10206777_10208044_10208591_10212466_10212654_10213680_10214080_10220660_10220878_10233493
transcript_142934.known	chrX	-	6168	10	FSM	ENSG00000101871.17	ENST00000317552.9	6168	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	17.3205080756888	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTCTGCCTGTCT	-11	True	NA	-6	True	AATAAA	-22	NA	10620585	10445555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
transcript_142941.nic	chrX	-	2094	2	FSM	ENSG00000101871.17	ENST00000693721.1	1992	2	0	-102	0	102	multi-exon	FALSE	canonical	3	141	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCACTCTCTAAGTATG	-17	True	NA	NA	False	NA	NA	NA	10620591	10565811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_10567604_10620289
transcript_142942.nnic	chrX	-	791	2	NNC	ENSG00000101871.17	novel	6168	10	NA	NA	-43	-16900	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCACATTCCATTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	10620634	10583581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_10584028_10620289
transcript_142943.known	chrX	-	1071	4	FSM	ENSG00000234129.9	ENST00000433747.6	1071	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAAAAAAATTAAAATTT	25	False	NA	NA	False	TTTAAA	-20	NA	11111114	10969890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_10970539_11055935_11056037_11106900_11106991_11110882
transcript_142946.known	chrX	+	2312	7	FSM	ENSG00000004961.15	ENST00000380762.5	2312	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	35.2156057578013	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGGAATAATTTTACA	20	True	NA	20	True	AATAAA	-27	NA	11111331	11123086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11111519_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_142949.known	chrX	+	1000	7	FSM	ENSG00000004961.15	ENST00000380763.7	1000	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	138.057657037437	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTGCACTCATGATGT	30	True	NA	29	True	ATTAAA	-15	NA	11111341	11121879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11111424_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_142951.known	chrX	+	2277	7	FSM	ENSG00000004961.15	ENST00000321143.8	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	122.987465485986	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	-11	True	NA	12	True	AATAAA	-19	NA	11111300	11123078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11111461_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_142955.known	chrX	+	2286	13	FSM	ENSG00000005302.19	ENST00000312196.10	2286	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	11.7434970184448	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTTGTCCTCTTTA	9	True	NA	27	True	AATAAA	-40	NA	11758236	11775772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_142956.known	chrX	+	2329	13	FSM	ENSG00000005302.19	ENST00000398527.7	2329	13	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	19.006395122578	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCCTGTCTTGTTT	240	False	NA	-19	True	NA	NA	NA	11758555	11775726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11758774_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_142957.known	chrX	+	2230	13	FSM	ENSG00000005302.19	ENST00000649602.1	2230	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	15.7347810068438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTTTGAAAGAACCA	907	False	NA	-9	True	AATAAA	-4	NA	11759603	11775736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11759713_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_142961.known	chrX	+	1715	10	FSM	ENSG00000005302.19	ENST00000647857.1	1715	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	12.8706767882522	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTAGCATTTAATTTT	22	True	NA	5	True	AATAAA	-23	NA	11758249	11769102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572
transcript_142963.known	chrX	+	2256	12	FSM	ENSG00000005302.19	ENST00000361672.6	2256	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	21.0080661407757	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACCAGGAGAGAGAGT	84	False	NA	2	True	AATAAA	-15	NA	11758158	11775747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_142965.known	chrX	+	2296	12	FSM	ENSG00000005302.19	ENST00000649785.1	2296	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	20.5924643201551	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGAGAGAGTTTTCAC	936	False	NA	8	True	AATAAA	-21	NA	11759632	11775753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768574_11768683_11772155_11772256_11772620_11772706_11774979
transcript_142966.known	chrX	+	3480	9	FSM	ENSG00000005302.19	ENST00000337339.7	3480	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	13.3082446250435	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTACTTTTTATTT	-25	True	NA	3	True	AATAAA	-19	NA	11758202	11767977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466
transcript_142967.known	chrX	+	2469	7	FSM	ENSG00000101911.13	ENST00000380668.10	2469	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	9.53356643071673	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATGTATCATTGT	17	True	NA	9	True	AATAAA	-20	NA	12791411	12824222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
transcript_142968.known	chrX	+	763	4	FSM	ENSG00000101911.13	ENST00000489404.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	11.6714276000077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATATATTGGTTTATTTG	93	False	NA	NA	False	AATACA	-20	NA	12791487	12810369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021
transcript_14297.nic	chr1	-	862	5	ISM	ENSG00000143799.14	ENST00000676709.1	4764	22	38	27950	-16	0	5prime_fragment	FALSE	canonical	3	2285	junction_1	123.689884388336	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGACAAGGATAG	-38	True	NA	25	True	AAGAAA	-7	NA	226408116	226388697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_142979.known	chrX	+	767	3	FSM	ENSG00000205542.11	ENST00000380635.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	1089	junction_1	17707.5	22911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTCTGTTTGGTT	20	False	NA	31	True	AATAAA	-16	NA	12975243	12977227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12975444_12976245_12976362_12976776
transcript_142980.known	chrX	+	1702	2	FSM	ENSG00000205542.11	ENST00000380636.1	1702	2	0	0	0	0	multi-exon	FALSE	canonical	3	36504	junction_1	0	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTGTCTGTTTGGT	8	True	NA	30	True	AATAAA	-15	NA	12975109	12977226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12976362_12976776
transcript_142981.known	chrX	+	622	3	FSM	ENSG00000205542.11	ENST00000451311.7	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	36504	junction_2	237.5	127506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCTGGTGTGTCTGTTT	8	True	NA	27	True	AATAAA	-12	NA	12975109	12977223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12975169_12976245_12976362_12976776
transcript_142982.known	chrX	-	3361	7	FSM	ENSG00000187268.12	ENST00000333995.7	3361	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGCCTCTGTGGATCT	0	True	NA	NA	False	ATTAAA	-29	NA	13044602	13035711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13038504_13039807_13039917_13040757_13040873_13042917_13042950_13043127_13043249_13043728_13043858_13044539
transcript_142983.nnic	chrX	-	515	3	Antisense	novelGene_ENSG00000226985.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATATTTTTGGGTAATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	13430254	13387553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_13387818_13423298_13423436_13430140
transcript_142985.known	chrX	+	2403	12	FSM	ENSG00000198759.12	ENST00000361306.6	2403	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.25500250726694	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGTCATGGTTTAATT	-12	True	NA	4	True	TTTAAA	-31	NA	13569600	13633575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13569936_13589555_13589669_13594835_13594929_13599974_13600095_13603316_13603437_13606378_13606514_13608323_13608447_13617729_13618054_13619162_13619244_13623823_13623926_13627010_13627277_13632984
transcript_142992.known	chrX	+	393	3	FSM	ENSG00000123595.8	ENST00000243325.6	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	74.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGATATGTAACTAATA	19	True	NA	NA	False	TTTAAA	-45	NA	13689160	13708817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13689289_13703734_13703903_13708720
transcript_142997.known	chrX	+	2034	3	FSM	ENSG00000123595.8	ENST00000464506.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	9.5	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGTGGTTGGTGAC	-14	True	NA	NA	False	GATAAA	-32	NA	13689127	13710504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13689289_13703813_13703903_13708720
transcript_142998.known	chrX	-	2836	6	FSM	ENSG00000196459.15	ENST00000683983.1	2836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.6287695351964	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	-7	True	NA	-16	True	AATAAA	-14	NA	13734620	13712244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734049_13734186_13734524
transcript_142999.known	chrX	-	794	6	FSM	ENSG00000196459.15	ENST00000458511.7	794	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.5520633861202	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATTTATAAAGAGTTC	14	True	NA	NA	False	AATAGA	-25	NA	13734599	13714199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13720427_13720498_13734524
transcript_1430.known	chr1	+	571	6	FSM	ENSG00000251503.8	ENST00000602787.6	571	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	111.755089369567	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGACTTTCCTCGCTT	-24	True	NA	NA	False	TTTAAA	-38	NA	10430434	10451411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_143001.known	chrX	-	2716	5	FSM	ENSG00000196459.15	ENST00000359680.9	2716	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.073476482417	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGGTAGTTTAATATCC	-22	True	NA	-15	True	AATAAA	-15	NA	13734635	13712243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734524
transcript_143005.known	chrX	-	1411	4	FSM	ENSG00000196459.15	ENST00000519382.1	1411	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.9920629920945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATAATAATAGG	68	False	NA	NA	False	NA	NA	NA	13734545	13715536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13716679_13719870_13719983_13734049_13734186_13734524
transcript_143006.known	chrX	-	1673	8	FSM	ENSG00000046653.15	ENST00000355135.6	1673	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	373.548893065157	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	-3	True	NA	NA	False	AAAAAG	-44	NA	13817069	13773953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13807649_13807770_13816843
transcript_143014.known	chrX	-	1830	7	FSM	ENSG00000046653.15	ENST00000356942.9	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	324.835043607606	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	12	False	NA	NA	False	AAAAAG	-44	NA	13817346	13773953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13816843
transcript_143017.known	chrX	-	1033	7	FSM	ENSG00000046653.15	ENST00000398361.7	1033	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	323.850102499426	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATTCAGTTATTTAC	-18	True	NA	NA	False	NA	NA	NA	13938415	13774336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938326
transcript_143019.known	chrX	-	3957	7	FSM	ENSG00000046653.15	ENST00000454189.6	3957	7	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_1	156.191566851593	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	15	True	NA	-6	True	ATTAAA	-19	NA	13938638	13771455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_14302.known	chr1	+	1947	13	FSM	ENSG00000143801.18	ENST00000422240.6	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	29.1328375243851	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCAGGTTTATCCAG	10	True	NA	95	True	NA	NA	NA	226870619	226895803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
transcript_143024.nic	chrX	+	1139	8	ISM	ENSG00000046651.16	ENST00000340096.11	3612	23	-105	22522	-100	-7118	5prime_fragment	FALSE	canonical	3	90	junction_1	8.66849797501604	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAAAGGAGTTAACCA	NA	False	NA	NA	False	ATTAAA	-18	NA	13734642	13746835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779
transcript_143028.nic	chrX	+	1123	5	ISM	ENSG00000046651.16	ENST00000683655.1	4139	23	-178	29471	-100	0	5prime_fragment	FALSE	canonical	3	90	junction_1	7.59522876548166	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAACTTTTAGGCCAAG	NA	False	NA	NA	False	NA	NA	NA	13734642	13739314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001
transcript_143029.known	chrX	+	4299	23	FSM	ENSG00000046651.16	ENST00000682953.1	4299	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	40.2904742346077	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	15	True	NA	-37	True	NA	NA	NA	13734756	13769311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13735084_13735247_13735347_13736107_13736297_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13752703_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13767126_13767285_13768053_13768225_13768717_13768786_13769065
transcript_143030.known	chrX	+	3612	23	FSM	ENSG00000046651.16	ENST00000340096.11	3612	23	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_9	25.147170124872	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTTTGTCTTAAATTT	6	True	NA	9	True	AATAAA	-21	NA	13734747	13769357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13751248_13751369_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
transcript_143038.known	chrX	-	1682	5	FSM	ENSG00000046647.14	ENST00000380523.8	1682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.6990275052586	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGGGCGCAATGGTTC	8	True	NA	NA	False	AATAAA	-20	NA	14029892	14008278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026051_14026222_14029776
transcript_14304.known	chr1	+	2193	12	FSM	ENSG00000143801.18	ENST00000678320.1	2193	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	41.8709153675795	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	NA	False	NA	4	True	AATAAA	-8	NA	226870560	226896086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_143040.known	chrX	-	3147	5	FSM	ENSG00000046647.14	ENST00000680255.1	3147	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	25.6843824142221	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTGTCTTTAAAAATCA	8	True	NA	-21	True	AATAAA	-15	NA	14029892	14006725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139_14026222_14029776
transcript_143043.known	chrX	-	1119	4	FSM	ENSG00000046647.14	ENST00000398355.7	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	39.3474550920669	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTTTTTTATGTTG	7	True	NA	-14	True	CATAAA	-17	NA	14029893	14008672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14029776
transcript_14305.known	chr1	+	2026	12	FSM	ENSG00000143801.18	ENST00000678021.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.1879385377775	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	2	True	NA	4	True	AATAAA	-8	NA	226870611	226896086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_143052.known	chrX	-	2712	10	FSM	ENSG00000181544.15	ENST00000452869.1	2712	10	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_4	21.2939451198089	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAAAATGTTGCA	1	True	NA	NA	False	NA	NA	NA	14873052	14843692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
transcript_143060.nic	chrX	-	762	3	ISM	ENSG00000181544.15	ENST00000452869.1	2712	10	-186	21500	-169	150	5prime_fragment	FALSE	canonical	3	76	junction_2	11	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTAATCCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	14873238	14865192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_14865581_14868922_14869044_14872985
transcript_143061.nnic	chrX	-	730	3	NNC	ENSG00000181544.15	novel	3017	10	NA	NA	-158	150	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	42.5	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTAATCCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	14873227	14865192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_14865581_14868922_14869044_14873006
transcript_143062.nic	chrX	-	502	2	ISM	ENSG00000181544.15	ENST00000324138.7	2894	9	-30	21786	-30	150	5prime_fragment	FALSE	canonical	3	6	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTAATCCTTCA	NA	False	NA	-10	True	AATAAA	-19	NA	14873099	14865192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_14865581_14872985
transcript_143063.known	chrX	+	4183	15	FSM	ENSG00000130150.12	ENST00000380492.8	4183	15	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	8.83984485965999	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGTCTCTAATTGATA	-15	True	NA	NA	False	AATAAA	-18	NA	14873420	14922327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14919671
transcript_143071.nnic	chrX	+	688	3	NNC	ENSG00000130150.12	novel	748	3	NA	NA	-254	7655	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	38	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTATATATATACAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	14873166	14882109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_14873538_14873688_14873759_14881862
transcript_143072.known	chrX	+	748	3	FSM	ENSG00000130150.12	ENST00000461777.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTCTGTATATTGTTT	4	True	NA	NA	False	NA	NA	NA	14873490	14893353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_14873538_14873688_14873759_14892722
transcript_143073.known	chrX	-	332	1	FSM	ENSG00000236929.2	ENST00000444401.2	332	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTAATGAAAAGTAAATAAA	NA	False	NA	-38	True	NA	NA	NA	15117768	15117436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15117400_15117800
transcript_143074.known	chrX	-	1947	8	FSM	ENSG00000102048.16	ENST00000546332.1	1947	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.03015750727543	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTAAGCTTCCCT	8165	False	NA	NA	False	AATAAA	-24	NA	15270467	15243988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15244631_15248682_15248936_15250429_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780_15270010_15270118
transcript_143075.known	chrX	-	1652	7	FSM	ENSG00000102048.16	ENST00000380485.7	1652	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.957427107756338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTAAGCTTCCCTGT	8	True	NA	NA	False	AATAAA	-26	NA	15270061	15243986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15244631_15248682_15248936_15250429_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780
transcript_143076.known	chrX	-	1613	7	FSM	ENSG00000102048.16	ENST00000380488.9	1613	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.06718737290547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTAAGCTTCCCTGT	-14	True	NA	NA	False	AATAAA	-26	NA	15270083	15243986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15244631_15248743_15248936_15250429_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780
transcript_143077.known	chrX	-	3590	6	FSM	ENSG00000165195.16	ENST00000333590.6	3590	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	10.8921990433521	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	11	True	NA	-7	True	AATAAA	-23	NA	15335523	15319455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331993_15335500
transcript_143078.known	chrX	-	3246	6	FSM	ENSG00000165195.16	ENST00000635598.1	3246	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	15.0013332740793	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGAGTTTGTCTTAT	-20	True	NA	-8	True	AATAAA	-22	NA	15335554	15319456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331589_15331993_15335500
transcript_143079.known	chrX	-	854	6	FSM	ENSG00000165195.16	ENST00000634640.1	854	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	14.1619207736804	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTATTCTCACAGTAAA	-20	True	NA	NA	False	AATAGA	-30	NA	15335554	15321564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331873_15331993_15335500
transcript_143080.known	chrX	-	965	5	FSM	ENSG00000165195.16	ENST00000634582.1	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	17.0348906659245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTCTTGCACTTATTT	-10	True	NA	NA	False	GATAAA	-24	NA	15335544	15321324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15335500
transcript_143088.known	chrX	-	1539	10	FSM	ENSG00000087842.11	ENST00000380421.3	1539	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	25.8977095130958	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493564	15384798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493155
transcript_143089.known	chrX	-	1274	10	FSM	ENSG00000087842.11	ENST00000380420.10	1274	10	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_7	8.62525719781127	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	-6	True	NA	0	True	AATAAA	-24	NA	15493333	15384798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
transcript_143090.nnic	chrX	-	1392	10	NNC	ENSG00000087842.11	novel	1539	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_9	28.2925632596707	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493558	15384798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493296
transcript_143093.nnic	chrX	-	1216	9	NIC	ENSG00000087842.11	novel	1274	10	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	30.5488850042027	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493359	15384798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15479728_15479822_15491161_15491310_15493189
transcript_143097.nnic	chrX	-	1255	9	NIC	ENSG00000087842.11	novel	1274	10	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_3	28.0891438103763	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493359	15384798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_15385117_15390184_15390252_15397448_15397532_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
transcript_14311.known	chr1	+	2866	15	FSM	ENSG00000163050.18	ENST00000366777.4	2866	15	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_6	17.4830822015257	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGCGTGTACCCTCTT	-2	True	NA	19	True	AATAAA	-19	NA	226940293	226987544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226940400_226961376_226961563_226964999_226965411_226965670_226965738_226977448_226977524_226982026_226982150_226982677_226982764_226982893_226983035_226983551_226983634_226983760_226983855_226984093_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
transcript_143114.known	chrX	+	6837	8	FSM	ENSG00000169239.13	ENST00000318636.8	6837	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1.77281052085584	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTACTATCTTGATT	-22	True	NA	4	True	AATAAA	-19	NA	15738269	15788411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15738353_15749970_15750166_15764577_15764776_15772495_15772615_15774301_15774398_15775245_15775309_15776713_15776870_15782484
transcript_143118.nnic	chrX	-	1441	7	NNC	ENSG00000147003.7	novel	1352	6	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6.89605362185907	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	-12	True	NA	-8	True	AATAAA	-27	NA	15675106	15627317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717_15664777_15674988
transcript_143119.nnic	chrX	-	1427	7	NNC	ENSG00000147003.7	novel	1352	6	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6.89605362185907	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	-12	True	NA	-8	True	AATAAA	-27	NA	15675106	15627317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717_15664777_15675002
transcript_143120.known	chrX	-	1574	7	FSM	ENSG00000147003.7	ENST00000650271.1	1574	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	6.9860973050449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATTTTCTGAATATCA	628	False	NA	NA	False	NA	NA	NA	15675012	15627438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15667529_15667937_15674988
transcript_143127.known	chrX	-	1352	6	FSM	ENSG00000147003.7	ENST00000380342.4	1352	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	6.01331855134916	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	1	True	NA	-8	True	AATAAA	-27	NA	15664805	15627317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717
transcript_143129.nnic	chrX	-	1393	6	NNC	ENSG00000147003.7	novel	1352	6	NA	NA	-119	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.08801805866774	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	509	False	NA	-8	True	AATAAA	-27	NA	15675131	15627317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15675002
transcript_143131.nnic	chrX	-	1514	6	NNC	ENSG00000147003.7	novel	1352	6	NA	NA	-660	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.08801805866774	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	NA	False	NA	-8	True	AATAAA	-27	NA	15675672	15627317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15675422
transcript_143148.known	chrX	+	1264	4	FSM	ENSG00000186312.10	ENST00000380334.6	1264	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.6316371938716	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	88	False	NA	NA	False	AATAAA	-21	NA	15675545	15703724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15675573_15688660_15688859_15692962_15693059_15702781
transcript_143149.nnic	chrX	+	767	4	NNC	ENSG00000169239.13	novel	6837	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	5.71547606649408	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATGCCTCTAAGCCTA	-22	True	NA	29	True	TATAAA	-15	NA	15738269	15784535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_15738353_15749970_15750166_15764577_15764704_15784172
transcript_143152.nic	chrX	+	1070	3	ISM	ENSG00000186312.10	ENST00000380334.6	1264	4	-145	10062	-145	2421	5prime_fragment	FALSE	canonical	3	33	junction_1	43	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAACTTTTAA	NA	False	NA	NA	False	NA	NA	NA	15675400	15693662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_15675573_15688660_15688859_15692962
transcript_143154.nnic	chrX	+	1310	3	NIC	ENSG00000186312.10	novel	1264	4	NA	NA	-145	-3	combination_of_known_splicesites	FALSE	canonical	3	30	junction_2	1.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGGTGTCTTTATTATC	NA	False	NA	NA	False	AATAAA	-18	NA	15675400	15703721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_15675573_15688660_15688859_15702781
transcript_143155.known	chrX	+	2205	8	FSM	ENSG00000169239.13	ENST00000454127.2	2205	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_7	4.92391083988974	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATGCCTCTAAGCCTA	83	False	NA	29	True	TATAAA	-15	NA	15749969	15784535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15750166_15764577_15764776_15772495_15772615_15774301_15774398_15775245_15775309_15776713_15776870_15782484_15783512_15784185
transcript_143156.known	chrX	+	1479	11	FSM	ENSG00000169249.14	ENST00000307771.8	1479	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_10	18.762729012593	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	10	True	NA	12	True	AATAAA	-18	NA	15790483	15823260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
transcript_143158.nic	chrX	+	1091	7	ISM	ENSG00000169249.14	ENST00000307771.8	1479	11	-13	13433	0	6031	5prime_fragment	FALSE	canonical	3	112	junction_1	14.742229591664	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTTGGCATGTGTAAA	-3	True	NA	NA	False	AAAAAG	-12	NA	15790470	15809827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199
transcript_14316.known	chr1	+	533	5	FSM	ENSG00000181450.18	ENST00000465266.1	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	12.7549010188241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGACCTTTTGCCAGAG	-1	True	NA	NA	False	NA	NA	NA	227563550	227654353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227650955_227651077_227654335
transcript_143168.known	chrX	+	744	4	FSM	ENSG00000169249.14	ENST00000380308.7	744	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	58.9463032485216	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACATACATGTATCTTTGT	-2	True	NA	NA	False	TTTAAA	-1	NA	15790471	15801790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15801273
transcript_143169.nic	chrX	+	643	4	ISM	ENSG00000169249.14	ENST00000307771.8	1479	11	-319	19464	9	0	5prime_fragment	FALSE	canonical	3	112	junction_1	18.8325958557674	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGTAGGAATCACGTAA	NA	False	NA	NA	False	NA	NA	NA	15790164	15803796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687
transcript_143174.known	chrX	-	2237	5	FSM	ENSG00000182287.15	ENST00000329235.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	593.850307316583	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTGACTTTTCTACTC	310	False	NA	-8	True	AATAAA	-21	NA	15854931	15825805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15827373_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_143175.known	chrX	-	1925	5	FSM	ENSG00000182287.15	ENST00000450644.2	1925	5	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	632.169429425372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACAGCTGCTTGCTTT	-6	True	NA	-93	True	NA	NA	NA	15854755	15830137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15831569_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_143182.nnic	chrX	-	1315	8	NNC	ENSG00000238178.7	novel	1037	6	NA	NA	-13191	100	intron_retention	FALSE	canonical	1	3	junction_6	41.2478818256409	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTGAAAACAGAGTCAAG	-2	True	NA	-13	True	AATAAA	-31	NA	16184060	16153099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_16153464_16154597_16154681_16157752_16157860_16159652_16159696_16167206_16167343_16168680_16168894_16182348_16182538_16183880
transcript_143183.nnic	chrX	-	1297	8	NNC	ENSG00000238178.7	novel	1037	6	NA	NA	-13273	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	41.2478818256409	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAGTGTCCCTCATA	NA	False	NA	-5	True	ATTAAA	-21	NA	16184142	16153199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_16153464_16154597_16154681_16157752_16157860_16159652_16159696_16167206_16167343_16168680_16168894_16182348_16182538_16183880
transcript_143186.known	chrX	+	2417	3	FSM	ENSG00000126010.6	ENST00000380289.3	2417	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	4.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTATTTATTCTTG	0	True	NA	NA	False	TATAAA	-7	NA	16123564	16153518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_16124367_16150304_16150657_16152255
transcript_143189.known	chrX	+	1434	2	FSM	ENSG00000182798.10	ENST00000400004.6	1434	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCCCAAGACGTGTCTT	NA	False	NA	NA	False	NA	NA	NA	16167480	16171464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_16167784_16170333
transcript_14319.known	chr1	+	798	4	FSM	ENSG00000181450.18	ENST00000440339.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	10.3387082795139	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCATACTGGAGAGAAAC	28	False	NA	NA	False	NA	NA	NA	227563579	227654768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227654335
transcript_143190.known	chrX	-	894	5	FSM	ENSG00000238178.7	ENST00000454712.7	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	4.12310562561766	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAGTGTCCCTCATA	1075	False	NA	-5	True	ATTAAA	-21	NA	16167603	16153199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16153464_16154597_16154681_16157752_16157860_16159652_16159696_16167206
transcript_143192.known	chrX	-	3953	19	FSM	ENSG00000047230.15	ENST00000359276.9	3953	19	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_18	37.1408729628753	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	-41	True	NA	-8	True	AATAAA	-26	NA	16712669	16587998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
transcript_143195.known	chrX	-	3526	19	FSM	ENSG00000047230.15	ENST00000380241.7	3526	19	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_18	49.748410235782	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGCTGAATAATTAAT	6728	False	16712957	NA	False	NA	NA	NA	16712936	16588305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
transcript_143198.nnic	chrX	-	2334	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_18	51.6884362739331	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	-50	True	NA	-6	True	ATTAAA	-19	NA	16712678	16589548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
transcript_143199.nnic	chrX	-	2214	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_18	55.0483513618194	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	6961	False	NA	-6	True	ATTAAA	-19	NA	16712703	16589548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_14320.known	chr1	+	8543	4	FSM	ENSG00000181450.18	ENST00000343776.10	8543	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	7.25718035235908	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTGTTTTCTTTAACA	4	True	NA	18	True	AATAAA	-18	NA	227563555	227662461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227563725_227646543_227646671_227650955_227651077_227654335
transcript_143213.known	chrX	+	6153	9	FSM	ENSG00000169895.6	ENST00000380155.4	6153	9	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	33.9926462635671	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGGTTGTTCC	-14	True	NA	8	True	AATAAA	-27	NA	16719611	16765340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_16719900_16735226_16735346_16736165_16736233_16741715_16741790_16743700_16743841_16754944_16755094_16756662_16756722_16757161_16757310_16760231
transcript_143218.known	chrX	+	604	3	FSM	ENSG00000169895.6	ENST00000495743.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	44.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGAGTCTTGCTCTGT	28	False	NA	NA	False	NA	NA	NA	16719770	16736521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_16719900_16735226_16735346_16736165
transcript_14322.nic	chr1	+	618	3	ISM	ENSG00000181450.18	ENST00000465266.1	533	5	-44	7503	-36	-7503	5prime_fragment	FALSE	canonical	3	37	junction_2	9.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATTTTAAGGTGGTCT	NA	False	NA	NA	False	AATAAA	-24	NA	227563506	227646850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_227563725_227582513_227582607_227646543
transcript_143224.known	chrX	-	2281	12	FSM	ENSG00000102054.18	ENST00000380087.7	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_9	67.0604759751713	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGATATCTGCATCAT	-11	True	NA	-4	True	AATAAA	-20	NA	16870362	16844340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16870037
transcript_143227.known	chrX	-	1904	12	FSM	ENSG00000102054.18	ENST00000404022.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	240.918627598546	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	-10	True	NA	-53	True	NA	NA	NA	16870361	16844689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858823_16862954_16863101_16869075_16869221_16870037
transcript_143228.known	chrX	-	2036	12	FSM	ENSG00000102054.18	ENST00000380084.8	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_11	228.773336884833	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGTTTTTTTAAA	-21	True	NA	-17	True	AATAAA	-11	NA	16869886	16844653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16869493
transcript_143235.known	chrX	+	4362	10	FSM	ENSG00000086712.13	ENST00000380122.10	4362	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	19.3779816503037	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTATTCTTTC	10	True	NA	104	True	AGTAAA	-19	NA	16786465	16844519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592_16837686_16839820_16839917_16841427
transcript_143250.known	chrX	-	212	2	FSM	ENSG00000102054.18	ENST00000493145.1	212	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGTCTTACCGTTCAG	5118	False	NA	NA	False	AATACA	-41	NA	16870153	16869115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16869221_16870046
transcript_143251.known	chrX	-	858	4	FSM	ENSG00000102054.18	ENST00000330735.7	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	857	junction_1	63.5941995957353	2061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTTTTAAAAGCT	NA	False	NA	-13	True	AATAAA	-15	NA	16852280	16844649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045
transcript_143252.known	chrX	-	630	3	FSM	ENSG00000102054.18	ENST00000468092.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	435.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGGTATATCATATATT	7	True	NA	NA	False	NA	NA	NA	16870344	16862956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16863101_16869075_16869255_16870037
transcript_143253.known	chrX	-	1535	3	FSM	ENSG00000102054.18	ENST00000486166.1	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_2	25	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGACAGTTTTCTGG	4255	False	NA	NA	False	ATTAAA	-40	NA	16858803	16852551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16853843_16857593_16857710_16858675
transcript_143254.known	chrX	+	8213	9	FSM	ENSG00000188158.17	ENST00000398097.7	8213	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.96452920568771	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTGACTGCAATTAAACAAC	118	False	NA	-2	True	AATAAA	-1	NA	17635292	17735978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_17635601_17687741_17687895_17692334_17692469_17719343_17719407_17721440_17721634_17724298_17724431_17725346_17728329_17728648_17728776_17731857
transcript_143255.known	chrX	+	2887	8	FSM	ENSG00000047634.15	ENST00000380041.8	2887	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.94532915619566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	22	True	NA	12	True	AATAAA	-20	NA	17737492	17754985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_17737681_17744070_17744220_17745455_17745540_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_143265.known	chrX	+	2679	6	FSM	ENSG00000047634.15	ENST00000380045.7	2679	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.72046505340853	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	-3	True	NA	12	True	AATAAA	-20	NA	17737467	17754985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_17737681_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_143268.known	chrX	+	2704	6	FSM	ENSG00000047634.15	ENST00000398080.5	2704	6	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	4.1182520563948	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTCAGATGTGATTTC	-22	True	NA	15	True	AATAAA	-23	NA	17737448	17754988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_17737681_17746014_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_14327.nic	chr1	+	768	2	ISM	ENSG00000181450.18	ENST00000343776.10	8543	4	-35	15354	-22	-7246	5prime_fragment	FALSE	canonical	3	40	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGGCGTGGTGGCAT	NA	False	NA	NA	False	AATACA	-9	NA	227563520	227647107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_227563725_227646543
transcript_143274.known	chrX	+	2830	7	FSM	ENSG00000047634.15	ENST00000380043.7	2830	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.90668171555645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	-2	True	NA	12	True	AATAAA	-20	NA	17737468	17754985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_17737681_17744070_17744220_17746014_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_14328.known	chr1	+	2768	6	FSM	ENSG00000143740.15	ENST00000680854.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	127.875564514883	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	10	True	NA	NA	False	NA	NA	NA	227728634	227781821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227731584_227731748_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_143282.nnic	chrX	-	875	5	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-124	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104768	17970128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_17982490_17982595_18025374_18025486_18104550
transcript_14329.known	chr1	+	1541	5	FSM	ENSG00000143740.15	ENST00000680695.1	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	133.355492950234	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	26	False	NA	15	True	NA	NA	NA	227728706	227781208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227731584_227731748_227758994_227759486_227766958_227767084_227780526
transcript_143290.nnic	chrX	-	783	4	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-143	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.88561808316413	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104787	17970128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_17982490_17982595_18104550
transcript_143298.nnic	chrX	-	656	3	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-120	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104764	17970128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_18104550
transcript_143299.nnic	chrX	-	590	3	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-139	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104783	17970128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_18104635
transcript_14330.known	chr1	+	2552	5	FSM	ENSG00000143740.15	ENST00000680992.1	2552	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	114.632019959521	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	7	True	NA	NA	False	NA	NA	NA	227728687	227781821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_143300.nnic	chrX	-	681	3	NIC	ENSG00000225882.1	novel	708	5	NA	NA	-116	68	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104760	17970128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_17970431_17971986_17972156_18104550
transcript_143303.nnic	chrX	-	535	2	NIC	ENSG00000225882.1	novel	708	5	NA	NA	-139	68	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104783	17970128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_17970431_18104550
transcript_143304.nnic	chrX	-	453	2	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-158	-111010	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGAGATTTTGATGTC	NA	False	NA	NA	False	AATAAA	-18	NA	18104802	18081206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_18081408_18104550
transcript_143305.known	chrX	-	4162	15	FSM	ENSG00000102098.19	ENST00000251900.9	4162	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	17.421104958044	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	-1	True	NA	-11	True	AATAAA	-19	NA	18354688	18239312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
transcript_143307.known	chrX	+	3449	21	FSM	ENSG00000008086.13	ENST00000379996.7	3449	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.46543508897528	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGCTGAGGTTGAGTTT	1	True	NA	NA	False	AATGAA	-8	NA	18425582	18653625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_18425696_18506934_18507161_18510819_18510855_18564476_18564523_18575353_18575491_18579847_18579969_18581890_18581951_18584262_18584354_18587953_18588144_18595347_18595429_18598461_18598614_18603901_18604869_18608810_18608913_18609464_18609571_18613151_18613276_18619866_18619967_18625127_18625248_18628370_18628588_18646006_18646091_18650409_18650593_18653431
transcript_14331.known	chr1	+	2503	5	FSM	ENSG00000143740.15	ENST00000680202.1	2503	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	115.061668247944	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	233	False	NA	NA	False	NA	NA	NA	227735680	227781821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227735731_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_143313.known	chrX	-	5077	33	FSM	ENSG00000044446.12	ENST00000379942.5	5077	33	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_4	19.102928440425	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGCCAGGAGGTGCG	-9	True	NA	-10	True	AATAAA	-21	NA	18984114	18892297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18899172_18899227_18900669_18900700_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_143314.known	chrX	-	514	3	FSM	ENSG00000044446.12	ENST00000473597.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGCCCCCTAGCCTTAC	NA	False	NA	NA	False	NA	NA	NA	18895242	18893447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_18893656_18894203_18894405_18895137
transcript_14332.known	chr1	+	1446	4	FSM	ENSG00000143740.15	ENST00000366760.5	1446	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	122.224747448661	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	32	True	NA	33	True	AATAAA	-18	NA	227728656	227781226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227758994_227759486_227766958_227767084_227780526
transcript_143328.known	chrX	-	2049	8	FSM	ENSG00000180815.15	ENST00000470101.1	2049	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	4.52656557650139	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATGGTCAGCGCGAA	NA	False	NA	-4	True	AATAAA	-14	NA	19373178	19360059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_19360834_19361338_19361416_19361492_19361594_19362737_19362851_19369053_19369220_19370958_19371065_19371344_19371531_19372652
transcript_143331.known	chrX	+	3484	12	FSM	ENSG00000131828.14	ENST00000379806.9	3484	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	502.774566244962	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	NA	False	NA	63	True	AATAAA	-38	NA	19343892	19361705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19346509_19346624_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_143333.known	chrX	+	3391	11	FSM	ENSG00000131828.14	ENST00000545074.5	3391	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	403.467421237453	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	NA	False	NA	63	True	AATAAA	-38	NA	19343892	19361705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351259_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_143334.known	chrX	+	3349	11	FSM	ENSG00000131828.14	ENST00000422285.7	3349	11	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_1	98.6470475990032	4243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAACCACGCTAATAC	-24	True	NA	76	True	AAAAAG	-19	NA	19343926	19361718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_143338.known	chrX	+	3277	10	FSM	ENSG00000131828.14	ENST00000540249.5	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	400.103042283415	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	NA	False	NA	63	True	AATAAA	-38	NA	19343892	19361705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_14334.known	chr1	+	1363	4	FSM	ENSG00000143740.15	ENST00000681929.1	1363	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	116.608556956836	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	-13	True	NA	15	True	NA	NA	NA	227735434	227781208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227735500_227758994_227759486_227766958_227767084_227780526
transcript_143343.known	chrX	+	611	4	FSM	ENSG00000131828.14	ENST00000492364.1	611	4	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_1	126.093439780012	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTAAGTTTCTTTTTT	-15	True	NA	NA	False	TTTAAA	-42	NA	19343935	19351498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280
transcript_143344.known	chrX	+	734	5	FSM	ENSG00000131828.14	ENST00000379805.3	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_1	114.092889787226	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATTATAATGGAGCTG	17	True	NA	NA	False	NA	NA	NA	19343967	19353327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081
transcript_143345.known	chrX	-	3819	13	FSM	ENSG00000147010.18	ENST00000379716.5	3819	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_12	167.231293589315	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATGATTAAAATGAAAT	1	True	NA	-31	True	TATAAA	-40	NA	19670998	19534006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_19536459_19537716_19537781_19541924_19542194_19545921_19546051_19549973_19550084_19569102_19569189_19588642_19588803_19592066_19592148_19594948_19595001_19607937_19608046_19631863_19631959_19645399_19645476_19670861
transcript_143349.known	chrX	-	4062	17	FSM	ENSG00000184368.16	ENST00000379643.10	4062	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	5.09901951359278	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGTCAACTGCATAAAG	0	True	NA	NA	False	ATTAAA	-24	NA	20116907	20006712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20008399_20010776_20011053_20012348_20012536_20013053_20013133_20013568_20013626_20015222_20015328_20016093_20016326_20024950_20025084_20025680_20025953_20042501_20042630_20044363_20044525_20050823_20050947_20052877_20052989_20056679_20056792_20063413_20063578_20064727_20064806_20116749
transcript_143354.known	chrX	-	765	6	FSM	ENSG00000173674.11	ENST00000379593.1	765	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	403.328848459914	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGACCATGTCTACTAA	11	True	NA	NA	False	NA	NA	NA	20141826	20128077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20141624
transcript_143357.known	chrX	-	4414	7	FSM	ENSG00000173674.11	ENST00000379607.10	4414	7	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_4	131.466620182548	3930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTATACAATTGATTCT	-1	True	NA	-6	True	AATAAA	-18	NA	20141838	20124524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
transcript_143358.known	chrX	-	2682	22	FSM	ENSG00000177189.14	ENST00000646610.1	2682	22	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_21	17.3851919160872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATACAGTACATTTC	370	False	NA	NA	False	NA	NA	NA	20267100	20154931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20267038
transcript_14336.known	chr1	+	2375	3	FSM	ENSG00000143740.15	ENST00000480897.5	2375	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	227728538	227734352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227731584_227731748_227732388
transcript_143361.known	chrX	-	7987	22	FSM	ENSG00000177189.14	ENST00000379565.9	7987	22	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	11.3066913746361	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCCCTTTTATCAGA	-29	True	NA	0	True	AATAAA	-17	NA	20266909	20149910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20266563
transcript_143362.known	chrX	+	5360	21	FSM	ENSG00000149970.16	ENST00000642359.1	5360	21	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_20	18.0471604414656	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAACTGTTCTTTTAAG	7	False	NA	NA	False	AATACA	-23	NA	21374297	21643600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458_21490579_21497786_21497847_21501519_21501589_21516484_21516632_21526866_21527001_21531855_21532068_21561470_21561561_21563237_21563453_21590571_21590621_21591021_21591195_21594973_21595048_21595323_21595396_21601281_21601350_21606778_21606880_21609070_21609618_21641532
transcript_143365.known	chrX	+	3808	6	FSM	ENSG00000149970.16	ENST00000644832.1	3808	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	4.02988833592198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATTAGCAGAAAAT	0	True	NA	NA	False	TTTAAA	-2	NA	21374421	21493229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458
transcript_143368.known	chrX	-	885	5	FSM	ENSG00000091482.8	ENST00000379494.4	885	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAATCTAGACTAAATTA	10	True	NA	NA	False	AATAAA	-20	NA	21758116	21705977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_21706395_21737548_21737698_21743749_21743837_21754245_21754303_21757941
transcript_143370.known	chrX	+	4446	11	FSM	ENSG00000012174.12	ENST00000379484.10	4446	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	10.3653268158799	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTCTATGTGTTGTCT	-6	True	NA	20	True	AATAAA	-32	NA	21839616	21885423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497_21869679_21878041_21878137_21878496_21878693_21880896_21880973_21882432
transcript_143375.known	chrX	+	4457	7	FSM	ENSG00000012174.12	ENST00000365779.2	4457	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	11.0867789130417	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCCTGGAAGTGCTTG	-9	True	NA	NA	False	AATAAA	-16	NA	21839653	21873084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497
transcript_143379.nnic	chrX	+	2631	6	NNC	ENSG00000012174.12	novel	1862	6	NA	NA	-40	2058	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	35.7692605458933	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTGCCTATGTCAATA	NA	False	NA	NA	False	AATAAA	-26	NA	21839576	21859651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21857848
transcript_14338.known	chr1	-	3749	2	FSM	ENSG00000081692.13	ENST00000485807.1	3749	2	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGACACCAGGGCCAGGT	895	False	NA	NA	False	NA	NA	NA	227734377	227730424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_227732677_227732880
transcript_143380.nic	chrX	+	1989	5	ISM	ENSG00000012174.12	ENST00000465888.1	1862	6	-59	2929	-40	-2929	5prime_fragment	FALSE	canonical	3	64	junction_2	13.0862523283024	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGAAAAGTATAAGAAGAA	NA	False	NA	NA	False	AAAACA	-5	NA	21839576	21854664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375
transcript_143381.nic	chrX	+	526	2	ISM	ENSG00000012174.12	ENST00000465888.1	1862	6	-59	14131	-40	-14131	5prime_fragment	FALSE	canonical	3	86	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATGGGATTGTATCATT	NA	False	NA	NA	False	ATTAAA	-20	NA	21839576	21843462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_21839810_21843169
transcript_143385.known	chrX	+	1703	11	FSM	ENSG00000102172.16	ENST00000404933.7	1703	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	480.817231388394	3110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	-13	True	NA	15	True	ATTAAA	-16	NA	21940708	21994837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21940874_21967195_21967317_21971896_21971991_21972506_21972572_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_143386.known	chrX	+	1174	9	FSM	ENSG00000102172.16	ENST00000379404.5	1174	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	680.826324678328	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATTTTTAATTTAAAAA	-7	True	NA	NA	False	NA	NA	NA	21940714	21994473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21940874_21967195_21967317_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_143387.known	chrX	+	681	2	FSM	ENSG00000174028.6	ENST00000312214.5	681	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGGAAATGTGGAGAGAA	-4	True	NA	NA	False	NA	NA	NA	23075757	23076767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23076340_23076668
transcript_143388.nnic	chrX	+	953	4	NNC	ENSG00000165186.12	novel	12883	3	NA	NA	-491	-41630	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.16024689946929	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAATTTGTCATGTTT	-26	True	NA	NA	False	AATAAA	-16	NA	23334357	23351478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_23334462_23334874_23335227_23350473_23350608_23351115
transcript_14339.known	chr1	-	2484	6	FSM	ENSG00000081692.13	ENST00000620518.5	2484	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	15.1340675299141	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCCAGGGACCTGTA	-30	True	NA	-4	True	AATGAA	-15	NA	227735302	227731190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_227732677_227732880_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_143396.known	chrX	+	956	7	FSM	ENSG00000123131.13	ENST00000379341.9	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	2342	junction_6	326.478006746073	11220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTTGCAGTAGTAAT	-5	True	NA	18	True	AATAAA	-20	NA	23667492	23686397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23667812_23671528_23671647_23674989_23675107_23679164_23679288_23682395_23682527_23683670_23683706_23686284
transcript_14340.known	chr1	-	2502	6	FSM	ENSG00000081692.13	ENST00000438896.3	2502	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	48.6357892914261	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCTTCATATGTGTCTG	NA	False	NA	-12	True	NA	NA	NA	227735411	227731233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_227732677_227732928_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_14341.known	chr1	+	1397	5	FSM	ENSG00000143740.15	ENST00000478768.3	1397	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	111.768734447519	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTCTCCCTAGTACT	-13	True	NA	8	True	AATGAA	-20	NA	227735434	227770744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227770570
transcript_143412.known	chrX	+	852	3	FSM	ENSG00000123131.13	ENST00000379331.3	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	2557	junction_2	5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTTACACAGTTATATA	0	True	NA	NA	False	TTTAAA	-12	NA	23667550	23675462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23667812_23671528_23671647_23674989
transcript_143414.nic	chrX	-	1602	14	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	60.2841398279257	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	2586	False	NA	-18	True	AATAAA	-15	NA	23743307	23703676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_14342.known	chr1	+	1378	4	FSM	ENSG00000143740.15	ENST00000681465.1	1378	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.31298539985	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	2684	False	NA	15	True	NA	NA	NA	227739222	227781208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227739303_227758994_227759486_227766958_227767084_227780526
transcript_143423.known	chrX	-	683	7	FSM	ENSG00000123130.17	ENST00000492081.1	683	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	104.072757669281	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGCTGCAGAAGAGATTA	1	True	NA	0	True	AATAAA	-23	NA	23743250	23707830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23707945_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_143425.known	chrX	-	4318	16	FSM	ENSG00000123130.17	ENST00000379303.10	4318	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	82.5659063348116	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGACCCTTAAATTATT	-25	True	NA	-1	True	AGTAAA	-20	NA	23743276	23701054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23734340_23734368_23735918_23736017_23743124
transcript_143426.known	chrX	-	1675	15	FSM	ENSG00000123130.17	ENST00000336430.11	1675	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	64.4871842987078	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	-25	True	NA	-12	True	AATAAA	-21	NA	23743276	23703670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_143429.known	chrX	+	1049	6	FSM	ENSG00000130066.17	ENST00000379270.5	1049	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	36.351616195157	4217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	1	True	NA	23	True	AATAAA	-17	NA	23783172	23786210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685
transcript_143430.known	chrX	+	1135	7	FSM	ENSG00000130066.17	ENST00000489394.5	1135	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	229.644411113259	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	25	False	NA	23	True	AATAAA	-17	NA	23783196	23786210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23784293_23784404_23785327_23785430_23785519_23785561_23785685
transcript_14344.known	chr1	+	578	6	FSM	ENSG00000143761.16	ENST00000473949.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1246.29264621115	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGCACTCACTACGC	77	False	NA	NA	False	NA	NA	NA	228082790	228097894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228082851_228096450_228096505_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_143440.known	chrX	-	1122	9	FSM	ENSG00000184831.14	ENST00000379226.9	1122	9	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_1	49.7418335005858	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	-17	True	NA	-4	True	ATTAAA	-21	NA	23907938	23833352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_143447.nic	chrX	-	1070	9	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_1	63.0590001506526	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	NA	False	NA	-11	True	ATTAAA	-14	NA	23907995	23833359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_143451.nnic	chrX	-	1046	8	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-32	0	intron_retention	FALSE	canonical	3	42	junction_7	105.921804041607	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	NA	False	NA	-4	True	ATTAAA	-21	NA	23907970	23833352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23907693
transcript_143459.known	chrX	-	916	8	FSM	ENSG00000184831.14	ENST00000490078.2	916	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	114.352480497444	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAAAAATCCGAT	18	True	NA	-18	True	ATTAAA	-7	NA	23907903	23833366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23878914_23879035_23880844_23880953_23907693
transcript_143478.known	chrX	-	714	8	FSM	ENSG00000184831.14	ENST00000439528.5	714	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	67.2976938077133	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCCGATATCA	3125	False	NA	-14	True	ATTAAA	-11	NA	23880901	23833362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844
transcript_143479.known	chrX	-	244	2	FSM	ENSG00000184831.14	ENST00000476598.1	244	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	NA	False	NA	-11	True	ATTAAA	-14	NA	23840405	23833359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23833511_23840312
transcript_143480.known	chrX	+	1549	9	FSM	ENSG00000165182.12	ENST00000379211.8	1549	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.330718913883074	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGAGTATGCTCTCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	23908005	23939509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23908330_23910282_23910419_23911756_23911857_23915699_23915795_23916216_23916329_23927238_23927371_23935195_23935426_23938546_23938701_23939243
transcript_143481.known	chrX	+	3457	12	FSM	ENSG00000130741.11	ENST00000253039.9	3457	12	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_4	136.448700740917	1063	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATCTAACATGTCCC	5	True	NA	25	True	AATAAA	-21	NA	24054955	24078810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073264_24076721
transcript_143484.nic	chrX	+	1541	9	ISM	ENSG00000005889.16	ENST00000304543.10	7612	10	-25	7248	-20	6	5prime_fragment	FALSE	canonical	3	17	junction_1	10.7463656647259	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGACCTGATTCCAGG	-1	True	NA	NA	False	AAGAAA	-2	NA	24149703	24209007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_24149795_24151690_24151801_24152719_24152831_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899
transcript_143487.nic	chrX	+	1418	8	NIC	ENSG00000005889.16	novel	7612	10	NA	NA	-7	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	14.7496108561603	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGACCTGATTCCAGG	-26	True	NA	NA	False	AAGAAA	-2	NA	24149716	24209007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_24149795_24152719_24152831_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899
transcript_143488.nic	chrX	+	1432	7	NIC	ENSG00000005889.16	novel	7513	9	NA	NA	-37	6	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	10.0443461155462	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAGACCTGATTCCAGG	126	False	NA	NA	False	AAGAAA	-2	NA	24149591	24209007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_24149795_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899
transcript_143490.known	chrX	+	7558	11	FSM	ENSG00000005889.16	ENST00000379177.5	7558	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	15.2515572975352	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTGGAGTGTTGGCTA	2	True	NA	12	True	AATAAA	-22	NA	24149744	24216089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24149795_24151690_24151801_24152719_24152831_24161714_24161843_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
transcript_143494.known	chrX	-	348	1	FSM	ENSG00000225071.1	ENST00000419089.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	23	False	NA	NA	False	NA	NA	NA	24429920	24429572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24429600_24429900
transcript_143497.known	chrX	+	12720	12	FSM	ENSG00000067992.17	ENST00000568479.2	12720	12	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_11	27.902723585182	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	10	True	NA	17	True	AATAAA	-18	NA	24465285	24550466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133
transcript_143500.known	chrX	+	1741	11	FSM	ENSG00000067992.17	ENST00000379162.9	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_7	21.6785608378416	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGATTCCACTTATGT	10	True	NA	6	True	AATAAA	-20	NA	24465285	24534422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928
transcript_143503.known	chrX	-	1289	9	FSM	ENSG00000102230.14	ENST00000356768.8	1289	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	27.8205746705563	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCAAAGTGCTTCTG	168	False	NA	NA	False	AATAAA	-14	NA	24647158	24561841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24562118_24562442_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_143506.nnic	chrX	-	1257	8	NNC	ENSG00000102230.14	novel	1289	9	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3476455732028	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCAAAGTGCTTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	24647369	24561841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_24561938_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_143508.known	chrX	-	5558	8	FSM	ENSG00000102230.14	ENST00000379144.7	5558	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	2.35606035749581	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGTGTCATTGTCAT	-21	True	NA	-1	True	AATAAA	-17	NA	24647347	24558086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_14351.known	chr1	+	820	5	FSM	ENSG00000143761.16	ENST00000470558.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	994.829727893171	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTTGTTTCCAATGA	75	False	NA	NA	False	NA	NA	NA	228082788	228098188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228082851_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_143511.known	chrX	-	856	7	FSM	ENSG00000102230.14	ENST00000496020.1	856	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	32.401988965014	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCACCTTCTCATGGCT	6	True	NA	NA	False	NA	NA	NA	24647038	24562400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_143513.known	chrX	+	416	2	FSM	ENSG00000236487.2	ENST00000453977.2	416	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAAGTGTATTTGTCAA	NA	False	NA	NA	False	NA	NA	NA	24681908	24682634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24682149_24682458
transcript_143515.known	chrX	+	5440	37	FSM	ENSG00000101868.13	ENST00000379059.7	5440	37	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	31.0530708606499	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	27	True	NA	24	True	AATAAA	-17	NA	24693946	24996986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24693987_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24733754_24733817_24735398_24735489_24737624_24737742_24739374_24739551_24741374_24741505_24742001_24742122_24743229_24743330_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
transcript_143516.known	chrX	+	2399	15	FSM	ENSG00000101868.13	ENST00000677890.1	2399	15	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_11	11.5230470035012	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATCCCGTTTTCTCTA	21	True	NA	NA	False	ATTAAA	-23	NA	24693940	24728628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781
transcript_143519.known	chrX	+	1803	12	FSM	ENSG00000101868.13	ENST00000678847.1	1803	12	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_11	11.7431182590605	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTGATAGAATGAAAATC	NA	False	NA	NA	False	TTTAAA	-19	NA	24693872	24724848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334
transcript_143520.known	chrX	-	678	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1845	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATCATGGC	NA	False	NA	-58	True	NA	NA	NA	24789069	24788391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24788400_24789100
transcript_143528.known	chrX	-	1813	2	FSM	ENSG00000169297.8	ENST00000378970.5	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGGGTTTAAGTAAGGC	-1	True	NA	NA	False	AATAAA	-40	NA	30309390	30304205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_30304824_30308195
transcript_143529.nnic	chrX	-	596	2	NNC	ENSG00000169297.8	novel	1813	2	NA	NA	-69	-262	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAGAGTATTTTTGTAT	NA	False	NA	-7	True	AATAAA	-18	NA	30309459	30304467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_30304824_30309219
transcript_143534.known	chrX	+	4515	21	FSM	ENSG00000198814.14	ENST00000427190.6	4515	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	13.9481181526398	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGAATTTGTAAATCA	14	True	NA	NA	False	AATAAA	-16	NA	30653422	30731462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_143537.known	chrX	+	3638	20	FSM	ENSG00000198814.14	ENST00000378946.7	3638	20	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_19	22.3476683917691	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	535	False	NA	NA	False	AATAAA	-18	NA	30653358	30730608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30728731
transcript_143538.known	chrX	+	3707	20	FSM	ENSG00000198814.14	ENST00000378943.7	3707	20	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	20.8200308407679	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	535	False	NA	NA	False	AATAAA	-18	NA	30653358	30730608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_143545.nic	chrX	+	943	8	ISM	ENSG00000198814.14	ENST00000378945.7	2063	19	-107	32440	12	68	5prime_fragment	FALSE	canonical	3	85	junction_6	11.1080041007393	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAACAAAAAAAAACCTAAT	547	False	NA	NA	False	AAAACA	-38	NA	30653370	30696730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616
transcript_143550.known	chrX	+	565	6	FSM	ENSG00000198814.14	ENST00000487652.5	565	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	35.9310450724718	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGATCTATGGCCTAAT	91	False	NA	NA	False	NA	NA	NA	30653499	30696662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616
transcript_143551.known	chrX	+	458	5	FSM	ENSG00000198814.14	ENST00000378941.4	458	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	47.6149923868523	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTATAAAGTACTTGT	12	False	NA	NA	False	ATTAAA	-21	NA	30653537	30678114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30677993
transcript_143552.nic	chrX	+	894	4	ISM	ENSG00000198814.14	ENST00000378941.4	458	5	-167	272	12	-272	5prime_fragment	FALSE	canonical	3	103	junction_1	7.25718035235908	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACACATGCAG	547	False	NA	NA	False	AAAAAG	-5	NA	30653370	30677842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374
transcript_143555.known	chrX	-	4645	17	FSM	ENSG00000198947.18	ENST00000378723.7	4645	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	8.84943501021393	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGGACTGCAGTACTT	3	True	NA	NA	False	AATAAA	-27	NA	31266952	31119218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31177931_31177971_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_143556.known	chrX	-	1400	9	FSM	ENSG00000198947.18	ENST00000681654.1	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	6.86931583201704	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTAATTGCCTTA	-8	True	NA	NA	False	NA	NA	NA	31266963	31178421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_143557.known	chrX	-	2689	3	FSM	ENSG00000198947.18	ENST00000681870.1	2689	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTCCCGGAGTACCGG	3	True	NA	NA	False	AATAAA	-16	NA	31266952	31237711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_31240196_31260954_31261017_31266809
transcript_143558.known	chrX	+	994	3	FSM	ENSG00000233928.7	ENST00000654494.2	1062	3	68	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAGTTTGGGATAAGTT	65	False	NA	NA	False	AATAAA	-22	NA	33726459	33942731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_33726636_33853614_33853716_33942014
transcript_14356.known	chr1	+	1840	5	FSM	ENSG00000143761.16	ENST00000272102.10	1840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_1	313.435300341235	7537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCTCCAGTGCTTCCA	-6	True	NA	25	True	AATAAA	-18	NA	228082707	228099212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228082766_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_143560.known	chrX	+	616	2	FSM	ENSG00000233928.7	ENST00000659014.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATCACTCCTAGCTAT	19	False	NA	NA	False	AAAAAG	-10	NA	33726383	33853978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_33726636_33853614
transcript_143561.known	chrX	-	4040	3	FSM	ENSG00000147027.4	ENST00000275954.4	4040	3	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	1	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTTGAATTTGTGTCG	-1	True	NA	-9	True	AATAAA	-21	NA	34657285	34627074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_34630492_34639246_34639388_34656803
transcript_143562.known	chrX	+	1667	2	FSM	ENSG00000189023.10	ENST00000399985.1	1667	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAAATATTTGGAATAAA	455	False	NA	NA	False	NA	NA	NA	35798790	35803735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_35798853_35802130
transcript_143563.known	chrX	-	391	1	FSM	ENSG00000233921.2	ENST00000419621.2	391	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGTAATACATATTTACA	28	False	NA	NA	False	AAAACA	-35	NA	36375183	36374792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_36374800_36375200
transcript_143565.known	chrX	+	1663	4	FSM	ENSG00000130962.18	ENST00000463135.1	1663	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	20.8326666559997	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTCCAGTTGATGC	49	False	NA	NA	False	AATAAA	-21	NA	37349378	37442224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37440790
transcript_143568.known	chrX	+	4400	4	FSM	ENSG00000130962.18	ENST00000378628.9	4400	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	5.09901951359278	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTTCTGCCATG	34	True	NA	25	True	AATAAA	-18	NA	37349363	37457291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37453135
transcript_14357.known	chr1	+	712	4	FSM	ENSG00000143761.16	ENST00000470670.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_1	319.779090415034	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCACTCCTCTTGCCCT	16	True	NA	NA	False	NA	NA	NA	228082729	228098027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228082766_228097077_228097453_228097590_228097716_228097851
transcript_143576.nnic	chrX	-	546	3	Antisense	novelGene_ENSG00000250349.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTGTTTTCTTTTATT	1861	False	NA	NA	False	AATGAA	-40	NA	37460964	37454910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_37455108_37458954_37459053_37460713
transcript_143579.nnic	chrX	-	449	2	Antisense	novelGene_ENSG00000250349.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTTTTCTTTTATTT	1861	False	NA	NA	False	AATGAA	-41	NA	37460964	37454909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_37455108_37460713
transcript_143581.known	chrX	-	920	6	FSM	ENSG00000165169.11	ENST00000378581.7	920	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	38.8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGGGCAACCACCCC	108	False	NA	NA	False	NA	NA	NA	37847514	37836756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_37837360_37840612_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_143584.known	chrX	-	719	5	FSM	ENSG00000165169.11	ENST00000432389.2	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	37.7392368762274	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAATTTGTCAGTGTAT	214	False	NA	-5	True	ACTAAA	-24	NA	37847408	37840542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847042
transcript_143585.known	chrX	-	2151	5	FSM	ENSG00000165169.11	ENST00000378578.9	2151	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	10.256095748383	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	-1	True	NA	0	True	AATAAA	-21	NA	37847571	37838835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_143599.known	chrX	-	1846	10	FSM	ENSG00000101955.15	ENST00000378533.4	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	8.90415355984408	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	-2	True	NA	0	True	AATAAA	-21	NA	38220871	38149338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
transcript_143600.known	chrX	-	3053	19	FSM	ENSG00000156313.15	ENST00000642395.2	3053	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	9.85199108784928	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGATAAGTATTAATAAA	-1	True	NA	NA	False	AATAAA	-27	NA	38327509	38269162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_143604.known	chrX	-	2532	18	FSM	ENSG00000156313.15	ENST00000645124.1	2532	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.3039182088184	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGTGTGACCAGTTT	5	True	NA	NA	False	TTTAAA	-32	NA	38327503	38269496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_143607.nic	chrX	-	2284	16	ISM	ENSG00000156313.15	ENST00000642395.2	3053	19	-58	7431	-23	-3164	5prime_fragment	FALSE	canonical	3	24	junction_14	8.58836422143356	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGGTATGATGATAGA	-2	True	NA	-2	True	AAAACA	-45	NA	38327567	38276593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_143609.known	chrX	-	4733	15	FSM	ENSG00000156313.15	ENST00000645032.1	4733	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	8.59550190862782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCAGAAATTCTTTAT	-1	True	NA	NA	False	AATAAA	-13	NA	38327509	38284407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_143611.nic	chrX	-	1399	9	ISM	ENSG00000156313.15	ENST00000645032.1	4733	15	-58	16699	-23	-2137	5prime_fragment	FALSE	canonical	3	24	junction_7	9.8035389018456	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATGTCAGACATTATG	-2	True	NA	NA	False	AATAAA	-19	NA	38327567	38301106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_143613.nic	chrX	-	889	6	ISM	ENSG00000156313.15	ENST00000647261.1	1325	9	-23	13645	-23	0	5prime_fragment	FALSE	canonical	3	24	junction_4	11.7813411800185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTCTGGTTCTATAG	-2	True	NA	NA	False	ATTAAA	-16	NA	38327567	38317245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_143617.known	chrX	+	1742	8	FSM	ENSG00000156298.13	ENST00000378482.7	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	24.7839645327212	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCTGGTTCTGTTC	0	True	NA	NA	False	AATAAA	-18	NA	38561541	38688918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38561628_38666120_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
transcript_143618.known	chrX	+	1683	7	FSM	ENSG00000156298.13	ENST00000419600.3	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	19.5675468285856	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTCTGGTTCTGTTCTT	4487	False	NA	NA	False	AATAAA	-20	NA	38666095	38688920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
transcript_143619.nnic	chrX	-	417	2	NNC	ENSG00000287729.1	novel	1223	2	NA	NA	6399	-277	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATAAAATACTTGAAAAG	9868	False	NA	NA	False	AATAAA	-25	NA	38794279	38779860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_38780157_38794158
transcript_143622.known	chrX	+	1812	2	FSM	ENSG00000165175.17	ENST00000457894.5	1812	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACAAGCGTCTGGTCCT	3	True	NA	-59	True	AATAAA	-22	NA	38801439	38806446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38801488_38804682
transcript_143623.known	chrX	+	3781	3	FSM	ENSG00000165175.17	ENST00000614558.3	3758	3	-27	4	-8	-4	multi-exon	FALSE	canonical	3	18	junction_1	208.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAATTTTGTGTTCT	-5	True	NA	23	True	AATAAA	-25	NA	38801431	38806528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38801488_38802534_38804414_38804682
transcript_143624.known	chrX	-	376	2	FSM	ENSG00000238123.1	ENST00000436893.1	376	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGATGGCTCATGCAC	264	False	NA	NA	False	NA	NA	NA	38803883	38801567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_38801793_38803732
transcript_143625.known	chrX	+	4814	2	FSM	ENSG00000165175.17	ENST00000336949.7	4814	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTCTCTCTGGTAT	-8	True	NA	32	True	AATAAA	-34	NA	38801454	38806537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38804414_38804682
transcript_143628.nnic	chrX	+	397	2	FSM	ENSG00000289068.1	ENST00000688474.1	357	2	-40	0	-40	0	multi-exon	FALSE	canonical	2	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGTGGTATTTTGTTA	NA	False	NA	5	True	AATAAA	-16	NA	39653209	39671314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_39653462_39671169
transcript_143630.known	chrX	+	465	1	FSM	ENSG00000214047.4	ENST00000442125.2	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGATGTCTGCCCGCTC	NA	False	NA	NA	False	NA	NA	NA	39865423	39865888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_39865400_39865900
transcript_143633.known	chrX	-	6011	13	FSM	ENSG00000183337.18	ENST00000427012.3	6011	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	46.8401537145215	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTATATTTTACAAAAA	5611	False	NA	25	True	AGTAAA	-13	NA	40077929	40051311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063953_40064335_40064600_40070972_40071160_40072348_40075181_40076453_40076533_40077843
transcript_143634.known	chrX	-	6910	15	FSM	ENSG00000183337.18	ENST00000378444.9	6910	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	39.6883908384673	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTACCTTGTGTCCCA	0	True	NA	-7	True	AATAAA	-22	NA	40097958	40051250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_40052401_40053885_40054043_40054255_40054334_40055367_40055514_40057154_40057322_40062138_40062394_40062745_40063072_40063607_40063953_40064335_40064600_40070972_40071160_40071636_40071691_40072348_40075181_40076453_40076533_40077843_40077970_40097214
transcript_143636.nic	chrX	-	1853	4	ISM	ENSG00000183337.18	ENST00000342274.8	6390	15	-32	22640	-32	-1982	5prime_fragment	FALSE	canonical	2	7	junction_3	60.9717603120949	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTCCTCCAGGAAATGG	NA	False	NA	NA	False	AAGAAA	-3	NA	40177361	40073887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_40075181_40076453_40076533_40077843_40077970_40177006
transcript_143637.nnic	chrX	-	606	2	Intergenic	novelGene_86	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	904	False	NA	0	True	AATAAA	-21	NA	40145725	40144528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_40144907_40145497
transcript_143638.nnic	chrX	-	614	2	Genic_Genomic	ENSG00000183337.18	novel	288	2	NA	NA	-51	-66685	multi-exon	FALSE	canonical	1	5	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	0	True	AATAAA	-21	NA	40146680	40144528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chrX_-_40144907_40146444
transcript_143639.nnic	chrX	-	597	2	NNC	ENSG00000183337.18	novel	288	2	NA	NA	-57	-66685	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	0	True	AATAAA	-21	NA	40146686	40144528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_40144907_40146467
transcript_143640.nnic	chrX	-	692	2	NNC	ENSG00000183337.18	novel	6338	14	NA	NA	9	-66685	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	0	True	AATAAA	-21	NA	40177320	40144528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_40144907_40177006
transcript_143645.known	chrX	+	1877	8	FSM	ENSG00000182220.15	ENST00000636251.1	1877	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	399.785554761448	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGATGATTCCAAA	3	True	NA	11	True	NA	NA	NA	40580969	40606617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_143647.known	chrX	+	1648	6	FSM	ENSG00000182220.15	ENST00000637482.1	1648	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	453.796870857436	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATGATGATTCCAAATT	3	True	NA	13	True	AATAAA	-1	NA	40580969	40606619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40591233_40591366_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_143649.known	chrX	+	1995	9	FSM	ENSG00000182220.15	ENST00000635774.1	1995	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	314.430338071885	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAATATTAAGTGGAAG	-30	True	NA	-67	True	NA	NA	NA	40580936	40606539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598651_40598735_40599591_40599742_40600761_40600882_40605560
transcript_143650.known	chrX	+	2125	10	FSM	ENSG00000182220.15	ENST00000636639.1	2125	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	393.776617756004	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAATGATGATTCCAAAT	-27	True	NA	12	True	NA	NA	NA	40580939	40606618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40598935_40599019_40599591_40599742_40600761_40600882_40605560
transcript_143651.known	chrX	+	1904	8	FSM	ENSG00000182220.15	ENST00000636287.1	1904	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	413.962041047934	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCATTGCAGTACTA	31	True	NA	31	True	AATAAA	-19	NA	40580997	40606637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_143653.known	chrX	-	520	5	FSM	ENSG00000180182.11	ENST00000482034.5	520	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	106.189688764964	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCGGCTTGTAACCACA	23	True	NA	NA	False	AAAACA	-33	NA	40735858	40713831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735721
transcript_143656.known	chrX	+	900	2	FSM	ENSG00000234636.2	ENST00000456333.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATGGGTCATTTA	NA	False	NA	8	True	GATAAA	-21	NA	40735399	40738701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40735791_40738192
transcript_143662.known	chrX	+	2129	1	FSM	ENSG00000215301.11	ENST00000622373.1	2129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAATAAAAATAAAAA	448	False	NA	NA	False	NA	NA	NA	41334609	41336738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_41334600_41336700
transcript_143663.known	chrX	+	4554	17	FSM	ENSG00000215301.11	ENST00000646319.1	4554	17	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_15	124.970605918952	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	13	False	NA	22	True	AATAAA	-19	NA	41334174	41350209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_143664.known	chrX	+	4649	16	FSM	ENSG00000215301.11	ENST00000646940.1	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_14	62.7008417451916	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCTTTGTTGTTGTCA	0	True	NA	18	True	AATAAA	-15	NA	41334161	41350205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347311_41347452_41347639
transcript_143666.known	chrX	-	564	5	FSM	ENSG00000147044.23	ENST00000644770.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	109.355784026269	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCTGTGTTTTTGTACTG	621	False	NA	0	True	AATAAA	-19	NA	41923012	41743552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_41743737_41745523_41745602_41787177_41787284_41853114_41853228_41922929
transcript_143667.known	chrX	-	342	4	FSM	ENSG00000147044.23	ENST00000468986.7	342	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	26.3185612575358	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTCAAGTTGAAAATAAAAA	686	False	NA	NA	False	NA	NA	NA	41922947	41745496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_41745602_41787177_41787284_41853114_41853228_41922929
transcript_143668.known	chrX	-	821	5	FSM	ENSG00000147044.23	ENST00000642361.2	821	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	110.765518100174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTTGCTGTTATGTCC	NA	False	NA	NA	False	AGTAAA	-16	NA	41853193	41697610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_41698096_41739383_41739457_41745523_41745602_41787177_41787284_41853114
transcript_143669.known	chrX	+	387	1	FSM	ENSG00000229822.2	ENST00000451332.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATATATACTTACA	NA	False	NA	NA	False	AAAACA	-35	NA	41748221	41748608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_41748200_41748600
transcript_143670.known	chrX	+	3931	15	FSM	ENSG00000189221.11	ENST00000338702.4	3931	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	5.22161910928487	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTCGACTCCTGTAT	-4	True	NA	36	True	AATAAA	-19	NA	43656298	43746817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_43656415_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
transcript_143675.known	chrX	-	1719	3	FSM	ENSG00000124479.11	ENST00000642620.1	1719	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACTGTTTAAGTATTT	0	True	NA	4	True	AATAAA	-17	NA	43973390	43948775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_43950027_43958471_43958853_43973303
transcript_143677.known	chrX	-	3257	15	FSM	ENSG00000183690.13	ENST00000420999.2	3257	15	0	0	0	0	multi-exon	TRUE	non_canonical	2	12	junction_10	4.1057451037714	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTAAGAAGTCTATC	-26	True	NA	NA	False	ATTAAA	-26	NA	44343672	44147871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_44148897_44163921_44164028_44176291_44176385_44178366_44178565_44229648_44229780_44232480_44232678_44235304_44235448_44242120_44242290_44248271_44248411_44248802_44248917_44250193_44250446_44261074_44261299_44272685_44272837_44312567_44312757_44343546
transcript_143686.known	chrX	-	1054	5	FSM	ENSG00000069509.6	ENST00000378045.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	31.4195400984801	1041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTTTTATGTTGTTT	-8	True	NA	-4	True	ATTAAA	-33	NA	44542859	44523638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542804
transcript_143693.nnic	chrX	+	944	4	NNC	ENSG00000229491.5	novel	717	4	NA	NA	-19561	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	2.05480466765633	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTTTATTGTTTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	45300896	45333917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_45300977_45325107_45325219_45325492_45325602_45333273
transcript_143695.nnic	chrX	+	1458	4	NNC	ENSG00000229491.5	novel	717	4	NA	NA	-19554	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	2.05480466765633	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTTTATTGTTTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	45300903	45333917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_45301498_45325107_45325219_45325492_45325602_45333273
transcript_143696.nnic	chrX	+	1077	3	NNC	ENSG00000229491.5	novel	717	4	NA	NA	-19805	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTTTATTGTTTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	45300652	45333917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_45300977_45325492_45325602_45333273
transcript_143697.nnic	chrX	+	1355	3	NNC	ENSG00000229491.5	novel	717	4	NA	NA	-19562	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTTTATTGTTTTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	45300895	45333917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_45301498_45325492_45325602_45333273
transcript_143699.nnic	chrX	+	2263	2	Intergenic	novelGene_87	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTAAAAATAAGAGGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	45300863	45318577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_+_45300977_45316427
transcript_14370.known	chr1	-	665	6	FSM	ENSG00000162910.19	ENST00000391867.8	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	321.663177873999	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-16	True	NA	-7	True	NA	NA	NA	228109299	228106686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436_228108475_228108954_228109022_228109260
transcript_143702.nnic	chrX	+	2792	2	Intergenic	novelGene_88	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTACCGGGGCCCAAA	NA	False	NA	NA	False	AATAAA	-13	NA	45300899	45318621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_+_45301498_45316427
transcript_143703.known	chrX	-	689	2	FSM	ENSG00000231566.3	ENST00000666464.2	692	2	3	0	3	0	multi-exon	FALSE	canonical	3	11	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTGGCTGGGTGTGG	12	True	NA	NA	False	NA	NA	NA	45851532	45848962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_45849473_45851353
transcript_143709.known	chrX	-	965	3	FSM	ENSG00000236751.3	ENST00000670979.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTAGTGAGTCCTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	46327680	46314044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46314167_46325741_46326455_46327550
transcript_143712.known	chrX	+	993	7	FSM	ENSG00000147121.16	ENST00000377919.6	993	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	30.2071551494381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCTGCATATTAAATT	1	True	NA	NA	False	AATAAA	-18	NA	46447293	46472526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46471141_46471186_46472024
transcript_143716.known	chrX	+	1354	6	FSM	ENSG00000147121.16	ENST00000298190.10	1354	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	17.7426040929735	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGAGTCTTGCTC	-1	True	NA	NA	False	NA	NA	NA	46447291	46473669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46472749
transcript_143719.known	chrX	+	730	6	FSM	ENSG00000147121.16	ENST00000478600.5	730	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	27.6810404428735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCACAATCATAGTGGAAG	4	True	NA	NA	False	AAAACA	-42	NA	46447296	46497422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46497121
transcript_143720.known	chrX	+	2334	6	FSM	ENSG00000147121.16	ENST00000344302.9	2334	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	19.5140974682407	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	4	True	NA	15	True	AATAAA	-16	NA	46447296	46474639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
transcript_143725.known	chrX	+	585	5	FSM	ENSG00000147121.16	ENST00000476762.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	9.65336728815391	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCCTGGCCGCCGG	4	True	NA	NA	False	NA	NA	NA	46447296	46463449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197
transcript_143727.known	chrX	+	1247	6	FSM	ENSG00000147121.16	ENST00000487081.1	1247	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.6459798443851	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGATGAAATTTTGCA	915	False	NA	87	True	CATAAA	-26	NA	46448232	46473594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46471141_46471186_46472752
transcript_143732.known	chrX	-	591	6	FSM	ENSG00000251192.8	ENST00000522017.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.70744091837593	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTCCAGATGGCATCC	NA	False	NA	NA	False	NA	NA	NA	46545457	46522999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46523126_46528349_46528446_46528782_46528910_46542072_46542117_46544500_46544612_46545370
transcript_143737.nnic	chrX	+	530	3	NNC	ENSG00000230844.3	novel	672	3	NA	NA	6	-172	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	36	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGCTTCTTAAATATG	4	True	NA	NA	False	AATAAA	-19	NA	46545516	46548236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_46545628_46546465_46546641_46547992
transcript_143740.known	chrX	+	2078	2	FSM	ENSG00000230844.3	ENST00000421685.2	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTGTGAAAATACTT	124	False	NA	-46	True	AATATA	-20	NA	46545492	46548408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46545628_46546465
transcript_143742.known	chrX	-	493	6	FSM	ENSG00000251192.8	ENST00000518708.1	493	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.2687759489278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCCTCGGCCTCCCAAA	-19	True	NA	NA	False	NA	NA	NA	46545424	46525377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46525439_46528349_46528446_46528782_46528910_46542072_46542117_46544500_46544612_46545370
transcript_143748.nnic	chrX	+	645	3	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	672	3	NA	NA	-5	-307	multi-exon	FALSE	canonical	3	27	junction_1	5.5	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGGGCAGTATTGTT	-7	True	NA	13	True	ATTAAA	-28	NA	46545505	46598189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_143749.nnic	chrX	+	856	3	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	672	3	NA	NA	-5	-96	multi-exon	FALSE	canonical	3	27	junction_1	5.5	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGATTTGTTTTGTTT	-7	True	NA	21	True	ATTAAA	-21	NA	46545505	46598400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_143751.nnic	chrX	+	852	2	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	2566	2	NA	NA	-21	-96	multi-exon	FALSE	canonical	1	3	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGATTTGTTTTGTTT	48	False	NA	21	True	ATTAAA	-21	NA	46545416	46598400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chrX_+_46545628_46597759
transcript_143752.known	chrX	+	2396	2	FSM	ENSG00000147119.4	ENST00000276055.4	2396	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGGGTTTAAGAATTT	-16	True	NA	117	True	AAGAAA	-4	NA	46573764	46598496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46575424_46597759
transcript_143754.known	chrX	-	9971	17	FSM	ENSG00000065923.10	ENST00000616978.5	9971	17	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_9	7.11045664848609	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGCTCATTCATTTGCTT	17	True	NA	-20	True	AATAAA	-16	NA	46759118	46599250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588_46635649_46643235_46643390_46648685_46648798_46651109_46651224_46651315_46651405_46653608_46653715_46662015_46662158_46662537_46662644_46669606_46669720_46672550_46672628_46679677_46679756_46682335_46682536_46758704
transcript_143755.known	chrX	-	705	6	FSM	ENSG00000065923.10	ENST00000464933.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.8220133649053	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATAGTGTTATACTCT	2383	False	NA	-3	True	CATAAA	-30	NA	46635634	46606260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46606371_46606907_46607204_46613288_46613395_46620976_46621060_46631585_46631650_46635588
transcript_143757.known	chrX	+	3700	5	FSM	ENSG00000102218.6	ENST00000218340.4	3700	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	9.36416040016402	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAATGGTTTGTATA	0	True	NA	101	True	AATAAA	-18	NA	46837042	46882358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46837203_46853475_46854142_46859987_46860103_46877504_46877591_46879685
transcript_143759.known	chrX	-	521	4	FSM	ENSG00000204904.7	ENST00000377879.7	521	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATATCAGAAGAAAATTTAA	NA	False	NA	NA	False	AATAAA	-20	NA	46899703	46887416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46887693_46890292_46890380_46894523_46894582_46899603
transcript_143760.known	chrX	+	4947	11	FSM	ENSG00000102221.14	ENST00000614628.5	4947	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	14.8016890928029	651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTCAGTGTGTTTTT	-24	True	NA	15	True	ATTAAA	-16	NA	46912420	47061242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46912720_46984883_46984941_46985712_46985793_46998119_46998278_47024723_47024915_47027891_47028104_47033620_47033789_47038948_47039066_47054157_47054629_47056081_47056200_47058166
transcript_143762.known	chrX	+	2168	8	FSM	ENSG00000130988.13	ENST00000397180.6	2168	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.80036013452109	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCCTTTTTATTT	-2	True	NA	26	True	AATAAA	-20	NA	47078442	47093313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47078710_47080316_47080937_47081129_47081308_47084417_47084601_47089775_47089992_47091677_47091810_47092060_47092216_47092896
transcript_143763.known	chrX	+	1611	7	FSM	ENSG00000130988.13	ENST00000352078.8	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.61743318211757	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCCTTTTTATTT	21	False	NA	26	True	AATAAA	-20	NA	47078379	47093313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47078710_47081129_47081308_47084417_47084601_47089775_47089992_47091677_47091810_47092060_47092216_47092896
transcript_143764.known	chrX	+	2041	7	FSM	ENSG00000130988.13	ENST00000457380.5	2041	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.79256129077161	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTTCCTTTTTATTTT	-4	True	NA	27	True	AATAAA	-21	NA	47078354	47093314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47078710_47080316_47080937_47081129_47081308_47084417_47084601_47091677_47091810_47092060_47092216_47092896
transcript_143765.nic	chrX	+	1551	6	NIC	ENSG00000130988.13	novel	2041	7	NA	NA	-136	0	combination_of_known_junctions	TRUE	canonical	2	7	junction_2	4.48998886412873	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTATTATGTTCCTTTT	NA	False	NA	21	True	AATAAA	-15	NA	47078218	47093308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47078710_47081129_47081308_47084417_47084601_47091677_47091810_47092060_47092216_47092896
transcript_143776.known	chrX	-	586	3	FSM	ENSG00000147123.12	ENST00000377811.4	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	289.5	17081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	1	True	NA	-6	True	ATTAAA	-17	NA	47144702	47142215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47142441_47142613_47142745_47144472
transcript_143777.known	chrX	-	948	3	FSM	ENSG00000147123.12	ENST00000687244.1	1525	3	428	149	-328	-4	multi-exon	FALSE	canonical	3	681	junction_1	791.5	7838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGCTAGTGTTGATT	455	False	NA	-10	True	ATTAAA	-13	NA	47145038	47142219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47142441_47142583_47142745_47144472
transcript_143779.known	chrX	+	3397	24	FSM	ENSG00000182872.16	ENST00000377604.8	3397	24	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_10	56.9662786199956	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	6	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_143781.known	chrX	+	3105	23	FSM	ENSG00000182872.16	ENST00000628161.2	3105	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	76.6695307286327	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	15	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_14379.known	chr1	-	722	5	FSM	ENSG00000162910.19	ENST00000336300.9	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	338.238451391914	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-23	True	NA	1	True	NA	NA	NA	228109306	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109148
transcript_143795.known	chrX	+	3466	26	FSM	ENSG00000130985.17	ENST00000377351.8	3466	26	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	233.891003674789	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	10	True	NA	-34	True	AATAAA	-17	NA	47190860	47215128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47190951_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_143798.known	chrX	+	3572	26	FSM	ENSG00000130985.17	ENST00000335972.11	3572	26	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	201.537037787103	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	3	True	NA	-34	True	AATAAA	-17	NA	47193828	47215128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_1438.known	chr1	+	905	5	FSM	ENSG00000175279.22	ENST00000309048.8	905	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	65.8046350951056	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGGTTACTAATGT	-26	True	NA	15	True	AATAAA	-15	NA	10430432	10442808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_14380.known	chr1	-	603	5	FSM	ENSG00000162910.19	ENST00000366747.7	603	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	340.068375477638	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109260
transcript_143805.known	chrX	+	2497	10	FSM	ENSG00000130985.17	ENST00000377269.3	2497	10	0	0	0	0	multi-exon	FALSE	canonical	3	1108	junction_3	111.127665433462	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCGCCTGCCCTGCTGG	2173	False	NA	-36	True	AATAAA	-15	NA	47208561	47215126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_14381.known	chr1	-	726	5	FSM	ENSG00000162910.19	ENST00000366744.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	372.159240111004	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	3	True	NA	1	True	NA	NA	NA	228109280	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108440_228108509_228109148
transcript_143818.known	chrX	+	1054	9	FSM	ENSG00000130985.17	ENST00000442035.5	1054	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	369.397799634757	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGCGACCATGGGGG	3	True	NA	NA	False	NA	NA	NA	47193828	47201610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47194025_47198308_47198356_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477
transcript_143822.known	chrX	+	3158	16	FSM	ENSG00000102225.17	ENST00000457458.6	3158	16	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	206.42282388879	1167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	29	False	NA	28	True	ATTAAA	-17	NA	47218232	47229997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47218665_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_143828.known	chrX	+	3196	21	FSM	ENSG00000102226.10	ENST00000377107.7	3196	21	0	0	0	0	multi-exon	TRUE	canonical	3	605	junction_7	60.3817853329959	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCAGTGTGGTTTTTTC	-8	True	NA	35	True	TATAAA	-19	NA	47233008	47248328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_143844.known	chrX	-	4297	5	FSM	ENSG00000147124.13	ENST00000313116.11	4297	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	8.61321658847611	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTTTAGCATCTGTCTT	-15	True	NA	NA	False	TATAAA	-35	NA	47482585	47445878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47449475_47455920_47456017_47456271_47456399_47467409_47467761_47482458
transcript_143848.known	chrX	+	1238	1	FSM	ENSG00000196741.5	ENST00000624822.1	1238	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTG	729	False	NA	NA	False	AATAAA	-32	NA	47483570	47484808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47483600_47484800
transcript_14385.known	chr1	-	632	5	FSM	ENSG00000162910.19	ENST00000295008.8	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	248.778013497978	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109260
transcript_143851.known	chrX	+	2378	16	FSM	ENSG00000078061.14	ENST00000377045.9	2378	16	0	0	0	0	multi-exon	FALSE	non_canonical	3	252	junction_4	28.3498775227611	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGTT	8	True	NA	25	True	NA	NA	NA	47561204	47571908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251_47565351_47566638_47566781_47566883_47566912_47566985_47567132_47567229_47567433_47568717_47568895_47568986_47569034_47569538_47569658_47569892_47570025_47570877_47571013_47571322
transcript_143854.known	chrX	-	2489	9	FSM	ENSG00000126759.14	ENST00000396992.8	2489	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	3.45506874027131	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGCTTTTAGCATTT	-38	True	NA	NA	False	AGTAAA	-16	NA	47629930	47623281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47624441_47626057_47626170_47626327_47626520_47626772_47626947_47627140_47627333_47627470_47627642_47628101_47628278_47629523_47629675_47629768
transcript_143857.known	chrX	+	1271	6	FSM	ENSG00000078061.14	ENST00000377039.2	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	42.0218990527558	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTGTATGTGCATTA	25	False	NA	NA	False	AATAAA	-20	NA	47561221	47565975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251
transcript_143861.known	chrX	+	769	6	FSM	ENSG00000102265.12	ENST00000218388.9	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_4	35.6033706269505	5941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	-1	True	NA	26	True	AATAAA	-17	NA	47582435	47586789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_143870.known	chrX	+	626	5	FSM	ENSG00000102265.12	ENST00000377017.5	626	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	262.334114251273	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	13	False	NA	26	True	AATAAA	-17	NA	47582449	47586789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47582475_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_143875.known	chrX	-	688	6	FSM	ENSG00000008056.14	ENST00000639776.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	29.9933325924279	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATTTCCAATATCGTAT	6736	False	NA	-5	True	ATTAAA	-21	NA	47619387	47589954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47590210_47604977_47605068_47605222_47605380_47606944_47607037_47607140_47607199_47619351
transcript_143877.known	chrX	-	2876	7	FSM	ENSG00000126767.18	ENST00000376983.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	53.7300350517908	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	-3	True	NA	-6	True	AATATA	-16	NA	47650563	47635520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47649920_47650027_47650422
transcript_143878.known	chrX	-	2695	6	FSM	ENSG00000126767.18	ENST00000247161.7	2695	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	19.6102014268084	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	8670	False	NA	-6	True	AATATA	-16	NA	47650488	47635520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47650422
transcript_143882.known	chrX	-	773	6	FSM	ENSG00000126756.12	ENST00000335890.3	773	6	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_1	37.1892457573423	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACATGGCCCTTCTTTTT	-22	True	NA	-4	True	ATTAAA	-19	NA	47659180	47651795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829
transcript_143883.known	chrX	-	574	7	FSM	ENSG00000126756.12	ENST00000333119.7	574	7	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_6	71.746467199128	8419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACATGGCCCTTCTTT	-3	True	NA	-6	True	ATTAAA	-17	NA	47659161	47651797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
transcript_143884.known	chrX	-	627	5	FSM	ENSG00000126756.12	ENST00000485641.5	627	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	227.925837719202	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCACATGGCCCTTC	3	True	NA	-9	True	ATTAAA	-14	NA	47659107	47651800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657781_47657864_47658829
transcript_143885.known	chrX	-	476	3	FSM	ENSG00000126756.12	ENST00000460840.5	476	3	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_1	34.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCACATGGCCCTTC	4800	False	NA	-9	True	ATTAAA	-14	NA	47657499	47651800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47651896_47652080_47652145_47657182
transcript_143889.nnic	chrX	-	736	4	Antisense	novelGene_ENSG00000188459.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_3	1.4142135623731	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCTTGCTTCCTAGTT	NA	False	NA	NA	False	AATAAA	-25	NA	47806841	47803098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_47803422_47803975_47804155_47804583_47804725_47806748
transcript_14389.known	chr1	-	565	4	FSM	ENSG00000162910.19	ENST00000366746.7	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	343.321359014489	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-16	True	NA	1	True	NA	NA	NA	228109299	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109260
transcript_143892.nnic	chrX	-	780	4	Antisense	novelGene_ENSG00000188459.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.29983164553722	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCTTGCTTCCTAGTT	NA	False	NA	NA	False	AATAAA	-25	NA	47806911	47803098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_47803422_47803975_47804155_47804609_47804725_47806748
transcript_143899.nnic	chrX	+	881	5	NIC	ENSG00000197779.15	novel	492	5	NA	NA	-22	323	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	5.76085931090146	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATTTGTAGGTATTTTC	17	True	NA	NA	False	ATTAAA	-20	NA	47836923	48002884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47837008_47846104_47846322_47887998_47888126_47895844_47895941_48002527
transcript_143901.known	chrX	+	11230	5	FSM	ENSG00000197779.15	ENST00000338637.13	11230	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	1.92028643696715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGGACATAGTTTT	-5	True	NA	16	True	AATAAA	-25	NA	47836901	47925627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47836988_47846104_47846322_47887998_47888126_47895844_47895941_47914923
transcript_143904.known	chrX	+	492	5	FSM	ENSG00000197779.15	ENST00000376950.4	492	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.62916512459885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAGGAATGAAGAAACAG	20	False	NA	NA	False	AGTAAA	-1	NA	47836969	48002561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47836988_47846104_47846322_47887998_47888126_47895844_47895941_48002527
transcript_143905.nic	chrX	+	705	4	NIC	ENSG00000197779.15	novel	11349	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8.25967446224258	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	-5	True	NA	8	True	AATAAA	-16	NA	47836944	47861045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47836988_47842649_47842769_47846104_47846322_47860719
transcript_143908.nnic	chrX	+	704	3	NIC	ENSG00000197779.15	novel	475	2	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	3	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	-1	True	NA	8	True	AATAAA	-16	NA	47836846	47861045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47837008_47846104_47846322_47860719
transcript_143909.nic	chrX	+	651	3	NIC	ENSG00000197779.15	novel	475	2	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	4	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	-27	True	NA	8	True	AATAAA	-16	NA	47836879	47861045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47836988_47846104_47846322_47860719
transcript_143910.known	chrX	+	475	2	FSM	ENSG00000197779.15	ENST00000483520.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	9223	False	NA	8	True	AATAAA	-16	NA	47846172	47861045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47846322_47860719
transcript_143912.known	chrX	-	3586	7	FSM	ENSG00000147118.12	ENST00000396965.5	3586	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	18.1444818670091	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTTTACTGTTATAG	3	True	NA	-2	True	AATAAA	-15	NA	48003978	47974851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003903
transcript_143913.known	chrX	-	3499	6	FSM	ENSG00000147118.12	ENST00000376943.8	3499	6	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_5	15.4531550176655	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	-8	True	NA	-1	True	AATAAA	-16	NA	48003989	47974850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507_48003703_48003908
transcript_143920.known	chrX	-	2455	5	FSM	ENSG00000221994.12	ENST00000409324.7	2455	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.1650635094611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTTGTTTGGTCAT	524	False	NA	0	True	AATAAA	-24	NA	48071116	48058213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071064
transcript_143921.known	chrX	-	3475	5	FSM	ENSG00000221994.12	ENST00000276054.9	3475	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	1.92028643696715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTGCAGTTCATGCA	0	True	NA	NA	False	AATAAA	-33	NA	48071640	48057515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071266
transcript_143922.known	chrX	-	988	5	FSM	ENSG00000221994.12	ENST00000428686.1	988	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2.9474565306379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTTCCTGTTCTGTGC	6	True	NA	NA	False	AAGAAA	-43	NA	48071634	48059797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071465
transcript_143923.known	chrX	+	1268	2	FSM	ENSG00000287757.2	ENST00000668079.1	1268	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTACTCTGTCCCT	-7	True	NA	NA	False	TTTAAA	-7	NA	48071225	48078721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48071527_48077754
transcript_143925.known	chrX	+	1223	8	FSM	ENSG00000126752.8	ENST00000376919.4	1223	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTTTGTTCCTCTC	9	True	NA	NA	False	AATAAA	-16	NA	48255391	48267444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48255433_48257221_48257311_48257745_48257861_48258535_48258632_48261765_48261816_48263781_48263918_48266286_48266392_48266853
transcript_143928.nic	chrX	+	959	3	ISM	ENSG00000268009.6	ENST00000595689.3	1209	8	5677	4	5677	0	3prime_fragment	FALSE	canonical	3	10	junction_1	3	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTGTTTGCATCTCTC	5675	False	NA	NA	False	AATAAA	-16	NA	48389215	48393343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48389482_48391868_48391974_48392755
transcript_143929.known	chrX	-	1278	8	FSM	ENSG00000269791.6	ENST00000595235.6	1278	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	4.53107186490106	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTGTTTGCATCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	48411960	48402081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48402670_48403451_48403557_48405943_48406080_48408064_48408115_48409977_48410074_48410749_48410865_48411303_48411393_48411861
transcript_143931.nic	chrX	-	1000	3	ISM	ENSG00000269791.6	ENST00000595235.6	1278	8	5710	0	5660	0	3prime_fragment	FALSE	canonical	3	9	junction_2	3	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTGTTTGCATCTCTC	5636	False	NA	NA	False	AATAAA	-16	NA	48406250	48402081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_48402670_48403451_48403557_48405943
transcript_143938.nic	chrX	-	1997	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	65	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_15	73.0593061986098	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	1778	False	NA	-12	True	AATAAA	-16	NA	48468492	48458543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468304
transcript_143952.known	chrX	-	708	8	FSM	ENSG00000017483.16	ENST00000416711.5	708	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	105.966109329967	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGAGGCTCCCTGGGTTG	1253	False	NA	NA	False	NA	NA	NA	48469017	48462897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468884
transcript_143955.known	chrX	+	1986	14	FSM	ENSG00000068438.15	ENST00000019019.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	114.446907667076	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	22	True	ATTAAA	-20	NA	48476160	48486299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48476397_48476562_48476669_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_143958.known	chrX	+	1899	13	FSM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	59.8198104495678	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCCATTGTAATTGT	-10	True	NA	15	True	AATATA	-26	NA	48476198	48486350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48482795_48482985_48483028_48485735
transcript_143964.nic	chrX	+	1871	13	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_9	72	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	22	True	ATTAAA	-20	NA	48476169	48486299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_143969.nic	chrX	+	2235	12	NIC	ENSG00000068438.15	novel	1899	13	NA	NA	-18	0	intron_retention	FALSE	canonical	3	160	junction_9	56.2415099194228	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	NA	False	NA	22	True	ATTAAA	-20	NA	48476002	48486299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48483028_48485735
transcript_14398.known	chr1	-	990	4	FSM	ENSG00000162910.19	ENST00000366734.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	343.791603542999	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	386	False	NA	1	True	NA	NA	NA	228108897	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436
transcript_143981.nic	chrX	+	1598	11	ISM	ENSG00000068438.15	ENST00000348411.3	1899	13	-196	3396	-18	0	5prime_fragment	FALSE	canonical	3	160	junction_9	52.9668764417914	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	NA	False	NA	33	True	TATAAA	-45	NA	48476002	48482954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
transcript_143982.nic	chrX	+	1592	11	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_9	70.2071221458336	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	NA	False	NA	33	True	TATAAA	-45	NA	48476002	48482954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
transcript_14399.known	chr1	-	738	5	FSM	ENSG00000162910.19	ENST00000336520.8	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	192.913678882551	2927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	-16	True	NA	-5	True	NA	NA	NA	228109299	228106684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109148
transcript_143993.known	chrX	+	1287	9	FSM	ENSG00000068438.15	ENST00000496365.5	1287	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	77.5693238335877	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAATTTAATATATAGTAA	2709	False	NA	-24	True	ATTAAA	-32	NA	48479037	48486311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_143994.known	chrX	+	736	6	FSM	ENSG00000068438.15	ENST00000466371.5	736	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	86.2020881417614	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	4836	False	NA	33	True	TATAAA	-45	NA	48481164	48482954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
transcript_143995.known	chrX	-	653	2	FSM	ENSG00000224292.1	ENST00000445586.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTATTTTTCACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	48508838	48506522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48507056_48508718
transcript_143997.known	chrX	+	1867	15	FSM	ENSG00000102312.24	ENST00000326194.11	1867	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	72.0768085207067	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_1440.known	chr1	+	1469	5	FSM	ENSG00000251503.8	ENST00000400900.6	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	120.640996348671	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCATGGATTATAGC	25	False	NA	NA	False	NA	NA	NA	10430101	10452153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10451376
transcript_14400.known	chr1	-	630	4	FSM	ENSG00000162910.19	ENST00000366742.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	325.924667505988	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	228	False	NA	1	True	NA	NA	NA	228109055	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108954
transcript_144005.known	chrX	+	1848	14	FSM	ENSG00000102312.24	ENST00000355961.8	1848	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	60.8783829843804	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACTGCTCAGAGG	8	True	NA	24	True	AATAAA	-23	NA	48509001	48520814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_144006.known	chrX	+	1877	14	FSM	ENSG00000102312.24	ENST00000359882.8	1877	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	69.317125627982	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	-32	True	NA	16	True	AATAAA	-15	NA	48508961	48520806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_14401.known	chr1	-	661	4	FSM	ENSG00000162910.19	ENST00000348259.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	312.292953633105	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	0	True	NA	1	True	NA	NA	NA	228109283	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109148
transcript_144011.nic	chrX	+	1919	14	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_2	52.7127978128124	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-4	True	NA	18	True	AATAAA	-17	NA	48508989	48520808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_14402.known	chr1	-	660	5	FSM	ENSG00000162910.19	ENST00000366736.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	338.847310746301	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	267	False	NA	1	True	NA	NA	NA	228109016	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108509_228108954
transcript_144022.nic	chrX	+	1769	13	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	43.0529389885935	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-8	True	NA	18	True	AATAAA	-17	NA	48508985	48520808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_144024.nic	chrX	+	2196	13	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	94	junction_1	31.959501282439	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-4	True	NA	18	True	AATAAA	-17	NA	48508989	48520808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48509104_48509423_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_14403.known	chr1	-	864	6	FSM	ENSG00000162910.19	ENST00000430433.5	864	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	286.120534041162	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTCTGTCTCCCCA	NA	False	NA	0	True	NA	NA	NA	228109312	228106679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228107976_228108085_228108234_228108319_228108954_228109022_228109148
transcript_144033.known	chrX	+	1328	10	FSM	ENSG00000102312.24	ENST00000472520.5	1328	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.2874680257366	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	-2	True	NA	18	True	AATAAA	-17	NA	48508991	48520808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48509104_48509783_48509957_48511891_48511936_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_14404.known	chr1	-	848	2	FSM	ENSG00000162910.19	ENST00000465268.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	1008	False	NA	1	True	NA	NA	NA	228108275	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667
transcript_144042.known	chrX	+	714	6	FSM	ENSG00000147155.11	ENST00000446158.5	714	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	450.898924372192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGTGCTCTACTTCCTG	14	True	NA	NA	False	GGGGCT	-39	NA	48521855	48528245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48521908_48522144_48522253_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_144045.known	chrX	+	3785	6	FSM	ENSG00000068354.16	ENST00000376771.9	3785	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	8	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCATTCTGTGATTT	10	True	NA	11	True	AGTAAA	-15	NA	48539713	48562609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48539921_48541332_48541443_48544868_48545024_48558896_48559025_48559157_48559347_48559613
transcript_144047.known	chrX	+	796	5	FSM	ENSG00000147155.11	ENST00000498425.1	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	373.276958169132	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAAGAAGAACTGAGG	-1	True	NA	NA	False	NA	NA	NA	48521804	48528439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48521908_48523753_48524073_48526988_48527026_48527154_48527286_48528233
transcript_144048.known	chrX	+	904	5	FSM	ENSG00000147155.11	ENST00000276096.10	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	381.920394192298	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	-7	True	NA	9	True	AATAAA	-10	NA	48521798	48528710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48521908_48523922_48524073_48526988_48527026_48527154_48527286_48528233
transcript_14405.known	chr1	-	1212	3	FSM	ENSG00000162910.19	ENST00000366735.5	1212	3	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_2	29.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	279	False	NA	1	True	NA	NA	NA	228109004	228106678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234
transcript_144050.nnic	chrX	+	874	5	NNC	ENSG00000147155.11	novel	1125	5	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	368.523404955506	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	-1	True	NA	15	True	AATAAA	-16	NA	48521774	48528716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_48521908_48523982_48524073_48526988_48527026_48527154_48527286_48528233
transcript_144057.known	chrX	+	1125	5	FSM	ENSG00000147155.11	ENST00000495186.6	1125	5	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	214.480039863853	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	2	True	NA	15	True	AATAAA	-16	NA	48521807	48528716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_144060.known	chrX	+	4298	7	FSM	ENSG00000102317.18	ENST00000376759.8	4298	7	0	0	0	0	multi-exon	TRUE	canonical	3	888	junction_1	77.903073680625	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCGTTTTTTTAA	-1	True	NA	17	True	AATAAA	-22	NA	48574483	48581162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_144068.known	chrX	+	724	6	FSM	ENSG00000102317.18	ENST00000489344.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	384.572801950424	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGCAATAATTGGTTCT	7	True	NA	NA	False	NA	NA	NA	48574523	48577735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48574574_48575167_48575284_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_144071.known	chrX	-	549	2	FSM	ENSG00000204620.3	ENST00000376775.3	549	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGTTTCACTGTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	48574860	48568013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48568181_48574478
transcript_144073.known	chrX	+	425	1	FSM	ENSG00000279528.1	ENST00000623114.1	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCGTTTTTTTAATGC	3702	False	NA	20	True	AATAAA	-25	NA	48580740	48581165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48580700_48581200
transcript_144074.known	chrX	+	1130	6	FSM	ENSG00000102317.18	ENST00000376755.1	1130	6	0	0	0	0	multi-exon	FALSE	canonical	3	1019	junction_1	39.261176752614	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGCATCAAGCCAGCC	-9	True	NA	NA	False	NA	NA	NA	48574951	48577868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_144079.known	chrX	+	5457	10	FSM	ENSG00000101940.18	ENST00000376729.10	5457	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	29.5614029303394	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTCGGTTAACTTG	-8	True	NA	NA	False	AATAAA	-38	NA	48597491	48608869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48597615_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_144083.nic	chrX	+	1767	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	48.9499618532241	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	7438	False	NA	26	True	NA	NA	NA	48597471	48605193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_144091.known	chrX	+	2124	9	FSM	ENSG00000101940.18	ENST00000218056.9	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	20.5669638012031	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	-8	True	NA	26	True	NA	NA	NA	48597491	48605193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_144098.known	chrX	+	1829	12	FSM	ENSG00000015285.11	ENST00000376701.5	1829	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.29844153246234	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTCTGTTTACATTCC	-18	True	NA	NA	False	AATAAA	-28	NA	48683798	48691427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48683986_48684282_48684424_48685546_48685634_48685733_48685837_48685945_48685988_48686080_48686135_48686780_48686956_48688053_48688097_48688299_48688454_48688659_48689067_48689319_48689435_48691106
transcript_144099.known	chrX	+	2736	6	FSM	ENSG00000101945.17	ENST00000376687.4	2736	6	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	10.571660229122	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATGTGAGGTGCTTGT	-13	True	NA	NA	False	AATAAA	-22	NA	48696733	48709016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48696804_48698901_48699048_48700090_48700754_48706264_48706412_48706497_48706628_48707436
transcript_14410.known	chr1	+	1065	9	FSM	ENSG00000143774.17	ENST00000492871.5	1065	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	534.98257857149	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAATGAGTGGAATG	-3	True	NA	NA	False	AATAAA	-20	NA	228140289	228148946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_144100.known	chrX	+	740	4	FSM	ENSG00000171433.12	ENST00000303227.11	740	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGTCTTCGTTACTGT	-5	True	NA	NA	False	AATAAA	-20	NA	48761746	48773648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48761854_48765834_48765973_48770926_48771083_48773309
transcript_144101.known	chrX	+	1239	5	FSM	ENSG00000102145.15	ENST00000651144.1	1239	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAGTCCTGAAATTGTGG	NA	False	NA	NA	False	AATAAA	-5	NA	48786561	48794297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48786646_48791843_48792222_48792322_48792469_48793171_48793298_48793792
transcript_144102.known	chrX	+	4118	29	FSM	ENSG00000094631.21	ENST00000334136.11	4118	29	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	31.6829599150646	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	1	True	NA	14	True	AATAAA	-19	NA	48802066	48824976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_144105.known	chrX	+	907	8	FSM	ENSG00000094631.21	ENST00000376643.6	907	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	51.7348025599631	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACTCTACAGCATTTG	308	False	NA	NA	False	GGGGCT	-30	NA	48801699	48806706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48801945_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
transcript_144106.nic	chrX	+	1032	8	ISM	ENSG00000094631.21	ENST00000334136.11	4118	29	-41	18017	-8	0	5prime_fragment	FALSE	canonical	3	73	junction_1	32.6577802712447	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGGTGTACATTTTT	-40	True	NA	14	True	AATAAA	-16	NA	48802025	48806959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
transcript_144109.nic	chrX	+	1023	8	ISM	ENSG00000094631.21	ENST00000644068.1	4147	29	-3	18017	-3	0	5prime_fragment	FALSE	canonical	3	26	junction_1	48.3372506036325	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGGTGTACATTTTT	-23	True	NA	14	True	AATAAA	-16	NA	48802164	48806959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
transcript_144110.known	chrX	+	583	7	FSM	ENSG00000094631.21	ENST00000423941.5	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	70.2908639551084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTCACAGGTGAAGGCTT	-15	True	NA	NA	False	NA	NA	NA	48801376	48805661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48801432_48801873_48801945_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_144119.known	chrX	+	591	6	FSM	ENSG00000094631.21	ENST00000441703.6	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	53.3981273079871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCATGGTCTCT	-2	True	NA	NA	False	NA	NA	NA	48802185	48805745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_14412.known	chr1	+	937	8	FSM	ENSG00000143774.17	ENST00000366730.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	466.048871922686	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGGTGACCCCCGAC	NA	False	NA	NA	False	NA	NA	NA	228139961	228148840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140160_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_144120.known	chrX	+	1999	6	FSM	ENSG00000094631.21	ENST00000462730.5	1999	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	54.17896270694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATTTCATTGATTCTAA	-50	True	NA	1	True	AATAAA	-3	NA	48802015	48806946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_144126.known	chrX	+	826	2	FSM	ENSG00000187682.2	ENST00000636362.1	826	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCATTTGACATGAGAC	3141	False	NA	NA	False	AAGAAA	-28	NA	48826512	48829869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48826550_48829080
transcript_144127.known	chrX	-	1025	3	FSM	ENSG00000102109.9	ENST00000218230.6	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	31	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCTTGTCTGTGTG	-22	True	NA	-8	True	AATAAA	-15	NA	48835610	48831095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48831456_48831868_48832342_48835418
transcript_144130.known	chrX	+	965	7	FSM	ENSG00000102103.18	ENST00000396763.6	962	7	-4	1	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	142.771865420171	2123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	22	False	NA	24	True	AATAAA	-25	NA	48898255	48903142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898347_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_144136.known	chrX	-	804	6	FSM	ENSG00000126768.12	ENST00000472645.1	804	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	378.18175524475	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTCAGGGCACCCCA	562	False	NA	-108	True	NA	NA	NA	48897228	48893553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897092
transcript_144140.nnic	chrX	-	750	5	NIC	ENSG00000126768.12	novel	950	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	43	junction_4	397.31811876631	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGGACTCCTTGAAC	NA	False	NA	-3	True	TTTAAA	-18	NA	48897800	48893448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48897723
transcript_144149.known	chrX	-	964	7	FSM	ENSG00000126768.12	ENST00000465150.6	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	401.362851904469	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	5	True	NA	-1	True	TTTAAA	-20	NA	48897762	48893446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
transcript_14415.known	chr1	+	656	8	FSM	ENSG00000143774.17	ENST00000453943.5	656	8	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	190.486594953931	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGCTTGCTGTCTGT	5	True	NA	NA	False	AAGAAA	-16	NA	228140297	228148691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_144150.known	chrX	-	939	7	FSM	ENSG00000126768.12	ENST00000495490.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	418.644538958769	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGTGGACTCCTT	0	True	NA	-7	True	TTTAAA	-14	NA	48897790	48893452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895455_48896758_48896859_48897723
transcript_144151.known	chrX	+	938	7	FSM	ENSG00000102103.18	ENST00000376563.6	938	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	55.4366505321364	4478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	22	False	NA	25	True	AATAAA	-26	NA	48897951	48903143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_144152.known	chrX	+	664	6	FSM	ENSG00000102103.18	ENST00000247140.8	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	143.533132063646	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	10	True	NA	24	True	AATAAA	-25	NA	48897939	48903142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_144153.known	chrX	+	760	6	FSM	ENSG00000102103.18	ENST00000376566.8	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	153.683310739976	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	6	False	NA	24	True	AATAAA	-25	NA	48897911	48903142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_144154.known	chrX	+	784	7	FSM	ENSG00000102103.18	ENST00000470062.5	784	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	140.207782316896	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCCTGGGTTAAAATAAA	66	False	NA	-20	True	NA	NA	NA	48897995	48903098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
transcript_144155.known	chrX	+	1012	5	FSM	ENSG00000102103.18	ENST00000470059.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	32.9431328200583	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCGGCCTCCCTGGCCC	276	False	NA	-34	True	NA	NA	NA	48898509	48903084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898577_48901189_48901302_48901929_48902043_48902232_48902796_48902927
transcript_144156.nnic	chrX	-	1363	5	NNC	ENSG00000102100.16	novel	1739	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.0156232565275	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	0	True	NA	-1	True	AATAAA	-18	NA	48911646	48903612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_48904393_48904745_48904893_48906391_48906544_48909813_48909997_48911545
transcript_144158.known	chrX	-	865	5	FSM	ENSG00000102100.16	ENST00000376529.8	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	67.7140125823304	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	0	True	NA	-5	True	AATAAA	-18	NA	48911646	48903183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48903466_48904745_48904893_48906391_48906544_48909813_48909997_48911545
transcript_14416.known	chr1	+	850	8	FSM	ENSG00000143774.17	ENST00000366722.5	850	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	668.530340617784	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGGAGATGCTGCCCC	24	True	NA	NA	False	NA	NA	NA	228140316	228148808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140364_228145491_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147620_228147700_228148370_228148540_228148664
transcript_144161.known	chrX	-	1456	5	FSM	ENSG00000102100.16	ENST00000247138.11	1456	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	59.3143110893147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGGGTTGGGCAGCCT	0	True	NA	-4	True	AATAAA	-19	NA	48911646	48903182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48903466_48904745_48905483_48906391_48906544_48909813_48909997_48911545
transcript_144162.known	chrX	-	1739	4	FSM	ENSG00000102100.16	ENST00000445167.7	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	59.4100627466051	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	7875	False	NA	-1	True	AATAAA	-18	NA	48911669	48903612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48904893_48906391_48906544_48909813_48909997_48911545
transcript_144163.known	chrX	-	3047	4	FSM	ENSG00000102100.16	ENST00000376521.6	3047	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	20.0166597280032	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	7586	False	NA	-5	True	AATAAA	-18	NA	48911958	48903183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48911545
transcript_144166.nnic	chrX	+	891	3	ISM	ENSG00000102103.18	ENST00000465859.2	812	6	3894	-556	3894	238	3prime_fragment	FALSE	canonical	3	361	junction_1	23	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATATCCTGACATTTGT	3578	False	NA	14	True	AATAAA	-21	NA	48902403	48903640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48902518_48902731_48902796_48902927
transcript_144169.known	chrX	-	2075	6	FSM	ENSG00000102096.9	ENST00000376509.4	2075	6	0	0	0	0	multi-exon	TRUE	canonical	3	1093	junction_1	94.5993657484023	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCCATTTGTAGGT	-1	True	NA	-16	True	AATAAA	-17	NA	48919024	48913181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
transcript_14417.known	chr1	+	842	7	FSM	ENSG00000143774.17	ENST00000366728.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	485.258264569841	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	-3	True	NA	NA	False	AATAAA	-29	NA	228140289	228148955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148664
transcript_144174.known	chrX	-	2077	10	FSM	ENSG00000068308.15	ENST00000455452.5	2077	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	135.773504206249	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTCTGTTCTGTGTGGG	1191	False	NA	-1	True	AATAAA	-22	NA	48957189	48922205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48922911_48923136_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
transcript_144176.known	chrX	-	2740	9	FSM	ENSG00000068308.15	ENST00000156084.8	2740	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	114.948629830894	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCGACTCTGTTCTGT	-39	True	NA	-6	True	AATAAA	-17	NA	48957631	48922210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
transcript_144177.known	chrX	-	1493	9	FSM	ENSG00000068308.15	ENST00000428668.2	1493	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	121.910571731905	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCGCACAGAACCATCCC	-6	True	NA	NA	False	NA	NA	NA	48958386	48922942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48958231
transcript_144178.nnic	chrX	+	830	2	Antisense	novelGene_ENSG00000068308.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	9	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAGACGTTCTTGGGGG	1582	False	NA	13	True	AATAAA	-20	NA	48919258	48922681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_48919648_48922240
transcript_144184.known	chrX	-	3031	26	FSM	ENSG00000068400.13	ENST00000376423.8	3031	26	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_16	30.8562084514608	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	-2	True	NA	-6	True	NA	NA	NA	49002264	48973722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_14419.known	chr1	+	7828	3	FSM	ENSG00000181873.13	ENST00000366711.4	7828	3	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_1	1	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTACGGGCTCTATGGTG	-1	True	NA	7	True	AATAAA	-18	NA	228165803	228182257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228166158_228174691_228175030_228175121
transcript_144197.known	chrX	-	3279	10	FSM	ENSG00000068323.17	ENST00000493583.5	3279	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	59.5223788187847	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	104	False	NA	-1	True	AATAAA	-38	NA	49043410	49028725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039346_49040454_49040569_49043110
transcript_144198.known	chrX	-	3291	10	FSM	ENSG00000068323.17	ENST00000315869.8	3291	10	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_8	41.0016560942255	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	-3	True	NA	-1	True	AATAAA	-38	NA	49043357	49028725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
transcript_14420.known	chr1	+	853	3	FSM	ENSG00000181873.13	ENST00000546123.2	853	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGTCTTCCCGTCCCAT	8745	False	NA	NA	False	NA	NA	NA	228174549	228175575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228174611_228174691_228175030_228175121
transcript_144212.known	chrX	-	439	2	FSM	ENSG00000243279.4	ENST00000618882.1	439	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCATCCATGGCCAATTT	6254	False	NA	NA	False	NA	NA	NA	49073835	49071596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49072009_49073808
transcript_144214.known	chrX	-	1260	3	FSM	ENSG00000243279.4	ENST00000553851.3	1260	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCCTCCTGGGTAAAG	4	True	NA	-4	True	AATAAA	-24	NA	49074002	49071160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49072009_49072432_49072651_49073808
transcript_144215.known	chrX	-	1444	11	FSM	ENSG00000196998.19	ENST00000322995.13	1444	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	60.9695825801686	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	0	True	NA	-2	True	AATAAA	-18	NA	49079898	49074639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075979_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_144216.known	chrX	-	1658	11	FSM	ENSG00000068394.11	ENST00000156109.7	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	7.52661942707349	1016	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAATAGAAAGATGAAATC	-3	True	NA	-22	True	AATAAA	-15	NA	49123735	49113406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
transcript_144218.known	chrX	+	642	5	FSM	ENSG00000269313.5	ENST00000612119.1	642	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.12132034355964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGGCCGCCGATGGCCC	1331	False	NA	NA	False	NA	NA	NA	49163995	49166213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49164030_49164706_49164790_49164862_49165091_49165189_49165362_49166088
transcript_144223.known	chrX	+	1757	4	FSM	ENSG00000269313.5	ENST00000615915.4	1757	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTGCCAGGCGCTC	1267	False	NA	NA	False	AATAAA	-15	NA	49163931	49166632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49164790_49164907_49165091_49165189_49165362_49166088
transcript_144224.nic	chrX	-	1438	8	NIC	ENSG00000012211.13	novel	2795	9	NA	NA	-287	99	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	28.4590647658517	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGGGCCGAGCCGCCGC	9107	False	NA	NA	False	NA	NA	NA	49185185	49177037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49184825
transcript_144225.known	chrX	-	2795	9	FSM	ENSG00000012211.13	ENST00000599218.6	2795	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	12.4442506805352	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGGGAGTTGGTCT	-7	True	NA	-12	True	AATAAA	-18	NA	49186373	49174801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49186255
transcript_144228.known	chrX	+	1103	5	FSM	ENSG00000102007.11	ENST00000376327.6	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	6.37867541108654	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGAGGCCCGGTGCGGTGG	-4	True	NA	NA	False	ATTAAA	-19	NA	49171897	49175235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49172097_49173128_49173282_49173387_49173484_49174334_49174426_49174671
transcript_144236.known	chrX	-	2421	7	FSM	ENSG00000102003.12	ENST00000263233.9	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	4.6696419087073	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCCGGCTCTGATTTC	-2	True	NA	-10	True	AATAAA	-16	NA	49200193	49187814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_144239.known	chrX	-	574	3	FSM	ENSG00000102003.12	ENST00000472737.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATTCTATACACATTT	-4	True	NA	NA	False	NA	NA	NA	49200195	49197376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49197840_49198967_49199034_49200150
transcript_14424.known	chr1	+	10596	32	FSM	ENSG00000154358.23	ENST00000366704.2	10596	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.17689292796114	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATGTCGACTGGCCTG	3724	False	NA	NA	False	AATAAA	-27	NA	228211783	228285361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228212772_228213440_228213711_228214173_228214435_228214789_228215099_228215562_228215830_228216420_228216703_228217012_228217289_228224458_228224735_228243182_228243459_228244295_228244572_228245412_228245689_228246527_228246804_228249964_228250241_228256650_228256927_228264115_228264392_228268529_228268806_228273769_228274049_228274177_228274445_228274571_228274842_228275759_228276027_228276449_228276717_228276929_228277043_228277159_228277314_228277753_228277859_228278688_228278956_228279174_228279445_228279820_228280088_228280178_228280446_228280529_228280797_228281932_228282206_228283017_228283285_228283502
transcript_144240.known	chrX	+	542	2	FSM	ENSG00000237341.1	ENST00000433499.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGTAGTGTATCATCTT	NA	False	NA	NA	False	AATAAA	-16	NA	49198965	49202454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49199225_49202171
transcript_144241.known	chrX	-	2062	2	FSM	ENSG00000102003.12	ENST00000494396.5	2062	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAACCAGACC	-4	True	NA	NA	False	NA	NA	NA	49200195	49197016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49199034_49200150
transcript_144247.nnic	chrX	-	1218	8	NIC	ENSG00000102001.13	novel	5813	48	NA	NA	-292	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	1.98976975388345	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGATTTTGTTGTCTT	NA	False	NA	NA	False	AATAAA	-45	NA	49210004	49205062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_49205368_49205615_49205814_49206510_49206624_49206727_49206856_49207004_49207113_49208514_49208685_49209261_49209394_49209940
transcript_14425.known	chr1	-	937	3	FSM	ENSG00000162913.10	ENST00000657820.1	937	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGCTTTGATATATGT	106	False	NA	NA	False	AATAAA	-26	NA	228213601	228203502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228204156_228204329_228204434_228213421
transcript_144254.known	chrX	+	2310	17	FSM	ENSG00000101997.13	ENST00000376227.4	2310	17	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	4.58087055045217	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGCTGAGGCATGGAT	-2	True	NA	27	True	AATAAA	-18	NA	49235469	49250520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49235687_49237085_49237264_49242015_49242149_49242885_49242993_49243117_49243185_49243283_49243463_49246730_49246926_49247495_49247559_49247648_49247769_49248190_49248311_49248406_49248524_49248632_49248735_49248816_49248925_49249166_49249263_49249508_49249569_49249650_49249726_49250147
transcript_144256.known	chrX	+	527	5	FSM	ENSG00000215269.6	ENST00000445148.2	561	5	34	0	34	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTGCGCATCTTTTG	9563	False	NA	NA	False	AATAAA	-21	NA	49570433	49577754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49570508_49571546_49571639_49572103_49572225_49575047_49575174_49577640
transcript_144257.known	chrX	+	528	5	FSM	ENSG00000189064.9	ENST00000362097.2	558	5	33	-3	33	3	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGCATCTTTTGTGA	8	False	NA	NA	False	AATAAA	-24	NA	49589528	49596827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49589604_49590642_49590732_49591196_49591318_49594117_49594244_49596710
transcript_144258.known	chrX	+	487	5	FSM	ENSG00000101951.17	ENST00000376141.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.26917420765551	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCTTTTGTAAAATT	0	True	NA	NA	False	AATAAA	-26	NA	49829259	49833973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49829297_49830398_49830507_49830996_49831085_49832524_49832651_49833845
transcript_144259.known	chrX	+	790	5	FSM	ENSG00000101951.17	ENST00000218068.7	790	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.26917420765551	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTAGAAGTGATGATGA	-3	True	NA	NA	False	NA	NA	NA	49829302	49834264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49829352_49830398_49830507_49830996_49831085_49832524_49832651_49833845
transcript_144260.known	chrX	-	2175	2	FSM	ENSG00000234390.4	ENST00000437322.2	2175	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCGGTGAAACCTAAA	1797	False	NA	NA	False	AATAAA	-23	NA	49879241	49876723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49878748_49879090
transcript_144263.known	chrX	+	4697	13	FSM	ENSG00000147082.18	ENST00000376042.6	4697	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.763762615825973	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTCATTTCCCCTCTTAT	-9	True	NA	NA	False	AATAAA	-23	NA	50204764	50351914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_50204951_50284541_50284617_50285126_50285260_50288779_50288888_50294862_50294994_50308504_50311497_50312536_50312633_50313855_50313949_50342201_50342340_50346651_50346808_50347625_50347776_50351240_50351372_50351606
transcript_144264.nic	chrX	-	1708	2	ISM	ENSG00000158352.18	ENST00000289292.11	6261	10	72	102912	-36	-7520	5prime_fragment	FALSE	canonical	2	12	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATCCAA	-5	True	NA	NA	False	NA	NA	NA	50814230	50694558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_50695938_50813901
transcript_144265.known	chrX	+	1925	2	FSM	ENSG00000122824.11	ENST00000356450.3	1925	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGAGTTATTCTTATT	1	True	NA	NA	False	AATAAA	-15	NA	51332821	51337525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51333460_51336238
transcript_144267.nnic	chrX	+	654	2	NNC	ENSG00000226530.3	novel	406	2	NA	NA	60055	178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGGTGCCTAGCATGA	NA	False	NA	6	True	AATAAA	-19	NA	51456585	51465839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_51456807_51465406
transcript_144269.known	chrX	-	2381	2	FSM	ENSG00000196368.5	ENST00000375992.4	2381	2	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	0	1520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGAGTTTACTTGTA	-5	True	NA	-13	True	AATAAA	-15	NA	51496592	51490010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_51491750_51495950
transcript_14427.nnic	chr1	+	747	2	NNC	ENSG00000231563.2	novel	387	3	NA	NA	-206	2387	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTGGTCAAGGCATC	-20	True	NA	NA	False	ATTAAA	-22	NA	228407158	228413257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_228407479_228412830
transcript_144273.known	chrX	-	1893	1	FSM	ENSG00000224109.4	ENST00000417339.4	1893	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGATACTCTTTCCA	1	True	NA	-8	True	AATAAA	-31	NA	51618912	51617019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_51617000_51618900
transcript_144274.known	chrX	-	1620	1	FSM	ENSG00000283093.1	ENST00000634648.1	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51682831	51681211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_51681200_51682800
transcript_144275.known	chrX	+	1620	1	FSM	ENSG00000223591.5	ENST00000602548.2	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51710511	51712131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51710500_51712100
transcript_144278.nnic	chrX	+	615	2	Genic_Genomic	ENSG00000189369.9	novel	2791	1	NA	NA	-28	-302	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCGGTTATTTGAAATG	-14	True	NA	9	True	AATAAA	-16	NA	51743413	51745930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chrX_+_51743928_51745829
transcript_14428.known	chr1	-	895	1	FSM	ENSG00000181218.6	ENST00000366695.3	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	510	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGCACTTTAATTCT	-6	True	NA	-14	True	ATTAAA	-19	NA	228457873	228456978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228457000_228457900
transcript_144280.known	chrX	+	2791	1	FSM	ENSG00000189369.9	ENST00000340438.6	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	276	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTCAGGCCGTCTT	14	True	NA	NA	False	AATAAA	-36	NA	51743441	51746232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51743400_51746200
transcript_144284.known	chrX	+	2701	13	FSM	ENSG00000179222.18	ENST00000375772.7	2701	13	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	409.888695935318	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	NA	False	NA	21	True	AATAAA	-21	NA	51803006	51902354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51803118_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_144286.known	chrX	+	2723	13	FSM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	187.839026828825	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-17	True	NA	21	True	AATAAA	-21	NA	51893622	51902354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_14429.known	chr1	-	119	1	FSM	ENSG00000199337.1	ENST00000362467.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGGCTTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	228614868	228614749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228614700_228614900
transcript_144297.known	chrX	+	2875	14	FSM	ENSG00000179222.18	ENST00000375695.2	2875	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	579.60744724288	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	-1	True	NA	21	True	AATAAA	-21	NA	51893638	51902354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51893756_51894268_51894350_51894626_51894795_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_14430.known	chr1	+	3965	3	FSM	ENSG00000116574.6	ENST00000366691.4	3965	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	0.5	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGGCTCTTGCCTTTT	-21	True	NA	NA	False	AATAAA	-15	NA	228735478	228746664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228736005_228737672_228737732_228743284
transcript_144301.known	chrX	-	2510	13	FSM	ENSG00000187243.17	ENST00000360134.10	2510	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	440.852015987224	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	5	True	NA	NA	False	ATTAAA	-14	NA	52069198	52061826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52062039_52062221_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068174_52069129
transcript_144302.nic	chrX	-	2059	3	ISM	ENSG00000187243.17	ENST00000490581.6	917	5	141	0	141	0	intron_retention	FALSE	canonical	3	1411	junction_2	92.5	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	4827	False	NA	NA	False	ATTAAA	-14	NA	52064402	52061826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_52062039_52062233_52062665_52062986
transcript_144304.nnic	chrX	-	757	3	NNC	ENSG00000287215.1	novel	3144	4	NA	NA	-5833	-1655	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGGTACCACTCAGTAAA	NA	False	NA	NA	False	AATATA	-27	NA	52222563	52198396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_52198540_52199071_52199215_52222092
transcript_144305.known	chrX	-	1292	8	FSM	ENSG00000241476.9	ENST00000337502.6	1281	8	-11	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_1	0.728431359084683	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTTTGCTCGTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	52707189	52696895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52697519_52697983_52698089_52700442_52700579_52702580_52702631_52704496_52704593_52705127_52705243_52705680_52705770_52707111
transcript_144306.known	chrX	+	1281	8	FSM	ENSG00000268447.6	ENST00000596480.6	1281	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.728431359084683	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTTTGCTCGTGCC	0	True	NA	NA	False	AATAAA	-16	NA	52751251	52761536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52751319_52752660_52752750_52753187_52753303_52753837_52753934_52755799_52755850_52757853_52757990_52760343_52760449_52760913
transcript_144310.known	chrX	+	2942	4	FSM	ENSG00000179304.18	ENST00000593751.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	47.814456205443	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	69	False	NA	NA	False	AATAAA	-16	NA	52897399	52908556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52898727_52899467_52899542_52900567_52900661_52907108
transcript_144312.known	chrX	+	3746	3	FSM	ENSG00000179304.18	ENST00000416841.8	3757	3	11	0	11	0	multi-exon	FALSE	canonical	3	130	junction_2	22	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	10	True	NA	NA	False	AATAAA	-20	NA	52897340	52908560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52899542_52900567_52900661_52907108
transcript_144314.known	chrX	-	2942	4	FSM	ENSG00000268350.8	ENST00000596733.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	46.4207807871527	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	53	False	NA	NA	False	AATAAA	-16	NA	52958414	52947257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087
transcript_144315.known	chrX	-	1733	4	FSM	ENSG00000268350.8	ENST00000619518.5	1733	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	56.2751178487339	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958404
transcript_144316.known	chrX	-	319	4	FSM	ENSG00000268350.8	ENST00000616592.1	319	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	72.7109956532634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCATGGATCCACTCCA	0	True	NA	NA	False	NA	NA	NA	52995455	52948594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52995414
transcript_144318.known	chrX	-	3791	3	FSM	ENSG00000268350.8	ENST00000622447.5	3791	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	19.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272
transcript_144319.known	chrX	-	1694	5	FSM	ENSG00000268350.8	ENST00000622197.5	1694	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	53.183644102299	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	21	False	NA	NA	False	AATAAA	-20	NA	52958446	52947253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955244_52956272_52956347_52957087_52957124_52958404
transcript_14434.known	chr1	+	2987	8	FSM	ENSG00000168118.12	ENST00000366690.5	2987	8	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	43.5524548852371	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTAATTTGTACTGT	-34	True	NA	NA	False	TTTAAA	-30	NA	229271110	229305894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_144341.known	chrX	-	673	4	FSM	ENSG00000124313.18	ENST00000498281.2	673	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.2672897060218	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATGTATATTCCACC	86	False	NA	-2	True	AATAAA	-18	NA	53281535	53266323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53266765_53266968_53267065_53279563_53279660_53281495
transcript_144343.nic	chrX	-	657	3	NIC	ENSG00000124313.18	novel	673	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATGTATATTCCACC	6	True	NA	-2	True	AATAAA	-18	NA	53281615	53266323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_53266765_53266968_53267065_53281495
transcript_144345.known	chrX	-	922	3	FSM	ENSG00000124313.18	ENST00000639161.2	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	-5	True	NA	-6	True	AATAAA	-14	NA	53281584	53266327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53267065_53279563_53279660_53281495
transcript_144346.known	chrX	-	722	3	FSM	ENSG00000124313.18	ENST00000638583.1	722	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	15.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTGCCACTACTGGAGA	-2	True	NA	NA	False	NA	NA	NA	53281581	53266641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53267065_53279563_53279777_53281495
transcript_144348.known	chrX	-	835	2	FSM	ENSG00000124313.18	ENST00000485377.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTGTCTGATGTATATT	27	False	NA	-7	True	AATAAA	-13	NA	53281594	53266328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53267065_53281495
transcript_144349.known	chrX	-	730	3	FSM	ENSG00000124313.18	ENST00000462054.6	730	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	7	True	NA	-6	True	AATAAA	-14	NA	53281572	53266327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53266885_53279563_53279660_53281495
transcript_144350.known	chrX	-	9710	25	FSM	ENSG00000072501.19	ENST00000322213.9	9710	25	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_22	49.9894259652312	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTGTGTCTTTGTTCC	13	True	NA	-4	True	AATAAA	-14	NA	53422654	53374148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53380187_53380619_53380731_53381017_53381088_53382231_53382384_53382505_53382661_53383096_53383254_53394777_53394889_53396226_53396381_53396471_53396618_53399588_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_144352.nic	chrX	-	2650	16	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-64	25470	10	5180	5prime_fragment	FALSE	canonical	3	352	junction_13	43.2488407037948	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGAAAATGAGATAGAAAA	NA	False	NA	NA	False	GATAAA	-31	NA	53422718	53399618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_53399731_53403565_53403673_53403776_53403894_53405011_53405150_53405244_53405392_53405492_53405673_53405770_53405957_53409061_53409270_53409420_53409504_53411760_53411902_53411994_53412254_53412899_53413139_53413231_53413436_53414757_53414871_53414980_53415170_53422491
transcript_144359.known	chrX	+	1488	8	FSM	ENSG00000158423.17	ENST00000375327.6	1488	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	3.77424137532083	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACATGTTGTAACAGGA	0	True	NA	10	True	AATAAA	-20	NA	53422872	53431115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53428282_53428628_53429853_53429973_53430395_53430791_53430906
transcript_144362.nic	chrX	+	1219	7	NIC	ENSG00000158423.17	novel	1488	8	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	4.01732359773132	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACATGTTGTAACAGGA	NA	False	NA	10	True	AATAAA	-20	NA	53422796	53431115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53429853_53429973_53430395_53430791_53430906
transcript_144366.known	chrX	+	1281	6	FSM	ENSG00000158423.17	ENST00000414955.6	1281	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.97994974842648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTGTAACAGGACACAA	NA	False	NA	15	True	AATAAA	-25	NA	53422855	53431120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53429853_53429973_53430395
transcript_144369.nnic	chrX	+	754	5	NNC	ENSG00000158423.17	novel	1488	8	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.63680924774785	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACATGTTGTAACAGGA	9	False	NA	10	True	AATAAA	-20	NA	53422881	53431115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_53423139_53423313_53423403_53426276_53426394_53428002_53428085_53430906
transcript_14437.known	chr1	+	708	6	FSM	ENSG00000168118.12	ENST00000473894.1	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	216.494434108593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGATCTTTATGGGGAA	49	False	NA	-77	True	NA	NA	NA	229271193	229303894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229271371_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_144371.nic	chrX	-	717	4	ISM	ENSG00000072501.19	ENST00000322213.9	9710	25	-64	39099	10	-1253	5prime_fragment	FALSE	canonical	3	352	junction_1	16.1107279647928	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGGAGAAAGAAGAGGTAG	NA	False	NA	-7	True	AAGAAA	-30	NA	53422718	53413247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_53413436_53414757_53414871_53414980_53415170_53422491
transcript_144375.known	chrX	-	901	6	FSM	ENSG00000072506.14	ENST00000495986.2	901	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_5	416.22945594948	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGAGAAGGCAGAGAAA	0	True	NA	NA	False	NA	NA	NA	53434348	53431405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434177
transcript_144377.known	chrX	-	954	6	FSM	ENSG00000072506.14	ENST00000168216.11	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_5	72.560595366907	2907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	-1	True	NA	-5	True	AATAAA	-17	NA	53434370	53431260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_144378.known	chrX	-	556	3	FSM	ENSG00000072506.14	ENST00000477706.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	460.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCAGTGTTGTGTGCT	2077	False	NA	-2	True	AATAAA	-20	NA	53432322	53431257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431595_53431973_53432117_53432246
transcript_144379.known	chrX	-	916	6	FSM	ENSG00000072506.14	ENST00000375304.9	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	306.038821066871	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCAGTGTTGTGTGCT	43	False	NA	-2	True	AATAAA	-20	NA	53434356	53431257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_144380.known	chrX	-	823	5	FSM	ENSG00000072506.14	ENST00000375298.4	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	350.819308904171	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTAGGCAGTGTTGT	-2	True	NA	-7	True	AATAAA	-15	NA	53434350	53431262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431595_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_144381.known	chrX	-	1154	5	FSM	ENSG00000072506.14	ENST00000684692.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_4	78.3848677998502	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	2	True	NA	-5	True	AATAAA	-17	NA	53434367	53431260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_144382.known	chrX	-	14796	83	FSM	ENSG00000086758.16	ENST00000342160.7	14796	83	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_67	190.389939258488	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTTGCCTTGTGTGG	-16	True	NA	2	True	AATAAA	-27	NA	53684169	53532095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
transcript_14439.known	chr1	+	2799	6	FSM	ENSG00000168118.12	ENST00000618010.4	2799	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	266.9011802147	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGTAATTTGTAC	NA	False	NA	NA	False	TTTAAA	-27	NA	229271061	229305891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229271371_229295847_229295911_229297519_229297637_229298976_229299073_229302861_229302990_229303805
transcript_1444.known	chr1	+	914	5	FSM	ENSG00000175279.22	ENST00000477755.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	64.0800280898815	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTCAGAGGATGGAAGC	30	False	NA	53	True	AAGAAA	-2	NA	10430782	10442334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_144402.known	chrX	-	872	6	FSM	ENSG00000086758.16	ENST00000446750.1	872	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.5912272262987	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTGTGTTGAACTTCA	-16	True	NA	NA	False	NA	NA	NA	53684169	53647440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53680558_53680695_53683873
transcript_144404.known	chrX	+	423	1	FSM	ENSG00000235916.1	ENST00000455300.1	423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATCACATTACCACCA	NA	False	NA	NA	False	NA	NA	NA	53825886	53826309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_53825900_53826300
transcript_144405.known	chrX	-	6357	22	FSM	ENSG00000172943.21	ENST00000338154.11	6357	22	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	14.4815153113991	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGCTTGGCATTCTT	-8	True	NA	-4	True	GATAAA	-19	NA	54044473	53936679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
transcript_144408.known	chrX	-	1140	2	FSM	ENSG00000184083.12	ENST00000477084.1	1140	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTGTGCTTGTTCTTT	282	False	NA	0	True	AATAGA	-17	NA	54183281	54173788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_54174147_54182499
transcript_144416.nnic	chrX	-	1492	3	NNC	ENSG00000196632.11	novel	11172	23	NA	NA	125	22003	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	4	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAATGTATTGTATT	NA	False	NA	NA	False	ATTAAA	-2	NA	54358517	54311174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_54311292_54333136_54333793_54357798
transcript_144419.nic	chrX	-	903	2	ISM	ENSG00000196632.11	ENST00000354646.6	11341	24	-84	140469	-84	-116	5prime_fragment	FALSE	canonical	2	4	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGGAAGAAGAAGCAG	22	False	NA	NA	False	AATGAA	-3	NA	54358089	54333293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_54333793_54357685
transcript_144420.nnic	chrX	-	837	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-54	-116	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGGAAGAAGAAGCAG	-32	True	NA	NA	False	AATGAA	-3	NA	54358059	54333293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_54333793_54357721
transcript_144421.nnic	chrX	-	1218	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	125	-116	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	239	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGGAAGAAGAAGCAG	NA	False	NA	NA	False	AATGAA	-3	NA	54358517	54333293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_54333793_54357798
transcript_144423.known	chrX	-	715	2	FSM	ENSG00000196632.11	ENST00000458404.1	715	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAAACATGGGTTGAG	NA	False	NA	-94	True	TATAAA	-8	NA	54358642	54333177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_54333793_54358542
transcript_144424.known	chrX	-	4343	18	FSM	ENSG00000102302.8	ENST00000375135.4	4343	18	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_16	30.3848441550267	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAGCACTGCTGTGC	-4	True	NA	-10	True	AATACA	-23	NA	54496234	54445453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_54446415_54447310_54447455_54448805_54448968_54449142_54449269_54449658_54449761_54450270_54450302_54455447_54455528_54455691_54455785_54456219_54456367_54456508_54456568_54465450_54465590_54465695_54465853_54467783_54467933_54468786_54468877_54470015_54470458_54470582_54470761_54471313_54471488_54495125
transcript_144428.known	chrX	+	4076	5	FSM	ENSG00000158526.8	ENST00000375151.5	4076	5	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_1	56.3293884220306	1539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAATGTGTGTTTGT	-8	True	NA	NA	False	AATAAA	-25	NA	54440403	54448032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54440503_54440689_54440781_54443399_54443492_54444007_54444185_54444415
transcript_14443.known	chr1	+	531	3	FSM	ENSG00000168118.12	ENST00000481981.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_2	3.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAAATAATTGATGAT	NA	False	NA	NA	False	AATAAA	-16	NA	229271074	229288882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229271371_229286485_229286567_229288728
transcript_144431.known	chrX	+	2638	17	FSM	ENSG00000130119.17	ENST00000674498.1	2638	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	12.7058057595731	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGTGAGAAAAAT	-5	True	NA	-33	True	NA	NA	NA	54530182	54621521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
transcript_144447.known	chrX	+	2357	16	FSM	ENSG00000130119.17	ENST00000336470.8	2357	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	8.25590697622012	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-39	True	NA	NA	False	NA	NA	NA	54530210	54561071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_144449.known	chrX	+	2317	16	FSM	ENSG00000130119.17	ENST00000674311.1	2317	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.7113092008021	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTAAGGCAGGAGAATCG	10	True	NA	NA	False	NA	NA	NA	54530259	54560967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54530420_54532523_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_144475.nnic	chrX	+	572	5	NNC	ENSG00000130119.17	novel	2575	9	NA	NA	-10	-2013	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	23.9204410494456	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCAACATTTTGTGTT	NA	False	NA	5	True	AGTAAA	-16	NA	54530172	54565276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540171_54564998
transcript_14448.known	chr1	-	1423	7	FSM	ENSG00000143632.15	ENST00000366683.4	1423	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	136.812523793206	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTTTATTTGCTT	144	False	NA	-1	True	ATTAAA	-24	NA	229434104	229431244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229431565_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229432986_229433128_229434003
transcript_144487.nnic	chrX	+	645	5	NNC	ENSG00000130119.17	novel	895	9	NA	NA	-2	-2013	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.9937492185546	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGCAACATTTTGTGTT	-33	True	NA	5	True	AGTAAA	-16	NA	54530216	54565276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540171_54564998
transcript_144489.known	chrX	+	8684	16	FSM	ENSG00000130119.17	ENST00000360845.3	8684	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	9.89185972852875	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATGTCTGCATTTTTT	-31	True	NA	NA	False	AATAAA	-26	NA	54530218	54567289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_14449.known	chr1	-	1491	7	FSM	ENSG00000143632.15	ENST00000366684.7	1491	7	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_4	10.6731750977236	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTTTATTTGCTT	0	True	NA	-1	True	ATTAAA	-24	NA	229434094	229431244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229432986_229433128_229434003
transcript_14451.known	chr1	-	2236	6	FSM	ENSG00000143632.15	ENST00000684723.1	2236	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	144.445976060256	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGGCAAGGGAGGGCC	-6	True	NA	NA	False	AAGAAA	-23	NA	229434100	229430364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229434003
transcript_144518.known	chrX	+	2051	13	FSM	ENSG00000102316.17	ENST00000375068.6	2051	13	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_1	244.142532936989	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	5	True	NA	34	True	ATTAAA	-19	NA	54807744	54816015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_144522.known	chrX	+	2048	13	FSM	ENSG00000102316.17	ENST00000375058.5	2048	13	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_1	311.79373523747	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	-8	True	NA	26	True	ATTAAA	-11	NA	54808370	54816007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_144527.nic	chrX	+	2176	13	NIC	ENSG00000102316.17	novel	2026	12	NA	NA	-22	0	intron_retention	FALSE	canonical	3	133	junction_1	476.034750132103	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTTATTGCTTTTTTTG	629	False	NA	31	True	ATTAAA	-16	NA	54809037	54816012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_144530.known	chrX	+	2066	12	FSM	ENSG00000102316.17	ENST00000375053.6	2066	12	0	0	0	0	multi-exon	TRUE	canonical	3	1016	junction_1	253.52526077541	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	13	True	NA	30	True	NA	NA	NA	54807598	54815694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_144535.known	chrX	+	1958	12	FSM	ENSG00000102316.17	ENST00000218439.8	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_1	323.843804815462	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	-7	True	NA	30	True	NA	NA	NA	54808337	54815694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_144536.known	chrX	+	2026	12	FSM	ENSG00000102316.17	ENST00000396224.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	494.626296868372	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	651	False	NA	30	True	NA	NA	NA	54809059	54815694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_144547.known	chrX	+	2597	14	FSM	ENSG00000067445.22	ENST00000445561.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	128.650896827181	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	253	False	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_144553.known	chrX	+	2306	13	FSM	ENSG00000067445.22	ENST00000375022.8	2306	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	129.540292959372	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	253	False	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_144554.known	chrX	+	4634	13	FSM	ENSG00000067445.22	ENST00000173898.12	4634	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	103.96620711665	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	0	True	NA	NA	False	ATTAAA	-14	NA	54920823	54931431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54920879_54922202_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54931032_54931203
transcript_144555.nic	chrX	+	3035	13	NIC	ENSG00000067445.22	novel	2597	14	NA	NA	-1	0	intron_retention	TRUE	canonical	0	0	junction_11	133.886845881139	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	232	False	NA	NA	False	ATTAAA	-14	NA	54920794	54931431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_144559.known	chrX	+	1115	12	FSM	ENSG00000067445.22	ENST00000399736.5	1115	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	175.073632679236	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	253	False	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54920879_54922217_54922292_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_14456.known	chr1	-	5208	26	FSM	ENSG00000069248.12	ENST00000261396.6	5208	26	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_19	35.3765119818221	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGAATAATTTTTTCT	-10	True	NA	-1	True	AGTAAA	-19	NA	229508341	229440258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_144564.nnic	chrX	+	534	4	NIC	ENSG00000067445.22	novel	1115	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	242.066565684363	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	233	False	NA	NA	False	ATTAAA	-14	NA	54920795	54931431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_54920879_54927666_54927782_54928602_54928711_54931203
transcript_144565.nnic	chrX	+	386	3	NIC	ENSG00000067445.22	novel	1115	12	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	196.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	232	False	NA	NA	False	ATTAAA	-14	NA	54920794	54931431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_54920879_54922217_54922292_54931203
transcript_144566.known	chrX	-	1940	11	FSM	ENSG00000158578.21	ENST00000650242.1	1940	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.20415945787923	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAGCCTTTTATTGGAC	-1	True	NA	0	True	AATAAA	-16	NA	55030977	55009054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55009344_55013485_55013649_55014746_55015016_55015577_55015743_55017485_55017666_55020319_55020505_55021051_55021275_55023756_55023868_55024717_55024841_55025819_55026016_55030941
transcript_14457.nnic	chr1	+	537	2	NIC	ENSG00000223635.2	novel	723	3	NA	NA	67	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTTTTGTTATAAG	73	False	NA	NA	False	AATAAA	-22	NA	229508435	229514270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_229508680_229513977
transcript_144571.known	chrX	+	3239	6	FSM	ENSG00000169188.5	ENST00000374987.4	3239	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	12.9861464645983	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGCTTTATTTT	-2	True	NA	3	True	AATAAA	-14	NA	55000362	55009057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55000580_55001545_55001630_55002250_55002432_55002961_55003109_55003798_55003869_55006517
transcript_144575.known	chrX	+	728	5	FSM	ENSG00000169188.5	ENST00000471758.1	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	82.965354214877	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGCCTGAGGTGAT	28	True	NA	NA	False	NA	NA	NA	55000392	55006757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55000580_55001545_55001630_55002961_55003109_55003798_55003869_55006517
transcript_14458.known	chr1	-	3869	13	FSM	ENSG00000135776.5	ENST00000344517.5	3869	13	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_12	18.3913853625972	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTGTCACTTTTTT	-13	True	NA	0	True	ATTAAA	-18	NA	229558707	229516581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229518411_229518840_229518876_229521591_229521636_229525935_229526117_229527228_229527309_229530198_229530409_229531635_229531732_229539455_229539592_229540605_229540753_229542236_229542372_229547498_229547702_229549233_229549435_229558135
transcript_144584.known	chrX	-	342	3	FSM	ENSG00000182518.14	ENST00000478918.1	342	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	140	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGAGAGAGCAAGTGGA	235	False	NA	NA	False	AATGAA	-23	NA	55160941	55146268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55146312_55159128_55159229_55160742
transcript_144586.nnic	chrX	-	786	3	NNC	ENSG00000182518.14	novel	712	3	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	137	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	-22	True	NA	-66	True	NA	NA	NA	55161146	55145937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_55146312_55159128_55159229_55160834
transcript_144587.known	chrX	-	712	3	FSM	ENSG00000182518.14	ENST00000489298.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	22	True	NA	-66	True	NA	NA	NA	55161102	55145937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55146312_55159128_55159229_55160864
transcript_144588.known	chrX	-	1170	3	FSM	ENSG00000182518.14	ENST00000477847.6	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	116	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGAGTGTGCACTTCA	5	True	NA	NA	False	NA	NA	NA	55161119	55145386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55146312_55159128_55159229_55160974
transcript_144593.known	chrX	-	1067	4	FSM	ENSG00000182518.14	ENST00000332132.8	1067	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.194976060158	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	-19	True	NA	-5	True	AATAAA	-22	NA	55161195	55143101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55143876_55146180_55146312_55159125_55159229_55161136
transcript_144595.known	chrX	+	1440	1	FSM	ENSG00000187601.5	ENST00000342972.3	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	396	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGCGCATTTTCTGAC	-25	True	NA	22	True	AATAAA	-17	NA	55452126	55453566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55452100_55453600
transcript_144596.known	chrX	-	4643	3	FSM	ENSG00000247746.5	ENST00000500968.4	4643	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCAGTTATTTGCT	-7	True	NA	-4	True	AATAAA	-18	NA	55489848	55484615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55488989_55489168_55489366_55489775
transcript_14460.known	chr1	+	5601	10	FSM	ENSG00000135763.10	ENST00000258243.7	5601	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	19.6135503676589	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTCCTGTGTAATAT	23	True	NA	35	True	CATAAA	-19	NA	229626246	229660200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229626357_229627620_229627760_229632268_229632446_229634916_229638248_229643532_229643694_229645858_229645970_229647509_229647753_229651234_229651323_229654248_229654389_229659099
transcript_144607.known	chrX	+	1573	11	FSM	ENSG00000083750.13	ENST00000262850.7	1573	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	26.528475267154	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATATTGTTTCACACA	82	False	NA	NA	False	NA	NA	NA	55717884	55758348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55727306_55727391_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_144611.nnic	chrX	+	2252	11	NNC	ENSG00000083750.13	novel	2051	10	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_6	25.3408760700967	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	55717703	55758774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55752245_55752402_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_144615.known	chrX	+	2051	10	FSM	ENSG00000083750.13	ENST00000374941.9	2051	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.1695836178605	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	-13	True	NA	NA	False	AATAAA	-17	NA	55717748	55758774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_144622.nic	chrX	+	1262	5	ISM	ENSG00000083750.13	ENST00000374941.9	2051	10	-45	27066	-45	0	5prime_fragment	FALSE	canonical	3	52	junction_3	11.202678251204	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTCATTTACTTT	NA	False	NA	NA	False	AATAAA	-24	NA	55717703	55731708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363
transcript_144626.nic	chrX	+	2103	2	ISM	ENSG00000083750.13	ENST00000262850.7	1573	11	-181	37648	-45	-11008	5prime_fragment	FALSE	canonical	3	76	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCCGGACATGATGGT	NA	False	NA	NA	False	AATATA	-16	NA	55717703	55720700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_55718420_55719313
transcript_144627.nic	chrX	+	1457	2	ISM	ENSG00000083750.13	ENST00000414239.5	644	7	-31	32776	-31	-11009	5prime_fragment	FALSE	canonical	1	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCCGGACATGATGG	-3	True	NA	NA	False	AATATA	-15	NA	55717717	55720699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_55717789_55719313
transcript_144628.known	chrX	+	507	3	FSM	ENSG00000083750.13	ENST00000498762.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	14.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTCATTTACTTT	4388	False	NA	NA	False	AATAAA	-24	NA	55722190	55731708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55722286_55729293_55729361_55731363
transcript_14463.known	chr1	+	4423	16	FSM	ENSG00000143641.10	ENST00000366672.5	4423	16	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_9	33.9937249111264	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTCTTTGCTGGCCAG	16	True	NA	19	True	AATAAA	-19	NA	230067237	230282122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230067407_230178217_230178312_230203136_230203291_230236013_230236113_230236352_230236421_230236659_230236726_230243305_230243428_230246062_230246151_230249183_230249272_230250456_230250561_230255217_230255345_230262572_230262666_230262921_230263006_230265240_230265368_230274444_230274565_230279302
transcript_144639.known	chrX	+	1320	5	FSM	ENSG00000227486.3	ENST00000661602.1	1320	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	12.4498995979887	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATGATTTTCTTATTT	NA	False	NA	NA	False	AATAAA	-12	NA	55908293	56205283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_55985998_55986225_56002824_56002984_56014844_56014962_56204972
transcript_14464.known	chr1	+	540	2	FSM	ENSG00000282564.2	ENST00000633012.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACAGGTGACATTAAGA	2181	False	NA	NA	False	NA	NA	NA	230426490	230436822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230426766_230436557
transcript_144681.known	chrX	+	956	3	FSM	ENSG00000227486.3	ENST00000669152.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	NA	False	NA	NA	False	NA	NA	NA	55908242	56205253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_56014844_56014962_56204972
transcript_144683.known	chrX	+	7897	3	FSM	ENSG00000227486.3	ENST00000658575.1	7897	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	0.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAGAGAATAGAGCAAAAA	NA	False	NA	NA	False	NA	NA	NA	55908231	56021946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_55985998_55986225_56014844
transcript_144684.known	chrX	+	1156	3	FSM	ENSG00000227486.3	ENST00000666613.1	1156	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGGACTTCCTGAAGT	NA	False	NA	24	True	AATAAA	-39	NA	55908152	56015193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_56002824_56002984_56014844
transcript_144688.known	chrX	+	4651	3	FSM	ENSG00000227486.3	ENST00000655874.1	4651	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGCTCTTTTTTTGGT	NA	False	NA	NA	False	AATATA	-4	NA	55908282	56209271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908518_56014844_56014962_56204972
transcript_144694.nnic	chrX	+	329	3	NNC	ENSG00000227486.3	novel	1007	2	NA	NA	476	2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	13.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCTTGTCATGTCTGGG	463	False	NA	12	True	AATAAA	-13	NA	55908948	56205091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_55909042_56014844_56014962_56204972
transcript_144698.known	chrX	+	911	2	FSM	ENSG00000227486.3	ENST00000653318.2	926	2	0	15	0	5	multi-exon	FALSE	canonical	3	32	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCCCCATTCAACATCA	NA	False	NA	9	True	AATAAA	-24	NA	55908223	56015178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_56014844
transcript_144699.nic	chrX	+	633	2	ISM	ENSG00000227486.3	ENST00000655874.1	4651	3	-53	194082	-2	-4	5prime_fragment	FALSE	canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATCATGGACTTCCTG	NA	False	NA	20	True	AATAAA	-35	NA	55908229	56015189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_55908518_56014844
transcript_14470.known	chr1	+	991	6	FSM	ENSG00000173409.14	ENST00000450711.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	77.5231578304187	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCTTTTGTTTCTACTT	29	False	NA	NA	False	NA	NA	NA	230979115	230999803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_230999622
transcript_144701.nnic	chrX	+	1962	7	NNC	ENSG00000102349.18	novel	1908	7	NA	NA	31	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	19.7603699920377	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTTTCAGACAGTGC	-5	True	NA	29	True	AATAAA	-23	NA	56232386	56285097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_56232489_56233157_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_14471.known	chr1	+	1428	6	FSM	ENSG00000173409.14	ENST00000310256.7	1428	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_3	19.3432158650003	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTCCCCTTTCCACTC	7	True	NA	NA	False	AATAAA	-18	NA	230979093	231000733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_144715.known	chrX	+	9096	6	FSM	ENSG00000102349.18	ENST00000468660.6	9096	6	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	13.9226434271657	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCCATTTTCTTGACT	2	True	NA	19	True	AATAAA	-21	NA	56232355	56291531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_144717.known	chrX	+	713	2	FSM	ENSG00000230105.1	ENST00000446028.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTCATGGACAGGAAGAA	1	True	NA	NA	False	AAGAAA	-15	NA	56618390	56624458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56618514_56623868
transcript_144718.known	chrX	-	1717	6	FSM	ENSG00000204271.13	ENST00000475785.7	1717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.4794843916918	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACACTTGTATAAGAGAT	8	True	NA	-70	True	NA	NA	NA	56995527	56976438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978291_56978418_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_144719.known	chrX	-	2998	6	FSM	ENSG00000204271.13	ENST00000639956.1	2998	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	24.8306262506607	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	2	True	NA	-26	True	NA	NA	NA	56995533	56975141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978291_56978422_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_144720.known	chrX	-	3121	6	FSM	ENSG00000204271.13	ENST00000638819.1	3121	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	28.0042853863476	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	-18	True	NA	-26	True	NA	NA	NA	56995553	56975141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978291_56978499_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_144721.known	chrX	-	2938	5	FSM	ENSG00000204271.13	ENST00000640131.1	2938	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	7.03562363973514	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	-20	True	NA	-4	True	AATAAA	-15	NA	56995555	56975119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_144722.known	chrX	-	1620	5	FSM	ENSG00000204271.13	ENST00000478405.1	1620	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	10.356157588604	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCTCTAACAGTGTGA	10	True	NA	-13	True	AATAAA	-20	NA	56995525	56976381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_144723.known	chrX	-	2543	5	FSM	ENSG00000204271.13	ENST00000640187.1	2543	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	19.422924599555	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCAGACATCGCATTTT	28	False	NA	NA	False	NA	NA	NA	56995507	56975401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_144725.known	chrX	-	4299	4	FSM	ENSG00000204271.13	ENST00000639888.1	4299	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	-20	True	NA	-26	True	NA	NA	NA	56995555	56975141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56978661_56984265_56984479_56994722_56994950_56995215
transcript_144726.known	chrX	-	4445	2	FSM	ENSG00000204271.13	ENST00000374919.6	4445	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTCCTGTGTATATTT	-6	True	NA	0	True	ATTAAA	-20	NA	56995541	56990830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56994950_56995215
transcript_144730.known	chrX	+	896	4	FSM	ENSG00000204272.13	ENST00000637096.1	896	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	502.329462493381	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTGTGTTAGATCTAT	-29	True	NA	17	True	AATAAA	-11	NA	56729240	56817569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56729590_56732062_56732200_56811019_56811180_56817319
transcript_144733.known	chrX	+	2344	3	FSM	ENSG00000204272.13	ENST00000374922.9	2344	3	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_2	31	6892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAAAAAGATAAACTGG	-27	True	NA	NA	False	AATAAA	-1	NA	56729242	56819179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56729590_56732062_56732200_56817319
transcript_144734.known	chrX	+	305	3	FSM	ENSG00000204272.13	ENST00000451583.1	305	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGATCGGGTTGTAAG	103	False	NA	NA	False	NA	NA	NA	56729372	56817376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56729484_56732062_56732200_56817319
transcript_144735.known	chrX	+	543	2	FSM	ENSG00000204272.13	ENST00000423617.2	543	2	0	0	0	0	multi-exon	FALSE	canonical	1	27	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATAAGAACTCCTATG	84	False	NA	9	True	AGTAAA	-20	NA	56729353	56817626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56729590_56817319
transcript_14474.known	chr1	+	1037	6	FSM	ENSG00000173409.14	ENST00000480519.5	1037	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.1942980673682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAGGAAAATAAGGTCACA	24	False	NA	NA	False	NA	NA	NA	230979110	230999867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230979257_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_230999622
transcript_144747.known	chrX	-	725	3	FSM	ENSG00000186787.10	ENST00000374910.3	725	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	201	False	NA	-3	True	AATACA	-18	NA	57121315	57119681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_57120102_57120404_57120632_57121237
transcript_144750.nnic	chrX	-	1131	3	NNC	ENSG00000186787.10	novel	725	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	10	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	-45	True	NA	-3	True	AATACA	-18	NA	57121561	57119681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57120102_57120404_57120635_57121080
transcript_144751.nic	chrX	-	907	3	NIC	ENSG00000186787.10	novel	1152	2	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	8	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	-33	True	NA	-3	True	AATACA	-18	NA	57121549	57119681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_57120102_57120404_57120635_57121292
transcript_144752.known	chrX	-	1258	2	FSM	ENSG00000186787.10	ENST00000333933.3	1258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTGTGTAAGCCCT	-30	True	NA	-4	True	AATACA	-17	NA	57121546	57119682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_57120632_57121237
transcript_144753.nnic	chrX	-	1184	2	NNC	ENSG00000186787.10	novel	1261	2	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	0	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	-30	True	NA	-3	True	AATACA	-18	NA	57121546	57119681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57120632_57121312
transcript_144754.nnic	chrX	-	1144	2	NNC	ENSG00000186787.10	novel	1261	2	NA	NA	-96	0	intron_retention	FALSE	canonical	0	0	junction_1	0	149	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-3	True	AATACA	-18	NA	57121644	57119681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57120632_57121450
transcript_144755.nnic	chrX	-	1434	2	NNC	ENSG00000186787.10	novel	1152	2	NA	NA	-13	0	intron_retention	FALSE	canonical	2	4	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	-45	True	NA	-3	True	AATACA	-18	NA	57121561	57119681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57120635_57121080
transcript_144756.known	chrX	-	1152	2	FSM	ENSG00000186787.10	ENST00000275988.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	25	True	NA	-3	True	AATACA	-18	NA	57121491	57119681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_57120635_57121292
transcript_144761.nnic	chrX	+	1239	3	NNC	ENSG00000226310.2	novel	832	3	NA	NA	7	81198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAACACCACCATCAAAA	-21	True	NA	NA	False	NA	NA	NA	57121578	57215123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_57121968_57126884_57127059_57214447
transcript_144762.known	chrX	+	665	2	FSM	ENSG00000226310.2	ENST00000439622.2	1824	2	45	1114	45	-1114	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAGGAAATGGGACCTT	20	False	NA	NA	False	AATACA	-33	NA	57121661	57127243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_57121968_57126884
transcript_144766.nnic	chrX	-	1182	2	NNC	ENSG00000147059.9	novel	1091	2	NA	NA	144	0	intron_retention	FALSE	canonical	2	5	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	338	False	NA	-12	True	AATACA	-18	NA	57137253	57135649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57136603_57137024
transcript_144767.nnic	chrX	-	1129	2	NNC	ENSG00000147059.9	novel	1091	2	NA	NA	174	0	intron_retention	FALSE	canonical	2	3	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	368	False	NA	-12	True	AATACA	-18	NA	57137223	57135649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57136603_57137047
transcript_144768.known	chrX	-	1319	2	FSM	ENSG00000147059.9	ENST00000374906.4	1091	2	-228	0	-102	0	multi-exon	FALSE	canonical	3	18	junction_1	0	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	NA	False	NA	-12	True	AATACA	-18	NA	57137625	57135649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_57136603_57137259
transcript_144775.known	chrX	+	1980	11	FSM	ENSG00000165591.7	ENST00000374900.5	1980	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	4.86312656631513	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	9	True	NA	9	True	AATAAA	-16	NA	57286705	57489193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
transcript_144779.nnic	chrX	+	1911	10	NIC	ENSG00000165591.7	novel	1980	11	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_7	8.96908269804914	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	NA	False	NA	9	True	AATAAA	-16	NA	57286654	57489193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57446927_57447040_57448523_57448719_57488756
transcript_144781.nnic	chrX	+	1727	9	NIC	ENSG00000165591.7	novel	1980	11	NA	NA	-51	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	10.4455433080333	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTCTGTTTTGGGTACA	NA	False	NA	12	True	AATAAA	-19	NA	57286654	57489196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57488756
transcript_144790.nnic	chrX	+	1065	6	NNC	ENSG00000165591.7	novel	1980	11	NA	NA	58507	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.3595774569303	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	8802	False	NA	9	True	AATAAA	-16	NA	57345212	57489193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_57345280_57378650_57378787_57380911_57381030_57446927_57447040_57448523_57448719_57488756
transcript_144792.nic	chrX	+	1329	4	ISM	ENSG00000165591.7	ENST00000374900.5	1980	11	-51	156850	-51	-119823	5prime_fragment	FALSE	canonical	3	26	junction_3	4.49691252107735	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGGTTTCTGGTCTAGC	NA	False	NA	NA	False	ATTAAA	-14	NA	57286654	57332343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597
transcript_144793.known	chrX	-	943	7	FSM	ENSG00000235437.9	ENST00000610088.6	943	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.2794663184921	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGGCCCTCACCATAA	-20	True	NA	NA	False	NA	NA	NA	63561071	63238477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63238735_63238992_63239060_63239786_63239831_63343205_63343290_63399780_63399904_63432363_63432492_63560831
transcript_14480.known	chr1	+	1170	5	FSM	ENSG00000173409.14	ENST00000366658.6	1170	5	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	82.2085761949445	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTAAATTTTCAATT	7	True	NA	20	True	AATAAA	-20	NA	230979093	231000595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230979280_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_144800.known	chrX	-	653	5	FSM	ENSG00000235437.9	ENST00000671338.1	653	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	20.3638773321782	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACTAAAGTAAGAAATAA	109	False	NA	NA	False	NA	NA	NA	63560942	63426891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63426997_63432363_63432492_63509943_63510080_63516909_63517083_63560831
transcript_144805.known	chrX	-	3088	5	FSM	ENSG00000235437.9	ENST00000662156.1	3088	5	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_3	29.7856928742643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTTGCCATTGAGCT	-24	True	NA	-18	True	NA	NA	NA	63561075	63426574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63428982_63432363_63432492_63509943_63510080_63516909_63517083_63560831
transcript_144810.known	chrX	-	3879	4	FSM	ENSG00000235437.9	ENST00000654880.1	3879	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	23.7954243967663	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTTAAGAAGCCAATAC	-12	True	NA	NA	False	AATAAA	-39	NA	63561063	63396557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63399904_63432363_63432492_63516909_63517083_63560831
transcript_144813.nnic	chrX	-	867	4	NNC	ENSG00000235437.9	novel	980	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.2086670449969	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-18	True	NA	-1	True	AATAAA	-17	NA	63561069	63426557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_63426997_63432363_63432492_63443070_63443133_63560831
transcript_144815.known	chrX	-	980	4	FSM	ENSG00000235437.9	ENST00000665831.1	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	5.73488351136175	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-20	True	NA	-1	True	AATAAA	-17	NA	63561071	63426557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63426997_63432363_63432492_63516909_63517083_63560831
transcript_144818.nnic	chrX	-	1065	4	NNC	ENSG00000235437.9	novel	2973	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	20.5318181259127	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-29	True	NA	-1	True	AATAAA	-17	NA	63561080	63426557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_63427073_63432363_63432492_63516909_63517083_63560831
transcript_14482.nnic	chr1	+	965	4	NIC	ENSG00000173409.14	novel	1428	6	NA	NA	-51	-4	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	87.4922218765125	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTTTTTGTAAATTTTC	NA	False	NA	16	True	AATAAA	-16	NA	230979042	231000591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_230979280_230988319_230988440_230990109_230990264_231000137
transcript_144820.known	chrX	-	2973	4	FSM	ENSG00000235437.9	ENST00000609401.6	2973	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	12.684198393627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTCTGTTCCGTTCT	-29	True	NA	-2	True	AATAAA	-16	NA	63561080	63426558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63428982_63432363_63432492_63516909_63517083_63560831
transcript_144823.known	chrX	-	2491	3	FSM	ENSG00000235437.9	ENST00000662689.1	2491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGAAATCAATGACTAAC	136	False	NA	NA	False	NA	NA	NA	63560915	63397669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63399904_63516909_63517083_63560831
transcript_144825.known	chrX	-	2757	3	FSM	ENSG00000235437.9	ENST00000669201.1	2757	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	24	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTGAATCTAAAATAAAAG	-12	True	NA	NA	False	AATATA	-28	NA	63561063	63397506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63399904_63432363_63432492_63560831
transcript_144826.nnic	chrX	-	751	3	NNC	ENSG00000235437.9	novel	1024	4	NA	NA	2	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAACAAAAGATTGTTT	-18	True	NA	NA	False	AATAAA	-21	NA	63561069	63399452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_63399904_63443070_63443133_63560831
transcript_144827.known	chrX	-	816	3	FSM	ENSG00000235437.9	ENST00000669422.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-29	True	NA	-1	True	AATAAA	-17	NA	63561080	63426557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63426997_63432363_63432492_63560831
transcript_144828.nnic	chrX	-	892	3	NNC	ENSG00000235437.9	novel	816	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	20.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	-29	True	NA	-1	True	AATAAA	-17	NA	63561080	63426557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_63427073_63432363_63432492_63560831
transcript_144829.known	chrX	-	2814	3	FSM	ENSG00000235437.9	ENST00000609143.7	2816	3	0	2	0	0	multi-exon	FALSE	canonical	3	50	junction_2	14	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGCTTCTGTTCCGTTC	NA	False	NA	-3	True	AATAAA	-15	NA	63561095	63426559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63428982_63432363_63432492_63560831
transcript_144831.known	chrX	-	667	2	FSM	ENSG00000235437.9	ENST00000608788.6	667	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTTGGAAAGCTAAGT	16	True	NA	NA	False	AATAAA	-33	NA	63561035	63399440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63399904_63560831
transcript_144832.known	chrX	-	2047	5	FSM	ENSG00000235437.9	ENST00000664356.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	25.4103817366052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTGCTCAGCCTCAAG	21	True	NA	NA	False	AATAAA	-13	NA	63561030	63396737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63398162_63399780_63399904_63432363_63432492_63516909_63517083_63560831
transcript_144833.known	chrX	-	4105	1	FSM	ENSG00000186767.7	ENST00000374884.3	4105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATTATCTTTGTATT	-9	True	NA	-9	True	AATAAA	-20	NA	63351332	63347227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63347200_63351300
transcript_144834.known	chrX	-	5117	11	FSM	ENSG00000131089.17	ENST00000671907.1	5117	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	60.3563584057223	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGTAAAAAGACACCT	17	True	NA	-18	True	NA	NA	NA	63755078	63634983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754303_63754677_63754920
transcript_144837.known	chrX	-	1888	10	FSM	ENSG00000131089.17	ENST00000624210.3	1888	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	49.4573016991225	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACAAAAGTGTTTTCT	17	True	NA	NA	False	NA	NA	NA	63755078	63637839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754920
transcript_144838.known	chrX	-	2143	9	FSM	ENSG00000131089.17	ENST00000623517.3	2143	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	47.3286382647969	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCATTGCTTTTCTTG	-16	True	NA	NA	False	NA	NA	NA	63785558	63637689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63785115
transcript_144844.known	chrX	-	2556	12	FSM	ENSG00000131089.17	ENST00000495564.5	2556	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	77.6885070794349	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTCCATTTTTACC	58	False	NA	NA	False	NA	NA	NA	63755143	63637745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63674037_63674168_63678339_63678573_63697124_63697305_63701489_63701643_63703169_63703285_63706257_63706450_63724531_63724712_63754303_63754677_63754920
transcript_144845.known	chrX	-	787	1	FSM	ENSG00000131089.17	ENST00000623951.1	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTCGTGTCTTGTCT	25	True	NA	NA	False	NA	NA	NA	63755070	63754283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63754300_63755100
transcript_144846.known	chrX	-	2154	9	FSM	ENSG00000131089.17	ENST00000624843.3	2154	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	54.5435605731786	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTATAGATGGACCT	32	True	NA	-30	True	AATAAA	-11	NA	63755063	63637984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63754314
transcript_144847.known	chrX	-	5413	10	FSM	ENSG00000131089.17	ENST00000253401.10	5413	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	49.1709037722287	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	-18	True	NA	-1	True	AATAAA	-16	NA	63755113	63634966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754303
transcript_144851.known	chrX	-	2660	14	FSM	ENSG00000102043.16	ENST00000374852.4	2660	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	14.0211167877716	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGGTATGCTTAGTCA	-10	True	NA	NA	False	AATAAA	-17	NA	64395452	64268080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64269044_64270946_64271074_64328771_64328901_64331556_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
transcript_144852.known	chrX	-	2724	5	FSM	ENSG00000126970.16	ENST00000374839.8	2724	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	37.1306813834597	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAAAATATTAGCACTT	-8	True	NA	4	True	AATAAA	-35	NA	64976450	64915806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_64976324
transcript_144854.known	chrX	-	606	5	FSM	ENSG00000126970.16	ENST00000488831.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	70.6275442019613	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCAAGAGTCGGTCCCG	61	False	NA	-42	True	NA	NA	NA	65034669	64917839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_65034628
transcript_144855.known	chrX	-	2363	5	FSM	ENSG00000126970.16	ENST00000337990.2	2363	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	82.5121203218048	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTGGGTAGCTCTTG	17	True	NA	-12	True	AATACA	-19	NA	65034713	64916381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64922244_65034628
transcript_144860.known	chrX	-	841	5	FSM	ENSG00000126970.16	ENST00000476032.1	841	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	80.8099622571376	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCCTCTTTGCAA	138	False	NA	-60	True	NA	NA	NA	64976363	64917857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64922244_64976324
transcript_144862.known	chrX	-	806	5	FSM	ENSG00000126970.16	ENST00000492653.5	806	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.3196403293412	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAGAGCACATGAAGCT	8	True	NA	18	True	AATAAA	-3	NA	64976473	64917779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919237_64920080_64920254_64921816_64921989_64976324
transcript_144865.known	chrX	-	2470	14	FSM	ENSG00000001497.18	ENST00000374811.8	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	217.568951187227	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	-21	True	NA	-1	True	AATAAA	-13	NA	65534787	65512581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_144869.known	chrX	-	2386	13	FSM	ENSG00000001497.18	ENST00000374807.9	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_5	75.8423071613434	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	12	True	NA	-1	True	AATAAA	-13	NA	65534754	65512581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_144873.known	chrX	-	2261	12	FSM	ENSG00000001497.18	ENST00000374804.9	2261	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	220.125283636087	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGTGTTTGTGAGAT	10	True	NA	-2	True	AATAAA	-12	NA	65534756	65512582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65534479
transcript_14488.nnic	chr1	-	1348	2	NNC	ENSG00000182118.8	novel	1503	2	NA	NA	-896	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGTGTCATGTGTTAT	332	False	NA	-19	True	GATAAA	-9	NA	231041150	231018962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_231020127_231040966
transcript_144880.known	chrX	-	2324	12	FSM	ENSG00000001497.18	ENST00000678823.1	2324	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	299.848088259802	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAACACAGAACTTGGC	-32	True	NA	NA	False	NA	NA	NA	65534798	65520494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_144886.known	chrX	-	2301	11	FSM	ENSG00000001497.18	ENST00000676986.1	2301	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	240.481371419908	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCCCAGAGAAAAAATAAAA	-32	True	NA	NA	False	NA	NA	NA	65534798	65520466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_144888.known	chrX	-	6355	15	FSM	ENSG00000001497.18	ENST00000679056.1	6355	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	318.066359717078	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAACAGGCAACTGT	NA	False	NA	12	True	NA	NA	NA	65534810	65512602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65522286_65522430_65522494_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_144890.known	chrX	+	3960	13	FSM	ENSG00000147065.17	ENST00000360270.7	3960	13	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_6	68.1229994609424	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTCAATCGTTCTTT	0	True	NA	24	True	AATAAA	-17	NA	65667653	65741931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_65667854_65716817_65716902_65727813_65727910_65729437_65729713_65731106_65731191_65731837_65731985_65733183_65733281_65735266_65735431_65736794_65736926_65737177_65737339_65738524_65738618_65738969_65739195_65739728
transcript_144894.known	chrX	+	4310	21	FSM	ENSG00000089472.18	ENST00000441993.7	4310	21	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_20	44.6470603735565	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAAGACTGAATTTGGTG	-6	True	NA	21	True	ATTAAA	-16	NA	66164358	66267383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266442
transcript_14490.known	chr1	-	1432	7	FSM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	32.5149538246977	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGACTGTTAAGT	-19	True	NA	-20	True	AATAAA	-17	NA	231241178	231223762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_144900.known	chrX	-	3455	7	FSM	ENSG00000131080.15	ENST00000374719.8	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.4457515435365	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	-4	True	NA	-16	True	AATAAA	-19	NA	66639078	66595636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
transcript_144904.known	chrX	+	10667	8	FSM	ENSG00000169083.18	ENST00000374690.9	10667	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.89968330431206	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATGTCATCAGAGTTC	-14	True	NA	12	True	CATAAA	-17	NA	67544020	67730619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_67546763_67643255_67643408_67686009_67686127_67711401_67711690_67717477_67717623_67721832_67721964_67722826_67722985_67723685
transcript_144907.known	chrX	-	3296	9	FSM	ENSG00000079482.14	ENST00000679914.1	3296	9	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1.86664806538351	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAGAAAGAAAG	-34	True	NA	NA	False	AAGAAA	-44	NA	68433522	68208047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_68210283_68212107_68212213_68213861_68213973_68234486_68234589_68274737_68274810_68283055_68283118_68299000_68299097_68432866_68433025_68433167
transcript_14491.known	chr1	-	1430	7	FSM	ENSG00000143633.13	ENST00000366649.7	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	31.0129901098807	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCTGTGACTGTTAA	-16	True	NA	-22	True	AATAAA	-15	NA	231241175	231223764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
transcript_144910.known	chrX	-	621	3	FSM	ENSG00000079482.14	ENST00000681520.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGCAAACACATTCAAAA	621	False	NA	NA	False	AATAGA	-36	NA	68433211	68380492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_68380912_68432866_68433025_68433167
transcript_144912.known	chrX	-	2189	3	FSM	ENSG00000079482.14	ENST00000680804.1	2189	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTATATTTTG	531	False	NA	NA	False	AATAAA	-37	NA	68433301	68411118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_68413016_68432866_68433025_68433167
transcript_144913.known	chrX	-	598	3	FSM	ENSG00000079482.14	ENST00000491714.2	598	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGTCGCATTCTTCCC	NA	False	NA	NA	False	AATAAA	-21	NA	68433913	68412858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_68413016_68432866_68433025_68433630
transcript_144915.known	chrX	-	1247	2	FSM	ENSG00000079482.14	ENST00000681349.1	1247	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGATTGTGAAAAATAA	537	False	NA	NA	False	NA	NA	NA	68433295	68431905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_68433025_68433167
transcript_14492.known	chr1	-	795	6	FSM	ENSG00000143633.13	ENST00000451322.1	795	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	73.428604780426	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAACAACTGAGTCAAC	69	False	NA	NA	False	AATAAA	-7	NA	231241090	231224254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231238856_231239189_231241023
transcript_144921.known	chrX	+	734	7	FSM	ENSG00000181704.12	ENST00000374643.7	734	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	111.660198817663	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTCTCACCTTTACT	6	True	NA	-45	True	NA	NA	NA	68499048	68531970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_68499158_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_144924.known	chrX	+	6134	6	FSM	ENSG00000181704.12	ENST00000374622.3	6134	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	117.114644686307	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	NA	False	NA	2	True	ATTAAA	-10	NA	68498781	68537266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_68499124_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_14493.nic	chr1	-	1007	5	ISM	ENSG00000143633.13	ENST00000366651.7	1432	7	-299	2995	-290	-372	5prime_fragment	FALSE	canonical	3	115	junction_3	38.2385603808512	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAAAAGAGACTGG	NA	False	NA	NA	False	ATTAAA	-18	NA	231241477	231226757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_144934.known	chrX	+	6010	7	FSM	ENSG00000181704.12	ENST00000462683.6	6010	7	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_6	25.660713595343	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTGTGTGCCTATTC	8	True	NA	18	True	ATTAAA	-26	NA	68499050	68537282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_68499124_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_144935.known	chrX	+	375	1	FSM	ENSG00000236735.3	ENST00000422565.1	375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATCACTGATCATCAAAA	NA	False	NA	NA	False	NA	NA	NA	68600098	68600473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_68600100_68600500
transcript_144937.known	chrX	-	887	2	FSM	ENSG00000181191.12	ENST00000477231.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGAGGGAGAGGCGAG	20	True	NA	NA	False	NA	NA	NA	69165449	69162325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_69163135_69165371
transcript_144938.known	chrX	-	574	2	FSM	ENSG00000181191.12	ENST00000590146.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAGATGATAAGCTGT	18	True	NA	NA	False	GGGGCT	-42	NA	69165451	69162804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_69163299_69165371
transcript_144939.known	chrX	-	2755	2	FSM	ENSG00000181191.12	ENST00000361478.1	2755	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATAATGGAATTTT	-3	True	NA	-19	True	ATTAAA	-18	NA	69165521	69160861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_69163467_69165371
transcript_14494.nic	chr1	-	1010	5	ISM	ENSG00000143633.13	ENST00000366649.7	1430	7	-302	2993	-290	-372	5prime_fragment	FALSE	canonical	3	120	junction_3	36.0901648652372	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAGAAAAGAGACTGG	NA	False	NA	NA	False	ATTAAA	-18	NA	231241477	231226757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
transcript_144941.known	chrX	-	2692	1	FSM	ENSG00000181191.12	ENST00000374583.1	2692	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGGAATTTTTTGGTTTT	1973	False	NA	-11	True	ATTAAA	-26	NA	69163545	69160853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_69160900_69163500
transcript_144944.known	chrX	+	1682	7	FSM	ENSG00000089289.16	ENST00000356413.5	1682	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	110.561697205175	2789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	-16	True	NA	30	True	AATAAA	-33	NA	70133446	70166324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70133541_70133722_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_144948.known	chrX	+	1862	6	FSM	ENSG00000089289.16	ENST00000342206.10	1862	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	10.2683981223947	2812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	-14	True	NA	30	True	AATAAA	-33	NA	70133448	70166324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_144949.known	chrX	+	4388	31	FSM	ENSG00000090889.12	ENST00000374403.4	4388	31	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_12	26.2412948528756	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGCTATTAA	5	True	NA	9	True	AATAAA	-21	NA	70290103	70420886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
transcript_144953.nic	chrX	+	2539	21	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-117	25094	-117	-25094	5prime_fragment	FALSE	canonical	3	171	junction_12	21.9259549392951	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCTGGGGAGAATCCAC	7848	False	NA	NA	False	AAGAAA	-5	NA	70289986	70395792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670
transcript_14496.known	chr1	-	2657	2	FSM	ENSG00000143633.13	ENST00000471936.1	2657	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTCTTCAAATGTCT	-28	True	NA	NA	False	CATAAA	-17	NA	231241187	231236695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231239189_231241023
transcript_144961.nic	chrX	+	861	6	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-117	118827	-117	4871	5prime_fragment	FALSE	canonical	3	196	junction_1	21.3541565040626	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAAGTAAGTTACAATT	7848	False	NA	NA	False	AAGAAA	-6	NA	70289986	70302059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899
transcript_144976.known	chrX	-	991	7	FSM	ENSG00000120509.11	ENST00000239666.9	991	7	0	0	0	0	multi-exon	TRUE	canonical	3	286	junction_6	39.9781190152813	1582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	-7	True	NA	-23	True	AGTAAA	-18	NA	70289927	70286594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
transcript_14498.known	chr1	+	2685	17	FSM	ENSG00000116906.13	ENST00000644483.1	2685	17	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	155.93828907616	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTAGCTTGCTTTAATT	3	True	NA	20	True	ATTAAA	-28	NA	231241215	231277933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231241457_231250960_231251144_231258221_231258310_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_144985.known	chrX	+	1993	16	FSM	ENSG00000130055.14	ENST00000374382.4	1993	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	23.5509848815052	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	-5	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_144988.known	chrX	+	2171	15	FSM	ENSG00000130055.14	ENST00000536730.5	2171	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	38.2115486336211	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	9	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70423383_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_144995.known	chrX	+	2067	14	FSM	ENSG00000130055.14	ENST00000538649.5	2067	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	36.4383243205549	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	9	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70423383_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_145006.known	chrX	+	4529	12	FSM	ENSG00000082458.12	ENST00000542398.1	4529	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	27.9754910443687	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGACCAGCTTTGTCT	-3	True	NA	7	True	AATAAA	-19	NA	70455095	70505485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70455264_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_145017.known	chrX	-	395	2	FSM	ENSG00000231651.1	ENST00000431103.1	395	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCCCTCTGTAAAAG	NA	False	NA	NA	False	AATAAA	-14	NA	70455994	70452961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70453307_70455944
transcript_145018.known	chrX	+	794	7	FSM	ENSG00000082458.12	ENST00000461646.1	794	7	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	24.3704055499014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCCCCTTTTTTAGATA	NA	False	NA	-8	True	NA	NA	NA	70497164	70502371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_145033.known	chrX	-	2239	12	FSM	ENSG00000165349.12	ENST00000374299.8	2239	12	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_11	108.585419778301	3347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCCTGTTTTTTGCTT	-1	True	NA	-24	True	AATAAA	-1	NA	70931096	70925578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70930023_70930976
transcript_145034.known	chrX	-	2235	12	FSM	ENSG00000165349.12	ENST00000298085.4	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_11	123.477103307951	2605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTGTGTCCTGT	NA	False	NA	-33	True	ATTAAA	-10	NA	70931125	70925587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
transcript_145035.known	chrX	+	330	1	FSM	ENSG00000230629.2	ENST00000429775.2	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3712	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATGGTGAAAACCCT	NA	False	NA	-54	True	NA	NA	NA	70962963	70963293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70963000_70963300
transcript_145036.nnic	chrX	-	986	6	NNC	ENSG00000147164.12	novel	2422	5	NA	NA	12	29010	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5463442476886	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTGTGCATATTTT	-24	True	NA	NA	False	AATAAA	-16	NA	71068436	71027321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_71027583_71029308_71029427_71061027_71061119_71061842_71061968_71062853_71062950_71068141
transcript_145037.known	chrX	-	720	4	FSM	ENSG00000147164.12	ENST00000276105.3	720	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.33999733546454	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCATGTGGGCACTCTGC	9	True	NA	84	True	NA	NA	NA	71068403	71060869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71061119_71061842_71061968_71062853_71062950_71068153
transcript_14504.known	chr1	+	2641	16	FSM	ENSG00000116906.13	ENST00000366647.9	2641	16	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_9	45.7906346562506	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTGAAAGAGATATTT	-1	True	NA	60	True	ATTAAA	-18	NA	231241211	231277973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231241457_231250960_231251144_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_145040.known	chrX	-	946	3	FSM	ENSG00000147164.12	ENST00000465030.1	946	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTCTTAACAGTTTCT	24	True	NA	NA	False	NA	NA	NA	71068388	71060515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71061119_71062853_71062950_71068141
transcript_145041.nic	chrX	-	866	2	ISM	ENSG00000147164.12	ENST00000465030.1	946	3	-48	1863	12	-1509	5prime_fragment	FALSE	canonical	3	17	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGAAAGTGGTA	-24	True	NA	NA	False	NA	NA	NA	71068436	71062378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_71062950_71068141
transcript_145043.nnic	chrX	+	1895	4	NNC	ENSG00000184481.17	novel	3644	3	NA	NA	93	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.9411254969543	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	95	False	NA	30	True	AATAAA	-30	NA	71095943	71103532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_71096011_71101220_71101386_71101533_71101741_71102076
transcript_145044.known	chrX	+	3644	3	FSM	ENSG00000184481.17	ENST00000374259.8	3644	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	10.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	2	True	NA	30	True	AATAAA	-30	NA	71095850	71103532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71096982_71100683_71101741_71102076
transcript_145045.nic	chrX	+	2717	3	NIC	ENSG00000184481.17	novel	306	2	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	35.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	1547	False	NA	30	True	AATAAA	-30	NA	71099249	71103532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_71099454_71100683_71101741_71102076
transcript_145046.nic	chrX	-	437	3	ISM	ENSG00000204165.6	ENST00000374251.6	834	6	1768	98	-524	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGGTGTGAAATTACTG	6601	False	NA	NA	False	AATAAA	-40	NA	71104972	71103986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_71104113_71104297_71104405_71104768
transcript_145047.known	chrX	-	277	2	FSM	ENSG00000204165.6	ENST00000466160.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGGTGTGAAATTACTG	7125	False	NA	NA	False	AATAAA	-40	NA	71104448	71103986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71104113_71104297
transcript_145048.known	chrX	+	6925	45	FSM	ENSG00000184634.17	ENST00000374080.8	6925	45	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_39	30.1613087490338	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGTGTGCGAGTTCTGCA	-17	True	NA	24	True	AATACA	-18	NA	71118595	71142450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137384_71137557_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
transcript_145049.known	chrX	+	6977	45	FSM	ENSG00000184634.17	ENST00000374102.6	6901	45	-73	-3	0	3	multi-exon	TRUE	canonical	3	69	junction_9	25.1833770439717	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGCGAGTTCTGCATGT	12	True	NA	27	True	AATACA	-21	NA	71118555	71142453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71118854_71119372_71119478_71119685_71119878_71120013_71120171_71120970_71121153_71121326_71121438_71121561_71121817_71122199_71122347_71122507_71122608_71122737_71122875_71123094_71123227_71123593_71123721_71124158_71124389_71124763_71124845_71124975_71125147_71125350_71125496_71125662_71125714_71126035_71126155_71126340_71126485_71126968_71127133_71127335_71127468_71127892_71128121_71128295_71128441_71128597_71128719_71129113_71129216_71129315_71129430_71129679_71129856_71130034_71130215_71131549_71131622_71132072_71132207_71132376_71132539_71132844_71132957_71133122_71133213_71134356_71134467_71134712_71134849_71135091_71135254_71136280_71136656_71136878_71137030_71137186_71137393_71137557_71137636_71137725_71137944_71140634_71140858_71141229_71141371_71141882_71141965_71142174
transcript_145050.known	chrX	+	3975	8	FSM	ENSG00000196338.15	ENST00000358741.4	3975	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	32.3633705769662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCCTTGCACAGGC	-4	True	NA	12	True	AATAAA	-22	NA	71144840	71171201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71144965_71147549_71148207_71148845_71148906_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
transcript_145051.known	chrX	+	3913	7	FSM	ENSG00000196338.15	ENST00000374051.7	3913	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.2916277258227	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCCCTTGCACAGGC	-2	True	NA	12	True	AATAAA	-22	NA	71144842	71171201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71144965_71147549_71148207_71153476_71153537_71155213_71155364_71164142_71164329_71167010_71167801_71169253
transcript_145052.known	chrX	+	1862	5	FSM	ENSG00000196338.15	ENST00000395855.7	2842	5	22	958	0	-948	multi-exon	FALSE	canonical	2	5	junction_2	44.7737367214308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTCGTCATGACCTAT	-2	True	NA	NA	False	NA	NA	NA	71144842	71167757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71144965_71147549_71148207_71155213_71155364_71164142_71164329_71167010
transcript_145053.known	chrX	+	1603	2	FSM	ENSG00000169562.13	ENST00000647424.1	1603	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTCAAGTTCTTTCTC	NA	False	NA	NA	False	ATTAAA	-35	NA	71215211	71225215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71215291_71223691
transcript_145054.known	chrX	+	1625	2	FSM	ENSG00000169562.13	ENST00000374029.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGTGGCTTGTGTGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	71215155	71225200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71215272_71223691
transcript_145056.known	chrX	+	1710	12	FSM	ENSG00000147140.17	ENST00000450092.6	1710	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	756.820666116589	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	71	False	NA	NA	False	NA	NA	NA	71283760	71300076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283989_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_145057.known	chrX	+	1520	12	FSM	ENSG00000147140.17	ENST00000454976.2	1520	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	757.095330089266	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	205	False	NA	NA	False	NA	NA	NA	71284193	71300076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71284232_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_145060.known	chrX	-	1841	7	FSM	ENSG00000147130.14	ENST00000373981.5	1841	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	47.9826357480843	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTCAGCCTCTCCTT	702	False	NA	-3	True	AATAAA	-15	NA	71254575	71249203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254480
transcript_145066.nnic	chrX	+	1097	4	NNC	ENSG00000147140.17	novel	3208	11	NA	NA	-82	-13382	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	5.31245915016974	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGTGGACTCTCTT	NA	False	NA	13	True	AATAAA	-22	NA	71254731	71272792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_71255001_71264841_71265065_71266630_71266728_71272284
transcript_145067.known	chrX	-	1867	7	FSM	ENSG00000147130.14	ENST00000373982.5	1867	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	55.9871016891887	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	13	True	NA	0	True	AATAAA	-18	NA	71254140	71249200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251251_71251557_71251602_71252588_71253275_71254028
transcript_145068.known	chrX	+	2812	13	FSM	ENSG00000147140.17	ENST00000420903.6	2812	13	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	911.735615917977	6950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	373	False	NA	24	True	ATTAAA	-13	NA	71283589	71301160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_145069.known	chrX	+	2868	13	FSM	ENSG00000147140.17	ENST00000677446.1	2868	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	722.764268278392	10485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	17	False	NA	32	True	ATTAAA	-21	NA	71254813	71301168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71255001_71283614_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_145070.known	chrX	+	2606	11	FSM	ENSG00000147140.17	ENST00000373841.5	2606	11	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_1	640.065496648585	8170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	0	True	NA	32	True	ATTAAA	-21	NA	71283632	71301168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_145071.known	chrX	+	987	3	FSM	ENSG00000147140.17	ENST00000678414.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1080.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATTAAATGATATAAATG	8	True	NA	NA	False	NA	NA	NA	71283640	71286213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71285364
transcript_145072.known	chrX	+	3596	10	FSM	ENSG00000147140.17	ENST00000678323.1	3596	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	810.923616076823	6823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	-23	True	NA	22	True	ATTAAA	-11	NA	71283609	71301158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297360_71298509_71298706_71298817_71299941
transcript_145073.known	chrX	+	3206	11	FSM	ENSG00000147140.17	ENST00000473525.2	3206	11	0	0	0	0	multi-exon	FALSE	canonical	3	2046	junction_2	254.547146909959	6909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	-23	True	NA	22	True	ATTAAA	-11	NA	71283609	71301158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71298509_71298706_71298817_71299941
transcript_145074.known	chrX	+	2744	13	FSM	ENSG00000147140.17	ENST00000678231.1	2744	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	962.958242287218	6760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	19	True	NA	24	True	ATTAAA	-13	NA	71283651	71301160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71288426_71288535_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_145075.known	chrX	+	2483	12	FSM	ENSG00000147140.17	ENST00000677879.1	2483	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	757.892510750198	6848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	-8	True	NA	24	True	ATTAAA	-13	NA	71283624	71301160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294349_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_145076.known	chrX	+	1439	10	FSM	ENSG00000147166.11	ENST00000538820.1	1439	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.89215404065849	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGGAGAACAAAATTGTCC	38	False	NA	-49	True	NA	NA	NA	71301786	71305301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71302187_71302276_71302334_71302410_71302557_71303261_71303357_71303460_71303517_71303626_71303698_71303811_71303912_71304186_71304301_71304541_71304605_71304964
transcript_145077.known	chrX	-	640	2	FSM	ENSG00000224208.1	ENST00000436372.1	640	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTTGCCCTAGCACA	NA	False	NA	NA	False	GATAAA	-41	NA	71315879	71314911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71315303_71315630
transcript_145078.nnic	chrX	-	1126	2	Antisense	novelGene_ENSG00000147133.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	NA	False	NA	NA	False	TTTAAA	-16	NA	71502141	71494450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_71495321_71501885
transcript_145080.nnic	chrX	-	804	2	Antisense	novelGene_ENSG00000147133.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGGGCCCATGCCACC	NA	False	NA	NA	False	AATAAA	-16	NA	71502141	71494772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_71495321_71501885
transcript_145082.known	chrX	+	5435	22	FSM	ENSG00000147162.14	ENST00000373719.8	5435	22	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	60.8444356656706	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	-2	True	NA	19	True	AATAAA	-19	NA	71533103	71575892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_145086.nic	chrX	+	1413	4	ISM	ENSG00000147162.14	ENST00000498566.3	601	5	-227	990	-31	666	5prime_fragment	FALSE	canonical	3	185	junction_3	10.4986771653491	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACCCCTTAAAAAAAAGGT	-3	True	NA	NA	False	NA	NA	NA	71533072	71545290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566
transcript_145087.known	chrX	+	7243	20	FSM	ENSG00000147162.14	ENST00000488174.5	7243	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	94.3436577718548	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACCTGTTTCACCAGT	-2	True	NA	NA	False	AATATA	-20	NA	71533103	71574655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71533337_71536207_71536359_71537828_71538073_71544566_71548024_71554512_71554593_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_145088.known	chrX	+	3310	22	FSM	ENSG00000147162.14	ENST00000373701.7	3310	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	79.9932253367324	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTATACCTGAGCCTCA	17	False	NA	6	True	AATAAA	-18	NA	71533122	71573816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71533337_71536207_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_145090.known	chrX	+	691	3	FSM	ENSG00000147174.12	ENST00000471950.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCAGGATTGGCTGCTAC	4742	False	NA	NA	False	NA	NA	NA	71609065	71612854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71609118_71610680_71610820_71612354
transcript_145092.known	chrX	+	4113	3	FSM	ENSG00000281852.1	ENST00000627173.1	4113	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71697195	71706455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71697302_71700820_71701044_71702671
transcript_145093.known	chrX	-	532	5	FSM	ENSG00000215115.7	ENST00000452468.1	532	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGTGGTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	71716387	71714370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71714545_71714650_71714693_71715246_71715293_71715574_71715652_71716194
transcript_145094.known	chrX	+	532	5	FSM	ENSG00000215113.7	ENST00000440412.1	532	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGTGGTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	71765187	71767204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71765381_71765923_71766001_71766282_71766329_71766882_71766925_71767030
transcript_145095.nnic	chrX	-	563	6	NNC	ENSG00000283178.1	novel	1552	5	NA	NA	1601	242	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	7.87400787401181	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTGTGGTCTGC	-3	True	NA	NA	False	AATAAA	-13	NA	71871694	71869520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_71869656_71869761_71869804_71870355_71870402_71870681_71870759_71871317_71871475_71871588
transcript_145097.nnic	chrX	-	639	6	NNC	ENSG00000283178.1	novel	1552	5	NA	NA	1049	242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.95767827062348	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTGTGGTCTGC	1230	False	NA	NA	False	AATAAA	-13	NA	71872246	71869520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_71869656_71869761_71869804_71870355_71870402_71870681_71870759_71871317_71871475_71872064
transcript_1451.known	chr1	+	626	4	FSM	ENSG00000251503.8	ENST00000470413.6	626	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	123.381071842033	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	307	False	NA	15	True	AATAAA	-16	NA	10430383	10451659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10451376
transcript_145100.nnic	chrX	-	546	5	NNC	ENSG00000283178.1	novel	1552	5	NA	NA	1732	242	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	4.03112887414927	131	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTGTGGTCTGC	1913	False	NA	NA	False	AATAAA	-13	NA	71871563	71869520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_71869656_71869761_71869804_71870355_71870402_71870681_71870759_71871317
transcript_145101.nnic	chrX	-	572	5	NNC	ENSG00000283178.1	novel	1552	5	NA	NA	1732	242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.90896059130321	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTGTGGTCTGC	1913	False	NA	NA	False	AATAAA	-13	NA	71871563	71869520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_71869656_71869761_71869830_71870355_71870402_71870681_71870759_71871317
transcript_145107.known	chrX	+	348	1	FSM	ENSG00000196933.5	ENST00000463445.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	72044544	72044892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72044500_72044900
transcript_145112.known	chrX	+	1239	4	FSM	ENSG00000102309.15	ENST00000373669.8	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_1	148.236297849076	3995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTGATTCTTAACAGA	7	True	NA	NA	False	AATAAA	-15	NA	72181756	72198340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72181829_72186460_72186535_72196784_72196905_72197367
transcript_145119.known	chrX	+	1780	3	FSM	ENSG00000102309.15	ENST00000218432.10	1780	3	0	0	0	0	multi-exon	FALSE	canonical	3	885	junction_1	94.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTATGTGATTCTTAAC	NA	False	NA	NA	False	AATAAA	-12	NA	72181675	72198337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72181829_72186460_72186535_72196784
transcript_145121.nnic	chrX	+	489	3	NIC	ENSG00000102309.15	novel	1323	4	NA	NA	-38	191	combination_of_known_splicesites	FALSE	canonical	3	423	junction_1	412.5	2794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTATACATTTTGTT	NA	False	NA	12	True	AATAAA	-19	NA	72181637	72197545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_72181829_72196784_72196905_72197367
transcript_145124.known	chrX	-	4344	3	FSM	ENSG00000186871.7	ENST00000373657.2	4344	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACTTTGTTTCACTGA	-31	True	NA	-6	True	ATTAAA	-23	NA	72239027	72204656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72208699_72237830_72237949_72238843
transcript_145126.known	chrX	-	4218	2	FSM	ENSG00000186871.7	ENST00000334463.4	4218	2	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTCCATCCACTTTGT	-31	True	NA	-14	True	ATTAAA	-15	NA	72239027	72204664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72208699_72238843
transcript_145167.known	chrX	-	1474	7	FSM	ENSG00000198034.11	ENST00000316084.10	1474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9708	junction_6	1404.93534845321	82240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGGTCATGTCAGGC	7	True	NA	85	True	CATAAA	-21	NA	72277248	72272041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
transcript_145168.known	chrX	-	1752	12	FSM	ENSG00000285547.1	ENST00000648922.1	1752	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.6720772412265	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGACCGAGCCAATG	-11	True	NA	NA	False	NA	NA	NA	72572843	72301810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72302245_72302809_72302935_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145171.known	chrX	-	1231	3	FSM	ENSG00000125931.11	ENST00000246139.9	1231	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACGGGCCAACTAGAGGT	-11	True	NA	-13	True	AATAAA	-43	NA	72306987	72301649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72302245_72302809_72302935_72306476
transcript_145173.known	chrX	-	886	3	FSM	ENSG00000125931.11	ENST00000373619.7	886	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGCCAACTAGAGGTGTT	NA	False	NA	-10	True	AATAAA	-22	NA	72307187	72301646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72302245_72302809_72302935_72307024
transcript_145176.known	chrX	-	1785	12	FSM	ENSG00000147099.21	ENST00000647594.1	1785	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.6622744099947	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGTTATATATCT	-33	True	NA	-53	True	NA	NA	NA	72572865	72329567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72330815_72330877_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145178.known	chrX	-	1716	12	FSM	ENSG00000147099.21	ENST00000648731.1	1716	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.6168973503862	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGGTGTTGTTTTAGTG	397	False	NA	-63	True	NA	NA	NA	72572681	72329577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72494195_72494382_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145180.known	chrX	-	1865	12	FSM	ENSG00000147099.21	ENST00000648452.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	70.1458928305267	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAATCTTTGAAAACC	-33	True	NA	-23	True	NA	NA	NA	72572865	72329537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72330657_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145181.known	chrX	-	1479	12	FSM	ENSG00000147099.21	ENST00000649274.1	1479	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	67.306993729914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAACAGATCAGAAGCT	374	False	NA	NA	False	NA	NA	NA	72572704	72329724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572105_72572650
transcript_145184.known	chrX	-	1700	11	FSM	ENSG00000147099.21	ENST00000647980.1	1700	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.183457147538	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGTTATATATCT	-15	True	NA	-53	True	NA	NA	NA	72572847	72329567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491001_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145187.known	chrX	-	1274	10	FSM	ENSG00000147099.21	ENST00000415409.6	1274	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	69.9393034912381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGGAAAAGAATGTAAAG	-11	True	NA	NA	False	AATAAA	-10	NA	72572843	72385108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72385296_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145188.known	chrX	-	1710	10	FSM	ENSG00000147099.21	ENST00000373583.6	1710	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	52.9914971050271	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	201	False	NA	-1	True	AATAAA	-16	NA	72572877	72329515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145189.known	chrX	-	1516	10	FSM	ENSG00000147099.21	ENST00000647654.1	1516	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	68.3072217500454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATATATCTTTGGTTTTT	-11	True	NA	-44	True	NA	NA	NA	72572843	72329558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72330690_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
transcript_145190.known	chrX	-	1484	10	FSM	ENSG00000147099.21	ENST00000648834.1	1484	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.7590208335404	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTTTAAGATGAGAAAAGT	14	True	NA	NA	False	AGTAAA	-4	NA	72572818	72351420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72351839_72462003_72462103_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145191.known	chrX	-	1909	10	FSM	ENSG00000147099.21	ENST00000478743.2	1909	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.6423377319788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAATACATAAAAATTAT	-15	True	NA	NA	False	ATTAAA	-3	NA	72572847	72421654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72422476_72462003_72462096_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145193.known	chrX	-	1695	9	FSM	ENSG00000147099.21	ENST00000373589.9	1695	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	61.9430181699278	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATATATCTTTGGTTTT	NA	False	NA	-45	True	NA	NA	NA	72573101	72329559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72572056_72572110_72572650
transcript_145197.known	chrX	-	2079	8	FSM	ENSG00000147099.21	ENST00000648036.1	2079	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.1715934437334	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATAAATGTTAGCTGT	22	True	NA	-16	True	AATAAA	-3	NA	72572810	72473430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72474730_72488932_72489042_72490928_72491001_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145200.known	chrX	-	2044	7	FSM	ENSG00000147099.21	ENST00000650126.1	2044	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	74.0645364230112	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATAAATGTTAGCTGT	-15	True	NA	-16	True	AATAAA	-3	NA	72572847	72473430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72474730_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145202.known	chrX	-	1367	6	FSM	ENSG00000147099.21	ENST00000650604.1	1367	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.3819546969957	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGTTATATATCT	NA	False	NA	-53	True	NA	NA	NA	72573081	72329567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72572056_72572110_72572650
transcript_145204.known	chrX	-	829	5	FSM	ENSG00000147099.21	ENST00000373560.7	829	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.8624613440851	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTCATGTATTCATTT	2	True	NA	NA	False	NA	NA	NA	72572830	72474406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72474730_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145205.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000650636.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	82.0041919660209	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCGTATAATGACTT	16	True	NA	0	True	TATAAA	-17	NA	72572816	72562219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72562475_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145207.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000373556.8	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	71.2916544905503	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	-24	True	NA	1	True	AATAAA	-21	NA	72572856	72567581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72567797_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145209.known	chrX	-	836	4	FSM	ENSG00000147099.21	ENST00000373554.6	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	12.7104506432917	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	-21	True	NA	1	True	AATAAA	-21	NA	72572853	72567581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145211.known	chrX	-	330	2	FSM	ENSG00000147099.21	ENST00000486704.1	330	2	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTGAAAGTATTCACAG	16	True	NA	NA	False	NA	NA	NA	72572816	72571945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72572110_72572650
transcript_145212.known	chrX	-	1941	11	FSM	ENSG00000147099.21	ENST00000649543.1	1941	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	72.9421688737043	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGAGACCCTGTCCCAA	16	True	NA	NA	False	NA	NA	NA	72572816	72351143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72494195_72494382_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145213.known	chrX	-	1924	6	FSM	ENSG00000147099.21	ENST00000648962.1	1924	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	73.652155433497	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTCATCATTATTAT	11	True	NA	-1	True	AATAAA	-18	NA	72572821	72473415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72474730_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_145214.known	chrX	-	6121	31	FSM	ENSG00000067177.15	ENST00000339490.7	6121	31	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_18	7.47261667690776	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGTTTTTGTGATTGG	124	False	NA	-2	True	ATTAAA	-30	NA	72714181	72578814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72581176_72582397_72582599_72584248_72584303_72593103_72593275_72602157_72602274_72603118_72603221_72605270_72605401_72605540_72605620_72609623_72609704_72611027_72611185_72618709_72618850_72619213_72619306_72620724_72620902_72623108_72623276_72626970_72627050_72635154_72635300_72636276_72636387_72644361_72644497_72650389_72650469_72652543_72652652_72653434_72653531_72656119_72656243_72657587_72657642_72666150_72666298_72667374_72667474_72676069_72676151_72684497_72684581_72695707_72695877_72705197_72705246_72712778_72712938_72713802
transcript_145215.known	chrX	+	1460	7	FSM	ENSG00000184911.15	ENST00000334036.10	1460	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.37436854187255	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATATACGGGTTGTTTG	2	True	NA	NA	False	AATAAA	-21	NA	72776889	72848803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72777249_72845041_72845200_72845498_72845558_72845871_72846006_72846884_72846946_72847129_72847278_72848262
transcript_145220.known	chrX	+	1490	1	FSM	ENSG00000269911.1	ENST00000602508.1	1490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCATCGACTCATTT	720	False	NA	NA	False	AATAAA	-19	NA	72777607	72779097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72777600_72779100
transcript_145221.known	chrX	-	1363	7	FSM	ENSG00000269502.6	ENST00000615063.2	1363	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.37436854187255	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGATATACGGGTTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	72943837	72872024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72872565_72873549_72873698_72873881_72873943_72874824_72874959_72875272_72875332_72875630_72875789_72943574
transcript_14523.nic	chr1	+	659	3	ISM	ENSG00000116906.13	ENST00000416000.1	1924	13	-30	14557	-21	-5380	5prime_fragment	FALSE	canonical	3	463	junction_2	17	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGTCTCATCTTAA	11	False	NA	NA	False	AATAAA	-2	NA	231241185	231260711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_231241457_231250960_231251144_231260506
transcript_145233.known	chrX	-	2044	1	FSM	ENSG00000204118.2	ENST00000373518.1	2044	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGCCTTCTCATTGAG	0	True	NA	-9	True	AATAAA	-17	NA	73128080	73126036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_73126000_73128100
transcript_145234.known	chrX	-	2553	1	FSM	ENSG00000186462.9	ENST00000373517.4	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTATTTCTTGTTAT	-12	True	NA	2	True	AATAAA	-36	NA	73214851	73212298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_73212300_73214900
transcript_145235.known	chrX	+	435	1	FSM	ENSG00000230311.2	ENST00000427861.2	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAAACAAATGTCAACAT	NA	False	NA	NA	False	NA	NA	NA	73223123	73223558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73223100_73223600
transcript_145236.known	chrX	+	1642	3	FSM	ENSG00000131264.4	ENST00000373514.3	1642	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGTCTGGCATCAA	-5	True	NA	3	True	AATAAA	-22	NA	73447052	73455171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73447756_73453516_73453663_73454378
transcript_145240.known	chrX	+	4158	6	FSM	ENSG00000204116.12	ENST00000373502.10	6869	6	11	2700	8	1196	multi-exon	FALSE	canonical	3	11	junction_1	3.18747549010185	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTTGAACAAATGTATGA	6	True	NA	NA	False	AATAAA	-17	NA	73563207	73684411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73563581_73577406_73577462_73584416_73584573_73679325_73679383_73679653_73679714_73680954
transcript_145244.known	chrX	-	1877	6	FSM	ENSG00000230590.12	ENST00000687056.1	3054	6	3	1174	-1	3	multi-exon	FALSE	canonical	3	17	junction_1	19.1582880237249	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTATTTTCCCCCATCCC	3	True	NA	NA	False	AATAAA	-23	NA	74292589	74202667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74203910_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
transcript_145245.known	chrX	-	1925	6	FSM	ENSG00000230590.12	ENST00000664123.1	1925	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	23.6693895147298	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCACCCCTATTTTCCC	-4	True	NA	NA	False	AATAAA	-16	NA	74293552	74202674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74203910_74274341_74274411_74280376_74280495_74280930_74281086_74281701_74281849_74293351
transcript_145246.known	chrX	-	1950	6	FSM	ENSG00000230590.12	ENST00000654870.2	3111	6	0	1161	0	-3	multi-exon	FALSE	canonical	3	9	junction_1	21.2790977252326	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCCCTGTCAACCACT	-15	True	NA	NA	False	AATAAA	-34	NA	74292607	74202656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
transcript_145247.known	chrX	-	1477	6	FSM	ENSG00000230590.12	ENST00000671067.1	1477	6	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_5	23.0564524591274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGCCATTCTGTATAC	1170	False	NA	NA	False	NA	NA	NA	74292378	74247128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74247924_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292168
transcript_145248.known	chrX	-	1658	6	FSM	ENSG00000230590.12	ENST00000671343.1	1658	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	24.9527553588777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATATGGACTTTTGTAAC	9	True	NA	NA	False	TATAAA	-3	NA	74292583	74246911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74247924_74274341_74274411_74280376_74280495_74280930_74281086_74281701_74281849_74292426
transcript_14525.known	chr1	+	839	6	FSM	ENSG00000116906.13	ENST00000436239.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	162.810810451886	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAAGATCTTGGAAGAA	-6	True	NA	NA	False	TTTAAA	-44	NA	231241206	231266091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231241457_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013
transcript_145254.known	chrX	-	1435	4	FSM	ENSG00000230590.12	ENST00000455395.6	1435	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	28.5773803324704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAACTTATGTTCTCTA	4	True	NA	NA	False	TTTAAA	-28	NA	74292075	74279679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74291757
transcript_145255.known	chrX	-	2519	4	FSM	ENSG00000230590.12	ENST00000668224.1	2519	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	24.8506650928211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGAGGCTGAGGCAGGA	-12	True	NA	NA	False	AATACA	-42	NA	74292373	74278482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292168
transcript_145256.known	chrX	-	2778	4	FSM	ENSG00000230590.12	ENST00000429124.6	2778	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	18.8325958557674	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTAAAGGTTCCCAATG	928	False	NA	NA	False	ATTAAA	-19	NA	74292620	74278212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292426
transcript_145257.known	chrX	-	2838	4	FSM	ENSG00000230590.12	ENST00000662864.1	2838	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	14.7196014438797	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATCATCTCAAAATCAC	-26	True	NA	NA	False	NA	NA	NA	74293574	74278181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74293351
transcript_145259.nnic	chrX	+	729	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-211	92	-26	-92	intron_retention	FALSE	canonical	3	257	junction_2	134.5	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTGTTTGTTTGAA	242	False	NA	12	True	CATAAA	-20	NA	73944155	73947338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_145262.known	chrX	-	2359	7	FSM	ENSG00000230590.12	ENST00000602812.6	2359	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.643387711715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGTTTCTGGCTTCA	-26	True	NA	NA	False	AATAAA	-14	NA	74293574	74028132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74029552_74031595_74031841_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74293351
transcript_145269.known	chrX	+	882	3	FSM	ENSG00000225470.8	ENST00000666493.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	121.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	-5	True	NA	NA	False	AATAAA	-16	NA	73944317	73947704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944415_73944583_73944663_73946998
transcript_14527.known	chr1	+	3223	5	FSM	ENSG00000010072.16	ENST00000295050.12	3223	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	12.6984250992003	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTATATTATGTTC	20	True	NA	NA	False	AATAAA	-17	NA	231338292	231355023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303_231351572_231352609
transcript_145271.known	chrX	+	1744	3	FSM	ENSG00000225470.8	ENST00000665032.1	1744	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGAGTATAAAACTCGCTG	-4	True	NA	7	True	AGTAAA	-26	NA	73944340	74000495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73998767_73998845_73998953
transcript_145272.known	chrX	+	488	3	FSM	ENSG00000225470.8	ENST00000657096.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATATGTGAAATTGAACC	-6	True	NA	17	True	AATAAA	-30	NA	73944338	74004553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73998767_73998845_74004269
transcript_145273.known	chrX	+	3758	4	FSM	ENSG00000225470.8	ENST00000660836.1	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	181.267757750793	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTCAAAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	73944323	74007684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_74004269
transcript_145274.known	chrX	+	1195	3	FSM	ENSG00000225470.8	ENST00000656624.1	1195	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	175.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTGGAAGCATGAAGAG	-6	True	NA	NA	False	AGTAAA	-19	NA	73944316	73995806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994839
transcript_145275.known	chrX	+	1561	5	FSM	ENSG00000225470.8	ENST00000658649.1	1561	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	195.443566023546	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATAAAACTCGCTGA	2	True	NA	8	True	AGTAAA	-27	NA	73944324	74000496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73998767_73998845_73999354
transcript_145276.known	chrX	+	782	5	FSM	ENSG00000225470.8	ENST00000602294.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	204.296965224645	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATGATGTTGTTCTGG	-3	True	NA	-3	True	AATATA	-9	NA	73944341	74004673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994863_73994962_73998767_73998845_74004269
transcript_145277.known	chrX	+	1818	6	FSM	ENSG00000225470.8	ENST00000663027.1	1818	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	185.513773073591	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAATTTATACATTA	-6	True	NA	NA	False	AAAAAG	-40	NA	73944338	73999990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953
transcript_145278.known	chrX	+	853	4	FSM	ENSG00000225470.8	ENST00000660087.1	853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	214.757227274582	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGTATATCTATATGT	-4	True	NA	6	True	AATAAA	-19	NA	73944340	74004542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_74004269
transcript_145279.known	chrX	+	475	4	FSM	ENSG00000225470.8	ENST00000415215.1	475	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	214.757227274582	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGTTTTTTTAATTGAT	22	False	NA	28	True	NA	NA	NA	73944366	73947430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947097_73947231
transcript_145280.known	chrX	+	483	2	FSM	ENSG00000225470.8	ENST00000453317.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTCTTGAAGCATCT	1	True	NA	NA	False	NA	NA	NA	73944345	73944946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583
transcript_145281.known	chrX	+	962	5	FSM	ENSG00000225470.8	ENST00000667573.1	962	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	198.453237564924	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATGTGAAATTGAA	-5	True	NA	15	True	AATAAA	-28	NA	73944317	74004551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73998767_73998845_74004269
transcript_145282.known	chrX	+	864	6	FSM	ENSG00000225470.8	ENST00000667294.1	864	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	193.895848331005	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACTGTAAAACTACTA	-3	True	NA	-43	True	ATTAAA	-17	NA	73944341	74004633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73984443_73984542_73994839_73994962_73998767_73998845_74004269
transcript_145283.known	chrX	+	1525	6	FSM	ENSG00000225470.8	ENST00000659373.1	1525	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	193.941228211023	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAAGATAGTTTAAGAG	-3	True	NA	NA	False	AAAAAG	-7	NA	73944341	73999950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73997040_73997167_73998767_73998845_73998953
transcript_145285.known	chrX	-	3478	5	FSM	ENSG00000131263.13	ENST00000349225.2	3478	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	46.0814496299758	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTTGAGATTTGTCA	13	True	NA	NA	False	NA	NA	NA	74614617	74590117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74612581_74612644_74614421
transcript_145288.known	chrX	-	10565	4	FSM	ENSG00000131263.13	ENST00000332687.11	10565	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	26.6207938774685	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	6	True	NA	NA	False	TATAAA	-15	NA	74614624	74582975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74614421
transcript_145292.known	chrX	-	2361	17	FSM	ENSG00000131269.19	ENST00000645829.3	2361	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	83.0782528327961	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACATTCCCATTTTCTA	1	True	NA	-22	True	ATTAAA	-5	NA	75156282	75053292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114620_75114633_75114753_75114835_75156104
transcript_145293.known	chrX	-	4592	16	FSM	ENSG00000131269.19	ENST00000373394.8	4592	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_15	38.1216765400241	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	0	True	NA	-7	True	AATAAA	-20	NA	75156283	75051047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
transcript_145294.known	chrX	-	2106	16	FSM	ENSG00000131269.19	ENST00000663420.1	2106	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	62.4945864322129	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGGAGGAAAGAAAGAAAC	219	False	NA	-106	True	AATATA	-6	NA	75156064	75053442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75155979
transcript_145295.known	chrX	-	4595	16	FSM	ENSG00000131269.19	ENST00000253577.9	4595	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_15	40.7899769823694	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	0	True	NA	-7	True	AATAAA	-20	NA	75156283	75051047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
transcript_145298.known	chrX	-	2116	15	FSM	ENSG00000131269.19	ENST00000529949.5	2116	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	64.1970817570585	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGGAGGAAAGAAAGAA	1	True	NA	-108	True	AATATA	-4	NA	75156282	75053444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75156104
transcript_145299.known	chrX	-	2142	15	FSM	ENSG00000131269.19	ENST00000620875.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	70.8075863570725	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACATAAGACATTTTCTT	11	False	NA	-33	True	AAGAAA	-42	NA	75156272	75053369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75112885_75112973_75114753_75114835_75156104
transcript_145310.known	chrX	-	2234	15	FSM	ENSG00000131269.19	ENST00000339447.8	2234	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	69.416959640381	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTATAATCCTTCTT	4	True	NA	-11	True	ATTAAA	-16	NA	75156279	75053281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75112885_75112973_75114753_75114832_75156104
transcript_145311.known	chrX	-	2304	16	FSM	ENSG00000131269.19	ENST00000644766.1	2304	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.5408556183018	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAATCCTTCTTTT	-3	True	NA	-9	True	ATTAAA	-18	NA	75156286	75053279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060269_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
transcript_145317.known	chrX	+	1135	8	FSM	ENSG00000094841.14	ENST00000462237.5	1135	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	58.0197010875247	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAATAATTATCTTATG	17	True	NA	NA	False	NA	NA	NA	75274115	75303519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_145322.nic	chrX	+	1768	8	NIC	ENSG00000094841.14	novel	1636	7	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	69.2425491460626	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	447	False	NA	-16	True	NA	NA	NA	75274653	75304572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_75274759_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_145325.known	chrX	+	2474	7	FSM	ENSG00000094841.14	ENST00000373383.9	2474	7	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_2	21.3124898175277	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGGCAAATGTTGCT	-14	True	NA	NA	False	AATAAA	-32	NA	75274084	75304885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_145326.known	chrX	+	2234	7	FSM	ENSG00000094841.14	ENST00000373379.5	2234	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	57.5065213693195	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	-9	True	NA	12	True	ATTAAA	-15	NA	75274089	75304600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
transcript_145328.known	chrX	+	1636	7	FSM	ENSG00000094841.14	ENST00000530743.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	55.9483889153407	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	521	False	NA	-16	True	NA	NA	NA	75274727	75304572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_145336.known	chrX	-	5578	12	FSM	ENSG00000102383.14	ENST00000373367.8	5578	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.5344770449971	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGGTTTTTTTTCCTAA	-7	True	NA	0	True	ATTAAA	-16	NA	75523037	75368426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75505820_75505848_75522888
transcript_145339.known	chrX	-	6012	11	FSM	ENSG00000102383.14	ENST00000541184.1	6012	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	9.50578771065291	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTGTTGGTTTTTTTTC	59	False	NA	-4	True	ATTAAA	-12	NA	75523502	75368430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75522888
transcript_14534.known	chr1	+	3559	4	FSM	ENSG00000010072.16	ENST00000391858.8	3559	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	11.5758369027902	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTTTGACAATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	231337103	231353132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303
transcript_145343.nnic	chrX	-	1420	11	NNC	ENSG00000102383.14	novel	5578	12	NA	NA	-222	-34723	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	13.528118864055	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATAATCATGTGGTTT	0	True	NA	NA	False	ATTAAA	-18	NA	75523259	75403153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_75403372_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75505820_75505848_75522888
transcript_145351.nic	chrX	-	1291	4	ISM	ENSG00000102383.14	ENST00000373367.8	5578	12	-414	81890	51	51175	5prime_fragment	FALSE	canonical	3	39	junction_2	5.31245915016974	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCATGCCTCATTTC	110	False	NA	NA	False	AATAAA	-20	NA	75523451	75450316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_75450923_75478890_75478986_75505820_75505848_75522888
transcript_145352.nic	chrX	-	1160	3	ISM	ENSG00000102383.14	ENST00000541184.1	6012	11	155	81886	155	51175	5prime_fragment	FALSE	canonical	3	12	junction_2	16.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCATGCCTCATTTC	214	False	NA	NA	False	AATAAA	-20	NA	75523347	75450316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_75450923_75478890_75478986_75522888
transcript_145353.nnic	chrX	-	1789	3	NIC	ENSG00000102383.14	novel	899	2	NA	NA	166	537	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	18	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCTTTGTGTCAGATT	225	False	NA	NA	False	AATAAA	-20	NA	75523336	75500954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_75502269_75505820_75505848_75522888
transcript_145354.nnic	chrX	-	937	3	NIC	ENSG00000102383.14	novel	899	2	NA	NA	-120	-601	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	18	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGTCTGTGTTACTTT	NA	False	NA	-5	True	AATAAA	-16	NA	75523622	75502092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_75502269_75505820_75505848_75522888
transcript_145355.known	chrX	+	1185	6	FSM	ENSG00000102390.11	ENST00000373358.8	1185	6	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_5	25.8487910742456	3684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCCTGTAGTGAA	13	True	NA	137	True	NA	NA	NA	76173061	76178314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177615
transcript_145366.known	chrX	+	977	5	FSM	ENSG00000102390.11	ENST00000373357.3	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	226.934461904753	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATCTGTGACTG	-9	True	NA	19	True	AATAAA	-16	NA	76173039	76178196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76177615
transcript_14537.known	chr1	+	603	2	FSM	ENSG00000010072.16	ENST00000492437.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAAGGCTTCTAGGG	22	True	NA	NA	False	AGTAAA	-12	NA	231338294	231340061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231338605_231339768
transcript_14538.known	chr1	-	4335	5	FSM	ENSG00000135766.9	ENST00000366641.4	4335	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	9.36416040016402	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGTGGTTATTTCCA	1	True	NA	-10	True	ATTAAA	-24	NA	231422287	231363755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231366476_231367568_231367637_231370561_231370699_231373979_231374100_231420997
transcript_145382.known	chrX	+	3633	1	FSM	ENSG00000198934.5	ENST00000361470.4	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATGCTAATACACTGAC	-3	True	NA	NA	False	AATAAA	-17	NA	76427709	76431342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_76427700_76431300
transcript_14539.known	chr1	+	3048	11	FSM	ENSG00000270106.6	ENST00000602885.5	3048	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	98.3302598389733	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTATGCTTATTTAAG	-36	True	NA	NA	False	AATAAA	-13	NA	231528652	231819244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231528827_231529254_231529360_231561127_231561256_231693825_231694806_231701954_231702025_231749925_231750077_231767139_231767270_231770834_231771071_231795241_231795297_231800107_231800211_231818328
transcript_145391.known	chrX	-	3071	10	FSM	ENSG00000085224.23	ENST00000624032.3	3071	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	22.2316646605747	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAAAAGGGAACTGAAG	6	True	NA	95	True	GATAAA	-6	NA	77786208	77682304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_77683452_77683538_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_145397.nic	chrX	-	2945	9	ISM	ENSG00000085224.23	ENST00000373344.11	11165	35	-156	177802	-139	-377	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATGGATAATCAAGGGCA	NA	False	NA	4	True	AATACA	-43	NA	77786372	77682681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_145401.nic	chrX	-	1654	9	ISM	ENSG00000085224.23	ENST00000624032.3	3071	10	-164	1668	-139	-466	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCAAAGAGCATAAAGTCA	NA	False	NA	NA	False	NA	NA	NA	77786372	77683972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_145403.nic	chrX	-	1252	9	ISM	ENSG00000085224.23	ENST00000624032.3	3071	10	-164	2070	-139	103	5prime_fragment	FALSE	canonical	3	41	junction_3	14.0779082253011	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAGAAGATAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	77786372	77684374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_145407.known	chrX	-	1860	8	FSM	ENSG00000085224.23	ENST00000623321.3	1860	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	25.0867881319134	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATTATATGTTAAACT	-11	True	NA	NA	False	ATTAAA	-25	NA	77786225	77683506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77785981
transcript_145427.known	chrX	-	11165	35	FSM	ENSG00000085224.23	ENST00000373344.11	11165	35	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_29	139.750605844519	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTGTGTCAAAGCTCAA	-2	True	NA	NA	False	AATAAA	-18	NA	77786216	77504879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_77508630_77520787_77520917_77521402_77521499_77522262_77522389_77523251_77523402_77557450_77557646_77558668_77558847_77574249_77574359_77589833_77589941_77593695_77593850_77599410_77599581_77599731_77599821_77600433_77600565_77616612_77616731_77618805_77618982_77620394_77620533_77633206_77633385_77633565_77633713_77634593_77634704_77635914_77636057_77652113_77652354_77654097_77654201_77656559_77656654_77663381_77663559_77664644_77664779_77676225_77676299_77681519_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_145430.nnic	chrX	-	2923	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	64.5721302111058	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	26	False	NA	0	True	AATAAA	-16	NA	77895523	77826363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77827497_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_145431.nnic	chrX	-	3451	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.5721302111058	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	26	False	NA	0	True	AATAAA	-16	NA	77895523	77826363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77828025_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_145432.nnic	chrX	-	3400	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.5721302111058	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	26	False	NA	0	True	AATAAA	-16	NA	77895523	77826363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77828025_77828601_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_145435.nnic	chrX	-	2370	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	43	-10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.5721302111058	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAAGAAAAGGACTCC	26	False	NA	NA	False	NA	NA	NA	77895523	77827444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77828025_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_145437.nnic	chrX	-	2305	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	43	-24	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	64.5721302111058	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTAAGA	26	False	NA	NA	False	NA	NA	NA	77895523	77827458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77828025_77828601_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_14544.known	chr1	+	2634	6	FSM	ENSG00000116918.15	ENST00000366639.9	2634	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	48.6399013156894	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTTTTGTTTGTTC	-20	True	NA	138	True	AATAAA	-21	NA	231528668	231566524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127_231561256_231564527
transcript_145440.known	chrX	-	4047	10	FSM	ENSG00000102158.22	ENST00000358075.11	4047	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	12.9099444873581	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	0	True	AATAAA	-16	NA	77895593	77826363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_145451.known	chrX	-	962	4	FSM	ENSG00000102158.22	ENST00000373336.3	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	105.135890901041	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCCTCATCTTATGTT	-2	True	NA	NA	False	ATTAAA	-22	NA	77895440	77868107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_77868650_77870807_77870926_77875427_77875598_77895308
transcript_145455.known	chrX	+	605	4	FSM	ENSG00000131174.7	ENST00000373335.4	605	4	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	2165.92074339452	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	NA	False	NA	14	True	AATAAA	-19	NA	77899439	77905385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_77899594_77901743_77901868_77902642_77902768_77905183
transcript_145463.known	chrX	+	571	5	FSM	ENSG00000165240.22	ENST00000642651.1	571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCCGCCCGCCTCGGCC	20	True	NA	NA	False	NA	NA	NA	77910739	77975726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_77910836_77922998_77923053_77971620_77971762_77974744_77974809_77975510
transcript_14547.nic	chr1	+	642	5	ISM	ENSG00000116918.15	ENST00000366639.9	2634	6	-31	5295	-29	0	5prime_fragment	FALSE	canonical	3	227	junction_2	39.6382075780427	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAATGGGAAAGAAAAT	NA	False	NA	NA	False	AATAAA	-20	NA	231528637	231561229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127
transcript_145472.known	chrX	+	4812	11	FSM	ENSG00000102144.15	ENST00000373316.5	4812	11	0	0	0	0	multi-exon	FALSE	canonical	3	2846	junction_8	160.155049873552	9785	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGTTCTGTAGTTG	0	True	NA	4	True	ATTAAA	-16	NA	78104247	78129295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78104406_78109866_78109918_78113743_78113900_78114015_78114161_78117311_78117416_78118050_78118171_78122834_78122950_78123194_78123375_78124873_78125052_78125326_78125426_78125789
transcript_145473.known	chrX	-	2657	7	FSM	ENSG00000187325.5	ENST00000341864.6	2657	7	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	58.8607112880343	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTTTCATTTTTTAG	-14	True	NA	-21	True	AATAAA	-13	NA	78139650	78129747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
transcript_145474.known	chrX	-	2700	3	FSM	ENSG00000173198.6	ENST00000373304.4	2700	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGCTTTGGGAAAATTTT	0	True	NA	NA	False	AATAAA	-18	NA	78327611	78271467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_78273774_78283453_78283541_78327304
transcript_145478.known	chrX	+	553	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	14	3887	3	-179	multi-exon	FALSE	canonical	2	6	junction_2	9.22970747098737	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACCCCTGCAGCCAGC	4	True	NA	NA	False	NA	NA	NA	78747733	78754827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
transcript_145484.known	chrX	+	672	4	FSM	ENSG00000147145.14	ENST00000514744.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.0184900284226	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGTATTCATCTTGG	1	True	NA	NA	False	NA	NA	NA	78747730	78755006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78748035_78750173_78750224_78751209_78751312_78754790
transcript_145486.nnic	chrX	+	533	4	NNC	ENSG00000147145.14	novel	792	5	NA	NA	-4	-521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.39934634239519	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	-14	True	NA	NA	False	AAGAAA	-10	NA	78747715	78750773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_78748035_78748962_78749083_78750173_78750224_78750729
transcript_14549.nic	chr1	-	592	4	NIC	ENSG00000233461.6	novel	419	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	30.408332191468	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTTGGGAATAGCTT	1495	False	NA	-4	True	AATAAA	-17	NA	231528640	231522460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_231522638_231524425_231524542_231527337_231527416_231528419
transcript_145490.nic	chrX	+	459	3	ISM	ENSG00000147145.14	ENST00000614823.5	4454	5	-50	7941	-39	-521	5prime_fragment	TRUE	canonical	2	6	junction_2	6.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	NA	False	NA	NA	False	AAGAAA	-10	NA	78747669	78750773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_78748035_78750173_78750224_78750729
transcript_145491.nnic	chrX	+	1433	3	NNC	ENSG00000147145.14	novel	792	5	NA	NA	-4	-525	intron_retention	FALSE	canonical	1	1	junction_2	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAAAGACCC	-14	True	NA	NA	False	AAGAAA	-6	NA	78747715	78750769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_78748035_78748962_78749083_78749775
transcript_145497.nic	chrX	+	965	2	ISM	ENSG00000147145.14	ENST00000514744.5	672	4	-61	4233	-39	-521	5prime_fragment	FALSE	canonical	3	19	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	NA	False	NA	NA	False	AAGAAA	-10	NA	78747669	78750773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_78748035_78750173
transcript_14550.known	chr1	-	419	4	FSM	ENSG00000233461.6	ENST00000454631.2	419	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.8852107828483	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATCCAGTCAACCCAAA	1618	False	NA	-60	True	NA	NA	NA	231528517	231522516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522638_231524425_231524548_231527337_231527416_231528419
transcript_145501.known	chrX	+	2611	2	FSM	ENSG00000147145.14	ENST00000435339.3	2611	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATAAACTAAACCAAACC	-2	True	NA	NA	False	AATAAA	-13	NA	78747727	78757094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78748035_78754790
transcript_145507.known	chrX	-	879	6	FSM	ENSG00000078596.11	ENST00000469541.5	879	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	120.455136876764	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAAAAAAAACTACT	-2	True	NA	NA	False	TTTAAA	-3	NA	79366927	79360961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79366856
transcript_14551.known	chr1	-	444	3	FSM	ENSG00000233461.6	ENST00000668147.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTCAGTTTGGGAATAG	1677	False	NA	-7	True	AATAAA	-14	NA	231528458	231522463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522791_231527337_231527416_231528419
transcript_145513.known	chrX	-	1698	5	FSM	ENSG00000078596.11	ENST00000434584.2	1698	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	102.655978880921	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCACTGTTTCTTTTAT	NA	False	NA	-8	True	AATAAA	-12	NA	79367552	79360387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79367104
transcript_145515.known	chrX	-	1616	6	FSM	ENSG00000078596.11	ENST00000373298.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	13.5292276202302	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	10	True	NA	-4	True	AATAAA	-16	NA	79367334	79360383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104
transcript_145516.known	chrX	+	2249	8	FSM	ENSG00000122145.15	ENST00000373294.8	2249	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.91662969499982	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTTTTGGATAATTCC	16	False	NA	NA	False	AATAAA	-16	NA	80022241	80031769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_80022445_80023059_80023241_80024062_80024165_80025602_80025778_80026703_80026869_80027255_80027321_80027990_80028077_80030497
transcript_145518.known	chrX	+	506	2	FSM	ENSG00000122145.15	ENST00000476373.1	506	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTCTCTCCTACAT	16	False	NA	NA	False	NA	NA	NA	80014768	80022654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_80014888_80022267
transcript_14552.known	chr1	-	502	3	FSM	ENSG00000233461.6	ENST00000450783.6	502	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTTGGGAATAGCTT	1767	False	NA	-4	True	AATAAA	-17	NA	231528368	231522460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522638_231527337_231527416_231528121
transcript_145522.known	chrX	-	6813	6	FSM	ENSG00000278530.5	ENST00000614414.4	6813	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_5	6.22896460095897	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTTTTTCTTTAAAA	-17	True	NA	-5	True	AATAAA	-18	NA	80335364	80228488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_80234591_80288905_80289058_80289663_80289772_80290877_80291025_80310078_80310234_80335215
transcript_145524.known	chrX	-	1350	8	FSM	ENSG00000165288.11	ENST00000478415.1	1350	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	3.25137333621173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAATACCTTAAACACC	16	True	NA	NA	False	TATAAA	-14	NA	80809683	80743706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_80744254_80745568_80745730_80791853_80791953_80793621_80793773_80808538_80808599_80809012_80809043_80809245_80809305_80809440
transcript_145526.known	chrX	-	12921	41	FSM	ENSG00000165288.11	ENST00000373275.5	12921	41	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_31	15.3065345522754	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGTAGTTCTGAATTA	-7	True	NA	-19	True	AATGAA	-1	NA	80809877	80669502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_80677364_80681340_80681500_80681996_80682095_80682464_80682629_80684009_80684163_80685461_80685537_80686862_80687004_80688068_80688126_80689767_80689847_80689966_80690093_80691052_80691174_80691822_80691979_80692088_80692151_80692939_80693052_80695907_80695991_80696738_80696864_80699956_80700065_80703479_80703594_80704677_80704847_80707426_80707504_80709427_80709578_80716156_80716251_80717572_80717760_80719488_80719657_80722561_80722788_80723747_80723877_80724932_80725068_80728751_80728906_80729915_80730021_80733455_80733497_80734117_80734219_80735126_80735198_80735987_80736089_80744031_80744254_80745568_80745730_80791853_80791953_80793621_80793773_80808538_80808599_80809012_80809043_80809245_80809305_80809440
transcript_14553.known	chr1	-	2172	3	FSM	ENSG00000233461.6	ENST00000654602.1	2172	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	7.5	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAATCTTTTCTTTTT	-22	True	NA	NA	False	TATAAA	-28	NA	231528604	231520728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522638_231527337_231527416_231528419
transcript_145531.known	chrX	-	2099	7	FSM	ENSG00000198157.11	ENST00000358130.7	2099	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	127.802799482467	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGGCCTTTGGTA	2	True	NA	NA	False	TATAAA	-14	NA	81201913	81113698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534_81121673_81201736
transcript_145533.known	chrX	-	572	5	FSM	ENSG00000198157.11	ENST00000373250.7	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	133.346119178625	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAGAAGATGGAAAAAA	-4	True	NA	-7	True	GATAAA	-31	NA	81121638	81114984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81121534
transcript_145537.known	chrX	-	742	4	FSM	ENSG00000198157.11	ENST00000447319.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	159.858270560727	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGGAAAGATGTAAAAGT	34	False	NA	15	True	GATAAA	-4	NA	81121688	81114834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81121534
transcript_145540.known	chrX	-	578	6	FSM	ENSG00000198157.11	ENST00000430960.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	20.5951450589696	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGAAAAAGGGGAAGA	39	False	NA	-76	True	NA	NA	NA	81121683	81115053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
transcript_145541.known	chrX	-	547	6	FSM	ENSG00000198157.11	ENST00000491275.1	547	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	136.85320602748	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAGAAGATGAAGAAGA	34	False	NA	59	True	AGTAAA	-17	NA	81121688	81115110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118781_81119787_81119818_81121534
transcript_145543.known	chrX	+	928	5	FSM	ENSG00000131171.13	ENST00000481106.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	290.359583103434	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTCTCTCATTCCTA	7	True	NA	16	True	ATTAAA	-16	NA	81202127	81297597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_81202246_81202436_81202577_81276983_81277170_81278330_81278412_81297194
transcript_145547.known	chrX	+	1764	4	FSM	ENSG00000131171.13	ENST00000373212.6	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	20.4613456709637	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTCTTGGAGTTT	-19	True	NA	27	True	AATAAA	-23	NA	81202101	81298547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_81202246_81276983_81277170_81278330_81278412_81297194
transcript_14555.known	chr1	-	1721	3	FSM	ENSG00000233461.6	ENST00000662999.1	1721	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCAGGCGCGGTGGTT	-36	True	NA	NA	False	NA	NA	NA	231528618	231521276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522721_231527337_231527416_231528419
transcript_145551.known	chrX	-	6305	11	FSM	ENSG00000165259.14	ENST00000373177.3	6305	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	13.4762754498415	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACATCTATTTCTTTATT	6	True	NA	NA	False	AATAAA	-15	NA	84502453	84317877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84488023_84488133_84502341
transcript_145554.known	chrX	-	6200	10	FSM	ENSG00000165259.14	ENST00000297977.9	6200	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	7.56372107783	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATTTCTTTATTTTAA	6	True	NA	NA	False	AATAAA	-19	NA	84502453	84317873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84502341
transcript_14556.known	chr1	-	300	3	FSM	ENSG00000233461.6	ENST00000661659.1	300	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTAGTCTATGGTATT	-2	True	NA	NA	False	AATAAA	-15	NA	231528500	231523063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231523205_231527337_231527416_231528419
transcript_145562.known	chrX	-	475	3	FSM	ENSG00000165259.14	ENST00000465509.3	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTCTCTTTGGTGAC	6	True	NA	NA	False	AATAAA	-17	NA	84502453	84500024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_84500305_84501428_84501512_84502341
transcript_145564.known	chrX	-	1718	2	FSM	ENSG00000165259.14	ENST00000472135.2	1718	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGAGATTTTGATGTG	NA	False	NA	56	True	AATAAA	-19	NA	84469576	84439972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_84440586_84468471
transcript_145567.nnic	chrX	-	965	5	NNC	ENSG00000184788.14	novel	2821	8	NA	NA	-19	-48583	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	12.4398553046247	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTAGTTGGGTGTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	85243889	85140893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_85141104_85142609_85142763_85142840_85143019_85224204_85224327_85243587
transcript_14557.known	chr1	-	280	2	FSM	ENSG00000233461.6	ENST00000416221.6	280	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGAATAGCTTGTTAT	1618	False	NA	1	True	AATAAA	-22	NA	231528517	231522455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522638_231528419
transcript_145570.nnic	chrX	-	705	4	NNC	ENSG00000184788.14	novel	2821	8	NA	NA	-1	-48581	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.6363322667334	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTAGTTGGGTGTTCTCT	-6	True	NA	-1	True	AATAAA	-19	NA	85243780	85140891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_85141104_85142840_85143019_85224204_85224327_85243587
transcript_145577.nnic	chrX	-	1065	3	NNC	ENSG00000184788.14	novel	2821	8	NA	NA	1	17552	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	10	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGAATGATTTAAATAT	NA	False	NA	NA	False	AATAAA	-16	NA	85243910	85191223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_85191844_85224204_85224327_85243587
transcript_145578.known	chrX	-	3707	3	FSM	ENSG00000184788.14	ENST00000647304.1	3707	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	12	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCAAACAAATTTACAAG	NA	False	NA	NA	False	NA	NA	NA	85243870	85208775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_85212078_85224204_85224327_85243587
transcript_14558.known	chr1	-	1428	2	FSM	ENSG00000233461.6	ENST00000666601.1	1428	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGACTCTGAATGAAGC	-14	True	NA	NA	False	NA	NA	NA	231528596	231526164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231527416_231528419
transcript_145580.known	chrX	+	6480	9	FSM	ENSG00000155008.16	ENST00000373173.7	6480	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	5.1234753829798	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	-9	True	NA	12	True	AATAAA	-18	NA	85003876	85093315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_85003928_85046445_85046551_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
transcript_145584.known	chrX	+	4559	11	FSM	ENSG00000147180.17	ENST00000674551.1	4559	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	64.5941947855997	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGGTTTTATAAGTTT	0	True	NA	13	True	AATAAA	-15	NA	85243990	85273357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_85244192_85245902_85246023_85246929_85247189_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85267277_85267416_85268293_85268342_85270002_85270147_85270650
transcript_145585.known	chrX	+	4124	9	FSM	ENSG00000147180.17	ENST00000373165.7	4124	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	32.714436797842	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTTTTATAAGTTTATT	41	False	NA	16	True	AATAAA	-18	NA	85244031	85273360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_85244192_85245902_85246023_85247546_85247652_85255258_85255802_85264274_85264431_85265117_85265256_85268293_85268342_85270002_85270147_85270650
transcript_145591.known	chrX	-	5438	15	FSM	ENSG00000188419.14	ENST00000357749.7	5438	15	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	10.1672242514657	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTCATATTTTGT	-12	True	NA	-1	True	AATAAA	-20	NA	86047558	85861179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_85864822_85873051_85873213_85878964_85879064_85894187_85894285_85900645_85900710_85901083_85901189_85911260_85911339_85956152_85956379_85957854_85957976_85958860_85958978_85963664_85964053_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_145592.known	chrX	-	2821	5	FSM	ENSG00000188419.14	ENST00000615443.1	2821	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	25.2326673183792	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACTGATTTATTTTGAA	7	True	NA	NA	False	AATAAA	-27	NA	86047539	85969086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_85971587_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_145593.known	chrX	+	2417	12	FSM	ENSG00000126733.22	ENST00000373125.9	2417	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	4.79496981608749	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGTCACTGAGTATTT	-8	True	NA	2	True	AATAAA	-16	NA	86148450	86832602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_86149109_86376823_86376863_86514278_86514392_86651035_86651168_86695020_86695180_86714547_86714721_86739746_86739883_86812855_86813005_86813129_86813278_86814687_86814835_86816033_86816100_86832105
transcript_145596.known	chrX	+	5765	11	FSM	ENSG00000102271.14	ENST00000373119.9	5765	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	16.636105313444	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTGACAATGCTTG	4	True	NA	NA	False	AATAAA	-15	NA	87517801	87670050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931_87618129_87622210_87622424_87625609_87625797_87632209_87632435_87633748_87633912_87635562_87635776_87664763_87664936_87666474
transcript_145603.nic	chrX	+	1476	4	ISM	ENSG00000102271.14	ENST00000373114.4	2445	11	-242	51238	163	-51238	5prime_fragment	FALSE	canonical	3	95	junction_1	23.0988215187606	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACAACTGCGTATTTCA	88	False	NA	NA	False	AATAAA	-20	NA	87517571	87618358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_87518316_87613876_87614045_87614433_87614571_87617931
transcript_145605.known	chrX	+	1626	3	FSM	ENSG00000147183.10	ENST00000276127.9	1626	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTTGTATTGTATATTT	36	False	NA	NA	False	AATAAA	-19	NA	88747224	88754781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_88747370_88749317_88749424_88753406
transcript_145606.known	chrX	+	3206	2	FSM	ENSG00000174740.8	ENST00000312600.4	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTGACTGCATAGTAT	0	True	NA	NA	False	AATAAA	-19	NA	91434838	91438584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_91434895_91435434
transcript_145607.known	chrX	+	1262	2	FSM	ENSG00000174740.8	ENST00000373105.1	1262	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGCAATTGATTGAGTAT	57	False	NA	NA	False	AATAAA	-38	NA	91434594	91437000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_91434895_91436038
transcript_145608.known	chrX	+	9022	11	FSM	ENSG00000102290.23	ENST00000682573.1	9022	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	18.201373574541	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTGTTATTGTGTGT	0	True	NA	NA	False	AATAAA	-17	NA	91779374	92623230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_92201374_92201456_92263113_92263144_92387734_92387934_92468298_92468323_92618263
transcript_145612.known	chrX	+	4767	6	FSM	ENSG00000102290.23	ENST00000298274.12	4767	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	12.7216351150314	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAAACCCCGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91779260	91884007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_145613.nic	chrX	+	1139	4	ISM	ENSG00000102290.23	ENST00000298274.12	4767	6	114	47883	0	-43874	5prime_fragment	FALSE	canonical	3	7	junction_1	14.613540144522	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGTAAGCCATCACCC	0	True	NA	NA	False	AATAAA	-22	NA	91779374	91836124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460
transcript_145619.nnic	chrX	-	700	2	Antisense	novelGene_ENSG00000102290.23_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	92276545	92273120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_92273527_92276251
transcript_145632.nnic	chrX	+	865	4	NNC	ENSG00000179083.7	novel	3292	3	NA	NA	-289	-2304	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTACCCTGATGATA	NA	False	NA	NA	False	AAAAAG	-4	NA	93673723	93709961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_93673783_93674680_93674753_93698396_93698486_93709316
transcript_145635.known	chrX	+	3179	4	FSM	ENSG00000179083.7	ENST00000683942.1	3179	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGATTTGGGGTCTT	1	True	NA	5	True	AATAAA	-16	NA	93674205	93712265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_93674275_93674680_93674753_93698396_93698486_93709316
transcript_145640.nnic	chrX	-	815	4	Intergenic	novelGene_90	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	23.9304547943968	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGGATATGTCTTTATCA	NA	False	NA	0	True	ATTAAA	-18	NA	94704219	94620025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_94620436_94697895_94698010_94702006_94702107_94704028
transcript_145643.nnic	chrX	-	681	3	Intergenic	novelGene_89	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_2	3	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGGATATGTCTTTATCA	NA	False	NA	0	True	ATTAAA	-18	NA	94698924	94620025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_94620436_94697895_94698010_94698767
transcript_145683.nnic	chrX	+	833	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625702	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	321.600124378085	1112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310543	97469835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_97310659_97346805_97346950_97348080_97348281_97383908_97384045_97429649_97429746_97469693
transcript_145700.nnic	chrX	+	659	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625695	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	281.732475053906	546	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310536	97469835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_97310659_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_145712.nnic	chrX	+	600	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625591	0	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	318.814470604248	1010	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	23	True	AGTAAA	-20	NA	97310432	97469835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97469693
transcript_145730.known	chrX	+	1560	1	FSM	ENSG00000204086.4	ENST00000373040.4	1560	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGTCTTGCTTGTTT	110	False	NA	NA	False	NA	NA	NA	96883907	96885467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_96883900_96885500
transcript_14574.nnic	chr1	+	1319	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41627	-7035	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	23.1138486626524	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCACATTCTCAGTGAACT	-1	True	NA	4	True	AATAAA	-18	NA	232118463	232178608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232177207_232177267_232177744
transcript_14576.nnic	chr1	+	2041	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41625	962	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	12.8646803302686	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAAAACACACA	1	True	NA	NA	False	AAGAAA	-11	NA	232118465	232186605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232183937_232184078_232185098
transcript_145762.nnic	chrX	+	1215	4	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	13.1993265821489	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	NA	False	NA	32	True	AATAAA	-29	NA	98573765	98865564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_98573933_98644527_98644575_98731530_98731578_98864610
transcript_145764.nnic	chrX	+	1325	4	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	-147	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	17.9133717900592	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	NA	False	NA	32	True	AATAAA	-29	NA	98573662	98865564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_98573933_98644527_98644575_98731530_98731585_98864610
transcript_145767.nnic	chrX	+	1216	4	NIC	ENSG00000281566.3	novel	625	4	NA	NA	-44	-13	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	12.0277457017791	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTGCAACTTAGAC	NA	False	NA	19	True	AATAAA	-16	NA	98573765	98865551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_98573933_98644527_98644575_98841940_98842002_98864610
transcript_14577.nnic	chr1	+	2300	5	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41678	1168	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_3	12.8646803302686	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCAGGGGTATAATTGT	NA	False	NA	6	True	AATAAA	-24	NA	232118412	232186811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232183937_232184078_232185098
transcript_145771.known	chrX	+	822	2	FSM	ENSG00000281566.3	ENST00000650384.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAATGATGCT	NA	False	NA	NA	False	NA	NA	NA	98573809	98645226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_98573933_98644527
transcript_145774.known	chrX	+	1309	6	FSM	ENSG00000281566.3	ENST00000626665.3	1309	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.0466213843026	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	20	False	NA	32	True	AATAAA	-29	NA	98573858	98865564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98785026_98785125_98864610
transcript_145776.nic	chrX	+	1257	5	ISM	ENSG00000000005.6	ENST00000373031.5	1205	7	8644	0	-44	0	3prime_fragment	FALSE	canonical	3	8	junction_3	3.60555127546399	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGATTGCTGCTGAAC	220	False	NA	6	True	AATAAA	-19	NA	100593579	100599885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_100594036_100594260_100594363_100597503_100597658_100599015_100599183_100599507
transcript_145789.known	chrX	+	2074	15	FSM	ENSG00000101811.14	ENST00000415585.6	2074	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	107.938781780437	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	NA	False	NA	29	True	AATAAA	-27	NA	100820358	100840932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100830807_100830868_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_145790.known	chrX	+	2570	14	FSM	ENSG00000101811.14	ENST00000372972.7	2570	14	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	22.773128564503	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACATTTCATCCTAT	-8	True	NA	NA	False	AATAAA	-18	NA	100820390	100841520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_145791.known	chrX	+	1693	14	FSM	ENSG00000101811.14	ENST00000475126.5	1693	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	106.9632464666	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACTGCAAATTGATACA	18	True	NA	20	True	AATAAA	-18	NA	100820416	100840923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826684_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833270_100837338_100837450_100838238_100838365_100840713
transcript_145792.known	chrX	-	2856	3	FSM	ENSG00000182489.9	ENST00000372956.3	2856	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGTCCTGAGTATTT	-1	True	NA	0	True	AAGAAA	-19	NA	100928917	100913444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_100915084_100922792_100923062_100927969
transcript_145802.nnic	chrX	-	2363	14	NNC	ENSG00000188917.15	novel	3547	14	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	33.0488252752046	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATTTAACATTCTCTAG	NA	False	NA	-11	True	AATAAA	-19	NA	101052128	101009349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_101009623_101010373_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051783
transcript_145824.known	chrX	+	2039	2	FSM	ENSG00000126950.8	ENST00000372930.5	2039	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTGGACAAATACTGAA	0	True	NA	22	True	AATAAA	-23	NA	101078878	101096367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101079123_101094572
transcript_145828.known	chrX	+	5584	22	FSM	ENSG00000102384.14	ENST00000682095.1	5584	22	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_19	11.1361396112916	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTTTTGTGCCTATT	12	True	NA	10	True	AATAAA	-20	NA	101098203	101166126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_145829.known	chrX	+	2867	21	FSM	ENSG00000102384.14	ENST00000423383.3	2867	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	14.3041951888248	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGTAGTTGGT	-3	True	NA	NA	False	NA	NA	NA	101098188	101163436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101162832
transcript_145843.nic	chrX	+	819	7	NIC	ENSG00000102384.14	novel	3377	23	NA	NA	-30	19148	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	8.17856276425687	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGGTGAGTATTTTCA	NA	False	NA	NA	False	NA	NA	NA	101098157	101120443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_101098235_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401
transcript_145844.nic	chrX	+	823	7	ISM	ENSG00000102384.14	ENST00000423383.3	2867	21	-21	42993	-20	19148	5prime_fragment	FALSE	canonical	3	32	junction_1	5.13160143944688	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATGGTGAGTATTTTCA	-24	True	NA	NA	False	NA	NA	NA	101098167	101120443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401
transcript_145849.nic	chrX	+	672	5	NIC	ENSG00000102384.14	novel	3377	23	NA	NA	-20	1112	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	15.7797338380595	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTGAGGAAATG	-24	True	NA	5	True	ATTAAA	-20	NA	101098167	101102407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_101098249_101098443_101098540_101099808_101099931_101101057_101101297_101102273
transcript_145852.nic	chrX	+	546	4	NIC	ENSG00000102384.14	novel	3377	23	NA	NA	-30	1112	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	10.4986771653491	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTGAGGAAATG	NA	False	NA	5	True	ATTAAA	-20	NA	101098157	101102407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_101098235_101098443_101098540_101101057_101101297_101102273
transcript_145854.nic	chrX	+	550	4	ISM	ENSG00000102384.14	ENST00000423383.3	2867	21	-21	61029	-20	1112	5prime_fragment	FALSE	canonical	3	32	junction_1	5.8878405775519	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTGAGGAAATG	-24	True	NA	5	True	ATTAAA	-20	NA	101098167	101102407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273
transcript_145855.nic	chrX	+	1081	2	ISM	ENSG00000102384.14	ENST00000403304.6	622	4	-50	1852	-20	-1716	5prime_fragment	FALSE	canonical	3	32	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAACAATGTCTCACTA	-24	True	NA	NA	False	NA	NA	NA	101098167	101099443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_101098249_101098443
transcript_145856.known	chrX	-	1210	2	FSM	ENSG00000126953.8	ENST00000372902.4	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	-29	True	NA	-18	True	AATAAA	-18	NA	101348742	101345660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101346661_101348532
transcript_145857.known	chrX	-	2951	2	FSM	ENSG00000126953.8	ENST00000644112.2	2951	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	-29	True	NA	-18	True	AATAAA	-18	NA	101348742	101345660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101348402_101348532
transcript_145858.known	chrX	-	2575	19	FSM	ENSG00000010671.17	ENST00000308731.8	2575	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.74977952755818	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTATCTCTATTAA	-8	True	NA	NA	False	AATAAA	-20	NA	101386191	101349449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101349957_101353193_101353352_101353869_101353989_101354629_101354695_101356051_101356269_101356783_101356956_101357508_101357584_101358309_101358438_101358616_101358697_101359292_101359348_101360087_101360151_101360567_101360756_101362172_101362241_101362560_101362690_101369997_101370080_101371632_101371702_101374535_101374635_101375143_101375315_101386061
transcript_145859.known	chrX	-	1208	8	FSM	ENSG00000102393.14	ENST00000486121.6	1208	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	119.238057203706	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTGTGAAAAGGAAGCTAG	849	False	NA	NA	False	NA	NA	NA	101407833	101397935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401232_101401348_101401631_101401810_101403810_101403986_101407709
transcript_145860.known	chrX	-	1356	7	FSM	ENSG00000102393.14	ENST00000676372.1	1356	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.327904307672	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTTTATTGCCAA	12	True	NA	-40	True	ATTAAA	-14	NA	101407903	101397808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398369_101398568_101398718_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_145861.known	chrX	-	1318	7	FSM	ENSG00000102393.14	ENST00000218516.4	1318	7	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	32.3698247686878	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	-10	True	NA	-34	True	ATTAAA	-20	NA	101407925	101397802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_145862.known	chrX	-	1254	7	FSM	ENSG00000102393.14	ENST00000676156.1	1254	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	100.73011245678	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTTTATTGCCAA	12	True	NA	-40	True	ATTAAA	-14	NA	101407903	101397808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401667_101401810_101403810_101403986_101407709
transcript_145865.known	chrX	+	433	6	FSM	ENSG00000241343.10	ENST00000372849.8	433	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3662.7013200642	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCACTTCATTTGTT	23	True	NA	16	True	AATAAA	-10	NA	101391015	101395786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101392049_101392096_101395334_101395458_101395727
transcript_145866.known	chrX	+	910	5	FSM	ENSG00000241343.10	ENST00000427805.6	910	5	0	0	0	0	multi-exon	FALSE	canonical	3	5316	junction_4	1300.52393288244	36330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGTTAATTTAATAAAGAA	NA	False	NA	-32	True	NA	NA	NA	101390823	101396117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_145871.known	chrX	-	1431	6	FSM	ENSG00000102393.14	ENST00000466414.2	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	30.8090895678532	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATTGCCAACTACT	860	False	NA	-35	True	ATTAAA	-19	NA	101407822	101397803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398369_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_145873.known	chrX	+	761	5	FSM	ENSG00000241343.10	ENST00000553110.8	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	5316	junction_4	1300.52393288244	33330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGTACACTGTAACAT	18	True	NA	6	True	AATAAA	-22	NA	101391010	101396155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_145877.known	chrX	+	399	5	FSM	ENSG00000241343.10	ENST00000471855.1	399	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	3395.84152861997	6802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	209	False	NA	25	True	AATAAA	-19	NA	101391201	101395795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391236_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_145882.known	chrX	-	1420	5	FSM	ENSG00000102393.14	ENST00000675799.1	1420	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	121.516459790433	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCTTCAGCTAGAAAA	-3	True	NA	-94	True	CATAAA	-14	NA	101407962	101397862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398369_101398947_101401631_101401810_101403810_101403986_101407709
transcript_145884.known	chrX	+	691	4	FSM	ENSG00000241343.10	ENST00000392994.7	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	668.596706210519	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCATTTGTTTGCTGTT	-4	True	NA	23	True	AATAAA	-17	NA	101390988	101395793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334
transcript_145889.known	chrX	+	2240	3	FSM	ENSG00000241343.10	ENST00000465340.5	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	818	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATAAGGAAATAAAA	18	True	NA	NA	False	AAAAAG	-9	NA	101391010	101393852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458_101391565_101391754
transcript_145892.nic	chrX	-	1592	3	ISM	ENSG00000102393.14	ENST00000674634.2	1089	6	-233	2540	-124	-2540	5prime_fragment	FALSE	canonical	3	259	junction_1	31.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAGCCCCAGCTGGAAA	546	False	NA	-17	True	AATAAA	-20	NA	101408136	101400819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_101401810_101403810_101403986_101407709
transcript_145893.known	chrX	+	547	2	FSM	ENSG00000241343.10	ENST00000491851.5	547	2	0	0	0	0	multi-exon	FALSE	canonical	3	7209	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGCAACTCATGTCTGA	18	True	NA	NA	False	NA	NA	NA	101391010	101391969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458
transcript_145894.known	chrX	+	710	4	FSM	ENSG00000241343.10	ENST00000465744.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	5316	junction_3	1499.43863569745	3483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	121	False	NA	25	True	AATAAA	-19	NA	101391113	101395795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391565_101391754_101391823_101395334_101395458_101395727
transcript_145895.known	chrX	+	2296	2	FSM	ENSG00000126945.9	ENST00000316594.6	2296	2	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	0	2927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	-4	True	NA	28	True	AATAAA	-26	NA	101408221	101414133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101408320_101411935
transcript_145896.known	chrX	-	1092	6	FSM	ENSG00000102393.14	ENST00000675592.1	1092	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.368577255885	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTTTATTGCCAA	12	True	NA	-40	True	ATTAAA	-14	NA	101407903	101397808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_14590.known	chr1	-	803	4	FSM	ENSG00000135749.19	ENST00000484347.5	803	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.6931365951495	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGATAGGTTTAATGCA	NA	False	NA	-6	True	AATAAA	-18	NA	233160307	233095405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282
transcript_145913.nic	chrX	+	1186	5	NIC	ENSG00000196440.12	novel	5399	16	NA	NA	-39	437	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	2.87228132326901	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTTCAATATACTGAT	182	False	NA	NA	False	AATAAA	-15	NA	101418247	101448314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997_101446045_101447493
transcript_145915.known	chrX	+	403	4	FSM	ENSG00000196440.12	ENST00000430461.5	403	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTAGAAAAACAATTTTA	15	False	NA	NA	False	NA	NA	NA	101418297	101446132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997
transcript_145917.known	chrX	+	2872	11	FSM	ENSG00000196440.12	ENST00000445416.5	2872	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	6.62193325245732	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTCATAAATTCTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	101485253	101516954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101485531_101486022_101486093_101487192_101487273_101487607_101487692_101488043_101488100_101498144_101499367_101504936_101505356_101509358_101509428_101509589_101509679_101511024_101511056_101516479
transcript_145918.known	chrX	+	346	2	FSM	ENSG00000196440.12	ENST00000453574.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGGTGGTTCTCAAAT	16	False	NA	8	True	TTTAAA	-35	NA	101418298	101419183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101418371_101418909
transcript_145919.known	chrX	+	5399	16	FSM	ENSG00000196440.12	ENST00000433011.6	5399	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.26935440177903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTAGATTTTTTTACTG	4	True	NA	11	True	ATTAAA	-16	NA	101418286	101533459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997_101446045_101486022_101486093_101487192_101487273_101487607_101487692_101488007_101488100_101488443_101489316_101498144_101499367_101504936_101505356_101509358_101509428_101509589_101509679_101511024_101511056_101524203_101524433_101531643
transcript_145922.known	chrX	+	2125	4	FSM	ENSG00000126947.13	ENST00000372829.8	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	22.7596133534821	1212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	-8	True	NA	29	True	AATAAA	-30	NA	101550546	101554700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808
transcript_145923.known	chrX	+	655	1	FSM	ENSG00000204072.3	ENST00000602449.1	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	NA	False	NA	NA	False	AATAAA	-28	NA	101598016	101598671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101598000_101598700
transcript_145932.known	chrX	-	1840	3	FSM	ENSG00000198960.11	ENST00000361910.9	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	1.5	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTCATGGTCCTTG	-34	True	NA	NA	False	AATAAA	-21	NA	101618000	101615124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101616767_101617502_101617585_101617884
transcript_145933.known	chrX	-	846	4	FSM	ENSG00000198960.11	ENST00000497931.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	22.4251842554055	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	56	False	NA	NA	False	AATAAA	-28	NA	101617910	101615117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101615761_101616671_101616767_101617502_101617585_101617884
transcript_145934.known	chrX	-	1928	4	FSM	ENSG00000198960.11	ENST00000539247.5	1928	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	74.7454941042528	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGAGTCATGGTCCTT	-35	True	NA	NA	False	AATAAA	-20	NA	101618001	101615125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101616767_101617282_101617371_101617502_101617585_101617884
transcript_145936.known	chrX	+	3730	5	FSM	ENSG00000102401.20	ENST00000341189.8	3730	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	36.6776498701866	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	NA	False	NA	27	True	AATAAA	-37	NA	101622796	101627843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623277_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_145939.known	chrX	+	3348	5	FSM	ENSG00000102401.20	ENST00000471229.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	40.8839821935193	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	-9	True	NA	27	True	AATAAA	-37	NA	101623150	101627843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623277_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_145942.known	chrX	+	3318	5	FSM	ENSG00000102401.20	ENST00000537169.1	3318	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	75.4730912312461	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	201	False	NA	25	True	AATAAA	-35	NA	101623360	101627841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623431_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_145944.known	chrX	+	506	5	FSM	ENSG00000102401.20	ENST00000467808.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	76.3327419918871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGCTATTGTCGGGGA	96	False	NA	NA	False	NA	NA	NA	101623255	101624952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623431_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_145946.known	chrX	+	833	3	FSM	ENSG00000102401.20	ENST00000477980.6	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTGTCTTGAGGAGGT	15	True	NA	NA	False	NA	NA	NA	101623174	101624532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623894_101624157_101624219_101624479
transcript_145947.known	chrX	-	758	6	FSM	ENSG00000184867.14	ENST00000458024.5	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	95.4031446022614	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGAGGCAGTGGCCC	18	False	NA	NA	False	NA	NA	NA	101659831	101657310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659137_101659418_101659502_101659757
transcript_145949.known	chrX	-	612	6	FSM	ENSG00000184867.14	ENST00000479333.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	95.8507172638786	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAATACACCAGGGGGA	13	False	NA	NA	False	GGGGCT	-18	NA	101659836	101657517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659418_101659502_101659757
transcript_145950.nic	chrX	-	2849	6	NIC	ENSG00000184867.14	novel	2819	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_2	114.794424951737	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	-3	True	AATAAA	-25	NA	101659867	101655280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_101657716_101658072_101658143_101658491_101658570_101659075_101659149_101659418_101659502_101659757
transcript_145959.known	chrX	-	914	5	FSM	ENSG00000184867.14	ENST00000413506.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	114.2702389076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCGGAGACTTCCAGG	15	False	NA	NA	False	GGGGCT	-23	NA	101659834	101657086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659757
transcript_145964.known	chrX	-	580	5	FSM	ENSG00000184867.14	ENST00000431597.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	123.780046857319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACCTTGGGTCAGGATTCA	53	False	NA	NA	False	NA	NA	NA	101659796	101657400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101657716_101658072_101658143_101659075_101659149_101659418_101659502_101659757
transcript_145966.known	chrX	-	2762	5	FSM	ENSG00000184867.14	ENST00000328766.9	2762	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	137.124031445987	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	5	True	NA	-3	True	AATAAA	-25	NA	101659844	101655280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659137_101659757
transcript_145967.known	chrX	+	1080	3	FSM	ENSG00000184905.9	ENST00000329035.2	1080	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	87	2000	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACAGAATCTGTCTGTT	21	False	NA	16	True	AATAAA	-16	NA	102125702	102127711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102125807_102126372_102126446_102126808
transcript_145970.known	chrX	-	860	3	FSM	ENSG00000184515.11	ENST00000543160.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATAGACTATTTCATTT	170	False	NA	-18	True	AATAAA	-19	NA	102155790	102153707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_102154303_102154743_102154811_102155592
transcript_145971.known	chrX	-	777	3	FSM	ENSG00000184515.11	ENST00000333643.4	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	3.5	2122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAGATAGACTATTTC	-17	True	NA	-22	True	AATAAA	-15	NA	102155977	102153711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_102154303_102154743_102154811_102155858
transcript_145976.known	chrX	-	634	3	FSM	ENSG00000158164.7	ENST00000289373.5	634	3	0	0	0	0	multi-exon	TRUE	canonical	3	1351	junction_1	27	11800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGACTCCTGTGGTTG	11	True	NA	-12	True	AATAAA	-20	NA	102516739	102513681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_102514125_102515063_102515181_102516665
transcript_145978.nic	chrX	+	960	8	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_7	30.6773864730411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	-18	True	NA	14	True	ATTAAA	-17	NA	102599509	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599573_102599705_102599848_102600919_102601033_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
transcript_145982.nic	chrX	+	847	7	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_6	37.2681723011294	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	-18	True	NA	14	True	ATTAAA	-17	NA	102599509	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
transcript_145985.known	chrX	+	964	6	FSM	ENSG00000271147.8	ENST00000466616.5	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	37.992630864419	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	-2	True	NA	14	True	ATTAAA	-17	NA	102599525	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
transcript_145986.known	chrX	+	645	6	FSM	ENSG00000271147.8	ENST00000460026.6	645	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	36.4581952378337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAGAGAAGCTGGCTTT	-3	True	NA	NA	False	AATAGA	-25	NA	102599524	102639538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399
transcript_145987.nnic	chrX	+	713	6	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_5	41.3182768275735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	-18	True	NA	14	True	ATTAAA	-17	NA	102599509	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102649953
transcript_145992.nic	chrX	+	749	6	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	28.6886737232658	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	-18	True	NA	14	True	ATTAAA	-17	NA	102599509	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599573_102599705_102599848_102601463_102601510_102605481_102605654_102639399_102639534_102649953
transcript_145995.nnic	chrX	+	876	5	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-32	0	intron_retention	FALSE	canonical	3	9	junction_4	42.8215775048048	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	274	False	NA	14	True	ATTAAA	-17	NA	102599479	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102649953
transcript_145997.nic	chrX	+	912	5	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-32	0	intron_retention	FALSE	canonical	3	12	junction_4	30.7367857786074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	274	False	NA	14	True	ATTAAA	-17	NA	102599479	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599848_102601463_102601510_102605481_102605654_102639399_102639534_102649953
transcript_146001.known	chrX	+	668	4	FSM	ENSG00000271147.8	ENST00000475738.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	30.3900568534439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGGTAAGCAAATAGAG	-2	True	NA	NA	False	AATAGA	-14	NA	102599525	102639527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102601463_102601510_102605481_102605654_102639399
transcript_146008.nic	chrX	+	853	4	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-19	0	intron_retention	FALSE	canonical	3	12	junction_3	14.6363322667334	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	287	False	NA	14	True	ATTAAA	-17	NA	102599492	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599848_102605481_102605654_102639399_102639534_102649953
transcript_146009.nic	chrX	+	2531	4	ISM	ENSG00000271147.8	ENST00000460026.6	645	6	-15	35379	-2	-1733	5prime_fragment	FALSE	canonical	3	19	junction_1	39.0924829375447	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-18	True	NA	26	True	AATAAA	-25	NA	102599509	102604159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879
transcript_14601.known	chr1	+	767	4	FSM	ENSG00000135778.12	ENST00000494689.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	198.570446497514	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCACATGATTTGGGT	-20	True	NA	49	True	NA	NA	NA	232950604	232978482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232956346_232956444_232969908_232970119_232978162
transcript_146010.nnic	chrX	+	569	4	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	4.08248290463863	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	-18	True	NA	14	True	ATTAAA	-17	NA	102599509	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599573_102599705_102599848_102605481_102605654_102649953
transcript_146015.nnic	chrX	+	719	3	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-19	0	intron_retention	FALSE	canonical	3	9	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	287	False	NA	14	True	ATTAAA	-17	NA	102599492	102650145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599848_102605481_102605654_102649953
transcript_146017.known	chrX	+	5971	5	FSM	ENSG00000198932.13	ENST00000361600.9	5971	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.76313972081441	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGAAGTGTATATTA	NA	False	NA	NA	False	AATAAA	-20	NA	102651365	102659083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102651596_102652174_102652266_102652830_102652899_102653220_102653299_102653579
transcript_146019.known	chrX	+	2636	3	FSM	ENSG00000125962.16	ENST00000479502.2	2636	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	11.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	10	True	NA	26	True	AATAAA	-25	NA	102599537	102604159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102601463_102601510_102601879
transcript_146021.known	chrX	+	2777	4	FSM	ENSG00000125962.16	ENST00000473968.7	2772	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	37	junction_1	33.1595469745224	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	-18	True	NA	26	True	AATAAA	-25	NA	102599509	102604159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879
transcript_146023.known	chrX	+	3534	5	FSM	ENSG00000158301.20	ENST00000483720.7	3536	5	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.3204141630923	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	-3	True	NA	16	True	AATAAA	-19	NA	102712447	102717731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714536
transcript_146025.known	chrX	+	3451	4	FSM	ENSG00000158301.20	ENST00000332262.10	3451	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.7055862420559	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGACCCTTCTTCAGTT	-6	True	NA	18	True	AATAAA	-21	NA	102712444	102717733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102712553_102713781_102713850_102714188_102714267_102714536
transcript_146028.known	chrX	+	4031	3	FSM	ENSG00000198908.12	ENST00000447531.5	4031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	1	True	NA	19	True	AATAAA	-15	NA	102745978	102752438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102746175_102747816_102747912_102748698
transcript_146032.known	chrX	+	3666	5	FSM	ENSG00000158301.20	ENST00000543253.6	3666	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	37.8310388437854	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGACCCTTCTTCAGT	-6	True	NA	17	True	AATAAA	-20	NA	102712444	102717732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714408
transcript_146053.known	chrX	-	795	3	FSM	ENSG00000133169.6	ENST00000372728.4	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	19.5	14326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATATTCTTTTTTTGT	0	True	NA	-5	True	AATAAA	-18	NA	103064171	103062650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103063280_103063641_103063732_103064095
transcript_146054.known	chrX	-	1956	20	FSM	ENSG00000147206.17	ENST00000395065.8	1956	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.493727974718256	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTGAGTCAGGCATTA	-13	True	NA	NA	False	AATAAA	-35	NA	103093143	103075809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103076001_103076240_103076302_103077613_103077747_103078559_103078633_103079220_103079264_103079358_103079475_103079583_103079643_103079762_103079871_103080012_103080069_103080147_103080217_103080575_103080613_103082254_103082365_103082759_103082849_103083003_103083074_103083192_103083274_103083397_103083503_103083608_103083693_103084341_103084496_103084714_103084884_103092995
transcript_146059.known	chrX	+	1066	2	FSM	ENSG00000102409.10	ENST00000372691.3	1066	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGGTGTGTGTGTACG	6	True	NA	-81	True	NA	NA	NA	103215123	103217099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103215239_103216148
transcript_146060.known	chrX	+	1312	3	FSM	ENSG00000102409.10	ENST00000372695.6	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	17.5	5513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGATGATTATAGGA	-10	True	NA	66	True	ATTAAA	-25	NA	103215107	103217246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103215239_103215681_103215765_103216148
transcript_146064.known	chrX	-	1174	3	FSM	ENSG00000180964.17	ENST00000372685.8	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_1	28	6593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	-3	True	NA	NA	False	AATAAA	-20	NA	103255155	103252994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103254018_103254604_103254678_103255077
transcript_146065.known	chrX	-	1131	2	FSM	ENSG00000180964.17	ENST00000360000.8	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	0	2708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	17	False	103255193	NA	False	AATAAA	-20	NA	103255185	103252994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103254018_103255077
transcript_146067.nnic	chrX	-	1217	3	NNC	ENSG00000204065.3	novel	1046	3	NA	NA	483	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	33	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	735	False	NA	-1	True	AATAAA	-21	NA	103276267	103273690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_103274591_103275274_103275343_103276018
transcript_146068.known	chrX	-	1046	3	FSM	ENSG00000204065.3	ENST00000372680.2	1046	3	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_2	9.5	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	-1	True	NA	-1	True	AATAAA	-21	NA	103276750	103273690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103274591_103275274_103275343_103276672
transcript_146072.known	chrX	-	1077	3	FSM	ENSG00000133134.12	ENST00000536889.1	1077	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	233.5	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCATTCTCTGCATTC	10	True	NA	-29	True	AATAAA	-9	NA	103310955	103309353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103309982_103310357_103310434_103310582
transcript_146073.known	chrX	-	736	3	FSM	ENSG00000133134.12	ENST00000449185.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	269	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGAGTCATAGTTTGC	30	True	NA	NA	False	NA	NA	NA	103310935	103309671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103309982_103310357_103310434_103310585
transcript_146074.known	chrX	-	668	3	FSM	ENSG00000133134.12	ENST00000372674.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	249	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTATTTCTTGTGGG	2	True	NA	NA	False	NA	NA	NA	103311007	103309501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103309982_103310357_103310434_103310895
transcript_146077.known	chrX	-	843	3	FSM	ENSG00000133134.12	ENST00000372677.8	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	36	8861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCATTCTTTTTTAC	19	False	103311009	-21	True	AATAAA	-17	NA	103310990	103309345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103309982_103310357_103310434_103310859
transcript_146078.known	chrX	+	1134	3	FSM	ENSG00000182916.8	ENST00000332431.5	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	10.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	11	True	NA	NA	False	AATAAA	-20	NA	103330238	103332326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103330305_103330922_103331041_103331376
transcript_146080.known	chrX	+	852	3	FSM	ENSG00000182916.8	ENST00000372666.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	43.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCCTATCTGCATC	1	True	NA	27	True	NA	NA	NA	103330228	103332088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103330305_103330976_103331041_103331376
transcript_146085.known	chrX	+	699	2	FSM	ENSG00000185222.10	ENST00000372656.5	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACACATTTGTAAAAAA	-10	True	NA	8	True	AATAAA	-5	NA	103356488	103358195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103356607_103357614
transcript_146086.known	chrX	+	1938	1	FSM	ENSG00000185222.10	ENST00000646896.1	1938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	19	True	NA	-1	True	AATAAA	-11	NA	103356517	103358455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103356500_103358500
transcript_146087.known	chrX	+	1028	3	FSM	ENSG00000185222.10	ENST00000372661.6	1028	3	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_2	29.5	11063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCAGCACGTATTA	7	True	NA	6	True	AATAAA	-18	NA	103356505	103358462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103356607_103357082_103357162_103357614
transcript_146105.known	chrX	+	805	2	FSM	ENSG00000166681.14	ENST00000372635.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAGCAATCTATAC	46	False	NA	31	True	AATAAA	-4	NA	103376406	103378060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103376614_103377462
transcript_146106.known	chrX	+	810	3	FSM	ENSG00000166681.14	ENST00000361298.9	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	4923	junction_2	646.5	22525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAACATTTCTGTGTG	1	True	NA	135	True	ATTAAA	-17	NA	103376537	103378164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103376614_103377027_103377107_103377509
transcript_146107.known	chrX	+	913	3	FSM	ENSG00000166681.14	ENST00000372645.3	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_2	2535	9171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTATTGTCTCATTAA	34	True	NA	48	True	AATAAA	-21	NA	103376394	103378077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103376614_103377027_103377107_103377462
transcript_146108.known	chrX	+	753	2	FSM	ENSG00000166681.14	ENST00000372634.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	4923	junction_1	0	3352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATACATTTATTGTCT	0	True	NA	42	True	AATAAA	-15	NA	103376915	103378071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103377107_103377509
transcript_146113.nnic	chrX	+	1211	6	Fusion	ENSG00000281091.3_ENSG00000234405.2	novel	2720	3	NA	NA	3	24	multi-exon	FALSE	canonical	0	0	junction_5	7.4565407529229	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAGAGCTGCTGTTGTC	-15	True	NA	NA	False	AATAAA	-17	NA	103404779	103517943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chrX_+_103405097_103408157_103408300_103450496_103450661_103461214_103461355_103475100_103475253_103517647
transcript_146121.nnic	chrX	+	951	3	NNC	ENSG00000281091.3	novel	2720	3	NA	NA	3	-16322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTTTCTGAGATATCTG	-15	True	NA	NA	False	CATAAA	-36	NA	103404779	103436432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_103405097_103408157_103408300_103435940
transcript_146131.known	chrX	+	681	4	FSM	ENSG00000133142.19	ENST00000490644.5	681	4	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_2	461.454945435269	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGGGAGAGTCAGAGA	0	True	NA	78	True	GATAAA	-45	NA	103585522	103586905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103585625_103585858_103586108_103586218_103586292_103586648
transcript_146133.known	chrX	+	338	3	FSM	ENSG00000133142.19	ENST00000425011.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	73.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGGATAAAGGAAAGCC	14	False	NA	22	True	AAAACA	-27	NA	103585614	103586849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103585684_103586218_103586292_103586653
transcript_146137.known	chrX	+	1571	3	FSM	ENSG00000133142.19	ENST00000472745.1	1571	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	468.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCATAAAAATAATAAAATA	10	True	NA	-19	True	AAAACA	-11	NA	103585532	103587694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103585625_103585858_103586292_103586648
transcript_146140.known	chrX	+	1008	3	FSM	ENSG00000133142.19	ENST00000494801.5	1008	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	452	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTACATTTTTGTAAAA	40	True	NA	23	True	ATTAAA	-31	NA	103585562	103587526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103585625_103586218_103586292_103586653
transcript_146141.known	chrX	+	1166	4	NNC	ENSG00000133142.19	novel	1008	3	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	482.096348138926	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGTGAATATTTGAAT	-6	True	NA	12	True	AATAAA	-15	NA	103585516	103587725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_103585625_103586218_103586292_103586653_103586862_103586948
transcript_146146.known	chrX	+	1056	3	FSM	ENSG00000196507.11	ENST00000372627.10	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8	807	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTATCAGCCCGTTT	16	True	NA	16	True	AATAAA	-32	NA	103607962	103609927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103608059_103608603_103608674_103609037
transcript_146152.known	chrX	+	721	3	FSM	ENSG00000172465.14	ENST00000372626.7	721	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTTTCTGTTTGCAT	-19	True	NA	NA	False	NA	NA	NA	103628703	103630447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103628794_103629493_103629562_103629884
transcript_146153.known	chrX	+	1164	3	FSM	ENSG00000172465.14	ENST00000372624.3	1164	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	28	False	NA	NA	False	AATAAA	-24	NA	103628998	103630953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103629026_103629493_103629562_103629884
transcript_14616.known	chr1	+	882	3	FSM	ENSG00000135778.12	ENST00000496662.5	882	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	315	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTAGGTCATCTCCCC	8	True	NA	-55	True	AAGAAA	-2	NA	232950632	232978722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232969908_232970119_232978162
transcript_146168.known	chrX	+	2086	3	FSM	ENSG00000231154.1	ENST00000435306.1	2086	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATTTCTTTAATAAGGA	16	False	NA	NA	False	AATAAA	-24	NA	103687283	103691772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103687487_103687951_103689481_103691418
transcript_146172.known	chrX	-	562	5	FSM	ENSG00000123562.18	ENST00000422355.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	857.88967093677	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGATCCGTGAGGAAG	2	True	NA	NA	False	NA	NA	NA	103686705	103676825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103678498_103678621_103684680_103684730_103685170_103685261_103686630
transcript_146173.known	chrX	-	1824	4	FSM	ENSG00000123562.18	ENST00000360458.5	1824	4	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	743.615641458827	2268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGTGCCTTTCA	-6	True	NA	-3	True	AATAAA	-27	NA	103688064	103675495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103687988
transcript_146174.known	chrX	-	869	5	FSM	ENSG00000123562.18	ENST00000442614.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	800.464357420116	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAGTATGCAAATTG	-2	True	NA	NA	False	AAGAAA	-16	NA	103686709	103676553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
transcript_146179.known	chrX	-	2063	7	FSM	ENSG00000188828.13	ENST00000480725.2	2063	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	0.74535599249993	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTGAGCATGTACT	NA	False	NA	NA	False	NA	NA	NA	103728624	103718347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103719272_103722151_103722293_103723855_103723939_103724077_103724302_103724540_103724609_103724897_103725029_103728132
transcript_146187.nnic	chrX	+	636	3	NNC	ENSG00000179363.7	novel	732	3	NA	NA	800	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCATTTGTCTTCCCTC	745	False	NA	NA	False	AATAAA	-17	NA	103711708	103714032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_103711781_103712235_103712361_103713593
transcript_146188.known	chrX	+	732	3	FSM	ENSG00000179363.7	ENST00000319560.7	732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCATTTGTCTTCCCTC	-2	True	NA	NA	False	AATAAA	-17	NA	103710908	103714032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103711077_103712235_103712361_103713593
transcript_14619.known	chr1	+	980	4	FSM	ENSG00000135778.12	ENST00000490807.5	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	228.663265280825	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTACTGCTTAATAAAT	-11	True	NA	-26	True	AAGAAA	-31	NA	232950613	232978751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232978162
transcript_146191.nnic	chrX	+	3474	9	NNC	ENSG00000123560.14	novel	2896	7	NA	NA	-31143	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	48.4327820282915	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	-3	True	NA	14	True	AATAAA	-23	NA	103742574	103792619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_103743108_103746874_103746923_103776852_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_146193.known	chrX	+	2896	7	FSM	ENSG00000123560.14	ENST00000619236.1	2896	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_6	24.7549097262655	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	9	True	NA	14	True	AATAAA	-23	NA	103776849	103792619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_146195.known	chrX	-	3772	3	FSM	ENSG00000123570.4	ENST00000243298.3	3772	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAATGTTTGTGTTTATTC	-15	True	NA	NA	False	AATAAA	-24	NA	103832257	103822326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103825827_103827004_103827079_103832059
transcript_14620.known	chr1	+	1762	5	FSM	ENSG00000135778.12	ENST00000366627.4	1762	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	240.373147418758	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGAACTCTTTGTT	15	True	NA	15	True	AATAAA	-17	NA	232950639	232977528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232976341
transcript_146205.known	chrX	+	1666	4	FSM	ENSG00000158427.15	ENST00000419165.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	117.740769867064	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGGTTCATTCTG	8	True	NA	NA	False	AATAAA	-25	NA	103918895	103965987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103919293_103962020_103962724_103964505_103964623_103965538
transcript_146207.known	chrX	+	663	4	FSM	ENSG00000158427.15	ENST00000569577.1	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	107.058654743816	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAATCGTTGTTGTCT	27	False	NA	NA	False	AATAAA	-6	NA	103962674	103965968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103962724_103964227_103964295_103964505_103964623_103965538
transcript_146209.known	chrX	+	2002	2	FSM	ENSG00000158427.15	ENST00000455723.1	2002	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTCAAAAGAAAAAGA	5	True	NA	NA	False	CATAAA	-33	NA	103919186	103932911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103919293_103931015
transcript_14621.known	chr1	-	580	1	FSM	ENSG00000231940.1	ENST00000443360.1	580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	531	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTAAACAAAAATGACTAAA	6280	False	NA	NA	False	NA	NA	NA	233289447	233288867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_233288900_233289400
transcript_146211.known	chrX	-	576	2	FSM	ENSG00000231728.5	ENST00000674336.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAACTATGTTGAATTGGC	NA	False	NA	NA	False	AGTAAA	-12	NA	103919193	103845150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103845365_103918831
transcript_146212.known	chrX	-	575	2	FSM	ENSG00000231728.5	ENST00000674328.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGTCCAACATTTT	60	False	NA	-16	True	ATTAAA	-11	NA	103919037	103881746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103882116_103918831
transcript_146213.known	chrX	-	1918	4	FSM	ENSG00000231728.5	ENST00000653685.2	1918	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.4142135623731	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGATCATATTTGTTA	9	True	NA	NA	False	AATAAA	-26	NA	103919088	103880645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103882116_103918086_103918226_103918408_103918461_103918831
transcript_146214.known	chrX	+	652	3	FSM	ENSG00000158427.15	ENST00000540220.6	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	14.5	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	4	True	NA	NA	False	AATAAA	-14	NA	103962626	103965976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103962724_103964505_103964623_103965538
transcript_146216.nnic	chrX	+	789	5	NNC	ENSG00000101812.15	novel	1875	3	NA	NA	-7494	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGTGTAATTAGACAAG	NA	False	NA	NA	False	AATAAA	-21	NA	104032461	104042454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_104032644_104032788_104032975_104040827_104040887_104041087_104041107_104042111
transcript_146223.nnic	chrX	-	867	4	NNC	ENSG00000269226.7	novel	947	3	NA	NA	-172	-319	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_3	104.512625499931	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	104076384	104072886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104073325_104074240_104074358_104074568_104074636_104076139
transcript_146225.known	chrX	-	2286	3	FSM	ENSG00000269226.7	ENST00000620307.4	2286	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	119	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAAGGGTATTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	104076194	104063870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_104065985_104074240_104074358_104076139
transcript_146228.known	chrX	+	1241	4	FSM	ENSG00000166707.12	ENST00000422784.5	1241	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.24721912892465	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	14	False	NA	10	True	TATAAA	-8	NA	104112543	104115842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_104113002_104113194_104113247_104113433_104113574_104115251
transcript_14623.known	chr1	+	2061	3	FSM	ENSG00000135750.15	ENST00000366621.8	2061	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	22.5	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGCTTTCATATATCA	4	True	NA	18	True	AATAAA	-23	NA	233614105	233672514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_233614527_233666594_233666991_233671270
transcript_146233.known	chrX	+	312	3	FSM	ENSG00000166707.12	ENST00000603049.1	312	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGAAATAACGGGGGAA	330	False	NA	NA	False	AATAAA	-33	NA	104112888	104113580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_104113002_104113194_104113247_104113433
transcript_146237.nnic	chrX	-	507	3	NNC	ENSG00000269743.3	novel	731	2	NA	NA	-9	-319	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGGTGGTTTATTAC	-5	True	NA	NA	False	ATTAAA	-23	NA	104156997	104130922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104131224_104144505_104144592_104156877
transcript_146238.nnic	chrX	-	512	3	NNC	ENSG00000269743.3	novel	731	2	NA	NA	-9	-326	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGTTTTGGGGTGGT	-5	True	NA	NA	False	ATTAAA	-16	NA	104156997	104130929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104131224_104131847_104131946_104156877
transcript_146239.known	chrX	-	731	2	FSM	ENSG00000269743.3	ENST00000467290.1	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATAGTGGGATGCTT	4	True	NA	NA	False	NA	NA	NA	104156988	104130603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_104131224_104156877
transcript_14624.known	chr1	-	1723	2	FSM	ENSG00000233332.1	ENST00000412483.1	1723	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTTGTTATCTCGTT	NA	False	NA	NA	False	CATAAA	-32	NA	234215088	234212605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234214108_234214867
transcript_146241.known	chrX	+	7624	6	FSM	ENSG00000123575.9	ENST00000493442.2	7624	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	13.6381816969859	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTTTCTT	4	True	NA	24	True	AATAAA	-24	NA	104166452	104195902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188307_104189607
transcript_146247.nic	chrX	+	1489	11	ISM	ENSG00000123572.17	ENST00000428173.3	5201	23	-74	33229	-32	11355	5prime_fragment	FALSE	canonical	2	9	junction_2	2.93428015022424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCCAATAATATGCCA	-7	True	NA	NA	False	AATAAA	-24	NA	105822506	105906718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_105822903_105831053_105831120_105880198_105880256_105881707_105881780_105888293_105888420_105893831_105893943_105895432_105895524_105898583_105898715_105900617_105900673_105905264_105905344_105906413
transcript_146248.known	chrX	+	8066	29	FSM	ENSG00000123572.17	ENST00000243300.14	8066	29	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_24	5.2336967463403	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTTGATGTCATTATTGA	-7	True	NA	7	True	AATAAA	-14	NA	105822538	105958610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_105822903_105831053_105831120_105880198_105880256_105881707_105881780_105888293_105888420_105893831_105893943_105895432_105895524_105898583_105898715_105900617_105900673_105905264_105905344_105906413_105906590_105908239_105908304_105908726_105909883_105912647_105912756_105915729_105915798_105917577_105917673_105921963_105922062_105923117_105923483_105924694_105925032_105934257_105934445_105935169_105935326_105937438_105937583_105939873_105940033_105943940_105944042_105945871_105946016_105946314_105946465_105949574_105949735_105953033_105953174_105955504
transcript_146249.known	chrX	+	4173	4	FSM	ENSG00000157502.13	ENST00000357175.6	4173	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGATTTTTACTTCATC	-4	True	NA	16	True	AATAAA	-17	NA	106168304	106208956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106168426_106171011_106171140_106203984_106204171_106205218
transcript_146250.known	chrX	+	3957	3	FSM	ENSG00000157502.13	ENST00000372552.1	3957	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGATTTTTACTTCAT	3	True	NA	15	True	AATAAA	-16	NA	106201735	106208955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106201770_106203984_106204171_106205218
transcript_146252.known	chrX	+	3852	14	FSM	ENSG00000147231.14	ENST00000372548.9	3852	14	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	7.15095061334898	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTGGTCTCCTGTC	16	True	NA	6	True	ATTAAA	-16	NA	106611977	106679439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637925_106639526_106639688_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_146253.known	chrX	+	2880	13	FSM	ENSG00000147231.14	ENST00000421550.1	2880	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	9.14201229975594	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAACTTTTTGGTCTCCTG	588	False	NA	4	True	ATTAAA	-14	NA	106612656	106679437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637795_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_146254.nnic	chrX	-	544	4	Antisense	novelGene_ENSG00000133135.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGCTCTTATATAGTG	NA	False	NA	NA	False	CATAAA	-17	NA	106783845	106730188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_106730397_106751887_106751969_106752222_106752358_106783725
transcript_146258.known	chrX	+	2589	12	FSM	ENSG00000133138.20	ENST00000310452.6	2589	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	4.23093682844367	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTGTGTTTCTGA	-26	True	NA	NA	False	AATAAA	-26	NA	106802688	106849831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106849244
transcript_146259.known	chrX	+	4098	7	FSM	ENSG00000133138.20	ENST00000481617.6	4098	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	3.39934634239519	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATTTATAAGAAAAA	-10	True	NA	NA	False	AATGAA	-4	NA	106802704	106830083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169
transcript_14626.known	chr1	-	438	1	FSM	ENSG00000235605.1	ENST00000422958.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	20	False	NA	NA	False	NA	NA	NA	234357141	234356703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234356700_234357100
transcript_146266.nic	chrX	+	1418	4	ISM	ENSG00000133138.20	ENST00000481617.6	4098	7	-37	7235	-5	1853	5prime_fragment	FALSE	canonical	3	8	junction_1	4.49691252107735	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACATTAGCTGGGCAT	-47	True	NA	NA	False	AATATA	-33	NA	106802667	106822848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976
transcript_146267.known	chrX	+	5729	21	FSM	ENSG00000133138.20	ENST00000357242.10	5729	21	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_11	4.21040378111174	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTTACTTAAAAAGATTA	-42	True	NA	NA	False	AATAAA	-23	NA	106802672	106876150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106850024_106850311_106853520_106853651_106854197_106854297_106865558_106865628_106865792_106866034_106866796_106866863_106868392_106868477_106869484_106869542_106870715_106870814_106873569
transcript_146269.known	chrX	-	2579	8	FSM	ENSG00000089682.17	ENST00000372487.5	2579	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	27.4114529914421	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATGTGT	9	True	NA	NA	False	NA	NA	NA	107118800	107064419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107065759_107067555_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_146270.known	chrX	-	3315	8	FSM	ENSG00000089682.17	ENST00000495517.5	3315	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.8704294988351	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTACAGACAGATACAT	-14	True	NA	NA	False	AAGAAA	-3	NA	107118823	107066299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107067694_107069254_107070426_107088734_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_146271.known	chrX	-	1662	7	FSM	ENSG00000089682.17	ENST00000372479.7	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	16.709943812659	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	5	True	NA	-14	True	AATAAA	-21	NA	107118804	107067137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_146274.known	chrX	-	1755	9	FSM	ENSG00000198088.10	ENST00000372466.8	1755	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	11.3074919854051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCAGTAACCTATAATTTA	2	True	NA	-4	True	ATTAAA	-19	NA	107206433	107123426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107193028_107193073_107206272
transcript_146283.known	chrX	-	1515	7	FSM	ENSG00000198088.10	ENST00000484614.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	7.03957069398096	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	2	True	NA	-49	True	AATAAA	-21	NA	107206433	107123471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107167648_107167785_107175088_107175194_107206272
transcript_146287.known	chrX	+	2070	7	FSM	ENSG00000147224.13	ENST00000372435.10	2070	7	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	23.0120741254576	10225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	6	True	NA	19	True	AATAAA	-19	NA	107628509	107651026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_146291.known	chrX	+	1434	6	FSM	ENSG00000147224.13	ENST00000372418.4	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	123.427063482852	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAACCCCAAACCTAGTC	-14	True	NA	NA	False	NA	NA	NA	107628489	107650469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107639294_107639479_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_146293.known	chrX	+	996	6	FSM	ENSG00000147224.13	ENST00000674826.1	996	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	116.072391204799	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCCCACATCAGGTATA	12	True	NA	82	True	NA	NA	NA	107628515	107650142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_146295.known	chrX	+	444	2	FSM	ENSG00000147224.13	ENST00000646815.1	444	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACTTTGTGATTGGCAA	6	True	NA	NA	False	AATAAA	-16	NA	107628509	107630219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107630016
transcript_146296.known	chrX	+	1450	7	FSM	ENSG00000147224.13	ENST00000643795.2	1450	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	116.36067014054	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGGGTCTGTATCATAC	NA	False	NA	18	True	AATAAA	-18	NA	107628427	107651025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647703_107650577
transcript_146297.known	chrX	-	956	4	FSM	ENSG00000157514.18	ENST00000506081.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.0901930404388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTCCACTCCAGCGACA	-3	True	NA	NA	False	NA	NA	NA	107777067	107714369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107714750_107715898_107715951_107775099_107775526_107776969
transcript_146298.known	chrX	-	1812	3	FSM	ENSG00000157514.18	ENST00000372390.8	1812	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	36	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	5423	False	NA	NA	False	AATAAA	-27	NA	107716545	107713220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107714750_107715898_107715951_107716314
transcript_146299.known	chrX	-	2027	3	FSM	ENSG00000157514.18	ENST00000372397.6	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	13	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	4833	False	NA	NA	False	AATAAA	-27	NA	107717135	107713220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107714750_107715898_107715951_107716689
transcript_146300.known	chrX	-	2269	3	FSM	ENSG00000157514.18	ENST00000372383.9	2269	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	-21	True	NA	NA	False	AATAAA	-27	NA	107775787	107713220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107714750_107715898_107715951_107775099
transcript_14631.known	chr1	+	641	3	FSM	ENSG00000168275.16	ENST00000366613.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	250	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTTGTTTTGTTTTT	6	True	NA	4	True	AGTAAA	-17	NA	234373682	234384045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_234373841_234374229_234374390_234383722
transcript_146311.known	chrX	-	779	6	FSM	ENSG00000101843.19	ENST00000372295.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	242.225019351842	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTTCTACTGTTGT	-3	True	NA	NA	False	NA	NA	NA	108091542	108084774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_146312.known	chrX	-	878	6	FSM	ENSG00000101843.19	ENST00000372296.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	282.784299422723	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTAATGTTCCTCCAT	-3	True	NA	NA	False	NA	NA	NA	108091542	108084596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087764_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_146313.known	chrX	-	1470	5	FSM	ENSG00000101843.19	ENST00000217958.8	1470	5	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_2	35.7936796096741	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAATTTTTCTTTCAA	-3	True	NA	-6	True	AATAAA	-13	NA	108091542	108084206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108088751_108088851_108091406
transcript_146314.known	chrX	-	768	5	FSM	ENSG00000101843.19	ENST00000361815.9	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	234.772762474696	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTACTTGTTCGAA	-3	True	NA	NA	False	TATAAA	-19	NA	108091542	108084829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087764_108087853_108087952_108088100_108088751_108088851_108091406
transcript_146315.known	chrX	-	713	4	FSM	ENSG00000101843.19	ENST00000340200.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	267.802580686263	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGTTCCTGCTGAG	44	False	NA	NA	False	TATAAA	-6	NA	108091520	108084842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108091406
transcript_146317.known	chrX	+	2501	14	FSM	ENSG00000101844.18	ENST00000372246.7	2501	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.37013569768335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	10	True	NA	14	True	AATAAA	-22	NA	108091783	108154671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108091837_108126076_108126188_108126792_108127095_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_146318.known	chrX	+	2205	13	FSM	ENSG00000101844.18	ENST00000372232.8	2205	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.60901893634161	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	4	True	NA	14	True	AATAAA	-22	NA	108091777	108154671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_146321.known	chrX	+	2129	12	FSM	ENSG00000101844.18	ENST00000345734.7	2129	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	7.69028581183876	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	-7	True	NA	14	True	AATAAA	-22	NA	108091667	108154671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137885_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_146324.nic	chrX	-	1141	14	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-41	40940	-41	17244	5prime_fragment	FALSE	canonical	3	114	junction_7	26.8414146136439	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAAAAGGGAATCCCTG	1012	False	NA	6	True	NA	NA	NA	108438471	108196547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_108196580_108202927_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_146325.nic	chrX	-	1109	13	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-41	47320	-41	10864	5prime_fragment	FALSE	canonical	3	114	junction_6	27.8581476212775	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTCTCTATTTGATC	1012	False	NA	NA	False	NA	NA	NA	108438471	108202927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_108202982_108204319_108204413_108205438_108205481_108205659_108205696_108206517_108206581_108209968_108210005_108211671_108211741_108214111_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_146328.nic	chrX	-	2622	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-41	56598	-41	1586	5prime_fragment	FALSE	canonical	3	139	junction_2	25.2871508873578	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAGTATAAAACAGAG	1012	False	NA	NA	False	AATAAA	-17	NA	108438471	108212205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_14633.known	chr1	-	575	2	FSM	ENSG00000231663.2	ENST00000451795.2	644	2	69	0	69	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATCTCTCAGCAGAGTC	64	False	NA	NA	False	AATAAA	-20	NA	234373593	234372806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234373211_234373422
transcript_146330.nic	chrX	-	888	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-41	58332	-41	-148	5prime_fragment	FALSE	canonical	3	139	junction_2	25.2871508873578	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTTGCAGTGGGGTGT	1012	False	NA	-10	True	AGTAAA	-15	NA	108438471	108213939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_146331.known	chrX	-	865	6	FSM	ENSG00000197565.17	ENST00000468338.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	61.6817639177091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAATATTGAGGAATGTT	11	False	NA	NA	False	AATACA	-31	NA	108439472	108213791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108439357
transcript_146335.known	chrX	-	1889	4	FSM	ENSG00000197565.17	ENST00000461897.5	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	86.4908472999696	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGTATGTATGTA	2	True	NA	-19	True	AATAAA	-19	NA	108438430	108267641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108438185
transcript_146338.nnic	chrX	-	1815	3	NNC	ENSG00000197565.17	novel	6570	45	NA	NA	-41	-140854	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGCAAATGGCTGCAG	1012	False	NA	NA	False	AATAAA	-16	NA	108438471	108408495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_108409973_108437941_108437994_108438185
transcript_14634.known	chr1	+	697	3	FSM	ENSG00000168275.16	ENST00000619305.1	697	3	0	0	0	0	multi-exon	TRUE	canonical	3	532	junction_2	5.5	6375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTGTTTTTGTT	12	True	NA	7	True	AGTAAA	-20	NA	234373467	234384048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_234373679_234374229_234374390_234383722
transcript_146340.nic	chrX	-	1190	2	ISM	ENSG00000197565.17	ENST00000461897.5	1889	4	-41	169448	-41	-169448	5prime_fragment	FALSE	canonical	3	210	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGAAGTTGTTCAATTGTT	1012	False	NA	NA	False	AATAAA	-17	NA	108438471	108437089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_108437994_108438185
transcript_146345.known	chrX	+	782	6	FSM	ENSG00000188153.14	ENST00000470339.1	782	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	3.54400902933387	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTACTTACCAAACCCTT	63	False	NA	NA	False	ATTAAA	-36	NA	108439941	108569035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108440207_108539745_108539806_108559063_108559154_108563881_108563927_108568628_108568674_108568758
transcript_146347.known	chrX	+	522	3	FSM	ENSG00000237863.3	ENST00000656850.1	522	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAAGTGCTTTGAGT	2877	False	NA	NA	False	TTTAAA	-26	NA	108736480	108738689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108736592_108737729_108737880_108738428
transcript_146348.known	chrX	+	1489	3	FSM	ENSG00000237863.3	ENST00000436013.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCCACTATTCTTTTT	-11	True	NA	NA	False	TTTAAA	-26	NA	108736512	108739223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108736592_108737264_108737880_108738428
transcript_14635.known	chr1	+	1013	2	FSM	ENSG00000168275.16	ENST00000366612.1	1013	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTGTTTTTG	24	False	NA	5	True	AGTAAA	-18	NA	234373700	234384046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_234374390_234383722
transcript_146350.known	chrX	-	6563	2	FSM	ENSG00000133124.12	ENST00000372129.4	6563	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTAGAGATTCATTTT	-1	True	NA	-1	True	AATAAA	-18	NA	108736563	108719945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108722524_108732578
transcript_146352.known	chrX	+	2692	5	FSM	ENSG00000101888.12	ENST00000218004.5	2692	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	58.349700084919	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	0	True	NA	13	True	AATAAA	-14	NA	109535780	109544684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_109535978_109536936_109537022_109538044_109538132_109541474_109541620_109542506
transcript_146353.known	chrX	+	2602	4	FSM	ENSG00000101888.12	ENST00000372106.6	2602	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	5.31245915016974	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAAGGTCTTTTG	-7	True	NA	27	True	AATAAA	-28	NA	109536843	109544698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_109537022_109538044_109538132_109541474_109541620_109542506
transcript_146354.known	chrX	+	1085	4	FSM	ENSG00000101888.12	ENST00000372103.1	1085	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	55.934485486743	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTCAGTGGTCGTT	135	False	NA	NA	False	NA	NA	NA	109537117	109543206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_109537271_109538044_109538132_109541474_109541620_109542506
transcript_146356.known	chrX	-	5032	16	FSM	ENSG00000068366.21	ENST00000348502.10	5032	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	46.4698707647104	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATTTGTACTTCATT	475	False	NA	-17	True	AATAAA	-16	NA	109733403	109641336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683373_109696143_109696197_109733138
transcript_146357.known	chrX	-	4891	16	FSM	ENSG00000068366.21	ENST00000672401.1	4891	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_14	28.8286894140773	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTTGTACTTCATTAT	-11	True	NA	-15	True	AATAAA	-18	NA	109733257	109641334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109696143_109696197_109733138
transcript_146358.known	chrX	-	4976	16	FSM	ENSG00000068366.21	ENST00000671846.1	4976	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	51.6175680687625	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTGTTTAGATTTTGTG	-23	True	NA	-20	True	NA	NA	NA	109733269	109641438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683553_109696143_109696197_109733138
transcript_146359.known	chrX	-	5182	16	FSM	ENSG00000068366.21	ENST00000469796.7	5182	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	50.2065068824085	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTTGTACTTCATTAT	-11	True	NA	-15	True	AATAAA	-18	NA	109733257	109641334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683667_109696143_109696197_109733138
transcript_146362.known	chrX	-	4602	15	FSM	ENSG00000068366.21	ENST00000672282.1	4602	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	47.3368842684528	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGATTTGGAGAGAA	26	True	NA	-115	True	GATAAA	-11	NA	109733220	109641533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109733138
transcript_146368.nnic	chrX	-	1030	2	NNC	ENSG00000068366.21	novel	464	3	NA	NA	9511	544	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGACTCTTCTCTCAGA	-6	True	NA	0	True	AATAAA	-18	NA	109625175	109623699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_109624322_109624767
transcript_146369.known	chrX	+	5570	7	FSM	ENSG00000157600.12	ENST00000372068.7	5570	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.69684550213647	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	23	True	NA	17	True	ATTAAA	-14	NA	110003113	110177788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_110003179_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_14637.known	chr1	-	1650	8	FSM	ENSG00000059588.10	ENST00000462259.5	1650	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	58.6459456294765	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTCCTTTAATAAAATAT	NA	False	NA	0	True	AATAAA	-20	NA	234406380	234391377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902
transcript_146370.known	chrX	+	5567	7	FSM	ENSG00000157600.12	ENST00000372073.5	5567	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.29983164553722	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	4	True	NA	17	True	ATTAAA	-14	NA	110003094	110177788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_110003157_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_146373.known	chrX	-	5350	6	FSM	ENSG00000101935.12	ENST00000262844.10	5350	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	17.3020230031057	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCATTTTATGTTTCTT	25	True	NA	-7	True	AATAAA	-14	NA	110318085	110194185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110264488_110264600_110317598
transcript_146374.known	chrX	-	3052	5	FSM	ENSG00000101935.12	ENST00000372059.6	3052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	63.4049485450465	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGTAAATAAAACAAGCAA	26	True	NA	NA	False	AAAAAG	-7	NA	110318084	110196371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110317598
transcript_146376.nic	chrX	-	710	2	ISM	ENSG00000101935.12	ENST00000473662.1	418	3	-379	44962	-65	44708	5prime_fragment	FALSE	canonical	3	128	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATGAAACTTGAATCTGA	-40	True	NA	NA	False	ATTAAA	-9	NA	110318150	110264441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_110264600_110317598
transcript_146377.known	chrX	-	546	2	FSM	ENSG00000101935.12	ENST00000496695.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGTGTGTTTCTTTTCT	3516	False	NA	0	True	AATAAA	-18	NA	110317756	110309149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_110309538_110317598
transcript_146379.known	chrX	-	1658	12	FSM	ENSG00000101938.15	ENST00000444321.2	1658	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	8.89609441652732	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACATCTCCTCCAAAGAG	14	True	NA	NA	False	NA	NA	NA	110795819	110676056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_110676362_110679335_110679426_110681481_110681650_110688593_110688804_110694162_110694332_110700653_110700722_110719834_110719929_110721384_110721528_110759660_110759755_110762694_110762808_110792087_110792216_110795743
transcript_146391.known	chrX	+	2477	15	FSM	ENSG00000077264.16	ENST00000425146.5	2477	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.03871569806491	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGCAAAAAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	110944284	111220918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_110944629_111123076_111123279_111142095_111142197_111147736_111147891_111152409_111152448_111162914_111163047_111163561_111163728_111173017_111173082_111192126_111192176_111192505_111192619_111194300_111194419_111195841_111195942_111196443_111196641_111216420_111216559_111220357
transcript_146400.known	chrX	-	3532	13	FSM	ENSG00000077274.9	ENST00000324068.2	3532	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	8.44590630621328	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTGACTTGAATTGA	11	True	NA	1	True	AATAAA	-21	NA	111270483	111245098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_111246760_111247367_111247505_111247870_111247993_111248568_111248772_111248934_111249058_111250916_111251104_111251208_111251287_111251548_111251743_111252306_111252500_111253007_111253217_111254271_111254404_111263771_111263952_111270370
transcript_146402.known	chrX	-	2476	7	FSM	ENSG00000077279.20	ENST00000488120.2	2476	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49071198499986	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTAGTTTAGAAATTAT	NA	False	NA	NA	False	AAAAAG	-9	NA	111412429	111300607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_111301744_111312641_111312737_111330918_111331042_111333050_111333154_111400989_111401331_111410034_111410421_111412137
transcript_146404.known	chrX	+	4113	27	FSM	ENSG00000101901.12	ENST00000394780.8	4113	27	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_17	13.4541188343744	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGGGATTTTTTCTTTT	-31	True	NA	20	True	AATAAA	-25	NA	111681169	111760649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111744667_111744905_111752789_111752831_111757587_111757763_111759733
transcript_146406.known	chrX	+	693	5	FSM	ENSG00000101901.12	ENST00000473389.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	34.1787580230763	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGGAAATTTTATGTT	-12	True	NA	13	True	AATAAA	-19	NA	111681188	111688128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111686136_111686175_111687886
transcript_146409.known	chrX	+	1098	5	FSM	ENSG00000101901.12	ENST00000492038.5	1098	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.5538985608922	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAGGACTTATACCAA	-7	True	NA	NA	False	NA	NA	NA	111681193	111688642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681300_111682235_111682295_111684964_111685104_111686136_111686175_111687886
transcript_146421.known	chrX	+	585	4	FSM	ENSG00000101901.12	ENST00000623255.1	585	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.8958996814325	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATTAATAAACTTCCTA	33	True	NA	-18	True	ATTAAA	-36	NA	111681233	111688097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681300_111682131_111682301_111684964_111685104_111687886
transcript_146426.nic	chrX	+	1252	4	NIC	ENSG00000101901.12	novel	1098	5	NA	NA	-10	158	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	35.5246393366632	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGTTTTAAAATTGAC	NA	False	NA	6	True	AATAAA	-23	NA	111681159	111688800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_111681300_111682235_111682295_111684964_111685104_111687886
transcript_146427.known	chrX	+	916	4	FSM	ENSG00000101901.12	ENST00000468657.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	29.5296461204668	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTGGAATTGGAATC	-22	True	NA	NA	False	NA	NA	NA	111681178	111688254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681425_111682131_111682295_111684964_111685104_111687886
transcript_14643.known	chr1	-	4615	2	FSM	ENSG00000168264.11	ENST00000366610.7	4615	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTCTGAGGCCTTTTTT	-13	True	NA	-7	True	AATAAA	-22	NA	234609525	234604268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234607853_234608494
transcript_146430.known	chrX	+	679	4	FSM	ENSG00000101901.12	ENST00000482374.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	35.5246393366632	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTTATGTTGTGCAC	-9	True	NA	19	True	AATAAA	-25	NA	111681191	111688134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681425_111682235_111682295_111684964_111685104_111687886
transcript_146433.known	chrX	+	620	4	FSM	ENSG00000101901.12	ENST00000482742.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.8854278742681	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATGTAATGTGATTA	0	True	NA	-75	True	AATAAA	-39	NA	111681662	111688040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681827_111682131_111682295_111684964_111685104_111687886
transcript_146435.known	chrX	+	458	4	FSM	ENSG00000101901.12	ENST00000623189.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	34.2928563989645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATTTTATGTTGTGC	150	False	NA	17	True	AATAAA	-23	NA	111681812	111688132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681827_111682235_111682295_111684964_111685104_111687886
transcript_146439.known	chrX	-	1559	4	FSM	ENSG00000182508.14	ENST00000371968.8	1559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTCTGCTAGATACT	-7	True	NA	NA	False	AATAAA	-26	NA	112679938	112630647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_112631602_112660626_112660726_112671008_112671405_112679828
transcript_146443.known	chrX	-	629	3	FSM	ENSG00000182508.14	ENST00000478229.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTTAAGCCAGTAGGT	49	False	NA	NA	False	TTTAAA	-22	NA	112680054	112631273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_112631602_112648638_112648714_112679828
transcript_146449.known	chrX	-	6888	12	FSM	ENSG00000126016.17	ENST00000304758.5	6888	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	5.95437196138648	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGAGGGAGCTTGTTATT	72	False	NA	NA	False	NA	NA	NA	112840815	112774502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_112778665_112778996_112779681_112780885_112781119_112782539_112782663_112790591_112790783_112791831_112791982_112804946_112805093_112809893_112809987_112811248_112811394_112815357_112815878_112832293_112832371_112840451
transcript_146450.known	chrX	-	7613	14	FSM	ENSG00000126016.17	ENST00000371959.9	7613	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	4.93987518707764	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCGTGTGGAAAATGCTT	-1	True	NA	-1	True	AATAAA	-21	NA	112840831	112774876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_112778665_112778996_112779681_112780885_112781119_112782539_112782663_112790591_112790783_112791831_112791982_112804946_112805093_112809893_112809987_112811248_112811394_112815357_112815878_112822254_112823189_112825071_112825221_112832293_112832371_112840451
transcript_146474.known	chrX	-	2292	3	FSM	ENSG00000241743.4	ENST00000649506.1	2292	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATAAGCAGGGGAAAAA	NA	False	NA	NA	False	AGTAAA	-25	NA	114059289	113961710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_113963600_114042367_114042485_114059003
transcript_146476.nic	chrX	-	1035	2	ISM	ENSG00000241743.4	ENST00000468762.3	764	5	-106	346489	62	-1078	5prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACAGTGAATGATAACT	NA	False	NA	NA	False	AATAAA	-10	NA	114059227	113962788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_113963600_114059003
transcript_146478.known	chrX	-	764	5	FSM	ENSG00000241743.4	ENST00000468762.3	764	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.79613860953409	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTTTGTTGGTTTCAG	69	False	NA	NA	False	AATAAA	-19	NA	114059121	113616299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_113616675_113618057_113618154_113938192_113938321_113963552_113963600_114059003
transcript_146484.nnic	chrX	+	1820	4	NNC	ENSG00000288595.1	novel	503	3	NA	NA	-138	2414	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	45.7553882680013	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	NA	False	NA	12	True	AATAAA	-15	NA	114040249	114058192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_114040637_114042335_114042534_114055650_114056545_114057851
transcript_146489.known	chrX	+	811	3	FSM	ENSG00000288595.1	ENST00000674257.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	42	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCCTCGGTCTCTTT	0	True	NA	3	True	AATAAA	-18	NA	114040387	114050858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_114040637_114042335_114042534_114050494
transcript_146491.known	chrX	+	503	3	FSM	ENSG00000288595.1	ENST00000674440.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	47.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGAACTATTGCAGAA	72	False	NA	NA	False	NA	NA	NA	114040459	114055778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_114040637_114042335_114042534_114055650
transcript_146497.nnic	chrX	-	1546	3	NNC	ENSG00000289287.1	novel	1603	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	3	True	ATTAAA	-18	NA	114606896	114594405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_114595599_114604483_114604586_114606645
transcript_146500.nnic	chrX	-	1769	3	FSM	ENSG00000289287.1	ENST00000692140.1	930	3	-37	-802	-37	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	3	True	ATTAAA	-18	NA	114606933	114594405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_114595599_114604483_114604772_114606645
transcript_146505.nnic	chrX	-	1481	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	-37	0	-37	0	multi-exon	FALSE	canonical	2	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	3	True	ATTAAA	-18	NA	114606933	114594405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_114595599_114606645
transcript_146507.nnic	chrX	-	679	2	FSM	ENSG00000289287.1	ENST00000691947.1	1444	2	-37	802	-37	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAACTCATGGGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	114606933	114595207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_114595599_114606645
transcript_146509.known	chrX	-	4953	21	FSM	ENSG00000130224.15	ENST00000317135.13	4953	21	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_17	6.60378679243962	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTGGTATTTCTTT	-2	True	NA	NA	False	GATAAA	-15	NA	115234096	115110615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_115113336_115122526_115122605_115122759_115122898_115123079_115123193_115123944_115124003_115126842_115126894_115130154_115130200_115149826_115149944_115150021_115150071_115156601_115156668_115163675_115163784_115165404_115165464_115165557_115165656_115165840_115165953_115166254_115166343_115170298_115170433_115179426_115179564_115179645_115179752_115184410_115184538_115188225_115188371_115233692
transcript_14651.known	chr1	-	3283	5	FSM	ENSG00000173726.11	ENST00000366607.5	3283	5	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_1	93.6199097414647	13897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTGGCGTATGTTT	1	True	NA	-39	True	ATTAAA	-15	NA	235128837	235109340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235112109_235113767_235113911_235119817_235119900_235122325_235122373_235128594
transcript_146518.known	chrX	+	3288	16	FSM	ENSG00000102024.19	ENST00000355899.8	3288	16	0	0	0	0	multi-exon	TRUE	canonical	3	1769	junction_8	166.852296624556	911	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCCAGTTCCTGC	-9	True	NA	23	True	AGTAAA	-25	NA	115561173	115650861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_115561261_115610242_115610324_115622245_115622410_115629197_115629328_115629834_115629968_115633999_115634082_115634880_115635047_115636835_115636979_115640407_115640504_115643312_115643509_115645020_115645100_115646071_115646187_115646401_115646536_115647549_115647674_115647892_115648018_115649428
transcript_14652.known	chr1	-	377	4	FSM	ENSG00000173726.11	ENST00000467767.5	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	429.924024295766	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAATTCTTGGTAGT	9041	False	NA	-11	True	AATAAA	-17	NA	235119899	235112024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235112109_235113767_235113911_235119338_235119407_235119817
transcript_146523.known	chrX	+	444	3	FSM	ENSG00000229335.2	ENST00000451869.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTATGTGTTCTTAT	65	False	NA	NA	False	NA	NA	NA	115840963	115843048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_115841079_115842643_115842764_115842839
transcript_146524.known	chrX	+	280	2	FSM	ENSG00000229335.2	ENST00000415394.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATGTGTTCTTATTA	-1	True	NA	NA	False	NA	NA	NA	115841009	115843050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_115841079_115842839
transcript_146530.known	chrX	-	3322	7	FSM	ENSG00000003096.14	ENST00000545703.5	3322	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	7.16472842006823	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTCTGAGACATCCC	NA	False	NA	-20	True	AATAAA	-14	NA	118116865	117897813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118116507
transcript_146531.known	chrX	+	4114	20	FSM	ENSG00000131725.14	ENST00000254029.8	4114	20	0	0	0	0	multi-exon	FALSE	canonical	2	83	junction_4	22.1414490788887	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTTATTTTTAATTG	-19	True	NA	30	True	ATTAAA	-40	NA	118346105	118449961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
transcript_146536.known	chrX	+	3877	18	FSM	ENSG00000131725.14	ENST00000371822.9	3877	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	46.4359513508087	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGACTTTATTTTTAA	238	False	NA	27	True	ATTAAA	-37	NA	118346072	118449958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118346581_118378418_118378453_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
transcript_146538.known	chrX	+	3996	11	FSM	ENSG00000131724.11	ENST00000371666.8	3996	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	15.577226967596	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGTTTTCCTTTGGT	3	True	NA	9	True	AATAAA	-21	NA	118727605	118794533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118791761
transcript_146539.known	chrX	+	2197	4	FSM	ENSG00000174460.4	ENST00000310164.3	2197	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.471404520791032	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTAATGTGTCTGTG	-1	True	NA	13	True	AATAAA	-15	NA	118823823	118826968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118824006_118824338_118824391_118824588_118824714_118825130
transcript_146543.known	chrX	+	1762	2	FSM	ENSG00000101856.10	ENST00000535419.2	1762	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGTGGTGACTTATTTA	7277	False	NA	15	True	AATAAA	-17	NA	119236244	119244465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119236692_119243150
transcript_146547.nnic	chrX	-	562	2	NNC	ENSG00000214992.6	novel	2719	4	NA	NA	-16059	-5387	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGTGGACCAACTTTAA	NA	False	NA	NA	False	AAAAAG	-31	NA	119273726	119254732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_119254863_119273294
transcript_146553.known	chrX	+	2507	5	FSM	ENSG00000077713.19	ENST00000217909.8	2507	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	4.54835134966506	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTTGGTCATTTATT	-18	True	NA	NA	False	ATTAAA	-21	NA	119399335	119454478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119399679_119406459_119406702_119410189_119410363_119452008_119452144_119452864
transcript_146561.known	chrX	+	775	4	FSM	ENSG00000005022.6	ENST00000460013.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2556.86531170929	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTCGTGATGAAGGAG	833	False	NA	NA	False	NA	NA	NA	119469276	119470940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119469384_119469660_119470148_119470372_119470514_119470900
transcript_146564.known	chrX	-	1874	2	FSM	ENSG00000224281.5	ENST00000446986.1	1874	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTACTATTTTTGCA	1531	False	NA	0	True	AATAAA	-13	NA	119468262	119466033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119467751_119468105
transcript_146565.known	chrX	+	1307	4	FSM	ENSG00000005022.6	ENST00000317881.9	1307	4	0	0	0	0	multi-exon	FALSE	canonical	3	5365	junction_3	274.699027219893	20405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACATTTTTAATAAATG	0	True	NA	-32	True	AATAAA	-19	NA	119468443	119471396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900
transcript_146567.known	chrX	-	2372	7	FSM	ENSG00000018610.15	ENST00000320339.8	2372	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	24.4040069569642	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	16	True	NA	-10	True	ATTAAA	-17	NA	119565373	119538148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565124
transcript_146568.known	chrX	-	2301	7	FSM	ENSG00000018610.15	ENST00000644802.2	2301	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	5.20949986936259	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTTAACCTTCTTGTA	-20	True	NA	-10	True	ATTAAA	-17	NA	119565409	119538148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119539790_119541327_119541421_119542504_119542595_119544352_119544492_119545462_119545505_119560267_119560386_119565231
transcript_146571.known	chrX	+	1771	6	FSM	ENSG00000077721.16	ENST00000630695.2	1771	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	239.921320436513	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGGTATCTTTTTTTTT	-1	True	NA	19	True	AATAAA	-21	NA	119574562	119584425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119574756_119574907_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
transcript_146575.known	chrX	-	4495	11	FSM	ENSG00000125354.24	ENST00000394610.7	4495	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	28.5979020209525	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	-5	True	NA	-4	True	ATTAAA	-16	NA	119693168	119616944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119620052_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_146577.known	chrX	-	1576	10	FSM	ENSG00000125354.24	ENST00000354228.8	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	45.3945664883658	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCTAAAGGAGAAGACT	25	False	NA	NA	False	NA	NA	NA	119693370	119616711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119616743_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_146578.known	chrX	-	2693	10	FSM	ENSG00000125354.24	ENST00000343984.5	2693	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	48.6828993729628	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTTTGATGTT	25	False	NA	NA	False	NA	NA	NA	119693370	119617638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119618787_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_146579.known	chrX	-	4652	10	FSM	ENSG00000125354.24	ENST00000354416.7	4652	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	49.2832578689035	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	25	False	NA	-4	True	ATTAAA	-16	NA	119693370	119616944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119620052_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_146587.known	chrX	-	1061	4	FSM	ENSG00000125354.24	ENST00000467310.1	1061	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.9938268580519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATAGCCTTACCGAAT	7377	False	NA	-6	True	AATAAA	-30	NA	119633424	119619308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119620052_119625334_119625397_119629317_119629509_119633359
transcript_146591.known	chrX	-	390	3	FSM	ENSG00000198918.8	ENST00000361575.4	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	10123	junction_2	751.5	35040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	-1	True	NA	-10	True	AATAAA	-23	NA	119791630	119786503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119786733_119789907_119790012_119791573
transcript_146592.known	chrX	-	1915	2	FSM	ENSG00000198918.8	ENST00000468844.1	1915	2	0	0	0	0	multi-exon	FALSE	canonical	3	11626	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGTTGTATTGTGGT	2	True	NA	-12	True	AATAAA	-21	NA	119791595	119786505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119786733_119789907
transcript_14660.known	chr1	-	1759	16	FSM	ENSG00000054267.22	ENST00000418304.1	1759	16	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_15	32.0621618457368	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATCAGGAAAAAGAAGTTAA	591	False	NA	NA	False	AGTAAA	-34	NA	235328196	235219926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327935
transcript_146600.known	chrX	-	2335	10	FSM	ENSG00000125351.13	ENST00000345865.6	2335	10	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	34.4978081250403	1689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTAAGTGTGTTTATT	-12	True	NA	-9	True	AATAAA	-20	NA	119852998	119834025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_146601.known	chrX	-	2343	11	FSM	ENSG00000125351.13	ENST00000276201.7	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	96.1846661375918	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTGTTTATTAACT	23	True	NA	-5	True	AATAAA	-24	NA	119852963	119834021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119840645_119840685_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_146602.known	chrX	-	1259	1	FSM	ENSG00000125352.6	ENST00000371442.4	1259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	734	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCCTGGATTAAAAGC	-18	True	NA	51	True	NA	NA	NA	119871733	119870474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119870500_119871700
transcript_146606.known	chrX	+	421	3	FSM	ENSG00000125356.7	ENST00000371437.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	2679	junction_2	50	27616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTCTTTTTTTTAAAT	-26	True	NA	6	True	AATAAA	-17	NA	119871831	119876662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119872014_119873303_119873394_119876513
transcript_146610.known	chrX	+	412	3	FSM	ENSG00000186471.13	ENST00000371422.5	412	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	0.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTTTGAAGTCTGG	7	True	NA	NA	False	AATAAA	-15	NA	119896192	119903652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119896268_119903213_119903393_119903494
transcript_146614.known	chrX	-	1394	9	FSM	ENSG00000101882.10	ENST00000652253.1	1394	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	57.0831356444265	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATTGATATAACTTTA	6	True	NA	-22	True	AATAAA	-5	NA	119943604	119925069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936429_119936611_119936683_119938729_119938811_119943219
transcript_146615.nnic	chrX	+	1576	3	FSM	ENSG00000258545.7	ENST00000687648.1	1536	3	-41	1	-41	0	multi-exon	FALSE	canonical	3	15	junction_1	6	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTCTCTGATTCCTT	NA	False	NA	12	True	AATAAA	-17	NA	120140668	120146854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_120140850_120143722_120143901_120145637
transcript_146616.known	chrX	+	1340	2	FSM	ENSG00000258545.7	ENST00000665317.1	1340	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGGGCTGAGTACTGG	219	False	NA	-46	True	NA	NA	NA	120143719	120146796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_120143901_120145637
transcript_146617.known	chrX	-	1257	4	FSM	ENSG00000203989.5	ENST00000371402.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACGGACTCTCGTCTCA	-1	False	NA	NA	False	AATAAA	-30	NA	120077690	120072263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120072846_120075899_120075946_120076876_120077289_120077473
transcript_146618.known	chrX	-	747	3	FSM	ENSG00000101883.5	ENST00000217999.3	747	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTTTGTGTGCCAA	-1	True	NA	NA	False	AATAAA	-18	NA	120115913	120109050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120109303_120112868_120112915_120115464
transcript_146625.known	chrX	-	2384	3	FSM	ENSG00000233382.8	ENST00000452254.3	2424	3	40	0	10	0	multi-exon	FALSE	canonical	3	13	junction_1	0.5	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGTGCACTGACTT	-14	True	NA	NA	False	AATAAA	-14	NA	120245233	120236457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120238243_120240226_120240356_120244763
transcript_146627.known	chrX	+	5253	3	FSM	ENSG00000177485.7	ENST00000557385.2	5253	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	10	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	-8	True	NA	15	True	AATAAA	-16	NA	120250811	120258398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_120250978_120252668_120252771_120253413
transcript_146628.known	chrX	+	5211	2	FSM	ENSG00000177485.7	ENST00000326624.2	5211	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	31	False	NA	15	True	AATAAA	-16	NA	120250751	120258398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_120250978_120253413
transcript_146629.known	chrX	-	3172	7	FSM	ENSG00000125355.16	ENST00000440464.5	3172	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.75378527364305	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTTGTGTCAAGGTAG	-1	True	NA	-1	True	AATAAA	-18	NA	120311536	120258650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120261029_120268243_120268388_120287153_120287223_120291250_120291341_120293988_120294052_120304348_120304492_120311251
transcript_146630.known	chrX	-	387	2	FSM	ENSG00000125355.16	ENST00000480821.1	387	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGCGTAGTTATTTAC	133	False	NA	NA	False	NA	NA	NA	120311402	120309892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120310129_120311251
transcript_146631.known	chrX	-	6535	9	FSM	ENSG00000005893.16	ENST00000200639.9	6535	9	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	88.5744743139918	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATAACCTCATTTTT	-3	True	NA	-2	True	AATAAA	-20	NA	120469296	120426147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120431463_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_146632.known	chrX	-	4030	9	FSM	ENSG00000005893.16	ENST00000371335.4	4030	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	75.3027223943464	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTACCTTTTTTCCCG	12	False	NA	-3	True	AATAAA	-24	NA	120469306	120436493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_146634.known	chrX	-	4906	21	FSM	ENSG00000158290.19	ENST00000336592.11	4906	21	0	0	0	0	multi-exon	FALSE	non_canonical	3	47	junction_20	35.2707740204266	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	7	True	NA	-10	True	AATAAA	-18	NA	120561453	120524611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
transcript_146636.known	chrX	-	4418	20	FSM	ENSG00000158290.19	ENST00000371323.3	4418	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	24	junction_19	40.0387623819068	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	-1	True	NA	-10	True	AATAAA	-18	NA	120559915	120524611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120559778
transcript_146641.known	chrX	+	9577	6	FSM	ENSG00000232119.8	ENST00000371317.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	21.3597752797168	3257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTGTCTTTACTT	-21	True	NA	NA	False	AATAAA	-19	NA	120604100	120621159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_120604248_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
transcript_146656.known	chrX	-	1024	3	FSM	ENSG00000158290.19	ENST00000486604.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGTGTGTAAGAACTA	5	True	NA	NA	False	AATAAA	-15	NA	120575524	120571175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120572001_120574550_120574631_120575405
transcript_146657.known	chrX	-	1636	2	FSM	ENSG00000171155.8	ENST00000304661.6	1636	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCTGAGAAAAAAAACTGA	-7	True	NA	-19	True	ATTAAA	-18	NA	120630054	120625673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120627172_120629916
transcript_14666.known	chr1	-	2315	11	FSM	ENSG00000054267.22	ENST00000466653.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	12.4402572320672	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	570	False	NA	NA	False	NA	NA	NA	235328217	235228310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_146667.nnic	chrX	+	861	5	Intergenic	novelGene_91	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_2	36.9484438102608	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGTGTATTATTTG	NA	False	NA	17	True	AGTAAA	-19	NA	122222325	122248544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_+_122222603_122227324_122227431_122229771_122229895_122230631_122230758_122248315
transcript_146668.nnic	chrX	+	807	5	Intergenic	novelGene_92	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	25	junction_4	32.7604945017623	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGTGTATTATTTG	NA	False	NA	17	True	AGTAAA	-19	NA	122222325	122248544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_+_122222603_122227324_122227431_122229825_122229895_122230631_122230758_122248315
transcript_146676.known	chrX	+	609	1	FSM	ENSG00000280142.1	ENST00000624911.1	609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACTTATTGCCCTTGT	2820	False	NA	NA	False	AATAAA	-22	NA	122242007	122242616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_122242000_122242600
transcript_146677.nic	chrX	+	2529	11	ISM	ENSG00000125675.20	ENST00000620581.4	2991	17	-168	70639	50	56774	5prime_fragment	FALSE	canonical	2	3	junction_8	7.73369252039412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACATGGTTTCCTAATTA	259	False	NA	13	True	AGTAAA	-24	NA	123184202	123418097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_123184645_123185831_123185991_123253302_123253543_123326025_123326214_123354909_123354964_123394967_123395130_123398635_123398804_123402993_123403099_123403411_123403520_123404707_123404915_123417401
transcript_146684.known	chrX	+	784	5	FSM	ENSG00000125675.20	ENST00000616590.4	784	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	12.4197423483742	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	209	False	NA	24	True	AATAAA	-24	NA	123184152	123204683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123184220_123184517_123184645_123185831_123185991_123202635_123202783_123204399
transcript_146690.known	chrX	+	936	4	FSM	ENSG00000125675.20	ENST00000611689.4	936	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	13.4412301024373	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	6	True	NA	24	True	AATAAA	-24	NA	123184298	123204683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123184645_123185831_123185991_123202635_123202783_123204399
transcript_146691.nic	chrX	+	1206	4	ISM	ENSG00000125675.20	ENST00000620581.4	2991	17	-168	162346	50	-34933	5prime_fragment	FALSE	canonical	3	11	junction_3	8.37987005998436	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAGAAAAGAGAAGAAAAT	259	False	NA	NA	False	AAAAAG	-4	NA	123184202	123326390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_123184645_123185831_123185991_123253302_123253543_123326025
transcript_146694.nnic	chrX	+	770	4	NNC	ENSG00000125675.20	novel	784	5	NA	NA	261	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	261	False	NA	24	True	AATAAA	-24	NA	123184820	123204683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_123185001_123185831_123185991_123202635_123202783_123204399
transcript_146695.known	chrX	+	644	3	FSM	ENSG00000125675.20	ENST00000479118.1	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAGTAATTTTAGAACC	0	True	NA	58	True	AATAAA	-27	NA	123184559	123253702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123184645_123185831_123185991_123253302
transcript_146697.nic	chrX	+	930	2	ISM	ENSG00000125675.20	ENST00000611689.4	936	4	-96	18364	50	-18364	5prime_fragment	FALSE	canonical	3	31	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAAAATAGCACGG	259	False	NA	NA	False	AAAAAG	-4	NA	123184202	123186319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_123184645_123185831
transcript_146698.known	chrX	-	5600	39	FSM	ENSG00000125676.20	ENST00000245838.13	5600	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	78.322160359148	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATATTATTGTGTA	-10	True	NA	-9	True	AATAAA	-17	NA	123733052	123600568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_123601339_123610917_123610964_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_146705.nic	chrX	-	2951	23	ISM	ENSG00000125676.20	ENST00000355725.8	4930	39	-160	17495	-160	-4180	5prime_fragment	FALSE	canonical	0	0	junction_2	71.6452030771561	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTTTGTTCTAGTAG	NA	False	NA	-1	True	AATAAA	-43	NA	123733216	123627692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_146714.known	chrX	-	876	10	FSM	ENSG00000125676.20	ENST00000433883.1	876	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	105.793066122058	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTGATAATTGCATTATG	5	True	NA	-108	True	NA	NA	NA	123733037	123668307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696836_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_146718.nic	chrX	-	732	3	ISM	ENSG00000125676.20	ENST00000433883.1	876	10	-11	38066	4	-8648	5prime_fragment	FALSE	canonical	3	338	junction_1	20	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAATTAAGGTGTCCTT	-6	True	NA	NA	False	ATTAAA	-7	NA	123733048	123706373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_123706950_123712849_123712909_123732951
transcript_146720.known	chrX	-	689	3	FSM	ENSG00000125676.20	ENST00000459945.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	23	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCAGCTACTACTCCA	NA	False	NA	NA	False	AAAAAG	-31	NA	123623625	123621522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_123621588_123622757_123622861_123623104
transcript_146721.known	chrX	+	8415	7	FSM	ENSG00000101966.13	ENST00000434753.7	8415	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.87909372276815	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTACCTTGTATTTGTTT	-24	True	NA	NA	False	AATAAA	-38	NA	123859811	123913976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123859906_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_146722.known	chrX	+	8558	7	FSM	ENSG00000101966.13	ENST00000371199.8	8558	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.02305952453618	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATACTACCTTGTATTT	34	True	NA	NA	False	AATAAA	-34	NA	123860052	123913972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123860294_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_146724.known	chrX	+	8584	7	FSM	ENSG00000101966.13	ENST00000355640.3	8584	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.21749194749951	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATATCATACTACCT	3	True	NA	NA	False	AATAAA	-27	NA	123860271	123913965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123860546_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_146725.known	chrX	+	533	6	FSM	ENSG00000101966.13	ENST00000497640.1	533	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.08604962188118	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCAGCTAAGGCGCCT	22	True	NA	NA	False	NA	NA	NA	123860194	123906998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123860294_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_14673.known	chr1	-	1660	5	FSM	ENSG00000054267.22	ENST00000444620.2	1660	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	56.4374653931234	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTAATTTTTAAAATATAA	6459	False	NA	65	True	AAAAAG	-27	NA	235213916	235177786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235213876
transcript_146732.known	chrX	+	4281	34	FSM	ENSG00000101972.20	ENST00000371144.7	4281	34	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	74.3397136201122	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAATCTGAAGAGGCAT	-7	True	NA	NA	False	TTTAAA	-17	NA	123961738	124100902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_146738.known	chrX	+	5991	33	FSM	ENSG00000101972.20	ENST00000371157.7	5991	33	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	59.3044893826555	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	-28	True	NA	NA	False	AATAAA	-22	NA	123961717	124102656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_14674.known	chr1	-	1847	11	FSM	ENSG00000188739.15	ENST00000408888.8	1847	11	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_7	39.7292083988594	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTGTGCTCAAGTTC	6	True	NA	0	True	ATTAAA	-19	NA	235161250	235131182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_14675.known	chr1	-	1273	10	FSM	ENSG00000188739.15	ENST00000447801.5	1273	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	235.194482172615	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTATTATCTGCTGATA	36	True	NA	32	True	AATAAA	-1	NA	235161220	235131666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_146752.known	chrX	+	2089	17	FSM	ENSG00000101972.20	ENST00000455404.5	2089	17	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	64.1133944176254	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGCAAAGGAGAAGAAGAC	NA	False	NA	-37	True	AATAAA	-32	NA	123960518	124062907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123960867_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901
transcript_146753.known	chrX	+	5218	35	FSM	ENSG00000101972.20	ENST00000218089.13	5218	35	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	85.2522615353154	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGCTGATTTTATAATT	NA	False	NA	7	True	AATAAA	-19	NA	123960518	124101498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123960867_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
transcript_146756.known	chrX	+	6179	35	FSM	ENSG00000101972.20	ENST00000371145.8	6179	35	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	83.4678988498471	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	-40	True	NA	NA	False	AATAAA	-22	NA	123961705	124102656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
transcript_146757.nic	chrX	+	1260	9	NIC	ENSG00000101972.20	novel	6143	38	NA	NA	5	2181	intron_retention	FALSE	canonical	3	27	junction_1	100.666451089725	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACTTTTATATTGAATA	7	True	NA	83	True	NA	NA	NA	123961827	124047505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_123962107_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353
transcript_14676.known	chr1	-	881	5	FSM	ENSG00000188739.15	ENST00000476261.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_1	40.5115724207294	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGCCTGCAATGTACT	24	True	NA	NA	False	AATAAA	-15	NA	235161232	235152487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_146765.nic	chrX	+	1087	8	ISM	ENSG00000101972.20	ENST00000691383.1	2400	18	-32	16043	-20	2181	5prime_fragment	FALSE	canonical	3	89	junction_1	72.126589396416	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACTTTTATATTGAATA	368	False	NA	83	True	NA	NA	NA	123961685	124047505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353
transcript_14677.nnic	chr1	+	1927	17	FSM	ENSG00000284770.2	ENST00000406207.5	2071	17	18	126	0	0	multi-exon	FALSE	canonical	3	12	junction_1	50.0947539668576	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	-1	True	NA	8	True	AATAAA	-2	NA	235367430	235448952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367553_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_146774.nic	chrX	+	388	3	ISM	ENSG00000101972.20	ENST00000458176.5	845	8	-53	19293	-20	0	5prime_fragment	FALSE	canonical	3	89	junction_1	110	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATGTATCAAATATTT	368	False	NA	NA	False	NA	NA	NA	123961685	124025915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_123961857_124022530_124022672_124025839
transcript_146777.known	chrX	-	326	2	FSM	ENSG00000232412.1	ENST00000426367.1	326	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCGTTTCTGTTCCATT	1865	False	NA	2	True	CATAAA	-19	NA	123961341	123959232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_123959406_123961188
transcript_146780.known	chrX	-	84	1	FSM	ENSG00000226532.1	ENST00000412004.1	84	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAATGTGTTC	NA	False	NA	-48	True	NA	NA	NA	124326258	124326174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_124326200_124326300
transcript_146785.nic	chrX	+	779	2	NIC	ENSG00000237208.1	novel	639	3	NA	NA	-31	0	intron_retention	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCTCTTGTTGCTTAG	NA	False	NA	NA	False	AATAAA	-32	NA	126109730	126115562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_126110149_126115201
transcript_146791.nnic	chrX	+	808	7	Antisense	novelGene_ENSG00000225689.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	3.3166247903554	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTGTCTGACAGTG	NA	False	NA	NA	False	AATAGA	-13	NA	129091304	129322948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_129091448_129150138_129150256_129296263_129296409_129297316_129297398_129300302_129300358_129319450_129319493_129322723
transcript_146802.known	chrX	-	4099	25	FSM	ENSG00000102038.16	ENST00000371122.8	4099	25	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	132.898352970314	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTATTTCCTGTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	129523500	129446504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_129447302_129448301_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_146804.known	chrX	-	3989	25	FSM	ENSG00000102038.16	ENST00000371121.5	3989	25	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_13	76.0264482488386	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	-1	True	NA	NA	False	AATAAA	-18	NA	129523490	129446505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_146810.known	chrX	-	3948	24	FSM	ENSG00000102038.16	ENST00000371123.5	3948	24	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_12	117.696447211462	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	4	True	NA	NA	False	AATAAA	-18	NA	129523485	129446505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_146820.nic	chrX	-	1451	10	ISM	ENSG00000102038.16	ENST00000371122.8	4099	25	-89	53272	-89	8278	5prime_fragment	FALSE	canonical	3	472	junction_5	54.4544208546678	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATAAAGATTTACTTGG	NA	False	NA	NA	False	TATAAA	-34	NA	129523589	129499776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_146824.nic	chrX	-	462	2	ISM	ENSG00000102038.16	ENST00000478420.1	561	6	-343	10324	-89	-10324	5prime_fragment	FALSE	canonical	3	502	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATATGAAGAGAAAATGGT	NA	False	NA	-12	True	NA	NA	NA	129523589	129518378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_129518448_129523196
transcript_146825.known	chrX	+	912	6	FSM	ENSG00000122121.12	ENST00000371105.7	912	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACATTTAAAAGAATCAGT	9	True	NA	NA	False	ATTAAA	-1	NA	129738973	129746863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_129739263_129742107_129742182_129743960_129744072_129745202_129745267_129746235_129746341_129746594
transcript_146827.known	chrX	-	4571	11	FSM	ENSG00000188706.13	ENST00000357166.11	4571	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.6872395308647	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTCATTTCTTTAC	378	False	129843910	-19	True	AATACA	-21	NA	129843886	129803287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
transcript_146839.known	chrX	+	2507	15	FSM	ENSG00000156697.13	ENST00000394422.8	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	22.582275874532	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	-9	True	NA	9	True	AATAAA	-17	NA	129906163	129929752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
transcript_14684.known	chr1	+	2895	4	FSM	ENSG00000152904.11	ENST00000282841.9	2895	4	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	28.6395220320141	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAAGTAGATTTGTTC	-1	True	NA	8	True	ATTAAA	-24	NA	235328569	235344532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235328779_235335241_235335335_235341707_235341779_235342010
transcript_146849.known	chrX	-	2107	16	FSM	ENSG00000156709.15	ENST00000675240.1	2107	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	133.736058463428	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGAAATAAATTCTGA	7555	False	NA	NA	False	NA	NA	NA	130165825	130129396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130129629_130129969_130130103_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_146852.known	chrX	-	2192	16	FSM	ENSG00000156709.15	ENST00000319908.8	2192	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	180.010296001831	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTAAATTAAATTCTGTT	7550	False	NA	NA	False	AATAAA	-9	NA	130165830	130129374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130129629_130129969_130130167_130131674_130131797_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139869_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_146854.known	chrX	-	2154	16	FSM	ENSG00000156709.15	ENST00000675092.1	2154	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	133.975851887155	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCTCTTGTCAAGGG	-7	True	NA	NA	False	AATAAA	-22	NA	130165746	130129361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130129629_130129969_130130194_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_146865.known	chrX	+	952	1	FSM	ENSG00000286650.1	ENST00000664768.1	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCAGTTTACAATGG	NA	False	NA	NA	False	ATTAAA	-19	NA	130165953	130166905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130166000_130166900
transcript_146866.nnic	chrX	+	743	2	NNC	ENSG00000134594.5	novel	945	2	NA	NA	-650	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	5332	False	NA	4	True	AATAAA	-15	NA	130171311	130184870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_130171469_130184284
transcript_146867.known	chrX	+	945	2	FSM	ENSG00000134594.5	ENST00000257017.5	945	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	18	True	NA	4	True	AATAAA	-15	NA	130171961	130184870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130172321_130184284
transcript_146868.known	chrX	-	4638	19	FSM	ENSG00000056277.16	ENST00000370978.9	4638	19	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_7	18.773503787105	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAACTATAGGAGCAT	0	True	NA	33	True	AATAAA	-20	NA	130268899	130202706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
transcript_14687.known	chr1	+	868	4	FSM	ENSG00000152904.11	ENST00000497327.1	868	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	213.215071387242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATATCTTGCGCCAGAG	23	False	NA	NA	False	NA	NA	NA	235329028	235342559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235329184_235335241_235335335_235341707_235341779_235342010
transcript_146871.nic	chrX	-	1659	10	ISM	ENSG00000056277.16	ENST00000447817.1	1970	14	-21	13431	-5	-13431	5prime_fragment	FALSE	canonical	3	86	junction_1	16.6984881403329	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGTAGAAGAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	130268904	130228623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
transcript_146876.known	chrX	+	1615	11	FSM	ENSG00000102078.16	ENST00000545805.6	1615	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32.2411228092323	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	11	True	NA	8	True	ATTAAA	-17	NA	130339918	130373357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130339977_130340106_130340354_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_14688.known	chr1	+	1407	3	FSM	ENSG00000152904.11	ENST00000391855.2	1407	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	221	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCAGTTTCTATTAGC	0	True	NA	58	True	NA	NA	NA	235328570	235343138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235328779_235341707_235341779_235342010
transcript_146889.nnic	chrX	+	1068	7	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	28.9985631827969	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	-17	True	NA	8	True	ATTAAA	-17	NA	130339890	130373357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_130339977_130349250_130349346_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_14689.known	chr1	+	470	2	FSM	ENSG00000152904.11	ENST00000482013.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTCTGTAGTTTTTTCA	2	True	NA	NA	False	NA	NA	NA	235328572	235329984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235328779_235329720
transcript_146894.known	chrX	+	1403	10	FSM	ENSG00000102078.16	ENST00000543953.5	1403	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	21.6076118275225	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTGTCTTCATTTA	-20	True	NA	12	True	ATTAAA	-21	NA	130339887	130373361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_146895.known	chrX	+	922	3	FSM	ENSG00000102078.16	ENST00000465988.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTACAGACCTCGGTTCT	NA	False	NA	-35	True	NA	NA	NA	130365241	130373314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130365677_130371563_130371645_130372908
transcript_146896.known	chrX	+	1823	6	FSM	ENSG00000134597.17	ENST00000305536.11	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	33.38622470421	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTTTTGTGTCTGG	-5	True	NA	14	True	CATAAA	-16	NA	130401986	130413656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
transcript_146897.known	chrX	+	729	4	FSM	ENSG00000134597.17	ENST00000469953.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	11.6714276000077	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	9	True	NA	2	True	AAAAAG	-10	NA	130402000	130411524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130402371_130403801_130403854_130409256_130409387_130411347
transcript_1469.known	chr1	+	584	3	FSM	ENSG00000175279.22	ENST00000462462.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	141	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	370	False	NA	NA	False	AATAGA	-5	NA	10431122	10442502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10431402_10440346_10440414_10442264
transcript_146902.known	chrX	-	5126	15	FSM	ENSG00000165675.19	ENST00000394363.6	5126	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	8.8456146173787	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	-7	True	NA	74	True	AATAAA	-21	NA	130903209	130622324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_146903.known	chrX	-	3963	14	FSM	ENSG00000165675.19	ENST00000370935.5	3963	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_12	14.0796550522565	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAACTCCTTACCAT	8	True	NA	NA	False	AATAAA	-7	NA	130903234	130623368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130901683_130901732_130903048
transcript_146906.nic	chrX	-	385	3	ISM	ENSG00000165675.19	ENST00000492263.1	819	7	-69	103921	-27	-103921	5prime_fragment	FALSE	canonical	3	67	junction_1	2.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACAAATACTCCTTCAG	NA	False	NA	NA	False	AAGAAA	-6	NA	130903261	130783566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_130783691_130901683_130901732_130903048
transcript_146909.known	chrX	+	2447	9	FSM	ENSG00000147256.12	ENST00000370921.1	2447	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.86664806538351	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCATGGCTTACTGTGTT	0	True	NA	NA	False	AATAAA	-23	NA	131083709	131089883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_131083970_131084214_131084408_131084625_131084682_131084913_131085065_131085587_131085737_131085912_131086090_131086328_131086427_131086558_131086666_131088627
transcript_146918.known	chrX	-	1786	5	FSM	ENSG00000147255.19	ENST00000370900.5	1786	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.3738727353048	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	357	False	NA	0	True	AATAAA	-14	NA	131289060	131284165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289021
transcript_146921.nnic	chrX	+	642	4	Antisense	novelGene_ENSG00000147255.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCTTTCCATGAATTGT	NA	False	NA	NA	False	AATAAA	-20	NA	131251024	131283773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_131251318_131251462_131251593_131273248_131273318_131283623
transcript_146931.known	chrX	-	1820	5	FSM	ENSG00000147255.19	ENST00000370901.4	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	15.5402702679201	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	4	True	NA	0	True	AATAAA	-14	NA	131289286	131284165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_146932.known	chrX	-	5413	27	FSM	ENSG00000147255.19	ENST00000370904.6	5413	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	39.0894135095515	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTATGGCTGTGGTCT	NA	False	NA	-7	True	AATAAA	-24	NA	131578899	131273510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286604_131286742_131289213_131289276_131299650_131299771_131304084_131304124_131364748_131364927_131368367_131368450_131368951_131369053_131389016_131389149_131399573_131399705_131578667
transcript_146933.known	chrX	-	4461	20	FSM	ENSG00000147255.19	ENST00000361420.8	4461	20	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_14	36.1070277303955	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTGTGGTCTTCTAT	-16	True	NA	-2	True	AATAAA	-29	NA	131289306	131273505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_146939.nnic	chrX	-	807	2	NIC	ENSG00000147255.19	novel	5413	27	NA	NA	-244	-102674	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCAGCTTATTAGCAA	NA	False	NA	NA	False	NA	NA	NA	131579143	131388817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_131389149_131578667
transcript_14694.known	chr1	+	1908	17	FSM	ENSG00000284770.2	ENST00000646186.1	1908	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	51.9906466948623	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTATACATAATAGCAA	-2	True	NA	-20	True	NA	NA	NA	235367429	235448924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419416_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_14695.known	chr1	+	5374	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	25.7602376493308	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGAAGATCCTCATTCT	-5	True	NA	NA	False	ATTAAA	-19	NA	235367426	235452443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_146954.known	chrX	-	1805	4	FSM	ENSG00000213468.7	ENST00000650184.1	1805	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	65.0589476295664	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAATATATGGGAACTT	-2	True	NA	NA	False	AATAAA	-28	NA	131830604	131795049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131796332_131804971_131805038_131825221_131825366_131830291
transcript_146955.known	chrX	-	1240	3	FSM	ENSG00000213468.7	ENST00000668308.1	1240	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	101.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCGCTGTCTTGGCCTT	NA	False	NA	-12	True	NA	NA	NA	131830673	131793752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131794467_131825221_131825366_131830291
transcript_146957.nnic	chrX	-	1348	3	NNC	ENSG00000213468.7	novel	2173	2	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	118	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTGTTTGTTTGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	131830670	131823765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_131824591_131825221_131825366_131830291
transcript_146958.known	chrX	-	2173	2	FSM	ENSG00000213468.7	ENST00000657242.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830862	131823763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131825366_131830291
transcript_14696.known	chr1	+	1897	17	FSM	ENSG00000284770.2	ENST00000646286.1	1897	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.1074518683529	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	-2	True	NA	-12	True	NA	NA	NA	235367429	235448932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235413875_235413998_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_146960.known	chrX	-	699	1	FSM	ENSG00000213468.7	ENST00000658060.1	699	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAGCACTCAAATATACA	-20	True	NA	NA	False	AATAGA	-31	NA	131830622	131829923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131829900_131830600
transcript_146961.known	chrX	-	2926	13	FSM	ENSG00000213468.7	ENST00000427391.2	2926	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	65.950107404512	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTTAAGCTTTTTAAT	-1	True	NA	NA	False	ATTAAA	-16	NA	131830643	131702651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131703519_131709497_131709557_131711650_131711721_131749305_131749459_131755597_131755747_131756610_131756710_131768548_131768697_131783886_131784040_131794323_131794467_131795808_131796332_131804971_131805038_131825221_131825366_131830291
transcript_146963.known	chrX	+	1835	13	FSM	ENSG00000134602.16	ENST00000481105.5	1835	13	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_4	182.498915521892	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATCTTTAGTTGACTC	-1	True	NA	NA	False	NA	NA	NA	132023301	132074461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132055455_132055522_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_146966.known	chrX	+	3251	12	FSM	ENSG00000134602.16	ENST00000394334.7	3251	12	0	0	0	0	multi-exon	TRUE	canonical	3	415	junction_7	40.5067079436203	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	-1	True	NA	17	True	AATAAA	-19	NA	132023301	132075943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_146968.known	chrX	+	3179	11	FSM	ENSG00000134602.16	ENST00000354719.10	3179	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	147.975673676453	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	-1	True	NA	17	True	AATAAA	-19	NA	132023301	132075943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072965_132073094_132074134
transcript_14697.known	chr1	+	2071	17	FSM	ENSG00000284770.2	ENST00000406207.5	2071	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	50.0947539668576	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAATATCTGTCATAAG	-19	True	NA	NA	False	AATAAA	-10	NA	235367412	235449078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367553_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_146972.known	chrX	+	3017	11	FSM	ENSG00000134602.16	ENST00000394335.6	3017	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	141.614264818203	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	2	True	NA	17	True	AATAAA	-19	NA	132023304	132075943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132023408_132023507_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_146979.known	chrX	+	3771	3	FSM	ENSG00000232160.7	ENST00000441399.3	3771	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGCAAATAATGTATGAA	-36	True	NA	NA	False	CATAAA	-27	NA	132218208	132432862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132218838_132239619_132239712_132429812
transcript_146986.known	chrX	-	11263	8	FSM	ENSG00000076770.15	ENST00000394311.6	11263	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	4.89897948556636	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTCAGTCCTTCTC	-2	True	NA	NA	False	AATAAA	-19	NA	132413608	132369316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_132379678_132382177_132382273_132384662_132384699_132386660_132386812_132390846_132391084_132392142_132392335_132406227_132406393_132413582
transcript_146993.known	chrX	-	2336	9	FSM	ENSG00000147257.16	ENST00000394299.7	2336	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	272.926272095597	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	-7	True	NA	-28	True	AATAAA	-16	NA	133985594	133535744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133704204_133704274_133753481_133754177_133953049_133953212_133985274
transcript_146994.known	chrX	-	2267	8	FSM	ENSG00000147257.16	ENST00000370818.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_6	43.5819659389298	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	-7	True	NA	-28	True	AATAAA	-16	NA	133985594	133535744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133753481_133754177_133953049_133953212_133985274
transcript_146996.nnic	chrX	-	953	3	NNC	ENSG00000147257.16	novel	1188	6	NA	NA	22128	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	350	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	6492	False	NA	-28	True	AATAAA	-16	NA	133639958	133535744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_133536294_133596439_133596600_133639714
transcript_146998.nic	chrX	-	425	2	ISM	ENSG00000147257.16	ENST00000692630.1	600	4	1453	199116	-30	-199116	internal_fragment	FALSE	canonical	3	586	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGGAAGAAAAATACCAAC	-2	True	NA	NA	False	AAGAAA	-1	NA	133985647	133953159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_133953212_133985274
transcript_14700.known	chr1	+	1779	16	FSM	ENSG00000284770.2	ENST00000643142.1	1779	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	52.6204860824713	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATAAAGGCTTTGAA	-2	True	NA	-4	True	NA	NA	NA	235367429	235448940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_147000.nnic	chrX	+	1644	3	NNC	ENSG00000203952.9	novel	1790	3	NA	NA	175	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	3.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGCCTGTGGGTCTTAT	-3	True	NA	14	True	AATAAA	-27	NA	134237221	134246207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_134237344_134238749_134238841_134244776
transcript_147001.known	chrX	+	1299	2	FSM	ENSG00000203952.9	ENST00000370809.4	1299	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTAAAAAAATCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	134237046	134245778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134237344_134244776
transcript_147003.known	chrX	+	4434	11	FSM	ENSG00000156531.18	ENST00000625464.2	4434	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	99.0668965901325	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTCTTTTTTGTG	-15	True	NA	18	True	AATAAA	-18	NA	134373311	134428791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
transcript_147004.known	chrX	+	4759	10	FSM	ENSG00000156531.18	ENST00000332070.7	4759	10	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	52.0536285662544	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	-15	True	NA	16	True	AATAAA	-16	NA	134373311	134428789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
transcript_147007.known	chrX	+	1150	8	FSM	ENSG00000156531.18	ENST00000370800.4	1150	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	108.567293154325	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTCTATGTAACTT	-7	True	NA	NA	False	AATAAA	-21	NA	134373372	134415292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015
transcript_147011.nic	chrX	+	863	6	ISM	ENSG00000156531.18	ENST00000691812.1	3892	11	-191	15211	-152	-1735	5prime_fragment	FALSE	canonical	3	240	junction_5	64.5259637665336	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCGCAAAGGAAGGCCAAGAA	NA	False	NA	NA	False	AGTAAA	-9	NA	134373135	134413557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490
transcript_147017.nic	chrX	+	461	3	ISM	ENSG00000156531.18	ENST00000687834.1	5616	5	-73	12229	-20	-12229	5prime_fragment	FALSE	canonical	3	327	junction_2	35	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATTAAAAGAGGCACGA	NA	False	NA	NA	False	AATGAA	-36	NA	134373267	134378081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_134373468_134377571_134377756_134378004
transcript_14702.known	chr1	+	1801	16	FSM	ENSG00000284770.2	ENST00000647418.1	1801	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	53.3614925661651	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGAACCTACTAATGA	-9	True	NA	7	True	AATAAA	-1	NA	235367422	235448951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_147021.known	chrX	+	1395	9	FSM	ENSG00000165704.15	ENST00000298556.8	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_7	27.1750689971525	1983	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTATGAATTCAATTT	7	True	NA	23	True	AATAAA	-16	NA	134460164	134500668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134460339_134473358_134473466_134475180_134475365_134486464_134486531_134490187_134490206_134493507_134493591_134498389_134498437_134498607_134498685_134500029
transcript_147022.known	chrX	-	991	2	FSM	ENSG00000223749.11	ENST00000666697.1	991	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCTGCAGTGCAAATTG	4599	False	NA	NA	False	ATTAAA	-15	NA	134545044	134543339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134544000_134544713
transcript_147024.known	chrX	-	333	3	FSM	ENSG00000170965.10	ENST00000473897.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTGCCCCCCAAACC	NA	False	NA	NA	False	NA	NA	NA	134764263	134566509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134566741_134602050_134602123_134764233
transcript_147030.known	chrX	-	1078	11	FSM	ENSG00000156504.17	ENST00000493333.5	1078	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	54.3975183257472	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCAGAGAACTTTGATCC	3	True	NA	NA	False	CATAAA	-14	NA	134797187	134772078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_147032.known	chrX	-	1059	11	FSM	ENSG00000156504.17	ENST00000611027.2	1059	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	54.0133316876491	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATAAAATGTTTAGTGG	3	True	NA	NA	False	NA	NA	NA	134797187	134772100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_147036.nic	chrX	-	1547	10	NIC	ENSG00000156504.17	novel	1078	11	NA	NA	-39	-63	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	51.3840538265941	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTCAAGTACATTATT	4	False	NA	-17	True	ATTAAA	-17	NA	134797271	134771636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_147038.nic	chrX	-	1530	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	-19	-63	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	50.841802573167	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTCAAGTACATTATT	-2	True	NA	-17	True	ATTAAA	-17	NA	134797251	134771636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_14704.known	chr1	+	1683	15	FSM	ENSG00000284770.2	ENST00000366601.8	1683	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.3242759573416	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	-2	True	NA	0	True	NA	NA	NA	235367429	235448944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_147068.nic	chrX	+	564	4	ISM	ENSG00000156500.16	ENST00000645433.2	1592	11	0	25396	0	6446	5prime_fragment	FALSE	canonical	2	7	junction_1	15.9234278833282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAAGCACTTTTTTTGG	2	True	NA	NA	False	AAAACA	-4	NA	134807236	134829436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_134807342_134807539_134807709_134814770_134814850_134829225
transcript_147070.known	chrX	-	2706	11	FSM	ENSG00000156504.17	ENST00000298090.10	2706	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	60.3125194300487	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTTTTAAAAGTCTG	43	False	134797249	-18	True	AATAAA	-24	NA	134797232	134769566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134771355_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_147071.known	chrX	-	4246	9	FSM	ENSG00000156504.17	ENST00000370790.5	4246	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	41.5314263540274	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTTTTAAAAGTCTGT	-1	True	NA	-17	True	AATAAA	-25	NA	134797134	134769565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107
transcript_147072.known	chrX	+	1344	7	FSM	ENSG00000156500.16	ENST00000370785.4	1344	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	14.9823970786461	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTTTGACAATTATGTA	-6	True	NA	14	True	AGTAAA	-2	NA	134807193	134854591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134807709_134814770_134814850_134829225_134829283_134845204_134845249_134845346_134845402_134847382_134847476_134854090
transcript_147073.known	chrX	+	665	3	FSM	ENSG00000156500.16	ENST00000482240.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATTCACTACATA	17	False	NA	NA	False	NA	NA	NA	134807216	134809557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134807342_134807539_134807709_134809186
transcript_14708.known	chr1	+	1598	14	FSM	ENSG00000284770.2	ENST00000643524.1	1598	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.4462794282566	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	-2	True	NA	0	True	NA	NA	NA	235367429	235448944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_147087.known	chrX	-	2348	6	FSM	ENSG00000101928.13	ENST00000370783.8	2348	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	44.7910705386687	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCACATTGATTTAAACA	-9	True	NA	-23	True	AATAAA	-18	NA	134915257	134887631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_147088.known	chrX	-	773	5	FSM	ENSG00000101928.13	ENST00000370779.8	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	47.9133332173832	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAATTTGAAGGACT	-12	True	NA	97	True	AATATA	-12	NA	134915227	134889014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134889193_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_147089.known	chrX	-	784	5	FSM	ENSG00000101928.13	ENST00000370777.1	784	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77.9647356180985	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATGAATGTGGACTG	NA	False	NA	-11	True	AGTAAA	-9	NA	134899534	134889122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134889193_134891478_134891641_134896813_134897035_134899089_134899166_134899279
transcript_147090.known	chrX	-	924	5	FSM	ENSG00000101928.13	ENST00000491609.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	58.5790064784305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTAGGAAATTATTTGA	85	False	NA	NA	False	NA	NA	NA	134915231	134888953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899279_134899535_134915181
transcript_147091.known	chrX	+	1483	1	FSM	ENSG00000184785.6	ENST00000330288.6	1483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGCATTTAGAATGAA	-10	True	NA	NA	False	ATTAAA	-21	NA	134990990	134992473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134991000_134992500
transcript_147092.known	chrX	-	2030	1	FSM	ENSG00000212747.5	ENST00000391440.3	2030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAAGTTTTAGTCTT	-33	True	NA	-14	True	ATTAAA	-20	NA	135022542	135020512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135020500_135022500
transcript_147093.known	chrX	+	616	2	FSM	ENSG00000134590.14	ENST00000464369.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	26	False	NA	NA	False	AATAAA	-24	NA	135032381	135033546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135032576_135033124
transcript_147094.known	chrX	+	1192	1	FSM	ENSG00000134590.14	ENST00000257013.9	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	-1	True	NA	NA	False	AATAAA	-24	NA	135032354	135033546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135032400_135033500
transcript_147095.known	chrX	-	536	2	FSM	ENSG00000203950.7	ENST00000522309.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTCTGATGGGTGCC	15	True	NA	NA	False	NA	NA	NA	135052141	135051057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135051369_135051916
transcript_147096.known	chrX	-	762	2	FSM	ENSG00000203950.7	ENST00000518153.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	66	False	NA	-68	True	AATAAA	-24	NA	135052090	135050931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135051520_135051916
transcript_147097.known	chrX	-	817	2	FSM	ENSG00000203950.7	ENST00000520964.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATGGAGTCTCAAT	-40	True	NA	-76	True	AATAAA	-16	NA	135052196	135050939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135051477_135051916
transcript_147098.known	chrX	-	1204	1	FSM	ENSG00000203950.7	ENST00000370775.3	1204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	21	True	NA	-68	True	AATAAA	-24	NA	135052135	135050931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135050900_135052100
transcript_147099.known	chrX	-	1441	6	FSM	ENSG00000169551.13	ENST00000276241.11	1441	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.16619037896906	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGACCTCTCTGTTGATT	NA	False	NA	NA	False	AATAAA	-17	NA	135171398	135156539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135157029_135157315_135157504_135158198_135158312_135160410_135160556_135169593_135169779_135171077
transcript_147110.known	chrX	+	4034	5	FSM	ENSG00000173275.13	ENST00000339249.5	4034	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	7.95298686029343	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTAATATTCTTTGTTA	-1	True	NA	NA	False	AATATA	-28	NA	135344795	135363413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135344836_135347018_135347473_135349109_135349315_135359891_135360006_135360192
transcript_147118.known	chrX	+	4755	17	FSM	ENSG00000198689.13	ENST00000370701.6	4755	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	43.1204707766508	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGTATTTGAGTCACA	NA	False	NA	23	True	ATTAAA	-26	NA	135985134	136047130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135985478_135985602_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_147121.known	chrX	+	4631	16	FSM	ENSG00000198689.13	ENST00000370698.7	4631	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	42.6796855137846	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATGGGTTGGCAAATTTT	-20	True	NA	NA	False	AATAAA	-26	NA	135985426	136047269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135985828_135994785_135994890_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_147122.known	chrX	+	4711	16	FSM	ENSG00000198689.13	ENST00000370695.8	4711	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	34.4140798059296	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTAACTTATGGGTTGG	-12	True	NA	NA	False	AATAAA	-18	NA	135985434	136047261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_147123.known	chrX	-	5145	4	FSM	ENSG00000169446.6	ENST00000305963.3	5145	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	7.40870359029762	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTTTTTTTTTCA	19	True	NA	1	True	AATAAA	-21	NA	135973988	135960587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596
transcript_147124.known	chrX	-	972	3	FSM	ENSG00000169446.6	ENST00000680510.1	972	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	69.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGGTTTTTGTGATT	-6	True	NA	NA	False	NA	NA	NA	135974013	135964732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135965184_135967389_135967494_135973596
transcript_147126.nic	chrX	+	506	2	ISM	ENSG00000198689.13	ENST00000636347.1	4867	18	-54	72371	-54	-23987	5prime_fragment	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGCAGCCTTCTTGCCTT	NA	False	NA	NA	False	AAGAAA	-27	NA	135973786	135974896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_135974033_135974636
transcript_147127.known	chrX	+	2568	8	FSM	ENSG00000022267.19	ENST00000394155.8	2568	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	74.2422950032321	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCCTGTCTTTTCAT	-2	True	NA	18	True	AATAAA	-16	NA	136147532	136211354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209242_136209443_136209870
transcript_147128.known	chrX	+	2441	7	FSM	ENSG00000022267.19	ENST00000651929.2	2441	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_6	22.4276614920058	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTTTTCATTCTGC	15	False	NA	23	True	AATAAA	-21	NA	136147464	136211359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209870
transcript_147130.known	chrX	-	4385	19	FSM	ENSG00000129680.16	ENST00000316077.14	4385	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	17.3348468000224	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGTTTTTTCATTATAA	-13	True	NA	NA	False	AATAAA	-15	NA	136251400	136216813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136218494_136219397_136219496_136219592_136219672_136220764_136220964_136222392_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_147134.nic	chrX	-	1774	10	ISM	ENSG00000129680.16	ENST00000316077.14	4385	19	-42	13631	-42	-60	5prime_fragment	FALSE	canonical	3	107	junction_4	12.5648932828686	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTCTAAAACCACTAAC	4979	False	NA	NA	False	AAAAAG	-11	NA	136251442	136230444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_147136.nic	chrX	-	500	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-60	25006	-42	-14248	5prime_fragment	FALSE	canonical	3	137	junction_2	7.31816613336672	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACATAATTTTGCAGCCT	4979	False	NA	-2	True	AAAAAG	-25	NA	136251442	136244632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_147137.nic	chrX	-	435	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-60	25071	-42	-14313	5prime_fragment	FALSE	canonical	3	137	junction_2	7.31816613336672	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGAACAACGGAG	4979	False	NA	-67	True	AAAACA	-38	NA	136251442	136244697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_147138.nic	chrX	-	374	4	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-60	25132	-42	-14374	5prime_fragment	FALSE	canonical	3	137	junction_2	7.31816613336672	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCAAGCTCCAATATGAAA	4979	False	NA	NA	False	AATAAA	-30	NA	136251442	136244758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_136244796_136246064_136246149_136246242_136246342_136251288
transcript_147139.nic	chrX	-	337	3	ISM	ENSG00000129680.16	ENST00000370660.3	2432	17	-60	26438	-42	-15680	5prime_fragment	FALSE	canonical	3	137	junction_1	8	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTAGACCTTTTTT	4979	False	NA	65	True	NA	NA	NA	136251442	136246064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_136246149_136246242_136246342_136251288
transcript_147140.known	chrX	+	3019	10	FSM	ENSG00000102241.12	ENST00000535601.5	3019	10	0	0	0	0	multi-exon	TRUE	canonical	3	292	junction_1	161.590551001101	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	147	False	NA	38	True	AATAAA	-27	NA	136497078	136512342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_147142.known	chrX	+	2694	9	FSM	ENSG00000102241.12	ENST00000218364.5	2694	9	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_4	82.7673697781922	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	-3	True	NA	42	True	AATAAA	-31	NA	136497591	136512346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_147148.known	chrX	+	1014	6	FSM	ENSG00000102241.12	ENST00000448450.5	1014	6	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	214.990790500431	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTTTTTTCCCTT	-10	True	NA	NA	False	NA	NA	NA	136497220	136502941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_147149.known	chrX	+	885	6	FSM	ENSG00000102241.12	ENST00000425695.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	261.142566426847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGCCTCAAAGAAGAAG	3	True	NA	NA	False	NA	NA	NA	136497233	136502877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136497440_136497675_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_147151.nnic	chrX	+	1395	6	NNC	ENSG00000102241.12	novel	2694	9	NA	NA	-63	2082	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	316.246359662843	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGTTCTGAGGAATAT	147	False	NA	NA	False	AATAAA	-15	NA	136497528	136505023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504518
transcript_147153.nic	chrX	+	1476	5	ISM	ENSG00000102241.12	ENST00000448450.5	1014	6	308	-586	-63	586	3prime_fragment	FALSE	canonical	3	618	junction_4	106.355535822072	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTGATGTCTCATT	147	False	NA	NA	False	ATTAAA	-14	NA	136497528	136503527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_147156.known	chrX	+	690	3	FSM	ENSG00000233093.7	ENST00000454385.7	693	3	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTTCTTCAAGTGTAA	2	True	NA	NA	False	AATAAA	-15	NA	136639538	136642426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136639805_136640773_136640874_136642102
transcript_14716.known	chr1	+	2478	15	FSM	ENSG00000284770.2	ENST00000472011.6	2478	15	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	26.7920944782339	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	18	True	NA	-12	True	NA	NA	NA	235367449	235448932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_147162.known	chrX	-	2012	9	FSM	ENSG00000147274.14	ENST00000320676.11	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	3712	junction_6	187.424609843531	8403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAAGCTGCAAAGGTGC	2	True	NA	-36	True	AATAAA	-19	NA	136880725	136873460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_147163.known	chrX	-	940	8	FSM	ENSG00000147274.14	ENST00000419968.6	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	1269.69138143158	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAAGGTAAGTGTTGAAA	1347	False	NA	NA	False	GATAAA	-16	NA	136879431	136872274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136872346_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318
transcript_147164.known	chrX	-	1852	8	FSM	ENSG00000147274.14	ENST00000464781.5	1852	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	1398.69395348311	2555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTGCTCTTACTG	2	True	NA	-24	True	AATAAA	-31	NA	136880725	136873448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136879016_136879124_136879318_136879454_136880596
transcript_147165.known	chrX	-	2148	8	FSM	ENSG00000147274.14	ENST00000562646.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	3	3712	junction_5	199.157101355709	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTCGCATTGCTTT	2	True	NA	-10	True	AGTAAA	-16	NA	136880725	136873957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_147166.known	chrX	-	1292	7	FSM	ENSG00000147274.14	ENST00000565438.1	1292	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1505.80082975435	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACATGTTTAATTTTA	14	False	NA	-30	True	NA	NA	NA	136880764	136873977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136880596
transcript_14717.known	chr1	+	2001	4	FSM	ENSG00000284770.2	ENST00000644625.1	2001	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	8.49836585598797	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGACAGAATGAGACTC	-2	True	NA	NA	False	NA	NA	NA	235367429	235416142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432
transcript_147177.nic	chrX	+	1588	3	NIC	ENSG00000234062.9	novel	2222	4	NA	NA	0	893	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATCTGTTTCTTTTTAC	-25	True	NA	NA	False	AATAAA	-23	NA	136909392	136994552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_136909781_136925246_136925380_136993485
transcript_147178.known	chrX	+	646	3	FSM	ENSG00000234062.9	ENST00000431464.6	1253	3	82	525	28	0	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCCTCAGTTTGTA	57	False	NA	10	True	TATAAA	-15	NA	136909474	137021618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136909781_136925246_136925380_137021411
transcript_14718.known	chr1	+	1897	16	FSM	ENSG00000284770.2	ENST00000646821.1	1897	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.1614670430529	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGAACCTACTAATGA	17	True	NA	7	True	AATAAA	-1	NA	235367448	235448951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235432945_235433172_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_147182.known	chrX	+	1144	2	FSM	ENSG00000234062.9	ENST00000650669.2	1146	2	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGGGTTTATTTGCTTT	NA	False	NA	16	True	AATAAA	-16	NA	136909368	137022143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136909781_137021411
transcript_147184.known	chrX	-	78	1	FSM	ENSG00000214748.2	ENST00000442158.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCTGCCCCCAAAGCAA	34	False	NA	NA	False	NA	NA	NA	137325049	137324971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_137325000_137325000
transcript_147185.known	chrX	-	304	3	FSM	ENSG00000224765.2	ENST00000456631.1	304	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTATGGACCTGGAAC	559	False	NA	NA	False	AATAAA	-19	NA	137563925	137556190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_137556305_137561043_137561198_137563889
transcript_147188.nic	chrX	-	375	2	ISM	ENSG00000224765.2	ENST00000456631.1	304	3	-160	4828	-160	-350	5prime_fragment	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGATATTTGTTCATT	399	False	NA	NA	False	NA	NA	NA	137564085	137561018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_137561198_137563889
transcript_147189.nnic	chrX	-	346	2	NNC	ENSG00000224765.2	novel	304	3	NA	NA	-152	-2189	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATGTGGTCGGGTCTA	407	False	NA	NA	False	AATAAA	-21	NA	137564077	137562857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_137563016_137563889
transcript_14719.known	chr1	-	4897	4	FSM	ENSG00000168243.11	ENST00000391854.7	4897	4	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_3	48.4033974932431	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAATCCTACTTTTTTG	-19	True	NA	-11	True	AATAAA	-24	NA	235649784	235547684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235649661
transcript_147193.known	chrX	+	4001	3	FSM	ENSG00000156925.12	ENST00000287538.10	4001	3	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	41.5	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTGGTGCCTGA	-2	True	NA	-33	True	AATAAA	-31	NA	137566126	137572102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_137567752_137568901_137569066_137569890
transcript_147198.known	chrX	+	1968	3	FSM	ENSG00000156925.12	ENST00000370606.3	1968	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	206	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	-1	True	NA	13	True	AATAAA	-14	NA	137566517	137577691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_137567752_137568901_137569066_137577121
transcript_14720.known	chr1	-	4978	4	FSM	ENSG00000168243.11	ENST00000450593.5	4978	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	406.244863215388	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGAATCCTACTTTTT	3	True	NA	-13	True	AATAAA	-22	NA	235650754	235547686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235650548
transcript_147206.nnic	chrX	+	1163	3	NNC	ENSG00000156925.12	novel	1968	3	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_2	12	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	1216	False	NA	13	True	AATAAA	-14	NA	137568699	137577691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_137569066_137570982_137571210_137577121
transcript_147207.nnic	chrX	+	793	3	NNC	ENSG00000283692.2	novel	1835	4	NA	NA	-201	-403690	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	4801	False	NA	13	True	AATAAA	-14	NA	137573550	137577691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_137573623_137573968_137574120_137577121
transcript_147209.known	chrX	+	366	2	FSM	ENSG00000156925.12	ENST00000478471.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTCTGCAGTTCAAAC	55	False	NA	NA	False	AGTAAA	-13	NA	137568804	137569995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_137569066_137569890
transcript_147214.nic	chrX	+	924	2	ISM	ENSG00000156925.12	ENST00000370606.3	1968	3	2194	0	-93	0	3prime_fragment	FALSE	canonical	3	115	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	1228	False	NA	13	True	AATAAA	-14	NA	137568711	137577691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_137569066_137577121
transcript_147217.known	chrX	-	19575	5	FSM	ENSG00000129682.16	ENST00000315930.11	19575	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	48.5148173241949	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGTGATCATTGGC	-20	True	NA	-1	True	AATAAA	-25	NA	138711717	138614726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138710816
transcript_14722.known	chr1	-	1721	3	FSM	ENSG00000168243.11	ENST00000366598.8	1721	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	460.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTTATTTTATTTA	3	True	NA	-15	True	AATAAA	-14	NA	235650754	235550831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235552238_235583739_235583849_235650548
transcript_147224.nnic	chrX	+	961	3	NNC	ENSG00000226031.5	novel	584	4	NA	NA	-294	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	4	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACACTTAACTCCAGGA	NA	False	NA	NA	False	AAAAAG	-28	NA	138711812	138716617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_138711961_138714723_138714810_138715890
transcript_147226.known	chrX	+	849	3	FSM	ENSG00000226031.5	ENST00000438238.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACACTTAACTCCAGGA	NA	False	NA	NA	False	AAAAAG	-28	NA	138712106	138716617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_138712143_138714723_138714810_138715890
transcript_147228.nnic	chrX	+	867	2	NNC	ENSG00000226031.5	novel	584	4	NA	NA	-285	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACACTTAACTCCAGGAA	NA	False	NA	NA	False	AAAAAG	-29	NA	138711821	138716618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_138711961_138715890
transcript_147229.nnic	chrX	+	1005	2	NIC	ENSG00000226031.5	novel	849	3	NA	NA	-254	-12	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAATAGACAC	NA	False	NA	NA	False	AAAAAG	-16	NA	138711852	138716605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_138712143_138715890
transcript_14723.known	chr1	-	1595	3	FSM	ENSG00000168243.11	ENST00000366597.5	1595	3	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_2	49.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTTATTTTATTTA	NA	False	NA	-15	True	AATAAA	-14	NA	235595479	235550831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235552238_235583739_235583849_235595399
transcript_147235.known	chrX	+	1497	1	FSM	ENSG00000230707.3	ENST00000453380.3	1234	1	-263	0	-263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACCTTATTTATT	NA	False	NA	4	True	AATAAA	-16	NA	140091414	140092911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_140091400_140092900
transcript_147238.known	chrX	+	802	3	FSM	ENSG00000203930.13	ENST00000602535.2	802	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGCCAGTGAATCGGG	2	True	NA	16	True	AATAAA	-17	NA	140764561	140772680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_140764699_140768344_140768407_140772077
transcript_147239.known	chrX	+	1354	2	FSM	ENSG00000203930.13	ENST00000669839.1	1354	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGCCTGTAATGAAAA	NA	False	NA	NA	False	AAGAAA	-24	NA	140764497	140773230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_140764699_140772077
transcript_14724.nic	chr1	-	612	4	NIC	ENSG00000143669.15	novel	951	4	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAGACCATGTATAGTGA	-5	True	NA	NA	False	AATAAA	-22	NA	235866933	235828804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_235829037_235830225_235830425_235833577_235833668_235866842
transcript_147243.known	chrX	+	1429	3	FSM	ENSG00000203930.13	ENST00000370535.8	1429	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACCCAGCAACAAAAAC	4	True	NA	NA	False	AATAAA	-15	NA	140709766	140714848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_140709806_140711620_140711657_140713494
transcript_147244.known	chrX	+	466	2	FSM	ENSG00000227234.2	ENST00000449283.2	466	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	-4	True	NA	11	True	AATAAA	-15	NA	141002593	141003706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_141002784_141003430
transcript_147246.nnic	chrX	-	819	3	NNC	ENSG00000182195.9	novel	784	2	NA	NA	-64	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	13.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTTTAATGGTTA	-3	True	NA	-12	True	AATAAA	-23	NA	141177193	141175744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_141175881_141176026_141176409_141176892
transcript_147248.nnic	chrX	-	1230	2	NNC	ENSG00000182195.9	novel	784	2	NA	NA	9	4	intron_retention	FALSE	canonical	2	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTTTAATGGTTA	-14	True	NA	-12	True	AATAAA	-23	NA	141177120	141175744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_141175881_141176026
transcript_147249.nnic	chrX	-	1145	2	NNC	ENSG00000182195.9	novel	784	2	NA	NA	-27	4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTTTAATGGTTA	91	False	NA	-12	True	AATAAA	-23	NA	141177156	141175744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_141176409_141176675
transcript_14725.nnic	chr1	+	973	2	Antisense	novelGene_ENSG00000143669.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTAAGTGTTGAGATTA	42	False	NA	3	True	AATAAA	-17	NA	235670170	235711135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_235670651_235710642
transcript_147250.nnic	chrX	-	1323	2	NNC	ENSG00000182195.9	novel	784	2	NA	NA	-19	4	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTTTAATGGTTA	99	False	NA	-12	True	AATAAA	-23	NA	141177148	141175744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_141176812_141176892
transcript_147251.known	chrX	-	784	2	FSM	ENSG00000182195.9	ENST00000460721.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	231	False	NA	-16	True	AATAAA	-19	NA	141177016	141175748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_141176409_141176892
transcript_147253.known	chrX	-	408	2	FSM	ENSG00000198573.7	ENST00000358993.3	408	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	0	True	NA	NA	False	AATAAA	-15	NA	141242517	141241462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_141241739_141242385
transcript_147254.known	chrX	-	691	2	FSM	ENSG00000198021.7	ENST00000370519.3	691	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGCCTGTTTTCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	141585011	141583673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_141583960_141584606
transcript_147255.known	chrX	+	408	2	FSM	ENSG00000203926.5	ENST00000370518.4	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	-1	True	NA	NA	False	AATAAA	-15	NA	141589707	141590762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_141589840_141590486
transcript_147256.known	chrX	+	681	2	FSM	ENSG00000223438.1	ENST00000412163.1	681	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGAAAAGTTCTGTAT	NA	False	NA	NA	False	ATTAAA	-13	NA	141625863	141626733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_141626242_141626430
transcript_147257.known	chrX	-	590	2	FSM	ENSG00000189252.4	ENST00000370503.2	590	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGTGTTTATCTCTGCC	-1	True	NA	NA	False	AATAAA	-20	NA	143517475	143508734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_143509163_143517313
transcript_147258.known	chrX	-	8736	2	FSM	ENSG00000179542.16	ENST00000356928.2	8736	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTAGCCATTCAGTGT	2	True	NA	NA	False	AATAAA	-20	NA	143636101	143622789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_143631159_143635734
transcript_147259.known	chrX	-	3357	2	FSM	ENSG00000179542.16	ENST00000338017.8	3357	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	899	False	NA	NA	False	NA	NA	NA	143635204	143628127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_143631159_143634878
transcript_147262.nnic	chrX	+	685	2	NNC	ENSG00000225970.1	novel	318	3	NA	NA	-97	-15105	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAATAACCCAATCAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	143757639	143813028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_143757842_143812545
transcript_147263.known	chrX	+	1185	1	FSM	ENSG00000276380.2	ENST00000618570.1	1185	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAGTACTAGGTAATT	1	False	NA	1	True	ACTAAA	-25	NA	143884070	143885255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_143884100_143885300
transcript_147264.nnic	chrX	+	665	3	NNC	ENSG00000185985.11	novel	8421	5	NA	NA	0	-4696	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	4.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACACGCTTCTCCCTTG	-7	True	NA	NA	False	NA	NA	NA	145817828	145821146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_145818027_145820473_145820537_145820742
transcript_147267.known	chrX	-	2005	2	FSM	ENSG00000268066.5	ENST00000594922.5	2005	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGCAACTTAGTCTTCC	NA	False	NA	NA	False	AATAAA	-23	NA	147911817	147909430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_147910996_147911377
transcript_147269.nic	chrX	+	1875	16	FSM	ENSG00000102081.16	ENST00000495717.6	2874	16	21	978	7	30	multi-exon	TRUE	canonical	3	20	junction_15	59.10946530708	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	57	False	NA	23	True	AATAAA	-14	NA	147912100	147948534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_147912231_147921932_147921986_147925539_147925634_147928321_147928394_147928658_147928808_147929947_147930042_147930127_147930245_147932424_147932596_147932684_147932764_147936503_147936614_147937465_147937601_147940575_147940663_147943130_147943327_147944868_147945052_147945533_147945617_147948412
transcript_147276.known	chrX	+	1832	2	FSM	ENSG00000102081.16	ENST00000621447.1	1832	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTGTGGAGAAGTGTTAC	79	False	NA	NA	False	AATAAA	-18	NA	147912122	147914451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_147912231_147912727
transcript_147277.known	chrX	+	470	4	ISM	ENSG00000102081.16	ENST00000475038.3	2747	16	31069	978	-1448	30	3prime_fragment	FALSE	canonical	3	20	junction_3	96.4860381379376	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	2666	False	NA	23	True	AATAAA	-14	NA	147943244	147948534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_147943327_147944868_147945052_147945533_147945617_147948412
transcript_147280.nnic	chrX	-	848	5	Intergenic	novelGene_93	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	0.707106781186548	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTCATTGTTGTTTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	149436263	149364325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_149364594_149366379_149366518_149378932_149379034_149379128_149379281_149436074
transcript_147281.known	chrX	-	7580	9	FSM	ENSG00000010404.18	ENST00000340855.11	7580	9	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_1	27.7083020049948	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGTGTGCAATTCTT	4	True	NA	NA	False	AATAAA	-18	NA	149505306	149476987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_147282.known	chrX	-	1529	9	FSM	ENSG00000010404.18	ENST00000466323.5	1529	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	75.2694119480151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	-37	False	NA	0	True	AATAAA	-26	NA	149505347	149487130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149487314_149490313_149490441_149491537_149491668_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_147284.known	chrX	-	1399	8	FSM	ENSG00000010404.18	ENST00000370441.8	1399	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	51.6096020175332	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	-37	False	NA	0	True	AATAAA	-26	NA	149505347	149487130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_147288.nic	chrX	+	1300	6	NIC	ENSG00000197620.11	novel	1204	5	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	32.2589522458495	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCAATAAATACTGTCCA	47	False	NA	NA	False	NA	NA	NA	149540666	149549940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738_149546918_149549415
transcript_147290.known	chrX	+	1524	6	FSM	ENSG00000197620.11	ENST00000434353.6	1524	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	33.5046265461951	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCAATAAATACTGTCCA	-31	True	NA	NA	False	NA	NA	NA	149540986	149549940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149541344_149542018_149542067_149545367_149545501_149545601_149545884_149546738_149546918_149549415
transcript_147293.known	chrX	+	1204	5	FSM	ENSG00000197620.11	ENST00000450602.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	30.5122926047847	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	10	True	NA	NA	False	AATAAA	-15	NA	149540629	149547309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_147295.known	chrX	+	1208	5	FSM	ENSG00000197620.11	ENST00000423540.6	1208	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.6655566788406	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTGTGTGATGCCTC	-35	True	NA	NA	False	NA	NA	NA	149540982	149547154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149541293_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_147296.known	chrX	+	2407	5	FSM	ENSG00000197620.11	ENST00000393985.8	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	37.1348892552543	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTGCAGTGTTTCTGA	-6	True	NA	NA	False	ATTAAA	-42	NA	149541011	149548331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149541344_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_1473.known	chr1	+	1922	9	FSM	ENSG00000142655.13	ENST00000356607.9	1922	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	12.0409457685017	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	-3	True	NA	21	True	AATAAA	-21	NA	10474949	10630758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10475003_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_14730.nnic	chr1	-	1213	3	NNC	ENSG00000116962.15	novel	5792	20	NA	NA	-118	-70229	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	99.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATGCGGTTGAATATG	2757	False	NA	NA	False	AATAAA	-13	NA	236065227	236046058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_236046599_236048689_236048990_236064854
transcript_147302.known	chrX	-	891	4	FSM	ENSG00000267978.6	ENST00000593349.5	891	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCGCCCTCCTGATCA	7922	False	NA	NA	False	NA	NA	NA	149587444	149582592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149583245_149583319_149583389_149583546_149583634_149587361
transcript_147303.known	chrX	-	1814	4	FSM	ENSG00000267978.6	ENST00000595065.6	1814	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCCTGTTCACTGGCTC	7907	False	NA	NA	False	AATAAA	-15	NA	149587459	149581652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149583245_149583319_149583389_149583546_149583634_149587393
transcript_147304.known	chrX	-	2720	7	FSM	ENSG00000269556.9	ENST00000600449.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	19.4050394371038	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	6	True	NA	NA	False	AATAAA	-17	NA	149631792	149596555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
transcript_147305.known	chrX	-	2662	6	FSM	ENSG00000269556.9	ENST00000611119.4	2662	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	100.266843971474	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631912	149596556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149631542
transcript_14731.known	chr1	-	4994	16	FSM	ENSG00000086619.15	ENST00000354619.10	4994	16	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_11	7.03009404078083	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTTATTTAATTTTTT	0	True	NA	NA	False	ATTAAA	-45	NA	236281958	236215100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_236218577_236220831_236220966_236221923_236222011_236225069_236225140_236226268_236226516_236226646_236226740_236230223_236230251_236232827_236232840_236235788_236235836_236236277_236236399_236243421_236243496_236249884_236249968_236252049_236252092_236253421_236253506_236269874_236269995_236281681
transcript_147311.known	chrX	-	2178	4	FSM	ENSG00000269556.9	ENST00000612022.1	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	113.420554672521	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	17	True	NA	NA	False	AATAAA	-17	NA	149631719	149596555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149631542
transcript_147312.known	chrX	-	903	4	FSM	ENSG00000269556.9	ENST00000507237.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	4.71404520791032	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCTAAAGTTTAATTG	38	True	NA	-15	True	AATAAA	-16	NA	149631698	149603708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149604071_149608626_149608835_149611286_149611464_149631542
transcript_147317.nic	chrX	-	884	3	ISM	ENSG00000269556.9	ENST00000507237.5	903	4	-50	4625	-28	120	5prime_fragment	FALSE	canonical	3	298	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGTTTTCAAAAGTAAAA	-12	True	NA	NA	False	AATGAA	-26	NA	149631748	149608333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_149608835_149611286_149611464_149631542
transcript_147318.known	chrX	-	1913	4	NNC	ENSG00000269556.9	novel	2662	6	NA	NA	1750	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	126.072289668357	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	8218	False	NA	NA	False	AATAAA	-16	NA	149600470	149596556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_149597183_149597260_149598256_149599553_149599678_149600302
transcript_147320.known	chrX	-	283	2	FSM	ENSG00000269556.9	ENST00000511776.1	283	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTTCCCCGGTGTCT	116	False	NA	NA	False	NA	NA	NA	149631682	149608691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149608835_149631542
transcript_147322.nic	chrX	+	1955	2	ISM	ENSG00000280752.1	ENST00000629221.1	685	3	-65	20256	-65	-20256	5prime_fragment	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCGAAGTACAGTAACTTCA	NA	False	NA	NA	False	GATAAA	-17	NA	149825642	149859543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_149825817_149857762
transcript_147325.known	chrX	+	3319	6	FSM	ENSG00000235703.7	ENST00000671125.1	3319	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.03960780543711	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAATACTTTATACGTG	7430	False	NA	NA	False	AATAAA	-9	NA	149946061	150017185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149948176_149948305_149948395_149960764_149960949_150015950_150016141_150016333_150016501_150016610
transcript_147330.known	chrX	-	1440	6	FSM	ENSG00000197021.9	ENST00000462691.5	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	74.9682599504617	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	34	True	NA	NA	False	AATAAA	-20	NA	149938435	149929526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_147336.nnic	chrX	-	1356	6	NNC	ENSG00000197021.9	novel	1333	5	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	5	junction_1	90.4221211872405	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938602	149932196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_149932346_149932433_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_147338.known	chrX	-	1129	6	FSM	ENSG00000197021.9	ENST00000370409.7	1129	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	108.680449023732	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCACCTGATCCCTTTG	-3	True	NA	NA	False	NA	NA	NA	149938472	149932578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938192
transcript_14734.known	chr1	+	3116	6	FSM	ENSG00000186197.15	ENST00000359362.6	3116	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	6.7705243519243	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTTGTTGGTTTATT	-9	True	NA	22	True	AAAAAG	-45	NA	236395412	236484930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236395661_236409215_236409275_236414259_236414300_236427391_236427451_236468230_236468277_236482266
transcript_147349.nic	chrX	-	1482	5	NIC	ENSG00000197021.9	novel	1333	5	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	82.7749207187781	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938589	149932196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_147350.known	chrX	-	1316	5	FSM	ENSG00000197021.9	ENST00000370404.5	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	92.7523584605804	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTTAGTGTTTGAG	10	True	NA	NA	False	AATAAA	-11	NA	149938459	149932200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
transcript_147351.nnic	chrX	-	1365	5	NNC	ENSG00000197021.9	novel	1333	5	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_4	94.2983960627115	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938726	149932196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938395
transcript_147355.known	chrX	+	3412	15	FSM	ENSG00000171100.16	ENST00000370396.7	3412	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	11.7822505732746	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCAGGGCTGTGA	1	True	NA	11	True	AATAAA	-20	NA	150568620	150673143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037_150619140_150638942_150639027_150641268_150641419_150645682_150645872_150649715_150649902_150657820_150658028_150659663_150659757_150660370_150660485_150663432_150663610_150671427
transcript_147361.nic	chrX	+	1213	5	ISM	ENSG00000171100.16	ENST00000687365.1	1411	6	-17	4553	1	-4553	5prime_fragment	FALSE	canonical	3	68	junction_1	10.6389614154766	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCTTAATTTGAAGAC	-19	True	NA	NA	False	NA	NA	NA	150568600	150615498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588
transcript_147366.nic	chrX	-	660	2	ISM	ENSG00000102181.21	ENST00000491877.1	437	5	-87	15909	-28	-15909	5prime_fragment	FALSE	canonical	3	38	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAGAAATGGTTGT	106	False	NA	NA	False	AAAAAG	-11	NA	150898696	150830808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_150831294_150898521
transcript_147367.nnic	chrX	-	961	2	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	-42	-82299	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTTGAATTTTCTTTT	-2	True	NA	3	True	AATAAA	-19	NA	150898710	150897198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_150897971_150898521
transcript_147368.nnic	chrX	-	436	2	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	-42	-82824	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCTTAAACATGTACC	-2	True	NA	NA	False	AATAAA	-20	NA	150898710	150897723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_150897971_150898521
transcript_147369.known	chrX	-	3567	11	FSM	ENSG00000102181.21	ENST00000370377.8	3567	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	8.68101376568428	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTCTTCTGATGGTGT	-24	True	NA	-26	True	AATAAA	-16	NA	150898668	150766335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_150769102_150770303_150770370_150776173_150776294_150777443_150777483_150793690_150793757_150795205_150795290_150795417_150795487_150814861_150814937_150816006_150816079_150831230_150831294_150898521
transcript_14737.nnic	chr1	+	758	4	NNC	ENSG00000186197.15	novel	3116	6	NA	NA	-86	-64472	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	22.0151463012778	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTCTCGTGTCCCTGCT	135	False	NA	19	True	AATACA	-29	NA	236395326	236417847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_236395661_236409215_236409275_236414259_236414300_236417522
transcript_147377.known	chrX	+	812	5	FSM	ENSG00000029993.15	ENST00000448905.6	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1601.61346382328	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	41	False	NA	13	True	AATAAA	-18	NA	150983405	150987932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_150983592_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_14738.known	chr1	-	8459	45	FSM	ENSG00000119285.11	ENST00000366582.8	8459	45	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_32	55.9406415041947	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTGCCTCTTCCTGA	-9	True	NA	-19	True	CATAAA	-17	NA	236604516	236549004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_236550991_236551998_236552108_236553580_236553740_236554597_236554753_236555295_236555465_236555550_236555656_236555804_236555940_236556099_236556259_236557194_236557346_236558236_236558530_236558994_236559136_236559713_236559838_236561224_236561272_236564497_236564662_236565918_236566046_236566645_236566877_236568995_236569125_236571350_236571473_236571567_236571687_236572410_236572555_236572724_236572829_236574201_236574334_236574660_236574904_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_147380.known	chrX	+	3507	5	FSM	ENSG00000029993.15	ENST00000325307.12	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	3223	junction_4	426.168027308478	9325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCAGTGGGCTGTCTGC	13	True	NA	36	True	AATAAA	-26	NA	150983334	150990771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_150983377_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_147381.known	chrX	+	693	4	FSM	ENSG00000160131.14	ENST00000370361.5	693	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	310.65557920129	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTCTTAAGGAGTCACG	2806	False	NA	26	True	AATAAA	-20	NA	151396565	151405157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151396648_151396798_151397058_151403630_151403741_151404915
transcript_147382.known	chrX	+	4715	3	FSM	ENSG00000160131.14	ENST00000330374.7	4715	3	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	2	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTGTCCTGATTCA	4	True	NA	18	True	ATTAAA	-20	NA	151397205	151409364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151397362_151403630_151403741_151404915
transcript_147385.known	chrX	+	482	2	FSM	ENSG00000214915.3	ENST00000454307.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGAACCTGTTGTAA	NA	False	NA	-17	True	NA	NA	NA	151515550	151516245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151515681_151515893
transcript_147386.known	chrX	+	5705	4	FSM	ENSG00000130032.17	ENST00000674457.1	5705	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.49691252107735	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTCATCCATCTTG	58	False	NA	16	True	AATAAA	-23	NA	151695457	151705924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151695545_151698783_151698822_151699995_151700157_151700505
transcript_147387.known	chrX	+	914	3	FSM	ENSG00000147381.12	ENST00000448295.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGAGGAAATCTGGGA	564	False	NA	NA	False	NA	NA	NA	151913462	151924315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151913589_151923452_151923525_151923599
transcript_147388.known	chrX	+	1773	3	FSM	ENSG00000147381.12	ENST00000360243.6	1773	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCATTTCTTCTCTAT	1322	False	NA	NA	False	AATAAA	-17	NA	151918226	151925170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151918357_151923452_151923525_151923599
transcript_147389.known	chrX	+	686	3	FSM	ENSG00000147381.12	ENST00000425182.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCAACACCTACACCCT	1433	False	NA	NA	False	NA	NA	NA	151919689	151924180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151919723_151923452_151923525_151923599
transcript_147390.known	chrX	+	1770	3	FSM	ENSG00000147381.12	ENST00000393920.6	1770	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTCATTTCTTCTCT	613	False	NA	NA	False	AATAAA	-15	NA	151916873	151925168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151917003_151923452_151923525_151923599
transcript_147391.known	chrX	+	1767	3	FSM	ENSG00000147381.12	ENST00000684668.1	1767	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTCATTTCTTCTCT	3296	False	NA	NA	False	AATAAA	-15	NA	151916194	151925168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151916321_151923452_151923525_151923599
transcript_147392.known	chrX	-	3669	10	FSM	ENSG00000011677.13	ENST00000370314.9	3669	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	21.3807343762822	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTGCAGAACTTTCT	-7	True	NA	0	True	ATTAAA	-17	NA	152451315	152166233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152168564_152189729_152189942_152197632_152197786_152208000_152208145_152224762_152224846_152255777_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
transcript_147397.nic	chrX	-	1626	5	ISM	ENSG00000011677.13	ENST00000370314.9	3669	10	-58	88723	-58	-3899	5prime_fragment	FALSE	canonical	3	46	junction_4	9.08295106229247	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTCTTTCCCCAATAC	352	False	NA	NA	False	AATAAA	-23	NA	152451373	152254956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
transcript_147398.nnic	chrX	+	1603	9	NNC	ENSG00000268089.3	novel	6468	9	NA	NA	-6	1417	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	10.51115478908	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAGACAATGGCTAACT	-14	True	NA	4	True	AATAAA	-23	NA	152637888	152658959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525_152651783_152658828
transcript_14740.nic	chr1	-	2389	17	ISM	ENSG00000119285.11	ENST00000366581.6	6538	44	-61	34382	-49	10719	5prime_fragment	FALSE	canonical	3	301	junction_4	43.1225995708747	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTTGAAAGTGTCATTA	-4	True	NA	NA	False	AATAAA	-1	NA	236604565	236585052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_147400.known	chrX	+	6468	9	FSM	ENSG00000268089.3	ENST00000598523.3	6468	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	11.3330269566431	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCATCGTGTTTCCTC	-8	True	NA	11	True	AATAAA	-24	NA	152637894	152657542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525_152651783_152652540
transcript_147401.known	chrX	-	645	4	FSM	ENSG00000198930.13	ENST00000452779.3	645	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	0	True	NA	NA	False	AATAAA	-21	NA	152733721	152727483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152727864_152728073_152728225_152732444_152732505_152733667
transcript_147406.known	chrX	-	1413	5	FSM	ENSG00000147400.10	ENST00000370277.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	1	190	junction_3	129.265231210871	1453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGAATTTATTTGC	-13	True	NA	2	True	NA	NA	NA	152830757	152826993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152827931_152828536_152828675_152829148_152829278_152829601_152829761_152830707
transcript_147416.known	chrX	+	1630	9	FSM	ENSG00000147383.11	ENST00000440023.5	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	120.596887915899	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTCTCTCTGTTTA	3220	False	NA	29	True	NA	NA	NA	152830966	152869363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152831118_152831633_152831701_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_147425.known	chrX	+	1833	8	FSM	ENSG00000147383.11	ENST00000370274.8	1833	8	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_6	22.7434673284978	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCGTGCCTGCCTGCA	-1	True	NA	NA	False	NA	NA	NA	152831062	152869729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152831118_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_147430.known	chrX	+	4148	21	FSM	ENSG00000147394.19	ENST00000318504.12	4101	21	-48	1	0	0	multi-exon	TRUE	canonical	3	18	junction_10	15.4385070521731	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTAAAGTTTTCTTTTG	8	True	NA	22	True	AATAAA	-22	NA	152914441	152973480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152914524_152914709_152914834_152915137_152915204_152917130_152917170_152917284_152917363_152918064_152918155_152918982_152919082_152920327_152920412_152920709_152920749_152922172_152922257_152931671_152931777_152932872_152932972_152938073_152938164_152945266_152945465_152959698_152959897_152963838_152963950_152965446_152965528_152967166_152967239_152969381_152969485_152970442_152970542_152971273
transcript_147431.known	chrX	+	3158	3	FSM	ENSG00000183837.10	ENST00000424805.1	3158	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTGT	5	True	NA	18	True	AATAAA	-18	NA	153056481	153060462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153056639_153056949_153058772_153059283
transcript_147432.known	chrX	-	3294	2	FSM	ENSG00000225110.3	ENST00000436629.3	3294	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGCCTCGCCTCTGCTCT	-1	True	NA	-6	True	AATAAA	-18	NA	153321767	153317679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153320758_153321551
transcript_147436.nic	chrX	-	1499	11	ISM	ENSG00000183479.13	ENST00000330912.7	2509	13	-5	3195	-5	-2948	5prime_fragment	FALSE	canonical	3	70	junction_3	177.330313257491	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	-18	True	NA	-19	True	AAGAAA	-15	NA	153470592	153447667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_147448.known	chrX	-	1306	10	FSM	ENSG00000213397.12	ENST00000370211.10	1306	10	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	33.8967204065672	2182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	-2	True	NA	-19	True	AAGAAA	-15	NA	153470576	153447667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_14745.known	chr1	+	5957	10	FSM	ENSG00000116977.19	ENST00000366584.9	5957	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	11.5127411973232	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGGTCTGTTATA	1	True	NA	NA	False	AATAAA	-32	NA	236523981	236552981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236543559_236543649_236544749_236544916_236548011
transcript_147457.known	chrX	+	2353	8	FSM	ENSG00000182492.16	ENST00000331595.9	2353	8	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	2.07019667802706	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	0	True	NA	12	True	ATTAAA	-19	NA	153494979	153509546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506640_153506829_153506924_153507046_153507186_153508247
transcript_147464.known	chrX	-	1253	5	FSM	ENSG00000262919.8	ENST00000576892.8	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	33.007574888198	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGACCCTTGGCTTTGCT	-6	True	NA	-5	True	AATAAA	-17	NA	153599139	153587924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153588455_153592505_153592734_153594546_153594680_153596003_153596188_153598961
transcript_147465.known	chrX	-	1164	5	FSM	ENSG00000262919.8	ENST00000440428.5	1164	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	47.0710898535396	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAATAGGGACCCTTGG	65	False	NA	-12	True	AATAAA	-10	NA	153599117	153587931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153588395_153592505_153592734_153594546_153594680_153596003_153596188_153598961
transcript_147466.nnic	chrX	+	420	2	NNC	ENSG00000260081.2	novel	2607	2	NA	NA	10	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCAGGTATTTACCATC	NA	False	NA	15	True	AATAAA	-27	NA	153599349	153599890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_153599572_153599692
transcript_147468.known	chrX	+	554	1	FSM	ENSG00000260081.2	ENST00000562749.1	554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTATTTACCATCTCA	NA	False	NA	18	True	AATAAA	-30	NA	153599339	153599893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153599300_153599900
transcript_147471.known	chrX	-	1473	12	FSM	ENSG00000130822.16	ENST00000340888.8	1473	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	6.94131242502585	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	3	True	NA	-6	True	AATAAA	-15	NA	153673813	153669732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673779
transcript_147479.known	chrX	+	3931	13	FSM	ENSG00000130821.17	ENST00000253122.10	3931	13	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	40.6764844706237	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTCCTGCTTCCGCCT	-2	True	NA	NA	False	AATAAA	-19	NA	153687925	153696588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153688837_153690374_153690507_153691303_153691554_153691974_153692108_153693040_153693176_153693262_153693367_153693461_153693587_153693904_153694018_153694129_153694268_153694343_153694447_153694532_153694634_153694718_153694890_153695073
transcript_147481.known	chrX	-	1433	9	FSM	ENSG00000185825.17	ENST00000647529.1	1433	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1254.85706357338	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCGGTGTGTGACTGC	-43	True	NA	-20	True	AATAAA	-19	NA	153724435	153700495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507_153723613_153724333
transcript_147483.known	chrX	-	1789	8	FSM	ENSG00000185825.17	ENST00000458587.8	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	1011.96462792099	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	-1	True	NA	-16	True	AATAAA	-23	NA	153724066	153700491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507
transcript_147487.known	chrX	-	1350	8	FSM	ENSG00000185825.17	ENST00000672675.1	1350	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1031.21972559149	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGTGCGGTGTGTGA	4	True	NA	-24	True	AATAAA	-15	NA	153724388	153700499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724260
transcript_147489.known	chrX	-	1284	8	FSM	ENSG00000185825.17	ENST00000345046.12	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	2639	junction_3	189.846447081287	13692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	5	True	NA	-16	True	AATAAA	-23	NA	153724387	153700491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_147490.known	chrX	-	1175	8	FSM	ENSG00000185825.17	ENST00000645377.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1038.55928466078	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGCGGTGTGTGACTG	4	True	NA	-21	True	AATAAA	-18	NA	153724388	153700496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153703039_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_147491.known	chrX	+	3669	10	FSM	ENSG00000101986.12	ENST00000218104.6	3669	10	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_7	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTCAGAGCCTGGT	0	True	NA	16	True	AGTAAA	-29	NA	153724855	153744755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153726167_153729231_153729413_153736111_153736255_153736344_153736514_153737156_153737252_153740091_153740238_153740573_153740720_153742986_153743072_153743220_153743347_153743488
transcript_14750.nic	chr1	-	675	2	ISM	ENSG00000119285.11	ENST00000366579.1	793	3	-77	772	-49	-772	5prime_fragment	FALSE	canonical	3	516	junction_1	0	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTCCCTGCCACGA	-4	True	NA	NA	False	NA	NA	NA	236604565	236603596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_236604128_236604421
transcript_147504.known	chrX	+	745	7	FSM	ENSG00000180879.14	ENST00000370087.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	713.743281735262	5477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	16	True	NA	46	True	AATAAA	-27	NA	153794190	153798498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794335_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_147508.known	chrX	+	1671	7	FSM	ENSG00000180879.14	ENST00000320857.7	1671	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	707.116307422069	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	NA	False	NA	46	True	AATAAA	-27	NA	153793515	153798498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794586_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_14751.known	chr1	+	2965	6	FSM	ENSG00000077522.15	ENST00000461367.2	2965	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.26190128606002	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAACTTAATTTATAAA	11	False	NA	NA	False	ATTAAA	-18	NA	236753811	236764603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236754082_236755018_236755199_236757485_236757633_236759723_236759790_236761014_236761174_236762460
transcript_147512.known	chrX	+	785	7	FSM	ENSG00000180879.14	ENST00000471880.5	785	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	879.332401439991	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	22	False	NA	41	True	AATAAA	-22	NA	153794678	153798493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794755_153795662_153795862_153796438_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_147530.known	chrX	-	1335	13	FSM	ENSG00000067829.20	ENST00000217901.10	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	28.7560380132977	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGCGTGGGCCTCCCT	0	True	NA	-37	True	AATAAA	-15	NA	153794375	153785767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_147531.known	chrX	-	739	6	FSM	ENSG00000067829.20	ENST00000454076.5	739	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	134.568049699771	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCGTGGGCCTCCCTC	0	True	NA	-36	True	AATAAA	-16	NA	153787553	153785766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153786010_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463
transcript_147532.known	chrX	+	608	6	FSM	ENSG00000180879.14	ENST00000370086.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_5	120.741707789811	9987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTGCTGGCTTGCG	11	True	NA	47	True	AATAAA	-28	NA	153794667	153798499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_147533.known	chrX	+	2482	4	FSM	ENSG00000180879.14	ENST00000460616.5	2482	4	0	0	0	0	multi-exon	FALSE	canonical	3	1858	junction_3	109.393276250823	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	2	True	NA	41	True	AATAAA	-22	NA	153794658	153798493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070
transcript_147534.known	chrX	+	526	5	FSM	ENSG00000180879.14	ENST00000370085.3	526	5	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	773.209989265529	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	17	True	NA	46	True	AATAAA	-27	NA	153794673	153798498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794755_153796433_153796553_153797724_153797815_153798070_153798137_153798328
transcript_147535.known	chrX	+	701	5	FSM	ENSG00000180879.14	ENST00000485612.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_4	126.52149026944	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGGGGCTGCTGGCTTG	1595	False	NA	45	True	AATAAA	-26	NA	153796251	153798497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_147536.known	chrX	-	1662	11	FSM	ENSG00000067829.20	ENST00000370093.5	1662	11	0	0	0	0	multi-exon	TRUE	canonical	3	258	junction_4	19.1627242322171	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCGTGGGCCTCCCTC	-6	True	NA	-36	True	AATAAA	-16	NA	153794381	153785766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_147539.nnic	chrX	-	469	3	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	0.5	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCCATATTTAATTCT	NA	False	NA	-4	True	AATAAA	-21	NA	153844824	153841260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_153841480_153843961_153844098_153844710
transcript_147543.nnic	chrX	-	429	2	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCCATATTTAATTCT	NA	False	NA	-4	True	AATAAA	-21	NA	153844920	153841260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_153841480_153844710
transcript_147545.nnic	chrX	-	425	2	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCCATATTTAATTCT	NA	False	NA	-4	True	AATAAA	-21	NA	153845244	153841260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_153841480_153845038
transcript_147547.known	chrX	-	3254	22	FSM	ENSG00000089820.16	ENST00000350060.10	3254	22	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_14	16.9506419653814	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGAGCCAGCTCTCTGT	20	True	NA	-5	True	CATAAA	-20	NA	153926264	153907377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_147550.known	chrX	-	1080	7	FSM	ENSG00000102030.16	ENST00000466877.5	1080	7	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	19.3792558049982	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACTTTGTGTGTGAGCG	-7	True	NA	-30	True	AATAAA	-18	NA	153935015	153929925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153930224_153930762_153930848_153932070_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_147551.known	chrX	-	1603	8	FSM	ENSG00000102030.16	ENST00000464845.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_3	25.7206341369758	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTCTGTGTTGTA	9742	False	153935065	-11	True	NA	NA	NA	153935037	153929224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_147553.known	chrX	-	1304	11	FSM	ENSG00000102032.13	ENST00000423624.5	1304	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.41202365109392	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGTCCGCTCCACCT	11	True	NA	-18	True	NA	NA	NA	153944626	153935285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_147554.nic	chrX	-	1405	6	ISM	ENSG00000102032.13	ENST00000423624.5	1304	11	-76	6947	-15	12	5prime_fragment	FALSE	canonical	0	0	junction_5	3.26190128606002	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACAACTTGCTAGGCCC	8676	False	NA	NA	False	NA	NA	NA	153944702	153942232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_147555.known	chrX	-	1334	11	FSM	ENSG00000102032.13	ENST00000393700.8	1334	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.94368283772331	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTGTGCGCGCGTC	-6	True	NA	-1	True	AATAAA	-17	NA	153944643	153935268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944583
transcript_147557.known	chrX	-	8876	26	FSM	ENSG00000172534.14	ENST00000310441.12	8876	26	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_19	73.1283802637526	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTAGGTGTCTCACTGTG	9	True	NA	-4	True	ATTAAA	-19	NA	153971818	153947556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153949387_153949552_153949617_153950242_153950544_153950812_153950999_153951349_153951488_153951588_153951708_153951840_153952159_153952513_153952959_153953606_153953771_153954065_153955543_153956190_153956412_153956624_153956764_153956917_153957061_153957313_153957534_153957781_153957887_153958024_153958250_153958568_153958767_153959330_153959492_153959801_153960162_153960234_153960415_153961541_153961649_153962221_153962307_153963224_153963434_153964123_153964285_153964577_153964727_153970647
transcript_147558.known	chrX	+	1452	2	FSM	ENSG00000177854.8	ENST00000369982.5	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCGTCTGGAGTATCTT	12	True	NA	8	True	NA	NA	NA	153972753	153983194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153972861_153981849
transcript_147559.known	chrX	+	440	2	FSM	ENSG00000177854.8	ENST00000425274.1	440	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGCTGTCGTGGCTGCA	74	False	NA	NA	False	NA	NA	NA	153972857	153982260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153972887_153981849
transcript_147560.known	chrX	-	3581	14	FSM	ENSG00000184216.14	ENST00000369980.8	3581	14	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_13	17.2067139778971	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGGGCTCTACTTGTGGA	-31	True	NA	-7	True	AATAAA	-15	NA	154019902	154010506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154011918_154012528_154012679_154013042_154013434_154014041_154014279_154016031_154016098_154016436_154016645_154016948_154017068_154018005_154018121_154018290_154018356_154018598_154018788_154018974_154019079_154019196_154019329_154019430_154019599_154019676
transcript_147562.known	chrX	-	1712	5	FSM	ENSG00000169057.24	ENST00000628176.2	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	45.0194402452985	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTAGAGTTTCGTGG	1	True	NA	NA	False	AATAAA	-21	NA	154097737	154030238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154092183_154092308_154097603
transcript_147563.known	chrX	-	10467	4	FSM	ENSG00000169057.24	ENST00000303391.11	10467	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	23.5702260395516	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	-21	True	NA	-3	True	GATAAA	-18	NA	154097717	154021572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154031451_154032206_154032558_154092183_154092308_154097603
transcript_147564.known	chrX	-	1174	4	FSM	ENSG00000169057.24	ENST00000407218.5	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	52.4743323497837	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCAGCGTCTGCAAAG	7	True	NA	NA	False	NA	NA	NA	154097689	154030604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154097603
transcript_147565.known	chrX	-	10343	3	FSM	ENSG00000169057.24	ENST00000453960.7	10343	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	42.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	-21	True	NA	-3	True	GATAAA	-18	NA	154097717	154021572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154031451_154032206_154032558_154097603
transcript_147566.nic	chrX	-	368	3	ISM	ENSG00000169057.24	ENST00000628176.2	1712	5	-11	2220	-11	0	5prime_fragment	FALSE	canonical	3	83	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAGCCCGTGCAGCCAT	NA	False	NA	NA	False	AAAAAG	-36	NA	154097748	154032458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_154032558_154092183_154092308_154097603
transcript_147567.known	chrX	-	581	3	FSM	ENSG00000169057.24	ENST00000627864.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTTACGAGTCTTTTT	16	True	NA	NA	False	NA	NA	NA	154097680	154090801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154091182_154092183_154092308_154097603
transcript_147568.nic	chrX	-	220	2	ISM	ENSG00000169057.24	ENST00000407218.5	1174	4	-52	1871	-4	-1	5prime_fragment	FALSE	canonical	3	48	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAAGAGGGCAAGCA	-3	True	NA	NA	False	AAAAAG	-19	NA	154097741	154032475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_154032558_154097603
transcript_14757.known	chr1	+	10067	32	FSM	ENSG00000116984.15	ENST00000680454.1	10067	32	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_13	11.7406060927704	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATAACCTAAAATCTGG	-32	True	NA	-4	True	AATAAA	-11	NA	236795259	236900656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236795738_236803427_236803643_236806143_236806234_236808703_236808774_236810502_236810596_236812737_236812845_236815603_236815664_236816448_236816544_236824118_236824220_236825337_236825400_236826828_236826897_236829188_236829269_236831965_236832079_236835546_236835688_236838413_236838600_236850343_236850524_236852520_236852638_236852947_236853089_236859832_236859923_236861124_236861278_236862235_236862344_236863453_236863555_236873772_236873841_236874725_236874847_236880754_236880837_236885120_236885220_236886291_236889337_236891132_236891330_236894356_236894558_236895357_236895551_236897005_236897119_236897557
transcript_147570.known	chrX	-	2558	1	FSM	ENSG00000169057.24	ENST00000629277.1	2558	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAGATGAGTTTAATAGGC	215	False	NA	NA	False	NA	NA	NA	154097523	154094965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154095000_154097500
transcript_147574.known	chrX	+	1114	6	FSM	ENSG00000102119.12	ENST00000684633.1	1114	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	147.603522993186	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTTGGGGCTCCAGGA	70	False	NA	82	True	NA	NA	NA	154379508	154381574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379563_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_147575.known	chrX	+	798	6	FSM	ENSG00000102119.12	ENST00000684082.1	798	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	171.475246026941	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGGGGCAGGGGCAGG	46	False	NA	NA	False	NA	NA	NA	154379484	154381273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380276_154380368_154380752_154380803_154380881
transcript_147576.known	chrX	+	946	6	FSM	ENSG00000102119.12	ENST00000428228.5	946	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	168.476229777378	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGCAGGGGCTTTATGT	-21	True	NA	NA	False	NA	NA	NA	154379360	154381283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379538_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_147577.known	chrX	+	501	5	FSM	ENSG00000102119.12	ENST00000468294.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	38.7709620721488	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCCGGGACAGTGCCTA	86	False	NA	NA	False	NA	NA	NA	154379524	154380894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380233_154380368_154380752
transcript_147579.known	chrX	+	1281	5	FSM	ENSG00000102119.12	ENST00000683576.1	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	34.9606922128267	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	70	False	NA	31	True	AATAAA	-19	NA	154379508	154381523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752_154380803_154380881
transcript_14758.known	chr1	+	370	1	FSM	ENSG00000237991.3	ENST00000450819.1	370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCACGTTGTCAATAAAG	20	False	NA	NA	False	NA	NA	NA	236981338	236981708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236981300_236981700
transcript_147580.known	chrX	+	1284	4	FSM	ENSG00000102119.12	ENST00000486738.5	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	39.9694327649962	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGGGGCAGGGGCTTT	-41	True	NA	NA	False	NA	NA	NA	154379340	154381279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752
transcript_147581.known	chrX	+	1906	11	FSM	ENSG00000102125.16	ENST00000601016.6	1906	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	38.1928003686559	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGGCCTCTCTGTAG	-25	True	NA	24	True	CATAAA	-26	NA	154411538	154421726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154414100_154414191_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_147582.known	chrX	+	1790	10	FSM	ENSG00000102125.16	ENST00000612460.5	1790	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	36.7950613970119	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATATGTGTTGGCTTGTT	-25	True	NA	-2	True	NA	NA	NA	154411538	154421700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154411953_154412085_154412215_154413206_154413253_154413481_154413568_154419542_154419624_154419704_154419747_154420031_154420095_154420211_154420265_154420657_154420736_154420902
transcript_147584.known	chrX	-	3008	10	FSM	ENSG00000013563.14	ENST00000369809.5	3008	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	16.1665712101038	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	11	True	NA	NA	False	AATAAA	-26	NA	154412090	154401237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417_154409676_154411890
transcript_147585.known	chrX	-	2249	9	FSM	ENSG00000013563.14	ENST00000309585.9	2249	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	16.7332005306815	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATGGCTGTAAACTG	-11	True	NA	NA	False	AATAAA	-20	NA	154412112	154401760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154411890
transcript_14759.nic	chr1	+	377	4	ISM	ENSG00000198626.18	ENST00000366574.7	16583	105	461222	303494	-148083	-213129	internal_fragment	FALSE	canonical	0	0	junction_2	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGCTACCCAAGAAGTAA	2214	False	NA	NA	False	NA	NA	NA	237503405	237530494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_237503506_237506709_237506815_237511687_237511792_237530426
transcript_147594.known	chrX	-	2610	8	FSM	ENSG00000013563.14	ENST00000369807.6	2610	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	8.83176086632785	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	-1	True	NA	NA	False	AATAAA	-28	NA	154409254	154401235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111
transcript_14760.known	chr1	-	1585	2	FSM	ENSG00000215808.4	ENST00000657655.1	1585	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAATGTGTATGA	NA	False	NA	NA	False	AATAAA	-28	NA	238486060	238480372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_238481682_238485784
transcript_14761.known	chr1	-	1536	2	FSM	ENSG00000215808.4	ENST00000648241.1	1536	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAATGTGTATGA	-6	True	NA	NA	False	AATAAA	-28	NA	238486038	238480372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_238481682_238485811
transcript_147640.known	chrX	+	748	6	FSM	ENSG00000147403.18	ENST00000406022.6	748	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7358.04812161486	41396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTATGTCTTTGTATC	403	False	NA	25	True	AATAAA	-13	NA	154398889	154400909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398961_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
transcript_147641.known	chrX	+	585	6	FSM	ENSG00000147403.18	ENST00000458500.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	7219.81210281819	9154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATCTACATTCT	-2	True	NA	33	True	AATAAA	-21	NA	154398377	154400917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400701
transcript_147642.known	chrX	+	802	5	FSM	ENSG00000147403.18	ENST00000467168.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	18400	junction_4	223.408118697598	5708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	10	False	NA	29	True	AATAAA	-17	NA	154398496	154400913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463
transcript_147643.known	chrX	+	839	5	FSM	ENSG00000147403.18	ENST00000485196.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	17529	junction_4	543.22140974008	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTCTGGACAAGTGGC	-1	True	NA	-67	True	NA	NA	NA	154398378	154400817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337_154399595_154399802_154399942_154400463_154400627_154400701
transcript_147644.known	chrX	+	1519	3	FSM	ENSG00000147403.18	ENST00000489200.5	1519	3	0	0	0	0	multi-exon	FALSE	canonical	3	18667	junction_1	162.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTCCTGTCCACCTAT	-3	True	NA	14	True	AATAAA	-2	NA	154398376	154400898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337_154399595_154399802
transcript_147645.known	chrX	+	1731	2	FSM	ENSG00000147403.18	ENST00000482732.1	1731	2	0	0	0	0	multi-exon	FALSE	canonical	3	18667	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	8	True	NA	29	True	AATAAA	-17	NA	154398387	154400913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337
transcript_147646.known	chrX	+	1369	5	FSM	ENSG00000147403.18	ENST00000491035.5	1369	5	0	0	0	0	multi-exon	FALSE	canonical	3	17529	junction_4	545.379225860318	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	-3	True	NA	29	True	AATAAA	-17	NA	154398376	154400913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154400627_154400701
transcript_147648.known	chrX	-	598	2	FSM	ENSG00000197180.3	ENST00000360656.3	633	2	33	2	33	-2	multi-exon	FALSE	canonical	3	35	junction_1	0	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCTGGCACTTTGTT	-9	True	NA	-2	True	AATAAA	-21	NA	154428479	154424379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154424626_154428127
transcript_147649.known	chrX	+	2054	10	FSM	ENSG00000071553.18	ENST00000369762.7	2054	10	0	0	0	0	multi-exon	FALSE	canonical	2	430	junction_7	94.7652069297822	2013	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	-2	True	NA	16	True	AATAAA	-21	NA	154428676	154436516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
transcript_14765.nic	chr1	+	566	2	ISM	ENSG00000133019.12	ENST00000255380.8	8780	5	-36	283166	-36	26079	5prime_fragment	FALSE	canonical	1	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATCCTTTTTCTAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	239629036	239632286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_239629540_239632223
transcript_147650.known	chrX	+	2240	11	FSM	ENSG00000203879.12	ENST00000447750.7	2240	11	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_5	92.9908059971522	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	-6	True	NA	23	True	AATAAA	-17	NA	154437153	154443467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440140_154440374_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_147651.nic	chrX	+	2493	10	NIC	ENSG00000203879.12	novel	2240	11	NA	NA	-18	0	intron_retention	FALSE	canonical	3	872	junction_5	68.2999918659504	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	133	False	NA	23	True	AATAAA	-17	NA	154437135	154443467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_147654.known	chrX	+	600	4	FSM	ENSG00000203879.12	ENST00000475976.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_2	21.6999743983464	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGAAGGACCAGAGAGG	-6	True	NA	NA	False	NA	NA	NA	154437153	154439251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005
transcript_147656.known	chrX	+	1014	5	FSM	ENSG00000203879.12	ENST00000481304.5	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_4	68.7259048685428	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAGGTGAGGACATGGGT	1	True	NA	NA	False	NA	NA	NA	154437188	154440500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940
transcript_147658.known	chrX	+	1337	13	FSM	ENSG00000071859.15	ENST00000393600.8	1337	13	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_5	49.5991571388959	600	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	2	True	NA	54	True	NA	NA	NA	154444140	154450654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
transcript_147660.known	chrX	-	949	3	FSM	ENSG00000196976.8	ENST00000357360.5	967	3	24	-6	24	6	multi-exon	FALSE	canonical	3	1749	junction_1	95.5	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATTTGCAGCT	15	True	NA	-16	True	AATAAA	-19	NA	154479257	154477768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154478059_154478282_154478412_154478727
transcript_147662.known	chrX	-	2327	4	FSM	ENSG00000102178.13	ENST00000369660.9	2327	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	29.6348143611905	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTGCGTCCAATCA	-9	True	NA	-4	True	AATAAA	-22	NA	154486615	154483716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154485650_154485770_154485980_154486227_154486334_154486536
transcript_147666.known	chrX	-	1862	3	FSM	ENSG00000126903.16	ENST00000393587.4	1862	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	42.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATATATTTCAATAAA	-4	True	NA	-37	True	NA	NA	NA	154490663	154487342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154489083_154490306_154490359_154490593
transcript_147667.known	chrX	-	1763	4	FSM	ENSG00000126903.16	ENST00000369649.8	1763	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	38.3231870630127	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCTTCTACTCTTTGCC	45	False	NA	0	True	AATAAA	-18	NA	154490614	154487305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154488497_154488583_154489083_154490306_154490359_154490593
transcript_147668.known	chrX	-	1815	11	FSM	ENSG00000071889.17	ENST00000322269.10	1815	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	23.546761985462	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	-16	True	NA	-2	True	AATAAA	-29	NA	154516242	154506159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759_154515813_154515909
transcript_147669.known	chrX	-	1901	10	FSM	ENSG00000071889.17	ENST00000621967.4	1901	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	23.6429197503394	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-16	True	NA	-13	True	AATAAA	-18	NA	154516242	154506170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_14767.known	chr1	-	2295	17	FSM	ENSG00000182901.18	ENST00000366564.5	2295	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	5.39675828623073	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTTTGTAACTTTTGA	145	False	NA	-11	True	ATTAAA	-15	NA	241357085	240775514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_240776214_240802903_240802994_240806139_240806327_240811917_240812044_240813617_240813729_240814715_240814778_240816316_240816416_240827097_240827173_240868586_240868669_240868775_240868853_240870054_240870120_240930716_240930769_240936599_240936707_240983078_240983130_241098665_241098763_241355698_241355827_241356898
transcript_147670.known	chrX	-	1712	10	FSM	ENSG00000071889.17	ENST00000359889.9	1712	10	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_9	15.2663593693802	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	-10	True	NA	-1	True	AATAAA	-30	NA	154516236	154506158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_147671.known	chrX	-	1521	10	FSM	ENSG00000071889.17	ENST00000369643.5	1521	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	24.6431319157546	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	23	True	NA	-13	True	AATAAA	-18	NA	154516116	154506170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515968
transcript_147675.known	chrX	-	1359	10	FSM	ENSG00000071889.17	ENST00000369641.7	1359	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	22.878638481462	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCCATTCCTCACGCC	-12	True	NA	NA	False	NA	NA	NA	154516238	154506534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_147676.known	chrX	-	1793	9	FSM	ENSG00000071889.17	ENST00000447601.7	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	11.3571288184999	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	-6	True	NA	-13	True	AATAAA	-18	NA	154516232	154506170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_147679.known	chrX	-	1817	9	FSM	ENSG00000071889.17	ENST00000434658.6	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	29.0817812384317	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACCCCTTAATAAAGTGA	-16	True	NA	-46	True	NA	NA	NA	154516242	154506203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_147682.known	chrX	-	1763	8	FSM	ENSG00000071889.17	ENST00000419205.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	22.5759489144478	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	-16	True	NA	-2	True	AATAAA	-29	NA	154516242	154506159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_147685.known	chrX	-	2223	13	FSM	ENSG00000160211.19	ENST00000393562.10	2223	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	9.24061085041941	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTCCCCTTGTCATT	-1	True	NA	-7	True	ATTAAA	-14	NA	154546846	154531390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
transcript_147686.known	chrX	-	1661	13	FSM	ENSG00000160211.19	ENST00000393564.6	1661	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	17.4186601729933	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCACCCACCTCCA	-4	True	NA	NA	False	NA	NA	NA	154547572	154531999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
transcript_147691.nic	chrX	+	898	4	ISM	ENSG00000269335.7	ENST00000692816.1	1223	5	249	1832	-3	-1832	5prime_fragment	FALSE	canonical	3	122	junction_3	11.4309521329882	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACAGTGTCTAGTTCTC	7	True	NA	NA	False	NA	NA	NA	154547634	154558904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_154547746_154551987_154552190_154556164_154556377_154558531
transcript_147696.known	chrX	+	2469	15	FSM	ENSG00000130826.18	ENST00000369550.10	2469	15	0	0	0	0	multi-exon	FALSE	canonical	3	944	junction_6	67.3960651064788	2775	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTATGTTTGTTTTCT	10	True	NA	25	True	ATTAAA	-36	NA	154762863	154777689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186_154776325_154776798
transcript_147698.known	chrX	-	2006	12	FSM	ENSG00000130830.15	ENST00000369534.8	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	7.10022697809696	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	-26	True	NA	0	True	AATAAA	-22	NA	154805485	154778683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
transcript_1477.nnic	chr1	+	1875	8	NIC	ENSG00000142655.13	novel	1922	9	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_3	34.9068731902238	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	NA	False	NA	21	True	AATAAA	-21	NA	10474867	10630758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_10475003_10495273_10495322_10536212_10536298_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_147706.known	chrX	-	791	6	FSM	ENSG00000185010.15	ENST00000423959.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.86781592116274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTCTGCCAGGTATGT	3	True	NA	NA	False	NA	NA	NA	155026940	154984700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154984804_154987236_154987306_154992935_154993149_154996972_154997096_154999478_154999601_155026779
transcript_147707.known	chrX	-	2620	5	FSM	ENSG00000185010.15	ENST00000330287.10	2620	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	4.60298815988049	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTGAGAATTGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	154886317	154835787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154837753_154860431_154860609_154861717_154861867_154863082_154863228_154886133
transcript_14771.known	chr1	-	344	1	FSM	ENSG00000238085.1	ENST00000437248.1	344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAAACCTCTTTTATAATG	70	False	NA	NA	False	NA	NA	NA	240998794	240998450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_240998400_240998800
transcript_147710.known	chrX	+	587	1	FSM	ENSG00000274183.2	ENST00000620016.2	587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATCTGCCCGCTTCAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	154884971	154885558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154885000_154885600
transcript_147711.known	chrX	+	1707	1	FSM	ENSG00000288722.1	ENST00000610495.2	1707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTTTGGTGTCCGT	-2	True	NA	NA	False	GATAAA	-20	NA	154886354	154888061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154886400_154888100
transcript_147713.known	chrX	+	6297	5	FSM	ENSG00000165775.18	ENST00000369498.8	6297	5	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	13.5346776836392	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGTTATTATTAACAC	1	True	NA	NA	False	ATTAAA	-15	NA	155026843	155060304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155027072_155033402_155033554_155046508_155046585_155051669_155051802_155054594
transcript_147715.known	chrX	+	871	5	FSM	ENSG00000165775.18	ENST00000456179.1	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	195.557376490891	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGGTATCTTGGT	6384	False	NA	NA	False	AATACA	-17	NA	155033425	155055106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155033554_155046508_155046585_155047368_155047392_155051669_155051802_155054594
transcript_147717.known	chrX	+	2846	12	FSM	ENSG00000185515.16	ENST00000369462.5	2846	12	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_7	98.0178765951977	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	-3	True	NA	10	True	AATAAA	-23	NA	155071502	155123074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_147722.known	chrX	+	2769	11	FSM	ENSG00000185515.16	ENST00000330045.12	2769	11	0	0	0	0	multi-exon	FALSE	canonical	2	189	junction_4	49.3060848171907	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTCAATGTCTTGG	2	True	NA	13	True	AATAAA	-26	NA	155071507	155123077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_147729.known	chrX	+	2694	10	FSM	ENSG00000185515.16	ENST00000453705.1	2694	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	95.3298367657145	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGATACTGAATAAAGTCT	26	True	NA	-28	True	AATGAA	-15	NA	155071531	155123036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155071655_155073373_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_14774.known	chr1	+	473	2	FSM	ENSG00000287516.1	ENST00000413994.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTATATCGATTGAAC	441	False	NA	13	True	AATAAA	-24	NA	241424397	241433492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241424550_241433171
transcript_147740.known	chrX	-	2184	5	FSM	ENSG00000214827.11	ENST00000369476.8	2184	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	6.28490254498827	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGATATGCCGCAGA	130	False	155071165	NA	False	AATAAA	-21	NA	155071136	155064033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155065400_155065485_155065538_155065618_155065790_155065905_155066058_155070693
transcript_147744.known	chrX	-	881	3	FSM	ENSG00000182712.16	ENST00000369484.8	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	40	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	130	False	155071165	-2	True	AATAAA	-18	NA	155071136	155061621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155061992_155063965_155064034_155070693
transcript_147745.nnic	chrX	-	650	3	NNC	ENSG00000182712.16	novel	881	3	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	101	242	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	91	False	NA	-2	True	AATAAA	-18	NA	155071175	155061621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_155061992_155063965_155064034_155070963
transcript_147747.known	chrX	-	864	3	FSM	ENSG00000182712.16	ENST00000369479.1	864	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	109.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATTTGGGTTTTGTAC	5898	False	NA	-8	True	AATAAA	-12	NA	155065368	155061627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155061992_155063965_155064034_155064936
transcript_147748.known	chrX	+	882	10	NNC	ENSG00000185515.16	novel	1101	11	NA	NA	-4	-1168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	124.854680961607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGAGACAAAATGGGGT	22	True	NA	-3	True	AAGAAA	-39	NA	155071527	155120150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_155071651_155072326_155072344_155073373_155073432_155077169_155077284_155078609_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119995
transcript_147749.known	chrX	+	954	11	NNC	ENSG00000185515.16	novel	2846	12	NA	NA	-4	-1168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	127.347124035056	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGAGACAAAATGGGGT	22	True	NA	-3	True	AAGAAA	-39	NA	155071527	155120150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077284_155078609_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119995
transcript_14775.nic	chr1	+	724	2	NIC	ENSG00000287516.1	novel	473	2	NA	NA	20	0	intron_retention	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTATATCGATTGAAC	355	False	NA	13	True	AATAAA	-24	NA	241424311	241433492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_241424715_241433171
transcript_147755.known	chrX	+	1616	6	FSM	ENSG00000155959.12	ENST00000286428.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_3	42.0970307741532	3159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTACTATGTTT	-2	True	NA	42	True	ATTAAA	-43	NA	155216459	155239841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155216576_155220182_155220308_155227234_155227302_155228383_155228483_155236228_155236368_155238771
transcript_147756.known	chrX	-	3413	2	FSM	ENSG00000155961.5	ENST00000369454.4	3413	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAAGTGTGTGTTATA	-14	True	NA	-6	True	AGTAAA	-23	NA	155264491	155258234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155261230_155264073
transcript_147768.known	chrX	-	3952	8	FSM	ENSG00000185973.12	ENST00000334398.8	3952	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	28.1519202230487	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCAGAAGTTACCACAT	-3	True	NA	NA	False	AATAAA	-24	NA	155612952	155489010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_147769.known	chrX	-	1248	7	FSM	ENSG00000185973.12	ENST00000369439.4	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	33.2949779329489	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTGAGATCTTTCT	72	False	NA	NA	False	AATAAA	-17	NA	155612877	155492534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155492701_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_147770.known	chrX	-	544	2	FSM	ENSG00000185973.12	ENST00000487422.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATACTTAATAGTGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	155545277	155524270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155524633_155545095
transcript_147771.known	chrX	-	581	2	FSM	ENSG00000185973.12	ENST00000461075.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATGGGTTTGTGAAT	11	True	NA	NA	False	NA	NA	NA	155612895	155612127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155612605_155612791
transcript_147773.known	chrX	+	2594	8	FSM	ENSG00000124333.16	ENST00000286448.12	2594	8	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	19.5281063796649	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	-1	True	NA	NA	False	AATAAA	-21	NA	155881344	155943769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_147776.known	chrX	+	742	8	FSM	ENSG00000124333.16	ENST00000479687.6	742	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	80.290543830338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGGATTTACATG	12	True	NA	NA	False	NA	NA	NA	155881357	155941909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889634_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_147777.known	chrX	+	658	7	FSM	ENSG00000124333.16	ENST00000460621.6	658	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	83.7967116830302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAGTTAAAAGCAATCC	32	True	NA	NA	False	AAGAAA	-42	NA	155881377	155941989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889548_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_147778.known	chrX	+	2496	7	FSM	ENSG00000124333.16	ENST00000262640.11	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	82.7615383026574	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	29	True	NA	NA	False	AATAAA	-21	NA	155881374	155943769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155939700_155939794_155941882
transcript_147779.known	chrX	+	696	7	FSM	ENSG00000124333.16	ENST00000488344.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	81.2412388438833	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGGAAAGAAGAAGTT	14	True	NA	NA	False	NA	NA	NA	155881359	155941944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889613_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_147784.known	chrX	-	1054	2	FSM	ENSG00000185203.12	ENST00000399966.9	1054	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	156016837	156014622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_156015501_156016661
transcript_147787.known	chrY	-	828	1	FSM	ENSG00000184895.8	ENST00000383070.2	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	469	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACTGGTATTTCATTT	-1	True	NA	-11	True	AATAAA	-17	NA	2787682	2786854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_2786900_2787700
transcript_14779.known	chr1	-	1791	10	FSM	ENSG00000091483.8	ENST00000366560.4	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_5	67.6550801975965	1062	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCTATGTTAATTGA	-22	True	NA	-16	True	AATAAA	-37	NA	241519755	241497602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
transcript_147790.known	chrY	+	811	7	FSM	ENSG00000129824.16	ENST00000430575.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	814.872314469506	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGCCACCAAACAG	47	False	NA	-27	True	NA	NA	NA	2841919	2866862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_2841974_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_147807.known	chrY	+	1189	7	FSM	ENSG00000129824.16	ENST00000250784.13	1189	7	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_1	382.874508016516	8388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCCCTTTTTCCTTGCT	0	True	NA	NA	False	ATTAAA	-19	NA	2841601	2867268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_2841628_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_147808.known	chrY	+	5113	8	FSM	ENSG00000067646.12	ENST00000383052.5	5113	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	6.13454587245254	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCAATACTAAGTTAACTC	139	False	NA	25	True	AATAAA	-41	NA	2935280	2982506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939_2978081_2978809
transcript_147809.nic	chrY	+	1758	7	ISM	ENSG00000067646.12	ENST00000383052.5	5113	8	-374	4458	-374	-5	5prime_fragment	FALSE	canonical	3	43	junction_3	5.05525029603437	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGACCTGATTCCAGGC	NA	False	NA	NA	False	AAGAAA	-3	NA	2934906	2978048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrY_+_2935447_2953908_2953998_2961073_2961647_2975094_2975245_2975510_2975655_2976669_2976823_2977939
transcript_147834.nnic	chrY	+	1454	6	Intergenic	novelGene_94	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	1.72046505340853	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTGTTTGAGGCTACC	NA	False	NA	NA	False	AATAAA	-20	NA	6749061	6812182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrY_+_6749217_6759579_6759672_6762015_6762105_6807118_6807206_6808011_6808086_6811225
transcript_147846.nnic	chrY	+	1097	3	NNC	ENSG00000092377.15	novel	2312	18	NA	NA	135	-175231	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	16	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCCTCTAATCCCAG	138	False	NA	NA	False	NA	NA	NA	6910831	6916452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_6910983_6912087_6912173_6915591
transcript_147847.nnic	chrY	+	609	3	Intergenic	novelGene_95	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCGTTTTTTAAATTTC	-17	True	NA	NA	False	ATTAAA	-10	NA	7274780	7290746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrY_+_7275066_7285027_7285120_7290514
transcript_147850.known	chrY	-	2183	4	FSM	ENSG00000239893.2	ENST00000651148.1	2183	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTCTTTTGGCCAACTC	NA	False	NA	-47	True	NA	NA	NA	8126293	8068444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_8070118_8076989_8077175_8111849_8111965_8126083
transcript_147851.nnic	chrY	+	1563	4	NNC	ENSG00000227204.1	novel	1059	9	NA	NA	12720	34591	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAATGTGAATACCTGT	NA	False	NA	NA	False	AATAAA	-18	NA	8139849	8178794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_8140087_8140799_8140961_8143398_8143488_8177718
transcript_147878.nnic	chrY	-	792	5	NNC	ENSG00000206159.12	novel	534	4	NA	NA	-111	-3	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	52.3993082015402	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTGCCCCCATTCT	NA	False	NA	-16	True	AATAAA	-13	NA	12421698	12378536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_12378750_12382178_12382328_12406795_12406938_12420315_12420455_12421549
transcript_147892.nnic	chrY	-	654	4	NNC	ENSG00000206159.12	novel	2203	10	NA	NA	-53	28031	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	52.9926619658064	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGTGTCTTATATTCC	NA	False	NA	0	True	AATAAA	-17	NA	12421640	12326384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_12326667_12406795_12406938_12420315_12420455_12421549
transcript_147898.nic	chrY	-	701	4	NIC	ENSG00000206159.12	novel	639	3	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	47.4856703531591	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACGCATAGCTTCTG	NA	False	NA	-10	True	ATTAAA	-20	NA	12421613	12354415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_-_12354772_12406795_12406938_12420315_12420455_12421549
transcript_147906.nnic	chrY	-	567	4	FSM	ENSG00000206159.12	ENST00000382965.3	534	4	-38	5	-35	-3	multi-exon	FALSE	canonical	3	55	junction_1	39.7184535896799	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTGCCCCCATTCT	NA	False	NA	-16	True	AATAAA	-13	NA	12421622	12378536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421549
transcript_147922.known	chrY	-	639	3	FSM	ENSG00000206159.12	ENST00000382966.5	639	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	57	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACGCATAGCTTCTG	1129	False	NA	-10	True	ATTAAA	-20	NA	12420456	12354415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12354772_12406795_12406938_12420315
transcript_147923.known	chrY	-	623	3	FSM	ENSG00000206159.12	ENST00000357871.6	623	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	69.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCATTGATCTGGAAAT	1129	False	NA	NA	False	AATAAA	-39	NA	12420456	12402250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12402591_12406795_12406938_12420315
transcript_147925.known	chrY	+	10036	46	FSM	ENSG00000114374.13	ENST00000338981.7	10036	46	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_1	58.5203309611495	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	109	False	NA	15	True	AATAAA	-12	NA	12701230	12860839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_12702056_12708633_12708694_12709387_12709544_12720588_12720738_12722107_12722188_12725112_12725226_12726574_12726794_12735611_12735728_12735997_12736250_12736410_12736550_12738156_12738310_12739524_12739630_12757191_12757399_12758505_12758643_12760483_12760618_12771067_12771156_12773582_12773926_12775470_12775567_12776648_12776861_12778018_12778260_12778605_12778756_12779525_12779647_12786202_12786334_12786521_12786801_12790406_12790533_12791498_12791625_12793031_12793202_12810178_12810288_12810671_12810819_12811634_12811782_12812829_12813053_12816123_12816345_12818419_12818611_12833687_12833862_12837910_12838053_12839863_12840615_12841009_12841134_12842239_12842466_12843063_12843194_12846332_12846519_12846932_12847154_12847238_12847328_12856339_12856497_12856632_12856846_12857565_12857662_12859278
transcript_147936.known	chrY	+	2410	2	FSM	ENSG00000114374.13	ENST00000471409.1	2410	2	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTCCTGTGGTGTGTT	NA	False	NA	15	True	AATAAA	-12	NA	12856812	12860839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_12857662_12859278
transcript_147937.known	chrY	+	5284	4	FSM	ENSG00000114374.13	ENST00000440408.5	5284	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	186.269219739124	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTGTCTAAAGCAGTG	NA	False	NA	NA	False	AATAAA	-44	NA	12662333	12692233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463
transcript_147938.known	chrY	+	882	4	FSM	ENSG00000114374.13	ENST00000417071.1	882	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	258.847445419112	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACTTTTTAAATTAA	31	False	NA	-12	True	NA	NA	NA	12662536	12688255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687684
transcript_14794.known	chr1	-	1816	3	FSM	ENSG00000054277.14	ENST00000490673.5	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	37.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTTTTGTTATAGGGG	6	True	NA	0	True	AATAAA	-26	NA	241640355	241593601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_241594692_241597745_241597998_241639881
transcript_147942.known	chrY	-	1153	3	FSM	ENSG00000286009.2	ENST00000652216.1	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACTTGCTCATGATTG	NA	False	NA	4	True	ATTAAA	-24	NA	12663474	12661308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12662122_12662525_12662752_12663360
transcript_147943.known	chrY	-	1210	3	FSM	ENSG00000286009.2	ENST00000662422.1	1210	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCCACTTGCTCATGA	NA	False	NA	1	True	ATTAAA	-21	NA	12663474	12661311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12662125_12662525_12662752_12663303
transcript_147945.known	chrY	-	1076	3	FSM	ENSG00000286009.2	ENST00000651143.2	1076	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAGCCCCACTTGCTCA	NA	False	NA	-2	True	ATTAAA	-18	NA	12663474	12661314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12662125_12662656_12662752_12663303
transcript_147946.known	chrY	-	1023	3	FSM	ENSG00000286009.2	ENST00000656670.1	1023	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAGCCCCACTTGCTCA	NA	False	NA	-2	True	ATTAAA	-18	NA	12663478	12661314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12662125_12662656_12662752_12663360
transcript_147949.known	chrY	+	4408	17	FSM	ENSG00000067048.17	ENST00000336079.8	4408	17	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_9	39.1937794012009	1075	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	-8	True	NA	18	True	AATAAA	-14	NA	12904867	12920478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_14795.nnic	chr1	+	1313	2	Genic_Genomic	ENSG00000287513.1	novel	1281	1	NA	NA	-735	-3	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTCGCTATATTTTTTCC	NA	False	NA	NA	False	AATAAA	-25	NA	241639819	241641832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_241640024_241640723
transcript_14796.known	chr1	-	920	2	FSM	ENSG00000203668.3	ENST00000638121.1	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAACAGAAGAAGCCAT	-3	True	NA	NA	False	AAGAAA	-27	NA	241640254	241635526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_241636074_241639881
transcript_14797.known	chr1	+	1281	1	FSM	ENSG00000287513.1	ENST00000653014.1	1281	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGCTATATTTTTTCCTAT	213	False	NA	NA	False	AATAAA	-28	NA	241640554	241641835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241640600_241641800
transcript_14798.known	chr1	+	3449	16	FSM	ENSG00000174371.17	ENST00000366548.8	3449	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	48.4268061672	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAGGAAATCACTGTG	-8	True	NA	NA	False	AGTAAA	-15	NA	241848203	241889939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241848354_241848730_241849028_241849111_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_147980.nic	chrY	-	1733	8	ISM	ENSG00000183878.16	ENST00000329134.9	4325	20	637	70105	0	13	5prime_fragment	FALSE	canonical	3	51	junction_1	9.61928335401853	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGGCATGGTGGCTCAT	-45	True	NA	-4	True	AATAAA	-18	NA	13480033	13393138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrY_-_13393894_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_147981.nnic	chrY	-	1098	8	NNC	ENSG00000183878.16	novel	1539	7	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	25.6618513019793	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTACCTATTTGAGTCT	-45	True	NA	NA	False	ATTAAA	-16	NA	13480033	13396311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_13396432_13396917_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_147985.known	chrY	-	1539	7	FSM	ENSG00000183878.16	ENST00000382893.2	1539	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	5.87839736284947	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTCTATAATTGAAT	10	True	NA	NA	False	ATTAAA	-26	NA	13479978	13396301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_147991.nnic	chrY	-	870	4	NNC	ENSG00000183878.16	novel	3391	19	NA	NA	39763	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	38.1604798479031	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTGTCCACGTTCCTC	9669	False	NA	-3	True	AATAAA	-24	NA	13296366	13234579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_13234827_13251016_13251188_13260277_13260405_13296041
transcript_147995.nic	chrY	-	1775	4	ISM	ENSG00000183878.16	ENST00000382893.2	1539	7	-55	51683	0	31057	5prime_fragment	FALSE	canonical	3	65	junction_1	6.12825877028341	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGTACATTACCCAAGG	-45	True	NA	NA	False	AATAAA	-12	NA	13480033	13447984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrY_-_13449067_13470120_13470230_13479253_13479318_13479513
transcript_147998.known	chrY	-	686	2	FSM	ENSG00000183878.16	ENST00000479713.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACCGGGCTAAACCGGG	-5	True	NA	NA	False	NA	NA	NA	13479923	13479041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_13479318_13479513
transcript_148.known	SIRV1	-	744	3	FSM	SIRV1A	SIRV107	744	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11643	10647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_10792_10882_11243_11403
transcript_148008.known	chrY	+	1337	2	FSM	ENSG00000154620.6	ENST00000284856.4	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	-4	True	NA	5	True	AATAAA	-18	NA	13703898	13706024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_13704436_13705224
transcript_14801.nic	chr1	+	4104	15	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-52	708	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	30.8439952148927	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTGTCTTCAAATATTTAT	165	False	NA	8	True	AATAAA	-19	NA	241848151	241890647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_148012.nnic	chrY	+	1548	2	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-331	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	77	False	NA	5	True	AATAAA	-18	NA	13703567	13706024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_13704436_13705344
transcript_148013.known	chrY	-	510	2	FSM	ENSG00000129864.7	ENST00000250825.5	510	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	-1	False	NA	NA	False	AATAAA	-21	NA	13986473	13985771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_13986147_13986338
transcript_148014.known	chrY	+	540	2	FSM	ENSG00000129862.7	ENST00000250823.5	540	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	-1	True	NA	NA	False	AATAAA	-21	NA	14056226	14056958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_14056392_14056583
transcript_148016.nnic	chrY	+	1346	6	NNC	ENSG00000165246.15	novel	7368	7	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	31.6518561856963	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	-17	True	NA	NA	False	AATAAA	-23	NA	14522607	14733549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_14522942_14584172_14584291_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_148018.nic	chrY	+	1263	5	NIC	ENSG00000165246.15	novel	7368	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	24.5051015096857	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	NA	False	NA	NA	False	AATAAA	-23	NA	14522572	14733549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_14802.nic	chr1	+	3203	15	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	30.8439952148927	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	165	False	NA	21	True	AATACA	-19	NA	241848151	241889746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_148024.nic	chrY	+	1280	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	-206	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	24.9449393665328	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	783	False	NA	NA	False	AATAAA	-23	NA	14524322	14733549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14524709_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_148025.nnic	chrY	+	1105	5	NNC	ENSG00000165246.15	novel	722	4	NA	NA	-182	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	31.9482002622996	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	807	False	NA	NA	False	AATAAA	-23	NA	14524346	14733549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_14524558_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_148027.nic	chrY	+	1039	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	218	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	30.3685692781204	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	0	True	NA	NA	False	AATAAA	-23	NA	14524791	14733549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14524937_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_148028.nic	chrY	+	1203	4	NIC	ENSG00000165246.15	novel	7368	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	27.6526068692749	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	NA	False	NA	NA	False	AATAAA	-23	NA	14522572	14733549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14522942_14622008_14622592_14723116_14723270_14733451
transcript_14803.known	chr1	+	2899	14	FSM	ENSG00000174371.17	ENST00000518483.5	2899	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	50.4032261576637	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	64	False	NA	21	True	AATACA	-19	NA	241848830	241889746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889466
transcript_148032.nnic	chrY	+	665	4	NIC	ENSG00000165246.15	novel	7194	7	NA	NA	-174	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	35.2167889254858	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	815	False	NA	NA	False	AATAAA	-23	NA	14524354	14733549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14524709_14719458_14719519_14723116_14723270_14733451
transcript_148036.known	chrY	+	540	2	FSM	ENSG00000165246.15	ENST00000481089.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGAGGCGGTTTCAGCC	16	True	NA	NA	False	NA	NA	NA	14524528	14622368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_14524709_14622008
transcript_148038.nnic	chrY	+	585	4	Antisense	novelGene_ENSG00000252689.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGTGTGACGTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	16137126	16160373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrY_+_16137299_16154906_16154990_16156077_16156163_16160128
transcript_14804.known	chr1	+	3192	14	FSM	ENSG00000174371.17	ENST00000348581.9	3192	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	32.0027735484426	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCTAGAGGAAATCACTG	519	False	NA	NA	False	AGTAAA	-13	NA	241848730	241889937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_14805.known	chr1	-	1207	4	FSM	ENSG00000197769.6	ENST00000357246.4	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.05480466765633	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAGGGCTCGGTACTAG	1	True	NA	NA	False	NA	NA	NA	241999098	241995489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_241996386_241998513_241998621_241998775_241998832_241998950
transcript_14807.known	chr1	-	8900	10	FSM	ENSG00000180287.17	ENST00000536534.7	8900	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	2.83278861866266	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAACCTGTGTGTCTGTTCT	-3	True	NA	NA	False	AATAAA	-16	NA	242524697	242082985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_242090111_242100667_242100783_242107670_242107840_242113889_242114027_242124467_242124666_242219987_242220116_242265336_242265449_242288361_242288531_242348105_242348243_242524087
transcript_148103.nnic	chrY	-	651	4	NIC	ENSG00000176728.10	novel	827	5	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	21.2968437932844	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	1471	False	NA	1	True	AATAAA	-17	NA	19076020	18872500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_-_18872835_18877067_18877206_18932742_18932842_19075940
transcript_148106.known	chrY	-	615	4	FSM	ENSG00000176728.10	ENST00000670354.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	15.4560308258262	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	-7	True	NA	1	True	AATAAA	-17	NA	19076008	18872500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_19068723_19068799_19075940
transcript_148107.known	chrY	-	593	4	FSM	ENSG00000176728.10	ENST00000670243.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.86676384819	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	3	True	NA	1	True	AATAAA	-17	NA	19075998	18872500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_19073498_19073562_19075940
transcript_148119.nnic	chrY	-	409	4	NNC	ENSG00000176728.10	novel	615	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.0377492776186	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	1479	False	NA	-22	True	AATAAA	-21	NA	19076012	18932698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_18932842_18933356_18933476_19068723_19068799_19075940
transcript_14812.known	chr1	+	766	3	FSM	ENSG00000224525.2	ENST00000421878.2	766	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTGGTC	13	False	NA	NA	False	ATTAAA	-17	NA	242203554	242210827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_242203744_242209217_242209336_242210368
transcript_148124.known	chrY	-	615	4	FSM	ENSG00000176728.10	ENST00000651286.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.90668171555645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTGTTTACTTT	1480	False	NA	-1	True	AATAAA	-31	NA	19076011	18932435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18932842_19068723_19068799_19073498_19073562_19075940
transcript_148128.known	chrY	-	541	3	FSM	ENSG00000176728.10	ENST00000667262.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	22.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTGTATCAGGTGAC	1480	False	NA	-1	True	AATAAA	-15	NA	19076011	18872502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_19075940
transcript_148132.nnic	chrY	-	615	3	NNC	ENSG00000176728.10	novel	615	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	13	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTGTTTACTTT	1461	False	NA	-1	True	AATAAA	-31	NA	19076030	18932435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_18932842_18933356_18933476_19075940
transcript_148134.known	chrY	-	978	3	FSM	ENSG00000176728.10	ENST00000669869.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	15.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTTGCATGTCATTT	-7	True	NA	NA	False	AATAAA	-11	NA	19076008	18932006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18932842_19068723_19068799_19075940
transcript_148138.nnic	chrY	-	422	3	NNC	ENSG00000176728.10	novel	615	4	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	13	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	1391	False	NA	-22	True	AATAAA	-21	NA	19076100	18932698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_18932842_18933356_18933476_19075940
transcript_148149.nnic	chrY	-	223	2	NIC	ENSG00000176728.10	novel	515	2	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	1471	False	NA	-22	True	AATAAA	-21	NA	19076020	18932698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_-_18932842_19075940
transcript_148150.known	chrY	-	827	5	FSM	ENSG00000176728.10	ENST00000664804.1	827	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.597329924046	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	1462	False	NA	1	True	AATAAA	-17	NA	19076029	18872500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_18932650_18932842_19068723_19068799_19075940
transcript_148151.nnic	chrY	-	1394	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACAGCAGTGAAGCCA	NA	False	NA	NA	False	AATAAA	-25	NA	18690346	18682098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrY_-_18683112_18684230_18684326_18690060
transcript_148154.nnic	chrY	-	1270	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGAAAAAAATAGATAGTT	NA	False	NA	NA	False	AAAAAG	-7	NA	18690346	18682222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrY_-_18683112_18684230_18684326_18690060
transcript_148161.nnic	chrY	-	600	4	NNC	ENSG00000215580.12	novel	352	4	NA	NA	-147	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	0.942809041582063	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGTCTAATTTTTATA	NA	False	NA	0	True	AATAAA	-23	NA	19567239	19555389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_19555555_19557229_19557290_19558023_19558141_19566981
transcript_148162.nnic	chrY	-	584	4	FSM	ENSG00000215580.12	ENST00000693243.1	352	4	-232	0	-147	0	multi-exon	FALSE	canonical	3	8	junction_3	0.816496580927726	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGTCTAATTTTTATA	NA	False	NA	0	True	AATAAA	-23	NA	19567239	19555389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_19555555_19557229_19557290_19558039_19558141_19566981
transcript_148165.nnic	chrY	-	524	3	NIC	ENSG00000215580.12	novel	352	4	NA	NA	-147	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGTCTAATTTTTATA	NA	False	NA	0	True	AATAAA	-23	NA	19567239	19555389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_-_19555555_19558039_19558141_19566981
transcript_148179.nnic	chrY	+	1039	6	NNC	ENSG00000131002.13	novel	1000	5	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	36.6584233157947	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	19567320	19590419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_19567483_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_14818.nic	chr1	-	1398	7	ISM	ENSG00000143702.16	ENST00000366544.5	6805	19	-464	74652	-437	1534	5prime_fragment	FALSE	canonical	0	0	junction_3	66.5150358941495	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAAGCTGGAACATCAG	-3	True	NA	NA	False	AAAAAG	-37	NA	243255785	243199079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_14819.known	chr1	-	608	4	FSM	ENSG00000143702.16	ENST00000522995.1	608	4	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_3	76.8505042273634	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATATGATATCCTTAAA	7	True	NA	NA	False	NA	NA	NA	243255348	243211894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_243211965_243221723_243221814_243225175_243225322_243255046
transcript_148194.known	chrY	+	1000	5	FSM	ENSG00000131002.13	ENST00000407724.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.0396150079408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	NA	False	NA	-19	True	NA	NA	NA	19567312	19590247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567483_19587209_19587508_19588369_19588651_19589526_19589613_19590082
transcript_148202.nic	chrY	+	1485	5	ISM	ENSG00000131002.13	ENST00000445715.6	1574	10	-51	9959	18	0	5prime_fragment	FALSE	canonical	3	16	junction_3	30.1247406627841	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTATTTGTTTTTATT	-27	True	NA	13	True	AATAAA	-18	NA	19567330	19594161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrY_+_19567483_19587209_19587508_19589520_19589613_19591779_19591960_19593398
transcript_148219.known	chrY	+	832	4	FSM	ENSG00000131002.13	ENST00000447520.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	17.6823829464998	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	24	True	NA	NA	False	AATAAA	-20	NA	19567381	19590423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082
transcript_14822.known	chr1	-	582	3	FSM	ENSG00000143702.16	ENST00000523581.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	29.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCCCATATTCCAAAGAA	13	True	NA	NA	False	AATAGA	-9	NA	243255216	243221554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_243221814_243225175_243225322_243255039
transcript_148223.known	chrY	+	2098	4	FSM	ENSG00000131002.13	ENST00000459719.6	2098	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	15.8394724940223	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTATTCTCTCATGTG	-8	True	NA	NA	False	AATAAA	-15	NA	19567349	19590418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082
transcript_148226.nic	chrY	+	977	4	FSM	ENSG00000131002.13	ENST00000686158.1	930	4	-51	4	8	0	multi-exon	FALSE	canonical	3	63	junction_2	17.2497987105808	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	19567320	19590419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082
transcript_14823.known	chr1	+	2581	18	FSM	ENSG00000054282.16	ENST00000366541.8	2581	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	17.8119745111585	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-22	True	NA	23	True	AATAAA	-16	NA	243256040	243500091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
transcript_148230.nic	chrY	+	1932	3	FSM	ENSG00000131002.13	ENST00000686905.1	1911	3	-21	0	16	0	multi-exon	FALSE	canonical	3	69	junction_2	15.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGATCAGCAGTTTT	-29	True	NA	11	True	AATAAA	-16	NA	19567328	19589849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567483_19587209_19587508_19588369
transcript_148241.nic	chrY	+	1119	2	ISM	ENSG00000131002.13	ENST00000686905.1	1911	3	-37	1691	0	-1689	5prime_fragment	FALSE	canonical	3	100	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGGTAATATATAAAGTA	NA	False	NA	NA	False	NA	NA	NA	19567312	19588158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrY_+_19567483_19587209
transcript_148251.known	chrY	+	1339	7	FSM	ENSG00000198692.10	ENST00000361365.7	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	51.3530806173192	4962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTCAGACTGTCTCT	17	True	NA	4	True	AATAAA	-14	NA	20575775	20593154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20584473_20584525_20588023_20588106_20589483_20589576_20592340
transcript_148263.known	chrY	+	746	6	FSM	ENSG00000198692.10	ENST00000382772.3	746	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	233.069603337715	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	-20	True	NA	14	True	AATAAA	-26	NA	20575793	20592630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20588023_20588106_20589483_20589576_20592340
transcript_14835.nnic	chr1	+	1694	10	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	0	1627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	21.542951641595	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTATTCAATTCTGC	-29	True	NA	4	True	AATAAA	-14	NA	243256033	243318522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243318036
transcript_14840.nic	chr1	+	1285	9	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	0	233	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	29.7772983999556	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATAAGAATCACTA	-29	True	NA	NA	False	AAAAAG	-11	NA	243256033	243305320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243293398_243293495_243304712_243304778_243305011
transcript_14843.nnic	chr1	+	1594	9	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	-29	1627	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	24.2886290267689	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTATTCAATTCTGC	-58	True	NA	4	True	AATAAA	-14	NA	243256004	243318522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243304712_243304778_243307988_243308178_243316754_243316894_243318036
transcript_14846.nic	chr1	+	1189	8	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	0	233	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	21.8417312612759	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATAAGAATCACTA	-29	True	NA	NA	False	AAAAAG	-11	NA	243256033	243305320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243305011
transcript_14850.nic	chr1	+	1060	7	NIC	ENSG00000054282.16	novel	2581	18	NA	NA	0	233	combination_of_known_junctions	FALSE	canonical	3	9	junction_6	25.4476587004253	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATAAGAATCACTA	-29	True	NA	NA	False	AAAAAG	-11	NA	243256033	243305320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243304712_243304778_243305011
transcript_14859.nnic	chr1	+	626	4	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1.88561808316413	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-10	True	NA	23	True	AATAAA	-16	NA	243487751	243500091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243487822_243489013_243489141_243497866_243497960_243499755
transcript_14860.nnic	chr1	+	683	4	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	4.98887651569859	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-10	True	NA	23	True	AATAAA	-16	NA	243487751	243500091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243487879_243489013_243489141_243497866_243497960_243499755
transcript_14861.nic	chr1	+	398	3	ISM	ENSG00000054282.16	ENST00000366541.8	2581	18	10	229059	10	0	5prime_fragment	FALSE	canonical	3	68	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCGTCAAGAAGAAGAAAAA	-12	True	NA	NA	False	NA	NA	NA	243256050	243271032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_243256241_243270104_243270258_243270977
transcript_14864.nnic	chr1	+	761	3	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	8673	1627	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGGCTATTCAATTCTGC	9379	False	NA	4	True	AATAAA	-14	NA	243316456	243318522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243316593_243316754_243316894_243318036
transcript_14866.nnic	chr1	+	533	3	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	27	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	-10	True	NA	23	True	AATAAA	-16	NA	243487751	243500091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243487822_243489013_243489141_243499755
transcript_14867.known	chr1	+	525	3	FSM	ENSG00000054282.16	ENST00000497459.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	21	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTGTAATGTTTC	-14	True	NA	21	True	AATAAA	-14	NA	243487814	243500089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_243487879_243489013_243489141_243499755
transcript_14869.known	chr1	+	3740	2	FSM	ENSG00000179456.10	ENST00000622512.1	3740	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTTCTTGTGTGTATTT	13	False	NA	11	True	AATAAA	-13	NA	244048938	244057472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244048994_244053787
transcript_14873.known	chr1	-	2555	13	FSM	ENSG00000035687.10	ENST00000366535.4	2555	13	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_9	42.7436642478547	1373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCGTATTGTGTTTT	7	True	NA	-2	True	ATTAAA	-21	NA	244451909	244408493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_244409639_244411286_244411437_244415980_244416079_244417627_244417753_244418759_244418915_244420169_244420297_244422834_244422917_244423952_244424061_244424320_244424388_244432544_244432596_244436824_244436894_244437665_244437769_244451634
transcript_14879.known	chr1	+	4017	5	FSM	ENSG00000121644.19	ENST00000302550.16	4017	5	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_3	84.4345160464605	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	20	True	NA	NA	False	ATTAAA	-19	NA	244653125	244709033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244653356_244686596_244686670_244689248_244689343_244691878_244692021_244705555
transcript_1488.nnic	chr1	+	393	3	NNC	ENSG00000142655.13	novel	637	6	NA	NA	-82	-16277	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	51.5	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTAGTGACAGGGT	NA	False	NA	NA	False	AATAAA	-21	NA	10474867	10520012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_10475003_10495273_10495322_10519802
transcript_14881.known	chr1	+	859	4	FSM	ENSG00000121644.19	ENST00000263831.11	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	374.65806633071	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGGCGCAGGAGGGAG	-3	True	NA	NA	False	NA	NA	NA	244653102	244705951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244653356_244686596_244686670_244691883_244692021_244705555
transcript_14883.known	chr1	+	1126	2	FSM	ENSG00000121644.19	ENST00000484738.1	1126	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTGAGTCGTGGGAA	20	True	NA	4	True	AATAAA	-14	NA	244653125	244656521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244654026_244656295
transcript_14884.known	chr1	+	563	1	FSM	ENSG00000282317.1	ENST00000632004.1	563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCTGCTTTTTTATA	NA	False	NA	NA	False	AATACA	-15	NA	244731023	244731586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244731000_244731600
transcript_14885.known	chr1	-	6867	14	FSM	ENSG00000153187.20	ENST00000640218.2	6867	14	0	0	0	0	multi-exon	FALSE	canonical	2	1162	junction_13	1091.4602454765	3197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGTTGGAGTGACCTTT	-1	True	NA	-3	True	ATTAAA	-19	NA	244864543	244850296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618_244862731_244863616
transcript_14888.known	chr1	-	3207	13	FSM	ENSG00000153187.20	ENST00000440865.2	3207	13	0	0	0	0	multi-exon	FALSE	canonical	2	3117	junction_4	639.755829073353	3254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATTCATTTTACT	1463	False	NA	-41	True	AAGAAA	-37	NA	244863106	244853405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618
transcript_14898.known	chr1	+	568	5	FSM	ENSG00000203667.10	ENST00000366528.3	568	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	693.008477581624	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAAGTAAATAAAGTTT	46	False	NA	-6	True	CATAAA	-24	NA	244835615	244843252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244835757_244836484_244836521_244841943_244842059_244842194_244842259_244843040
transcript_14910.known	chr1	+	1005	3	FSM	ENSG00000203667.10	ENST00000391839.6	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	527	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAAAATATTATTTAAAA	-4	True	NA	94	True	NA	NA	NA	244835655	244843880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244835757_244842194_244842259_244843040
transcript_14911.known	chr1	+	2290	4	FSM	ENSG00000203667.10	ENST00000498262.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	657.901883937787	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	-1	True	NA	9	True	AATAAA	-17	NA	244835658	244845057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244835757_244841943_244842059_244842198_244842259_244843040
transcript_14912.known	chr1	+	535	1	FSM	ENSG00000273175.1	ENST00000610145.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAAGTTTTCTGTAGCT	55	False	NA	NA	False	AATAAA	-14	NA	244864737	244865272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244864700_244865300
transcript_14917.known	chr1	+	1233	8	FSM	ENSG00000203666.13	ENST00000366523.6	1418	8	187	-2	-113	2	multi-exon	FALSE	canonical	0	0	junction_1	75.1643098111581	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	90	False	NA	4	True	AATAAA	-14	NA	244969868	245087839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970044_244970328_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_14921.known	chr1	+	860	8	FSM	ENSG00000203666.13	ENST00000366521.7	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	74.3329520139086	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTATTTATTTAAAAAC	-6	True	NA	NA	False	TTTAAA	-36	NA	244970355	245087556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_14926.known	chr1	+	6167	8	FSM	ENSG00000203666.13	ENST00000366522.6	6167	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	85.4481582897024	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTAGGGAAGTTTTT	-2	True	NA	NA	False	AGTAAA	-7	NA	244969981	245127164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_14945.known	chr1	+	906	6	FSM	ENSG00000203666.13	ENST00000473686.5	906	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	65.2686754883229	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGTGGAAGGTGATT	30	False	NA	18	True	AATGAA	-37	NA	244970350	245087794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_14949.known	chr1	+	1201	6	FSM	ENSG00000203666.13	ENST00000497591.5	1201	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	90	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAATCACTTCAATGT	149	False	NA	23	True	AATAAA	-35	NA	244970285	245091806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245091026
transcript_1495.known	chr1	-	6035	6	FSM	ENSG00000160049.12	ENST00000377038.8	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	118.354383104302	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTCAAGCTTTTTT	445	False	10472552	-14	True	AATAAA	-33	NA	10472529	10456521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_10461703_10463057_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_14950.known	chr1	+	1389	6	FSM	ENSG00000203666.13	ENST00000487845.5	1389	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	89.4507685825002	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCCTTCTGTGTCTGG	-5	True	NA	33	True	CATAAA	-15	NA	244970389	245122991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_14958.known	chr1	+	550	6	FSM	ENSG00000203666.13	ENST00000425550.5	550	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	83.282651254628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTATGTCTTCCTACT	3860	False	NA	NA	False	AATAAA	-16	NA	245017241	245086961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245086759
transcript_14959.known	chr1	+	342	3	FSM	ENSG00000203666.13	ENST00000479260.1	342	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAAAGTCGGCTTTG	NA	False	NA	NA	False	TTTAAA	-15	NA	245002152	245030831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_245002233_245017241_245017327_245030654
transcript_1496.known	chr1	-	1403	5	FSM	ENSG00000160049.12	ENST00000377036.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	55.599010782567	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTGGTGTTGTAAG	17	True	NA	-9	True	AGTAAA	-15	NA	10472488	10462467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_14969.known	chr1	-	1209	6	FSM	ENSG00000185420.19	ENST00000403792.7	1209	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	89.5825875937953	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTCATTCCTAGTGTTA	5	True	NA	NA	False	TATAAA	-45	NA	246507312	246325812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246326396_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
transcript_14978.known	chr1	-	1042	8	FSM	ENSG00000185420.19	ENST00000470510.5	1042	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	93.4702833929106	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCATCTGGTAATTG	NA	False	NA	-22	True	AATAAA	-18	NA	245929937	245749350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_245749665_245764040_245764150_245814341_245814416_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869
transcript_14981.known	chr1	-	1784	8	FSM	ENSG00000162851.8	ENST00000366514.5	1784	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	14.6133849743365	1060	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-5	True	NA	NA	False	ATTAAA	-17	NA	246566261	246540560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
transcript_14982.known	chr1	+	5127	11	FSM	ENSG00000162852.14	ENST00000366513.9	5127	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	14.2017604542536	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCCTTATTTTGTTTTT	-2	True	NA	26	True	AATAAA	-28	NA	246566455	246668595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_246566664_246591511_246591942_246621428_246621635_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138_246648038_246660198_246660335_246665699
transcript_14987.nic	chr1	+	819	2	ISM	ENSG00000162852.14	ENST00000366511.1	645	4	-174	41951	-104	-41951	5prime_fragment	FALSE	canonical	3	118	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTTTACTGTCCTGC	-3	True	NA	NA	False	ATTAAA	-22	NA	246566339	246592006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_246566664_246591511
transcript_14991.known	chr1	+	2141	12	FSM	ENSG00000143653.10	ENST00000366510.4	2141	12	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_8	29.2357191245106	454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGTTCATTACCTAA	29	True	NA	NA	False	AATAAA	-19	NA	246724408	246768137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_246724613_246726891_246727005_246735974_246736056_246740171_246740302_246744075_246744126_246758225_246758357_246759033_246759152_246759956_246760077_246760170_246760228_246764245_246764358_246766057_246766140_246767194
transcript_14993.nic	chr1	-	1878	4	ISM	ENSG00000153207.16	ENST00000366508.5	8751	36	80545	1444	-969	420	3prime_fragment	FALSE	canonical	3	231	junction_1	10.3708994574027	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTTGTGTCTTGGATTT	NA	False	NA	-4	True	AATAAA	-15	NA	246850818	246840541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614
transcript_14994.known	chr1	+	1220	3	FSM	ENSG00000227953.7	ENST00000670093.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGAATCGTGATAGCA	NA	False	NA	NA	False	NA	NA	NA	246789103	246792280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_246789699_246790445_246790847_246792056
transcript_14995.known	chr1	-	355	3	FSM	ENSG00000153207.16	ENST00000498601.1	355	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	108.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAATTCGGCTGATTTC	NA	False	NA	NA	False	AAAAAG	-24	NA	246849849	246840961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246840999_246842693_246842777_246849614
transcript_14996.nic	chr1	-	1421	3	ISM	ENSG00000153207.16	ENST00000366508.5	8751	36	80545	3596	-969	-1732	internal_fragment	FALSE	canonical	3	231	junction_2	11	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGACTTTCTGTTCTGTT	NA	False	NA	1	True	AAAACA	-15	NA	246850818	246842693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_246842777_246843794_246843929_246849614
transcript_14997.known	chr1	+	2600	6	FSM	ENSG00000227953.7	ENST00000421003.5	2600	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.31516738055805	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGCGTAAGAAGTTAAC	NA	False	NA	5	True	AATAAA	-17	NA	246776012	246792385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_246777103_246780383_246780584_246781478_246781628_246789616_246789699_246790445_246791196_246792056
transcript_14998.nnic	chr1	-	504	4	NIC	ENSG00000197472.15	novel	885	6	NA	NA	-3	17659	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	60.0499791840097	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCAGGTGGTT	-6	True	NA	NA	False	ATTAAA	-18	NA	247008060	246967663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_246967793_246999347_246999441_246999947_247000075_247007905
transcript_15.known	ERCC-00040	+	728	1	FSM	ERCC-00040A	DQ883661	728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00040_+_0_700
transcript_150.known	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4568	junction_1	920.380718326208	4238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
transcript_15009.known	chr1	-	826	6	FSM	ENSG00000197472.15	ENST00000487338.6	826	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	59.3767631317168	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTATTTCTGATGAATA	NA	False	NA	-40	True	ATTAAA	-15	NA	247008093	246945674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246945828_246967694_246967793_246988124_246988256_246999347_246999441_246999911_247000075_247007905
transcript_15011.known	chr1	-	885	6	FSM	ENSG00000197472.15	ENST00000479214.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	46.7563899376331	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTTTCTTTTTT	-2	True	NA	88	True	AATAGA	-20	NA	247008056	246945546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_1503.known	chr1	+	929	3	FSM	ENSG00000120948.19	ENST00000611008.4	929	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	NA	False	NA	11	True	AATAAA	-20	NA	11022817	11025492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11023330_11024301_11024336_11025109
transcript_15037.nic	chr1	-	738	5	ISM	ENSG00000197472.15	ENST00000366504.6	862	6	-121	22112	-27	17662	5prime_fragment	FALSE	canonical	3	69	junction_1	30.4712979703852	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGGTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	247008120	246967660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999911_247000075_247007905
transcript_1504.known	chr1	+	379	2	FSM	ENSG00000120948.19	ENST00000613177.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGTAAGTTAACTTGTC	NA	False	NA	NA	False	ACTAAA	-22	NA	11023044	11025203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11023330_11025109
transcript_15040.nic	chr1	-	702	5	ISM	ENSG00000197472.15	ENST00000479214.5	885	6	-64	22114	-27	17662	5prime_fragment	FALSE	canonical	3	69	junction_1	35.7657308047802	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGGTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	247008120	246967660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_15044.known	chr1	-	504	4	FSM	ENSG00000197472.15	ENST00000498046.2	504	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.9865869364129	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATCTATTTCTGATGA	-2	True	NA	-43	True	ATTAAA	-12	NA	247008026	246945677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_247007905
transcript_1505.known	chr1	+	870	1	FSM	ENSG00000120948.19	ENST00000607145.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTAGTAGTCA	0	True	NA	7	True	ATTAAA	-15	NA	11029658	11030528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11029700_11030500
transcript_15054.known	chr1	-	3341	4	FSM	ENSG00000197472.15	ENST00000339986.8	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	19.4307888557196	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATTTCTGAATCT	-3	True	NA	NA	False	AATAAA	-24	NA	247008057	246985322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246988256_246999347_246999441_246999911_247000075_247007905
transcript_1506.known	chr1	+	4185	6	FSM	ENSG00000120948.19	ENST00000240185.8	4185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1258	junction_4	85.7983682828526	3320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	-5	True	NA	11	True	AATAAA	-20	NA	11012653	11025492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_15068.known	chr1	-	4197	4	FSM	ENSG00000277462.2	ENST00000366503.3	4197	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	24.589970855344	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGCCTTGAGTGTTTT	0	True	NA	-2	True	NA	NA	NA	247078811	247034636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247038428_247038809_247038871_247039410_247039538_247078593
transcript_1507.known	chr1	+	584	4	FSM	ENSG00000120948.19	ENST00000613864.4	584	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	686.717312048172	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGGAATACAGGTGTGAG	-5	True	NA	NA	False	NA	NA	NA	11012653	11018453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018373
transcript_15070.nic	chr1	-	2428	3	NIC	ENSG00000277462.2	novel	4197	4	NA	NA	-2	-2153	intron_retention	FALSE	canonical	3	171	junction_1	20	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATGTATGTGAAGTTT	-2	True	NA	-24	True	AATAAA	-14	NA	247078813	247036789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_247038871_247039410_247039538_247078593
transcript_15077.nnic	chr1	-	1601	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-45	1931	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9484512566783	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGAGTTCTTTGCATT	7979	False	NA	-18	True	CATAAA	-19	NA	247104417	247098030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247098292_247100388_247101320_247101730_247101792_247101986_247102114_247104196
transcript_15078.nnic	chr1	-	1751	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-45	1928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9484512566783	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCGTGAGTTCTTTGC	7979	False	NA	-21	True	CATAAA	-16	NA	247104417	247098033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247098316_247100259_247101320_247101730_247101792_247101986_247102114_247104196
transcript_1508.known	chr1	+	1835	6	FSM	ENSG00000120948.19	ENST00000315091.7	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	540.539508269285	4123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	1032	False	NA	16	True	AATAAA	-16	NA	11013715	11024183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022242_11023192
transcript_15080.nnic	chr1	-	1684	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-45	1861	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9484512566783	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTATTTTTTGCTAAT	7979	False	NA	-8	True	ATTAAA	-24	NA	247104417	247098100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247098316_247100259_247101320_247101730_247101792_247101986_247102114_247104196
transcript_15085.known	chr1	-	1951	4	FSM	ENSG00000188295.15	ENST00000343381.10	1951	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	18.1536650722535	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAATAA	8024	False	NA	-38	True	NA	NA	NA	247104372	247099990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247103938
transcript_15086.known	chr1	-	730	4	FSM	ENSG00000188295.15	ENST00000366501.1	730	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.3781471969828	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACGAATGTAAGGAATGT	8118	False	NA	NA	False	AATACA	-27	NA	247104278	247100855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247101320_247101730_247101792_247101990_247102114_247104196
transcript_1509.known	chr1	+	434	2	FSM	ENSG00000120948.19	ENST00000617757.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCTTCAAATAAACTTA	NA	False	NA	-15	True	CATAAA	-20	NA	11023322	11024152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11023668_11024063
transcript_15097.nnic	chr1	-	676	5	NNC	ENSG00000196418.13	novel	2776	4	NA	NA	-45	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	64.0429543353521	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGCTGTTCATTATT	NA	False	NA	-27	True	AATAAA	-23	NA	247172065	247154984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247155125_247155565_247155696_247159005_247159067_247159686_247159814_247171847
transcript_15099.known	chr1	-	2243	4	FSM	ENSG00000196418.13	ENST00000472531.5	2243	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	60.8166643829359	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGCTATCCTTATATTT	9	False	NA	NA	False	AATAAA	-16	NA	247172005	247121974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247123872_247159005_247159067_247159686_247159814_247171847
transcript_151.known	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	19.5	8156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_+_10792_10897_11188_11403
transcript_1510.known	chr1	+	701	5	FSM	ENSG00000120948.19	ENST00000473118.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	607.934618195082	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGGATGAGCTGCGG	NA	False	NA	NA	False	NA	NA	NA	11012343	11020489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012429_11013715_11013966_11016843_11017008_11018732_11018874_11020428
transcript_15100.known	chr1	-	956	4	FSM	ENSG00000196418.13	ENST00000491356.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	58.9764548122573	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATGATTT	12	False	NA	-12	True	AATAAA	-17	NA	247172002	247138144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247138758_247159005_247159067_247159686_247159814_247171847
transcript_15101.nnic	chr1	-	1117	4	NNC	ENSG00000196418.13	novel	2776	4	NA	NA	-45	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	62.1986066296237	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGCTGTTCATTATT	NA	False	NA	-27	True	AATAAA	-23	NA	247172065	247154984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247155696_247159005_247159067_247159686_247159814_247171847
transcript_15103.known	chr1	-	1674	4	FSM	ENSG00000196418.13	ENST00000340684.10	1674	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	38.1342657228669	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTGAGGTG	-2	True	NA	NA	False	AATATA	-18	NA	247172016	247155900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247157218_247159005_247159067_247159686_247159814_247171847
transcript_15104.known	chr1	-	701	4	FSM	ENSG00000196418.13	ENST00000491848.1	701	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	44.9691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGGAATGTGGCAAAGC	9	False	NA	NA	False	NA	NA	NA	247172005	247156916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247157218_247159005_247159067_247159686_247159868_247171847
transcript_15105.known	chr1	-	2776	4	FSM	ENSG00000196418.13	ENST00000543802.3	2776	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	46.6499970227461	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTCCTGCTGTTCAT	-6	True	NA	-31	True	AATAAA	-19	NA	247172020	247154988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247157404_247159005_247159067_247159686_247159814_247171847
transcript_1511.known	chr1	-	1260	8	FSM	ENSG00000116649.10	ENST00000376957.7	1260	8	0	0	0	0	multi-exon	FALSE	canonical	3	2518	junction_2	68.1741467545747	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	21	True	NA	-6	True	NA	NA	NA	11060018	11054588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
transcript_15111.nnic	chr1	-	744	4	NNC	ENSG00000196418.13	novel	2243	4	NA	NA	-45	-678	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	59.4362403476756	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAATGATGGGGTTGTC	NA	False	NA	NA	False	AATAAA	-18	NA	247172065	247157594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247157933_247159005_247159067_247159686_247159814_247171847
transcript_15115.known	chr1	-	1246	1	FSM	ENSG00000259865.1	ENST00000566446.1	1246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTGTGGTGAAAA	1249	False	NA	-4	True	ATTAAA	-24	NA	247188526	247187280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247187300_247188500
transcript_15119.nnic	chr1	-	1038	5	NNC	ENSG00000227671.4	novel	430	4	NA	NA	-28	1240	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4.96865172858795	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATTTGATACA	NA	False	NA	-6	True	AATAAA	-21	NA	247210884	247198158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247198700_247199359_247199456_247200066_247200194_247202015_247202096_247210690
transcript_1512.nic	chr1	-	1379	7	ISM	ENSG00000116649.10	ENST00000376957.7	1260	8	312	0	-20	0	3prime_fragment	FALSE	canonical	3	2518	junction_2	34.9368477875914	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	333	False	NA	-6	True	NA	NA	NA	11059706	11054588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224
transcript_15125.known	chr1	-	430	4	FSM	ENSG00000227671.4	ENST00000606173.1	430	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGTGAAGAAACATGAG	-20	True	NA	NA	False	NA	NA	NA	247210856	247199398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247199456_247200066_247200194_247202015_247202096_247210690
transcript_15128.nnic	chr1	-	1614	3	NIC	ENSG00000227671.4	novel	430	4	NA	NA	-24	1240	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTGATGATTTGATACA	NA	False	NA	-6	True	AATAAA	-21	NA	247210880	247198158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_247199456_247200066_247200194_247210690
transcript_15129.known	chr1	-	660	2	FSM	ENSG00000227671.4	ENST00000606454.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCATTCATTGCCT	14	True	NA	NA	False	AAGAAA	-14	NA	247210822	247201567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247202096_247210690
transcript_15130.nnic	chr1	-	2459	2	Fusion	ENSG00000227671.4_ENSG00000232347.1	novel	706	4	NA	NA	-24	3261	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACAGTGCTTTGCTGAGTT	NA	False	NA	-18	True	AATAAA	-14	NA	247210880	247207429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_247209699_247210690
transcript_15131.nnic	chr1	-	1493	2	Fusion	ENSG00000227671.4_ENSG00000232347.1	novel	706	4	NA	NA	-24	2295	multi-exon	FALSE	canonical	3	5	junction_1	0	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGGATTCTTCAAAC	NA	False	NA	NA	False	AATAAA	-17	NA	247210880	247208395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_247209699_247210690
transcript_15134.known	chr1	-	1367	3	FSM	ENSG00000196772.5	ENST00000641093.1	1367	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATTAATTACATTTTTC	NA	False	NA	NA	False	AAAAAG	-39	NA	247824119	247814659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247815745_247819062_247819178_247823952
transcript_15135.nic	chr1	-	1411	4	ISM	ENSG00000175137.11	ENST00000366472.6	3148	7	-20	5584	-20	0	5prime_fragment	FALSE	canonical	3	69	junction_3	8.04155872120988	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTACCATGCACGTTTCAT	-2	True	NA	NA	False	AATAAA	-29	NA	248825935	248816029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_248816663_248816821_248816885_248824752_248825367_248825834
transcript_15136.nnic	chr1	+	493	4	NNC	ENSG00000171161.13	novel	3045	4	NA	NA	89	-801	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	83.0033466527438	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAATGCCACCAACTTTT	0	True	NA	-22	True	NA	NA	NA	248838419	248846300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_248838552_248844482_248844637_248845565_248845663_248846190
transcript_15137.known	chr1	+	3045	4	FSM	ENSG00000171161.13	ENST00000306562.8	3045	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	19.94993734326	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGTGCCGCCTTTATC	-11	True	NA	25	True	AATAAA	-18	NA	248838223	248849517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_248838552_248844482_248844637_248845565_248845663_248847051
transcript_15138.known	chr1	-	2065	12	FSM	ENSG00000171163.16	ENST00000451251.5	2065	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	52.7517184710877	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGAGCTGGACTACTTT	260	False	NA	-64	True	NA	NA	NA	248858860	248850065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858511
transcript_15139.known	chr1	-	1942	12	FSM	ENSG00000171163.16	ENST00000306601.9	1942	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	42.7879646320711	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-1	True	NA	-6	True	AATAAA	-15	NA	248859085	248850007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858917
transcript_15147.known	chr1	-	1710	11	FSM	ENSG00000171163.16	ENST00000366471.7	1710	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	54.3061690786599	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-1	True	NA	-6	True	AATAAA	-15	NA	248859085	248850007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248859014
transcript_15151.known	chr1	+	2717	3	FSM	ENSG00000185220.12	ENST00000329291.6	2717	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	13	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCTGTTGTGCTAGCA	-21	True	NA	8	True	ATTAAA	-16	NA	248906234	248919146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_248906343_248913815_248913880_248916601
transcript_15155.known	chr1	+	2879	3	FSM	ENSG00000185220.12	ENST00000355360.8	2879	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	36	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTGCATCCTCTGTCT	NA	False	NA	NA	False	NA	NA	NA	248906195	248919946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_248906343_248913815_248913880_248917278
transcript_1516.known	chr1	-	2796	25	FSM	ENSG00000171824.14	ENST00000376936.9	2796	25	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_8	48.5188250979853	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-15	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_15161.nnic	chr10	-	1690	4	NIC	ENSG00000261456.6	novel	1562	4	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	2.49443825784929	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	74211	46887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_48115_48614_48726_48803_48913_73968
transcript_15162.nnic	chr10	-	1656	4	NNC	ENSG00000261456.6	novel	1562	4	NA	NA	-2486	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	2.49443825784929	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGCCTCCATCTTCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	76649	46887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_48115_48614_48726_48803_48913_76440
transcript_15163.known	chr10	+	2150	15	FSM	ENSG00000015171.20	ENST00000397962.8	2150	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	50.9855922025517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGCCCTTCCCGGAGTC	37	False	NA	NA	False	NA	NA	NA	134464	252470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_134787_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_15164.known	chr10	+	4100	15	FSM	ENSG00000015171.20	ENST00000381604.9	4100	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	32.3356914071048	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTAATTTGTTTATT	1	True	NA	25	True	AATAAA	-19	NA	135454	254637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_15167.known	chr10	+	3898	14	FSM	ENSG00000015171.20	ENST00000381607.8	3898	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	43.2961454752932	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTAGCTTTAGTA	-9	True	NA	14	True	AATAAA	-8	NA	135483	254626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_135560_179993_180129_209888_210049_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_15172.nic	chr10	+	1559	3	ISM	ENSG00000015171.20	ENST00000403354.5	1664	13	-23	41257	6	-26438	5prime_fragment	FALSE	canonical	3	111	junction_1	50.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTATAGATATCTTTT	7	True	NA	NA	False	AAAAAG	-12	NA	135460	211213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_135560_179993_180129_209888
transcript_15175.known	chr10	+	4656	17	FSM	ENSG00000107937.19	ENST00000360803.9	4656	17	0	0	0	0	multi-exon	FALSE	canonical	2	410	junction_14	89.7620987666844	1388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTTTCTTTGGTAAT	-15	True	NA	NA	False	AATAAA	-23	NA	988433	1019932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419_1010521_1012464_1012663_1014246_1014313_1015752_1015897_1017074
transcript_15199.known	chr10	-	3370	5	FSM	ENSG00000067064.12	ENST00000429642.2	3370	5	0	0	0	0	multi-exon	TRUE	canonical	1	17	junction_4	373.515980247164	835	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCTCCCTGGGGACA	31	True	NA	NA	False	NA	NA	NA	1048883	1039151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1043998_1044172_1048263
transcript_152.known	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3769	junction_2	292.5	7851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_+_10792_10882_11058_11434
transcript_15202.known	chr10	+	5137	14	FSM	ENSG00000047056.17	ENST00000263150.9	5137	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	14.2376282846406	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTTCATCCCTCATCA	-17	True	NA	NA	False	ATTAAA	-14	NA	1056384	1132372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_1056969_1072115_1072294_1077906_1078004_1080010_1080107_1080411_1080477_1084402_1084539_1086285_1086358_1093451_1093497_1096169_1096247_1103601_1103837_1105125_1105268_1124217_1124353_1124909_1125025_1129212
transcript_15208.nnic	chr10	-	428	3	Antisense	novelGene_ENSG00000047056.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	10.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAGGCAATTAATAGCC	248	False	NA	NA	False	NA	NA	NA	1056457	1053735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_-_1053937_1054167_1054246_1056308
transcript_1521.known	chr1	-	2721	24	FSM	ENSG00000171824.14	ENST00000304457.11	2721	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	146.704814022809	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-15	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_15211.nnic	chr10	+	878	2	NNC	ENSG00000047056.17	novel	4582	14	NA	NA	-473	-45648	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCAGTTCTGGGTCAT	-15	True	NA	NA	False	AATAAA	-19	NA	1049064	1050598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_1049642_1050297
transcript_15217.known	chr10	-	1464	2	FSM	ENSG00000287560.1	ENST00000658425.1	1464	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTGCACGTATGTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	3047083	3042534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3043735_3046819
transcript_15219.known	chr10	-	3386	27	FSM	ENSG00000107959.17	ENST00000677922.1	3386	27	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	32.0126870190166	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCAACTCTGACTTAACC	NA	False	NA	-22	True	NA	NA	NA	3172806	3137745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140766_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_15221.known	chr10	-	3427	27	FSM	ENSG00000107959.17	ENST00000224949.9	3427	27	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	15.7659002111347	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	0	True	NA	-4	True	AATAAA	-18	NA	3172782	3137727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_15223.known	chr10	-	3242	25	FSM	ENSG00000107959.17	ENST00000678436.1	3242	25	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	30.6661005382527	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACTTAACCTCTGCT	NA	False	NA	-16	True	AATAAA	-6	NA	3172807	3137739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_15227.known	chr10	+	2626	22	FSM	ENSG00000067057.18	ENST00000381125.9	2626	22	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	86.885751345362	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCTGTTTTAGTTTT	17	True	NA	34	True	ATTAAA	-20	NA	3067547	3136802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_3067708_3082387_3082462_3099274_3099353_3101364_3101555_3103778_3103945_3105114_3105160_3105392_3105502_3107213_3107310_3108700_3108794_3109354_3109481_3112221_3112287_3113118_3113189_3113371_3113519_3116775_3116847_3118781_3118870_3119891_3120045_3129818_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
transcript_15233.known	chr10	-	1814	15	FSM	ENSG00000107959.17	ENST00000678972.1	1814	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	41.9618996282123	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTAAATGTCACTCCTC	NA	False	NA	NA	False	NA	NA	NA	3172807	3151201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165524_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_15241.nic	chr10	+	1882	3	ISM	ENSG00000067057.18	ENST00000381125.9	2626	22	-46	35926	-46	-678	5prime_fragment	FALSE	canonical	3	369	junction_1	3.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCCCCCTGGCCCCA	2	False	NA	NA	False	TTTAAA	-37	NA	3067501	3100876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_3067708_3082387_3082462_3099274
transcript_15242.known	chr10	+	143	2	FSM	ENSG00000067057.18	ENST00000495715.1	143	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCGGGTACGAATGGA	98	False	NA	NA	False	NA	NA	NA	3067671	3069380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_3067708_3069273
transcript_15243.known	chr10	-	3487	27	FSM	ENSG00000107959.17	ENST00000380989.6	3487	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	32.6896831525695	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCTGCTTGAGTCATTA	NA	False	NA	-6	True	AATAAA	-16	NA	3172841	3137729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148167_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_15247.known	chr10	-	4590	4	FSM	ENSG00000067082.15	ENST00000497571.6	4590	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	5.73488351136175	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTACATCTCTTTTT	-3	True	NA	NA	False	AATAAA	-18	NA	3785209	3775995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3779591_3780105_3780230_3781640_3782215_3784912
transcript_15250.known	chr10	-	4537	3	FSM	ENSG00000067082.15	ENST00000542957.1	4537	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGTTACATCTCTTTT	1247	False	NA	NA	False	AATAAA	-17	NA	3785281	3775996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3779591_3781640_3782215_3784912
transcript_15252.known	chr10	+	1613	10	FSM	ENSG00000165568.18	ENST00000298375.12	1613	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	3.92837100659193	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTTTAATTTCTTTT	-10	True	NA	NA	False	AATAAA	-24	NA	4826206	4848062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4839728_4839827_4841784_4841858_4842420_4842505_4847147_4847231_4847487
transcript_15254.known	chr10	+	6543	9	FSM	ENSG00000187134.14	ENST00000380872.9	6543	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	2.3418742493994	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATGTTAAGAGGGTT	-3	True	NA	NA	False	AATAAA	-16	NA	4963414	4983283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_4963529_4965913_4966082_4966926_4967044_4968308_4968387_4968821_4968945_4972200_4972311_4972583_4972750_4975850_4975934_4977699
transcript_15262.known	chr10	+	1186	9	FSM	ENSG00000196139.14	ENST00000380554.5	1186	9	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_6	9.75881012214092	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	-6	True	NA	14	True	AATAAA	-21	NA	5094413	5107686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_5094529_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_15266.known	chr10	-	435	1	FSM	ENSG00000223987.1	ENST00000451325.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTAATCTTGTATACAA	NA	False	NA	NA	False	AATACA	-30	NA	5304865	5304430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5304400_5304900
transcript_15269.known	chr10	+	3253	10	FSM	ENSG00000173848.19	ENST00000380359.3	3253	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	88.6609577666448	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGAAGGTTTCTTGC	-1	True	NA	17	True	ATTAAA	-23	NA	5446610	5458463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_5446859_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_15272.known	chr10	+	3989	12	FSM	ENSG00000173848.19	ENST00000355029.9	3989	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	67.9629213445534	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGTGTTTGAGAGCAT	-3	True	NA	NA	False	ATTAAA	-20	NA	5412556	5459056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_5412821_5426654_5426722_5429169_5429230_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_15274.known	chr10	-	2717	6	FSM	ENSG00000196372.13	ENST00000357700.11	2717	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	6.4	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGTTCACACGACTC	10	True	NA	-11	True	AATAAA	-20	NA	5666595	5638866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5640831_5641769_5641962_5648969_5649105_5651212_5651364_5652862_5653051_5666508
transcript_15275.nnic	chr10	-	721	2	NNC	ENSG00000196372.13	novel	2717	6	NA	NA	-4	-15689	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCATTCCCTATGGACG	-13	True	NA	-13	True	AATAAA	-30	NA	5666582	5664660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_5665308_5666508
transcript_15287.known	chr10	-	2297	11	FSM	ENSG00000057608.17	ENST00000380191.9	2297	11	0	0	0	0	multi-exon	FALSE	canonical	3	1920	junction_7	100.322679390056	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGTGTTGGTTTGTG	-4	True	NA	-5	True	AATAAA	-19	NA	5813434	5765222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5794884_5795020_5796762_5796863_5800597_5800706_5813213
transcript_15293.known	chr10	-	1408	10	FSM	ENSG00000057608.17	ENST00000380181.7	1408	10	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	602.13306023023	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATATAATGAAATCAATA	19	False	NA	60	True	TTTAAA	-14	NA	5813411	5765953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5796762_5796863_5800597_5800706_5813213
transcript_153.known	SIRV10002	+	10001	1	FSM	SIRV10002A	SIRV10002	10001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	10001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV10002_+_0_10000
transcript_15307.known	chr10	-	1646	7	FSM	ENSG00000134461.16	ENST00000380092.8	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	13.4742552876052	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTCTTAAGTCAGTC	11	True	NA	1	True	AATAAA	-18	NA	5889871	5878086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5878288_5880297_5880377_5883005_5883168_5883968_5884078_5885722_5885766_5887846_5888068_5889040
transcript_15310.known	chr10	-	1022	5	FSM	ENSG00000134470.21	ENST00000379974.1	1022	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.03108891324554	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACCTGCCTGCCTGTCG	NA	False	NA	NA	False	NA	NA	NA	5978179	5952897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5977776
transcript_15311.known	chr10	+	927	5	FSM	ENSG00000134453.16	ENST00000476706.5	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	361.332603012792	3229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTGTTTCTCTTTT	NA	False	NA	40	True	TATAAA	-33	NA	6112701	6115766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6113069_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_15312.known	chr10	+	4157	15	FSM	ENSG00000170525.21	ENST00000379789.8	4157	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	15.403418650496	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACGAAGTAAACCTCTGG	12	True	NA	74	True	AATAAA	-19	NA	6144933	6235532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6145014_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134_6217192_6219568_6219694_6220657_6220866_6221380_6221528_6221640_6221746_6222854_6222985_6223957_6224021_6224148_6224214_6226191_6226366_6232894
transcript_15313.known	chr10	-	438	2	FSM	ENSG00000213994.3	ENST00000427630.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGAGCTTTTTGTGTAT	4915	False	NA	NA	False	AATAAA	-14	NA	6202693	6197611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_6197796_6202439
transcript_15315.known	chr10	-	3255	18	FSM	ENSG00000065675.16	ENST00000263125.10	3255	18	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_14	20.1320897589466	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCTTAATCGTTTAC	-9	True	NA	-10	True	AATAAA	-11	NA	6580276	6427147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_15317.known	chr10	-	3224	17	FSM	ENSG00000065675.16	ENST00000539722.5	3224	17	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_14	22.127118542639	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTAATCGTTTACTTCCC	47	False	NA	-5	True	AATAAA	-16	NA	6580301	6427142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6510994_6511195_6515017_6515145_6580210
transcript_1532.known	chr1	+	487	2	FSM	ENSG00000230337.2	ENST00000447600.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCCACCCATTAAGTC	137	False	NA	-42	True	AATACA	-2	NA	11099674	11102051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11099911_11101800
transcript_15322.nic	chr10	+	888	3	NIC	ENSG00000237943.8	novel	1263	3	NA	NA	39	-1	combination_of_known_junctions	FALSE	canonical	3	33	junction_2	50	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAGTGTCAATTT	13	False	NA	10	True	AATAAA	-15	NA	6580463	6584298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_6580928_6583675_6583919_6584117
transcript_15323.known	chr10	+	1263	3	FSM	ENSG00000237943.8	ENST00000613651.2	1263	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	8	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAAATAGCTCTAAAC	6	False	NA	NA	False	AAAAAG	-28	NA	6580561	6584508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6580928_6582137_6582202_6583675
transcript_15325.known	chr10	+	1254	2	FSM	ENSG00000237943.8	ENST00000667809.1	1254	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCTCCTCTTGGGGAG	0	True	NA	NA	False	NA	NA	NA	6580555	6584557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6580928_6583675
transcript_15327.known	chr10	+	421	2	FSM	ENSG00000237943.8	ENST00000449648.2	483	2	57	5	3	-1	multi-exon	FALSE	canonical	3	33	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAGTGTCAATTT	21	False	NA	10	True	AATAAA	-15	NA	6583678	6584298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6583919_6584117
transcript_15331.nnic	chr10	+	908	4	NNC	ENSG00000285988.1	novel	614	4	NA	NA	62517	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	7.07106781186548	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCACCGTGATTTATT	NA	False	NA	6	True	AATACA	-20	NA	6799934	6840712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_6800440_6833642_6833689_6837973_6838009_6840390
transcript_15335.known	chr10	+	2529	2	FSM	ENSG00000223784.2	ENST00000650334.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTTTACTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	6737275	6740532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6737629_6738356
transcript_15338.nnic	chr10	+	2776	4	NNC	ENSG00000285988.1	novel	614	4	NA	NA	62839	2190	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	7.07106781186548	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTTTTTGTGTTTCTTT	NA	False	NA	19	True	AATAAA	-19	NA	6800256	6842902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_6800440_6833642_6833689_6837973_6838009_6840390
transcript_15340.known	chr10	-	798	4	FSM	ENSG00000198879.13	ENST00000682043.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.2659863237109	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGTGCATTTTCAGATG	14	True	NA	NA	False	NA	NA	NA	7411006	7367483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_7367890_7370280_7370376_7381798_7381950_7410860
transcript_15341.known	chr10	-	566	4	FSM	ENSG00000198879.13	ENST00000682180.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	2.86744175568088	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGCGGATTTGCACCCCG	2	True	NA	NA	False	NA	NA	NA	7411488	7367713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_7367890_7370280_7370376_7381798_7381950_7411344
transcript_15342.known	chr10	-	6716	14	FSM	ENSG00000123243.15	ENST00000397146.7	6716	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	4.88567523329244	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTTTGTAGGCATTT	-1	True	NA	NA	False	AATAAA	-21	NA	7666966	7559269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_7563385_7566029_7566408_7569667_7569785_7573141_7573196_7576452_7577013_7579754_7580065_7585900_7586070_7615981_7616099_7617112_7617283_7637227_7637479_7640753_7640856_7641926_7642091_7655630_7655676_7666802
transcript_15344.known	chr10	-	3132	12	FSM	ENSG00000123243.15	ENST00000397145.6	3132	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5400846495599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAAGTGTATGGAAG	NA	False	NA	NA	False	AATAAA	-17	NA	7666998	7571404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_7572399_7573141_7573196_7576452_7577013_7579754_7580065_7585900_7586070_7615981_7616099_7617112_7617283_7637227_7637479_7640753_7640856_7641926_7642091_7655630_7655676_7666802
transcript_1535.known	chr1	+	3654	2	FSM	ENSG00000120942.14	ENST00000376810.6	3654	2	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	0	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGGTCTGGCTTCTGGT	-13	True	NA	12	True	ATTAAA	-23	NA	11273197	11288434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11274061_11285643
transcript_15350.known	chr10	-	6360	13	FSM	ENSG00000151657.12	ENST00000379562.9	6360	13	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_12	18.4185519397035	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATTACTCAGAAATGG	-20	True	NA	2	True	AATAAA	-21	NA	7787993	7750961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_15354.nnic	chr10	-	1431	12	NIC	ENSG00000151657.12	novel	6360	13	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_11	54.6378006164079	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAAAGTGTTTTATCTA	NA	False	NA	-24	True	ATTAAA	-8	NA	7788011	7755813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7787819
transcript_15357.nic	chr10	-	863	8	ISM	ENSG00000151657.12	ENST00000379562.9	6360	13	-32	18281	-32	-8010	5prime_fragment	FALSE	canonical	3	164	junction_7	20.071301473924	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGCACTGGATGAAAT	NA	False	NA	-27	True	AAAAAG	-1	NA	7788025	7769242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_15361.known	chr10	-	885	5	FSM	ENSG00000151657.12	ENST00000471320.5	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_4	7.77817459305202	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTTCATTAAAGAATGT	NA	False	NA	-45	True	NA	NA	NA	7766359	7755834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052
transcript_15365.known	chr10	+	1096	9	FSM	ENSG00000165629.20	ENST00000493053.5	1096	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1063.86168626377	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	42	False	NA	NA	False	AATAAA	-16	NA	7788146	7807801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_15377.known	chr10	+	1101	10	FSM	ENSG00000165629.20	ENST00000356708.12	1101	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	806.838549180965	14301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	1	True	NA	NA	False	AATAAA	-16	NA	7788176	7807801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_15378.known	chr10	+	1078	9	FSM	ENSG00000165629.20	ENST00000335698.4	1078	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1108.00450557523	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATAAGAACAATAGATA	1	True	NA	NA	False	AATAAA	-30	NA	7788176	7807815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7807658
transcript_15379.known	chr10	+	292	4	FSM	ENSG00000165629.20	ENST00000465936.5	292	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1140.0679316992	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAATCATTGTTTTTC	3	True	NA	NA	False	AATAAA	-8	NA	7788178	7807793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7796120_7796156_7806973_7807011_7807658
transcript_15380.known	chr10	+	622	6	FSM	ENSG00000165629.20	ENST00000460820.6	622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1055.31201073427	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCATCTTTTCCCTT	8	True	NA	NA	False	NA	NA	NA	7788183	7800052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026
transcript_15381.nic	chr10	+	1160	3	ISM	ENSG00000165632.9	ENST00000687671.1	4543	4	-17	14898	-17	-14898	5prime_fragment	FALSE	canonical	3	28	junction_1	2	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGGACGTTCCAAGAG	NA	False	NA	NA	False	AAGAAA	-6	NA	7818479	7964440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_7818876_7824317_7824561_7963919
transcript_15382.nic	chr10	+	1843	3	ISM	ENSG00000165632.9	ENST00000687671.1	4543	4	-17	14215	-17	-14215	5prime_fragment	FALSE	canonical	3	28	junction_1	2	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGAGATAGGGAGAGGG	NA	False	NA	NA	False	AAAAAG	-33	NA	7818479	7965123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_7818876_7824317_7824561_7963919
transcript_15383.nic	chr10	+	1910	3	ISM	ENSG00000165632.9	ENST00000687671.1	4543	4	-17	14148	-17	-14148	5prime_fragment	FALSE	canonical	3	28	junction_1	2	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAAGAGAAAGACAAGGA	NA	False	NA	NA	False	GATAAA	-7	NA	7818479	7965190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_7818876_7824317_7824561_7963919
transcript_15384.nic	chr10	+	2093	3	ISM	ENSG00000165632.9	ENST00000687671.1	4543	4	-17	13965	-17	-13965	5prime_fragment	FALSE	canonical	3	28	junction_1	2	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAGAGAGAAAGGCAAGAA	NA	False	NA	NA	False	CATAAA	-13	NA	7818479	7965373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_7818876_7824317_7824561_7963919
transcript_15385.nic	chr10	+	2347	3	ISM	ENSG00000165632.9	ENST00000687671.1	4543	4	-17	13711	-17	-13711	5prime_fragment	FALSE	canonical	3	28	junction_1	2	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGAAGAAAAAGAAGG	NA	False	NA	-29	True	AAAAAG	-9	NA	7818479	7965627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_7818876_7824317_7824561_7963919
transcript_15389.known	chr10	+	4875	7	FSM	ENSG00000165632.9	ENST00000344293.6	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.67646212197547	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	-11	True	NA	10	True	AATAAA	-20	NA	7818504	8016631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7818876_7824317_7824561_7963919_7965743_7977240_7977324_8009077_8009331_8013730_8013838_8014636
transcript_15390.known	chr10	+	2650	6	FSM	ENSG00000107485.18	ENST00000346208.4	2650	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	43.0655314607866	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTGGTTGTGCTCGGA	-7	True	NA	21	True	AATAAA	-21	NA	8054809	8074890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_8054892_8055286_8055897_8058304_8058842_8063995_8064139_8069472_8069599_8073738
transcript_15393.known	chr10	-	565	2	FSM	ENSG00000197308.9	ENST00000417359.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGGTCTGGGTGGTTTG	3839	False	NA	1	True	AATAAA	-16	NA	8053256	8052241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_8052736_8053185
transcript_15394.known	chr10	-	2214	2	FSM	ENSG00000197308.9	ENST00000355358.1	2214	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTCGCTGTGAGTCTGG	-7	True	NA	-1	True	AATAAA	-17	NA	8053484	8050449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_8051579_8052399
transcript_15395.known	chr10	+	3083	6	FSM	ENSG00000107485.18	ENST00000379328.9	3083	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	19.0326036053925	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGACATCGTATCCAC	5	True	NA	21	True	AATAAA	-21	NA	8054687	8075198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_8054892_8055286_8055897_8058304_8058842_8063992_8064139_8069472_8069599_8073738
transcript_15397.known	chr10	-	710	4	FSM	ENSG00000225383.8	ENST00000446372.3	710	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGACCTGATTC	-10	True	NA	1	True	AATAAA	-21	NA	10794929	10784436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_10784670_10786644_10786736_10792371_10792526_10794697
transcript_15398.known	chr10	-	781	4	FSM	ENSG00000225383.8	ENST00000667544.1	781	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGACCTGATTC	-10	True	NA	1	True	AATAAA	-21	NA	10794980	10784436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_10784670_10786644_10786756_10792371_10792526_10794697
transcript_15399.known	chr10	-	412	3	FSM	ENSG00000225383.8	ENST00000634899.2	412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGACCTGATTC	5973	False	NA	1	True	AATAAA	-21	NA	10789081	10784436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_10784670_10786644_10786736_10788993
transcript_154.known	SIRV10003	+	9970	1	FSM	SIRV10003A	SIRV10003	9970	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	9970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV10003_+_0_10000
transcript_15400.known	chr10	+	7982	14	FSM	ENSG00000048740.19	ENST00000542579.5	7982	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	35.2344640319858	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAAGTTCTCCGGAGT	13	True	NA	NA	False	AATAAA	-11	NA	11017929	11336667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
transcript_15402.known	chr10	+	1952	14	FSM	ENSG00000048740.19	ENST00000632065.1	1952	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	50.4149644357036	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCCACTGTATTCTCC	49	True	NA	29	True	ATTAAA	-41	NA	11017965	11329279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11320856_11320899_11321206_11321387_11325835_11325980_11328925
transcript_15403.nic	chr10	+	5548	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	81	-2	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	19.6718643885299	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTGTTTCTCTCTCTGCG	-38	True	NA	16	True	ATTAAA	-13	NA	11018046	11334356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_15404.nic	chr10	+	2469	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	81	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_10	19.6718643885299	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATACAAAAAAAAAAAAAAG	-38	True	NA	16	True	NA	NA	NA	11018046	11331277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_15406.known	chr10	+	8044	14	FSM	ENSG00000048740.19	ENST00000417956.6	8044	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	46.9475346095741	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCCGGAGTGCATTTTA	56	False	NA	NA	False	AATAAA	-19	NA	11165029	11336675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
transcript_15408.known	chr10	+	1892	14	FSM	ENSG00000048740.19	ENST00000608830.5	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	37.7641387762887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAAGTCAATGTGAAA	11	False	NA	NA	False	NA	NA	NA	11165139	11330639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_15427.nnic	chr10	+	720	3	NNC	ENSG00000048740.19	novel	7085	13	NA	NA	-46	-103820	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATGAAAGTAATTTTTAAAA	-10	True	NA	NA	False	AATAAA	-37	NA	11165093	11210969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_11165318_11165485_11165683_11210670
transcript_15433.known	chr10	+	1633	5	FSM	ENSG00000134463.15	ENST00000379215.9	1633	5	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_4	31.9403741368194	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTATGTTTTATCTCCCC	-24	True	NA	13	True	AATAAA	-18	NA	11742381	11764070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11742747_11747348_11747471_11749494_11749593_11755407_11755609_11763223
transcript_15434.known	chr10	+	3375	4	FSM	ENSG00000148426.13	ENST00000277570.10	3375	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	14.0791413879619	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTGTTTTTGCATTG	-25	True	NA	6	True	AATAAA	-20	NA	11823355	11872277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11823471_11851996_11852216_11866530_11866784_11869489
transcript_15435.known	chr10	-	5369	22	FSM	ENSG00000151461.20	ENST00000397053.6	5369	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	49.629694497989	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTGGCGTGGTGTTGTT	63	False	NA	-6	True	AATAAA	-13	NA	12043170	11920022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042913
transcript_15440.known	chr10	-	640	2	FSM	ENSG00000151461.20	ENST00000460569.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAGTTGATTGTATT	63	False	NA	0	True	NA	NA	NA	12043170	12035058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12035442_12042913
transcript_15443.known	chr10	-	5168	22	FSM	ENSG00000151461.20	ENST00000357604.10	5168	22	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_17	18.3540390186825	2051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCGTGGTGTTGTTT	-8	True	NA	-5	True	AATAAA	-14	NA	12042809	11920021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042754
transcript_15444.known	chr10	+	5173	17	FSM	ENSG00000181192.12	ENST00000263035.9	5173	17	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_3	17.2898091371767	724	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACTCCTGGACTTCT	0	True	NA	21	True	AATAAA	-22	NA	12068953	12123221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_15460.known	chr10	+	2495	12	FSM	ENSG00000065665.21	ENST00000298428.14	2495	12	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	12.2332699047304	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTAAGATCATTTGT	-5	True	NA	5	True	AATAAA	-17	NA	12129676	12165407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12164267
transcript_15462.known	chr10	+	2030	12	FSM	ENSG00000065665.21	ENST00000304267.12	2030	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	44.3649403683167	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTGTCTGCTTCTTTC	19	True	NA	NA	False	AATAAA	-14	NA	12129700	12169956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12169257
transcript_15484.known	chr10	+	1321	13	FSM	ENSG00000151465.14	ENST00000281141.9	1321	13	0	0	0	0	multi-exon	FALSE	canonical	3	2502	junction_7	193.290135260155	29808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTTTTCTACCGAGTC	-20	True	NA	52	True	AATAAA	-18	NA	12196187	12250589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12246148_12246278_12249580_12249719_12250310
transcript_15485.known	chr10	-	1201	10	FSM	ENSG00000165609.13	ENST00000537776.5	1201	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	427.931141339813	4448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTGGTGGTATGGA	-31	True	NA	-14	True	AATAAA	-11	NA	12196144	12167576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170913_12172768_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_15486.known	chr10	-	919	11	FSM	ENSG00000165609.13	ENST00000378937.7	919	11	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_8	530.605550291363	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGTGGTGGTATGGAA	6	True	NA	-13	True	AATAAA	-12	NA	12195822	12167575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184493_12184533_12184888_12184957_12186228_12186333_12195769
transcript_15487.known	chr10	-	1126	10	FSM	ENSG00000165609.13	ENST00000378940.7	1126	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	426.886690953911	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGTGATTTCTTTGG	0	True	NA	-45	True	NA	NA	NA	12195869	12169721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12170157_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_15488.known	chr10	-	1258	8	FSM	ENSG00000165609.13	ENST00000378927.7	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	1295	junction_1	53.3276357500863	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCTGTGTGGCCCTT	6	True	NA	-27	True	AATAAA	-3	NA	12195822	12170231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_15489.known	chr10	+	564	8	FSM	ENSG00000151465.14	ENST00000442050.5	564	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	927.51275913992	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTCAAGAAACACATACAG	24	True	NA	NA	False	AAGAAA	-22	NA	12196231	12237224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12217360_12217468_12230947_12230997_12235047_12235124_12237143
transcript_1549.known	chr1	+	3320	7	FSM	ENSG00000132879.14	ENST00000376770.5	3320	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	71.5885232887693	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	443	False	NA	NA	False	ATTAAA	-22	NA	11654856	11663327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_15490.known	chr10	+	2462	11	FSM	ENSG00000065665.21	ENST00000379033.7	2462	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	46.3992456835238	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTTTTCTAAGATCATT	NA	False	NA	2	True	AATAAA	-14	NA	12129640	12165404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12129795_12133240_12133309_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12164267
transcript_15491.known	chr10	+	646	8	FSM	ENSG00000151465.14	ENST00000429258.6	646	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	997.370931755184	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATAGAATATGAGGT	10	True	NA	NA	False	NA	NA	NA	12195964	12230978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12196024_12196129_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947
transcript_15501.known	chr10	+	3488	16	FSM	ENSG00000123240.17	ENST00000378752.7	3488	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	45.8255629776899	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	38	True	NA	7	True	ATTAAA	-2	NA	13100172	13138291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_15505.known	chr10	+	3479	15	FSM	ENSG00000123240.17	ENST00000378747.8	3479	15	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	39.3132371122615	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	28	True	NA	24	True	ATTAAA	-19	NA	13100162	13138308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_15506.known	chr10	+	3321	14	FSM	ENSG00000123240.17	ENST00000378757.6	3321	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	22.5060149750944	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	34	True	NA	24	True	ATTAAA	-19	NA	13100168	13138308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_15516.known	chr10	+	3157	20	FSM	ENSG00000065328.17	ENST00000484800.6	3157	20	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	56.0913382541976	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCAGTTTTCTCATCTG	13	True	NA	-92	True	NA	NA	NA	13161578	13209736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172624_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
transcript_15518.nic	chr10	+	2449	17	ISM	ENSG00000065328.17	ENST00000378714.8	4549	20	-32	9635	-32	-397	5prime_fragment	TRUE	canonical	3	211	junction_4	34.4129336151395	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAAAGATGAGAAAC	NA	False	NA	NA	False	AAAAAG	-7	NA	13161525	13201475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172627_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420
transcript_15520.nic	chr10	+	635	3	ISM	ENSG00000065328.17	ENST00000484800.6	3157	20	-53	38343	-32	-1081	5prime_fragment	FALSE	canonical	3	229	junction_1	71.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAATTATATGAGTT	NA	False	NA	NA	False	GATAAA	-25	NA	13161525	13171393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_13161607_13164127_13164210_13170921
transcript_15523.nnic	chr10	-	688	3	NIC	ENSG00000165623.10	novel	763	4	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	12.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGTATTATCTTCTCA	1	True	NA	-5	True	AATAAA	-14	NA	13234355	13221766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_13222201_13229610_13229710_13234200
transcript_15524.known	chr10	-	870	5	FSM	ENSG00000165623.10	ENST00000378681.8	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.9749371855331	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTATTATCTTCTCAA	-1	True	NA	-4	True	AATAAA	-15	NA	13234374	13221765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13222201_13229610_13229710_13233537_13233634_13233734_13233801_13234200
transcript_15525.known	chr10	-	1541	9	FSM	ENSG00000107537.14	ENST00000263038.9	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_4	33.6414922380087	1143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-3	True	NA	-7	True	AATAAA	-20	NA	13300064	13277798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_15527.known	chr10	-	3265	9	FSM	ENSG00000086475.15	ENST00000327347.10	3265	9	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_8	306.489294266537	3396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	0	True	NA	-21	True	AATAAA	-29	NA	13348293	13317427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_1553.known	chr1	+	959	6	FSM	ENSG00000132879.14	ENST00000376768.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	81.5794091667744	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTCTTCTTTGTGG	-10	True	NA	NA	False	NA	NA	NA	11654880	11661391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658532_11658629_11658735_11658872_11661129
transcript_15539.known	chr10	-	2387	8	FSM	ENSG00000086475.15	ENST00000378614.8	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1178.32149730895	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	13	True	NA	-18	True	AATAAA	-17	NA	13348280	13318079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13319357_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_15540.known	chr10	-	2988	8	FSM	ENSG00000086475.15	ENST00000545675.5	2988	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_7	1170.8314157391	2063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGATAAACCTACTGTT	-5	True	NA	-32	True	AATAAA	-18	NA	13348298	13317438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13347999
transcript_1555.known	chr1	+	2928	6	FSM	ENSG00000132879.14	ENST00000251547.10	2928	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	57.2174798466343	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	-14	True	NA	NA	False	ATTAAA	-22	NA	11654876	11663327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_15572.nnic	chr10	-	569	5	NNC	ENSG00000151474.23	novel	172	2	NA	NA	-51	-13026	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	6.44204936336256	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTCTAAGAAATTTTGT	233	False	NA	NA	False	NA	NA	NA	13891780	13795954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_13796113_13796495_13796589_13810813_13810909_13858846_13858913_13891623
transcript_15575.known	chr10	-	495	4	FSM	ENSG00000151474.23	ENST00000477221.2	495	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	11.1455023315337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACGCTGAAGACCTCGAA	-8	True	NA	NA	False	NA	NA	NA	13707567	13693982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13694040_13701339_13701479_13707036_13707114_13707345
transcript_15578.known	chr10	-	1287	3	FSM	ENSG00000151474.23	ENST00000495956.2	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATAAAAACATAAAA	NA	False	NA	-33	True	NA	NA	NA	13657123	13646333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13647036_13654415_13654513_13656635
transcript_15579.known	chr10	-	2731	3	FSM	ENSG00000151474.23	ENST00000492155.5	2731	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	13707757	13692168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13694040_13701339_13701479_13707036
transcript_15595.known	chr10	+	1670	10	FSM	ENSG00000165630.14	ENST00000378572.8	1670	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	14.4666495988976	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGGTATAACTCAAATG	-8	True	NA	3	True	AATAGA	-19	NA	13586964	13630859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13613740_13613882_13614014_13614087_13616397_13616554_13630259
transcript_1560.known	chr1	+	822	6	FSM	ENSG00000132879.14	ENST00000376760.5	822	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.4165860480036	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAGGCCAGGTGTCC	19	True	NA	NA	False	NA	NA	NA	11654909	11661349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_15617.known	chr10	+	1155	2	FSM	ENSG00000239665.8	ENST00000430721.2	1155	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGTTTCTTCCTTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	13653824	13655929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13654428_13655377
transcript_15619.known	chr10	-	2633	4	FSM	ENSG00000065809.14	ENST00000468747.5	2633	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	13.0979218029257	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTTAAGAAAGCATTTC	1008	False	NA	NA	False	NA	NA	NA	14604389	14519158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14521307_14521868_14522020_14530331_14530516_14604239
transcript_1562.known	chr1	+	1896	5	FSM	ENSG00000132879.14	ENST00000251546.8	1896	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	94.1674041269058	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	1	True	NA	15	True	AATAAA	-16	NA	11654374	11662289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654582_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_15620.known	chr10	-	425	2	FSM	ENSG00000065809.14	ENST00000491458.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCCACTGGACGCTT	1127	False	NA	-14	True	AATAAA	-18	NA	14604270	14602456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14602851_14604239
transcript_15624.known	chr10	-	1390	4	FSM	ENSG00000185267.10	ENST00000465530.2	1390	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTTAATGCTATTTTA	-10	True	NA	NA	False	ATTAAA	-38	NA	14838037	14819244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14820159_14825478_14825621_14828144_14828273_14837831
transcript_15628.known	chr10	+	1762	14	FSM	ENSG00000187522.16	ENST00000378372.8	1762	14	0	0	0	0	multi-exon	TRUE	canonical	3	343	junction_5	45.1892797676303	1227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCAACCCTTTGTTTT	-12	True	NA	24	True	ATTAAA	-18	NA	14838305	14871741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849720_14849812_14851218_14851324_14852369_14852532_14854124_14854281_14855840_14855944_14867082_14867296_14867735_14867910_14870596_14870668_14871527
transcript_15629.known	chr10	+	4660	5	FSM	ENSG00000284024.4	ENST00000640019.3	4660	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	190.42895656911	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGGTCAGTCCACTAC	-12	True	NA	18	True	AATAAA	-18	NA	14838305	14846999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14842133_14842847_14843370
transcript_15630.known	chr10	+	1689	4	FSM	ENSG00000284024.4	ENST00000645667.1	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	214.495273193192	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTCATATTATTTG	-16	True	NA	21	True	ATTAAA	-14	NA	14838301	14844737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14843370
transcript_15631.known	chr10	-	999	1	FSM	ENSG00000272853.1	ENST00000609399.1	999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTAGCCGTCTTAAA	15	False	14878701	NA	False	ATTAAA	-33	NA	14878686	14877687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14877700_14878700
transcript_15632.known	chr10	-	2463	15	FSM	ENSG00000152457.18	ENST00000378258.5	2463	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	9.63332862556672	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	15	True	NA	NA	False	NA	NA	NA	14954072	14908170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14947524_14947610_14949035_14949088_14953901
transcript_15633.known	chr10	-	5960	14	FSM	ENSG00000152457.18	ENST00000378278.7	5960	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	7.06688250944975	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTACTGAAAATAGTC	-9	True	NA	NA	False	AATAAA	-16	NA	14954096	14904612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_15636.known	chr10	-	2637	13	FSM	ENSG00000152457.18	ENST00000378246.6	2637	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	9.91071249821234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	14954095	14907878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_15637.known	chr10	-	2246	12	FSM	ENSG00000152457.18	ENST00000378249.5	2246	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	12.5296342938328	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-1	True	NA	NA	False	NA	NA	NA	14954048	14908170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14953901
transcript_1564.known	chr1	+	1734	5	FSM	ENSG00000132879.14	ENST00000376762.8	1734	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	56.7334777710657	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	19	True	NA	17	True	AATAAA	-18	NA	11654909	11662291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_15640.known	chr10	+	719	6	FSM	ENSG00000152455.16	ENST00000433779.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	87.1242790501017	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTCAGAACAGTATGTAAA	-18	True	NA	NA	False	AAAAAG	-2	NA	14878847	14902456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14878961_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_15653.known	chr10	+	2959	5	FSM	ENSG00000152455.16	ENST00000378331.5	2959	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	36.0442436458306	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	19	False	NA	NA	False	NA	NA	NA	14878819	14904315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14878920_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_15654.known	chr10	+	3059	6	FSM	ENSG00000152455.16	ENST00000354919.11	3059	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	70.9608342679256	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	0	True	NA	NA	False	NA	NA	NA	14878865	14904315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14878920_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_15655.known	chr10	+	1292	6	FSM	ENSG00000152455.16	ENST00000378325.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	76.9716831048925	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	-3	True	NA	9	True	ATTAAA	-9	NA	14878862	14903085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14878920_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_15656.known	chr10	+	682	3	FSM	ENSG00000197889.10	ENST00000407572.6	682	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCCATTTTATTT	8	True	NA	NA	False	ATTAAA	-22	NA	14959387	14972857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14959558_14966439_14966607_14972512
transcript_15657.nnic	chr10	-	1508	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	19.1441897190766	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8830	False	NA	-3	True	ATTAAA	-21	NA	15088813	15075474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075849_15077747_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15661.nnic	chr10	-	1509	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	19.1441897190766	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8830	False	NA	-3	True	ATTAAA	-21	NA	15088813	15075474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075801_15077698_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15662.nnic	chr10	-	1508	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	19.1441897190766	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8830	False	NA	-3	True	ATTAAA	-21	NA	15088813	15075474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075820_15077718_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15663.nnic	chr10	-	1508	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	19.1441897190766	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8830	False	NA	-3	True	ATTAAA	-21	NA	15088813	15075474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075897_15077795_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15664.nnic	chr10	-	1465	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	19.1441897190766	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8830	False	NA	-3	True	ATTAAA	-21	NA	15088813	15075474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075923_15077864_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15665.nnic	chr10	-	1510	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	19.1441897190766	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	8830	False	NA	-3	True	ATTAAA	-21	NA	15088813	15075474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075935_15077831_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15666.nnic	chr10	-	1080	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-37	-1031	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	18.7132974111993	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACAAGTCTGTCCATAG	8830	False	NA	NA	False	AAAACA	-28	NA	15088813	15076505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15076569_15077864_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15667.nnic	chr10	-	1068	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-37	-1033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.1441897190766	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTACAAGTCTGTCCAT	8830	False	NA	NA	False	AAAACA	-26	NA	15088813	15076507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15076549_15077854_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15669.known	chr10	-	3370	4	FSM	ENSG00000176244.7	ENST00000356189.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	2.16024689946929	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-1	True	NA	-3	True	ATTAAA	-21	NA	15088776	15075474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15078604_15078690_15078754_15078922_15079041_15088716
transcript_15674.known	chr10	-	2457	13	FSM	ENSG00000152465.18	ENST00000378150.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	25.3227774060342	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTTGAACCTGAGAGG	7	True	NA	NA	False	NA	NA	NA	15168628	15108293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15140986_15141030_15141421_15141558_15168502
transcript_15678.nic	chr10	-	1859	12	NIC	ENSG00000152465.18	novel	5003	12	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	20.1178346928111	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTAGGACTTTACTTCC	18	True	NA	16	True	AGTAAA	-33	NA	15168669	15106372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_15106699_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_1568.nic	chr1	-	1028	5	ISM	ENSG00000116661.11	ENST00000354287.5	1287	6	3743	0	27	0	3prime_fragment	FALSE	canonical	3	404	junction_3	16.2326830807479	2831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATGAATGAAAAAATGGA	4132	False	NA	-39	True	AATAAA	-19	NA	11650686	11648386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_11648829_11649086_11649226_11649778_11649875_11649944_11650075_11650465
transcript_15680.known	chr10	-	5003	12	FSM	ENSG00000152465.18	ENST00000378165.9	5003	12	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_4	8.96826360373711	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAGTTTCTTGTAGATT	-6	True	NA	NA	False	ATTAAA	-45	NA	15168693	15105769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_15691.known	chr10	+	1296	3	FSM	ENSG00000152464.15	ENST00000378203.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	36.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCATAGGGTCCTG	-11	True	NA	8	True	AATAAA	-15	NA	15097179	15104251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_15097410_15102217_15102337_15103304
transcript_15692.known	chr10	+	1484	3	FSM	ENSG00000152464.15	ENST00000378197.5	1484	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	45	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATAGGGTCCTGTTTGGT	-11	True	NA	14	True	AATAAA	-21	NA	15097354	15104257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_15097767_15102217_15102337_15103304
transcript_15693.known	chr10	+	1030	2	FSM	ENSG00000152464.15	ENST00000378202.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATAGGGTCCTGTTTG	83	False	NA	12	True	AATAAA	-19	NA	15097330	15104255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_15097410_15103304
transcript_15694.nnic	chr10	+	1007	2	NIC	ENSG00000152464.15	novel	1484	3	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATAGGGTCCTGTTTGGT	-21	True	NA	14	True	AATAAA	-21	NA	15097344	15104257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_15097399_15103304
transcript_15695.known	chr10	+	863	2	FSM	ENSG00000152464.15	ENST00000441850.1	863	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTCATTGGCTTAAAAT	19	False	NA	NA	False	NA	NA	NA	15097419	15103820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_15097767_15103304
transcript_15696.known	chr10	-	1714	2	FSM	ENSG00000176236.6	ENST00000624760.1	1714	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTAGTGCTTGTGTTT	324	False	NA	NA	False	AATAAA	-19	NA	15097319	15095384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15096866_15097086
transcript_15697.nic	chr10	-	280	2	ISM	ENSG00000152465.18	ENST00000378150.1	2457	13	-96	33206	-31	-8683	5prime_fragment	FALSE	canonical	3	76	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACCAAATTCCGGAGG	-7	False	NA	NA	False	AAAAAG	-28	NA	15168724	15141499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_15141558_15168502
transcript_15698.known	chr10	-	4182	8	FSM	ENSG00000148468.17	ENST00000378116.9	4182	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	14.8103659230794	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTGTGGTCATTTGA	-22	True	NA	-4	True	AATAAA	-19	NA	15371289	15211642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15214602_15215995_15216111_15220943_15221061_15248638_15248816_15254720_15254880_15275854_15275948_15283877_15284106_15370955
transcript_15705.known	chr10	-	2364	15	FSM	ENSG00000148481.14	ENST00000277632.8	2364	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_11	13.2003787824441	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	-18	True	NA	-4	True	AATAAA	-16	NA	15860507	15778173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_15709.known	chr10	-	2307	14	FSM	ENSG00000148481.14	ENST00000477891.1	2307	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	20.9866116803663	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCATTTTTTACATT	-9	True	NA	0	True	AATAAA	-20	NA	15860498	15778169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_15711.nnic	chr10	-	2335	14	NIC	ENSG00000148481.14	novel	2364	15	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_5	21.6633740481008	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	NA	False	NA	-4	True	AATAAA	-16	NA	15860559	15778173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_1573.known	chr1	+	1444	6	FSM	ENSG00000116663.11	ENST00000376753.9	1444	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	2.41660919471891	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGGGTTGGTTTTA	-13	True	NA	NA	False	AATAAA	-30	NA	11664199	11674354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11664256_11668655_11668945_11671265_11671393_11671927_11672024_11673276_11673413_11673614
transcript_15733.known	chr10	+	3777	6	FSM	ENSG00000165983.15	ENST00000378000.5	3777	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.0724932822114	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATCTAAATGTATT	12	False	NA	NA	False	AATAAA	-15	NA	16436983	16513737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_16437048_16437356_16437491_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_15741.known	chr10	+	3625	5	FSM	ENSG00000165983.15	ENST00000535784.7	3625	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.8857705285386	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	1	True	NA	NA	False	AATAAA	-23	NA	16437009	16513745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_16437048_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_15747.known	chr10	+	3212	4	FSM	ENSG00000165983.15	ENST00000423462.6	3212	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	18.1169043222683	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	NA	False	NA	NA	False	AATAAA	-23	NA	16436942	16513745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_16437048_16486351_16486618_16505019_16505161_16511045
transcript_15755.known	chr10	-	3730	9	FSM	ENSG00000148484.18	ENST00000345264.10	3730	9	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_7	75.5033111856692	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTCATGGTATATT	-25	True	NA	1	True	ATTAAA	-24	NA	16817424	16590610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
transcript_15764.known	chr10	-	955	8	FSM	ENSG00000148484.18	ENST00000377911.1	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_7	173.368311489071	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGCTGCGTGTGAGGC	73	False	NA	-24	True	AATAAA	-1	NA	16817463	16593312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16817314
transcript_15766.known	chr10	-	8230	12	FSM	ENSG00000107614.22	ENST00000354631.7	8230	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	82.1249803451679	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGACAAAAGGTTCAGG	-12	True	NA	NA	False	AATAAA	-10	NA	17201672	17142253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17169309_17169540_17174550_17174661_17201570
transcript_15771.known	chr10	-	12918	11	FSM	ENSG00000107614.22	ENST00000377799.8	12918	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	33.6881284728018	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGGTCAAGGACTTCG	-12	True	NA	NA	False	AATAAA	-20	NA	17201672	17137335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
transcript_15791.nic	chr10	-	1612	9	NIC	ENSG00000107614.22	novel	12918	11	NA	NA	41	274	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	69.8959047441265	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATTCTAATTCTAGCC	NA	False	NA	-44	True	ATTAAA	-27	NA	17201810	17148641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17168840_17168918_17174550_17174661_17201570
transcript_15795.known	chr10	-	1374	9	FSM	ENSG00000107614.22	ENST00000495022.5	1374	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	93.0751544452116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGGATTTTATTAAA	NA	False	NA	-45	True	ACTAAA	-24	NA	17201851	17148915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17162165_17162238_17174550_17174661_17201570
transcript_15812.known	chr10	-	711	3	FSM	ENSG00000107614.22	ENST00000479046.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	117.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATTTTTCTAGAATG	NA	False	NA	NA	False	AATAAA	-6	NA	17202054	17171907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17172025_17174550_17174661_17201570
transcript_15814.nnic	chr10	-	575	3	NNC	ENSG00000107614.22	novel	12918	11	NA	NA	41	-817	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	111.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTATATTTATCTATA	NA	False	NA	5	True	ATTAAA	-40	NA	17201810	17172724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_17172950_17174550_17174661_17201570
transcript_15815.nic	chr10	-	1121	2	ISM	ENSG00000107614.22	ENST00000479046.1	711	3	244	1872	41	-1872	5prime_fragment	FALSE	canonical	3	237	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAAATTGTGTTGT	NA	False	NA	NA	False	NA	NA	NA	17201810	17173779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_17174661_17201570
transcript_15826.nic	chr10	+	1443	8	ISM	ENSG00000026025.16	ENST00000224237.9	1868	9	1089	0	-242	0	3prime_fragment	FALSE	canonical	3	597	junction_1	86.0206429899717	1806	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTTATTTATTG	167	False	NA	25	True	AATAAA	-16	NA	17230366	17237593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_17230711_17233586_17233683_17233769_17233932_17234692_17234819_17235168_17235390_17235845_17235890_17236293_17236380_17237229
transcript_15828.known	chr10	-	918	3	FSM	ENSG00000229124.8	ENST00000605833.2	1901	3	33	950	33	-864	multi-exon	FALSE	canonical	2	5	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTAGAAATTCCAACT	-13	True	NA	NA	False	NA	NA	NA	17229985	17215195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17215365_17216166_17216275_17229344
transcript_15829.known	chr10	-	1233	2	FSM	ENSG00000229124.8	ENST00000664157.2	1330	2	85	12	85	-10	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGGATATGCTAGTG	4458	False	NA	-9	True	AATAAA	-8	NA	17216290	17214255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17215365_17216166
transcript_15836.known	chr10	+	557	3	FSM	ENSG00000204832.10	ENST00000457649.6	557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGTGTCCATATTAGCTA	0	True	NA	NA	False	ATTAAA	-19	NA	17386935	17408286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_17387076_17399104_17399203_17407967
transcript_15837.known	chr10	-	2234	7	FSM	ENSG00000165996.14	ENST00000361271.8	2234	7	0	0	0	0	multi-exon	TRUE	canonical	3	270	junction_3	18.3363633859668	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTTCATAACTGCCTT	6	True	NA	NA	False	AATAAA	-39	NA	17617374	17589031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17590447_17594204_17594384_17599289_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_15843.known	chr10	-	717	5	FSM	ENSG00000165996.14	ENST00000466335.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	17.4427635425124	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTGAGACAAATTGTG	145	False	NA	-2	True	AATAAA	-15	NA	17617235	17599073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_15848.known	chr10	-	2595	1	FSM	ENSG00000260589.1	ENST00000563601.1	2595	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTCATGCCTGT	329	False	NA	NA	False	ATTAAA	-19	NA	17643878	17641283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17641300_17643900
transcript_15851.known	chr10	+	3856	14	FSM	ENSG00000136738.15	ENST00000377524.8	3856	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	18.8808158483841	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTGTTAGTTTAT	-15	True	NA	NA	False	TATAAA	-26	NA	17644150	17716824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221_17693313_17695048_17695242_17696774_17696870_17700190_17700280_17704430_17704519_17704969_17705025_17705587_17705742_17708775_17708952_17714542
transcript_15854.nic	chr10	+	707	6	ISM	ENSG00000136738.15	ENST00000377524.8	3856	14	-14	23543	-14	0	5prime_fragment	FALSE	canonical	3	195	junction_4	14.5794375748861	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAGAAGAAGA	4	False	NA	NA	False	NA	NA	NA	17644136	17693281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221
transcript_15856.known	chr10	+	740	7	FSM	ENSG00000136738.15	ENST00000445846.1	740	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	101.030385968227	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAGAAGAAGA	0	True	NA	NA	False	NA	NA	NA	17644207	17693281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_17644380_17660463_17660549_17672974_17673079_17684674_17684751_17684831_17684928_17688026_17688174_17693221
transcript_15858.nic	chr10	+	2242	3	ISM	ENSG00000165995.23	ENST00000352115.10	1911	14	-70	135842	-70	84235	5prime_fragment	TRUE	canonical	1	5	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAGAAAGAATGAATAA	245	False	NA	NA	False	NA	NA	NA	18140666	18403882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_18140857_18150882_18150976_18401923
transcript_15860.known	chr10	-	2166	11	FSM	ENSG00000241058.4	ENST00000377304.7	2166	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	13.1011449881299	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTATGAAAAGTTGTT	26	True	NA	-10	True	AATAAA	-15	NA	18651587	18545560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614459_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
transcript_15869.known	chr10	-	553	3	FSM	ENSG00000241058.4	ENST00000607346.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCATCCATCTTTTCA	-1	True	NA	NA	False	NA	NA	NA	18659285	18653283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_18653460_18654852_18655176_18659231
transcript_15872.known	chr10	-	524	2	FSM	ENSG00000241058.4	ENST00000444660.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCTTGGACTCCTGAC	-17	True	NA	NA	False	NA	NA	NA	18659267	18654687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_18655176_18659231
transcript_15875.known	chr10	+	7170	6	FSM	ENSG00000165997.5	ENST00000377275.4	7170	6	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_3	28.0042853863476	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTGAATCCAGTGTTTT	-5	True	NA	18	True	AATAAA	-18	NA	18659430	18681639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_18659684_18666574_18666636_18668529_18668678_18672621_18672706_18673983_18674136_18675167
transcript_15876.known	chr10	+	1761	12	FSM	ENSG00000204740.11	ENST00000377265.3	1761	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.21287855128421	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTCTTGTTTTTCTTTG	16	True	NA	NA	False	AATAAA	-15	NA	19489093	19734476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_19489174_19491516_19491646_19498484_19498647_19531193_19531352_19567501_19567704_19595193_19595458_19607776_19607903_19615856_19615924_19692281_19692362_19692457_19692555_19730705_19730782_19734156
transcript_15879.nic	chr10	+	1248	3	ISM	ENSG00000204740.11	ENST00000377265.3	1761	12	-64	235017	-64	-31843	5prime_fragment	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGCCTATGCAGCAAG	46	False	NA	NA	False	AATAGA	-14	NA	19489029	19499459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_19489174_19491516_19491646_19498484
transcript_1588.nnic	chr1	-	1032	9	NNC	ENSG00000116670.15	novel	1053	9	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	3	973	junction_8	695.152040473881	5861	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	NA	False	NA	-20	True	AATAAA	-23	NA	11691840	11674479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691751
transcript_15882.known	chr10	+	12275	14	FSM	ENSG00000120594.17	ENST00000377252.5	12275	14	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	19.6938100388461	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTGTCTTTATG	-1	True	NA	36	True	ATTAAA	-41	NA	19816431	20289856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_19817192_20001774_20001987_20046868_20047016_20068169_20068240_20143294_20143418_20147783_20147903_20164467_20164568_20176998_20177095_20177327_20177410_20211668_20211730_20217425_20217577_20219063_20219103_20245344_20245506_20279702
transcript_15886.nnic	chr10	-	806	3	NNC	ENSG00000285852.1	novel	2349	2	NA	NA	-1407	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAACAGCTAACATAACTC	8144	False	NA	NA	False	AATAAA	-18	NA	19817685	19812371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_19812844_19814401_19814467_19817416
transcript_15897.nnic	chr10	-	718	2	NNC	ENSG00000078114.19	novel	6789	9	NA	NA	-263	-88920	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAATTATCTAAATTAA	NA	False	NA	NA	False	AAAAAG	-6	NA	21293274	21260466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_21260740_21292829
transcript_15910.known	chr10	-	3799	2	FSM	ENSG00000204682.8	ENST00000658000.1	3799	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTCTTTGTGATTAAA	14	True	NA	-4	True	AATAAA	-21	NA	21497260	21492657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_21495946_21496749
transcript_15911.known	chr10	+	5143	23	FSM	ENSG00000078403.17	ENST00000307729.12	5143	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	26.6040759941805	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCATTCTCATTTG	-12	True	NA	15	True	AATAAA	-19	NA	21534231	21743630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349_21673920_21681331_21681377_21682224_21682258_21713771_21713951_21726243_21726356_21727855_21727929_21730899_21731055_21732898_21733088_21733503_21733593_21733767_21734130_21735138_21735236_21740029_21740237_21741938
transcript_15924.nic	chr10	+	1696	11	NIC	ENSG00000078403.17	novel	5203	26	NA	NA	-31	214	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	20.7374058165432	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAATAAACAAAGT	-43	True	NA	NA	False	AAGAAA	-19	NA	21534200	21673700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111_21617208_21651672_21651769_21670448_21670705_21673349
transcript_15938.nic	chr10	+	993	8	NIC	ENSG00000078403.17	novel	5203	26	NA	NA	-31	2283	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	23.8318942527334	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGATTTGTTGTTGC	-43	True	NA	NA	False	GATAAA	-22	NA	21534200	21617207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111
transcript_15940.nic	chr10	+	1013	8	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	-25	126423	-25	2283	5prime_fragment	FALSE	canonical	3	36	junction_1	19.8761471238718	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGATTTGTTGTTGC	-37	True	NA	NA	False	GATAAA	-22	NA	21534206	21617207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830_21614925_21617111
transcript_15948.known	chr10	+	573	6	FSM	ENSG00000078403.17	ENST00000651097.1	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	24.1627812968623	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATTTCTCTTGGATT	4	True	NA	NA	False	NA	NA	NA	21524645	21614924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21524776_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830
transcript_15953.known	chr10	+	564	6	FSM	ENSG00000078403.17	ENST00000650772.1	564	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	28.1112077293026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGATGTTTCCATTGTT	66	False	NA	NA	False	AATAAA	-33	NA	21534439	21612451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330_21595441_21612347
transcript_15961.nic	chr10	+	1908	5	ISM	ENSG00000078403.17	ENST00000650772.1	564	6	-239	15802	-31	1067	5prime_fragment	FALSE	canonical	3	24	junction_1	31.2839815240963	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATGTTTGAAAGAG	-43	True	NA	NA	False	AGTAAA	-13	NA	21534200	21596649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330
transcript_15962.known	chr10	+	1062	5	FSM	ENSG00000078403.17	ENST00000377091.7	1062	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	39.6319000301525	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	7	True	NA	18	True	AATAAA	-20	NA	21534344	21557182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21551815_21551922_21556642
transcript_15963.nic	chr10	+	1928	5	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	-25	146981	-25	1067	5prime_fragment	FALSE	canonical	3	36	junction_1	26.1951808545007	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAAATGTTTGAAAGAG	-37	True	NA	NA	False	AGTAAA	-13	NA	21534206	21596649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330
transcript_15965.nic	chr10	+	972	4	NIC	ENSG00000078403.17	novel	381	4	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	37.3452361977624	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	6107	False	NA	18	True	AATAAA	-20	NA	21524583	21557182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_21524776_21534644_21534805_21538832_21538913_21556642
transcript_15967.known	chr10	+	785	4	FSM	ENSG00000078403.17	ENST00000652497.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	33.7276675083759	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTCACTTCTTCAAATG	14	False	NA	4	True	AATAAA	-6	NA	21534475	21557168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21534495_21534644_21534805_21538832_21538913_21556642
transcript_15970.known	chr10	+	1069	4	FSM	ENSG00000078403.17	ENST00000377100.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	31.0948370133836	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	-12	True	NA	18	True	AATAAA	-20	NA	21534231	21557182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21556642
transcript_15977.known	chr10	+	647	2	FSM	ENSG00000078403.17	ENST00000468309.1	647	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTAGAACAGTCCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	21668971	21671014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21669053_21670448
transcript_15979.known	chr10	-	6601	4	FSM	ENSG00000180592.17	ENST00000449193.7	6601	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCCATACATTTCTAC	1549	False	NA	-7	True	ATTAAA	-18	NA	21525682	21513474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_21519659_21521388_21521481_21523682_21523872_21525546
transcript_1598.known	chr1	-	1053	9	FSM	ENSG00000116670.15	ENST00000376692.9	1053	9	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_8	689.030659695198	6981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-10	True	NA	-20	True	AATAAA	-23	NA	11681148	11674479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
transcript_15981.nnic	chr10	+	1017	2	Antisense	novelGene_ENSG00000180592.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTTTCG	5433	False	NA	22	True	NA	NA	NA	21516217	21518045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_21516731_21517541
transcript_15983.nic	chr10	-	606	2	ISM	ENSG00000180592.17	ENST00000449193.7	6601	4	-192	10119	-192	-4086	5prime_fragment	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTTCTGGATATTTGT	1357	False	NA	NA	False	AATAAA	-26	NA	21525874	21523593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_21523872_21525546
transcript_15984.known	chr10	-	456	3	FSM	ENSG00000180592.17	ENST00000487107.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGCCTTGGGATCGTG	3336	False	NA	NA	False	NA	NA	NA	21523895	21519507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_21519659_21521388_21521481_21523682
transcript_15985.known	chr10	+	296	1	FSM	ENSG00000286881.1	ENST00000671070.1	296	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGACATACATGCTTTT	-2	True	NA	NA	False	AATAAA	-28	NA	21526567	21526863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21526600_21526900
transcript_15986.known	chr10	-	2100	12	FSM	ENSG00000136770.11	ENST00000376980.8	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	19.2731560844234	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	-16	True	NA	-11	True	AATAAA	-15	NA	22003730	21756547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21882281_21882440_21904521_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
transcript_15989.nnic	chr10	-	1125	5	NNC	ENSG00000136770.11	novel	2100	12	NA	NA	53417	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	79.4638282490845	311	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	NA	False	NA	-11	True	AATAAA	-15	NA	21807489	21756547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21807190
transcript_1599.known	chr1	-	1002	9	FSM	ENSG00000116670.15	ENST00000376672.5	1002	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_4	1048.27068903981	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGAGTTGTTTCAAT	-2	True	NA	1	True	NA	NA	NA	11691477	11674524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_15993.known	chr10	+	327	1	FSM	ENSG00000227462.1	ENST00000426373.1	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACCCAGGACTAGAAGGA	NA	False	NA	NA	False	NA	NA	NA	22225697	22226024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22225700_22226000
transcript_15994.known	chr10	+	3540	10	FSM	ENSG00000168283.14	ENST00000376663.8	3540	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	7.14056400580428	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGTGAATTTAACTCAT	12	True	NA	6	True	AGTAAA	-20	NA	22321098	22331484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22321697_22326430_22326562_22326889_22326987_22327594_22327651_22327741_22327793_22327949_22328059_22328133_22328180_22328599_22328699_22329047_22329129_22329212
transcript_15995.known	chr10	+	926	8	FSM	ENSG00000148444.16	ENST00000376836.8	926	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	3.22616851161035	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	-22	True	NA	13	True	AATAAA	-22	NA	22316387	22320306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318652_22318714_22318805_22318863_22318958_22319019_22319938
transcript_16.known	ERCC-00041	+	1121	1	FSM	ERCC-00041A	EF011069	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00041_+_0_1100
transcript_1600.known	chr1	+	7365	7	FSM	ENSG00000162490.7	ENST00000294485.6	7365	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	4.53688586293873	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTGTCTCTCTTTGT	-7	True	NA	21	True	AATAAA	-21	NA	11691709	11725857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11691854_11706248_11706710_11709274_11709466_11711850_11711966_11712339_11712430_11715118_11715209_11719583
transcript_16000.known	chr10	+	1150	7	FSM	ENSG00000148444.16	ENST00000496071.5	1150	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	34.3009556070316	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	19	True	NA	13	True	AATAAA	-22	NA	22316428	22320306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318352_22318714_22318805_22318863_22318958_22319019_22319938
transcript_16002.known	chr10	+	757	6	FSM	ENSG00000148444.16	ENST00000444869.5	757	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	38.1051177665153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTGTTTTCCACAAAG	10	True	NA	-6	True	AATAAA	-3	NA	22316419	22320287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318958_22319019_22319938
transcript_16006.known	chr10	+	1407	5	FSM	ENSG00000148444.16	ENST00000463688.6	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	3.16227766016838	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	31	True	NA	13	True	AATAAA	-22	NA	22316440	22320306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22319019_22319938
transcript_16008.known	chr10	+	1344	4	FSM	ENSG00000148444.16	ENST00000468179.6	1344	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCTATTCATGATGAG	-11	True	NA	NA	False	AATAAA	-23	NA	22316398	22319281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271
transcript_16012.known	chr10	+	2290	5	FSM	ENSG00000148444.16	ENST00000602574.5	2290	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	3.49106001094224	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	-24	True	NA	13	True	AATAAA	-22	NA	22316385	22320306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318714_22318805
transcript_16013.known	chr10	+	2568	11	FSM	ENSG00000077327.16	ENST00000376624.8	2568	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.28254244210267	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAATTGTCCTTTTCATT	4	True	NA	6	True	AATAAA	-20	NA	22345495	22417610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22345637_22345722_22345819_22364852_22365020_22368494_22368679_22386753_22386960_22387822_22387997_22389159_22389313_22391728_22391921_22401160_22401278_22411030_22411177_22416618
transcript_1602.known	chr1	+	1067	4	FSM	ENSG00000177674.16	ENST00000376637.7	1067	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	371.58130559363	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACAACCTCCAGCCTCC	9	False	NA	-46	True	NA	NA	NA	11736083	11750710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11736236_11747439_11747546_11748414_11748590_11750076
transcript_16021.known	chr10	-	3820	10	FSM	ENSG00000150867.14	ENST00000376573.9	3820	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	7.45024649521787	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTAGTTTCTAGAGCC	4	True	NA	-16	True	AAGAAA	-17	NA	22714578	22534853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_22537282_22539970_22540075_22541803_22542048_22550658_22550773_22567850_22567890_22573310_22573458_22591628_22591782_22607926_22608024_22609619_22609718_22714182
transcript_16026.known	chr10	+	1730	5	FSM	ENSG00000148450.13	ENST00000376510.8	1730	5	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	7.94905654779232	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTTTGGCTAAGT	2	True	NA	NA	False	AATAAA	-18	NA	23095578	23122013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_23095727_23104143_23104245_23110241_23110319_23119303_23119452_23120757
transcript_16034.known	chr10	+	7407	21	FSM	ENSG00000120549.18	ENST00000376454.8	7407	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	10.9328633029047	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCTTTTTTTCTTTTGA	-14	True	NA	NA	False	AATAAA	-13	NA	24209137	24547843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_24209264_24219625_24219910_24380868_24381068_24432994_24433194_24438385_24438480_24473227_24474061_24494499_24494605_24495146_24495197_24501378_24501546_24513258_24513435_24520122_24520254_24521781_24521930_24524322_24524765_24527935_24528120_24531829_24531994_24533069_24533238_24536773_24536894_24542692_24542771_24542882_24544482_24544980_24545104_24545826
transcript_16037.known	chr10	-	1939	9	FSM	ENSG00000099256.19	ENST00000320152.11	1939	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	10.3319891598859	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTACTGTTTTTCT	-15	True	NA	-2	True	AATAAA	-26	NA	24952606	24848613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_24849892_24851387_24851465_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_1604.known	chr1	+	1130	5	FSM	ENSG00000177674.16	ENST00000314340.10	1130	5	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_4	104.505980690102	2596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCTGTGTTTTGAACC	-17	True	NA	13	True	ATTAAA	-18	NA	11736135	11750769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748611_11750076
transcript_16040.known	chr10	-	747	8	FSM	ENSG00000099256.19	ENST00000376378.5	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	24.6021402752372	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTTCTGAGGTTAAT	7	True	NA	NA	False	TATAAA	-26	NA	24952584	24849706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_24849892_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_16043.known	chr10	-	741	4	FSM	ENSG00000099256.19	ENST00000376376.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	32.4276973520408	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGTCTTCTAGTTCT	-1	True	NA	NA	False	GATAAA	-21	NA	24952592	24908300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_24908686_24937183_24937368_24942329_24942437_24952527
transcript_16046.known	chr10	+	273	1	FSM	ENSG00000273107.1	ENST00000610158.1	273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTGTATGAGTCTGT	868	False	NA	6	True	ACTAAA	-26	NA	24953240	24953513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_24953200_24953500
transcript_16049.known	chr10	+	3737	3	FSM	ENSG00000185875.13	ENST00000376356.5	3737	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	2	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	-19	True	NA	NA	False	ATTAAA	-16	NA	25016611	25026664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_25016693_25021741_25021909_25023175
transcript_1605.known	chr1	+	1100	5	FSM	ENSG00000177674.16	ENST00000376629.8	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	285.335767123577	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGTTTTGAACCAC	-6	True	NA	15	True	ATTAAA	-20	NA	11736146	11750771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748590_11750076
transcript_16050.known	chr10	+	3788	3	FSM	ENSG00000185875.13	ENST00000524413.5	3788	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	27	True	NA	NA	False	ATTAAA	-16	NA	25016657	25026664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_25016790_25021741_25021909_25023175
transcript_16051.known	chr10	-	1318	5	FSM	ENSG00000151023.17	ENST00000376363.5	1318	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTTTTTTTTTTTTTTTTC	-34	True	NA	NA	False	AATAAA	-18	NA	25016156	24984401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_24984906_24990462_24990610_24995645_24995870_24999400_24999547_25015859
transcript_16052.known	chr10	-	2433	2	FSM	ENSG00000233642.1	ENST00000449643.1	2433	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	AAGAAA	-44	NA	25176276	25158071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_25159904_25175675
transcript_16055.known	chr10	+	2723	8	FSM	ENSG00000095777.17	ENST00000376302.5	2723	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	8.91227083456127	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAGCTTTATCGCTAA	-4	True	NA	NA	False	AATAAA	-15	NA	25934273	26023481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502
transcript_16060.nnic	chr10	+	1301	5	NNC	ENSG00000095777.17	novel	2723	8	NA	NA	-48	-60212	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	15.8961473319795	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGCTTCATTTTTGT	20	False	NA	15	True	ATTAAA	-18	NA	25934180	25956703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25955957
transcript_16065.known	chr10	-	3515	10	FSM	ENSG00000136754.18	ENST00000376160.5	3515	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	76.6434747530553	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	108	False	NA	-14	True	AATAAA	-25	NA	26860973	26746592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_16066.known	chr10	-	3441	9	FSM	ENSG00000136754.18	ENST00000376166.5	3441	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	105.91734690314	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-3	True	NA	-14	True	AATAAA	-25	NA	26860986	26746592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_16068.nnic	chr10	-	816	4	NIC	ENSG00000283709.1	novel	3620	5	NA	NA	-1588	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTACAGTATTTCTATAA	6306	False	NA	NA	False	AATAAA	-30	NA	26939447	26931205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_26931563_26934412_26934517_26935424_26935628_26939295
transcript_16070.known	chr10	-	6775	34	FSM	ENSG00000107890.17	ENST00000376087.5	6775	34	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_31	7.39977415087314	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGACACGATG	-9	True	NA	-80	True	AATATA	-34	NA	27100494	27004115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27005724_27006916_27006963_27012881_27013111_27014493_27014712_27017501_27017793_27022557_27022688_27024446_27024560_27028851_27028946_27029285_27029357_27033224_27033378_27034795_27035753_27037185_27037324_27037870_27038055_27039964_27040179_27043425_27043568_27044156_27044191_27046352_27046524_27048800_27048980_27053319_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_16073.known	chr10	-	2489	13	FSM	ENSG00000107890.17	ENST00000676299.1	2489	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	12.5753285797584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATCCCAGCACTTTGG	137	False	NA	NA	False	NA	NA	NA	27100377	27063035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27080648_27080772_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_16079.known	chr10	-	3994	20	FSM	ENSG00000136758.20	ENST00000326799.7	3994	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_17	321.765584568553	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCTGTATATGGTCTT	1625	False	NA	NA	False	ATTAAA	-23	NA	27154359	27110453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27147497_27147669_27148905_27149041_27154177
transcript_1608.known	chr1	+	1062	12	FSM	ENSG00000011021.23	ENST00000376492.3	1062	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	38.6146463028073	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTCCAGCTCCAGG	27	False	NA	NA	False	NA	NA	NA	11806262	11829303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826215_11827088_11827222_11828105_11828220_11829195
transcript_16083.known	chr10	-	4191	19	FSM	ENSG00000136758.20	ENST00000376016.8	4191	19	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_13	136.403733068643	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAAAGATGTTGTGTG	-6	True	NA	60	True	GATAAA	-17	NA	27154384	27110110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27142386_27142486_27145427_27145591_27148905_27149041_27154177
transcript_16085.known	chr10	-	4127	18	FSM	ENSG00000136758.20	ENST00000613434.4	4127	18	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_15	255.267781238464	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGAAAGATGTTGTGT	1564	False	NA	59	True	GATAAA	-16	NA	27154420	27110111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27112121_27114520_27114608_27116059_27116134_27116218_27116346_27117575_27117728_27119293_27119450_27120434_27120548_27121385_27121449_27122840_27122974_27123546_27123700_27126695_27126787_27131858_27131942_27134038_27134123_27134830_27134982_27136275_27136386_27145427_27145591_27148905_27149041_27154177
transcript_1609.known	chr1	-	7018	12	FSM	ENSG00000177000.13	ENST00000376590.9	7018	12	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_11	6.36882905023163	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	-4	True	NA	NA	False	AATAAA	-22	NA	11805964	11785722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805887
transcript_16094.known	chr10	-	1747	13	FSM	ENSG00000107897.20	ENST00000375888.5	1747	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	51.4578441272293	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTAGTTTGTGATGAT	4	True	NA	NA	False	AATGAA	-23	NA	27240558	27197352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_16095.known	chr10	-	3903	13	FSM	ENSG00000107897.20	ENST00000396271.8	3903	13	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_12	31.281872635051	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	10	True	NA	0	True	AATAAA	-18	NA	27240797	27195213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_16096.known	chr10	-	3848	13	FSM	ENSG00000107897.20	ENST00000375905.8	3848	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	39.9884531945021	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGGCTTTTATTACTT	-28	True	NA	-3	True	AATAAA	-15	NA	27242130	27195216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27242058
transcript_16101.known	chr10	-	4173	12	FSM	ENSG00000107897.20	ENST00000375897.7	4173	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	19.3206950236876	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTTTTATTACTTGT	2	True	NA	-1	True	AATAAA	-17	NA	27240879	27195214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_16102.known	chr10	-	3616	12	FSM	ENSG00000107897.20	ENST00000678446.1	3616	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	54.3224228089535	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-13	True	NA	-16	True	AATAAA	-2	NA	27242115	27195229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27242058
transcript_16104.known	chr10	-	3698	12	FSM	ENSG00000107897.20	ENST00000677667.1	3698	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	48.5750675767172	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-5	True	NA	-16	True	AATAAA	-2	NA	27240812	27195229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_16118.known	chr10	-	3474	3	FSM	ENSG00000136758.20	ENST00000477432.1	3474	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	531	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTTGTTCCAATTA	718	False	NA	-6	True	AATAAA	-14	NA	27155266	27145418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27147669_27148905_27149041_27154177
transcript_16120.known	chr10	+	3623	12	FSM	ENSG00000120539.15	ENST00000375946.8	3623	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_8	40.0802913171314	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATTGTAATTTACTTG	307	False	NA	13	True	AATAAA	-17	NA	27154823	27186919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27180952_27181067_27181479_27181582_27186378
transcript_16121.known	chr10	+	4132	12	FSM	ENSG00000120539.15	ENST00000375940.9	4132	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	51.6179544649001	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATCTGTCAACATCATT	-4	True	NA	6	True	AATAAA	-18	NA	27155351	27187953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173117_27173260_27180952_27181067_27181479_27181582_27186378
transcript_16122.known	chr10	+	1622	3	FSM	ENSG00000120539.15	ENST00000477034.2	1622	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	42.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTAACCTCAAAACTGTA	9753	False	NA	-93	True	AATATA	-12	NA	27169943	27186718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27171084_27173117_27173260_27186378
transcript_16127.known	chr10	+	2622	8	FSM	ENSG00000099246.18	ENST00000621805.5	2622	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	329.694168735146	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTTGTGTAGGAAGTA	NA	False	NA	20	True	AATAAA	-20	NA	27504233	27539829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27531528_27531616_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_16128.known	chr10	+	1800	7	FSM	ENSG00000099246.18	ENST00000683755.1	1800	7	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	292.48285799722	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGTAGATTTTTTT	12	True	NA	33	True	AATAAA	-39	NA	27504311	27539185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533940_27533995_27537875
transcript_16129.known	chr10	+	835	6	FSM	ENSG00000099246.18	ENST00000683042.1	835	6	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_5	56.7612543906493	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTTTAACTGCTAT	-14	True	NA	NA	False	NA	NA	NA	27504285	27538107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533995_27537875
transcript_16130.known	chr10	+	985	6	FSM	ENSG00000099246.18	ENST00000465772.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	323.055784656458	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAAGAGCATGATTC	38	False	NA	-4	True	AATAGA	-34	NA	27504376	27538489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27537875
transcript_16131.known	chr10	+	870	4	FSM	ENSG00000099246.18	ENST00000683924.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	343.074659836926	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTGGGATGTTTGA	7	True	NA	19	True	AATAAA	-15	NA	27532536	27538512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27532580_27533734_27533854_27533927_27533999_27537875
transcript_16132.known	chr10	+	2267	8	FSM	ENSG00000099246.18	ENST00000684393.1	2267	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	341.019061050845	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGCTATTGTATATT	4	True	NA	21	True	AATAAA	-27	NA	27504303	27539173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27504438_27509874_27509931_27513962_27514421_27526827_27526890_27532506_27532580_27533734_27533854_27533927_27533995_27537875
transcript_16133.known	chr10	-	3603	20	FSM	ENSG00000169126.16	ENST00000305242.10	3603	20	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_19	5.96016322816508	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTTCATAGTTGTT	-19	True	NA	-5	True	AATAAA	-20	NA	27999079	27812167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27812626_27860624_27860847_27862433_27862623_27907662_27907778_27935009_27935253_27936725_27936881_27939896_27940008_27940562_27940806_27944221_27944432_27944815_27944963_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998993
transcript_1614.known	chr1	+	814	6	FSM	ENSG00000011021.23	ENST00000376497.7	814	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	61.9625693463401	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACATCAATGGCTGGG	16	False	NA	NA	False	AAAACA	-7	NA	11806212	11820779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11820361
transcript_16141.known	chr10	-	3486	20	FSM	ENSG00000169126.16	ENST00000673439.1	3486	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_19	6.84453398189847	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGAGAATATACGTATA	0	True	NA	-96	True	AATAAA	-20	NA	27998862	27812258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27812626_27860624_27860847_27862433_27862623_27907662_27907778_27935009_27935253_27936725_27936881_27939896_27940008_27940562_27940806_27944221_27944432_27944815_27944963_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998802
transcript_16142.known	chr10	+	3513	14	FSM	ENSG00000095787.24	ENST00000628285.3	3513	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	163.567694036886	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATAAAATTACCTTGAC	5	True	NA	NA	False	AATAAA	-16	NA	28532770	28620986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583405_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_16144.known	chr10	+	5554	14	FSM	ENSG00000095787.24	ENST00000442148.6	5554	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	135.416997875486	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCGGTGTGTTTCAATA	31	False	NA	NA	False	AATACA	-21	NA	28533748	28623112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_28533894_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_16148.known	chr10	-	2323	3	FSM	ENSG00000254635.6	ENST00000527986.5	2323	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	6	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTCCAACTTTTCA	-17	True	NA	NA	False	AATAAA	-23	NA	28532743	28522651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_28524612_28525947_28526009_28532441
transcript_16152.known	chr10	+	2176	13	FSM	ENSG00000095787.24	ENST00000375646.5	2176	13	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	185.213840375569	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGGGGGGTTAATTTA	18	True	NA	NA	False	TTTAAA	-14	NA	28532783	28619976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28608185_28608432_28610710_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_16153.known	chr10	+	1691	3	FSM	ENSG00000095739.11	ENST00000375533.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	28.5	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCATGTGCCTGTGTAATT	-3	True	NA	27	True	TTTAAA	-24	NA	28677520	28682932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_28677974_28681257_28681546_28681982
transcript_16155.known	chr10	-	489	1	FSM	ENSG00000229605.5	ENST00000480465.1	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAATAATAAAGG	NA	False	NA	NA	False	NA	NA	NA	28899484	28898995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_28899000_28899500
transcript_16157.known	chr10	-	563	6	FSM	ENSG00000197321.16	ENST00000674490.1	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	8.33306666239986	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	-4	True	NA	NA	False	AAGAAA	-20	NA	29735911	29555051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735754
transcript_16160.nnic	chr10	-	410	4	NNC	ENSG00000197321.16	novel	563	6	NA	NA	-973	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	21.0607586652418	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	NA	False	NA	NA	False	AAGAAA	-20	NA	29635945	29555051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_29555109_29563200_29563293_29569254_29569313_29635742
transcript_16162.known	chr10	-	6729	36	FSM	ENSG00000197321.16	ENST00000375400.7	6729	36	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_35	15.2958310980343	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGCATGTTCCTTTCT	-6	True	NA	-4	True	AATAAA	-42	NA	29735804	29457337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29529704_29529845_29530606_29530669_29531253_29531289_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735750
transcript_16163.known	chr10	-	613	4	FSM	ENSG00000197321.16	ENST00000674350.1	613	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.4251842554055	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAAAGAATTCTTAGAA	927	False	NA	NA	False	NA	NA	NA	29634959	29555078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_29555109_29563200_29563293_29569254_29569313_29634526
transcript_16165.known	chr10	-	9324	4	FSM	ENSG00000165757.9	ENST00000375377.2	9324	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	7.07106781186548	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTATGTCCGTTGTCTT	-30	True	NA	-6	True	AATAAA	-15	NA	30059586	30012802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_30017918_30026102_30029867_30047531_30047872_30059481
transcript_16170.nic	chr10	-	2654	9	NIC	ENSG00000107951.15	novel	5560	9	NA	NA	26	184	combination_of_known_junctions	FALSE	canonical	1	7	junction_8	234.018395377372	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATATTCCCAGTATTCC	143	False	NA	NA	False	AATAAA	-20	NA	30349135	30312825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30348856
transcript_16171.known	chr10	-	5560	9	FSM	ENSG00000107951.15	ENST00000263063.9	5560	9	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_6	56.808752626686	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTGCTGTCATTTC	0	True	NA	-15	True	AATAAA	-18	NA	30349278	30309800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30349118
transcript_16174.known	chr10	-	695	3	FSM	ENSG00000107951.15	ENST00000421701.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_2	28.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTATTGATGACTGGC	117	False	NA	NA	False	NA	NA	NA	30349161	30339971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_30340451_30341467_30341641_30349118
transcript_16177.known	chr10	+	408	2	FSM	ENSG00000230720.1	ENST00000416310.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACCATCTGAACACCGT	NA	False	NA	NA	False	ATTAAA	-21	NA	30723250	30723740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_30723337_30723418
transcript_16179.known	chr10	-	320	3	FSM	ENSG00000237036.6	ENST00000424191.1	320	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTTTCCCATGTATAG	2610	False	NA	NA	False	AATAAA	-15	NA	31318932	31307992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31308153_31309892_31310016_31318895
transcript_1618.nic	chr1	+	1365	6	ISM	ENSG00000011021.23	ENST00000376490.7	963	11	-224	4729	-57	2710	5prime_fragment	FALSE	canonical	3	122	junction_5	15.8795465930234	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGTGCAAGTCCT	NA	False	NA	NA	False	NA	NA	NA	11806038	11823489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694
transcript_16181.known	chr10	-	585	2	FSM	ENSG00000237036.6	ENST00000441257.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATCAAGAAAGTCGTC	18	True	NA	NA	False	NA	NA	NA	31319027	31318087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31318541_31318895
transcript_16184.known	chr10	-	2503	1	FSM	ENSG00000237036.6	ENST00000607166.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTGACGGTTGCTT	15	True	NA	1	True	AATAAA	-19	NA	31319030	31316527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31316500_31319000
transcript_16185.known	chr10	-	347	2	FSM	ENSG00000237797.2	ENST00000433770.2	406	2	59	0	59	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCTTTGCACGGAAGTA	205	False	NA	NA	False	AATAAA	-22	NA	31707388	31693083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31693348_31707305
transcript_16186.known	chr10	-	5060	20	FSM	ENSG00000165322.18	ENST00000344936.7	5060	20	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_16	35.0570567777288	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTGCAGATTTAGAAAA	-10	True	NA	30	True	AAAAAG	-1	NA	31928831	31805397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_16188.known	chr10	-	4958	19	FSM	ENSG00000165322.18	ENST00000375245.8	4958	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_11	33.7889692717082	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	NA	False	NA	24	True	NA	NA	NA	31928876	31805403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_16189.known	chr10	-	4914	18	FSM	ENSG00000165322.18	ENST00000375250.9	4914	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_11	33.7880632471451	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGTAAGTCTTCCTT	7	True	NA	-9	True	AATAAA	-18	NA	31928814	31805436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_1619.nnic	chr1	+	1155	6	NNC	ENSG00000011021.23	novel	963	11	NA	NA	1	2710	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	63.5534420783013	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGTGCAAGTCCT	-5	True	NA	NA	False	NA	NA	NA	11806191	11823489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822751
transcript_16193.known	chr10	-	5084	19	FSM	ENSG00000165322.18	ENST00000396144.8	5084	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	39.8388730070158	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	NA	False	NA	24	True	NA	NA	NA	31928876	31805403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_16198.known	chr10	-	5866	26	FSM	ENSG00000170759.11	ENST00000302418.5	5866	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	122.523467139973	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATGACTTTCTTAAAAC	-13	True	NA	-19	True	AATAAA	-19	NA	32056425	32009014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32011517_32015508_32015660_32017142_32017360_32018051_32018157_32018315_32018388_32018501_32018563_32019857_32019960_32021021_32021132_32021225_32021288_32022139_32022258_32022847_32023037_32028427_32028572_32031072_32031280_32032705_32032775_32033844_32034039_32034689_32034839_32035521_32035668_32035889_32035995_32037253_32037379_32037519_32037608_32038162_32038219_32038777_32038827_32039326_32039432_32040383_32040458_32048463_32048552_32055847
transcript_16200.known	chr10	-	3997	14	FSM	ENSG00000120616.16	ENST00000319778.11	3997	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.3405341475895	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-18	True	NA	-28	True	AATAAA	-29	NA	32347158	32267750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_16201.known	chr10	-	3909	14	FSM	ENSG00000120616.16	ENST00000375110.6	3909	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	5.51705263908957	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-29	True	NA	-28	True	AATAAA	-29	NA	32378798	32267750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32378490
transcript_16206.nic	chr10	-	1089	5	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-415	10682	-16	-10682	5prime_fragment	FALSE	canonical	3	10	junction_4	3	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGAGCTATTGCACT	126	False	NA	NA	False	GATAAA	-16	NA	32347234	32292540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_16208.nic	chr10	-	870	4	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-415	11244	-16	-11244	5prime_fragment	FALSE	canonical	3	10	junction_3	0.942809041582063	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCGAGGGCCATCTCTTA	126	False	NA	NA	False	ATTAAA	-12	NA	32347234	32293102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32293195_32293591_32293738_32305771_32305932_32346762
transcript_16210.nic	chr10	-	713	3	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-415	11798	-16	-11798	5prime_fragment	FALSE	canonical	3	10	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACATCTGCCCATTGCAA	126	False	NA	NA	False	AATAAA	-14	NA	32347234	32293656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32293738_32305771_32305932_32346762
transcript_16211.nic	chr10	-	740	2	ISM	ENSG00000120616.16	ENST00000479380.2	2399	13	-118	33790	-4	-23645	5prime_fragment	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCAGATATAGAAATAGT	-33	True	NA	NA	False	AAGAAA	-11	NA	32378802	32305503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32305932_32378490
transcript_16212.known	chr10	-	907	2	FSM	ENSG00000120616.16	ENST00000480402.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-18	True	NA	-1	True	ATTAAA	-16	NA	32347218	32345111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32345563_32346762
transcript_16213.known	chr10	-	871	2	FSM	ENSG00000120616.16	ENST00000469059.2	871	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	19	True	NA	-1	True	ATTAAA	-16	NA	32347121	32345111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32345624_32346762
transcript_16216.nnic	chr10	-	870	2	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-387	23647	12	-23647	5prime_fragment	FALSE	canonical	3	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTCAGATATAGAAATA	-6	True	NA	NA	False	AAGAAA	-9	NA	32347206	32305505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32305932_32346762
transcript_16222.known	chr10	-	3982	17	FSM	ENSG00000150093.20	ENST00000417122.7	3982	17	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_15	537.642041551579	750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	183	False	32958300	-17	True	ATTAAA	-3	NA	32958275	32900332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32953592_32953810_32958144
transcript_16227.known	chr10	-	2213	12	FSM	ENSG00000099250.18	ENST00000374822.8	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	17.3519713315493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTACCTCTCTTCTC	1589	False	NA	-4	True	AATAAA	-18	NA	33334642	33197620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_33197710_33202890_33202996_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
transcript_16228.known	chr10	-	1988	11	FSM	ENSG00000099250.18	ENST00000374821.9	1988	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	35.5099985919459	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTACCTCTCTTCTC	1709	False	NA	-4	True	AATAAA	-18	NA	33334522	33197620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_33197710_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
transcript_1623.nnic	chr1	+	555	5	NNC	ENSG00000011021.23	novel	814	6	NA	NA	47	-2651	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	65.8786763680024	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGTATTTATTTTGC	NA	False	NA	NA	False	AATAAA	-22	NA	11806142	11818128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11817972
transcript_16232.known	chr10	+	302	2	FSM	ENSG00000226386.1	ENST00000446211.1	302	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACAAATGTCTGCAAAGA	NA	False	NA	6	True	AATAAA	-23	NA	34815766	34816386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_34815802_34816119
transcript_16233.known	chr10	+	587	3	FSM	ENSG00000213724.4	ENST00000451920.2	587	3	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCTGATGGATCATGAG	NA	False	NA	NA	False	NA	NA	NA	34965068	34966259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_34965205_34965509_34965748_34966046
transcript_16235.known	chr10	-	4183	21	FSM	ENSG00000108094.17	ENST00000374749.8	4183	21	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_20	65.8019756542309	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	-6	True	NA	-14	True	GATAAA	-16	NA	35090341	35008550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090178
transcript_16236.known	chr10	-	4233	21	FSM	ENSG00000108094.17	ENST00000374751.7	4233	21	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_20	55.8344875502588	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	NA	False	NA	-14	True	GATAAA	-16	NA	35090642	35008550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_1624.nic	chr1	+	716	5	ISM	ENSG00000011021.23	ENST00000376497.7	814	6	-20	925	2	-925	5prime_fragment	FALSE	canonical	3	146	junction_4	7.48331477354788	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAATTTGTGTAG	-4	True	NA	25	True	AATAGA	-22	NA	11806192	11819854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487
transcript_16243.nic	chr10	-	1106	9	ISM	ENSG00000108094.17	ENST00000687524.1	2738	21	-47	28903	4	-2	5prime_fragment	FALSE	canonical	3	229	junction_8	73.0187261940387	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTAAGTGACACCAAACAT	NA	False	NA	NA	False	AATATA	-21	NA	35090638	35038921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_1627.nic	chr1	+	1934	5	ISM	ENSG00000011021.23	ENST00000376497.7	814	6	5	-318	5	318	intron_retention	FALSE	canonical	3	146	junction_4	7.48331477354788	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAATCAATAAAT	-18	True	NA	NA	False	AAAACA	-16	NA	11806217	11821097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487
transcript_16273.known	chr10	+	747	5	FSM	ENSG00000095794.20	ENST00000461968.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	62.5994209238392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAACCTTGAAAGACAT	95	False	NA	NA	False	NA	NA	NA	35126947	35211758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211655
transcript_16280.nic	chr10	+	1146	5	ISM	ENSG00000095794.20	ENST00000354759.7	1589	8	-80	32307	-9	0	5prime_fragment	FALSE	canonical	2	5	junction_2	82.3468275041607	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGGA	-5	True	NA	10	True	AATAAA	-19	NA	35127081	35179847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_35127194_35137781_35137880_35148367_35148492_35178888_35178987_35179133
transcript_16281.known	chr10	+	1207	4	FSM	ENSG00000095794.20	ENST00000374726.7	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	48.3206880009887	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGGA	70	False	NA	10	True	AATAAA	-19	NA	35126922	35179847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133
transcript_16283.known	chr10	+	1074	4	FSM	ENSG00000095794.20	ENST00000490460.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	40.3016404408335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATGAACTGAAGGCAGC	-25	True	NA	-52	True	AAAACA	-18	NA	35126958	35211811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35148367_35148492_35206894_35207052_35211253
transcript_16289.known	chr10	+	563	4	FSM	ENSG00000095794.20	ENST00000496019.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.0941054371347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAAAGTAAAAATTTTG	69	False	NA	NA	False	AAAAAG	-33	NA	35127155	35179462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35137781_35137880_35178888_35178987_35179133
transcript_16292.known	chr10	+	415	3	FSM	ENSG00000095794.20	ENST00000482633.5	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	62.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTAGCTTTAAGTCTTC	12	False	NA	NA	False	AATACA	-29	NA	35127047	35179304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35178888_35178987_35179133
transcript_16294.known	chr10	+	1416	3	FSM	ENSG00000095794.20	ENST00000460270.5	1416	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	39	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTGTAATATAAAAGA	30	True	NA	-17	True	TTTAAA	-30	NA	35127116	35212435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35206894_35207052_35211253
transcript_16297.known	chr10	+	1030	3	FSM	ENSG00000095794.20	ENST00000474362.5	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	15	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAGGAAAGGATGAT	NA	False	NA	18	True	AATAAA	-21	NA	35126790	35212125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35206894_35207052_35211655
transcript_16299.known	chr10	+	1895	3	FSM	ENSG00000095794.20	ENST00000356917.9	1895	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCAGGGAACAAGCCC	10	True	NA	-10	True	AATAAA	-1	NA	35195146	35212923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35195215_35206894_35207052_35211253
transcript_163.known	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	1156.46264098759	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_16300.known	chr10	+	1625	3	FSM	ENSG00000095794.20	ENST00000344351.5	1625	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGATGACATATTTTT	-9	True	NA	43	True	TATAAA	-44	NA	35195916	35212495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35196143_35206894_35207052_35211253
transcript_16301.known	chr10	+	1049	3	FSM	ENSG00000095794.20	ENST00000488328.5	1049	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTAGTGTTGGTTTAAT	-4	True	NA	13	True	TATAAA	-14	NA	35195132	35212465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35195215_35206894_35207052_35211655
transcript_16302.known	chr10	+	5068	10	FSM	ENSG00000108100.18	ENST00000374704.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_5	58.4465567848098	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGCCTGCCTTCCTGCT	-9	True	NA	NA	False	AATAAA	-29	NA	35336508	35572667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35337208_35483403_35483479_35501500_35501536_35516522_35516624_35525963_35526000_35529972_35530031_35530123_35530244_35553018_35553186_35566022_35566186_35569053
transcript_16310.nnic	chr10	-	1563	8	NNC	ENSG00000198105.16	novel	1286	7	NA	NA	5	-204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.9806292407144	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTTCTGTTTGTT	-16	True	NA	-6	True	AATAAA	-20	NA	37857631	37828968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_37829549_37831231_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_16312.nic	chr10	-	1749	8	NIC	ENSG00000198105.16	novel	1286	7	NA	NA	-46	-204	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	48.7291556693208	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTTCTGTTTGTT	406	False	NA	-6	True	AATAAA	-20	NA	37857682	37828968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_37829684_37831231_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_16314.nic	chr10	-	1354	8	NIC	ENSG00000198105.16	novel	1286	7	NA	NA	-1	-204	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	56.4041538490613	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTTCTGTTTGTT	-19	True	NA	-6	True	AATAAA	-20	NA	37858107	37828968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_37829684_37831231_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37858004
transcript_16317.known	chr10	-	1286	7	FSM	ENSG00000198105.16	ENST00000374648.7	1286	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	36.6943077632243	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCCTAATTATTTTGC	8	True	NA	-9	True	AATAAA	-14	NA	37857558	37830855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_1632.known	chr1	+	783	4	FSM	ENSG00000215910.8	ENST00000482358.1	783	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTTTCAGTCTCTC	23	False	NA	4	True	AATAAA	-19	NA	11787811	11789585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11788048_11788242_11788379_11788651_11788747_11789269
transcript_16321.known	chr10	-	4795	6	FSM	ENSG00000198105.16	ENST00000357328.8	4795	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	52.8075752141679	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTTGATTAATTCACC	4	True	NA	-12	True	AATAAA	-17	NA	37858084	37828764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37858004
transcript_1633.nic	chr1	+	479	4	ISM	ENSG00000011021.23	ENST00000376497.7	814	6	-6	3955	-6	-3955	5prime_fragment	FALSE	canonical	3	158	junction_3	3.2659863237109	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGCCTTTTCTTTTTTCC	10	True	NA	NA	False	NA	NA	NA	11806206	11816824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614
transcript_16331.known	chr10	-	3161	7	FSM	ENSG00000175395.16	ENST00000374633.5	3161	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.67045259092421	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGCTACCCAACATTCA	-1	True	NA	NA	False	NA	NA	NA	37976627	37950566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_37953196_37953694_37953759_37957019_37957116_37957419_37957547_37967916_37967940_37971707_37971808_37976505
transcript_16332.known	chr10	-	4152	6	FSM	ENSG00000175395.16	ENST00000302609.8	4152	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.38230690505755	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCAGCTTCTTTTTGTAT	-21	True	NA	NA	False	AATAAA	-13	NA	37976647	37949572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_37953196_37953694_37953759_37957019_37957116_37957419_37957547_37971707_37971808_37976505
transcript_16339.known	chr10	+	2854	4	FSM	ENSG00000189180.16	ENST00000628825.2	2854	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	104.960309958892	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGGGCACCTAACAAT	-34	True	NA	30	True	AATAAA	-39	NA	38010654	38056861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38010784_38016870_38017016_38017290_38017387_38054377
transcript_16341.known	chr10	+	539	5	FSM	ENSG00000189180.16	ENST00000478556.1	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	91.9140223252143	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCAGTGTGATTCATG	10	True	NA	66	True	NA	NA	NA	38010698	38054538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38010784_38012297_38012351_38016874_38017016_38017290_38017387_38054374
transcript_16342.nnic	chr10	+	1958	2	ISM	ENSG00000099251.14	ENST00000471365.1	1033	9	-105	17978	-30	-17978	5prime_fragment	FALSE	canonical	3	45	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACCTGAGGAGAT	NA	False	NA	NA	False	AAGAAA	-7	NA	38356349	38360129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_38356490_38358311
transcript_16346.known	chr10	+	7027	8	FSM	ENSG00000075407.19	ENST00000351773.7	7027	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	21.6710095072017	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATAGCAGTTTCTAT	-26	True	NA	23	True	AATAAA	-31	NA	38094335	38123348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38094491_38094930_38095225_38095357_38095634_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38117389
transcript_16350.nnic	chr10	+	1199	8	NNC	ENSG00000075407.19	novel	4448	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	20.0834991666171	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTTTTGAGTTGCTC	-26	True	NA	15	True	ATTAAA	-15	NA	38094335	38115693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_38094491_38094930_38095225_38095537_38095630_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38115378
transcript_16353.nnic	chr10	+	1203	8	NNC	ENSG00000075407.19	novel	7027	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_7	22.0444819325261	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTTTTGAGTTGCTC	-26	True	NA	15	True	ATTAAA	-15	NA	38094335	38115693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_38094491_38094930_38095225_38095537_38095634_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38115378
transcript_16358.nnic	chr10	+	926	7	NNC	ENSG00000075407.19	novel	4448	8	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	20.0617103513689	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTTTTGAGTTGCTC	NA	False	NA	15	True	ATTAAA	-15	NA	38094314	38115693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_38094491_38095537_38095630_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38115378
transcript_16362.known	chr10	+	8738	7	FSM	ENSG00000075407.19	ENST00000361085.9	8738	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	19.6871362400257	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAATCTCAATGGGTCA	-15	True	NA	NA	False	AATGAA	-20	NA	38094346	38125544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38094491_38095537_38095634_38095743_38095805_38096573_38096633_38114754_38114882_38115194_38115291_38117389
transcript_16364.known	chr10	+	1148	7	FSM	ENSG00000075407.19	ENST00000479469.5	1148	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	23.2193645237954	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGAGGCTCCAGACCT	-11	True	NA	NA	False	NA	NA	NA	38094350	38115385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38094491_38094930_38095225_38095357_38095634_38095743_38095805_38096573_38096633_38114754_38114882_38115194
transcript_16367.nic	chr10	+	1014	6	NIC	ENSG00000075407.19	novel	4448	8	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	15.4841854806767	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTTTTGAGTTGCTC	NA	False	NA	15	True	ATTAAA	-15	NA	38094314	38115693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_38094491_38095537_38095630_38095743_38095805_38096573_38096633_38114754_38114882_38115194
transcript_16378.known	chr10	+	1401	8	FSM	ENSG00000099251.14	ENST00000494540.5	1401	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	32.891286607457	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTTCCTTCCTTTTG	NA	False	NA	NA	False	AATAAA	-14	NA	38356379	38378505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38356490_38358311_38358516_38362239_38362339_38363495_38363611_38365433_38365630_38369952_38370010_38371074_38371174_38377984
transcript_1638.nnic	chr1	+	809	3	NIC	ENSG00000215910.8	novel	4672	21	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTTTCAGTCTCTC	2495	False	NA	4	True	AATAAA	-19	NA	11787784	11789585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_11788048_11788148_11788379_11789269
transcript_16398.nic	chr10	-	3085	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	-35	-3009	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	22.0236236800396	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTTGTAATGAGTACAGA	10	True	NA	NA	False	ATTAAA	-13	NA	42638605	42592117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_16399.nic	chr10	-	2982	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	-52	-3129	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	22.0236236800396	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGAGTTTGATGCCAT	-7	True	NA	-7	True	AATAAA	-14	NA	42638622	42592237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_164.known	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_6	1152.73999236601	1834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAACGTGGCATGCG	NA	False	NA	NA	False	NA	NA	NA	5907	1000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_1640.known	chr1	-	855	3	FSM	ENSG00000175206.11	ENST00000376480.7	855	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCGTTGGTGTGCTTT	-2	True	NA	NA	False	AATAAA	-27	NA	11847783	11845708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11846015_11847112_11847440_11847561
transcript_16401.nic	chr10	-	1276	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	-63	-4846	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	22.0236236800396	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGGGAAAGCTTTCT	NA	False	NA	NA	False	GATAAA	-24	NA	42638633	42593954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_1641.nnic	chr1	+	475	2	NIC	ENSG00000215910.8	novel	1617	9	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGCCTTCCCAGGGAAGG	2492	False	NA	NA	False	AATAAA	-14	NA	11787781	11789478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_11788048_11789269
transcript_16415.known	chr10	-	5982	5	FSM	ENSG00000196693.15	ENST00000359467.8	5982	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	31.6267292017369	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGGAACATCTTGTTT	-5	True	NA	-11	True	AATAAA	-20	NA	42638570	42589108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_1642.nnic	chr1	+	646	2	NIC	ENSG00000215910.8	novel	783	4	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTTTCAGTCTCTC	2428	False	NA	4	True	AATAAA	-19	NA	11787717	11789585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_11788048_11789269
transcript_16428.known	chr10	-	463	4	FSM	ENSG00000196693.15	ENST00000476796.2	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	3.68178700572909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGATGGAGAATACTG	3	True	NA	NA	False	NA	NA	NA	42638521	42631807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42632025_42632294_42632440_42636919_42636973_42638473
transcript_16429.nic	chr10	-	1042	3	ISM	ENSG00000196693.15	ENST00000486187.5	1941	6	-78	49600	-61	614	5prime_fragment	FALSE	canonical	3	20	junction_1	41	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATTATGTCTCTAAGTA	-16	False	NA	NA	False	AATAAA	-14	NA	42638631	42631193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_42632025_42636919_42636973_42638473
transcript_1643.known	chr1	+	5589	23	FSM	ENSG00000011021.23	ENST00000346436.11	5589	23	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_17	23.9493698048526	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCCTTTAGCCTTT	-6	True	NA	6	True	AATAAA	-15	NA	11806190	11843130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826215_11827088_11827222_11828105_11828220_11828457_11828625_11829195_11829323_11833514_11833639_11833876_11834031_11834235_11834396_11834483_11834591_11835966_11836154_11836998_11837157_11837342_11837500_11838334_11838443_11838534_11838661_11840142
transcript_16430.known	chr10	+	790	2	FSM	ENSG00000285884.2	ENST00000649715.2	822	2	32	0	32	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTCTCTCCCGTCTCTG	7	True	NA	NA	False	AATAAA	-18	NA	42638313	42645542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_42638554_42644992
transcript_16431.known	chr10	+	7759	23	FSM	ENSG00000165733.8	ENST00000374518.6	7759	23	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	57.6365249495878	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGAGTCAGTGGCATT	3	True	NA	11	True	AATAAA	-22	NA	42782794	42834937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
transcript_16437.nic	chr10	+	2452	11	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-294	37414	-294	-37414	5prime_fragment	FALSE	canonical	3	424	junction_1	43.8538481777825	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAATTCTGGTTCAGA	23	False	NA	NA	False	NA	NA	NA	42782500	42797523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421
transcript_16440.nic	chr10	+	2301	10	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-294	37755	-294	-37755	5prime_fragment	FALSE	canonical	3	424	junction_1	46.219551204877	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	23	False	NA	23	True	NA	NA	NA	42782500	42797182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_16442.nnic	chr10	+	2178	10	NNC	ENSG00000165733.8	novel	7759	23	NA	NA	-3	-37755	at_least_one_novel_splicesite	FALSE	canonical	3	167	junction_1	113.87853611482	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	0	True	NA	23	True	NA	NA	NA	42782791	42797182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_42782999_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_16448.nic	chr10	-	3228	12	NIC	ENSG00000198915.12	novel	3264	13	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.1137856037199	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	NA	False	NA	-7	True	AATAAA	-18	NA	43203882	43194534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_16449.nnic	chr10	-	3112	12	NNC	ENSG00000198915.12	novel	3264	13	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	12.1137856037199	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGCCTGCTGTGTGTG	-36	True	NA	-7	True	AATAAA	-18	NA	43203876	43194534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
transcript_1645.known	chr1	-	708	3	FSM	ENSG00000120937.9	ENST00000376468.4	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	8	2399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAAACTGATTTGTC	-1	True	NA	-13	True	AATAAA	-20	NA	11858945	11857463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11857672_11858213_11858470_11858701
transcript_16450.nic	chr10	-	1670	12	NIC	ENSG00000198915.12	novel	4104	13	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	12.1137856037199	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	NA	False	NA	-16	True	NA	NA	NA	43203882	43196092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_16451.nnic	chr10	-	1554	12	NNC	ENSG00000198915.12	novel	4104	13	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_11	12.1137856037199	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	-36	True	NA	-16	True	NA	NA	NA	43203876	43196092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
transcript_16455.known	chr10	+	490	8	FSM	ENSG00000150201.15	ENST00000480834.5	490	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.03015750727543	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCGGTAGTCTTGTGAT	13	False	NA	NA	False	ATTAAA	-17	NA	43371652	43376332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43371698_43372726_43372773_43374469_43374503_43374612_43374640_43375498_43375574_43375694_43375735_43376031_43376070_43376146
transcript_16457.known	chr10	-	2670	4	FSM	ENSG00000169813.17	ENST00000356053.7	2670	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	1043.55961337466	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	294	False	NA	-1	True	TATAAA	-19	NA	43408882	43385616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43408726
transcript_16458.known	chr10	-	2186	4	FSM	ENSG00000169813.17	ENST00000337970.7	2186	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	1013.87803342743	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGCACAGATTACTCA	10	True	NA	-44	True	AATAAA	-14	NA	43409166	43386021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409089
transcript_1646.known	chr1	+	120	1	FSM	ENSG00000199347.1	ENST00000362477.1	120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTAAGTGTTTTAAAAA	2	True	NA	NA	False	NA	NA	NA	11908151	11908271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11908200_11908300
transcript_16466.known	chr10	-	2569	4	FSM	ENSG00000169813.17	ENST00000682386.1	2569	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	712.90158273542	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTCACGCTCCTG	-10	True	NA	-2	True	TATAAA	-18	NA	43409186	43385617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409130
transcript_16467.known	chr10	-	2617	4	FSM	ENSG00000169813.17	ENST00000357065.8	2617	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	951.691476617641	2142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	1357	False	NA	-1	True	TATAAA	-19	NA	43407819	43385616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43407716
transcript_16468.known	chr10	-	715	3	FSM	ENSG00000169813.17	ENST00000498176.1	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	2223	junction_2	42.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGAGGTGTTCAAGT	450	False	NA	NA	False	AAAAAG	-23	NA	43396817	43387642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455
transcript_16469.known	chr10	+	760	2	FSM	ENSG00000230555.2	ENST00000442526.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGGT	118	False	NA	NA	False	NA	NA	NA	43420737	43422100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43421067_43421669
transcript_1647.known	chr1	-	2819	3	FSM	ENSG00000116685.16	ENST00000376572.8	2819	3	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_2	51.5	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACCGGTTTGTGTGTGGTT	-12	True	NA	-7	True	AATAAA	-18	NA	11926427	11919590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11920333_11922635_11923490_11925204
transcript_16470.known	chr10	+	2284	4	FSM	ENSG00000243660.12	ENST00000652684.1	2284	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.55777733351102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGATATTTCATTGAAC	NA	False	NA	7	True	AATAAA	-21	NA	43436847	43483181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43437156_43475720_43475848_43476106_43476203_43481428
transcript_16474.known	chr10	+	2111	4	FSM	ENSG00000243660.12	ENST00000437590.4	2128	4	15	2	0	-2	multi-exon	FALSE	canonical	1	2	junction_1	5.09901951359278	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGTGATATTTCATTGA	11	False	NA	5	True	AATAAA	-19	NA	43437125	43483179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43437263_43475720_43475848_43476106_43476203_43481428
transcript_16476.known	chr10	+	567	3	FSM	ENSG00000243660.12	ENST00000456416.6	567	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCCAGAGGGAAACCT	11	False	NA	NA	False	NA	NA	NA	43437125	43481731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43437263_43475720_43475848_43481428
transcript_16477.nnic	chr10	+	728	2	NIC	ENSG00000243660.12	novel	568	4	NA	NA	-37	-4	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTTGATGTACTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	43436803	43454660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_43436936_43454064
transcript_16479.known	chr10	-	2069	4	FSM	ENSG00000196793.14	ENST00000374446.7	2069	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.86744175568088	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTTGTGTTTTTC	-22	True	NA	-1	True	NA	NA	NA	43574616	43556343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43558172_43567898_43568022_43573636_43573678_43574539
transcript_1648.known	chr1	+	2976	19	FSM	ENSG00000083444.17	ENST00000196061.5	2976	19	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_7	18.818578290851	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGGAAGATGCTCAGG	-1	True	NA	37	True	ATTAAA	-15	NA	11934716	11975537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11934856_11947975_11948068_11949772_11949907_11950356_11950521_11952622_11952736_11954829_11954894_11956916_11957015_11957841_11957944_11958515_11958648_11960645_11960768_11963531_11963637_11964174_11964301_11964643_11964786_11965479_11965594_11966250_11966317_11966986_11967092_11970669_11970817_11972871_11972998_11974652
transcript_16481.nnic	chr10	-	1969	2	NNC	ENSG00000196793.14	novel	2069	4	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTTGTGTTTTTC	-17	True	NA	-1	True	NA	NA	NA	43574611	43556343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_43558172_43574470
transcript_16482.known	chr10	-	701	2	FSM	ENSG00000196793.14	ENST00000491188.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAATACTTAACACCA	-3	True	NA	NA	False	NA	NA	NA	43574597	43557528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43558172_43574539
transcript_16483.known	chr10	-	2027	3	FSM	ENSG00000196793.14	ENST00000426961.1	2027	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTGCCTTGTGTTT	-24	True	NA	-4	True	NA	NA	NA	43574618	43556346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43558172_43567898_43568022_43574539
transcript_16486.known	chr10	+	2024	5	FSM	ENSG00000198298.13	ENST00000361807.8	2024	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5724115023974	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATCTCTCTCTCTCTCTC	12	True	NA	2	True	AATAAA	-18	NA	43606437	43617904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43606547_43606996_43607075_43608613_43608741_43609254_43609351_43616290
transcript_16491.nnic	chr10	+	453	3	NNC	ENSG00000198298.13	novel	2024	5	NA	NA	-12	305	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCACCTACATTTCTACTG	-19	True	NA	NA	False	AATAAA	-16	NA	43606406	43607705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_43606547_43606996_43607075_43607470
transcript_16495.known	chr10	+	532	2	FSM	ENSG00000198298.13	ENST00000480678.1	532	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGGAGGGGTGGAGTAG	-7	True	NA	NA	False	NA	NA	NA	43606418	43607400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43606547_43606996
transcript_16502.nic	chr10	-	1271	3	NIC	ENSG00000169740.14	novel	1159	3	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	26	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTATGTTTTATAATTT	-20	True	NA	-6	True	AATAAA	-21	NA	43648887	43643861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_43644802_43645957_43646203_43648801
transcript_16503.known	chr10	-	1201	3	FSM	ENSG00000169740.14	ENST00000395797.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	47.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTTTATAATTTCT	163	False	NA	-4	True	AATAAA	-23	NA	43648704	43643859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43644802_43646063_43646203_43648584
transcript_16504.known	chr10	-	1159	3	FSM	ENSG00000169740.14	ENST00000374433.7	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	35	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTATGTTTTATAATTT	-14	True	NA	-6	True	AATAAA	-21	NA	43648881	43643861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43644802_43646063_43646203_43648801
transcript_16505.known	chr10	-	1052	4	FSM	ENSG00000107562.17	ENST00000395794.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	62.2253967444162	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGCAATAAAATGCTAATT	47	False	NA	-101	True	ACTAAA	-28	NA	44385049	44377163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_44377906_44378636_44378724_44380762_44380881_44384944
transcript_16506.known	chr10	-	1857	3	FSM	ENSG00000107562.17	ENST00000343575.11	1928	3	5	66	0	31	multi-exon	FALSE	canonical	3	142	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTCCTACTGTATGTG	4	True	NA	-70	True	AATAAA	-21	NA	44385092	44377132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_44378724_44380762_44380881_44384944
transcript_16507.known	chr10	-	2129	3	FSM	ENSG00000224812.4	ENST00000663109.1	2129	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACACATATTAAAGCATA	5	True	NA	NA	False	AATAGA	-6	NA	44959638	44793605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_44795542_44923080_44923227_44959591
transcript_16509.known	chr10	+	3631	11	FSM	ENSG00000107551.21	ENST00000340258.10	3631	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	14.5082735016955	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTATGGGAGAGTGTT	14	True	NA	NA	False	AATAAA	-22	NA	44959801	44995891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_1651.known	chr1	+	4766	20	FSM	ENSG00000116688.18	ENST00000675817.1	4766	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	95.7180474014067	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATCCTTTGTGAGATCT	9542	False	NA	6	True	AATAAA	-9	NA	11980208	12013500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003757_12003890_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_16513.nic	chr10	+	1252	9	ISM	ENSG00000107551.21	ENST00000340258.10	3631	11	-68	4548	-68	0	5prime_fragment	FALSE	canonical	3	70	junction_4	12.4799839743487	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAATGTATTTTGTTGTC	9237	False	NA	4	True	AGTAAA	-14	NA	44959733	44991343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947
transcript_16516.known	chr10	+	4350	10	FSM	ENSG00000107551.21	ENST00000489171.5	4350	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	13.9079868696168	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	8910	False	NA	9	True	AATAAA	-15	NA	44959406	44994707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_44959867_44970164_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_16518.known	chr10	-	3078	2	FSM	ENSG00000165511.6	ENST00000625168.1	3078	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTGAACCGCTCTTG	169	False	NA	0	True	AATAAA	-21	NA	45000888	44997697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_45000417_45000529
transcript_1652.known	chr1	+	4407	19	FSM	ENSG00000116688.18	ENST00000235329.10	4407	19	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	34.4484316688648	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGATCTGTCTTTTT	2	True	NA	14	True	AATAAA	-17	NA	11980443	12013508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_16522.known	chr10	+	2103	2	FSM	ENSG00000165512.5	ENST00000298299.4	2103	2	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	0	2576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTTCTGTTTATTTTTC	-7	True	NA	20	True	AATAAA	-23	NA	45000922	45005326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_45000979_45003279
transcript_16524.known	chr10	-	396	1	FSM	ENSG00000228462.1	ENST00000455650.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAACAAACCATGCTGG	NA	False	NA	-57	True	NA	NA	NA	45073541	45073145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_45073100_45073500
transcript_16525.known	chr10	+	2519	14	FSM	ENSG00000012779.12	ENST00000374391.7	2519	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	3.54347470962493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTTGTTCCATGTGTT	-3	True	NA	NA	False	AATAAA	-16	NA	45374215	45446117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_45374430_45382482_45382682_45395854_45395937_45412190_45412314_45424040_45424148_45424959_45425133_45428617_45428765_45440429_45440634_45441343_45441431_45443037_45443217_45443415_45443538_45443727_45443829_45444115_45444287_45445507
transcript_16527.nic	chr10	+	973	3	ISM	ENSG00000012779.12	ENST00000542434.5	2390	13	18	49727	18	-32094	5prime_fragment	FALSE	canonical	2	9	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGACTCATAAAATGAGGG	10	True	NA	NA	False	AATAAA	-11	NA	45374193	45396392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_45374430_45382482_45382682_45395854
transcript_1653.nic	chr1	+	4412	19	NIC	ENSG00000116688.18	novel	4407	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	59.4476894233727	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGATCTGTCTTTTT	-7	True	NA	14	True	AATAAA	-17	NA	11980434	12013508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_11980485_11981973_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_16559.known	chr10	+	1190	7	FSM	ENSG00000265354.4	ENST00000580018.4	1190	7	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_3	133.529855171876	12904	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGTTGTCTCAATTT	-13	True	NA	50	True	AATAAA	-41	NA	45972488	46003742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_45972731_45975453_45975513_45982522_45982617_45982845_45982931_45985382_45985442_45988736_45988848_46003202
transcript_1656.nic	chr1	+	1425	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	173.844578575232	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCCCACGTGTGCT	NA	False	NA	25	True	AATAAA	-16	NA	12019411	12032039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_16561.known	chr10	-	3489	10	FSM	ENSG00000266412.6	ENST00000585132.5	3489	10	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_9	161.469715847283	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	8	True	NA	-1	True	ATTAAA	-16	NA	46023455	46005087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
transcript_16562.known	chr10	-	3461	10	FSM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_9	42.8407905311437	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-14	True	NA	-1	True	ATTAAA	-16	NA	46030623	46005087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_16563.nic	chr10	-	3309	9	NIC	ENSG00000266412.6	novel	3461	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_8	191.823120022066	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-17	True	NA	-1	True	ATTAAA	-16	NA	46030626	46005087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46030525
transcript_16571.nic	chr10	-	902	5	NIC	ENSG00000263639.7	novel	920	5	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	2.04633819296811	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAATATGTGTGTCCT	NA	False	NA	-6	True	AGTAAA	-17	NA	46048179	46033312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_46033552_46038965_46039072_46039985_46040092_46046234_46046380_46047873
transcript_16574.known	chr10	-	920	5	FSM	ENSG00000263639.7	ENST00000663171.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.34520787991171	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAATATGTGTGTCCT	NA	False	NA	-6	True	AGTAAA	-17	NA	46048180	46033312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_46033569_46038965_46039072_46039985_46040092_46046234_46046380_46047873
transcript_16576.nnic	chr10	+	746	2	NNC	ENSG00000285294.1	novel	2872	4	NA	NA	-35	-26269	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAAGTTTGTGGCAATT	-1	True	NA	NA	False	AATAAA	-17	NA	46398326	46427037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_46398794_46426758
transcript_16591.known	chr10	-	486	6	FSM	ENSG00000265366.6	ENST00000631118.2	486	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.08455317256309	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAGATTAATTTGGTAA	NA	False	NA	-7	True	AATAAA	-11	NA	46786770	46759022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_46759161_46768208_46768293_46770738_46770803_46772428_46772485_46776752_46776834_46786707
transcript_16598.nic	chr10	+	1647	4	ISM	ENSG00000204177.11	ENST00000690404.1	2391	6	-415	5734	-249	-5734	5prime_fragment	TRUE	canonical	0	0	junction_1	62.9620697104393	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGCCAGGCAC	NA	False	NA	NA	False	NA	NA	NA	46786424	46791738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961
transcript_16601.known	chr10	+	4294	9	FSM	ENSG00000204177.11	ENST00000580094.5	4294	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.8513322698543	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTCCTTTACCAGAAATA	NA	False	NA	NA	False	AATAAA	-26	NA	46786673	46811989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961_46791042_46794726_46794916_46795805_46795954_46796671_46796794_46798028_46798169_46808995
transcript_16602.known	chr10	-	3516	2	FSM	ENSG00000265763.4	ENST00000585316.3	3516	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGAGAAGCTGGG	8	True	NA	-12	True	AATAAA	-15	NA	47384293	47365495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_47368938_47384219
transcript_16605.nic	chr10	-	1354	4	ISM	ENSG00000254929.6	ENST00000605970.5	1594	12	-23	30792	8	-25250	5prime_fragment	FALSE	canonical	3	31	junction_3	58.7896438347965	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGCCAGACACAGT	1	True	NA	NA	False	AAAAAG	-9	NA	47553506	47548607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553328
transcript_16613.known	chr10	+	5844	12	FSM	ENSG00000107643.17	ENST00000395611.7	5844	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	27.6749133051267	565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	0	True	NA	19	True	AATAAA	-28	NA	48306638	48439357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
transcript_16618.known	chr10	-	1951	2	FSM	ENSG00000128805.15	ENST00000477708.6	1951	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGTTACCTGGCT	8322	False	NA	-12	True	ATTAAA	-16	NA	48451627	48446035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_48446620_48450260
transcript_16620.known	chr10	-	3495	6	FSM	ENSG00000225830.16	ENST00000447839.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	8.25590697622012	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCCTTGAATTTTT	-1	True	NA	NA	False	AATAAA	-19	NA	49539121	49515197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_49517122_49524032_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
transcript_16626.known	chr10	-	4294	18	FSM	ENSG00000227345.9	ENST00000616448.2	4294	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	96.3255724974164	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	NA	False	NA	-16	True	AATAAA	-21	NA	49942027	49818278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49935075_49935143_49941508
transcript_16632.known	chr10	-	3473	17	FSM	ENSG00000227345.9	ENST00000614063.4	3473	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	109.754769258561	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTCTGCAGCCCGCAGA	NA	False	NA	NA	False	NA	NA	NA	49941986	49818991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49941508
transcript_1665.known	chr1	+	1541	10	FSM	ENSG00000116691.11	ENST00000235332.6	1541	10	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	94.818475045091	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	-2	True	NA	31	True	AATAAA	-22	NA	12019497	12032045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_16650.known	chr10	+	2623	8	FSM	ENSG00000204152.14	ENST00000478381.5	2623	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	45.6928521181801	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	-12	True	NA	NA	False	ATTAAA	-19	NA	49942048	49974850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_49942301_49943234_49943359_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_16656.known	chr10	+	2495	7	FSM	ENSG00000204152.14	ENST00000651259.3	2495	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	12.9925192151313	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	-8	True	NA	NA	False	ATTAAA	-19	NA	49942052	49974850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_16664.known	chr10	+	4642	31	FSM	ENSG00000099290.17	ENST00000282633.10	4642	31	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_16	70.6695282439484	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTACTTACTGT	1	True	NA	8	True	AATAAA	-23	NA	50067953	50133509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_16673.known	chr10	-	3717	11	FSM	ENSG00000198964.14	ENST00000361781.7	3717	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	11.7341382299681	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTTATTTCTACTGTG	-23	True	NA	-13	True	AATAAA	-20	NA	50623956	50305599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_50307322_50307981_50308149_50311261_50311416_50327204_50327323_50343491_50344346_50433475_50433557_50460672_50460815_50466889_50466933_50519830_50519922_50590152_50590248_50623706
transcript_16674.known	chr10	-	3634	10	FSM	ENSG00000198964.14	ENST00000429490.5	3634	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	38.8628484243541	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGTTCACATTCTTCAC	1807	False	50623997	1	True	AATAAA	-34	NA	50623977	50305585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_50307322_50307981_50308149_50311261_50311416_50343491_50344346_50433475_50433557_50460672_50460815_50466889_50466933_50519830_50519922_50590152_50590248_50623706
transcript_16679.known	chr10	+	5199	7	FSM	ENSG00000204147.11	ENST00000643505.1	5199	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	64.88108781113	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATAACCAAAAACTTAC	-9	True	NA	NA	False	AATAAA	-8	NA	50739935	50759240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50739984_50742914_50743011_50743672_50743742_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_16683.known	chr10	+	5180	7	FSM	ENSG00000204147.11	ENST00000645350.1	5180	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	66.7593106282229	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATAACCAAAAACTTAC	NA	False	NA	NA	False	AATAAA	-8	NA	50739921	50759240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50739984_50742914_50743011_50744696_50744733_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_16685.known	chr10	+	5145	6	FSM	ENSG00000204147.11	ENST00000647317.2	5145	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	42.418863728299	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCTCGACTCCCAGTTT	-9	True	NA	NA	False	AATAAA	-23	NA	50739935	50759255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50739984_50742914_50743011_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_16688.known	chr10	+	632	6	FSM	ENSG00000204147.11	ENST00000374006.1	632	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	54.488163852345	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTAGTGAACTACCA	3	True	NA	NA	False	AATGAA	-1	NA	50739947	50754809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50740003_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
transcript_16701.nnic	chr10	+	736	4	NNC	ENSG00000185532.20	novel	6957	18	NA	NA	-10123	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	13.7194104181711	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTTTCAGGTTTGTG	NA	False	NA	22	True	AATAAA	-38	NA	52036624	52062862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_52037113_52054483_52054562_52062536_52062632_52062787
transcript_16702.nnic	chr10	+	398	4	NNC	ENSG00000185532.20	novel	6957	18	NA	NA	-9008	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3095064303001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTTTCAGGTTTGTG	NA	False	NA	22	True	AATAAA	-38	NA	52037739	52062862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_52037890_52054483_52054562_52062536_52062632_52062787
transcript_16703.nnic	chr10	+	808	4	NNC	ENSG00000185532.20	novel	6957	18	NA	NA	-8154	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.3095064303001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTTTCAGGTTTGTG	NA	False	NA	22	True	AATAAA	-38	NA	52038593	52062862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_52039154_52054483_52054562_52062536_52062632_52062787
transcript_16705.nic	chr10	+	1220	2	ISM	ENSG00000185532.20	ENST00000643704.1	1549	6	-408	755877	-202	-415206	5prime_fragment	FALSE	canonical	3	31	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTTTATTACACTGAAT	330	False	NA	NA	False	AAAAAG	-4	NA	51074101	51153583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_51074902_51153163
transcript_16706.known	chr10	+	1297	8	FSM	ENSG00000185532.20	ENST00000645324.1	1297	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	13.5420735156046	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTTTCAGGTTTGTG	171	False	NA	22	True	AATAAA	-38	NA	51074303	52062862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_51074902_51153163_51153331_51467722_51467837_51804584_51804691_51907506_51907571_52054483_52054562_52062536_52062632_52062787
transcript_16707.known	chr10	+	478	2	FSM	ENSG00000185532.20	ENST00000645790.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	51467722	51568789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_51467837_51568425
transcript_16708.nnic	chr10	-	986	3	NNC	ENSG00000223502.1	novel	421	2	NA	NA	-6326	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	51074879	51062578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_51062931_51068484_51068553_51074313
transcript_16709.nnic	chr10	-	953	3	NNC	ENSG00000223502.1	novel	421	2	NA	NA	-6322	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	51074875	51062578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_51062931_51068484_51068553_51074342
transcript_16710.nnic	chr10	-	693	3	NNC	ENSG00000223502.1	novel	421	2	NA	NA	-6318	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	51074871	51062578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_51062931_51068484_51068553_51074598
transcript_16712.known	chr10	-	421	2	FSM	ENSG00000223502.1	ENST00000343087.4	421	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	51068553	51062578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_51062931_51068484
transcript_16713.known	chr10	-	4110	1	FSM	ENSG00000177613.9	ENST00000331173.6	4110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTATCTGATATGTTT	-3	True	NA	-4	True	AATAAA	-18	NA	51699595	51695485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_51695500_51699600
transcript_16714.known	chr10	+	1805	4	FSM	ENSG00000107984.10	ENST00000373970.4	1805	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	2.62466929133727	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGGTCAATATTTTT	-1	True	NA	NA	False	AATAAA	-14	NA	52314280	52317657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_52314678_52314922_52315086_52316294_52316436_52316553
transcript_16726.known	chr10	-	1961	7	FSM	ENSG00000122952.17	ENST00000494312.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	106.047814163654	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-3	True	NA	-6	True	AATAAA	-20	NA	56361259	56357437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56360384_56361195
transcript_16727.known	chr10	-	1851	8	FSM	ENSG00000122952.17	ENST00000395405.5	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_2	100.82658379614	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-17	True	NA	-6	True	AATAAA	-20	NA	56361273	56357437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_16728.known	chr10	-	1857	9	FSM	ENSG00000122952.17	ENST00000373944.8	1857	9	0	0	0	0	multi-exon	TRUE	canonical	3	618	junction_3	95.1051227589765	2349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-3	True	NA	18	True	AATAAA	-42	NA	56361259	56357226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_16729.known	chr10	-	1621	8	FSM	ENSG00000122952.17	ENST00000489649.6	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	236.638793031377	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTTTTCTCAAATA	-9	True	NA	-47	True	NA	NA	NA	56361265	56357478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360384_56361195
transcript_16730.known	chr10	-	807	9	FSM	ENSG00000122952.17	ENST00000361148.6	807	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	225.701649030307	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAACTCCTGAGTTCAG	-10	True	NA	-87	True	NA	NA	NA	56361266	56358142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_16732.known	chr10	+	1068	2	FSM	ENSG00000287016.1	ENST00000655098.1	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATAGTTTCTCTGAAGT	0	True	NA	2	True	AATAAA	-16	NA	56361478	56364714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_56361857_56364024
transcript_1674.nic	chr1	-	1404	6	NIC	ENSG00000162496.9	novel	2201	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	183.445250688046	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	3149	False	NA	-4	True	AATAAA	-19	NA	12616819	12567909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12616559
transcript_16746.known	chr10	+	2375	3	FSM	ENSG00000122873.12	ENST00000333926.6	2375	3	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_2	16	1308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGGTTAGGTTAAT	-12	True	NA	NA	False	ATTAAA	-34	NA	58269161	58289586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58269305_58277116_58277323_58287560
transcript_16748.known	chr10	+	2623	7	FSM	ENSG00000072401.15	ENST00000373910.9	2623	7	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	20.6350564708594	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAACTTGTTTGCCTTTGC	-1	True	NA	10	True	ATTAAA	-15	NA	58335005	58370748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58335226_58361337_58361402_58361494_58361527_58363608_58363687_58364770_58364877_58367922_58368017_58368719
transcript_16749.known	chr10	+	1121	8	FSM	ENSG00000108064.11	ENST00000373899.3	1121	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	194.291176393808	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGTATCTTTTTATTC	179	False	NA	NA	False	GATAAA	-17	NA	58385344	58395184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58385649_58386219_58386339_58386649_58386717_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
transcript_1675.known	chr1	-	2201	6	FSM	ENSG00000162496.9	ENST00000616661.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_5	30.4893424002552	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	5	True	NA	-4	True	AATAAA	-19	NA	12618210	12567909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153
transcript_16752.known	chr10	+	5025	7	FSM	ENSG00000108064.11	ENST00000487519.6	5025	7	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_4	42.6748039115458	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTTATATATTGGTT	-11	True	NA	39	True	AATAAA	-23	NA	58385409	58399220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
transcript_16756.known	chr10	+	663	6	FSM	ENSG00000108064.11	ENST00000395377.2	663	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_4	46.7101701987907	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCATATTCTCAGAACCA	137	False	NA	NA	False	AATACA	-16	NA	58385603	58394539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58390764_58390861_58394357
transcript_16757.known	chr10	+	973	6	FSM	ENSG00000108064.11	ENST00000373895.7	973	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	166.959396261486	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGGATCAGAGTAATC	13	True	NA	NA	False	GATAAA	-34	NA	58385433	58395288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58394357_58394415_58394927
transcript_16763.nic	chr10	+	965	4	ISM	ENSG00000108064.11	ENST00000395377.2	663	6	-580	5720	-321	-5720	5prime_fragment	FALSE	canonical	3	419	junction_2	32.4037034920393	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATCATTGAAATACT	633	False	NA	NA	False	AAAAAG	-23	NA	58385023	58388819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669
transcript_16765.known	chr10	-	3328	14	FSM	ENSG00000148541.13	ENST00000618804.5	3328	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.74131225864699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAACACAG	2	True	NA	-12	True	AATAAA	-17	NA	59362549	59246132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_59247738_59251574_59251677_59252798_59252999_59254347_59254444_59262433_59262646_59264084_59264167_59268552_59268692_59269898_59270110_59283362_59283448_59302800_59302865_59323987_59324107_59352269_59352475_59355886_59355944_59362398
transcript_16766.known	chr10	-	3033	12	FSM	ENSG00000148541.13	ENST00000611933.4	3033	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.13339780720256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATTTTATACAACAA	585	False	59362616	-58	True	ATTAAA	-28	NA	59362594	59246178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_59247738_59251574_59251677_59252798_59252999_59254347_59254444_59268552_59268692_59269898_59270110_59283362_59283448_59302800_59302865_59323987_59324107_59352269_59352475_59355886_59355944_59362398
transcript_16768.known	chr10	+	3521	5	FSM	ENSG00000165443.12	ENST00000373880.9	3521	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.78535710713571	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCAAGTCATTATTTAA	11	True	NA	NA	False	AATACA	-16	NA	59176642	59247770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_59176960_59234303_59234501_59236482_59236658_59238587_59238706_59245056
transcript_16769.known	chr10	-	3946	6	FSM	ENSG00000165449.12	ENST00000395348.8	3946	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	9.89949493661167	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTTGGTTGCTTTTTCT	21	True	NA	-4	True	AATAAA	-21	NA	59709850	59650763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_59652951_59653674_59654590_59664226_59664323_59672769_59672914_59684095_59684328_59709478
transcript_16770.known	chr10	-	5727	9	FSM	ENSG00000108091.11	ENST00000263102.7	5727	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	21.0561006599038	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTTTTTTCATTTCG	-8	True	NA	3	True	AATAAA	-36	NA	59906556	59788746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_59793112_59794472_59794598_59804419_59804521_59806921_59807079_59812634_59812796_59814651_59814756_59832524_59832654_59852552_59852703_59906121
transcript_16772.known	chr10	-	3811	21	FSM	ENSG00000151150.22	ENST00000355288.6	3811	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_20	19.9889969733351	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACCACCCACAT	-4	True	NA	NA	False	AAAAAG	-5	NA	60141016	60029689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60140351
transcript_16777.known	chr10	-	1226	3	FSM	ENSG00000151150.22	ENST00000510382.1	1226	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACTTAGATAGTACCTG	176	False	NA	NA	False	ATTAAA	-39	NA	60733324	60507500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_60508626_60615185_60615225_60733262
transcript_16778.known	chr10	-	493	3	FSM	ENSG00000151150.22	ENST00000486349.2	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTGTTTATTAAAGTT	497	False	NA	NA	False	ATTAAA	-23	NA	60140515	60138516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_60138722_60138963_60139088_60140351
transcript_16780.known	chr10	-	681	4	FSM	ENSG00000151150.22	ENST00000612776.4	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	37.4640568486056	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAGAAAAGAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	60059430	60029700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_60029827_60042671_60042757_60055657_60056037_60059339
transcript_16781.nnic	chr10	+	564	3	NNC	ENSG00000254271.1	novel	434	2	NA	NA	-1559	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAATATGGGGCATTA	NA	False	NA	NA	False	AATAAA	-16	NA	60732782	60741828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_60732914_60734342_60734429_60741481
transcript_16782.nnic	chr10	+	524	3	NNC	ENSG00000254271.1	novel	434	2	NA	NA	-794	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAATATGGGGCATTA	719	False	NA	NA	False	AATAAA	-16	NA	60733547	60741828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_60733639_60734342_60734429_60741481
transcript_16783.known	chr10	+	434	2	FSM	ENSG00000254271.1	ENST00000517854.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAATATGGGGCATTA	1513	False	NA	NA	False	AATAAA	-16	NA	60734341	60741828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_60734429_60741481
transcript_16788.known	chr10	+	1948	8	FSM	ENSG00000170312.17	ENST00000448257.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	434.511830232785	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTAAACTGTTTAACAA	-4	True	NA	-15	True	AAAAAG	-37	NA	60778492	60794828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791893_60792054_60792147_60792290_60793876
transcript_16799.known	chr10	+	1889	8	FSM	ENSG00000170312.17	ENST00000395284.8	1889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	483.17778871778	7721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	-1	True	NA	9	True	ATTAAA	-16	NA	60778477	60794852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792147_60792290_60793876
transcript_1680.known	chr1	-	539	4	FSM	ENSG00000162496.9	ENST00000464917.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	204.615628815483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATTCTCAGGAACCTACA	3173	False	NA	NA	False	NA	NA	NA	12616795	12568391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_12568425_12572727_12572854_12580522_12580667_12616559
transcript_16800.known	chr10	+	1733	7	FSM	ENSG00000170312.17	ENST00000316629.8	1733	7	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_4	460.558718659557	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	NA	False	NA	0	True	ATTAAA	-7	NA	60778453	60794843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60791889_60792054_60792147_60792290_60793876
transcript_16801.known	chr10	+	1884	9	NNC	ENSG00000170312.17	novel	1889	8	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	660.816918669612	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	-1	True	NA	0	True	ATTAAA	-7	NA	60778495	60794843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792122_60792130_60792132_60792290_60793876
transcript_16806.known	chr10	-	5087	6	FSM	ENSG00000196932.12	ENST00000399298.8	5087	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	2.93938769133981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAATGTGGATTTTTGCT	-3	True	NA	-11	True	ATTAAA	-20	NA	61453381	61406641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_61410747_61413458_61413536_61428925_61429147_61431218_61431333_61436169_61436249_61452890
transcript_16807.nic	chr10	-	1154	6	NIC	ENSG00000196932.12	novel	2520	7	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	3.38230690505755	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGCAAGAAGTAATCT	NA	False	NA	NA	False	AATAAA	-16	NA	61453447	61412892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_61412999_61413458_61413536_61428925_61429147_61431218_61431333_61436169_61436249_61452890
transcript_1681.nic	chr1	-	1890	4	NIC	ENSG00000162496.9	novel	2201	6	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_2	202.809160433042	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	5	True	NA	-4	True	AATAAA	-19	NA	12618258	12567909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_12568425_12572727_12572854_12580522_12580667_12617153
transcript_16810.nnic	chr10	+	893	3	NNC	ENSG00000237233.2	novel	863	3	NA	NA	-13	-27776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATCATTTGTAAATG	NA	False	NA	NA	False	AATAAA	-18	NA	61452625	61454180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_61453290_61453872_61453947_61454025
transcript_16814.known	chr10	-	518	4	FSM	ENSG00000196932.12	ENST00000277749.9	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGCAAGAAGTAATCT	9181	False	NA	NA	False	AATAAA	-16	NA	61431332	61412892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_61412999_61413458_61413536_61428925_61429147_61431218
transcript_16816.known	chr10	+	1688	8	FSM	ENSG00000183346.9	ENST00000648843.3	1688	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.84999104903714	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCATTATATTGAAGTG	0	True	NA	NA	False	AATACA	-26	NA	61662928	61766766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_61663033_61672631_61672736_61681142_61681313_61686040_61686186_61690548_61690622_61760058_61760182_61760862_61761004_61765938
transcript_1682.known	chr1	+	2027	4	FSM	ENSG00000204518.3	ENST00000376221.2	2027	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCGTCAGTGGTGAATT	NA	False	NA	NA	False	AATAAA	-15	NA	12644084	12667076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_12644715_12651122_12651340_12661790_12661855_12665960
transcript_16820.known	chr10	+	7492	10	FSM	ENSG00000150347.17	ENST00000279873.12	7492	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGGTGTGAGTAATCT	6	True	NA	10	True	AATAAA	-20	NA	61901698	62096944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_61901731_61902158_61902414_61940182_61940409_62000090_62000322_62050887_62051001_62057116_62057319_62059242_62059296_62069699_62069798_62085701_62085901_62090861
transcript_16822.known	chr10	+	3141	7	FSM	ENSG00000150347.17	ENST00000309334.5	3141	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.897527467855751	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGAGCTTCACTCCTT	390	False	NA	NA	False	NA	NA	NA	62049210	62093064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_62049484_62050887_62051001_62057116_62057319_62059242_62059296_62069699_62069798_62085701_62085901_62090861
transcript_16828.known	chr10	-	6886	12	FSM	ENSG00000182010.11	ENST00000373789.8	6886	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	70.7159373949953	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTAGCAATTTTATA	0	True	NA	-2	True	AATAAA	-13	NA	62268844	62193085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_62198444_62199753_62199862_62204856_62205023_62217117_62217250_62218194_62218302_62223237_62223333_62236065_62236264_62239647_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_16834.known	chr10	-	2076	5	FSM	ENSG00000182010.11	ENST00000395260.3	2076	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	33.4140688932072	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGTTATTCCTGGGA	21	True	NA	-11	True	AATAAA	-12	NA	62268707	62238156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_16843.known	chr10	+	3988	5	FSM	ENSG00000138311.18	ENST00000395254.8	3988	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGATATGTTTTGTCT	-24	True	NA	7	True	AATAAA	-18	NA	62374368	62402450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_62374459_62376180_62376937_62388395_62388577_62398739_62398778_62399527
transcript_16844.known	chr10	-	2979	2	FSM	ENSG00000122877.18	ENST00000242480.4	2979	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTGCAGAAATCATT	-7	True	NA	NA	False	AATAAA	-16	NA	62816366	62811995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_62814469_62815860
transcript_16848.known	chr10	+	1816	3	FSM	ENSG00000148572.16	ENST00000435510.6	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	247	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAACGTGGTTGATAGTT	NA	False	NA	34	True	AATAAA	-22	NA	63133246	63155031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_63133501_63152149_63152191_63153510
transcript_16849.known	chr10	+	1813	4	FSM	ENSG00000148572.16	ENST00000277746.11	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	18.9267594221045	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTTGAACGTGGTT	4	True	NA	27	True	AATAAA	-15	NA	63133327	63155024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_63133501_63146208_63146294_63152149_63152191_63153510
transcript_16857.nic	chr10	-	1500	7	ISM	ENSG00000171988.20	ENST00000542921.5	8149	25	-215	47363	-28	471	5prime_fragment	FALSE	canonical	3	100	junction_5	22.286019533929	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACTTCAAAAATAAATGGAG	NA	False	NA	NA	False	AATAAA	-3	NA	63269281	63214952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_16861.nic	chr10	-	1857	6	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	-28	934	combination_of_known_junctions	FALSE	canonical	3	47	junction_4	41.3114996096729	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACCAGAGCTGGGT	NA	False	NA	NA	False	AAAACA	-41	NA	63269281	63214489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63264650_63264765_63268662
transcript_16865.known	chr10	-	734	6	FSM	ENSG00000171988.20	ENST00000469152.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	24.0116638323961	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAGCAATGAACTCCC	-4	True	NA	-127	True	NA	NA	NA	63268875	63215423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_16867.nic	chr10	-	1195	5	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	-28	161	combination_of_known_junctions	FALSE	canonical	3	47	junction_3	44.8964085423322	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGACCCACTTTTTTTTT	NA	False	NA	34	True	NA	NA	NA	63269281	63215262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_63215456_63215552_63215697_63217206_63217332_63264650_63264765_63268662
transcript_16869.nnic	chr10	-	1974	3	NNC	ENSG00000171988.20	novel	8758	26	NA	NA	-34	-155319	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGCCAATTT	0	True	NA	NA	False	NA	NA	NA	63466011	63375195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_63376488_63380317_63380483_63465494
transcript_1687.nnic	chr1	+	1148	3	NNC	ENSG00000188984.12	novel	4055	4	NA	NA	-486	-8426	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGGTTTGGTCTG	NA	False	NA	6	True	AATAAA	-14	NA	12715623	12720333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_12715822_12716253_12716345_12719474
transcript_16872.nic	chr10	-	1057	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-34	212718	-34	-160066	5prime_fragment	FALSE	canonical	3	19	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAATGAAAATTTAAGA	0	True	NA	NA	False	NA	NA	NA	63466011	63379942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_63380483_63465494
transcript_16875.known	chr10	+	891	1	FSM	ENSG00000234369.1	ENST00000414123.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	297	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTATATGTCTTCCA	NA	False	NA	NA	False	ATTAAA	-19	NA	63222154	63223045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_63222200_63223000
transcript_16877.nnic	chr10	-	811	3	NNC	ENSG00000171988.20	novel	8758	26	NA	NA	-32	-156480	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGAAGCTTTTCCCCT	2	True	NA	NA	False	ATTAAA	-19	NA	63466009	63376356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_63376488_63380317_63380483_63465494
transcript_16879.nnic	chr10	-	1055	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-32	212718	-32	-160066	5prime_fragment	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAATGAAAATTTAAGA	2	True	NA	NA	False	NA	NA	NA	63466009	63379942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_63380483_63465494
transcript_16881.nnic	chr10	-	890	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-32	212883	-32	-160231	5prime_fragment	FALSE	canonical	3	19	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCTGGATGTGGTGGCA	2	True	NA	NA	False	AAAAAG	-35	NA	63466009	63380107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_63380483_63465494
transcript_16885.known	chr10	+	5172	8	FSM	ENSG00000165476.14	ENST00000373758.5	5172	8	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_6	31.3681236874868	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAACGGCATTTTTTT	6	True	NA	NA	False	AATAAA	-18	NA	63521400	63625128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169_63599284_63610186_63610335_63619654_63619801_63620812
transcript_16888.nic	chr10	+	616	5	ISM	ENSG00000165476.14	ENST00000373758.5	5172	8	29	25762	29	-21456	5prime_fragment	FALSE	canonical	3	395	junction_4	24.1660919471891	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATTTTGCTATATT	0	True	NA	NA	False	AATAAA	-31	NA	63521429	63599366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169
transcript_1689.nic	chr1	+	1584	2	ISM	ENSG00000188984.12	ENST00000359318.8	4055	4	-490	8427	-490	-8426	5prime_fragment	FALSE	canonical	1	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGGTTTGGTCTG	NA	False	NA	6	True	AATAAA	-14	NA	12715619	12720333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_12716345_12719474
transcript_16893.nnic	chr10	+	516	3	NNC	ENSG00000235356.2	novel	607	5	NA	NA	2436	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTAGGTCTATAATTTTC	NA	False	NA	NA	False	AATAAA	-45	NA	65273754	65315083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_65273914_65286040_65286114_65314799
transcript_16895.known	chr10	+	1102	7	FSM	ENSG00000228065.12	ENST00000669518.1	1102	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	12.3243210315574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTGAATGATTATAAAGT	NA	False	NA	NA	False	AGTAAA	-15	NA	65570445	65698274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570546_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65689502_65689612_65698102
transcript_16897.known	chr10	+	1686	7	FSM	ENSG00000228065.12	ENST00000600848.2	1686	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.5818344353945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGGAAGGCAGAAGGAGAG	-8	True	NA	NA	False	AATAAA	-16	NA	65570517	65698716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65689502_65689612_65698102
transcript_16907.known	chr10	+	1319	4	FSM	ENSG00000228065.12	ENST00000657227.2	1320	4	1	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	8.2192186706253	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGATCCAAGTGGTGAAATC	-13	True	NA	NA	False	AATAAA	-26	NA	65570512	65586279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484
transcript_16909.known	chr10	+	1389	5	FSM	ENSG00000228065.12	ENST00000658125.1	1389	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.11951543294907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGAGCACATTGAATT	-6	True	NA	NA	False	ATTAAA	-18	NA	65570519	65616189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635
transcript_16910.known	chr10	+	2006	6	FSM	ENSG00000228065.12	ENST00000670657.1	2006	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.6207344378814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTATGCATGTGTGTT	-6	True	NA	NA	False	AATAAA	-23	NA	65570519	65660839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65659794
transcript_16913.known	chr10	-	1740	7	FSM	ENSG00000183230.18	ENST00000684489.1	1740	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAAATTAGCCAGTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	66878270	66372653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_66373561_66379151_66379353_66520616_66520774_66621691_66621785_66766263_66766417_66775443_66775525_66878122
transcript_16914.known	chr10	+	6049	3	FSM	ENSG00000198739.11	ENST00000361320.5	6049	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTCAAGTCTCTATTT	0	True	NA	NA	False	AATATA	-18	NA	66926035	67101551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_66926588_66926920_66928453_67097586
transcript_16916.known	chr10	-	1221	5	FSM	ENSG00000108176.15	ENST00000225171.7	1221	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1.11803398874989	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAATTTATAATTCAA	-4	True	NA	NA	False	AATAAA	-19	NA	67838188	67796668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_67797211_67805582_67805788_67811523_67811664_67823313_67823393_67837933
transcript_16918.known	chr10	-	1064	3	FSM	ENSG00000108176.15	ENST00000339758.7	1064	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAGAAATTACCTCATA	8	True	NA	NA	False	NA	NA	NA	67838096	67810841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_67811664_67823313_67823393_67837933
transcript_16920.known	chr10	+	1222	1	FSM	ENSG00000272892.1	ENST00000610279.1	1222	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	NA	False	NA	4	True	ACTAAA	-15	NA	67849524	67850746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_67849500_67850700
transcript_16921.known	chr10	+	4107	9	FSM	ENSG00000096717.12	ENST00000212015.11	4107	9	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_4	37.7491721763537	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTTAAGGTATATAAT	-1	True	NA	44	True	ATTAAA	-31	NA	67884655	67918390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_67885152_67887416_67887534_67888881_67889124_67891401_67891555_67906789_67906938_67908045_67908126_67909255_67909443_67912473_67913032_67916264
transcript_16924.nic	chr10	+	3826	9	NIC	ENSG00000096717.12	novel	3587	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	137.790091715624	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTACATTGTTTAAGGTATA	474	False	NA	40	True	ATTAAA	-27	NA	67885180	67918386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_67885400_67887416_67887534_67888881_67889124_67891401_67891555_67906789_67906938_67908045_67908126_67909255_67909443_67912473_67913032_67916264
transcript_16930.known	chr10	+	673	4	FSM	ENSG00000096717.12	ENST00000497639.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	195.6635434163	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGATATTGAATATT	474	False	NA	NA	False	NA	NA	NA	67885180	67891496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_67885400_67887416_67887534_67888881_67889124_67891401
transcript_16932.known	chr10	-	4445	26	FSM	ENSG00000148634.16	ENST00000395198.7	4445	26	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	31.7042836222489	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCAGTGGTTCTCAT	3	True	NA	-9	True	AATAAA	-21	NA	68075283	67921907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67959112_67959137_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_16934.known	chr10	-	4424	25	FSM	ENSG00000148634.16	ENST00000373700.9	4424	25	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_11	16.6724989795238	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGTGGTTCTCATATA	3	True	NA	-6	True	AATAAA	-24	NA	68075283	67921904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_16941.nic	chr10	-	2306	16	ISM	ENSG00000148634.16	ENST00000412272.6	4211	24	-65	44708	-47	-1824	5prime_fragment	FALSE	canonical	3	84	junction_2	17.2991971554238	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGTTTTGAAATGAGAA	-1	True	NA	-19	True	AATAAA	-14	NA	68075348	67966615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_16944.known	chr10	-	3385	4	FSM	ENSG00000148634.16	ENST00000492996.6	3385	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	59.3520569708133	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATTACTTGGCTTGC	3	True	NA	-2	True	AATAAA	-18	NA	68075283	68067688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68070600_68072882_68073187_68073656_68073687_68075143
transcript_16949.known	chr10	-	944	7	FSM	ENSG00000148634.16	ENST00000513996.5	944	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.150967480905	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTGGTCAGCTAGGTC	29	True	NA	NA	False	NA	NA	NA	68075257	68033999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68034187_68038092_68038170_68039416_68039489_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_16952.known	chr10	-	4502	18	FSM	ENSG00000204130.14	ENST00000388768.6	4502	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_17	8.72612907993706	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGCTTTAAAAGGGCAA	84	False	NA	-18	True	AATAAA	-39	NA	68407189	68343518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68345912_68346006_68346085_68355352_68355402_68363589_68363685_68363983_68364114_68376852_68376973_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68406753
transcript_16953.known	chr10	-	4269	18	FSM	ENSG00000204130.14	ENST00000602465.6	4269	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.86054782091621	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTGGTGTATGCCCTA	-4	True	NA	93	True	AATAAA	-22	NA	68407277	68343407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68345912_68346006_68346085_68355352_68355402_68363589_68363685_68363983_68364114_68376852_68376973_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68407185
transcript_16980.known	chr10	-	2588	10	FSM	ENSG00000108187.16	ENST00000358769.7	2588	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	4.44999653211129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGCCTTAACTTACTG	9	True	NA	NA	False	AATAAA	-17	NA	68332928	68282659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68284290_68285347_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306904_68332783
transcript_16981.known	chr10	-	2165	10	FSM	ENSG00000108187.16	ENST00000309049.8	2165	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	4.26296135405575	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGAATGT	-13	True	NA	NA	False	NA	NA	NA	68332906	68283063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68284290_68285347_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306907_68332783
transcript_16984.known	chr10	-	1349	9	FSM	ENSG00000108187.16	ENST00000495025.2	1349	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	2.91279504943276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGAGAGGTTATTTATA	5577	False	NA	NA	False	AATAAA	-18	NA	68333049	68285080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306907_68332783
transcript_16997.known	chr10	+	1332	10	FSM	ENSG00000096746.18	ENST00000354695.5	1332	10	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_4	343.12305678687	16363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGTTGATACTTTTT	26	False	NA	20	True	AATAAA	-16	NA	68332121	68342272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_16998.known	chr10	+	2356	10	FSM	ENSG00000096746.18	ENST00000265866.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_4	356.824817827017	7817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	-1	True	NA	21	True	AATAAA	-21	NA	68332063	68343193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_16999.known	chr10	+	3356	8	FSM	ENSG00000096746.18	ENST00000469172.5	3356	8	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_2	390.329687964063	2457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTTGATACTTTTTA	2638	False	NA	21	True	AATAAA	-17	NA	68331173	68342273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68332217_68337198_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_17.known	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00042_+_0_1000
transcript_17000.known	chr10	+	752	6	FSM	ENSG00000096746.18	ENST00000480987.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	518.948166968533	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTAAAGATAAAAATAACAT	11	False	NA	NA	False	NA	NA	NA	68332075	68341287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68332236_68337198_68337334_68338502_68338643_68339139_68339227_68339439_68339556_68341173
transcript_17001.known	chr10	+	635	5	FSM	ENSG00000096746.18	ENST00000486854.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_4	386.1537906068	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGACAGAATGAGAGATGG	7	False	NA	13	True	NA	NA	NA	68332102	68339201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139
transcript_17005.nic	chr10	-	4283	21	NIC	ENSG00000138346.15	novel	4267	21	NA	NA	-16	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_8	54.9076497402684	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	NA	False	NA	-4	True	AATAAA	-18	NA	68471989	68414063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_68415106_68416706_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_17012.nic	chr10	-	1828	11	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	132	17465	-16	4400	internal_fragment	FALSE	canonical	3	208	junction_2	18.5905890170269	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGATATAGATACCCCAT	NA	False	NA	NA	False	AAGAAA	-5	NA	68471989	68432453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_17014.nic	chr10	-	2959	10	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	132	20834	-16	1031	internal_fragment	FALSE	canonical	3	208	junction_1	19.2975403025462	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTTGTGATATAAGT	NA	False	NA	-3	True	AATAAA	-18	NA	68471989	68435822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_17016.nic	chr10	-	1199	3	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	132	52501	-16	677	internal_fragment	FALSE	canonical	3	247	junction_1	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGCTTTTTATTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	68471989	68467489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_68468307_68469980_68470164_68471790
transcript_17017.known	chr10	-	4267	21	FSM	ENSG00000138346.15	ENST00000358410.8	4267	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	72.3201908183323	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	-43	True	NA	-4	True	AATAAA	-18	NA	68471973	68414063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68415108_68416708_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_17018.known	chr10	+	437	1	FSM	ENSG00000226493.1	ENST00000414397.1	437	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	42	False	NA	NA	False	AATACA	-33	NA	68499531	68499968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68499500_68500000
transcript_17021.known	chr10	+	9612	12	FSM	ENSG00000138336.9	ENST00000373644.5	9612	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_8	38.6298390212788	641	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCATCTAACATTATTT	3	True	NA	12	True	AATAAA	-32	NA	68560336	68694487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68560743_68572216_68574253_68600980_68601035_68644697_68647006_68651845_68651937_68652500_68652595_68667044_68667257_68672894_68673046_68681398_68681489_68682835_68682974_68686355_68686708_68690807
transcript_17022.nnic	chr10	+	414	2	Genic_Genomic	ENSG00000213025.2	novel	357	1	NA	NA	-35	139	multi-exon	FALSE	canonical	0	0	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCTTAAGAAAACCAGAT	NA	False	NA	NA	False	AATAAA	-43	NA	68632335	68632866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_68632412_68632528
transcript_17023.known	chr10	+	2295	1	FSM	ENSG00000260400.1	ENST00000562082.1	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATAGTCTAATTTTTCT	NA	False	NA	32	True	AATAAA	-21	NA	68698499	68700794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68698500_68700800
transcript_17024.known	chr10	+	3521	24	FSM	ENSG00000060339.14	ENST00000543719.5	3521	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	171.297980459902	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCCATGTAGTGATGA	-4	True	NA	-60	True	AATGAA	-43	NA	68721225	68791266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721289_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_17028.nic	chr10	+	2601	18	ISM	ENSG00000060339.14	ENST00000265872.11	4658	25	-83	21046	12	0	5prime_fragment	FALSE	canonical	0	0	junction_14	122.623795226332	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	72	False	NA	51	True	GATAAA	-13	NA	68721155	68771331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_1703.known	chr1	+	2801	6	FSM	ENSG00000162493.17	ENST00000376057.8	2801	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_5	203.912334104634	2319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	-10	True	NA	13	True	AATAAA	-19	NA	13583761	13617957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614406_13615904
transcript_17037.known	chr10	+	2432	17	FSM	ENSG00000060339.14	ENST00000541012.5	2432	17	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	110.828820005222	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTAATAACAACCTGC	-3	True	NA	15	True	GATAAA	-30	NA	68721226	68771444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_1704.known	chr1	+	568	4	FSM	ENSG00000116731.23	ENST00000505823.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	17.1464281994822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTTCTGCAGCCCAGC	9	True	NA	-72	True	NA	NA	NA	13749435	13823419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13749488_13773077_13773189_13816426_13816571_13823158
transcript_1705.nic	chr1	+	1068	3	ISM	ENSG00000116731.23	ENST00000413440.5	6175	4	-24	8814	-24	633	5prime_fragment	FALSE	canonical	3	37	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGGAACTCATACTAA	-7	True	NA	NA	False	AAAAAG	-1	NA	13749378	13779265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_13749488_13773077_13773189_13778417
transcript_17061.known	chr10	+	701	3	FSM	ENSG00000060339.14	ENST00000539250.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	30.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GATGAGAGAAAAGATAAAAA	NA	False	NA	51	True	GATAAA	-13	NA	68760809	68771331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68761193_68765887_68766080_68771205
transcript_17062.known	chr10	+	4658	25	FSM	ENSG00000060339.14	ENST00000265872.11	4658	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	129.516347906355	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTACTTCCTTCAGAA	9	True	NA	9	True	ATTAAA	-19	NA	68721238	68792377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_17063.known	chr10	+	3224	22	FSM	ENSG00000060339.14	ENST00000539539.5	3224	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	154.113616538971	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAACAGGTAAGGGT	9	True	NA	121	True	AAAAAG	-37	NA	68721238	68788316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142
transcript_17064.known	chr10	+	754	6	FSM	ENSG00000060339.14	ENST00000538031.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	169.383116041712	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAGGTAAACTTAATGAGG	-14	True	NA	NA	False	NA	NA	NA	68721215	68742564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721407_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375
transcript_17065.nic	chr10	+	818	2	ISM	ENSG00000165730.16	ENST00000642869.1	3630	4	58649	0	58649	0	3prime_fragment	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGTAGTGAATTTTTT	NA	False	NA	14	True	AATATA	-16	NA	68886272	68893060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_68886619_68892588
transcript_17071.nic	chr10	+	2675	16	NIC	ENSG00000107625.14	novel	2501	15	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	78.3361985291602	1707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	NA	False	NA	25	True	AATAAA	-28	NA	68901252	68946847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_68901472_68906225_68906338_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_17075.known	chr10	+	2501	15	FSM	ENSG00000107625.14	ENST00000373585.8	2501	15	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	21.3394575605752	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	18	True	NA	25	True	AATAAA	-28	NA	68901314	68946847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_1708.known	chr1	+	1843	4	FSM	ENSG00000171729.14	ENST00000376014.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.1154629969146	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTACACTTAACTAGT	0	True	NA	NA	False	NA	NA	NA	15152565	15220339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15152785_15210489_15210563_15214894_15215432_15219325
transcript_1709.known	chr1	+	1861	4	FSM	ENSG00000171729.14	ENST00000434578.6	1861	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.4560308258262	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAGAAAACTGTA	27	True	NA	-74	True	NA	NA	NA	15153767	15220393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15153955_15210489_15210563_15214894_15215432_15219329
transcript_17092.nic	chr10	+	507	2	ISM	ENSG00000107625.14	ENST00000373585.8	2501	15	-116	39903	-87	-6286	5prime_fragment	FALSE	canonical	3	242	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCGAGTATCATCTTT	NA	False	NA	NA	False	AAGAAA	-41	NA	68901198	68906944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_68901472_68906710
transcript_17093.nnic	chr10	+	421	2	NNC	ENSG00000107625.14	novel	888	6	NA	NA	-81	-11026	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGGAAAAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68901204	68902204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_68901472_68902050
transcript_17094.known	chr10	+	888	6	FSM	ENSG00000107625.14	ENST00000471475.1	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	101.767185280915	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGCGTGGCGTGTTT	20	True	NA	NA	False	NA	NA	NA	68901316	68913230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68901472_68906225_68906338_68906710_68907008_68910306_68910383_68911067_68911247_68913161
transcript_17095.known	chr10	+	4829	15	FSM	ENSG00000165732.14	ENST00000620315.2	4776	15	29	-82	29	-1	multi-exon	FALSE	canonical	3	32	junction_1	182.665524600432	4168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTGGCTTTTGTTTT	-1	True	NA	12	True	AATAAA	-15	NA	68956439	68985067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68956749_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_1710.known	chr1	+	766	3	FSM	ENSG00000171729.14	ENST00000451326.6	766	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGAGGCTGCCTCAAGGT	11	False	NA	NA	False	NA	NA	NA	15152576	15219346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15152785_15214894_15215432_15219325
transcript_17105.known	chr10	+	4664	15	FSM	ENSG00000165732.14	ENST00000354185.9	4664	15	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_10	60.1601603884097	6505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTGGCTTTTGTTTTC	-3	True	NA	13	True	AATAAA	-16	NA	68956169	68985068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68956313_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_17106.known	chr10	+	2583	8	FSM	ENSG00000198954.9	ENST00000635779.2	2583	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	169.702140017534	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	6	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69007626_69007752_69008840_69008926_69010899_69011016_69015540
transcript_17107.known	chr10	+	2533	8	FSM	ENSG00000198954.9	ENST00000638119.2	2533	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	166.115155533621	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	6	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68989259_68995203_68995279_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_17108.known	chr10	+	2462	7	FSM	ENSG00000198954.9	ENST00000361983.7	2462	7	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_6	38.2041300850517	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTTCCTTTTTGTTT	6	True	NA	NA	False	AATAAA	-29	NA	68988802	69016982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_17109.known	chr10	+	2059	3	FSM	ENSG00000198954.9	ENST00000627949.4	2059	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	0.5	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	1523	False	NA	NA	False	AATAAA	-25	NA	69008420	69016978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69008926_69010899_69011016_69015540
transcript_17112.known	chr10	+	4227	9	FSM	ENSG00000122958.15	ENST00000263559.11	4227	9	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_8	70.4765031765907	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTCATTGTT	-27	True	NA	NA	False	ATTAAA	-21	NA	69124177	69174412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
transcript_17116.known	chr10	+	2554	8	FSM	ENSG00000122958.15	ENST00000395098.5	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	261.742746425039	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGAGCTTGCTGTTT	84	False	NA	16	True	AATAAA	-12	NA	69124151	69172856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69171155
transcript_1712.nnic	chr1	-	742	2	Antisense	novelGene_ENSG00000142621.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTCCCCCTTTTTCCCT	NA	False	NA	NA	False	NA	NA	NA	15388624	15385129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_15385605_15388357
transcript_17124.nic	chr10	+	2616	16	NIC	ENSG00000156502.14	novel	2477	15	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	3	17	junction_2	84.6329066550883	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	-26	True	NA	64	True	AATAAA	-14	NA	69180229	69209093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_69180563_69182519_69182655_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_17131.known	chr10	+	2477	15	FSM	ENSG00000156502.14	ENST00000359655.9	2477	15	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	26.9057311245567	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	-22	True	NA	64	True	AATAAA	-14	NA	69180233	69209093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_17132.known	chr10	+	2392	6	FSM	ENSG00000156502.14	ENST00000471069.5	2392	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	12.3028451993838	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTTTACTATTTGGTAG	-6	True	NA	NA	False	ATTAAA	-11	NA	69180249	69193263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654
transcript_17133.known	chr10	+	666	2	FSM	ENSG00000156502.14	ENST00000497254.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATATGCATTTACTC	5077	False	NA	70	True	AATAAA	-20	NA	69207775	69209099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69207942_69208599
transcript_17134.known	chr10	+	3602	18	FSM	ENSG00000156515.24	ENST00000359426.7	3602	18	0	0	0	0	multi-exon	FALSE	canonical	3	1202	junction_7	113.430465873306	2926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCGAGTGATGCTTAATG	-34	True	NA	29	True	AGTAAA	-18	NA	69318846	69401882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69319011_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
transcript_1714.known	chr1	+	2422	4	FSM	ENSG00000142634.13	ENST00000375980.9	2422	4	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_2	35.4902177445498	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATGGTTCTTGATG	-28	True	NA	20	True	GATAAA	-15	NA	15409887	15430339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15410280_15425870_15426019_15427149_15427285_15428592
transcript_17142.known	chr10	+	1703	8	FSM	ENSG00000099282.10	ENST00000373290.7	1703	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.2120377146637	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	-30	True	NA	20	True	AATAAA	-22	NA	69451464	69507666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69451691_69483690_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_17148.nnic	chr10	+	1413	6	NIC	ENSG00000099282.10	novel	1703	8	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	36.124230095602	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	-1	True	NA	20	True	AATAAA	-22	NA	69451493	69507666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_69451691_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_17151.known	chr10	-	1560	2	FSM	ENSG00000122859.5	ENST00000242462.5	1560	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCATCTTTTTTTTTTAA	1	True	NA	NA	False	NA	NA	NA	69573422	69571697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_69573045_69573209
transcript_17156.nnic	chr10	+	489	3	NNC	ENSG00000236154.2	novel	533	3	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.5	150	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATTGTAAAGTGGAGTGC	1908	False	NA	14	True	AATAAA	-28	NA	69574867	69577154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_69575066_69576018_69576138_69576982
transcript_17162.known	chr10	+	1073	4	FSM	ENSG00000171224.9	ENST00000373279.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	27.471197037382	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	-9	True	NA	114	True	AATAAA	-17	NA	69630246	69633596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69630314_69631479_69631548_69631708_69631840_69632789
transcript_17166.known	chr10	+	746	3	FSM	ENSG00000171224.9	ENST00000491890.1	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	32	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGCAGGCATATTTG	-5	True	NA	NA	False	NA	NA	NA	69630250	69633112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69630314_69631479_69631840_69632789
transcript_17167.nnic	chr10	+	1037	3	NIC	ENSG00000171224.9	novel	1073	4	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	79	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	NA	False	NA	114	True	AATAAA	-17	NA	69630214	69633596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_69630314_69631708_69631840_69632789
transcript_17184.known	chr10	+	1120	13	FSM	ENSG00000197467.17	ENST00000683952.1	1120	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	17.4443559799597	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACATGGCAATTCAT	NA	False	NA	-1	True	ATTAAA	-4	NA	69924963	69959129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69925008_69925803_69925873_69927086_69927111_69928936_69929000_69930042_69930088_69930399_69930553_69936755_69936783_69937634_69937716_69944124_69944179_69945670_69945725_69947306_69947343_69957003_69957043_69958698
transcript_17186.known	chr10	+	1932	9	FSM	ENSG00000099284.15	ENST00000373255.9	1932	9	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_2	46.6380678737874	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTTATTGCAACATT	-9	True	NA	30	True	AATAAA	-25	NA	70052845	70112282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_17187.known	chr10	-	3134	9	FSM	ENSG00000042286.15	ENST00000307864.3	3134	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	9.3799986673773	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGGATCTTTTATTTT	4	True	NA	NA	False	AATAAA	-19	NA	70132825	70112270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70132733
transcript_17188.nnic	chr10	-	1502	9	Fusion	ENSG00000042286.15_ENSG00000156521.14	novel	3134	9	NA	NA	-11	785	multi-exon	FALSE	canonical	2	7	junction_8	19.3063299205209	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGGATACTTTCTGGG	5046	False	70146739	-16	True	ATTAAA	-12	NA	70146711	70113989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70146532
transcript_17194.known	chr10	+	1671	7	FSM	ENSG00000099284.15	ENST00000676896.1	1671	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	185.58144363654	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTCTTACAACATATT	NA	False	NA	14	True	AATAAA	-9	NA	70075599	70112266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70109032_70109208_70111517
transcript_17198.known	chr10	-	2620	4	FSM	ENSG00000156521.14	ENST00000479086.1	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	53.2228021309163	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTGTGTCTCTGAGC	-11	True	NA	-4	True	AATAAA	-12	NA	70146676	70137982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70146532
transcript_17199.nnic	chr10	-	1317	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	-18	-1225	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	63.5627424063989	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	5039	False	70146739	-18	True	AATAAA	-18	NA	70146718	70139207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_70140142_70142667_70142854_70143841_70143973_70146652
transcript_1720.known	chr1	-	2808	9	FSM	ENSG00000132906.18	ENST00000333868.10	2808	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	25.8018289080445	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCATAGTTGTCA	10	True	NA	-4	True	AATAAA	-14	NA	15524215	15491400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
transcript_17201.nnic	chr10	-	1113	2	NIC	ENSG00000156521.14	novel	2620	4	NA	NA	-11	-1225	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	5046	False	70146739	-18	True	AATAAA	-18	NA	70146711	70139207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_70140142_70146532
transcript_17202.nnic	chr10	-	1022	2	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	-40	-1225	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-1	True	NA	-18	True	AATAAA	-18	NA	70146740	70139207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_70140142_70146652
transcript_17204.known	chr10	-	5981	8	FSM	ENSG00000079332.15	ENST00000373242.6	5981	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	428.151174903712	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-28	True	NA	-16	True	ATTAAA	-14	NA	70170523	70147288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689_70162760_70170412
transcript_1721.known	chr1	-	3095	7	FSM	ENSG00000116771.6	ENST00000375826.4	3095	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	5.74456264653803	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTAATCTTAAAATAAC	-2	True	NA	-17	True	ATTAAA	-21	NA	15585051	15571698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15573725_15574756_15574842_15577684_15577865_15578858_15579055_15580093_15580143_15583192_15583396_15584695
transcript_17222.known	chr10	-	1292	11	FSM	ENSG00000180817.12	ENST00000373232.8	1292	11	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_8	99.9847988446244	8871	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTAGGATATTTTTA	-1	True	NA	-5	True	AATAAA	-16	NA	70233429	70202834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70203187_70204872_70204916_70206263_70206334_70209204_70209291_70209557_70209686_70213462_70213590_70214499_70214587_70217811_70217932_70218763_70218818_70230340_70230400_70233263
transcript_17223.known	chr10	-	3095	5	FSM	ENSG00000172731.15	ENST00000373224.5	3095	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	33.9512518178638	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTGGTGTTTGATT	34	False	NA	-4	True	AATAAA	-19	NA	70382589	70298972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382493
transcript_17224.known	chr10	-	3074	5	FSM	ENSG00000172731.15	ENST00000446961.4	3074	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	10.0249688278817	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-2	True	NA	-6	True	AATAAA	-17	NA	70382625	70298974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382548
transcript_17225.known	chr10	-	2959	4	FSM	ENSG00000172731.15	ENST00000395010.5	2959	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	24.9131825880731	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	NA	False	NA	-1	True	AATAAA	-22	NA	70382650	70298969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70382548
transcript_17226.known	chr10	-	2906	4	FSM	ENSG00000172731.15	ENST00000357631.6	2906	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	31.2089730686545	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-3	True	NA	-7	True	AATAAA	-16	NA	70382626	70298975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70340552_70340703_70376451_70376597_70382548
transcript_17228.known	chr10	-	2924	4	FSM	ENSG00000172731.15	ENST00000358141.6	2924	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	34.1207007873845	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-3	True	NA	-7	True	AATAAA	-16	NA	70382626	70298975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70323862_70324031_70376451_70376597_70382548
transcript_17229.known	chr10	+	7491	3	FSM	ENSG00000148730.7	ENST00000373218.5	7491	3	0	0	0	0	multi-exon	FALSE	canonical	3	1319	junction_1	14	343	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTTTTAATTTTTTA	-2	True	NA	22	True	AGTAAA	-16	NA	70404144	70428618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_70404547_70419913_70420100_70421715
transcript_17234.known	chr10	-	2058	3	FSM	ENSG00000156574.10	ENST00000287139.8	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	30.5	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAGACTGAATAGGA	-1	True	NA	NA	False	ATTAAA	-36	NA	70441681	70431935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70433089_70435285_70435984_70441474
transcript_17235.nnic	chr10	-	1928	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-805	-379	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	76.5	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCCAGCTGGTGCC	NA	False	NA	-8	True	AATAAA	-15	NA	70442486	70432314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_17238.nnic	chr10	-	1791	3	NNC	ENSG00000156574.10	novel	2058	3	NA	NA	-805	297	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	76.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGCCTCAGGCTGGG	NA	False	NA	-4	True	ATTAAA	-14	NA	70442486	70432451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_70433089_70435285_70435984_70442030
transcript_17239.known	chr10	+	5778	15	FSM	ENSG00000166224.17	ENST00000373202.8	5778	15	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	15.7201287838106	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTGTTACCTGT	5	True	NA	NA	False	AATAAA	-25	NA	70815947	70881184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_70816127_70816810_70816881_70844472_70844639_70851142_70851211_70854707_70854856_70857613_70857691_70859370_70859500_70868344_70868434_70869791_70869898_70871047_70871147_70871836_70871987_70873350_70873590_70875401_70875549_70876540_70876662_70877194
transcript_1724.known	chr1	+	10667	10	FSM	ENSG00000197312.12	ENST00000480945.6	10667	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	10.8832184782097	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTTTGATCAATTTCT	4	True	NA	16	True	AATAAA	-16	NA	15617457	15669044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15617809_15626668_15626799_15630324_15630562_15633438_15633566_15638306_15638435_15643521_15643651_15649719_15649824_15651705_15651896_15656616_15656680_15659836
transcript_17243.known	chr10	-	732	4	FSM	ENSG00000166228.9	ENST00000493228.1	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	268.130565210309	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTCCGGGGGAAGGG	3315	False	NA	NA	False	NA	NA	NA	70888254	70883931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70887852
transcript_17248.known	chr10	-	787	4	FSM	ENSG00000166228.9	ENST00000299299.4	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	105.707142615814	7026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGCTCTAGAAACTTC	16	True	NA	-7	True	AATAAA	-18	NA	70888565	70883509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70888530
transcript_17249.known	chr10	-	389	3	FSM	ENSG00000166228.9	ENST00000493961.5	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	277.5	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATGGTCTCTTCAGTT	5670	False	NA	0	True	AATACA	-35	NA	70885899	70882279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70882486_70885151_70885233_70885797
transcript_17254.known	chr10	-	472	2	FSM	ENSG00000237512.7	ENST00000449737.5	472	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTGTTTGGTTTCATT	464	False	NA	-3	True	AAGAAA	-16	NA	71217825	71217223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_71217636_71217765
transcript_17255.known	chr10	-	647	2	FSM	ENSG00000237512.7	ENST00000447119.3	717	2	66	4	66	0	multi-exon	FALSE	canonical	3	12	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTGTTTGGTTTCATT	18	True	NA	-3	True	AAGAAA	-16	NA	71218228	71217223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_71217636_71217993
transcript_17257.known	chr10	+	2256	6	FSM	ENSG00000198246.9	ENST00000373189.6	2256	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	17.8370401132026	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTCATTGATGTCT	3	True	NA	16	True	AATAAA	-16	NA	71319258	71363385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_17260.known	chr10	+	2136	5	FSM	ENSG00000198246.9	ENST00000644591.1	2136	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	42.9243520626695	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTCAAGGGCGTAATAAAT	6	True	NA	-18	True	NA	NA	NA	71319261	71363351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_71319311_71322755_71323055_71351561_71351789_71356080_71356244_71361953
transcript_17261.known	chr10	+	1927	4	FSM	ENSG00000198246.9	ENST00000644088.1	1927	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54.7133946630581	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATTGATGTCTCTGTT	-3	True	NA	21	True	AATAAA	-21	NA	71319282	71363390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_71319311_71322755_71323055_71356080_71356244_71361953
transcript_17263.known	chr10	+	1450	10	FSM	ENSG00000107736.22	ENST00000643732.1	1450	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.62225461606333	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGGCTCCCTTGACCT	NA	False	NA	NA	False	AATAAA	-17	NA	71512112	71646782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_71512318_71566741_71566937_71570789_71570919_71577913_71577993_71615503_71615617_71617204_71617394_71635237_71635298_71643860_71643867_71645830_71645981_71646458
transcript_17268.nnic	chr10	-	789	2	Antisense	novelGene_ENSG00000107736.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTGGGTGGTTTCTTA	NA	False	NA	-1	True	ATTAAA	-23	NA	71659147	71654484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_-_71654958_71658831
transcript_1727.known	chr1	+	4134	20	FSM	ENSG00000116786.13	ENST00000375799.8	4134	20	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	44.877487893905	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTCACTGGCCCTTTT	-5	True	NA	21	True	AATAAA	-22	NA	15684319	15734769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15684619_15716236_15716344_15716706_15716817_15717892_15717993_15718537_15718626_15719733_15719921_15721328_15721389_15725316_15725546_15727013_15727833_15728078_15728149_15728266_15728358_15728668_15728734_15729101_15729191_15729796_15729930_15730531_15730723_15731191_15731258_15731888_15732049_15732349_15732530_15732611_15732729_15733796
transcript_17271.known	chr10	-	2748	14	FSM	ENSG00000197746.15	ENST00000394936.8	2748	14	0	0	0	0	multi-exon	FALSE	canonical	3	4305	junction_5	516.772013183248	4868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCCTAATGTTTCTGT	-3	True	NA	-28	True	AATAAA	-16	NA	71851251	71816297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822008_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_17272.known	chr10	-	2830	14	NNC	ENSG00000197746.15	novel	2748	14	NA	NA	-74	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1487.63537795774	3777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCTAATGTTTCTG	9125	False	NA	28	True	AATAAA	-15	NA	71851325	71816298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822017_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_17273.known	chr10	-	5224	11	FSM	ENSG00000107742.14	ENST00000373109.7	5224	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5.838664230798	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGCAATACTCTGAT	9279	False	72088560	0	True	AATAAA	-17	NA	72088551	72059033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72062906_72063024_72063163_72064177_72064241_72066901_72067121_72067612_72067733_72068186_72068302_72070311_72070427_72072143_72072259_72072502_72072549_72072901_72072911_72088139
transcript_17278.nic	chr10	-	2165	11	NIC	ENSG00000138303.18	novel	2270	13	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	52.2858489459624	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	797	False	NA	-13	True	ATTAAA	-15	NA	72216334	72096521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_72097451_72102849_72102968_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_17281.known	chr10	-	2479	10	FSM	ENSG00000138303.18	ENST00000672957.1	2479	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	10.3863633293794	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTATGATCACA	15	True	NA	-26	True	AATAAA	-14	NA	72216276	72096031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_17286.known	chr10	-	1349	9	FSM	ENSG00000138303.18	ENST00000672940.1	1349	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	42.0029760850347	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	14	True	NA	-10	True	CATAAA	-19	NA	72216277	72097042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_1729.known	chr1	+	4004	19	FSM	ENSG00000116786.13	ENST00000375793.2	4004	19	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	20.6340842321331	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTCACTGGCCCTTTT	65	False	NA	21	True	AATAAA	-22	NA	15684389	15734769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15684619_15716236_15716344_15716706_15716817_15717892_15717993_15718537_15718626_15719733_15719921_15725316_15725546_15727013_15727833_15728078_15728149_15728266_15728358_15728668_15728734_15729101_15729191_15729796_15729930_15730531_15730723_15731191_15731258_15731888_15732049_15732349_15732530_15732611_15732729_15733796
transcript_17291.known	chr10	-	1816	8	FSM	ENSG00000138303.18	ENST00000317168.11	1816	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	56.9980307572471	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGGTCTATCATTTT	-16	True	NA	-11	True	ATTAAA	-17	NA	72216307	72096519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72097451_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_17306.nic	chr10	+	630	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-18	-320	combination_of_known_junctions	FALSE	canonical	3	149	junction_1	361.414197593595	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTTTTGTTTATTTG	280	False	NA	28	True	NA	NA	NA	72215981	72233295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_17314.known	chr10	+	3231	4	FSM	ENSG00000166295.9	ENST00000299381.5	3231	4	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	218.474000487218	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTCTCATTGATCAC	-17	True	NA	12	True	ATTAAA	-18	NA	72216011	72235860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72216139_72223887_72224057_72230365_72230441_72233000
transcript_1732.known	chr1	+	1443	6	FSM	ENSG00000162460.7	ENST00000375782.2	1443	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTTAGAATCACGAA	-16	True	NA	12	True	AATAAA	-18	NA	15742498	15747982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15742648_15742834_15742908_15743019_15743195_15744159_15744581_15746866_15747055_15747545
transcript_17328.known	chr10	+	3100	3	FSM	ENSG00000166295.9	ENST00000615507.4	3100	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	70	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTTTCTCATTGATC	-29	True	NA	10	True	ATTAAA	-16	NA	72215999	72235858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72216073_72223887_72224057_72233000
transcript_17331.known	chr10	+	734	3	FSM	ENSG00000166295.9	ENST00000478193.5	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	460.5	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTTAGACATCAATT	0	True	NA	NA	False	TTTAAA	-16	NA	72216028	72233615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72216073_72230365_72230441_72233000
transcript_17342.nnic	chr10	+	517	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-8	-320	combination_of_known_splicesites	FALSE	canonical	3	191	junction_1	406	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTTTTGTTTATTTG	-37	True	NA	28	True	NA	NA	NA	72215991	72233295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_17344.nnic	chr10	+	1051	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	191	junction_1	406	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGGCATTATCCTTTCA	-37	True	NA	21	True	AATAAA	-21	NA	72215991	72233829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_17346.nnic	chr10	+	374	2	NIC	ENSG00000166295.9	novel	734	3	NA	NA	-15	-13276	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGAGAAAAGAAAAC	-44	True	NA	NA	False	NA	NA	NA	72215984	72220339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_72216073_72220053
transcript_17348.known	chr10	+	101	1	FSM	ENSG00000200170.1	ENST00000363300.1	101	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACTCAGCT	4399	False	NA	23	True	NA	NA	NA	72220751	72220852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72220800_72220900
transcript_17349.known	chr10	+	1744	3	FSM	ENSG00000168209.6	ENST00000307365.4	1744	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	4.5	4480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	1	True	NA	16	True	AATAAA	-17	NA	72273923	72276036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72274061_72274156_72274422_72274694
transcript_17350.known	chr10	+	1830	2	FSM	ENSG00000168209.6	ENST00000473155.2	1830	2	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	0	3393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAACAGTTGGTTGAG	1	True	NA	6	True	AATAAA	-7	NA	72273923	72276026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72274422_72274694
transcript_17352.known	chr10	-	2369	8	FSM	ENSG00000148719.16	ENST00000461919.5	2369	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	59.6486310293327	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGAGCTGATTTCTTC	597	False	NA	NA	False	TTTAAA	-21	NA	72354380	72334080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72353341
transcript_17361.known	chr10	-	2488	12	NNC	ENSG00000107745.20	novel	2357	12	NA	NA	-60	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	85.9622250307157	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGGTCCTCTAGGCC	NA	False	NA	0	True	AATAAA	-27	NA	72626191	72367326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508272_72533741_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_17362.known	chr10	-	2357	12	FSM	ENSG00000107745.20	ENST00000361114.10	2357	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	22.4370561260453	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTCCTTTATTTTAG	-2	True	NA	-13	True	AATAAA	-14	NA	72626079	72367339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508270_72533745_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_17363.known	chr10	+	2949	8	FSM	ENSG00000156026.15	ENST00000373053.8	2937	8	-12	0	-12	0	multi-exon	FALSE	canonical	3	409	junction_7	45.9467304692763	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATAGCATCTCATTCTTTA	-9	True	NA	7	True	AATAAA	-20	NA	72692130	72887694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72692302_72834358_72834429_72859176_72859348_72860422_72860528_72868702_72868864_72871376_72871581_72884265_72884383_72885744
transcript_17364.known	chr10	-	1564	4	FSM	ENSG00000138308.6	ENST00000373032.4	1564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACCAGTAAATATG	-8	True	NA	NA	False	NA	NA	NA	72954806	72934761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72935739_72941168_72941335_72942651_72942741_72954474
transcript_17366.known	chr10	-	546	2	FSM	ENSG00000213700.3	ENST00000396131.2	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTCAGCATTAAAATAAA	1280	False	NA	NA	False	AAGAAA	-32	NA	73006595	73005832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73006150_73006366
transcript_17371.known	chr10	-	2844	15	FSM	ENSG00000122884.13	ENST00000263556.3	2844	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.0190415611415	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	364	False	NA	-22	True	NA	NA	NA	73096974	73007223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_17372.known	chr10	-	2743	15	FSM	ENSG00000122884.13	ENST00000394890.7	2743	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	75.4713420404577	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-2	True	NA	-15	True	TTTAAA	-5	NA	73096866	73007216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_1738.nic	chr1	+	3194	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_2	88.9747155095199	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	-17	True	NA	23	True	AATAAA	-21	NA	15758776	15786589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_17380.known	chr10	-	2790	14	FSM	ENSG00000122884.13	ENST00000440381.5	2790	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	59.2220772843187	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	364	False	NA	-22	True	NA	NA	NA	73096974	73007223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_17386.nic	chr10	-	1210	7	ISM	ENSG00000122884.13	ENST00000440381.5	2790	14	-141	43901	-141	-41485	5prime_fragment	FALSE	canonical	3	162	junction_1	18.4518893943743	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGCTGTGGATTACCT	-18	True	NA	NA	False	AAGAAA	-4	NA	73097115	73051124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_17388.nnic	chr10	-	924	6	NNC	ENSG00000122884.13	novel	2727	15	NA	NA	-47	-53519	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	83.27400554795	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTGGTATTTTGT	317	False	NA	NA	False	AATAAA	-20	NA	73097021	73063158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_73063332_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_1739.known	chr1	+	3314	9	FSM	ENSG00000162458.13	ENST00000375766.8	3314	9	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	52.8251833882288	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	1	True	NA	23	True	AATAAA	-21	NA	15758794	15786589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_17404.known	chr10	+	834	1	FSM	ENSG00000138286.15	ENST00000607940.1	834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGTGGTTTTACGGTC	NA	False	NA	22	True	AATAAA	-28	NA	73230472	73231306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73230500_73231300
transcript_17405.known	chr10	+	2101	9	FSM	ENSG00000166321.14	ENST00000357321.9	2101	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5.09748712602592	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTCTGATGTCTTTT	0	True	NA	NA	False	AATAAA	-14	NA	73110454	73131823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73125397_73125510_73126672_73126828_73130702
transcript_17406.known	chr10	+	365	3	FSM	ENSG00000166321.14	ENST00000469925.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATATATTTTTACT	7	True	NA	NA	False	AATAAA	-13	NA	73110519	73115168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73110568_73114356_73114449_73114943
transcript_17407.known	chr10	+	1919	8	FSM	ENSG00000166321.14	ENST00000372997.3	1919	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	4.74664220738176	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	17	False	NA	NA	False	AATAAA	-19	NA	73110529	73131828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73126672_73126828_73130702
transcript_17408.known	chr10	-	3006	14	FSM	ENSG00000122882.11	ENST00000372979.9	3006	14	0	0	0	0	multi-exon	TRUE	canonical	3	440	junction_8	31.7819866363985	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTTTACAGACAGCTC	-4	True	NA	-23	True	ATTAAA	-13	NA	73168008	73133667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73163732_73163951_73167865
transcript_17409.known	chr10	-	1679	12	FSM	ENSG00000122882.11	ENST00000484976.6	1679	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	188.404698928961	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTTAGATTACTCA	369	False	NA	-15	True	AATAAA	-22	NA	73167948	73134523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73156274_73156454_73156567_73156656_73160433_73160552_73167865
transcript_17410.known	chr10	-	2246	15	FSM	ENSG00000122882.11	ENST00000430082.6	2246	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	171.225772902687	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACATTTAGCTTCTCT	0	True	NA	-25	True	NA	NA	NA	73168064	73134582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73141386_73141486_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73163732_73163951_73167865
transcript_17411.known	chr10	-	2295	5	FSM	ENSG00000213551.7	ENST00000372950.6	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	11.7765657133139	1224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCTGCATTCATGAAT	25	True	NA	0	True	AATAAA	-19	NA	73247255	73241953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009
transcript_17412.known	chr10	+	1835	7	FSM	ENSG00000166321.14	ENST00000349051.9	1835	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5.49747416749021	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	4	True	NA	NA	False	AATAAA	-19	NA	73110458	73131828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73130702
transcript_17420.known	chr10	+	548	3	FSM	ENSG00000227540.1	ENST00000457758.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGTTCACATTATTA	219	False	NA	14	True	ATTAAA	-20	NA	73253031	73254344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73253064_73253190_73253255_73253892
transcript_17426.known	chr10	-	612	3	FSM	ENSG00000182180.14	ENST00000473427.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	606.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGCCCTTGCTCTTCT	-8	True	NA	-19	True	AATAAA	-11	NA	73252634	73250743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73250992_73251762_73252024_73252531
transcript_17428.known	chr10	+	762	2	FSM	ENSG00000227540.1	ENST00000457147.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	9	True	NA	19	True	ATTAAA	-25	NA	73252790	73254349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73253096_73253892
transcript_17430.known	chr10	+	635	2	FSM	ENSG00000227540.1	ENST00000394864.2	635	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	356	False	NA	19	True	ATTAAA	-25	NA	73253168	73254349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73253255_73253800
transcript_17431.known	chr10	-	658	3	FSM	ENSG00000182180.14	ENST00000471251.5	658	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	609	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCCTTGCTCTTCTGGC	-8	True	NA	-16	True	AATAAA	-14	NA	73252404	73250740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73250992_73251762_73252024_73252258
transcript_17432.known	chr10	-	866	3	FSM	ENSG00000182180.14	ENST00000372940.3	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	675.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTACATAATTTGGCTA	NA	False	NA	-120	True	AAAAAG	-3	NA	73252693	73248937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73249319_73251762_73252024_73252469
transcript_17441.nic	chr10	-	2067	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_11	260.379252959795	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-25	True	NA	-26	True	AATAAA	-13	NA	73414081	73375444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_1745.nnic	chr1	+	1743	8	NNC	ENSG00000162458.13	novel	3314	9	NA	NA	-7	1666	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_7	142.308231150068	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGATGAGATGGGTCC	-17	True	NA	53	True	AAAAAG	-23	NA	15758776	15776908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15776337
transcript_17450.known	chr10	-	2443	13	FSM	ENSG00000138279.16	ENST00000372921.10	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_12	122.406767242121	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTCTGTGTCTGGCT	-2	True	NA	-7	True	TATAAA	-13	NA	73414058	73375100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_17451.known	chr10	-	2174	14	FSM	ENSG00000138279.16	ENST00000372919.8	2174	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	340.764334050597	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-11	True	NA	-26	True	AATAAA	-13	NA	73414067	73375444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396043_73396110_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_17452.known	chr10	-	438	1	FSM	ENSG00000229659.1	ENST00000440913.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	292	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	43	False	NA	NA	False	AATACA	-33	NA	73422696	73422258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73422300_73422700
transcript_17456.known	chr10	+	2394	5	FSM	ENSG00000221817.11	ENST00000422977.2	2394	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.58113883008419	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCTGTCTCTACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	73495524	73505691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73495818_73496141_73496907_73499594_73499688_73504183_73504273_73504537
transcript_17457.known	chr10	-	3119	13	FSM	ENSG00000107758.16	ENST00000394828.6	3119	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	21.2895057611856	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	-24	True	NA	-5	True	AATAAA	-25	NA	73496024	73436805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73438421_73444724_73444823_73446491_73446577_73454411_73454490_73467552_73467679_73470686_73470782_73470886_73470965_73471069_73471210_73471467_73471614_73474918_73475031_73478498_73478624_73479316_73479518_73495804
transcript_17459.nnic	chr10	-	1502	7	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3526	0	multi-exon	FALSE	canonical	3	26	junction_5	3.43592135468138	86	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	8588	False	NA	32	True	AATGAA	-43	NA	73647503	73631611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410_73641513_73647339
transcript_17463.nnic	chr10	-	1388	6	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3538	0	multi-exon	FALSE	canonical	3	11	junction_5	9.09065454189081	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	8600	False	NA	32	True	AATGAA	-43	NA	73647491	73631611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73647339
transcript_17464.known	chr10	-	1300	6	FSM	ENSG00000177791.12	ENST00000359322.5	1300	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	3.61109401705356	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-8	True	NA	32	True	AATGAA	-43	NA	73641474	73631611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410
transcript_17468.known	chr10	-	1716	10	FSM	ENSG00000242338.6	ENST00000584747.5	1716	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.0817815337941	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACAGTGAAATAGATGT	23	True	NA	NA	False	AATAAA	-18	NA	73730469	73715842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73716181_73718014_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73725960_73726041_73727292_73727483_73728378_73728588_73730315
transcript_17474.nic	chr10	-	1719	4	ISM	ENSG00000242338.6	ENST00000584747.5	1716	10	-37	9069	-37	-7797	5prime_fragment	FALSE	canonical	0	0	junction_3	40.4062701404951	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAAAATAAGCCATA	-14	True	NA	NA	False	NA	NA	NA	73730506	73724911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730315
transcript_17475.nic	chr10	-	1604	4	ISM	ENSG00000242288.9	ENST00000399449.3	3810	19	-48	50617	-48	-50617	5prime_fragment	FALSE	canonical	3	17	junction_3	33.1092467782374	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAAAATAAGCCATA	-22	True	NA	NA	False	NA	NA	NA	73730514	73724911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730438
transcript_17476.nic	chr10	-	1586	4	ISM	ENSG00000271816.1	ENST00000580790.1	1913	12	-29	25761	-29	-25761	5prime_fragment	FALSE	canonical	3	16	junction_3	33.5294232312789	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAAAATAAGCCATA	-24	True	NA	NA	False	NA	NA	NA	73730516	73724911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730458
transcript_17477.nic	chr10	-	1406	4	ISM	ENSG00000242338.6	ENST00000584747.5	1716	10	-37	9382	-37	-8110	5prime_fragment	FALSE	canonical	0	0	junction_3	40.4062701404951	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	-14	True	NA	NA	False	AATAAA	-25	NA	73730506	73725224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730315
transcript_17478.nic	chr10	-	1291	4	ISM	ENSG00000242288.9	ENST00000399449.3	3810	19	-48	50930	-48	-50930	5prime_fragment	FALSE	canonical	3	17	junction_3	33.1092467782374	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	-22	True	NA	NA	False	AATAAA	-25	NA	73730514	73725224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730438
transcript_17479.nic	chr10	-	1273	4	ISM	ENSG00000271816.1	ENST00000580790.1	1913	12	-29	26074	-29	-26074	5prime_fragment	FALSE	canonical	3	16	junction_3	33.5294232312789	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	-24	True	NA	NA	False	AATAAA	-25	NA	73730516	73725224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730458
transcript_17481.known	chr10	-	1913	12	FSM	ENSG00000271816.1	ENST00000580790.1	1913	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.1395577567204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAATTACCCAACCTC	5	True	NA	NA	False	ATTAAA	-10	NA	73730487	73699150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73699589_73704985_73705079_73713203_73713333_73718014_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73725960_73726041_73727292_73727483_73728378_73728588_73730458
transcript_17482.nnic	chr10	+	921	3	FSM	ENSG00000250959.3	ENST00000686626.1	897	3	-30	6	-7	-6	multi-exon	FALSE	canonical	2	4	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCACTCTTTGGGTCCGC	NA	False	NA	10	True	AATAAA	-10	NA	73730554	73737781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73730874_73731187_73731256_73737247
transcript_17489.known	chr10	-	1236	1	FSM	ENSG00000279088.1	ENST00000625041.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	355	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAATAATAAAACTCT	82	False	NA	-34	True	NA	NA	NA	73744230	73742994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73743000_73744200
transcript_17490.known	chr10	+	4513	24	FSM	ENSG00000176986.16	ENST00000339365.2	4513	24	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	130.620881733364	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	1	True	NA	16	True	AATAAA	-17	NA	73744390	73772161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73744438_73746629_73746717_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_17492.known	chr10	+	4445	23	FSM	ENSG00000176986.16	ENST00000345254.9	4445	23	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_12	47.1211073758945	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-18	True	NA	16	True	AATAAA	-17	NA	73744371	73772161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_17496.nnic	chr10	+	2437	10	NIC	ENSG00000176986.16	novel	4445	23	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	19	junction_2	168.759380169109	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-19	True	NA	16	True	AATAAA	-17	NA	73744370	73772161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_73744438_73746804_73747005_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_17498.nnic	chr10	+	2237	9	NIC	ENSG00000176986.16	novel	4445	23	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	182.420145200578	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	-19	True	NA	16	True	AATAAA	-17	NA	73744370	73772161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_73744438_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_17507.known	chr10	+	850	3	FSM	ENSG00000172586.8	ENST00000372833.6	850	3	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	118.5	9638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCAGATATGTTT	-11	True	NA	8	True	AATAAA	-21	NA	73782047	73783652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73782200_73782322_73782442_73783073
transcript_17508.known	chr10	+	1202	2	FSM	ENSG00000172586.8	ENST00000372837.3	1202	2	0	0	0	0	multi-exon	FALSE	canonical	3	1284	junction_1	0	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCCTTTTGTTGTGA	-12	True	NA	15	True	AATAAA	-14	NA	73782046	73783371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73782200_73782322
transcript_17509.nic	chr10	-	1128	5	ISM	ENSG00000166507.19	ENST00000299641.8	3535	13	5075	5	-312	0	3prime_fragment	FALSE	canonical	3	77	junction_1	4.71036092035419	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTCTGCCTCCCTGG	8177	False	NA	-6	True	AATAAA	-15	NA	73803656	73801915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73802577_73802673_73802777_73802971_73803082_73803188_73803360_73803573
transcript_17513.known	chr10	-	3563	19	FSM	ENSG00000148660.21	ENST00000351293.7	3563	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	17.5657495016739	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	16	True	NA	-1	True	AATAAA	-18	NA	73874519	73812500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_17517.known	chr10	-	1618	18	FSM	ENSG00000148660.21	ENST00000433289.5	1618	18	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	11.448092571665	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCCATACCATGATGCG	NA	False	NA	NA	False	AAAAAG	-26	NA	73860854	73814261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829
transcript_17526.nnic	chr10	-	3862	10	NIC	ENSG00000185009.13	novel	2320	10	NA	NA	-9	1198	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	140.74808947676	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGATTTTTTTTAGGT	477	False	NA	-13	True	AATAAA	-14	NA	74150766	74121765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150334
transcript_17527.known	chr10	-	2320	10	FSM	ENSG00000185009.13	ENST00000372745.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	122.278774795269	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-26	True	NA	-14	True	ATTAAA	-10	NA	74150842	74122963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150754
transcript_1753.nnic	chr1	-	1158	2	Genic_Genomic	ENSG00000233954.6	novel	2180	1	NA	NA	-19401	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGGTAC	7109	False	NA	NA	False	AATAAA	-31	NA	15828749	15807168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_15807789_15828211
transcript_17532.nic	chr10	-	3739	9	NIC	ENSG00000185009.13	novel	4889	9	NA	NA	-12	1198	combination_of_known_junctions	FALSE	canonical	3	28	junction_8	112.033198204818	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGATTTTTTTTAGGT	474	False	NA	-13	True	AATAAA	-14	NA	74150769	74121765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150334
transcript_17533.known	chr10	-	4889	9	FSM	ENSG00000185009.13	ENST00000355264.9	4889	9	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_8	90.1622669136042	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGGATTAGTTTCATT	-12	True	NA	-5	True	AATAAA	-18	NA	74150828	74120254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150754
transcript_1754.nnic	chr1	-	1214	2	Genic_Genomic	ENSG00000233954.6	novel	2180	1	NA	NA	-19416	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	11132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCCGGGTGTGGTGGTA	7094	False	NA	NA	False	AATAAA	-30	NA	15828764	15807169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_15807831_15828211
transcript_17542.known	chr10	-	550	2	FSM	ENSG00000185009.13	ENST00000487653.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAATGTACCACCTGTC	486	False	NA	NA	False	NA	NA	NA	74150757	74138255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_74138383_74150334
transcript_17549.known	chr10	+	1992	11	FSM	ENSG00000156110.15	ENST00000539909.6	1992	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	86.7179912128965	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	-1	True	NA	10	True	AATAAA	-19	NA	74151220	74709290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_1756.known	chr1	-	2720	16	FSM	ENSG00000116809.12	ENST00000375743.9	2720	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	10.0456734744643	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-11	True	NA	-3	True	AATAAA	-17	NA	15976101	15941868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_17561.known	chr10	+	2494	10	FSM	ENSG00000156110.15	ENST00000673352.1	2494	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	161.630885692916	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTGAGGCAAGATCAC	5	False	NA	NA	False	NA	NA	NA	74151239	74709926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74670182_74670270_74708320
transcript_17566.known	chr10	+	1249	10	FSM	ENSG00000156110.15	ENST00000672429.1	1249	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	157.143953820127	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAATTTTTATTTCAT	NA	False	NA	7	True	ATTAAA	-18	NA	74151201	74708699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_17583.known	chr10	+	1993	11	FSM	ENSG00000156110.15	ENST00000372734.5	1993	11	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	58.5050425177181	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	2	True	NA	10	True	AATAAA	-19	NA	74176762	74709290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_17584.known	chr10	+	3212	12	FSM	ENSG00000156110.15	ENST00000673310.1	3212	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	186.471188477554	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAATAGAGTGAGACTC	-3	True	NA	NA	False	NA	NA	NA	74176550	74709963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74527759_74528094_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_17585.known	chr10	+	1188	10	FSM	ENSG00000156110.15	ENST00000673027.1	1188	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.343974812614	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTCCTACTATAATAAT	2	True	NA	NA	False	AATAAA	-19	NA	74176762	74708539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74176887_74200763_74200839_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_17587.known	chr10	+	877	3	FSM	ENSG00000156650.14	ENST00000648828.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGGTTGGATAAGAAG	-4	True	NA	NA	False	NA	NA	NA	74824926	74842972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74825361_74838682_74838753_74842599
transcript_17589.known	chr10	+	7297	18	FSM	ENSG00000156650.14	ENST00000372711.2	7297	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.4213879889849	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTAGCCTCTTGTGTC	458	False	NA	10	True	AATAAA	-12	NA	74827057	75032285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74827115_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74975782_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
transcript_17592.nic	chr10	+	1483	6	NIC	ENSG00000156671.15	novel	6906	6	NA	NA	-25	-3180	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	26.1120661763867	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAACTTTGCGTTCTCC	-6	True	NA	19	True	ATTAAA	-21	NA	75111609	75176743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_75111779_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_17595.known	chr10	+	6761	6	FSM	ENSG00000156671.15	ENST00000542569.6	6761	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	24.1876001289917	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTCTTATTGAAAT	1	True	NA	NA	False	AATAAA	-17	NA	75111655	75182123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_75111723_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_17598.nnic	chr10	-	1294	6	NNC	ENSG00000079393.21	novel	1129	6	NA	NA	2545	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	4.85798312059645	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	2643	False	NA	NA	False	AATAAA	-18	NA	75106554	75094435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75103893_75104098_75106397
transcript_17601.nnic	chr10	-	1096	5	NNC	ENSG00000079393.21	novel	1110	5	NA	NA	2539	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	4.60298815988049	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	2637	False	NA	NA	False	AATAAA	-18	NA	75106560	75094435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75106397
transcript_17603.nnic	chr10	-	948	4	NNC	ENSG00000079393.21	novel	1320	4	NA	NA	2592	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.0184900284226	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	2690	False	NA	NA	False	AATAAA	-18	NA	75106507	75094435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75106397
transcript_1762.nnic	chr1	-	464	3	NNC	ENSG00000116809.12	novel	2720	16	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	33.5	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	1	True	NA	-3	True	AATAAA	-17	NA	15976118	15941868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_15942155_15973083_15973126_15975982
transcript_1763.nic	chr1	-	1375	2	ISM	ENSG00000116809.12	ENST00000479282.5	1054	5	-14	26041	14	-25954	5prime_fragment	FALSE	canonical	3	69	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGACTATTAATTTTCC	1	True	NA	21	True	NA	NA	NA	15976118	15971886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_15973126_15975982
transcript_17630.known	chr10	+	1557	10	FSM	ENSG00000165637.14	ENST00000332211.11	1512	10	-45	0	-24	0	multi-exon	FALSE	canonical	3	2595	junction_4	163.671079370249	9844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTCCAAGTATTTG	125	False	NA	14	True	AATAAA	-15	NA	75210750	75231448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_17631.known	chr10	+	1424	10	FSM	ENSG00000165637.14	ENST00000543351.5	1424	10	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_1	898.449404993589	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAATGGCTCCAAGTA	-14	True	NA	10	True	AATAAA	-11	NA	75210153	75231444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_75210213_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_17632.known	chr10	+	1467	11	FSM	ENSG00000165637.14	ENST00000313132.8	1467	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1144.66866821801	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGTGTGCATGTTTGTT	38	False	NA	5	True	AATAGA	-18	NA	75210847	75231277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_75210939_75211133_75211190_75211481_75211660_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_17633.known	chr10	-	1250	7	FSM	ENSG00000165644.11	ENST00000372538.8	1250	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	27.4752413799932	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGGGTGTCACTTGTGTG	-2	True	NA	NA	False	NA	NA	NA	75235957	75233640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235615_75235744_75235834
transcript_17636.known	chr10	-	1094	4	FSM	ENSG00000165644.11	ENST00000460899.5	1094	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0.942809041582063	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGAGCCTCCGTGTGT	304	False	NA	-9	True	AATAAA	-20	NA	75235730	75233970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75235179_75235266
transcript_17637.known	chr10	-	539	4	FSM	ENSG00000165644.11	ENST00000494596.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.2440191206499	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGACCTCCTGAGCCTC	19	True	NA	-16	True	AATAAA	-13	NA	75235936	75233977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235834
transcript_17640.known	chr10	-	354	1	FSM	ENSG00000273248.1	ENST00000609182.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCGAAACATGTTGGGTTAT	275	False	NA	NA	False	AATAAA	-21	NA	75409326	75408972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75409000_75409300
transcript_17642.nnic	chr10	+	382	2	NNC	ENSG00000148655.15	novel	393	3	NA	NA	-33393	132	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCGTGGGCAGACAAAGCA	NA	False	NA	9	True	ATTAAA	-15	NA	76002612	76036268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_76002734_76036007
transcript_17643.known	chr10	+	393	3	FSM	ENSG00000148655.15	ENST00000611306.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTACTTGCTGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	76036005	76058789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_76036135_76047163_76047304_76058665
transcript_17646.known	chr10	-	2963	2	FSM	ENSG00000156113.24	ENST00000480683.2	2963	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACCTCTCTGGTGTCTA	1082	False	NA	-10	True	AATAAA	-22	NA	77637821	77634109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_77636516_77637264
transcript_17647.known	chr10	-	896	2	FSM	ENSG00000156113.24	ENST00000481070.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGCCAGCTGCCTT	1114	False	NA	NA	False	AATAAA	-21	NA	77637789	77636198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_77636570_77637264
transcript_17648.known	chr10	-	3167	17	FSM	ENSG00000151208.17	ENST00000459739.5	3167	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	56.5540394224851	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAAACAATGCTGTC	NA	False	NA	NA	False	AAAACA	-11	NA	77821538	77793543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_77794118_77794848_77794959_77796060_77796189_77796450_77796595_77805664_77805862_77806757_77806929_77807795_77807937_77809546_77809731_77811093_77811235_77811923_77812058_77812214_77812378_77816550_77816702_77817006_77817097_77817776_77817890_77819320_77819466_77819894_77820019_77821081
transcript_17650.nnic	chr10	+	463	2	NNC	ENSG00000233871.2	novel	487	2	NA	NA	-1320	1	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGTTCTTGTTTTAA	NA	False	NA	11	True	AATAAA	-15	NA	77926051	77929825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_77926278_77929588
transcript_17651.known	chr10	+	487	2	FSM	ENSG00000233871.2	ENST00000449852.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGGTTCTTGTTTTA	NA	False	NA	10	True	AATAAA	-14	NA	77927371	77929824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_77927623_77929588
transcript_17652.known	chr10	-	6610	31	FSM	ENSG00000148606.14	ENST00000372371.8	6610	31	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_18	24.2502004573616	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATGAATAGTTACAAATT	-9	True	NA	-30	True	AATAAA	-23	NA	78029515	77975148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_77977627_77980140_77980274_77981427_77981560_77982153_77982319_77982652_77982818_77983919_77984013_77984204_77984299_77985169_77985341_77985902_77985986_77986072_77986160_77991053_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
transcript_17654.nic	chr10	-	529	2	ISM	ENSG00000148606.14	ENST00000372371.8	6610	31	-43	50747	-43	-12810	5prime_fragment	FALSE	canonical	3	198	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAGGAAGTGATCTCAG	7739	False	NA	NA	False	AAGAAA	-6	NA	78029558	78025895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_78026230_78029363
transcript_1766.known	chr1	+	1777	14	FSM	ENSG00000184908.20	ENST00000684624.1	1777	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.64059541036247	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTGTCTGGTTCCCAGT	9	True	NA	-38	True	NA	NA	NA	16048999	16057252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16049032_16049119_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055674_16055759_16056421_16056509_16056868
transcript_1767.nic	chr1	+	1837	14	NIC	ENSG00000184908.20	novel	1777	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	7.56353757125037	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTCCATCCCTCAT	1	True	NA	17	True	AATAAA	-13	NA	16048991	16057307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_16049032_16049119_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
transcript_1769.known	chr1	+	2129	13	FSM	ENSG00000184908.20	ENST00000375667.7	2129	13	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_9	5.67646212197547	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCCATCCCTCATC	5	False	NA	18	True	AATAAA	-14	NA	16048788	16057308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
transcript_17692.known	chr10	+	539	5	FSM	ENSG00000138326.21	ENST00000482069.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5095.61463417319	6053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	28	False	NA	13	True	AATAAA	-12	NA	78033916	78040696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033987_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_1770.known	chr1	+	2058	13	FSM	ENSG00000184908.20	ENST00000683606.1	2058	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.45042733962148	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGTCCATCCCTCAT	5	True	NA	17	True	AATAAA	-13	NA	16048849	16057307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052206_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
transcript_17701.known	chr10	+	2146	1	FSM	ENSG00000138326.21	ENST00000480662.2	2146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	629	False	NA	18	True	AATAAA	-17	NA	78038555	78040701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78038600_78040700
transcript_17702.known	chr10	+	634	5	FSM	ENSG00000138326.21	ENST00000613865.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_4	2889.48874154235	98500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	NA	False	NA	33	True	AATAAA	-32	NA	78033759	78040716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_17703.known	chr10	+	534	6	FSM	ENSG00000138326.21	ENST00000372360.9	534	6	0	0	0	0	multi-exon	FALSE	canonical	3	3781	junction_4	3716.40794316232	67055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTTGTTTGAAAT	-1	True	NA	14	True	AATAAA	-13	NA	78033862	78040697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040203_78040226_78040614
transcript_17704.known	chr10	+	583	7	FSM	ENSG00000138326.21	ENST00000645440.1	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	5092.23546195578	5152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	-1	True	NA	18	True	AATAAA	-17	NA	78033835	78040701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037964_78037983_78040203_78040226_78040614
transcript_17705.known	chr10	+	714	4	FSM	ENSG00000138326.21	ENST00000475468.6	714	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5687.028886471	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTCAAGAAAGCAACGAAAG	15	False	NA	-23	True	AAAAAG	-2	NA	78033903	78037218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78034317_78035351_78035418_78035510_78035721_78037193
transcript_17706.known	chr10	+	3307	6	FSM	ENSG00000138326.21	ENST00000645698.1	3307	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4766.10866011257	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	10	False	NA	33	True	AATAAA	-32	NA	78033873	78040716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037438_78040226_78040614
transcript_17707.known	chr10	+	2196	6	FSM	ENSG00000108179.14	ENST00000225174.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	20.9322717352895	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAGTCTCAAGTATTT	-2	True	NA	NA	False	AATAAA	-1	NA	79347468	79355334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353706
transcript_17710.known	chr10	-	993	7	FSM	ENSG00000225484.7	ENST00000670682.1	993	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	63.9678738812608	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGGTGTGGTGGCTCA	297	False	NA	-27	True	AATAAA	-13	NA	79826282	79691503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_79692057_79766270_79766325_79804484_79804528_79806038_79806123_79808762_79808833_79814612_79814717_79826197
transcript_17714.known	chr10	-	716	6	FSM	ENSG00000225484.7	ENST00000496359.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	48.5962961551598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATGGTTCTATCTGGC	291	False	NA	NA	False	GATAAA	-14	NA	79826288	79797707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_17716.known	chr10	-	7611	6	FSM	ENSG00000225484.7	ENST00000619625.4	7611	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	70.129594323652	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCGCTATTGTTTAAAATT	280	False	NA	NA	False	AATAAA	-18	NA	79826299	79716444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_79723655_79723914_79724013_79766270_79766325_79804484_79804528_79814612_79814717_79826197
transcript_17718.nnic	chr10	-	1567	9	Fusion	ENSG00000133661.17_ENSG00000229616.2	novel	1283	8	NA	NA	-879	0	multi-exon	FALSE	canonical	0	0	junction_7	2.80345768650073	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTCTCCAGAATGTG	NA	False	NA	1	True	AATAAA	-24	NA	80018790	79937739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_79938229_79940704_79940789_79941397_79941515_79941953_79942071_79942387_79942505_79942762_79942880_79946460_79946663_80017720_80017876_80018621
transcript_17725.known	chr10	-	3121	6	FSM	ENSG00000230091.6	ENST00000412298.5	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.22374241638857	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTTTTATTCTCGC	99	False	NA	NA	False	AATACA	-19	NA	80078895	80046859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80049179_80053395_80053587_80055915_80056127_80056318_80056406_80060789_80060934_80078726
transcript_17728.known	chr10	+	860	5	FSM	ENSG00000133678.14	ENST00000372275.5	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	202.43887966495	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCTGCACTAAGATAAAG	3	True	NA	NA	False	NA	NA	NA	80078681	80091335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_17732.known	chr10	+	2154	5	FSM	ENSG00000133678.14	ENST00000613758.4	2154	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	211.595723019157	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAATGCTTTTCTTGTA	NA	False	NA	25	True	AATAAA	-19	NA	80078645	80092550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80078787_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_17734.known	chr10	+	847	5	FSM	ENSG00000133678.14	ENST00000463029.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	209.078932463316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTGACACTTCCACTA	0	True	NA	NA	False	NA	NA	NA	80079272	80091349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079308_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_17738.known	chr10	+	785	5	FSM	ENSG00000133678.14	ENST00000476173.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	191.108607864743	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACACTTCCACTATAT	22	False	NA	NA	False	NA	NA	NA	80079294	80091352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_17739.known	chr10	+	878	5	FSM	ENSG00000133678.14	ENST00000483732.5	878	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	211.850625441607	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTTAGTCAGTTTTTTC	55	False	NA	NA	False	NA	NA	NA	80079327	80091050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079693_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_17740.known	chr10	-	2189	5	FSM	ENSG00000230091.6	ENST00000432070.2	2189	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.76085931090146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	82	False	NA	NA	False	NA	NA	NA	80078912	80047721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80049179_80053395_80053587_80055915_80056127_80060789_80060934_80078726
transcript_17745.known	chr10	+	2041	4	FSM	ENSG00000133678.14	ENST00000372281.8	2041	4	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	33.6683167912439	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGCTTTTCTTGTAT	-14	True	NA	26	True	AATAAA	-20	NA	80078664	80092551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090796
transcript_17748.known	chr10	+	2074	4	FSM	ENSG00000133678.14	ENST00000372273.7	2074	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	200.902961650644	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	357	False	NA	32	True	AATAAA	-26	NA	80079035	80092557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079185_80081840_80081945_80082144_80082205_80090796
transcript_17750.known	chr10	+	1963	4	FSM	ENSG00000133678.14	ENST00000467529.5	1963	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	196.224927627002	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	-3	True	NA	32	True	AATAAA	-26	NA	80079269	80092557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090796
transcript_17755.known	chr10	+	481	6	FSM	ENSG00000133678.14	ENST00000372274.5	481	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	200.015599391647	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTTACATTCATCCTC	13	True	NA	NA	False	AAAACA	-29	NA	80078691	80090938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80086230_80086259_80090379_80090432_80090796
transcript_17756.known	chr10	+	534	4	FSM	ENSG00000189129.14	ENST00000372270.6	534	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	95.030989097709	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGCCTCCTCTCACTCC	13	False	NA	47	True	NA	NA	NA	80131681	80145064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80131832_80142081_80142180_80144222_80144344_80144899
transcript_17759.known	chr10	+	776	4	FSM	ENSG00000189129.14	ENST00000372263.4	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.4419672692682	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTATGAAGTGAAAT	0	True	NA	20	True	ATTAAA	-25	NA	80132729	80145359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80132827_80142081_80142180_80144222_80144344_80144899
transcript_17763.known	chr10	-	6734	16	FSM	ENSG00000122359.18	ENST00000422982.8	6734	16	0	0	0	0	multi-exon	TRUE	canonical	3	234	junction_15	78.1723452095148	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	-2	True	NA	-3	True	AATAAA	-18	NA	80205537	80150888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80176106_80176156_80205342
transcript_17764.known	chr10	-	6720	15	FSM	ENSG00000122359.18	ENST00000372231.7	6720	15	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_14	64.3610669487036	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	1	True	NA	-3	True	AATAAA	-18	NA	80205572	80150888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80205342
transcript_17765.known	chr10	-	3384	9	FSM	ENSG00000151224.13	ENST00000372213.8	3384	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	3.78937659780603	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTAGTTATTCTC	-3	True	NA	-1	True	AATAAA	-18	NA	80289658	80271819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80273884_80274519_80274654_80275016_80275200_80276375_80276595_80280172_80280317_80280679_80280793_80283915_80284039_80285511_80285590_80289332
transcript_17768.known	chr10	-	638	7	FSM	ENSG00000170788.14	ENST00000372202.6	638	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGAGGTTCCCAATTTGT	-1	True	NA	NA	False	AATAAA	-27	NA	80356755	80336104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80336186_80338466_80338572_80339096_80339154_80342268_80342362_80351900_80352003_80352454_80352611_80356711
transcript_17777.known	chr10	+	1863	5	FSM	ENSG00000133665.13	ENST00000256039.3	1863	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.8535710713571	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTGTGACTGGCT	-4	True	NA	7	True	TATAAA	-18	NA	80356780	80368073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80356826_80357892_80358046_80362434_80362591_80362950_80363074_80366687
transcript_17781.known	chr10	+	1173	4	FSM	ENSG00000133665.13	ENST00000444807.6	1173	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.5472369909914	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAGAGAAAAGACAA	NA	False	NA	NA	False	GGGGCT	-19	NA	80356296	80367281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80356597_80362434_80362591_80362950_80363074_80366687
transcript_17782.known	chr10	+	439	4	FSM	ENSG00000133665.13	ENST00000411538.5	439	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.93025150224688	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTGATTCCAGGAATGC	142	False	NA	NA	False	NA	NA	NA	80356772	80366794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80356826_80362434_80362591_80362950_80363074_80366687
transcript_178.known	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2454	junction_4	247.395432455816	7267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
transcript_17806.known	chr10	+	5801	6	FSM	ENSG00000122378.14	ENST00000606162.6	5801	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	89.1008417468657	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGATT	25	True	NA	11	True	AATAAA	-25	NA	80408550	80437115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80408644_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_17807.known	chr10	+	1647	6	FSM	ENSG00000122378.14	ENST00000372187.9	1647	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	231.898771018736	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTATGTATAAGATTTT	-15	True	NA	28	True	AATAAA	-18	NA	80413818	80432996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80413877_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_17808.known	chr10	+	855	9	FSM	ENSG00000108219.15	ENST00000372157.6	855	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	86.9482604771366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGGACGCTGATCTCAGA	8	True	NA	NA	False	NA	NA	NA	80454321	80517922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507198_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_17809.known	chr10	+	16183	9	FSM	ENSG00000108219.15	ENST00000429989.7	16183	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	32.124756808418	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTGTCATTTTTCTCC	12	False	NA	NA	False	TATAAA	-16	NA	80454165	80533123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_17811.known	chr10	+	16221	11	FSM	ENSG00000108219.15	ENST00000372158.6	16221	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	110.423910454213	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTCATTTTTCTCCG	-4	True	NA	NA	False	TATAAA	-17	NA	80454309	80533124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80454372_80463087_80463128_80468546_80468688_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_17814.known	chr10	+	959	5	FSM	ENSG00000108219.15	ENST00000469149.1	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	41.8710819062512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCTGTTTAAGAAGCCA	15	True	NA	NA	False	NA	NA	NA	80454328	80509920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80509300
transcript_17822.known	chr10	+	1724	5	FSM	ENSG00000229404.6	ENST00000653603.1	1724	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	4.38748219369606	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTCTCTCTCATGGTA	NA	False	NA	NA	False	AATAAA	-21	NA	84279967	84290616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_84280066_84288223_84288421_84288593_84288697_84288816_84289045_84289518
transcript_17828.nnic	chr10	-	1193	2	Antisense	novelGene_ENSG00000178429.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5734	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAATTTACCAAAA	NA	False	NA	NA	False	NA	NA	NA	84561306	84560079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_-_84560917_84560950
transcript_17830.known	chr10	+	821	1	FSM	ENSG00000178429.9	ENST00000389400.4	821	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGACTTCAAATAGTG	26	False	NA	NA	False	NA	NA	NA	84560442	84561263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_84560400_84561300
transcript_1784.nic	chr1	-	1988	10	ISM	ENSG00000142632.17	ENST00000270747.8	3322	16	6079	250	-30	-250	3prime_fragment	FALSE	canonical	3	177	junction_9	34.5728788303387	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	6066	False	NA	-7	True	AATAAA	-17	NA	16206573	16198103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179
transcript_17841.nnic	chr10	+	1150	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-2556	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10.3846039885977	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	278	False	NA	7	True	AATAAA	-17	NA	86956042	86963258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_86956426_86958587_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_17847.known	chr10	+	357	3	FSM	ENSG00000188100.9	ENST00000343959.5	357	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGCGCTGGATTTATA	0	True	NA	NA	False	AATAAA	-18	NA	87020293	87024730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87020398_87022313_87022377_87024540
transcript_17850.known	chr10	+	756	5	FSM	ENSG00000173267.14	ENST00000372017.4	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	7.79021822544144	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	4	True	NA	7	True	AATAAA	-17	NA	86958598	86963258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_17851.known	chr10	+	794	4	FSM	ENSG00000173267.14	ENST00000483064.1	794	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	7.58653778449403	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	-20	True	NA	7	True	AATAAA	-17	NA	86959374	86963258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_86959675_86960000_86960129_86962603_86962676_86962964
transcript_17852.known	chr10	-	3300	13	FSM	ENSG00000148672.10	ENST00000277865.5	3300	13	0	0	0	0	multi-exon	TRUE	canonical	3	620	junction_10	44.1122306043221	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGAGAAAGAGGCTCT	-24	True	NA	NA	False	ATTAAA	-15	NA	87094843	87050201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87060687_87060826_87060914_87061053_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87094324
transcript_17858.known	chr10	+	3601	10	FSM	ENSG00000122376.12	ENST00000298786.5	3601	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	43.3564041149376	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	7	True	NA	15	True	AATAAA	-17	NA	87095205	87191465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_1786.nic	chr1	-	1858	9	NIC	ENSG00000142632.17	novel	3322	16	NA	NA	-30	-250	intron_retention	FALSE	canonical	3	5	junction_7	81.2680749126002	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	6066	False	NA	-7	True	AATAAA	-17	NA	16206573	16198103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205930_16206084_16206179
transcript_17861.known	chr10	+	3402	9	FSM	ENSG00000122376.12	ENST00000298784.5	3402	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	61.3066064955483	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	-3	True	NA	13	True	AATAAA	-15	NA	87095195	87191463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
transcript_17863.nnic	chr10	+	1895	8	NIC	ENSG00000122376.12	novel	3601	10	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	96.0442075084092	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	-24	True	NA	15	True	AATAAA	-17	NA	87095174	87191465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_87095249_87096933_87096990_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
transcript_17864.nnic	chr10	+	2224	8	NNC	ENSG00000122376.12	novel	3402	9	NA	NA	61802	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	90.0680015208464	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	NA	False	NA	15	True	AATAAA	-17	NA	87157007	87191465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_87157260_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_17869.nnic	chr10	+	912	3	NNC	ENSG00000122376.12	novel	3402	9	NA	NA	-21	-13248	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	95.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTGTTAACCTAGATTT	-24	True	NA	NA	False	CATAAA	-24	NA	87095174	87138386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_87095249_87096933_87096990_87137604
transcript_17870.known	chr10	-	2759	14	FSM	ENSG00000148672.10	ENST00000684032.1	2759	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	249.253465253401	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATAAAAGCAGTTATTAAA	988	False	NA	-43	True	NA	NA	NA	87094397	87050523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87060687_87060826_87060914_87061053_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87089561_87089789_87094324
transcript_17875.known	chr10	-	511	5	FSM	ENSG00000223482.9	ENST00000663644.1	511	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	114.257111376054	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATCTGAAAACAATGTC	254	False	NA	NA	False	AATAAA	-20	NA	87342366	87207623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87207809_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_17876.known	chr10	-	532	5	FSM	ENSG00000223482.9	ENST00000666515.2	536	5	0	4	0	-1	multi-exon	FALSE	canonical	3	7	junction_1	111.244100967197	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTCTCTATTGTTTAA	-10	True	NA	-8	True	AATAAA	-14	NA	87342393	87238670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87238850_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_17877.known	chr10	-	1014	5	FSM	ENSG00000223482.9	ENST00000655272.2	1039	5	25	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	120.40348832156	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	254	False	NA	NA	False	ATTAAA	-24	NA	87342366	87287958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87288496_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_17878.known	chr10	-	867	5	FSM	ENSG00000223482.9	ENST00000413722.6	867	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	125.647075174872	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-6	True	NA	NA	False	ATTAAA	-24	NA	87342350	87287958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87288496_87326629_87326673_87330891_87330966_87336785_87336890_87342241
transcript_17879.known	chr10	-	535	3	FSM	ENSG00000223482.9	ENST00000667985.2	734	3	8	191	0	126	multi-exon	FALSE	canonical	3	249	junction_1	16.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAGTATATGTTTGTGT	-6	True	NA	NA	False	CATAAA	-15	NA	87342389	87326389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87326673_87336785_87336890_87342241
transcript_17880.known	chr10	-	933	5	FSM	ENSG00000223482.9	ENST00000668676.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	124.054423540638	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-3	True	NA	NA	False	ATTAAA	-24	NA	87342386	87287958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87288496_87307956_87308061_87326629_87326673_87336785_87336890_87342241
transcript_17881.known	chr10	-	924	5	FSM	ENSG00000223482.9	ENST00000660454.1	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	111.448138163004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTCCAAAATCAGACAAC	290	False	NA	NA	False	AATAAA	-31	NA	87342330	87307577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87308061_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_17882.known	chr10	+	2470	5	FSM	ENSG00000107789.16	ENST00000371996.9	2470	5	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	31.0282129682004	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGACTCACCTGGCAAT	-4	True	NA	88	True	AATACA	-38	NA	87504892	87553461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87505553_87508335_87508534_87513123_87513222_87521035_87521170_87552081
transcript_17883.known	chr10	+	2183	3	FSM	ENSG00000107789.16	ENST00000371994.8	2183	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	175.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAGGACTTTTCTCTTC	0	True	NA	15	True	AATAAA	-20	NA	87504874	87553388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87505553_87508335_87508534_87552081
transcript_17884.known	chr10	+	3949	12	FSM	ENSG00000198682.13	ENST00000361175.8	3949	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	15.178279391593	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	NA	False	NA	21	True	AATAAA	-15	NA	87659612	87747705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_17896.known	chr10	-	4640	10	FSM	ENSG00000138138.14	ENST00000308448.11	4640	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	74.9029001070349	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	43	True	NA	NA	False	ATTAAA	-19	NA	87818160	87751511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87817794
transcript_17897.known	chr10	-	4334	10	FSM	ENSG00000138138.14	ENST00000680024.1	4334	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_9	44.5396203147016	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-23	True	NA	NA	False	ATTAAA	-19	NA	87818226	87751511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_1792.known	chr1	-	3322	16	FSM	ENSG00000142632.17	ENST00000270747.8	3322	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_15	45.0642011159881	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCCTGTGGCTTCTA	-13	True	NA	1	True	ATTAAA	-21	NA	16212652	16197853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179_16206341_16206947_16207211_16207521_16207599_16207674_16207778_16207943_16208226_16208642_16209084_16212501
transcript_17923.known	chr10	+	470	2	FSM	ENSG00000223820.5	ENST00000415212.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCAGCTTGTGCCTTT	68	False	NA	NA	False	NA	NA	NA	87818424	87819081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87818715_87818901
transcript_17925.nic	chr10	-	1401	2	ISM	ENSG00000138138.14	ENST00000681308.1	4045	11	-97	61478	-84	-28804	5prime_fragment	FALSE	canonical	3	235	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAACTAGTTTGAGT	NA	False	NA	NA	False	TTTAAA	-10	NA	87818310	87813355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_87814613_87818166
transcript_17926.known	chr10	-	4045	11	FSM	ENSG00000138138.14	ENST00000681308.1	4045	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	144.850405591424	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAATAAATTGGATG	-10	True	NA	-31	True	NA	NA	NA	87818213	87751877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87789039_87789130_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_1793.known	chr1	-	355	2	FSM	ENSG00000237276.9	ENST00000475369.2	998	2	93	550	93	12	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCCACCCGCAACATAA	9602	False	NA	NA	False	NA	NA	NA	16217328	16216456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16216610_16217126
transcript_17931.known	chr10	+	8515	9	FSM	ENSG00000171862.12	ENST00000371953.8	8515	9	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	15.1156996199316	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGGTTTTAAACTTTTTAT	-8	True	NA	12	True	ATTAAA	-21	NA	87863624	87971930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87864549_87894024_87894110_87925512_87925558_87931045_87931090_87933012_87933252_87952117_87952260_87957852_87958020_87960893_87961119_87965286
transcript_17935.known	chr10	+	523	1	FSM	ENSG00000213613.2	ENST00000395256.2	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATAAATTCTCATTTCT	21	False	NA	-39	True	NA	NA	NA	87945501	87946024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87945500_87946000
transcript_17936.nnic	chr10	+	331	2	Antisense	novelGene_ENSG00000227905.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAGTTAAATTTAGTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	88042668	88058180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_88042813_88057993
transcript_17942.known	chr10	-	2409	7	FSM	ENSG00000184719.12	ENST00000331772.9	2409	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	5.15320827791344	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGTTAATGTCACTTA	0	True	NA	NA	False	AATAAA	-24	NA	88583318	88284101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_88285507_88314465_88314642_88362551_88362726_88572902_88573062_88581566_88581710_88582201_88582308_88583072
transcript_17943.nnic	chr10	-	1295	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-99	-865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.5307969703391	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCTTAAGTCTTCGG	NA	False	NA	-10	True	AATAAA	-20	NA	88583431	88284966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362652_88523215_88523230_88582201_88582308_88583072
transcript_17944.nnic	chr10	-	1304	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-99	-865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.5307969703391	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCTTAAGTCTTCGG	NA	False	NA	-10	True	AATAAA	-20	NA	88583431	88284966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362661_88523215_88523230_88582201_88582308_88583072
transcript_17945.nnic	chr10	-	1370	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-156	-865	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.5307969703391	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCTTAAGTCTTCGG	NA	False	NA	-10	True	AATAAA	-20	NA	88583488	88284966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362670_88523215_88523230_88582201_88582308_88583072
transcript_1795.known	chr1	-	1574	5	FSM	ENSG00000132881.12	ENST00000375599.8	1574	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	5.1720402163943	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGAGACGTGTTCGTTC	-3	True	NA	-4	True	GATAAA	-22	NA	16237183	16231691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16232298_16232509_16232647_16232892_16233018_16233611_16233765_16236630
transcript_17957.known	chr10	-	525	4	FSM	ENSG00000184719.12	ENST00000437752.2	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	3.74165738677394	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTGCTTTTGCCAT	128	False	NA	NA	False	NA	NA	NA	88583190	88572903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_88573062_88581566_88581710_88582201_88582308_88583072
transcript_17959.known	chr10	-	3858	6	FSM	ENSG00000152766.6	ENST00000371930.5	3858	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCCTGTTCTTTTAAAAG	9294	False	88851857	NA	False	AATAAA	-17	NA	88851844	88819895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_88823019_88823279_88823379_88826037_88826116_88828558_88828667_88831834_88832027_88851586
transcript_1796.known	chr1	-	336	4	FSM	ENSG00000132881.12	ENST00000434014.1	336	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	6.59966329107444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGACGTGCCCGAGCGG	521	False	NA	NA	False	NA	NA	NA	16236659	16232280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16232298_16232509_16232647_16233611_16233765_16236630
transcript_17961.known	chr10	+	2021	11	FSM	ENSG00000138134.12	ENST00000371926.8	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	5.72712842531054	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTTGTATTTATAGAG	-11	True	NA	8	True	AATAAA	-16	NA	88880244	88923487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88923167
transcript_17965.known	chr10	+	1044	9	FSM	ENSG00000026103.23	ENST00000313771.9	1044	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.86362695664617	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTTTGTTCGAAAGAA	481	False	NA	NA	False	AGTAAA	-43	NA	88991287	89014177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_88991627_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89010752_89010816_89011998_89012082_89013342_89013368_89014118
transcript_17968.known	chr10	+	4184	11	FSM	ENSG00000138134.12	ENST00000371927.7	4184	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	10.6343782140753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAACTCTCA	366	False	NA	NA	False	ATTAAA	-45	NA	88879733	88975153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88973181
transcript_17969.known	chr10	-	1349	9	FSM	ENSG00000107796.13	ENST00000224784.10	1349	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.93700393700591	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGCGTTGGCCTCCGA	-2	True	NA	0	True	AATAAA	-22	NA	88952773	88935073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_88935367_88938060_88938243_88939506_88939699_88941228_88941391_88941784_88941870_88943796_88943908_88947257_88947387_88948801_88948954_88952730
transcript_17970.known	chr10	+	2605	8	FSM	ENSG00000026103.23	ENST00000355740.7	2605	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	8.39095723176481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTGGTTTTCTCTTTTT	0	True	NA	NA	False	ATTAAA	-14	NA	88990530	89015784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89010752_89010816_89013342_89013368_89014118
transcript_17976.nnic	chr10	-	2592	10	NNC	ENSG00000107798.18	novel	2496	10	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_9	71.9938268958604	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	-6	True	NA	-8	True	AATAAA	-26	NA	89251841	89213571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251706
transcript_17977.known	chr10	-	2496	10	FSM	ENSG00000107798.18	ENST00000336233.10	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_9	20.4999247213312	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	1	True	NA	-8	True	AATAAA	-26	NA	89251775	89213571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251736
transcript_17980.known	chr10	-	2527	8	FSM	ENSG00000107798.18	ENST00000456827.5	2527	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	83.3203799456394	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATTGTGTGTATGTTT	3282	False	NA	-11	True	AATAAA	-23	NA	89252039	89213574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89251736
transcript_17988.known	chr10	+	438	3	FSM	ENSG00000232110.9	ENST00000680136.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGTTTTTGAGCATCT	-7	True	NA	9	True	AATAAA	-17	NA	89283774	89292124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89283892_89285081_89285265_89291986
transcript_17989.nnic	chr10	+	548	3	NIC	ENSG00000232110.9	novel	495	3	NA	NA	-823	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTGAGCATCTT	1113	False	NA	10	True	AATAAA	-18	NA	89284952	89292125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_89285265_89287144_89287242_89291986
transcript_17990.nic	chr10	+	499	2	ISM	ENSG00000232110.9	ENST00000680136.1	438	3	1130	-1	-871	0	3prime_fragment	FALSE	canonical	3	26	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTGAGCATCTT	1065	False	NA	10	True	AATAAA	-18	NA	89284904	89292125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_89285265_89291986
transcript_17991.known	chr10	+	4302	2	FSM	ENSG00000185745.10	ENST00000371804.4	4302	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCTGCACTGCT	-14	True	NA	NA	False	AATAAA	-16	NA	89392622	89406487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89392718_89402280
transcript_17993.known	chr10	+	4029	2	FSM	ENSG00000152778.10	ENST00000371795.5	4029	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATATTGTCCTGCACCT	-34	True	NA	NA	False	AATAAA	-17	NA	89414567	89420997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89414804_89417204
transcript_18.known	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	594	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00043_+_0_1000
transcript_18003.known	chr10	-	2703	7	FSM	ENSG00000152782.18	ENST00000342512.3	2703	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	78.4573486395988	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-7	True	NA	-34	True	AATAAA	-18	NA	89643887	89582987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89643696
transcript_18005.nnic	chr10	+	658	5	NNC	ENSG00000232936.6	novel	2069	4	NA	NA	-1201	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.92028643696715	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	NA	False	NA	6	True	ATTAAA	-16	NA	89644070	89650667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_89644200_89648922_89649022_89649146_89649289_89650058_89650232_89650552
transcript_1801.known	chr1	-	6227	10	FSM	ENSG00000037637.11	ENST00000375592.8	6227	10	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_8	8.24621125123532	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTTATTAGCAAAAAAA	-24	True	NA	0	True	AATAAA	-18	NA	16352480	16246839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16352254
transcript_18010.known	chr10	+	563	4	FSM	ENSG00000232936.6	ENST00000454174.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	1169	False	NA	6	True	ATTAAA	-16	NA	89645281	89650667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89645458_89648922_89649022_89650058_89650232_89650552
transcript_18011.known	chr10	+	445	4	FSM	ENSG00000232936.6	ENST00000451733.1	445	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	1329	False	NA	6	True	ATTAAA	-16	NA	89645441	89650667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89645500_89648922_89649022_89650058_89650232_89650552
transcript_18014.known	chr10	-	572	4	FSM	ENSG00000152782.18	ENST00000488482.1	572	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.94392028877595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGGTGTTTCTATTTG	1277	False	NA	44	True	AATAAA	-20	NA	89643956	89625694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89625854_89626192_89626250_89626536_89626633_89643696
transcript_18018.nnic	chr10	-	1259	3	NNC	ENSG00000152782.18	novel	2513	6	NA	NA	11	-8455	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGTGGTGTTAGAT	1288	False	NA	-5	True	AATAAA	-13	NA	89643945	89634149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_89635066_89639148_89639243_89643696
transcript_18019.nic	chr10	-	1203	2	NIC	ENSG00000152782.18	novel	572	4	NA	NA	-9	-4	intron_retention	FALSE	canonical	2	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATGTTGGTGTTTCTA	1268	False	NA	40	True	AATAAA	-16	NA	89643965	89625698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_89626633_89643696
transcript_18020.nnic	chr10	-	1165	2	NNC	ENSG00000152782.18	novel	2513	6	NA	NA	11	-8455	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGTGGTGTTAGAT	1288	False	NA	-5	True	AATAAA	-13	NA	89643945	89634149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_89635066_89643696
transcript_18021.known	chr10	+	2069	4	FSM	ENSG00000232936.6	ENST00000660192.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.05480466765633	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAAACATGCCTAAGTC	1159	False	NA	NA	False	NA	NA	NA	89645271	89652144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89645500_89648922_89648999_89650058_89650232_89650552
transcript_18030.known	chr10	+	6441	33	FSM	ENSG00000138182.15	ENST00000371728.8	6441	33	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_15	51.6891909487612	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTCTTTCTGTGCCT	-12	True	NA	14	True	AATAAA	-13	NA	89701589	89774934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726292_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386_89738618_89738957_89739097_89743807_89743928_89745898_89745960_89751345_89751472_89752566_89752692_89754517_89754674_89758705_89758883_89760525_89760637_89762637_89762836_89768289_89768392_89768737_89768889_89772688_89772832_89773970
transcript_18031.known	chr10	+	660	6	FSM	ENSG00000138182.15	ENST00000447580.1	660	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	105.907506816089	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAGAAAGAAGAAATTG	17	False	NA	NA	False	NA	NA	NA	89701678	89711090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89701718_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960
transcript_18038.known	chr10	-	3467	4	FSM	ENSG00000148680.16	ENST00000336152.8	3467	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	31.0089592788206	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-26	True	NA	-20	True	AATAAA	-24	NA	90858039	90740822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_90742529_90743592_90743691_90748838_90749595_90857132
transcript_18040.known	chr10	-	3033	3	FSM	ENSG00000148680.16	ENST00000371719.2	3033	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	24.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTCTTATGTCATAC	-9	True	NA	-20	True	AATAAA	-24	NA	90857698	90740822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_90742529_90748833_90749595_90857132
transcript_18056.known	chr10	+	2332	11	FSM	ENSG00000148688.14	ENST00000371703.8	2332	11	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	41.6648532938735	2204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATGACCAGGTGAAATT	0	True	NA	12	True	AATAAA	-28	NA	90871973	90902191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312_90896393_90900569
transcript_18057.known	chr10	+	1004	13	FSM	ENSG00000148688.14	ENST00000413330.5	1004	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_12	221.309863213449	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCTTTAAAAGGTTGGT	0	True	NA	NA	False	NA	NA	NA	90871951	90903262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312_90896393_90900569_90900669_90902242_90902345_90903191
transcript_18058.known	chr10	+	1466	10	FSM	ENSG00000148688.14	ENST00000487998.5	1466	10	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_4	43.8330164754074	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTTTCATTTGGAG	-1	True	NA	12	True	AATAAA	-13	NA	90871972	90900762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90895484_90895879_90895918_90896312_90896393_90900569
transcript_18059.known	chr10	-	1790	9	FSM	ENSG00000148677.7	ENST00000371697.4	1790	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAAGTCCTTCTATAAG	0	True	NA	-15	True	AATAAA	-18	NA	90921087	90912095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_90912977_90915542_90915642_90915781_90915881_90916170_90916270_90917731_90917831_90918864_90918973_90919130_90919269_90920168_90920349_90921000
transcript_18061.nic	chr10	-	496	3	ISM	ENSG00000148677.7	ENST00000371697.4	1790	9	-142	7086	-142	-7086	5prime_fragment	FALSE	canonical	1	1	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGGAAAACTAAAGTTCC	23	True	NA	NA	False	AAGAAA	-10	NA	90921229	90919181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_90919269_90920168_90920349_90921000
transcript_18062.nic	chr10	-	294	2	ISM	ENSG00000148677.7	ENST00000371697.4	1790	9	-27	8073	-27	-8073	5prime_fragment	FALSE	canonical	1	1	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAGCCATCTGTGGAAT	3	True	NA	NA	False	NA	NA	NA	90921114	90920168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_90920349_90921000
transcript_18063.known	chr10	+	973	3	FSM	ENSG00000180628.15	ENST00000490164.1	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	10.5	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGTGTATTTTTCCT	6	True	NA	NA	False	AATAAA	-35	NA	91220782	91227960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_91220837_91222688_91222984_91227336
transcript_18067.nic	chr10	+	2129	5	NIC	ENSG00000165338.17	novel	395	3	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	13.9104277432436	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTGTCTTATTCCCA	NA	False	NA	3	True	AATAAA	-15	NA	91409234	91463664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_91409422_91425280_91425411_91460426_91460566_91461253_91461357_91462094
transcript_18068.known	chr10	+	2175	5	FSM	ENSG00000165338.17	ENST00000371681.8	2175	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.4298028946561	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTTGTCTTATTCCCA	-30	True	NA	3	True	AATAAA	-15	NA	91410343	91463664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_91410577_91425280_91425411_91460426_91460566_91461253_91461357_91462094
transcript_18069.known	chr10	+	395	3	FSM	ENSG00000165338.17	ENST00000631422.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	17.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAAAGACTTTCAGTAA	-1	True	NA	NA	False	AATGAA	-45	NA	91409279	91460549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_91409422_91425280_91425411_91460426
transcript_18070.known	chr10	-	2541	2	FSM	ENSG00000119938.9	ENST00000238994.6	2541	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGTATATTTTCTTT	-5	True	NA	-4	True	AATAAA	-15	NA	91633071	91628441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_91630867_91632955
transcript_18072.nnic	chr10	-	990	3	NNC	ENSG00000228701.3	novel	823	2	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTAGTTTGTGGTCTT	9197	False	NA	-3	True	AATAAA	-16	NA	91798336	91782838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_91783161_91792966_91793111_91797812
transcript_18073.known	chr10	-	609	2	FSM	ENSG00000228701.3	ENST00000432246.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAGAGCCTTCAGAGAG	9337	False	NA	-100	True	AAGAAA	-8	NA	91798196	91782935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_91783161_91797812
transcript_18074.known	chr10	-	377	2	FSM	ENSG00000228701.3	ENST00000432938.1	377	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTAGTTTGTGGTCTT	9242	False	NA	-3	True	AATAAA	-16	NA	91798291	91782838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_91783161_91798236
transcript_18081.known	chr10	+	571	2	FSM	ENSG00000272817.1	ENST00000610263.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATGATTCCTTGGAA	NA	False	NA	27	True	AATAAA	-16	NA	91908130	91909348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_91908250_91908896
transcript_18082.known	chr10	-	2553	2	FSM	ENSG00000174721.10	ENST00000311575.6	2553	2	0	0	0	0	multi-exon	FALSE	canonical	3	1450	junction_1	0	2526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTTGCAACC	5	True	NA	0	True	TATAAA	-19	NA	91909486	91906583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_91909048_91909397
transcript_18083.known	chr10	+	3922	6	FSM	ENSG00000198060.10	ENST00000358935.3	3922	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	21.2828569510768	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTGTACTTTGTTAAA	-16	True	NA	7	True	AATAAA	-15	NA	92291166	92353964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92291530_92311134_92311338_92340672_92340804_92349348_92349533_92349670_92349838_92351090
transcript_18087.known	chr10	-	5467	26	FSM	ENSG00000119912.18	ENST00000677096.1	5467	26	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_24	81.780525799239	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTTCACCTCTGGAGTC	9	True	NA	-16	True	AATAAA	-6	NA	92574056	92452255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92559033_92559216_92573921
transcript_18088.known	chr10	-	5894	25	FSM	ENSG00000119912.18	ENST00000265986.11	5894	25	0	0	0	0	multi-exon	TRUE	canonical	3	225	junction_20	27.7318509219193	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-28	True	NA	NA	False	NA	NA	NA	92574093	92451683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_18092.known	chr10	-	5064	23	FSM	ENSG00000119912.18	ENST00000677079.1	5064	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	66.3219669927327	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTACCTGAGGCTTCTT	-31	True	NA	NA	False	AGTAAA	-23	NA	92574096	92452375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_92454540_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_18095.known	chr10	+	5010	22	FSM	ENSG00000138160.7	ENST00000677720.1	5010	22	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_15	74.6837626200834	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCTTGCTCCATAATT	-14	True	NA	37	True	AATAAA	-45	NA	92593129	92655393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92593453_92606264_92606398_92606618_92606717_92607158_92607238_92609019_92609206_92609384_92609510_92613039_92613131_92613376_92613620_92616736_92616833_92621384_92621474_92628807_92628896_92630175_92630365_92632485_92632694_92633622_92633796_92637183_92637310_92637390_92637546_92639793_92639901_92645362_92645643_92648211_92648435_92649834_92649987_92650400_92650518_92653664
transcript_18097.known	chr10	+	1724	4	FSM	ENSG00000152804.11	ENST00000282728.10	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	8.2192186706253	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTAATTCTTTGATT	1	True	NA	24	True	AATAAA	-28	NA	92689954	92695647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92690348_92692367_92692547_92692701_92692753_92694546
transcript_18099.known	chr10	+	1605	4	FSM	ENSG00000152804.11	ENST00000472590.6	1605	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100.270744597925	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTGCAAGTCTAATTCT	-4	True	NA	18	True	AATAAA	-22	NA	92691819	92695641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92692100_92692367_92692547_92692701_92692753_92694546
transcript_181.known	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2872	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_+_1100_1600
transcript_18100.known	chr10	+	808	3	FSM	ENSG00000152804.11	ENST00000492654.3	808	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAAACTGGATTTAGG	125	False	NA	NA	False	GATAAA	-42	NA	92692031	92694788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92692547_92692701_92692753_92694546
transcript_18102.known	chr10	+	3564	22	FSM	ENSG00000138190.17	ENST00000260762.10	3564	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_14	6.99983802857636	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTACTATTTTGTCTAT	8	True	NA	14	True	ATTAAA	-24	NA	92848519	93059490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92919981_92920051_92928338_92928423_92934143_92934191_92934309_92934431_92935813_92935886_92940726_92940825_92948273_92948380_92952272_92952383_92954629_92954742_92955579_92955715_92974052_92974233_92997473_92997616_93014193_93014268_93056923_93057037_93058222
transcript_18107.nic	chr10	+	1014	9	ISM	ENSG00000138190.17	ENST00000260762.10	3564	22	-68	131108	-16	12352	5prime_fragment	FALSE	canonical	3	29	junction_7	7.11951543294907	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAAGCAAGACTGGTAT	594	False	NA	NA	False	AAGAAA	-1	NA	92848451	92928382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92919981_92920051_92928338
transcript_18108.nic	chr10	+	1018	7	ISM	ENSG00000138190.17	ENST00000443748.6	3310	18	-16	143463	-16	0	5prime_fragment	FALSE	canonical	3	37	junction_6	4.64279609239471	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAGTCAAAATGGAGT	594	False	NA	NA	False	AATAAA	-17	NA	92848451	92916030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757
transcript_18109.known	chr10	+	2714	5	FSM	ENSG00000138190.17	ENST00000371543.5	2714	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	2.06155281280883	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGAGCGTGGTGGCGCG	12	False	NA	NA	False	NA	NA	NA	92848484	92901851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598
transcript_18114.nnic	chr10	+	1603	3	NNC	ENSG00000138190.17	novel	3678	23	NA	NA	33659	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	18	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTACTATTTTGTCTAT	NA	False	NA	14	True	ATTAAA	-24	NA	93031132	93059490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_93031355_93056923_93057037_93058222
transcript_18116.known	chr10	-	442	2	FSM	ENSG00000226425.1	ENST00000444965.1	442	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGAGAGAACAAGTGCGC	NA	False	NA	NA	False	ATTAAA	-19	NA	93060426	93059662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93059906_93060227
transcript_18119.known	chr10	+	2245	7	FSM	ENSG00000095596.12	ENST00000371531.5	2245	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2049.02697775202	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCAGAACTGTTCTCTG	1405	False	NA	22	True	AATAAA	-16	NA	93073474	93077884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93073835_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_18129.known	chr10	+	2117	7	FSM	ENSG00000095596.12	ENST00000224356.5	2117	7	0	0	0	0	multi-exon	FALSE	canonical	3	5186	junction_4	300.123169160041	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAACTGTTCTCTGA	1	True	NA	23	True	AATAAA	-17	NA	93073892	93077885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93074124_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_18130.known	chr10	+	1456	6	FSM	ENSG00000095596.12	ENST00000624589.3	1456	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2190.87398085787	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAATTTGAAGGTACTT	353	False	NA	22	True	ATTAAA	-29	NA	93074311	93077479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93074533_93074798_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_18131.known	chr10	+	484	2	FSM	ENSG00000095596.12	ENST00000625202.1	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	5748	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATGCATCCAGGTTCAG	2374	False	NA	NA	False	NA	NA	NA	93076332	93077082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93076697_93076962
transcript_18132.nic	chr10	-	2257	13	ISM	ENSG00000138119.17	ENST00000358334.9	6680	53	148181	-1	-4240	0	3prime_fragment	FALSE	canonical	3	26	junction_10	8.64098759787715	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTGTTTGTTGTAA	3011	False	NA	-2	True	AATAAA	-16	NA	93334013	93306428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_93307002_93310019_93310168_93310533_93310644_93313019_93313211_93316713_93316814_93319871_93320014_93323077_93323174_93323269_93323359_93325825_93325966_93328762_93328912_93329663_93329835_93333220_93333313_93333757
transcript_1814.known	chr1	+	3447	3	FSM	ENSG00000055070.17	ENST00000401089.3	3447	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	237	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	58	False	NA	24	True	TATAAA	-33	NA	16367224	16398145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16367309_16393227_16393483_16395037
transcript_18144.nnic	chr10	+	985	5	Antisense	novelGene_ENSG00000213432.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_4	9.54921462739214	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGAGCTTTACTTGTG	NA	False	NA	6	True	AATAAA	-18	NA	93281337	93322696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_93281527_93313174_93313322_93315662_93315749_93321440_93321576_93322268
transcript_18146.nnic	chr10	+	793	5	Antisense	novelGene_ENSG00000213432.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_3	5.62916512459885	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCGAACATTTCCTCTTT	NA	False	NA	4	True	AATAAA	-16	NA	93281337	93322631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_93281527_93313174_93313322_93315662_93315749_93321440_93321576_93322395
transcript_18148.nnic	chr10	+	882	5	Antisense	novelGene_ENSG00000213432.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_3	5.62916512459885	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGAGCTTTACTTGTG	NA	False	NA	6	True	AATAAA	-18	NA	93281313	93322696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_93281527_93313174_93313322_93315662_93315749_93321440_93321576_93322395
transcript_18154.known	chr10	-	6860	54	FSM	ENSG00000138119.17	ENST00000359263.9	6860	54	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_16	10.7165825065381	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTGTTTGTTGTAA	-1	True	NA	-2	True	AATAAA	-16	NA	93482334	93306428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93307002_93310019_93310168_93310533_93310644_93313019_93313211_93316713_93316814_93319871_93320014_93323077_93323174_93323269_93323359_93325825_93325966_93328762_93328912_93329663_93329835_93333220_93333313_93333757_93333914_93335920_93336047_93337814_93337914_93340152_93340165_93343855_93343933_93347616_93347783_93349807_93349970_93351196_93351296_93351412_93351572_93351664_93351847_93353810_93353889_93355627_93355737_93356674_93356849_93359832_93359979_93361451_93361558_93363960_93364076_93366391_93366556_93369644_93369777_93372929_93373086_93374762_93374956_93377322_93377430_93379862_93379988_93381218_93381397_93387796_93387914_93389029_93389155_93392916_93392956_93396141_93396225_93397246_93397291_93397387_93397457_93399391_93399496_93401417_93401545_93402231_93402348_93402859_93402891_93404022_93404074_93404156_93404220_93408786_93408916_93409572_93409740_93426070_93426159_93431407_93431517_93452049_93452142_93456881_93456938_93482106
transcript_18155.known	chr10	-	1519	15	FSM	ENSG00000138119.17	ENST00000371489.5	1519	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	4.60921880140048	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTCTGGATTGTCTCTTT	267	False	NA	NA	False	AATAAA	-20	NA	93482317	93397184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93397291_93397387_93397457_93399391_93399496_93401417_93401545_93402231_93402348_93402859_93402891_93404022_93404074_93404156_93404220_93408786_93408916_93409572_93409740_93426070_93426159_93431407_93431517_93452049_93452142_93456881_93456938_93482106
transcript_18156.known	chr10	+	2658	9	FSM	ENSG00000138180.16	ENST00000371485.8	2658	9	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	32.0407455437604	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	-14	True	NA	13	True	AATAAA	-18	NA	93496611	93529092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93496924_93500039_93500235_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_18158.known	chr10	-	1070	6	FSM	ENSG00000138207.15	ENST00000371464.8	1070	6	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_3	3.05941170815567	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTGAAAAGGAAGTTTC	0	True	NA	NA	False	ATTAAA	-17	NA	93601235	93591693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93592113_93593822_93594036_93600392_93600500_93600666_93600804_93600917_93601047_93601170
transcript_18187.known	chr10	-	3109	14	FSM	ENSG00000148690.12	ENST00000359204.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_13	26.4324527089905	765	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTGTAGTGTGTAAAAA	-28	True	NA	NA	False	AATAAA	-19	NA	93702592	93667882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_18188.known	chr10	+	664	2	FSM	ENSG00000108231.14	ENST00000627699.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGAACTTGGGTTCTT	-12	True	NA	NA	False	NA	NA	NA	93758075	93759130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93758369_93758759
transcript_1819.known	chr1	+	3401	3	FSM	ENSG00000055070.17	ENST00000492354.1	3401	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	212	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	26	False	NA	21	True	TATAAA	-30	NA	16367264	16398142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16367309_16393230_16393483_16395037
transcript_18190.known	chr10	-	3455	21	FSM	ENSG00000173145.11	ENST00000371361.3	3455	21	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_12	18.2087890865922	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGATATGATAATTT	10	True	NA	-2	True	AATAAA	-25	NA	94362939	94333225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_94334306_94334633_94334719_94337776_94337875_94338607_94338737_94339738_94339921_94340275_94340348_94340432_94340497_94341672_94341746_94344414_94344516_94344852_94344934_94346424_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_18197.nic	chr10	-	855	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-58	21737	-38	6361	5prime_fragment	FALSE	canonical	3	193	junction_3	16.9776323437634	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGTATTAATTTCTT	NA	False	NA	NA	False	NA	NA	NA	94362997	94354962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_18199.nic	chr10	-	789	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-58	21803	-38	6295	5prime_fragment	FALSE	canonical	3	193	junction_3	16.9776323437634	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGGAGAAGAAGATGCA	NA	False	NA	NA	False	AAGAAA	-1	NA	94362997	94355028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_182.known	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_+_4000_4500
transcript_1821.known	chr1	+	3480	4	FSM	ENSG00000055070.17	ENST00000401088.9	3480	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	241.178126887346	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	3	True	NA	24	True	TATAAA	-33	NA	16367241	16398145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16367309_16391374_16391425_16393227_16393483_16395037
transcript_18213.known	chr10	+	3128	22	FSM	ENSG00000119969.15	ENST00000348459.10	3128	22	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	53.544056499247	2561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTAAATTATTTCTTC	-22	True	NA	18	True	AATAAA	-18	NA	94545787	94602099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_18214.known	chr10	+	711	8	FSM	ENSG00000119969.15	ENST00000419900.5	711	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	103.882783236979	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTACCTTTTCAACAACC	-20	True	NA	NA	False	ACTAAA	-37	NA	94545789	94574106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959
transcript_18215.known	chr10	+	400	4	FSM	ENSG00000119969.15	ENST00000630929.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	220.123197828448	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTGCAAATTGAGAG	6	True	NA	NA	False	NA	NA	NA	94545815	94557196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94557178
transcript_1822.known	chr1	+	981	9	FSM	ENSG00000157191.20	ENST00000459640.5	981	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	181.357381983751	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGAAGCCCTCCTCAGCT	27	True	NA	NA	False	NA	NA	NA	16440755	16458956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16450124_16450242_16451837_16452016_16455817_16455894_16458841
transcript_18221.nnic	chr10	+	1067	8	NNC	ENSG00000173124.14	novel	2307	9	NA	NA	14068	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.63887656499994	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATATTGTGGAGTATAT	NA	False	NA	NA	False	AATAAA	-21	NA	95208544	95228924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_95208640_95210649_95210794_95211877_95212035_95212857_95212941_95214851_95214976_95219890_95219972_95225289_95225392_95228643
transcript_18230.known	chr10	-	1431	7	FSM	ENSG00000107438.9	ENST00000329399.7	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_6	176.130081347723	3958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGTGTCTGTTATC	0	True	NA	-5	True	AATAAA	-16	NA	95291003	95237571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95271632_95271785_95290819
transcript_18233.known	chr10	-	850	6	FSM	ENSG00000107438.9	ENST00000477757.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	560.944560540523	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAAATCTACTGTGAGA	-9	True	NA	NA	False	NA	NA	NA	95291012	95238009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95290819
transcript_18243.known	chr10	-	5927	25	FSM	ENSG00000095637.23	ENST00000371249.6	5927	25	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_20	22.0548558523212	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	6	True	NA	-1	True	AATAAA	-23	NA	95561378	95311772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95414493_95414863_95421960_95422074_95422189_95422217_95432447_95432577_95437489_95437556_95441125_95441181_95491034_95491121_95561319
transcript_18246.known	chr10	-	3337	18	FSM	ENSG00000059573.9	ENST00000371221.3	3337	18	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_12	184.727125042977	470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGTGCGTGATTGA	-7	True	NA	-19	True	AATAAA	-11	NA	95656706	95605944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95606944_95610196_95610293_95611255_95611443_95613741_95613864_95613965_95614162_95616476_95616615_95621030_95621252_95625361_95625456_95626702_95626777_95627441_95627587_95628367_95628493_95632958_95633050_95633496_95633650_95637092_95637198_95637286_95637437_95642991_95643207_95653289_95653406_95656596
transcript_18249.known	chr10	-	2552	14	FSM	ENSG00000119977.22	ENST00000614499.5	2552	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	77.191454903112	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	NA	False	NA	-35	True	AATAAA	-14	NA	95693989	95663413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_18255.known	chr10	-	2414	13	FSM	ENSG00000119977.22	ENST00000680144.1	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	135.827300479526	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-5	True	NA	-22	True	AATAAA	-27	NA	95693919	95663400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_18259.known	chr10	-	2364	13	FSM	ENSG00000119977.22	ENST00000679984.1	2364	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	142.866755132964	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTTCATTGTGAGGAAAAA	5	True	NA	23	True	NA	NA	NA	95693947	95663450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_1826.known	chr1	+	2018	8	FSM	ENSG00000157191.20	ENST00000337132.10	2018	8	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_4	35.860273056315	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATGTGAAAGATGAATG	-5	True	NA	11	True	AATAAA	-18	NA	16440723	16460078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841
transcript_18264.known	chr10	-	2235	12	FSM	ENSG00000119977.22	ENST00000680709.1	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	151.761938411491	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGTGAGGAAAAATAAA	10	True	NA	27	True	NA	NA	NA	95693942	95663446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95692919_95693039_95693352_95693477_95693643
transcript_18268.known	chr10	-	1464	10	FSM	ENSG00000119977.22	ENST00000371209.5	1464	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_2	43.9573306011665	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAATGCTGCCTCCTT	15	True	NA	NA	False	AATAAA	-29	NA	95693899	95683260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_1827.known	chr1	+	1929	7	FSM	ENSG00000157191.20	ENST00000443980.6	1929	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	152.545894733356	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	7	True	NA	10	True	AATAAA	-17	NA	16440735	16460077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16458841
transcript_18271.known	chr10	-	557	3	FSM	ENSG00000119977.22	ENST00000478245.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	15.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCTGGCCCACATTGG	13	True	NA	NA	False	NA	NA	NA	95693901	95692863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95693039_95693352_95693477_95693643
transcript_18273.known	chr10	+	1903	10	FSM	ENSG00000138185.20	ENST00000371207.8	1903	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	2.94811092476036	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACCTTTCATAATCTTT	NA	False	NA	-40	True	TTTAAA	-5	NA	95755651	95866654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_95755767_95823236_95823365_95839690_95839809_95842343_95842495_95844475_95844636_95845356_95845597_95847445_95847707_95860468_95860583_95864723_95864862_95866176
transcript_18274.known	chr10	+	12493	10	FSM	ENSG00000138185.20	ENST00000371205.5	12493	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.54163943344649	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTGGGACAATTCTAG	2	True	NA	NA	False	AATAAA	-17	NA	95756162	95877266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_95756256_95823236_95823365_95839690_95839809_95842343_95842495_95844475_95844636_95845356_95845597_95847445_95847707_95860468_95860583_95864723_95864862_95866176
transcript_18284.known	chr10	-	2366	4	FSM	ENSG00000226688.8	ENST00000449419.6	2366	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	32.2593655651606	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAGTCCAATTAAACCC	-18	True	NA	-39	True	NA	NA	NA	95907890	95873777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95875667_95876517_95876661_95904829_95904936_95907662
transcript_18287.known	chr10	-	3965	3	FSM	ENSG00000226688.8	ENST00000657446.1	3965	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAAAATCCCTGGGTAA	-31	True	NA	-58	True	ATTAAA	-18	NA	95907903	95873045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95876661_95904829_95904939_95907662
transcript_18288.known	chr10	-	3878	3	FSM	ENSG00000226688.8	ENST00000669099.1	3878	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTAAATTTTGAGATGC	-31	True	NA	-30	True	ATTAAA	-40	NA	95907903	95873017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95876661_95904829_95904939_95907777
transcript_18289.known	chr10	-	2961	3	FSM	ENSG00000226688.8	ENST00000662079.1	2961	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	40.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGAATTATTTATATTAA	-29	True	NA	-100	True	NA	NA	NA	95907901	95873087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95875667_95876517_95876661_95907662
transcript_18290.known	chr10	-	1036	3	FSM	ENSG00000226688.8	ENST00000667309.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	37.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGATGCAGTAGAAAAGAAA	-16	True	NA	NA	False	CATAAA	-21	NA	95908178	95875174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95875667_95876517_95876661_95907777
transcript_18295.nic	chr10	-	535	2	ISM	ENSG00000226688.8	ENST00000661794.1	3966	4	0	31478	0	11	5prime_fragment	FALSE	canonical	3	56	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAGAAAAACCATCAAC	-31	True	NA	NA	False	AAAACA	-5	NA	95907903	95904644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_95904939_95907662
transcript_18296.known	chr10	-	389	2	FSM	ENSG00000226688.8	ENST00000427300.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAAACAAAAAGAA	-11	True	NA	NA	False	NA	NA	NA	95907883	95904655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95904939_95907777
transcript_18297.known	chr10	-	617	2	FSM	ENSG00000226688.8	ENST00000444375.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGATATAGTATTTTA	9	True	NA	NA	False	TTTAAA	-26	NA	96090199	96088908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_96089308_96089981
transcript_183.known	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2837	junction_1	156	4301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_-_3826_3966_4480_4687
transcript_18303.known	chr10	+	1241	8	FSM	ENSG00000188649.15	ENST00000423344.6	1241	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.09047252182628	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAAAACACTGGCTACT	62	False	NA	NA	False	NA	NA	NA	95907964	95938723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_95908058_95911300_95911360_95913381_95913438_95922015_95922077_95924313_95924391_95924778_95924845_95927236_95927333_95937990
transcript_18307.known	chr10	+	3959	6	FSM	ENSG00000107443.16	ENST00000465148.3	3959	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	24.2074368738204	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	25	True	NA	NA	False	AATAAA	-18	NA	96043582	96060870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057087_96057248_96057829
transcript_18308.known	chr10	+	4115	6	FSM	ENSG00000107443.16	ENST00000265992.9	4115	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	87.7254809049229	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCGGTATTTTTGTTT	345	False	NA	NA	False	AATAAA	-18	NA	96043393	96060870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96043720_96044352_96044463_96050255_96050467_96056700_96057001_96057120_96057248_96057829
transcript_18323.nnic	chr10	+	1458	6	NIC	ENSG00000177853.15	novel	8001	6	NA	NA	-61	1185	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	20.283983829613	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGGAAAAAGACAAATATGA	272	False	NA	NA	False	AAGAAA	-3	NA	96129994	96157204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_96130119_96132585_96132671_96133582_96133649_96155325_96155377_96155923_96156048_96156196
transcript_18328.nnic	chr10	+	1794	6	FSM	ENSG00000177853.15	ENST00000316045.10	8345	6	-4	6555	-4	1185	multi-exon	FALSE	canonical	3	35	junction_1	14.1929559993681	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGGAAAAAGACAAATATGA	5	True	NA	NA	False	AAGAAA	-3	NA	96130292	96157204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96130753_96132585_96132671_96133582_96133649_96155325_96155377_96155923_96156048_96156196
transcript_1833.known	chr1	+	572	2	FSM	ENSG00000157191.20	ENST00000486390.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTATGGCTATTTTG	7	True	NA	NA	False	ATTAAA	-29	NA	16440735	16441619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16440854_16441165
transcript_18339.nnic	chr10	+	1346	5	NIC	ENSG00000177853.15	novel	8001	6	NA	NA	0	1185	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	27.7522521608607	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGGAAAAAGACAAATATGA	7	True	NA	NA	False	AAGAAA	-3	NA	96130055	96157204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_96130119_96132585_96132671_96133582_96133649_96155923_96156048_96156196
transcript_1834.known	chr1	+	1787	9	FSM	ENSG00000157191.20	ENST00000492095.5	1787	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	139.544739689463	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	14	True	NA	10	True	AATAAA	-17	NA	16440742	16460077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841_16459063_16459273
transcript_18344.nnic	chr10	+	1743	5	NIC	ENSG00000177853.15	novel	8345	6	NA	NA	-4	1185	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	24.5662369930765	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGGAAAAAGACAAATATGA	5	True	NA	NA	False	AAGAAA	-3	NA	96130292	96157204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_96130753_96132585_96132671_96133582_96133649_96155923_96156048_96156196
transcript_18349.nic	chr10	+	658	2	ISM	ENSG00000177853.15	ENST00000488700.5	729	6	-64	23098	-44	12	5prime_fragment	FALSE	canonical	3	24	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGAATGAAACCCT	NA	False	NA	NA	False	AAAAAG	-6	NA	96129670	96132921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_96129993_96132585
transcript_1835.known	chr1	-	164	1	FSM	ENSG00000206652.1	ENST00000383925.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	3	False	NA	NA	False	NA	NA	NA	16514285	16514121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16514100_16514300
transcript_18350.nic	chr10	+	460	2	ISM	ENSG00000177853.15	ENST00000539666.5	485	5	-61	18645	-61	12	5prime_fragment	FALSE	canonical	3	14	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGAATGAAACCCT	272	False	NA	NA	False	AAAAAG	-6	NA	96129994	96132921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_96130119_96132585
transcript_18352.nnic	chr10	+	796	2	ISM	ENSG00000177853.15	ENST00000316045.10	8345	6	-4	30838	-4	12	5prime_fragment	FALSE	canonical	3	35	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGAATGAAACCCT	5	True	NA	NA	False	AAAAAG	-6	NA	96130292	96132921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_96130753_96132585
transcript_18353.known	chr10	+	468	2	FSM	ENSG00000177853.15	ENST00000484770.1	468	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAGAAAAAAA	118	False	NA	NA	False	NA	NA	NA	96130678	96132909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96130823_96132585
transcript_18354.known	chr10	-	1474	1	FSM	ENSG00000287009.1	ENST00000669444.1	1474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTTTAGGAAGCCTT	NA	False	NA	NA	False	AATAAA	-22	NA	96130528	96129054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_96129100_96130500
transcript_18355.known	chr10	+	729	6	FSM	ENSG00000177853.15	ENST00000488700.5	729	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	15.0332963783729	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTACTTCAAACTATT	12	True	NA	NA	False	NA	NA	NA	96129734	96156019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96129993_96132585_96132671_96133582_96133649_96151415_96151567_96155325_96155399_96155923
transcript_18357.nic	chr10	-	733	2	ISM	ENSG00000095587.9	ENST00000469598.1	1887	13	117501	0	-21056	0	3prime_fragment	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGGTATGAATTAGCAG	1591	False	NA	-8	True	AATAAA	-23	NA	96396417	96395192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_96395383_96395874
transcript_18358.known	chr10	-	6250	15	FSM	ENSG00000077147.16	ENST00000649367.1	6250	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_14	507.098710352153	1999	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAATGTACTTCCTTTG	727	False	NA	-15	True	AATAAA	-2	NA	96586594	96518120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_96522331_96527212_96527290_96527412_96527497_96528030_96528178_96530539_96530609_96533050_96533191_96544075_96544207_96547894_96547990_96551244_96551412_96552927_96553060_96559658_96559737_96561977_96562139_96565303_96565427_96576633_96576830_96586154
transcript_1836.nnic	chr1	+	504	2	NNC	ENSG00000224174.2	novel	327	2	NA	NA	-43	9	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTGGTTTTATCATTT	NA	False	NA	23	True	AATAAA	-28	NA	16520650	16521805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_16520910_16521560
transcript_18360.nnic	chr10	+	621	2	Genic_Genomic	ENSG00000236552.2	novel	612	1	NA	NA	-12791	44	multi-exon	FALSE	canonical	2	2	junction_1	0	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGGAAAAAA	-2	True	NA	NA	False	AATAAA	-35	NA	96737496	96750943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_96737608_96750433
transcript_18361.nnic	chr10	+	608	2	Genic_Genomic	ENSG00000236552.2	novel	612	1	NA	NA	-24	38	multi-exon	TRUE	canonical	0	0	junction_1	0	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAAGG	-9	True	NA	NA	False	AATAAA	-29	NA	96750263	96750937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_96750597_96750662
transcript_18362.nnic	chr10	+	604	2	Genic_Genomic	ENSG00000236552.2	novel	612	1	NA	NA	-23	37	multi-exon	FALSE	canonical	2	4	junction_1	0	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	-8	True	NA	NA	False	AATAAA	-28	NA	96750264	96750936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_96750366_96750433
transcript_18363.nnic	chr10	+	554	2	Genic_Genomic	ENSG00000236552.2	novel	612	1	NA	NA	-23	38	multi-exon	FALSE	canonical	1	58	junction_1	0	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAAGG	-8	True	NA	NA	False	AATAAA	-29	NA	96750264	96750937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_96750544_96750662
transcript_18364.known	chr10	+	612	1	FSM	ENSG00000236552.2	ENST00000439189.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63357	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	15	False	NA	NA	False	AATACA	-36	NA	96750287	96750899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96750300_96750900
transcript_18366.nic	chr10	+	1394	8	NIC	ENSG00000196233.14	novel	2213	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_7	19.645843928767	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAAGCTGCTGGAAT	-25	True	NA	NA	False	AAAAAG	-27	NA	96832253	96958924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96958411
transcript_18367.known	chr10	+	4834	8	FSM	ENSG00000196233.14	ENST00000356016.7	4834	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	20.8307073174902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAACTTAAAAA	12	True	NA	NA	False	NA	NA	NA	96832954	96958891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96833115_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96954952
transcript_1837.known	chr1	+	327	2	FSM	ENSG00000224174.2	ENST00000452795.2	327	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAAATTACGTTGGTT	NA	False	NA	14	True	AATAAA	-19	NA	16520693	16521796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16520788_16521563
transcript_18371.nic	chr10	+	1320	7	NIC	ENSG00000196233.14	novel	2213	9	NA	NA	0	-2	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	21.1555088701632	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAAGCTGCTGGAAT	-25	True	NA	NA	False	AAAAAG	-27	NA	96832253	96958924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_96832400_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96958411
transcript_1838.nnic	chr1	+	604	2	NNC	ENSG00000224174.2	novel	327	2	NA	NA	71	9	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTGGTTTTATCATTT	NA	False	NA	23	True	AATAAA	-28	NA	16520764	16521805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_16521124_16521560
transcript_18380.known	chr10	-	1876	15	FSM	ENSG00000269891.2	ENST00000479633.2	1876	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.093342208508	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTTCGTTGCTGTATT	3	True	NA	NA	False	AATAAA	-12	NA	97292637	97153045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97153222_97157817_97157890_97163379_97163452_97164818_97164891_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_18383.known	chr10	-	5438	12	FSM	ENSG00000213390.11	ENST00000358531.9	5438	12	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_2	36.1244405716071	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGATTTGACTGGTC	3	True	NA	-8	True	ATTAAA	-17	NA	97292637	97222178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_18385.known	chr10	-	5390	11	FSM	ENSG00000213390.11	ENST00000358308.7	5390	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	99.9692452707331	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATTTGACTGGTCTAT	NA	False	NA	-5	True	ATTAAA	-20	NA	97292673	97222175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_18391.known	chr10	+	633	2	FSM	ENSG00000165879.9	ENST00000490980.1	633	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGTTTTATTTTATAC	1209	False	NA	21	True	AATAAA	-15	NA	97320740	97321823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97321235_97321684
transcript_18394.known	chr10	+	805	2	FSM	ENSG00000225850.4	ENST00000445808.4	806	2	0	1	0	-1	multi-exon	FALSE	canonical	3	48	junction_1	0	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGACCCAGTAATTCC	NA	False	NA	NA	False	ATTAAA	-23	NA	97334563	97343203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97334972_97342806
transcript_18395.nnic	chr10	+	1403	2	NNC	ENSG00000225850.4	novel	806	2	NA	NA	249	-3886	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	22	True	AATAAA	-22	NA	97334812	97339318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_97334972_97338074
transcript_18396.nnic	chr10	+	753	2	NNC	ENSG00000225850.4	novel	806	2	NA	NA	251	-3886	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	22	True	AATAAA	-22	NA	97334814	97339318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_97334972_97338722
transcript_18397.known	chr10	-	4396	34	FSM	ENSG00000052749.14	ENST00000370992.9	4396	34	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_23	32.88609051704	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	-27	True	NA	-12	True	AATAAA	-17	NA	97401340	97356700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092
transcript_1840.known	chr1	+	1110	1	FSM	ENSG00000261135.1	ENST00000562878.1	1110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGACTCATCTTTGAC	NA	False	NA	6	True	AATAAA	-16	NA	16514644	16515754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16514600_16515800
transcript_18400.known	chr10	-	886	4	FSM	ENSG00000052749.14	ENST00000621606.4	886	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTTCCCTGACAGC	7	True	NA	NA	False	NA	NA	NA	97426046	97418792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97419496_97424800_97424894_97425673_97425740_97426022
transcript_18416.known	chr10	+	1187	4	FSM	ENSG00000171314.9	ENST00000467867.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	3197.02455417534	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCACTCCCTTCATAC	1241	False	NA	NA	False	NA	NA	NA	97427533	97432690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97427929_97430378_97430654_97430954_97431136_97432354
transcript_18418.known	chr10	+	497	2	FSM	ENSG00000171314.9	ENST00000473929.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTCATCTTTCCAAGG	0	True	NA	NA	False	AATAAA	-16	NA	97426292	97427443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97426447_97427100
transcript_18419.known	chr10	+	1802	4	FSM	ENSG00000171314.9	ENST00000334828.6	1802	4	0	0	0	0	multi-exon	FALSE	canonical	3	6827	junction_3	261.128746449375	17579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTGATGTGGAAGAC	10	True	NA	1	True	AATAAA	-20	NA	97426190	97433444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97426447_97430378_97430654_97430954_97431136_97432354
transcript_18420.known	chr10	-	718	7	FSM	ENSG00000171311.13	ENST00000370885.8	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	229.138058820441	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGGCACCAACAAACAAAA	9	True	NA	-32	True	AATAAA	-12	NA	97445993	97436247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97445731_97445848_97445954
transcript_18421.known	chr10	-	741	7	FSM	ENSG00000171311.13	ENST00000370886.9	741	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	249.057556935474	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACCAACAAACAAAACTGT	14	True	NA	-28	True	AATAAA	-16	NA	97445988	97436243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97436552_97437190_97437276_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_18422.known	chr10	-	2113	2	FSM	ENSG00000171311.13	ENST00000489158.1	2113	2	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCAATGATTATAGGCAA	-4	True	NA	NA	False	AGTAAA	-2	NA	97446006	97443786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97445848_97445954
transcript_18423.known	chr10	+	1977	12	FSM	ENSG00000171307.19	ENST00000393760.6	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	218.199582610141	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	10	True	NA	22	True	AATAAA	-22	NA	97446174	97457370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_18426.known	chr10	+	1798	11	FSM	ENSG00000171307.19	ENST00000370854.7	1798	11	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_6	149.219435731409	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	5	True	NA	18	True	AATAAA	-18	NA	97446169	97457366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_18427.known	chr10	+	1718	10	FSM	ENSG00000171307.19	ENST00000352634.8	1718	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	116.972720255411	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	37	False	NA	18	True	AATAAA	-18	NA	97446201	97457366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_18429.known	chr10	+	1647	10	FSM	ENSG00000171307.19	ENST00000353979.7	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	199.856059313808	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	-10	True	NA	18	True	AATAAA	-18	NA	97446203	97457366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97453617_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_18431.known	chr10	+	1519	9	FSM	ENSG00000171307.19	ENST00000345745.9	1519	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	181.172569667707	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	-4	True	NA	22	True	AATAAA	-22	NA	97446209	97457370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_18433.known	chr10	+	1280	8	FSM	ENSG00000171307.19	ENST00000370846.8	1280	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	171.629049441652	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACATCCCTTTACTCA	32	False	NA	NA	False	AAGAAA	-24	NA	97446196	97457085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97455601_97455784_97455973_97456045_97456776
transcript_18435.nnic	chr10	+	1027	5	NIC	ENSG00000171307.19	novel	1718	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	238.361463957579	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	33	False	NA	18	True	AATAAA	-18	NA	97446197	97457366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_97446354_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_18437.nic	chr10	-	3635	32	NIC	ENSG00000155229.21	novel	3532	32	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_29	97.7174567452384	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	369	False	NA	-28	True	AATAAA	-16	NA	97498441	97458323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480240_97480358_97480941_97481043_97484102_97484152_97498272
transcript_1844.known	chr1	-	2755	3	FSM	ENSG00000219481.11	ENST00000449853.2	2755	3	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_1	67.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTTCTGGACATAGGT	24	True	NA	-2	True	AATAAA	-25	NA	16613534	16605405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16607692_16608507_16608780_16613337
transcript_18445.known	chr10	-	3499	31	FSM	ENSG00000155229.21	ENST00000438925.7	3499	31	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	51.6576766372197	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-14	True	NA	-28	True	AATAAA	-16	NA	97498422	97458323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_18449.known	chr10	-	3401	30	FSM	ENSG00000155229.21	ENST00000415383.5	3401	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	113.97147983776	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	20	True	NA	-28	True	AATAAA	-16	NA	97498388	97458323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466157_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477405_97477854_97477930_97478303_97478390_97480941_97481043_97498272
transcript_18451.known	chr10	-	3555	30	FSM	ENSG00000155229.21	ENST00000355839.10	3555	30	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_24	81.2786051356339	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	201	False	NA	-30	True	AATAAA	-14	NA	97498609	97458325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_18453.known	chr10	-	3165	29	FSM	ENSG00000155229.21	ENST00000327238.14	3165	29	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	86.5753402581608	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	24	True	NA	-30	True	AATAAA	-14	NA	97498384	97458325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_18461.known	chr10	-	986	6	FSM	ENSG00000155229.21	ENST00000477575.1	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_4	36.4384412399872	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGATGGGGAAAAGGATCC	363	False	NA	NA	False	NA	NA	NA	97498447	97476916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_18463.known	chr10	+	1647	3	FSM	ENSG00000165886.5	ENST00000370664.4	1647	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	12	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTGGCATTTGACTG	-14	True	NA	25	True	AATAAA	-18	NA	97498923	97571206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97499274_97567913_97568142_97570137
transcript_18464.known	chr10	+	4189	9	FSM	ENSG00000155252.13	ENST00000370631.3	4189	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_8	15.4272486205415	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTAGTGCCAAGGGCTT	12	False	NA	NA	False	AATAAA	-18	NA	97640685	97676434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97641178_97650940_97651142_97656284_97656417_97656820_97656975_97662906_97662969_97664884_97664985_97666437_97666572_97667060_97667121_97673580
transcript_18465.known	chr10	+	2442	7	FSM	ENSG00000241935.9	ENST00000370646.9	2442	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.10554159678513	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGTGGCTATATAAAGA	17	True	NA	NA	False	AATAAA	-16	NA	97584388	97612802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97584915_97598774_97598904_97599088_97599217_97599679_97599815_97600066_97600164_97601856_97601991_97611509
transcript_18466.known	chr10	-	2333	5	FSM	ENSG00000171160.18	ENST00000307450.11	2333	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	27.0034719989856	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-2	True	NA	-17	True	AATAAA	-19	NA	97633500	97614554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97616412_97616677_97616788_97617207_97617323_97619586_97619684_97633346
transcript_18469.nnic	chr10	-	2242	4	NIC	ENSG00000171160.18	novel	2333	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_3	77.8588466392869	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-8	True	NA	-17	True	AATAAA	-19	NA	97633506	97614554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_97616412_97616677_97616788_97617207_97617323_97633346
transcript_1847.known	chr1	-	2175	7	FSM	ENSG00000215908.10	ENST00000639594.1	2175	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	45.4107794349413	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTCAGTGTTCTCCTGC	NA	False	NA	-7	True	AATAAA	-23	NA	16631109	16618255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16619104_16619844_16620246_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889
transcript_18471.known	chr10	-	419	2	FSM	ENSG00000171160.18	ENST00000370635.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTAATTCAACCTCCA	7	True	NA	-19	True	AATAAA	-16	NA	97633491	97619409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97619684_97633346
transcript_18473.known	chr10	-	1375	3	FSM	ENSG00000119986.7	ENST00000370626.4	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	18	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTGTGAGTCTGTCAC	-12	True	NA	-2	True	AATAAA	-15	NA	97687241	97677423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97678026_97679618_97679916_97686765
transcript_18476.known	chr10	+	789	3	FSM	ENSG00000155254.13	ENST00000421644.2	789	3	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	248.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAACTTAGCTGTGTACT	744	False	NA	NA	False	NA	NA	NA	97714693	97717479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97715071_97715859_97715986_97717193
transcript_18477.known	chr10	+	3213	2	FSM	ENSG00000155254.13	ENST00000285605.8	3213	2	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTTCTGTCCTG	-22	True	NA	27	True	GATAAA	-21	NA	97713729	97718150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97715986_97717193
transcript_18478.known	chr10	+	3026	13	FSM	ENSG00000155256.18	ENST00000684270.1	3026	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	51.6195349542098	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-29	True	NA	14	True	AATAAA	-16	NA	97737127	97760895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737322_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97752856_97752878_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_1848.known	chr1	-	2575	13	FSM	ENSG00000215908.10	ENST00000639456.1	2575	13	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	36.6563432437007	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGACAAGAGTGTAACTA	0	True	NA	-24	True	AATAAA	-6	NA	16644686	16618272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16619104_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644645
transcript_18480.known	chr10	+	2997	12	FSM	ENSG00000155256.18	ENST00000359980.5	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	36.2799035963256	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	-17	True	NA	14	True	AATAAA	-16	NA	97737139	97760895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_18485.known	chr10	+	2765	10	FSM	ENSG00000155256.18	ENST00000357540.8	2765	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	44.0983748755741	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	-36	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737322_97738476_97738675_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_18487.known	chr10	+	512	2	FSM	ENSG00000155256.18	ENST00000462887.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCAGCCCAGGAGAGGC	26	True	NA	NA	False	NA	NA	NA	97737182	97738845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737326_97738476
transcript_18488.known	chr10	+	2927	11	FSM	ENSG00000155256.18	ENST00000337540.11	2927	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.1722132858625	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	-36	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737322_97738476_97738650_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_18489.known	chr10	-	1883	3	FSM	ENSG00000120057.5	ENST00000266066.4	1883	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGGACCAGGTGGTT	0	True	NA	-5	True	ATTAAA	-17	NA	97771999	97766750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97767861_97769667_97769746_97771304
transcript_18490.nic	chr10	+	3519	11	NIC	ENSG00000166024.14	novel	3393	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	45.1734435260364	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	-4	True	NA	17	True	ATTAAA	-17	NA	98134624	98244894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_98134707_98156092_98156148_98162882_98162976_98163292_98163398_98186466_98186564_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_18491.known	chr10	+	3393	10	FSM	ENSG00000166024.14	ENST00000298999.8	3393	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	37.8388395405802	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGGTGTTTGTTGGT	-13	True	NA	20	True	ATTAAA	-20	NA	98134656	98244897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_98134707_98156092_98156148_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_18493.nnic	chr10	+	3364	9	NIC	ENSG00000166024.14	novel	3393	10	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_1	27.4883498049628	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	-1	True	NA	17	True	ATTAAA	-17	NA	98134627	98244894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_98134707_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_18495.nic	chr10	+	3271	8	NIC	ENSG00000166024.14	novel	3372	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	30.6334484390071	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	-1	True	NA	17	True	ATTAAA	-17	NA	98134627	98244894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_98134707_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_1850.nnic	chr1	-	566	4	NNC	ENSG00000283773.1	novel	166	2	NA	NA	-1572	7726	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	22.5289936649544	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTTTGTAAGT	5	True	NA	NA	False	AAAAAG	-10	NA	16644681	16635040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_16635169_16642766_16642851_16643027_16643146_16644445
transcript_18503.known	chr10	+	3372	9	FSM	ENSG00000166024.14	ENST00000370584.7	3372	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	45.3277991413658	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCACTGTGGTGTTTGTT	-5	True	NA	17	True	ATTAAA	-17	NA	98134623	98244894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_98134707_98163292_98163398_98186466_98186564_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_18505.known	chr10	-	2023	16	FSM	ENSG00000119943.13	ENST00000370575.5	2023	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	2.80158685192676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGCTTGTATTTTTT	-11	True	NA	-2	True	ATTAAA	-19	NA	98415182	98383567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98383869_98384946_98385068_98387200_98387308_98388353_98388509_98390597_98390755_98391009_98391083_98392431_98392567_98392941_98393084_98395195_98395294_98395390_98395453_98397344_98397499_98400101_98400258_98407581_98407656_98407903_98407998_98410938_98410959_98415008
transcript_1851.nnic	chr1	-	496	4	NNC	ENSG00000283773.1	novel	166	2	NA	NA	-1567	7726	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	12.9185482500507	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTTTGTAAGT	10	True	NA	NA	False	AAAAAG	-10	NA	16644676	16635040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_16635169_16642766_16642851_16643027_16643146_16644510
transcript_18512.known	chr10	-	501	3	FSM	ENSG00000119943.13	ENST00000494941.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTACCCGAGTGATT	5832	False	NA	NA	False	AATAAA	-23	NA	98415058	98413947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98414296_98414731_98414835_98415008
transcript_18513.known	chr10	-	279	2	FSM	ENSG00000119943.13	ENST00000462874.1	279	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAGATACTCAACACTCA	13	True	NA	NA	False	NA	NA	NA	98415158	98414166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98414296_98415008
transcript_18515.known	chr10	-	3703	20	FSM	ENSG00000107521.20	ENST00000361490.9	3703	20	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	85.5003847328986	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGCAGAGATGCTCACA	-13	True	NA	-4	True	AATAAA	-30	NA	98446935	98416197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445405_98446806
transcript_1852.nic	chr1	-	404	4	ISM	ENSG00000215908.10	ENST00000639456.1	2575	13	-33	16768	-33	-5371	5prime_fragment	FALSE	canonical	3	47	junction_1	6.59966329107444	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTTTGTAAGT	741	False	NA	NA	False	AAAAAG	-10	NA	16644719	16635040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_16635169_16642766_16642851_16643027_16643146_16644645
transcript_18524.known	chr10	-	1580	10	FSM	ENSG00000107521.20	ENST00000338546.9	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	108.331794860871	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAATGGTTGAGGTGTG	9	True	NA	98	True	AATAAA	-16	NA	98446913	98429150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_1855.nnic	chr1	-	482	3	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	2	-5371	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	29.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTTTGTAAGT	5	True	NA	NA	False	AAAAAG	-10	NA	16644681	16635040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_16635169_16643027_16643146_16644445
transcript_1856.nnic	chr1	-	412	3	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	-4	-5371	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_2	19	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTTTGTAAGT	10	True	NA	NA	False	AAAAAG	-10	NA	16644676	16635040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_16635169_16643027_16643146_16644510
transcript_18566.known	chr10	-	922	4	FSM	ENSG00000107521.20	ENST00000465957.1	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	119.618839095966	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAAGGAATATATC	-5	True	NA	-29	True	NA	NA	NA	98446927	98442387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98442958_98443123_98443241_98445299_98445414_98446806
transcript_1857.nnic	chr1	-	320	3	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-33	-5371	combination_of_known_splicesites	FALSE	canonical	3	63	junction_2	0.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAATTTTGTAAGT	741	False	NA	NA	False	AAAAAG	-10	NA	16644719	16635040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_16635169_16643027_16643146_16644645
transcript_18577.nnic	chr10	-	938	4	NNC	ENSG00000107521.20	novel	922	4	NA	NA	-2	-132	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	183.967992385149	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAACGTAAGCTGAACAC	7	True	NA	NA	False	NA	NA	NA	98446915	98442519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_98442958_98443123_98443241_98445299_98445414_98446646
transcript_18580.known	chr10	+	1058	3	FSM	ENSG00000287261.2	ENST00000660697.2	1122	3	59	5	30	-3	multi-exon	FALSE	canonical	1	2	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAGTTATGAAATTCAAT	15	True	NA	98	True	AATATA	-16	NA	98446345	98453805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_98446762_98449346_98449382_98453198
transcript_1859.nnic	chr1	-	212	2	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-33	-5361	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	741	False	NA	NA	False	AAAAAG	-20	NA	16644719	16635030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_16635169_16644645
transcript_18590.known	chr10	-	1978	9	FSM	ENSG00000120053.12	ENST00000370508.7	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	24.3515913237718	1752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTGATTTTATGAC	20	True	NA	-11	True	AATAAA	-20	NA	99430624	99396869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99397687_99402579_99402723_99403468_99403635_99403723_99403875_99405755_99405861_99406136_99406250_99406725_99406850_99420623_99420806_99430447
transcript_1860.known	chr1	-	164	1	FSM	ENSG00000207513.1	ENST00000384782.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	16666948	16666784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16666800_16666900
transcript_18603.nic	chr10	+	1116	4	FSM	ENSG00000224934.6	ENST00000692010.1	1123	4	-18	25	-10	0	multi-exon	FALSE	canonical	2	7	junction_3	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	NA	False	NA	-6	True	AATAAA	-1	NA	99430904	99438098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99431266_99433545_99433632_99433739_99433941_99437630
transcript_18609.nic	chr10	+	1224	3	FSM	ENSG00000224934.6	ENST00000689675.1	1221	3	-20	17	-10	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	NA	False	NA	-6	True	AATAAA	-1	NA	99430904	99438098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99431266_99433545_99433941_99437630
transcript_18610.known	chr10	-	1526	4	FSM	ENSG00000155287.11	ENST00000370495.6	1526	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	20.8859335970941	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTCATTGGGTTTGTCT	0	True	NA	NA	False	AATAAA	-17	NA	99620439	99610521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99611367_99612542_99612600_99613695_99613925_99620044
transcript_18612.known	chr10	+	864	1	FSM	ENSG00000260475.1	ENST00000566847.1	864	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCACCTCCCATCCCCTG	205	False	NA	NA	False	AATAAA	-22	NA	99621054	99621918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99621100_99621900
transcript_18614.known	chr10	+	8548	13	FSM	ENSG00000198018.7	ENST00000370489.5	8548	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.51280789419331	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCATGAGTTGCTACT	15	True	NA	25	True	AATAAA	-33	NA	99659508	99711241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99659589_99659861_99659965_99661445_99661629_99679260_99679467_99679724_99679876_99685791_99685896_99688693_99688751_99691384_99691519_99695955_99696123_99698533_99698859_99700972_99701059_99702511_99702674_99704451
transcript_18617.nnic	chr10	+	1356	9	NNC	ENSG00000119929.13	novel	1332	9	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	103.460665834896	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	99732156	99756134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_99732357_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_18618.known	chr10	+	1332	9	FSM	ENSG00000119929.13	ENST00000370476.10	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	47.2253573305698	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	-32	True	NA	NA	False	AATAAA	-17	NA	99732233	99756134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99732410_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_1862.known	chr1	+	6660	37	FSM	ENSG00000058453.17	ENST00000375541.10	6660	37	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	42.1381015087941	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTACAGCTGTGTCCCT	-1	True	NA	28	True	TTTAAA	-4	NA	16921930	16972964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16922079_16922662_16922799_16924324_16924480_16929845_16930032_16930123_16930208_16930285_16930348_16930428_16930595_16931290_16931398_16936636_16936874_16937640_16937738_16938399_16938484_16938908_16939143_16939893_16940094_16944099_16944283_16945461_16945607_16946258_16946406_16946760_16946992_16948330_16948525_16948798_16948927_16950952_16951123_16953301_16953482_16954222_16954358_16954733_16954878_16955311_16955551_16955996_16956157_16958582_16958751_16960757_16961131_16965722_16965893_16965998_16966120_16966407_16966572_16968202_16968419_16969115_16969341_16969784_16969935_16970252_16970454_16970635_16970768_16971464_16971648_16972359
transcript_18622.known	chr10	-	5030	9	FSM	ENSG00000014919.13	ENST00000016171.6	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	27.1247119800377	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	-20	True	NA	NA	False	ATTAAA	-18	NA	99732127	99710867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99714719_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_18623.known	chr10	-	2788	9	FSM	ENSG00000014919.13	ENST00000370483.9	2788	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	65.9014415623816	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTATTTCCTTATAG	7	True	NA	0	True	AATAAA	-20	NA	99732100	99711843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99713480_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_18644.known	chr10	-	837	3	FSM	ENSG00000229278.3	ENST00000452391.2	837	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGGCAACTAA	-19	True	NA	NA	False	NA	NA	NA	99659284	99651594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99652211_99653824_99653906_99659144
transcript_18647.nnic	chr10	-	362	3	NNC	ENSG00000229278.3	novel	837	3	NA	NA	-20	-394	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.5	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGTAGCCTTGAAATTT	NA	False	NA	NA	False	TATAAA	-19	NA	99659304	99651988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_99652211_99653824_99653906_99659245
transcript_18649.nnic	chr10	+	644	3	NNC	ENSG00000023839.12	novel	5806	32	NA	NA	4566	-231	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	8	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCGATTGTCTACCTCG	6635	False	NA	NA	False	AATAAA	-22	NA	99850314	99851813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_99850452_99850601_99850797_99851501
transcript_18651.nnic	chr10	+	1425	3	NNC	ENSG00000023839.12	novel	5806	32	NA	NA	4566	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	8	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGCCTAAGTTGACCG	6635	False	NA	27	True	NA	NA	NA	99850314	99852594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_99850452_99850601_99850797_99851501
transcript_18652.nic	chr10	+	787	2	ISM	ENSG00000023839.12	ENST00000648523.1	1121	5	4573	231	4573	-231	3prime_fragment	FALSE	canonical	3	19	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCGATTGTCTACCTCG	6642	False	NA	NA	False	AATAAA	-22	NA	99850321	99851813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_99850797_99851501
transcript_18654.nic	chr10	+	1494	2	ISM	ENSG00000023839.12	ENST00000648523.1	1121	5	4647	-550	4647	0	3prime_fragment	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGGCCTAAGTTGACCG	6716	False	NA	27	True	NA	NA	NA	99850395	99852594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_99850797_99851501
transcript_18655.known	chr10	-	4178	14	FSM	ENSG00000107554.17	ENST00000543621.6	4178	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_13	29.9650684204756	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	NA	False	NA	-5	True	AATAAA	-16	NA	99914082	99875576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99913952
transcript_18660.known	chr10	-	6428	17	FSM	ENSG00000107554.17	ENST00000324109.9	6428	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_16	43.7785621052131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	-38	True	NA	-5	True	AATAAA	-16	NA	100009947	99875576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99955213_99957206_99969114_99969238_99971979_99972135_100009837
transcript_18662.nnic	chr10	-	812	4	NNC	ENSG00000107554.17	novel	4178	14	NA	NA	-18	-20548	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	64.9632374672185	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTAAAACATTCATCT	NA	False	NA	NA	False	AATACA	-23	NA	99914100	99906951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_99907322_99907994_99908095_99908952_99909147_99913952
transcript_18663.nnic	chr10	-	514	4	NNC	ENSG00000107554.17	novel	6428	17	NA	NA	4	-79095	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	31.5946549628608	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATGTGAGATAATGTTT	-34	True	NA	NA	False	NA	NA	NA	100009943	99965498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_99965629_99969114_99969238_99971979_99972135_100009837
transcript_18665.nnic	chr10	-	888	6	NNC	ENSG00000120054.12	novel	1855	9	NA	NA	114	-117	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	0.4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAATGGTCTCCATCTG	145	False	NA	NA	False	AATACA	-17	NA	100065280	100042309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065127
transcript_18666.known	chr10	-	1855	9	FSM	ENSG00000120054.12	ENST00000370418.8	1855	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	0.7806247497998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTTTGGGAGGCCGAG	-16	True	NA	NA	False	NA	NA	NA	100081869	100042192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065187_100065371_100069713_100069870_100075910_100076108_100081402
transcript_1867.known	chr1	+	164	1	FSM	ENSG00000207389.1	ENST00000384659.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	16740515	16740679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16740500_16740700
transcript_18670.nic	chr10	-	3212	12	NIC	ENSG00000107566.14	novel	1453	12	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	141	junction_11	84.1162124092772	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTGTTTTTTTTTC	6	True	NA	-4	True	AATAAA	-16	NA	100186020	100150093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_18671.known	chr10	-	1453	12	FSM	ENSG00000107566.14	ENST00000407654.7	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_11	74.0261289585984	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGATCTGTTGAATAAT	-7	True	NA	NA	False	AATATA	-22	NA	100186033	100151807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185961
transcript_18681.known	chr10	-	962	11	FSM	ENSG00000107566.14	ENST00000370408.2	962	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_10	87.7630901917201	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGCTCCCTGGCCAC	-3	True	NA	NA	False	NA	NA	NA	100186029	100154859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_18685.nic	chr10	-	2019	15	NIC	ENSG00000095485.18	novel	2591	14	NA	NA	-9	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	46.3903139080756	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAGTGTCTTGTGTTCA	NA	False	NA	-6	True	AATGAA	-22	NA	100267689	100232298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_100232488_100233109_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_18691.known	chr10	-	2591	14	FSM	ENSG00000095485.18	ENST00000354105.10	2591	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	24.8360303262591	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-2	True	NA	-5	True	AATGAA	-23	NA	100267638	100232297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_18717.known	chr10	-	2634	5	FSM	ENSG00000196072.12	ENST00000614731.4	2634	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	255.035291675486	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATCTTGTCTTTAT	9048	False	NA	NA	False	ATTAAA	-30	NA	100286378	100273279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286300
transcript_18726.known	chr10	-	425	3	FSM	ENSG00000196072.12	ENST00000361832.2	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	284	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAATAATATTTGTAA	11	True	NA	NA	False	TATAAA	-36	NA	100286673	100280933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100281054_100286096_100286333_100286604
transcript_18727.known	chr10	-	2790	16	FSM	ENSG00000107593.17	ENST00000318222.4	2790	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.15470053837925	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACTTTGCATTTGCTT	-2	True	NA	-11	True	AATAAA	-15	NA	100330228	100288148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100288479_100288971_100289057_100290014_100290139_100290400_100290520_100291300_100291428_100292947_100293070_100293280_100293380_100294534_100294656_100294941_100295124_100296121_100296293_100296979_100297209_100297381_100297607_100298561_100298816_100299590_100299719_100329210_100329325_100329868
transcript_18733.known	chr10	+	5245	6	FSM	ENSG00000099194.6	ENST00000370355.3	5245	6	0	0	0	0	multi-exon	FALSE	canonical	3	3705	junction_3	228.074899978055	2382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGGTCTGGGAGTT	-9	True	NA	24	True	AATAAA	-17	NA	100347232	100364826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100347532_100348063_100348347_100352365_100352497_100354426_100354633_100356531_100356765_100360733
transcript_18740.known	chr10	+	1752	4	FSM	ENSG00000235823.4	ENST00000666713.1	1752	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	19.3448241713959	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	34	False	NA	17	True	TTTAAA	-14	NA	100373565	100383372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100382427
transcript_18741.known	chr10	+	1125	4	FSM	ENSG00000235823.4	ENST00000666045.1	1125	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	24.9977776790036	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	36	False	NA	22	True	AATAAA	-22	NA	100373567	100388360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388040
transcript_18743.known	chr10	+	1173	4	FSM	ENSG00000235823.4	ENST00000665755.1	1173	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	70.7358152250722	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-2	True	NA	22	True	AATAAA	-22	NA	100373591	100388360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374081_100380982_100381110_100381215_100381449_100388036
transcript_18745.known	chr10	+	1209	4	FSM	ENSG00000235823.4	ENST00000665022.1	1209	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	25.694789787469	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	40	False	NA	22	True	AATAAA	-22	NA	100373571	100388360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374013_100380894_100381110_100381215_100381449_100388040
transcript_18751.known	chr10	+	992	3	FSM	ENSG00000235823.4	ENST00000661096.1	992	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.5	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	44	False	NA	22	True	AATAAA	-22	NA	100373575	100388360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374017_100381221_100381449_100388036
transcript_18752.known	chr10	+	2726	3	FSM	ENSG00000235823.4	ENST00000656449.1	2726	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	39	False	NA	17	True	TTTAAA	-14	NA	100373570	100383372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374013_100380982_100381110_100381215
transcript_18756.known	chr10	+	1070	3	FSM	ENSG00000235823.4	ENST00000666154.1	1070	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	36	False	NA	22	True	AATAAA	-22	NA	100373567	100388360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374081_100381215_100381449_100388036
transcript_18757.known	chr10	+	1124	3	FSM	ENSG00000235823.4	ENST00000654563.1	1124	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	85	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	36	False	NA	22	True	AATAAA	-22	NA	100373567	100388360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374135_100381215_100381449_100388036
transcript_18758.known	chr10	+	12927	8	FSM	ENSG00000166135.14	ENST00000299163.7	12927	8	0	0	0	0	multi-exon	TRUE	canonical	3	463	junction_3	52.9065406241641	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTCTCTTTGGAAAAT	1	True	NA	14	True	ATTAAA	-23	NA	100535942	100559998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100536136_100536410_100536662_100540633_100540783_100544950_100545097_100545942_100546050_100546517_100546582_100547139_100547251_100548092
transcript_1876.known	chr1	+	475	2	FSM	ENSG00000228549.5	ENST00000457856.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGATTGAGAGTTGCTTG	NA	False	NA	NA	False	AATAAA	-33	NA	16873038	16874092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16873144_16873722
transcript_1877.known	chr1	-	527	2	FSM	ENSG00000238142.3	ENST00000660464.2	556	2	25	4	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	166	False	NA	-5	True	AATAAA	-27	NA	16889501	16888541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888783_16889215
transcript_18774.known	chr10	-	713	5	FSM	ENSG00000166136.16	ENST00000370322.5	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_4	1298.61965178415	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTCATTTCCC	NA	False	NA	-24	True	AATAAA	-14	NA	100530000	100523742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529857
transcript_18781.known	chr10	-	678	5	FSM	ENSG00000166136.16	ENST00000299166.9	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	2763	junction_1	340.019117109612	18016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-1	True	NA	-21	True	AATAAA	-17	NA	100529871	100523739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529766
transcript_18782.known	chr10	-	390	2	FSM	ENSG00000166136.16	ENST00000464651.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	3	2763	junction_1	0	2880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	3272	False	NA	-21	True	AATAAA	-17	NA	100526598	100523739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100523930_100526398
transcript_18783.nic	chr10	+	1305	5	ISM	ENSG00000119906.13	ENST00000370271.7	2931	6	-38	2640	-38	-2640	5prime_fragment	FALSE	canonical	3	71	junction_4	11.3357840487546	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAAAACATATTGCACT	242	False	NA	NA	False	AAGAAA	-3	NA	100912924	100924120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383_100918442_100923974
transcript_18784.nic	chr10	+	1266	4	ISM	ENSG00000119906.13	ENST00000370271.7	2931	6	-38	8212	-38	4662	5prime_fragment	FALSE	canonical	3	80	junction_1	9.17726659862414	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTGTCTCATATTAATT	242	False	NA	NA	False	AATAAA	-37	NA	100912924	100918548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383
transcript_18786.known	chr10	+	891	1	FSM	ENSG00000119906.13	ENST00000609386.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACTTGGTACTGTCTTTT	29	False	NA	NA	False	AATAAA	-19	NA	100912995	100913886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100913000_100913900
transcript_18787.known	chr10	+	6892	20	FSM	ENSG00000119906.13	ENST00000238961.9	6892	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_16	10.5455088181029	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTTGGTAATATTTG	-4	True	NA	9	True	ATTAAA	-22	NA	100912962	100965134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383_100918442_100923974_100924973_100925948_100926020_100929316_100929440_100929829_100929998_100930975_100931079_100937401_100937478_100938594_100938737_100944025_100944129_100945329_100945507_100947038_100947137_100947759_100947848_100950075_100950208_100950675_100950754_100956450_100956538_100959427_100959497_100961876
transcript_1879.known	chr1	-	346	2	FSM	ENSG00000238142.3	ENST00000457075.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	18	True	NA	-5	True	AATAAA	-27	NA	16889649	16888541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888786_16889547
transcript_18790.known	chr10	+	946	5	FSM	ENSG00000107815.10	ENST00000473656.5	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	43.1074239545812	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCCTGTGGTCCTGA	-3	True	NA	NA	False	CATAAA	-15	NA	100987549	100993580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100987614_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_18792.known	chr10	+	3616	5	FSM	ENSG00000107815.10	ENST00000311916.8	3616	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	14.972892172189	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCTTTTTCT	-10	True	NA	14	True	ACTAAA	-17	NA	100987542	100994403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_18793.known	chr10	+	3665	5	FSM	ENSG00000107815.10	ENST00000370228.2	3665	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	37.5566239164278	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	-17	True	NA	12	True	ACTAAA	-15	NA	100987535	100994401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991055_100993189
transcript_1880.known	chr1	-	1048	1	FSM	ENSG00000238142.3	ENST00000666544.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	78	False	NA	-5	True	AATAAA	-27	NA	16889589	16888541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888500_16889600
transcript_18805.known	chr10	-	903	2	FSM	ENSG00000055950.17	ENST00000477279.1	903	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-33	True	NA	-38	True	AATAAA	-15	NA	100987515	100986275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986976_100987312
transcript_18806.known	chr10	-	2134	5	FSM	ENSG00000055950.17	ENST00000318325.6	2134	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	229.521649305681	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTCTGAGTCTCTTCT	-15	True	NA	-6	True	AATAAA	-16	NA	100987497	100977820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100979373_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_18807.known	chr10	-	747	5	FSM	ENSG00000055950.17	ENST00000299179.9	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	209.58590124338	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-12	True	NA	-8	True	AGTAAA	-18	NA	100987494	100981375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100981544_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_18808.known	chr10	-	894	6	FSM	ENSG00000055950.17	ENST00000342071.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	217.448476655966	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCCAGGCTCTGTG	-33	True	NA	-9	True	AGTAAA	-17	NA	100987515	100981376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100981544_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_18809.known	chr10	-	727	6	FSM	ENSG00000055950.17	ENST00000448244.5	727	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	223.161466207766	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	49	False	NA	-8	True	AGTAAA	-18	NA	100987433	100981375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100981544_100983754_100983818_100984033_100984075_100986748_100986976_100987089_100987197_100987312
transcript_1881.known	chr1	+	164	1	FSM	ENSG00000207005.1	ENST00000384278.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTGGAGTTTCTAAAA	NA	False	NA	NA	False	NA	NA	NA	16895979	16896143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16896000_16896100
transcript_18810.known	chr10	-	1010	3	FSM	ENSG00000055950.17	ENST00000318364.13	999	3	-18	7	0	0	multi-exon	FALSE	canonical	3	470	junction_1	19.5	5561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-33	True	NA	-38	True	AATAAA	-15	NA	100987515	100986275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986976_100987089_100987197_100987312
transcript_18811.known	chr10	-	798	4	FSM	ENSG00000055950.17	ENST00000370234.4	798	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	225.658050057062	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACATTTCAGGTCTGTCT	-1	True	NA	-42	True	AATAAA	-11	NA	100987483	100986279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986573_100986748_100986976_100987089_100987197_100987312
transcript_18812.known	chr10	-	897	2	FSM	ENSG00000055950.17	ENST00000493646.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_1	0	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	196	False	NA	-38	True	AATAAA	-15	NA	100987286	100986275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986976_100987089
transcript_18813.known	chr10	-	866	4	FSM	ENSG00000055950.17	ENST00000370236.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	222.366564233225	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-1	True	NA	-36	True	AATAAA	-17	NA	100987483	100986273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986573_100986686_100986976_100987089_100987197_100987312
transcript_18814.known	chr10	-	810	2	FSM	ENSG00000055950.17	ENST00000487059.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCTTTCCAGTGCCT	-31	True	NA	NA	False	AATGAA	-7	NA	100987513	100986587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100987197_100987312
transcript_18815.known	chr10	+	2883	5	FSM	ENSG00000107816.17	ENST00000370223.7	2883	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	202.421589757615	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	5	True	NA	NA	False	ATTAAA	-25	NA	100997071	101007836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100997235_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_18818.nic	chr10	-	1448	3	ISM	ENSG00000186862.20	ENST00000474125.7	4306	13	-44	15279	-5	39	5prime_fragment	FALSE	canonical	2	9	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	-26	True	NA	NA	False	NA	NA	NA	101031149	101023088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_101024069_101029993_101030385_101031072
transcript_18819.known	chr10	-	977	1	FSM	ENSG00000273162.1	ENST00000609242.1	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTAGAAGGGAGTTTT	6674	False	NA	NA	False	ATTAAA	-20	NA	101061005	101060028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101060000_101061000
transcript_1882.known	chr1	-	438	1	FSM	ENSG00000272426.1	ENST00000606899.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCCTTTAGATGAAAAG	56	False	NA	NA	False	AATAAA	-21	NA	16904776	16904338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16904300_16904800
transcript_18821.known	chr10	+	665	1	FSM	ENSG00000107821.15	ENST00000608812.1	665	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTATTCACCGCAAATAAA	10	True	NA	NA	False	AATAAA	-18	NA	101066394	101067059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101066400_101067100
transcript_18826.known	chr10	+	6024	15	FSM	ENSG00000166167.18	ENST00000370187.8	6024	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	30.6454377867711	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGCGTCTTGTCTC	35	True	NA	16	True	ATTAAA	-6	NA	101354164	101557313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101354229_101430344_101430453_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_18829.nnic	chr10	+	2991	15	NNC	ENSG00000166167.18	novel	6024	15	NA	NA	-13	3033	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	60.2428757749217	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGGTAAGGCTCAGCCT	-36	True	NA	9	True	AATAAA	-23	NA	101354093	101554224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_101354229_101407440_101407534_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_18831.known	chr10	+	5982	14	FSM	ENSG00000166167.18	ENST00000408038.6	5982	14	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	30.7555738922847	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTTGTCTCCTTGCCCC	-23	True	NA	24	True	ATTAAA	-14	NA	101354106	101557321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101354229_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_18840.nnic	chr10	+	1205	3	NNC	ENSG00000166167.18	novel	527	5	NA	NA	-8	-84434	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	46.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATATGTACATTATTTG	-31	True	NA	NA	False	AATAAA	-19	NA	101354098	101437278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_101354229_101430344_101430453_101436311
transcript_18842.known	chr10	+	527	5	FSM	ENSG00000166167.18	ENST00000475200.5	527	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.9756454990798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAACTGTGTGTCAAAT	18	False	NA	NA	False	NA	NA	NA	101354068	101521712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101354229_101430344_101430453_101461963_101462059_101479367_101479458_101521638
transcript_18844.known	chr10	-	2781	9	FSM	ENSG00000166169.17	ENST00000370162.8	2781	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	25.4054620111503	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-51	True	NA	-5	True	AGTAAA	-18	NA	101588257	101578881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587821
transcript_18845.known	chr10	-	2670	9	FSM	ENSG00000166169.17	ENST00000299206.8	2670	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	20.3803673911929	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-3	True	NA	-5	True	AGTAAA	-18	NA	101588209	101578881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587884
transcript_18855.known	chr10	+	641	7	FSM	ENSG00000166171.13	ENST00000370147.5	641	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	218.585350734114	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGACTGCAAGACCCA	20	True	NA	NA	False	ACTAAA	-26	NA	101588324	101609447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866_101608938_101609366
transcript_18870.known	chr10	+	819	6	FSM	ENSG00000166171.13	ENST00000370151.9	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_2	25.5859336354959	3072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGACTGCCCTCTTGTTC	16	True	NA	32	True	AGTAAA	-24	NA	101588320	101609662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101608834_101608938_101609366
transcript_18878.known	chr10	-	1953	6	FSM	ENSG00000166169.17	ENST00000628479.2	1953	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	33.9234432214656	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTGGTGTCTGAGC	NA	False	NA	-7	True	AGTAAA	-16	NA	101588270	101578883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101587884
transcript_18880.known	chr10	-	784	6	FSM	ENSG00000166169.17	ENST00000429502.1	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	35.9833294735215	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGCGAGTTTGCCTGTGC	-26	True	NA	NA	False	NA	NA	NA	101588232	101579695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101588203
transcript_1891.known	chr1	-	1045	9	FSM	ENSG00000117122.14	ENST00000375535.4	1045	9	0	0	0	0	multi-exon	FALSE	canonical	3	4186	junction_8	418.305790510961	7055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	14	True	NA	NA	False	ATTAAA	-18	NA	16980620	16974501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236_16978315_16980586
transcript_18918.known	chr10	-	2360	8	FSM	ENSG00000166169.17	ENST00000370169.5	2360	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	14.5546121450857	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	785	False	NA	-5	True	AGTAAA	-18	NA	101587421	101578881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245
transcript_18919.known	chr10	-	2289	5	FSM	ENSG00000166169.17	ENST00000339310.7	2289	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	33.4439830163813	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	80	False	NA	-5	True	AGTAAA	-18	NA	101588126	101578881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245
transcript_1892.known	chr1	-	970	8	FSM	ENSG00000117122.14	ENST00000375534.7	970	8	0	0	0	0	multi-exon	FALSE	canonical	3	801	junction_7	1539.79096116377	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	3332	False	NA	NA	False	ATTAAA	-18	NA	16978276	16974501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977196_16978236
transcript_18920.known	chr10	-	2482	9	FSM	ENSG00000107829.15	ENST00000664783.1	2482	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	30.6693556339223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGGTTCCTCACTGGC	NA	False	NA	-5	True	AATAAA	-15	NA	101695259	101610666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101611411_101611627_101611770_101612336_101612478_101624744_101624811_101667885_101667981_101672914_101673048_101673487_101673674_101676340_101676437_101694380
transcript_18921.nic	chr10	-	1815	9	NIC	ENSG00000107829.15	novel	2394	9	NA	NA	-155	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	40.0085928270415	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGTTCCTCACTGGCT	NA	False	NA	-4	True	AATAAA	-16	NA	101695450	101610665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_101611411_101611627_101611770_101612336_101612478_101624744_101624811_101667885_101667981_101672914_101673048_101673487_101673674_101676340_101676437_101695239
transcript_18922.nnic	chr10	-	1452	6	NNC	ENSG00000107829.15	novel	2394	9	NA	NA	8230	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	37.6935007660472	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGTTCCTCACTGGCT	0	True	NA	-4	True	AATAAA	-16	NA	101668484	101610665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_101611411_101611627_101611770_101612336_101612478_101624744_101624811_101667885_101667981_101668221
transcript_18929.known	chr10	-	755	5	FSM	ENSG00000107833.10	ENST00000474993.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	19.1702895126808	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGCTCTTGTGTGGC	6311	False	NA	-14	True	AATAAA	-13	NA	101783384	101781331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101783272
transcript_18937.known	chr10	-	877	6	FSM	ENSG00000107833.10	ENST00000370110.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	4.42718872423573	4554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTGGCTTCTTCC	-9	True	NA	-7	True	AATAAA	-20	NA	101783413	101781324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
transcript_18938.known	chr10	-	5174	16	FSM	ENSG00000198408.14	ENST00000361464.8	5174	16	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_2	245.071327485603	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCGTGTTGTATTGT	-2	True	NA	-13	True	AATAAA	-13	NA	101818444	101784449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_18941.known	chr10	-	5043	15	FSM	ENSG00000198408.14	ENST00000439817.5	5043	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	336.575438067314	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTGTATTGTGTGAATC	NA	False	NA	-6	True	AATAAA	-20	NA	101818465	101784442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_18942.nnic	chr10	-	1138	8	NNC	ENSG00000120049.20	novel	2089	8	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.04504457482169	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCCGTCTCTGCCTT	-18	True	NA	-5	True	AATAAA	-17	NA	101839874	101825973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_101826448_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_18943.known	chr10	-	2089	8	FSM	ENSG00000120049.20	ENST00000348850.9	2089	8	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	2.43276948084663	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCCGTCTCTGCCTT	-16	True	NA	-5	True	AATAAA	-17	NA	101839872	101825973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101827401_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_18947.known	chr10	+	1234	3	FSM	ENSG00000226009.2	ENST00000412353.2	1234	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTCTACAGGCGCCA	-5	True	NA	NA	False	AATAAA	-16	NA	101818799	101828885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101819249_101827859_101827940_101828180
transcript_18952.known	chr10	-	4099	26	FSM	ENSG00000120029.13	ENST00000370033.9	4099	26	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_5	19.9798298291052	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGTTGCTTTTTTTTT	-17	True	NA	-3	True	ATTAAA	-23	NA	102056173	101845598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101847621_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102001970_102002073_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_18958.nnic	chr10	-	711	6	NNC	ENSG00000120029.13	novel	724	5	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.0714821212402	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	29	False	NA	-4	True	AATAAA	-20	NA	102056217	102029447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_102029601_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_18968.known	chr10	-	724	5	FSM	ENSG00000120029.13	ENST00000311122.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	16.0526477566786	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	-37	True	NA	-4	True	AATAAA	-20	NA	102056193	102029447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_18969.nnic	chr10	-	644	5	NNC	ENSG00000120029.13	novel	724	5	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	58.2752091373339	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	29	False	NA	-4	True	AATAAA	-20	NA	102056217	102029447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_102029746_102033129_102033173_102033282_102033340_102040012_102040126_102056084
transcript_1898.known	chr1	-	1015	8	FSM	ENSG00000117118.10	ENST00000375499.8	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_4	37.320454532744	4899	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTTCCTTTACTTGC	-2	True	NA	18	True	AATAAA	-31	NA	17054032	17018721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_17018959_17022607_17022731_17023972_17024075_17027748_17027866_17028599_17028737_17033059_17033146_17044760_17044889_17053947
transcript_18980.known	chr10	+	3217	9	FSM	ENSG00000166197.17	ENST00000603946.5	3217	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	444.154657045268	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	12	False	NA	11	True	AATAAA	-16	NA	102152403	102163866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102152531_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_18983.known	chr10	+	3723	13	FSM	ENSG00000166197.17	ENST00000605788.6	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_2	234.427968088755	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	-3	True	NA	15	True	AATAAA	-20	NA	102152388	102163870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_18984.known	chr10	+	2441	13	FSM	ENSG00000166197.17	ENST00000488254.6	2441	13	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_2	231.493145446877	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGTGATTTTCAAA	12	False	NA	5	True	ATTAAA	-15	NA	102152403	102162600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_18985.known	chr10	+	660	4	FSM	ENSG00000166197.17	ENST00000477977.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	624.152937098664	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	1447	False	NA	11	True	AATAAA	-16	NA	102160729	102163866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102161094_102161555_102161663_102161832_102161926_102163770
transcript_18986.known	chr10	+	1400	4	FSM	ENSG00000119915.5	ENST00000370005.4	1400	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGAGTTGGGGGATTT	-1	True	NA	NA	False	ATTAAA	-14	NA	102226298	102229589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102226650_102227625_102227758_102228416_102228569_102228824
transcript_1899.known	chr1	-	1607	11	FSM	ENSG00000117115.13	ENST00000375481.1	1607	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	5.9464274989274	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTGTATAATGAGATT	4146	False	NA	0	True	AATAAA	-20	NA	17119435	17079030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
transcript_18990.known	chr10	+	1634	12	FSM	ENSG00000077150.20	ENST00000467116.5	1634	12	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_1	8.57152695732594	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTGG	-5	True	NA	NA	False	NA	NA	NA	102395705	102399218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102395797_102395887_102395981_102396252_102396335_102396448_102396490_102396724_102396824_102396903_102397056_102397301_102397409_102397526_102397686_102397980_102398086_102398211_102398298_102398384_102398524_102398738
transcript_18995.nnic	chr10	+	954	5	NNC	ENSG00000107872.14	novel	1340	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	82.8322853723112	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	-8	True	NA	26	True	AATAAA	-16	NA	102420827	102423136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_102420958_102421051_102421183_102421353_102421508_102422086_102422293_102422803
transcript_18997.known	chr10	+	1340	4	FSM	ENSG00000107872.14	ENST00000369956.8	1340	4	0	0	0	0	multi-exon	TRUE	canonical	3	134	junction_2	39.2513269414763	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	0	True	NA	26	True	AATAAA	-16	NA	102420835	102423136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102421183_102421353_102421508_102421786_102422293_102422803
transcript_19.known	ERCC-00044	+	1149	1	FSM	ERCC-00044A	DQ459424	1149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	0	1149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00044_+_0_1100
transcript_19015.known	chr10	-	1100	9	FSM	ENSG00000107874.11	ENST00000369937.5	1100	9	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_4	46.8341488659717	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGTGCATTCTGGTC	19	True	NA	-8	True	AGTAAA	-15	NA	102432574	102423248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102423573_102423656_102423718_102423797_102423860_102423995_102424179_102424263_102424395_102424498_102424561_102424648_102424793_102425114_102425199_102432525
transcript_19016.known	chr10	-	896	3	FSM	ENSG00000107874.11	ENST00000465409.1	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_2	13	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCATTCTGGTCATTT	8361	False	NA	-4	True	AGTAAA	-19	NA	102424304	102423244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102423573_102423656_102423718_102423797
transcript_19017.known	chr10	+	1483	5	FSM	ENSG00000269609.6	ENST00000663480.1	1483	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	41.9195658374464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACTTGTCTTGTTTT	13	True	NA	-4	True	NA	NA	NA	102449869	102456267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450023_102450186_102450331_102451398_102451556_102452089_102452188_102455336
transcript_19019.nnic	chr10	+	1444	4	NIC	ENSG00000269609.6	novel	1556	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	45.3210767744986	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	-20	True	NA	22	True	AATAAA	-20	NA	102449836	102456293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_102450023_102450186_102450331_102451398_102451556_102455336
transcript_1902.known	chr1	+	3846	16	FSM	ENSG00000142623.11	ENST00000375471.5	3846	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.771722460186015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGTCTACCCAGCCTGT	0	True	NA	11	True	AATAAA	-24	NA	17205127	17246007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_17205310_17222289_17222471_17223620_17223694_17224366_17224429_17225810_17225929_17226032_17226159_17228624_17228798_17228947_17229052_17230084_17230209_17230571_17230680_17232818_17232971_17237313_17237459_17238615_17238710_17239703_17239784_17240634_17240761_17244009
transcript_19020.nnic	chr10	+	1467	4	NNC	ENSG00000269609.6	novel	2068	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	46.5403051128804	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	NA	False	NA	22	True	AATAAA	-20	NA	102449778	102456293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_102450023_102450186_102450331_102452065_102452188_102455336
transcript_19021.nnic	chr10	+	1384	4	NIC	ENSG00000269609.6	novel	1556	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	46.5403051128804	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	-19	True	NA	22	True	AATAAA	-20	NA	102449837	102456293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_102450023_102450186_102450331_102452089_102452188_102455336
transcript_19023.known	chr10	+	1312	3	FSM	ENSG00000269609.6	ENST00000473970.3	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	8	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	NA	False	NA	26	True	AATAAA	-24	NA	102449815	102456297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450023_102450186_102450331_102455336
transcript_19024.known	chr10	+	1178	3	FSM	ENSG00000269609.6	ENST00000669625.1	1178	3	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	52.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	123	False	NA	26	True	AATAAA	-24	NA	102449979	102456297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450023_102450186_102450361_102455336
transcript_19026.known	chr10	+	1162	2	FSM	ENSG00000269609.6	ENST00000670059.1	1162	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	269	False	NA	22	True	AATAAA	-20	NA	102450125	102456293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450331_102455336
transcript_19027.known	chr10	+	1556	5	FSM	ENSG00000269609.6	ENST00000492465.2	1556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	44.4318298070201	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	-4	True	NA	22	True	AATAAA	-20	NA	102449852	102456293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450023_102450186_102450361_102451398_102451556_102452089_102452188_102455336
transcript_19039.known	chr10	+	823	6	FSM	ENSG00000138111.14	ENST00000369931.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.8820653568735	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCACTAATGTGTTT	7	True	NA	11	True	AATAAA	-20	NA	102461412	102472250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102461451_102465981_102466088_102468954_102469198_102469992_102470076_102471272_102471397_102472021
transcript_1904.known	chr1	+	3124	2	FSM	ENSG00000142623.11	ENST00000460293.1	3124	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCTGTCTACCCAGCC	6	False	NA	8	True	AATAAA	-21	NA	17239631	17246004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_17240761_17244009
transcript_19043.known	chr10	+	2852	10	FSM	ENSG00000138111.14	ENST00000238936.8	2852	10	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	7.37864787372622	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTGTGAGTGAG	-11	True	NA	23	True	ATTAAA	-23	NA	102461394	102477045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102461451_102465981_102466088_102468954_102469198_102469992_102470076_102470664_102471118_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
transcript_19044.known	chr10	+	424	2	FSM	ENSG00000138111.14	ENST00000428200.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAACAGAGCGAGACTC	4612	False	NA	NA	False	NA	NA	NA	102466017	102468640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102466088_102468286
transcript_19045.known	chr10	+	442	3	FSM	ENSG00000138111.14	ENST00000469294.1	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTTTCACTAATGTG	2854	False	NA	8	True	AATAAA	-17	NA	102471025	102472247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102471118_102471272_102471397_102472021
transcript_19046.known	chr10	-	2830	11	FSM	ENSG00000138107.13	ENST00000369905.9	2830	11	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	53.0456407256996	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	5	True	NA	-11	True	AATAAA	-22	NA	102502712	102479228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102490548_102490614_102502599
transcript_19047.known	chr10	-	2726	10	FSM	ENSG00000138107.13	ENST00000487599.1	2726	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	273.444737911261	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTCAGCTGGGCCTCTA	-4	True	NA	-19	True	AATAAA	-14	NA	102502678	102479236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102480966_102481131_102481173_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102490548_102490614_102502599
transcript_19056.known	chr10	-	3834	6	FSM	ENSG00000138175.9	ENST00000260746.6	3834	6	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_5	148.070253596055	6405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTGGAATGTGTTGT	14	True	NA	-10	True	AATAAA	-17	NA	102714397	102673730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102676942_102685815_102686002_102689892_102689944_102699372_102699490_102705345_102705490_102714272
transcript_19057.known	chr10	+	6770	12	FSM	ENSG00000156398.13	ENST00000369893.10	6770	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	15.2662323852242	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCCTCTTCAGGAGC	13	True	NA	NA	False	ATTAAA	-18	NA	102714635	102743492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729318_102729395_102729722_102729809_102731722_102731784_102732151_102732219_102732858_102732909_102733553_102733604_102735861_102735910_102737662
transcript_19065.known	chr10	+	4129	4	FSM	ENSG00000166272.18	ENST00000448841.7	4129	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	10.9645894689324	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGCTCTTTCTTGCT	-7	True	NA	19	True	AATAAA	-16	NA	102743947	102816262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102744144_102797992_102798096_102809892_102810055_102812594
transcript_19070.known	chr10	+	1723	13	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	46	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	23.7034631787565	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACATCTTTGAATCAAG	42	False	NA	NA	False	AATAAA	-16	NA	102869515	102901894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890655_102890655_102890679_102900592_102900800_102901474
transcript_19084.known	chr10	+	2450	11	FSM	ENSG00000214435.9	ENST00000369880.8	2450	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	6.62193325245732	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGAATCAAGTATCT	-4	True	NA	NA	False	AATAAA	-21	NA	102869469	102901899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_1909.known	chr1	-	4040	13	FSM	ENSG00000179051.14	ENST00000375436.9	4040	13	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_12	146.748367395802	2373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTTTGCATTTCTTTT	-7	True	NA	-15	True	AATAAA	-21	NA	17439677	17406759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_17409195_17409973_17410052_17412121_17412195_17413072_17413179_17413536_17413718_17416479_17416647_17420713_17420829_17422202_17422292_17422704_17422837_17425540_17425685_17429105_17429200_17438229_17438523_17439544
transcript_1910.known	chr1	+	1841	3	FSM	ENSG00000117148.8	ENST00000375406.2	1841	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGTGATGGAT	-16	True	NA	7	True	AATAAA	-19	NA	17755332	17827063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_17755505_17822984_17823357_17825766
transcript_19105.nnic	chr10	+	1589	9	NIC	ENSG00000214435.9	novel	2450	11	NA	NA	148	-796	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	18.6530828551208	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAGAAAGAAA	45	False	NA	NA	False	NA	NA	NA	102869617	102901103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_102869846_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_19112.known	chr10	+	838	6	FSM	ENSG00000166275.16	ENST00000369883.3	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	23.6186367091752	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTCATATTGTTATTG	-7	True	NA	NA	False	AATAAA	-23	NA	102854261	102864213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872_102862933_102863729
transcript_19119.known	chr10	+	2386	5	FSM	ENSG00000166275.16	ENST00000339834.10	2386	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	4.94974746830583	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTAGGGATAGAGTGGAA	-10	True	NA	NA	False	AAGAAA	-22	NA	102854258	102864961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872
transcript_1912.nnic	chr1	+	1651	10	NNC	ENSG00000117154.12	novel	1885	6	NA	NA	-299	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.9977365828223	75	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	1	True	NA	16	True	ATTAAA	-23	NA	18107498	18378483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_18107659_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365222_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_19134.nic	chr10	-	3449	19	NIC	ENSG00000076685.19	novel	3614	21	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_13	108.726409389648	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	3941	False	NA	-9	True	AATAAA	-15	NA	103193316	103088037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105357_103105382_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_19139.known	chr10	-	3525	19	FSM	ENSG00000076685.19	ENST00000404739.8	3525	19	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_17	92.3316118304553	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	6	True	NA	-9	True	AATAAA	-15	NA	103193272	103088037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181184_103181329_103193235
transcript_1914.nnic	chr1	-	853	6	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	6.03324125159934	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGCCGAGACTGAGGGTTT	-2	True	NA	0	True	AGTAAA	-19	NA	18298333	18289107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18290503_18290631_18291054_18291127_18291738_18291800_18295686_18295763_18298239
transcript_19143.known	chr10	-	3435	18	FSM	ENSG00000076685.19	ENST00000343289.9	3435	18	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_17	56.5892747856097	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGTGTTACATAGGC	3951	False	NA	11	True	AATAAA	-35	NA	103193306	103088017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_19145.known	chr10	-	2648	18	FSM	ENSG00000076685.19	ENST00000675645.1	2648	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.574093760526	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGAGGCCGAGACAGGCG	-21	True	NA	NA	False	NA	NA	NA	103193299	103088648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103089909_103090610_103090639_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_19146.known	chr10	-	3413	17	FSM	ENSG00000076685.19	ENST00000675985.1	3413	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_16	98.1417780241931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAATAAAGTGTAATAT	-4	True	NA	-48	True	NA	NA	NA	103153627	103088180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103153290
transcript_19151.nnic	chr10	-	1471	4	NNC	ENSG00000076685.19	novel	4688	20	NA	NA	-10	27236	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	48.6415460280612	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTTTGCTTGGTTAT	3941	False	NA	0	True	AATAAA	-22	NA	103193316	103142047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_103143169_103174857_103174983_103181184_103181329_103193235
transcript_19155.nic	chr10	-	516	4	NIC	ENSG00000076685.19	novel	427	3	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	50.4799189997589	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATATGTA	3941	False	NA	NA	False	AATAAA	-41	NA	103193316	103169283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_103169450_103174857_103174983_103181184_103181329_103193235
transcript_19166.known	chr10	-	427	3	FSM	ENSG00000076685.19	ENST00000467380.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	45.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATATGTA	NA	False	NA	NA	False	AATAAA	-41	NA	103181320	103169283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103169450_103174857_103174983_103181184
transcript_19168.known	chr10	-	2236	10	FSM	ENSG00000156374.16	ENST00000369847.4	2236	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	24.5029602645965	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	5	True	NA	0	True	AATAAA	-17	NA	103351140	103302795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_19169.known	chr10	-	1950	7	FSM	ENSG00000156374.16	ENST00000337211.8	1950	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	66.9271992541149	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	22	True	NA	0	True	AATAAA	-17	NA	103351079	103302795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103348715_103348813_103348899_103349000_103350706
transcript_19174.known	chr10	-	560	5	FSM	ENSG00000173915.16	ENST00000337003.4	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	3000.45832957233	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	0	True	NA	-2	True	AATAAA	-17	NA	103396466	103389049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103396408
transcript_19184.known	chr10	-	364	4	FSM	ENSG00000173915.16	ENST00000309579.7	364	4	0	0	0	0	multi-exon	FALSE	canonical	3	5119	junction_3	515.528423615571	20362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	0	True	NA	-2	True	AATAAA	-17	NA	103396466	103389049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103396408
transcript_19185.known	chr10	-	882	6	FSM	ENSG00000173915.16	ENST00000369825.6	882	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	2943.7000118898	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTACAAGATATCAA	NA	False	NA	7	True	AATAAA	-26	NA	103396492	103389040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103395745_103396033_103396408
transcript_19186.known	chr10	-	660	5	FSM	ENSG00000173915.16	ENST00000369815.6	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	2912.36899919979	3555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-9	True	NA	-2	True	AATAAA	-17	NA	103396475	103389049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745_103396033_103396408
transcript_19187.known	chr10	-	635	4	FSM	ENSG00000173915.16	ENST00000369811.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_3	2681.47732913532	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	392	False	NA	-2	True	AATAAA	-17	NA	103396074	103389049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745
transcript_19188.known	chr10	+	6467	36	FSM	ENSG00000148843.15	ENST00000649849.1	6467	36	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_31	59.308560142044	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTGGCAGAGCTTTAA	-24	True	NA	4	True	ATTAAA	-4	NA	103396625	103446281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289_103440582_103440733_103440851_103441825_103441976_103442209_103442461_103443164_103443334_103443914_103444069_103444516_103444683_103445377
transcript_19194.nic	chr10	+	495	4	ISM	ENSG00000148843.15	ENST00000493610.2	732	6	-52	4614	-28	-4614	5prime_fragment	FALSE	canonical	2	4	junction_2	163.20607287176	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATCGAAAAGAGAG	NA	False	NA	NA	False	AAAAAG	-30	NA	103396597	103400461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_103396731_103398415_103398529_103399646_103399831_103400396
transcript_19195.nnic	chr10	+	408	4	NNC	ENSG00000148843.15	novel	732	6	NA	NA	-28	-4614	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	161.969132861789	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATCGAAAAGAGAG	NA	False	NA	NA	False	AAAAAG	-30	NA	103396597	103400461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_103396731_103398415_103398529_103399733_103399831_103400396
transcript_19200.nic	chr10	+	311	3	ISM	ENSG00000148843.15	ENST00000649849.1	6467	36	-28	45820	-28	-4614	5prime_fragment	FALSE	canonical	3	275	junction_2	41	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATCGAAAAGAGAG	NA	False	NA	NA	False	AAAAAG	-30	NA	103396597	103400461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_103396731_103398415_103398529_103400396
transcript_19207.known	chr10	-	1843	4	FSM	ENSG00000138172.11	ENST00000369788.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGGTGTCTGTGTGA	3	True	NA	NA	False	GATAAA	-20	NA	103452402	103446785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103447569_103449386_103450100_103451082_103451183_103452155
transcript_19208.known	chr10	-	1914	4	FSM	ENSG00000138172.11	ENST00000260743.10	1914	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGGTGTCTGTGTGA	-1	True	NA	NA	False	GATAAA	-20	NA	103452370	103446785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103447569_103449386_103450100_103451082_103451286_103452155
transcript_19209.known	chr10	-	1652	3	FSM	ENSG00000183128.7	ENST00000369783.4	1652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCATTTGTGTAATTGTC	NA	False	NA	NA	False	NA	NA	NA	103479240	103472803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103473705_103476293_103476550_103478745
transcript_1921.nnic	chr1	-	774	5	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_2	4.30116263352131	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCAAATTTATTC	NA	False	NA	-17	True	AGTAAA	-2	NA	18298398	18289124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18291054_18291127_18291738_18291800_18295686_18295763_18298239
transcript_19211.known	chr10	-	6369	10	FSM	ENSG00000107960.11	ENST00000224950.8	6369	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	10.6504506367305	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGCAAAAGGTTCTGTG	-2	True	NA	-7	True	AATAAA	-20	NA	103918184	103877568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_19212.known	chr10	-	1311	9	FSM	ENSG00000107960.11	ENST00000369764.1	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	10.7935165724615	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	5	True	NA	-54	True	AATAAA	-13	NA	103917669	103882554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461
transcript_19213.known	chr10	-	1414	11	FSM	ENSG00000107960.11	ENST00000466828.5	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	49.8438561911094	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	52	True	NA	-54	True	AATAAA	-13	NA	103918130	103882554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898292_103898378_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_19214.nnic	chr10	-	732	4	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCATTTGGTTTTTTTG	101	False	NA	-5	True	AATAAA	-16	NA	103967094	103965595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_-_103965914_103966098_103966244_103966730_103966906_103967000
transcript_19217.known	chr10	+	1503	4	FSM	ENSG00000156384.15	ENST00000369729.7	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	50.7630661888039	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTGTCTCTTCAAA	19	False	NA	12	True	ATTAAA	-21	NA	104122057	104126385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104122155_104122964_104123087_104123713_104124125_104125512
transcript_19218.known	chr10	+	1430	4	FSM	ENSG00000156384.15	ENST00000369727.4	1430	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	32.5610537640019	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCCCTGTCTCTTCA	8	True	NA	10	True	ATTAAA	-19	NA	104122170	104126383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104122197_104122964_104123087_104123713_104124125_104125512
transcript_19239.known	chr10	+	1052	6	FSM	ENSG00000148834.13	ENST00000539281.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	346.124486276253	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	17	False	NA	24	True	AATAAA	-32	NA	104254193	104267459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_19243.known	chr10	+	813	6	FSM	ENSG00000148834.13	ENST00000369713.10	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	54.2387315485899	7276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATAATAGCATGCTTT	-5	True	NA	20	True	AATAAA	-28	NA	104254891	104267455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_19251.known	chr10	+	900	5	FSM	ENSG00000148834.13	ENST00000369710.8	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	353.458979232386	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	533	False	NA	24	True	AATAAA	-32	NA	104254709	104267459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104266083_104266191_104267251
transcript_19261.known	chr10	+	6715	7	FSM	ENSG00000065621.15	ENST00000338595.7	6715	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.6161810688017	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAATCTCGCTACTCTG	2	True	NA	14	True	AATAAA	-28	NA	104269183	104304950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_19262.known	chr10	+	1391	6	FSM	ENSG00000065621.15	ENST00000450629.6	1391	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.2343634682817	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCTGATAATCATTTG	9	True	NA	17	True	AATAAA	-18	NA	104268872	104299417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104297577_104297685_104299127
transcript_19264.nic	chr10	+	797	5	NIC	ENSG00000065621.15	novel	6715	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	35.7657308047802	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGATAATCATTTGT	44	False	NA	18	True	AATAAA	-19	NA	104274875	104299418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_104274950_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_19266.known	chr10	+	6423	5	FSM	ENSG00000065621.15	ENST00000369707.2	6423	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	24.8231242997331	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCAGAATCTCGCTA	9	True	NA	9	True	AATAAA	-23	NA	104275161	104304945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_19270.known	chr10	+	669	4	FSM	ENSG00000065621.15	ENST00000473401.5	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	49.6655480858378	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCTTCTGATAATCAT	-1	True	NA	14	True	AATAAA	-15	NA	104274897	104299414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104274950_104277893_104278117_104297577_104297685_104299127
transcript_19272.nic	chr10	+	827	4	ISM	ENSG00000065621.15	ENST00000450629.6	1391	6	6256	-1	-33	0	3prime_fragment	FALSE	canonical	3	27	junction_2	47.5254317883243	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGATAATCATTTGT	-24	True	NA	18	True	AATAAA	-19	NA	104275128	104299418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_104275335_104277893_104278117_104297577_104297685_104299127
transcript_19284.known	chr10	-	795	2	FSM	ENSG00000231233.2	ENST00000435434.2	1134	2	49	290	49	-290	multi-exon	FALSE	canonical	2	5	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAACAATCCATTCTTT	-4	True	NA	NA	False	NA	NA	NA	104353575	104351590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_104351928_104353117
transcript_19285.nnic	chr10	-	1004	2	NNC	ENSG00000231233.2	novel	1134	2	NA	NA	22	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGTGCAGTGACATCTC	NA	False	NA	-2	True	AATAAA	-16	NA	104353602	104351303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_104351928_104353222
transcript_193.known	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1288	junction_5	1014.67123458079	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
transcript_1930.nnic	chr1	-	756	4	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	8.52447456836295	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCAAATTTATTC	NA	False	NA	-17	True	AGTAAA	-2	NA	18298452	18289124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18291738_18291800_18295686_18295763_18298239
transcript_19307.nnic	chr10	+	927	4	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	36.0832371053374	31	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTGTGCATTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	107367729	107479258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_+_107367934_107379595_107379720_107477756_107477886_107478788
transcript_19311.nnic	chr10	+	972	4	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	41.9708893824703	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCTCATGCTATCTT	NA	False	NA	9	True	AGTAAA	-43	NA	107367613	107543533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_+_107367934_107379595_107379720_107477756_107477886_107543134
transcript_19312.nnic	chr10	+	808	4	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	44.3796750276019	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCTCATGCTATCTT	NA	False	NA	9	True	AGTAAA	-43	NA	107367767	107543533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_+_107367934_107379595_107379720_107513065_107513185_107543134
transcript_19314.nnic	chr10	+	876	4	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	9.20144916122817	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTTGTGCATTCTTTGG	NA	False	NA	NA	False	NA	NA	NA	107367718	107479258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_+_107367934_107404772_107404835_107477756_107477886_107478788
transcript_19316.nnic	chr10	+	795	4	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.44948974278318	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCTCATGCTATCTT	NA	False	NA	9	True	AGTAAA	-43	NA	107367718	107543533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_+_107367934_107404772_107404835_107513065_107513185_107543134
transcript_19321.nnic	chr10	+	843	3	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_2	42.5	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTCCTCATGCTATCTT	NA	False	NA	9	True	AGTAAA	-43	NA	107367613	107543533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_+_107367934_107379595_107379720_107543134
transcript_1933.nnic	chr1	-	579	3	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	8	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCAAATTTATTC	-5	True	NA	-17	True	AGTAAA	-2	NA	18298336	18289124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18295686_18295763_18298239
transcript_19335.known	chr10	-	2497	21	FSM	ENSG00000108039.18	ENST00000502935.6	2497	21	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_8	24.6777227474498	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-39	True	NA	-5	True	AATAAA	-16	NA	109923511	109864765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_19338.nic	chr10	-	2439	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_19	57.4143707820539	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	10	False	NA	-5	True	AATAAA	-16	NA	109923542	109864765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109923401
transcript_19344.known	chr10	-	2467	20	FSM	ENSG00000108039.18	ENST00000322238.12	2467	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	61.5820062218235	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-1	True	NA	-5	True	AATAAA	-16	NA	109923553	109864765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_19348.known	chr10	-	2344	19	FSM	ENSG00000108039.18	ENST00000369683.5	2344	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_17	80.2239919780167	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-39	True	NA	-5	True	AATAAA	-16	NA	109923511	109864765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109907690_109907816_109923401
transcript_1935.nnic	chr1	-	531	2	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCTAGCATTTACATGA	NA	False	NA	NA	False	AATAAA	-19	NA	18298452	18297765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18298084_18298239
transcript_19368.known	chr10	+	4413	15	FSM	ENSG00000148700.15	ENST00000356080.9	4413	15	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_5	54.9313579081443	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTGTATCATGAGGTT	2	True	NA	NA	False	AATAAA	-17	NA	110007983	110135565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110132304_110132401_110133325
transcript_1937.known	chr1	+	491	2	FSM	ENSG00000225387.1	ENST00000420211.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGACCCCAAGCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	18385828	18388514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_18386221_18388415
transcript_19386.nic	chr10	+	1400	2	ISM	ENSG00000148700.15	ENST00000487085.5	708	5	-280	11247	-36	948	5prime_fragment	FALSE	canonical	3	528	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAACTCAAGTGGAAAA	1828	False	NA	NA	False	NA	NA	NA	110007927	110101652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_110008300_110100624
transcript_1939.known	chr1	+	5045	1	FSM	ENSG00000179023.9	ENST00000400664.3	5045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACACACACCAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-11	NA	18480929	18485974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_18480900_18486000
transcript_19392.known	chr10	+	3470	6	FSM	ENSG00000119950.21	ENST00000332674.9	3470	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	23.38888624967	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTCTTTTTGTACCAT	-21	True	NA	14	True	AATAAA	-17	NA	110207604	110287365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110208083_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19393.known	chr10	+	782	6	FSM	ENSG00000119950.21	ENST00000460667.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	44.0199954566104	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATCAGTGACATTGATG	10	False	NA	NA	False	AATATA	-9	NA	110226034	110284890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110226284_110228188_110228322_110244827_110244874_110279179_110279295_110279913_110280086_110284823
transcript_19394.known	chr10	+	2255	6	FSM	ENSG00000119950.21	ENST00000650843.1	2255	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.1492585937167	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAGAAAATAAAGAC	1004	False	NA	-13	True	NA	NA	NA	110227086	110286596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227119_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19396.known	chr10	+	2121	6	FSM	ENSG00000119950.21	ENST00000650644.1	2121	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5487955176172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTTAACTACCCTTAATT	1054	False	NA	-5	True	TTTAAA	-1	NA	110227136	110286468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227163_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19398.known	chr10	+	2237	6	FSM	ENSG00000119950.21	ENST00000652463.1	2237	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5487955176172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGCAAGGAAAAAGAAAAT	1235	False	NA	-19	True	NA	NA	NA	110227317	110286590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227338_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_1940.known	chr1	-	2124	16	FSM	ENSG00000159423.17	ENST00000290597.9	2124	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	35.8723663377072	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-12	True	NA	-8	True	AATAAA	-16	NA	18902553	18871429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_18871791_18872803_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_19400.known	chr10	+	567	6	FSM	ENSG00000119950.21	ENST00000651557.1	567	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.8019304659585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTCTCCCATGGAGAAG	-14	True	NA	NA	False	NA	NA	NA	110227325	110284851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227399_110228188_110228322_110244827_110244874_110279179_110279295_110279913_110280086_110284823
transcript_19405.known	chr10	+	2303	6	FSM	ENSG00000119950.21	ENST00000650810.1	2303	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5487955176172	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAACCATATTTAGC	0	True	NA	0	True	AAAAAG	-5	NA	110227339	110286609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227407_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19406.known	chr10	+	2256	6	FSM	ENSG00000119950.21	ENST00000652649.1	2256	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5487955176172	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTACTTAAAAAAAAAA	121	False	NA	9	True	TTTAAA	-15	NA	110226203	110286482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110226351_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19407.known	chr10	-	753	5	FSM	ENSG00000119953.14	ENST00000460483.5	753	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	71.7857054015631	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGTAAATCTTTTTAC	37	False	NA	NA	False	AAAAAG	-4	NA	110304906	110295229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110295382_110297566_110297746_110298647_110298791_110303467_110303588_110304747
transcript_19408.known	chr10	-	4310	6	FSM	ENSG00000119953.14	ENST00000369603.10	4310	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	15.7098695093244	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGATTCAATAAATATCA	23	True	NA	NA	False	ATTAAA	-28	NA	110304920	110290729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304747
transcript_19409.known	chr10	-	803	5	FSM	ENSG00000119953.14	ENST00000674928.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	82.5242388635	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTGACTTTGACTT	5	True	NA	0	True	NA	NA	NA	110304938	110297569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110297729_110298647_110298791_110300546_110300737_110303467_110303588_110304747
transcript_19411.known	chr10	-	209	2	FSM	ENSG00000273143.2	ENST00000607952.1	209	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCACCTCCTGGCTCA	5160	False	NA	NA	False	NA	NA	NA	110496204	110475103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110475227_110496118
transcript_19412.known	chr10	+	2477	4	FSM	ENSG00000138166.6	ENST00000369583.4	2477	4	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	22.8083805260747	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAAAGCACTTCTTCAT	1	True	NA	9	True	AATAAA	-11	NA	110497906	110511533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110498501_110502720_110502870_110506934_110507155_110510019
transcript_1942.known	chr1	-	3139	15	FSM	ENSG00000159423.17	ENST00000375341.8	3139	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	15.6010530780091	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-14	True	NA	-8	True	AATAAA	-16	NA	18902555	18871429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_19422.known	chr10	+	5522	29	FSM	ENSG00000108055.11	ENST00000361804.5	5522	29	0	0	0	0	multi-exon	FALSE	non_canonical	3	962	junction_19	108.884762853361	4105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAGCCTATATT	-18	True	NA	NA	False	AATAAA	-23	NA	110567694	110606048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604_110589709_110589891_110589992_110590411_110590573_110590990_110591133_110593072_110593224_110596397_110596551_110598138_110598291_110599653_110599813_110600438_110600547_110601021_110601131_110601636_110601885_110601965_110602179_110602473_110602666_110602824_110603003_110603183_110603291_110604230
transcript_19423.known	chr10	+	3697	13	FSM	ENSG00000150593.18	ENST00000393104.6	3697	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	63.1550121174524	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAGTTGTATTTAAT	0	True	NA	NA	False	AATAAA	-19	NA	110871794	110900005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110872019_110875965_110876071_110876669_110876754_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_19430.known	chr10	+	3481	12	FSM	ENSG00000150593.18	ENST00000280154.12	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	21.5966021202525	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAGTTGTATTTAATC	7	True	NA	NA	False	AATAAA	-20	NA	110871927	110900006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110872019_110875965_110876071_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_19434.nic	chr10	+	2193	12	NIC	ENSG00000150593.18	novel	3481	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	47.0173170137722	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACATGTGAAGCAGT	-4	True	NA	-13	True	AATGAA	-27	NA	110871885	110898718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_110872019_110875965_110876071_110881274_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_1944.known	chr1	-	2957	14	FSM	ENSG00000159423.17	ENST00000538839.5	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	38.7565608112634	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTGGTGGATGGTC	13	True	NA	-10	True	AATAAA	-14	NA	18902528	18871431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_19441.known	chr10	-	569	4	FSM	ENSG00000214413.9	ENST00000605742.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	54.0144013718152	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAATTTGTATTGTGAA	-1	True	NA	-1	True	AATAAA	-40	NA	110918936	110900217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110918844
transcript_19442.known	chr10	-	1841	4	FSM	ENSG00000214413.9	ENST00000651952.1	1841	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	52.8540968663315	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCTAGGTCAGATAACAA	0	True	NA	NA	False	NA	NA	NA	110919176	110898973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110907679_110907837_110919120
transcript_19445.known	chr10	-	727	3	FSM	ENSG00000214413.9	ENST00000447005.5	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	54.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATAAAGTGTTTGT	164	False	110919224	1	True	ATTAAA	-24	NA	110919201	110899955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110919120
transcript_1945.nic	chr1	-	1441	10	ISM	ENSG00000127481.15	ENST00000425413.5	2954	21	12563	13	6991	0	3prime_fragment	FALSE	canonical	3	137	junction_8	17.9876500843094	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAGGAGAAA	NA	False	NA	NA	False	AAAAAG	-11	NA	19139137	19121212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_19121435_19121933_19122013_19122832_19123061_19124540_19124691_19126445_19126656_19127622_19127740_19128210_19128319_19128977_19129075_19138006_19138182_19139082
transcript_19450.known	chr10	-	2025	4	FSM	ENSG00000214413.9	ENST00000448814.7	2025	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	4.49691252107735	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTATTTTGGTGTAC	-4	True	NA	-8	True	AATAAA	-18	NA	110919180	110898729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110919120
transcript_19451.known	chr10	-	812	5	FSM	ENSG00000214413.9	ENST00000454061.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	52.7938206611342	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTGCAAATTAAATTAT	164	False	110919224	-35	True	NA	NA	NA	110919201	110900120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110907679_110907837_110918120_110918214_110919120
transcript_19452.known	chr10	-	616	5	FSM	ENSG00000214413.9	ENST00000398289.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54.8925085963467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAAAATATCCAAGATT	-6	True	NA	-21	True	AATAAA	-20	NA	110919182	110900237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901025_110901123_110901537_110901613_110918120_110918214_110919120
transcript_19453.known	chr10	-	383	3	FSM	ENSG00000214413.9	ENST00000436562.1	383	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCAAGATTGATGAAATT	19	True	NA	-12	True	AATAAA	-29	NA	110919157	110900228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901586_110919120
transcript_19454.known	chr10	+	819	6	FSM	ENSG00000150593.18	ENST00000444997.1	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	57.4407520842128	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTACCTGAATTAGCACT	6	True	NA	NA	False	GATAAA	-10	NA	110871954	110887844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110872019_110875965_110876071_110881274_110881536_110883002_110883098_110885252_110885367_110887664
transcript_19458.known	chr10	+	3884	9	FSM	ENSG00000108061.13	ENST00000369452.9	3884	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	15.483862567202	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	-6	True	NA	14	True	TATAAA	-29	NA	110919603	111013665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110919658_110964124_110965062_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_19459.nnic	chr10	+	2951	8	FSM	ENSG00000108061.13	ENST00000689997.1	3581	8	25	605	0	0	multi-exon	TRUE	canonical	3	18	junction_1	66.2364348838496	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	-10	True	NA	14	True	TATAAA	-29	NA	110919599	111013665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110919658_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_19460.nic	chr10	+	379	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-60	5809	-35	-344	multi-exon	FALSE	canonical	3	218	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTAAAGAAAAAGATCC	774	False	NA	NA	False	AAGAAA	-3	NA	110919539	110964385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110919658_110964124
transcript_19461.nic	chr10	+	475	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-60	5713	-35	-248	multi-exon	FALSE	canonical	3	218	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCTAAGACCAAAGGGAA	774	False	NA	NA	False	AAGAAA	-3	NA	110919539	110964481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110919658_110964124
transcript_19462.known	chr10	-	612	1	FSM	ENSG00000234118.1	ENST00000430133.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCAATAAAGACTGTTAAA	19	False	NA	NA	False	AATACA	-36	NA	110937233	110936621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110936600_110937200
transcript_19463.known	chr10	+	650	3	ISM	ENSG00000108061.13	ENST00000691441.1	7727	10	5	52783	0	-205	5prime_fragment	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGTGCTGCCCAACCA	17	False	NA	NA	False	AAAAAG	-43	NA	110919592	110964524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_110919658_110951607_110951793_110964124
transcript_19464.known	chr10	-	6372	22	FSM	ENSG00000119927.14	ENST00000348367.9	6372	22	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	8.26872916996123	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGATGTGTTTGATTTG	-32	True	NA	-1	True	AATAAA	-17	NA	112183765	112149864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112153667_112154628_112154688_112155863_112156054_112157248_112157390_112158315_112158394_112159910_112160054_112160603_112160869_112161666_112161738_112163700_112163817_112164524_112164611_112166401_112166516_112168311_112168525_112168852_112168953_112172181_112172319_112172969_112173067_112173698_112173846_112175599_112175714_112177983_112178058_112180472_112180596_112181682_112181814_112182793_112182892_112183692
transcript_19469.nnic	chr10	+	1201	8	NNC	ENSG00000151532.14	novel	4174	8	NA	NA	-18	14815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	29.3737353179777	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGGCTGCCAGGGT	-17	True	NA	NA	False	AATAAA	-13	NA	112446979	112752599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112752352
transcript_1947.known	chr1	-	5408	23	FSM	ENSG00000127463.16	ENST00000375199.7	5408	23	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_14	59.234737546742	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAATTAG	20	False	NA	NA	False	NA	NA	NA	19251509	19216873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238855_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
transcript_19470.known	chr10	+	4174	8	FSM	ENSG00000151532.14	ENST00000393077.3	4174	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	10.259888211986	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	-26	True	NA	13	True	ATTAAA	-18	NA	112447214	112818744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112815289
transcript_19474.nnic	chr10	+	1742	4	NNC	ENSG00000151532.14	novel	2423	3	NA	NA	32	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	4.92160768674447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAATCTTAACTAAT	34	False	NA	10	True	AATAAA	-18	NA	112447030	112450726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_112447468_112448381_112448490_112448881_112449508_112450155
transcript_19476.known	chr10	+	463	3	FSM	ENSG00000151532.14	ENST00000494728.5	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGTAACAGCTTTC	35	True	NA	NA	False	ATTAAA	-25	NA	112447275	112464758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112447468_112460523_112460583_112464546
transcript_19479.nnic	chr10	+	1446	3	NNC	ENSG00000151532.14	novel	2423	3	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAATCTTAACTAAT	-22	True	NA	10	True	AATAAA	-18	NA	112447218	112450726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_112447468_112448881_112449508_112450155
transcript_19480.known	chr10	+	1247	2	FSM	ENSG00000151532.14	ENST00000472892.1	1247	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATCGCTTGAACCTGG	2	True	NA	NA	False	NA	NA	NA	112446998	112449659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112447468_112448881
transcript_19481.known	chr10	+	853	5	FSM	ENSG00000151532.14	ENST00000496445.5	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	6.72216482987438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCAATCTCCAGTTTGCT	23	True	NA	NA	False	NA	NA	NA	112447263	112538646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245
transcript_19486.known	chr10	-	2145	11	FSM	ENSG00000023041.12	ENST00000683895.1	2145	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	55.6691117227498	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-10	True	NA	-18	True	AATAAA	-18	NA	112446956	112430304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
transcript_19493.known	chr10	-	3216	10	FSM	ENSG00000023041.12	ENST00000682182.1	3216	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	31.9652589192983	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-4	True	NA	-18	True	AATAAA	-18	NA	112446950	112430304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_19494.known	chr10	-	2038	10	FSM	ENSG00000023041.12	ENST00000682195.1	2038	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	58.4446556819165	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-3	True	NA	-18	True	AATAAA	-18	NA	112446949	112430304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_19495.known	chr10	-	2121	11	FSM	ENSG00000023041.12	ENST00000684173.1	2121	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	56.815578849467	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	614	False	NA	-18	True	AATAAA	-18	NA	112446962	112430304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112443514_112443607_112445169_112445651_112446704
transcript_19496.known	chr10	-	1721	11	FSM	ENSG00000023041.12	ENST00000369404.3	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	56.0378443553997	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTCTGGTTAAGATGT	9	True	NA	-5	True	ACTAAA	-15	NA	112446901	112430723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443595_112445169_112445651_112446704
transcript_19497.known	chr10	-	2008	10	FSM	ENSG00000023041.12	ENST00000684741.1	2008	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	64.5332721150613	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	5	True	NA	-18	True	AATAAA	-18	NA	112446941	112430304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112445169_112445651_112446704
transcript_19498.known	chr10	-	2297	12	FSM	ENSG00000023041.12	ENST00000682055.1	2297	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	73.0295988901047	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	614	False	NA	-18	True	AATAAA	-18	NA	112446962	112430304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112441728_112441813_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_1950.nnic	chr1	+	307	2	FSM	ENSG00000230424.2	ENST00000690421.1	296	2	-11	0	-5	0	multi-exon	FALSE	canonical	3	28	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTAGTTCTTATTTT	-5	True	NA	15	True	AATAAA	-20	NA	19210349	19213718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19210560_19213621
transcript_19500.known	chr10	-	358	3	FSM	ENSG00000233340.1	ENST00000443652.1	358	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTGGTAGATGATTATT	-3	True	NA	NA	False	AATAAA	-13	NA	112677819	112671811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112671945_112672728_112672769_112677634
transcript_19502.known	chr10	+	2160	15	FSM	ENSG00000148737.17	ENST00000545257.6	2160	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	96.7328532503781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGTAGATGAGAGAAG	172	False	NA	NA	False	NA	NA	NA	112950663	113166160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113160618_113160692_113165554
transcript_19504.known	chr10	+	4000	14	FSM	ENSG00000148737.17	ENST00000538897.5	4000	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	83.7005793423709	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	-7	True	NA	19	True	AATAAA	-25	NA	112950249	113167678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113165554
transcript_19506.known	chr10	+	3802	14	FSM	ENSG00000148737.17	ENST00000369397.8	3802	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	77.6142791718183	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	96	False	NA	19	True	AATAAA	-25	NA	112950451	113167678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
transcript_19509.known	chr10	+	1979	13	FSM	ENSG00000148737.17	ENST00000355717.9	1979	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	87.195302816914	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	94	False	NA	NA	False	NA	NA	NA	112950585	113165972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113089399_113089541_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_1951.known	chr1	+	507	2	FSM	ENSG00000230424.2	ENST00000437898.2	653	2	146	0	140	0	multi-exon	FALSE	canonical	3	15	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAATCAGCACTTCTT	-13	True	NA	NA	False	AATATA	-25	NA	19210500	19240704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19210560_19240256
transcript_19510.nic	chr10	+	2615	13	NIC	ENSG00000148737.17	novel	4000	14	NA	NA	-32	3	combination_of_known_junctions	FALSE	canonical	3	33	junction_12	72.0016878660185	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGAAGCAGCCCTCCAG	NA	False	NA	NA	False	ATTAAA	-23	NA	112950214	113166327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113165554
transcript_19511.known	chr10	+	3953	13	FSM	ENSG00000148737.17	ENST00000536810.5	3953	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	68.2511701161396	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	-7	True	NA	19	True	AATAAA	-25	NA	112950249	113167678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113159919_113159993_113165554
transcript_19512.known	chr10	+	1755	13	FSM	ENSG00000148737.17	ENST00000629706.2	1755	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	93.9105292286227	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	65	False	NA	NA	False	NA	NA	NA	112950756	113165972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150982_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113160618_113160692_113165554
transcript_19513.nic	chr10	+	2546	12	NIC	ENSG00000148737.17	novel	3953	13	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_11	46.4284751611026	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGCAAT	NA	False	NA	NA	False	ATTAAA	-5	NA	112950214	113166309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_19514.nic	chr10	+	3915	12	NIC	ENSG00000148737.17	novel	3953	13	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_11	46.4284751611026	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	NA	False	NA	19	True	AATAAA	-25	NA	112950214	113167678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_1952.known	chr1	-	562	2	ISM	ENSG00000127463.16	ENST00000475079.1	557	4	-2	962	-1	-962	5prime_fragment	FALSE	canonical	3	308	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATCAGGCATGGTGG	2	True	NA	NA	False	NA	NA	NA	19251527	19244581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_19245031_19251414
transcript_19520.nic	chr10	+	1508	9	ISM	ENSG00000148737.17	ENST00000352065.10	1553	15	-445	13854	-32	0	5prime_fragment	FALSE	canonical	3	145	junction_3	33.0186973546807	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGCCCCACATAAAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	112950214	113151758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724
transcript_19523.known	chr10	+	1026	4	FSM	ENSG00000148737.17	ENST00000466338.5	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	69.3076875646241	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGCAAT	NA	False	NA	NA	False	ATTAAA	-5	NA	113151770	113166309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113151885_113152332_113152441_113158020_113158070_113165554
transcript_19527.known	chr10	-	460	2	FSM	ENSG00000233547.1	ENST00000369391.3	460	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGTCCAAGGTGAACTT	NA	False	NA	NA	False	AAAAAG	-33	NA	112951875	112950645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112951008_112951777
transcript_19528.known	chr10	+	2985	13	FSM	ENSG00000148702.15	ENST00000351270.4	2985	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGAGTTTGTCTTTCCCC	3	True	NA	NA	False	AATAAA	-14	NA	113553052	113589602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113553191_113567488_113567526_113574288_113574406_113575896_113576005_113577149_113577267_113578025_113578146_113578626_113578799_113580594_113580693_113581875_113582132_113583215_113583359_113584147_113584283_113585792_113585939_113588204
transcript_19531.known	chr10	+	2421	8	FSM	ENSG00000165806.21	ENST00000369315.5	2421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.9473029261397	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTCCAGTTTGCTTTC	27	False	NA	13	True	ATTAAA	-21	NA	113679939	113730903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113679979_113691963_113692071_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_19532.known	chr10	+	2467	7	FSM	ENSG00000165806.21	ENST00000621345.4	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.01387818865997	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTTTGCTTTCCTTT	-20	True	NA	17	True	ATTAAA	-25	NA	113679161	113730907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113679350_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_19533.known	chr10	+	2620	7	FSM	ENSG00000165806.21	ENST00000369321.6	2620	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.3785861257989	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTTTGCTTTCCTTT	143	False	NA	17	True	ATTAAA	-25	NA	113679668	113730907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113679979_113697493_113697604_113721000_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_19535.known	chr10	+	2344	7	FSM	ENSG00000165806.21	ENST00000369318.8	2344	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.3879226322456	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCAGTTTGCTTTCCT	-1	True	NA	15	True	ATTAAA	-23	NA	113679911	113730905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113679979_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_19536.known	chr10	-	4241	10	FSM	ENSG00000198924.8	ENST00000369305.1	4241	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	13.4412301024373	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCTGGTGTCTTTTGT	9	True	NA	NA	False	AATAAA	-13	NA	113854383	113834728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722_113853848_113854353
transcript_19538.known	chr10	-	4450	9	FSM	ENSG00000198924.8	ENST00000361384.7	4450	9	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_6	9.21869703374615	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTGTCTTTTGTTTTT	-1	True	NA	NA	False	AATAAA	-17	NA	113854082	113834724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722
transcript_19540.known	chr10	-	7343	17	FSM	ENSG00000165813.20	ENST00000648613.1	7343	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	14.2647949512077	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTACTTATTAAATA	-22	True	NA	-44	True	TATAAA	-29	NA	114174232	114120900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114173140_114173266_114174014
transcript_19545.known	chr10	-	2035	3	FSM	ENSG00000165813.20	ENST00000369285.7	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	8	True	NA	-5	True	AATAAA	-22	NA	114174202	114161607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114163330_114173140_114173266_114174014
transcript_19547.known	chr10	-	7228	16	FSM	ENSG00000165813.20	ENST00000369287.8	7228	16	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_6	10.715720538847	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAGTTTGATGGCATCT	7	True	NA	-5	True	ATTAAA	-22	NA	114174203	114120861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_19548.known	chr10	-	1928	2	FSM	ENSG00000165813.20	ENST00000369286.1	1928	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-10	True	NA	-5	True	AATAAA	-22	NA	114174220	114161607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114163330_114174014
transcript_19549.nnic	chr10	+	911	7	NNC	ENSG00000165816.13	novel	2875	12	NA	NA	121	-13387	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	6.0667582410671	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGTTCAGTCTCTACTT	50	False	NA	NA	False	AATAAA	-14	NA	114239476	114276486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_114239570_114248703_114248766_114253650_114253726_114254914_114255049_114261185_114261296_114272739_114272935_114276244
transcript_19558.nic	chr10	-	2549	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-29	91	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	64.2299336368955	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACAAGTCCCATGTCC	NA	False	NA	NA	False	AAAAAG	-8	NA	114526960	114435349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_19559.nic	chr10	-	2555	17	NIC	ENSG00000099204.21	novel	6841	18	NA	NA	-29	91	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	69.7203958232453	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACAAGTCCCATGTCC	NA	False	NA	NA	False	AAAAAG	-8	NA	114526960	114435349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448027_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526659
transcript_19563.known	chr10	-	2255	16	FSM	ENSG00000099204.21	ENST00000369253.6	2255	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.4593550573436	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCAGATTGGCCCAG	-14	True	NA	NA	False	AAGAAA	-14	NA	114526835	114435440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114436374_114437843_114437925_114439175_114439251_114440081_114440090_114441016_114441078_114441721_114441787_114444028_114444135_114445311_114445404_114447879_114448021_114451623_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114487957_114488017_114491790_114491879_114526659
transcript_19573.nic	chr10	-	1374	2	ISM	ENSG00000099204.21	ENST00000369253.6	2255	16	-125	55365	-29	-25341	5prime_fragment	FALSE	canonical	3	189	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATATATATAAAGGACC	NA	False	NA	NA	False	AAAAAG	-38	NA	114526960	114490805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_114491879_114526659
transcript_19575.known	chr10	+	3406	8	FSM	ENSG00000165832.6	ENST00000298746.5	3406	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	27.2801041352971	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCATGAGTTATTT	-26	True	NA	8	True	AATAAA	-20	NA	114938194	114977676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725_114959808_114970367_114970441_114972134_114972275_114974328_114974386_114975122
transcript_19577.known	chr10	+	584	4	FSM	ENSG00000165832.6	ENST00000485065.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	11.6714276000077	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGCCTCTTTTTCTATA	165	False	NA	-6	True	AATAAA	-10	NA	114938385	114960000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725
transcript_19580.known	chr10	+	1818	8	FSM	ENSG00000107518.18	ENST00000609571.5	1818	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	6.1145527311522	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGTTATTTGAGATTG	12	True	NA	24	True	AATAAA	-25	NA	115093364	115171376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115165557_115165646_115171036
transcript_19581.known	chr10	-	1755	10	FSM	ENSG00000151892.16	ENST00000684105.1	1755	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	3.94405318873308	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTATCTGTTTCCTGT	2	True	NA	NA	False	ATTAAA	-34	NA	116272643	116064354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116064545_116065572_116065627_116089740_116089923_116093701_116093837_116096654_116096765_116125220_116125558_116269502_116269587_116270821_116271116_116271989_116272276_116272560
transcript_19582.known	chr10	-	4887	10	FSM	ENSG00000151892.16	ENST00000439649.8	4887	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	2.97313070227992	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTGGTTTCCATTTC	1685	False	NA	NA	False	NA	NA	NA	116273009	116061281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116064545_116065572_116065627_116089740_116089923_116093701_116093837_116096654_116096765_116125220_116125558_116269502_116269587_116270821_116271116_116271989_116272276_116272867
transcript_19584.known	chr10	+	1679	9	FSM	ENSG00000182645.6	ENST00000333254.4	1679	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.5474100913296	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	0	True	NA	8	True	ATTAAA	-21	NA	116324447	116380029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_116324614_116324946_116325091_116325302_116325389_116340733_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_19588.nnic	chr10	+	1430	7	NNC	ENSG00000182645.6	novel	313	2	NA	NA	448	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	12.3209397188508	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	1008	False	NA	8	True	ATTAAA	-21	NA	116325455	116380029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_116325603_116340733_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_19591.nnic	chr10	+	1389	7	NNC	ENSG00000182645.6	novel	313	2	NA	NA	453	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	14.7948940141148	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	-4	True	NA	8	True	ATTAAA	-21	NA	116325460	116380029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_116325603_116340769_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_19596.nnic	chr10	+	1309	6	NNC	ENSG00000182645.6	novel	1679	9	NA	NA	452	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	11.8894911581615	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	-5	True	NA	8	True	ATTAAA	-21	NA	116325459	116380029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_116325603_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_19602.nnic	chr10	-	2255	2	Antisense	novelGene_ENSG00000187021.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATATGTTTTGGAAGAA	NA	False	NA	NA	False	AATAAA	-20	NA	116609757	116605141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_-_116606904_116609264
transcript_19604.nnic	chr10	-	1567	2	Antisense	novelGene_ENSG00000187021.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTCTCTTTCTTGT	NA	False	NA	NA	False	TATAAA	-21	NA	116609757	116605829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_-_116606904_116609264
transcript_19606.nic	chr10	+	1113	8	ISM	ENSG00000266200.7	ENST00000579578.6	1482	13	6688	0	6335	0	3prime_fragment	TRUE	canonical	1	3	junction_6	1.12485826771597	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGGGTGAGCTGTTAGT	3622	False	NA	7	True	AATAAA	-18	NA	116627640	116645143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_116627875_116629942_116630063_116631237_116631358_116634840_116634960_116636784_116636915_116638368_116638481_116642114_116642283_116645033
transcript_19608.known	chr10	-	5841	13	FSM	ENSG00000165868.16	ENST00000635765.1	5841	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	7.48888064622032	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCCCAGATTTTTTTTC	-50	True	NA	0	True	AATAAA	-19	NA	116849741	116671191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116675419_116676398_116676503_116679502_116679762_116681151_116681257_116681790_116681878_116683790_116683963_116692350_116692468_116698634_116698740_116700942_116701130_116705150_116705279_116707199_116707286_116834934_116835023_116849565
transcript_19612.known	chr10	-	4894	4	FSM	ENSG00000165868.16	ENST00000453491.3	4894	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.942809041582063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTTTGTGTGTCCTT	-10	True	NA	-3	True	CATAAA	-43	NA	116849701	116828763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116833374_116834934_116835023_116835197_116835258_116849565
transcript_19614.known	chr10	-	525	3	FSM	ENSG00000165868.16	ENST00000674326.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTTTGTTTTATGAAA	-29	True	NA	NA	False	AAAAAG	-14	NA	116849720	116833091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116833374_116834934_116835023_116849565
transcript_19616.known	chr10	-	541	3	FSM	ENSG00000165868.16	ENST00000434227.2	541	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCAATCCTTAGGTGAC	-1	False	NA	NA	False	AAAAAG	-39	NA	116850236	116833066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116833374_116834934_116835023_116850090
transcript_19618.known	chr10	-	734	2	FSM	ENSG00000165868.16	ENST00000674400.1	734	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGAGTACACCAACCT	21	True	NA	NA	False	NA	NA	NA	116849670	116847594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116848224_116849565
transcript_19620.nnic	chr10	-	1469	7	NNC	ENSG00000165863.17	novel	966	6	NA	NA	-60	1485	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.5410196624968	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTTTTTAATATTTT	2914	False	NA	-31	True	AATAAA	-20	NA	116670324	116662210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_116662698_116663883_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_19622.known	chr10	-	966	6	FSM	ENSG00000165863.17	ENST00000588184.2	966	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	30.8648667581767	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	-5	True	NA	-16	True	AATAAA	-18	NA	116669966	116663695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116669926
transcript_19623.nic	chr10	-	1170	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	27.8165418411419	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	2914	False	NA	-16	True	AATAAA	-18	NA	116670324	116663695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_19625.nic	chr10	-	1080	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_3	27.8165418411419	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGCATCCTGAGTGGTT	2914	False	NA	-1	True	AATAAA	-31	NA	116670324	116663785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_19632.known	chr10	+	827	3	FSM	ENSG00000232767.2	ENST00000433600.2	827	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTGTAGAATATGG	1	True	NA	18	True	CATAAA	-29	NA	116670064	116672750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_116670279_116670418_116670486_116672204
transcript_19633.known	chr10	-	1791	3	FSM	ENSG00000165863.17	ENST00000588224.1	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	3	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGTTTTAGAATATA	5	True	NA	-1	True	AATAAA	-23	NA	116670264	116664285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116665827_116668257_116668324_116670080
transcript_19635.known	chr10	-	6871	17	FSM	ENSG00000187164.20	ENST00000355371.9	6871	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	10.7993055332276	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCAGTTTTTATATAC	-1	True	NA	NA	False	AATAAA	-19	NA	117005187	116881476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116886567_116901764_116901958_116906626_116906748_116911789_116911844_116915374_116915485_116921433_116921517_116927791_116927892_116929848_116930003_116940465_116940613_116944923_116945019_116948915_116948998_116951908_116952007_116954041_116954211_116960135_116960231_116968651_116968713_116979255_116979309_117005021
transcript_19639.nic	chr10	+	1069	6	ISM	ENSG00000188316.15	ENST00000341276.11	2878	14	0	21346	0	-21272	5prime_fragment	FALSE	canonical	1	1	junction_1	2.33238075793812	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCCGTCATTGATGAACT	-4	True	NA	NA	False	AATATA	-15	NA	116849498	116861255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_116849732_116855622_116855752_116856491_116856683_116858989_116859139_116860793_116860964_116861058
transcript_19646.known	chr10	+	3270	5	FSM	ENSG00000177640.16	ENST00000435944.5	3270	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.10633520177595	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTATTTGACTGTTAGT	6618	False	NA	7	True	AATAAA	-25	NA	118046823	118210153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118206521_118206622_118207435
transcript_19648.known	chr10	+	3232	4	FSM	ENSG00000177640.16	ENST00000426021.5	3232	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.16496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACTTAACTTGC	6	True	NA	NA	False	NA	NA	NA	118046993	118056225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118053275
transcript_19649.known	chr10	+	5817	4	FSM	ENSG00000177640.16	ENST00000454781.6	5817	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.16496580927726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGAGTCCTTGTTTCA	-6	True	NA	NA	False	AATAAA	-7	NA	118046981	118103718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118098195
transcript_19652.known	chr10	+	3931	4	FSM	ENSG00000177640.16	ENST00000454857.6	3931	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	6.23609564462324	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGACTGTTAGTTCATT	-6	True	NA	12	True	AATAAA	-30	NA	118046981	118210158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118206521
transcript_19659.known	chr10	-	13898	9	FSM	ENSG00000165669.14	ENST00000369183.9	13898	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_7	63.7058670767458	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAATTATTACTTTATTG	-13	True	NA	NA	False	AATAAA	-21	NA	118342324	118297924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726_118341928_118342269
transcript_19665.known	chr10	+	1096	4	FSM	ENSG00000232139.6	ENST00000664512.1	1096	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTTGTCACTGGATA	NA	False	NA	NA	False	AATATA	-24	NA	118341436	118359443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118341957_118357526_118357579_118357771_118357849_118358996
transcript_19666.nic	chr10	-	611	4	ISM	ENSG00000165669.14	ENST00000469758.5	1170	9	-34	24834	-21	-296	5prime_fragment	FALSE	canonical	3	169	junction_2	43.6526695123626	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGTTTTAACTCAGG	NA	False	NA	NA	False	AAGAAA	-15	NA	118342349	118335553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_118335642_118336181_118336424_118341726_118341928_118342269
transcript_19667.known	chr10	-	659	3	FSM	ENSG00000165669.14	ENST00000487269.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTTGCGTTTATTTTG	-17	True	NA	NA	False	NA	NA	NA	118342328	118336024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118336424_118341726_118341928_118342269
transcript_19670.known	chr10	-	872	8	FSM	ENSG00000165669.14	ENST00000369172.8	872	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	82.0592120710057	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATTTGGGATTTTGA	-9	True	NA	-27	True	ACTAAA	-12	NA	118342320	118310745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
transcript_19671.known	chr10	-	1000	9	FSM	ENSG00000165669.14	ENST00000470476.5	1000	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	137.173248120762	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTCAGTCTTTCTTT	-4	True	NA	-1	True	CATAAA	-21	NA	118342315	118310719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118310909_118311206_118311314_118322304_118322412_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
transcript_19672.known	chr10	-	517	3	FSM	ENSG00000151893.15	ENST00000489169.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	8	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTCTTACTTGGTTTGT	NA	False	NA	NA	False	NA	NA	NA	118691565	118685996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118686169_118686597_118686642_118691264
transcript_19673.known	chr10	-	549	1	FSM	ENSG00000236058.3	ENST00000420302.1	549	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAATTCAGCATTAAAAT	NA	False	NA	NA	False	AAAAAG	-44	NA	118872602	118872053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118872100_118872600
transcript_19674.known	chr10	-	6659	22	FSM	ENSG00000107581.13	ENST00000369144.8	6659	22	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_17	138.080229069422	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTCATCAAAGCTAA	-6	True	NA	-3	True	AATAAA	-18	NA	119080817	119033669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_19675.known	chr10	-	4495	23	FSM	ENSG00000107581.13	ENST00000541549.2	4495	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	209.513431787018	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAGAAAAACTAAAA	-12	True	NA	NA	False	NA	NA	NA	119080823	119035792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119035984_119036030_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_19682.known	chr10	+	2441	9	FSM	ENSG00000119979.18	ENST00000361432.3	2441	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	79.3579706141733	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	15	True	NA	10	True	AATAAA	-23	NA	119104112	119137984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_19699.known	chr10	+	992	2	FSM	ENSG00000119979.18	ENST00000472379.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTTGAACTCAGCAG	-12	True	NA	NA	False	AATAAA	-15	NA	119104085	119105643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119104198_119104763
transcript_19700.known	chr10	+	851	7	FSM	ENSG00000119979.18	ENST00000487888.5	851	7	0	0	0	0	multi-exon	TRUE	canonical	3	200	junction_1	99.5986389911473	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAAAAGGTTTGTTCTC	6	True	NA	NA	False	NA	NA	NA	119104103	119129612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514
transcript_19701.known	chr10	+	499	5	FSM	ENSG00000119979.18	ENST00000498549.2	499	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	181.382193172318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGGTTT	NA	False	NA	NA	False	NA	NA	NA	119120381	119137180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119137056
transcript_19707.known	chr10	-	1556	14	FSM	ENSG00000183605.17	ENST00000355697.7	1556	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_11	26.8638909887093	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAACCTTTGCCGCCCTC	-32	True	NA	NA	False	NA	NA	NA	119165714	119140766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_19713.known	chr10	-	555	3	FSM	ENSG00000183605.17	ENST00000484960.5	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	93	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGAGTCCACCGTGCCCA	6765	False	NA	-16	True	AATAAA	-32	NA	119155123	119140912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119141320_119147774_119147861_119155061
transcript_19728.known	chr10	-	1553	7	FSM	ENSG00000165672.7	ENST00000298510.4	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	4416	junction_4	207.105783491325	17600	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTTTACCACCAGTA	-1	True	NA	-18	True	AATAAA	-15	NA	119178812	119167719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119168534_119169176_119169343_119172381_119172486_119173736_119173873_119174450_119174593_119177020_119177154_119178754
transcript_19729.known	chr10	+	6798	16	FSM	ENSG00000198873.12	ENST00000392870.3	6798	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.3607908279501	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCATCGGCATCTCTC	2	True	NA	NA	False	AATAAA	-17	NA	119207570	119459745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119207970_119326515_119326612_119380814_119380928_119396694_119396773_119423165_119423267_119424992_119425086_119430374_119430439_119431386_119431528_119436650_119436842_119439730_119439769_119441998_119442089_119443543_119443753_119448122_119448261_119452670_119452809_119453144_119453277_119454968
transcript_19730.known	chr10	-	923	5	FSM	ENSG00000148908.15	ENST00000369103.3	923	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	4.32290411644765	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCACACTACCTTTTAC	-11	True	NA	-25	True	ATTAAA	-26	NA	119542719	119499816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305_119527425_119542589
transcript_19731.known	chr10	-	738	4	FSM	ENSG00000148908.15	ENST00000369101.7	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	3.55902608401044	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATAACTTGGAAGTTT	9106	False	NA	-53	True	AGTAAA	-36	NA	119527477	119499924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305
transcript_19756.nic	chr10	-	2016	13	NIC	ENSG00000151923.18	novel	2321	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_12	74.7789334564815	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-13	True	NA	-28	True	AATAAA	-15	NA	119597038	119575411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119593451_119593514_119596433
transcript_1976.known	chr1	+	2049	8	FSM	ENSG00000053372.5	ENST00000330263.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	22.8249773677157	922	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCCTCTTTTTTCTG	-9	True	NA	20	True	AGTAAA	-17	NA	19251804	19260128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_19763.known	chr10	-	3827	12	FSM	ENSG00000151923.18	ENST00000436547.7	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_10	41.8872946673028	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGAAGTGTCCTT	-2	True	NA	16	True	AATAAA	-33	NA	119596964	119573464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_19764.known	chr10	-	5072	12	FSM	ENSG00000151923.18	ENST00000369093.6	5072	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	52.134917155174	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTTTCTTATTGTCG	864	False	NA	-4	True	AATAAA	-19	NA	119596495	119571801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
transcript_1977.known	chr1	-	1215	7	FSM	ENSG00000162482.5	ENST00000361640.5	1215	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	8.95823643358446	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGCTGTGTGTTAGTCTG	-3	True	NA	NA	False	AATAAA	-8	NA	19288770	19282572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19282893_19283995_19284126_19284685_19284786_19285017_19285115_19285887_19285993_19286184_19286373_19288495
transcript_19771.known	chr10	-	2222	11	FSM	ENSG00000151923.18	ENST00000489822.5	2222	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	43.8703772493467	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-2	True	NA	-15	True	AATAAA	-28	NA	119596964	119575398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_1978.known	chr1	-	1360	7	FSM	ENSG00000053371.13	ENST00000235835.8	1360	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_3	24.9443825784929	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTCTCTGCTGTTAA	-34	True	NA	-5	True	NA	NA	NA	19312144	19303964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308157_19308263_19308454_19308643_19311826
transcript_19780.known	chr10	-	2321	13	FSM	ENSG00000151923.18	ENST00000497671.5	2321	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	69.6696071947206	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-4	True	NA	-28	True	AATAAA	-15	NA	119597029	119575411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_19782.known	chr10	-	371	2	FSM	ENSG00000232823.2	ENST00000441872.2	371	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGGTTTCTGAAAACATA	NA	False	NA	NA	False	AATGAA	-10	NA	119683823	119683126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119683210_119683535
transcript_19783.known	chr10	+	3693	6	FSM	ENSG00000198825.15	ENST00000650409.1	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	30.2086080447279	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	9	True	NA	17	True	AATAAA	-23	NA	119818726	119829147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119819540_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
transcript_19786.known	chr10	+	7148	19	FSM	ENSG00000107651.14	ENST00000369075.8	7148	19	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_8	33.9081912242273	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTAGTGGTGCTTTT	-4	True	NA	NA	False	ATTAAA	-16	NA	119892729	119944657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132_119932319_119933004_119933168_119933685_119933788_119940585
transcript_19794.nic	chr10	+	1566	4	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-27	39995	-27	0	5prime_fragment	FALSE	canonical	3	358	junction_1	6.64997911442	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	-31	True	NA	12	True	AATAAA	-19	NA	119892702	119904662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083
transcript_19795.nic	chr10	+	2165	4	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-27	39396	-27	599	5prime_fragment	FALSE	canonical	3	358	junction_1	6.64997911442	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTAATTTTTGGTACCT	-31	True	NA	5	True	AATAAA	-13	NA	119892702	119905261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083
transcript_19800.known	chr10	+	285	2	FSM	ENSG00000107651.14	ENST00000470478.1	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAATAAGGAAGTATAATT	11	True	NA	NA	False	AAGAAA	-43	NA	119892744	119898327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119892946_119898243
transcript_19801.nnic	chr10	-	523	2	Genic_Genomic	ENSG00000220842.6	novel	483	1	NA	NA	-43	57	multi-exon	FALSE	canonical	0	0	junction_1	0	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAACTTTCAACTCTTT	-1	True	NA	NA	False	AATAAA	-35	NA	120355226	120354643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_-_120355055_120355114
transcript_19802.known	chr10	-	483	1	FSM	ENSG00000220842.6	ENST00000495531.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67748	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	42	False	NA	NA	False	NA	NA	NA	120355183	120354700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_120354700_120355200
transcript_19806.known	chr10	+	3458	7	FSM	ENSG00000203805.11	ENST00000398250.6	3458	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	6.87184270936277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTATTCCTCAACCCCTG	-10	True	NA	NA	False	ATTAAA	-16	NA	120457226	120592065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_120457362_120503817_120503927_120513910_120514002_120518832_120518897_120520970_120521096_120575130_120575302_120589302
transcript_19812.nnic	chr10	+	985	4	NIC	ENSG00000203805.11	novel	3458	7	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	10.2740233382816	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTGGCCACCCAGCG	-31	True	NA	18	True	AATAAA	-19	NA	120457205	120589851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_120457362_120503817_120503927_120575130_120575302_120589302
transcript_19815.known	chr10	+	4545	29	FSM	ENSG00000120008.16	ENST00000263461.11	4545	29	0	0	0	0	multi-exon	TRUE	canonical	1	77	junction_28	33.6030815824492	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	-15	True	NA	15	True	AATAAA	-17	NA	120851361	120909524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
transcript_19819.nnic	chr10	+	1244	5	NNC	ENSG00000120008.16	novel	3010	22	NA	NA	-1697	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	97.1352150355369	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	NA	False	NA	15	True	AATAAA	-17	NA	120902343	120909524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_120902351_120905374_120905417_120905875_120906022_120906775_120906856_120908555
transcript_19822.known	chr10	-	1364	3	FSM	ENSG00000227165.10	ENST00000630905.4	1401	3	0	37	0	-24	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTGTTATGTAAAATAA	101	False	NA	NA	False	NA	NA	NA	120851457	120762812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_120763676_120776734_120776885_120851106
transcript_19823.known	chr10	-	588	2	FSM	ENSG00000236762.1	ENST00000433839.1	588	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCCCCCTTTGTCTGTA	26	False	NA	NA	False	AAGAAA	-4	NA	121133723	121133089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121133355_121133400
transcript_19824.known	chr10	-	4624	18	FSM	ENSG00000066468.24	ENST00000358487.10	4624	18	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	158.663928523571	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCGTGTCTTACCAAATG	-14	True	NA	-1	True	AATAAA	-24	NA	121598444	121478331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121565437_121565705_121593708_121593968_121597961
transcript_19828.nic	chr10	-	951	4	NIC	ENSG00000066468.24	novel	579	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	204.550455606652	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTCTCTATCGTTTGTCC	2112	False	NA	-8	True	AATAAA	-17	NA	121596645	121564323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_121564580_121565437_121565705_121593708_121593968_121596476
transcript_19830.known	chr10	-	4835	12	FSM	ENSG00000107669.19	ENST00000540606.7	5138	12	293	10	-5	-9	multi-exon	FALSE	canonical	3	21	junction_11	66.1119761346592	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTCTATCTGCAGT	NA	False	NA	-23	True	GATAAA	-19	NA	121928492	121740441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121928346
transcript_1984.known	chr1	+	1805	9	FSM	ENSG00000040487.13	ENST00000375155.7	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	16.7760990698076	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	11	True	NA	25	True	AATAAA	-34	NA	19312325	19329300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_19840.nnic	chr10	-	1177	8	NNC	ENSG00000107669.19	novel	2161	8	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	78.8423899243268	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCAGAAGCCCCTGCTT	-9	True	NA	-8	True	AATAAA	-27	NA	121928023	121888995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_121889157_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_19842.nic	chr10	-	1556	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	214.101284442667	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-31	True	NA	36	True	ATTAAA	-26	NA	121974814	121957090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974305
transcript_19843.nic	chr10	-	1473	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_10	210.257580124951	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-32	True	NA	36	True	ATTAAA	-26	NA	121974815	121957090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974389
transcript_19845.known	chr10	-	1391	11	FSM	ENSG00000107672.15	ENST00000369023.8	1391	11	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_10	46.5232200089375	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-22	True	NA	36	True	ATTAAA	-26	NA	121975217	121957090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974873
transcript_19855.known	chr10	-	822	5	FSM	ENSG00000107672.15	ENST00000464321.5	822	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	307.758021828839	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATCGTCCAAGAAAAGT	-24	True	NA	NA	False	AATATA	-29	NA	121974807	121965342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974389
transcript_19856.known	chr10	-	541	3	FSM	ENSG00000107672.15	ENST00000459911.5	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	25.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	8008	False	NA	36	True	ATTAAA	-26	NA	121959785	121957090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121957260_121959323_121959411_121959500
transcript_1986.nic	chr1	+	1802	9	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	29.0247739009282	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	NA	False	NA	9	True	AATAAA	-18	NA	19312281	19329284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_19866.known	chr10	+	14010	12	FSM	ENSG00000107679.15	ENST00000368990.8	3741	12	-12	-10257	0	10248	multi-exon	FALSE	canonical	3	124	junction_11	57.0347146717326	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCATGACTCGACTTTG	-30	True	NA	NA	False	AATAAA	-17	NA	122374695	122442602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122374807_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_19868.known	chr10	+	1214	6	FSM	ENSG00000166033.13	ENST00000420892.1	1214	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	5.32916503778969	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTAGTGCTTATTTT	4694	False	NA	22	True	ATTAAA	-18	NA	122506690	122514907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122506886_122507369_122507403_122508655_122508771_122510095_122510154_122511969_122512066_122514190
transcript_19869.known	chr10	+	892	4	FSM	ENSG00000286135.1	ENST00000652090.1	892	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATTATATATACA	0	True	NA	NA	False	TATAAA	-5	NA	122672849	122679494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122672928_122675640_122675671_122676755_122676892_122678846
transcript_19870.known	chr10	-	1976	8	FSM	ENSG00000138161.14	ENST00000368900.5	1976	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	43.8648201749374	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	9716	False	NA	-11	True	AATAAA	-36	NA	122846175	122832157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122836900_122837403_122837555_122839016_122839232_122845761
transcript_19871.known	chr10	-	2125	8	FSM	ENSG00000138161.14	ENST00000368901.5	2125	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	28.7686053374373	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	9716	False	NA	-11	True	AATAAA	-36	NA	122846175	122832157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122845761
transcript_19878.known	chr10	-	728	4	FSM	ENSG00000213185.7	ENST00000368898.8	728	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGATTGTTGATTA	-10	True	NA	NA	False	AATAAA	-36	NA	122879581	122849077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122849440_122850423_122850551_122855644_122855787_122879484
transcript_19879.known	chr10	-	1958	9	FSM	ENSG00000138161.14	ENST00000392790.6	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	24.0022785376722	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	-1	True	NA	-11	True	AATAAA	-36	NA	122845857	122832157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122841177_122841329_122845761
transcript_19881.known	chr10	-	2991	6	FSM	ENSG00000119965.13	ENST00000368891.9	2991	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	47.7912125813941	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTTTCACGTATTG	20	False	NA	-4	True	AATAAA	-21	NA	122954311	122930902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122932662_122937704_122938160_122948648_122948856_122951953_122952027_122952828_122953029_122954014
transcript_19886.nic	chr10	-	2184	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	-105	5877	-21	-4175	5prime_fragment	FALSE	canonical	3	123	junction_1	3.41869858279434	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGGGAATTACACAGC	-1	True	NA	NA	False	AATAAA	-19	NA	122954332	122936777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_19888.nic	chr10	-	1702	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	-105	6359	-21	-4657	5prime_fragment	FALSE	canonical	3	123	junction_1	3.41869858279434	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGTAGTTTACAAGCT	-1	True	NA	-23	True	ATTAAA	-21	NA	122954332	122937259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_19889.nic	chr10	-	1241	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	-182	6897	-98	-5195	5prime_fragment	FALSE	canonical	3	123	junction_1	3.41869858279434	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTAGTCAAGTTAATC	NA	False	NA	NA	False	AATATA	-33	NA	122954409	122937797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_19890.nic	chr10	-	1053	5	ISM	ENSG00000119965.13	ENST00000481909.2	2913	6	-84	6987	0	-5285	5prime_fragment	FALSE	canonical	3	123	junction_1	3.41869858279434	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTAAAAATGCAATGGCCT	20	False	NA	NA	False	NA	NA	NA	122954311	122937887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_122938160_122948648_122948856_122951953_122952027_122952828_122953033_122954014
transcript_19892.known	chr10	+	1705	7	FSM	ENSG00000179988.15	ENST00000368887.7	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	33.1934565171444	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122980039	122990390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_19895.nic	chr10	+	885	6	NIC	ENSG00000179988.15	novel	818	5	NA	NA	60	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	41.3424721079908	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	-22	True	NA	13	True	ATTAAA	-17	NA	122954440	122990390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_122954569_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_19898.known	chr10	+	1173	6	FSM	ENSG00000179988.15	ENST00000406217.8	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	22.1846793981793	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	-18	True	NA	13	True	ATTAAA	-17	NA	122980400	122990390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_1990.known	chr1	+	1548	8	FSM	ENSG00000040487.13	ENST00000400548.6	1548	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	33.3589017584604	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	26	False	NA	25	True	AATAAA	-34	NA	19312340	19329300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_19903.nic	chr10	+	809	5	NIC	ENSG00000179988.15	novel	818	5	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	37.4265948223987	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122954345	122990390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_122954569_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_19905.known	chr10	+	818	5	FSM	ENSG00000179988.15	ENST00000465232.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.6831198370289	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	13	True	ATTAAA	-17	NA	122954380	122990390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122954569_122983271_122983515_122986299_122986376_122986868_122986963_122990173
transcript_19907.known	chr10	+	696	5	FSM	ENSG00000179988.15	ENST00000483455.5	696	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	42.8952211790544	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATTGTACAGAAGTAT	76	False	NA	-42	True	NA	NA	NA	122980530	122990335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122980696_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_19908.known	chr10	-	4532	5	FSM	ENSG00000095574.12	ENST00000368886.10	4532	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	16.2230545829076	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTTTTTCTTTTTTGG	6	True	NA	-1	True	AATAAA	-21	NA	123008795	122990806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122994724_122995993_122996177_122998492_122998672_123007025_123007177_123008693
transcript_1991.known	chr1	+	1512	8	FSM	ENSG00000040487.13	ENST00000469076.5	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	37.6210969905917	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	15	True	NA	9	True	AATAAA	-18	NA	19312329	19329284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325525_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_19916.known	chr10	+	5848	11	FSM	ENSG00000196177.13	ENST00000358776.7	5848	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	14.208800090085	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGGTACTCTTATAA	9	True	NA	10	True	AATAAA	-18	NA	123009005	123058290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_123009072_123034355_123034516_123037746_123037848_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048_123051187_123053060_123053161_123053694
transcript_1993.nnic	chr1	+	1670	8	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	34.2070526204698	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	NA	False	NA	9	True	AATAAA	-18	NA	19312283	19329284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_19312359_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_19938.known	chr10	+	1361	8	FSM	ENSG00000154473.18	ENST00000368858.9	1361	8	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_7	515.023835390565	4195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATGTTTTTGAATGT	-8	True	NA	30	True	AATAAA	-21	NA	123154414	123165365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123165046
transcript_19939.known	chr10	+	7703	8	FSM	ENSG00000154473.18	ENST00000368865.9	7703	8	0	0	0	0	multi-exon	TRUE	canonical	3	1279	junction_7	403.138908556141	2382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGCCTCATTTGTACC	14	True	NA	6	True	AATAAA	-13	NA	123154401	123170467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123163819
transcript_19940.known	chr10	-	4809	8	FSM	ENSG00000182022.18	ENST00000435907.6	4809	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	10.889050857234	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTGGTGCATGAGT	-1	True	NA	-3	True	NA	NA	NA	124093598	124007667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124093468
transcript_19944.nnic	chr10	-	999	2	NNC	ENSG00000182022.18	novel	4809	8	NA	NA	-61	-37479	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCTCACCTATCGAC	29	False	NA	NA	False	AAAAAG	-13	NA	124093659	124083491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_124084300_124093468
transcript_19949.known	chr10	-	1864	9	FSM	ENSG00000065154.12	ENST00000539214.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	241.381829266414	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	1398	False	NA	-1	True	AATAAA	-19	NA	124418976	124397302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124418872
transcript_19951.known	chr10	-	2039	10	FSM	ENSG00000065154.12	ENST00000368845.6	2039	10	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_4	37.9320379912923	2384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-1	True	NA	-1	True	AATAAA	-19	NA	124418923	124397302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124411972_124412201_124418872
transcript_19952.known	chr10	+	1634	7	FSM	ENSG00000107902.14	ENST00000368842.10	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	63.0740305778324	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	-12	True	NA	9	True	AGTAAA	-18	NA	124461822	124614141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124517179_124517272_124613263
transcript_19954.known	chr10	+	840	6	FSM	ENSG00000107902.14	ENST00000392757.8	840	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	106.295813652279	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGACTATTTTGGGA	-1	True	NA	9	True	AATAAA	-22	NA	124461833	124498514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124498327
transcript_1997.known	chr1	-	1462	9	FSM	ENSG00000077549.19	ENST00000433834.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	601.966361186404	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGGCTCCGAGCCTGC	979	False	NA	-29	True	AATAAA	-15	NA	19484664	19339358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19484189
transcript_19970.nnic	chr10	-	1242	6	NNC	ENSG00000203791.15	novel	4920	6	NA	NA	352	192	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	157.128482459419	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGGATGGCGGTT	708	False	NA	-46	True	AATATA	-14	NA	124791516	124759953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_124760504_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791330
transcript_19975.known	chr10	-	1013	6	FSM	ENSG00000203791.15	ENST00000464099.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	138.330618447255	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTAAACAGTTAAAAACT	-12	True	NA	-21	True	ATTAAA	-15	NA	124791868	124760145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124760504_124765391_124765609_124774674_124774783_124789038_124789158_124790272_124790339_124791723
transcript_19977.known	chr10	+	2955	9	FSM	ENSG00000165660.8	ENST00000298492.6	2955	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	12.854352375752	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATTGTTTTAATGTCT	5	True	NA	15	True	AATAAA	-18	NA	124801818	124836667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_124801902_124806830_124806922_124816575_124816613_124819383_124819451_124826594_124826786_124828755_124828876_124829392_124829478_124831348_124831464_124834501
transcript_19984.nic	chr10	+	2027	3	ISM	ENSG00000165660.8	ENST00000298492.6	2955	9	-16	18255	-16	-18255	5prime_fragment	FALSE	canonical	3	111	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATTAGACTCAGTTAT	-11	True	NA	NA	False	NA	NA	NA	124801802	124818412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_124801902_124806830_124806922_124816575
transcript_19986.nic	chr10	+	599	2	ISM	ENSG00000165660.8	ENST00000298492.6	2955	9	-16	29337	-16	-29337	5prime_fragment	FALSE	canonical	3	120	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAATTCAAAGAGTAT	-11	True	NA	NA	False	NA	NA	NA	124801802	124807330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_124801902_124806830
transcript_19997.known	chr10	-	1918	11	FSM	ENSG00000175029.17	ENST00000531469.5	1918	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	240.460412542273	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	0	True	NA	-40	True	AATAAA	-18	NA	125158716	124989224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125158634
transcript_19999.known	chr10	-	6939	11	FSM	ENSG00000175029.17	ENST00000337195.9	6939	11	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_10	197.400709218584	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGCTTTCTGAAAGAGC	547	False	NA	-1	True	AATAAA	-22	NA	125160513	124984316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160318
transcript_2.known	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00003_+_0_1000
transcript_20.known	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00046_+_0_500
transcript_20000.known	chr10	-	2036	11	FSM	ENSG00000175029.17	ENST00000411419.6	2036	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	225.446246364849	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	6	True	NA	-40	True	AATAAA	-18	NA	125161026	124989224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160826
transcript_20004.known	chr10	-	2014	11	FSM	ENSG00000175029.17	ENST00000494626.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	285.692492025954	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	561	False	NA	-40	True	AATAAA	-18	NA	125160499	124989224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125133511_125133613_125160318
transcript_20015.nnic	chr10	-	2347	10	NNC	ENSG00000175029.17	novel	6939	11	NA	NA	6882	251	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_9	235.865205279898	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAAGTTTCACAAGCT	0	True	NA	20	True	AGTAAA	-31	NA	125151834	124988883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125151560
transcript_20019.nic	chr10	-	2169	10	NIC	ENSG00000175029.17	novel	6939	11	NA	NA	85	251	combination_of_known_junctions	FALSE	canonical	3	172	junction_9	189.323943429128	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAAGTTTCACAAGCT	646	False	NA	20	True	AGTAAA	-31	NA	125160414	124988883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160318
transcript_20020.nnic	chr10	-	2450	10	NIC	ENSG00000175029.17	novel	2036	11	NA	NA	-33	251	combination_of_known_splicesites	FALSE	canonical	3	69	junction_9	217.90200538457	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAAGTTTCACAAGCT	NA	False	NA	20	True	AGTAAA	-31	NA	125161203	124988883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160826
transcript_20038.known	chr10	+	4483	25	FSM	ENSG00000107938.18	ENST00000356792.9	4483	25	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_6	20.3463073362766	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	-8	True	NA	15	True	AATAAA	-19	NA	125719708	125764139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729002_125729105_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_20045.known	chr10	-	764	5	FSM	ENSG00000224023.10	ENST00000527483.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.24264068711928	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGTGTTCTAATAGTT	29	True	NA	NA	False	AATAAA	-16	NA	125719460	125700435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125700583_125707051_125707201_125707400_125707760_125709497_125709568_125719421
transcript_20049.nic	chr10	+	791	4	ISM	ENSG00000107938.18	ENST00000525091.5	4211	20	-11	24996	-11	-11649	5prime_fragment	FALSE	canonical	3	128	junction_2	12.8322510366134	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAATGAGAATGGTGA	144	False	NA	NA	False	AAGAAA	-4	NA	125719690	125724100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810
transcript_2005.known	chr1	-	1675	9	FSM	ENSG00000077549.19	ENST00000264202.8	1675	9	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_8	206.212269276103	8666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCCTTCTGTGTTCC	-11	True	NA	-23	True	AATAAA	-21	NA	19485539	19338774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_20050.nic	chr10	+	1039	4	ISM	ENSG00000107938.18	ENST00000525091.5	4211	20	-11	24748	-11	-11401	5prime_fragment	FALSE	canonical	3	128	junction_2	12.8322510366134	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTTTCAGTCAGCGATG	144	False	NA	NA	False	AATAAA	-20	NA	125719690	125724348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810
transcript_20056.known	chr10	-	718	3	FSM	ENSG00000224023.10	ENST00000528844.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGCAATGAGTGTT	NA	False	NA	-10	True	NA	NA	NA	125719546	125707236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125707760_125709497_125709568_125719421
transcript_2006.known	chr1	-	1686	10	FSM	ENSG00000077549.19	ENST00000375142.5	1686	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	712.994225384819	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	-1	True	NA	6	True	AAGAAA	-36	NA	19485485	19338822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19339618_19342751_19342865_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_20060.known	chr10	-	1336	10	FSM	ENSG00000188690.15	ENST00000368797.10	1336	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	117.840235011877	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	-14	True	NA	-13	True	AATAAA	-19	NA	125823258	125788585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125789006_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_20064.known	chr10	-	441	3	FSM	ENSG00000188690.15	ENST00000616800.4	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	200.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTGGTGCAGTGGC	NA	False	NA	NA	False	AATAAA	-18	NA	125796163	125784979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125785261_125794879_125794979_125796102
transcript_20065.known	chr10	-	857	4	FSM	ENSG00000188690.15	ENST00000484541.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	172.020024674132	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTATGGTTGCTGTG	NA	False	NA	-9	True	AATAAA	-23	NA	125796190	125788581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125789006_125789282_125789529_125794879_125794979_125796102
transcript_20076.known	chr10	+	2337	7	FSM	ENSG00000107949.17	ENST00000299130.7	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_6	358.570619109945	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTCCATCTCTTTAT	-4	True	NA	15	True	AATAAA	-20	NA	125823545	125842805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254
transcript_20077.known	chr10	+	1234	7	FSM	ENSG00000107949.17	ENST00000278100.11	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_6	309.363324695521	4970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGTTATTTTCT	-4	True	NA	NA	False	AATAAA	-27	NA	125823545	125836551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125836103
transcript_20078.known	chr10	+	1433	8	FSM	ENSG00000107949.17	ENST00000368759.5	1433	8	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_7	457.269446758446	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAGTAGTTGAGTCTT	-4	True	NA	7	True	ATTAAA	-18	NA	125823545	125853695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254_125841331_125853124
transcript_20079.known	chr10	-	3050	11	FSM	ENSG00000089876.12	ENST00000284690.4	3050	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	17.8706463229509	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCACTGAGTTTTCTGGT	-2	True	NA	NA	False	AATAAA	-20	NA	125881292	125836336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125836856_125838205_125838388_125839000_125839189_125840846_125840997_125841742_125841935_125852292_125852452_125852542_125852643_125853960_125854204_125859602_125859976_125866989_125867184_125880542
transcript_20084.nnic	chr10	+	1288	12	NNC	ENSG00000203780.12	novel	1271	11	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.89497172334371	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	NA	False	NA	14	True	AATACA	-14	NA	125896521	126009592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_125896656_125988550_125988676_125989429_125989448_125994825_125994961_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_20101.known	chr10	+	1271	11	FSM	ENSG00000203780.12	ENST00000368693.6	1271	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	6.87386354243376	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	-14	True	NA	14	True	AATACA	-14	NA	125896563	126009592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125896656_125980160_125980339_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_20105.nnic	chr10	+	1135	10	NIC	ENSG00000203780.12	novel	1271	11	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.37027731190089	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	NA	False	NA	14	True	AATACA	-14	NA	125896521	126009592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_125896656_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_20108.nic	chr10	+	1411	10	ISM	ENSG00000203780.12	ENST00000368693.6	1271	11	-34	0	-34	0	intron_retention	FALSE	canonical	1	3	junction_1	6.43102050155013	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	-5	True	NA	14	True	AATACA	-14	NA	125896529	126009592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_125896656_125980160_125980339_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221
transcript_20113.nnic	chr10	+	1241	9	NIC	ENSG00000203780.12	novel	1271	11	NA	NA	-42	0	intron_retention	FALSE	canonical	0	0	junction_1	6.8818148042504	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	NA	False	NA	14	True	AATACA	-14	NA	125896521	126009592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_125896656_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221
transcript_2012.known	chr1	+	583	5	FSM	ENSG00000173436.15	ENST00000467029.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	2224.7463900409	2031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTCCATTGCATGGC	-9	True	NA	3	True	AATAAA	-12	NA	19597000	19626623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19617257_19617337_19622099_19622148_19623473_19623584_19626386
transcript_20123.nnic	chr10	+	834	4	NNC	ENSG00000203780.12	novel	1271	11	NA	NA	-8	-63441	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0.816496580927726	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTAGTCCTCTGATA	-22	True	NA	NA	False	AATAAA	-20	NA	125896555	125917455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_125896656_125907456_125907503_125913092_125913190_125916864
transcript_20134.known	chr10	+	6797	52	FSM	ENSG00000150760.13	ENST00000280333.9	6797	52	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_40	17.3989972621576	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACAGTGTCTGACCAATTA	NA	False	NA	17	True	AATAAA	-18	NA	126905408	127452517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_126905564_126970701_126970786_126977947_126977989_126981917_126981974_126987520_126987618_126990454_126990604_126996747_126996884_126998091_126998250_126999353_126999436_127000171_127000308_127008731_127008805_127012294_127012375_127018709_127018836_127023199_127023325_127024684_127024784_127026351_127026425_127031649_127031754_127032136_127032321_127037718_127037817_127042624_127042715_127043063_127043165_127052680_127052816_127061667_127061777_127106230_127106302_127110247_127110355_127125473_127125602_127127668_127127765_127248007_127248110_127257334_127257430_127339005_127339085_127343645_127343747_127354668_127354728_127362063_127362213_127373780_127373867_127374057_127374215_127380081_127380123_127381277_127381369_127384789_127384910_127403054_127403145_127404324_127404430_127409036_127409179_127409312_127409392_127410839_127410925_127415151_127415239_127418364_127418542_127419665_127419750_127425873_127426012_127433282_127433429_127439026_127439226_127444125_127444280_127447393_127447546_127451331
transcript_20136.nnic	chr10	+	696	2	NNC	ENSG00000150760.13	novel	6797	52	NA	NA	-61	-207782	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTAGTCCCCTTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	126905347	126920314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_126905564_126919834
transcript_20137.known	chr10	-	2435	1	FSM	ENSG00000279725.1	ENST00000623953.1	2435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGTGCCATGGATAT	NA	False	NA	NA	False	AATGAA	-43	NA	127736996	127734561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_127734600_127737000
transcript_20138.known	chr10	+	4957	18	FSM	ENSG00000132334.17	ENST00000306042.9	4957	18	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	2.96577945081307	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTTTGTCTTTAA	-10	True	NA	8	True	GATAAA	-19	NA	128047569	128085855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_128047684_128047763_128047838_128049529_128049667_128056122_128056214_128060938_128061016_128061678_128061716_128063082_128063181_128066074_128066195_128068122_128068287_128069691_128069828_128070300_128070451_128070807_128070902_128072137_128072215_128073336_128073472_128076602_128076729_128077616_128077784_128079559_128079696_128082831
transcript_2014.known	chr1	+	657	5	FSM	ENSG00000173436.15	ENST00000481464.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2270.05534073511	2053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGCATGGCCTTTGT	29	True	NA	9	True	AATAAA	-18	NA	19597038	19626629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19600786_19600972_19622099_19622148_19623473_19623584_19626386
transcript_20140.known	chr10	-	12716	15	FSM	ENSG00000148773.14	ENST00000368654.8	12716	15	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	26.3156855529634	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGTATTTTTATTATA	8	True	NA	0	True	AATAAA	-25	NA	128126423	128096658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_128099256_128101257_128101702_128102578_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128114927_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_20150.known	chr10	+	959	2	FSM	ENSG00000170430.10	ENST00000482547.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCACTCCTATGCTTGGT	16	False	NA	NA	False	AAGAAA	-8	NA	129467261	129537164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_129467297_129536240
transcript_20158.nnic	chr10	-	1002	5	NNC	ENSG00000237489.5	novel	843	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	8.25757228245687	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-8	True	NA	-8	True	ATTAAA	-23	NA	130110830	130063895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_130064384_130079565_130079629_130079736_130079902_130091155_130091315_130110703
transcript_20160.nnic	chr10	-	1029	4	NNC	ENSG00000237489.5	novel	843	4	NA	NA	309	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	9.46337971105226	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	329	False	NA	-8	True	ATTAAA	-23	NA	130110493	130063895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_130064384_130079565_130079629_130079736_130079902_130110180
transcript_20163.known	chr10	-	843	4	FSM	ENSG00000237489.5	ENST00000637128.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.85861230093008	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-8	True	NA	-8	True	ATTAAA	-23	NA	130110830	130063895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_130064384_130079565_130079629_130079736_130079902_130110703
transcript_20172.known	chr10	+	1318	11	FSM	ENSG00000108010.12	ENST00000331244.10	1318	11	0	0	0	0	multi-exon	FALSE	canonical	3	1623	junction_4	143.855517794765	6955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAATCTCTTTTTCTTA	-11	True	NA	12	True	ATTAAA	-25	NA	130136390	130179672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341
transcript_20173.known	chr10	+	3827	12	FSM	ENSG00000108010.12	ENST00000368644.5	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_11	468.067364650901	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTTGCCTTTTTTTG	-3	True	NA	27	True	NA	NA	NA	130136398	130182881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341_130179421_130180112
transcript_20174.known	chr10	+	1921	13	FSM	ENSG00000108010.12	ENST00000481034.1	1921	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	657.585793937862	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGCACCTGTAGT	-3	True	NA	NA	False	AATAAA	-15	NA	130136398	130184521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341_130179421_130180112_130180322_130183867
transcript_20175.known	chr10	+	317	2	FSM	ENSG00000108010.12	ENST00000496195.1	317	2	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCCTCCTATTGAGA	NA	False	NA	13	True	AATAAA	-24	NA	130179373	130180382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_130179421_130180112
transcript_20177.known	chr10	-	2861	6	FSM	ENSG00000176171.12	ENST00000368636.9	1542	6	-90	-1229	-46	1229	multi-exon	FALSE	canonical	3	799	junction_1	100.547302300957	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCGTATCTGAATG	-2	True	NA	-11	True	ATTAAA	-17	NA	131982013	131966454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_131968570_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_20178.known	chr10	-	3066	5	FSM	ENSG00000176171.12	ENST00000540159.4	3066	5	0	0	0	0	multi-exon	FALSE	canonical	3	821	junction_4	94.0329064742763	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTCATGATGTGTGTTG	-1	True	NA	-119	True	TATAAA	-27	NA	131981923	131968227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_20179.nnic	chr10	+	774	3	Genic_Genomic	ENSG00000279982.1	novel	3109	1	NA	NA	2159	3503	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTATCTTGCATAGAAGAG	NA	False	NA	NA	False	AATAAA	-18	NA	131998896	132003349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_131999232_132001257_132001392_132003044
transcript_20180.known	chr10	+	2664	14	FSM	ENSG00000151640.13	ENST00000338492.9	2664	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_12	5.38351637136083	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	-6	True	NA	23	True	ATTAAA	-17	NA	132186947	132205759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_20181.known	chr10	-	1866	13	FSM	ENSG00000165752.17	ENST00000462160.5	1866	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.6465297368808	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	NA	False	NA	-9	True	NA	NA	NA	132249108	132207491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132208152_132209033_132209102_132209294_132209365_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
transcript_20184.known	chr10	-	2096	12	FSM	ENSG00000165752.17	ENST00000298630.8	2096	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	8.58212634269523	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	7	True	NA	-9	True	NA	NA	NA	132307950	132207491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132208152_132209033_132209102_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132307571
transcript_20187.nnic	chr10	-	394	3	NNC	ENSG00000165752.17	novel	607	2	NA	NA	-402	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	14	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCTTGCTTGTTATTG	301	False	NA	1	True	AATAAA	-25	NA	132332249	132330280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_132330486_132331435_132331529_132332153
transcript_20189.known	chr10	-	733	2	FSM	ENSG00000165752.17	ENST00000368619.3	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGAGATTAATGCTGC	10	True	NA	NA	False	NA	NA	NA	132331831	132324036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132324374_132331435
transcript_20192.known	chr10	-	607	2	FSM	ENSG00000165752.17	ENST00000456004.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCTTGCTTGTTATTG	4	True	NA	1	True	AATAAA	-25	NA	132331837	132330280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132330486_132331435
transcript_20193.nnic	chr10	-	623	2	NNC	ENSG00000165752.17	novel	607	2	NA	NA	-62	-10	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	325	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGCGTATTCCCTCTTG	641	False	NA	-9	True	AATAAA	-15	NA	132331909	132330290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_132330486_132331481
transcript_20197.known	chr10	+	7971	11	FSM	ENSG00000148814.18	ENST00000368614.8	7971	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	7.863841300535	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATCCTATTCTGTCCT	14	True	NA	NA	False	AATAAA	-17	NA	132332192	132381508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
transcript_20203.nnic	chr10	+	1731	9	NNC	ENSG00000148814.18	novel	1809	9	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	8.47699091659299	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTGTGTGTGTGCTGT	2028	False	NA	5	True	AATAAA	-15	NA	132332100	132353396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132348962_132349058_132351606_132351754_132353037
transcript_20209.known	chr10	+	1738	8	FSM	ENSG00000148814.18	ENST00000625755.2	1738	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	10.1398385850373	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTTGTGTGTGTGCTGT	-24	True	NA	5	True	AATAAA	-15	NA	132332154	132353396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132352881
transcript_20211.nnic	chr10	+	1176	3	NNC	ENSG00000171813.14	novel	2013	3	NA	NA	11367	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	2264	False	NA	63	True	AATAAA	-18	NA	132408566	132417859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_132408826_132409761_132409880_132417060
transcript_20213.known	chr10	+	2615	3	FSM	ENSG00000171813.14	ENST00000305233.6	2615	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	-18	True	NA	63	True	AATAAA	-18	NA	132397199	132417859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_132397352_132404625_132406290_132417060
transcript_20214.known	chr10	-	1590	2	FSM	ENSG00000226900.2	ENST00000656988.1	1590	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTGTGTTTTAGT	-2	True	NA	NA	False	AAGAAA	-25	NA	132518280	132510758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132512162_132518093
transcript_20215.known	chr10	-	1578	2	FSM	ENSG00000226900.2	ENST00000654872.1	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTGTGTTTTAGT	NA	False	NA	NA	False	AAGAAA	-25	NA	132518291	132510758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132512162_132518116
transcript_20217.known	chr10	-	1825	9	FSM	ENSG00000171811.14	ENST00000368585.3	1825	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	8.44744783943648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAAATTGAAGTTTATC	4448	False	NA	NA	False	TATAAA	-18	NA	132942823	132929184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132929805_132934751_132934863_132936960_132937056_132937551_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_20220.known	chr10	-	1156	6	FSM	ENSG00000171811.14	ENST00000475340.1	1156	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.88767014308903	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTCTACCGAATTG	19	True	NA	-11	True	AATAAA	-15	NA	132942543	132937114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_20222.nic	chr10	-	903	4	ISM	ENSG00000171811.14	ENST00000475340.1	1156	6	-59	3467	-32	-3467	5prime_fragment	FALSE	canonical	3	22	junction_1	6.12825877028341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTTTCTCCAGGGC	4669	False	NA	NA	False	AATAAA	-11	NA	132942602	132940581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_132941061_132941590_132941723_132941979_132942105_132942435
transcript_20224.nnic	chr10	-	704	2	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGATGAATGATATTCA	NA	False	NA	NA	False	AATAAA	-17	NA	133159943	133143890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_-_133144201_133159549
transcript_20225.known	chr10	+	1966	4	FSM	ENSG00000171798.19	ENST00000683259.1	1966	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	23.3666428910958	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTGGTCTCATTCA	3	True	NA	10	True	ATTAAA	-19	NA	133160440	133180840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133179261
transcript_20227.known	chr10	+	2459	3	FSM	ENSG00000151650.8	ENST00000325980.10	2459	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCCGTGGAGATTGCTTT	-2	True	NA	6	True	GATAAA	-18	NA	133237854	133241928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133238156_133239675_133239837_133239931
transcript_20229.known	chr10	-	408	1	FSM	ENSG00000273980.1	ENST00000611956.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTCTGTTTTTTGTTTT	7056	False	NA	NA	False	AGTAAA	-22	NA	133257551	133257143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133257100_133257600
transcript_20230.nic	chr10	-	991	2	ISM	ENSG00000151651.16	ENST00000485491.6	2441	20	9337	-545	-3666	0	3prime_fragment	FALSE	canonical	1	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTAGATTCTTGTTAGA	9337	False	NA	-6	True	AATAAA	-13	NA	133267531	133262422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_133263234_133267351
transcript_20232.known	chr10	-	3927	18	FSM	ENSG00000130640.15	ENST00000684487.1	3927	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	54.7177090315457	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCCACAAACCGCTTC	188	False	NA	-79	True	GGGGCT	-45	NA	133308977	133278710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288279_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_20233.known	chr10	-	3929	18	FSM	ENSG00000130640.15	ENST00000252936.8	3929	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	24.6387041855824	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGCTGTCAGTCTCAGT	-7	True	NA	-3	True	AGTAAA	-16	NA	133308872	133278634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_20235.known	chr10	-	3262	17	FSM	ENSG00000130640.15	ENST00000683383.1	3262	17	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	56.2792979256138	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	188	False	NA	NA	False	NA	NA	NA	133308977	133279286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133279902_133281272_133281437_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_20238.known	chr10	+	1084	6	FSM	ENSG00000198546.15	ENST00000361518.10	1084	6	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_5	34.8137903710584	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	-2	True	NA	30	True	TTTAAA	-27	NA	133308913	133313161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
transcript_20241.nic	chr10	+	992	5	ISM	ENSG00000198546.15	ENST00000361518.10	1084	6	385	0	-141	0	3prime_fragment	FALSE	canonical	3	482	junction_4	37.110476957323	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	383	False	NA	30	True	TTTAAA	-27	NA	133309298	133313161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
transcript_20242.known	chr10	+	587	5	FSM	ENSG00000165828.15	ENST00000463201.2	587	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	0.866025403784439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGTGGCTCACCTCTGTA	-17	True	NA	NA	False	AATAAA	-16	NA	133347367	133352548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133347426_133350094_133350162_133351380_133351434_133352006_133352114_133352246
transcript_20243.known	chr10	+	744	5	FSM	ENSG00000165828.15	ENST00000433452.6	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.866025403784439	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGCCGGGTGCCTGTA	-12	True	NA	NA	False	AATACA	-14	NA	133347372	133352683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133347426_133350094_133350162_133351380_133351434_133352006_133352141_133352246
transcript_20246.known	chr10	-	2163	5	FSM	ENSG00000130640.15	ENST00000683031.1	2163	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	14.4633156641207	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTAATCCCAGCACTTA	-13	True	NA	NA	False	AATGAA	-44	NA	133309134	133296755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_20248.known	chr10	+	605	4	FSM	ENSG00000198546.15	ENST00000463816.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	226.51318332985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATGTATTTTTAAACA	30	False	NA	-14	True	NA	NA	NA	133309439	133313117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133309464_133310163_133310289_133311715_133311842_133312787
transcript_20249.known	chr10	-	1306	2	FSM	ENSG00000130640.15	ENST00000480198.1	1306	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGACTGGTATTAACC	17	True	NA	NA	False	NA	NA	NA	133308848	133301700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133302981_133308822
transcript_20256.known	chr10	-	628	6	FSM	ENSG00000148803.12	ENST00000368551.1	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	89.318755029389	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGTGAAAATGATGGA	-31	True	NA	NA	False	NA	NA	NA	133357737	133355202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
transcript_20258.known	chr10	-	867	6	FSM	ENSG00000148803.12	ENST00000465384.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	107.287650733903	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGTCCAATTCCAGCTC	22	False	NA	NA	False	NA	NA	NA	133358001	133355168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357463_133357922
transcript_20264.known	chr10	-	590	5	FSM	ENSG00000148803.12	ENST00000447176.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	115.006521554214	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATTCCAGCTCTGTTC	28	False	NA	NA	False	NA	NA	NA	133357995	133355163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357922
transcript_20275.known	chr10	-	689	6	FSM	ENSG00000148803.12	ENST00000278025.9	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_5	32.8426551910773	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTCTGTTCTCACGC	4	True	NA	NA	False	NA	NA	NA	133358019	133355157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_20276.known	chr10	-	762	6	FSM	ENSG00000148803.12	ENST00000368552.7	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	87.3576556461997	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCTCTGTTCTCAC	-2	True	NA	NA	False	NA	NA	NA	133358025	133355159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_20281.known	chr10	-	1277	8	FSM	ENSG00000127884.5	ENST00000368547.4	1277	8	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_2	135.237055663342	6713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGCCTTGTAGTCATG	-5	True	NA	-31	True	ATTAAA	-20	NA	133373354	133362484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
transcript_20284.known	chr10	+	1283	11	FSM	ENSG00000148824.19	ENST00000477902.6	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	155.57008067106	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACCTGTAACCTTTAA	4779	False	NA	NA	False	NA	NA	NA	133394093	133420464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394185_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_20288.known	chr10	+	3424	11	FSM	ENSG00000148824.19	ENST00000317502.11	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_7	73.9257059486076	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGGAGCAAAGTGGGT	9	True	NA	18	True	NA	NA	NA	133394156	133422520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_20294.known	chr10	+	2730	10	FSM	ENSG00000148824.19	ENST00000460848.5	2730	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	53.7031162164546	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCAGATCACGAAGTG	-11	True	NA	NA	False	NA	NA	NA	133394195	133421307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133402246_133402691_133402774_133419479_133419593_133420025
transcript_20304.known	chr10	+	953	9	FSM	ENSG00000148824.19	ENST00000432508.3	953	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	179.288829476351	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTTGAGGCTCAAGAC	26	True	NA	NA	False	NA	NA	NA	133394173	133420219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_2031.known	chr1	+	3678	3	FSM	ENSG00000173436.15	ENST00000617872.4	3678	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2255	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGACTCCATGGCGCTT	-33	True	NA	17	True	AATAAA	-23	NA	19596976	19629821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19623473_19623584_19626386
transcript_20311.known	chr10	+	693	6	FSM	ENSG00000148824.19	ENST00000498790.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_5	28.045677028733	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCGTTCTGTGAATTTC	17	True	NA	-68	True	NA	NA	NA	133394223	133399804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528
transcript_20319.nnic	chr11	-	698	5	NNC	ENSG00000177951.18	novel	2916	3	NA	NA	-23	1946	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	149.344191383529	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATCATGTCTCATTG	1267	False	NA	-6	True	NA	NA	NA	207422	200977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_201226_201560_201742_205610_205668_205951_206044_207302
transcript_20321.nnic	chr11	-	517	4	NNC	ENSG00000177951.18	novel	2916	3	NA	NA	-23	1946	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	142.260324757116	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATCATGTCTCATTG	1267	False	NA	-6	True	NA	NA	NA	207422	200977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_201226_205610_205668_205951_206044_207302
transcript_20323.known	chr11	-	2819	4	FSM	ENSG00000177951.18	ENST00000382762.8	2792	4	-29	2	-29	-2	multi-exon	FALSE	canonical	3	253	junction_1	24.5809320861155	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATATGGTCTCTGTCGT	1261	False	NA	-6	True	AATAAA	-33	NA	207428	202925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_205470_205610_205668_205951_206044_207302
transcript_20327.known	chr11	-	2916	3	FSM	ENSG00000177951.18	ENST00000325147.13	2916	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	7.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGGTCTCTGTCGTCC	-4	True	NA	-4	True	AATAAA	-35	NA	207382	202923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_205668_205951_206044_207302
transcript_20331.known	chr11	+	3506	10	FSM	ENSG00000177963.15	ENST00000526104.6	3506	10	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_7	38.3679392909249	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	3	True	NA	13	True	AATAAA	-20	NA	207707	215113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_208939_209270_209319_209406_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
transcript_2034.known	chr1	+	438	5	FSM	ENSG00000173436.15	ENST00000485362.1	438	5	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_1	2256.8091827844	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATTAAACAAAAAGAG	60	False	NA	-14	True	NA	NA	NA	19597069	19626606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19597833_19597854_19622099_19622148_19623473_19623584_19626386
transcript_20340.known	chr11	-	1475	7	FSM	ENSG00000142082.15	ENST00000525319.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	75.187912740162	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTATTTTTAATGAGAG	-10	True	NA	-80	True	NA	NA	NA	236354	216205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233438_236193
transcript_20341.known	chr11	-	2882	7	FSM	ENSG00000142082.15	ENST00000382743.9	2882	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	27.1825107171668	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGGGCATTTTCCTTG	2	True	NA	NA	False	TATAAA	-17	NA	236342	215029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
transcript_20343.known	chr11	-	1588	7	FSM	ENSG00000142082.15	ENST00000532837.5	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	61.0584874435069	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	1	True	NA	-53	True	GGGGCT	-22	NA	236343	216178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
transcript_20345.known	chr11	-	1225	7	FSM	ENSG00000142082.15	ENST00000529382.5	1225	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.2810956630511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGGTGAAACCAGAATA	46	True	NA	NA	False	NA	NA	NA	236834	216610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236615
transcript_20348.nic	chr11	-	1073	4	NIC	ENSG00000142082.15	novel	1588	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	96.6471244614482	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	-10	True	NA	-53	True	GGGGCT	-22	NA	236354	216178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_216719_218831_219042_224077_224240_236193
transcript_2035.known	chr1	+	481	2	FSM	ENSG00000173436.15	ENST00000498067.1	481	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACAGTCAAGTGATTTG	-19	True	NA	NA	False	AATAAA	-42	NA	19596990	19598195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19597833
transcript_20357.known	chr11	+	1589	13	FSM	ENSG00000185627.19	ENST00000532097.6	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	871	junction_3	93.0164262673833	11648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTTTTCTTG	-12	True	NA	25	True	AATAAA	-19	NA	236975	252984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_20359.known	chr11	+	1427	12	FSM	ENSG00000185627.19	ENST00000352303.9	1427	12	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_10	295.807481507318	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTATAATAAACCCCTCT	1	True	NA	-6	True	NA	NA	NA	237025	252953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251819_251937_252504
transcript_2036.known	chr1	+	669	5	FSM	ENSG00000173436.15	ENST00000498642.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	2271.5250383828	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGAGGTGGTCTTAA	31	True	NA	-33	True	NA	NA	NA	19597040	19626587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19625391_19625633_19626386
transcript_20360.known	chr11	+	1632	12	FSM	ENSG00000185627.19	ENST00000525665.5	1632	12	0	0	0	0	multi-exon	FALSE	canonical	3	886	junction_9	85.8082621385591	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCTTTGTTCTTCT	12	True	NA	7	True	AATAAA	-1	NA	236999	252966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_238997_239077_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_20361.known	chr11	+	1489	12	FSM	ENSG00000185627.19	ENST00000382671.8	1489	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	294.458601111591	7041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	13	False	NA	22	True	AATAAA	-16	NA	237037	252981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_238997_239077_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_20369.known	chr11	+	1591	11	FSM	ENSG00000185627.19	ENST00000431206.6	1591	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	317.910506274958	7025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	-11	True	NA	22	True	AATAAA	-16	NA	236976	252981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_2037.known	chr1	+	335	4	FSM	ENSG00000173436.15	ENST00000462646.5	335	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2087.01748914569	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCATATCTTCTACATGGA	-15	True	NA	NA	False	NA	NA	NA	19596994	19623551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19614500_19614595_19622099_19622148_19623473
transcript_20376.known	chr11	+	3699	14	FSM	ENSG00000142102.16	ENST00000409548.7	3699	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	84.5989494528195	1250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCTGAGACCTGTGGAC	1	True	NA	NA	False	NA	NA	NA	289125	296107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_289240_289803_290076_290389_290601_290677_291114_291975_292096_292545_292678_292885_292998_293162_293236_293365_293503_293593_293728_293829_293926_294098_294197_294266_294479_294555
transcript_2038.known	chr1	+	1623	4	FSM	ENSG00000158747.15	ENST00000602662.1	1623	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.8357739838062	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTCCAGAGGCCCTAGG	-31	True	NA	NA	False	NA	NA	NA	19596978	19658056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19655011_19655201_19655323_19655436_19656865
transcript_20386.known	chr11	-	736	2	FSM	ENSG00000206013.2	ENST00000382614.2	736	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCCTGGCCTCTTTCC	0	True	NA	NA	False	ATTAAA	-19	NA	299526	298199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_298714_299304
transcript_2039.known	chr1	+	2109	4	FSM	ENSG00000158747.15	ENST00000622566.4	2109	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.8357739838062	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCCTCCTCACTGACTGG	180	False	NA	28	True	AATAAA	-18	NA	19643408	19658456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19643626_19655011_19655201_19655323_19655436_19656865
transcript_20395.known	chr11	+	588	3	FSM	ENSG00000185201.18	ENST00000533141.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	901.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTCGCCCTGCCCCCAG	NA	False	NA	NA	False	NA	NA	NA	307630	309230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_307793_308230_308439_309012
transcript_20396.known	chr11	+	634	3	FSM	ENSG00000185201.18	ENST00000527146.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	53.5	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGTGACTTCACC	97	False	NA	29	True	AATAAA	-15	NA	308319	309392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_308754_308890_309012
transcript_20398.known	chr11	+	841	3	FSM	ENSG00000185885.17	ENST00000680588.1	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5936.5	39935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	768	False	NA	25	True	AATAAA	-16	NA	310040	315271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_310172_313996_314357_314921
transcript_20400.known	chr11	+	844	3	FSM	ENSG00000185885.17	ENST00000328221.5	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5933	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCATTCAATAAAGTGC	13	False	NA	-6	True	NA	NA	NA	313526	315240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_313692_313996_314357_314921
transcript_20402.known	chr11	+	730	3	FSM	ENSG00000185885.17	ENST00000528780.5	730	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5936.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	-8	True	NA	26	True	AATAAA	-17	NA	313505	315272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_313692_314163_314357_314921
transcript_20404.known	chr11	+	835	3	FSM	ENSG00000185885.17	ENST00000681577.1	835	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	397	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314357_314642_314810_314921
transcript_20407.known	chr11	+	804	3	FSM	ENSG00000185885.17	ENST00000679765.1	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	381.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314357_314673_314810_314921
transcript_20409.known	chr11	+	556	2	FSM	ENSG00000185201.18	ENST00000602569.2	556	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTGACTTCACCT	30	False	NA	30	True	AATAAA	-16	NA	308252	309393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_309023
transcript_2041.nic	chr1	+	229	3	ISM	ENSG00000173436.15	ENST00000498642.5	669	5	-1	3003	1	33	5prime_fragment	FALSE	canonical	3	4480	junction_2	69	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTACAGAATATATATTT	30	True	NA	NA	False	NA	NA	NA	19597039	19623584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_19597110_19622099_19622148_19623473
transcript_20410.known	chr11	+	382	2	FSM	ENSG00000288681.1	ENST00000399815.2	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	0	875	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	77	False	NA	26	True	AATAAA	-17	NA	308407	315272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_314921
transcript_20411.known	chr11	+	439	2	FSM	ENSG00000185201.18	ENST00000680619.1	439	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGAGGCATCATTGAGG	-5	True	NA	NA	False	NA	NA	NA	308192	309165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_308972
transcript_20412.known	chr11	+	183	2	FSM	ENSG00000185201.18	ENST00000680099.1	183	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGAGGCATCATTGAGG	178	False	NA	NA	False	NA	NA	NA	308508	309165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308539_309012
transcript_20413.known	chr11	+	183	2	FSM	ENSG00000185201.18	ENST00000679636.1	183	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGAGGCATCATTGAGG	367	False	NA	NA	False	NA	NA	NA	308697	309165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308728_309012
transcript_20415.known	chr11	+	666	2	FSM	ENSG00000185885.17	ENST00000680938.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	11	True	NA	25	True	AATAAA	-16	NA	314039	315271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314361_314926
transcript_20417.known	chr11	+	80	2	FSM	ENSG00000185885.17	ENST00000525554.1	80	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTATGCCTCCACCGCCA	162	False	NA	NA	False	NA	NA	NA	314417	314962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314457_314921
transcript_20418.known	chr11	+	603	3	FSM	ENSG00000185201.18	ENST00000680197.1	603	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	903.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTATATGTTTCTGGTGC	29	False	NA	14	True	NA	NA	NA	308132	309377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_309012_309253_309320
transcript_20419.known	chr11	+	685	2	FSM	ENSG00000185201.18	ENST00000680344.1	685	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGACTTCACCTGG	32	False	NA	32	True	AATAAA	-18	NA	308135	309395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308443_309017
transcript_2042.known	chr1	+	455	1	FSM	ENSG00000226396.1	ENST00000457263.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1290	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGATTCCTCAAAATATT	28	False	NA	NA	False	NA	NA	NA	19608113	19608568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19608100_19608600
transcript_20420.known	chr11	+	502	2	FSM	ENSG00000185201.18	ENST00000680011.1	502	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGACTTCACCTGG	-5	True	NA	32	True	AATAAA	-18	NA	308192	309395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_309139
transcript_20421.known	chr11	+	611	2	FSM	ENSG00000185885.17	ENST00000681426.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314342_314963
transcript_20422.known	chr11	+	662	2	FSM	ENSG00000185885.17	ENST00000681938.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	0	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	11	True	NA	25	True	AATAAA	-16	NA	314039	315271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314357_314926
transcript_20423.known	chr11	+	708	2	FSM	ENSG00000185885.17	ENST00000680696.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	11	True	NA	26	True	AATAAA	-17	NA	314039	315272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314357_314881
transcript_20425.known	chr11	-	517	3	FSM	ENSG00000142089.17	ENST00000681304.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-4	True	NA	-18	True	AATAAA	-18	NA	320860	319675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319991_320275_320347_320729
transcript_20426.known	chr11	-	725	3	FSM	ENSG00000142089.17	ENST00000531688.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	128.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGCGACTTCACC	15	True	NA	-21	True	AATAAA	-15	NA	320841	319678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319991_320112_320249_320564
transcript_20431.known	chr11	+	1151	2	FSM	ENSG00000251661.3	ENST00000602429.1	1151	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATAATAACGATTGAT	1339	False	NA	NA	False	ATTAAA	-17	NA	318652	325631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_318747_324574
transcript_20432.known	chr11	+	1034	2	FSM	ENSG00000251661.3	ENST00000602756.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACGTGATCATAGGACAG	1358	False	NA	NA	False	NA	NA	NA	318671	325069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_318747_324110
transcript_20433.known	chr11	-	591	2	FSM	ENSG00000142089.17	ENST00000681198.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	15	True	NA	-18	True	AATAAA	-18	NA	320841	319675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319986_320560
transcript_20434.known	chr11	-	345	2	FSM	ENSG00000142089.17	ENST00000679793.1	345	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	9001	False	NA	-18	True	AATAAA	-18	NA	320494	319675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319991_320464
transcript_20435.known	chr11	-	651	2	FSM	ENSG00000142089.17	ENST00000680209.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-4	True	NA	-18	True	AATAAA	-18	NA	320860	319675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_320031_320564
transcript_20437.known	chr11	-	611	2	FSM	ENSG00000142089.17	ENST00000399808.5	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	5145	junction_1	0	31268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-4	True	NA	-18	True	AATAAA	-18	NA	320860	319675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319991_320564
transcript_20438.known	chr11	-	587	2	FSM	ENSG00000142089.17	ENST00000679382.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	15	True	NA	-18	True	AATAAA	-18	NA	320841	319675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319986_320564
transcript_20439.known	chr11	+	3750	20	FSM	ENSG00000182272.12	ENST00000329962.11	3750	20	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	45.9545722935318	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTCTGTGCCTGTTC	-6	True	NA	28	True	AATGAA	-25	NA	369498	382117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_369955_372108_372213_372661_372755_372851_372948_373025_373117_373190_373292_373448_373517_373749_373829_375460_375528_375638_375774_375846_375957_376073_376175_376250_376352_376420_377328_379417_379702_379865_380020_380129_380203_380291_380446_380824_380952_381668
transcript_20445.known	chr11	-	1598	10	FSM	ENSG00000185187.13	ENST00000397632.7	1598	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	62.4792311171293	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	18	True	NA	-6	True	AATAAA	-17	NA	417325	405715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
transcript_20446.known	chr11	-	1639	10	FSM	ENSG00000185187.13	ENST00000332725.7	1639	10	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_9	67.107063895624	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	0	True	NA	-6	True	AATAAA	-17	NA	417397	405715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
transcript_20451.nnic	chr11	-	1507	9	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_8	72.628764962651	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	3	True	NA	-6	True	AATAAA	-17	NA	417394	405715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417293
transcript_20460.nnic	chr11	-	1504	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	74.7327210252426	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	14	True	NA	-6	True	AATAAA	-17	NA	417414	405715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417324
transcript_20464.nnic	chr11	-	1312	8	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_7	70.1258344197146	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-1	True	NA	-6	True	AATAAA	-17	NA	417398	405715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
transcript_20465.nnic	chr11	-	1297	8	NIC	ENSG00000185187.13	novel	1639	10	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_7	74.2999986266377	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	14	True	NA	-6	True	AATAAA	-17	NA	417414	405715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417324
transcript_2047.known	chr1	+	6515	8	FSM	ENSG00000169914.6	ENST00000375120.4	6515	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	4.94046184736874	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAGTTGTTTTTATCA	-17	True	NA	NA	False	AATAAA	-19	NA	19882394	19912945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19882735_19890384_19890534_19894367_19894481_19897539_19897663_19904266_19904399_19904890_19904988_19906431_19906617_19907569
transcript_20472.known	chr11	-	608	3	FSM	ENSG00000185187.13	ENST00000526395.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	107	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	14	True	NA	-6	True	AATAAA	-17	NA	407135	405715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_406060_406348_406539_407061
transcript_20473.known	chr11	-	2867	23	FSM	ENSG00000185101.13	ENST00000332826.7	2867	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	8.81958751682538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTTCCTGGCCTC	-15	True	NA	-18	True	AGTAAA	-13	NA	442011	417937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_418590_418719_418814_418887_418990_419581_419730_420462_420616_420717_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_429653_429757_429819_430082_430180_430268_430404_431693_431768_431847_431907_431998_432055_433313_433460_433814_433938_434023_434099_441920
transcript_20476.known	chr11	-	5487	16	FSM	ENSG00000185101.13	ENST00000532094.5	5487	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	7.10555338371959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGCTTTCCTGGCCTC	0	True	NA	-18	True	AGTAAA	-13	NA	441996	417937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_418590_418719_418814_418887_418990_419581_420861_420944_421043_421140_421199_428087_428200_428357_428395_428474_428640_428721_428827_429569_430180_430268_430404_431693_433460_433814_433938_434023_434099_441920
transcript_2048.known	chr1	-	813	5	FSM	ENSG00000188257.12	ENST00000649436.1	813	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.8613807855649	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTATGCATT	-4	True	NA	1	True	AATAAA	-20	NA	19979621	19975430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978485_19978733_19978880_19979579
transcript_20483.known	chr11	-	1829	11	FSM	ENSG00000023191.17	ENST00000533410.5	1829	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	129.326911352587	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATAATCATTAAAGCA	8	True	NA	-35	True	NA	NA	NA	507218	494545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_507112
transcript_20487.known	chr11	-	1952	11	FSM	ENSG00000023191.17	ENST00000354420.7	1952	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	139.68120847129	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-16	True	NA	-4	True	ATTAAA	-15	NA	507242	494514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_507112
transcript_20489.known	chr11	-	1725	10	FSM	ENSG00000023191.17	ENST00000438658.6	1725	10	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	112.079116676845	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTTATAATCATTAAAG	-9	True	NA	-37	True	NA	NA	NA	506785	494547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_506608
transcript_2049.known	chr1	-	608	5	FSM	ENSG00000188257.12	ENST00000482011.2	608	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.06155281280883	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTGAATTTCCCTCTC	-1	True	NA	NA	False	NA	NA	NA	19979618	19975672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978880_19979579
transcript_20490.known	chr11	-	1722	10	FSM	ENSG00000023191.17	ENST00000397604.7	1722	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	93.4409432558512	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-27	True	NA	-4	True	ATTAAA	-15	NA	507253	494514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_507112
transcript_20491.known	chr11	-	1864	10	FSM	ENSG00000023191.17	ENST00000397614.5	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	120.382723012898	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCTCTTGTCCTTCCTG	405	False	NA	-2	True	ATTAAA	-17	NA	506821	494512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_506608
transcript_2050.known	chr1	-	871	5	FSM	ENSG00000188257.12	ENST00000400520.8	871	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.41869858279434	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTATGCATT	4405	False	NA	1	True	AATAAA	-20	NA	19979607	19975430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978912_19979579
transcript_20500.known	chr11	-	1791	10	FSM	ENSG00000023191.17	ENST00000356187.9	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_9	99.4932840961987	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATATTTTGGACACTTT	NA	False	NA	-50	True	NA	NA	NA	507300	494560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_507112
transcript_20501.known	chr11	-	2014	11	FSM	ENSG00000023191.17	ENST00000397615.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	127.653006231737	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-24	True	NA	-4	True	ATTAAA	-15	NA	506800	494514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_506608
transcript_20503.nic	chr11	-	944	6	NIC	ENSG00000174775.18	novel	1070	6	NA	NA	48	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	115.685781321647	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	262	False	NA	-5	True	AGTAAA	-18	NA	535291	532241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535256
transcript_20504.known	chr11	-	1070	6	FSM	ENSG00000174775.18	ENST00000311189.8	1070	6	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_5	9.09065454189081	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-23	True	NA	-5	True	AGTAAA	-18	NA	535576	532241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535415
transcript_20506.nic	chr11	+	1576	6	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	184.67116721351	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	-36	True	NA	27	True	AATAAA	-19	NA	560966	564025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395_563479_563557
transcript_20508.nic	chr11	+	1489	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_4	159.164223366936	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTGTGTGGAGGCTG	-36	True	NA	23	True	AATAAA	-15	NA	560966	564021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563557
transcript_20511.known	chr11	+	1679	4	FSM	ENSG00000099849.15	ENST00000414138.6	1679	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	192.461828827317	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	-32	True	NA	-18	True	NA	NA	NA	560970	563980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_561034_561761_561893_562083_562777_563188
transcript_20512.known	chr11	+	2210	2	FSM	ENSG00000254815.6	ENST00000527620.5	2210	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	1924	False	NA	20	True	ATTAAA	-14	NA	557594	560106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_559477_559778
transcript_20513.known	chr11	+	527	3	FSM	ENSG00000254815.6	ENST00000527113.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	17.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	916	False	NA	20	True	ATTAAA	-14	NA	558891	560106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_558935_559320_559477_559778
transcript_20514.known	chr11	-	367	2	FSM	ENSG00000247095.4	ENST00000534540.2	966	2	72	527	58	-382	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGAGGGAGAGGCAGA	7478	False	NA	NA	False	NA	NA	NA	568369	567525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_567854_568330
transcript_20516.known	chr11	-	1965	2	FSM	ENSG00000247095.4	ENST00000500447.2	1992	2	27	0	7	0	multi-exon	FALSE	canonical	3	15	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTTTTGTTGTTA	-6	True	NA	-3	True	TATAAA	-16	NA	568420	565659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_567556_568351
transcript_20517.known	chr11	-	816	2	FSM	ENSG00000247095.4	ENST00000533920.1	816	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCCCGCCCTGCTGTGG	7390	False	NA	-100	True	NA	NA	NA	568457	567143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_567854_568351
transcript_20518.known	chr11	+	5539	18	FSM	ENSG00000070047.13	ENST00000264555.10	5539	18	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_2	39.4010520998411	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTGCTCTTGTAAA	-6	True	NA	11	True	NA	NA	NA	576469	612222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
transcript_20520.known	chr11	-	1923	11	FSM	ENSG00000185507.21	ENST00000525445.6	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	11.7029910706622	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-1	True	NA	-5	True	AATAAA	-16	NA	615950	612554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_20522.known	chr11	-	1807	10	FSM	ENSG00000185507.21	ENST00000348655.11	1807	10	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	19.9598362149692	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	9247	False	NA	-5	True	AATAAA	-16	NA	615921	612554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_20523.known	chr11	-	1596	9	FSM	ENSG00000185507.21	ENST00000469048.6	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	16.7779617355625	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTCTAATAAAAAGAACT	33	True	NA	-33	True	NA	NA	NA	615612	612582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614475_614535_614796_615008_615096_615260_615344
transcript_20524.known	chr11	-	526	4	FSM	ENSG00000070031.4	ENST00000176195.4	526	4	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_3	2.49443825784929	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGGAGTTGTCTGTGTC	-1	True	NA	-7	True	AATAAA	-19	NA	627181	626308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_626531_626696_626790_626887_626990_627072
transcript_20525.known	chr11	+	1399	4	FSM	ENSG00000069696.7	ENST00000176183.6	1399	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.88561808316413	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCTGTGAAGGCTCCTG	-8	True	NA	12	True	ATTAAA	-17	NA	637268	640706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_637590_639432_639546_639647_640307_640400
transcript_20526.known	chr11	-	1764	11	FSM	ENSG00000177030.19	ENST00000682936.1	1764	11	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_7	31.5754651588856	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAAGGTCTCCCTGCCC	6404	False	NA	-26	True	AATAAA	-4	NA	691647	644243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500
transcript_2053.known	chr1	+	5562	2	FSM	ENSG00000162543.6	ENST00000375099.4	5562	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCTCACCTCGTGTTT	-10	True	NA	NA	False	AATAAA	-19	NA	20186095	20196050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_20186154_20190546
transcript_20532.nic	chr11	+	803	6	NIC	ENSG00000177042.16	novel	1423	5	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_5	23.7436307248913	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	135	False	NA	22	True	AATAAA	-23	NA	695782	704129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944_703147_703799
transcript_20534.known	chr11	+	1597	6	FSM	ENSG00000177106.17	ENST00000527832.5	1597	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	61.5740204956603	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCGTGTGTCTCAGT	3	True	NA	15	True	ATTAAA	-15	NA	724561	727722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_20535.known	chr11	+	1572	5	FSM	ENSG00000177042.16	ENST00000397512.8	1572	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	46.8881648180007	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	-5	True	NA	22	True	AATAAA	-23	NA	695642	704129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_695823_698868_698889_700141_700236_700614_700708_702944
transcript_20536.known	chr11	+	1423	5	FSM	ENSG00000177042.16	ENST00000397510.9	1423	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	20.2051973511767	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	8	True	NA	22	True	AATAAA	-23	NA	695815	704129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944
transcript_20540.nnic	chr11	+	1251	5	NNC	ENSG00000177106.17	novel	750	3	NA	NA	-164	0	intron_retention	FALSE	canonical	1	4	junction_1	106.436307245225	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	132	False	NA	17	True	ATTAAA	-17	NA	725916	727724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_725957_726097_726171_726303_726485_726618_726752_726900
transcript_20544.nic	chr11	+	723	4	ISM	ENSG00000177106.17	ENST00000527832.5	1597	6	1348	674	-171	-3	3prime_fragment	FALSE	canonical	3	241	junction_2	9.93310961716756	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGTATGTATTTTGTA	125	False	NA	3	True	NA	NA	NA	725909	727048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_726171_726303_726485_726618_726752_726900
transcript_20545.nic	chr11	+	1399	4	ISM	ENSG00000177106.17	ENST00000527832.5	1597	6	1348	-2	-171	0	3prime_fragment	FALSE	canonical	3	241	junction_2	9.93310961716756	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	125	False	NA	17	True	ATTAAA	-17	NA	725909	727724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_726171_726303_726485_726618_726752_726900
transcript_2055.known	chr1	-	510	2	FSM	ENSG00000187980.7	ENST00000442226.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCTCACCGTGTGTG	773	False	NA	NA	False	TTTAAA	-38	NA	20186486	20184241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20184625_20186359
transcript_20550.known	chr11	-	567	2	FSM	ENSG00000177030.19	ENST00000526857.2	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACGCTGTTCTAACAAT	451	False	NA	NA	False	NA	NA	NA	706624	697485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_698000_706571
transcript_20551.known	chr11	+	2047	5	FSM	ENSG00000177042.16	ENST00000492023.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.8688329276503	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGAATTCTCCTAATTA	-6	True	NA	14	True	AATAAA	-15	NA	695801	704121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_695847_698868_700236_700614_700708_702944_703147_703781
transcript_20552.known	chr11	+	3030	21	FSM	ENSG00000177106.17	ENST00000318562.13	3030	21	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	56.2919843316968	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTCTCAGTTCTCT	-9	True	NA	20	True	ATTAAA	-20	NA	706230	727727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_20553.known	chr11	+	342	2	FSM	ENSG00000177106.17	ENST00000534027.1	342	2	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTATTTTGTATCA	167	False	NA	6	True	NA	NA	NA	726560	727051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_726752_726900
transcript_20554.known	chr11	+	491	2	FSM	ENSG00000177106.17	ENST00000534449.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCGTGTGTCTCAGT	233	False	NA	15	True	ATTAAA	-15	NA	726626	727722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_726752_727356
transcript_2056.known	chr1	-	2326	2	FSM	ENSG00000162545.6	ENST00000375078.4	2326	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTCTCTTTTCTCTGCTT	23	True	NA	-2	True	AATAAA	-21	NA	20486210	20482390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20483720_20485213
transcript_20563.known	chr11	+	1199	8	FSM	ENSG00000177156.11	ENST00000319006.8	1199	8	0	0	0	0	multi-exon	FALSE	canonical	3	1917	junction_3	102.156742312977	6095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	17	True	NA	21	True	ATTAAA	-15	NA	747463	765012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763945_764287_764434_764812
transcript_20564.known	chr11	+	1231	8	FSM	ENSG00000177156.11	ENST00000528097.5	1231	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	712.943939748764	5010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	-19	True	NA	21	True	ATTAAA	-15	NA	747427	765012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763941_764287_764434_764812
transcript_20567.known	chr11	-	790	8	FSM	ENSG00000177225.17	ENST00000397472.6	790	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	23.8079047068534	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	16	True	NA	-30	True	AATAAA	-21	NA	777471	767221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_767374_770313_770399_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_20568.known	chr11	-	756	7	FSM	ENSG00000177225.17	ENST00000526325.5	756	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24.2538656712698	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGGTGTCCTGGTGT	0	True	NA	-36	True	AATAAA	-15	NA	777487	767227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_767374_771332_771468_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_20569.known	chr11	+	610	4	FSM	ENSG00000255284.3	ENST00000525941.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.68331255192114	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	18	True	NA	NA	False	AATACA	-15	NA	777607	784297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_777696_778112_778219_783529_783672_784023
transcript_2057.known	chr1	-	812	2	FSM	ENSG00000162545.6	ENST00000489020.1	812	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAATGGTTCTGTGCAC	34	True	NA	NA	False	NA	NA	NA	20484645	20483186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20483720_20484366
transcript_20572.known	chr11	-	1605	2	FSM	ENSG00000184524.6	ENST00000330106.5	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTCTTGCATCCTCAT	3	True	NA	-5	True	AATAAA	-15	NA	790090	787114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_788659_790029
transcript_20574.known	chr11	-	2984	16	FSM	ENSG00000177595.19	ENST00000347755.10	2984	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	29.8281000996637	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	10	True	NA	-12	True	NA	NA	NA	805231	799183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
transcript_20583.known	chr11	-	2796	10	FSM	ENSG00000177542.11	ENST00000320230.9	2796	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	128.231561377585	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	8978	False	NA	-6	True	AATAAA	-18	NA	796263	790474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_796042
transcript_20584.known	chr11	-	2640	10	FSM	ENSG00000177542.11	ENST00000628067.3	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_9	51.9358578761662	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-10	True	NA	-6	True	AATAAA	-18	NA	798281	790474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_798216
transcript_20586.known	chr11	-	2886	15	FSM	ENSG00000177595.19	ENST00000411829.6	2886	15	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_3	30.6691528865	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	8371	False	NA	-12	True	NA	NA	NA	804469	799183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_799566_799814_800015_800130_800245_800383_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093
transcript_20587.known	chr11	-	4496	10	FSM	ENSG00000177595.19	ENST00000527357.5	4496	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	29.2515695474218	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	11	True	NA	-13	True	NA	NA	NA	805230	799184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_800245_800383_800452_800542_800667_800761_801121_801217_801366_801444_802091_802194_802397_802542_802598_802681_804464_805178
transcript_20588.known	chr11	-	3994	12	FSM	ENSG00000177595.19	ENST00000534525.5	3994	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	31.7927170827555	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	1	True	NA	-13	True	NA	NA	NA	809499	799184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_799566_799814_800245_800332_800452_800542_800667_800761_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_804464_809411
transcript_20589.known	chr11	-	661	2	FSM	ENSG00000177595.19	ENST00000530911.1	661	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGACAGTGCCAGGAGG	3087	False	NA	NA	False	NA	NA	NA	809753	805776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_806096_809411
transcript_20599.known	chr11	+	353	4	FSM	ENSG00000177600.9	ENST00000532004.5	353	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3756.21816311152	5709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCCATGAGCACTTTGT	-5	True	NA	34	True	AATAAA	-22	NA	809964	812880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_810049_811596_811646_812534_812634_812759
transcript_206.known	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	1392	junction_4	896.223325962899	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1963	8939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
transcript_2060.known	chr1	-	2428	4	FSM	ENSG00000090432.7	ENST00000264198.5	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	13.9124245031395	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGCCTGTTGCTTTGT	-23	True	NA	-2	True	ATTAAA	-15	NA	20508151	20499447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20501420_20502068_20502190_20503221_20503310_20507904
transcript_20605.known	chr11	+	462	5	FSM	ENSG00000177600.9	ENST00000321153.9	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	5928	junction_1	1236.54283690457	168968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	-3	True	NA	30	True	AATAAA	-18	NA	809966	812876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_810040_810233_810358_811596_811646_812534_812634_812759
transcript_20606.known	chr11	+	489	3	FSM	ENSG00000177600.9	ENST00000525722.1	489	3	0	0	0	0	multi-exon	FALSE	canonical	3	6779	junction_2	999	2836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAGTATTCCATGAGCAC	1067	False	NA	29	True	AATAAA	-17	NA	811371	812875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_811646_812534_812634_812759
transcript_20607.known	chr11	+	313	4	FSM	ENSG00000177600.9	ENST00000530398.1	313	4	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_1	3742.87483092876	3341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTCAAGTATTCCATGA	17	True	NA	25	True	AATAAA	-13	NA	810268	812871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_810322_811596_811646_812534_812634_812759
transcript_2061.known	chr1	+	809	4	FSM	ENSG00000158825.6	ENST00000375071.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.18241233033047	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	7	True	NA	20	True	TATAAA	-20	NA	20589096	20618903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_20589284_20604927_20605040_20613841_20613900_20618451
transcript_20612.known	chr11	+	714	4	FSM	ENSG00000177685.17	ENST00000526531.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	65.2703778311588	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACTCAGGATGCAGGCT	25	False	NA	NA	False	NA	NA	NA	830484	831780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_830714_830865_831033_831223_831296_831534
transcript_20613.known	chr11	+	1728	5	FSM	ENSG00000177685.17	ENST00000527763.5	1728	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	96.2870058730668	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	2	True	NA	13	True	AATAAA	-14	NA	829304	831985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_829541_829985_830133_830249_830714_830865_831296_831534
transcript_20614.nic	chr11	+	837	3	ISM	ENSG00000177685.17	ENST00000450448.5	1663	8	2141	5	-84	0	3prime_fragment	FALSE	canonical	3	84	junction_1	106.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	834	False	NA	14	True	AATAAA	-15	NA	830400	831986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_830714_831223_831296_831534
transcript_20615.nnic	chr11	+	911	3	NNC	ENSG00000177685.17	novel	1792	9	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	145.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCCTCCTGGGCCTTC	3	True	NA	14	True	AATAAA	-15	NA	830422	831986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_830714_831127_831296_831534
transcript_20619.known	chr11	+	1486	8	FSM	ENSG00000177697.19	ENST00000397421.5	1486	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	124.479979539372	2135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTCGCTGTGCTGGTA	-18	True	NA	27	True	AATAAA	-19	NA	832951	838834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_833027_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_2062.known	chr1	+	762	3	FSM	ENSG00000158825.6	ENST00000461985.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	15.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	-4	True	NA	20	True	TATAAA	-20	NA	20589085	20618903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_20589284_20604927_20605040_20618451
transcript_20624.known	chr11	+	1545	9	FSM	ENSG00000177697.19	ENST00000397420.9	1545	9	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_1	121.901343306791	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	-18	True	NA	24	True	AATAAA	-16	NA	832951	838831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_20625.known	chr11	+	1835	8	FSM	ENSG00000177697.19	ENST00000532045.6	1835	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	127.322826079287	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCGCTGTGCTGGTAA	22	True	NA	28	True	AATAAA	-20	NA	832991	838835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836844_837249_837355_837459_837619_837941_838029_838132
transcript_20626.known	chr11	-	876	2	FSM	ENSG00000177700.6	ENST00000322028.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	3328	junction_1	0	17927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTGTGTTTGCACCAC	-6	True	NA	-2	True	GGGGCT	-42	NA	842529	839720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_840481_842413
transcript_20627.known	chr11	+	1379	9	FSM	ENSG00000214063.12	ENST00000397397.7	1379	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	157.932689380635	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	-2	True	NA	14	True	AATAAA	-14	NA	842851	867111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_20629.known	chr11	+	1430	9	FSM	ENSG00000214063.12	ENST00000397408.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	194.614201691449	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	-14	True	NA	19	True	AATAAA	-19	NA	842940	867116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_843051_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_20634.known	chr11	+	1462	9	FSM	ENSG00000214063.12	ENST00000397404.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.579259983575	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	18	True	NA	19	True	AATAAA	-19	NA	844445	867116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_844588_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_20639.known	chr11	+	1332	8	FSM	ENSG00000214063.12	ENST00000397396.5	1332	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	251.445453978652	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	12	False	NA	19	True	AATAAA	-19	NA	842823	867116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_842916_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_20640.known	chr11	+	1025	8	FSM	ENSG00000214063.12	ENST00000397411.6	1025	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	213.674270508995	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCCCCCTGGGAGGGGT	0	True	NA	NA	False	NA	NA	NA	842811	866817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_842916_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_20658.known	chr11	+	1339	8	FSM	ENSG00000214063.12	ENST00000409531.5	1339	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	230.691772453096	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	1599	False	NA	14	True	AATAAA	-14	NA	848809	867111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_848934_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_20663.known	chr11	+	1426	9	FSM	ENSG00000214063.12	ENST00000397406.5	1426	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	211.261353245216	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	-32	True	NA	19	True	AATAAA	-19	NA	844080	867116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_844187_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_20668.known	chr11	-	1477	14	FSM	ENSG00000177830.18	ENST00000436108.6	1477	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	207.24998483237	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGGGTCTGCTGCAGT	-10	True	NA	-11	True	AATACA	-19	NA	910831	869766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_20674.known	chr11	-	3260	13	FSM	ENSG00000177830.18	ENST00000323578.13	3260	13	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_12	91.9188576348123	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTTTGTGCTGCCAG	11	True	NA	NA	False	NA	NA	NA	910810	867858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_20682.known	chr11	-	1289	12	FSM	ENSG00000177830.18	ENST00000429789.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	160.612361225755	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-14	True	NA	-6	True	AATACA	-24	NA	910835	869761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_20699.known	chr11	-	1431	14	FSM	ENSG00000177830.18	ENST00000528581.5	1431	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	223.365728169543	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGTCTGCTGCAGTCCTC	11	True	NA	-7	True	AATACA	-23	NA	910810	869762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_903703_903779_904705_904860_910774
transcript_20700.known	chr11	+	4656	22	FSM	ENSG00000183020.15	ENST00000332231.9	4656	22	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	45.9960069251802	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCACGCGCTTTCTTTGGG	355	False	NA	11	True	AATAAA	-19	NA	925808	1012245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985431_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
transcript_20701.known	chr11	-	3627	6	FSM	ENSG00000078902.16	ENST00000317204.11	3627	6	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_5	16.7690190530037	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGTTCCCGAGTAT	-8	True	NA	-4	True	AATAAA	-21	NA	1309632	1274370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1295644_1295795_1309465
transcript_20702.known	chr11	-	684	5	FSM	ENSG00000078902.16	ENST00000530541.1	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	145.052576674804	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGACATGTTCCCCAAC	1	True	NA	NA	False	NA	NA	NA	1309623	1277154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1309465
transcript_20707.known	chr11	-	795	5	FSM	ENSG00000182208.15	ENST00000526462.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	43.5567159000768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGGGGGCAGTGGGG	NA	False	NA	NA	False	NA	NA	NA	1501247	1470244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1501076
transcript_20708.nnic	chr11	-	1368	4	NNC	ENSG00000182208.15	novel	1745	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	46.9491450638052	586	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGTGTACGTCTCAGC	5883	False	NA	-10	True	AATAAA	-19	NA	1480887	1469456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_1470489_1471294_1471420_1480392_1480487_1480770
transcript_20709.known	chr11	-	608	2	FSM	ENSG00000182208.15	ENST00000526698.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATACGGTTCGTCTCC	5885	False	NA	NA	False	NA	NA	NA	1480885	1471304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1471420_1480392
transcript_2071.known	chr1	-	1941	11	FSM	ENSG00000244038.11	ENST00000602624.7	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	3345	junction_4	199.049767646184	10385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCACCTGGCCCCGGTCCT	7	True	NA	-6	True	AATAAA	-42	NA	20661369	20651776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20652529_20652620_20652728_20652850_20652972_20653626_20653775_20654222_20654372_20654613_20654708_20655439_20655535_20655675_20655780_20656100_20656188_20660880_20660992_20661196
transcript_20712.known	chr11	-	1512	9	FSM	ENSG00000117984.15	ENST00000636843.1	1512	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	402.350107959474	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGCCTGTCTGTCTC	40	False	NA	NA	False	NA	NA	NA	1763948	1753312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1753671_1753802_1753902_1753993_1754139_1754905_1755029_1757323_1757557_1758968_1759088_1759515_1759634_1761308_1761469_1763791
transcript_20716.known	chr11	+	673	5	FSM	ENSG00000214026.11	ENST00000397298.8	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	1103	junction_1	159.995898384927	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCGGAAGCTCTGCTTCC	-7	True	NA	30	True	AATAAA	-20	NA	1947331	1956600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1956255
transcript_20717.known	chr11	+	919	5	FSM	ENSG00000214026.11	ENST00000381514.7	919	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	591.920813960787	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCAGCTTTTCTTGTTTC	2	True	NA	NA	False	NA	NA	NA	1947340	1962838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1962238
transcript_20718.known	chr11	+	736	3	FSM	ENSG00000214026.11	ENST00000466346.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_2	40.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCCATGTCCTGCATT	805	False	NA	NA	False	NA	NA	NA	1950909	1953322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_1951022_1952126_1952210_1952781
transcript_20719.known	chr11	-	989	5	FSM	ENSG00000130600.20	ENST00000428066.7	1243	5	0	254	0	9	multi-exon	FALSE	canonical	3	8	junction_1	2.59807621135332	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGCGTGAGTGTGA	239	False	NA	NA	False	NA	NA	NA	2001470	1995429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1995795_1995875_1995999_1996078_1996192_1996286_1996422_2001217
transcript_2072.known	chr1	-	4443	3	FSM	ENSG00000117242.7	ENST00000451424.1	4443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACCACTTTCTGAAAGG	9330	False	NA	NA	False	AATAAA	-18	NA	20652193	20642656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20643119_20645584_20645687_20648314
transcript_20721.known	chr11	-	934	4	FSM	ENSG00000167244.21	ENST00000418738.2	934	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTATCCCCACACATAAA	4017	False	NA	NA	False	TTTAAA	-34	NA	2137305	2132715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2133224_2133516_2133666_2135366_2135530_2137191
transcript_20722.known	chr11	+	1482	8	FSM	ENSG00000110651.12	ENST00000263645.10	1482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1293	junction_1	137.734142018423	813	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGTGCAGTCCCTC	-3	True	NA	30	True	AATAAA	-22	NA	2377309	2397397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2377616_2390411_2390527_2394094_2394193_2394971_2395047_2395415_2395521_2395868_2395971_2396627_2396715_2396803
transcript_20724.known	chr11	-	435	1	FSM	ENSG00000236264.5	ENST00000453533.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAGAACCTGTTGTGCA	32	False	NA	NA	False	TATAAA	-28	NA	2335749	2335314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2335300_2335700
transcript_20726.known	chr11	+	992	6	FSM	ENSG00000184281.15	ENST00000380992.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	134.934650849958	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGCCTAGCTGGAA	236	False	NA	NA	False	GGGGCT	-16	NA	2400627	2403701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2400799_2401975_2402148_2402293_2402451_2402610_2402653_2402844_2403150_2403556
transcript_20728.known	chr11	+	863	4	FSM	ENSG00000184281.15	ENST00000435795.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	158.800363839494	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCATGAGTGACAACG	11	True	NA	NA	False	NA	NA	NA	2400762	2402971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2400799_2401838_2402148_2402293_2402451_2402610
transcript_2073.known	chr1	-	3958	15	FSM	ENSG00000117245.13	ENST00000400463.8	3958	15	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	8.06858356939597	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCCTTCTCTGACCCTC	0	True	NA	-20	True	AATAAA	-16	NA	20718007	20664013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20664763_20666213_20666332_20670420_20670489_20671937_20672197_20682652_20682885_20684808_20685021_20686045_20686127_20687387_20687945_20690187_20690336_20698378_20698489_20704446_20704900_20709638_20709829_20713453_20713556_20715492_20715640_20717475
transcript_20730.known	chr11	+	851	4	FSM	ENSG00000184281.15	ENST00000440813.1	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	150.142894899788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCATGGAGGCCTGC	1348	False	NA	NA	False	NA	NA	NA	2402099	2403448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2402148_2402293_2402451_2402610_2402653_2402844
transcript_20731.nic	chr11	+	2825	3	ISM	ENSG00000184281.15	ENST00000440813.1	851	4	-1354	-428	-4	0	intron_retention	FALSE	canonical	3	40	junction_1	159	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	-6	True	NA	19	True	AATAAA	-19	NA	2400745	2403876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_2402148_2402293_2402451_2402610
transcript_20732.known	chr11	+	1544	4	FSM	ENSG00000184281.15	ENST00000380996.9	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	130.742325034992	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTATCTGGGCCC	96	False	NA	21	True	AATAAA	-21	NA	2400487	2403878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2400799_2402293_2402451_2402610_2402653_2402844
transcript_20733.known	chr11	+	1472	3	FSM	ENSG00000184281.15	ENST00000333256.11	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	67.5	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	-2	True	NA	19	True	AATAAA	-19	NA	2400749	2403876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2400799_2402293_2402451_2402610
transcript_20734.known	chr11	+	1423	2	FSM	ENSG00000184281.15	ENST00000451491.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	18	False	NA	18	True	AATAAA	-18	NA	2402292	2403875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2402451_2402610
transcript_20735.known	chr11	-	775	4	FSM	ENSG00000129757.15	ENST00000647251.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	81.6129074758807	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGGAA	46	False	NA	-64	True	TATAAA	-39	NA	2885728	2883631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2883911_2883998_2884135_2885201_2885467_2885633
transcript_20737.known	chr11	-	1930	3	FSM	ENSG00000129757.15	ENST00000430149.3	1930	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	35	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTTTGTGCTTG	9	True	NA	-4	True	AATAAA	-21	NA	2885765	2883217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2883916_2883998_2884135_2884669
transcript_20739.known	chr11	-	578	3	FSM	ENSG00000129757.15	ENST00000681969.1	578	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	108.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAATAAAAAAACCAT	-1	True	NA	-48	True	AAAAAG	-18	NA	2885775	2883615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2883916_2883998_2884135_2885633
transcript_20740.known	chr11	+	1543	11	FSM	ENSG00000110628.16	ENST00000649076.2	1543	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	18.2032964047724	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCGGCCTGGTTTCT	-27	True	NA	13	True	AATAAA	-21	NA	2902277	2925246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_20742.known	chr11	+	1225	9	FSM	ENSG00000110628.16	ENST00000449793.6	1225	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	37.7491721763537	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	-22	True	NA	-6	True	AATAAA	-2	NA	2902282	2925227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_20743.nnic	chr11	+	1159	8	NIC	ENSG00000110628.16	novel	1225	9	NA	NA	-14	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_2	40.0209129004794	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACCTCTTCCGGCCTG	0	True	NA	7	True	AATAAA	-15	NA	2902263	2925240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_2902365_2903213_2903490_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_20745.nic	chr11	+	618	4	ISM	ENSG00000110628.16	ENST00000449603.5	682	6	2296	-57	2296	0	3prime_fragment	FALSE	canonical	3	108	junction_1	12.8149218578274	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACCTCTTCCGGCCTG	4455	False	NA	7	True	AATAAA	-15	NA	2919243	2925240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_2919408_2922101_2922204_2922435_2922557_2925009
transcript_20748.known	chr11	-	697	3	FSM	ENSG00000254827.6	ENST00000455942.3	697	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGATGTTTGCTTGCTTC	304	False	NA	NA	False	AATAGA	-19	NA	2903490	2888096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2888636_2902583_2902710_2903458
transcript_20749.nnic	chr11	-	698	2	NNC	ENSG00000254827.6	novel	697	3	NA	NA	-3565	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGATGTTTGCTTGCTTC	6603	False	NA	NA	False	AATAGA	-19	NA	2892995	2888096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_2888636_2892836
transcript_20753.known	chr11	-	1941	16	FSM	ENSG00000205531.13	ENST00000526115.5	1941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	530.763081693602	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTGTGTAGAGTAGGG	5	True	NA	NA	False	NA	NA	NA	2992377	2945111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2989128_2989272_2992253
transcript_20757.known	chr11	-	2463	16	FSM	ENSG00000205531.13	ENST00000380542.9	2463	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	479.423987718596	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCACTGTGCCATGTGG	-25	True	NA	-8	True	ATTAAA	-16	NA	2992329	2944436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_2076.known	chr1	-	3884	13	FSM	ENSG00000127483.19	ENST00000312239.10	3884	13	0	0	0	0	multi-exon	FALSE	canonical	1	42	junction_12	159.730415248805	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	0	True	NA	-21	True	AATAAA	-19	NA	20786652	20742678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786648
transcript_20761.known	chr11	-	2479	15	FSM	ENSG00000205531.13	ENST00000620138.4	2479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	379.518444874554	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	5	True	NA	-2	True	ATTAAA	-22	NA	2992377	2944430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_20769.nic	chr11	-	1892	12	ISM	ENSG00000205531.13	ENST00000620138.4	2479	15	-68	9448	-68	425	5prime_fragment	FALSE	canonical	0	0	junction_2	419.143025747844	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAGTATGTTCTAGATG	NA	False	NA	-4	True	AATAAA	-22	NA	2992445	2953878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_2078.nnic	chr1	-	1761	12	NIC	ENSG00000127483.19	novel	3884	13	NA	NA	-19	953	combination_of_known_splicesites	FALSE	canonical	1	20	junction_11	155.262986707465	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTTAGGTGCTTTTATT	-33	True	NA	-26	True	AATAAA	-18	NA	20786685	20744638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20786648
transcript_20787.known	chr11	-	2737	23	FSM	ENSG00000110619.18	ENST00000380525.9	2737	23	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_21	157.761248633015	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-14	True	NA	-9	True	AATAAA	-17	NA	3057423	3000928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
transcript_20789.known	chr11	-	2805	23	FSM	ENSG00000110619.18	ENST00000531387.5	2805	23	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_20	187.845840830601	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTCTGCATGTT	190	False	NA	-2	True	AATAAA	-24	NA	3057437	3000921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3047752_3048002_3057342
transcript_20794.known	chr11	-	2491	22	FSM	ENSG00000110619.18	ENST00000278224.13	2491	22	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	99.63709660768	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-9	True	NA	-9	True	AATAAA	-17	NA	3057418	3000928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_20795.known	chr11	-	1151	4	FSM	ENSG00000110619.18	ENST00000484484.5	1151	4	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	81.5693297481079	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-1	True	NA	-9	True	AATAAA	-17	NA	3007010	3000928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3001249_3001969_3002601_3005365_3005434_3006878
transcript_20796.known	chr11	-	5732	19	FSM	ENSG00000110619.18	ENST00000526890.5	5732	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	186.491923831358	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCCTCTCTGTCTTGTTC	-6	True	NA	-10	True	AATAAA	-16	NA	3057380	3000929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3018541_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3057342
transcript_20797.nnic	chr11	+	739	3	NNC	ENSG00000234791.1	novel	293	2	NA	NA	-144	1044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAGACTTTAAAGCCGT	NA	False	NA	NA	False	AATAAA	-17	NA	3189401	3190973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3189619_3189709_3189868_3190609
transcript_20798.known	chr11	+	293	2	FSM	ENSG00000234791.1	ENST00000455154.1	293	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGGCTGTGAGCTC	78	False	NA	NA	False	AATACA	-14	NA	3189545	3189929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3189619_3189709
transcript_20801.known	chr11	-	3342	7	FSM	ENSG00000005801.18	ENST00000620374.4	3342	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	154.276807503051	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGTCTCTTCATCCT	-5	True	NA	-3	True	AATAAA	-14	NA	3379222	3357927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_20809.known	chr11	-	2008	6	FSM	ENSG00000005801.18	ENST00000526601.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	149.541164901174	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAATATAA	5	True	NA	-34	True	NA	NA	NA	3379146	3359116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_2081.nic	chr1	-	529	5	ISM	ENSG00000127483.19	ENST00000312239.10	3884	13	-51	30908	-37	0	5prime_fragment	FALSE	canonical	3	42	junction_4	156.500798720007	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAGAAGAAAGTGAAAAAAA	604	False	NA	NA	False	AAGAAA	-2	NA	20786703	20773586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786648
transcript_20811.known	chr11	-	2389	6	FSM	ENSG00000005801.18	ENST00000429541.6	2389	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	176.777374117843	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATTATACTAGATGGAA	-1	True	NA	59	True	AATATA	-43	NA	3379218	3358944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373657_3377616_3377901_3379037
transcript_20812.known	chr11	-	3187	6	FSM	ENSG00000005801.18	ENST00000399602.9	3187	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	187.67056242256	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	5	True	NA	-2	True	AATAAA	-15	NA	3379146	3357926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_20813.known	chr11	-	1018	6	FSM	ENSG00000005801.18	ENST00000438262.6	1018	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	162.974353810653	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTCCCACCTTACTGA	25	True	NA	NA	False	NA	NA	NA	3379126	3359996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3362545_3362603_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_2082.known	chr1	-	970	8	FSM	ENSG00000127483.19	ENST00000424732.5	970	8	0	0	0	0	multi-exon	FALSE	canonical	1	172	junction_4	140.174235601735	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGGCAAAGGTGCTTC	-5	True	NA	NA	False	NA	NA	NA	20787312	20757198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20787194
transcript_20820.known	chr11	-	1001	6	FSM	ENSG00000005801.18	ENST00000528410.5	1001	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	162.822602853535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAACATTACAGATGTGA	12	True	NA	NA	False	ATTAAA	-40	NA	3379139	3360038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3360719_3360789_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_20825.known	chr11	-	2021	5	FSM	ENSG00000005801.18	ENST00000005082.13	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	172.672196661767	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGTCTCCAGAGCA	35	True	NA	10	True	AATAAA	-40	NA	3379116	3358993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_20827.known	chr11	-	579	5	FSM	ENSG00000005801.18	ENST00000529678.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	183.572192883345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATAATGGACTTAACCA	12	True	NA	-95	True	NA	NA	NA	3379139	3360410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3373576_3373676_3379037
transcript_2083.nic	chr1	-	502	4	ISM	ENSG00000127483.19	ENST00000312239.10	3884	13	-51	33921	-37	98	5prime_fragment	FALSE	canonical	3	42	junction_3	171.815792832518	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTAAGGAGTTATGTCTT	604	False	NA	-3	True	AAGAAA	-26	NA	20786703	20776599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_20776751_20779811_20779912_20780344_20780541_20786648
transcript_20837.known	chr11	-	560	5	FSM	ENSG00000005801.18	ENST00000427810.6	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	204.838198342008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCCTTGATAATTTAT	0	True	NA	NA	False	AAAAAG	-22	NA	3379100	3360477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3377616_3377803_3379037
transcript_2084.known	chr1	-	473	4	FSM	ENSG00000127483.19	ENST00000437575.5	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	190.60838270012	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCACCTGCTACTTC	-16	True	NA	-38	True	NA	NA	NA	20787323	20776697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20776751_20779811_20779912_20780349_20780541_20787194
transcript_20844.known	chr11	-	2970	4	FSM	ENSG00000005801.18	ENST00000354599.10	2970	4	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	52.1621403787161	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	6	True	NA	-2	True	AATAAA	-15	NA	3379145	3357926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3379037
transcript_20851.known	chr11	-	764	6	FSM	ENSG00000005801.18	ENST00000533036.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.403657227337	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATCTTTGATAACTTT	-1	True	NA	-28	True	AATAAA	-5	NA	3379152	3360343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3361742_3361890_3361975_3362033_3370974_3371071_3371576_3371704_3379037
transcript_20865.nnic	chr11	+	1749	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	27.8388218141501	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	NA	False	NA	24	True	AATGAA	-18	NA	3380882	3408978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
transcript_2087.known	chr1	-	6406	13	FSM	ENSG00000127483.19	ENST00000438032.6	6406	13	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_12	155.946750170976	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGCCTAGAGTAT	0	True	NA	NA	False	ATTAAA	-22	NA	20787307	20740265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20787194
transcript_20904.nnic	chr11	+	991	6	NNC	ENSG00000223756.8	novel	2337	9	NA	NA	-35	-8	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	28.6607745882766	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGACAGCGGTG	NA	False	NA	NA	False	AATAAA	-10	NA	3380882	3398082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3397816
transcript_2091.known	chr1	-	5762	35	FSM	ENSG00000075151.24	ENST00000400422.6	5762	35	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_19	60.2324505303064	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGAACTTTTAATTTAT	32	True	NA	67	True	TTTAAA	-44	NA	21176847	20807003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20807501_20810737_20810885_20813157_20813240_20817391_20817539_20825099_20825199_20827616_20827699_20829146_20829273_20840855_20841029_20849414_20849531_20851257_20851479_20853559_20853678_20854977_20855072_20857402_20857498_20860384_20860518_20862227_20862333_20864475_20864713_20865115_20865263_20879322_20879521_20886200_20886372_20892618_20892730_20893516_20893637_20895367_20895502_20899696_20899944_20904882_20904972_20941490_20942331_20950002_20950109_20969473_20969597_20973001_20973100_20980333_20980449_20981047_20981228_21002712_21002809_21050865_21050995_21089137_21089214_21176174_21176359_21176721
transcript_20913.nnic	chr11	+	968	5	NNC	ENSG00000223756.8	novel	674	6	NA	NA	-1	-5943	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.3757239301301	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAACAAATCTAGGAAGCC	-1	True	NA	NA	False	NA	NA	NA	3380959	3391296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3390686
transcript_20914.nnic	chr11	+	950	5	NNC	ENSG00000223756.8	novel	674	6	NA	NA	-35	-5946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.3757239301301	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAACAAATCTAGGAA	NA	False	NA	NA	False	NA	NA	NA	3380882	3391293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3390778
transcript_20915.nnic	chr11	+	552	5	NNC	ENSG00000223756.8	novel	674	6	NA	NA	0	2830	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	32.3757239301301	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAGAAGTCTCTATAAT	0	True	NA	21	True	AATAAA	-17	NA	3380960	3411811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3411616
transcript_20917.nic	chr11	+	2841	4	NIC	ENSG00000223756.8	novel	2337	9	NA	NA	0	3041	combination_of_known_junctions	FALSE	canonical	3	47	junction_1	15.1730755689881	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGGGGCAAGAGGGGCTG	0	True	NA	NA	False	AAAAAG	-4	NA	3380960	3387452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898
transcript_20918.known	chr11	+	382	3	FSM	ENSG00000223756.8	ENST00000530366.5	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	17	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACACTGGTGACATGTTA	32	False	NA	NA	False	NA	NA	NA	3380992	3384411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3381045_3383461_3383547_3384166
transcript_20919.known	chr11	+	2337	9	FSM	ENSG00000223756.8	ENST00000529482.5	2337	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	48.8441398736839	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	0	True	NA	24	True	AATGAA	-18	NA	3380960	3408978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3381045_3383461_3383547_3384166_3384285_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3406498_3407698_3408685
transcript_2092.known	chr1	-	5099	19	FSM	ENSG00000117298.16	ENST00000415912.6	5099	19	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_18	19.9605320446669	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGGGTGTCTGTC	-9	True	NA	-1	True	AATAAA	-18	NA	21345504	21217246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21345375
transcript_20920.nnic	chr11	+	1195	2	Antisense	novelGene_ENSG00000166492.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAGAAGTCTCTATAAT	NA	False	NA	21	True	AATAAA	-17	NA	3409832	3411811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_3410849_3411632
transcript_20934.known	chr11	+	1173	3	FSM	ENSG00000287312.1	ENST00000656923.1	1173	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTGTTTTCAATCTAAT	NA	False	NA	63	True	ACTAAA	-26	NA	3511558	3520886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3512281_3515425_3515598_3520607
transcript_20939.nnic	chr11	-	607	3	NNC	ENSG00000255367.3	novel	578	3	NA	NA	55743	-143	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	1	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTATTGCTCATGACCC	NA	False	NA	-16	True	TTTAAA	-10	NA	3516244	3508122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_3508397_3515090_3515199_3516019
transcript_2094.known	chr1	+	2536	12	FSM	ENSG00000162551.14	ENST00000374840.8	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_9	61.941054357155	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGAGTCTTTGTGGT	-2	True	NA	35	True	AATAAA	-23	NA	21509422	21578410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_21509518_21553977_21554143_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_20940.nnic	chr11	-	700	3	Fusion	ENSG00000255367.3_ENSG00000284639.1	novel	578	3	NA	NA	-33	-143	multi-exon	FALSE	canonical	0	0	junction_2	2	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTATTGCTCATGACCC	NA	False	NA	-16	True	TTTAAA	-10	NA	3581244	3508122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_3508397_3515090_3515199_3580926
transcript_20943.nnic	chr11	-	878	3	NNC	ENSG00000255367.3	novel	983	5	NA	NA	-33	-1403	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCATTTTCTCTAACT	NA	False	NA	2	True	AATAAA	-23	NA	3581244	3509382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_3509835_3515090_3515199_3580926
transcript_20945.known	chr11	-	1217	2	FSM	ENSG00000287906.1	ENST00000659225.1	1217	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTCCAATTAGCAG	-7	True	NA	NA	False	AAAAAG	-9	NA	3477065	3475279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3476374_3476942
transcript_20946.nic	chr11	-	586	2	ISM	ENSG00000255367.3	ENST00000527970.1	983	5	-36	26612	-36	-152	5prime_fragment	FALSE	canonical	2	17	junction_1	0	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCACAAGCCATTATTGC	NA	False	NA	-25	True	TTTAAA	-1	NA	3581247	3508131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_3508397_3580926
transcript_20947.nnic	chr11	-	1011	2	NNC	ENSG00000255367.3	novel	578	3	NA	NA	55744	-6432	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAACACTTCCTCCCAG	NA	False	NA	NA	False	ATTAAA	-24	NA	3516243	3514411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_3515199_3516019
transcript_20948.nnic	chr11	-	1105	2	Fusion	ENSG00000255367.3_ENSG00000284639.1	novel	578	3	NA	NA	-33	-6432	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAACACTTCCTCCCAG	NA	False	NA	NA	False	ATTAAA	-24	NA	3581244	3514411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_3515199_3580926
transcript_20952.known	chr11	-	1241	5	FSM	ENSG00000167311.14	ENST00000359918.8	1241	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	20.9821352583573	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACATGGAATTTTATGAT	63	False	NA	-15	True	ATTAAA	-16	NA	3642316	3638513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805_3641865_3642177
transcript_20955.nnic	chr11	-	760	4	NNC	ENSG00000167311.14	novel	1232	4	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	21.9139732185248	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	262	False	NA	-13	True	ATTAAA	-18	NA	3642117	3638511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_3638794_3639002_3639036_3639641_3639775_3641805
transcript_20956.nnic	chr11	-	1005	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	-25	0	intron_retention	FALSE	canonical	2	7	junction_3	20.0720922897661	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	38	False	NA	-13	True	ATTAAA	-18	NA	3642341	3638511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_3638794_3639002_3639036_3639641_3639796_3641805
transcript_20957.nnic	chr11	-	910	4	NIC	ENSG00000167311.14	novel	1232	4	NA	NA	-128	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	21.9241115365405	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	259	False	NA	-13	True	ATTAAA	-18	NA	3642120	3638511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_3638920_3639002_3639036_3639641_3639796_3641805
transcript_20960.known	chr11	-	1232	4	FSM	ENSG00000167311.14	ENST00000397068.8	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	5.18544972870135	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805
transcript_20961.known	chr11	-	1154	4	FSM	ENSG00000167311.14	ENST00000397067.7	1154	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	22.4251842554055	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3638920_3639002_3639036_3639845_3640372_3641805
transcript_20963.known	chr11	-	3923	20	FSM	ENSG00000110713.17	ENST00000397004.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_10	38.2375574968394	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGATGGCCTTATTTT	3	True	NA	NA	False	TATAAA	-22	NA	3797541	3711552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3712729_3713817_3713996_3719411_3719551_3720711_3720826_3723156_3723456_3725102_3725220_3731390_3731579_3735190_3735325_3744508_3744650_3753315_3753409_3760538_3760627_3762901_3763040_3768580_3768745_3771747_3771929_3773631_3773740_3775881_3776022_3778872_3779050_3779155_3779258_3782041_3782146_3797399
transcript_2097.known	chr1	+	2131	11	FSM	ENSG00000162551.14	ENST00000540617.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	280.595723417161	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGTCCCAGGAAGC	3	True	NA	NA	False	NA	NA	NA	21509427	21578175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_20972.known	chr11	+	1963	7	FSM	ENSG00000148985.20	ENST00000278243.9	1963	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	99.984582144782	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGGGCTCATCTTGTT	-8	True	NA	37	True	AATAAA	-37	NA	3808559	3826371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808652_3811249_3811425_3817352_3817536_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_20973.nic	chr11	+	1860	7	NIC	ENSG00000148985.20	novel	1963	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	97.2585329018602	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-22	True	NA	18	True	AATAAA	-18	NA	3808545	3826352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3811249_3811425_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_20981.known	chr11	+	798	6	FSM	ENSG00000148985.20	ENST00000469307.4	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	80.616127418774	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAAAGCGATTCTGAAC	31	True	NA	NA	False	NA	NA	NA	3808598	3825440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_20982.nic	chr11	+	1854	6	NIC	ENSG00000148985.20	novel	931	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	94.527456328836	2108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-22	True	NA	18	True	AATAAA	-18	NA	3808545	3826352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824456_3825019_3825129_3825327
transcript_20985.nnic	chr11	+	1684	6	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	108.370475684109	2118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-21	True	NA	18	True	AATAAA	-18	NA	3808546	3826352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3822908_3822994_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_20986.known	chr11	+	894	6	FSM	ENSG00000148985.20	ENST00000479072.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	110.293426821366	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGGGTGTAGGCCAA	26	True	NA	NA	False	NA	NA	NA	3808593	3825578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_20999.known	chr11	+	1530	5	FSM	ENSG00000148985.20	ENST00000496834.6	1530	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	74.2710407897991	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	26	True	NA	-4	True	NA	NA	NA	3808593	3826330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808652_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21.known	ERCC-00051	+	258	1	FSM	ERCC-00051A	DQ516740	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00051_+_0_300
transcript_210.known	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1268	junction_3	641.557626016557	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
transcript_21001.nic	chr11	+	1679	5	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	107.225230239902	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-22	True	NA	18	True	AATAAA	-18	NA	3808545	3826352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3823882_3824136_3824269_3824456_3825019_3825129_3825327
transcript_21010.nnic	chr11	+	1342	4	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	109.045352440573	2128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	-17	True	NA	18	True	AATAAA	-18	NA	3808550	3826352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3824269_3824377_3825019_3825129_3825327
transcript_21015.known	chr11	+	1696	7	FSM	ENSG00000148985.20	ENST00000532523.5	1696	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.062734636005	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	-5	True	NA	0	True	NA	NA	NA	3797912	3826334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21017.known	chr11	-	1295	2	FSM	ENSG00000177105.10	ENST00000351018.5	1295	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	2437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGCTCCTCCCTGTGT	-3	True	NA	-8	True	AATAAA	-18	NA	3840959	3826977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3828207_3840893
transcript_21020.known	chr11	+	3142	19	FSM	ENSG00000167325.15	ENST00000300738.10	3142	19	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_15	82.4090407661684	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTTCTTTGAGAA	2	True	NA	15	True	TATAAA	-19	NA	4094798	4138932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
transcript_21021.known	chr11	+	2863	18	FSM	ENSG00000167325.15	ENST00000533349.5	2863	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	218.235309973045	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATGAGATTAATTTTG	-7	True	NA	19	True	AATAAA	-19	NA	4094842	4138875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4095032_4101992_4102082_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
transcript_21022.nnic	chr11	+	739	3	NNC	ENSG00000254480.2	novel	653	3	NA	NA	-3916	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCTTTGTCTTATTA	NA	False	NA	NA	False	ATTAAA	-28	NA	4175758	4202663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_4176013_4180631_4180712_4202258
transcript_21023.nnic	chr11	+	596	3	NNC	ENSG00000254480.2	novel	653	3	NA	NA	-3858	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCTTTGTCTTATTA	NA	False	NA	NA	False	ATTAAA	-28	NA	4175816	4202663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_4175928_4180631_4180712_4202258
transcript_21025.known	chr11	+	462	2	FSM	ENSG00000254480.2	ENST00000525365.1	462	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCAACTTGATCTTTG	7465	False	NA	NA	False	ATTAAA	-20	NA	4187139	4202655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4187205_4202258
transcript_21026.known	chr11	-	1935	7	FSM	ENSG00000132109.10	ENST00000254436.8	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	6.94422221866655	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTCTATCCCATTCAG	-16	True	NA	-18	True	AATAAA	-23	NA	4393702	4384896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_4385854_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
transcript_21027.nnic	chr11	+	896	2	FSM	ENSG00000225101.7	ENST00000687315.1	902	2	3	3	3	-3	multi-exon	FALSE	canonical	2	4	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTCTGACCATGAATTG	NA	False	NA	NA	False	AATAAA	-24	NA	4393777	4410906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4394166_4410398
transcript_21028.known	chr11	-	3187	7	FSM	ENSG00000167333.13	ENST00000531101.5	3187	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.2592053367191	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGGAATATTAAAAATTG	-6	True	NA	-110	True	NA	NA	NA	4608204	4598779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602407_4603240_4603341_4605078_4605562_4608026
transcript_21031.nnic	chr11	-	2412	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11108	-3942	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	61.5	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCGTGACATAATAGTAA	NA	False	NA	NA	False	ATTAAA	-15	NA	5165865	5150765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_21032.nnic	chr11	-	2246	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11108	-4108	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	61.5	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTTCAGAGTCATACA	NA	False	NA	NA	False	AATAAA	-16	NA	5165865	5150931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_21034.nnic	chr11	-	1764	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11108	-4590	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	61.5	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTACATGCTTTTTTCTTT	NA	False	NA	-5	True	CATAAA	-17	NA	5165865	5151413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_21035.known	chr11	-	620	3	FSM	ENSG00000223609.11	ENST00000650601.1	620	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGATTAATTTCACTT	-3	True	NA	NA	False	AATAAA	-16	NA	5234483	5232837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5233093_5233990_5234214_5234341
transcript_21036.known	chr11	-	586	3	FSM	ENSG00000196565.15	ENST00000336906.6	586	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTCTTCAGTTCTTTT	-1	True	NA	NA	False	AATAAA	-25	NA	5254781	5253187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5253406_5254291_5254515_5254636
transcript_21037.nnic	chr11	-	662	3	NNC	ENSG00000196565.15	novel	694	3	NA	NA	80954	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTGTCTTCAGTTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	5424651	5253189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5253406_5254291_5254515_5424428
transcript_2104.known	chr1	+	703	5	FSM	ENSG00000162551.14	ENST00000468526.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	395.073648197396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACGTGAGTGCTCGGGGG	418	False	NA	NA	False	NA	NA	NA	21509396	21564211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040
transcript_21040.known	chr11	-	587	3	FSM	ENSG00000213934.9	ENST00000330597.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTTCAGCTCTTTT	4923	False	NA	NA	False	AATAAA	-25	NA	5249857	5248268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5248488_5249367_5249591_5249712
transcript_21042.nnic	chr11	-	1240	4	NNC	ENSG00000213931.7	novel	918	4	NA	NA	80816	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.18993502999218	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATTTTATCTTCTCCA	NA	False	NA	-4	True	AATAAA	-26	NA	5424788	5268344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5268598_5269453_5269677_5269798_5270157_5424382
transcript_21043.nnic	chr11	-	1301	4	NNC	ENSG00000213931.7	novel	918	4	NA	NA	80709	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.18993502999218	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATTTTATCTTCTCCA	NA	False	NA	-4	True	AATAAA	-26	NA	5424895	5268344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5268598_5269453_5269677_5269798_5270157_5424428
transcript_21044.nnic	chr11	-	1011	4	NNC	ENSG00000213931.7	novel	918	4	NA	NA	68612	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.18993502999218	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATTTTATCTTCTCCA	4549	False	NA	-4	True	AATAAA	-26	NA	5436992	5268344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5268598_5269453_5269677_5269798_5270157_5436815
transcript_21047.known	chr11	+	2590	9	FSM	ENSG00000121236.21	ENST00000380107.5	2590	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.8795801798766	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTCTTTCAAATTAATTG	16	False	NA	NA	False	AATAAA	-7	NA	5596128	5612423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5596182_5603245_5603562_5603639_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_21050.known	chr11	+	3217	8	FSM	ENSG00000121236.21	ENST00000278302.9	3217	8	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_3	35.6891340006211	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-4	True	NA	7	True	AATAAA	-18	NA	5596108	5612952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5596182_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_21055.known	chr11	+	3422	8	FSM	ENSG00000121236.21	ENST00000380097.8	3422	8	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	49.9052162829187	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	-30	True	NA	7	True	AATAAA	-18	NA	5596636	5612952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5596915_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_21056.known	chr11	+	2293	8	FSM	ENSG00000258659.7	ENST00000429814.3	2293	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.01695886884898	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCTGTAGTAATGTC	-8	True	NA	15	True	AATAAA	-26	NA	5625000	5644398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5625061_5632254_5632755_5633803_5633900_5634630_5634862_5641166_5641190_5642405_5642507_5642816_5642844_5643143
transcript_2106.known	chr1	-	3322	25	FSM	ENSG00000076864.21	ENST00000374765.9	3322	25	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_24	16.7876856322987	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGAGTTGGGCCTGGCTT	-14	True	NA	-5	True	AATAAA	-21	NA	21669357	21596220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21597265_21597685_21597729_21597960_21598065_21598399_21598503_21599493_21599618_21601683_21601798_21602803_21602914_21606065_21606198_21608212_21608351_21608849_21608937_21609574_21609647_21610119_21610276_21611451_21611582_21611715_21611817_21612025_21612110_21613175_21613230_21613627_21613707_21613985_21614090_21617305_21617492_21617933_21617973_21619024_21619073_21620014_21620051_21626303_21626398_21649760_21649797_21669253
transcript_21064.known	chr11	+	2951	8	FSM	ENSG00000121236.21	ENST00000445329.5	2951	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	54.5407542810972	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	17	False	NA	7	True	AATAAA	-18	NA	5596745	5612952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5596915_5603607_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_2107.known	chr1	-	4419	27	FSM	ENSG00000090686.16	ENST00000308271.14	4419	27	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_14	34.0286165684432	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTTTCTCT	8	True	NA	NA	False	NA	NA	NA	21783149	21678297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_21070.known	chr11	-	2290	11	FSM	ENSG00000132256.20	ENST00000380027.5	2290	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.0795674882716	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATCTAAGTGTCTTGA	NA	False	NA	-9	True	AATAAA	-17	NA	5872358	5663562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5664174_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015_5685395_5855751_5855855_5861164_5861362_5872314
transcript_21071.known	chr11	-	2862	8	FSM	ENSG00000132256.20	ENST00000684655.1	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	18.3213937621502	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAAAGCATCTATCTAA	-36	True	NA	-18	True	AATAAA	-8	NA	5685097	5663571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_21076.known	chr11	-	3170	7	FSM	ENSG00000132256.20	ENST00000396847.7	3170	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	12.5521135891752	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTAATACTTTGGA	19	True	NA	-19	True	AATAAA	-9	NA	5685042	5663616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_21079.nic	chr11	-	950	4	ISM	ENSG00000132256.20	ENST00000682968.1	2669	7	-9	14486	-9	168	5prime_fragment	FALSE	canonical	3	43	junction_3	24.0970260959038	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTTCTCTGCGTTGCTG	-47	True	NA	NA	False	ATTAAA	-16	NA	5685108	5678151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_5678435_5679073_5679170_5679760_5680239_5685015
transcript_21080.known	chr11	-	3364	8	FSM	ENSG00000132256.20	ENST00000380034.8	3364	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	11.7351730159502	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGGGGTAATCCATTA	-13	True	NA	33	True	TTTAAA	-41	NA	5685074	5663194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_21081.known	chr11	+	2888	8	FSM	ENSG00000132274.16	ENST00000379965.8	2888	8	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_3	25.9968600929781	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	-38	True	NA	13	True	AATAAA	-17	NA	5689789	5710863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
transcript_21082.known	chr11	+	460	4	FSM	ENSG00000132274.16	ENST00000493494.1	460	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	14.9740516301441	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGTGTAAATTATTCAA	5944	False	NA	29	True	AATAAA	-27	NA	5706549	5709317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5706617_5708172_5708274_5708576_5708604_5709052
transcript_21083.known	chr11	+	1333	2	FSM	ENSG00000180988.3	ENST00000317037.3	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAATATGTCAATTTTC	NA	False	NA	NA	False	AATAAA	-44	NA	5808923	5821483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5809055_5820281
transcript_21088.known	chr11	-	3481	12	FSM	ENSG00000051009.11	ENST00000265978.8	3481	12	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_4	54.6482364954819	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	NA	False	NA	-13	True	TATAAA	-14	NA	6234711	6211344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6211868_6214410_6214574_6214732_6214912_6217370_6218151_6218557_6218764_6218970_6219051_6222441_6222610_6222810_6222898_6223079_6223239_6223609_6224249_6224378_6224708_6234543
transcript_21089.known	chr11	-	1309	3	FSM	ENSG00000051009.11	ENST00000529360.1	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	NA	False	NA	-13	True	TATAAA	-14	NA	6215355	6211344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6211868_6214410_6214574_6214732
transcript_21099.known	chr11	+	1734	4	FSM	ENSG00000110148.10	ENST00000532715.5	1734	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	933.80333404131	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCTCTCCTTCCTTA	90	False	NA	-46	True	NA	NA	NA	6259805	6272062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6260080_6270087_6270338_6270645_6270804_6271010
transcript_2110.known	chr1	-	2818	11	FSM	ENSG00000090686.16	ENST00000421625.6	2818	11	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_9	27	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTACTTGTGGTTTGTCTT	NA	False	NA	-4	True	AATAAA	-14	NA	21783606	21727850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_21102.known	chr11	+	2019	5	FSM	ENSG00000110148.10	ENST00000334619.7	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	1855	junction_4	114.326287440816	2596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	-14	True	NA	19	True	AATAAA	-21	NA	6259837	6272127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645_6270804_6271010
transcript_21103.known	chr11	+	247	2	FSM	ENSG00000110148.10	ENST00000532396.1	247	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGCTTTTTTTTCTGTGT	NA	False	NA	NA	False	NA	NA	NA	6270775	6271214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6270819_6271010
transcript_21104.known	chr11	-	1025	2	FSM	ENSG00000170955.10	ENST00000532354.1	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	10	True	NA	-31	True	AATAAA	-17	NA	6320062	6318945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6319565_6319656
transcript_21105.known	chr11	+	1274	4	FSM	ENSG00000282556.4	ENST00000668307.2	1364	4	0	90	0	-90	multi-exon	FALSE	canonical	0	0	junction_1	5.09901951359278	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGAACATCTCAATTT	3	True	NA	NA	False	NA	NA	NA	6319139	6330706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6319698_6323584_6323693_6323893_6324036_6330240
transcript_21106.known	chr11	+	2410	6	FSM	ENSG00000166311.10	ENST00000342245.9	2410	6	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_5	1.95959179422654	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCTGTGTGACTGTCCC	7	True	NA	8	True	AATAAA	-21	NA	6390473	6394996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6390917_6391383_6392157_6393215_6393388_6393616_6393694_6393895_6394042_6394197
transcript_21108.known	chr11	-	1920	14	FSM	ENSG00000166313.20	ENST00000608655.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	156.112082327156	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	8970	False	NA	-37	True	AATAAA	-16	NA	6404843	6395124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6404744
transcript_21109.known	chr11	-	2095	14	FSM	ENSG00000166313.20	ENST00000608704.5	2095	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	157.066450340247	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	8153	False	NA	-37	True	AATAAA	-16	NA	6405660	6395124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6401976_6401983_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6405386
transcript_21110.known	chr11	-	2636	14	FSM	ENSG00000166313.20	ENST00000299402.10	2636	14	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_4	19.9362890554329	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	14	True	NA	-37	True	AATAAA	-16	NA	6419070	6395124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_21111.known	chr11	-	1626	13	FSM	ENSG00000166313.20	ENST00000530885.5	1626	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	100.885523683474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGTCTAGAGGCTATTC	8915	False	NA	NA	False	ACTAAA	-15	NA	6404898	6395467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6404744
transcript_21112.nic	chr11	-	1919	13	NIC	ENSG00000166313.20	novel	2666	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_12	98.9877587830379	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-4	True	NA	-37	True	AATAAA	-16	NA	6419088	6395124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6418984
transcript_21114.known	chr11	-	2684	14	NNC	ENSG00000166313.20	novel	2666	15	NA	NA	-17	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	101.583731167298	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTTCTTATGCCTGT	-27	True	NA	-36	True	AATAAA	-17	NA	6419111	6395123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401695_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_21115.known	chr11	-	1575	10	FSM	ENSG00000110169.12	ENST00000265983.8	1575	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	3.62092683040007	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGGACCTTGGTCGTGA	2	True	NA	-7	True	AATAAA	-24	NA	6440987	6431048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6431471_6431640_6431804_6431886_6432018_6437045_6437178_6437439_6437653_6438355_6438510_6440164_6440287_6440466_6440539_6440671_6440731_6440880
transcript_2112.known	chr1	+	2256	7	FSM	ENSG00000070831.17	ENST00000344548.7	2256	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	252.383086244348	6610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTGAGGGTTGTTAT	-7	True	NA	16	True	ATTAAA	-21	NA	22052667	22092946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22052743_22074093_22074220_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
transcript_21120.known	chr11	-	2838	12	FSM	ENSG00000110171.21	ENST00000345851.8	2838	12	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_6	9.92534113742268	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-20	True	NA	-3	True	AATAAA	-15	NA	6473941	6448612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
transcript_21121.known	chr11	-	1654	2	FSM	ENSG00000110171.21	ENST00000533064.1	1654	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	NA	False	NA	-3	True	AATAAA	-15	NA	6450391	6448612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6449181_6449305
transcript_21131.known	chr11	-	2543	8	FSM	ENSG00000132254.13	ENST00000254584.6	2543	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_7	48.7258050896304	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	14	True	NA	NA	False	NA	NA	NA	6481312	6475679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_21132.known	chr11	-	1763	8	FSM	ENSG00000132254.13	ENST00000396777.8	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_7	38.9887477226391	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	-5	True	NA	NA	False	AATAAA	-16	NA	6481331	6476518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
transcript_21134.known	chr11	-	1560	8	FSM	ENSG00000132254.13	ENST00000531037.5	1560	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	100.838929962185	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAGCACTAGGAATAAA	2	True	NA	NA	False	NA	NA	NA	6481324	6476553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478858_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_21140.known	chr11	-	1430	7	FSM	ENSG00000132254.13	ENST00000423813.6	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	95.4474841062991	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGGTGTGCTCCCTGA	NA	False	NA	NA	False	NA	NA	NA	6481434	6476813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6481230
transcript_21161.known	chr11	+	608	4	FSM	ENSG00000132286.12	ENST00000533379.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	291.326086866399	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGTGGTTGTCTT	24	True	NA	NA	False	AGTAAA	-12	NA	6481507	6483058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6481556_6481756_6481853_6482044_6482290_6482839
transcript_21163.known	chr11	+	2788	3	FSM	ENSG00000132286.12	ENST00000254616.11	2788	3	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	68.5	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCTTCCCGTCCTTCC	17	True	NA	12	True	AATAAA	-17	NA	6481500	6484681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6481556_6481756_6481853_6482044
transcript_21165.known	chr11	+	516	3	FSM	ENSG00000132286.12	ENST00000531462.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	23.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGTGGTTGTCTTCA	22	True	NA	NA	False	AGTAAA	-14	NA	6481505	6483060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6481556_6482044_6482290_6482839
transcript_21166.known	chr11	+	2557	3	FSM	ENSG00000179532.13	ENST00000533649.1	2557	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGTTCTGTTCTTAA	NA	False	NA	7	True	AATATA	-16	NA	6546042	6549037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6547667_6547862_6548403_6548644
transcript_21167.known	chr11	+	1842	4	FSM	ENSG00000179532.13	ENST00000473019.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	13.4246870437348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGCTGGTTATTAATTG	NA	False	NA	NA	False	AATAAA	-15	NA	6497259	6504200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6497332_6497584_6497668_6498722_6498962_6502752
transcript_21168.nic	chr11	-	1760	7	NIC	ENSG00000132275.11	novel	6559	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	29.3636207273937	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	-7	True	NA	-5	True	AATAAA	-19	NA	6603616	6599919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602265_6603403
transcript_21171.known	chr11	-	726	4	FSM	ENSG00000132275.11	ENST00000534343.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	39.8357739838062	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	30	True	NA	-5	True	AATAAA	-19	NA	6603579	6599919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6603403
transcript_21172.nnic	chr11	-	521	3	Fusion	ENSG00000132275.11_ENSG00000254400.1	novel	399	2	NA	NA	-101	80242	multi-exon	FALSE	canonical	2	7	junction_1	1	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTTGGTATTCTAT	8858	False	NA	NA	False	AATAAA	-21	NA	6603717	6514829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_6514933_6592719_6592824_6603403
transcript_21173.known	chr11	-	6559	7	FSM	ENSG00000132275.11	ENST00000254605.11	6559	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	6.03922364399781	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATGTATAATATATAATA	-7	True	NA	NA	False	AATAAA	-18	NA	6603616	6595071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602216_6603403
transcript_21179.known	chr11	+	1759	13	FSM	ENSG00000166333.14	ENST00000299421.9	1759	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	219.683800545744	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	1	True	NA	16	True	AATAAA	-15	NA	6603773	6610870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6603823_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_2118.known	chr1	+	338	3	FSM	ENSG00000218510.9	ENST00000642072.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTACCCAATGAAATGAT	17	True	NA	NA	False	AATACA	-25	NA	22025521	22030374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025644_22027413_22027535_22030279
transcript_21183.known	chr11	+	1692	13	FSM	ENSG00000166333.14	ENST00000420936.6	1692	13	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	155.99330024787	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGCCTGTCACAAT	-15	True	NA	-21	True	NA	NA	NA	6603757	6610833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_21189.known	chr11	-	3210	13	FSM	ENSG00000166340.18	ENST00000647209.1	3210	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	85.5252967775552	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAATAATGTTGATAAC	7	True	NA	-24	True	NA	NA	NA	6619413	6613032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619260_6619383
transcript_21194.nic	chr11	+	1636	12	NIC	ENSG00000166333.14	novel	1759	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_2	350.720415598173	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	-1	True	NA	16	True	AATAAA	-15	NA	6603730	6610870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_6603823_6604179_6604361_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_21196.known	chr11	+	1801	12	FSM	ENSG00000166333.14	ENST00000537806.5	1801	12	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_1	162.835565794464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGCCTGTCACAATAA	-29	True	NA	-19	True	NA	NA	NA	6603743	6610835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_21198.known	chr11	+	1594	12	FSM	ENSG00000166333.14	ENST00000526711.5	1594	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	317.081004849492	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGGGGACATGGGGA	-1	True	NA	20	True	AATAAA	-19	NA	6603730	6610874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6603823_6604225_6604361_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_21200.known	chr11	-	3620	12	FSM	ENSG00000166340.18	ENST00000644831.1	3620	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.7304928626033	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAATGTCTGCTACAC	-9	True	NA	-39	True	NA	NA	NA	6619429	6612793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_21208.known	chr11	-	3640	12	FSM	ENSG00000166340.18	ENST00000643479.1	3640	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.8785750569859	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-9	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_2121.known	chr1	+	1518	3	FSM	ENSG00000218510.9	ENST00000634934.2	1518	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	-12	True	NA	11	True	AATAAA	-1	NA	22025492	22031223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025946_22027413_22027535_22030279
transcript_21212.known	chr11	-	3787	11	FSM	ENSG00000166340.18	ENST00000646777.1	3787	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.8673027960862	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-9	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_21213.known	chr11	-	5312	5	FSM	ENSG00000166337.11	ENST00000299424.9	5312	5	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_4	79.1596488117526	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTCACCATCACTAC	-16	True	NA	-15	True	AATAAA	-17	NA	6612216	6606293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6611012_6611188_6611304_6611387_6611453_6611663_6611819_6611957
transcript_21218.known	chr11	-	2107	5	FSM	ENSG00000166340.18	ENST00000524788.2	2107	5	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_4	18.9274932307477	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAGGGAATGCTATAAGC	7	True	NA	NA	False	NA	NA	NA	6619413	6616598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6616860_6616974_6617429_6617625_6618916_6619195_6619268_6619383
transcript_2122.known	chr1	-	1130	2	FSM	ENSG00000228397.3	ENST00000667783.1	1130	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACGTTTCGGCTTGTGTA	369	False	NA	NA	False	CATAAA	-15	NA	22025483	22023993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_22024446_22024805
transcript_21224.known	chr11	-	464	4	FSM	ENSG00000166340.18	ENST00000528571.6	464	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	106.172815101921	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGGGCATTACAGTCT	17	False	NA	NA	False	GGGGCT	-45	NA	6619403	6617207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6617429_6617625_6617777_6619195_6619268_6619383
transcript_21225.known	chr11	-	2290	4	FSM	ENSG00000166340.18	ENST00000645020.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	21.853044537445	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGTGCCCATCCCTCAA	-9	True	NA	NA	False	NA	NA	NA	6619429	6616546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6617429_6617625_6618916_6619195_6619268_6619383
transcript_21226.known	chr11	-	996	3	FSM	ENSG00000166340.18	ENST00000531754.2	996	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	16.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTCATTCATTTTCAT	NA	False	NA	NA	False	ATTAAA	-19	NA	6619448	6618056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6618916_6619195_6619268_6619383
transcript_21228.known	chr11	+	2074	12	FSM	ENSG00000166333.14	ENST00000396751.6	2074	12	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_5	61.2535713244542	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	43	False	NA	16	True	AATAAA	-15	NA	6603815	6610870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_2123.known	chr1	+	929	2	FSM	ENSG00000218510.9	ENST00000434233.2	929	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	22025187	22031023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025373_22030279
transcript_21231.known	chr11	-	448	2	FSM	ENSG00000158042.9	ENST00000532203.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCACACAGCTCAAACAC	-2	True	NA	NA	False	NA	NA	NA	6683316	6682148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6682403_6683122
transcript_21233.known	chr11	-	2305	3	FSM	ENSG00000158042.9	ENST00000288937.7	2305	3	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	15.5	3832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGTACATGAATCC	-26	True	NA	NA	False	NA	NA	NA	6683340	6680384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6682403_6682746_6682816_6683122
transcript_21234.known	chr11	-	1002	2	FSM	ENSG00000158042.9	ENST00000529958.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTATATGAATATAT	18	True	NA	-67	True	AATAGA	-4	NA	6683296	6681950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6682403_6682746
transcript_21238.nnic	chr11	-	801	3	Fusion	ENSG00000283415.2_ENSG00000188124.4	novel	4224	2	NA	NA	-49	-3722	multi-exon	FALSE	canonical	0	0	junction_1	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATTCCAACTACATTT	NA	False	NA	NA	False	AATAAA	-16	NA	6926927	6769347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_6769495_6924497_6924576_6926351
transcript_21239.nnic	chr11	-	837	3	Fusion	ENSG00000283415.2_ENSG00000184933.6	novel	4295	2	NA	NA	-49	-1560	multi-exon	FALSE	canonical	0	0	junction_1	2	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGATATCATGCATTAT	NA	False	NA	NA	False	AATAAA	-19	NA	6926927	6793295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_6793479_6924497_6924576_6926351
transcript_2124.known	chr1	+	1077	2	FSM	ENSG00000218510.9	ENST00000416769.2	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	6	True	NA	11	True	AATAAA	-1	NA	22025510	22031223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025644_22030279
transcript_21243.known	chr11	+	1503	8	FSM	ENSG00000149054.16	ENST00000610573.4	1503	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	21.1650462714701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGATTAGAGGCACCCAC	-19	True	NA	NA	False	NA	NA	NA	6926422	6984238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689_6955783_6984128
transcript_21246.nic	chr11	+	3510	7	NIC	ENSG00000149054.16	novel	3655	7	NA	NA	-8	0	intron_retention	FALSE	canonical	3	18	junction_1	18.4179863780551	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCTTCTGTAAACTAC	NA	False	NA	16	True	ATTAAA	-26	NA	6926414	6957848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_6926729_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
transcript_2125.known	chr1	+	1388	2	FSM	ENSG00000218510.9	ENST00000634712.2	1388	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGTGCTGTGGTGAT	-7	True	NA	7	True	ATTAAA	-14	NA	22025497	22031219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025946_22030279
transcript_21250.known	chr11	+	3655	7	FSM	ENSG00000149054.16	ENST00000278319.10	3655	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	5.03322295684717	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTCATCCTTTATAT	-16	True	NA	9	True	ATTAAA	-16	NA	6926425	6958047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
transcript_21257.known	chr11	+	1602	6	FSM	ENSG00000149054.16	ENST00000527171.5	1602	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	22.9834723225191	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCTATGAATGTTATCA	NA	False	NA	NA	False	AAAAAG	-14	NA	6926403	6956105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943545_6943642_6955689
transcript_2126.known	chr1	+	1435	6	FSM	ENSG00000070831.17	ENST00000315554.13	1435	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	211.187689035133	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATGAAGCTTTATTC	4	True	NA	NA	False	ATTAAA	-23	NA	22052708	22090807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22089942
transcript_21263.known	chr11	-	556	4	FSM	ENSG00000149050.10	ENST00000531083.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.48528137423857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATCAGAACTATGGGGAA	33	False	NA	NA	False	NA	NA	NA	7020314	7001447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7001556_7002708_7002852_7019682_7019746_7020072
transcript_21264.known	chr11	-	4892	3	FSM	ENSG00000149050.10	ENST00000278314.5	4892	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTAGAGGAGTCTT	1	True	NA	NA	False	AATAAA	-22	NA	7020346	6997084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7001556_7002708_7002856_7020072
transcript_21265.known	chr11	-	538	3	FSM	ENSG00000149050.10	ENST00000525017.1	538	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCTCCTCATTATTC	5	True	NA	NA	False	ATTAAA	-20	NA	7020342	7015819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7016025_7019682_7019746_7020072
transcript_21267.known	chr11	+	3328	24	FSM	ENSG00000166387.14	ENST00000299492.9	3328	24	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_5	84.2673977818379	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAGCTCACCATATCT	5	True	NA	29	True	AATAAA	-20	NA	7513998	7653756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7514122_7549439_7549540_7565552_7565768_7593131_7593225_7597559_7597674_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
transcript_21271.known	chr11	+	2965	20	FSM	ENSG00000166387.14	ENST00000530181.5	2965	20	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_12	20.5478968870781	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTCACCATATCTTTAA	8	True	NA	33	True	AATAAA	-24	NA	7605737	7653760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7606016_7610290_7610423_7620934_7621028_7625776_7625892_7628284_7628347_7629458_7629535_7630924_7631029_7632866_7632935_7634494_7634553_7635551_7635594_7639731_7639871_7641478_7641621_7642297_7642427_7648386_7648538_7648799_7648912_7649146_7649236_7649531_7649655_7650839_7650966_7651655_7651845_7653023
transcript_21276.known	chr11	+	1318	2	FSM	ENSG00000183801.8	ENST00000528308.1	1318	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGCTCAAATTATAATAA	8	True	NA	NA	False	NA	NA	NA	7485525	7488965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7486005_7488126
transcript_21286.nic	chr11	-	1308	9	NIC	ENSG00000166394.15	novel	1658	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_8	89.3220997290144	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-8	True	NA	-7	True	AATAAA	-16	NA	7674252	7665103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
transcript_21287.nic	chr11	-	1509	9	NIC	ENSG00000166394.15	novel	1249	9	NA	NA	-324	0	combination_of_known_junctions	FALSE	canonical	3	134	junction_8	74.4579369510061	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	2678	False	NA	-7	True	AATAAA	-16	NA	7674567	7665103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225
transcript_2129.known	chr1	-	482	3	FSM	ENSG00000162552.15	ENST00000441048.1	482	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCATGGAGGAGACAG	NA	False	NA	NA	False	NA	NA	NA	22143969	22127473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_22127482_22129615_22129852_22143731
transcript_2130.known	chr1	+	8701	18	FSM	ENSG00000184677.18	ENST00000375647.5	8701	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	6.91870740172806	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACTATTCCCTGCATTC	-3	True	NA	10	True	AATAAA	-17	NA	22451850	22531154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22452005_22489879_22490646_22491399_22491534_22501491_22501685_22502298_22502442_22506048_22506242_22508000_22508138_22508529_22508732_22509099_22509234_22511178_22511348_22511675_22512135_22512923_22513131_22517299_22517465_22520060_22520276_22521495_22521659_22522376_22522464_22524217_22524445_22526201
transcript_21303.known	chr11	-	1249	9	FSM	ENSG00000166394.15	ENST00000299498.11	1249	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	103.418748300296	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-17	True	NA	-7	True	AATAAA	-16	NA	7673500	7665103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_21304.known	chr11	-	1338	10	FSM	ENSG00000166394.15	ENST00000524790.5	1338	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	154.244955096883	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGTGTGGCTCTG	11	True	NA	-3	True	AATAAA	-20	NA	7673472	7665099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7665547_7665826_7665940_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_21318.nnic	chr11	-	1753	3	NNC	ENSG00000254951.7	novel	2503	8	NA	NA	-343	-18195	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATGTATGTTCAAGTGC	NA	False	NA	NA	False	AATAAA	-20	NA	7906298	7899175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_7900512_7905602_7905826_7906104
transcript_21319.nnic	chr11	-	1495	2	NNC	ENSG00000254951.7	novel	2503	8	NA	NA	21457	-2864	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGCTTGAGGGAATAAA	NA	False	NA	NA	False	NA	NA	NA	7861525	7853614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_7854964_7861379
transcript_2132.known	chr1	+	8368	16	FSM	ENSG00000184677.18	ENST00000374651.8	8368	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.56986009418227	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTCCCTGCATTCTCT	-3	True	NA	13	True	AATAAA	-20	NA	22451850	22531157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22452005_22489879_22490646_22491399_22491534_22506048_22506242_22508000_22508138_22508529_22508732_22509099_22509234_22511178_22511348_22511675_22512135_22512923_22513131_22517299_22517465_22520060_22520276_22521495_22521659_22522376_22522464_22524217_22524445_22526201
transcript_21320.nnic	chr11	-	999	2	NNC	ENSG00000254951.7	novel	2503	8	NA	NA	-123	-2589	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTGCATACCTCATTC	182	False	NA	NA	False	AATAAA	-28	NA	7906078	7883569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_7884093_7905602
transcript_21323.nnic	chr11	+	1838	3	Antisense	novelGene_ENSG00000279000.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	3	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTT	NA	False	NA	12	True	AATAAA	-18	NA	7906066	7935974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_7906340_7907161_7907336_7934583
transcript_21326.nnic	chr11	+	1824	3	Antisense	novelGene_ENSG00000279000.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	2.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTT	203	False	NA	12	True	AATAAA	-18	NA	7906407	7935974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_7906667_7907161_7907336_7934583
transcript_21329.known	chr11	+	6920	8	FSM	ENSG00000175390.15	ENST00000651655.1	6920	8	0	0	0	0	multi-exon	FALSE	canonical	3	2169	junction_2	108.21784529742	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAAACAATACCTTATAT	0	True	NA	NA	False	TATAAA	-20	NA	7987336	8001852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_21330.known	chr11	+	844	8	FSM	ENSG00000175390.15	ENST00000531329.6	844	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	851.57180003347	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCATCTTATGTGAG	3	True	NA	-4	True	AATAAA	-21	NA	7987339	7996167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7987374_7991825_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_21331.known	chr11	+	3395	3	FSM	ENSG00000175390.15	ENST00000677795.1	3395	3	0	0	0	0	multi-exon	FALSE	canonical	3	2422	junction_1	54.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTTATGTGAGTTTATT	3399	False	NA	2	True	AATAAA	-27	NA	7990800	7996173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7993025_7994425_7995368_7995944
transcript_21337.known	chr11	-	2929	6	FSM	ENSG00000166405.15	ENST00000343202.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	13.1969693490589	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	NA	False	NA	NA	False	GATAAA	-1	NA	8169055	8108941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8111138_8126658_8126805_8137377_8137472_8138271_8138348_8139966_8140194_8168865
transcript_21346.nic	chr11	-	837	3	ISM	ENSG00000166405.15	ENST00000528463.5	1211	7	-100	28984	-53	-595	5prime_fragment	FALSE	canonical	3	47	junction_1	0.5	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTAACATC	NA	False	NA	NA	False	NA	NA	NA	8169108	8139648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_8140194_8153374_8153424_8168865
transcript_21347.known	chr11	-	1300	2	FSM	ENSG00000166405.15	ENST00000419822.2	1300	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTACTTTCTGCAGAA	-8	True	NA	NA	False	CATAAA	-42	NA	8169025	8139053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8140194_8168865
transcript_21348.nnic	chr11	-	880	4	NNC	ENSG00000166407.14	novel	1294	4	NA	NA	504	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACTCTGCGTTGTTCAC	6218	False	NA	NA	False	ATTAAA	-20	NA	8262884	8224308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_8224722_8226974_8227101_8230290_8230505_8262757
transcript_21349.known	chr11	-	1294	4	FSM	ENSG00000166407.14	ENST00000335790.8	1294	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACTCTGCGTTGTTCAC	-1	True	NA	NA	False	ATTAAA	-20	NA	8263878	8224308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8224722_8226974_8227101_8230290_8230505_8263337
transcript_2135.known	chr1	+	3085	21	FSM	ENSG00000004487.18	ENST00000400181.9	3085	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1121.75106307059	4607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCTCTTTTGTTCCTTT	-37	True	NA	16	True	AATAAA	-17	NA	23019467	23083689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23019948_23030468_23030635_23044426_23044487_23050386_23050521_23053760_23053840_23055068_23055162_23055931_23056039_23057483_23057566_23059072_23059168_23066059_23066072_23068538_23068682_23069060_23069152_23071224_23071360_23072123_23072198_23073291_23073404_23077227_23077361_23078989_23079178_23079552_23079668_23081445_23081574_23082219_23082367_23083178
transcript_21350.known	chr11	-	1038	4	FSM	ENSG00000166407.14	ENST00000428101.6	1038	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAGGTTACTCTGCGTTG	386	False	NA	NA	False	ATTAAA	-15	NA	8268716	8224313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8224722_8226974_8227101_8230290_8230505_8268426
transcript_21368.nnic	chr11	-	2543	13	NIC	ENSG00000130413.16	novel	2558	13	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_12	15.7524248574272	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	NA	False	NA	-7	True	AATAAA	-19	NA	8594280	8391870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
transcript_21385.known	chr11	-	2558	13	FSM	ENSG00000130413.16	ENST00000396672.5	2558	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	26.371807337045	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-7	True	NA	-7	True	AATAAA	-19	NA	8593956	8391870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8593743
transcript_21387.nnic	chr11	-	356	2	NNC	ENSG00000130413.16	novel	2796	16	NA	NA	-1	-97753	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTCATCATGT	NA	False	NA	NA	False	AATAAA	-20	NA	8594290	8572571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_8572720_8594082
transcript_21388.known	chr11	-	1991	11	FSM	ENSG00000130413.16	ENST00000358872.7	1991	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	28.4640123664953	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-9	True	NA	-7	True	AATAAA	-19	NA	8594228	8391870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8594082
transcript_21390.nnic	chr11	-	865	5	NNC	ENSG00000166436.17	novel	10695	25	NA	NA	-21	-2354	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.866025403784439	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATAGTTATTTTTTCCA	NA	False	NA	NA	False	AATAAA	-22	NA	8682715	8674370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_8674685_8674805_8674884_8679619_8679815_8679900_8680064_8682600
transcript_21392.known	chr11	-	2679	19	FSM	ENSG00000166444.19	ENST00000530438.5	2679	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_17	35.2480189444197	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCTTCTCAGTAGCAGA	192	False	NA	NA	False	AATGAA	-23	NA	8811016	8694095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212_8699391_8702571_8702721_8707084_8707226_8707776_8707855_8710844_8710915_8711121_8711232_8712550_8712736_8713997_8714043_8714609_8714707_8715602_8715819_8717740_8717893_8726072_8726210_8750620_8750726_8810516
transcript_21399.known	chr11	-	769	5	FSM	ENSG00000166444.19	ENST00000532162.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	13.7908484148003	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAATATGGCAAATAT	3	True	NA	NA	False	NA	NA	NA	8699020	8693888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932
transcript_21400.known	chr11	-	600	5	FSM	ENSG00000166444.19	ENST00000526057.5	600	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	37.6065153929475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGACATGCTGCTGCTGGC	-27	True	NA	NA	False	NA	NA	NA	8871079	8715722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8715819_8717740_8717893_8726072_8726210_8811246_8811336_8870953
transcript_21409.known	chr11	+	406	5	FSM	ENSG00000166441.13	ENST00000532359.5	406	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	2784.95550907012	7346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	17	True	NA	29	True	ATTAAA	-17	NA	8682791	8685848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684822_8684893_8685677
transcript_2141.known	chr1	-	1190	4	FSM	ENSG00000169641.14	ENST00000471849.5	1190	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	41.3628926562068	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAGAAAATGAAAAGAA	9271	False	NA	NA	False	AAGAAA	-2	NA	23168845	23093442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23094381_23109021_23109128_23109584_23109651_23168765
transcript_21410.known	chr11	+	297	3	FSM	ENSG00000166441.13	ENST00000525981.1	297	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3596.5	2821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	200	False	NA	28	True	ATTAAA	-16	NA	8683214	8685847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8683266_8684005_8684082_8685677
transcript_21411.known	chr11	+	558	5	FSM	ENSG00000166441.13	ENST00000524496.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2812.81002735698	5267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	14	True	NA	28	True	ATTAAA	-16	NA	8682788	8685847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201_8683266_8683960_8684082_8684717_8684893_8685677
transcript_21412.known	chr11	+	607	2	FSM	ENSG00000166441.13	ENST00000529227.5	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	3888	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTCCTGCCTCAGCCT	13	True	NA	NA	False	NA	NA	NA	8682787	8683779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201
transcript_21413.known	chr11	+	651	5	FSM	ENSG00000166441.13	ENST00000534599.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2811.25207870088	4576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTGGTGTGAGTGTA	17	True	NA	26	True	ATTAAA	-14	NA	8682791	8685845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201_8683266_8683862_8684082_8684717_8684893_8685677
transcript_21416.known	chr11	+	1273	6	FSM	ENSG00000166452.12	ENST00000309377.9	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	80.8099003835545	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	-3	True	NA	14	True	AATAAA	-17	NA	8911188	8920079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_21423.known	chr11	+	1232	5	FSM	ENSG00000166452.12	ENST00000309357.8	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	44.0113621693308	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	32	False	NA	19	True	AATAAA	-22	NA	8911153	8920084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8919336
transcript_21425.known	chr11	+	1247	5	FSM	ENSG00000166452.12	ENST00000299576.9	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	84.8807987709824	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	17	False	NA	19	True	AATAAA	-22	NA	8911138	8920084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911224_8911443_8911672_8914825_8914931_8917286_8917368_8919336
transcript_21430.known	chr11	+	1022	5	FSM	ENSG00000166452.12	ENST00000534147.5	1022	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	70.8007768318964	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACCTCGTGATCCACC	155	False	NA	NA	False	NA	NA	NA	8911442	8919862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_21437.known	chr11	+	1084	4	FSM	ENSG00000166452.12	ENST00000396648.6	1084	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	61.478090044792	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGATTACAGGCGTGA	50	False	NA	NA	False	NA	NA	NA	8911337	8919900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911672_8914825_8914931_8917286_8917368_8919336
transcript_21442.known	chr11	+	513	3	FSM	ENSG00000166452.12	ENST00000529942.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	58	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTCTCTTAATAGCT	177	False	NA	2	True	AATAAA	-7	NA	8911464	8919537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911672_8914825_8914931_8919336
transcript_21445.known	chr11	-	1844	5	FSM	ENSG00000175348.11	ENST00000534025.6	1844	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_4	22.4833271559171	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGACTACTGTTTTAT	-22	True	NA	79	True	TATAAA	-17	NA	8964442	8947201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964208
transcript_21446.known	chr11	-	1433	5	FSM	ENSG00000175348.11	ENST00000525069.5	1433	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	60.3676237730126	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCTGGATTGATAATAT	NA	False	NA	3	True	AATAAA	-23	NA	8965011	8947500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964889
transcript_21450.known	chr11	-	1659	4	FSM	ENSG00000175348.11	ENST00000309134.9	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	63.1682057859982	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	-21	True	NA	-13	True	AATAAA	-19	NA	8964441	8947293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8964208
transcript_21461.known	chr11	-	3761	7	FSM	ENSG00000175352.11	ENST00000309166.8	3761	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	6.49786289653931	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	0	True	NA	-4	True	AATAAA	-19	NA	9004001	8980575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761
transcript_21463.known	chr11	-	2220	4	FSM	ENSG00000184014.9	ENST00000532696.2	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	18.263503375737	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTAAAGTTTCTCTGGT	423	False	NA	NA	False	NA	NA	NA	9264992	9202311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9204318_9206672_9206783_9207560_9207633_9264960
transcript_21464.known	chr11	-	1440	8	FSM	ENSG00000166471.11	ENST00000611268.4	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	98.0112446693371	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACATTTGGGATTT	940	False	NA	-8	True	AATAAA	-18	NA	9314567	9280656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_21465.nnic	chr11	-	1400	7	NIC	ENSG00000166471.11	novel	1443	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_6	151.647343091353	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	-33	True	NA	-5	True	AATAAA	-21	NA	9314642	9280653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9314320
transcript_21469.known	chr11	-	3798	7	FSM	ENSG00000166471.11	ENST00000528080.6	3798	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	18.7409237291608	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	16	True	NA	-5	True	AATAAA	-21	NA	9314593	9280653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_21482.known	chr11	-	723	3	FSM	ENSG00000166471.11	ENST00000533723.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	1	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTGCTGAACTAATT	-24	True	NA	NA	False	ATTAAA	-40	NA	9314633	9295095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9295388_9299583_9299702_9314320
transcript_21483.nnic	chr11	-	602	2	NIC	ENSG00000166471.11	novel	723	3	NA	NA	-6	-12	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCACTTTAATCCTATTT	-33	True	NA	NA	False	ATTAAA	-28	NA	9314642	9295107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_9295388_9314320
transcript_21484.known	chr11	+	6162	25	FSM	ENSG00000205339.10	ENST00000379719.8	6162	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.3988506365573	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTGTCAGTTCT	9	True	NA	13	True	AATAAA	-22	NA	9384651	9448127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030_9429197_9429673_9429835_9430874_9431004_9433569_9433637_9433720_9433847_9434933_9435032_9436270_9436367_9437753_9437975_9438079_9438286_9440454_9440662_9442080_9442198_9445096
transcript_21491.nic	chr11	+	1923	13	ISM	ENSG00000205339.10	ENST00000379719.8	6162	25	-59	19171	-59	3632	5prime_fragment	TRUE	canonical	0	0	junction_2	50.5131308561337	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGGGAATAGAGATTAGC	2	True	NA	NA	False	NA	NA	NA	9384592	9428956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539
transcript_21495.known	chr11	+	182	1	FSM	ENSG00000201998.1	ENST00000365128.1	182	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAGGGAATAGAGATTA	5	False	NA	NA	False	NA	NA	NA	9428772	9428954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9428800_9429000
transcript_21496.known	chr11	-	1147	1	FSM	ENSG00000268403.2	ENST00000596206.2	1147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGGATTACTGTTTTTTG	NA	False	NA	-6	True	AATAAA	-14	NA	9460702	9459555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9459600_9460700
transcript_21497.known	chr11	+	2900	16	FSM	ENSG00000166478.10	ENST00000396602.7	2900	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	20.1732496142788	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	-7	True	NA	20	True	AATACA	-19	NA	9461011	9528524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_21498.known	chr11	+	2562	15	FSM	ENSG00000166478.10	ENST00000299606.6	2562	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	48.0756207044948	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAAAGATTTTGCTTAG	4	True	NA	NA	False	ATTAAA	-19	NA	9461022	9528281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_21499.known	chr11	+	2777	10	FSM	ENSG00000166483.12	ENST00000681684.1	2777	10	0	0	0	0	multi-exon	TRUE	canonical	3	596	junction_6	50.4138428961288	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTAACAGATGTTGAAAA	818	False	NA	NA	False	AATATA	-35	NA	9575495	9589622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9576094_9576229_9576294_9576486_9576660_9577141_9577264_9581531_9581679_9585257_9585354_9585441_9585528_9586448_9586620_9586710_9586857_9588448
transcript_21501.known	chr11	+	468	1	FSM	ENSG00000243964.1	ENST00000475608.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTCCAGATGCCTAAT	7	True	NA	NA	False	NA	NA	NA	9606141	9606609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9606100_9606600
transcript_21502.known	chr11	+	483	1	FSM	ENSG00000239470.3	ENST00000472300.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	39	False	NA	NA	False	NA	NA	NA	9660437	9660920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9660400_9660900
transcript_21503.known	chr11	+	4884	12	FSM	ENSG00000133789.15	ENST00000318950.11	4884	12	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	54.2234434371501	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTGTATCTATGTGTA	-32	True	NA	53	True	AATAAA	-16	NA	9664076	9752993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_21511.known	chr11	+	3538	11	FSM	ENSG00000133789.15	ENST00000447399.6	3538	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	129.60339501726	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATAGTTGCCTTTATAA	-32	True	NA	-13	True	AATAAA	-19	NA	9664076	9751821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9664279_9694145_9694287_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_21515.known	chr11	+	3006	9	FSM	ENSG00000133789.15	ENST00000524817.5	3006	9	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_6	46.0487174088486	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTACTTGGGAGGC	26	True	NA	NA	False	TTTAAA	-13	NA	9664134	9741953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180
transcript_21525.nnic	chr11	-	1261	7	NIC	ENSG00000133812.18	novel	1250	8	NA	NA	-205	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	66.9985489063424	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCTTGGGTAAATTGTT	NA	False	NA	-5	True	AATAAA	-21	NA	10044820	10016420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_10016780_10020162_10020285_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
transcript_21528.nnic	chr11	-	1321	6	FSM	ENSG00000133812.18	ENST00000533661.2	894	6	-387	-40	-387	0	multi-exon	FALSE	canonical	3	13	junction_1	61.8921642859579	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCTTGGGTAAATTGTT	NA	False	NA	-5	True	AATAAA	-21	NA	10045002	10016420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10016780_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
transcript_2153.known	chr1	-	2694	11	FSM	ENSG00000125944.21	ENST00000374612.5	2694	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	460.752688543431	5793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-1	True	NA	-19	True	AATAAA	-23	NA	23344322	23309785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
transcript_21530.known	chr11	-	923	2	NNC	ENSG00000133812.18	novel	555	4	NA	NA	2282	-574	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGCCTTAACTCACTCCAGA	7305	False	NA	NA	False	NA	NA	NA	9810472	9808573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_9809273_9810248
transcript_21535.known	chr11	-	2311	3	FSM	ENSG00000245522.2	ENST00000500698.1	2311	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGGATATTTGAGTGT	-3	True	NA	-68	True	AATACA	-15	NA	9759533	9754769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9756899_9757766_9757844_9759428
transcript_21537.known	chr11	+	3714	2	FSM	ENSG00000246273.8	ENST00000663578.1	3714	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTGAACACAAAATAAAAG	-37	True	NA	-28	True	NA	NA	NA	9758267	9811325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9758504_9807847
transcript_2154.known	chr1	-	2691	11	FSM	ENSG00000125944.21	ENST00000374616.7	2691	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	644.336255382234	4744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	340	False	NA	-16	True	AATAAA	-26	NA	23344310	23309782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
transcript_21540.known	chr11	-	803	2	FSM	ENSG00000254554.1	ENST00000526906.1	803	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGCAGGCAGCTTCAA	1133	False	NA	NA	False	NA	NA	NA	10303704	10302656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10303051_10303295
transcript_21542.known	chr11	+	1492	4	FSM	ENSG00000148926.10	ENST00000278175.10	1492	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	20.9814733091416	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCTCGGCTCGGCT	-2	True	NA	34	True	AATAAA	-16	NA	10305072	10307397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331
transcript_21544.known	chr11	+	1640	3	FSM	ENSG00000148926.10	ENST00000534464.1	1640	3	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	0.5	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCATTCTCTCGGCTCGG	-2	True	NA	32	True	AATAAA	-14	NA	10305072	10307395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10305230_10305679_10306099_10306331
transcript_21545.known	chr11	+	1839	2	FSM	ENSG00000148926.10	ENST00000530439.1	1839	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAACAGCAAACCAATAAA	-1	True	NA	-1	True	CATAAA	-12	NA	10305073	10307362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10305230_10305679
transcript_21546.known	chr11	+	1889	3	FSM	ENSG00000148926.10	ENST00000528655.5	1889	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	22	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATATGCGAACAGCAAAC	9	False	NA	-8	True	CATAAA	-5	NA	10305083	10307355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10305799_10305948_10306099_10306331
transcript_2155.known	chr1	-	1837	9	FSM	ENSG00000125944.21	ENST00000606561.5	1837	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	533.549420742821	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCTGAAGAAATCACTATT	-13	True	NA	NA	False	NA	NA	NA	23344295	23310332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23337753_23337862_23338489_23338609_23344210
transcript_21550.known	chr11	-	4049	6	FSM	ENSG00000110315.7	ENST00000265981.7	4049	6	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	21.1319663069957	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTAACTGCTAT	12	True	NA	-17	True	ATTAAA	-16	NA	10541187	10511672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_21553.known	chr11	-	5818	1	FSM	ENSG00000110315.7	ENST00000534281.1	5818	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	824	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGAGATTATTTTCCTA	NA	False	NA	-23	True	AATAAA	-28	NA	10517740	10511922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10511900_10517700
transcript_21554.known	chr11	-	1374	5	FSM	ENSG00000110315.7	ENST00000528665.5	1374	5	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	22.3313120975907	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGGTACTAGATAC	9	True	NA	NA	False	NA	NA	NA	10541190	10518317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_21556.known	chr11	+	643	3	FSM	ENSG00000177112.9	ENST00000663840.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCCCGTTGCCTAGAG	-22	True	NA	NA	False	AATAAA	-34	NA	10541257	10599936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10541543_10594116_10594229_10599690
transcript_21558.known	chr11	+	4330	25	FSM	ENSG00000198730.9	ENST00000361367.7	4330	25	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_11	21.0474002089464	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTAACTTCGTGTCTT	14	True	NA	10	True	AATAAA	-18	NA	10751245	10779746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011_10774170_10775206_10775304_10775520_10775634_10778678
transcript_21576.known	chr11	-	3794	22	FSM	ENSG00000110321.19	ENST00000339995.11	3794	22	0	0	0	0	multi-exon	FALSE	canonical	3	5830	junction_4	473.615404120694	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	5	True	NA	-8	True	AATAAA	-16	NA	10808926	10797053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_21577.known	chr11	-	563	4	FSM	ENSG00000110321.19	ENST00000530702.2	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	3079.60996808939	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAACTCATCCTTAAAGG	2	True	NA	NA	False	NA	NA	NA	10808929	10804945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10805016_10805906_10806048_10807254_10807382_10808704
transcript_21578.known	chr11	-	591	5	FSM	ENSG00000110321.19	ENST00000530211.6	591	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	2857.76048681481	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAAGTTTTAAATATTG	8	True	NA	NA	False	NA	NA	NA	10808923	10804915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10805016_10805906_10806048_10806819_10806886_10807254_10807320_10808704
transcript_21579.known	chr11	-	523	2	FSM	ENSG00000110321.19	ENST00000534246.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	6053	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTCCGAGTTCAGTC	12	True	NA	NA	False	AATAAA	-23	NA	10808919	10807073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10807382_10808704
transcript_21581.known	chr11	+	1094	3	FSM	ENSG00000247271.8	ENST00000501079.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	-5	True	NA	13	True	AATAAA	-20	NA	10858216	10879272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10858352_10865260_10865328_10878380
transcript_21582.known	chr11	+	829	3	FSM	ENSG00000247271.8	ENST00000529014.6	829	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACACTGTGGAGAGT	4	True	NA	NA	False	NA	NA	NA	10858225	10878425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10858943_10865260_10865328_10878380
transcript_21583.known	chr11	-	879	3	FSM	ENSG00000236287.8	ENST00000534690.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	59.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGATAAGCAGTTGCAAC	422	False	NA	NA	False	NA	NA	NA	10857637	10854736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10855087_10856143_10856258_10857222
transcript_21584.known	chr11	+	1040	2	FSM	ENSG00000247271.8	ENST00000664153.2	1042	2	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	-3	True	NA	13	True	AATAAA	-20	NA	10858218	10879272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10858367_10878380
transcript_21585.known	chr11	-	2741	3	FSM	ENSG00000236287.8	ENST00000432999.6	2741	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	52.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATTATTGGTATTT	-14	False	NA	1	True	TTTAAA	-5	NA	10858073	10852703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10855119_10856143_10856258_10857861
transcript_21586.known	chr11	+	1020	3	FSM	ENSG00000247271.8	ENST00000658394.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGCTTTTTTTTTGTTT	3	True	NA	19	True	AATAAA	-26	NA	10858224	10879278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10858280_10865260_10865328_10878380
transcript_21587.known	chr11	-	2503	11	FSM	ENSG00000110328.6	ENST00000227756.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	5.17300686255103	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTGCAGTCATTTGGT	1	True	NA	-13	True	AATAAA	-16	NA	11622005	11270876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_11271291_11293028_11293194_11327085_11327182_11332693_11332832_11340818_11341005_11372514_11372630_11377181_11377380_11379080_11379265_11432620_11432788_11448743_11448937_11621358
transcript_21588.known	chr11	+	7775	27	FSM	ENSG00000170242.19	ENST00000339865.9	7775	27	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	43.1299296127685	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTCTGTGTAATTTTT	NA	False	NA	3	True	AATAAA	-14	NA	11841422	11959323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_11842225_11884466_11884581_11891967_11892107_11897596_11897694_11902714_11902861_11903262_11903343_11905398_11905549_11920155_11920252_11920341_11920495_11922723_11922892_11929433_11929566_11930043_11930121_11930695_11930752_11933003_11933117_11933830_11933936_11936302_11936511_11938256_11938373_11940428_11940549_11942334_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
transcript_2159.known	chr1	-	3788	3	FSM	ENSG00000125945.15	ENST00000374608.3	3788	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGTGAGCCACTATGG	2183	False	NA	-1	True	AATAAA	-19	NA	23368386	23359974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23363222_23367041_23367169_23367972
transcript_21595.known	chr11	+	8627	13	FSM	ENSG00000197702.14	ENST00000334956.15	8627	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	8.21034239372648	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTTTCTCTCCCAT	-11	True	NA	38	True	ATTAAA	-45	NA	12377570	12535356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_12377784_12473744_12473835_12473912_12473984_12477846_12477950_12496457_12496599_12504313_12504430_12508583_12508643_12511513_12511534_12513298_12513361_12513996_12514066_12517609_12517712_12518444_12518518_12527848
transcript_2160.nnic	chr1	+	688	3	NNC	ENSG00000249087.8	novel	483	3	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	137	False	NA	17	True	AATAAA	-23	NA	23369126	23371783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_23369325_23371138_23371210_23371364
transcript_21601.known	chr11	-	1520	3	FSM	ENSG00000251381.8	ENST00000534477.6	1520	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTTTTTTTTTAGT	NA	False	NA	NA	False	AATAAA	-13	NA	12989589	12979628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_12980910_12986039_12986145_12989455
transcript_21602.known	chr11	-	1800	2	FSM	ENSG00000251381.8	ENST00000671253.1	1800	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGAATTAGAGATTCAT	NA	False	NA	NA	False	AATACA	-16	NA	12989589	12979243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_12980910_12989455
transcript_21603.known	chr11	-	1558	2	FSM	ENSG00000251381.8	ENST00000504230.2	1558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATCCTGTCCATGTGTT	-4	True	NA	NA	False	NA	NA	NA	12989548	12979534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_12981000_12989455
transcript_21605.known	chr11	+	2728	19	FSM	ENSG00000133794.20	ENST00000403510.8	2728	19	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	9.52854710207927	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATACTGTTCACATTTCA	-35	True	NA	NA	False	AATAAA	-17	NA	13277789	13387262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_13277924_13309986_13310060_13349944_13350071_13354300_13354449_13356738_13356778_13357054_13357097_13358433_13358592_13360344_13360425_13365499_13365593_13366664_13366783_13369617_13369768_13372162_13372410_13374094_13374202_13375611_13375763_13376639_13376729_13378336_13378446_13381160_13381255_13385688_13385792_13386595
transcript_2161.nic	chr1	+	767	3	FSM	ENSG00000249087.8	ENST00000518600.2	483	3	-284	0	-10	0	multi-exon	FALSE	canonical	2	3	junction_2	4	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	NA	False	NA	17	True	AATAAA	-23	NA	23368938	23371783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369325_23371138_23371210_23371473
transcript_21610.known	chr11	-	2439	9	FSM	ENSG00000148925.11	ENST00000278174.10	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	54.4149278691059	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAACCACATTGACCAG	12	True	NA	-18	True	AATAAA	-30	NA	13463222	13388007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13463091
transcript_21611.known	chr11	-	1662	8	FSM	ENSG00000148925.11	ENST00000528120.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_7	22.0611395342811	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTTTTAAAGACCAAAG	-63	True	NA	NA	False	NA	NA	NA	13463297	13388701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
transcript_21615.known	chr11	+	5266	12	FSM	ENSG00000197601.13	ENST00000354817.8	5266	12	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_6	32.450852858433	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTCCTTTGCA	-8	True	NA	21	True	ATTAAA	-22	NA	13668667	13732346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965_13713034_13714508_13714681_13721729_13721860_13727555_13727684_13728611
transcript_2162.nic	chr1	+	728	3	FSM	ENSG00000249087.8	ENST00000690463.1	706	3	-25	3	-10	0	multi-exon	FALSE	canonical	3	11	junction_1	8	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	NA	False	NA	17	True	AATAAA	-23	NA	23368938	23371783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369325_23371138_23371210_23371512
transcript_21620.nic	chr11	+	1423	6	ISM	ENSG00000197601.13	ENST00000532701.1	1109	8	-56	780	-13	-780	intron_retention	TRUE	canonical	3	276	junction_5	33.432917910347	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTCCCCTAAGCATGAT	-21	True	NA	NA	False	AATGAA	-12	NA	13668654	13712304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763
transcript_21623.nic	chr11	+	1000	4	ISM	ENSG00000197601.13	ENST00000532701.1	1109	8	-56	4709	-13	-2724	5prime_fragment	FALSE	canonical	3	317	junction_3	20.4613456709637	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCTTTGGATTCAA	-21	True	NA	NA	False	AAAACA	-10	NA	13668654	13708375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899
transcript_21627.known	chr11	+	1109	8	FSM	ENSG00000197601.13	ENST00000532701.1	1109	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_6	35.4014873433652	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCTGAAGTTTTAATGT	-4	True	NA	NA	False	AATAAA	-15	NA	13668710	13713084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965
transcript_21628.known	chr11	-	684	2	FSM	ENSG00000254438.1	ENST00000532065.1	684	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGGTGCTGTCTTGTGTGG	NA	False	NA	NA	False	AATAAA	-21	NA	13924863	13921449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_13921962_13924691
transcript_2164.nic	chr1	+	947	3	FSM	ENSG00000249087.8	ENST00000689840.1	932	3	-15	0	-1	0	multi-exon	FALSE	canonical	2	3	junction_2	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	-14	True	NA	17	True	AATAAA	-23	NA	23368947	23371783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369514_23371138_23371210_23371473
transcript_21643.nnic	chr11	-	2006	6	NNC	ENSG00000133818.14	novel	2343	6	NA	NA	1251	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_5	436.583371190429	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	NA	False	NA	-16	True	ATTAAA	-19	NA	14340843	14277921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14340759
transcript_21644.known	chr11	-	2343	6	FSM	ENSG00000133818.14	ENST00000256196.9	2343	6	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_5	142.34240408255	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-28	True	NA	-16	True	ATTAAA	-19	NA	14359183	14277921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358762
transcript_2165.known	chr1	+	606	3	FSM	ENSG00000249087.8	ENST00000437367.4	898	3	286	6	12	0	multi-exon	FALSE	canonical	3	19	junction_1	4	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	33	False	NA	17	True	AATAAA	-23	NA	23369249	23371783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369514_23371138_23371210_23371512
transcript_21653.known	chr11	-	1884	5	FSM	ENSG00000133818.14	ENST00000414023.6	1884	5	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_1	60.6506389084237	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCAGGTGCTAGAAT	NA	False	NA	-58	True	NA	NA	NA	14295859	14277963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767
transcript_21654.known	chr11	-	732	6	FSM	ENSG00000133818.14	ENST00000531807.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_5	366.437661819852	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACCAGAACCAACACGGAA	NA	False	NA	NA	False	NA	NA	NA	14342094	14279396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14341809
transcript_21659.known	chr11	-	1527	10	FSM	ENSG00000129084.18	ENST00000530457.5	1527	10	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_9	455.314055228794	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAACTGTGAAATAAAAT	5	True	NA	-39	True	NA	NA	NA	14520363	14504912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519904
transcript_2166.known	chr1	+	375	3	FSM	ENSG00000249087.8	ENST00000458053.4	375	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	12.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	7	True	NA	17	True	AATAAA	-23	NA	23368996	23371783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369030_23371138_23371210_23371512
transcript_2167.known	chr1	+	461	2	FSM	ENSG00000249087.8	ENST00000518821.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAATGAGTACCTACTG	21	True	NA	NA	False	NA	NA	NA	23369237	23371512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369325_23371138
transcript_21675.known	chr11	-	1195	10	FSM	ENSG00000129084.18	ENST00000396394.7	1195	10	0	0	0	0	multi-exon	FALSE	canonical	3	1328	junction_9	119.88420338903	9844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-18	True	NA	-2	True	AATAAA	-20	NA	14520386	14504875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
transcript_21676.known	chr11	-	588	3	FSM	ENSG00000129084.18	ENST00000532256.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	842	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAACAAGGTTCAGC	-14	True	NA	NA	False	NA	NA	NA	14520382	14517948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14517982_14518996_14519042_14519872
transcript_21678.known	chr11	-	3481	22	FSM	ENSG00000129083.13	ENST00000249923.7	3481	22	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_21	110.629860283716	1390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAATGGATTTCTTTTAG	0	True	NA	-9	True	AATAAA	-23	NA	14499852	14457505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499608
transcript_2168.known	chr1	+	997	2	FSM	ENSG00000249087.8	ENST00000454117.2	1266	2	269	0	-5	0	multi-exon	FALSE	canonical	3	19	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTTGATGTGTGTAAT	1	True	NA	73	True	TTTAAA	-2	NA	23369217	23371839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369514_23371138
transcript_21681.nic	chr11	-	3366	22	NIC	ENSG00000129083.13	novel	3336	22	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_21	96.8432588260296	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	8684	False	NA	-15	True	AATAAA	-17	NA	14499876	14457511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_21686.known	chr11	-	1584	12	FSM	ENSG00000129083.13	ENST00000534234.5	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_11	100.995785854315	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTACTTTAGTAAATG	0	True	NA	NA	False	NA	NA	NA	14499811	14476916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_2169.known	chr1	+	2547	1	FSM	ENSG00000249087.8	ENST00000335648.3	2547	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAATTGTCATAGTTTT	19	True	NA	16	True	AATAAA	-22	NA	23369235	23371782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369200_23371800
transcript_21691.known	chr11	-	3336	22	FSM	ENSG00000129083.13	ENST00000439561.7	3336	22	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_21	68.5896139906932	1860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	0	True	NA	-15	True	AATAAA	-17	NA	14499811	14457511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_21696.nnic	chr11	-	2384	6	NNC	ENSG00000186104.11	novel	1746	6	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	22.3571017799714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	528	False	NA	NA	False	AATAAA	-24	NA	14891700	14878008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14890431_14890470_14890748
transcript_217.known	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	1408	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4003_4081_6057
transcript_2170.known	chr1	+	376	2	ISM	ENSG00000249087.8	ENST00000518600.2	483	3	1921	0	1906	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	1927	False	NA	17	True	AATAAA	-23	NA	23371143	23371783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_23371210_23371473
transcript_21704.known	chr11	-	1668	5	FSM	ENSG00000186104.11	ENST00000534686.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	19.8667435680838	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	3	True	NA	NA	False	AATAAA	-24	NA	14891662	14878008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14878298_14879113_14879208_14880135_14880769_14885775_14885918_14891152
transcript_2171.known	chr1	-	1719	11	FSM	ENSG00000204219.11	ENST00000450454.7	1719	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.06594194335118	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATACACCATTTGGCT	-19	True	NA	NA	False	NA	NA	NA	23424748	23380908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23381475_23384345_23384418_23387272_23387420_23393878_23394034_23397544_23397602_23397791_23397956_23408663_23408727_23417248_23417391_23417903_23418010_23419076_23419140_23424564
transcript_21711.nic	chr11	-	3169	5	NIC	ENSG00000186104.11	novel	1882	5	NA	NA	25	0	intron_retention	FALSE	canonical	3	17	junction_4	17.6847391838274	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	22	False	NA	NA	False	AATAAA	-24	NA	14892206	14878008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14890431
transcript_21712.known	chr11	-	1882	5	FSM	ENSG00000186104.11	ENST00000530609.5	1882	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	14.9059551857638	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	588	False	NA	NA	False	AATAAA	-24	NA	14891640	14878008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891152
transcript_21715.known	chr11	-	2214	5	FSM	ENSG00000186104.11	ENST00000334636.10	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	22.599778759979	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGCTATTGAATCTTT	-3	True	NA	NA	False	AATATA	-18	NA	14892231	14877439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891980
transcript_21721.nic	chr11	-	1069	4	NIC	ENSG00000186104.11	novel	1668	5	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	24.0046291831851	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	532	False	NA	NA	False	AATAAA	-24	NA	14891696	14878008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14878298_14879113_14879208_14885775_14885918_14891152
transcript_21730.known	chr11	-	446	3	FSM	ENSG00000186104.11	ENST00000525015.1	446	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	28.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACACAGATGTGTCT	6387	False	NA	NA	False	AATAAA	-21	NA	14885841	14878011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14878298_14879113_14879208_14885775
transcript_21731.known	chr11	-	1746	6	FSM	ENSG00000186104.11	ENST00000532378.5	1746	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	25.2792404949199	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGTCACAGCATCAA	14	True	NA	NA	False	NA	NA	NA	14891651	14878037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14878298_14879113_14879444_14880135_14880360_14885775_14885918_14890431_14890470_14890899
transcript_21732.known	chr11	+	1044	5	FSM	ENSG00000175868.14	ENST00000324229.11	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1.92028643696715	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	-1	True	NA	10	True	AATAAA	-20	NA	15073592	15078637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15078082
transcript_21733.nnic	chr11	+	1001	4	NIC	ENSG00000175868.14	novel	1044	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	27.3901847788988	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	NA	False	NA	10	True	AATAAA	-20	NA	15073540	15078637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_15073664_15075060_15075199_15077285_15077471_15078082
transcript_21734.known	chr11	-	916	5	FSM	ENSG00000110680.13	ENST00000361010.7	916	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.78535710713571	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATCTCTGCTGCTATT	63	False	NA	NA	False	ATTAAA	-23	NA	14972286	14966668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14967102_14967673_14967855_14969934_14970076_14971106_14971202_14972220
transcript_21735.nic	chr11	-	1052	5	NIC	ENSG00000110680.13	novel	851	4	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	1.58113883008419	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCTCTGCTGCTATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	14972445	14966667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14967102_14967673_14967855_14969934_14970076_14971106_14971202_14972244
transcript_21746.nnic	chr11	+	1099	4	NIC	ENSG00000254946.2	novel	743	3	NA	NA	-356	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	12.3558353285671	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGGAAGGAATGGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	15552498	15604169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_15552914_15561877_15562229_15585707_15585803_15603931
transcript_2175.known	chr1	-	4051	25	FSM	ENSG00000088280.20	ENST00000336689.8	4051	25	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_8	26.5295629125949	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGGTTTCATTTATGT	27	True	NA	-7	True	AATAAA	-18	NA	23484179	23428562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23429931_23431034_23431126_23431695_23431919_23433076_23433273_23433424_23433533_23433625_23433694_23434253_23434370_23434532_23434619_23435850_23436029_23436559_23436655_23436910_23437045_23437129_23437321_23437423_23437473_23438746_23438835_23439160_23439231_23441101_23441212_23441386_23441474_23441654_23441731_23442185_23442272_23442500_23442613_23451478_23451529_23452696_23452772_23455880_23456027_23456121_23456195_23484004
transcript_21755.known	chr11	-	465	2	FSM	ENSG00000254789.4	ENST00000533082.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGCTTCCCCTTAC	20	False	NA	NA	False	NA	NA	NA	15622391	15572022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_15572401_15622304
transcript_21756.known	chr11	+	743	3	FSM	ENSG00000254946.2	ENST00000659618.1	743	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	11	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGGAAGGAATGGTTA	-2	True	NA	NA	False	AATAAA	-20	NA	15561818	15604169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_15562229_15585707_15585803_15603931
transcript_21775.known	chr11	+	405	4	FSM	ENSG00000110696.10	ENST00000524439.5	405	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1232.76933050033	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGATGATGACGATGA	-6	True	NA	NA	False	NA	NA	NA	16738643	16754906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_16738842_16748096_16748158_16752784_16752895_16754870
transcript_21777.known	chr11	+	3920	5	FSM	ENSG00000110696.10	ENST00000228136.9	3920	5	0	0	0	0	multi-exon	FALSE	canonical	3	2521	junction_3	127.779839959205	9752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTGCCCATTACC	-3	True	NA	20	True	AGTAAA	-17	NA	16738646	16758340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_16738842_16744600_16744685_16748096_16748158_16752784_16752895_16754870
transcript_21778.known	chr11	+	762	3	FSM	ENSG00000110696.10	ENST00000525256.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	2526	junction_2	150	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTAGCCTGGTGTGGTG	9	True	NA	NA	False	ACTAAA	-16	NA	16738658	16748591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_16738842_16744600_16744685_16748096
transcript_21779.known	chr11	+	575	4	FSM	ENSG00000110696.10	ENST00000525684.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1290.31710142206	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAAATGATGTTTGTTA	8	True	NA	-65	True	AAAAAG	-14	NA	16738657	16755067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_16738842_16744600_16744685_16752784_16752895_16754870
transcript_21784.known	chr11	-	321	1	FSM	ENSG00000244398.1	ENST00000459748.1	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATTATGAA	27	False	NA	-67	True	NA	NA	NA	16975013	16974692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_16974700_16975000
transcript_21790.known	chr11	+	1290	2	FSM	ENSG00000184669.10	ENST00000530490.3	1332	2	0	42	0	-25	multi-exon	FALSE	canonical	3	46	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTGCGGCGCCTGCA	15	False	NA	NA	False	ATTAAA	-1	NA	17013997	17052951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17014368_17052031
transcript_21808.known	chr11	-	561	6	FSM	ENSG00000110700.7	ENST00000526895.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	6260.93088925281	35874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	-15	True	AATAAA	-19	NA	17077706	17074388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077474_17077618
transcript_21809.known	chr11	-	491	6	FSM	ENSG00000110700.7	ENST00000228140.6	491	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	5976.52081398534	4913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	3	True	NA	-15	True	AATAAA	-19	NA	17077666	17074388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17074467_17075096_17075164_17075453_17075624_17077167_17077247_17077428_17077478_17077618
transcript_2181.known	chr1	-	950	3	FSM	ENSG00000117318.9	ENST00000374561.6	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	4024	junction_1	56.5	14679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGACACCCGTCTCCA	-1	True	NA	-19	True	AATAAA	-22	NA	23559501	23557925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23558416_23558934_23559020_23559126
transcript_21810.known	chr11	-	664	5	FSM	ENSG00000110700.7	ENST00000525828.1	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	11387	junction_1	2145.8143413399	12740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTTTCATATTTA	1	True	NA	-19	True	AATAAA	-15	NA	17077668	17074392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428
transcript_21811.known	chr11	-	746	3	FSM	ENSG00000110700.7	ENST00000531908.5	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	11387	junction_1	2555	6520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	1649	False	NA	-15	True	AATAAA	-19	NA	17076020	17074388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17074467_17075096_17075198_17075453
transcript_21812.known	chr11	-	583	2	FSM	ENSG00000110700.7	ENST00000528074.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	13351	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGAAGCAGAGGCACAC	-9	True	NA	NA	False	AATAAA	-29	NA	17077678	17076954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17077478_17077618
transcript_21818.known	chr11	-	584	3	FSM	ENSG00000011405.14	ENST00000532035.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATTTTAGACCTACTAT	17	True	NA	NA	False	NA	NA	NA	17207950	17169351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17169807_17194388_17194415_17207847
transcript_2182.known	chr1	-	623	2	FSM	ENSG00000117318.9	ENST00000463312.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	4024	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGTATATGATGACACC	766	False	NA	-27	True	AATAAA	-14	NA	23559075	23557933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23558416_23558934
transcript_21823.nnic	chr11	-	1119	8	Fusion	ENSG00000011405.14_ENSG00000110700.7	novel	527	6	NA	NA	13481	0	multi-exon	FALSE	non_canonical	0	0	junction_6	6872.41624027473	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	-15	True	AATAAA	-19	NA	17194439	17074388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077629_17193443_17193557_17193920
transcript_21827.nnic	chr11	-	1130	8	Fusion	ENSG00000011405.14_ENSG00000110700.7	novel	527	6	NA	NA	13481	0	multi-exon	FALSE	non_canonical	0	0	junction_6	6872.41624027473	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	-15	True	AATAAA	-19	NA	17194439	17074388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077646_17193449_17193557_17193920
transcript_21833.nnic	chr11	-	1258	8	Fusion	ENSG00000011405.14_ENSG00000110700.7	novel	561	6	NA	NA	13481	0	multi-exon	FALSE	non_canonical	0	0	junction_6	6872.41624027473	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	-15	True	AATAAA	-19	NA	17194439	17074388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077737_17193412_17193557_17193920
transcript_21835.nnic	chr11	-	1267	8	Fusion	ENSG00000011405.14_ENSG00000110700.7	novel	561	6	NA	NA	13481	0	multi-exon	FALSE	non_canonical	0	0	junction_6	6872.41624027473	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	-15	True	AATAAA	-19	NA	17194439	17074388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077757_17193423_17193557_17193920
transcript_21840.nnic	chr11	-	1270	8	Fusion	ENSG00000011405.14_ENSG00000110700.7	novel	561	6	NA	NA	13481	0	multi-exon	FALSE	non_canonical	0	0	junction_6	6872.41624027473	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	-15	True	AATAAA	-19	NA	17194439	17074388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077781_17193444_17193557_17193920
transcript_21851.nic	chr11	+	1653	14	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-13	1	combination_of_known_junctions	TRUE	canonical	3	19	junction_1	108.257199768769	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	-11	True	NA	NA	False	AATAAA	-14	NA	17276717	17331523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_17276849_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_21854.nic	chr11	+	1652	14	NIC	ENSG00000070081.18	novel	937	8	NA	NA	-18	1	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	110.257149669554	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	165	False	NA	NA	False	AATAAA	-14	NA	17276965	17331523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_17277096_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_21868.known	chr11	+	1905	13	FSM	ENSG00000070081.18	ENST00000323688.10	1905	13	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_7	37.4265948223987	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTTTTTTCCAACA	12	True	NA	NA	False	AATAAA	-24	NA	17276740	17331390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901
transcript_21869.known	chr11	+	937	8	FSM	ENSG00000070081.18	ENST00000529313.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	188.253194677069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAAGAAAAGAGAAAAGAA	4	True	NA	66	True	TTTAAA	-9	NA	17276983	17310927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17277096_17282788_17282944_17286633_17286718_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824
transcript_21870.known	chr11	+	1369	12	ISM	ENSG00000070081.18	ENST00000529010.6	2300	14	18583	688	-15598	1	3prime_fragment	FALSE	canonical	3	331	junction_5	37.8924096719093	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	17295321	17331523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_21871.known	chr11	+	472	2	FSM	ENSG00000287898.1	ENST00000666786.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTCATGGAGTTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	17476930	17492367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17477055_17492019
transcript_21872.known	chr11	-	2159	20	FSM	ENSG00000006611.17	ENST00000527020.5	2159	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.07072676753996	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATAGGAGTGAGTGTGG	19	False	NA	-4	True	AATAAA	-17	NA	17544400	17493899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17517400_17517475_17520869_17520995_17521345_17521412_17522783_17522927_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_21873.nic	chr11	-	1020	4	ISM	ENSG00000006611.17	ENST00000005226.12	3241	27	-13	36743	-13	-7760	5prime_fragment	FALSE	canonical	2	5	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTCTACCTCGTCAGG	-10	True	NA	NA	False	TATAAA	-15	NA	17544429	17530642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_17531293_17531398_17531543_17533254_17533323_17544271
transcript_21874.known	chr11	-	2232	21	FSM	ENSG00000006611.17	ENST00000318024.9	2232	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	3.01827765455731	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATAGGAGTGAGTGTGG	3	True	NA	-4	True	AATAAA	-17	NA	17544416	17493899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17517400_17517475_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_21887.known	chr11	-	1525	12	FSM	ENSG00000129158.11	ENST00000525422.5	1525	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	63.0278699996614	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-8	True	NA	-8	True	AATAAA	-20	NA	18013036	17788047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17788414_17878207_17878245_17918694_17918780_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_21904.nic	chr11	-	1467	11	NIC	ENSG00000129158.11	novel	1451	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_10	35.4639253326532	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	8078	False	NA	-8	True	AATAAA	-20	NA	18012963	17788047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_21905.known	chr11	-	1451	11	FSM	ENSG00000129158.11	ENST00000265965.10	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	35.4639253326532	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-19	True	NA	-8	True	AATAAA	-20	NA	18013047	17788047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_21908.known	chr11	-	1314	11	FSM	ENSG00000129158.11	ENST00000527494.5	1314	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	63.8357266740185	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	23	True	NA	-8	True	AATAAA	-20	NA	18012898	17788047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_17999493_17999573_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_21925.nic	chr11	-	1300	10	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	41.5222683078863	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	8078	False	NA	-8	True	AATAAA	-20	NA	18012963	17788047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_21926.known	chr11	-	1264	10	FSM	ENSG00000129158.11	ENST00000528200.5	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	41.5222683078863	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCCCAGAGAATTGTT	0	True	NA	-9	True	AATAAA	-19	NA	18013028	17788048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_2194.known	chr1	+	823	6	FSM	ENSG00000142676.14	ENST00000467075.2	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	4661.59318688364	64369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	20	False	NA	23	True	AATAAA	-23	NA	23691820	23696425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23692061_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_21951.known	chr11	-	1526	12	FSM	ENSG00000166788.10	ENST00000531581.5	1526	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	161.166768512393	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGAAATTGACTTATTG	-19	True	NA	-9	True	AATAAA	-19	NA	18106087	18080344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18080492_18081410_18081504_18083534_18083729_18086861_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_21963.known	chr11	-	451	5	FSM	ENSG00000166788.10	ENST00000532452.5	451	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	241.354899473783	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAGTTGAAATTGACTT	49	False	NA	-13	True	AATAAA	-15	NA	18106019	18080348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18080492_18081410_18081504_18083534_18083547_18103256_18103347_18105906
transcript_21965.known	chr11	-	1573	12	FSM	ENSG00000166788.10	ENST00000524803.6	1573	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	161.429666387819	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGTGTTAACATTTT	-14	True	NA	2	True	ACTAAA	-19	NA	18106082	18080291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18080492_18081410_18081504_18083534_18083732_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_21966.known	chr11	-	471	2	FSM	ENSG00000166788.10	ENST00000530237.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTTGAAATTGACTTA	NA	False	NA	-12	True	AATAAA	-16	NA	18081737	18080347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18080492_18081410
transcript_21967.known	chr11	+	1110	1	FSM	ENSG00000212789.4	ENST00000526214.1	1110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCTTCTGATAAATAAAG	85	False	NA	NA	False	AGTAAA	-31	NA	18261981	18263091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18262000_18263100
transcript_21968.known	chr11	+	518	4	FSM	ENSG00000173432.13	ENST00000356524.9	518	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGAAACTGGGTGTTA	1	True	NA	NA	False	AATAAA	-17	NA	18266263	18269967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18266297_18266883_18266979_18269194_18269334_18269716
transcript_21969.known	chr11	-	4725	22	FSM	ENSG00000110756.18	ENST00000396253.7	4725	22	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_21	15.6001627993133	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTTGCATTTATAAC	278	False	NA	2	True	AGTAAA	-26	NA	18322174	18278667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18321945
transcript_21976.known	chr11	-	2160	11	FSM	ENSG00000110756.18	ENST00000531848.1	2160	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	25.7062249270483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATTTTGTTTCTTTTTT	2	True	NA	NA	False	ATTAAA	-16	NA	18322198	18296161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18322076
transcript_21979.known	chr11	+	3012	15	FSM	ENSG00000110768.12	ENST00000265963.9	3012	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_14	22.1899269296421	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGGTTTCTCATT	-4	True	NA	34	True	AGTAAA	-30	NA	18322566	18367045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_2198.known	chr1	+	879	5	FSM	ENSG00000142676.14	ENST00000458455.2	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	6685	junction_4	2295.02585769747	64013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTCTGTTGTGTGT	505	False	NA	16	True	AATAAA	-45	NA	23692305	23696418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_21985.nnic	chr11	+	2138	12	NNC	ENSG00000110768.12	novel	1822	14	NA	NA	-35	4433	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_11	41.6911112868268	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTATTTTATCACTGCGG	-28	True	NA	6	True	AATAAA	-3	NA	18322259	18353264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18352882
transcript_21988.nic	chr11	+	2588	11	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-297	7492	-35	4447	5prime_fragment	FALSE	canonical	3	112	junction_5	17.5011428198275	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCGGCTTGAAAACCTTCA	-28	True	NA	20	True	AATAAA	-17	NA	18322259	18353278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328
transcript_21991.nic	chr11	+	2461	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-297	11939	-35	0	5prime_fragment	FALSE	canonical	3	112	junction_5	17.6984286025624	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAATTTCTTTCATTTA	-28	True	NA	3	True	AATAAA	-15	NA	18322259	18348831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
transcript_21992.nic	chr11	+	1517	7	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-297	18979	-35	-167	5prime_fragment	FALSE	canonical	3	112	junction_5	19.8578280114753	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTCCTGTGTGAGTTG	-28	True	NA	NA	False	ATTAAA	-16	NA	18322259	18341791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527
transcript_21998.nic	chr11	+	1058	4	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-297	22447	-35	2419	5prime_fragment	FALSE	canonical	3	147	junction_1	6.18241233033047	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTCTTAAGACCATTA	-28	True	NA	NA	False	AATAAA	-15	NA	18322259	18338323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108
transcript_22.known	ERCC-00053	+	1007	1	FSM	ERCC-00053A	DQ516785	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00053_+_0_1000
transcript_22001.known	chr11	+	568	2	FSM	ENSG00000110768.12	ENST00000526461.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACACACTTTAAGAGTTG	-3	True	NA	NA	False	NA	NA	NA	18322567	18333454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18322741_18333059
transcript_22002.known	chr11	+	575	4	FSM	ENSG00000110768.12	ENST00000531757.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	66.7149824918578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCAAGAGGAAAGCAAATA	-3	True	NA	NA	False	AGTAAA	-28	NA	18322546	18335904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18322741_18324235_18324297_18333059_18333229_18335753
transcript_22003.known	chr11	+	2707	16	FSM	ENSG00000110768.12	ENST00000453096.6	2707	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	45.7317783992221	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGAGGTTTTTTGGTTGTC	7	True	NA	15	True	ATTAAA	-32	NA	18322294	18366261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18322741_18325946_18326154_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_22004.known	chr11	+	1922	8	FSM	ENSG00000134333.14	ENST00000379412.9	1922	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1449.11992996735	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGGTTAATTCATTA	1683	False	NA	29	True	AATAAA	-14	NA	18396277	18407847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18396611_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_22006.known	chr11	+	2241	8	FSM	ENSG00000134333.14	ENST00000422447.8	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	3357	junction_1	385.985724595919	2590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGGCCTGAAAACCATAC	-1	True	NA	NA	False	AATACA	-14	NA	18394562	18408425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18394637_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_22007.known	chr11	+	656	2	FSM	ENSG00000134333.14	ENST00000469976.2	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	3357	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTATCAATTATGGAGCT	-3	True	NA	NA	False	NA	NA	NA	18394560	18397398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18394637_18396818
transcript_22008.known	chr11	+	2035	8	FSM	ENSG00000166796.12	ENST00000541669.6	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	5.34522483824849	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATTTGGTGTCTCAA	-14	True	NA	NA	False	TATAAA	-7	NA	18412317	18452063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18412409_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_22010.known	chr11	+	1256	8	FSM	ENSG00000166796.12	ENST00000280704.8	1256	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.2566769979926	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	-1	True	NA	NA	False	AATAAA	-18	NA	18412330	18451243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18412463_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_22011.nic	chr11	+	1128	7	NIC	ENSG00000166796.12	novel	2035	8	NA	NA	-34	3	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	6.58280588604383	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTCTAGTCTCTCAAG	-2	True	NA	NA	False	AATAAA	-21	NA	18412283	18451246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_18412409_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18450962
transcript_22013.known	chr11	+	1092	7	FSM	ENSG00000166796.12	ENST00000396215.7	1092	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.06320670013903	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	-9	True	NA	NA	False	AATAAA	-18	NA	18412322	18451243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18412409_18412708_18412844_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_22019.nic	chr11	+	1007	6	NIC	ENSG00000166796.12	novel	2035	8	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	7.05974503788912	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	-2	True	NA	NA	False	AATAAA	-18	NA	18412283	18451243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_18412409_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18450962
transcript_2202.known	chr1	+	1017	6	FSM	ENSG00000142676.14	ENST00000643754.2	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	6271	junction_1	2662.79367582244	147120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCAGGTTTCTTTTAC	5	True	NA	NA	False	ATTAAA	-17	NA	23691805	23696835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_22024.known	chr11	+	813	5	FSM	ENSG00000166796.12	ENST00000545848.5	813	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	9.41740410091868	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	28	True	NA	NA	False	AATAAA	-18	NA	18412359	18451243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18412409_18412708_18412844_18429736_18429911_18434739_18434914_18450962
transcript_22026.nic	chr11	+	471	3	ISM	ENSG00000166796.12	ENST00000541669.6	2035	8	-34	36669	-34	-35733	5prime_fragment	FALSE	canonical	3	14	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCATGCCATTGGGCCAT	-2	True	NA	NA	False	AATAAA	-41	NA	18412283	18415394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18412409_18412708_18412844_18415183
transcript_2203.known	chr1	+	1600	5	FSM	ENSG00000142676.14	ENST00000443624.6	1600	5	0	0	0	0	multi-exon	FALSE	canonical	3	6271	junction_1	2911.61488696565	4909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATGTGCAATTCTGTT	5	True	NA	10	True	AATAAA	-39	NA	23691805	23696412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23695909_23696343
transcript_22038.known	chr11	-	1534	10	FSM	ENSG00000074319.13	ENST00000251968.4	1534	10	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	32.6330136556052	3068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-26	True	NA	-15	True	AATAAA	-14	NA	18526942	18480310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
transcript_22039.known	chr11	-	391	4	FSM	ENSG00000074319.13	ENST00000544804.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	350.287818166084	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTACCCTTGAAAACTTG	35	True	NA	NA	False	NA	NA	NA	18526881	18502484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18502578_18506856_18506924_18509541_18509666_18526774
transcript_2204.known	chr1	+	539	4	FSM	ENSG00000142676.14	ENST00000482370.2	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	10774	junction_3	718.406260799247	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGGTGAATGGAGTTGG	808	False	NA	NA	False	NA	NA	NA	23692608	23695946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797
transcript_22043.known	chr11	-	4207	12	FSM	ENSG00000151116.17	ENST00000396197.8	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	8.86258735051196	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGATGCTTCATTTAT	0	True	NA	-2	True	AATAAA	-16	NA	18588734	18529608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_22045.known	chr11	-	2503	11	FSM	ENSG00000151116.17	ENST00000543987.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	16.7275222313408	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTATTAAGGGGCACTT	NA	False	NA	NA	False	TATAAA	-31	NA	18588746	18531200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_22046.nic	chr11	-	2054	11	NIC	ENSG00000151116.17	novel	4207	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	16.8	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCATAACCTCTTCCTG	0	True	NA	20	True	ATTAAA	-39	NA	18588734	18531676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18588612
transcript_22047.known	chr11	-	1848	11	FSM	ENSG00000151116.17	ENST00000379387.8	1848	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	16.4404987758888	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTAATGTTTCTTGTG	6	True	NA	NA	False	NA	NA	NA	18588706	18531873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
transcript_22048.known	chr11	-	1354	11	FSM	ENSG00000151116.17	ENST00000396196.6	1354	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	16.4258941917936	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAAGTCATTTAATTTT	-5	True	NA	NA	False	NA	NA	NA	18588717	18532280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18575346_18575413_18578723_18578809_18588612
transcript_22052.known	chr11	-	1799	10	FSM	ENSG00000151116.17	ENST00000320750.10	1799	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21.9634938415634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTTACATGCACTTTA	-7	True	NA	-82	True	NA	NA	NA	18588686	18531778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
transcript_22061.known	chr11	-	995	7	FSM	ENSG00000151116.17	ENST00000300038.7	995	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	19.6079632349263	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGTTTTCTCATCTG	-2	True	NA	-3	True	AATAAA	-21	NA	18588681	18563645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18564002_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_22063.nnic	chr11	-	1026	7	NNC	ENSG00000151116.17	novel	995	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	24.7885502242915	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGTTTTCTCATCTG	NA	False	NA	-3	True	AATAAA	-21	NA	18588749	18563645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_18564002_18564891_18565011_18566383_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_2207.known	chr1	+	2671	11	FSM	ENSG00000011007.13	ENST00000613537.5	4838	11	1	2166	1	-2130	multi-exon	FALSE	canonical	3	368	junction_10	27.258026340878	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATTATCCCCCA	-9	True	NA	11	True	AATAAA	-15	NA	23743471	23759893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_22073.known	chr11	-	724	4	FSM	ENSG00000151116.17	ENST00000535340.5	724	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTATTACAGATTTTTA	7	True	NA	NA	False	NA	NA	NA	18588705	18569897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18570378_18575346_18575413_18578723_18578809_18588612
transcript_22077.nic	chr11	-	993	3	ISM	ENSG00000151116.17	ENST00000535340.5	724	4	-44	4744	-2	-4297	5prime_fragment	FALSE	canonical	3	55	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATCACTGACTTTTCTTA	NA	False	NA	NA	False	AATAAA	-7	NA	18588749	18574641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_18575413_18578723_18578809_18588612
transcript_22078.known	chr11	-	5601	6	FSM	ENSG00000179119.15	ENST00000336349.6	5601	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	8.11418511004032	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCTGGTTTGCATT	1	True	NA	-7	True	ATTAAA	-14	NA	18634342	18606402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634197
transcript_22081.nnic	chr11	+	476	4	NIC	ENSG00000247595.5	novel	493	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	10.6144555520604	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATATTTTATGTTA	-30	True	NA	26	True	CATAAA	-15	NA	18588758	18603883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_18588996_18601091_18601181_18603157_18603196_18603771
transcript_22083.nnic	chr11	+	398	3	NIC	ENSG00000247595.5	novel	493	4	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATATTTTATGTTA	737	False	NA	26	True	CATAAA	-15	NA	18588747	18603883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_18588996_18603157_18603196_18603771
transcript_22086.nic	chr11	-	384	2	ISM	ENSG00000179119.15	ENST00000536336.5	2167	4	-77	4710	-77	-1102	5prime_fragment	FALSE	canonical	3	75	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATCTATAGCCTTAT	3	True	NA	NA	False	NA	NA	NA	18634466	18616874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_18616990_18634197
transcript_22088.known	chr11	+	3607	3	FSM	ENSG00000151117.9	ENST00000280734.3	3607	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGGTAGCTTACTA	0	True	NA	NA	False	TATAAA	-18	NA	18698778	18704785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18698908_18700932_18701198_18701572
transcript_22089.known	chr11	-	3091	15	FSM	ENSG00000110786.18	ENST00000358540.7	3091	15	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_14	17.9636821824207	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGGTCTGTGTGATT	-13	True	NA	-1	True	AATAAA	-24	NA	18791798	18727927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772072_18791524
transcript_22095.known	chr11	+	2406	17	FSM	ENSG00000177054.14	ENST00000446113.7	2406	17	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	61.416832739486	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	13	True	NA	13	True	AATAAA	-16	NA	19117167	19176415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_221.known	SIRV3	+	2018	3	FSM	SIRV3A	SIRV303	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	2103	junction_1	469	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4568_4780_6057
transcript_22111.known	chr11	+	2283	16	FSM	ENSG00000177054.14	ENST00000399351.7	2283	16	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	75.8335604392204	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	-10	True	NA	13	True	AATAAA	-16	NA	19117144	19176415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_22138.known	chr11	-	3706	13	FSM	ENSG00000129173.13	ENST00000250024.9	3706	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	9.02273363356263	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	7	True	NA	NA	False	ATTAAA	-17	NA	19240945	19224062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19240547
transcript_22139.known	chr11	-	3432	13	FSM	ENSG00000129173.13	ENST00000527884.5	3432	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	9.90335240657874	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	1	True	NA	NA	False	ATTAAA	-17	NA	19241620	19224062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
transcript_22142.nic	chr11	-	930	5	ISM	ENSG00000129173.13	ENST00000527884.5	3432	13	-61	10811	-61	2473	5prime_fragment	FALSE	canonical	3	24	junction_4	13.2098448136229	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGAGCAAGAGTTTGA	NA	False	NA	NA	False	AAAAAG	-4	NA	19241681	19234873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
transcript_22146.nnic	chr11	+	1138	3	NNC	ENSG00000166833.23	novel	10667	38	NA	NA	-657	11170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTAATTTGCTTCT	NA	False	NA	NA	False	NA	NA	NA	19777144	19843771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_19777264_19832483_19832602_19842870
transcript_22148.nic	chr11	+	1291	3	ISM	ENSG00000166833.23	ENST00000534229.1	684	5	-91	36356	-91	11170	5prime_fragment	FALSE	canonical	2	10	junction_1	9	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCTTAATTTGCTTCT	278	False	NA	NA	False	NA	NA	NA	19777710	19843771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_19777983_19832483_19832602_19842870
transcript_22150.nic	chr11	+	1624	2	ISM	ENSG00000166833.23	ENST00000530408.1	556	5	91	7606	91	-7606	internal_fragment	FALSE	canonical	3	16	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATCAGAGTGTGGGAG	87	False	NA	NA	False	AAAAAG	-1	NA	20022935	20037385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_20023133_20035958
transcript_22151.nnic	chr11	+	588	3	Antisense	novelGene_ENSG00000109851.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTATCATTTCAGTGGC	NA	False	NA	NA	False	AATAAA	-41	NA	20156798	20157621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_20156976_20157051_20157209_20157367
transcript_22155.known	chr11	+	886	6	FSM	ENSG00000109854.14	ENST00000421577.6	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	120.980990242269	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGATGGTGCTCTGCA	-18	True	NA	-90	True	NA	NA	NA	20363722	20383334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20363750_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_22158.known	chr11	+	967	6	FSM	ENSG00000109854.14	ENST00000443524.6	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	132.495131986047	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTATACATATAGATC	-16	True	NA	-56	True	AAGAAA	-30	NA	20363724	20383368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20363799_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_22162.known	chr11	+	1477	6	FSM	ENSG00000109854.14	ENST00000419348.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	78.3239426995347	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	2	True	NA	18	True	AATAAA	-26	NA	20363742	20383782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20363913_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_22165.known	chr11	+	713	3	FSM	ENSG00000109854.14	ENST00000530266.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	160	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTAATAAATGTTTG	NA	False	NA	-1	True	AGTAAA	-36	NA	20363684	20367625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20363750_20364236_20364433_20367173
transcript_22167.known	chr11	+	774	2	FSM	ENSG00000109854.14	ENST00000532081.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTCTCACTTGAGTG	-25	True	NA	29	True	AATAAA	-17	NA	20364140	20367655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20364433_20367173
transcript_22170.known	chr11	+	2552	16	FSM	ENSG00000185238.13	ENST00000331079.11	2552	16	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	32.2981939639562	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTCAACAGGGTA	-1	True	NA	80	True	AATAAA	-19	NA	20387715	20509338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20387775_20388018_20388155_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_22175.known	chr11	+	2530	15	FSM	ENSG00000185238.13	ENST00000330796.9	2530	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	86.3912847550762	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATATTATAAAAGTTTTC	-14	True	NA	36	True	AATAAA	-43	NA	20387557	20509294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20387775_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_22176.known	chr11	+	1736	14	FSM	ENSG00000185238.13	ENST00000437750.2	1736	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	117.956064431188	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATTTGGAAGAGAGAT	-1	True	NA	NA	False	NA	NA	NA	20387715	20508708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20387775_20389743_20389827_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_22178.nic	chr11	+	724	3	ISM	ENSG00000185238.13	ENST00000331079.11	2552	16	-109	119175	-33	-2088	5prime_fragment	FALSE	canonical	3	296	junction_1	12.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGAAATATAAGTTCAG	35	True	NA	NA	False	NA	NA	NA	20387606	20390163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_20387775_20388018_20388155_20389743
transcript_22179.known	chr11	+	1942	12	FSM	ENSG00000171714.13	ENST00000683834.1	1942	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	6.18315493568435	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGACATTGAAATGAT	37	False	NA	NA	False	TATAAA	-1	NA	22193247	22255932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_22193533_22203803_22203851_22211266_22211315_22221096_22221211_22225983_22226053_22227301_22227587_22236162_22236277_22239568_22239685_22250236_22250372_22250740_22250847_22250950_22251012_22255370
transcript_22180.known	chr11	+	749	4	FSM	ENSG00000171714.13	ENST00000683897.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	8.28653526310404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTTCTTCCAAGTA	8	False	NA	NA	False	NA	NA	NA	22193206	22221421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_22193533_22203803_22203851_22211263_22211315_22221096
transcript_22181.known	chr11	+	4555	4	FSM	ENSG00000171714.13	ENST00000684365.1	4555	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.9848380355227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTTTAACTCAATAAAAA	19	True	NA	NA	False	NA	NA	NA	22193078	22225102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_22193533_22203803_22203851_22211266_22211315_22221096
transcript_22182.nnic	chr11	-	1218	3	Antisense	novelGene_ENSG00000171714.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAAAATCTTTGCCATCC	NA	False	NA	NA	False	AAAACA	-33	NA	21982690	21941704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_21942676_21942855_21942939_21982526
transcript_22188.known	chr11	+	895	1	FSM	ENSG00000148935.12	ENST00000648096.1	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGGAACAAAATTTTAC	303	False	NA	NA	False	AATAAA	-23	NA	22625508	22626403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_22625500_22626400
transcript_22189.nnic	chr11	+	1559	2	NNC	ENSG00000246225.7	novel	2800	4	NA	NA	91708	159428	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTTGTATGATAGCGT	NA	False	NA	NA	False	ATTAAA	-6	NA	22921161	23104821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_22921254_23103354
transcript_22192.known	chr11	-	549	4	FSM	ENSG00000198168.9	ENST00000530199.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	119.147900620289	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATGGAACTAAATAG	463	False	NA	33	True	NA	NA	NA	22829373	22822866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829256
transcript_22197.known	chr11	-	4479	4	FSM	ENSG00000198168.9	ENST00000354193.5	4479	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	11.8415464455544	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTGTATGTTTTTGG	0	True	NA	NA	False	AATAAA	-17	NA	22829801	22818926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829694
transcript_22198.known	chr11	-	829	4	FSM	ENSG00000198168.9	ENST00000533774.5	829	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	121.962653664509	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCTGCATCGCGTTAC	265	False	NA	0	True	TATAAA	-19	NA	22829571	22822746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829294
transcript_22204.known	chr11	+	732	6	FSM	ENSG00000255418.6	ENST00000661041.1	732	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.71118469422501	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTAGTTCCTTTGGAATTT	NA	False	NA	NA	False	AATAAA	-5	NA	23154682	23166791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_23154794_23155210_23155404_23163495_23163603_23165189_23165334_23166492_23166614_23166735
transcript_22207.nnic	chr11	+	281	2	NNC	ENSG00000254754.1	novel	348	2	NA	NA	-81596	-2357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCCTCAGAATCCTTTG	NA	False	NA	7	True	AATAAA	-18	NA	25842591	25924451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_25842672_25924250
transcript_22216.known	chr11	-	879	5	FSM	ENSG00000254560.6	ENST00000530430.1	879	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.69740215917033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCTATGCTGGTCCATC	NA	False	NA	NA	False	NA	NA	NA	27220086	27063019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27063061_27066491_27066663_27151049_27151153_27217316_27217481_27219686
transcript_22217.known	chr11	-	583	5	FSM	ENSG00000254560.6	ENST00000525302.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.93700393700591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGCCCTTCTACAACAC	NA	False	NA	NA	False	NA	NA	NA	27220113	27062982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27063061_27066491_27066663_27151049_27151153_27217316_27217481_27220046
transcript_22227.nic	chr11	-	1155	4	NIC	ENSG00000254560.6	novel	471	4	NA	NA	-67	267	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8.60232526704263	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGATCATCAGTGTTTA	NA	False	NA	NA	False	ATTAAA	-8	NA	27220180	27046918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_27047313_27151049_27151153_27217316_27217481_27219686
transcript_22236.nnic	chr11	-	860	4	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-29	80	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	7.25718035235908	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	NA	False	NA	-21	True	ATTAAA	-15	NA	27220142	27217040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_27217481_27218658_27218854_27219686_27219816_27220046
transcript_22239.nnic	chr11	-	1011	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-86	80	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	NA	False	NA	-21	True	ATTAAA	-15	NA	27220199	27217040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_27217481_27218658_27218717_27219686
transcript_22240.nnic	chr11	-	1105	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-43	80	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	NA	False	NA	-21	True	ATTAAA	-15	NA	27220156	27217040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_27217481_27218658_27218854_27219686
transcript_22244.nnic	chr11	-	762	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-126	80	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_1	1	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	NA	False	NA	-21	True	ATTAAA	-15	NA	27220239	27217040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_27217481_27219686_27219816_27220046
transcript_22245.known	chr11	-	745	2	FSM	ENSG00000254560.6	ENST00000531363.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTTCAGCAATTAAACT	NA	False	NA	NA	False	NA	NA	NA	27220102	27217151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27217481_27219686
transcript_22247.known	chr11	-	1452	6	FSM	ENSG00000109881.17	ENST00000328697.11	1452	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	46.2445672484888	2487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTATATTGTTACTAG	7	True	NA	-15	True	AATAAA	-20	NA	27363215	27338511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
transcript_22248.known	chr11	-	2109	3	FSM	ENSG00000109881.17	ENST00000317945.6	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	33.5	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGCAGAACTCTTG	-12	True	NA	NA	False	AATAAA	-19	NA	27363234	27348868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27350440_27357402_27357542_27362835
transcript_22250.known	chr11	-	4842	5	FSM	ENSG00000148943.12	ENST00000278193.7	4842	5	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	66.5187943366384	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTATTTCAAG	2	True	NA	-17	True	CATAAA	-15	NA	27506769	27494417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
transcript_22264.known	chr11	+	1457	2	FSM	ENSG00000245573.9	ENST00000652636.1	1457	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGAGAAAAACTGGCCC	-8	True	NA	NA	False	AATACA	-27	NA	27506839	27541417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_27506899_27540019
transcript_22265.known	chr11	+	376	1	FSM	ENSG00000240036.4	ENST00000476147.2	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTCCAACCAACTGTACA	57	False	NA	NA	False	NA	NA	NA	27581679	27582055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_27581700_27582100
transcript_22276.nnic	chr11	-	907	2	NNC	ENSG00000254934.5	novel	786	3	NA	NA	-185	-11115	at_least_one_novel_splicesite	FALSE	canonical	3	433	junction_1	0	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	913	False	NA	1	True	ATTAAA	-21	NA	27634812	27629107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_27629533_27634330
transcript_22277.known	chr11	-	786	3	FSM	ENSG00000254934.5	ENST00000527083.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	541	2391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	1203	False	NA	-32	True	AATAAA	-16	NA	27634522	27617625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27618024_27623949_27624146_27634330
transcript_22278.known	chr11	-	4340	2	FSM	ENSG00000176697.20	ENST00000314915.6	4340	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	NA	False	NA	-90	True	CATAAA	-2	NA	27722058	27654892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27658586_27721411
transcript_22279.known	chr11	-	3878	2	FSM	ENSG00000176697.20	ENST00000533131.5	3878	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	1959	False	NA	-90	True	CATAAA	-2	NA	27699667	27654892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27658586_27699482
transcript_2228.nic	chr1	+	1354	4	ISM	ENSG00000011007.13	ENST00000609199.2	5075	10	-32	10152	-32	927	5prime_fragment	FALSE	canonical	3	415	junction_1	8.64098759787715	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGAAAACTTCAGCCAC	261	False	NA	-28	True	AAAAAG	-7	NA	23743415	23751871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844
transcript_22280.known	chr11	-	4030	2	FSM	ENSG00000176697.20	ENST00000584049.5	4030	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-7	True	NA	-90	True	CATAAA	-2	NA	27701633	27654892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27658586_27701296
transcript_22281.known	chr11	-	3985	2	FSM	ENSG00000176697.20	ENST00000356660.9	3985	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-1	True	NA	-90	True	CATAAA	-2	NA	27700455	27654892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27658586_27700163
transcript_22282.known	chr11	-	4071	2	FSM	ENSG00000176697.20	ENST00000395981.7	4071	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	1304	False	NA	-90	True	CATAAA	-2	NA	27720723	27654892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27658586_27720345
transcript_22284.known	chr11	-	3918	2	FSM	ENSG00000176697.20	ENST00000530861.5	3918	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	726	False	NA	-90	True	CATAAA	-2	NA	27700900	27654892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27658586_27700675
transcript_22287.known	chr11	-	3417	17	FSM	ENSG00000121621.7	ENST00000263181.7	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_8	29.6750631844315	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTCTTGTCTCATT	-8	True	NA	-4	True	ATTAAA	-19	NA	28108156	28020618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_28021283_28023740_28023851_28035386_28035495_28036216_28036665_28058925_28059162_28062394_28062517_28069258_28069424_28077006_28077170_28082855_28082969_28083168_28083244_28084631_28084809_28088523_28088722_28090616_28090728_28091408_28091514_28094642_28094801_28097622_28097994_28108063
transcript_22297.known	chr11	-	744	2	FSM	ENSG00000121621.7	ENST00000526288.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTTTCTCATAACCT	3	True	NA	NA	False	ATTAAA	-22	NA	28108145	28097331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_28097994_28108063
transcript_223.known	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	5946	junction_1	21.5	6149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1982	1000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_-_1168_1532_1765_1902
transcript_22301.known	chr11	+	4208	7	FSM	ENSG00000169519.21	ENST00000407364.8	4208	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	41.4785754603774	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	2	True	NA	15	True	AATAAA	-16	NA	28108387	28333507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28330395
transcript_22303.known	chr11	+	4304	7	FSM	ENSG00000169519.21	ENST00000406787.7	4304	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	48.824231233636	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	NA	False	NA	15	True	AATAAA	-16	NA	28108247	28333507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296796_28296932_28330395
transcript_22308.known	chr11	+	795	5	FSM	ENSG00000169519.21	ENST00000403099.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	57.9611939145494	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGCAATGTTACAGGT	NA	False	NA	NA	False	NA	NA	NA	28108319	28125587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28123861_28123923_28125509
transcript_22315.known	chr11	+	831	5	FSM	ENSG00000169519.21	ENST00000437814.1	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.045815840906	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTAATTTTGAATATTT	16	True	NA	NA	False	ATTAAA	-20	NA	28110314	28125866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_28110402_28113317_28113605_28122141_28122181_28123861_28123923_28125509
transcript_22318.known	chr11	+	2373	4	FSM	ENSG00000152219.5	ENST00000282032.4	2373	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	41.6439938313104	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTCATTGTTAGCG	-4	True	NA	NA	False	AATAAA	-16	NA	30323103	30338223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_30323203_30330885_30331375_30332865_30332994_30336566
transcript_22319.known	chr11	+	587	2	FSM	ENSG00000152219.5	ENST00000532047.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAATTCTACCATGTAG	25	True	NA	NA	False	NA	NA	NA	30323132	30331402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_30323203_30330885
transcript_2232.known	chr1	-	1074	4	FSM	ENSG00000236810.7	ENST00000427796.6	1112	4	38	0	2	0	multi-exon	FALSE	canonical	3	19	junction_2	7.40870359029762	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGAGTTCTGTGC	-3	True	NA	NA	False	NA	NA	NA	23778287	23760381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23761152_23772110_23772167_23772267_23772427_23778198
transcript_22320.known	chr11	-	1469	8	FSM	ENSG00000066382.17	ENST00000526437.5	1469	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	10.1800124293256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGATAAAAGTCTTA	2668	False	NA	NA	False	NA	NA	NA	30584203	30411180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_30411587_30414227_30414342_30417517_30417634_30495295_30495522_30504735_30504834_30535993_30536176_30580245_30580495_30584125
transcript_22322.known	chr11	-	2562	7	FSM	ENSG00000066382.17	ENST00000358117.10	2562	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	3.85861230093008	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGCTGTTTAGAGGGTT	13	True	NA	-1	True	AATAAA	-18	NA	30586353	30410223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_30411587_30414227_30414342_30417517_30417634_30495295_30495522_30535993_30536176_30580245_30580495_30586041
transcript_22326.known	chr11	+	439	2	FSM	ENSG00000254489.3	ENST00000525871.2	458	2	12	7	12	-7	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGCATTTGCACTTAATT	6	True	NA	NA	False	NA	NA	NA	30584162	30584960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_30584234_30584592
transcript_2233.known	chr1	-	940	4	FSM	ENSG00000236810.7	ENST00000664563.2	970	4	28	2	-6	-2	multi-exon	FALSE	canonical	3	23	junction_2	5.55777733351102	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-12	True	NA	-3	True	ATTAAA	-18	NA	23778296	23760520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23761152_23772110_23772167_23772271_23772427_23778198
transcript_22347.known	chr11	-	795	7	FSM	ENSG00000148950.11	ENST00000278200.5	795	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	120.013425174945	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAGTTGTTTTTAATT	-11	True	NA	-40	True	AATAAA	-14	NA	31509622	31432401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31473723_31473787_31509518
transcript_22358.known	chr11	-	733	6	FSM	ENSG00000148950.11	ENST00000532287.6	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	108.333928203495	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-11	True	NA	-39	True	AATAAA	-15	NA	31509622	31432400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_22398.known	chr11	-	486	5	FSM	ENSG00000148950.11	ENST00000527184.5	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	38.8675635974266	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGGCATACTGCTAATG	19	True	NA	NA	False	NA	NA	NA	31509592	31449029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31449092_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_22401.known	chr11	-	985	5	FSM	ENSG00000148950.11	ENST00000532624.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	31.5158690186388	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACTGCTTTATCAGAAA	6	True	NA	NA	False	NA	NA	NA	31509605	31452544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31453093_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_22409.nic	chr11	-	518	4	NIC	ENSG00000148950.11	novel	733	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	147.060833973186	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-19	True	NA	-39	True	AATAAA	-15	NA	31509630	31432400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_31432569_31433459_31433571_31456259_31456387_31509518
transcript_2241.nnic	chr1	-	842	4	NNC	ENSG00000236810.7	novel	1112	4	NA	NA	2	-91	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	14.8996644257513	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAACATAGCATTACAG	NA	False	NA	-92	True	AATAAA	-17	NA	23778322	23760609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_23761152_23772110_23772167_23772306_23772427_23778198
transcript_22410.known	chr11	-	469	4	FSM	ENSG00000148950.11	ENST00000526776.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	141.563491841019	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-1	True	NA	-39	True	AATAAA	-15	NA	31509574	31432400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31432569_31433459_31433571_31463171_31463306_31509518
transcript_22426.known	chr11	-	314	3	FSM	ENSG00000148950.11	ENST00000533642.1	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_2	63	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTTTTGACTTGATTA	NA	False	NA	-131	True	NA	NA	NA	31509645	31432492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31432569_31433459_31433571_31509518
transcript_22428.known	chr11	-	1067	3	FSM	ENSG00000148950.11	ENST00000528161.5	1067	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACTCCCATGACACCA	48	False	NA	NA	False	NA	NA	NA	31509563	31452197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31453093_31456259_31456387_31509518
transcript_22434.known	chr11	-	735	2	FSM	ENSG00000148950.11	ENST00000532668.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATAGACACCTATATT	3	True	NA	NA	False	AATAAA	-12	NA	31509608	31477114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31477760_31509518
transcript_22435.known	chr11	+	2970	5	FSM	ENSG00000170946.15	ENST00000465995.6	2970	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	26.1055549644132	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTTTCTTTTAC	3	True	NA	NA	False	AATAAA	-15	NA	31369859	31432835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31426286_31426356_31430270
transcript_22436.known	chr11	+	2192	5	FSM	ENSG00000170946.15	ENST00000526042.5	2192	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	42.7492689995981	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAAAACAAGCAT	0	True	NA	NA	False	NA	NA	NA	31369856	31427978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31421971_31422133_31426286
transcript_22437.known	chr11	-	552	6	FSM	ENSG00000148950.11	ENST00000530023.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	38.8453343401753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCATCAGATTTCTTTAA	-21	True	NA	NA	False	NA	NA	NA	31509632	31456292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31456387_31460625_31460715_31463171_31463306_31469739_31469798_31473723_31473787_31509518
transcript_22438.known	chr11	-	475	5	FSM	ENSG00000148950.11	ENST00000529749.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	42.6086845607794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACATTTCAATTAT	8	True	NA	NA	False	TTTAAA	-13	NA	31509603	31456259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31456387_31460625_31460715_31463171_31463306_31469757_31469798_31509518
transcript_22439.known	chr11	-	122	2	FSM	ENSG00000148950.11	ENST00000533921.1	122	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTTTTTTCTGGA	16	True	NA	NA	False	NA	NA	NA	31509595	31488196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31488242_31509518
transcript_22451.nic	chr11	+	1610	10	NIC	ENSG00000109911.19	novel	1961	12	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	55.7861879449752	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAGATTCCTGACAGTG	NA	False	NA	21	True	AATAAA	-19	NA	31509704	31783775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594906_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31783392
transcript_22458.known	chr11	+	2456	2	FSM	ENSG00000109911.19	ENST00000638764.1	2456	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCTAACCCATGTTCT	-5	True	NA	NA	False	ATTAAA	-17	NA	31509766	31512584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31510008_31510369
transcript_22460.known	chr11	+	1700	11	FSM	ENSG00000109911.19	ENST00000379163.10	1700	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	78.5684415016615	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCCTGACAGTGGTCATT	-13	True	NA	27	True	AATAAA	-25	NA	31509758	31783781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603764_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31763410_31763550_31783392
transcript_22461.known	chr11	+	1161	9	FSM	ENSG00000109911.19	ENST00000474374.5	1161	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.6381914796151	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAATTTTTATGTTT	-1	True	NA	NA	False	ATTAAA	-23	NA	31509770	31650221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594906_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114
transcript_22462.known	chr11	+	1392	10	FSM	ENSG00000109911.19	ENST00000640342.1	1392	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.8949851442289	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAACCATAAACAAA	-2	True	NA	NA	False	ATTAAA	-10	NA	31509769	31719703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603764_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31719472
transcript_22464.known	chr11	-	2743	14	FSM	ENSG00000007372.25	ENST00000640368.2	2743	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	3.21976146714713	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTGTTTTGAAGTTGT	3	True	NA	-21	True	ATTAAA	-22	NA	31811322	31789025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31790020_31790709_31790861_31793437_31793554_31793651_31793803_31794031_31794115_31794629_31794789_31800690_31800857_31801560_31801777_31801870_31801913_31802703_31802835_31806401_31806463_31806848_31806926_31810827_31811016_31811114
transcript_22465.known	chr11	-	6944	13	FSM	ENSG00000007372.25	ENST00000643871.1	6944	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_12	3.16227766016838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATGCTACAGTGGG	-6	True	NA	NA	False	AATAAA	-15	NA	31811331	31784791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31790020_31790709_31790861_31793437_31793554_31793651_31793803_31794031_31794115_31794629_31794789_31800690_31800857_31801560_31801777_31802703_31802835_31806401_31806463_31806848_31806926_31810827_31811016_31811114
transcript_22467.known	chr11	+	2369	6	FSM	ENSG00000049449.10	ENST00000054950.4	2369	6	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_5	93.4742745358315	3255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTTCTAGGTCATTT	-17	True	NA	8	True	AATAAA	-18	NA	32091073	32105722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32091451_32097143_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
transcript_2247.nic	chr1	-	807	3	FSM	ENSG00000236810.7	ENST00000686609.1	808	3	-5	6	-5	-2	multi-exon	FALSE	canonical	1	1	junction_2	17.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	NA	False	NA	-3	True	ATTAAA	-18	NA	23778318	23760520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23761152_23772110_23772167_23778198
transcript_2248.nic	chr1	-	718	3	FSM	ENSG00000236810.7	ENST00000686609.1	808	3	-5	95	-5	-91	multi-exon	FALSE	canonical	1	1	junction_2	17.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAACATAGCATTACAG	NA	False	NA	-92	True	AATAAA	-17	NA	23778318	23760609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23761152_23772110_23772167_23778198
transcript_22485.known	chr11	+	1207	8	FSM	ENSG00000149100.13	ENST00000524896.5	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	884.465732887974	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTCCAACGTCTC	-1	True	NA	NA	False	NA	NA	NA	32583833	32602823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32583930_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_2250.known	chr1	+	1590	6	FSM	ENSG00000057757.10	ENST00000246151.9	1590	6	0	0	0	0	multi-exon	TRUE	canonical	3	390	junction_4	40.0149971885542	1057	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTCTTTTGAG	14	True	NA	17	True	AATAAA	-17	NA	23778417	23788232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23778714_23779437_23779482_23779863_23779942_23785674_23785780_23786314_23786424_23787274
transcript_22500.known	chr11	+	5047	11	FSM	ENSG00000149100.13	ENST00000531120.6	5047	11	0	0	0	0	multi-exon	FALSE	canonical	3	2394	junction_7	205.125839425461	4097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCATAAAATTCATTTA	-4	True	NA	9	True	AATAAA	-20	NA	32583830	32606264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_22501.known	chr11	+	889	8	FSM	ENSG00000149100.13	ENST00000323213.9	889	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	928.373759180371	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATCAGAATAATAAAGA	4	True	NA	NA	False	NA	NA	NA	32583838	32596010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32583930_32586933_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965
transcript_22502.known	chr11	+	2236	5	FSM	ENSG00000149100.13	ENST00000525782.5	2236	5	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	1053.34642331001	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	32583831	32601501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32583930_32589546_32589642_32593865_32595014_32595965_32596048_32600688
transcript_22503.known	chr11	+	5543	6	FSM	ENSG00000135378.4	ENST00000257836.4	5543	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.8	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTATTGCTTGTTTCAT	5	True	NA	7	True	AATAAA	-16	NA	32829926	32858120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32830174_32830507_32830633_32836657_32836822_32838881_32838931_32840106_32840240_32853295
transcript_22507.known	chr11	+	1741	9	FSM	ENSG00000121690.11	ENST00000241051.8	1741	9	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_5	4.29934588047996	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTGTGTCAGAAGCTAT	-20	True	NA	14	True	AATAAA	-16	NA	33015877	33033582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_33016029_33025658_33026050_33027685_33027814_33028602_33028793_33031377_33031590_33032335_33032479_33032667_33032794_33032888_33032968_33033261
transcript_22511.known	chr11	+	2649	10	FSM	ENSG00000176148.16	ENST00000334274.9	2649	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	9.32274531706801	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGAATTAGATTTAACT	-24	True	NA	10	True	ATTAAA	-1	NA	33039571	33073550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_33039793_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_22516.known	chr11	+	2633	10	FSM	ENSG00000176148.16	ENST00000432887.5	2633	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.127372185934	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTGTTTTCAGATAAA	-4	True	NA	23	True	ATTAAA	-14	NA	33040014	33073563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_33040207_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_22522.known	chr11	-	558	4	FSM	ENSG00000176102.13	ENST00000524556.1	558	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	311.365094739636	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGTTAGGAACATAG	-15	True	NA	42	True	NA	NA	NA	33161495	33141607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33141763_33141884_33141987_33144869_33144974_33161298
transcript_22531.known	chr11	-	2812	21	FSM	ENSG00000176102.13	ENST00000323959.9	2812	21	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_10	119.590081110433	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	0	True	NA	-26	True	AATAAA	-15	NA	33161480	33084583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
transcript_22532.known	chr11	-	2911	22	FSM	ENSG00000176102.13	ENST00000524827.6	2911	22	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_21	115.856193603846	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAAACATCATGCTTC	-14	True	NA	-37	True	AATAAA	-4	NA	33161494	33084594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33156707_33156804_33161298
transcript_22533.known	chr11	-	1132	3	FSM	ENSG00000176102.13	ENST00000438862.6	1132	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	23	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGAAGACTGGAATTA	NA	False	NA	NA	False	TTTAAA	-45	NA	33161531	33140965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33141763_33141884_33141987_33161298
transcript_22534.known	chr11	-	715	2	FSM	ENSG00000176102.13	ENST00000431742.2	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTGCAACAACATTAAAA	-11	True	NA	16	True	NA	NA	NA	33161491	33141464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33141987_33161298
transcript_22535.known	chr11	+	1898	10	FSM	ENSG00000176148.16	ENST00000531632.6	1898	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.6923377003705	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTATTTTGAGAGATTG	12	True	NA	11	True	NA	NA	NA	33040030	33072848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_33040203_33043749_33043937_33054592_33054726_33057114_33057236_33057918_33058140_33058958_33059096_33061529_33061727_33065829_33066012_33068686_33068860_33072473
transcript_22538.nnic	chr11	+	639	2	Fusion	ENSG00000241255.1_ENSG00000247151.7	novel	568	3	NA	NA	-28	75	multi-exon	FALSE	canonical	0	0	junction_1	0	517	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGATCTATCTTATTTG	1	True	NA	NA	False	AATAAA	-17	NA	33161628	33237484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_33161782_33236998
transcript_22539.known	chr11	-	7724	6	FSM	ENSG00000085063.17	ENST00000651785.1	7724	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	223.762910242068	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCTTTAATATGTAATAA	-3	True	NA	NA	False	AATATA	-25	NA	33736423	33703009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33733494_33733611_33736381
transcript_22541.known	chr11	-	678	5	FSM	ENSG00000085063.17	ENST00000351554.8	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	210.182063935056	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTAAGATAGAGGGGC	NA	False	NA	-26	True	AATAAA	-15	NA	33736479	33709995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33736381
transcript_22544.known	chr11	-	686	5	FSM	ENSG00000085063.17	ENST00000527577.5	686	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	238.735601660079	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGCAACCTGGCTAAGA	-5	True	NA	-35	True	AATAAA	-6	NA	33736425	33710004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33733494_33733611_33736381
transcript_22545.known	chr11	-	1124	5	FSM	ENSG00000085063.17	ENST00000533403.6	1124	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	197.890594773981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAGAGAGGTACAAGTG	12	True	NA	-122	True	NA	NA	NA	33736408	33709555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33711383_33711506_33717369_33717472_33722378_33722464_33736381
transcript_22548.known	chr11	-	7563	4	FSM	ENSG00000085063.17	ENST00000642928.2	7563	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	82.2692057954993	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCTTTAATATGTAATAA	-3	True	NA	NA	False	AATATA	-25	NA	33736423	33703009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33736381
transcript_22554.known	chr11	-	2403	11	FSM	ENSG00000110429.14	ENST00000265651.8	2403	11	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_1	41.4077287471796	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTGTATAATTG	-8	True	NA	-3	True	TTTAAA	-19	NA	33774520	33740943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_22556.nnic	chr11	-	1697	11	NNC	ENSG00000110429.14	novel	1672	10	NA	NA	-29	-1037	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	76.0763432349374	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGCTACTGATGGTTG	NA	False	NA	-2	True	AATAAA	-17	NA	33774572	33742775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_33743159_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_22557.nic	chr11	-	3355	11	NIC	ENSG00000110429.14	novel	3217	11	NA	NA	-29	666	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	75.2478571123457	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTCTCCTACATTAAT	NA	False	NA	0	True	AATAAA	-16	NA	33774572	33744018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_33746060_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_22560.known	chr11	-	1672	10	FSM	ENSG00000110429.14	ENST00000448981.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	31.1555238547945	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTGGATGTGTAC	NA	False	NA	NA	False	AATAAA	-33	NA	33774543	33746742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_22561.known	chr11	+	386	3	FSM	ENSG00000254508.5	ENST00000533046.5	386	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGCATCAGTCACTAAG	33	False	NA	NA	False	AATAAA	-20	NA	33774698	33775670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_33774752_33775253_33775364_33775447
transcript_22562.known	chr11	+	3438	18	FSM	ENSG00000135387.21	ENST00000532820.5	3438	18	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_17	98.4053828668058	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGATGGTATAAGCAAAA	478	False	NA	-38	True	NA	NA	NA	34052209	34100464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34052637_34071725_34071789_34071900_34071988_34076235_34076475_34076559_34076643_34079627_34079766_34082824_34082878_34082954_34083042_34086063_34086220_34086304_34086414_34089394_34089457_34090178_34090290_34090528_34090679_34091905_34092057_34096478_34096674_34097195_34097297_34097697_34097762_34099302
transcript_22565.known	chr11	-	1167	2	FSM	ENSG00000286626.1	ENST00000664488.1	1167	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTTCCTCGGAATT	-8	True	NA	NA	False	ATTAAA	-14	NA	34052132	34049966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_34051034_34052032
transcript_22567.known	chr11	+	3973	29	FSM	ENSG00000135372.10	ENST00000257829.8	3973	29	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_13	23.8779849079713	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTGTGAGTGTTC	10	True	NA	21	True	AATAAA	-17	NA	34105628	34146908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34105793_34108210_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_22579.known	chr11	-	4905	17	FSM	ENSG00000166016.6	ENST00000435224.3	4905	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	3.65504787930336	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCACTGCTCCTG	-3	True	NA	0	True	AATAAA	-17	NA	34358010	34150986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_34152585_34154264_34154379_34154700_34154770_34159295_34159387_34159905_34160009_34160247_34160354_34160902_34161082_34162575_34162806_34164685_34164822_34165259_34165357_34167258_34167361_34167902_34167993_34170905_34171072_34173154_34173308_34197324_34197539_34204543_34204691_34356700
transcript_22582.known	chr11	+	2291	13	FSM	ENSG00000121691.7	ENST00000241052.5	2291	13	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	21.2581683647068	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTATTTTCTTTCTT	-24	True	NA	10	True	AATAAA	-20	NA	34438933	34472060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34439080_34449191_34449364_34450987_34451099_34452076_34452208_34453089_34453195_34453800_34453927_34456010_34456203_34456664_34456818_34461250_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
transcript_22587.known	chr11	+	348	2	FSM	ENSG00000121691.7	ENST00000525707.2	348	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATAAACTA	NA	False	NA	NA	False	AAAAAG	-39	NA	34464110	34468510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34464236_34468287
transcript_22595.nnic	chr11	+	749	3	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAAAGAATGGGCTTTA	NA	False	NA	NA	False	NA	NA	NA	34692383	34715185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr11_+_34692890_34714693_34714808_34715056
transcript_22596.nnic	chr11	+	1993	2	Genic_Genomic	ENSG00000271369.1	novel	562	1	NA	NA	-17265	547	multi-exon	FALSE	canonical	3	27	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGTATAAGTATTTTATT	NA	False	NA	2	True	AATAAA	-5	NA	34692334	34710708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr11_+_34692890_34709270
transcript_22598.known	chr11	+	2659	11	FSM	ENSG00000110435.13	ENST00000448838.8	2659	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	136.877499977169	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	23	False	NA	10	True	AATAAA	-19	NA	34916129	34996128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34916487_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_226.known	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_2	37.5	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_-_8976_9189_9299_9434
transcript_22600.known	chr11	+	2500	11	FSM	ENSG00000110435.13	ENST00000227868.9	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_10	42.4758755059857	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	-17	True	NA	10	True	AATAAA	-19	NA	34916617	34996128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_22602.nnic	chr11	-	1286	8	NNC	ENSG00000149089.13	novel	1246	7	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_7	131.031075921488	165	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	98	False	NA	-12	True	AATAAA	-15	NA	34916399	34882369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34896760_34896856_34916227
transcript_22608.known	chr11	-	1042	6	FSM	ENSG00000149089.13	ENST00000527830.1	1042	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	104.396168512068	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	3	True	NA	-12	True	AATAAA	-15	NA	34916351	34882369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34916227
transcript_22615.known	chr11	-	1246	7	FSM	ENSG00000149089.13	ENST00000395787.4	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	68.5599899520283	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCCCTCAATGTTAATG	-25	True	NA	-10	True	AATAAA	-21	NA	34916379	34882294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
transcript_22616.known	chr11	+	2292	12	FSM	ENSG00000026508.21	ENST00000433892.6	2292	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	5.46514122370514	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGTGATTCTT	17	False	NA	13	True	AATAAA	-24	NA	35139187	35230027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35208104_35208207_35209964_35210055_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_22621.known	chr11	+	4288	9	FSM	ENSG00000026508.21	ENST00000263398.11	4288	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	7.806247497998	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGTCTCTAATTTAA	0	True	NA	NA	False	ATTAAA	-32	NA	35139170	35232402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_22623.known	chr11	+	1768	8	FSM	ENSG00000026508.21	ENST00000425428.6	1768	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.0416650622512	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGTGATTCTT	11	False	NA	13	True	AATAAA	-24	NA	35139181	35230027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35139371_35176574_35176741_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_22625.known	chr11	+	518	2	FSM	ENSG00000255542.1	ENST00000534165.1	518	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTTACCTCCTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	35419056	35421002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35419108_35420535
transcript_22627.known	chr11	-	2785	12	FSM	ENSG00000149090.13	ENST00000622144.4	2785	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	38.8244619148187	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATGCTCTTATTTCT	1	True	NA	NA	False	AATAAA	-32	NA	35525623	35431822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35451887_35451939_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_22630.known	chr11	-	2723	11	FSM	ENSG00000149090.13	ENST00000619888.5	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	15.2921548514263	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTGCTATGCTCTTAT	8	True	NA	NA	False	AATAAA	-28	NA	35525616	35431826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_22634.known	chr11	-	2801	9	FSM	ENSG00000149090.13	ENST00000615849.4	2801	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	36.3625408215653	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAATGTGCTATGCTC	1	True	NA	NA	False	AATAAA	-24	NA	35526031	35431830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35492044_35492174_35494095_35494273_35525512
transcript_22635.known	chr11	+	12994	5	FSM	ENSG00000166326.7	ENST00000299413.7	12994	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	23.7315717979235	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCAGGTGTTTCTT	2	True	NA	NA	False	ATTAAA	-16	NA	35662774	35818007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35663781_35685258_35685337_35725923_35726164_35735425_35735446_35806357
transcript_22642.known	chr11	+	3814	6	FSM	ENSG00000179241.13	ENST00000315571.6	3814	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	15.8619040471187	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	-7	True	NA	22	True	AATAAA	-18	NA	35944061	36232136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_22646.known	chr11	+	1654	1	FSM	ENSG00000280321.1	ENST00000623261.1	1654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGGCGTGGTGGCAC	NA	False	NA	NA	False	AAAAAG	-4	NA	36196247	36197901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36196200_36197900
transcript_22647.nnic	chr11	-	1401	6	NNC	ENSG00000110442.12	novel	2949	6	NA	NA	44	0	intron_retention	FALSE	canonical	2	2	junction_5	145.224515836686	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTTTGTAGCTTCTT	41	False	NA	-4	True	ACTAAA	-19	NA	36289380	36273959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289197
transcript_22648.known	chr11	-	917	5	FSM	ENSG00000110442.12	ENST00000452374.6	917	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	155.584382249633	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGGAGGGAATCGGACA	NA	False	NA	NA	False	NA	NA	NA	36289449	36274222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36289361
transcript_22654.known	chr11	-	2949	6	FSM	ENSG00000110442.12	ENST00000263401.10	2949	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	26.55861442169	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTGATCATTTAAGGCA	-3	True	NA	NA	False	AATAAA	-17	NA	36289424	36272291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289361
transcript_22657.known	chr11	-	7885	7	FSM	ENSG00000175104.15	ENST00000526995.6	7885	7	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_3	15.2032525759749	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATAGTCCAAGTGGTTT	-6	True	NA	-11	True	ATTAAA	-21	NA	36510272	36483768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
transcript_22662.known	chr11	+	1005	7	FSM	ENSG00000166352.18	ENST00000676979.1	1005	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	124.813193747029	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-21	True	NA	17	True	AATAAA	-18	NA	36594498	36659272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594642_36597643_36597731_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_22663.known	chr11	+	1251	7	FSM	ENSG00000166352.18	ENST00000532470.3	1251	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.485390915968	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGCACTCATTTATC	26	False	NA	36	True	AATAAA	-37	NA	36594545	36659291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594916_36597643_36597731_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_22666.known	chr11	+	1084	7	FSM	ENSG00000166352.18	ENST00000530697.6	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.485390915968	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	20	True	NA	17	True	AATAAA	-18	NA	36594539	36659272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594762_36597643_36597731_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_22667.known	chr11	+	866	6	FSM	ENSG00000166352.18	ENST00000334307.10	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	64.2507587503836	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-18	True	NA	17	True	AATAAA	-18	NA	36594501	36659272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_22670.known	chr11	+	930	6	FSM	ENSG00000166352.18	ENST00000531554.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	61.3070958372683	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTGCACTCATT	-18	True	NA	32	True	AATAAA	-33	NA	36594501	36659287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_22673.known	chr11	+	1062	6	FSM	ENSG00000166352.18	ENST00000446510.6	1062	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	103.52854678783	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTGCACTCATTTAT	51	False	NA	35	True	AATAAA	-36	NA	36594492	36659290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594762_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_22674.known	chr11	+	1207	6	FSM	ENSG00000166352.18	ENST00000617650.5	1207	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	107.767527576724	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGCACTCATTTA	-19	True	NA	34	True	AATAAA	-35	NA	36594500	36659289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594916_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_22677.known	chr11	+	3438	5	FSM	ENSG00000166352.18	ENST00000679072.1	3438	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	122.921468832747	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAATATATTATTAAAA	45	False	NA	NA	False	ATTAAA	-3	NA	36594486	36661896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_22681.known	chr11	+	3485	5	FSM	ENSG00000166352.18	ENST00000677116.1	3485	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	122.217787167008	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATCCACCAATTTCT	-18	True	NA	NA	False	ATTAAA	-16	NA	36594501	36661909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_22684.known	chr11	+	861	5	FSM	ENSG00000166352.18	ENST00000528092.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	141.836173101223	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACATGTGTGCACTC	66	False	NA	29	True	AATAAA	-30	NA	36594620	36659284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594762_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_22687.known	chr11	+	2571	5	FSM	ENSG00000166352.18	ENST00000678480.1	2571	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	144.590801920454	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTGCATTCTAGTACACT	218	False	NA	NA	False	AATATA	-9	NA	36594772	36660992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594916_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_22692.known	chr11	+	633	4	FSM	ENSG00000166352.18	ENST00000347206.8	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	110.236110236165	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-7	True	NA	17	True	AATAAA	-18	NA	36594512	36659272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594593_36610080_36610240_36648015_36648156_36659018
transcript_22695.known	chr11	+	646	4	FSM	ENSG00000166352.18	ENST00000527108.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	108.70142593361	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCCTTTGTGGAAATT	26	False	NA	14	True	AATAAA	-15	NA	36594545	36659269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594642_36610080_36610240_36648015_36648156_36659018
transcript_22697.known	chr11	+	801	4	FSM	ENSG00000166352.18	ENST00000534635.5	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	139.490342158716	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTGTGGAAATTTACAT	-4	True	NA	19	True	AATAAA	-20	NA	36594515	36659274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594762_36610080_36610240_36648015_36648156_36659018
transcript_227.known	SIRV3	-	589	3	FSM	SIRV3C	SIRV310	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_2	58	7767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGGTTTTGGGTACT	NA	False	NA	NA	False	NA	NA	NA	9914	8759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_-_8967_9189_9325_9667
transcript_22707.known	chr11	+	488	3	FSM	ENSG00000166352.18	ENST00000677808.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	174	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	-21	True	NA	17	True	AATAAA	-18	NA	36594498	36659272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594593_36648015_36648156_36659018
transcript_22716.nic	chr11	+	4660	25	NIC	ENSG00000052841.15	novel	4488	24	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	404	junction_19	125.998835697883	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	-30	True	NA	17	True	AATAAA	-18	NA	43358918	43494931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_22717.known	chr11	+	4488	24	FSM	ENSG00000052841.15	ENST00000039989.9	4488	24	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_16	182.241587513064	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTCATGTGATTTT	-29	True	NA	17	True	AATAAA	-18	NA	43358919	43494931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43443324_43443585_43444055_43444210_43448001_43448123_43450081_43450242_43451181_43451266_43490238_43490359_43492019_43492164_43493772
transcript_22719.known	chr11	+	3648	20	FSM	ENSG00000052841.15	ENST00000299240.10	3648	20	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_19	163.072235578655	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTTCTCCTTCCTGCC	-17	True	NA	NA	False	TATAAA	-16	NA	43358931	43446719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930
transcript_2272.known	chr1	+	1635	10	FSM	ENSG00000011009.11	ENST00000374514.8	1635	10	0	0	0	0	multi-exon	TRUE	canonical	3	1752	junction_1	132.477904050934	5369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	-9	True	NA	13	True	ATTAAA	-17	NA	23791144	23795539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_22725.nic	chr11	+	1432	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-13	45097	-1	0	5prime_fragment	FALSE	canonical	3	720	junction_9	57.4716247753706	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCCTCTTGATTCTT	-30	True	NA	16	True	TATAAA	-32	NA	43358918	43401622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_22726.nic	chr11	+	1841	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-13	44688	-1	409	5prime_fragment	FALSE	canonical	3	720	junction_9	57.4716247753706	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAGAGAGAGATTTTGA	-30	True	NA	NA	False	AATAAA	-45	NA	43358918	43402031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_2273.known	chr1	+	1072	8	FSM	ENSG00000011009.11	ENST00000374502.7	1072	8	0	0	0	0	multi-exon	FALSE	canonical	3	1752	junction_1	130.029039142832	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGCAAGGCCTGGCCGG	5	True	NA	NA	False	NA	NA	NA	23791220	23794870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223
transcript_22733.nnic	chr11	+	1117	7	NNC	ENSG00000052841.15	novel	3648	20	NA	NA	-3	-1085	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	374.712778894271	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGATCTCAAAAAGTTC	-20	True	NA	NA	False	AAGAAA	-30	NA	43358928	43396973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_43359114_43373506_43373670_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708
transcript_22734.nic	chr11	+	964	6	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-13	49746	-1	-1085	5prime_fragment	FALSE	canonical	3	784	junction_2	41.4632367284562	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGATCTCAAAAAGTTC	-30	True	NA	NA	False	AAGAAA	-30	NA	43358918	43396973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708
transcript_22735.nic	chr11	+	1592	5	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-13	53874	-1	975	5prime_fragment	FALSE	canonical	3	784	junction_2	42.9963661255227	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGGTGGCTACTTTAG	-30	True	NA	NA	False	ATTAAA	-9	NA	43358918	43392845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820
transcript_22738.nic	chr11	+	1264	3	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-13	56089	-1	-1158	5prime_fragment	FALSE	canonical	3	784	junction_2	2	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAATAAATAAAAATAA	-30	True	NA	NA	False	AATAAA	-4	NA	43358918	43390630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651
transcript_22745.known	chr11	+	2257	15	FSM	ENSG00000166181.13	ENST00000455725.6	2257	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	526.886929743654	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCATTCCTACCTAG	-33	True	NA	NA	False	AATAAA	-14	NA	43311977	43342980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43312197_43318420_43318483_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_2275.known	chr1	-	1488	12	FSM	ENSG00000117308.15	ENST00000374497.7	1488	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	118.253265116629	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTTCTCACAGATGGT	373	False	NA	-7	True	AATAAA	-21	NA	23800402	23795599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800386
transcript_22750.known	chr11	+	3726	14	FSM	ENSG00000166181.13	ENST00000531273.6	3726	14	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_13	292.10679331064	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	-15	True	NA	18	True	AATAAA	-18	NA	43311995	43344529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_22751.known	chr11	+	3714	14	FSM	ENSG00000166181.13	ENST00000378852.7	3714	14	0	0	0	0	multi-exon	FALSE	canonical	3	793	junction_13	266.767212307154	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	-8	True	NA	18	True	AATAAA	-18	NA	43312002	43344529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342432
transcript_22753.known	chr11	+	1760	13	FSM	ENSG00000166181.13	ENST00000534600.5	1760	13	0	0	0	0	multi-exon	FALSE	canonical	3	1347	junction_9	160.173408633685	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTGTATTCAGAGGA	85	False	NA	NA	False	ATTAAA	-24	NA	43312095	43336230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857
transcript_22773.known	chr11	+	2396	11	FSM	ENSG00000149084.13	ENST00000278353.10	2396	11	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_3	53.0241454433732	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	20	True	NA	24	True	AATAAA	-43	NA	43680737	43856615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
transcript_22774.known	chr11	+	994	4	FSM	ENSG00000149084.13	ENST00000395700.4	994	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	441.706539080719	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATGAGTCCTTGTTTT	-12	True	NA	NA	False	AATAAA	-21	NA	43680780	43755536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43754872
transcript_22776.nic	chr11	+	1843	10	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	16.559656464499	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	NA	False	NA	22	True	ATTAAA	-24	NA	43880798	43920274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43881447_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_22778.known	chr11	+	1544	10	FSM	ENSG00000166199.13	ENST00000302708.9	1544	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	13.3813948598441	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	-14	True	NA	22	True	ATTAAA	-24	NA	43880830	43920274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_22786.nic	chr11	+	1246	8	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_6	20.4270728721089	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	-15	True	NA	22	True	ATTAAA	-24	NA	43880829	43920274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43919037_43919137_43919917
transcript_22789.known	chr11	+	2383	15	FSM	ENSG00000110455.14	ENST00000263776.9	2383	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4.59202947441298	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGAGGAGAATGGAATGA	4	True	NA	NA	False	AATAAA	-21	NA	44066269	44084237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_44066702_44067627_44067916_44071255_44071316_44073446_44073518_44074611_44074682_44075525_44075593_44077278_44077377_44077844_44077923_44078683_44078785_44079530_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
transcript_22796.nnic	chr11	+	1518	6	NNC	ENSG00000151348.16	novel	3631	4	NA	NA	-5541	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	97.6553121954971	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTGTCTTAAACACC	NA	False	NA	42	True	ATTAAA	-20	NA	44199441	44244931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_44199654_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_22798.known	chr11	+	2212	10	FSM	ENSG00000085117.12	ENST00000227155.9	2212	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	5.09901951359278	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	-12	True	NA	7	True	ATTAAA	-15	NA	44565662	44620358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_22804.known	chr11	-	3567	7	FSM	ENSG00000175274.19	ENST00000616990.4	3567	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	119.728396334741	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-2	True	AAGAAA	-30	NA	44951306	44932347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
transcript_22809.nic	chr11	-	936	6	NIC	ENSG00000175274.19	novel	1078	6	NA	NA	67	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	167.143531134172	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATGTCTGGTACCAGC	NA	False	NA	-63	True	AATAAA	-16	NA	44950975	44936217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_44936690_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
transcript_2281.known	chr1	-	1516	12	FSM	ENSG00000117308.15	ENST00000617979.5	1516	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	93.110260772683	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	0	True	NA	-6	True	AATAAA	-22	NA	23800754	23795598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_22813.known	chr11	-	5165	6	FSM	ENSG00000019505.8	ENST00000020926.8	5165	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	8.97997772825746	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTGCCTGGTGTTTTCT	-35	True	NA	-2	True	AATAAA	-16	NA	45286341	45240301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_45244357_45246382_45246513_45252420_45252723_45254269_45254405_45255665_45255892_45286024
transcript_22814.known	chr11	+	993	3	FSM	ENSG00000254427.3	ENST00000669834.2	1006	3	13	0	3	0	multi-exon	FALSE	canonical	3	7	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAAGCAAAAACCTGGG	-6	True	NA	NA	False	NA	NA	NA	45355472	45357211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45355603_45355878_45355926_45356395
transcript_22815.known	chr11	+	872	2	FSM	ENSG00000254427.3	ENST00000524565.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATTAGTGTGTGGTCT	22	False	NA	-1	True	AATAAA	-7	NA	45355500	45356648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45355603_45355878
transcript_22816.known	chr11	+	361	2	FSM	ENSG00000254427.3	ENST00000524488.1	361	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTGTGTGGTCTTTAGT	21	True	NA	4	True	AATAAA	-12	NA	45355499	45356653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45355603_45356395
transcript_22819.known	chr11	+	1756	3	FSM	ENSG00000181830.9	ENST00000442528.2	1756	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTTCTCTATCCTCTC	-8	True	NA	2	True	NA	NA	NA	45804071	45811558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45804518_45805809_45806337_45810775
transcript_2282.known	chr1	-	672	4	FSM	ENSG00000117308.15	ENST00000456977.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	150.178412415219	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGCAGGTTCTCACAGA	3833	False	NA	-11	True	AATAAA	-17	NA	23796942	23795603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23796008_23796150_23796266_23796696_23796783_23796875
transcript_22821.known	chr11	+	3429	2	FSM	ENSG00000181830.9	ENST00000314134.4	3429	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTGTGGCCTGAG	-1	True	NA	13	True	AATAAA	-13	NA	45805148	45813016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45806337_45810775
transcript_22827.known	chr11	-	1639	11	FSM	ENSG00000121680.16	ENST00000532681.5	1639	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	66.3633181810554	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	8	True	NA	-36	True	NA	NA	NA	45918812	45910204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45918121
transcript_2283.known	chr1	-	1801	10	FSM	ENSG00000117308.15	ENST00000481736.5	1801	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	102.594611559222	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-6	True	NA	-6	True	AATAAA	-22	NA	23800781	23795598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798731_23799365_23799437_23800711
transcript_22836.known	chr11	-	1668	11	FSM	ENSG00000121680.16	ENST00000378750.10	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	26.0124969966361	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCGGGCACTGGCCAG	2	True	NA	NA	False	AGTAAA	-23	NA	45917877	45909662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_22837.known	chr11	-	1479	11	FSM	ENSG00000121680.16	ENST00000241041.7	1479	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.7530694253176	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGGACATCGGGCACT	8	True	NA	NA	False	AGTAAA	-17	NA	45917829	45909668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_45910178_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_22845.known	chr11	-	3675	18	FSM	ENSG00000135365.17	ENST00000323180.10	3675	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	28.6915345049569	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGCCGTGTAGTTAT	266	False	NA	-6	True	ATTAAA	-17	NA	46121178	45932565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_45934226_45935635_45935740_45936493_45936570_45938156_45938313_45946075_45946099_45948885_45948947_45949401_45949482_45950205_45950258_45953526_45953626_45965314_45965609_45969814_45969905_45971115_45971368_45979759_45979967_46076753_46076820_46079133_46079167_46084165_46084303_46092182_46092224_46120934
transcript_22846.known	chr11	+	941	3	FSM	ENSG00000255314.4	ENST00000533793.1	941	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTTCTGAGTCTGT	25	False	NA	NA	False	AGTAAA	-15	NA	46171946	46177105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46172025_46174584_46174691_46176348
transcript_22847.known	chr11	+	2673	12	FSM	ENSG00000157613.11	ENST00000621158.5	2673	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15.7122892367042	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	-4	True	NA	NA	False	AAGAAA	-26	NA	46277661	46321409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46278214_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_22848.nnic	chr11	+	2214	12	NNC	ENSG00000157613.11	novel	1817	4	NA	NA	-406	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.8492005658121	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	NA	False	NA	NA	False	AAGAAA	-26	NA	46294719	46321409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_46294813_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_22853.known	chr11	+	1166	5	FSM	ENSG00000110492.17	ENST00000405308.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	4477.66883405863	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGCTCTTCTTTTTT	5	False	NA	-12	True	AATAAA	-17	NA	46380755	46383799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_22857.known	chr11	+	985	5	FSM	ENSG00000110492.17	ENST00000359803.7	985	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4569.42345241716	4102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	-9	True	NA	14	True	AATAAA	-43	NA	46381067	46383825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381289_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_22859.known	chr11	+	951	5	FSM	ENSG00000110492.17	ENST00000395565.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	4453.43206836031	3618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	1	True	NA	26	True	AATAAA	-33	NA	46381710	46383837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_22861.known	chr11	+	603	4	FSM	ENSG00000110492.17	ENST00000490240.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	4818.47391700826	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTAAACCTTAAGT	-16	True	NA	74	True	GGGGCT	-33	NA	46381060	46382821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586
transcript_22863.known	chr11	+	498	4	FSM	ENSG00000110492.17	ENST00000533283.5	498	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4994.28900512041	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACCCACCAGTGCCTT	24	False	NA	NA	False	NA	NA	NA	46381692	46383570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381759_46382293_46382462_46382586_46382749_46383468
transcript_22866.known	chr11	+	830	5	FSM	ENSG00000110492.17	ENST00000395566.9	830	5	0	0	0	0	multi-exon	FALSE	canonical	3	7276	junction_1	1423.58884074722	19866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTCTTCTTTTTTAA	0	True	NA	-10	True	AATAAA	-19	NA	46381668	46383801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381759_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_22867.known	chr11	+	1026	4	FSM	ENSG00000110492.17	ENST00000407067.1	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	10420	junction_2	161.831874349757	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	18	False	NA	17	True	AATAAA	-1	NA	46381752	46383783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46382134_46382293_46382462_46382586_46382749_46383468
transcript_22868.known	chr11	+	686	4	FSM	ENSG00000110492.17	ENST00000395569.8	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	4463.83843295829	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	0	True	NA	14	True	AATAAA	-43	NA	46381668	46383825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381759_46382056_46382134_46382586_46382749_46383468
transcript_22872.known	chr11	-	498	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	NA	False	NA	-60	True	NA	NA	NA	46429150	46428652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46428700_46429200
transcript_22879.nic	chr11	+	2989	18	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-288	0	combination_of_known_junctions	TRUE	canonical	3	84	junction_2	126.012247441232	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	NA	False	NA	18	True	AATAAA	-20	NA	46617238	46673041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_22880.known	chr11	+	4199	18	FSM	ENSG00000175224.17	ENST00000526508.5	4199	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	180.352634204105	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	7	True	NA	20	True	AATAAA	-20	NA	46617562	46674520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_22884.known	chr11	+	4014	17	FSM	ENSG00000175224.17	ENST00000524625.5	4014	17	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	72.7375418886286	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	21	True	NA	20	True	AATAAA	-20	NA	46617576	46674520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_22886.nic	chr11	+	2933	17	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-288	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	136.237370400893	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	NA	False	NA	18	True	AATAAA	-20	NA	46617238	46673041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_22887.known	chr11	+	4348	17	FSM	ENSG00000175224.17	ENST00000359513.8	4348	17	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	163.417972064733	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCGTTATCAGCTCTT	40	False	NA	NA	False	AGTAAA	-17	NA	46617595	46674818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_22888.known	chr11	+	2566	17	FSM	ENSG00000175224.17	ENST00000529655.5	2566	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	147.606688110668	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	-15	True	NA	18	True	AATAAA	-20	NA	46617540	46673041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46617891_46618324_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_2289.known	chr1	-	1570	9	FSM	ENSG00000117305.15	ENST00000374490.8	1570	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	27.2304976083802	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	2	True	NA	-10	True	ATTAAA	-21	NA	23825429	23801884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_22890.nic	chr11	+	2774	16	NIC	ENSG00000175224.17	novel	2566	17	NA	NA	-245	0	combination_of_known_junctions	FALSE	canonical	3	107	junction_1	95.0444574338182	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	-12	True	NA	18	True	AATAAA	-20	NA	46617281	46673041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_22894.known	chr11	+	2030	15	FSM	ENSG00000175224.17	ENST00000530500.5	2030	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	121.566224498318	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTCCTGCCTGGGCCT	7	True	NA	NA	False	NA	NA	NA	46617562	46672660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46617891_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_229.known	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_1	0	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_6057
transcript_2290.known	chr1	-	1354	7	FSM	ENSG00000117305.15	ENST00000436439.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	77.8897012162427	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	3	True	NA	-12	True	ATTAAA	-19	NA	23825428	23801886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_22904.known	chr11	-	1967	3	FSM	ENSG00000180423.4	ENST00000326737.3	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23	True	NA	NA	False	NA	NA	NA	46617227	46602860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46603910_46615567_46616382_46617123
transcript_22909.known	chr11	+	637	2	FSM	ENSG00000175224.17	ENST00000526485.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACAGCCTCCTGTCCTG	NA	False	NA	13	True	AATAAA	-13	NA	46672794	46674513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46673243_46674324
transcript_2291.known	chr1	-	2011	6	FSM	ENSG00000117305.15	ENST00000513148.1	2011	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	28.3224292743402	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGGCAACAGAGGGAG	15	True	NA	NA	False	NA	NA	NA	23825416	23809286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_22910.known	chr11	-	3395	13	FSM	ENSG00000175220.12	ENST00000311956.9	3395	13	0	0	0	0	multi-exon	TRUE	canonical	3	412	junction_2	53.7656308021728	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-19	True	NA	-12	True	AATAAA	-16	NA	46700619	46677079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
transcript_22912.known	chr11	-	901	4	FSM	ENSG00000175220.12	ENST00000529960.5	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	41.4273125150814	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTCCAGACATGTCCTGA	-3	True	NA	NA	False	NA	NA	NA	46700603	46687690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46688261_46695659_46695756_46695974_46696157_46700550
transcript_22914.known	chr11	+	2229	5	FSM	ENSG00000175213.3	ENST00000311764.3	2229	5	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_1	11.0113577727726	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGTGTCTGCATCTT	3	True	NA	17	True	CATAAA	-17	NA	46701030	46705912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46701100_46701398_46701677_46702703_46702766_46702983_46703244_46704352
transcript_22915.known	chr11	+	1990	14	FSM	ENSG00000180210.15	ENST00000311907.10	1990	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.58767441850387	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCAATGCTCCCAGTGCT	-3	True	NA	NA	False	AATAAA	-16	NA	46719212	46739506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46719315_46719701_46719863_46720522_46720548_46720789_46720841_46723179_46723286_46723381_46723519_46725858_46726174_46726497_46726627_46726710_46726838_46727995_46728164_46728663_46728838_46729379_46729562_46739047_46739119_46739264
transcript_22917.known	chr11	-	7172	44	FSM	ENSG00000175216.15	ENST00000529230.6	7172	44	0	0	0	0	multi-exon	TRUE	canonical	3	810	junction_28	90.5203454297571	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAAAGTGAGCTGAGTA	-12	True	NA	NA	False	NA	NA	NA	46846280	46743047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46754887_46755068_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_2292.known	chr1	-	2151	10	FSM	ENSG00000117305.15	ENST00000374487.6	2151	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	100.166528008778	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	7490	False	NA	-12	True	ATTAAA	-19	NA	23838620	23801886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23826083_23826184_23838063
transcript_22922.known	chr11	-	6532	43	FSM	ENSG00000175216.15	ENST00000312055.9	6532	43	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	173.722385201739	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAAGATGCTCCATAT	NA	False	NA	-7	True	AATAAA	-21	NA	46846308	46743535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_22927.nic	chr11	-	952	7	NIC	ENSG00000175216.15	novel	6532	43	NA	NA	7	6804	combination_of_known_junctions	FALSE	canonical	3	84	junction_6	342.33240019347	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTAATAGTTAAACTTCT	-21	True	NA	-1	True	NA	NA	NA	46846289	46809398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821249_46846219
transcript_2293.known	chr1	-	2043	8	FSM	ENSG00000179163.12	ENST00000374479.4	2043	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	7.92824967172092	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTATAGCTTTCTTTTC	31	True	NA	3	True	AATAAA	-36	NA	23868290	23845076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867897
transcript_22930.nnic	chr11	+	700	4	NNC	ENSG00000247675.8	novel	731	4	NA	NA	-31	9011	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.42809041582063	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCATTTTTTGTCTTT	125	False	NA	NA	False	AATACA	-19	NA	46846378	46855922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_46846500_46846609_46846718_46852851_46852947_46855546
transcript_22931.known	chr11	+	1540	3	FSM	ENSG00000247675.8	ENST00000502049.3	1540	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCATTTGATTGGGG	0	True	NA	NA	False	AATAAA	-44	NA	46846415	46874421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46846500_46846609_46846718_46873073
transcript_22932.nic	chr11	+	251	2	FSM	ENSG00000247675.8	ENST00000685514.1	392	2	-31	172	-31	0	multi-exon	FALSE	canonical	3	20	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGGAGTTGTTTCCTT	125	False	NA	NA	False	AGTAAA	-18	NA	46846378	46846739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46846500_46846609
transcript_22941.known	chr11	+	1651	9	FSM	ENSG00000149179.14	ENST00000378615.7	1651	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	103.313842247784	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	25	True	NA	24	True	AATAAA	-21	NA	46936777	47162247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
transcript_22942.nnic	chr11	+	1174	9	NNC	ENSG00000149179.14	novel	1650	9	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	110.382007138845	145	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	218	False	NA	24	True	AATAAA	-21	NA	46936702	47162247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161997
transcript_22943.known	chr11	+	1166	9	FSM	ENSG00000149179.14	ENST00000378618.6	1166	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	111.99211746815	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTCCCTCTGGGGGAG	1	True	NA	NA	False	AATACA	-18	NA	46936753	47164385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47164092
transcript_22953.nic	chr11	+	1253	8	NIC	ENSG00000149179.14	novel	1916	8	NA	NA	6	214	combination_of_known_junctions	FALSE	canonical	3	12	junction_7	117.618893387213	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGGTGGCTCCACCTGT	218	False	NA	3	True	AATAAA	-17	NA	46936702	47160025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47159632
transcript_22955.known	chr11	+	1916	8	FSM	ENSG00000149179.14	ENST00000395460.6	1916	8	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_7	27.0788719507008	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	15	True	NA	24	True	AATAAA	-21	NA	46936767	47162247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126
transcript_22957.known	chr11	+	1069	8	FSM	ENSG00000149179.14	ENST00000527784.5	1069	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.670744472008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAATGGCCTGCTCTCC	27	True	NA	NA	False	GGGGCT	-31	NA	46936779	47161816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_22958.known	chr11	+	1527	8	FSM	ENSG00000149179.14	ENST00000525895.5	1527	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	104.729388893277	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	26	True	NA	22	True	AATAAA	-19	NA	46936778	47162245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_2296.known	chr1	+	380	3	FSM	ENSG00000189266.13	ENST00000471915.5	380	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	505.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGAGGTATAACATTC	NA	False	NA	NA	False	NA	NA	NA	23959108	23961465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23959257_23960928_23961135_23961439
transcript_22968.known	chr11	+	719	4	FSM	ENSG00000149179.14	ENST00000532840.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	14.7196014438797	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGAAAAGAGGGGCTG	7	True	NA	NA	False	NA	NA	NA	46936759	47138037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644
transcript_22971.known	chr11	+	825	3	FSM	ENSG00000149179.14	ENST00000522712.6	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAATATGAAGAAAGAAA	-8	True	NA	NA	False	ATTAAA	-28	NA	46936744	47053002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387
transcript_22975.known	chr11	+	770	2	FSM	ENSG00000149179.14	ENST00000531648.5	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAATCCCATCAAAAAAT	-5	True	NA	NA	False	AATATA	-34	NA	46936747	46987873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207
transcript_22978.known	chr11	-	2773	16	FSM	ENSG00000149182.15	ENST00000524782.6	2773	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_6	49.6429921204057	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	-5	True	NA	-6	True	AATAAA	-39	NA	47176879	47164300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_22980.nic	chr11	-	2855	16	NIC	ENSG00000149182.15	novel	2773	16	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_11	116.81476314614	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	9505	False	NA	-6	True	AATAAA	-39	NA	47176919	47164300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173883_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_22985.nic	chr11	-	2418	12	NIC	ENSG00000149182.15	novel	2773	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_9	135.293192489069	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	-5	True	NA	-6	True	AATAAA	-39	NA	47176879	47164300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47175850_47175924_47176515_47176635_47176781
transcript_22986.known	chr11	-	2613	11	FSM	ENSG00000149182.15	ENST00000627920.2	2613	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	147.521388279802	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTCTGGATCCTGCC	9860	False	NA	-4	True	AATAAA	-41	NA	47177125	47164298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47175850_47175924_47176515_47176635_47176781
transcript_22989.nic	chr11	-	1245	5	ISM	ENSG00000149182.15	ENST00000533939.5	577	6	-150	538	-115	13	5prime_fragment	FALSE	canonical	3	395	junction_2	65.5605636034346	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9988	False	NA	NA	False	NA	NA	NA	47176997	47174393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_22991.known	chr11	-	451	4	FSM	ENSG00000149182.15	ENST00000530794.1	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	75.5263015261718	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGTTAGGAGTATTCAG	-6	True	NA	NA	False	GGGGCT	-7	NA	47176880	47175153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47175314_47175850_47175924_47176515_47176635_47176781
transcript_22992.known	chr11	-	1723	3	FSM	ENSG00000149182.15	ENST00000526185.5	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	34	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	47176868	47174406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47175924_47176515_47176635_47176781
transcript_22995.known	chr11	-	1873	11	FSM	ENSG00000165912.16	ENST00000298838.11	1873	11	0	0	0	0	multi-exon	FALSE	canonical	2	315	junction_3	69.1450648998177	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-10	True	NA	-5	True	ATTAAA	-38	NA	47186434	47177521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_22996.known	chr11	-	1845	11	FSM	ENSG00000165912.16	ENST00000532457.5	1845	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	146.794039388526	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACACACACCCACACACA	-16	True	NA	-40	True	ATTAAA	-3	NA	47186440	47177556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47178047_47178365_47178488_47178893_47179028_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_22997.known	chr11	-	362	1	FSM	ENSG00000243802.2	ENST00000473109.2	362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAATTTTAATAAATTG	NA	False	NA	NA	False	NA	NA	NA	47191542	47191180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47191200_47191500
transcript_22998.nic	chr11	+	1958	11	NIC	ENSG00000134574.12	novel	1815	10	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	80.8860927477647	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	-19	True	NA	14	True	AATAAA	-15	NA	47214434	47239217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47214675_47215070_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23.known	ERCC-00054	+	256	1	FSM	ERCC-00054A	DQ516731	256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00054_+_0_300
transcript_230.known	SIRV3	-	161	1	FSM	SIRV3D	SIRV311	161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4762	4601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_-_4600_4800
transcript_23005.known	chr11	+	1815	10	FSM	ENSG00000134574.12	ENST00000256996.9	1815	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_5	56.8671833592088	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	-4	True	NA	14	True	AATAAA	-15	NA	47214973	47239217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23010.known	chr11	+	1591	9	FSM	ENSG00000134574.12	ENST00000378601.7	1591	9	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	86.42039328191	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	14	True	NA	-14	True	NA	NA	NA	47214991	47239189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23011.known	chr11	+	1092	9	FSM	ENSG00000134574.12	ENST00000378603.7	1092	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	91.1454023799336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	56	False	NA	NA	False	NA	NA	NA	47215136	47238849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23014.known	chr11	+	960	8	FSM	ENSG00000134574.12	ENST00000616278.4	960	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	113.385382205817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	56	False	NA	NA	False	NA	NA	NA	47215136	47238849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23017.known	chr11	+	717	6	FSM	ENSG00000134574.12	ENST00000378600.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	111.030446274884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACACTAAAGAAGGTGTG	56	False	NA	NA	False	NA	NA	NA	47215136	47238849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47237836_47238002_47238137_47238184_47238799
transcript_23018.known	chr11	+	556	4	FSM	ENSG00000134574.12	ENST00000622878.4	556	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	84.8384084925899	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCACACTCTGGATTCT	11	True	NA	NA	False	GGGGCT	-12	NA	47214464	47216873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47214675_47215070_47215264_47216335_47216473_47216857
transcript_23021.known	chr11	+	897	3	FSM	ENSG00000134574.12	ENST00000615695.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	7.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGAGTGTTTGTTGA	-23	True	NA	NA	False	AATAAA	-10	NA	47215057	47217411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47216857
transcript_23024.known	chr11	+	3101	8	FSM	ENSG00000134574.12	ENST00000612309.4	3101	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	60.1969556488346	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	14	True	NA	14	True	AATAAA	-15	NA	47215094	47239217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23025.known	chr11	+	660	3	FSM	ENSG00000134574.12	ENST00000614884.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	34.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	2892	False	NA	14	True	AATAAA	-15	NA	47237805	47239217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47238002_47238137_47238184_47238799
transcript_23026.known	chr11	+	2181	5	FSM	ENSG00000134574.12	ENST00000617022.4	2181	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	123.621145035952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTGCGTGGATCTTCC	31	True	NA	13	True	AATAAA	-14	NA	47215111	47239216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47216473_47216857_47217050_47237836_47238002_47238137_47238184_47238799
transcript_23031.nic	chr11	+	1660	10	NIC	ENSG00000025434.19	novel	2731	9	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	36.0928158782976	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	26	True	ATTAAA	-16	NA	47248869	47268845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23037.known	chr11	+	1852	10	FSM	ENSG00000025434.19	ENST00000441012.7	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	34.8800413410107	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTATGGCCATAAA	13	True	NA	2	True	AAGAAA	-16	NA	47257995	47269033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_2304.known	chr1	+	814	3	FSM	ENSG00000189266.13	ENST00000374468.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	492	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGTTTAAATTTA	11	True	NA	NA	False	TATAAA	-3	NA	23959827	23961880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23959999_23960932_23961135_23961439
transcript_23040.known	chr11	+	1501	9	FSM	ENSG00000025434.19	ENST00000395397.7	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	31.3876966341909	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCGTGGCATTAAAAG	16	False	NA	-7	True	NA	NA	NA	47248915	47268812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23043.known	chr11	+	1330	9	FSM	ENSG00000025434.19	ENST00000407404.5	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.2893829066666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAACATTCCTGGGAGCT	21	False	NA	-38	True	NA	NA	NA	47248955	47268781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23048.known	chr11	+	1480	9	FSM	ENSG00000025434.19	ENST00000405853.7	1480	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	39.0920388314552	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	15	True	NA	24	True	ATTAAA	-14	NA	47257997	47268843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23053.known	chr11	+	1704	8	FSM	ENSG00000025434.19	ENST00000481020.5	1704	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	29.2372421156752	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCAAAGGGTTGCGAG	24	False	NA	12	True	ATTAAA	-2	NA	47248923	47268831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23055.known	chr11	+	1352	8	FSM	ENSG00000025434.19	ENST00000405576.5	1352	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	36.2997723049023	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	16	False	NA	24	True	ATTAAA	-14	NA	47248915	47268843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23081.nnic	chr11	+	929	6	NIC	ENSG00000025434.19	novel	1352	8	NA	NA	-51	0	combination_of_known_splicesites	TRUE	canonical	3	14	junction_2	44.4567205268225	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	26	True	ATTAAA	-16	NA	47248864	47268845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47259790_47259980_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23094.nic	chr11	+	1418	5	NIC	ENSG00000025434.19	novel	1704	8	NA	NA	-51	0	intron_retention	FALSE	canonical	3	10	junction_1	45.4230117891802	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	26	True	ATTAAA	-16	NA	47248864	47268845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47261240_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23097.known	chr11	+	549	4	FSM	ENSG00000025434.19	ENST00000532630.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.1333722286915	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTGGCATTAAAAGAGAG	-8	True	NA	-3	True	NA	NA	NA	47248926	47268816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47267912_47268027_47268260_47268356_47268549
transcript_231.known	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_2	952.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_4081_4568_4780_6570
transcript_23100.known	chr11	-	1457	10	FSM	ENSG00000134575.13	ENST00000672075.1	1457	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	41.2187779333763	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGCCTCCTCCACGCT	-7	True	NA	NA	False	NA	NA	NA	47248814	47239884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245423_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_23102.known	chr11	+	924	2	FSM	ENSG00000110514.19	ENST00000469699.1	924	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGTGAACCCACTATTT	NA	False	NA	NA	False	NA	NA	NA	47328141	47329406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47328705_47329045
transcript_23103.nic	chr11	+	1464	11	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_10	53.7067034922085	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGCCTTGGTTCTGC	-4	True	NA	25	True	AATAAA	-13	NA	47408605	47416495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287_47415497_47416324
transcript_23104.known	chr11	+	2330	10	FSM	ENSG00000165915.14	ENST00000362021.9	2330	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	66.2225950772501	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	-20	True	NA	26	True	AATAAA	-14	NA	47408589	47416496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415038_47415160_47415287
transcript_23106.nic	chr11	+	2293	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	147	junction_1	30.1887069065795	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	-4	True	NA	26	True	AATAAA	-14	NA	47408605	47416496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
transcript_23117.known	chr11	-	1540	12	FSM	ENSG00000165916.9	ENST00000298852.8	1540	12	0	0	0	0	multi-exon	FALSE	canonical	3	2014	junction_11	141.657893100547	11526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCTTGTCTGCC	9	True	NA	-9	True	AATAAA	-16	NA	47426439	47418774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47418946_47419115_47419198_47420263_47420410_47420630_47420728_47422573_47422723_47422829_47422974_47424045_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426204
transcript_23118.known	chr11	-	580	6	FSM	ENSG00000165916.9	ENST00000526993.1	580	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	891.083609994034	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACGAGAGGCCCACGGAG	-9	True	NA	NA	False	NA	NA	NA	47426258	47424107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426132
transcript_23119.known	chr11	-	1622	8	FSM	ENSG00000165917.10	ENST00000298854.7	1622	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.494871659305394	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCAGGGATTCCGACTTTC	-1	True	NA	NA	False	AATAAA	-15	NA	47449136	47437763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47438048_47438731_47438932_47441158_47441213_47441610_47441734_47441822_47441922_47442655_47442815_47447811_47448151_47448772
transcript_23130.known	chr11	+	2462	4	FSM	ENSG00000110536.14	ENST00000326674.10	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_2	39.668067202166	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	-4	True	NA	20	True	AATAAA	-21	NA	47565598	47573461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47565797_47565905_47565987_47569699_47569892_47571470
transcript_23134.known	chr11	-	2460	4	FSM	ENSG00000123444.14	ENST00000395288.6	2460	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	64.0433880705538	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	7	True	NA	-2	True	AATAAA	-14	NA	47578969	47572197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578827
transcript_23136.known	chr11	-	2357	4	FSM	ENSG00000123444.14	ENST00000430070.7	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	29.0325487838889	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	6	True	NA	-1	True	AATAAA	-15	NA	47578970	47572196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578932
transcript_2314.known	chr1	-	1808	6	FSM	ENSG00000188529.15	ENST00000453840.7	1808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	602.195449999417	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTT	65	False	NA	-2	True	AATAAA	-23	NA	23980296	23966444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23967724_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_23140.known	chr11	+	928	3	FSM	ENSG00000110536.14	ENST00000326656.12	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	250.5	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTCCCCTGAGGGAA	-4	True	NA	NA	False	NA	NA	NA	47565598	47572119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47565797_47565905_47565987_47571470
transcript_23146.known	chr11	-	4583	14	FSM	ENSG00000149187.19	ENST00000310513.10	4583	14	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	107.557167955921	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	43	False	NA	0	True	ATTAAA	-19	NA	47553117	47465932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_23147.known	chr11	-	3650	16	FSM	ENSG00000149187.19	ENST00000531165.5	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_15	181.730154044091	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAGAAAACAAA	43	False	NA	NA	False	AATAAA	-19	NA	47553117	47470315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47472103_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476960_47477296_47477426_47478876_47478953_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47499452_47499605_47500860_47500933_47552991
transcript_23148.known	chr11	+	894	7	FSM	ENSG00000213619.11	ENST00000263774.9	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_2	40.1746188532013	6170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGTGTGTGCTTGTA	5	True	NA	28	True	AATAAA	-17	NA	47579073	47584562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348_47582469_47584313
transcript_23149.known	chr11	+	530	3	FSM	ENSG00000213619.11	ENST00000525212.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_2	32.5	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTGTGCTTGT	2983	False	NA	27	True	AATAAA	-16	NA	47582051	47584561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47582214_47582348_47582469_47584313
transcript_2315.known	chr1	-	1089	5	FSM	ENSG00000188529.15	ENST00000484146.6	1089	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	747.745737199484	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATGCAGTTTACATC	5	True	NA	NA	False	NA	NA	NA	23980356	23967172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23967724_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_2316.known	chr1	-	2917	6	FSM	ENSG00000188529.15	ENST00000343255.9	2917	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	601.265864655561	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGATTAACTGGAAT	1	True	NA	NA	False	AATAAA	-14	NA	23980327	23969082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_23169.known	chr11	-	2522	13	FSM	ENSG00000109919.10	ENST00000302503.8	2522	13	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_10	99.6617891783116	5956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTTTATCCTGTGGC	-13	True	NA	-10	True	AGTAAA	-18	NA	47642559	47617316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_2317.nnic	chr1	+	1142	8	Antisense	novelGene_ENSG00000142661.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_6	1.12485826771597	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCCATCTCTCTGATTC	NA	False	NA	NA	False	ATTAAA	-15	NA	24095385	24103931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_24095482_24096085_24096218_24097423_24097591_24097840_24097984_24098676_24098793_24099343_24099441_24101170_24101272_24103641
transcript_23170.known	chr11	-	930	11	FSM	ENSG00000109919.10	ENST00000530428.1	930	11	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_8	344.301553873926	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGAGGTATTTCTTT	70	False	NA	NA	False	AATATA	-31	NA	47642607	47622710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47638698_47638806_47638966_47639052_47642378
transcript_23171.nic	chr11	-	1325	7	NIC	ENSG00000165923.17	novel	3586	19	NA	NA	-9	163	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	3.53160335006952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTTAGTGGTAAACTC	-24	True	NA	NA	False	AATAAA	-35	NA	47715398	47699357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_47699554_47704542_47704729_47705863_47705918_47710376_47710512_47714283_47714348_47714617_47714751_47714841
transcript_23173.nic	chr11	-	1419	6	ISM	ENSG00000165923.17	ENST00000528244.5	2929	16	-32	32743	-12	163	intron_retention	FALSE	canonical	1	5	junction_2	3.05941170815567	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTTAGTGGTAAACTC	-27	True	NA	NA	False	AATAAA	-35	NA	47715401	47699357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_47699554_47704542_47704729_47705863_47705918_47710376_47710512_47714283_47714348_47714617
transcript_23177.known	chr11	-	305	2	FSM	ENSG00000165923.17	ENST00000425363.2	305	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTCCAATATTATGGCT	7118	False	NA	NA	False	NA	NA	NA	47714887	47714312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47714348_47714617
transcript_23178.known	chr11	-	5376	36	FSM	ENSG00000030066.13	ENST00000378460.6	5376	36	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_30	82.9448304474678	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGAGGTGTGTGTTTC	87	False	NA	-3	True	NA	NA	NA	47848467	47778086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47779195_47780342_47780448_47783072_47783199_47784921_47785064_47786452_47786555_47788181_47788306_47788500_47788612_47791929_47791991_47792785_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_23180.known	chr11	-	4138	28	FSM	ENSG00000030066.13	ENST00000528071.5	4138	28	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_22	72.6994489425003	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTTGTTTTATCA	4	True	NA	3	True	AATAAA	-22	NA	47848334	47792011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47792947_47797778_47797885_47797977_47798075_47798167_47798263_47798367_47798464_47801810_47801931_47803437_47803537_47804548_47804619_47806152_47806313_47807069_47807141_47808395_47808530_47812063_47812225_47812301_47812430_47812881_47813048_47813315_47813416_47815478_47815650_47815945_47816030_47818055_47818125_47819373_47819459_47821723_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_23184.nic	chr11	-	1746	9	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-207	29364	14	0	5prime_fragment	FALSE	canonical	3	634	junction_3	87.9797561942519	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	13	True	NA	NA	False	NA	NA	NA	47848541	47821375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_47821822_47822086_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_23185.nic	chr11	-	1837	8	NIC	ENSG00000030066.13	novel	4138	28	NA	NA	-19	14	intron_retention	FALSE	canonical	3	634	junction_2	93.6615705394607	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGACAAGGGAGC	-15	True	NA	NA	False	NA	NA	NA	47848353	47821361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_47822165_47835650_47835810_47836886_47837002_47837544_47837624_47839842_47840066_47840377_47840589_47847847_47847960_47848218
transcript_23194.nic	chr11	-	1026	4	ISM	ENSG00000030066.13	ENST00000528071.5	4138	28	-22	47489	-22	0	5prime_fragment	FALSE	canonical	3	725	junction_1	83.1745153277132	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTCTTGCCTGGA	-18	True	NA	-2	True	ATTAAA	-40	NA	47848356	47839500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_47840066_47840377_47840589_47847847_47847960_47848218
transcript_23195.known	chr11	-	1537	3	FSM	ENSG00000030066.13	ENST00000526870.1	1537	3	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	82.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTCTTGCCTGGA	-1	True	NA	-2	True	ATTAAA	-40	NA	47848555	47839500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47840589_47847847_47847960_47848218
transcript_23196.known	chr11	+	3158	9	FSM	ENSG00000149177.14	ENST00000440289.6	3158	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	11.2354072022335	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGATTCCTTGAAAC	28	False	NA	NA	False	AATAAA	-26	NA	47980579	48132720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47981009_48110057_48110077_48112746_48112984_48121002_48121267_48123612_48123871_48124967_48125187_48127779_48128044_48130458_48130717_48131510
transcript_23197.known	chr11	-	4110	19	FSM	ENSG00000086205.18	ENST00000256999.7	4110	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1.7950549357115	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGAATGTTTTCTATA	0	True	NA	NA	False	AATAAA	-24	NA	49208602	49145091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_49146946_49148638_49148732_49153845_49153928_49154227_49154493_49156716_49156808_49157951_49158044_49164704_49164773_49169194_49169259_49171194_49171278_49173356_49173477_49174891_49174978_49175858_49175958_49183148_49183243_49185668_49185856_49186643_49186770_49192792_49192895_49200254_49200442_49206066_49206173_49208291
transcript_23199.known	chr11	-	959	1	FSM	ENSG00000226268.3	ENST00000526165.1	959	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTAACAGGCCGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	49434438	49433479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_49433500_49434400
transcript_23202.known	chr11	-	1726	2	FSM	ENSG00000134817.12	ENST00000257254.3	1726	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTCATGAAAGTGT	-11	True	NA	10	True	AATAAA	-28	NA	57237235	57233576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57233859_57235791
transcript_23203.known	chr11	-	5820	12	FSM	ENSG00000149115.14	ENST00000358252.8	5820	12	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_11	96.0424320825466	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGTCCAGGTGGTG	-19	True	NA	-22	True	AATAAA	-17	NA	57324952	57299641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57300082_57300527_57300601_57300883_57301042_57301806_57301944_57302073_57302225_57302458_57302826_57308394_57310557_57312533_57313890_57317817_57317888_57320078_57320713_57321791_57321951_57324839
transcript_23204.known	chr11	-	592	2	FSM	ENSG00000149115.14	ENST00000532273.5	592	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTGTCCAGGTGGTG	NA	False	NA	-22	True	AATAAA	-17	NA	57300679	57299641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57300082_57300527
transcript_23205.known	chr11	-	2831	17	FSM	ENSG00000149136.9	ENST00000278412.7	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_16	89.0587718517946	5430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	-17	True	NA	-25	True	AATAAA	-19	NA	57335892	57325987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_23209.known	chr11	+	311	2	FSM	ENSG00000254662.1	ENST00000534162.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACTTGGAGAAAAAGTGG	1008	False	NA	NA	False	AATAAA	-14	NA	57325602	57327958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57325698_57327742
transcript_23215.nic	chr11	-	2615	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	34.8504836841291	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-2	True	NA	-1	True	AATAAA	-20	NA	57427153	57406953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426317_57426587_57426653_57427061
transcript_23216.known	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395124.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	20.4765705338663	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-11	True	NA	-1	True	AATAAA	-20	NA	57427121	57406953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57427061
transcript_23217.nic	chr11	-	2688	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	34.6222215470364	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-2	True	NA	-1	True	AATAAA	-20	NA	57427153	57406953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426390_57426587_57426653_57427061
transcript_23221.nic	chr11	-	2572	13	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_12	45.7701837687181	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	5761	False	57427151	-1	True	AATAAA	-20	NA	57427139	57406953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57427061
transcript_23232.known	chr11	-	2358	15	FSM	ENSG00000149150.9	ENST00000528450.5	2358	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	32.8202432554504	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	0	True	NA	-7	True	AATAAA	-14	NA	57514885	57484535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57514780
transcript_23238.nic	chr11	-	2775	14	ISM	ENSG00000149150.9	ENST00000528450.5	2358	15	239	0	-31	0	3prime_fragment	FALSE	canonical	3	91	junction_10	16.362028490727	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	1083	False	NA	-7	True	AATAAA	-14	NA	57514646	57484535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957
transcript_2325.nic	chr1	-	1041	6	ISM	ENSG00000185436.12	ENST00000374421.7	1476	7	-42	1724	-1	146	5prime_fragment	FALSE	canonical	3	47	junction_2	22.8613210466937	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTGCCTTAAGTTCCT	-20	True	NA	NA	False	AATAAA	-22	NA	24187290	24158853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
transcript_23265.known	chr11	-	668	3	FSM	ENSG00000134809.9	ENST00000257245.9	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_2	116	9517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGCAAAGCAGTGTGC	-12	True	NA	-8	True	TATAAA	-19	NA	57530754	57528463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57528919_57530118_57530235_57530657
transcript_23266.known	chr11	-	530	3	FSM	ENSG00000134809.9	ENST00000525158.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	693	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAAGACTGCCAGGCC	8	True	NA	-18	True	AATAAA	-22	NA	57530734	57528640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57528919_57530118_57530294_57530657
transcript_23267.known	chr11	-	486	3	FSM	ENSG00000134809.9	ENST00000525587.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	727	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTAGGCTCTCTGTAGA	534	False	NA	-3	True	AATAAA	-37	NA	57530803	57528625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57528919_57530118_57530235_57530726
transcript_23270.nic	chr11	+	1142	5	NIC	ENSG00000214872.9	novel	1695	8	NA	NA	5914	2	intron_retention	FALSE	canonical	1	1	junction_3	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCCCTCAGTGCTCTC	5914	False	NA	NA	False	ATTAAA	-21	NA	57543508	57550274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_57543921_57545880_57546037_57546232_57546348_57546500_57546653_57549967
transcript_23276.known	chr11	-	1219	4	FSM	ENSG00000156587.16	ENST00000287156.9	1219	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	70.4130669691358	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAGTGCAGCTGAGTC	-23	True	NA	-11	True	ATTAAA	-13	NA	57567672	57551661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567584
transcript_23278.known	chr11	-	1573	4	FSM	ENSG00000156587.16	ENST00000340573.8	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	237.885593417415	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCTGAGTCTTTGAT	17	True	NA	-5	True	ATTAAA	-19	NA	57568284	57551655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567848
transcript_2328.known	chr1	-	674	4	FSM	ENSG00000185436.12	ENST00000374418.3	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	4.32049379893857	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	22	True	NA	-11	True	AATAAA	-15	NA	24187248	24161377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24161685_24169416_24169602_24180730_24180855_24187190
transcript_23280.known	chr11	+	1830	8	FSM	ENSG00000149131.17	ENST00000278407.9	1830	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	162.065116668629	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	-3	True	NA	17	True	AATAAA	-17	NA	57597684	57614848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23282.known	chr11	+	2084	8	FSM	ENSG00000149131.17	ENST00000676670.1	2084	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	218.601305147625	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGTGTTGTAGAATAAA	23	False	NA	NA	False	NA	NA	NA	57598183	57619159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327_57614597_57618680
transcript_23284.known	chr11	+	1751	7	FSM	ENSG00000149131.17	ENST00000378324.6	1751	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	230.582595469245	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCTGCTTTGCCTTT	2	True	NA	16	True	AATAAA	-16	NA	57597689	57614847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57597723_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23286.nic	chr11	+	2047	7	ISM	ENSG00000149131.17	ENST00000278407.9	1830	8	309	0	-190	0	3prime_fragment	FALSE	canonical	3	480	junction_2	77.9650919037203	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	6	True	NA	17	True	AATAAA	-17	NA	57597993	57614848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23287.known	chr11	+	1786	7	FSM	ENSG00000149131.17	ENST00000677625.1	1786	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	235.8876851385	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGACAGACCATGACTT	23	False	NA	0	True	TATAAA	-4	NA	57598183	57614831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611770_57611937_57614327
transcript_23289.known	chr11	+	1468	6	FSM	ENSG00000149131.17	ENST00000677915.1	1468	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	259.145055904989	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGACAGACCATGACTT	-2	True	NA	0	True	TATAAA	-4	NA	57597685	57614831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57611716_57611937_57614327
transcript_23292.known	chr11	+	1004	6	FSM	ENSG00000149131.17	ENST00000531133.5	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	239.458221825854	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGCAGGATCAGGTTAG	41	True	NA	NA	False	NA	NA	NA	57598270	57614581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598322_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23294.nnic	chr11	+	1219	5	NIC	ENSG00000149131.17	novel	1830	8	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	254.733684462813	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	-42	True	NA	17	True	AATAAA	-17	NA	57598187	57614848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_57598322_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23295.nnic	chr11	+	909	4	NIC	ENSG00000149131.17	novel	1748	7	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	287.696985656012	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	NA	False	NA	17	True	AATAAA	-17	NA	57597627	57614848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_57597723_57598248_57598322_57611716_57611937_57614327
transcript_23296.known	chr11	+	907	4	FSM	ENSG00000149131.17	ENST00000531797.5	907	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	315.421411236883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTCTCTAGTTCAAG	3	True	NA	-41	True	NA	NA	NA	57598232	57614790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598322_57602034_57602170_57611716_57611937_57614327
transcript_2330.nnic	chr1	-	592	3	NIC	ENSG00000185436.12	novel	674	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	43.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	-20	True	NA	-11	True	AATAAA	-15	NA	24187290	24161377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_24161685_24169416_24169602_24187190
transcript_23300.known	chr11	+	841	3	FSM	ENSG00000149131.17	ENST00000528996.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTTGTTTTTTTAT	-1	True	NA	26	True	AATAAA	-26	NA	57598228	57614857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598329_57611725_57611937_57614327
transcript_23301.known	chr11	+	1748	7	FSM	ENSG00000149131.17	ENST00000619430.2	1748	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	248.796212904368	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	NA	False	NA	17	True	AATAAA	-17	NA	57597562	57614848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606407_57606548_57611716_57611937_57614327
transcript_23302.known	chr11	+	2359	3	FSM	ENSG00000149131.17	ENST00000677275.1	2359	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	239	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGCGGGCGGGCCAGGCG	-3	True	NA	NA	False	NA	NA	NA	57597684	57603856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57597723_57599878_57600378_57602034
transcript_23306.known	chr11	+	2790	2	FSM	ENSG00000254602.2	ENST00000530595.1	2790	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAAACCAA	9	True	NA	NA	False	NA	NA	NA	57638375	57652790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57638673_57650297
transcript_23308.known	chr11	+	1828	3	FSM	ENSG00000172409.7	ENST00000533682.2	1828	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	26	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGTATAATTTATTT	3	True	NA	33	True	AATAAA	-19	NA	57657761	57661865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57657861_57659454_57660083_57660764
transcript_23309.known	chr11	+	1634	3	FSM	ENSG00000172409.7	ENST00000302731.4	1634	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	108	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTATAATTTATT	4	True	NA	32	True	AATAAA	-18	NA	57657762	57661864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57657861_57659454_57659891_57660764
transcript_2331.nic	chr1	-	1086	3	ISM	ENSG00000185436.12	ENST00000374418.3	674	4	-42	7362	-1	-7362	5prime_fragment	FALSE	canonical	3	90	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAATTCTGTTTGCAA	-20	True	NA	NA	False	AATAAA	-11	NA	24187290	24168739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24169602_24180730_24180855_24187190
transcript_23310.known	chr11	+	4443	12	FSM	ENSG00000156599.11	ENST00000287169.8	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	39.3101673387223	759	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCCCCTGACTTGTG	51	True	NA	12	True	AATAAA	-18	NA	57668113	57701182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57668188_57672020_57673195_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_23314.known	chr11	-	1203	5	FSM	ENSG00000156603.20	ENST00000431606.5	1099	5	-108	4	-102	0	multi-exon	FALSE	canonical	3	401	junction_2	54.901616551792	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAAGTGTGACTGCC	NA	False	NA	-5	True	TTTAAA	-25	NA	57712323	57703713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57704107_57704301_57704397_57704718_57704816_57704972_57705230_57711962
transcript_23318.nic	chr11	+	919	3	ISM	ENSG00000288534.1	ENST00000673781.1	5179	19	21	28568	6	-28568	5prime_fragment	FALSE	canonical	0	0	junction_2	416.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCATAATGTTTCAAGAAA	5	True	NA	NA	False	AAAAAG	-18	NA	57712602	57789689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_57712808_57737607_57737669_57789036
transcript_2332.known	chr1	-	4566	7	FSM	ENSG00000185436.12	ENST00000327535.6	4566	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	27.633011658763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAATTGAATGGAAAAG	-19	True	NA	-15	True	AATAAA	-24	NA	24187289	24154167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24157892_24159051_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
transcript_23321.known	chr11	+	1697	8	FSM	ENSG00000213593.10	ENST00000529403.1	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	265.028223371915	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCGCGTTTGTGTGT	16	True	NA	21	True	AATAAA	-18	NA	57712613	57740969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_23324.known	chr11	+	1645	8	FSM	ENSG00000213593.10	ENST00000278422.9	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	104.653168677712	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	-5	True	NA	25	True	AATAAA	-22	NA	57712592	57740973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57737912_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_2333.known	chr1	+	2834	16	FSM	ENSG00000158055.17	ENST00000361548.9	2834	16	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_7	1.99332218503014	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGCTGCTCTCGTT	4	True	NA	NA	False	AATAAA	-28	NA	24319356	24355318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24319569_24331425_24331613_24334644_24334707_24336481_24336828_24337077_24337152_24337635_24337790_24337991_24338104_24339667_24339763_24342114_24342274_24342693_24342773_24342891_24343026_24344896_24344932_24346552_24346642_24347467_24347554_24350057_24350123_24354373
transcript_23335.known	chr11	+	1521	7	FSM	ENSG00000213593.10	ENST00000378312.8	1521	7	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	235.643091701553	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	5	True	NA	25	True	AATAAA	-22	NA	57712602	57740973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_23339.known	chr11	+	703	6	FSM	ENSG00000213593.10	ENST00000525035.5	703	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	386.05108470253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAGATTGACAAGAAAGG	14	True	NA	NA	False	NA	NA	NA	57712611	57739212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738663_57738771_57738973_57739040_57739130
transcript_23341.known	chr11	+	829	6	FSM	ENSG00000213593.10	ENST00000528110.5	829	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	326.361394775791	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	16	True	NA	NA	False	NA	NA	NA	57712613	57740369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_23346.known	chr11	+	663	4	FSM	ENSG00000213593.10	ENST00000530114.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	393.643945152921	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGATTTTAAAGAGGC	9	True	NA	NA	False	NA	NA	NA	57712606	57740369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57739130_57739261_57740098
transcript_23348.known	chr11	+	6024	19	FSM	ENSG00000198561.16	ENST00000534579.5	6024	19	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	250.798281050285	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-26	True	NA	12	True	ATTAAA	-18	NA	57761800	57819178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57762047_57789036_57789156_57791491_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_23349.known	chr11	+	5745	18	FSM	ENSG00000198561.16	ENST00000528232.5	5745	18	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	333.689493692403	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_23350.known	chr11	+	5727	17	FSM	ENSG00000198561.16	ENST00000529986.5	5727	17	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	199.86236475072	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_23351.known	chr11	+	5655	16	FSM	ENSG00000198561.16	ENST00000532245.5	5655	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	225.086018125417	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57762047_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_2336.known	chr1	+	1676	12	FSM	ENSG00000001461.17	ENST00000339255.2	1676	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.1830466456585	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	15	True	NA	-18	True	ATTAAA	-1	NA	24415813	24466310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24466003
transcript_23365.known	chr11	+	469	4	FSM	ENSG00000211450.11	ENST00000528798.1	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	1296.14436781642	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAGTAATAGAGTAAAAC	110	False	NA	-6	True	AATAAA	-16	NA	57741681	57743038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57741718_57741808_57741955_57742116_57742228_57742862
transcript_23366.known	chr11	+	1192	4	FSM	ENSG00000211450.11	ENST00000534355.6	1192	4	0	0	0	0	multi-exon	FALSE	canonical	3	2587	junction_3	164.991582276861	13981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTATCTTTTTCAAC	16	True	NA	5	True	AGTAAA	-20	NA	57741490	57743550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57741718_57741808_57741955_57742116_57742248_57742862
transcript_23367.known	chr11	+	833	3	FSM	ENSG00000211450.11	ENST00000388857.8	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	2737	junction_2	125	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGACCTTGTCTTTGTCC	0	True	NA	8	True	ATTAAA	-15	NA	57741571	57742657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57741718_57741808_57741955_57742116
transcript_23368.known	chr11	+	1454	2	FSM	ENSG00000211450.11	ENST00000533321.1	1454	2	0	0	0	0	multi-exon	FALSE	canonical	3	2987	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTTAAGGGATGGAC	-11	True	NA	13	True	AATAAA	-35	NA	57741512	57743057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57741718_57741808
transcript_23369.known	chr11	+	6135	19	FSM	ENSG00000198561.16	ENST00000358694.10	6135	19	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	237.063705820364	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	-30	True	NA	12	True	ATTAAA	-18	NA	57761796	57819178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57762047_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_2337.known	chr1	+	5372	12	FSM	ENSG00000001461.17	ENST00000374399.9	5372	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.4284682257282	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	3	True	NA	13	True	ATTAAA	-15	NA	24415801	24472976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24468985
transcript_23371.nic	chr11	-	1895	9	NIC	ENSG00000110031.13	novel	1879	9	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_8	3.73329613076702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTCATATTTGTTTG	-15	True	NA	0	True	AATAAA	-21	NA	58578149	58526870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58564154_58564202_58570555_58570714_58577985
transcript_23372.known	chr11	-	1879	9	FSM	ENSG00000110031.13	ENST00000528954.5	1879	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.9823830805185	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTCATATTTGTTTG	-32	True	NA	0	True	AATAAA	-21	NA	58578166	58526870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58564154_58564202_58570555_58570714_58578018
transcript_23373.known	chr11	-	1751	8	FSM	ENSG00000110031.13	ENST00000528489.1	1751	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	4.20883424647321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGGCTCACTGTCTTA	1414	False	NA	NA	False	NA	NA	NA	58578220	58527038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58570555_58570714_58577985
transcript_23382.known	chr11	+	1627	8	FSM	ENSG00000166840.14	ENST00000317391.8	1627	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.6471571383634	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAATCTGTATGGATACT	32	False	NA	NA	False	AATAAA	-17	NA	58927700	58956405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_58927830_58942539_58942585_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_23385.nic	chr11	+	1655	7	NIC	ENSG00000166840.14	novel	1627	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	5.31507290636732	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATCTGTATGGATACTT	-6	True	NA	NA	False	AATAAA	-18	NA	58927628	58956406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_58927830_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_23393.known	chr11	-	2810	6	FSM	ENSG00000255240.6	ENST00000533954.5	2810	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.09544511501033	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAAAAAAAAATAACC	NA	False	NA	NA	False	NA	NA	NA	59058659	58933642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_58935699_58979127_58979326_58994002_58994052_59051259_59051309_59053456_59053627_59058371
transcript_234.known	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_2	5.5	11773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_+_1347_1678_1886_2389
transcript_23404.known	chr11	-	3360	4	FSM	ENSG00000255240.6	ENST00000663130.1	3360	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAACGGAAACAGAAAAG	NA	False	NA	NA	False	AATAGA	-43	NA	59058468	59048367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59051309_59053456_59053627_59055294_59055447_59058371
transcript_23408.nnic	chr11	+	602	5	NNC	ENSG00000189057.11	novel	3506	4	NA	NA	-53	-328	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.5107514452304	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTGAATGGAAACTCCAGA	NA	False	NA	NA	False	AATAAA	-20	NA	59107131	59124347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_59107297_59108667_59108713_59109539_59109707_59123357_59123414_59124178
transcript_23409.known	chr11	+	3506	4	FSM	ENSG00000189057.11	ENST00000343597.4	3506	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	16.0485374896143	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGAGTATTGGAGGC	0	True	NA	15	True	AATAAA	-25	NA	59107236	59127412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59107297_59108667_59108713_59109539_59109707_59124178
transcript_23415.known	chr11	+	2364	3	FSM	ENSG00000189057.11	ENST00000529618.5	2364	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	44.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTATCAACAGGGTAAAC	-1	True	NA	NA	False	ATTAAA	-19	NA	59107235	59126436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59107297_59108667_59108713_59124178
transcript_23422.nnic	chr11	-	1164	5	NNC	ENSG00000245571.7	novel	2063	4	NA	NA	-75	773	intron_retention	FALSE	canonical	2	2	junction_2	9.82344135219425	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTTGGGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	59143090	59133247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_59133650_59134577_59134684_59136056_59136282_59139956_59140168_59142870
transcript_23425.known	chr11	-	880	4	FSM	ENSG00000245571.7	ENST00000531708.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.17726659862414	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACCGGCAAGGAATGGA	NA	False	NA	NA	False	NA	NA	NA	59143015	59135289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142870
transcript_23430.nic	chr11	-	1829	3	NIC	ENSG00000245571.7	novel	880	4	NA	NA	-75	406	intron_retention	FALSE	canonical	3	18	junction_2	3.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAAAGAGTTATAACC	NA	False	NA	NA	False	AGTAAA	-15	NA	59143090	59134883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_59136282_59139956_59140168_59142870
transcript_23432.nic	chr11	-	1037	3	ISM	ENSG00000245571.7	ENST00000531708.1	880	4	-75	386	-75	-386	5prime_fragment	FALSE	canonical	3	18	junction_2	3.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTATATATATATGTT	NA	False	NA	NA	False	ATTAAA	-22	NA	59143090	59135675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_59136282_59139956_59140168_59142870
transcript_23434.known	chr11	+	3676	5	FSM	ENSG00000166801.17	ENST00000674617.1	3676	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.4684369298311	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTCTGAGAAACCGTA	46	True	NA	6	True	ATTAAA	-3	NA	59142915	59155024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59142947_59143082_59143305_59145826_59145857_59148835_59148954_59151749
transcript_23435.known	chr11	+	3592	4	FSM	ENSG00000166801.17	ENST00000361723.7	3592	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	37.1872140511882	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	-46	True	NA	18	True	ATTAAA	-15	NA	59144778	59155036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59144897_59145826_59145857_59148796_59148954_59151749
transcript_23436.nnic	chr11	+	1175	4	NNC	ENSG00000287264.1	novel	1137	2	NA	NA	-8189	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.35702260395516	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTACCGTGTTTTGAATG	NA	False	NA	NA	False	AATAAA	-23	NA	59537412	59558882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_59537572_59537744_59537819_59545796_59545976_59558119
transcript_23440.known	chr11	-	4129	19	FSM	ENSG00000166889.14	ENST00000300146.10	4129	19	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_18	11.2717553706511	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-19	True	NA	-2	True	AATAAA	-22	NA	59669037	59636715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_23447.known	chr11	+	440	4	FSM	ENSG00000255139.2	ENST00000531108.1	440	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAAGGCTATGTCTCTC	696	False	NA	NA	False	NA	NA	NA	59616428	59639542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59616475_59620414_59620473_59635419_59635533_59639319
transcript_23449.known	chr11	+	6154	11	FSM	ENSG00000166900.17	ENST00000337979.9	6154	11	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_6	63.0318173623449	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTACTGTTGTTTTTT	-1	True	NA	7	True	AATAAA	-16	NA	59755375	59805878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
transcript_2345.known	chr1	-	2726	9	FSM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	16.814707104199	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-27	True	NA	-1	True	ATTAAA	-22	NA	24413782	24356998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_23451.known	chr11	+	690	4	FSM	ENSG00000166900.17	ENST00000530498.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_2	58.0861429258304	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTAGTTTTGTGACTTG	13	True	NA	6	True	ATTAAA	-16	NA	59755458	59789201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872
transcript_23452.known	chr11	+	534	4	FSM	ENSG00000166900.17	ENST00000530221.1	534	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	313.778407301855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTATTTTTCCATATCC	384	False	NA	23	True	AATAGA	-27	NA	59793478	59799947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59793515_59795371_59795483_59797282_59797397_59799674
transcript_23460.known	chr11	-	574	4	FSM	ENSG00000166902.5	ENST00000534340.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	476.816526559221	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCGGGACTCTAGAG	5629	False	NA	-27	True	NA	NA	NA	59810300	59806534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810239
transcript_23465.known	chr11	-	1083	4	FSM	ENSG00000166902.5	ENST00000300151.5	1083	4	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_3	17.7200451466693	5139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCTCATTGGTCAT	-13	True	NA	-5	True	AATAAA	-21	NA	59810778	59806139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810603
transcript_23466.nnic	chr11	+	918	5	NNC	ENSG00000071203.9	novel	578	5	NA	NA	8023	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTTCAGTATGTTTAA	8046	False	NA	NA	False	AATAAA	-19	NA	60500822	60507430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_60501045_60501982_60502040_60503700_60503818_60506727_60506839_60507019
transcript_23468.known	chr11	+	1488	5	FSM	ENSG00000110104.13	ENST00000535217.1	1488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	210.325194639159	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGGAGAGAAAACATAATA	36	False	NA	-12	True	AATACA	-43	NA	60842144	60851046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60842405_60842700_60842883_60847923_60848054_60849939_60850015_60850205
transcript_23469.known	chr11	+	1851	4	FSM	ENSG00000110104.13	ENST00000227520.10	1851	4	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	42.2084772949174	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTGTCCAATGGGGGAA	4	True	NA	23	True	AATAAA	-14	NA	60842112	60851081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60842883_60847923_60848054_60849939_60850015_60850205
transcript_2347.known	chr1	-	2544	8	FSM	ENSG00000001460.18	ENST00000003583.12	2544	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	31.4448010043645	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTTGGGTACCC	30	True	NA	-7	True	ATTAAA	-16	NA	24413725	24357004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24401318_24401457_24413673
transcript_23472.known	chr11	-	2337	16	FSM	ENSG00000110107.9	ENST00000227524.9	2337	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	13.5882302011704	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATGTCCCTGCGGTT	1	True	NA	43	True	AATAAA	-20	NA	60906585	60890546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_60891264_60897845_60897952_60898100_60898272_60898540_60898627_60898861_60898932_60899148_60899305_60900581_60900692_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
transcript_23475.known	chr11	+	810	2	FSM	ENSG00000257052.1	ENST00000544421.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAGACTGGACAATTTA	NA	False	NA	NA	False	NA	NA	NA	60906788	60909742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60907283_60909426
transcript_23476.known	chr11	-	405	2	FSM	ENSG00000256944.1	ENST00000543275.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCGTGCAGCTTTATT	8	False	NA	NA	False	AATAAA	-23	NA	60914052	60913165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_60913478_60913959
transcript_23477.known	chr11	-	2506	8	FSM	ENSG00000110446.12	ENST00000227880.8	2506	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	20.1139610363406	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	-15	True	NA	-2	True	CATAAA	-27	NA	60952176	60937083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942146_60943688_60943837_60946531_60946822_60950993
transcript_23478.known	chr11	-	1807	7	FSM	ENSG00000110446.12	ENST00000541505.5	1807	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	32.3505109009975	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	-3	True	NA	-2	True	CATAAA	-27	NA	60951646	60937083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60942034_60942146_60943688_60943837_60946531_60946822_60950993
transcript_23480.known	chr11	-	2461	9	FSM	ENSG00000110446.12	ENST00000681275.1	2461	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.6972031419867	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGTCCATGACAAGGGG	494	False	NA	-2	True	CATAAA	-27	NA	60952080	60937083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_60937374_60937515_60937567_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942146_60943688_60943837_60946531_60946822_60950993
transcript_23481.known	chr11	+	2129	4	FSM	ENSG00000110108.10	ENST00000227525.8	2129	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_2	7.78888096369861	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATTGCTTCCATGTC	-29	True	NA	45	True	AATAAA	-16	NA	60914157	60923443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60914269_60919685_60919931_60920885_60920989_60921773
transcript_23483.known	chr11	-	506	5	FSM	ENSG00000167987.11	ENST00000538036.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	71.894019222742	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTGGAAAAGCTCCAGGA	6474	False	NA	NA	False	NA	NA	NA	61161136	61132443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161080
transcript_23484.known	chr11	-	2673	5	FSM	ENSG00000167987.11	ENST00000301765.10	2673	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	16.9466073300823	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	17	True	NA	-5	True	AATAAA	-16	NA	61161426	61130256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161390
transcript_23488.known	chr11	+	1384	9	FSM	ENSG00000229183.10	ENST00000378149.9	1384	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	4.18330013267038	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61222346	61231694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61222457_61222942_61223106_61225338_61225457_61226325_61226445_61227119_61227320_61228670_61228788_61229918_61230064_61230165_61230265_61231381
transcript_23489.known	chr11	+	1382	9	FSM	ENSG00000256713.8	ENST00000312403.10	1382	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.66634112596269	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61241174	61251444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61241283_61241768_61241932_61244164_61244283_61245151_61245271_61245945_61246146_61248418_61248536_61249668_61249814_61249915_61250015_61251131
transcript_23490.known	chr11	-	4426	28	FSM	ENSG00000167986.15	ENST00000680367.1	4426	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	396.274783078237	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-6	True	NA	NA	False	AATAAA	-15	NA	61333807	61299454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907_61333009_61333525
transcript_23492.known	chr11	-	4245	27	FSM	ENSG00000167986.15	ENST00000301764.12	4245	27	0	0	0	0	multi-exon	TRUE	canonical	2	1425	junction_2	182.168723404931	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACATTTGTTTTTGCTTT	9	True	NA	NA	False	AATAAA	-19	NA	61333105	61299450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_23493.known	chr11	-	3937	25	FSM	ENSG00000167986.15	ENST00000680717.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_23	399.903243506059	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGTACATTTGTTTTTG	-26	True	NA	NA	False	AATAAA	-15	NA	61333140	61299454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61331542_61331692_61332907
transcript_23497.nic	chr11	+	2436	19	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	47.9305052480498	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	-14	True	NA	NA	False	AAAAAG	-4	NA	61333219	61346890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_61333330_61333548_61333651_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_23499.known	chr11	+	4678	18	FSM	ENSG00000149476.16	ENST00000394900.8	4678	18	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	19.433321364058	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGCCAGGCAAGCAG	-6	True	NA	NA	False	NA	NA	NA	61333227	61349242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_23508.known	chr11	-	3205	8	FSM	ENSG00000162144.10	ENST00000426130.6	3205	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	63.5783302834594	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACAAGTGTTTATTTC	-6	True	NA	50	True	AATATA	-17	NA	61362283	61348753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357202_61357372_61357732_61357829_61361732
transcript_23514.known	chr11	-	1803	7	FSM	ENSG00000162144.10	ENST00000447532.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	22.9885237068895	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAGTTTCATTAAATAT	364	False	NA	-34	True	NA	NA	NA	61361913	61348837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_23516.known	chr11	-	1215	7	FSM	ENSG00000167986.15	ENST00000537120.5	1215	7	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_3	173.879268459469	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGGAAACAGAAAAGGATA	73	True	NA	NA	False	NA	NA	NA	61333041	61323757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_23517.known	chr11	-	2584	7	FSM	ENSG00000162144.10	ENST00000294072.9	2584	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	35.9664195234017	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	-5	True	NA	-1	True	ATTAAA	-17	NA	61361882	61348804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_23525.nic	chr11	+	1073	6	FSM	ENSG00000149483.13	ENST00000688279.1	1073	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	65.3250334864055	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGGAGTCTGTCTGTCTA	-18	True	NA	14	True	AATAAA	-21	NA	61362360	61369211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61362421_61364251_61364316_61364432_61364519_61366044_61366217_61367922_61367999_61368596
transcript_2353.nnic	chr1	-	998	7	NNC	ENSG00000001460.18	novel	772	3	NA	NA	-7	-1195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.4774005976342	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTTGTCAGAAGAATTA	-34	True	NA	NA	False	NA	NA	NA	24413789	24370237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_24370481_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_23534.known	chr11	+	1475	5	FSM	ENSG00000149483.13	ENST00000278826.11	1475	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	25.8396497654283	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTCTTATGTCC	-5	True	NA	NA	False	AATAAA	-33	NA	61362373	61369509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368596
transcript_23536.nnic	chr11	+	1261	5	FSM	ENSG00000149483.13	ENST00000451389.7	1233	5	-110	82	79	-82	multi-exon	FALSE	canonical	3	13	junction_4	74.8698871376203	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTATGGAAGTTATATTT	23	True	NA	8	True	AATAAA	-19	NA	61362042	61373410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61373042
transcript_23542.known	chr11	+	1134	4	FSM	ENSG00000149483.13	ENST00000692785.1	1932	4	234	564	1	-168	multi-exon	FALSE	canonical	3	173	junction_1	8.83176086632785	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCCCCACAGCAGCAGT	8	True	NA	NA	False	NA	NA	NA	61362386	61368583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922
transcript_23546.known	chr11	+	611	2	ISM	ENSG00000149483.13	ENST00000534963.5	740	4	17	1755	0	-1755	intron_retention	FALSE	canonical	3	173	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTGCTTAAGCCCAGG	-18	True	NA	NA	False	NA	NA	NA	61362360	61364802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_61362421_61364251
transcript_23553.known	chr11	+	1053	5	FSM	ENSG00000187049.11	ENST00000515837.7	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	168.941372967074	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTTGCAGCCTTTCCT	-12	True	NA	18	True	AATAAA	-17	NA	61392586	61398846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61392666_61393230_61393333_61393883_61393977_61397773_61397976_61398269
transcript_23555.known	chr11	+	908	5	FSM	ENSG00000187049.11	ENST00000398979.7	908	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.760691712869	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATAGGGAGGGGCAAGGT	-7	True	NA	NA	False	NA	NA	NA	61392392	61398493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61392680_61393230_61393333_61393883_61393977_61397773_61397976_61398269
transcript_23588.known	chr11	-	3650	10	FSM	ENSG00000149532.16	ENST00000394888.8	3650	10	0	0	0	0	multi-exon	TRUE	canonical	3	161	junction_5	87.7217824209649	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	NA	False	NA	-6	True	AATAAA	-23	NA	61430031	61402648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_23591.known	chr11	-	3487	10	FSM	ENSG00000149532.16	ENST00000439958.8	3487	10	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	68.9112866814919	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-12	True	NA	-19	True	AATAAA	-18	NA	61429975	61402728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_236.known	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_1	0	6476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_+_1886_2251
transcript_23607.known	chr11	+	555	5	FSM	ENSG00000167985.7	ENST00000359614.9	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	253.0824964315	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAACAAAGAGCAGAG	0	True	NA	NA	False	AATGAA	-31	NA	61430124	61446005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438244_61438343_61445940
transcript_23608.known	chr11	+	559	5	FSM	ENSG00000167985.7	ENST00000537782.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	253.0824964315	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACGTTGAGCTGTGCT	0	True	NA	NA	False	AAAACA	-45	NA	61430124	61446059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438294_61438343_61445940
transcript_23615.known	chr11	+	1077	5	FSM	ENSG00000167985.7	ENST00000542794.5	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	231.050183942796	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTGCCACGAGAGGG	-10	True	NA	104	True	NA	NA	NA	61430041	61446342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61436760_61436961_61437624_61437849_61438003_61438114_61445940
transcript_23619.known	chr11	+	1186	4	FSM	ENSG00000167985.7	ENST00000301761.7	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	47.6188571424762	2527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAATTTCCCAGCCCTC	-1	True	NA	20	True	ATTAAA	-20	NA	61430123	61446733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61445940
transcript_23627.known	chr11	+	438	3	FSM	ENSG00000167985.7	ENST00000543265.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	224.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTATGATGGACGTT	19	True	NA	NA	False	NA	NA	NA	61430143	61446115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61437624_61437849_61445940
transcript_23636.known	chr11	+	835	2	FSM	ENSG00000167985.7	ENST00000542074.1	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAATTATTAAAGCA	-20	True	NA	-16	True	TTTAAA	-19	NA	61430104	61446697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61445940
transcript_23638.known	chr11	-	646	5	FSM	ENSG00000149532.16	ENST00000544990.5	646	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	170.640521272059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGTCTGCCCCCACCAC	7	True	NA	NA	False	NA	NA	NA	61429284	61416368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61416520_61419948_61420095_61420546_61420574_61421389_61421609_61429181
transcript_23639.known	chr11	+	659	4	FSM	ENSG00000167985.7	ENST00000536250.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	238.867234160643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAATTTTTTTCTTTCTT	6	True	NA	NA	False	NA	NA	NA	61430130	61438186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61436760_61436961_61437624_61437849_61438003
transcript_23640.known	chr11	+	1532	14	FSM	ENSG00000162148.11	ENST00000338608.7	1532	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.67770289668022	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGTGACATCACTATCA	0	True	NA	8	True	AATAAA	-16	NA	61481119	61490928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61481217_61481781_61481919_61482310_61482429_61482654_61482809_61484687_61484817_61485337_61485402_61485798_61485912_61486343_61486404_61486523_61486611_61486947_61487062_61487145_61487241_61489781_61489947_61490500_61490585_61490813
transcript_23643.known	chr11	-	1692	4	FSM	ENSG00000134825.16	ENST00000543510.1	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3974.26507531756	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTCTGGGGCCCATT	9424	False	NA	-9	True	AATAAA	-15	NA	61792802	61789130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61791462
transcript_23648.known	chr11	-	578	4	FSM	ENSG00000134825.16	ENST00000537328.6	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	5669	junction_3	1366.53194457925	24363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTCTGGGCCTACCCTT	1	True	NA	NA	False	NA	NA	NA	61792599	61788948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61792555
transcript_23649.known	chr11	-	395	3	FSM	ENSG00000134825.16	ENST00000535297.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	2766.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-16	True	NA	-8	True	AATAAA	-16	NA	61792616	61789129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61790374_61790603_61792555
transcript_23650.known	chr11	-	579	4	FSM	ENSG00000134825.16	ENST00000545210.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3252.30342304582	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	6	True	NA	-8	True	AATAAA	-16	NA	61792594	61789129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789784_61789991_61790374_61790603_61792555
transcript_23651.known	chr11	-	517	4	FSM	ENSG00000134825.16	ENST00000541893.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3267.30840635258	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	9646	False	NA	-8	True	AATAAA	-16	NA	61792580	61789129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789784_61789991_61790422_61790603_61792555
transcript_23652.known	chr11	-	468	4	FSM	ENSG00000134825.16	ENST00000257262.12	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	3593.99446608119	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-1	True	NA	-8	True	AATAAA	-16	NA	61792601	61789129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789715_61789922_61790492_61790603_61792555
transcript_23653.known	chr11	+	2964	12	FSM	ENSG00000134824.14	ENST00000257261.10	2964	12	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	722.075337751145	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	-11	True	NA	20	True	AATAAA	-20	NA	61816255	61867354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61816427_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_23654.known	chr11	+	1689	12	FSM	ENSG00000134824.14	ENST00000522056.5	1689	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	780.532198180635	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGGCCACCGGGGGTG	27	False	NA	NA	False	NA	NA	NA	61816403	61865957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61816697_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_23655.known	chr11	+	3091	12	FSM	ENSG00000134824.14	ENST00000278840.9	3091	12	0	0	0	0	multi-exon	FALSE	canonical	3	2541	junction_10	125.104386166179	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	1	True	NA	20	True	AATAAA	-20	NA	61828299	61867354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_2366.known	chr1	+	694	3	FSM	ENSG00000001461.17	ENST00000475663.2	694	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAGATTGACTCTGACAT	-2	True	NA	NA	False	NA	NA	NA	24415857	24422110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24415905_24419290_24419641_24421813
transcript_23660.known	chr11	-	4364	12	FSM	ENSG00000149485.19	ENST00000350997.12	4364	12	0	0	0	0	multi-exon	TRUE	canonical	3	947	junction_4	63.1223395642629	2502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATTTGTAACCCATG	-7	True	NA	-17	True	AATAAA	-18	NA	61817003	61799626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61816554
transcript_23666.known	chr11	+	1703	10	FSM	ENSG00000134824.14	ENST00000521849.5	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	2609	junction_7	114.114951790825	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGTCTCACCCTGT	173	False	NA	45	True	AATAAA	-8	NA	61828279	61864221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706
transcript_2367.nic	chr1	-	1190	3	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-7	33745	-7	459	5prime_fragment	FALSE	canonical	3	102	junction_1	6	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTCCTTAAACAATGTG	-34	True	NA	NA	False	TTTAAA	-24	NA	24413789	24390743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24391680_24401318_24401457_24413673
transcript_2368.nic	chr1	-	1134	3	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-7	33801	-7	403	5prime_fragment	FALSE	canonical	3	102	junction_1	6	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTTTGTAATGAGCCCT	-34	True	NA	NA	False	ATTAAA	-11	NA	24413789	24390799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24391680_24401318_24401457_24413673
transcript_23684.known	chr11	+	2016	2	FSM	ENSG00000168496.4	ENST00000305885.3	2016	2	0	0	0	0	multi-exon	FALSE	canonical	3	938	junction_1	0	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCATGTTCTTTG	-1	True	NA	25	True	AATAAA	-14	NA	61792910	61797238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61793029_61795340
transcript_23685.known	chr11	+	768	2	FSM	ENSG00000168496.4	ENST00000535307.1	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAACCAAAATGTCATGT	3028	False	NA	19	True	AATAAA	-8	NA	61795939	61797232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61796397_61796921
transcript_23686.known	chr11	+	360	3	FSM	ENSG00000134824.14	ENST00000522639.1	360	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATTTCTGAGAAAATAAT	26	False	NA	9	True	ATTAAA	-22	NA	61816402	61826512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61816427_61826031_61826138_61826282
transcript_23687.known	chr11	-	1790	12	FSM	ENSG00000221968.9	ENST00000278829.7	1790	12	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_4	50.6217540536781	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTGGAGTGGTGAA	9	True	NA	-11	True	ATTAAA	-16	NA	61891545	61873525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_23689.known	chr11	-	2125	9	FSM	ENSG00000167994.13	ENST00000301773.9	2125	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	21.7082933460924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	14	False	NA	-5	True	AATAAA	-18	NA	61920269	61897300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545_61904659_61904753_61904883_61907392_61907471_61907564_61907661_61908053_61908307_61920040
transcript_2369.nic	chr1	-	951	3	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-7	33984	-7	220	5prime_fragment	FALSE	canonical	3	102	junction_1	6	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGTACAAAAATTAG	-34	True	NA	NA	False	AAGAAA	-12	NA	24413789	24390982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24391680_24401318_24401457_24413673
transcript_23691.nic	chr11	-	1377	4	ISM	ENSG00000167994.13	ENST00000394836.7	2325	10	12871	0	7	0	3prime_fragment	FALSE	canonical	3	49	junction_2	3.29983164553722	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGGGTGGCCACGCGC	-4	True	NA	-5	True	AATAAA	-18	NA	61904695	61897300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_61898361_61899313_61899381_61902441_61902542_61904545
transcript_23693.nnic	chr11	-	918	5	NNC	ENSG00000167996.16	novel	825	5	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	8394.46107189139	2476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	5060	False	NA	-46	True	AATAAA	-15	NA	61967694	61964565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967447_61967510
transcript_23694.known	chr11	-	825	5	FSM	ENSG00000167996.16	ENST00000620041.4	825	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	8394.46107189139	2628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	4	True	NA	-46	True	AATAAA	-15	NA	61967631	61964565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967454_61967547
transcript_23695.known	chr11	-	912	4	FSM	ENSG00000167996.16	ENST00000532829.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	216	junction_2	9221.732821017	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	4	True	NA	-46	True	AATAAA	-15	NA	61967631	61964565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61964892_61964986_61965106_61965368_61965516_61967311
transcript_23696.known	chr11	-	983	4	FSM	ENSG00000167996.16	ENST00000534180.1	983	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	8907.06756832273	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	2	True	NA	-46	True	AATAAA	-15	NA	61967633	61964565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965578_61967311
transcript_23697.known	chr11	+	1697	1	FSM	ENSG00000279491.1	ENST00000623785.1	1697	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	17	False	NA	NA	False	AAAACA	-13	NA	61967793	61969490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61967800_61969500
transcript_23698.known	chr11	-	988	2	FSM	ENSG00000285656.1	ENST00000649903.1	988	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTAGGTAGTTTTTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	62123767	62116469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62117347_62123656
transcript_23699.known	chr11	+	3698	18	FSM	ENSG00000149503.13	ENST00000278849.4	3698	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	2.40242092431319	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATCCCTTGAGACCACCT	-30	True	NA	NA	False	NA	NA	NA	62123997	62152752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62124164_62128150_62128302_62128769_62128884_62129781_62130591_62137831_62137884_62138712_62138771_62138887_62139006_62140233_62140286_62140703_62140822_62140912_62141045_62144981_62145092_62145168_62145290_62145628_62145752_62146657_62146903_62148475_62148555_62148738_62148847_62150056_62150208_62151761
transcript_237.nnic	SIRV4	-	960	2	Antisense	novelGene_SIRV4C_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	746	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGCGACTGTACTACT	NA	False	NA	NA	False	NA	NA	NA	2771	1450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_SIRV4_-_1882_2242
transcript_2370.nic	chr1	-	731	3	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-7	34204	-7	0	5prime_fragment	FALSE	canonical	3	102	junction_1	6	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGAGAGGAAATCAC	-34	True	NA	NA	False	ATTAAA	-16	NA	24413789	24391202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24391680_24401318_24401457_24413673
transcript_23700.known	chr11	+	455	3	FSM	ENSG00000124935.4	ENST00000244926.4	455	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGTCTTGTTATAAT	0	True	NA	NA	False	AATAAA	-19	NA	62242238	62244812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62242363_62243288_62243477_62244669
transcript_23705.known	chr11	+	2270	7	FSM	ENSG00000162174.12	ENST00000415229.6	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	103.884016522701	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTGTGGTTGGGAGTC	-17	True	NA	NA	False	AATAAA	-17	NA	62337447	62393412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_23707.known	chr11	+	2182	7	FSM	ENSG00000162174.12	ENST00000301776.9	2182	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	77.2299956119526	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAAGGGTGTGGTTG	-12	True	NA	NA	False	AATAAA	-11	NA	62337452	62393406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_2371.nnic	chr1	-	391	3	NNC	ENSG00000001460.18	novel	455	2	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTTGTTAGTTCCAT	-34	True	NA	NA	False	AATAAA	-17	NA	24413789	24401078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_24401216_24401318_24401457_24413673
transcript_23712.known	chr11	+	1161	6	FSM	ENSG00000162174.12	ENST00000628829.2	1161	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	72.5109646881077	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	28	True	NA	NA	False	NA	NA	NA	62337492	62392568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337966_62338168_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_23719.nic	chr11	+	777	4	ISM	ENSG00000162174.12	ENST00000415229.6	2270	7	-14	36211	-14	0	5prime_fragment	FALSE	canonical	3	75	junction_1	136.948489910948	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	-31	True	NA	15	True	ATTAAA	-16	NA	62337433	62357201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986
transcript_23720.known	chr11	+	639	4	FSM	ENSG00000162174.12	ENST00000534571.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	62.0017920887955	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	30	True	NA	15	True	ATTAAA	-16	NA	62337494	62357201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986
transcript_23721.known	chr11	+	535	4	FSM	ENSG00000162174.12	ENST00000526096.2	535	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	168.06017440852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGTCAAAAGTAAGTCT	38	True	NA	-54	True	AAAAAG	-42	NA	62337502	62357132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337993_62338168_62356324_62356468_62356986
transcript_23723.nic	chr11	+	561	3	ISM	ENSG00000162174.12	ENST00000534183.5	1177	4	-16	32620	-13	5	5prime_fragment	FALSE	canonical	3	30	junction_2	102	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTATCTACAGTTCTT	-30	True	NA	20	True	ATTAAA	-21	NA	62337434	62357206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_62337575_62337966_62338168_62356986
transcript_23726.known	chr11	+	528	2	FSM	ENSG00000162174.12	ENST00000533970.1	528	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	62391896	62392568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62391935_62392078
transcript_23727.known	chr11	+	642	2	FSM	ENSG00000162174.12	ENST00000525708.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGGAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	62391497	62392585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62391633_62392078
transcript_2373.known	chr1	+	931	2	FSM	ENSG00000001461.17	ENST00000488155.1	931	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAGGCAGAGAAACACC	13	True	NA	NA	False	ATTAAA	-12	NA	24415811	24420128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24415905_24419290
transcript_23730.nnic	chr11	-	586	3	NNC	ENSG00000124942.14	novel	1024	6	NA	NA	12056	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	1.5	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTGTGTCAACCTT	NA	False	NA	-5	True	AATAAA	-14	NA	62505301	62433545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_62433892_62491731_62491832_62505161
transcript_23755.known	chr11	-	2705	9	FSM	ENSG00000149016.16	ENST00000476907.6	2705	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	46.3087464740733	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCTCCCGTTTCCTTT	-7	True	NA	NA	False	AATAAA	-17	NA	62591523	62575051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62576245_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
transcript_2376.nic	chr1	+	557	2	ISM	ENSG00000001461.17	ENST00000339255.2	1676	12	48057	0	7705	0	3prime_fragment	FALSE	canonical	3	39	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	NA	False	NA	-18	True	ATTAAA	-1	NA	24463870	24466310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24464121_24466003
transcript_23764.known	chr11	-	1446	10	FSM	ENSG00000254772.10	ENST00000329251.5	1446	10	0	0	0	0	multi-exon	FALSE	canonical	3	6330	junction_9	1461.30642547544	85008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	-3	True	NA	-4	True	ATTAAA	-23	NA	62573891	62559595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573830
transcript_23765.known	chr11	-	2496	9	FSM	ENSG00000254772.10	ENST00000525340.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	9830	junction_8	610.951703799081	9193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCTTTCCTGTCCTGCCT	28	True	NA	-11	True	ATTAAA	-16	NA	62573860	62559602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583
transcript_23766.known	chr11	-	2265	18	FSM	ENSG00000149480.7	ENST00000527204.5	2265	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_17	36.9192516428558	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGGATGCCCAGGGC	-20	True	NA	NA	False	NA	NA	NA	62601275	62593841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62594041_62594258_62594408_62594515_62594635_62594980_62595071_62595263_62595493_62595751_62595892_62596009_62596108_62596278_62596338_62596457_62596533_62596636_62596826_62597315_62597416_62597609_62597713_62598023_62598142_62598326_62598391_62598521_62598640_62600165_62600260_62600621_62600690_62601022
transcript_2377.nic	chr1	+	528	2	ISM	ENSG00000001461.17	ENST00000003912.7	5481	13	48075	3706	7712	2892	3prime_fragment	FALSE	canonical	3	36	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTCTAACTGAGAAC	NA	False	NA	3	True	NA	NA	NA	24463877	24469270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24464121_24468985
transcript_23771.known	chr11	+	862	3	FSM	ENSG00000149489.9	ENST00000534093.5	862	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTGGATGGAAGCAA	NA	False	NA	-7	True	NA	NA	NA	62611785	62615100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62611921_62614257_62614505_62614620
transcript_23772.nic	chr11	+	1096	3	NIC	ENSG00000149489.9	novel	862	3	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	1.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	NA	False	NA	9	True	AATAAA	-15	NA	62611738	62615116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_62612092_62614257_62614505_62614620
transcript_23773.known	chr11	+	1358	3	FSM	ENSG00000149489.9	ENST00000278833.4	1358	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	0	True	NA	9	True	AATAAA	-15	NA	62613256	62615116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62613872_62614257_62614505_62614620
transcript_23776.known	chr11	-	1452	5	FSM	ENSG00000149541.10	ENST00000265471.10	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	46.1112784468182	1215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	-1	True	NA	-27	True	AATAAA	-16	NA	62621986	62615295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_23779.known	chr11	-	3906	25	FSM	ENSG00000089597.18	ENST00000346178.8	3906	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	354.82160766206	7102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTAGTCTGGATTCT	-6	True	NA	80	True	AATAAA	-19	NA	62646615	62624825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_2378.nic	chr1	+	589	2	ISM	ENSG00000001461.17	ENST00000003912.7	5481	13	48075	3645	7712	2953	3prime_fragment	FALSE	canonical	3	36	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCGTTATCTTGGTCTT	NA	False	NA	6	True	AAAAAG	-18	NA	24463877	24469331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24464121_24468985
transcript_23780.known	chr11	-	3835	24	FSM	ENSG00000089597.18	ENST00000356638.8	3835	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	265.873457968587	7135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGGTAGTCTGGAT	-4	True	NA	77	True	AATAAA	-16	NA	62646613	62624828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_23782.known	chr11	-	1320	7	FSM	ENSG00000162194.13	ENST00000354588.8	1818	7	498	0	-4	0	multi-exon	TRUE	canonical	1	1	junction_6	1179.99681025934	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-2	True	NA	-1	True	AATAAA	-16	NA	62671769	62662816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670042_62671563
transcript_23787.known	chr11	+	1368	3	FSM	ENSG00000214756.8	ENST00000398922.6	1368	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	127	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTAGTGGCCTAACCT	-5	True	NA	NA	False	NA	NA	NA	62665308	62667397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665333_62665646_62665947_62666353
transcript_23788.known	chr11	+	2034	3	FSM	ENSG00000214756.8	ENST00000532971.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	116.5	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCAGCCTCAATTTTCT	-2	True	NA	19	True	TATAAA	-33	NA	62665311	62668108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665333_62665646_62665947_62666395
transcript_2379.nic	chr1	-	494	2	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-7	44080	-7	0	5prime_fragment	FALSE	canonical	3	114	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTTGTTAGTTCCAT	-34	True	NA	NA	False	AATAAA	-17	NA	24413789	24401078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24401457_24413673
transcript_23791.known	chr11	+	2870	2	FSM	ENSG00000214756.8	ENST00000529868.1	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTAGCTTCTGTAAC	-1	True	NA	NA	False	NA	NA	NA	62665312	62668496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665333_62665646
transcript_23795.known	chr11	+	376	1	FSM	ENSG00000214756.8	ENST00000594728.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	932	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCGCGTTCTTTT	22	False	NA	12	True	AATAAA	-17	NA	62665335	62665711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665300_62665700
transcript_23796.known	chr11	+	149	1	FSM	ENSG00000206597.1	ENST00000383870.1	149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATCTCGGAGAAGGACAA	-1	True	NA	0	True	NA	NA	NA	62665421	62665570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665400_62665600
transcript_23797.known	chr11	-	646	4	FSM	ENSG00000278615.5	ENST00000524958.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	2187	junction_3	157.319914682012	16870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-7	True	NA	-1	True	AATAAA	-16	NA	62665210	62662816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62665130
transcript_23798.known	chr11	-	774	3	FSM	ENSG00000278615.5	ENST00000532786.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_2	16.5	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	22	True	NA	-1	True	AATAAA	-16	NA	62665181	62662816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663160_62663235_62663334_62664848
transcript_23799.known	chr11	-	2915	5	FSM	ENSG00000162194.13	ENST00000431002.6	2915	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	1246.55505293589	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGTGTGATTAAATGT	2	True	NA	-2	True	AATAAA	-15	NA	62671765	62662817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640
transcript_2380.known	chr1	+	2421	5	FSM	ENSG00000117602.13	ENST00000538532.6	2421	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34.1540627158761	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACCCCTAATTTTTTT	-9	True	NA	NA	False	NA	NA	NA	24502350	24536800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24502464_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_23800.known	chr11	-	405	3	FSM	ENSG00000278615.5	ENST00000525675.1	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	2187	junction_2	158	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGCAAAAGAAGACAAAA	12	True	NA	NA	False	NA	NA	NA	62665191	62663114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663334_62664848_62664974_62665130
transcript_23801.known	chr11	+	1927	2	FSM	ENSG00000204922.5	ENST00000377953.4	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_1	0	4023	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAATTTCTGTGTTGTT	-5	True	NA	NA	False	AATAAA	-20	NA	62671672	62673686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62671866_62671952
transcript_23804.known	chr11	-	943	10	FSM	ENSG00000162191.14	ENST00000534176.1	943	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_9	299.570227138236	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAAATGTCCCAGC	-4	True	NA	-116	True	NA	NA	NA	62679081	62676612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864_62678953_62679038
transcript_23813.known	chr11	-	2073	5	FSM	ENSG00000162191.14	ENST00000532904.5	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_2	104.755369790765	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	19	True	NA	-1	True	AATAAA	-21	NA	62679058	62676497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_23814.known	chr11	-	1257	8	FSM	ENSG00000162191.14	ENST00000525717.5	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	79.6697264092356	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGAGTTCTGTACAT	10	True	NA	-20	True	AATAAA	-2	NA	62679067	62676516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_23815.known	chr11	-	367	4	FSM	ENSG00000162191.14	ENST00000533000.5	367	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	456.641605151738	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGACTCCTTCCTGAA	1292	False	NA	-2	True	AATAAA	-20	NA	62677983	62676498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62677517_62677635_62677780_62677833_62677926
transcript_23816.known	chr11	-	1291	8	FSM	ENSG00000162191.14	ENST00000294119.6	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	80.8520947439817	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	22	True	NA	-1	True	AATAAA	-21	NA	62679055	62676497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_23817.known	chr11	-	1110	9	FSM	ENSG00000162191.14	ENST00000529640.5	1110	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	339.226486841756	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACATGCCTGACTCCTTC	12	True	NA	-7	True	AATAAA	-15	NA	62679065	62676503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677938_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_23818.known	chr11	-	763	8	FSM	ENSG00000162191.14	ENST00000524762.5	763	8	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	351.490586862666	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGACGTTCCGGGCCC	-3	True	NA	NA	False	NA	NA	NA	62679080	62676979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62677006_62677517_62677564_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_2382.known	chr1	+	6863	5	FSM	ENSG00000117602.13	ENST00000374395.9	6863	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	9.75640815054393	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGAGTTGAGTTTTT	-1	True	NA	21	True	AATAAA	-23	NA	24502835	24541040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24503151_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_23824.known	chr11	-	2001	12	FSM	ENSG00000168000.16	ENST00000679883.1	2001	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	134.087056955454	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-13	True	NA	-37	True	AATAAA	-19	NA	62709537	62690274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
transcript_23831.known	chr11	-	1693	11	FSM	ENSG00000168000.16	ENST00000403550.5	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	120.164262574195	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	34	True	NA	-57	True	NA	NA	NA	62706234	62690294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62705915
transcript_23833.known	chr11	-	1516	11	FSM	ENSG00000168000.16	ENST00000407022.7	1516	11	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_10	67.7389105315401	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	8787	False	NA	-57	True	NA	NA	NA	62706344	62690294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_23834.known	chr11	-	1440	11	FSM	ENSG00000168000.16	ENST00000421906.5	1440	11	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_10	123.091226332343	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTTTTTCCTTCAATA	8787	False	NA	-77	True	NA	NA	NA	62706344	62690314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706258
transcript_23853.known	chr11	-	2381	10	FSM	ENSG00000168000.16	ENST00000449636.6	2381	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	134.767655569333	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGCTTACAATATTTC	-4	True	NA	NA	False	NA	NA	NA	62707426	62689288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62707108
transcript_2386.known	chr1	-	426	3	FSM	ENSG00000286061.1	ENST00000652351.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATGCCTAAGTCCCAAGT	5047	False	NA	-9	True	AATAAA	-21	NA	24502382	24496264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24496597_24499652_24499712_24502347
transcript_23861.known	chr11	-	1364	10	FSM	ENSG00000168000.16	ENST00000278893.11	1364	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	133.383416519705	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-3	True	NA	-38	True	AATAAA	-18	NA	62706315	62690275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_2387.known	chr1	-	244	3	FSM	ENSG00000286061.1	ENST00000652371.1	244	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTAAAGAAATATTCTTG	5047	False	NA	NA	False	NA	NA	NA	24502382	24496421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24496597_24499652_24499712_24502372
transcript_2388.known	chr1	-	508	3	FSM	ENSG00000286061.1	ENST00000652048.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCAAGTAGAATATCAGT	5069	False	NA	2	True	AATAAA	-32	NA	24502360	24496253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24496597_24499652_24499805_24502347
transcript_23903.known	chr11	+	864	3	FSM	ENSG00000162188.6	ENST00000294117.6	864	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1.5	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCTCCTGTGTTAGAA	-20	True	NA	4	True	AATAAA	-17	NA	62707675	62709201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62707916_62708294_62708395_62708677
transcript_23909.known	chr11	-	1882	11	FSM	ENSG00000168000.16	ENST00000683296.1	1882	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	140.411680425811	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-1	True	NA	-37	True	AATAAA	-19	NA	62707587	62690274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690732_62690816_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_2391.known	chr1	+	3110	18	FSM	ENSG00000133226.18	ENST00000374389.8	3110	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	519.424481890817	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTGATTTTCTTTT	8	True	NA	NA	False	TTTAAA	-40	NA	24643298	24672626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652927_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_23910.known	chr11	-	512	4	FSM	ENSG00000168000.16	ENST00000470529.5	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	28.3313724811677	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	NA	False	NA	-38	True	AATAAA	-18	NA	62691178	62690275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074
transcript_2393.known	chr1	+	3735	17	FSM	ENSG00000133226.18	ENST00000323848.14	3735	17	0	0	0	0	multi-exon	FALSE	canonical	1	465	junction_6	317.272697917344	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	11	True	NA	39	True	AATAAA	-31	NA	24643301	24673281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_23939.known	chr11	+	858	4	FSM	ENSG00000162222.14	ENST00000532583.1	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	55.5837706129726	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGCTTGAGAAATATA	111	False	NA	9	True	AATACA	-16	NA	62728641	62738603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62728737_62728822_62729087_62735381_62735565_62738287
transcript_23943.nic	chr11	+	970	4	NIC	ENSG00000162222.14	novel	1133	3	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	62.579726926715	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	3663	False	NA	14	True	AATATA	-14	NA	62728053	62738636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_62728228_62728822_62729087_62735381_62735565_62738287
transcript_23958.known	chr11	+	606	3	FSM	ENSG00000162222.14	ENST00000530625.5	606	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	60.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAAGAAGGGCTTTGA	3678	False	NA	NA	False	NA	NA	NA	62728068	62735564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62728228_62728822_62729087_62735381
transcript_23959.known	chr11	+	1133	3	FSM	ENSG00000162222.14	ENST00000316461.9	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	10.5	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	-5	True	NA	14	True	AATATA	-14	NA	62728485	62738636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62729087_62735381_62735565_62738287
transcript_23965.known	chr11	+	346	1	FSM	ENSG00000162222.14	ENST00000601045.1	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGTATTTATTTAATAA	NA	False	NA	NA	False	ATTAAA	-28	NA	62739947	62740293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62739900_62740300
transcript_23966.known	chr11	+	1833	4	FSM	ENSG00000162222.14	ENST00000294161.10	1833	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	16.3095064303001	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTGTTTTTTGGGGCT	3721	False	NA	NA	False	NA	NA	NA	62728111	62736243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62728737_62728822_62729087_62733117_62733200_62735381
transcript_23979.known	chr11	+	791	8	FSM	ENSG00000168002.12	ENST00000301788.12	791	8	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_3	45.0641266441954	14012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	-5	True	NA	20	True	TATAAA	-17	NA	62761579	62766710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761661_62761794_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_23980.known	chr11	+	919	8	FSM	ENSG00000168002.12	ENST00000525455.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	543.038992097967	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTGTTCTAAGTATAA	-5	True	NA	-17	True	NA	NA	NA	62761579	62766673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761661_62761794_62761905_62762541_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_23981.known	chr11	+	710	6	FSM	ENSG00000168002.12	ENST00000526368.1	710	6	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_1	44.5448089007013	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAAGTGTTATCTTCT	1146	False	NA	17	True	TATAAA	-14	NA	62762753	62766707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_23982.known	chr11	+	1556	7	FSM	ENSG00000168002.12	ENST00000531944.5	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	433.803623006232	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	9	False	NA	20	True	TATAAA	-17	NA	62761616	62766710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761661_62761794_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_23983.known	chr11	+	868	7	FSM	ENSG00000168002.12	ENST00000527435.5	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_2	43.2335389355173	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	29	False	NA	20	True	TATAAA	-17	NA	62761636	62766710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_23984.known	chr11	+	1053	8	FSM	ENSG00000168002.12	ENST00000524819.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	454.091512848254	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGGTTCTCATGGAA	-2	True	NA	5	True	TATAAA	-2	NA	62761582	62766695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761661_62761794_62762185_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_23985.known	chr11	+	2023	11	FSM	ENSG00000162227.8	ENST00000294168.8	2023	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	21.1556139121511	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTCTCCACCTTCGTGG	0	True	NA	33	True	AATAAA	-16	NA	62771395	62787342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62771491_62775770_62775931_62776383_62776471_62777977_62778129_62778284_62778336_62778868_62778964_62781893_62781969_62782112_62782334_62782692_62782826_62786259_62786389_62786516
transcript_23988.nnic	chr11	+	813	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	162.244414387676	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	651	False	NA	25	True	NA	NA	NA	62787374	62790246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_62787528_62789125_62789211_62789291_62789427_62789600_62789680_62789885
transcript_23999.known	chr11	-	563	4	FSM	ENSG00000168569.8	ENST00000527073.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGTCAGGGGTCACTGA	7557	False	NA	NA	False	NA	NA	NA	62791743	62771628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62772000_62772076_62772133_62774594_62774666_62791678
transcript_24.known	ERCC-00058	+	1120	1	FSM	ERCC-00058A	DQ459418	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00058_+_0_1100
transcript_240.known	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	2863	junction_1	0	3785	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5158	3637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_4104_5007
transcript_2400.nic	chr1	+	920	7	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-95	19081	-59	0	5prime_fragment	FALSE	canonical	1	465	junction_6	442.043644149911	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	93	False	NA	NA	False	AAAAAG	-5	NA	24643212	24652514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433
transcript_24006.known	chr11	-	487	1	FSM	ENSG00000267811.1	ENST00000596071.1	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTTGATTTTCTTTGTC	NA	False	NA	-1	True	AATAAA	-15	NA	62771606	62771119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62771100_62771600
transcript_24007.known	chr11	+	1043	5	FSM	ENSG00000185475.11	ENST00000333449.9	1043	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	12.2754836971909	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTTGTTACTCCATTC	-8	True	NA	9	True	AATGAA	-20	NA	62787401	62790400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789600_62789680_62789885
transcript_24008.known	chr11	+	797	4	FSM	ENSG00000185475.11	ENST00000533861.5	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	183.637928786209	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	5	True	NA	25	True	NA	NA	NA	62787414	62790246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789885
transcript_2401.known	chr1	+	768	7	FSM	ENSG00000133226.18	ENST00000468822.5	768	7	0	0	0	0	multi-exon	FALSE	canonical	1	105	junction_5	659.536642904193	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	-16	True	NA	NA	False	AAAAAG	-5	NA	24643274	24652514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651498_24651613_24652433
transcript_24010.nic	chr11	-	2276	21	NIC	ENSG00000162231.14	novel	2290	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	34.7456472093988	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	416	False	NA	-10	True	TATAAA	-14	NA	62805468	62792129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_62792515_62792640_62792702_62794257_62794399_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_24011.known	chr11	-	2290	21	FSM	ENSG00000162231.14	ENST00000294172.7	2290	21	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_16	19.1140655016142	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-2	True	NA	-10	True	TATAAA	-14	NA	62805440	62792129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_24013.known	chr11	-	4128	20	FSM	ENSG00000162231.14	ENST00000531709.6	4128	20	0	0	0	0	multi-exon	TRUE	canonical	3	138	junction_15	19.0966342700281	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTGCTGGATTGGTT	414	False	NA	-3	True	TATAAA	-21	NA	62805470	62792122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_24016.known	chr11	-	1785	11	FSM	ENSG00000162236.13	ENST00000377897.8	1785	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.2796917140732	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCATGTCATCATTTCT	17	True	NA	-2	True	NA	NA	NA	62832041	62806896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62807667_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_24019.known	chr11	-	1568	11	FSM	ENSG00000162236.13	ENST00000394690.5	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_10	60.1552159002027	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTACAGCAAGACTGT	16	True	NA	-30	True	NA	NA	NA	62832042	62806924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831111_62831953
transcript_24022.known	chr11	-	1719	11	FSM	ENSG00000162236.13	ENST00000491231.5	1719	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.3663370737772	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGTTTTCTCCCAATTA	16	True	NA	-42	True	NA	NA	NA	62832042	62806936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825024_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_24035.known	chr11	-	934	8	FSM	ENSG00000162236.13	ENST00000431400.2	934	8	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	15.9463385855724	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTGTAAGTGTATGGAA	5664	False	NA	NA	False	AGTAAA	-23	NA	62827631	62823914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560
transcript_24036.known	chr11	-	1339	6	FSM	ENSG00000162236.13	ENST00000677401.1	1339	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	13.3326666499992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCATCCTCATTGTCTT	5914	False	NA	-27	True	NA	NA	NA	62827381	62807519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62825340_62825422_62825540_62827154_62827226_62827342
transcript_24037.known	chr11	-	1366	12	FSM	ENSG00000133316.16	ENST00000529106.5	1366	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	157.371172552069	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACCCTGAGCCTTTT	1653	False	NA	-7	True	AATAAA	-14	NA	62840156	62832911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506_62839660_62840077
transcript_2404.nic	chr1	+	581	5	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-62	2482	-59	0	5prime_fragment	FALSE	canonical	3	1533	junction_1	95.132473425219	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAGAAAGCAGCA	93	False	NA	53	True	GATAAA	-9	NA	24643212	24650032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970
transcript_24042.known	chr11	-	191	1	FSM	ENSG00000222328.1	ENST00000410396.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGGGGAGAGAACAACCG	0	True	NA	-6	True	NA	NA	NA	62841809	62841618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62841600_62841800
transcript_24043.known	chr11	-	1219	11	FSM	ENSG00000133316.16	ENST00000278856.9	1219	11	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_6	26.1543495426669	2609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-4	True	NA	-6	True	AATAAA	-15	NA	62839590	62832910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_24044.known	chr11	-	1153	10	FSM	ENSG00000133316.16	ENST00000311713.11	1153	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	162.955420700885	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	5	True	NA	-6	True	AATAAA	-15	NA	62839581	62832910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62833132_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_24045.known	chr11	+	565	2	FSM	ENSG00000256690.1	ENST00000535817.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGACTGGAGCTTCTA	NA	False	NA	NA	False	NA	NA	NA	62832233	62834043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62832318_62833562
transcript_24046.known	chr11	-	988	8	FSM	ENSG00000133316.16	ENST00000542347.5	988	8	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_4	25.2699708858445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACGGGGTCTGGAGCAT	4	True	NA	NA	False	NA	NA	NA	62839582	62833814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321
transcript_24048.known	chr11	-	1394	11	FSM	ENSG00000255717.8	ENST00000540725.6	1394	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	60.9925405275104	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-5	True	NA	-23	True	AATAAA	-16	NA	62855885	62851987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855746_62855864
transcript_24053.known	chr11	-	780	9	FSM	ENSG00000255717.8	ENST00000542112.5	780	9	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_8	80.7402277368599	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGTAAACTACTGACCT	NA	False	NA	NA	False	NA	NA	NA	62855914	62852257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62855132_62855217_62855864
transcript_2406.known	chr1	+	2314	15	FSM	ENSG00000133226.18	ENST00000596378.1	2314	15	0	0	0	0	multi-exon	FALSE	canonical	1	29	junction_1	586.917201162488	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGCAGTCCCCGTCT	268	False	NA	NA	False	NA	NA	NA	24643558	24669508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643733_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655124_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122
transcript_24060.known	chr11	-	1158	1	FSM	ENSG00000255717.8	ENST00000668048.1	1158	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	595	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	2735	False	NA	-23	True	AATAAA	-16	NA	62853145	62851987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852000_62853100
transcript_24061.known	chr11	-	1117	11	FSM	ENSG00000255717.8	ENST00000689147.1	1162	11	36	9	0	0	multi-exon	FALSE	canonical	3	84	junction_10	39.8096721915667	3436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	-6	True	NA	-22	True	AATAAA	-17	NA	62855886	62851986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_24062.known	chr11	-	897	11	FSM	ENSG00000255717.8	ENST00000541578.6	897	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	56.6428283192144	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	392	False	NA	-23	True	AATAAA	-16	NA	62855488	62851987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852437_62852655_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24063.known	chr11	-	1038	9	ISM	ENSG00000255717.8	ENST00000537869.6	1069	10	425	4	0	0	3prime_fragment	FALSE	canonical	3	36	junction_5	57.7666372138798	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCCTGTTTACTTTTTT	420	False	NA	-26	True	AATAAA	-13	NA	62855460	62851990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24064.known	chr11	-	1202	9	FSM	ENSG00000255717.8	ENST00000663967.1	1202	9	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_8	23.4677305038216	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	513	False	NA	-23	True	AATAAA	-16	NA	62855367	62851987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132
transcript_24065.known	chr11	-	1438	10	FSM	ENSG00000255717.8	ENST00000653690.1	1438	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	41.9588275560286	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	-5	True	NA	-36	True	AATAAA	-3	NA	62855885	62852000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854939_62855132_62855217_62855423_62855467_62855864
transcript_24066.known	chr11	-	1782	9	FSM	ENSG00000255717.8	ENST00000667655.1	1782	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_8	44.4576694733316	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	NA	False	NA	-36	True	AATAAA	-3	NA	62855927	62852000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_24067.known	chr11	-	1513	10	FSM	ENSG00000255717.8	ENST00000658540.1	1513	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_9	26.1958436058513	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-5	True	NA	-23	True	AATAAA	-16	NA	62855885	62851987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24068.known	chr11	-	2336	7	FSM	ENSG00000255717.8	ENST00000661616.1	2336	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_6	26.8850433430105	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	43	False	NA	-25	True	AATAAA	-14	NA	62855837	62851989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24069.known	chr11	-	1689	9	FSM	ENSG00000255717.8	ENST00000544550.6	1689	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	23.3073888498905	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTACATAGTCCTGTTT	43	False	NA	-34	True	AATAAA	-5	NA	62855837	62851998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24070.known	chr11	-	1785	9	FSM	ENSG00000255717.8	ENST00000660547.1	1785	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_8	39.496835316263	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	-6	True	NA	-25	True	AATAAA	-14	NA	62855886	62851989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_24071.known	chr11	-	3771	2	FSM	ENSG00000255717.8	ENST00000656268.1	3771	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTACATAGTCCTGTTT	NA	False	NA	-34	True	AATAAA	-5	NA	62855898	62851998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810
transcript_24073.known	chr11	+	2197	12	FSM	ENSG00000168003.18	ENST00000680725.1	2197	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1089.74353643718	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	3	True	NA	51	True	AATAAA	-41	NA	62856110	62888880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62870744_62870796_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24074.known	chr11	+	1993	10	FSM	ENSG00000168003.18	ENST00000377889.6	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	815.77693029406	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAAGTCTTCCCTCTGC	36	False	NA	24	True	AATAAA	-14	NA	62856143	62888853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_2408.known	chr1	+	673	6	FSM	ENSG00000133226.18	ENST00000490543.5	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	756.441246892315	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	14	True	NA	107	True	AAAAAG	-44	NA	24643304	24650086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24647078_24647209_24648858_24649030_24649970
transcript_24080.known	chr11	+	1413	9	FSM	ENSG00000168003.18	ENST00000536981.6	1413	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	934.087121204441	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-24	True	NA	51	True	AATAAA	-41	NA	62881698	62888880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62881759_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24083.known	chr11	+	2222	12	FSM	ENSG00000168003.18	ENST00000377891.6	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	999.829712773858	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	3	True	NA	31	True	AATAAA	-21	NA	62856110	62888860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24084.known	chr11	+	2084	11	FSM	ENSG00000168003.18	ENST00000535296.5	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_2	712.865548332924	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATAGCAGGAATTTCT	9	True	NA	46	True	AATAAA	-36	NA	62856167	62888875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24085.known	chr11	+	1929	9	FSM	ENSG00000168003.18	ENST00000680610.1	1929	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	873.915890904268	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGGTGAAGTCTTCCCT	6855	False	NA	20	True	AATAAA	-10	NA	62880862	62888849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888112_62888219_62888330
transcript_24086.known	chr11	+	1905	9	FSM	ENSG00000168003.18	ENST00000681657.1	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_2	263.230768528301	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	-2	True	NA	51	True	AATAAA	-41	NA	62880895	62888880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24087.known	chr11	+	1512	8	FSM	ENSG00000168003.18	ENST00000679594.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	2410	junction_1	265.368438521361	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	-24	True	NA	16	True	AATAAA	-6	NA	62881698	62888845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24088.known	chr11	+	552	6	FSM	ENSG00000168003.18	ENST00000537508.6	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1034.42455500631	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTATTTGAATGCCACTG	-24	True	NA	NA	False	NA	NA	NA	62881698	62885314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62881719_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176
transcript_2409.known	chr1	+	2624	4	FSM	ENSG00000133226.18	ENST00000462710.5	2624	4	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	108.603253481038	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	2	True	NA	107	True	AAAAAG	-44	NA	24643292	24650086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24649030_24649970
transcript_24091.known	chr11	+	749	3	FSM	ENSG00000257002.1	ENST00000543624.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	NA	False	NA	16	True	AATAAA	-16	NA	62909545	62918361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62909616_62910602_62910846_62917925
transcript_24093.nnic	chr11	+	1258	3	NNC	ENSG00000257002.1	novel	749	3	NA	NA	-154	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	11	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	NA	False	NA	16	True	AATAAA	-16	NA	62909391	62918361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_62909971_62910602_62910846_62917925
transcript_24099.known	chr11	-	3042	6	FSM	ENSG00000168004.10	ENST00000540857.6	3042	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	15.6792856980157	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-3	True	NA	-2	True	ATTAAA	-16	NA	63491167	63461403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490334_63490886
transcript_24100.known	chr11	-	1166	6	FSM	ENSG00000168004.10	ENST00000301790.4	1166	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	23.0182536261985	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGACCCACAGACTCTC	585	False	63491216	NA	False	AATATA	-6	NA	63491194	63463336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490364_63490886
transcript_24103.nnic	chr11	-	2744	5	NIC	ENSG00000168004.10	novel	3042	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	25.4202183310844	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-21	True	NA	-2	True	ATTAAA	-16	NA	63490975	63461403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_63463596_63466109_63466373_63468356_63468466_63490242_63490334_63490886
transcript_24104.nnic	chr11	-	2834	5	NIC	ENSG00000168004.10	novel	3042	6	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_4	30.2737510064412	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	6	True	NA	-2	True	ATTAAA	-16	NA	63491035	63461403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_63463596_63466109_63466373_63468356_63468466_63490242_63490364_63490886
transcript_24107.known	chr11	-	571	4	FSM	ENSG00000168004.10	ENST00000394615.2	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	35.5058680596133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTACTGACACAAGCAAA	-11	True	NA	NA	False	NA	NA	NA	63490965	63463475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63490886
transcript_24108.known	chr11	-	2599	4	FSM	ENSG00000168004.10	ENST00000536887.5	2599	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	32.7448045073142	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	15	True	NA	-2	True	ATTAAA	-16	NA	63490939	63461403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63463596_63466109_63466373_63490242_63490334_63490886
transcript_24111.nnic	chr11	-	686	4	NNC	ENSG00000168004.10	novel	2599	4	NA	NA	50	-22384	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.9920619917784	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTTATGCTTTGTTTT	662	False	NA	NA	False	AATAAA	-16	NA	63491117	63488529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_63488788_63488870_63488977_63490242_63490334_63490886
transcript_24118.nnic	chr11	+	479	2	NNC	ENSG00000287412.1	novel	335	2	NA	NA	-4934	-1	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCAGTGAATTGGT	NA	False	NA	8	True	ATTAAA	-15	NA	63490549	63500609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63490821_63500401
transcript_24119.nnic	chr11	+	479	2	NNC	ENSG00000287412.1	novel	335	2	NA	NA	-4815	-1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	132	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCAGTGAATTGGT	NA	False	NA	8	True	ATTAAA	-15	NA	63490668	63500609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63490940_63500401
transcript_2412.known	chr1	+	2723	7	FSM	ENSG00000169504.15	ENST00000488683.1	2723	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	1093.70188148122	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGATTCTTTTTTCCC	23	True	NA	13	True	AATAAA	-17	NA	24745381	24844267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772_24842588_24844128
transcript_24120.known	chr11	+	1425	9	FSM	ENSG00000133317.16	ENST00000340246.10	1425	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.06088896120033	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTCTCATCTAGCAA	18	False	NA	10	True	AATAAA	-20	NA	63506362	63516774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63506528_63508552_63508642_63508774_63508992_63509777_63509898_63510462_63510502_63511078_63511106_63511751_63511841_63515562_63515714_63516246
transcript_24125.known	chr11	+	1667	8	FSM	ENSG00000133317.16	ENST00000255684.10	1667	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	8.7458444942937	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTCGTTCTCAT	-30	True	NA	3	True	AATAAA	-13	NA	63506083	63516767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63506528_63508552_63508642_63508777_63508992_63509777_63509898_63510462_63510502_63511751_63511841_63515562_63515714_63516246
transcript_2413.known	chr1	+	4253	6	FSM	ENSG00000169504.15	ENST00000374379.9	4253	6	0	0	0	0	multi-exon	FALSE	canonical	3	2705	junction_2	131.424503042621	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAGACTACTATTTT	0	True	NA	16	True	AATAAA	-19	NA	24745446	24844321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772
transcript_24130.nnic	chr11	+	875	4	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7389	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	8.83176086632785	310	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTACCATGTTTTTA	8483	False	NA	9	True	AATAAA	-23	NA	63529418	63546462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63529602_63539515_63539625_63544620_63544890_63546148
transcript_24131.nnic	chr11	+	718	3	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7359	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	25	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTACCATGTTTTTA	8513	False	NA	9	True	AATAAA	-23	NA	63529448	63546462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63529584_63544620_63544890_63546148
transcript_24133.known	chr11	+	758	4	FSM	ENSG00000133321.11	ENST00000255688.8	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	13.8884444373331	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	-3	True	NA	5	True	AATAAA	-19	NA	63536807	63546458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63536878_63539515_63539625_63544620_63544890_63546148
transcript_2414.known	chr1	-	1757	7	FSM	ENSG00000117614.10	ENST00000236273.9	1757	7	0	0	0	0	multi-exon	TRUE	canonical	3	504	junction_6	73.432508695627	3108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGATATTTTAAATTCAA	-1	True	NA	NA	False	ATTAAA	-15	NA	25232502	25222275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25228997_25229124_25232103_25232212_25232443
transcript_24140.known	chr11	-	678	4	FSM	ENSG00000176485.13	ENST00000394613.3	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	554.885173306654	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATAAGGCTTATTTT	385	False	NA	1	True	NA	NA	NA	63614158	63574849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598114_63613999
transcript_24147.known	chr11	-	1920	13	FSM	ENSG00000184743.13	ENST00000538786.1	1920	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	41.8372342138754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGGTTCATATCCAGAG	62	False	NA	-96	True	NA	NA	NA	63671909	63629252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671635
transcript_2415.known	chr1	-	926	6	FSM	ENSG00000117614.10	ENST00000354361.3	926	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	258.087272061216	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTTGGGCTTAAGA	-6	True	NA	18	True	TTTAAA	-23	NA	25232486	25222964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25232103_25232212_25232443
transcript_24150.known	chr11	-	6899	13	FSM	ENSG00000184743.13	ENST00000398868.8	6899	13	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_7	10.8384603252594	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATCTGTGTTTTCTTTC	35	True	NA	-11	True	AATAAA	-14	NA	63671376	63624086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
transcript_24151.known	chr11	+	2645	8	FSM	ENSG00000133318.14	ENST00000356000.7	2645	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1057.73213305927	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCATCATTCTGC	-1	True	NA	44	True	AATAAA	-21	NA	63681449	63759891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63704850_63704908_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_24156.known	chr11	+	814	2	FSM	ENSG00000133318.14	ENST00000538995.1	814	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCCTTTTTTTC	4	True	NA	NA	False	AATATA	-28	NA	63681473	63714479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63713970
transcript_24157.known	chr11	+	4886	8	FSM	ENSG00000133318.14	ENST00000339997.8	4886	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1035.03358912271	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCATCATTCTGC	13	False	NA	44	True	AATAAA	-21	NA	63681482	63759891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63718701_63721033_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_24158.known	chr11	+	2532	7	FSM	ENSG00000133318.14	ENST00000537981.5	2532	7	0	0	0	0	multi-exon	FALSE	canonical	3	2108	junction_6	115.511062481286	2891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGACTGTGGCATCA	-1	True	NA	38	True	AATAAA	-15	NA	63681499	63759885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_24159.known	chr11	+	2524	6	FSM	ENSG00000133318.14	ENST00000341307.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	927.957197288754	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACAATGACTGTGGCA	-5	True	NA	35	True	AATAAA	-12	NA	63681445	63759882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63758155
transcript_2416.known	chr1	-	438	2	FSM	ENSG00000117614.10	ENST00000474160.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGGAAAAGAAAAAGGTT	3826	False	NA	NA	False	AAAAAG	-25	NA	25232432	25229014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25229124_25232103
transcript_24160.known	chr11	+	1407	4	FSM	ENSG00000133318.14	ENST00000354497.4	1407	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1048.44784748164	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAAAAATAACCTGCA	72	False	NA	-24	True	AATAAA	-36	NA	63681572	63759089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63749990_63750199_63756111_63756171_63758155
transcript_24161.nnic	chr11	-	854	2	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTCTCTGAGTCTC	NA	False	NA	-10	True	AATAAA	-20	NA	63813346	63770956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr11_-_63771184_63812719
transcript_24162.known	chr11	+	1954	6	FSM	ENSG00000168005.9	ENST00000294244.9	1954	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	7.19444229944198	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCGTCTGGGCCATCA	1	True	NA	27	True	AATAAA	-18	NA	63813455	63827716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63813814_63817804_63818135_63818215_63818366_63818526_63818653_63818801_63819003_63826927
transcript_24164.known	chr11	-	2915	12	FSM	ENSG00000167771.6	ENST00000301459.5	2915	12	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	15.2440206405415	2483	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTACTGAGTTTTCTTTCC	-3	True	NA	-14	True	AATAAA	-7	NA	63917164	63911229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63912180_63912304_63912535_63912675_63912734_63912869_63912948_63913953_63914170_63914260_63914331_63914416_63914542_63914654_63914817_63914901_63914955_63915177_63915259_63915554_63915612_63916329
transcript_2417.known	chr1	-	1962	2	FSM	ENSG00000117614.10	ENST00000476231.1	1962	2	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAGACTCT	-1	True	NA	NA	False	AATAGA	-25	NA	25232502	25230308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25232212_25232443
transcript_24172.known	chr11	+	3649	8	FSM	ENSG00000110583.13	ENST00000377793.9	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_2	27.3167362917434	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	8	True	NA	14	True	AATAAA	-15	NA	63939001	63957319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_24177.nnic	chr11	+	1031	8	Fusion	ENSG00000176340.4_ENSG00000110583.13	novel	3649	8	NA	NA	-2	0	multi-exon	FALSE	canonical	0	0	junction_7	64.7664564226809	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATTCATTGTGCC	NA	False	NA	48	True	AATAAA	-17	NA	63938956	63976543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63976224
transcript_24178.known	chr11	+	1035	8	FSM	ENSG00000110583.13	ENST00000542163.1	1035	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	64.6390290894956	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTTTCCTCTTTCCTGGT	0	True	NA	NA	False	NA	NA	NA	63939247	63954519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63939535_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_24181.known	chr11	+	4707	7	FSM	ENSG00000110583.13	ENST00000338447.10	4707	7	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_2	24.6672297233034	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	NA	False	NA	14	True	AATAAA	-15	NA	63938958	63957319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63939103_63945839_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_24182.known	chr11	+	577	5	FSM	ENSG00000110583.13	ENST00000539656.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	64.9629702215039	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGCCAGGCTGCGCCCT	8	True	NA	NA	False	NA	NA	NA	63939001	63954586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63953971_63954050_63954337
transcript_24184.nnic	chr11	+	891	3	NNC	ENSG00000110583.13	novel	4707	7	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	NA	False	NA	14	True	AATAAA	-15	NA	63938956	63957319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63939103_63945839_63946222_63956956
transcript_24187.known	chr11	-	1257	11	FSM	ENSG00000133315.12	ENST00000255681.7	1257	11	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	23.4486673395313	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	12	True	NA	-8	True	AATAAA	-16	NA	64166113	63998557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_24189.known	chr11	-	1214	10	FSM	ENSG00000133315.12	ENST00000675777.1	1214	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	68.6990215036252	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCAGCTCCTACTGTC	12	True	NA	-16	True	AATAAA	-8	NA	64166113	63998565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63998688_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_2419.known	chr1	+	2814	10	FSM	ENSG00000187010.21	ENST00000328664.9	2814	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGTTTTCACTTACATAA	-1	True	NA	NA	False	AATAAA	-22	NA	25272508	25330445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25272696_25284572_25284760_25290640_25290792_25300945_25301094_25301519_25301687_25303321_25303460_25306595_25306730_25316999_25317080_25321888_25321963_25328897
transcript_24190.known	chr11	-	459	5	FSM	ENSG00000133315.12	ENST00000542359.5	459	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	97.1004634386469	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCATCTAAATCATGAC	350	False	NA	-10	True	AATAAA	-19	NA	64165775	64009012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64009144_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_24192.nnic	chr11	-	397	4	NNC	ENSG00000133315.12	novel	1257	11	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	97.9841256984461	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	NA	False	NA	-8	True	AATAAA	-16	NA	63999440	63998557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_63998688_63998837_63998873_63998954_63999077_63999330
transcript_24193.known	chr11	-	868	4	FSM	ENSG00000133315.12	ENST00000538595.1	868	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	108.788275512065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGCTTTTCGGGGCTGC	68	False	NA	NA	False	AATAAA	-15	NA	64166057	64148746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64149035_64151238_64151356_64152291_64152394_64165696
transcript_24195.known	chr11	-	431	3	FSM	ENSG00000133315.12	ENST00000542105.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	16	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTACTGTCTGAGCT	NA	False	NA	-10	True	AATAAA	-14	NA	63999222	63998559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63998688_63998837_63998873_63998954
transcript_24196.known	chr11	-	230	4	FSM	ENSG00000133315.12	ENST00000541041.1	230	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	94.2479000650235	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTTGTGGCAGCTCCTAC	NA	False	NA	-20	True	AATAAA	-4	NA	63999361	63998569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63998688_63998837_63998873_63998954_63999001_63999330
transcript_24201.known	chr11	+	1259	7	FSM	ENSG00000167770.13	ENST00000543988.1	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	713.030153640083	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTCGTTGGGTTC	5	True	NA	NA	False	NA	NA	NA	63986841	63997850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63987039_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_24220.known	chr11	+	494	2	FSM	ENSG00000176340.4	ENST00000314133.4	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	3016	junction_1	0	20219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATTCATTGTGCC	14	True	NA	48	True	AATAAA	-17	NA	63974619	63976543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63974795_63976224
transcript_24221.known	chr11	+	553	4	FSM	ENSG00000167770.13	ENST00000536443.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	1088.23741282253	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGTGGAAACAGTAT	34	False	NA	NA	False	AATAAA	-37	NA	63986468	63990632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63990286
transcript_24222.known	chr11	+	1701	7	FSM	ENSG00000167770.13	ENST00000538426.6	1701	7	0	0	0	0	multi-exon	FALSE	canonical	3	1737	junction_4	226.761744765048	5057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	3	True	NA	26	True	AATAAA	-18	NA	63986437	63998412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_24223.known	chr11	+	2315	2	FSM	ENSG00000167770.13	ENST00000447683.2	2315	2	0	0	0	0	multi-exon	FALSE	canonical	3	2341	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAATAAAT	14	True	NA	NA	False	NA	NA	NA	63986448	63990585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63986515_63988336
transcript_24226.known	chr11	+	2140	14	FSM	ENSG00000168439.17	ENST00000305218.9	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	2474	junction_8	241.276143691814	3766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTGGCCTTGAGTG	-18	True	NA	37	True	AATAAA	-25	NA	64186170	64204543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_24233.nic	chr11	-	976	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	117.717232972813	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCGTTTGAAACCATGT	8120	False	NA	-33	True	AATAAA	-43	NA	64226259	64223832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_64223968_64224099_64224163_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_24241.known	chr11	-	968	8	FSM	ENSG00000149743.14	ENST00000317459.11	968	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	96.3497031968571	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATCATCCTGTAGCT	-13	True	NA	-16	True	TATAAA	-45	NA	64226186	64223815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_24244.nic	chr11	-	895	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_7	91.6225620551566	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCGTTTGAAACCATGT	8108	False	NA	-33	True	AATAAA	-43	NA	64226271	64223832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226190
transcript_24263.known	chr11	-	865	7	FSM	ENSG00000149743.14	ENST00000394547.7	865	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	104.007611900925	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATCTGGTCTTCCTTG	23	True	NA	1	True	AAAAAG	-45	NA	64226150	64223798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64226049
transcript_24278.known	chr11	-	941	7	FSM	ENSG00000149743.14	ENST00000541278.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	127.500871456717	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACATCTGGTCTTCCTT	8125	False	NA	0	True	AAAAAG	-44	NA	64226254	64223799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_24279.nic	chr11	+	1006	6	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	52	junction_1	113.92032303325	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	-4	True	NA	44	True	AATAAA	-17	NA	64226247	64230016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_64226298_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_24281.known	chr11	+	1110	6	FSM	ENSG00000149761.9	ENST00000279206.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_3	46.8299049753467	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	-13	True	NA	44	True	AATAAA	-17	NA	64226273	64230016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64226428_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_24285.nic	chr11	+	1360	6	FSM	ENSG00000110011.14	ENST00000628077.3	1130	6	-230	0	40	0	multi-exon	FALSE	canonical	3	147	junction_1	25.8642610565235	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	-7	True	NA	19	True	AATAAA	-13	NA	64230317	64234281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64230941_64231870_64231965_64232429_64232615_64232703_64232866_64233893_64233981_64234072
transcript_2429.known	chr1	-	970	2	FSM	ENSG00000117616.18	ENST00000450820.2	970	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGGTGAAACCCCTTC	NA	False	NA	NA	False	NA	NA	NA	25267885	25253113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25253938_25267739
transcript_24298.known	chr11	-	1726	6	FSM	ENSG00000149743.14	ENST00000539436.5	1726	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	104.878977874501	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	8150	False	NA	-30	True	TATAAA	-31	NA	64226229	64223829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224718_64224800_64225581_64225785_64225870_64226049
transcript_24308.nic	chr11	+	907	5	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	153.569202641676	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	-4	True	NA	44	True	AATAAA	-17	NA	64226247	64230016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_64226298_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_24318.known	chr11	+	986	5	FSM	ENSG00000149761.9	ENST00000441250.6	986	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	125.835954718832	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGATTCCGTTGGCA	3	True	NA	35	True	AATAAA	-8	NA	64226289	64230007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64226428_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_2432.known	chr1	+	485	1	FSM	ENSG00000272432.1	ENST00000607698.1	485	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTGAAAATTGTGGGT	NA	False	NA	-4	True	AATAAA	-10	NA	25247836	25248321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25247800_25248300
transcript_24322.known	chr11	+	1015	5	FSM	ENSG00000110011.14	ENST00000321460.5	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	71.6955368206418	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	26	False	NA	19	True	AATAAA	-13	NA	64230757	64234281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64230941_64231870_64231965_64232429_64232615_64232700_64232866_64233893
transcript_2433.known	chr1	-	2941	4	FSM	ENSG00000117616.18	ENST00000498238.1	2941	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	13.0724477007517	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	0	True	NA	-19	True	AATAAA	-20	NA	25247454	25242248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25245302_25246443_25247030_25247308
transcript_2434.known	chr1	-	1425	5	FSM	ENSG00000117616.18	ENST00000243189.12	1425	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	40.7208484685671	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	0	True	NA	-19	True	AATAAA	-20	NA	25247454	25242248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25243634_25245149_25245302_25246443_25247030_25247308
transcript_24342.known	chr11	+	1071	3	FSM	ENSG00000149761.9	ENST00000535000.1	1071	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	157.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTCTGAAAATAATAAACGA	3	True	NA	11	True	NA	NA	NA	64226289	64229983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64227133_64229477_64229572_64229849
transcript_24344.known	chr11	+	759	3	FSM	ENSG00000110011.14	ENST00000355040.8	759	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	73.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCACCTGGATGGGGC	13	True	NA	-78	True	NA	NA	NA	64230566	64234184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64230941_64231870_64231965_64233893
transcript_24347.known	chr11	-	923	2	FSM	ENSG00000256116.1	ENST00000534988.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATCAATGCCACTGCCCA	9194	False	NA	NA	False	NA	NA	NA	64234292	64229213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64230038_64234193
transcript_24349.known	chr11	-	495	3	FSM	ENSG00000149743.14	ENST00000541928.1	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	21	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAAGAACTCGTTTG	9710	False	NA	-42	True	AATAAA	-34	NA	64224669	64223841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224342_64224542
transcript_2435.known	chr1	-	824	5	FSM	ENSG00000117616.18	ENST00000566395.5	824	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.3374857486678	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	953	False	NA	-25	True	AATAAA	-14	NA	25246535	25242254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25243634_25244453_25244499_25245149_25245302_25246443
transcript_24350.known	chr11	-	684	6	FSM	ENSG00000149743.14	ENST00000546089.5	684	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	109.168860028856	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGTAACAAGAAA	8509	False	NA	-53	True	AATAAA	-23	NA	64225870	64223852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785
transcript_24351.known	chr11	+	1805	7	FSM	ENSG00000173511.10	ENST00000309422.7	1805	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_5	12.9196233175223	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTTCAGCATCTGCTGC	-25	True	NA	NA	False	AATAGA	-29	NA	64234583	64239264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64234894_64235457_64235501_64235812_64236010_64236253_64236328_64237186_64237223_64237419_64237656_64238355
transcript_24352.known	chr11	+	1704	7	FSM	ENSG00000173511.10	ENST00000426086.3	1704	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	48.6095555306659	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTTCAGCATCTGCTGC	-25	True	NA	NA	False	AATAGA	-29	NA	64234583	64239264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64234894_64235457_64235501_64235812_64236010_64236253_64236328_64237186_64237223_64237520_64237656_64238355
transcript_2436.known	chr1	-	2013	5	FSM	ENSG00000117616.18	ENST00000568254.5	2013	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	46.1546314035764	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-3	True	NA	-25	True	AATAAA	-14	NA	25247457	25242254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25244225_25245149_25245302_25246443_25247030_25247308
transcript_24362.known	chr11	+	574	6	FSM	ENSG00000173486.14	ENST00000309366.9	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	159.457831416334	8824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	11	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_24364.nnic	chr11	+	683	6	NNC	ENSG00000173486.14	novel	574	6	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	110	junction_1	357.319688794222	869	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	-4	True	NA	18	True	AAAACA	-39	NA	64240950	64244132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_64241133_64242418_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_24367.known	chr11	+	613	6	FSM	ENSG00000173486.14	ENST00000449942.6	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	380.521747078928	1971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGGAGTAAGCCTGTG	72	False	NA	12	True	AAAACA	-33	NA	64241155	64244126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241239_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_2437.known	chr1	-	3034	6	FSM	ENSG00000117616.18	ENST00000473314.6	3034	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.5711380136931	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAGTCTTTATTGTAT	192	False	NA	-26	True	AATAAA	-13	NA	25338165	25242255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25244225_25244453_25244499_25245149_25245302_25246443_25247030_25337039
transcript_24370.known	chr11	+	1655	6	FSM	ENSG00000286264.2	ENST00000652762.2	1655	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	356.141320264863	2777	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	11	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64242214_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_24377.known	chr11	+	611	6	FSM	ENSG00000173486.14	ENST00000652094.1	611	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	399.432397283946	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAAGGAGTAAGCCTG	32	True	NA	10	True	AAAACA	-31	NA	64241664	64244124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241748_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_24385.known	chr11	+	705	5	FSM	ENSG00000173486.14	ENST00000541388.1	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	175.095688125093	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAAAAACACTTA	-10	True	NA	-11	True	AAAACA	-10	NA	64241073	64244103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241133_64242383_64242559_64243198_64243498_64243840_64243877_64243967
transcript_24395.known	chr11	+	637	4	FSM	ENSG00000173486.14	ENST00000536642.5	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	180.913116040699	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTAGTGGCCCCACTCT	14	True	NA	NA	False	NA	NA	NA	64241002	64243669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450
transcript_24406.nnic	chr11	-	1086	7	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-5649	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_6	2210.69740127409	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	NA	False	NA	-22	True	AATAAA	-27	NA	64252592	64244479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64246581_64248049_64248173_64248400_64248599_64252452
transcript_24408.nnic	chr11	-	1113	6	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-1822	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_4	2159.54139575976	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	3807	False	NA	-22	True	AATAAA	-27	NA	64248765	64244479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64246581_64248049_64248173_64248400
transcript_24415.nnic	chr11	-	545	4	NNC	ENSG00000173457.11	novel	600	4	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2115.5019892845	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	-6	True	NA	-22	True	AATAAA	-27	NA	64245754	64244479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64245669
transcript_24416.known	chr11	-	600	4	FSM	ENSG00000173457.11	ENST00000392210.6	600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2115.5019892845	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	2	True	NA	-22	True	AATAAA	-27	NA	64246193	64244479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246053
transcript_24418.known	chr11	-	989	4	FSM	ENSG00000173457.11	ENST00000309318.8	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	4372	junction_1	91.0396738912339	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGCTGGTCTCTTT	-12	True	NA	-21	True	AATAAA	-28	NA	64246943	64244478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415
transcript_24424.nic	chr11	-	824	3	ISM	ENSG00000257086.1	ENST00000545800.1	853	4	-219	938	-219	-938	5prime_fragment	FALSE	canonical	3	42	junction_2	31	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCGCCGTCGGCTTA	2859	False	NA	NA	False	AATAAA	-15	NA	64249713	64247876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_64248173_64248400_64248599_64249383
transcript_24426.nnic	chr11	-	634	3	NNC	ENSG00000257086.1	novel	853	4	NA	NA	-3098	-938	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_2	33.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCGCCGTCGGCTTA	NA	False	NA	NA	False	AATAAA	-15	NA	64252592	64247876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64248173_64248400_64248599_64252452
transcript_24427.known	chr11	+	391	2	FSM	ENSG00000256940.3	ENST00000544553.2	413	2	22	0	8	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCACAGAGGTTAATTA	6	True	NA	25	True	ATTAAA	-29	NA	64245963	64248217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64246090_64247952
transcript_24429.known	chr11	+	533	2	FSM	ENSG00000256940.3	ENST00000663760.2	551	2	5	13	5	-13	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTGGAAAGTTCAATTAC	3	True	NA	5	True	ATTAAA	-9	NA	64245960	64248197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64246249_64247952
transcript_2443.known	chr1	+	965	5	FSM	ENSG00000183726.11	ENST00000491936.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	462.020291762169	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCATGGTCCAGCCAC	-2	True	NA	NA	False	NA	NA	NA	25338319	25361265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25338457_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_24431.known	chr11	+	431	2	FSM	ENSG00000256940.3	ENST00000538355.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGATTAAATAGGAAAA	995	False	NA	-15	True	AATGAA	-39	NA	64247053	64248177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64247260_64247952
transcript_24433.nic	chr11	-	661	2	ISM	ENSG00000257086.1	ENST00000545800.1	853	4	729	938	729	-938	internal_fragment	FALSE	canonical	3	104	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATGCGCCGTCGGCTTA	3807	False	NA	NA	False	AATAAA	-15	NA	64248765	64247876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_64248173_64248400
transcript_24434.known	chr11	-	853	4	FSM	ENSG00000257086.1	ENST00000545800.1	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	27.0102861065105	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAAGCGCTTCGGCGGC	3078	False	NA	NA	False	NA	NA	NA	64249494	64246938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64247360_64248049_64248173_64248400_64248599_64249383
transcript_24451.known	chr11	+	1478	7	FSM	ENSG00000173264.15	ENST00000377702.8	1478	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	80.3839743564184	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	9	True	NA	15	True	AATAAA	-19	NA	64285256	64289494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288339_64288469_64288602_64288722_64289036
transcript_24453.known	chr11	+	2166	7	FSM	ENSG00000173264.15	ENST00000438980.7	2166	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	13.2245562832516	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	-30	True	NA	15	True	AATAAA	-19	NA	64285847	64289494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_24454.known	chr11	+	1485	7	FSM	ENSG00000173264.15	ENST00000313074.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	47.1616605117146	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	210	False	NA	12	True	AATAAA	-16	NA	64286419	64289491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_2446.known	chr1	+	2266	7	FSM	ENSG00000183726.11	ENST00000374358.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_5	90.4537942205239	2348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTCTTTAATTTTT	12	True	NA	29	True	ATTAAA	-17	NA	25338333	25362361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_24464.known	chr11	-	1157	3	FSM	ENSG00000002330.14	ENST00000394532.7	1157	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	2.5	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	477	False	NA	-3	True	AATAAA	-19	NA	64284639	64269829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64270338_64271612_64271804_64284181
transcript_24466.known	chr11	-	929	4	FSM	ENSG00000002330.14	ENST00000309032.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	62.9655990733565	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	25	True	NA	-3	True	AATAAA	-19	NA	64284665	64269829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64270338_64271612_64271804_64284181_64284377_64284630
transcript_24467.known	chr11	+	1843	7	FSM	ENSG00000173264.15	ENST00000539851.5	1843	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	84.2504533453019	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTGTCATCTGCCT	5	True	NA	21	True	AATAAA	-25	NA	64284810	64289500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64285263_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64289036
transcript_24468.known	chr11	+	780	5	FSM	ENSG00000219435.6	ENST00000328404.8	780	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.12132034355964	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGAGTCAGTGCAGGAC	-16	True	NA	15	True	AATAAA	-16	NA	64300357	64304770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64300432_64300656_64300988_64303481_64303562_64303772_64303840_64304542
transcript_2447.known	chr1	+	776	6	FSM	ENSG00000183726.11	ENST00000498135.5	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	414.450769090854	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGAAATTACA	-5	True	NA	-22	True	NA	NA	NA	25338316	25360967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25338457_25340473_25340580_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_24470.known	chr11	+	2283	7	FSM	ENSG00000173153.17	ENST00000405666.5	2283	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	87.6863095864394	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGGTGTCATTG	17	False	NA	20	True	AATATA	-19	NA	64306226	64316743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
transcript_24481.known	chr11	-	561	4	FSM	ENSG00000173113.7	ENST00000308774.6	561	4	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_2	1975.4257487663	28535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGTTTCTCTTTGCA	-9	True	NA	-88	True	ATTAAA	-12	NA	64317558	64316694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64316969_64317057_64317133_64317263_64317366_64317448
transcript_24482.known	chr11	-	823	3	FSM	ENSG00000173113.7	ENST00000535750.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	4264	junction_1	73.5	2470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTATTGCTTCAAGG	586	False	NA	63	True	GGGGCT	-10	NA	64317487	64316459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64316969_64317057_64317148_64317263
transcript_24483.known	chr11	-	704	2	FSM	ENSG00000173113.7	ENST00000535126.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	4411	junction_1	0	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	563	False	NA	-84	True	ATTAAA	-16	NA	64317510	64316690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64317148_64317263
transcript_24484.known	chr11	-	659	3	FSM	ENSG00000173113.7	ENST00000539854.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	4253	junction_2	79	2066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGCGGTTTCTCTTTGC	-4	True	NA	-89	True	ATTAAA	-11	NA	64317553	64316695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64317148_64317263_64317366_64317448
transcript_24485.known	chr11	-	559	2	FSM	ENSG00000173113.7	ENST00000537918.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	4264	junction_1	0	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGTTTCTCTTTGCAG	732	False	NA	-87	True	ATTAAA	-13	NA	64317341	64316693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64316969_64317057
transcript_2449.known	chr1	+	3940	11	FSM	ENSG00000204178.11	ENST00000374343.5	3940	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	11.1193524991341	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTTCTGCCTTTTTAA	-5	True	NA	NA	False	AATAAA	-20	NA	25430896	25500209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25431179_25446761_25446904_25448807_25448935_25454258_25454383_25456652_25456832_25458390_25458893_25484115_25484275_25485612_25485796_25489172_25489294_25491409_25491585_25498263
transcript_24504.nnic	chr11	+	750	5	NIC	ENSG00000126432.14	novel	860	6	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	288	junction_1	1371.03254884777	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	-82	True	NA	26	True	AATAAA	-20	NA	64318095	64321811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_64318387_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_24510.known	chr11	+	463	4	FSM	ENSG00000126432.14	ENST00000347941.4	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	1533.21803914367	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGGGGCCCTGCAA	4	True	NA	-43	True	NA	NA	NA	64318181	64321742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64318387_64320864_64320904_64321006_64321069_64321585
transcript_24514.known	chr11	+	860	6	FSM	ENSG00000126432.14	ENST00000265462.9	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	2847	junction_3	304.306030173574	35758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	-57	True	NA	26	True	AATAAA	-20	NA	64318120	64321811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64318387_64319733_64319869_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_24515.known	chr11	+	596	5	FSM	ENSG00000126432.14	ENST00000352435.8	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	1429.73467818333	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCTGGGGCCCTGC	4	True	NA	-45	True	NA	NA	NA	64318181	64321740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64318387_64319733_64319869_64320864_64320904_64321006_64321069_64321585
transcript_24516.nnic	chr11	-	771	4	NNC	ENSG00000236935.2	novel	563	3	NA	NA	-670	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTAGGCTTCTTCCT	1888	False	NA	2	True	AATAAA	-18	NA	64340797	64325049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64325332_64327483_64327537_64339899_64340079_64340540
transcript_24517.nic	chr11	+	1145	3	ISM	ENSG00000168071.22	ENST00000301897.5	870	4	1097	8	-531	0	3prime_fragment	FALSE	canonical	3	60	junction_2	4.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGAGTCTTGCTCTG	1913	False	NA	12	True	AATAAA	-12	NA	64354811	64357525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_64355401_64355559_64355629_64357038
transcript_24518.known	chr11	+	779	2	FSM	ENSG00000168071.22	ENST00000472524.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTGCTCTGTCTGTT	29	False	NA	18	True	AATAAA	-18	NA	64355342	64357531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64355629_64357038
transcript_24519.known	chr11	+	2909	7	FSM	ENSG00000168071.22	ENST00000494566.5	2909	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.9828947294336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAAAAAAAACCCT	1796	False	NA	NA	False	NA	NA	NA	64342730	64350695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64342808_64343178_64343331_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550
transcript_24520.known	chr11	-	985	2	FSM	ENSG00000231680.1	ENST00000457725.1	985	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGTGTCATGCACCTGT	0	True	NA	NA	False	AATAAA	-31	NA	64395831	64394341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64394700_64395204
transcript_24521.known	chr11	-	2983	16	FSM	ENSG00000068831.19	ENST00000377494.5	2983	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	66.8966034680054	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	9866	False	NA	-2	True	AATAAA	-24	NA	64743789	64726910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64727132_64727295_64727364_64728862_64729043_64729761_64729799_64730052_64730195_64735111_64735228_64735541_64735665_64735902_64735981_64736752_64737035_64739359_64739477_64739635_64739810_64740012_64740164_64740947_64741080_64741438_64741502_64742009_64742113_64742793
transcript_24523.nic	chr11	-	744	5	ISM	ENSG00000068831.19	ENST00000421556.5	2168	17	13829	0	4973	0	3prime_fragment	FALSE	canonical	3	42	junction_4	5.49431524395898	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	NA	False	NA	-2	True	AATAAA	-24	NA	64730293	64726910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761_64729799_64730052
transcript_24528.known	chr11	-	583	5	FSM	ENSG00000068831.19	ENST00000377489.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	87.505356978873	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	10	True	NA	-2	True	AATAAA	-17	NA	64745333	64740865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64745274
transcript_24529.nic	chr11	-	677	4	ISM	ENSG00000068831.19	ENST00000421556.5	2168	17	14150	0	5294	0	3prime_fragment	FALSE	canonical	3	46	junction_1	4.78423336480244	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	NA	False	NA	-2	True	AATAAA	-24	NA	64729972	64726910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761
transcript_24530.known	chr11	-	444	4	FSM	ENSG00000068831.19	ENST00000394428.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	97.3527377917825	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9557	False	NA	-2	True	AATAAA	-17	NA	64742937	64740865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742033_64742793
transcript_24531.known	chr11	-	2174	4	FSM	ENSG00000068831.19	ENST00000394430.5	2174	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_3	21.013223349966	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGTGAGGGTCATGTTG	9066	False	NA	-4	True	AATAAA	-15	NA	64744589	64740867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793
transcript_24534.known	chr11	-	453	3	FSM	ENSG00000068831.19	ENST00000394429.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	105.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	9557	False	NA	-2	True	AATAAA	-17	NA	64742937	64740865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741534_64742793
transcript_24537.known	chr11	-	667	5	FSM	ENSG00000068831.19	ENST00000377486.7	667	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	85.8119309886452	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-15	True	NA	-2	True	AATAAA	-17	NA	64744145	64740865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744002
transcript_24538.known	chr11	-	2866	20	FSM	ENSG00000068976.14	ENST00000164139.4	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	5.6037185912447	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTACTCCTCTTTGT	-3	True	NA	-9	True	AATAAA	-17	NA	64759974	64746397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64746809_64746920_64746988_64747223_64747359_64750375_64750584_64751324_64751467_64751596_64751656_64751923_64752072_64752402_64752505_64753072_64753188_64753518_64753683_64753878_64754026_64754252_64754346_64754692_64754837_64755272_64755356_64755446_64755559_64757778_64757911_64758245_64758350_64758436_64758516_64758602_64758705_64759655
transcript_2454.known	chr1	+	2914	9	FSM	ENSG00000157978.12	ENST00000374338.5	2914	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_8	10.8563057713018	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACGCTCATCAGGTGGAG	-29	True	NA	10	True	AATAAA	-22	NA	25543605	25568886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25543787_25553921_25554065_25554859_25554973_25557152_25557268_25562643_25562717_25563069_25563154_25563660_25563792_25565172_25565208_25566847
transcript_24543.known	chr11	-	2854	13	FSM	ENSG00000168066.21	ENST00000377394.7	2854	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	274.999128786499	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	363	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_24544.known	chr11	-	3282	13	FSM	ENSG00000168066.21	ENST00000377390.8	3282	13	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	144.805113284488	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-10	True	NA	-22	True	AATAAA	-22	NA	64778542	64764605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_24555.known	chr11	-	983	2	FSM	ENSG00000168066.21	ENST00000463343.1	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	865	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATGACAAAA	8	True	NA	NA	False	NA	NA	NA	64778763	64776045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64776627_64778361
transcript_24556.known	chr11	-	7147	32	FSM	ENSG00000168067.12	ENST00000294066.7	7147	32	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_18	13.7687909628465	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACCTGTCTTTGTTGGAT	7519	False	64803239	NA	False	AATAAA	-18	NA	64803214	64784917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64789625_64789729_64789786_64789888_64789960_64790187_64790275_64790393_64790463_64791908_64792087_64792171_64792276_64792363_64792423_64796272_64796391_64796492_64796554_64796633_64796714_64796808_64796894_64796981_64797024_64797103_64797193_64797274_64797381_64797500_64797535_64797625_64797665_64798793_64798838_64799420_64799480_64799604_64799684_64800108_64800217_64800310_64800393_64800763_64800827_64800899_64801032_64801110_64801184_64801578_64801622_64801709_64801758_64802065_64802122_64802418_64802484_64802562_64802654_64802884_64802943_64803053
transcript_24563.known	chr11	-	752	4	FSM	ENSG00000149735.7	ENST00000279168.7	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	4.78423336480244	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTTTATTAAGTCT	-1	True	NA	-4	True	AATAAA	-17	NA	64935893	64934470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64934875_64934990_64935176_64935357_64935461_64935833
transcript_24567.known	chr11	-	2066	3	FSM	ENSG00000168062.10	ENST00000301887.9	2066	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTGCCTAGTTACTT	-1	True	NA	-1	True	AATAAA	-17	NA	64996971	64987944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64989813_64994447_64994550_64996875
transcript_24570.known	chr11	+	1908	8	FSM	ENSG00000110025.13	ENST00000377244.8	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_6	38.186438451794	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTAATTCATTTAGTA	-19	True	NA	16	True	AATAAA	-17	NA	65027438	65040572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65038571_65038830_65039685
transcript_24573.known	chr11	+	771	7	FSM	ENSG00000110025.13	ENST00000352068.5	771	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	98.5045120229976	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGAGTGGGCCATTCCCT	9	False	NA	NA	False	NA	NA	NA	65027537	65039792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65039685
transcript_24581.known	chr11	+	932	5	FSM	ENSG00000213465.8	ENST00000246747.9	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	3062	junction_4	164.746775385742	17868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	16	True	NA	18	True	AATAAA	-17	NA	65014159	65022184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720
transcript_24582.known	chr11	+	795	4	FSM	ENSG00000213465.8	ENST00000533729.1	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	1552.79754708147	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAACCGCTCCTTGCC	-18	True	NA	-6	True	NA	NA	NA	65014191	65022160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65021720
transcript_24583.known	chr11	+	830	6	FSM	ENSG00000213465.8	ENST00000529384.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	1271.76548152558	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	36	True	NA	18	True	AATAAA	-17	NA	65014179	65022184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720_65021889_65021970
transcript_24584.known	chr11	+	1228	3	FSM	ENSG00000213465.8	ENST00000524585.1	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	3424	junction_1	32.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCCCCCATATACCCTT	27	True	NA	-80	True	AAAAAG	-32	NA	65014170	65019585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65014273_65018363_65018475_65018570
transcript_2459.known	chr1	+	1217	7	FSM	ENSG00000117640.18	ENST00000524618.5	1217	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	87.2257607208635	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGGCTTGTGATTTGAC	15	True	NA	-55	True	NA	NA	NA	25819985	25832211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820030_25823018_25823129_25823620_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_24592.known	chr11	-	495	6	FSM	ENSG00000168060.16	ENST00000533842.5	495	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.30479294709987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTAGTCACATTCCCGGG	26	False	NA	NA	False	NA	NA	NA	65047861	65045429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646_65047739_65047841
transcript_24595.known	chr11	-	635	5	FSM	ENSG00000168060.16	ENST00000532450.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.75925291729789	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTCCTTTTATTACCTG	155	False	NA	NA	False	AATAAA	-29	NA	65047732	65044817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65045012_65045821_65045915_65046026_65046115_65046188_65046363_65047646
transcript_24599.known	chr11	-	800	5	FSM	ENSG00000168060.16	ENST00000526516.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	6.51920240520265	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCACCCTGAGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	65047937	65045303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646
transcript_2460.known	chr1	+	1953	7	FSM	ENSG00000117640.18	ENST00000374303.7	1953	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	25.0826411864638	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	-17	True	NA	13	True	ATTAAA	-21	NA	25819953	25832938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_24600.nic	chr11	-	1399	5	NIC	ENSG00000168060.16	novel	2708	18	NA	NA	0	0	intron_retention	TRUE	canonical	1	1	junction_4	7.58287544405155	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTCCTTTTATTACCTG	1	True	NA	NA	False	AATAAA	-29	NA	65047886	65044817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046527_65047646
transcript_24601.known	chr11	-	566	4	FSM	ENSG00000168060.16	ENST00000532802.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.78888096369861	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGCGGCAGCCACCCT	1	True	NA	NA	False	NA	NA	NA	65047886	65045312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65047646
transcript_24604.known	chr11	+	755	3	FSM	ENSG00000168061.17	ENST00000533017.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGGCAGAGGAGGAAGA	19	True	NA	NA	False	NA	NA	NA	65040940	65044673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65041107_65043024_65043165_65044224
transcript_24605.nnic	chr11	+	807	2	NIC	ENSG00000168061.17	novel	1563	2	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCACTAGATGTGATTT	-18	True	NA	20	True	AATAAA	-21	NA	65040903	65044828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65041107_65044224
transcript_24606.known	chr11	+	1261	2	FSM	ENSG00000168061.17	ENST00000652489.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCACTAGATGTGATTT	-19	True	NA	20	True	AATAAA	-21	NA	65041209	65044828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65041867_65044224
transcript_24611.known	chr11	-	692	6	FSM	ENSG00000146670.10	ENST00000527430.1	692	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	194.401646083566	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCGGCCATGAATGCCGAG	5152	False	NA	NA	False	NA	NA	NA	65083977	65079165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65079188_65079352_65079788_65083363_65083400_65083484_65083551_65083628_65083717_65083932
transcript_24614.known	chr11	-	1012	5	FSM	ENSG00000146670.10	ENST00000404147.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	35.2845575287547	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCAGACTCTCCCTCCT	17	True	NA	NA	False	NA	NA	NA	65084047	65079087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65079788_65083363_65083400_65083484_65083551_65083628_65083724_65083932
transcript_24618.nic	chr11	-	424	3	ISM	ENSG00000146670.10	ENST00000525464.1	672	7	12481	-65	12455	0	3prime_fragment	FALSE	canonical	3	5	junction_1	2.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCTTCACCAAGTGT	NA	False	NA	-11	True	AATAAA	-13	NA	65066934	65066299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_65066474_65066551_65066680_65066812
transcript_2462.known	chr1	+	1868	7	FSM	ENSG00000117640.18	ENST00000374307.9	1868	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	83.9880943943843	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	32	True	NA	13	True	ATTAAA	-21	NA	25820002	25832938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829544_25829831_25831920
transcript_24620.nic	chr11	-	502	2	ISM	ENSG00000146670.10	ENST00000529290.5	789	6	12455	0	12455	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCTTCACCAAGTGT	NA	False	NA	-11	True	AATAAA	-13	NA	65066934	65066299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_65066680_65066812
transcript_24624.known	chr11	+	1382	8	FSM	ENSG00000162300.13	ENST00000294258.8	1382	8	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_6	19.7411824801425	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	-4	True	NA	12	True	AATAAA	-18	NA	65084221	65088398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65084379_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_24630.known	chr11	+	2094	8	FSM	ENSG00000149809.17	ENST00000530650.5	2094	8	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	24.0874257992143	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	29	False	NA	20	True	AATGAA	-15	NA	65111901	65116230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_24634.known	chr11	+	2551	7	FSM	ENSG00000162300.13	ENST00000650243.1	2551	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	83.2401145281929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTATTAAAACACCCGA	-16	True	NA	-1	True	AATAAA	-5	NA	65084209	65088385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65084361_65084690_65084801_65085114_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_2464.known	chr1	+	1873	7	FSM	ENSG00000117640.18	ENST00000474295.5	1873	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_5	82.8869712319132	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCCATCTCTTG	3486	False	NA	17	True	ATTAAA	-25	NA	25819928	25832942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
transcript_24648.known	chr11	+	384	2	FSM	ENSG00000162300.13	ENST00000526791.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACGAAAGGATGAGTCTC	24	False	NA	NA	False	AATAAA	-16	NA	65084289	65085003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65084361_65084690
transcript_24649.known	chr11	+	426	2	FSM	ENSG00000149823.9	ENST00000528050.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGCCCCCATTCTCCC	-10	True	NA	NA	False	NA	NA	NA	65096213	65097158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65096479_65096997
transcript_24651.known	chr11	+	2661	10	FSM	ENSG00000149823.9	ENST00000279281.8	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_3	34.0449956439278	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTCCTTGTCTGCGTTCC	-10	True	NA	27	True	NA	NA	NA	65096213	65111862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65096479_65096997_65097128_65107580_65107728_65107802_65108023_65108196_65108915_65109279_65109496_65109704_65109924_65110481_65110604_65110693_65110782_65111326
transcript_24652.known	chr11	-	1299	1	FSM	ENSG00000174276.7	ENST00000310597.6	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTGCTTGTTTCTGA	-17	True	NA	-8	True	AATAAA	-15	NA	65117701	65116402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65116400_65117700
transcript_24653.known	chr11	-	3048	16	FSM	ENSG00000162298.19	ENST00000294256.12	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	33.8602356098648	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-10	True	NA	-29	True	AATAAA	-16	NA	65134532	65127278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_24654.known	chr11	-	3038	16	FSM	ENSG00000162298.19	ENST00000377190.8	3038	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	31.2761179745114	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	3	True	NA	-29	True	AATAAA	-16	NA	65134519	65127278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130176_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_24659.known	chr11	-	507	5	FSM	ENSG00000149806.11	ENST00000526555.5	507	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2973.57246212363	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGTACAACCGGCGCT	8188	False	NA	33	True	NA	NA	NA	65122113	65120756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65121940
transcript_24660.known	chr11	-	538	5	FSM	ENSG00000149806.11	ENST00000527548.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2973.57246212363	4454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	8188	False	NA	-5	True	AATAAA	-20	NA	65122113	65120630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122035
transcript_24662.known	chr11	+	2065	4	FSM	ENSG00000149792.9	ENST00000524482.5	2065	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	334.799774326222	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGAAACTGTCTCCAA	1425	False	NA	19	True	ATTAAA	-29	NA	65122182	65127356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65122341_65124501_65124653_65125487_65125613_65125725
transcript_24664.known	chr11	+	518	3	FSM	ENSG00000149792.9	ENST00000534078.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	364.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTGCTTGCATAAAGGA	-14	True	NA	NA	False	NA	NA	NA	65122310	65126004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65122425_65125487_65125613_65125725
transcript_24665.known	chr11	+	688	3	FSM	ENSG00000149792.9	ENST00000533943.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	375.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGAGTGCAGTGGCAT	30	False	NA	NA	False	NA	NA	NA	65122354	65126178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65122465_65125487_65125613_65125725
transcript_24667.known	chr11	-	1484	1	FSM	ENSG00000149806.11	ENST00000531357.1	1484	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCGCATTGTTTCATCT	8184	False	NA	-8	True	AATAAA	-17	NA	65122117	65120633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120600_65122100
transcript_24668.known	chr11	-	506	5	FSM	ENSG00000149806.11	ENST00000529639.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	5849	junction_4	460.759427467306	79720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-3	True	NA	-4	True	AATAAA	-21	NA	65122134	65120629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
transcript_24669.known	chr11	-	461	4	FSM	ENSG00000149806.11	ENST00000279259.7	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	83	junction_1	3024.34018515701	2919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCATCGCATTGTTTC	8148	False	NA	-12	True	AATAAA	-13	NA	65122153	65120637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65121499_65121645_65121738_65121822_65122089
transcript_24670.known	chr11	-	697	4	FSM	ENSG00000149806.11	ENST00000531743.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	6623	junction_2	167.453476125958	6924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	8244	False	NA	-4	True	AATAAA	-21	NA	65122057	65120629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738
transcript_24671.known	chr11	-	355	4	FSM	ENSG00000149806.11	ENST00000525297.5	355	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3204.49853938005	3299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	8480	False	NA	-5	True	AATAAA	-20	NA	65121821	65120630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121540_65121738
transcript_24672.known	chr11	+	2026	4	FSM	ENSG00000149792.9	ENST00000279242.7	2026	4	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_2	23.2713462342761	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAACTCTTGTAACAC	-4	True	NA	34	True	ATTAAA	-44	NA	65122320	65127371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65122425_65124501_65124653_65125487_65125613_65125725
transcript_24673.known	chr11	+	991	7	FSM	ENSG00000204710.2	ENST00000377185.2	991	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGGCCCACTGACTGAC	NA	False	NA	NA	False	NA	NA	NA	65170153	65173244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65170262_65171326_65171500_65171942_65172002_65172245_65172332_65172433_65172606_65172683_65173015_65173182
transcript_24676.known	chr11	+	3083	22	FSM	ENSG00000014216.16	ENST00000533820.5	3083	22	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	175.287286056523	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	NA	False	NA	26	True	AATAAA	-22	NA	65181193	65212006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65181411_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_24677.known	chr11	+	2960	22	FSM	ENSG00000014216.16	ENST00000524773.5	2960	22	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	187.010470561873	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	28	False	NA	21	True	AATAAA	-17	NA	65181744	65212001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65181844_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_24680.nic	chr11	+	2990	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	3	54	junction_1	182.756309003891	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	383	False	NA	26	True	AATAAA	-22	NA	65182417	65212006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65182542_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_24693.known	chr11	+	2952	22	FSM	ENSG00000014216.16	ENST00000279247.11	2952	22	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	103.806356439229	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	-24	True	NA	26	True	AATAAA	-22	NA	65181927	65212006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_24694.known	chr11	+	3086	21	FSM	ENSG00000014216.16	ENST00000527323.5	3086	21	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	58.4202661753608	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	12	True	NA	7	True	AATAAA	-3	NA	65182461	65211987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_247.known	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2931.04131453311	7791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
transcript_24703.nic	chr11	+	1711	5	ISM	ENSG00000197847.12	ENST00000525264.5	1419	6	-7	1660	1	528	5prime_fragment	FALSE	canonical	2	8	junction_3	5.67340285895511	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATGGTTAATCA	3804	False	NA	NA	False	NA	NA	NA	65213840	65224380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_65214254_65214325_65214430_65217534_65217689_65222472_65222597_65223464
transcript_24711.known	chr11	+	3544	18	FSM	ENSG00000014138.9	ENST00000265465.8	3544	18	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	13.6878194532249	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGCTGTTTTATTTCA	-8	True	NA	20	True	AGTAAA	-21	NA	65261961	65298685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65297119
transcript_24718.nnic	chr11	+	1758	3	NNC	ENSG00000149798.5	novel	1963	2	NA	NA	-51	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	28	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCTGTTTACTGAGCAT	2236	False	NA	114	True	NA	NA	NA	65314814	65322527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65314955_65320543_65321316_65321681
transcript_24719.known	chr11	+	1963	2	FSM	ENSG00000149798.5	ENST00000279249.3	1963	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCAAGGGACCAACAGC	2	True	NA	4	True	AATAAA	-15	NA	65314865	65322417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65314955_65320543
transcript_24721.known	chr11	+	2462	12	FSM	ENSG00000133884.10	ENST00000252268.8	2462	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	302.002736564691	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGGATGGTTTATCT	5	True	NA	18	True	AATAAA	-18	NA	65333866	65352983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65344579_65344622_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_24722.known	chr11	+	3714	11	FSM	ENSG00000133884.10	ENST00000528416.6	3714	11	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_4	94.8791336385404	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCCCAAGCATGCAG	-10	True	NA	3	True	AATAAA	-18	NA	65333851	65354262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_24725.known	chr11	+	940	4	FSM	ENSG00000133884.10	ENST00000444314.6	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_1	52.7825728815866	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACTAGGGAAGCTGAG	-10	True	NA	NA	False	ATTAAA	-39	NA	65333851	65342002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398
transcript_24727.nic	chr11	+	1433	3	ISM	ENSG00000133884.10	ENST00000444314.6	940	4	-58	-110	-58	110	intron_retention	FALSE	canonical	3	796	junction_1	13.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAACCAGAAGGTGCAAG	NA	False	NA	NA	False	NA	NA	NA	65333793	65342112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_65333919_65340384_65340546_65340965
transcript_24730.known	chr11	+	366	2	FSM	ENSG00000126391.14	ENST00000531296.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGAAGTCAGAGGCTC	-19	True	NA	NA	False	AAGAAA	-28	NA	65386620	65387261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65386762_65387036
transcript_24732.known	chr11	+	844	3	FSM	ENSG00000173727.13	ENST00000619960.4	844	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATAGCGCCGCGTGTTT	11	True	NA	NA	False	AATGAA	-7	NA	65455257	65456318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65455332_65455436_65455582_65455693
transcript_24735.known	chr11	+	1519	2	FSM	ENSG00000251562.9	ENST00000508832.2	1519	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTTTTATTAGAGAATGT	3	False	NA	7	True	AATAAA	-1	NA	65501847	65503609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65502394_65502636
transcript_24739.known	chr11	+	584	2	FSM	ENSG00000251562.9	ENST00000610851.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGTGGTTCTTTTGTG	32	False	NA	15	True	AATAAA	-17	NA	65504518	65506468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65505020_65506385
transcript_2474.known	chr1	-	517	4	FSM	ENSG00000228172.5	ENST00000453649.1	517	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGAAAGTTTGTGTAAAA	920	False	NA	NA	False	TATAAA	-17	NA	25819743	25816749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25816881_25817561_25817714_25818222_25818425_25819711
transcript_24740.known	chr11	+	8708	1	FSM	ENSG00000251562.9	ENST00000534336.1	8708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113836	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGGTTCTTTTGTGA	9	True	NA	16	True	AATAAA	-18	NA	65497761	65506469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65497800_65506500
transcript_24741.known	chr11	+	95	1	FSM	ENSG00000278217.1	ENST00000618249.1	95	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTACATTAATCCTGGA	303	False	NA	-10	True	AATAAA	-22	NA	65502913	65503008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65502900_65503000
transcript_24742.known	chr11	+	394	2	FSM	ENSG00000251562.9	ENST00000617791.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGACAAGCTAGGAA	-2	True	NA	28	True	GATAAA	-28	NA	65499041	65499785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65499339_65499688
transcript_24743.known	chr11	+	352	2	FSM	ENSG00000251562.9	ENST00000620902.1	352	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAGGGAAATTAGAAGA	-2	True	NA	4	True	AATAGA	-2	NA	65499041	65499706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65499306_65499618
transcript_24744.known	chr11	+	2636	18	FSM	ENSG00000142186.18	ENST00000270176.10	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_13	41.6216273299314	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-19	True	NA	28	True	AATAAA	-13	NA	65525082	65538704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_24745.known	chr11	+	2583	18	FSM	ENSG00000142186.18	ENST00000420247.6	2583	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_13	63.8618751709189	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	-17	True	NA	28	True	AATAAA	-13	NA	65525084	65538704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_24746.known	chr11	+	2586	17	FSM	ENSG00000142186.18	ENST00000527009.5	2586	17	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_12	42.7832016538033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAGCCACAATAAATTC	311	False	NA	-1	True	NA	NA	NA	65525412	65538675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_2475.known	chr1	-	435	4	FSM	ENSG00000228172.5	ENST00000442055.5	435	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAGTTTGTGTAAAAA	891	False	NA	NA	False	TATAAA	-18	NA	25819772	25816748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25816881_25817561_25817714_25818402_25818425_25819643
transcript_24752.known	chr11	-	1942	1	FSM	ENSG00000260233.3	ENST00000623234.1	1942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGCCATTT	-4	True	NA	NA	False	NA	NA	NA	65570423	65568481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65568500_65570400
transcript_24753.known	chr11	-	614	1	FSM	ENSG00000260233.3	ENST00000567594.1	614	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGACCTTGGTGCTTTTT	7277	False	NA	-5	True	NA	NA	NA	65570273	65569659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65569700_65570300
transcript_24755.known	chr11	-	445	3	FSM	ENSG00000173338.13	ENST00000525254.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGCAACGACTTCGG	6061	False	NA	NA	False	NA	NA	NA	65593519	65592868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65593196_65593309_65593384_65593475
transcript_24756.nic	chr11	-	850	2	ISM	ENSG00000173338.13	ENST00000340313.5	1121	3	1850	0	-431	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAATGGGACTTCCCTG	5630	False	NA	NA	False	CATAAA	-31	NA	65593950	65592835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_65593211_65593475
transcript_24757.known	chr11	-	5605	1	FSM	ENSG00000173327.8	ENST00000527304.1	5605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGGAAAAGA	-2	True	NA	NA	False	NA	NA	NA	65614236	65608631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65608600_65614200
transcript_24758.nic	chr11	+	1003	2	ISM	ENSG00000197136.5	ENST00000439247.2	3104	15	9508	-134	5950	0	3prime_fragment	FALSE	canonical	3	150	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCAGTTTCTTTTTCTA	-1	True	NA	7	True	NA	NA	NA	65636360	65637439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_65636690_65636765
transcript_24761.known	chr11	+	548	2	FSM	ENSG00000213445.10	ENST00000528699.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTGAACATGTGTC	2876	False	NA	31	True	AGTAAA	-14	NA	65650281	65650918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65650480_65650568
transcript_24763.known	chr11	-	2517	11	FSM	ENSG00000173039.20	ENST00000406246.8	2517	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	11.0833208019979	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGATCCGCTTTTTTTC	-2	True	NA	-12	True	AATAAA	-17	NA	65662916	65653600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_24764.known	chr11	-	3183	10	FSM	ENSG00000173039.20	ENST00000525693.5	3183	10	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_1	11.2853012671952	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGATCCGCTTTTTTTC	966	False	NA	-12	True	AATAAA	-17	NA	65662895	65653600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_24767.known	chr11	+	824	5	FSM	ENSG00000285533.3	ENST00000648185.2	909	5	83	2	8	-2	multi-exon	FALSE	canonical	2	3	junction_2	13.865424623862	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	0	True	NA	12	True	AATAAA	-17	NA	65663085	65671716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130_65666218_65671422
transcript_24768.nnic	chr11	+	817	5	NNC	ENSG00000285533.3	novel	909	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	13.3229125944742	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	-18	True	NA	12	True	AATAAA	-17	NA	65663067	65671716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65663149_65663426_65663684_65665445_65665544_65666130_65666218_65671422
transcript_2477.known	chr1	-	1392	4	FSM	ENSG00000127423.11	ENST00000538789.5	1392	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	92.5718939827611	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAATAGCTTGAGTACT	-50	True	NA	NA	False	AATAAA	-18	NA	25859458	25831912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25832159_25835021_25835847_25837412_25837555_25859279
transcript_24770.nnic	chr11	+	647	4	NIC	ENSG00000285533.3	novel	909	5	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	10.4243305140746	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	-4	True	NA	12	True	AATAAA	-17	NA	65663005	65671716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65663149_65665420_65665544_65666130_65666218_65671422
transcript_24771.nnic	chr11	+	622	4	NNC	ENSG00000285533.3	novel	2628	4	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	13.1402688962847	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	-4	True	NA	12	True	AATAAA	-17	NA	65663005	65671716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65663149_65665445_65665544_65666130_65666218_65671422
transcript_24773.known	chr11	+	1697	4	FSM	ENSG00000285533.3	ENST00000654110.1	1697	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	10.9645894689324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGGTTTCCATATT	-4	True	NA	NA	False	NA	NA	NA	65663005	65667304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130
transcript_24776.nnic	chr11	+	783	4	NNC	ENSG00000285533.3	novel	909	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	1.24721912892465	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTCTGTTCTGG	7	True	NA	14	True	AATAAA	-19	NA	65663016	65671718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65663149_65663426_65663684_65665445_65665544_65671422
transcript_24779.nnic	chr11	+	497	3	NIC	ENSG00000285533.3	novel	1697	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTCCCACCAACGCC	-4	True	NA	NA	False	AATAAA	-13	NA	65663005	65666361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65663149_65665420_65665544_65666130
transcript_24780.nnic	chr11	+	500	3	NIC	ENSG00000285533.3	novel	909	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTCTGTTCTGG	-18	True	NA	14	True	AATAAA	-19	NA	65663067	65671718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65663149_65665420_65665544_65671422
transcript_24785.nnic	chr11	+	755	2	FSM	ENSG00000285533.3	ENST00000692111.1	711	2	-44	0	-44	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTCTGTTCTGG	139	False	NA	14	True	AATAAA	-19	NA	65663224	65671718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663684_65671422
transcript_24787.known	chr11	+	2237	14	FSM	ENSG00000172977.13	ENST00000377046.7	2237	14	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_5	92.7274430695943	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	-23	True	NA	25	True	AATAAA	-17	NA	65711995	65719604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_24791.known	chr11	+	2059	13	FSM	ENSG00000172977.13	ENST00000352980.8	2059	13	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	53.1467439161506	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	-1	True	NA	25	True	AATAAA	-17	NA	65712017	65719604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_2480.known	chr1	-	2161	3	FSM	ENSG00000127423.11	ENST00000374298.4	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	7	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGTGATAATTGGTAA	-49	True	NA	-12	True	AATAAA	-14	NA	25859457	25834005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25835847_25837412_25837555_25859279
transcript_24804.known	chr11	+	2080	13	FSM	ENSG00000172977.13	ENST00000341318.9	2080	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	93.8516855942869	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	6	True	NA	25	True	AATAAA	-17	NA	65712251	65719604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_24805.known	chr11	-	2645	4	FSM	ENSG00000172922.11	ENST00000308418.10	2645	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	39.9694327649962	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATCAGGTAAAGCCTC	11	True	NA	-5	True	AATAAA	-21	NA	65720798	65717672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65719810_65720044_65720165_65720241_65720418_65720586
transcript_24806.known	chr11	-	2085	5	FSM	ENSG00000172922.11	ENST00000531596.6	2085	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	156.160774524206	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	11	True	NA	-41	True	NA	NA	NA	65720798	65717708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65719157_65719680_65719810_65720044_65720165_65720241_65720418_65720586
transcript_24807.known	chr11	-	2798	3	FSM	ENSG00000172922.11	ENST00000528220.2	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	8.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-9	True	NA	-41	True	NA	NA	NA	65720818	65717708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65719810_65720044_65720165_65720241
transcript_24808.known	chr11	-	1082	5	FSM	ENSG00000172922.11	ENST00000646597.1	1082	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	189.84516717578	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGGCTTGACTGGTCA	-21	True	NA	NA	False	AATAAA	-16	NA	65720526	65715000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65715318_65717662_65717894_65719680_65719810_65720044_65720165_65720241
transcript_24809.known	chr11	-	835	3	FSM	ENSG00000172922.11	ENST00000527610.1	835	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_2	46	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATTCCATCACCCCAATAA	8	True	NA	-39	True	AGTAAA	-16	NA	65720801	65719720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65720165_65720241_65720418_65720586
transcript_2481.known	chr1	+	2099	7	FSM	ENSG00000117640.18	ENST00000374301.7	2099	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	90.3451714260369	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	-11	True	NA	13	True	ATTAAA	-21	NA	25820192	25832938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820415_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_24810.known	chr11	+	1875	11	FSM	ENSG00000172977.13	ENST00000534650.5	1875	11	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	38.9979486640003	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGCAAAGTTCTTG	374	False	NA	24	True	AATAAA	-16	NA	65712619	65719603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_24811.known	chr11	+	2988	4	FSM	ENSG00000172818.10	ENST00000335987.8	2988	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	0.942809041582063	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGTTTCCGATG	-4	True	NA	24	True	ATTAAA	-14	NA	65787062	65797214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045
transcript_24812.known	chr11	-	493	2	FSM	ENSG00000255120.5	ENST00000534178.5	493	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGTCCAAGTTCAGTTT	NA	False	NA	NA	False	ACTAAA	-45	NA	65789875	65789050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65789438_65789769
transcript_24813.known	chr11	+	2364	16	FSM	ENSG00000172732.12	ENST00000308110.9	2364	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_9	26.2944016010168	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGTCCAGTTGCCTCG	-8	True	NA	27	True	AATAAA	-39	NA	65860432	65866439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865016_65865146_65865219_65865324_65865810_65865895_65865985
transcript_24814.known	chr11	+	1681	13	FSM	ENSG00000172803.18	ENST00000308342.7	1681	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	2.38484800354236	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTGTTGTCCTTACT	3	True	NA	8	True	AATAAA	-20	NA	65833962	65853701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65834102_65849477_65849583_65849919_65850031_65850149_65850272_65850430_65850555_65850750_65850856_65851054_65851161_65851327_65851404_65851639_65851680_65852464_65852552_65852629_65852790_65852872_65852959_65853281
transcript_24818.known	chr11	-	1813	12	FSM	ENSG00000172638.13	ENST00000531972.5	1813	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.5485422121517	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	781	False	NA	-33	True	TATAAA	-21	NA	65872811	65866440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65866713_65866844_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_24821.known	chr11	-	1934	11	FSM	ENSG00000172638.13	ENST00000307998.11	1934	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	23.4190093727297	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-32	True	NA	-33	True	TATAAA	-21	NA	65872800	65866440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_24875.known	chr11	-	860	4	FSM	ENSG00000172757.13	ENST00000524553.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5114.12481923023	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTTTTAACAACAT	5	True	NA	-166	True	NA	NA	NA	65856964	65855053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856884
transcript_24876.known	chr11	-	962	4	FSM	ENSG00000172757.13	ENST00000527344.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	5109.4110771747	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	5018	False	NA	-87	True	NA	NA	NA	65857033	65854974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856930
transcript_24877.known	chr11	-	1062	4	FSM	ENSG00000172757.13	ENST00000531407.5	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	5050.01797576559	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCATGCTGCCAACTTC	9	True	NA	-121	True	NA	NA	NA	65857868	65855008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65857631
transcript_24880.known	chr11	-	636	4	FSM	ENSG00000172757.13	ENST00000531413.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5114.12481923023	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGGAGGGGCTGGGGGG	8400	False	NA	NA	False	NA	NA	NA	65859289	65855256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65859230
transcript_24889.known	chr11	-	758	4	FSM	ENSG00000172757.13	ENST00000534769.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	1	43	junction_3	5093.85573237231	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGATCCCAGCAGGGGGAG	9872	False	NA	NA	False	GGGGCT	-3	NA	65861421	65855240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65861256
transcript_24895.known	chr11	-	1245	4	FSM	ENSG00000172757.13	ENST00000308162.10	1245	4	0	0	0	0	multi-exon	FALSE	canonical	3	10777	junction_2	68.3975308196299	20695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTGAGACGCCTTT	0	True	NA	-35	True	NA	NA	NA	65858180	65854672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096
transcript_24896.known	chr11	-	1509	2	FSM	ENSG00000172757.13	ENST00000530945.1	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	10925	junction_1	0	3235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGACAATAATAAAA	9495	False	NA	-55	True	ATTAAA	-3	NA	65858194	65854831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65856243_65858096
transcript_24897.known	chr11	+	694	3	FSM	ENSG00000172732.12	ENST00000533519.1	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	5.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGTCCAGTTGCCTCG	685	False	NA	27	True	AATAAA	-39	NA	65865167	65866439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65865324_65865810_65865895_65865985
transcript_24898.known	chr11	+	733	2	FSM	ENSG00000172732.12	ENST00000529742.1	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGTCCAGTTGCCTCG	737	False	NA	27	True	AATAAA	-39	NA	65865219	65866439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65865324_65865810
transcript_24899.known	chr11	-	1504	11	FSM	ENSG00000172638.13	ENST00000528176.5	1504	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	56.2086292307507	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAGTGGTTTTCAATCT	25	True	NA	-39	True	TATAAA	-15	NA	65872743	65866446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65866713_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_24903.known	chr11	-	1361	10	FSM	ENSG00000172500.13	ENST00000357519.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_5	50.2725902787327	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTGTCTTGGTTTAT	1	True	NA	-1	True	NA	NA	NA	65888471	65883739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_24904.known	chr11	-	1261	10	FSM	ENSG00000172500.13	ENST00000338369.6	1261	10	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_5	220.660120748831	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTCCTCGCTCCGGGG	4618	False	NA	-23	True	AATAAA	-18	NA	65888531	65883920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885508_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_24905.known	chr11	+	963	1	FSM	ENSG00000175602.4	ENST00000312579.4	963	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCACGGCCTGGGCAGCGT	19	True	NA	10	True	AATAAA	-17	NA	65890672	65891635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65890700_65891600
transcript_24906.known	chr11	-	1559	2	FSM	ENSG00000175573.7	ENST00000449692.3	1559	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-8	True	NA	-3	True	AATAAA	-38	NA	65919062	65916809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65918216_65918909
transcript_24907.known	chr11	+	822	7	FSM	ENSG00000175550.8	ENST00000312515.7	822	7	0	0	0	0	multi-exon	TRUE	canonical	3	1525	junction_6	202.406356948919	4583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCGCAGGACGTCAT	-4	True	NA	30	True	AATAAA	-24	NA	65919425	65921563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_24908.known	chr11	+	751	6	FSM	ENSG00000175550.8	ENST00000532933.1	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_5	216.785608378416	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCCAGGCTCTGCGCA	7	True	NA	21	True	AATAAA	-15	NA	65919723	65921554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_24914.nic	chr11	-	977	6	NIC	ENSG00000175376.9	novel	808	6	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	32.3827114368146	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	271	False	NA	-9	True	ATTAAA	-16	NA	66002205	65998432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_24915.known	chr11	-	808	6	FSM	ENSG00000175376.9	ENST00000529964.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.1283361405006	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-18	True	NA	-9	True	ATTAAA	-16	NA	66002166	65998432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66002039
transcript_24917.known	chr11	-	2761	6	FSM	ENSG00000175376.9	ENST00000526451.5	2761	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.1283361405006	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-8	True	NA	-23	True	AATAAA	-19	NA	66002156	65996544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
transcript_24918.known	chr11	-	2916	6	FSM	ENSG00000175376.9	ENST00000533544.6	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	31.6	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-9	True	NA	-23	True	AATAAA	-19	NA	66002157	65996544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66001909
transcript_24921.known	chr11	-	561	3	FSM	ENSG00000175376.9	ENST00000526449.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTGAGAATCACTTGAGC	-9	True	NA	NA	False	NA	NA	NA	66002157	65999897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66000162_66000302_66000482_66002039
transcript_24938.known	chr11	+	1135	3	FSM	ENSG00000175334.8	ENST00000533166.5	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	2044.5	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	82	False	NA	12	True	NA	NA	NA	66002580	66004131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66003071_66003234_66003374_66003625
transcript_24940.known	chr11	+	670	3	FSM	ENSG00000175334.8	ENST00000527348.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_1	1855	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGGAGTTTTCTCCC	-10	True	NA	NA	False	NA	NA	NA	66002781	66003898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66003040_66003234_66003374_66003625
transcript_24941.known	chr11	+	251	2	FSM	ENSG00000175334.8	ENST00000524663.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGGAATGGCTGAAAGACA	16	False	NA	NA	False	AAGAAA	-15	NA	66002315	66003678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66002514_66003625
transcript_24942.known	chr11	+	612	2	FSM	ENSG00000175334.8	ENST00000524628.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	859	junction_1	0	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	-19	True	NA	27	True	AATAAA	-15	NA	66002479	66004146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66002571_66003625
transcript_24943.known	chr11	+	731	3	FSM	ENSG00000175334.8	ENST00000312175.7	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_1	697.5	26978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTTGTGCACTGAAA	4	True	NA	30	True	AATAAA	-18	NA	66002502	66004149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66002571_66003234_66003374_66003625
transcript_24944.known	chr11	+	946	3	FSM	ENSG00000175334.8	ENST00000445560.6	946	3	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	1676	4838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	-21	True	NA	27	True	AATAAA	-15	NA	66002227	66004146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66002514_66003234_66003374_66003625
transcript_24945.known	chr11	+	592	3	FSM	ENSG00000175315.3	ENST00000312134.3	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	5	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTTCCAAGTGCTT	11	True	NA	21	True	AATAAA	-22	NA	66012007	66013505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66012285_66012825_66012952_66013316
transcript_24947.known	chr11	-	3301	3	FSM	ENSG00000175229.7	ENST00000312006.5	3301	3	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAGTGATCTATCCAAA	-10	True	NA	NA	False	AGTAAA	-14	NA	66049161	66040764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66043678_66045290_66045528_66049010
transcript_24949.known	chr11	+	1080	9	FSM	ENSG00000087365.16	ENST00000530981.1	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_6	705.067804806743	1215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCCAAGGAAAGAGATG	1158	False	NA	24	True	AATAAA	-4	NA	66060690	66068878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067948_66068046_66068147_66068334_66068673
transcript_2495.known	chr1	-	867	5	FSM	ENSG00000117632.23	ENST00000374291.5	867	5	0	0	0	0	multi-exon	FALSE	canonical	2	102	junction_4	1640.37227101046	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTAGTACTGTATTG	-7	True	NA	38	True	NA	NA	NA	25905128	25900740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905048
transcript_24950.known	chr11	+	612	2	FSM	ENSG00000175115.13	ENST00000534273.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	NA	False	NA	NA	False	NA	NA	NA	66220669	66221643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66220792_66221153
transcript_24962.known	chr11	+	1901	6	FSM	ENSG00000174903.16	ENST00000311481.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	949	junction_5	77.0750283814414	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTGGCCAAGTGTGG	6	True	NA	31	True	AATAAA	-43	NA	66268638	66277492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66272364_66272461_66275803_66275936_66276043
transcript_24963.known	chr11	+	1374	6	FSM	ENSG00000174871.11	ENST00000311445.7	1374	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	12.2702893201424	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGCCCCGGTTCTGCTC	-27	True	NA	13	True	AATAAA	-13	NA	66278174	66284206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66278538_66282258_66282328_66282732_66282781_66283034_66283148_66283247_66283392_66283569
transcript_24969.known	chr11	+	991	5	FSM	ENSG00000174903.16	ENST00000527397.1	991	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	448.347730561893	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTACTGCCCTGGCTG	-3	True	NA	NA	False	NA	NA	NA	66268589	66276629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66275803_66275936_66276043
transcript_24981.known	chr11	-	1097	8	FSM	ENSG00000174851.16	ENST00000376901.9	1097	8	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_3	97.9339635902162	5708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-5	True	NA	-7	True	NA	NA	NA	66289143	66284579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66284784_66284872_66284967_66285380_66285537_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_24982.known	chr11	-	943	7	FSM	ENSG00000174851.16	ENST00000359461.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	460.819921444375	2446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-7	True	NA	-7	True	NA	NA	NA	66289145	66284579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66284784_66284872_66284967_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_24983.known	chr11	-	1424	10	FSM	ENSG00000174744.14	ENST00000359957.8	1424	10	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_4	25.7499850173755	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTGCCCTGTGTGT	3	True	NA	-12	True	ATTAAA	-14	NA	66345104	66337338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66337890_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_24984.known	chr11	-	1363	10	FSM	ENSG00000174744.14	ENST00000425825.6	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	117.86055791108	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	-12	True	NA	-6	True	ATTAAA	-20	NA	66345119	66337332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66337808_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_24985.known	chr11	-	1817	9	FSM	ENSG00000174744.14	ENST00000530238.5	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	27.1773688020014	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGACTGGAATTAAAACC	18	True	NA	-42	True	NA	NA	NA	66345089	66337368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66337890_66338242_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_24987.known	chr11	-	2007	2	FSM	ENSG00000174684.7	ENST00000311181.5	2007	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCCGTTACTCTC	-12	True	NA	-3	True	AATAAA	-17	NA	66347629	66345373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66346241_66346489
transcript_24988.known	chr11	-	2474	12	FSM	ENSG00000174669.12	ENST00000540386.5	2474	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	48.5669002681136	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	640	False	NA	-35	True	NA	NA	NA	66371820	66362521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366192_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_24989.known	chr11	-	2455	12	FSM	ENSG00000174669.12	ENST00000357440.7	2455	12	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_9	33.3664848920228	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	5	True	NA	-34	True	NA	NA	NA	66371760	66362520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_2499.known	chr1	-	1712	5	FSM	ENSG00000117632.23	ENST00000399728.5	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	1576.91904912713	11073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTGTGAAATGACTAA	852	False	NA	-45	True	AATAAA	-21	NA	25906153	25900117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905851
transcript_24993.known	chr11	-	2380	11	FSM	ENSG00000174669.12	ENST00000619145.4	2380	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	54.5659234321202	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	640	False	NA	-35	True	NA	NA	NA	66371820	66362521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_25.known	ERCC-00059	+	509	1	FSM	ERCC-00059A	DQ668356	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00059_+_0_500
transcript_25002.known	chr11	+	286	2	FSM	ENSG00000255468.7	ENST00000581155.5	286	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTGTGCTGACT	110	False	NA	NA	False	NA	NA	NA	66347949	66353619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66348071_66353454
transcript_25007.known	chr11	+	2676	18	FSM	ENSG00000254986.8	ENST00000541961.5	2676	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	114.487151936265	1800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	0	True	NA	19	True	AATAAA	-19	NA	66480430	66509657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66480466_66482179_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_25008.known	chr11	+	3078	18	FSM	ENSG00000254986.8	ENST00000532677.5	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	76.5536652801162	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	-7	True	NA	19	True	AATAAA	-19	NA	66480012	66509657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66480466_66482195_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_2501.known	chr1	-	1137	5	FSM	ENSG00000117632.23	ENST00000357865.6	1137	5	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_4	1660.96212705167	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAATAAAACTGCACAG	9712	False	NA	-42	True	NA	NA	NA	25906991	25900594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906787
transcript_25016.known	chr11	+	3368	17	FSM	ENSG00000174483.20	ENST00000318312.12	3368	17	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	13.0202666543355	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTTAATGGAGTTA	-11	True	NA	6	True	ATTAAA	-15	NA	66510634	66533598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
transcript_25058.known	chr11	-	2209	5	FSM	ENSG00000174547.13	ENST00000524576.5	2209	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	650.941817676511	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGAGACTTCTGCC	1052	False	NA	-23	True	AATAAA	-20	NA	66466738	66435079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66465912
transcript_25065.known	chr11	-	828	4	FSM	ENSG00000255517.7	ENST00000527092.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.7540843131393	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCCTTGCCTCACAG	13	True	NA	NA	False	NA	NA	NA	66480231	66473489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66473868_66474143_66474226_66474929_66475105_66480038
transcript_25069.known	chr11	-	4803	3	FSM	ENSG00000174165.8	ENST00000310442.5	4803	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	8.5	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCATGCCTTTTTAAATTG	0	True	NA	NA	False	AATAAA	-23	NA	66546048	66535625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66539825_66543703_66543982_66545722
transcript_25078.known	chr11	-	944	2	FSM	ENSG00000255517.7	ENST00000527274.3	982	2	38	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTGTCTGGAGAGTGC	13	True	NA	NA	False	ATTAAA	-24	NA	66480231	66477345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66478097_66480038
transcript_25079.known	chr11	-	812	5	FSM	ENSG00000174547.13	ENST00000534488.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	637.909280383974	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-5	True	NA	-10	True	AATAAA	-13	NA	66438826	66435837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437436_66438163_66438260_66438631
transcript_25080.known	chr11	-	1527	5	FSM	ENSG00000174547.13	ENST00000430466.6	1527	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_4	471.301654993912	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGACTTCTGCCAATAT	-27	True	NA	-18	True	AATAAA	-25	NA	66438848	66435074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438709
transcript_25081.known	chr11	-	922	6	FSM	ENSG00000174547.13	ENST00000329819.4	922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	677.61995248074	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-13	True	NA	-10	True	AATAAA	-13	NA	66438834	66435837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66436113_66436815_66436910_66437103_66437264_66437349_66437444_66438163_66438260_66438631
transcript_25083.known	chr11	+	2882	21	FSM	ENSG00000248746.6	ENST00000513398.2	2882	21	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_11	34.7273307353157	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	-2	True	NA	12	True	AATAAA	-25	NA	66546902	66563334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_25091.nic	chr11	+	677	4	ISM	ENSG00000248746.6	ENST00000513398.2	2882	21	-7	9037	-7	-264	5prime_fragment	FALSE	canonical	3	291	junction_3	35.6495285928003	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGCTGGC	NA	False	NA	NA	False	NA	NA	NA	66546895	66554297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044
transcript_25098.known	chr11	-	1873	13	FSM	ENSG00000174080.12	ENST00000526010.2	1873	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	5.95060687848073	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGTATAAATGCTCAGT	NA	False	NA	1	True	AATAAA	-19	NA	66568879	66563463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66564008_66564087_66564147_66564557_66564649_66564741_66564807_66564886_66565007_66565670_66565752_66565830_66565928_66566021_66566168_66566290_66566405_66567245_66567322_66567443_66567663_66567983_66568083_66568717
transcript_25103.known	chr11	+	1214	8	FSM	ENSG00000173992.9	ENST00000530961.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	79.8925298543651	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTATTTTCGTTTGGG	-2	True	NA	21	True	NA	NA	NA	66593200	66605998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_25104.known	chr11	+	1066	8	FSM	ENSG00000173992.9	ENST00000533244.6	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	29.4465964215956	3120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	2	True	NA	42	True	AATGAA	-21	NA	66593184	66606019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_25109.known	chr11	+	942	8	FSM	ENSG00000173992.9	ENST00000310190.8	942	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.1486954446953	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGGACTTTGCCTGCC	38	False	NA	-58	True	NA	NA	NA	66593240	66605919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593609_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_25115.known	chr11	+	1196	7	FSM	ENSG00000173992.9	ENST00000530384.5	1196	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	26.0362994469047	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCCAGAGGGACTTT	NA	False	NA	-65	True	NA	NA	NA	66593152	66605912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_25124.known	chr11	+	872	3	FSM	ENSG00000173992.9	ENST00000526066.5	872	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGGGTTTGAGTCAA	7	True	NA	NA	False	NA	NA	NA	66593189	66599803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593641_66593715_66599115
transcript_25127.known	chr11	+	798	4	FSM	ENSG00000173992.9	ENST00000525435.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	113.962956944595	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGTGTTTTGTGCTTG	797	False	NA	40	True	AATGAA	-19	NA	66600434	66606017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66600550_66605153_66605417_66605488_66605593_66605701
transcript_25131.known	chr11	+	1763	4	FSM	ENSG00000173933.21	ENST00000408993.6	1763	4	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	179.611308725877	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTTCAACTTAGGGT	5	True	NA	0	True	NA	NA	NA	66638671	66646452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638894_66639699_66640124_66643449_66644141_66646026
transcript_25137.known	chr11	+	5367	3	FSM	ENSG00000239306.5	ENST00000310137.5	5367	3	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_2	4.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTGGTGGCATGCA	6	True	NA	NA	False	AAGAAA	-13	NA	66616629	66629934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66617058_66624213_66625679_66626460
transcript_25141.known	chr11	+	1011	3	FSM	ENSG00000173933.21	ENST00000530235.1	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	58.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	24	False	NA	-13	True	NA	NA	NA	66638719	66646439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638894_66639699_66640124_66646026
transcript_25147.known	chr11	+	764	3	FSM	ENSG00000173933.21	ENST00000528039.5	764	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.5	2267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	20	False	NA	16	True	AATAAA	-16	NA	66638715	66646468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639838_66640124_66646026
transcript_25149.known	chr11	+	829	2	FSM	ENSG00000248643.5	ENST00000500635.2	829	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2046	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	46	False	NA	15	True	AATAAA	-15	NA	66616669	66646467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66617058_66646026
transcript_25151.known	chr11	+	757	2	FSM	ENSG00000173933.21	ENST00000532968.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTTTACCTTAGGCAAA	31	False	NA	NA	False	NA	NA	NA	66638726	66640289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638894_66639699
transcript_25153.known	chr11	+	1426	3	FSM	ENSG00000239306.5	ENST00000393979.3	1426	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	179	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	2	True	NA	25	True	AATAAA	-27	NA	66616625	66627343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66617058_66624213_66624325_66626460
transcript_25154.known	chr11	+	1607	4	FSM	ENSG00000173933.21	ENST00000310092.12	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_2	75.2964511484808	3215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	7	True	NA	16	True	AATAAA	-16	NA	66638702	66646468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699_66640124_66643449_66644141_66646026
transcript_25155.known	chr11	+	921	3	FSM	ENSG00000173933.21	ENST00000398692.8	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	200.5	4774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	2	True	NA	16	True	AATAAA	-16	NA	66638697	66646468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699_66640124_66646026
transcript_25156.known	chr11	+	3029	3	FSM	ENSG00000173933.21	ENST00000396053.9	3029	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	257.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGAATTTGTTGTT	0	True	NA	NA	False	ATTAAA	-14	NA	66638666	66668374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699_66640124_66665855
transcript_25157.known	chr11	+	1548	2	FSM	ENSG00000173933.21	ENST00000483858.5	1548	2	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	0	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATTTCCGTGACTCC	2	True	NA	17	True	AATAAA	-27	NA	66638697	66641192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699
transcript_25158.known	chr11	+	654	3	FSM	ENSG00000173933.21	ENST00000506523.6	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	286.5	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTCACTGTTCATTC	22	False	NA	3	True	AATAAA	-18	NA	66638717	66649930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699_66640124_66649735
transcript_25159.known	chr11	-	1806	4	FSM	ENSG00000173914.12	ENST00000310046.9	1806	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	52.4933858267454	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTATGTTTGTCTT	-44	True	NA	-4	True	AATAAA	-18	NA	66677887	66664997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66665579_66668614_66669292_66676667_66677092_66677763
transcript_2516.known	chr1	-	1443	5	FSM	ENSG00000117632.23	ENST00000455785.7	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	2965	junction_4	446.224719171854	41307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTGTGAAATGACTAAAG	0	True	NA	-43	True	AATAAA	-23	NA	25906419	25900115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_25160.known	chr11	-	1646	2	FSM	ENSG00000173914.12	ENST00000531036.2	1646	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAATAATGGGAGAA	-34	True	NA	34	True	ATTAAA	-15	NA	66677877	66675559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66677092_66677763
transcript_25162.known	chr11	+	1462	8	FSM	ENSG00000173653.8	ENST00000309657.8	1462	8	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	60.4317797189525	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTGGGATCTTGTGTG	3	True	NA	53	True	ATTAAA	-45	NA	66843440	66846552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_25163.known	chr11	+	1428	8	FSM	ENSG00000173653.8	ENST00000524849.5	1428	8	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_2	108.365029376809	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTTGGGAATCGG	13	True	NA	33	True	ATTAAA	-25	NA	66843450	66846532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_25165.known	chr11	+	1379	7	FSM	ENSG00000173653.8	ENST00000524506.5	1379	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	136.024099172005	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	-1	True	NA	29	True	ATTAAA	-21	NA	66843436	66846528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
transcript_25166.known	chr11	+	1270	7	FSM	ENSG00000173653.8	ENST00000525356.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	108.627293480455	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	285	False	NA	29	True	ATTAAA	-21	NA	66843722	66846528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_25168.nic	chr11	+	1299	7	ISM	ENSG00000173653.8	ENST00000309657.8	1462	8	257	24	-25	0	3prime_fragment	FALSE	canonical	3	281	junction_1	56.2753646515655	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	260	False	NA	29	True	ATTAAA	-21	NA	66843697	66846528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_2517.known	chr1	-	2947	4	FSM	ENSG00000117632.23	ENST00000465604.1	2947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2965	junction_3	513.595387656687	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTTG	2	True	NA	-15	True	AATAAA	-17	NA	25906417	25900567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25903814_25904663_25904739_25906388
transcript_25170.nic	chr11	+	1236	6	ISM	ENSG00000173653.8	ENST00000524506.5	1379	7	261	0	-25	0	3prime_fragment	FALSE	canonical	3	55	junction_5	136.134639236309	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	260	False	NA	29	True	ATTAAA	-21	NA	66843697	66846528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
transcript_25174.known	chr11	-	11136	38	FSM	ENSG00000173898.15	ENST00000533211.6	11136	38	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_37	44.8718001803404	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATGACTTTTTAAATG	-7	True	NA	-15	True	ATTAAA	-15	NA	66729216	66682496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66686105_66686397_66686441_66686993_66687168_66687426_66687648_66687867_66687919_66688003_66688080_66688168_66688312_66688652_66688850_66689095_66689181_66689804_66689944_66690038_66690284_66691283_66691659_66692535_66692741_66692969_66693101_66693185_66693447_66693771_66693862_66694138_66694364_66696276_66696541_66698638_66698786_66698991_66699083_66699405_66699609_66700525_66701283_66701583_66701722_66704597_66705469_66705683_66705838_66707515_66707819_66708140_66708300_66708901_66709020_66710581_66710770_66710916_66711030_66713630_66713747_66714090_66714172_66714315_66714408_66715221_66715396_66715829_66715982_66721083_66721263_66721349_66721441_66728740
transcript_25178.known	chr11	-	4017	22	FSM	ENSG00000173599.15	ENST00000393958.7	4017	22	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_8	10.6215030259663	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGATCCTGTGCAGCCC	-1	True	NA	-6	True	AATAAA	-23	NA	66958383	66848519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66849148_66849229_66849371_66849610_66849860_66849936_66850117_66850219_66850465_66850673_66850924_66851039_66851281_66851789_66851947_66852438_66852661_66852746_66852837_66853238_66853384_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_2518.known	chr1	-	665	4	FSM	ENSG00000117632.23	ENST00000446334.1	665	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	1768.36163973574	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAGAAGAGAACAACAACT	-8	True	NA	-59	True	NA	NA	NA	25905489	25901611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901683_25903640_25903814_25904663_25904739_25905143
transcript_25180.known	chr11	-	1702	12	FSM	ENSG00000173599.15	ENST00000524491.6	1702	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	26.2691095338704	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGTGGCTGCAGCCCCTG	6	True	NA	-12	True	AATAAA	-14	NA	66958376	66860429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66860670_66863773_66863957_66866186_66866350_66868845_66868965_66870301_66870454_66870774_66870893_66871051_66871198_66871314_66871481_66871686_66871872_66872023_66872160_66952429_66952469_66958321
transcript_25186.known	chr11	+	1187	2	FSM	ENSG00000173237.5	ENST00000308963.4	1187	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACGATTTGCCTGGTGA	0	True	NA	NA	False	AATAAA	-15	NA	66975276	66977004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66975639_66976179
transcript_25187.known	chr11	+	1168	2	FSM	ENSG00000173237.5	ENST00000683896.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTGCCTGGTGACTAAC	-2	True	NA	NA	False	AATAAA	-20	NA	66975303	66977009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66975639_66976176
transcript_25188.nic	chr11	+	1309	3	ISM	ENSG00000173227.14	ENST00000393946.6	4534	11	23	39631	23	-21673	5prime_fragment	FALSE	canonical	3	5	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGACTTTCTTTTCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	67006800	67011232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_67007456_67009878_67010123_67010822
transcript_25189.known	chr11	+	1104	5	FSM	ENSG00000173156.7	ENST00000308831.7	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	6.59545297913646	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTCGTGCCTCTTT	-6	True	NA	13	True	AAGAAA	-15	NA	67056846	67072017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67057035_67065895_67065984_67066737_67066848_67070424_67070560_67071434
transcript_2519.known	chr1	-	3487	11	FSM	ENSG00000158006.14	ENST00000374282.8	3487	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	7.74854825112421	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTTGGCTTGCTCTT	7	True	NA	-6	True	AAAAAG	-16	NA	25998063	25959766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990864_25998024
transcript_25193.known	chr11	+	463	3	FSM	ENSG00000173120.15	ENST00000517637.2	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAGAAGAAGAAG	5	True	NA	NA	False	NA	NA	NA	67240300	67243816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67240370_67243008_67243093_67243506
transcript_25198.nic	chr11	+	561	4	ISM	ENSG00000173020.11	ENST00000416281.6	4493	17	7736	1061	2	-97	3prime_fragment	FALSE	canonical	3	513	junction_2	31.4572019664107	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTATTTGTTTTCCC	528	False	NA	NA	False	TATAAA	-22	NA	67284272	67285494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_67284374_67284846_67284984_67285074_67285189_67285285
transcript_25199.known	chr11	+	3403	21	FSM	ENSG00000173020.11	ENST00000308595.10	3403	21	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_17	37.9880244287591	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGCTGTCTCAGACTCTT	14	True	NA	27	True	TATAAA	-14	NA	67266472	67286556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67266813_67277271_67277349_67279199_67279274_67279417_67279520_67279625_67279701_67279838_67279901_67280731_67280784_67281092_67281185_67281458_67281559_67281649_67281729_67281821_67281953_67282270_67282366_67282434_67282543_67282751_67282819_67283127_67283229_67283706_67283774_67283853_67283950_67284210_67284374_67284846_67284984_67285074_67285189_67285285
transcript_25200.known	chr11	+	2128	15	FSM	ENSG00000172932.16	ENST00000511455.7	2128	15	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_7	29.3858913808123	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	-17	True	NA	6	True	AATAAA	-16	NA	67289302	67302484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_25203.known	chr11	+	2138	14	FSM	ENSG00000172932.16	ENST00000447274.7	2138	14	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_6	30.374194902521	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTCTGCTCACTGGGC	-24	True	NA	7	True	AATAAA	-17	NA	67289401	67302485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67289551_67290077_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_25204.known	chr11	+	1491	5	FSM	ENSG00000172932.16	ENST00000512101.5	1491	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	22.9605640174626	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGGTGAGAGCCTGCGAG	-20	True	NA	NA	False	NA	NA	NA	67289299	67291651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67290591_67291522_67291602
transcript_25210.known	chr11	+	2086	11	FSM	ENSG00000172613.8	ENST00000307980.7	2086	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	12.3838604643302	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	2	True	NA	NA	False	ATTAAA	-18	NA	67391985	67398410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393690_67393791_67395715_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
transcript_25215.known	chr11	-	1389	7	FSM	ENSG00000172531.16	ENST00000312989.11	1389	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	1071.50574219439	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	5558	False	NA	-8	True	AATAAA	-19	NA	67401793	67398182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401233_67401727
transcript_25216.known	chr11	-	1054	6	FSM	ENSG00000172531.16	ENST00000358239.8	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	1115.11889949009	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACATGGAGCCTTGGTG	-32	True	NA	-32	True	NA	NA	NA	67401871	67398430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401727
transcript_25222.known	chr11	-	584	4	FSM	ENSG00000175482.9	ENST00000531239.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	91.2249965744039	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCGCAGCTGAAGC	2	True	NA	NA	False	NA	NA	NA	67353534	67351808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353363
transcript_25224.known	chr11	-	1486	4	FSM	ENSG00000175482.9	ENST00000529704.5	1486	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	82.7405583737504	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGCTGGGCGCAGTGG	3396	False	NA	NA	False	AATAAA	-11	NA	67353579	67350776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353538
transcript_25225.known	chr11	-	904	4	FSM	ENSG00000175482.9	ENST00000532830.5	904	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.951911959329	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	3	True	NA	-11	True	AATAAA	-18	NA	67356972	67351547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67356742
transcript_25235.known	chr11	-	967	3	FSM	ENSG00000175505.11	ENST00000533438.1	967	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTACCGAGCTGGGGAGG	-3	True	NA	NA	False	NA	NA	NA	67374177	67364961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67365631_67367459_67367627_67374046
transcript_25236.nic	chr11	+	1275	2	ISM	ENSG00000172613.8	ENST00000542139.1	578	6	-38	2513	-20	-489	intron_retention	FALSE	canonical	3	99	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAAGCAGGTCTTTCA	NA	False	NA	NA	False	NA	NA	NA	67391937	67393294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_67392079_67392160
transcript_25238.known	chr11	-	899	4	FSM	ENSG00000175482.9	ENST00000530584.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	97.8241051865825	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	18	True	NA	-11	True	AATAAA	-18	NA	67353518	67351547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353293
transcript_25239.known	chr11	-	1421	7	FSM	ENSG00000172531.16	ENST00000376745.9	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	284.595277933809	2893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-19	True	NA	-8	True	AATAAA	-19	NA	67401858	67398182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_25240.known	chr11	-	1483	6	FSM	ENSG00000172531.16	ENST00000526510.6	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	2805	junction_1	129.544741305852	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGTCAAAGCTGG	-24	True	NA	-34	True	NA	NA	NA	67401863	67398208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_25241.known	chr11	-	1677	6	FSM	ENSG00000172531.16	ENST00000679175.1	1677	6	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	288.100954528096	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAAGCTGGATTCTCGC	-14	True	NA	-26	True	AATAAA	-1	NA	67401604	67398200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067
transcript_25242.known	chr11	-	1809	6	FSM	ENSG00000172531.16	ENST00000677343.1	1809	6	0	0	0	0	multi-exon	FALSE	canonical	3	2292	junction_2	298.269274314335	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGATTCTCGCCATG	-24	True	NA	-22	True	AATAAA	-5	NA	67401863	67398196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399666_67400688_67400920_67401067_67401200_67401727
transcript_25243.known	chr11	-	860	2	FSM	ENSG00000175482.9	ENST00000533429.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	3897	False	NA	-11	True	AATAAA	-18	NA	67353078	67351547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690
transcript_25245.known	chr11	+	1806	16	FSM	ENSG00000175634.15	ENST00000528964.5	1806	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	159.902831605809	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGCCACGCCCCGCGCT	18	True	NA	-30	True	NA	NA	NA	67428503	67435344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432352_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_25247.known	chr11	+	1733	15	FSM	ENSG00000175634.15	ENST00000312629.10	1733	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	110.230671867716	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	8	True	NA	27	True	ATTAAA	-14	NA	67428493	67435401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_25271.known	chr11	+	5528	8	FSM	ENSG00000175634.15	ENST00000525088.5	5528	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	148.224182113666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	19	True	NA	27	True	ATTAAA	-14	NA	67428504	67435401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67429241_67429526_67432658_67432736_67432838_67432951_67433195_67433339_67433448_67433994_67434276_67434376_67434485_67434581
transcript_25272.known	chr11	-	1931	12	FSM	ENSG00000172725.14	ENST00000393893.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	155.638540766421	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGACCTGCTGCTGCAA	-7	True	NA	-2	True	AATAAA	-19	NA	67443821	67438047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403_67443466_67443752
transcript_25274.known	chr11	-	4411	11	FSM	ENSG00000172725.14	ENST00000341356.10	4411	11	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_6	48.3455271974564	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	5	True	NA	-2	True	AATAAA	-17	NA	67443476	67435509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_25275.known	chr11	-	4464	11	FSM	ENSG00000172725.14	ENST00000616321.4	4464	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	164.894178187103	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-3	True	NA	-2	True	AATAAA	-17	NA	67443484	67435509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440485_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_25285.known	chr11	-	1954	12	FSM	ENSG00000172725.14	ENST00000537042.5	1954	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	207.509075774834	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATTCCAAATAAAATTC	-4	True	NA	-36	True	NA	NA	NA	67443456	67438081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67440701_67440837_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_25288.nic	chr11	-	895	7	NIC	ENSG00000172663.9	novel	3551	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_5	236.772042268508	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-17	True	NA	-9	True	AATAAA	-22	NA	67469265	67464352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467564_67468027_67468093_67469018
transcript_25289.known	chr11	-	3551	7	FSM	ENSG00000172663.9	ENST00000308022.7	3551	7	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_5	94.9789450352024	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTGACTTGACTT	-3	True	NA	NA	False	AATAAA	-44	NA	67469251	67461709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67464697_67464802_67464857_67465055_67465101_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_25291.known	chr11	-	1063	7	FSM	ENSG00000172663.9	ENST00000545682.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	275.169442747959	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	9	True	NA	-9	True	AATAAA	-22	NA	67469239	67464352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67464697_67464802_67464857_67465055_67465268_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_25297.known	chr11	+	1186	6	FSM	ENSG00000110711.11	ENST00000683237.1	1186	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	89.0190990742998	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTCTGCTGAGCTGCT	30	False	NA	26	True	TATAAA	-19	NA	67483067	67491103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490450_67490787
transcript_25300.known	chr11	+	1225	6	FSM	ENSG00000110711.11	ENST00000683856.1	1225	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	87.6607095567906	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	354	False	NA	24	True	TATAAA	-17	NA	67483487	67491101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483711_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490458_67490787
transcript_25304.known	chr11	-	680	6	FSM	ENSG00000172663.9	ENST00000536020.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	357.860531492368	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCTCCAGGACCCTCG	-20	True	NA	NA	False	NA	NA	NA	67469268	67464536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467564_67468016_67468093_67469018
transcript_25305.known	chr11	-	823	6	FSM	ENSG00000172663.9	ENST00000393877.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	289.697083174822	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-2	True	NA	-48	True	NA	NA	NA	67469250	67464391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_25308.known	chr11	+	1304	5	FSM	ENSG00000110711.11	ENST00000525341.2	1304	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	18.3081266108797	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGGCCCTGCCTTAC	48	False	NA	-80	True	NA	NA	NA	67483181	67490997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315
transcript_2531.known	chr1	-	2523	11	FSM	ENSG00000158006.14	ENST00000374284.5	2523	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	14.4737693777399	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCCACTCCCAGAGAGG	26	True	NA	NA	False	AATAAA	-18	NA	25998044	25960769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990922_25998024
transcript_25310.known	chr11	+	1030	5	FSM	ENSG00000110711.11	ENST00000528641.7	1030	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	95.2716510825754	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	3	True	NA	24	True	TATAAA	-17	NA	67483040	67491101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483258_67487005_67487186_67490037_67490215_67490315_67490458_67490787
transcript_25314.known	chr11	+	721	4	FSM	ENSG00000110711.11	ENST00000682659.1	721	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	103.964737611686	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATTTATCTCTCTCT	21	True	NA	9	True	TATAAA	-2	NA	67483154	67491086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483258_67490037_67490215_67490315_67490458_67490787
transcript_25316.known	chr11	-	909	4	FSM	ENSG00000167797.8	ENST00000301488.8	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	49.3851079667635	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGCCTTTCTGGGTC	-1	True	NA	-12	True	AATAAA	-25	NA	67508162	67506496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67508000
transcript_25317.known	chr11	-	923	4	FSM	ENSG00000167797.8	ENST00000531178.1	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	304.933872612845	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	3	True	NA	-57	True	NA	NA	NA	67508158	67506619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67507859
transcript_25335.known	chr11	+	741	7	FSM	ENSG00000084207.18	ENST00000398606.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	3	7876	junction_1	2457.73450333613	64072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCACTGTGTTTCCT	-1	True	NA	47	True	AATAAA	-17	NA	67583811	67586653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_25336.known	chr11	+	706	6	FSM	ENSG00000084207.18	ENST00000398603.6	706	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	5822.21223934683	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTGTTTCCTGGG	65	False	NA	50	True	AATAAA	-20	NA	67583741	67586656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586388
transcript_25337.known	chr11	+	723	5	FSM	ENSG00000084207.18	ENST00000498765.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6140.44519456855	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGCCTTCCTTTCTC	333	False	NA	-2	True	NA	NA	NA	67584463	67586604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67584571_67584684_67584773_67585037_67585242_67586103_67586212_67586388
transcript_25341.known	chr11	+	1512	10	FSM	ENSG00000167792.13	ENST00000415352.6	1512	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	247.291301210376	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGCTGCTGTGACTGT	13	True	NA	17	True	AATAAA	-22	NA	67606943	67612535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67607056_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_25342.known	chr11	+	1503	10	FSM	ENSG00000167792.13	ENST00000529927.5	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	244.484693656063	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCAGCTGCCGCTGCTG	9	True	NA	10	True	AATAAA	-15	NA	67606939	67612528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67607050_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_25345.known	chr11	+	1560	10	FSM	ENSG00000167792.13	ENST00000322776.11	1560	10	0	0	0	0	multi-exon	TRUE	canonical	3	688	junction_1	43.305119019965	3214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTACCCTTTACCCA	5	True	NA	36	True	AATAAA	-41	NA	67606935	67612554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_25353.known	chr11	-	745	4	FSM	ENSG00000167799.10	ENST00000376693.3	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	4.18993502999218	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTTGCTTCTGCTGTA	-15	True	NA	-1	True	AATAAA	-18	NA	67629937	67627937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67628252_67628322_67628401_67628918_67629052_67629717
transcript_25358.nnic	chr11	+	944	3	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	57193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCACAAGATAATGTCA	NA	False	NA	NA	False	NA	NA	NA	67682705	67856854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr11_+_67683085_67854614_67854792_67856466
transcript_25360.known	chr11	-	287	1	FSM	ENSG00000239559.2	ENST00000472498.2	287	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4604	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGAATGTCAACAAT	23	False	NA	NA	False	NA	NA	NA	67683058	67682771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67682800_67683100
transcript_2537.known	chr1	+	4113	3	FSM	ENSG00000175087.10	ENST00000374269.2	4113	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGCTTTAGTGGCTC	-6	True	NA	NA	False	AATAAA	-35	NA	26111823	26125555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26111916_26114291_26114594_26121836
transcript_2538.known	chr1	+	638	3	FSM	ENSG00000142684.9	ENST00000374266.7	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_2	10	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	-21	True	NA	35	True	AATAAA	-19	NA	26169907	26170873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26170184_26170417_26170481_26170574
transcript_25380.known	chr11	-	1857	4	FSM	ENSG00000160172.10	ENST00000529253.5	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	32.4995726467629	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGATGATCTGTGGCTA	NA	False	NA	NA	False	AATAAA	-31	NA	67805334	67791766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67793294_67796683_67796834_67803001_67803065_67805217
transcript_25388.known	chr11	-	1814	3	FSM	ENSG00000160172.10	ENST00000531806.5	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	22.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTGGCAAGAATGATG	NA	False	NA	NA	False	NA	NA	NA	67805322	67791647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67793294_67803001_67803065_67805217
transcript_2539.known	chr1	+	698	2	FSM	ENSG00000142684.9	ENST00000270812.6	698	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	13	True	NA	35	True	AATAAA	-19	NA	26169941	26170873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26170184_26170417
transcript_25394.nnic	chr11	+	613	3	Fusion	ENSG00000254792.1_ENSG00000251637.6	novel	600	3	NA	NA	-121	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTGTGTTGCCTGAT	NA	False	NA	7	True	GATAAA	-14	NA	67840820	67894093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_67841047_67888152_67888325_67893878
transcript_25395.nnic	chr11	+	790	3	NNC	ENSG00000251637.6	novel	600	3	NA	NA	-1851	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTGTGTTGCCTGAT	NA	False	NA	7	True	GATAAA	-14	NA	67884625	67894093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_67885029_67888152_67888325_67893878
transcript_25396.known	chr11	+	600	3	FSM	ENSG00000251637.6	ENST00000529069.5	600	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGTGTGTTGCCTGAT	NA	False	NA	7	True	GATAAA	-14	NA	67886476	67894093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67886690_67888152_67888325_67893878
transcript_25398.nnic	chr11	-	819	4	NNC	ENSG00000254610.3	novel	776	4	NA	NA	-10	10986	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.16024689946929	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGCTCCTGGCTGCA	NA	False	NA	2	True	TATAAA	-22	NA	67955812	67923576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_67923756_67936774_67936992_67939682_67939775_67955481
transcript_25399.known	chr11	-	776	4	FSM	ENSG00000254610.3	ENST00000527543.2	776	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.16024689946929	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	67955802	67934562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67934709_67936774_67936992_67939682_67939775_67955481
transcript_2540.known	chr1	+	2535	21	FSM	ENSG00000142675.18	ENST00000361530.11	2535	21	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_8	16.3113457446037	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	-18	True	NA	26	True	AATAAA	-18	NA	26177490	26189884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_25401.nnic	chr11	-	684	3	NIC	ENSG00000254610.3	novel	776	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	NA	False	NA	NA	False	NA	NA	NA	67955802	67934562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_67934709_67936774_67936992_67955481
transcript_25402.nnic	chr11	-	1053	2	Fusion	ENSG00000254610.3_ENSG00000273819.1	novel	1102	4	NA	NA	10	545	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATTTGCTGTTGCCTTCTT	NA	False	NA	-7	True	AATAAA	-10	NA	67955792	67812011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_67812754_67955481
transcript_25404.known	chr11	-	739	4	FSM	ENSG00000255306.1	ENST00000532296.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACAATTCAAGAGATGAA	8458	False	NA	NA	False	AATAAA	-27	NA	68030461	68024808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68025062_68025186_68025333_68029283_68029421_68030258
transcript_25410.known	chr11	+	689	7	FSM	ENSG00000110717.13	ENST00000526339.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	862.505780979016	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGTTGCTCAACAACG	60	False	NA	NA	False	NA	NA	NA	68030742	68036514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68030878_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_25424.known	chr11	+	353	3	FSM	ENSG00000110717.13	ENST00000528492.1	353	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	982	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACGGCCTCTTGTCTTG	5	True	NA	20	True	AATAAA	-11	NA	68030687	68036639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68030734_68036252_68036382_68036461
transcript_25427.known	chr11	+	737	7	FSM	ENSG00000110717.13	ENST00000313468.10	737	7	0	0	0	0	multi-exon	FALSE	canonical	3	1404	junction_1	376.226623489383	12220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	-2	True	NA	25	True	AATAAA	-16	NA	68030680	68036644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_25428.known	chr11	+	814	7	FSM	ENSG00000110717.13	ENST00000526446.5	814	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	858.421160555172	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGGAGGCCGAGATC	1	True	NA	-82	True	NA	NA	NA	68030683	68036537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032524_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_25429.known	chr11	+	531	5	FSM	ENSG00000110717.13	ENST00000531228.1	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1009.91658071348	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCGGGGAGGAGCGTTG	60	False	NA	NA	False	NA	NA	NA	68030742	68033223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68030962_68032151_68032210_68032285_68032337_68032922_68033013_68033110
transcript_2543.known	chr1	+	624	3	FSM	ENSG00000142675.18	ENST00000465415.1	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	17.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCCAACATGGTGAA	-6	True	NA	NA	False	NA	NA	NA	26177502	26181083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26177600_26180452_26180611_26180714
transcript_25430.known	chr11	+	664	2	FSM	ENSG00000255031.5	ENST00000534517.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	951	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTCCCGATCTCGT	9049	False	NA	22	True	ATTAAA	-33	NA	68052822	68053762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68053086_68053361
transcript_25433.known	chr11	-	1599	11	FSM	ENSG00000110066.15	ENST00000402789.5	1599	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	108.976190060031	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTCTGAGTCTGG	40	True	NA	-4	True	AATAAA	-15	NA	68213595	68165718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_25435.known	chr11	-	2666	10	FSM	ENSG00000110066.15	ENST00000401547.6	2666	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_9	92.8595115692996	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	18	True	NA	0	True	AATAAA	-19	NA	68213286	68165714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213137
transcript_25436.known	chr11	-	2869	10	FSM	ENSG00000110066.15	ENST00000405515.5	2869	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_9	55.8412653293265	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	27	False	NA	0	True	AATAAA	-19	NA	68213828	68165714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_25445.known	chr11	-	980	5	FSM	ENSG00000171067.11	ENST00000533310.5	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	110.209743217195	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCCTTTCCTTTTGCCT	-5	True	NA	NA	False	NA	NA	NA	68271947	68261608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271645
transcript_25446.nic	chr11	-	944	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_1	91.9575309585898	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTGTAAATGATTC	23	False	68271999	-5	True	ACTAAA	-21	NA	68271976	68261462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
transcript_25447.nnic	chr11	-	567	4	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	107.211110535346	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTGTAAATGATTC	-7	True	NA	-5	True	ACTAAA	-21	NA	68271949	68261462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_68261726_68262730_68262919_68263691_68263715_68271856
transcript_2545.known	chr1	+	1867	10	FSM	ENSG00000188782.9	ENST00000456354.7	1867	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.28251539824157	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGACTGGTGG	0	True	NA	NA	False	AATAAA	-15	NA	26190601	26202964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26190841_26191286_26191431_26193786_26193889_26197685_26197784_26197956_26198078_26198285_26198420_26199883_26200059_26200829_26201042_26201353_26201520_26202488
transcript_25450.known	chr11	-	2071	4	FSM	ENSG00000171067.11	ENST00000304271.11	2071	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	14.6590889515307	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	26	False	68271999	-24	True	ATTAAA	-18	NA	68271973	68261337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68262919_68263691_68263867_68268053_68268252_68271856
transcript_25453.known	chr11	-	687	3	FSM	ENSG00000171067.11	ENST00000532534.5	687	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	19.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTGTGGCCGAATCCC	26	True	NA	-78	True	GGGGCT	-2	NA	68271916	68267179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68267398_68268053_68268252_68271645
transcript_25454.known	chr11	-	610	3	FSM	ENSG00000171067.11	ENST00000529590.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	139.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGGGCTGCCT	28	False	68271999	1	True	AATAAA	-34	NA	68271971	68267100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68267398_68268053_68268252_68271856
transcript_25455.nic	chr11	-	1085	3	NIC	ENSG00000171067.11	novel	687	3	NA	NA	8	-16	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	21	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCCACCATTCACTTC	-21	True	NA	-15	True	AATAAA	-18	NA	68271963	68267116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_68267686_68268053_68268252_68271645
transcript_25457.known	chr11	+	635	3	FSM	ENSG00000286369.2	ENST00000668632.2	642	3	2	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACCCAGTCTTGGGTCT	-2	True	NA	NA	False	ATTAAA	-16	NA	68272101	68284879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68272177_68282813_68282996_68284501
transcript_25459.nnic	chr11	+	432	2	FSM	ENSG00000286369.2	ENST00000692178.1	433	2	-2	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTGTTGAATTTACA	-4	True	NA	NA	False	AATAAA	-15	NA	68272099	68274715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68272177_68274360
transcript_25462.known	chr11	+	4292	24	FSM	ENSG00000110075.15	ENST00000524904.5	4292	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	150.083870692243	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAATCAAACGTCTAA	9	True	NA	-4	True	NA	NA	NA	68460754	68614575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587944_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_25467.known	chr11	+	2771	23	FSM	ENSG00000110075.15	ENST00000524845.5	2771	23	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_14	112.209082070809	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGACGTCTGCTGCTGC	3	True	NA	NA	False	NA	NA	NA	68460748	68613117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_25477.nic	chr11	+	928	6	ISM	ENSG00000110075.15	ENST00000524845.5	2771	23	-41	61898	-23	0	5prime_fragment	FALSE	canonical	3	613	junction_1	37.5307873618447	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAACAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	68460707	68551219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120
transcript_25479.nnic	chr11	+	1317	3	NNC	ENSG00000110075.15	novel	538	5	NA	NA	-14	-31242	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	127	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	68460716	68506427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_68460828_68505144_68506073_68506149
transcript_25481.known	chr11	+	538	5	FSM	ENSG00000110075.15	ENST00000528635.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	272.530732211984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATCCCACATAGACACA	-8	True	NA	NA	False	NA	NA	NA	68460737	68537689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68460828_68505144_68505272_68515027_68515167_68519500_68519652_68537658
transcript_25482.known	chr11	+	2968	19	FSM	ENSG00000110075.15	ENST00000534534.5	2968	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	219.003185049278	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTGTGTTTTGGGATTTT	2	True	NA	NA	False	NA	NA	NA	68460747	68613882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68460828_68519500_68519652_68544837_68545025_68548066_68548205_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_25483.known	chr11	+	500	4	FSM	ENSG00000110075.15	ENST00000529172.1	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_3	13.0213499897497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAACAAAAAACT	NA	False	NA	NA	False	NA	NA	NA	68537815	68551219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68537892_68544837_68545025_68548066_68548205_68551120
transcript_25487.nnic	chr11	-	1583	7	NNC	ENSG00000260808.1	novel	503	3	NA	NA	-19955	0	at_least_one_novel_splicesite	TRUE	canonical	3	12	junction_4	13.5246688191122	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGAGTGAGTGCATC	NA	False	NA	-8	True	AATAAA	-35	NA	68636666	68612898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_68613222_68615881_68616020_68616188_68616287_68616474_68616616_68616710_68616905_68617558_68617678_68636096
transcript_25496.nnic	chr11	-	1472	6	NNC	ENSG00000260808.1	novel	503	3	NA	NA	-19963	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	14.218298069741	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGAGTGAGTGCATC	NA	False	NA	-8	True	AATAAA	-35	NA	68636674	68612898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_68613222_68615881_68616020_68616188_68616287_68616474_68616616_68616710_68616905_68636096
transcript_2550.known	chr1	+	1078	4	FSM	ENSG00000236155.7	ENST00000451482.2	1083	4	5	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	14.8996644257513	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	1	True	NA	NA	False	AATAAA	-44	NA	26225319	26229840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26225704_26227403_26227556_26227793_26227997_26229501
transcript_25500.nnic	chr11	-	1678	6	NNC	ENSG00000260808.1	novel	503	3	NA	NA	-19955	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_5	12.416118556135	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGAGTGAGTGCATC	NA	False	NA	-8	True	AATAAA	-35	NA	68636666	68612898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_68613222_68615881_68616020_68616188_68616287_68616474_68616905_68617558_68617678_68636096
transcript_25507.nnic	chr11	-	1514	5	NNC	ENSG00000260808.1	novel	503	3	NA	NA	-19910	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	12.3970762682174	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGAGTGAGTGCATC	NA	False	NA	-8	True	AATAAA	-35	NA	68636621	68612898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_68613222_68615881_68616020_68616188_68616287_68616474_68616905_68636096
transcript_2552.nnic	chr1	+	786	3	FSM	ENSG00000236155.7	ENST00000692018.1	935	3	145	4	140	0	multi-exon	FALSE	canonical	3	35	junction_1	2.5	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	111	False	NA	NA	False	AATAAA	-44	NA	26225459	26229840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26225704_26227793_26227997_26229501
transcript_25521.known	chr11	-	503	3	FSM	ENSG00000260808.1	ENST00000565199.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGAGTGAGTGCATC	NA	False	NA	-8	True	AATAAA	-35	NA	68616230	68612898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68613222_68615881_68616020_68616188
transcript_25522.nnic	chr11	+	759	6	NNC	ENSG00000069482.7	novel	749	6	NA	NA	-759	0	at_least_one_novel_splicesite	FALSE	canonical	2	54	junction_1	1814.23059173855	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	NA	False	NA	17	True	AATAAA	-13	NA	68683019	68691175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_68683219_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_25524.nnic	chr11	+	550	5	NNC	ENSG00000069482.7	novel	749	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1985.682549528	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	0	True	NA	17	True	AATAAA	-13	NA	68684542	68691175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_68684614_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_25526.nic	chr11	+	704	5	ISM	ENSG00000069482.7	ENST00000265643.4	749	6	236	0	236	0	3prime_fragment	FALSE	canonical	3	4321	junction_2	237.037444299419	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	237	False	NA	17	True	AATAAA	-13	NA	68684779	68691175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_25527.nnic	chr11	+	478	4	NNC	ENSG00000069482.7	novel	749	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	2211.83850123728	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	-2	True	NA	17	True	AATAAA	-13	NA	68684540	68691175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_68684595_68688013_68688101_68688848_68688927_68690916
transcript_25528.nnic	chr11	+	495	4	NNC	ENSG00000069482.7	novel	749	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2211.83850123728	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	0	True	NA	17	True	AATAAA	-13	NA	68684542	68691175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_68684614_68688013_68688101_68688848_68688927_68690916
transcript_25529.known	chr11	+	749	6	FSM	ENSG00000069482.7	ENST00000265643.4	749	6	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_3	213.011173415856	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	1	True	NA	17	True	AATAAA	-13	NA	68684543	68691175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68684733_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_2553.known	chr1	+	3935	14	FSM	ENSG00000130695.16	ENST00000252992.8	3935	14	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	51.6422605713874	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	-8	True	NA	17	True	AATAAA	-15	NA	26234201	26278808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
transcript_25532.known	chr11	-	643	2	FSM	ENSG00000132749.11	ENST00000432435.2	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	6884	False	NA	-36	True	ACTAAA	-19	NA	68750611	68747145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68747367_68750189
transcript_25533.known	chr11	-	398	2	FSM	ENSG00000132749.11	ENST00000538944.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTAGTCCATATTAGTA	4197	False	NA	-1	True	ATTAAA	-17	NA	68747366	68744872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68745112_68747207
transcript_25535.nic	chr11	-	1373	8	ISM	ENSG00000110090.13	ENST00000539743.5	2382	18	34485	-99	-7131	99	3prime_fragment	FALSE	canonical	2	3	junction_2	2.1946130708196	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTGTTTTTTTTTCCT	NA	False	NA	4	True	NA	NA	NA	68781018	68757513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_68757731_68759568_68759662_68760224_68760339_68761534_68761688_68762626_68762762_68773264_68773430_68775315_68775433_68780639
transcript_25537.nic	chr11	-	847	4	ISM	ENSG00000110090.13	ENST00000265641.10	5238	19	50	52295	50	338	5prime_fragment	FALSE	canonical	2	5	junction_1	2.16024689946929	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTAGTGTTCTTGACTC	-6	True	NA	-1	True	AATAAA	-19	NA	68841866	68807177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_68807639_68812436_68812577_68815333_68815488_68841774
transcript_25538.known	chr11	+	3252	2	FSM	ENSG00000250508.1	ENST00000512200.1	3252	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTATTGGTTCCTCTG	NA	False	NA	9	True	AATAAA	-14	NA	68870663	68874542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68870916_68871542
transcript_2554.known	chr1	+	3934	14	FSM	ENSG00000130695.16	ENST00000451429.8	3934	14	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_13	27.4042712517636	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	-10	True	NA	17	True	AATAAA	-15	NA	26234199	26278808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277135
transcript_2555.nic	chr1	+	2339	10	ISM	ENSG00000130695.16	ENST00000451429.8	3934	14	-29	7267	-29	-852	5prime_fragment	FALSE	canonical	3	229	junction_9	26.6268220845257	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACCCATAAATGATTCA	-1	True	NA	NA	False	AGTAAA	-8	NA	26234170	26271541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013
transcript_25550.known	chr11	-	693	7	FSM	ENSG00000197345.13	ENST00000362034.7	693	7	0	0	0	0	multi-exon	TRUE	canonical	3	1274	junction_2	67.6816485877491	7545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTTTCTGTGTTCTG	-13	True	NA	-9	True	AATAAA	-18	NA	68903832	68891277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_25551.known	chr11	-	764	7	FSM	ENSG00000197345.13	ENST00000541279.1	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	513.307061016005	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACCAGGTTTCTGTG	-8	True	NA	-14	True	AATAAA	-13	NA	68903827	68891282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68891396_68892889_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_25552.known	chr11	-	2283	6	FSM	ENSG00000197345.13	ENST00000565125.5	2283	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	644.628885483733	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGGTTTCTGTGTTCT	-16	True	NA	-10	True	AATAAA	-17	NA	68903835	68891278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_25553.known	chr11	+	2512	14	FSM	ENSG00000132740.10	ENST00000674955.1	2512	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	31.9409588470823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCCAGCAGGGACCGGT	32	True	NA	NA	False	NA	NA	NA	68903932	68936860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68930322_68930435_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236
transcript_25554.known	chr11	+	2914	14	FSM	ENSG00000132740.10	ENST00000675615.1	2914	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	24.8477017855509	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCCCCGCGGAGCTCTCT	-38	True	NA	NA	False	NA	NA	NA	68903862	68939746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68939533
transcript_25557.nic	chr11	+	741	2	ISM	ENSG00000132740.10	ENST00000545146.1	477	3	-73	1569	-10	385	5prime_fragment	FALSE	canonical	3	91	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCCATTTCTTTTCTTT	-48	True	NA	NA	False	AATAAA	-20	NA	68903852	68906623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_68904039_68906068
transcript_25559.known	chr11	-	2132	3	FSM	ENSG00000172935.9	ENST00000309099.7	2132	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGGCTTCATGCCC	4	True	NA	-22	True	AATAAA	-17	NA	69013246	69004397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69006262_69009853_69009958_69013082
transcript_25560.nnic	chr11	-	995	6	NIC	ENSG00000149716.13	novel	1000	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	29.4482597108895	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGATGTGCAAATTGT	NA	False	NA	-13	True	AATAAA	-18	NA	69675418	69653075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_69653320_69654157_69654385_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_25561.nic	chr11	-	1480	6	NIC	ENSG00000149716.13	novel	2484	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	21.811923344813	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	NA	False	NA	2	True	AGTAAA	-21	NA	69675418	69665562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_69666410_69667478_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_25562.known	chr11	+	4238	5	FSM	ENSG00000110092.4	ENST00000227507.3	4238	5	0	0	0	0	multi-exon	TRUE	canonical	3	441	junction_1	8.24621125123532	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTGCCTGCCTCTTTG	0	True	NA	27	True	AATAAA	-16	NA	69641155	69654474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_69641512_69643030_69643247_69643831_69643992_69647993_69648143_69651117
transcript_25565.known	chr11	-	2484	5	FSM	ENSG00000149716.13	ENST00000279147.9	2484	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.7169905660283	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-19	True	NA	2	True	AGTAAA	-21	NA	69675353	69665562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_25567.known	chr11	-	444	4	FSM	ENSG00000149716.13	ENST00000543562.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	21.4527905462721	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCGAGGAACAGATGTGTG	-16	True	NA	96	True	NA	NA	NA	69675350	69667493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69675189
transcript_25568.known	chr11	-	817	4	FSM	ENSG00000149716.13	ENST00000539414.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	2.16024689946929	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGACCGAACGTCGAGG	12	True	NA	84	True	NA	NA	NA	69675322	69667505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69668013_69671748_69671820_69673215_69673322_69675189
transcript_25572.known	chr11	-	2274	3	FSM	ENSG00000149716.13	ENST00000536870.5	2274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGGGACCATTTATA	11	True	NA	-1	True	AGTAAA	-18	NA	69675323	69665565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69667588_69667894_69668013_69675189
transcript_25575.known	chr11	-	775	3	FSM	ENSG00000149716.13	ENST00000542341.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	2.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATCACTTGGGCTCAG	NA	False	NA	56	True	AATAAA	-15	NA	69675416	69671377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69671820_69673215_69673322_69675189
transcript_25577.known	chr11	+	476	2	FSM	ENSG00000110092.4	ENST00000542367.1	476	2	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGGTTGTTTTTTCCTT	4089	False	NA	NA	False	NA	NA	NA	69647956	69651407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_69648143_69651117
transcript_25578.nic	chr11	-	1661	2	ISM	ENSG00000162344.4	ENST00000294312.4	1821	3	440	0	440	0	3prime_fragment	FALSE	canonical	3	97	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	804	False	NA	-6	True	ATTAAA	-17	NA	69703582	69698237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_69699577_69703260
transcript_25583.nnic	chr11	-	933	5	NNC	ENSG00000254721.1	novel	976	2	NA	NA	-12473	-33	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	7.69740215917033	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGGTCTGTGGCTCAC	NA	False	NA	-2	True	AATAAA	-19	NA	70219863	70206603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_70206935_70208527_70208578_70209149_70209258_70217499_70217688_70219607
transcript_25584.nnic	chr11	-	1010	5	NNC	ENSG00000254721.1	novel	976	2	NA	NA	-12473	-33	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	8.22724133595217	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGGTCTGTGGCTCAC	NA	False	NA	-2	True	AATAAA	-19	NA	70219863	70206603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_70206935_70208527_70208655_70209149_70209258_70217499_70217688_70219607
transcript_2559.known	chr1	-	1792	16	FSM	ENSG00000158062.21	ENST00000374221.7	1792	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	63.9279455498315	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	-9	True	NA	NA	False	AATAAA	-15	NA	26306645	26282283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26303042_26303168_26306591
transcript_25595.known	chr11	+	1708	2	FSM	ENSG00000168040.5	ENST00000301838.5	1708	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTATTCCTGTTGGTGG	-18	True	NA	26	True	ATTAAA	-33	NA	70203295	70207390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_70203746_70206132
transcript_25596.known	chr11	-	976	2	FSM	ENSG00000254721.1	ENST00000526174.1	976	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATTCTCAGTGACTCCC	NA	False	NA	NA	False	NA	NA	NA	70207390	70206290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_70206935_70207058
transcript_25598.known	chr11	-	554	2	FSM	ENSG00000246889.3	ENST00000530690.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTGGTTCATGTCCCCA	10	True	NA	NA	False	NA	NA	NA	70398362	70372245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_70372535_70398097
transcript_25599.known	chr11	-	392	2	FSM	ENSG00000246889.3	ENST00000524619.2	513	2	121	0	60	0	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGGCTCGCGTCTGTAAT	9225	False	NA	NA	False	ATTAAA	-32	NA	70398302	70381090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_70381278_70398097
transcript_25600.known	chr11	+	3249	18	FSM	ENSG00000085733.16	ENST00000301843.13	3249	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	204.508153321785	1434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGATTTGCTTTGGT	-26	True	NA	24	True	AATAAA	-15	NA	70398528	70436575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70421469_70421581_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_25606.known	chr11	-	2710	10	FSM	ENSG00000172893.18	ENST00000682708.1	2710	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	418.47946392672	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71440785_71440837_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_25610.known	chr11	-	2695	9	FSM	ENSG00000172893.18	ENST00000683287.1	2695	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	330.690470833376	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAAATAAGTGGCTGTGT	NA	False	NA	NA	False	ATTAAA	-9	NA	71448435	71434420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443956_71444216_71444854_71444959_71447609_71447735_71448289
transcript_25613.known	chr11	-	2627	9	FSM	ENSG00000172893.18	ENST00000355527.8	2627	9	0	0	0	0	multi-exon	TRUE	canonical	3	859	junction_3	56.6700979353309	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGTGGTTTCTGAC	24	False	71448417	NA	False	ATTAAA	-19	NA	71448393	71434410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_25614.known	chr11	-	2601	9	FSM	ENSG00000172893.18	ENST00000407721.6	2601	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	309.120526655866	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCTGTGTGGTTTCT	24	False	71448417	NA	False	ATTAAA	-16	NA	71448393	71434413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448312
transcript_25623.known	chr11	+	680	2	FSM	ENSG00000254682.2	ENST00000529369.2	792	2	112	0	112	0	multi-exon	FALSE	canonical	3	285	junction_1	0	1366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAATTGTGTGTTTTT	6	True	NA	19	True	AATAAA	-19	NA	71448673	71452157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71448886_71451689
transcript_25625.known	chr11	+	2679	21	FSM	ENSG00000172890.13	ENST00000319023.7	2679	21	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_10	21.5752172642595	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTCTGGGGACCAGTC	-24	True	NA	NA	False	NA	NA	NA	71453202	71501816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_25626.nnic	chr11	+	2302	20	NIC	ENSG00000172890.13	novel	2679	21	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	36.8766003925212	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAATCCAATGCACATG	3	True	NA	24	True	AATAAA	-19	NA	71453187	71501541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_71453382_71455109_71455171_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_25628.nnic	chr11	+	2158	18	NIC	ENSG00000172890.13	novel	2679	21	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	40.5274907766385	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAATCCAATGCACATG	3	True	NA	24	True	AATAAA	-19	NA	71453187	71501541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_71453382_71455109_71455171_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_25630.nnic	chr11	+	1060	6	NNC	ENSG00000172890.13	novel	559	7	NA	NA	-15	1352	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_5	66.5293920008292	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTAGTCTGTTGATTTT	3	True	NA	NA	False	ATTAAA	-18	NA	71453187	71465860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71465316
transcript_25632.known	chr11	+	839	5	FSM	ENSG00000172890.13	ENST00000524949.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	27.2614654778499	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAATAAAAAGGGTGT	4	True	NA	NA	False	AATGAA	-45	NA	71453230	71464508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052
transcript_25636.known	chr11	+	720	4	FSM	ENSG00000172890.13	ENST00000527538.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	86.6525629549794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCGACCCCCACGTCTG	14	True	NA	NA	False	NA	NA	NA	71453240	71460075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71459674
transcript_25637.nnic	chr11	+	598	4	NIC	ENSG00000172890.13	novel	603	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	86.6525629549794	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTCTTATTTATTTGC	3	True	NA	25	True	AATAAA	-31	NA	71453187	71460947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_71453382_71455109_71455171_71458427_71458545_71460721
transcript_25639.nnic	chr11	+	765	4	NIC	ENSG00000172890.13	novel	839	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	75.6497778508892	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAATAAAAAGGGTGT	3	True	NA	NA	False	AATGAA	-45	NA	71453187	71464508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_71453382_71455109_71455171_71463431_71463486_71464052
transcript_25640.known	chr11	+	963	3	FSM	ENSG00000172890.13	ENST00000534634.5	963	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	10	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGAGGCCTCTGCACGC	0	True	NA	NA	False	NA	NA	NA	71453108	71459056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427
transcript_25643.known	chr11	+	524	2	FSM	ENSG00000172890.13	ENST00000533612.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTGCGTCCCCACA	-18	True	NA	NA	False	NA	NA	NA	71453208	71455460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109
transcript_25645.nnic	chr11	+	639	2	Genic_Genomic	ENSG00000284625.1	novel	219	1	NA	NA	-115	6186	multi-exon	FALSE	canonical	3	17	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATTTTATTTTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	71639435	71645955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr11_+_71639770_71645650
transcript_2565.known	chr1	-	2043	16	NIC	ENSG00000158062.21	novel	1944	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	60.7425898544195	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	NA	False	NA	NA	False	AATAAA	-15	NA	26318363	26282283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591_26306705_26318046
transcript_25652.known	chr11	-	347	3	FSM	ENSG00000254972.1	ENST00000532530.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTGCCTGACGTT	NA	False	NA	NA	False	GATAAA	-17	NA	71705404	71701267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71701486_71704176_71704261_71705359
transcript_25656.nnic	chr11	+	1241	4	Fusion	ENSG00000284625.1_ENSG00000255319.5	novel	125	2	NA	NA	-128	476	multi-exon	FALSE	canonical	1	4	junction_2	5.65685424949238	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAGAAAGTACTTATA	NA	False	NA	NA	False	AAAAAG	-6	NA	71639422	71731995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_71639770_71714374_71714559_71722172_71722309_71731421
transcript_25658.nnic	chr11	+	2354	4	Fusion	ENSG00000284625.1_ENSG00000255319.5	novel	317	3	NA	NA	-128	4156	multi-exon	FALSE	canonical	1	1	junction_2	6.12825877028341	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAACAAAATTAAGGCTGG	NA	False	NA	NA	False	AAAAAG	-8	NA	71639422	71735675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_71639770_71714374_71714559_71731421_71731596_71734026
transcript_25660.nnic	chr11	+	1103	3	Fusion	ENSG00000284625.1_ENSG00000255319.5	novel	317	3	NA	NA	-128	474	multi-exon	FALSE	canonical	1	1	junction_2	7.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAGAAAGTACTTA	NA	False	NA	NA	False	AAAAAG	-4	NA	71639422	71731993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_71639770_71714374_71714559_71731421
transcript_25663.known	chr11	+	1145	2	FSM	ENSG00000285933.1	ENST00000648998.1	1145	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGCCACTCAGTACAAG	NA	False	NA	15	True	AATAAA	-15	NA	71745330	71747051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71746013_71746588
transcript_25665.known	chr11	+	2010	4	FSM	ENSG00000158483.18	ENST00000346333.11	2044	4	29	5	-1	1	multi-exon	FALSE	canonical	3	48	junction_2	18.8738502225228	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	-14	True	NA	NA	False	AATAAA	-18	NA	71787509	71801234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71787633_71789782_71789846_71796016_71796167_71799560
transcript_25666.known	chr11	+	2111	5	FSM	ENSG00000158483.18	ENST00000359244.9	2111	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	40.106109260311	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	-10	True	NA	NA	False	AATAAA	-21	NA	71787513	71801237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71787633_71789782_71789846_71793379_71793482_71796016_71796167_71799560
transcript_25677.nic	chr11	-	1293	6	NIC	ENSG00000254469.9	novel	1167	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	8.15843122174846	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCTTTTTGTTCCTTA	-14	True	NA	NA	False	AATAAA	-43	NA	71928667	71865508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_71865855_71916073_71916253_71917620_71917777_71918884_71919027_71923308_71923476_71928364
transcript_25678.nic	chr11	-	1203	6	NIC	ENSG00000254469.9	novel	1167	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	8.89044430835715	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCTTTTTGTTCCTTA	-8	True	NA	NA	False	AATAAA	-43	NA	71928661	71865508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_71865855_71916073_71916253_71917620_71917777_71918884_71919027_71923308_71923476_71928448
transcript_25689.known	chr11	-	541	2	FSM	ENSG00000254469.9	ENST00000531488.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTGTATTGTGTTTCA	2	True	NA	NA	False	NA	NA	NA	71928447	71927577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71928036_71928364
transcript_25690.known	chr11	-	754	4	FSM	ENSG00000254469.9	ENST00000532852.5	754	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	8.64098759787715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCTTTTTGTTCCTTA	9696	False	NA	NA	False	AATAAA	-43	NA	71918957	71865508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71865855_71916073_71916253_71917620_71917777_71918884
transcript_25691.known	chr11	+	2375	9	FSM	ENSG00000137522.18	ENST00000526549.5	2375	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	99.183857053454	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTATCTTGCTTTCTT	6	True	NA	28	True	AATAAA	-27	NA	71929050	71997595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71960749_71960892_71962151_71962290_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_25694.known	chr11	+	2202	8	FSM	ENSG00000137522.18	ENST00000530137.1	2202	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	56.4920077424719	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACATTTATCTTGCTT	12	False	NA	24	True	AATAAA	-23	NA	71929081	71997591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_25700.known	chr11	+	2132	7	FSM	ENSG00000137522.18	ENST00000393713.7	2132	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	92.9134902297113	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	-11	True	NA	30	True	AATAAA	-29	NA	71929033	71997597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71995439_71995552_71996194
transcript_25702.known	chr11	+	786	7	FSM	ENSG00000137522.18	ENST00000530655.5	786	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	93.2880842694643	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTCCAAGGCATCAACT	-18	True	NA	NA	False	NA	NA	NA	71929026	71996275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71960749_71960892_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_25713.known	chr11	+	870	5	FSM	ENSG00000137522.18	ENST00000533380.5	870	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	109.736901268443	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTCCCTGCCTAAGCAG	-13	True	NA	71	True	NA	NA	NA	71929031	71996593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71960749_71960892_71994718_71994853_71995449_71995552_71996194
transcript_25720.known	chr11	+	2282	9	FSM	ENSG00000137522.18	ENST00000361756.8	2282	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_6	18.9930085821073	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	1	True	NA	30	True	AATAAA	-29	NA	71929045	71997597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_25721.known	chr11	+	721	6	FSM	ENSG00000137522.18	ENST00000528683.5	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_5	11.2605506082074	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGCACTAGGGTGAGA	2	True	NA	NA	False	NA	NA	NA	71929046	71990796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596
transcript_25722.known	chr11	+	578	3	FSM	ENSG00000137522.18	ENST00000526903.1	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTGATCATTGTGGTC	NA	False	NA	NA	False	ATTAAA	-21	NA	71957238	71983170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71957265_71960749_71960892_71982760
transcript_25724.known	chr11	-	2276	7	FSM	ENSG00000137497.19	ENST00000540626.5	2276	7	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_6	38.8873015549064	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTTGACTTGATCG	8240	False	NA	-6	True	AATAAA	-20	NA	72007916	72002863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72003539_72003886_72004100_72004224_72004342_72004639_72004817_72005232_72005370_72006034_72006264_72007188
transcript_25726.known	chr11	+	2642	6	FSM	ENSG00000184154.16	ENST00000289488.8	2129	6	-513	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	5.97996655509042	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTTGCTGACTCCAT	9	True	NA	12	True	GATAAA	-21	NA	72080336	72096895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72080886_72088296_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_25730.known	chr11	+	814	6	FSM	ENSG00000184154.16	ENST00000538478.5	814	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	13.1909059582729	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTAGAGATGTTCTCTA	14	True	NA	26	True	AATAAA	-38	NA	72080844	72095618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72080886_72088339_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_25733.known	chr11	-	812	6	FSM	ENSG00000110200.9	ENST00000542531.5	812	6	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_5	385.235512381712	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	486	False	NA	-7	True	AATAAA	-19	NA	72112279	72109588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112215
transcript_25736.known	chr11	-	734	6	FSM	ENSG00000110200.9	ENST00000535503.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	380.1965807316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCTTGATTGCCAGGT	-15	False	NA	-68	True	NA	NA	NA	72112780	72109649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112733
transcript_25738.known	chr11	-	849	6	FSM	ENSG00000110200.9	ENST00000538919.5	849	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	350.673637446558	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACCAGCTGATGGCCCC	3	True	NA	NA	False	NA	NA	NA	72112232	72109801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72111923
transcript_2575.known	chr1	-	1555	14	FSM	ENSG00000158062.21	ENST00000357089.8	1555	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	46.1838364101785	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	4	True	NA	NA	False	AATAAA	-15	NA	26306632	26282283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_25751.known	chr11	+	1619	5	FSM	ENSG00000184154.16	ENST00000538413.6	1619	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	15.5463018110418	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTCCTGAGTAGCTG	9	True	NA	NA	False	NA	NA	NA	72080336	72095956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72080886_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_25752.known	chr11	+	1270	5	FSM	ENSG00000184154.16	ENST00000423494.6	1270	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.7779617355625	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACTATAGGCACCTACTA	-19	True	NA	NA	False	NA	NA	NA	72080811	72096135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72080886_72088296_72088381_72093495_72093702_72094947_72095097_72095378
transcript_25754.known	chr11	-	899	5	FSM	ENSG00000149357.10	ENST00000535872.1	899	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	508.306256109444	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGTGACCAGGGTCTG	-31	True	NA	-94	True	NA	NA	NA	72103297	72097426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099239_72103219
transcript_25758.known	chr11	-	704	5	FSM	ENSG00000110200.9	ENST00000545944.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	347.917734529299	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	21	True	NA	-8	True	AATAAA	-18	NA	72112686	72109589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72112649
transcript_25762.known	chr11	+	2049	4	FSM	ENSG00000184154.16	ENST00000642510.1	2049	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	16.9705627484771	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGATTTCATTTGAT	338	False	NA	-31	True	NA	NA	NA	72080665	72096852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72080886_72093495_72093702_72094947_72095097_72095378
transcript_2577.known	chr1	-	2646	14	FSM	ENSG00000158062.21	ENST00000472155.5	2646	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	55.8762368646444	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-4	True	NA	NA	False	AATAAA	-18	NA	26306640	26282280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
transcript_25770.known	chr11	-	1089	5	FSM	ENSG00000149357.10	ENST00000278671.10	1089	5	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	112.732814654829	6936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTTCTGGCCCCTC	-31	True	NA	-16	True	GATAAA	-18	NA	72103297	72097291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099257_72103182
transcript_25771.known	chr11	-	848	6	FSM	ENSG00000110200.9	ENST00000535234.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	310.824709442477	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-9	True	NA	-7	True	AATAAA	-19	NA	72112774	72109588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111441_72111497_72112649
transcript_25772.known	chr11	-	867	6	FSM	ENSG00000110200.9	ENST00000538393.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_4	258.699516814392	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-4	True	NA	-8	True	AATAAA	-18	NA	72112769	72109589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
transcript_25773.known	chr11	-	872	6	FSM	ENSG00000110200.9	ENST00000545680.5	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	323.88183030235	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	11	True	NA	-5	True	AATAAA	-21	NA	72112754	72109586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
transcript_25774.known	chr11	-	500	2	FSM	ENSG00000110200.9	ENST00000543015.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	2520	False	NA	-5	True	AATAAA	-21	NA	72110245	72109586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087
transcript_25775.known	chr11	-	280	4	FSM	ENSG00000137497.19	ENST00000546131.1	280	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	118.662921289208	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGAGAGACTGGACTTT	-21	True	NA	NA	False	NA	NA	NA	72080536	72024312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72024354_72029204_72029291_72035901_72035976_72080457
transcript_25776.known	chr11	+	1061	6	FSM	ENSG00000110195.14	ENST00000393681.6	1061	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	10.6131993291373	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCTTGAGAATTAT	-3	True	NA	12	True	AATAAA	-12	NA	72189667	72196298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72189760_72190575_72190642_72192165_72192342_72195270_72195460_72195611_72195748_72195896
transcript_25777.known	chr11	+	1130	5	FSM	ENSG00000110195.14	ENST00000312293.9	1130	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	12.0830459735946	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATGGGAACGTGACTG	15	False	NA	37	True	AATAAA	-37	NA	72189557	72196323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72189760_72192165_72192342_72195270_72195460_72195611_72195748_72195896
transcript_25779.known	chr11	+	930	4	FSM	ENSG00000110195.14	ENST00000393676.5	930	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	4.10960933531265	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCTTGAGAATTATT	2	True	NA	13	True	AATAAA	-13	NA	72192139	72196299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72192342_72195270_72195460_72195611_72195748_72195896
transcript_25781.known	chr11	-	10053	17	FSM	ENSG00000162129.14	ENST00000294053.9	10053	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	23.0467425843654	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-8	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72372924_72373015_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_25782.known	chr11	-	9963	16	FSM	ENSG00000162129.14	ENST00000538039.6	9963	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	11.9825799485012	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-8	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_25783.known	chr11	-	2071	15	FSM	ENSG00000162129.14	ENST00000340729.9	2071	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.5720802811202	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTTACCTTCCCCTC	-11	True	NA	-18	True	AATAAA	-23	NA	72434534	72293302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72430311_72430364_72434071
transcript_25785.known	chr11	-	612	3	FSM	ENSG00000162129.14	ENST00000542555.2	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	41.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTATGTGTGATTCAGA	298	False	NA	2	True	ATTAAA	-38	NA	72434330	72428805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72429107_72430311_72430364_72434071
transcript_25786.nnic	chr11	-	791	3	NNC	ENSG00000162129.14	novel	612	3	NA	NA	-29	-22	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	46	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAGAAAGTAATTGAACTT	65	False	NA	-20	True	ATTAAA	-16	NA	72434563	72428827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_72429075_72430311_72430364_72434071
transcript_25791.known	chr11	+	664	2	FSM	ENSG00000256633.1	ENST00000545254.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGACTCCAGAGACCAGC	NA	False	NA	NA	False	NA	NA	NA	72584571	72587979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72585057_72587800
transcript_25795.known	chr11	-	5156	35	FSM	ENSG00000186635.15	ENST00000393609.8	5156	35	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	65.914356722533	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTGAGGCCTGTGATT	-2	True	NA	-3	True	TATAAA	-23	NA	72752408	72685068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72685682_72686041_72686192_72687438_72687503_72687687_72687739_72688454_72688538_72692752_72692786_72693324_72693471_72693691_72693806_72694979_72695098_72695386_72695456_72695541_72695629_72695717_72695866_72696548_72696655_72696982_72697196_72697322_72697487_72697597_72697650_72697910_72698107_72699004_72699108_72699416_72699553_72701648_72701784_72702904_72703080_72704151_72704335_72705804_72705891_72707174_72707375_72709869_72709977_72710384_72710588_72711020_72711142_72711429_72711500_72712195_72712340_72712437_72712569_72713175_72713244_72714151_72714322_72726619_72727173_72732514_72732598_72752327
transcript_25796.nnic	chr11	+	514	3	Antisense	novelGene_ENSG00000285693.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTCTTTCTGGGAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	72793761	72810572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_72794017_72808516_72808619_72810415
transcript_25799.known	chr11	-	4710	20	FSM	ENSG00000137478.15	ENST00000409418.9	4710	20	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	9.33494907528837	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTCTAAGTTTTAATAT	3	True	NA	-5	True	AATAAA	-14	NA	73142318	72836744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72838875_72840876_72840960_72841453_72841584_72842620_72842842_72843150_72843329_72843448_72843533_72849754_72849890_72867864_72868027_72887469_72887575_72889828_72889946_72902542_72902639_72921827_72921951_72984087_72984217_72985061_72985117_72988963_72989098_73000989_73001135_73015808_73015886_73083694_73083741_73140030_73140129_73141856
transcript_25800.known	chr11	+	1575	13	FSM	ENSG00000168010.11	ENST00000541367.5	1575	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	27.1245839701839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGAAAAAAATGATATCT	7344	False	NA	-10	True	NA	NA	NA	72822340	72829612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72822544_72822847_72822962_72824059_72824123_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_25802.known	chr11	+	1400	12	FSM	ENSG00000168010.11	ENST00000540222.5	1400	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	23.46757918336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCTCCCAAAGTAGA	7442	False	NA	-24	True	NA	NA	NA	72822438	72829598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_25807.known	chr11	-	7296	9	FSM	ENSG00000054965.11	ENST00000064778.8	7296	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.17635004720366	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCCTGCTGCTCATG	8	True	NA	0	True	AATAAA	-19	NA	73598189	73400486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73406745_73407512_73407644_73409486_73409662_73411393_73411537_73419873_73420000_73425021_73425049_73430689_73430771_73468404_73468493_73597922
transcript_25808.known	chr11	-	7192	8	FSM	ENSG00000054965.11	ENST00000356467.5	7192	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	4.1206300291017	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGCCTGCTGCTCATG	9	True	NA	0	True	AATAAA	-19	NA	73598112	73400486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73406745_73407512_73407644_73409486_73409662_73411393_73411537_73419873_73420000_73430689_73430771_73468404_73468493_73597922
transcript_25816.known	chr11	+	2061	8	FSM	ENSG00000021300.14	ENST00000398494.8	2061	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	70.968230891846	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	1008	False	NA	33	True	AATAAA	-24	NA	73647608	73662819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73655802_73655908_73660752_73660853_73661465
transcript_25817.known	chr11	+	2275	7	FSM	ENSG00000021300.14	ENST00000398492.8	2275	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	42.6826142071401	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	NA	False	NA	33	True	AATAAA	-24	NA	73646177	73662819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73646627_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_25819.known	chr11	+	2016	7	FSM	ENSG00000021300.14	ENST00000227214.10	2016	7	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	15.9478316185409	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	948	False	NA	33	True	AATAAA	-24	NA	73647548	73662819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_25823.known	chr11	-	3389	8	FSM	ENSG00000175582.20	ENST00000310653.10	3389	8	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	91.794357569693	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-32	True	NA	NA	False	AATAAA	-17	NA	73761137	73675637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
transcript_25824.known	chr11	-	3326	8	FSM	ENSG00000175582.20	ENST00000336083.8	3326	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	141.451369013942	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	31	True	NA	NA	False	AATAAA	-17	NA	73761074	73675637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718612_73718719_73720845_73720900_73730764_73730824_73760565
transcript_25825.known	chr11	-	1812	2	FSM	ENSG00000175582.20	ENST00000541795.1	1812	2	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAAGTTCTGAAATCAG	3011	False	NA	NA	False	GATAAA	-44	NA	73761017	73729463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73730824_73760565
transcript_25830.known	chr11	+	1004	9	FSM	ENSG00000175581.14	ENST00000540162.5	1004	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	228.705289346355	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTGTACTTGCCA	-10	True	NA	-66	True	NA	NA	NA	73787876	73864515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73817822_73817948_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_25832.known	chr11	+	1560	9	FSM	ENSG00000175581.14	ENST00000508278.6	1560	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	234.29278558035	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	-15	True	NA	NA	False	NA	NA	NA	73787871	73865133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73823012_73823071_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_25843.known	chr11	+	1500	8	FSM	ENSG00000175581.14	ENST00000310614.12	1500	8	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_3	41.5790371044185	2904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCACTACTCAGGAGG	-13	True	NA	NA	False	NA	NA	NA	73787873	73865133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_25849.known	chr11	+	1058	8	FSM	ENSG00000175581.14	ENST00000398483.7	1058	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	246.869791342625	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTGTGTGTGAGAG	19	True	NA	24	True	AATAAA	-20	NA	73787905	73864605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73789334_73789491_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_25859.known	chr11	+	742	7	FSM	ENSG00000175581.14	ENST00000544819.5	742	7	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	164.274922005764	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTACTGGGTAGTTAGAGT	-2	True	NA	NA	False	NA	NA	NA	73787884	73864424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_25863.known	chr11	+	531	6	FSM	ENSG00000175581.14	ENST00000497094.6	531	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	246.950683335762	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACCTCTGCAACTCTC	4	True	NA	NA	False	NA	NA	NA	73787890	73844934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73843246_73843368_73844806
transcript_25868.known	chr11	+	661	6	FSM	ENSG00000175581.14	ENST00000542303.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	198.615205862995	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTATGTGTGTGTGA	22	True	NA	21	True	AATAAA	-17	NA	73787908	73864602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73863171_73863262_73864295
transcript_25869.known	chr11	+	699	6	FSM	ENSG00000175581.14	ENST00000543058.1	699	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	257.584471581654	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTGTGTGAGAGAG	24	False	NA	26	True	AATAAA	-22	NA	73787956	73864607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73844806_73844977_73863171_73863262_73864295
transcript_25890.known	chr11	+	287	3	FSM	ENSG00000175581.14	ENST00000537007.5	287	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	227.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAACTCTCTCTCCAT	-3	True	NA	NA	False	NA	NA	NA	73787929	73844941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73825707_73825797_73844806
transcript_2590.known	chr1	-	2542	13	FSM	ENSG00000158062.21	ENST00000475591.5	2542	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	47.9049985793642	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	0	True	NA	NA	False	AATAAA	-17	NA	26306636	26282281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_25902.known	chr11	-	582	3	FSM	ENSG00000181924.7	ENST00000537289.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	3.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGAGTTGAGAGCCAT	2	True	NA	NA	False	AAAACA	-16	NA	73876843	73872996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73873395_73876478_73876576_73876756
transcript_25907.known	chr11	-	566	2	FSM	ENSG00000181924.7	ENST00000537581.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTTTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	73876901	73876154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73876576_73876756
transcript_25908.known	chr11	+	1612	13	FSM	ENSG00000175575.13	ENST00000544552.5	1612	13	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	331.347207958996	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTAAATACTCTTACT	22	False	NA	34	True	AATAAA	-35	NA	73877027	73927745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73877069_73878782_73878820_73887039_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_25909.known	chr11	+	4954	12	FSM	ENSG00000175575.13	ENST00000310571.8	4954	12	0	0	0	0	multi-exon	FALSE	canonical	2	465	junction_8	118.750589385227	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATAAGGAGGGATATGG	-7	True	NA	NA	False	ATTAAA	-18	NA	73876998	73931114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_25910.known	chr11	-	818	2	FSM	ENSG00000181924.7	ENST00000355693.5	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_1	0	5731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTCTTTTGTTTTT	-1	True	NA	-4	True	AATAAA	-22	NA	73876846	73872666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73873395_73876756
transcript_25911.known	chr11	-	922	2	FSM	ENSG00000181924.7	ENST00000545127.1	922	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTTTCTTTTGTTT	171	False	NA	-6	True	AATAAA	-20	NA	73876674	73872668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73873395_73876478
transcript_25912.known	chr11	+	2020	2	FSM	ENSG00000175575.13	ENST00000381783.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCAGG	268	False	NA	NA	False	NA	NA	NA	73876973	73880703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73877069_73878778
transcript_25913.known	chr11	-	449	2	FSM	ENSG00000181924.7	ENST00000544575.1	449	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGATGATCACTTAC	279	False	NA	3	True	AATAAA	-32	NA	73876566	73875758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73876120_73876478
transcript_25917.known	chr11	-	1644	8	FSM	ENSG00000175567.11	ENST00000663595.2	1644	8	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_6	24.7204781672266	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTCCTCCCTCTCTTGT	-1	True	NA	-32	True	CATAAA	-16	NA	73982843	73974671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73975122_73975490_73975672_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_25922.known	chr11	-	1413	7	FSM	ENSG00000175567.11	ENST00000536983.5	1413	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.682843357725	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCACTTGTCATCCATA	9333	False	NA	-69	True	NA	NA	NA	73982830	73974708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73975122_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_25926.nnic	chr11	-	2033	8	NNC	ENSG00000168014.18	novel	2401	7	NA	NA	0	-1056	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	23.6202956659509	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGACCCTTATCTCA	-7	True	NA	NA	False	NA	NA	NA	74171002	74130229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_74130836_74132843_74132973_74133424_74133558_74138719_74138968_74139604_74139829_74161398_74161557_74168343_74168614_74170737
transcript_25931.known	chr11	-	936	4	FSM	ENSG00000168014.18	ENST00000541922.2	936	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	35.3679076125361	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGAGTTTCTTATATA	5	True	NA	NA	False	ATTAAA	-23	NA	74170877	74158326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74158695_74161398_74161557_74168343_74168614_74170737
transcript_25932.known	chr11	-	1091	3	FSM	ENSG00000168014.18	ENST00000542484.2	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATAAGAAGGGGATGC	NA	False	NA	NA	False	AATAAA	-1	NA	74078204	74056891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74057545_74074252_74074601_74078114
transcript_25933.known	chr11	+	2496	14	FSM	ENSG00000214517.10	ENST00000398427.6	2496	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	135.798711116227	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	4	True	NA	21	True	AATAAA	-17	NA	74171321	74254703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246033_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_25934.known	chr11	+	2487	14	FSM	ENSG00000214517.10	ENST00000328257.13	2487	14	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_9	37.8450593963077	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	-29	True	NA	21	True	AATAAA	-17	NA	74171288	74254703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246075_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_2594.known	chr1	-	1312	12	FSM	ENSG00000158062.21	ENST00000374223.5	1312	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	62.526291990511	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	16	True	NA	NA	False	AATAAA	-17	NA	26306620	26282281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26306591
transcript_25945.known	chr11	+	590	4	FSM	ENSG00000214517.10	ENST00000542710.3	590	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.65661502821	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATGTATATGTATTTA	-51	True	NA	NA	False	AATAAA	-5	NA	74171266	74205923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74205776
transcript_25947.known	chr11	-	8477	14	FSM	ENSG00000165434.8	ENST00000298198.5	8477	14	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_6	15.2358188987265	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTCTGTGTAATTT	-11	True	NA	-6	True	AATAAA	-17	NA	74398433	74330315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74336755_74338467_74338602_74342460_74342651_74342884_74343015_74343322_74343417_74345468_74345650_74346731_74346830_74347147_74347338_74351382_74351577_74368491_74368576_74370901_74370987_74371710_74371818_74374414_74374583_74398050
transcript_25950.known	chr11	-	663	1	FSM	ENSG00000165434.8	ENST00000622957.1	663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATCATTGTAAGTTAT	14	True	NA	NA	False	NA	NA	NA	74398408	74397745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74397700_74398400
transcript_25953.known	chr11	+	3788	12	FSM	ENSG00000077514.9	ENST00000263681.7	3788	12	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_8	45.8531612508256	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTGTATGTAGCATGA	-29	True	NA	NA	False	AATAAA	-35	NA	74592581	74643076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74640563
transcript_25955.nic	chr11	+	1867	12	NIC	ENSG00000077514.9	novel	3788	12	NA	NA	-1	224	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	106.809477401633	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGGGTTACTTTCTGT	-1	True	NA	7	True	AATAAA	-20	NA	74592554	74669341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74668776
transcript_25956.nic	chr11	+	1250	11	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-27	6853	-1	-4742	5prime_fragment	FALSE	canonical	3	250	junction_8	47.3604265183497	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAACGCGTACTAAAATC	-1	True	NA	NA	False	AAGAAA	-2	NA	74592554	74636223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196
transcript_25957.known	chr11	+	2122	12	FSM	ENSG00000077514.9	ENST00000527458.5	2122	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	110.45346052591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGGCACAGGAATTAT	-6	True	NA	NA	False	NA	NA	NA	74592604	74641114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74593038_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74640563
transcript_25958.nic	chr11	+	1223	10	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-27	8381	-1	-6270	5prime_fragment	FALSE	canonical	3	250	junction_8	49.6165543859688	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATTATACTGGGATTC	-1	True	NA	NA	False	NA	NA	NA	74592554	74634695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582
transcript_25961.nic	chr11	+	888	8	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-27	17618	-1	6688	5prime_fragment	FALSE	canonical	3	297	junction_6	36.0187026248241	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGAGCAGCCTACAGTG	-1	True	NA	NA	False	AAGAAA	-4	NA	74592554	74625458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407
transcript_25962.nic	chr11	+	1002	8	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-27	17504	-1	6802	5prime_fragment	FALSE	canonical	3	297	junction_6	36.0187026248241	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGAAAATTTTGTTGCT	-1	True	NA	NA	False	AAAAAG	-37	NA	74592554	74625572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407
transcript_25969.known	chr11	+	854	6	FSM	ENSG00000077514.9	ENST00000530511.5	854	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	158.049359378645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAACGAAAACAGAGGCTA	33	True	NA	NA	False	AAGAAA	-8	NA	74592643	74618770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74592932_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536
transcript_25970.known	chr11	+	2493	2	FSM	ENSG00000254837.2	ENST00000526036.1	2493	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCCTCAAGCTATCTC	-9	True	NA	NA	False	TATAAA	-42	NA	74493365	74498533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74493974_74496648
transcript_25973.nnic	chr11	+	1105	2	NNC	ENSG00000241170.3	novel	648	2	NA	NA	-130625	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19114	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCCAACACCAAGGAAA	NA	False	NA	NA	False	TATAAA	-23	NA	74745660	74920023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_74746275_74919532
transcript_25978.known	chr11	-	399	1	FSM	ENSG00000227615.1	ENST00000428553.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8720	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	8747	False	NA	NA	False	AAGAAA	-4	NA	74746114	74745715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74745700_74746100
transcript_25984.known	chr11	-	1016	9	FSM	ENSG00000166435.16	ENST00000528219.5	1016	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	4.78114787472632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCCATAAAGAGCCCCAA	4	True	NA	NA	False	NA	NA	NA	74949080	74906352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74906457_74907144_74907274_74921213_74921348_74927390_74927489_74930299_74930373_74933800_74933873_74936883_74937069_74945017_74945086_74948927
transcript_25987.nic	chr11	-	1212	5	ISM	ENSG00000166435.16	ENST00000527087.5	2505	15	-60	90293	4	0	5prime_fragment	FALSE	canonical	1	1	junction_3	8.20060973342836	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATTGCCTTATG	NA	False	NA	NA	False	AAAAAG	-5	NA	74949176	74933260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_74933873_74936883_74937069_74940784_74940883_74945017_74945086_74948927
transcript_25988.nic	chr11	-	1114	4	ISM	ENSG00000166435.16	ENST00000524430.1	561	5	-45	1496	4	0	5prime_fragment	FALSE	canonical	3	6	junction_2	7.11805216802087	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATTGCCTTATG	NA	False	NA	NA	False	AAAAAG	-5	NA	74949176	74933260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_74933873_74936883_74937069_74945017_74945086_74948927
transcript_25989.nic	chr11	-	1035	3	ISM	ENSG00000166435.16	ENST00000534798.5	568	5	-74	5870	-3	0	5prime_fragment	FALSE	canonical	1	4	junction_2	9	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATTGCCTTATG	-26	False	NA	NA	False	AAAAAG	-5	NA	74949165	74933260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_74933873_74936883_74937069_74948927
transcript_25991.nic	chr11	-	281	2	ISM	ENSG00000166435.16	ENST00000524430.1	561	5	-45	13289	4	-11793	5prime_fragment	FALSE	canonical	3	8	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTAAGGGGCCATTCC	NA	False	NA	NA	False	AAGAAA	-24	NA	74949176	74945053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_74945086_74948927
transcript_25995.known	chr11	+	839	6	FSM	ENSG00000118363.13	ENST00000532972.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1175.00546381708	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTTGGGGGGTGGGGG	3	True	NA	NA	False	NA	NA	NA	74949264	74977087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74963594_74963688_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_26.known	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00060_+_0_500
transcript_260.known	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_3	3093.43250559418	13471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
transcript_26004.known	chr11	+	321	2	FSM	ENSG00000118363.13	ENST00000527225.1	321	2	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTCTTTCTCCTGGAT	17	True	NA	NA	False	AATAAA	-18	NA	74949278	74977056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74976856
transcript_26006.known	chr11	+	772	4	FSM	ENSG00000118363.13	ENST00000526361.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	1213.77903901639	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATAGCTTTGGGCCAT	2	True	NA	NA	False	NA	NA	NA	74949263	74977348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74965033_74965118_74969639_74969700_74976856
transcript_26007.known	chr11	+	2691	5	FSM	ENSG00000118363.13	ENST00000263672.11	2691	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1183.12686872541	9148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTCACGCCTTTAAT	4	True	NA	NA	False	ATTAAA	-21	NA	74949265	74979033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_26008.known	chr11	+	612	4	FSM	ENSG00000118363.13	ENST00000530257.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	1221.17648192225	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCCTGAAATTTTA	-1	True	NA	NA	False	GATAAA	-43	NA	74949260	74977156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74965033_74965118_74969610_74969700_74976856
transcript_26009.known	chr11	+	265	2	FSM	ENSG00000118363.13	ENST00000527290.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	3067	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGAAATCTTTTCCTT	9	True	NA	NA	False	NA	NA	NA	74949270	74965169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74965033
transcript_2601.known	chr1	-	2254	11	FSM	ENSG00000158062.21	ENST00000314675.11	2254	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	67.3175311490254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGTAAGGAATGTTGCC	0	True	NA	NA	False	GGGGCT	-26	NA	26306636	26281327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26300925_26301025_26301693_26301723_26302812_26302919_26306591
transcript_26010.nic	chr11	+	420	3	NIC	ENSG00000162139.10	novel	431	2	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGAGTGGTTCTTCA	-4	True	NA	NA	False	ATTAAA	-37	NA	74988643	74990163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_74988726_74989017_74989155_74989962
transcript_26012.known	chr11	+	746	2	FSM	ENSG00000162139.10	ENST00000534628.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCCAGAGACCTCCACA	18	True	NA	NA	False	AATAAA	-31	NA	74988943	74995043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74989155_74994508
transcript_26013.known	chr11	+	431	2	FSM	ENSG00000162139.10	ENST00000526068.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGAGTGGTTCTTCA	-1	True	NA	NA	False	ATTAAA	-37	NA	74988924	74990163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74989155_74989962
transcript_26015.known	chr11	+	5929	3	FSM	ENSG00000162139.10	ENST00000294064.9	5929	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	4	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTTTTTTTTCTTA	7	True	NA	17	True	AATAAA	-18	NA	74988932	75010907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74989155_74994508_74994721_75005412
transcript_26016.known	chr11	-	7352	16	FSM	ENSG00000137486.17	ENST00000420843.7	7352	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.2282530689682	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTGTGCTTTCATTT	-1	True	NA	0	True	AATAAA	-35	NA	75351661	75260121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75271700_75271725_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_26019.known	chr11	-	1895	15	FSM	ENSG00000137486.17	ENST00000360025.7	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	7.75024686901083	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTGTGTCTGATAGT	3	True	NA	-86	True	NA	NA	NA	75351705	75265598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_26047.known	chr11	+	2059	7	FSM	ENSG00000149273.15	ENST00000531188.6	2059	7	0	0	0	0	multi-exon	FALSE	canonical	3	9957	junction_6	3438.83307080889	113533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAGGATGTGCCTAGGT	-3	True	NA	11	True	ATTAAA	-23	NA	75399517	75406907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_26048.known	chr11	+	903	6	FSM	ENSG00000149273.15	ENST00000422465.6	903	6	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	7519.55862002551	9240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTAGTTCAGGAT	-1	True	NA	NA	False	NA	NA	NA	75399519	75405884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_26057.known	chr11	+	737	6	FSM	ENSG00000149273.15	ENST00000532872.5	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	7187.88793457438	9098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	9	True	NA	68	True	AATAAA	-20	NA	75399529	75405692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404019_75404208_75404671_75404869_75405613
transcript_26058.known	chr11	+	796	7	FSM	ENSG00000149273.15	ENST00000530721.5	796	7	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_2	7013.14441285473	13037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	-2	True	NA	68	True	AATAAA	-20	NA	75399518	75405692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400778_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_26059.known	chr11	+	1373	5	FSM	ENSG00000149273.15	ENST00000529173.5	1373	5	0	0	0	0	multi-exon	FALSE	canonical	3	17519	junction_1	568.937771201737	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCATAACAGGTATGTC	-6	True	NA	NA	False	NA	NA	NA	75399514	75404855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75402447_75404019_75404208_75404671
transcript_26060.known	chr11	+	771	7	FSM	ENSG00000149273.15	ENST00000526248.5	771	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7257.07685450707	8213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	36	False	NA	68	True	AATAAA	-20	NA	75399556	75405692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404053_75404208_75404671_75404869_75405613
transcript_26061.known	chr11	+	1306	7	FSM	ENSG00000149273.15	ENST00000527446.5	1306	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	7053.32894021602	1750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTCTGTTGTCTATA	10	False	NA	NA	False	NA	NA	NA	75399530	75422280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75421726
transcript_26062.known	chr11	+	564	6	FSM	ENSG00000149273.15	ENST00000534440.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7672.74486999275	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGACACAAGGTCTGAC	10	False	NA	56	True	AATAAA	-8	NA	75399530	75405680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402380_75404671_75404869_75405613
transcript_26063.known	chr11	+	866	6	FSM	ENSG00000149273.15	ENST00000524851.5	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	17519	junction_1	1189.08882763232	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATACAAGTTGAAAC	22	False	NA	NA	False	AATAAA	-24	NA	75399542	75404994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671
transcript_26064.known	chr11	+	473	5	FSM	ENSG00000149273.15	ENST00000528439.5	473	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7510.94109865734	2366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	-3	True	NA	68	True	AATAAA	-20	NA	75399517	75405692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404759_75404869_75405613
transcript_26065.known	chr11	+	710	6	FSM	ENSG00000149273.15	ENST00000526608.5	710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7287.88763360139	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCTGCAAGGGCAGGG	16	False	NA	NA	False	NA	NA	NA	75399536	75404868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401726_75402379_75402447_75404019_75404208_75404671
transcript_26066.known	chr11	-	1500	6	FSM	ENSG00000149243.17	ENST00000376292.8	1500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.74355957741627	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGCTCCCTGTGTTTAC	-8	True	NA	NA	False	NA	NA	NA	75430191	75422393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_75422769_75423691_75423881_75425392_75425582_75426519_75426639_75428441_75428627_75429748
transcript_26071.nic	chr11	-	734	2	ISM	ENSG00000158555.15	ENST00000529721.5	3222	18	-8	55103	-8	-4438	5prime_fragment	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAACCCAGGCAGGCT	-1	True	NA	NA	False	NA	NA	NA	75490759	75489742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_75490321_75490603
transcript_26072.known	chr11	+	2299	6	FSM	ENSG00000149257.16	ENST00000533603.5	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	669.424648485548	12424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	1628	False	NA	26	True	AATAAA	-16	NA	75562055	75572783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75562320_75563726_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_26073.known	chr11	+	2058	5	FSM	ENSG00000149257.16	ENST00000358171.8	2058	5	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_4	80.6392429279938	12522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	4	True	NA	26	True	AATAAA	-16	NA	75562252	75572783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75562320_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_26076.known	chr11	+	651	2	FSM	ENSG00000255326.1	ENST00000527803.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAACACATGGCTGGTG	NA	False	NA	NA	False	NA	NA	NA	75583195	75594665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75583282_75594100
transcript_26077.known	chr11	+	1650	5	FSM	ENSG00000166391.15	ENST00000525093.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAAGGGCAGGGCCAAC	51	False	NA	NA	False	NA	NA	NA	75717888	75731286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75717980_75719991_75720171_75727434_75727640_75727969_75728990_75731131
transcript_26079.known	chr11	+	5117	15	FSM	ENSG00000198382.9	ENST00000356136.8	5117	15	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_7	7.85064666516233	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAGAGTTAAAAGTGTA	-9	True	NA	4	True	AATAAA	-16	NA	75815209	76144232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75815525_75851882_75852001_75861745_75861781_75879878_75880041_75888828_75888904_75911953_75912040_75961443_75961550_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_26080.known	chr11	+	3152	9	FSM	ENSG00000198382.9	ENST00000531818.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	24.6294412238686	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACCTGATTTTTTTTTA	NA	False	NA	4	True	AATAAA	-17	NA	75979525	76142651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75980039_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_26083.known	chr11	-	683	2	FSM	ENSG00000255507.7	ENST00000531263.2	713	2	30	0	-13	0	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTGGCATATAGTAGTT	-12	True	NA	NA	False	ATTAAA	-31	NA	75814797	75813513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_75813862_75814462
transcript_26085.nnic	chr11	-	620	3	NNC	ENSG00000255362.1	novel	388	3	NA	NA	-20849	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTCCCCCTTTGTAACT	NA	False	NA	NA	False	AGTAAA	-16	NA	76236874	76210955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_76211250_76215224_76215293_76236616
transcript_26090.nic	chr11	+	1020	3	NIC	ENSG00000179240.13	novel	8085	3	NA	NA	1	13	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTATTTATTTACTT	-19	True	NA	19	True	TATAAA	-20	NA	76381313	76404113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_76381375_76381788_76382294_76403659
transcript_26092.nnic	chr11	+	1147	3	NNC	ENSG00000179240.13	novel	608	2	NA	NA	-8	3	intron_retention	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGATTTTATGGTAATT	7	True	NA	NA	False	AATAAA	-45	NA	76381339	76395102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_76382294_76394597_76394662_76394973
transcript_26093.nic	chr11	+	534	2	ISM	ENSG00000179240.13	ENST00000531207.5	4228	4	-20	10508	-10	11	5prime_fragment	FALSE	canonical	3	5	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTTTATTTATTTAC	NA	False	NA	17	True	TATAAA	-18	NA	76381292	76404111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_76381375_76403659
transcript_26094.known	chr11	+	5444	2	FSM	ENSG00000179240.13	ENST00000529331.2	5444	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTTACTGGGAG	-10	True	NA	NA	False	ATTAAA	-21	NA	76381322	76408132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76382294_76403659
transcript_26096.known	chr11	+	5363	2	FSM	ENSG00000179240.13	ENST00000321844.6	5363	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTTACTGGGAGAAAA	-8	True	NA	NA	False	ATTAAA	-25	NA	76381324	76408136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76382211_76403659
transcript_26098.known	chr11	+	608	2	FSM	ENSG00000179240.13	ENST00000531785.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGGATTTTATGGTA	410	False	NA	NA	False	AATAAA	-42	NA	76381811	76395099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76382294_76394973
transcript_26099.known	chr11	+	2041	2	FSM	ENSG00000179240.13	ENST00000530460.2	2041	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACATCTCCATTTTGTT	NA	False	NA	6	True	TATAAA	-7	NA	76381304	76404100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76382905_76403659
transcript_261.known	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3382.43472467196	9769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
transcript_26100.known	chr11	+	8085	3	FSM	ENSG00000179240.13	ENST00000607673.2	8085	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTGTGCTGTCTCAAAT	15	True	NA	NA	False	AATAAA	-14	NA	76381347	76392905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76381375_76381788_76382905_76385963
transcript_26106.known	chr11	-	664	2	FSM	ENSG00000255135.5	ENST00000658868.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCCGTCTCAAAA	1	True	NA	NA	False	NA	NA	NA	76444673	76435558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76435827_76444277
transcript_26107.known	chr11	-	599	2	FSM	ENSG00000255135.5	ENST00000530759.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGTTCCCCTTTGCTG	100	False	NA	NA	False	AATAAA	-21	NA	76444574	76441337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76441640_76444277
transcript_26108.known	chr11	-	738	2	FSM	ENSG00000255135.5	ENST00000572035.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTTTTAAAAAAGAAAT	18	True	NA	NA	False	AATAAA	-5	NA	76444656	76441353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76441640_76444204
transcript_26109.known	chr11	+	5508	21	FSM	ENSG00000158636.16	ENST00000334736.7	5508	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	12.2281437675552	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACTGAAGATTTAAACACA	-4	True	NA	2	True	AATAAA	-15	NA	76445024	76551542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76459935_76460086_76463820_76464081_76472563_76472841_76496214_76496470_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76539598_76539641_76542215_76542368_76544258_76544823_76545796_76546298_76549951
transcript_26112.known	chr11	+	934	4	FSM	ENSG00000158636.16	ENST00000533988.5	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2.16024689946929	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTCTGATCATTATAA	-7	True	NA	NA	False	AATAAA	-23	NA	76445021	76453931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313
transcript_26115.known	chr11	+	840	2	FSM	ENSG00000158636.16	ENST00000531998.1	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTTTTGCCATTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	76513396	76516842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76513536_76516141
transcript_26116.known	chr11	+	4015	19	FSM	ENSG00000158636.16	ENST00000524490.5	4015	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	14.5229703114296	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAGAAA	-4	True	NA	NA	False	GATAAA	-25	NA	76445024	76550343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76459932_76460086_76463820_76464081_76472563_76472841_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76542215_76542368_76544258_76544823_76545796_76546298_76549951
transcript_26118.known	chr11	-	2656	4	FSM	ENSG00000137507.11	ENST00000404995.5	2656	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGCTGCCAGCTTC	-2	True	NA	NA	False	ATTAAA	-17	NA	76670747	76657526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76658035_76659582_76661509_76665870_76665959_76670613
transcript_26120.known	chr11	-	573	2	FSM	ENSG00000204529.4	ENST00000526984.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTCCATTCATTTATT	NA	False	NA	NA	False	NA	NA	NA	76704479	76703273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76703528_76704160
transcript_26123.known	chr11	+	2585	2	FSM	ENSG00000182704.8	ENST00000333090.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTACTCAGCCAGT	-1	True	NA	29	True	AATAAA	-15	NA	76783355	76798144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76783405_76795608
transcript_26129.known	chr11	-	296	2	FSM	ENSG00000255100.1	ENST00000526585.1	296	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTATTCCCCCTGCTG	-4	True	NA	NA	False	NA	NA	NA	76783059	76782629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76782857_76782990
transcript_26130.known	chr11	-	293	2	FSM	ENSG00000255100.1	ENST00000527778.1	293	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCAGTTTCAGTCTATT	-5	True	NA	NA	False	NA	NA	NA	76783060	76782639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76782857_76782984
transcript_26131.known	chr11	-	336	2	FSM	ENSG00000255100.1	ENST00000528075.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAAAAAAAGGG	-7	True	NA	NA	False	NA	NA	NA	76783062	76782580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76782857_76783002
transcript_26132.known	chr11	+	4461	12	FSM	ENSG00000078124.13	ENST00000681251.1	4461	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	47.0334855218128	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTAACACAGTGAAACCC	20	True	NA	NA	False	NA	NA	NA	76860939	77023879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76997205_76997274_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_26133.known	chr11	+	7333	11	FSM	ENSG00000078124.13	ENST00000532485.6	7333	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	13.0479883506999	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTAGTGTTTCATCC	-2	True	NA	NA	False	ATTAAA	-26	NA	76860917	77026797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_26136.known	chr11	+	3500	11	FSM	ENSG00000078124.13	ENST00000278544.9	3500	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	46.7765967124587	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTGCTTGCACATCTG	30	False	NA	19	True	AATATA	-15	NA	76860949	77022925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76861080_76926556_76926668_76959076_76959201_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_26140.nic	chr11	+	1093	2	ISM	ENSG00000078124.13	ENST00000525194.5	846	11	-13	147646	5	-111620	5prime_fragment	FALSE	canonical	2	6	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTGGGTTCTGTAAGC	-9	True	NA	5	True	AATAAA	-13	NA	76860910	76869043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_76861080_76868119
transcript_26141.known	chr11	+	4367	13	FSM	ENSG00000149260.18	ENST00000648180.1	4367	13	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	19.6885471502823	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCCTGTGTCCCTCTG	6	True	NA	24	True	AATAAA	-20	NA	77066970	77126155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77067095_77084851_77085052_77093681_77093814_77112588_77112798_77114241_77114435_77115394_77115589_77116225_77116304_77118156_77118353_77119029_77119153_77120712_77120910_77121933_77122050_77122575_77122713_77123687
transcript_26144.known	chr11	-	2543	16	FSM	ENSG00000149269.10	ENST00000278568.8	2543	16	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	225.910503420172	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-2	True	NA	6	True	NA	NA	NA	77474060	77322947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_26148.known	chr11	-	3459	15	FSM	ENSG00000149269.10	ENST00000356341.8	3459	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_14	124.555044794153	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-1	True	NA	-6	True	AATAAA	-18	NA	77474094	77322016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_26162.nic	chr11	-	2054	2	ISM	ENSG00000149269.10	ENST00000278568.8	2543	16	330	67719	5	1664	5prime_fragment	FALSE	canonical	3	240	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCGGGCATGGTGG	-13	True	NA	NA	False	ACTAAA	-13	NA	77473730	77390666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_77392542_77473551
transcript_26164.nic	chr11	-	803	2	ISM	ENSG00000149269.10	ENST00000278568.8	2543	16	-83	69383	-49	0	5prime_fragment	FALSE	canonical	3	240	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTATTTGATTTTCTT	196	False	NA	NA	False	GATAAA	-2	NA	77474143	77392330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_77392542_77473551
transcript_26165.known	chr11	-	450	3	FSM	ENSG00000149269.10	ENST00000528633.1	450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGTATTTGATTTTCTT	8	True	NA	NA	False	GATAAA	-2	NA	77411933	77392330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77392542_77408153_77408233_77411773
transcript_26173.known	chr11	-	1121	6	FSM	ENSG00000074201.9	ENST00000525064.5	1121	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	379.680075853343	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	0	True	NA	-1	True	NA	NA	NA	77637772	77616194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77616696_77619605_77619696_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_26174.known	chr11	-	1172	6	FSM	ENSG00000074201.9	ENST00000263309.7	1172	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	404.055639732946	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	44	False	NA	-1	True	NA	NA	NA	77637751	77616194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77624962_77625071_77629762_77629900_77637589
transcript_26175.known	chr11	-	953	7	FSM	ENSG00000074201.9	ENST00000528364.1	953	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	360.468984642076	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTATGATTTATATTTTC	19	True	NA	NA	False	NA	NA	NA	77637776	77618532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77618688_77619605_77619696_77622499_77622674_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_26176.known	chr11	+	1835	3	FSM	ENSG00000178301.4	ENST00000313578.4	1835	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGAAGGCTTCTTTTA	-3	True	NA	NA	False	TTTAAA	-19	NA	77589952	77610356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77590612_77603555_77603673_77609297
transcript_26187.known	chr11	-	520	2	FSM	ENSG00000048649.14	ENST00000530604.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGAGGTGAAAGTCACC	313	False	NA	NA	False	NA	NA	NA	77820699	77813353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77813702_77820527
transcript_26188.known	chr11	-	11242	16	FSM	ENSG00000048649.14	ENST00000308488.11	11242	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_10	18.0830184304379	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTAGCATGATGTGTTT	6	True	NA	-12	True	AATAAA	-15	NA	77820722	77660008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77667492_77672041_77672231_77675035_77675257_77676791_77677000_77678085_77678154_77683709_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_26189.known	chr11	-	2409	7	FSM	ENSG00000048649.14	ENST00000526324.5	2409	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	17.2787602435926	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGCAAACTTGCTTGA	9552	False	NA	31	True	AAAAAG	-12	NA	77725680	77683768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544
transcript_26190.known	chr11	-	604	4	FSM	ENSG00000048649.14	ENST00000440064.2	604	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	73.3954282560494	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAAGAAACACC	306	False	NA	-38	True	NA	NA	NA	77820706	77725572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77725700_77740730_77740937_77764597_77764690_77820527
transcript_26195.known	chr11	-	3146	23	FSM	ENSG00000149262.17	ENST00000534064.6	3146	23	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_14	17.6581402575518	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	2	True	NA	-1	True	AATAAA	-17	NA	77994668	77878719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_26200.known	chr11	-	1845	12	FSM	ENSG00000149262.17	ENST00000529807.5	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	14.8251517350394	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTATATAGTGTTTT	4	True	NA	NA	False	AATAAA	-17	NA	77994666	77924441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_26206.known	chr11	-	956	3	FSM	ENSG00000149262.17	ENST00000527522.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	79	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTGGTGAAGACTCT	0	True	NA	NA	False	AATAAA	-44	NA	77994670	77987015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77987699_77991107_77991300_77994589
transcript_26207.known	chr11	-	1681	5	FSM	ENSG00000149262.17	ENST00000534408.5	1681	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.6695655851937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAAACAGCTTAAAT	17	True	NA	NA	False	TTTAAA	-16	NA	77994653	77977888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77979101_77981458_77981577_77987603_77987699_77991107_77991300_77994589
transcript_2622.known	chr1	+	467	2	FSM	ENSG00000169442.9	ENST00000374213.3	467	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTCCTGCTTGTGGTT	0	True	NA	19	True	AATAAA	-19	NA	26317957	26320523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26318072_26320170
transcript_26224.known	chr11	+	579	5	FSM	ENSG00000087884.15	ENST00000526415.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	119.981248534927	2243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	-16	True	NA	27	True	AATAAA	-15	NA	77821128	77872352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821242_77841018_77841061_77842478_77842629_77869721_77869818_77872174
transcript_2623.known	chr1	+	751	3	FSM	ENSG00000142669.15	ENST00000270792.10	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	3194	junction_1	30	9396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGGTTGGTTGTGG	3	True	NA	36	True	ATTAAA	-22	NA	26280085	26281522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26280204_26280764_26280933_26281057
transcript_26233.known	chr11	+	421	4	FSM	ENSG00000087884.15	ENST00000525409.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	51.1881062574327	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	42	False	NA	27	True	AATAAA	-15	NA	77821186	77872352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821238_77841018_77841061_77842478_77842629_77872174
transcript_26239.known	chr11	+	531	4	FSM	ENSG00000087884.15	ENST00000393427.7	522	4	0	-9	0	7	multi-exon	FALSE	canonical	3	215	junction_1	70.7876323158847	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACTCACCATTCTCCA	-1	True	NA	36	True	AATAAA	-24	NA	77821143	77872361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77872174
transcript_2624.known	chr1	+	768	2	FSM	ENSG00000142669.15	ENST00000319041.6	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	3194	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAAGGCCCCGCAGTCC	-1	True	NA	-36	True	NA	NA	NA	26280121	26281450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26280204_26280764
transcript_26240.known	chr11	+	726	5	FSM	ENSG00000087884.15	ENST00000526164.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	138.087834366392	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTTATCTGAAAGTC	3	True	NA	NA	False	AATAAA	-34	NA	77821113	77900785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77884779_77884917_77900570
transcript_26241.known	chr11	+	606	5	FSM	ENSG00000087884.15	ENST00000533193.5	606	5	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	151.972653790082	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGACTGTCACTCACCA	NA	False	NA	29	True	AATAAA	-17	NA	77841018	77872354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77841061_77842478_77842629_77855344_77855483_77869721_77869818_77872174
transcript_26245.known	chr11	+	277	2	FSM	ENSG00000254675.1	ENST00000526730.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTGAATCCCGTTATT	NA	False	NA	NA	False	AATAAA	-13	NA	78022932	78023721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_78023022_78023533
transcript_26246.known	chr11	-	422	2	FSM	ENSG00000151366.13	ENST00000534029.5	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCTGACTCTTTATTG	4816	False	NA	-16	True	ATTAAA	-13	NA	78079819	78069855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78070037_78079578
transcript_26247.known	chr11	-	1673	2	FSM	ENSG00000151364.17	ENST00000353172.6	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	624	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCAGTTTTGGTTCTGCT	-27	True	NA	-5	True	AATAAA	-15	NA	78023276	78015714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78017271_78023159
transcript_26248.known	chr11	-	2168	3	FSM	ENSG00000151366.13	ENST00000281031.5	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	3673	junction_1	265	11351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTTGATCTCATCAG	-6	True	NA	1	True	AATAAA	-19	NA	78079862	78068296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78070037_78072997_78073142_78079578
transcript_26252.known	chr11	-	2026	14	FSM	ENSG00000159063.14	ENST00000679444.1	2026	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_13	251.260396764489	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	0	True	NA	-16	True	AATAAA	-14	NA	78139611	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78137241_78137646_78139493
transcript_26253.known	chr11	-	1681	14	FSM	ENSG00000159063.14	ENST00000525761.3	1681	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	245.356087080503	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-19	True	NA	-34	True	AAGAAA	-7	NA	78139630	78100963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709_78138768_78139493
transcript_26260.known	chr11	-	2443	13	FSM	ENSG00000159063.14	ENST00000681575.1	2443	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	196.481692672767	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78139644	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138705
transcript_26263.known	chr11	-	1605	13	FSM	ENSG00000159063.14	ENST00000680761.1	1605	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	193.792343043326	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-8	True	NA	-6	True	AATAAA	-24	NA	78139619	78100935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139528
transcript_26269.known	chr11	-	1398	12	FSM	ENSG00000159063.14	ENST00000530608.6	1398	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	202.852509217579	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	23	True	NA	-16	True	AATAAA	-14	NA	78139588	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124093_78139493
transcript_26270.known	chr11	-	1566	12	FSM	ENSG00000159063.14	ENST00000525783.6	1566	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	200.611091212214	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-13	True	NA	-6	True	AATAAA	-24	NA	78139624	78100935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78139493
transcript_2628.nic	chr1	-	1160	8	ISM	ENSG00000176092.17	ENST00000308182.10	5239	20	17651	0	-96	0	3prime_fragment	FALSE	canonical	3	35	junction_7	33.9987994986138	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	NA	False	NA	-8	True	NA	NA	NA	26336479	26321864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337
transcript_26294.known	chr11	-	2312	14	FSM	ENSG00000159063.14	ENST00000680398.1	2312	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	190.416392064507	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATGCACATATTTTG	NA	False	NA	NA	False	AATAAA	-42	NA	78139648	78097618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78098419_78101092_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26295.known	chr11	-	1355	11	FSM	ENSG00000159063.14	ENST00000679697.1	1355	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	208.699688547923	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-13	True	NA	-16	True	AATAAA	-14	NA	78139624	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26296.known	chr11	-	1677	14	FSM	ENSG00000159063.14	ENST00000376156.7	1677	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	233.976127847195	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGCCAAGCAATTATT	19	True	NA	-17	True	AATAAA	-13	NA	78139592	78100946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26297.known	chr11	-	1471	12	FSM	ENSG00000159063.14	ENST00000529139.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	201.55589016326	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-13	True	NA	-6	True	AATAAA	-24	NA	78139624	78100935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26298.known	chr11	-	1667	14	FSM	ENSG00000159063.14	ENST00000532440.6	1667	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	253.697532250163	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-15	True	NA	-34	True	AAGAAA	-7	NA	78139626	78100963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78107716_78107765_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26299.known	chr11	-	1637	13	FSM	ENSG00000159063.14	ENST00000680866.1	1637	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	191.189460280169	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	NA	False	NA	-16	True	AATAAA	-14	NA	78139660	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26300.known	chr11	-	1636	13	FSM	ENSG00000159063.14	ENST00000680256.1	1636	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	196.481692672767	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-11	True	NA	-16	True	AATAAA	-14	NA	78139622	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127440_78139493
transcript_26301.known	chr11	-	1320	11	FSM	ENSG00000159063.14	ENST00000532306.6	1320	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	216.101457653575	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	23	True	NA	-34	True	AAGAAA	-7	NA	78139588	78100963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26302.known	chr11	-	1202	8	FSM	ENSG00000159063.14	ENST00000530454.6	1202	8	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_4	47.1467530857705	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTAATTTTTGCCTTA	-15	True	NA	NA	False	AATAAA	-17	NA	78139626	78112383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26303.known	chr11	-	1539	13	FSM	ENSG00000159063.14	ENST00000526849.6	1539	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	197.585776028764	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-13	True	NA	-16	True	AATAAA	-14	NA	78139624	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119236_78121146_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26304.known	chr11	-	1515	13	FSM	ENSG00000159063.14	ENST00000680399.1	1515	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	287.500531400475	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGAACTGCTTAG	-13	True	NA	-37	True	AAGAAA	-4	NA	78139624	78100966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106913_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_26305.known	chr11	-	1426	12	FSM	ENSG00000159063.14	ENST00000680459.1	1426	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	203.076258932818	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	2	True	NA	-16	True	AATAAA	-14	NA	78139609	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78127357_78127437_78139493
transcript_26306.known	chr11	-	1709	14	FSM	ENSG00000159063.14	ENST00000681723.1	1709	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	291.222235642377	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-3	True	NA	-16	True	AATAAA	-14	NA	78139614	78100945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78135229_78135348_78139493
transcript_26316.known	chr11	-	3389	2	FSM	ENSG00000188997.8	ENST00000340067.4	3389	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTCTTTTGTGTCTG	-5	True	NA	NA	False	TATAAA	-11	NA	78188626	78171248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78174584_78188572
transcript_26317.known	chr11	+	2125	3	FSM	ENSG00000118369.13	ENST00000530535.5	2125	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGACCTCAGCTCCAAT	20	False	NA	NA	False	NA	NA	NA	78188822	78214138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_78189158_78209447_78210745_78213645
transcript_26327.known	chr11	-	2137	14	FSM	ENSG00000137513.10	ENST00000528850.5	2137	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	184.292185041731	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTACTTCATTAAACATT	1289	False	NA	27	True	GATAAA	-15	NA	78573530	78436222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78573133
transcript_26328.known	chr11	-	2512	14	FSM	ENSG00000137513.10	ENST00000281038.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_13	60.159256101406	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-45	True	NA	NA	False	AATAAA	-21	NA	78574864	78435967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
transcript_26329.nic	chr11	-	2057	14	NIC	ENSG00000137513.10	novel	2512	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_13	153.732457988069	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	NA	False	NA	NA	False	AATAAA	-21	NA	78574890	78435967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_2633.nnic	chr1	-	1051	7	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	-100	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_6	23.8146780135464	473	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	NA	False	NA	-8	True	NA	NA	NA	26336483	26321864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336337
transcript_26335.nic	chr11	-	1802	14	NIC	ENSG00000137513.10	novel	2137	14	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_13	153.732457988069	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTACTTCATTAAACATT	NA	False	NA	27	True	GATAAA	-15	NA	78574890	78436222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574828
transcript_26370.known	chr11	-	2120	10	FSM	ENSG00000137509.12	ENST00000393399.6	2120	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	151.996913548911	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTGTGTGTTGCTTCTG	-2	True	NA	-9	True	AATAAA	-18	NA	82900430	82824367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82884822_82884886_82900234
transcript_26371.known	chr11	-	3333	9	FSM	ENSG00000137509.12	ENST00000680566.1	3333	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	121.433559508894	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	NA	False	NA	-115	True	AATATA	-37	NA	82901740	82823043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901592
transcript_26374.known	chr11	-	814	2	FSM	ENSG00000137509.12	ENST00000680341.1	814	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTCAAGAAATATGGGAC	-3	True	NA	NA	False	AGTAAA	-15	NA	82900431	82879220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82879838_82900234
transcript_26375.known	chr11	-	3489	9	FSM	ENSG00000137509.12	ENST00000313010.8	3489	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	19.4899814007094	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAGACTTGAGTGCT	-2	True	NA	-7	True	AATAAA	-30	NA	82900430	82822935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_26376.known	chr11	-	1420	8	FSM	ENSG00000137509.12	ENST00000531283.2	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	17.2626765016321	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATGTTTTCCTATGCCT	-2	True	NA	NA	False	AATATA	-27	NA	82900430	82838268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_26378.known	chr11	+	3524	6	FSM	ENSG00000165490.13	ENST00000533655.6	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	14.4692777981487	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTTTTTAATTGTT	-8	True	NA	19	True	AATAAA	-18	NA	82901735	82934659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82928776_82928939_82930156_82930275_82931731
transcript_26379.known	chr11	+	961	5	FSM	ENSG00000165490.13	ENST00000525388.5	961	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	81.2723046307904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTCATGGAGCCTTGTTT	-2	True	NA	NA	False	NA	NA	NA	82901741	82932216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_82901823_82913282_82913387_82914722_82914852_82928776_82928939_82931731
transcript_26382.known	chr11	-	9859	5	FSM	ENSG00000137502.10	ENST00000527633.6	9859	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	4.15331193145904	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGAATCATATGCCAT	22	False	83071919	NA	False	AATAAA	-19	NA	83071897	82973132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82982416_82987586_82987771_82994038_82994123_82997223_82997325_83071690
transcript_26386.known	chr11	-	3746	5	FSM	ENSG00000137502.10	ENST00000534141.5	3746	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.9687092035858	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCAGTTTCCAGTGA	-4	True	NA	-4	True	AATAAA	-22	NA	83071923	82979267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82982416_82987590_82987771_82994038_82994123_82997223_82997325_83071690
transcript_2639.nnic	chr1	-	906	6	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	-96	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	54.0607066176535	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	NA	False	NA	-8	True	NA	NA	NA	26336479	26321864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328733_26328874_26336094_26336208_26336337
transcript_26396.known	chr11	+	2467	3	FSM	ENSG00000246067.9	ENST00000656330.1	2467	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	11	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCCGGGCAATAACAGCA	NA	False	NA	NA	False	NA	NA	NA	83072051	83075492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072147_83072622_83072805_83073302
transcript_26399.known	chr11	+	597	2	FSM	ENSG00000246067.9	ENST00000534499.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAACCAAAGTTAATT	37	False	NA	NA	False	GATAAA	-19	NA	83072121	83073194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072147_83072622
transcript_26404.known	chr11	+	1487	1	FSM	ENSG00000246067.9	ENST00000663168.1	1487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTTCAAAAAATGATC	18	True	NA	-10	True	NA	NA	NA	83072102	83073589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072100_83073600
transcript_26405.known	chr11	+	563	3	FSM	ENSG00000246067.9	ENST00000501011.8	572	3	6	3	0	0	multi-exon	FALSE	canonical	3	38	junction_1	55	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGTGTCATGTTT	18	True	NA	5	True	NA	NA	NA	83072102	83073604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072182_83072622_83072805_83073302
transcript_26406.known	chr11	+	825	2	FSM	ENSG00000246067.9	ENST00000533708.1	825	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTTCCCTTTTGCAT	33	False	NA	18	True	NA	NA	NA	83072117	83073383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072182_83072622
transcript_26409.known	chr11	+	2514	12	FSM	ENSG00000137494.14	ENST00000260047.10	2514	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.4659615383871	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGACTCAGTTGTGCACC	54	False	NA	7	True	ATTAAA	-25	NA	83193875	83256099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210417_83211294_83211431_83224854_83225056_83227746_83227873_83236403_83236510_83240758_83240935_83245497_83245625_83247942_83248088_83255844
transcript_26417.known	chr11	-	1986	9	FSM	ENSG00000137500.10	ENST00000529611.5	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	291.294953612314	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGTTGTGTGGGTTTT	1	True	NA	-27	True	TATAAA	-16	NA	83285998	83261461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126
transcript_26418.known	chr11	-	1550	9	FSM	ENSG00000137500.10	ENST00000455220.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	322.40151112394	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGTGGATCACTTGAGG	-5	True	NA	42	True	NA	NA	NA	83286390	83261316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83286099
transcript_26421.known	chr11	-	773	9	FSM	ENSG00000137500.10	ENST00000529312.5	773	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	431.642339645916	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGGCTTCTTAGAA	4	True	NA	-154	True	NA	NA	NA	83285979	83261890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285126_83285212_83285872
transcript_26440.known	chr11	-	1039	7	FSM	ENSG00000137500.10	ENST00000529856.5	1039	7	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	372.831396210137	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACGGACTAAAAGAGGAA	-5	True	NA	-59	True	NA	NA	NA	83286355	83261795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83285872
transcript_26448.known	chr11	+	4066	6	FSM	ENSG00000137494.14	ENST00000393389.7	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	15.8113883008419	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTGATACATTGTTTT	-9	True	NA	6	True	AATAAA	-17	NA	83193738	83215200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210420_83211294_83211431_83212652
transcript_2645.known	chr1	+	3458	5	FSM	ENSG00000131914.11	ENST00000254231.4	3458	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1155.30104301866	3532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCATCCCCTTGTCA	0	True	NA	28	True	AATAAA	-20	NA	26410816	26429719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428588_26429095
transcript_26463.known	chr11	-	429	4	FSM	ENSG00000247137.9	ENST00000529811.5	429	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATAATGGTAAAGGTTT	984	False	NA	-35	True	AATATA	-18	NA	83193620	83191064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83191169_83192427_83192542_83192735_83192793_83193466
transcript_26468.known	chr11	+	1720	1	FSM	ENSG00000165494.12	ENST00000624931.1	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	1	True	NA	14	True	AATAAA	-15	NA	83157159	83158879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83157200_83158900
transcript_26469.known	chr11	-	734	4	FSM	ENSG00000247137.9	ENST00000602381.2	734	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.32049379893857	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACTCAGCAGTGAGTT	7	True	NA	NA	False	AATAAA	-20	NA	83193642	83184490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83184854_83191054_83191169_83192735_83192817_83193466
transcript_2647.known	chr1	+	3975	4	FSM	ENSG00000131914.11	ENST00000326279.11	3975	4	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	111.804392678563	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCAGATGTTTTT	0	True	NA	37	True	AATAAA	-29	NA	26410816	26429728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241
transcript_26470.known	chr11	-	435	4	FSM	ENSG00000247137.9	ENST00000529031.5	435	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	4.24264068711928	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATGGTAAAGGTTTTA	1004	False	NA	-33	True	AATATA	-20	NA	83193600	83191062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83191169_83192427_83192542_83192735_83192817_83193466
transcript_26471.known	chr11	-	452	4	FSM	ENSG00000247137.9	ENST00000529607.1	452	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACTAATATACTTATAAAA	1035	False	NA	NA	False	AATAAA	-6	NA	83193569	83192019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83192198_83192427_83192542_83192735_83192793_83193466
transcript_26472.known	chr11	-	4014	9	FSM	ENSG00000137500.10	ENST00000529689.6	3990	9	-40	16	-17	-16	multi-exon	FALSE	canonical	3	629	junction_8	147.343932263938	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGTTGACCTTAATCCA	NA	False	NA	NA	False	AATAAA	-14	NA	83286407	83259096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285872
transcript_26473.known	chr11	-	1919	9	FSM	ENSG00000137500.10	ENST00000525503.5	1919	9	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_8	227.739674573843	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-1	True	NA	-21	True	TATAAA	-22	NA	83286351	83261455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285552
transcript_26474.known	chr11	-	777	9	FSM	ENSG00000137500.10	ENST00000527025.5	777	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	391.987543647754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTAACAAACTTGAGACAA	-7	True	NA	NA	False	AATAAA	-39	NA	83285990	83265899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126_83285212_83285872
transcript_26487.known	chr11	-	566	5	FSM	ENSG00000150672.18	ENST00000530800.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.97390157267426	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAATTTGGGGGCAGTT	473	False	NA	NA	False	NA	NA	NA	83724956	83486154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83486252_83532707_83532784_83541681_83541859_83633210_83633326_83724855
transcript_2649.nnic	chr1	-	2482	2	Antisense	novelGene_ENSG00000131914.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3274	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCCCCAGAACCCTCAC	NA	False	NA	NA	False	NA	NA	NA	26429722	26426682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_26428575_26429132
transcript_26498.nnic	chr11	+	1466	3	Antisense	novelGene_ENSG00000150672.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAACTTACTATAATTCA	NA	False	NA	NA	False	AATAAA	-18	NA	83434377	83572181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_83434933_83565647_83565787_83571409
transcript_26505.nnic	chr11	+	1575	2	Antisense	novelGene_ENSG00000150672.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTCTTGAACCAGGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	85606594	85614300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_85607095_85613225
transcript_2651.known	chr1	+	3338	9	FSM	ENSG00000117682.17	ENST00000434391.6	3338	9	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	68.9814286601836	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	4207	False	NA	9	True	AATAGA	-15	NA	26432281	26471294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442707_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_26527.known	chr11	+	1149	6	FSM	ENSG00000171204.13	ENST00000529197.1	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	184.574537788938	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	9	True	NA	20	True	AATAAA	-34	NA	85628604	85636510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_26532.known	chr11	+	675	6	FSM	ENSG00000171204.13	ENST00000530783.5	675	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	320.573610891477	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCCTCTAGTCTTTCAG	1	True	NA	NA	False	AATGAA	-9	NA	85628596	85636128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85629131_85629204_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_26535.known	chr11	+	820	6	FSM	ENSG00000171204.13	ENST00000531477.5	820	6	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	314.298329616942	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATACATGAAGAGTAAC	-3	True	NA	NA	False	ATTAAA	-43	NA	85628592	85636210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85629131_85629263_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_26549.known	chr11	+	1388	4	FSM	ENSG00000171204.13	ENST00000528361.5	1388	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	156.768052300914	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCCAGGTCTGGTTTG	1	True	NA	0	True	AATAAA	-13	NA	85628596	85635087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085
transcript_26552.known	chr11	+	376	4	FSM	ENSG00000171204.13	ENST00000531274.1	376	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	307.28958473871	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAAATGGTCTATACC	34	False	NA	NA	False	AATGAA	-40	NA	85628629	85636159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85634085_85634177_85635666_85635779_85636045
transcript_26554.known	chr11	+	853	4	FSM	ENSG00000171204.13	ENST00000526822.5	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	303.611959945952	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATCTTTCCTCTTTGT	8	True	NA	17	True	AATAAA	-31	NA	85628603	85636507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85634085_85634280_85635666_85635779_85636045
transcript_2656.known	chr1	+	3245	9	FSM	ENSG00000117682.17	ENST00000360009.6	3245	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_8	59.4637494613315	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	27	True	NA	9	True	AATAGA	-15	NA	26432354	26471294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
transcript_26560.known	chr11	+	1015	5	FSM	ENSG00000171204.13	ENST00000358867.11	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	135.511069658534	3521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	-3	True	NA	46	True	AATAAA	-43	NA	85628592	85636536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_26561.known	chr11	+	1273	4	FSM	ENSG00000171204.13	ENST00000534341.1	1273	4	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	143.810832538984	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	6	True	NA	46	True	AATAAA	-43	NA	85628601	85636536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666
transcript_26569.known	chr11	+	722	5	FSM	ENSG00000171202.7	ENST00000531366.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	111.600571235097	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAATGTTATGTCTAAT	10	True	NA	22	True	AATAAA	-18	NA	85647986	85656547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85648090_85650248_85650342_85654062_85654235_85655593_85655709_85656308
transcript_26570.known	chr11	+	759	5	FSM	ENSG00000171202.7	ENST00000304511.7	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_2	19.0180834996589	3955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	-10	True	NA	17	True	AATAAA	-13	NA	85647966	85656542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85648090_85650248_85650342_85654062_85654257_85655593_85655709_85656308
transcript_26578.known	chr11	+	643	5	FSM	ENSG00000171202.7	ENST00000532180.1	643	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.449356266718	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTAATGTTATGTC	-3	True	NA	18	True	AATAAA	-14	NA	85648020	85656543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85648090_85650311_85650342_85654062_85654257_85655593_85655709_85656308
transcript_2658.known	chr1	+	3288	9	FSM	ENSG00000117682.17	ENST00000236342.12	3288	9	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	39.578245287026	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGCTAACTGCAACG	-7	True	NA	21	True	AATAGA	-27	NA	26432320	26471306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_26583.known	chr11	+	656	4	FSM	ENSG00000171202.7	ENST00000528105.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	119.978701813651	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	0	True	NA	17	True	AATAAA	-13	NA	85647976	85656542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85648090_85654062_85654257_85655593_85655709_85656308
transcript_26587.known	chr11	-	898	5	FSM	ENSG00000137504.15	ENST00000527529.6	898	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	152.076255543066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	918	False	NA	NA	False	AATAGA	-44	NA	85664189	85660334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85660598_85661636_85661750_85662388_85662458_85663523_85663602_85663814
transcript_26588.known	chr11	-	4368	5	FSM	ENSG00000137504.15	ENST00000682836.1	4368	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	113.488710892317	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTGTTGAAAGAACAAAT	43	False	NA	NA	False	AATATA	-8	NA	85665064	85657741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85660598_85662388_85662458_85663178_85663294_85663523_85663602_85663814
transcript_26590.known	chr11	-	2850	4	FSM	ENSG00000137504.15	ENST00000525639.1	2850	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	136.746318252286	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	5	True	NA	NA	False	AATAGA	-44	NA	85665102	85660334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85661750_85662388_85662458_85663523_85663602_85663814
transcript_26592.known	chr11	-	1431	4	FSM	ENSG00000137504.15	ENST00000260058.9	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	96.2219656142331	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTATTTATTTCCTGG	454	False	NA	NA	False	NA	NA	NA	85664653	85660152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85660598_85662388_85662458_85663523_85663602_85663814
transcript_26594.nic	chr11	-	2215	4	ISM	ENSG00000137504.15	ENST00000682836.1	4368	5	-65	4009	0	202	5prime_fragment	FALSE	canonical	3	40	junction_2	130.830679378602	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	-22	True	NA	0	True	AATAAA	-22	NA	85665129	85661750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_85662458_85663178_85663294_85663523_85663602_85663814
transcript_26595.known	chr11	-	745	3	FSM	ENSG00000137504.15	ENST00000528889.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	158	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGGAAAGATTATTTG	1248	False	NA	NA	False	TATAAA	-7	NA	85663859	85661952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85662458_85663523_85663602_85663697
transcript_26596.nic	chr11	-	2785	3	ISM	ENSG00000137504.15	ENST00000260058.9	1431	4	-476	913	0	-731	5prime_fragment	FALSE	canonical	3	320	junction_2	4	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTCTTACTATTTTTA	-22	True	NA	0	True	ATTAAA	-22	NA	85665129	85661065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_26597.nic	chr11	-	2100	3	ISM	ENSG00000137504.15	ENST00000525639.1	2850	4	-27	1416	0	202	5prime_fragment	FALSE	canonical	3	320	junction_2	4	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	-22	True	NA	0	True	AATAAA	-22	NA	85665129	85661750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_26598.known	chr11	-	7140	1	FSM	ENSG00000137504.15	ENST00000527447.2	7140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATATATATTTTTCTGT	-22	True	NA	-4	True	AATAAA	-26	NA	85665129	85657989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85658000_85665100
transcript_26599.known	chr11	-	4329	2	FSM	ENSG00000137504.15	ENST00000490820.2	4329	2	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGATTGTTTTATTTCA	5	True	NA	-5	True	AAAACA	-8	NA	85665102	85659707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85662458_85663523
transcript_26600.known	chr11	-	1910	12	FSM	ENSG00000137501.18	ENST00000529581.5	1910	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	4.43315830554059	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATGGACCTTA	0	True	NA	NA	False	NA	NA	NA	85719138	85694725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85695341_85696182_85696389_85697978_85698079_85700514_85700594_85704857_85705029_85707428_85707532_85709330_85709501_85711112_85711233_85714412_85714508_85717482_85717531_85718789_85718844_85718989
transcript_26604.nic	chr11	-	3652	21	NIC	ENSG00000073921.18	novel	3474	20	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	39.238851920004	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-6	True	NA	-21	True	AATAAA	-18	NA	86069087	85957683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_26606.known	chr11	-	3474	20	FSM	ENSG00000073921.18	ENST00000532317.5	3474	20	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	25.0165596125376	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	22	True	NA	-21	True	AATAAA	-18	NA	86069059	85957683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_26607.known	chr11	-	4134	20	FSM	ENSG00000073921.18	ENST00000393346.8	4134	20	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_3	44.7789894340732	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAGTTGTACTTTTAT	-3	True	NA	27	True	ATTAAA	-16	NA	86069084	85957174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_26609.known	chr11	-	1958	19	FSM	ENSG00000073921.18	ENST00000356360.9	1958	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	49.0906191536518	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTCCAGCAAAATCCAAAC	0	True	NA	NA	False	AAAAAG	-27	NA	86068780	85958986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85959061_85974707_85974813_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_26617.nnic	chr11	-	517	2	NNC	ENSG00000073921.18	novel	4134	20	NA	NA	30	-20013	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAAGTGATGAGTTTT	841	False	NA	NA	False	AATAAA	-13	NA	86069029	86042390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_86042529_86068650
transcript_26623.known	chr11	+	1696	13	FSM	ENSG00000074266.22	ENST00000351625.10	1696	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	132.10756875449	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTTTTTGTAGTTCT	7	True	NA	89	True	AATAAA	-23	NA	86245222	86278813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86270082_86270158_86276979_86277139_86277917_86277992_86278398
transcript_26624.known	chr11	+	1235	2	FSM	ENSG00000074266.22	ENST00000528250.1	1235	2	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGTTTAGTTACTTT	NA	False	NA	15	True	AATAAA	-17	NA	86277097	86278739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86277992_86278398
transcript_26651.known	chr11	+	715	4	FSM	ENSG00000149196.17	ENST00000531485.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	398.420213677302	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACATTGAAAAATGAAAA	7	True	NA	NA	False	ATTAAA	-19	NA	86302242	86345791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86302479_86337378_86337531_86344602_86344722_86345583
transcript_26656.known	chr11	+	1108	5	FSM	ENSG00000149196.17	ENST00000278483.8	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_4	153.389007102856	6462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCATGTGTAATCATT	4	True	NA	29	True	AATAAA	-30	NA	86302239	86345943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602_86344722_86345583
transcript_26657.known	chr11	+	1694	4	FSM	ENSG00000149196.17	ENST00000533986.5	1694	4	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_2	60.4041941148681	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAAATAATTTTTA	NA	False	NA	-13	True	AAAACA	-4	NA	86302210	86345638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602
transcript_26658.known	chr11	+	499	5	NNC	ENSG00000149196.17	novel	1108	5	NA	NA	2977	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	412.172521524664	300	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAATTTGTCATGTT	2979	False	NA	11	True	AATAAA	-15	NA	86306332	86345662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_86306415_86306415_86306483_86337378_86337531_86344602_86344722_86345583
transcript_26659.known	chr11	+	2627	15	FSM	ENSG00000149201.10	ENST00000445632.7	2627	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	7.13571071070981	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGTGCATGACAATTCA	0	True	NA	16	True	AATAAA	-16	NA	86374886	86423106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86375243_86386050_86386113_86387515_86387673_86392540_86392798_86395333_86395414_86397620_86397743_86400677_86400802_86407613_86407702_86408126_86408271_86409260_86409366_86412386_86412560_86414788_86414868_86415092_86415314_86419927_86420054_86422573
transcript_26674.known	chr11	+	1226	3	FSM	ENSG00000246523.9	ENST00000499504.8	1226	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCCAAATTTCTATA	NA	False	NA	NA	False	AATATA	-43	NA	86955615	87000959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86955713_86957981_86958027_86999875
transcript_26676.known	chr11	+	1299	3	FSM	ENSG00000246523.9	ENST00000531827.3	1313	3	14	0	10	0	multi-exon	FALSE	canonical	2	5	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCCAAATTTCTATA	-1	True	NA	NA	False	AATATA	-43	NA	86956090	87000959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86956261_86957981_86958027_86999875
transcript_26679.known	chr11	+	8980	15	FSM	ENSG00000166575.17	ENST00000305494.6	8980	15	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	21.2396433345664	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGTAGATCTCCTTT	-1	True	NA	11	True	AATAAA	-19	NA	87037933	87328824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340_87157407_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_26683.known	chr11	+	3938	14	FSM	ENSG00000166575.17	ENST00000340353.11	3938	14	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_4	58.4516185915868	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTCTCAAATCTATT	-20	True	NA	46	True	AGTAAA	-20	NA	87037843	87323758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_26698.known	chr11	+	1095	5	FSM	ENSG00000166575.17	ENST00000529023.5	1095	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_2	19.9546360528074	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCCTGTCAATCCTTT	28	True	NA	NA	False	AAAAAG	-45	NA	87037891	87157885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340
transcript_26705.nnic	chr11	-	1674	3	NNC	ENSG00000285835.1	novel	837	4	NA	NA	-537	-106600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACTAAAACACAGATTC	NA	False	NA	NA	False	AGTAAA	-14	NA	88046145	87953858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_87954907_87964652_87964710_88045576
transcript_26707.nnic	chr11	-	1256	3	NNC	ENSG00000285835.1	novel	837	4	NA	NA	-266	-106597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAACACAGATTCCAT	NA	False	NA	NA	False	AGTAAA	-17	NA	88045874	87953855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_87954907_88045576_88045692_88045784
transcript_26709.nic	chr11	-	1648	2	ISM	ENSG00000285835.1	ENST00000649399.1	837	4	-565	106597	-565	-106597	5prime_fragment	FALSE	canonical	1	4	junction_1	0	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAACACAGATTCCAT	NA	False	NA	NA	False	AGTAAA	-17	NA	88046173	87953855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_87954907_88045576
transcript_26711.nnic	chr11	-	2168	8	Fusion	ENSG00000109861.17_ENSG00000123892.12	novel	1524	6	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_2	696.581331231614	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	-12	True	NA	-13	True	AATAAA	-25	NA	88337780	88113250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_88114141_88149674_88149956_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_26712.nnic	chr11	-	2036	7	Fusion	ENSG00000109861.17_ENSG00000123892.12	novel	1432	3	NA	NA	0	0	multi-exon	FALSE	canonical	3	20	junction_2	737.312386682575	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	-12	True	NA	-13	True	AATAAA	-25	NA	88337780	88113250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_88114141_88149674_88149956_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_26718.known	chr11	-	1432	3	FSM	ENSG00000123892.12	ENST00000243662.11	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	17	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	29	True	NA	-13	True	AATAAA	-25	NA	88175443	88113250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88114141_88149674_88149956_88175182
transcript_26720.known	chr11	-	1007	3	FSM	ENSG00000123892.12	ENST00000526372.1	1007	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	48.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTTTTCCAGATTT	38	True	NA	NA	False	NA	NA	NA	88175434	88113611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88114141_88149674_88149956_88175237
transcript_26721.known	chr11	-	928	2	FSM	ENSG00000123892.12	ENST00000531138.1	928	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATATTGTCCTTGTCCT	39	True	NA	NA	False	NA	NA	NA	88175433	88113463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88114141_88175182
transcript_26723.known	chr11	-	1828	7	FSM	ENSG00000109861.17	ENST00000676612.1	1828	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	565.648718041703	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-2	True	NA	-6	True	AATAAA	-19	NA	88337740	88293591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337546
transcript_26725.known	chr11	-	2774	7	FSM	ENSG00000109861.17	ENST00000679224.1	2774	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	564.918504447028	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAAGTTTTTTTTCACTA	392	False	NA	NA	False	TATAAA	-18	NA	88337749	88292493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337707
transcript_2673.known	chr1	+	1235	8	FSM	ENSG00000117682.17	ENST00000525682.6	1235	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	69.9994169071924	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGTTTGGAGAGCAAAG	11	True	NA	2	True	ACTAAA	-18	NA	26432338	26469373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26457790_26457906_26460036_26460145_26468894
transcript_26735.known	chr11	-	764	4	FSM	ENSG00000109861.17	ENST00000677796.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	28.0158685192676	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	418	False	NA	-23	True	AATAAA	-16	NA	88337723	88326087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337546
transcript_26736.known	chr11	-	669	4	FSM	ENSG00000109861.17	ENST00000528020.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	27.2763633939717	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGTGTATGTTTTGTT	418	False	NA	43	True	NA	NA	NA	88337723	88326021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337707
transcript_26738.known	chr11	-	677	3	FSM	ENSG00000109861.17	ENST00000677468.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	2	True	NA	-23	True	AATAAA	-16	NA	88337736	88326087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88328111_88328197_88337500
transcript_26741.known	chr11	-	1870	7	FSM	ENSG00000109861.17	ENST00000227266.10	1870	7	0	0	0	0	multi-exon	FALSE	canonical	3	1401	junction_2	190.859168556877	7719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	2	True	NA	-6	True	AATAAA	-19	NA	88337736	88293591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_26742.known	chr11	-	6119	6	FSM	ENSG00000109861.17	ENST00000533897.2	6119	6	0	0	0	0	multi-exon	FALSE	canonical	3	1412	junction_2	190.097238275573	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	421	False	NA	-6	True	AATAAA	-19	NA	88337720	88293591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_26743.known	chr11	-	1867	7	FSM	ENSG00000109861.17	ENST00000678506.1	1867	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	625.0039999872	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-4	True	NA	-6	True	AATAAA	-19	NA	88337772	88293591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312426_88312555_88334936_88335083_88337500
transcript_26744.known	chr11	-	1957	8	FSM	ENSG00000109861.17	ENST00000677802.1	1957	8	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_5	710.138905641792	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	0	True	NA	-6	True	AATAAA	-19	NA	88337738	88293591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88328111_88328197_88334936_88335083_88337500
transcript_26745.known	chr11	-	1604	3	FSM	ENSG00000109861.17	ENST00000679199.1	1604	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	961	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCAGACTGCTTCCTC	2	True	NA	NA	False	TATAAA	-24	NA	88337736	88315252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88316475_88334936_88335083_88337500
transcript_26746.known	chr11	-	724	3	FSM	ENSG00000109861.17	ENST00000677976.1	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	903.5	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	419	False	NA	-23	True	AATAAA	-16	NA	88337722	88326087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88334936_88335083_88337500
transcript_26747.known	chr11	-	900	5	FSM	ENSG00000109861.17	ENST00000393301.5	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	807.838280536395	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	416	False	NA	-23	True	AATAAA	-16	NA	88337725	88326087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88327928_88328017_88328111_88328197_88334936_88335083_88337500
transcript_26748.known	chr11	-	778	4	FSM	ENSG00000109861.17	ENST00000529974.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	880.852238838425	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	5	True	NA	-21	True	AATAAA	-18	NA	88337733	88326085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326400_88328111_88328197_88334936_88335083_88337500
transcript_26749.known	chr11	-	672	3	FSM	ENSG00000109861.17	ENST00000534131.2	672	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	960	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCAGCATCCTCCAGG	415	False	NA	NA	False	AATAAA	-18	NA	88337726	88330345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88330646_88334936_88335083_88337500
transcript_26750.known	chr11	-	1662	6	FSM	ENSG00000109861.17	ENST00000677208.1	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	675.283229467458	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	1	True	NA	-6	True	AATAAA	-19	NA	88337695	88293591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88334936_88335083_88337500
transcript_26751.known	chr11	-	1802	7	FSM	ENSG00000109861.17	ENST00000678395.1	1802	7	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_4	614.672654526149	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	8	True	NA	-6	True	AATAAA	-19	NA	88337730	88293591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312449_88312555_88334936_88335083_88337500
transcript_26753.nnic	chr11	+	686	4	FSM	ENSG00000288018.2	ENST00000689290.1	695	4	-8	17	-8	0	multi-exon	FALSE	canonical	0	0	junction_3	3.85861230093008	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAATGTAATTTCTTTT	NA	False	NA	NA	False	TTTAAA	-15	NA	88337842	88428176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_88338057_88373236_88373328_88423486_88423598_88427906
transcript_26760.known	chr11	-	560	3	FSM	ENSG00000086991.13	ENST00000393282.2	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAACAAATAAATAATT	621	False	NA	NA	False	AATATA	-7	NA	89491565	89488905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_89488994_89490457_89490554_89491189
transcript_26761.known	chr11	+	1974	14	FSM	ENSG00000134612.12	ENST00000525540.1	1974	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.08240363688233	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATGTGAGTGTTTATATA	NA	False	NA	NA	False	AATAAA	-18	NA	89659296	89698718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_89659725_89662149_89662244_89669404_89669504_89670389_89670476_89671886_89672007_89674086_89674170_89676104_89676169_89680608_89680677_89687346_89687439_89688583_89688675_89690881_89691147_89691446_89691529_89696632_89696726_89698409
transcript_26762.known	chr11	+	3466	19	FSM	ENSG00000077616.11	ENST00000534061.6	3466	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.51539822656808	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAACGAGTTAAGAATTA	-10	True	NA	NA	False	AATAAA	-22	NA	90134662	90192894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90159238_90159338_90162948_90163035_90163309_90163430_90163534_90163618_90168928_90168993_90170068_90170137_90173823_90173916_90175971_90176063_90177852_90178118_90181619_90181702_90182915_90183009_90191557
transcript_26765.nic	chr11	+	1975	11	ISM	ENSG00000077616.11	ENST00000534061.6	3466	19	-17	28693	-17	0	5prime_fragment	FALSE	canonical	3	12	junction_3	3.23264597504892	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTGGGGTTTTTTTTCTT	-27	True	NA	NA	False	AATAAA	-22	NA	90134645	90164201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90158239_90159238_90159338_90162948_90163035_90163309_90163430_90163534
transcript_26767.known	chr11	+	2922	10	FSM	ENSG00000077616.11	ENST00000524501.1	2922	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.16441400296898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGTGGGGTTTTTTTTCTT	22	True	NA	NA	False	AATAAA	-22	NA	90134694	90164201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_90134837_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144_90159338_90162948_90163035_90163309_90163430_90163534
transcript_26769.known	chr11	+	1504	7	FSM	ENSG00000077616.11	ENST00000529090.5	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	3.8151743807532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATAACTGATATTTCTT	-9	True	NA	NA	False	AGTAAA	-16	NA	90134663	90158757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144
transcript_2677.known	chr1	+	868	7	FSM	ENSG00000117682.17	ENST00000427245.6	868	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	83.8121245538032	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTCCCTCTCATGTT	-12	True	NA	NA	False	ATTAAA	-29	NA	26432315	26448565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26448355
transcript_26770.known	chr11	-	3070	11	FSM	ENSG00000110172.12	ENST00000320585.11	3070	11	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_10	65.7096644337802	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGTCTTTTTTAGC	-3	True	NA	0	True	AATAAA	-30	NA	90223049	90200428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_26771.known	chr11	-	1136	12	FSM	ENSG00000110172.12	ENST00000525317.5	1136	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	182.457467023762	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGGAGATGGAAGGAAG	269	False	NA	37	True	AAAAAG	-32	NA	90223030	90202406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747_90206811_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_26772.known	chr11	+	1613	1	FSM	ENSG00000214391.3	ENST00000530835.1	1613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	650	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTTATGTTATATT	NA	False	NA	NA	False	CATAAA	-2	NA	90282559	90284172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_90282600_90284200
transcript_26775.known	chr11	-	6037	11	FSM	ENSG00000180773.15	ENST00000326402.9	6037	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	29.6359578890239	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCTTTTAGATAACATT	-22	True	NA	-5	True	AATAAA	-15	NA	93197991	93144173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93148845_93154107_93154278_93162705_93162876_93165917_93166017_93167943_93168172_93180796_93180882_93181690_93181787_93182805_93182895_93184429_93184521_93185690_93185815_93197777
transcript_26792.known	chr11	-	374	3	FSM	ENSG00000166002.7	ENST00000526869.1	374	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	6	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACGTGGCCACGCG	7	True	NA	NA	False	NA	NA	NA	93543355	93479048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93479270_93499275_93499349_93543275
transcript_26793.known	chr11	-	889	2	FSM	ENSG00000166002.7	ENST00000525141.1	889	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATGCTTATCATGTTTT	NA	False	NA	-11	True	AATAAA	-19	NA	93499351	93478471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93479285_93499275
transcript_26795.known	chr11	+	3622	13	FSM	ENSG00000042429.12	ENST00000638487.1	3622	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	59.7401781792529	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCCTTTGTATTTC	NA	False	NA	-18	True	TTTAAA	-44	NA	93784241	93813268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794249_93794440_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_26797.known	chr11	+	5087	12	FSM	ENSG00000042429.12	ENST00000251871.9	5087	12	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	18.4610378190223	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAGTAAGTTCACTTT	-4	True	NA	NA	False	AATAAA	-17	NA	93784281	93814963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_26798.known	chr11	+	2317	11	FSM	ENSG00000042429.12	ENST00000639724.1	2317	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	47.1772190787037	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAAAGTATGTGGTTT	21	False	NA	-13	True	TTTAAA	-24	NA	93784306	93812378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93811852
transcript_26799.known	chr11	+	3235	11	FSM	ENSG00000042429.12	ENST00000639189.1	3235	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	44.5089878563869	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATGGAGCTTGTGGG	7	True	NA	-6	True	AATAAA	-35	NA	93784292	93813307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_26803.known	chr11	+	2621	11	FSM	ENSG00000042429.12	ENST00000525026.6	2621	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	51.2391451919331	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAATACCTTTTTTTC	7	True	NA	14	True	AATAAA	-19	NA	93784292	93812405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807500_93807636_93809716_93809877_93811852
transcript_26818.known	chr11	+	1862	10	FSM	ENSG00000182919.15	ENST00000528099.5	1862	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.0570059359336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAAAATCAGTGT	-1	True	NA	NA	False	ATTAAA	-16	NA	93741658	93762303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93741962_93742095_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_26822.known	chr11	+	4163	9	FSM	ENSG00000182919.15	ENST00000354421.8	4163	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	26.6549127741961	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	12	True	NA	NA	False	NA	NA	NA	93741671	93764749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_26838.known	chr11	-	1728	9	FSM	ENSG00000166012.17	ENST00000546088.5	1728	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	182.370459162113	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGCATGTATTTTTGGC	5315	False	NA	-27	True	ATTAAA	-24	NA	93736175	93730271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733420_93734624_93734661_93734962
transcript_26841.known	chr11	+	4094	8	FSM	ENSG00000182919.15	ENST00000528288.5	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	69.0356311432505	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	NA	False	NA	NA	False	NA	NA	NA	93741590	93764749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93759741_93759859_93761514
transcript_26844.known	chr11	+	2417	8	FSM	ENSG00000182919.15	ENST00000617482.4	2417	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	67.1629149371671	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	NA	False	NA	29	True	AATAAA	-34	NA	93741593	93763102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93757315_93757466_93759741_93759859_93761514
transcript_26853.known	chr11	+	2442	8	FSM	ENSG00000182919.15	ENST00000540113.5	2442	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	67.1234014365196	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	NA	False	NA	29	True	AATAAA	-34	NA	93741593	93763102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_26858.known	chr11	+	8014	30	FSM	ENSG00000166004.15	ENST00000325212.11	8014	30	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	11.9887977835514	657	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGATTTCTTC	-8	True	NA	8	True	AATAAA	-16	NA	93661681	93730358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807_93668933_93669676_93669771_93675570_93675667_93679411_93679553_93683558_93683743_93683963_93684129_93687643_93687866_93691682_93691776_93691926_93692031_93695496_93695635_93696319_93696418_93696681_93700187_93702459_93702638_93702775_93702920_93706744_93706898_93721311_93721413_93721953_93722051_93723040_93723290_93724253_93724376_93725650_93725832_93726975_93727638_93728680_93728822_93729433_93729531_93729613_93729782_93729869_93729970_93730048_93730149_93730230
transcript_26864.known	chr11	+	574	6	FSM	ENSG00000182919.15	ENST00000533585.5	574	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	96.9234749686576	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCAGACTCTCGGGTTC	-3	True	NA	NA	False	AAGAAA	-43	NA	93741656	93754008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93741962_93742067_93747296_93747449_93750345_93750445_93753681_93753756_93753935
transcript_26885.known	chr11	+	2278	2	FSM	ENSG00000042429.12	ENST00000530819.1	2278	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	-4	True	NA	NA	False	NA	NA	NA	93784281	93789796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000
transcript_26887.known	chr11	+	353	1	FSM	ENSG00000254911.3	ENST00000530422.1	353	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGACAACTGCTGGGG	-6	True	NA	20	True	NA	NA	NA	93721512	93721865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93721500_93721900
transcript_26888.known	chr11	-	73	1	FSM	ENSG00000202314.1	ENST00000365444.1	73	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACATTAAATATTGCAT	9916	False	NA	-25	True	AATGAA	-21	NA	93731574	93731501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93731500_93731600
transcript_26889.known	chr11	-	737	4	FSM	ENSG00000166012.17	ENST00000534770.1	737	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	101.53926443609	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCTCCTATTGAGGAG	10	True	NA	NA	False	AATGAA	-44	NA	93741480	93737088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93737240_93738108_93738441_93739236_93739332_93741321
transcript_26890.known	chr11	+	552	6	FSM	ENSG00000182919.15	ENST00000530279.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	97.6843897457521	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGAGCAGGTCCATTTC	28	True	NA	NA	False	AATAAA	-42	NA	93741687	93753994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93741962_93742095_93747301_93747449_93750345_93750445_93753681_93753756_93753935
transcript_26891.known	chr11	-	3056	4	FSM	ENSG00000214376.6	ENST00000409977.2	3056	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGTCCTTTGTGTGTG	-18	True	NA	NA	False	AATAAA	-14	NA	93850618	93818231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93820613_93820742_93820884_93820996_93821324_93850411
transcript_26892.nnic	chr11	-	633	5	Antisense	novelGene_ENSG00000110218.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	3.35410196624968	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGTTTGTTTG	1265	False	NA	2	True	ATTAAA	-16	NA	94129531	94066970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_94067128_94067219_94067296_94067430_94067567_94067682_94067744_94129328
transcript_26895.nnic	chr11	-	725	4	Antisense	novelGene_ENSG00000110218.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3.85861230093008	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGTTTGTTTG	1265	False	NA	2	True	ATTAAA	-16	NA	94129531	94066970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_94067296_94067430_94067567_94067682_94067744_94129328
transcript_26898.nnic	chr11	-	798	4	Antisense	novelGene_ENSG00000110218.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4.24264068711928	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGTTTGTTTG	1268	False	NA	2	True	ATTAAA	-16	NA	94129528	94066970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_94067296_94067430_94067567_94082944_94083082_94129328
transcript_2690.known	chr1	+	717	3	FSM	ENSG00000117682.17	ENST00000487944.5	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	69.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGACATTAACAAAGAAGT	17	True	NA	NA	False	AAGAAA	-6	NA	26432344	26438734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167
transcript_26900.nnic	chr11	-	644	3	Antisense	novelGene_ENSG00000110218.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGTTTGTTTG	1285	False	NA	2	True	ATTAAA	-16	NA	94129511	94066970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_94067296_94067430_94067567_94129328
transcript_26902.nnic	chr11	-	841	3	Antisense	novelGene_ENSG00000110218.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGTTTGTTTG	1265	False	NA	2	True	ATTAAA	-16	NA	94129531	94066970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_94067296_94067430_94067744_94129328
transcript_26905.known	chr11	+	2852	5	FSM	ENSG00000110218.9	ENST00000227638.8	2852	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	21.901769334919	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTAAGCTTATTTCAT	-41	True	NA	11	True	AATAAA	-23	NA	94128840	94181968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94129494_94153490_94153631_94178368_94178593_94179601_94180258_94180789
transcript_26907.known	chr11	+	570	2	FSM	ENSG00000250519.7	ENST00000515097.2	570	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATATCGCTAGAGAGA	NA	False	NA	NA	False	NA	NA	NA	94238149	94279206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94238278_94278764
transcript_26911.known	chr11	+	1129	3	FSM	ENSG00000250519.7	ENST00000655054.1	1129	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAGAGAGAGCTGGGATT	NA	False	NA	NA	False	ATTAAA	-24	NA	94185438	94279573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94185582_94188906_94189084_94278764
transcript_26912.nic	chr11	-	2716	20	NIC	ENSG00000020922.13	novel	6841	20	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_9	34.6251793799168	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATGTCAGTATTTT	NA	False	NA	13	True	AATAAA	-31	NA	94493908	94419865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_26913.known	chr11	-	6841	20	FSM	ENSG00000020922.13	ENST00000323929.8	6841	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	60.7981082953999	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAAAGTGATTTTTAAA	-16	True	NA	-17	True	AATAAA	-35	NA	94493844	94415569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_26914.known	chr11	-	2588	19	FSM	ENSG00000020922.13	ENST00000323977.7	2588	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	61.6524758446713	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCATAATGAAAAACTATG	0	True	NA	3	True	AATAAA	-21	NA	94493874	94419875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_26918.nic	chr11	-	1862	14	ISM	ENSG00000020922.13	ENST00000323977.7	2588	19	-34	36431	-23	-10568	5prime_fragment	FALSE	canonical	3	156	junction_3	29.7911864970063	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAATGAAGAAGATGATG	NA	False	NA	NA	False	NA	NA	NA	94493908	94456306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_2692.known	chr1	+	297	2	FSM	ENSG00000117682.17	ENST00000527611.1	297	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGAGTCTTAGAATGGT	-5	True	NA	NA	False	NA	NA	NA	26432322	26433133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890
transcript_26920.nic	chr11	-	1552	11	ISM	ENSG00000020922.13	ENST00000323977.7	2588	19	-34	44240	-23	11100	5prime_fragment	FALSE	canonical	3	184	junction_7	27.8596482389854	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAGCTAGTTATTTTT	NA	False	NA	NA	False	NA	NA	NA	94493908	94464115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_26923.nic	chr11	-	892	4	ISM	ENSG00000020922.13	ENST00000536144.1	619	5	-31	1842	0	-1842	5prime_fragment	FALSE	canonical	3	184	junction_3	32.7854981491648	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACATGGTGGGACTGAA	-16	True	NA	NA	False	NA	NA	NA	94493844	94485611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_94486085_94490832_94490966_94492781_94492907_94493683
transcript_26924.known	chr11	-	2604	20	FSM	ENSG00000020922.13	ENST00000393241.8	2604	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	74.6238953805874	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTCATAATGAAAAACTA	-20	True	NA	1	True	AATAAA	-19	NA	94493848	94419877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445891_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493720
transcript_26925.known	chr11	+	587	4	FSM	ENSG00000168876.9	ENST00000544514.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	50.3388517946129	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCAGTGACTGTGGATGG	14	True	NA	NA	False	NA	NA	NA	94494003	94498214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494036_94496603_94496952_94497901_94497965_94498070
transcript_26927.known	chr11	+	1908	3	FSM	ENSG00000168876.9	ENST00000544612.6	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	-6	True	NA	2	True	AATAAA	-20	NA	94493983	94499578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494036_94496603_94496952_94498070
transcript_26928.known	chr11	+	760	3	FSM	ENSG00000168876.9	ENST00000534911.1	760	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	46	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAATACCAGAGTGGCT	-6	True	NA	NA	False	NA	NA	NA	94493983	94498263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494036_94496603_94497119_94498070
transcript_2693.known	chr1	-	535	1	FSM	ENSG00000223583.1	ENST00000446498.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATGGCACAGGAGTAAA	37	False	NA	NA	False	AAGAAA	-32	NA	26455187	26454652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26454700_26455200
transcript_26930.nic	chr11	+	1996	3	NIC	ENSG00000168876.9	novel	1908	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	49	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	41	False	NA	2	True	AATAAA	-20	NA	94494030	94499578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_94494171_94496603_94496952_94498070
transcript_26934.known	chr11	+	3002	2	FSM	ENSG00000168876.9	ENST00000544253.1	3002	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	18	True	NA	1	True	AATAAA	-19	NA	94494007	94499577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494036_94496603
transcript_26936.known	chr11	+	567	2	FSM	ENSG00000168876.9	ENST00000541144.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCCATCATACCTATC	39	False	NA	NA	False	NA	NA	NA	94494028	94497028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494171_94496603
transcript_26937.known	chr11	+	2149	2	FSM	ENSG00000168876.9	ENST00000538535.1	2149	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	3333	False	NA	1	True	AATAAA	-19	NA	94497322	94499577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94497965_94498070
transcript_26939.known	chr11	+	1844	2	FSM	ENSG00000168876.9	ENST00000302755.4	1844	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTTTTGAACAACACAAA	2610	False	NA	-14	True	AATAAA	-4	NA	94496599	94499562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94496952_94498070
transcript_2694.known	chr1	+	656	4	FSM	ENSG00000117682.17	ENST00000374186.7	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	103.45476735699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATATTGAGGGGTGTCA	1	True	NA	NA	False	AATAAA	-18	NA	26432328	26443080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442707
transcript_2695.known	chr1	+	705	6	FSM	ENSG00000117682.17	ENST00000436153.6	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	75.5687766210358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGCCTGTTGGATCCCA	6	True	NA	NA	False	NA	NA	NA	26432389	26447639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558
transcript_26958.nnic	chr11	+	884	2	NNC	ENSG00000255666.7	novel	532	5	NA	NA	2832	4584	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGTGTTTTGTCCAA	8400	False	NA	34	True	AATAAA	-25	NA	94650310	94657468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_94650538_94656811
transcript_26959.nic	chr11	+	359	2	ISM	ENSG00000255666.7	ENST00000542479.1	532	5	2855	-2	2855	0	3prime_fragment	FALSE	canonical	3	185	junction_1	0	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTGACACAATTATG	8423	False	NA	27	True	AAGAAA	-24	NA	94650333	94651631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_94650538_94651476
transcript_26961.nnic	chr11	+	1203	2	NNC	ENSG00000255666.7	novel	532	5	NA	NA	2872	4584	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGAGTGTTTTGTCCAA	-2	True	NA	34	True	AATAAA	-25	NA	94650350	94657468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_94650538_94656452
transcript_26973.known	chr11	-	1522	7	FSM	ENSG00000150316.12	ENST00000279839.8	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	36.2832223241297	4803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTATCTTGGAGGAT	5	True	NA	NA	False	AATAAA	-17	NA	94973556	94962619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971066_94971374_94971488_94972054_94972194_94973497
transcript_26974.known	chr11	-	1113	6	FSM	ENSG00000150316.12	ENST00000621358.4	1113	6	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	36.9616016968962	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAGACTGTAAAACGT	NA	False	NA	-53	True	ATTAAA	-21	NA	94973586	94963367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971488_94972054_94972194_94973497
transcript_26975.known	chr11	+	2951	3	FSM	ENSG00000186280.7	ENST00000335080.6	2951	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTCAAATATTGTGT	17	True	NA	NA	False	ATTAAA	-25	NA	94973708	94999519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94974069_94975653_94975749_94997023
transcript_26978.known	chr11	+	560	2	FSM	ENSG00000263465.5	ENST00000638426.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAGAATAAAATTAGA	202	False	NA	-21	True	NA	NA	NA	95068057	95069088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95068184_95068654
transcript_26981.known	chr11	+	4307	1	FSM	ENSG00000263465.5	ENST00000587424.3	4307	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGGTTGTTTCCTATT	-15	True	NA	40	True	AATAAA	-34	NA	95066918	95071225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95066900_95071200
transcript_26984.known	chr11	+	1290	4	FSM	ENSG00000245552.8	ENST00000534864.6	1290	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCATCAGAGTGAACAGG	NA	False	NA	NA	False	ATTAAA	-29	NA	95151052	95209111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95151503_95157627_95157804_95204805_95204913_95208554
transcript_26988.known	chr11	+	2211	5	FSM	ENSG00000245552.8	ENST00000543150.3	2215	5	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_1	2.9474565306379	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTCTGGCAGAATCT	NA	False	NA	NA	False	AATAAA	-12	NA	95230395	95234387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95230496_95231124_95232177_95232589_95232675_95232879_95232920_95233453
transcript_26990.known	chr11	+	1858	3	FSM	ENSG00000245552.8	ENST00000668554.2	1946	3	0	88	0	-88	multi-exon	FALSE	canonical	2	3	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAATCCTTATGCTATT	450	False	NA	NA	False	CATAAA	-28	NA	95231253	95234303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95232177_95232589_95232675_95233453
transcript_26994.known	chr11	-	2329	18	FSM	ENSG00000087053.20	ENST00000481642.6	2329	18	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_14	201.459226815761	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGTAAGATCAGGGGC	348	False	NA	NA	False	NA	NA	NA	95924123	95835289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95866402_95866487_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_26995.known	chr11	-	3420	17	FSM	ENSG00000087053.20	ENST00000409459.5	3420	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	167.802897769973	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTCCAAAGTTGCCA	-1	True	NA	-1	True	ATTAAA	-28	NA	95924096	95834087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_26997.known	chr11	-	3457	17	FSM	ENSG00000087053.20	ENST00000676261.1	3457	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	174.000359195032	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTAAACTTTGTTCT	-3	True	NA	-16	True	ATTAAA	-13	NA	95924098	95834102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95914241_95914313_95923874
transcript_26998.known	chr11	-	4629	17	FSM	ENSG00000087053.20	ENST00000675196.1	4629	17	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_16	190.945836561052	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	555	False	NA	-6	True	AATAAA	-16	NA	95923916	95832881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923691
transcript_27.known	ERCC-00062	+	1007	1	FSM	ERCC-00062A	DQ516786	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	0	1007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00062_+_0_1000
transcript_27003.known	chr11	-	3350	16	FSM	ENSG00000087053.20	ENST00000352297.11	3350	16	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_15	95.6050672762113	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTCCAAAGTTGCC	-5	True	NA	-2	True	ATTAAA	-27	NA	95924100	95834088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923874
transcript_27004.known	chr11	-	4504	16	FSM	ENSG00000087053.20	ENST00000676166.1	4504	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	139.641668407233	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	607	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
transcript_27006.known	chr11	-	4582	16	FSM	ENSG00000087053.20	ENST00000675320.1	4582	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	171.287464677237	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923874
transcript_27008.known	chr11	-	4519	15	FSM	ENSG00000087053.20	ENST00000676388.1	4519	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	157.560613538966	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865590_95865677_95888155_95888262_95923874
transcript_27010.known	chr11	-	4387	15	FSM	ENSG00000087053.20	ENST00000675454.1	4387	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_14	139.758702405107	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	653	False	NA	-6	True	AATAAA	-16	NA	95923818	95832881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923691
transcript_27012.known	chr11	-	4474	15	FSM	ENSG00000087053.20	ENST00000675652.1	4474	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	155.047540438146	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95914241_95914313_95923874
transcript_27020.nic	chr11	-	1048	9	ISM	ENSG00000087053.20	ENST00000346299.10	4495	15	-4	16896	-4	-14486	5prime_fragment	FALSE	canonical	3	247	junction_8	102.125841489801	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGATGAAAAATACCTTCA	-16	True	NA	NA	False	NA	NA	NA	95924111	95849775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
transcript_27021.known	chr11	-	4403	14	FSM	ENSG00000087053.20	ENST00000676272.1	4403	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	150.602105173999	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95923874
transcript_27025.known	chr11	-	4601	16	FSM	ENSG00000087053.20	ENST00000393223.8	4601	16	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_15	148.49128668788	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	348	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914334_95923874
transcript_27026.known	chr11	-	3536	18	FSM	ENSG00000087053.20	ENST00000675489.1	3536	18	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	194.260820640669	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCTTGTCCAAAGTT	2	True	NA	-5	True	ATTAAA	-24	NA	95924093	95834091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_27034.known	chr11	+	3141	11	FSM	ENSG00000166037.11	ENST00000325542.10	3141	11	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	40.9336047765158	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGGCTCTGAGTCCT	-4	True	NA	27	True	ATTAAA	-21	NA	95790497	95832693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_27039.known	chr11	-	3823	11	FSM	ENSG00000077458.13	ENST00000398187.6	3823	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	65.3730831458942	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTATTAGTTTTCAATGG	1327	False	NA	-8	True	AATAAA	-16	NA	95789615	95768952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95771651_95775921_95776024_95778821_95778958_95779077_95779136_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_27043.known	chr11	+	3098	10	FSM	ENSG00000166037.11	ENST00000325486.9	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	136.944433175569	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGGCTCTGAGTC	-41	True	NA	25	True	ATTAAA	-19	NA	95790460	95832691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95827785_95828028_95829186_95829332_95831025
transcript_27048.known	chr11	-	2546	10	FSM	ENSG00000077458.13	ENST00000536839.1	2546	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	52.8459209213416	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTCTCTTAATAATTT	1381	False	NA	NA	False	TTTAAA	-29	NA	95789561	95770114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95771651_95775921_95776024_95778821_95778955_95779606_95779688_95779878_95779927_95783064_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95789391
transcript_2706.known	chr1	+	1148	7	FSM	ENSG00000198830.11	ENST00000619352.4	1148	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	4362.60108447039	11450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTCTGATCTTTT	9	False	NA	NA	False	AATAAA	-22	NA	26472514	26475970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472563_26472607_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_27063.known	chr11	+	2084	7	FSM	ENSG00000166037.11	ENST00000538658.5	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	42.5143766533419	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTATATTTATTTA	77	False	NA	11	True	AGTAAA	-18	NA	95790658	95823215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_27067.known	chr11	+	870	6	FSM	ENSG00000166037.11	ENST00000541365.5	870	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	190.864978453356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGTTAAAATGTGAGAA	20	True	NA	NA	False	NA	NA	NA	95790521	95818903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799236_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826
transcript_2707.known	chr1	+	1940	6	FSM	ENSG00000198830.11	ENST00000361427.6	1940	6	0	0	0	0	multi-exon	FALSE	canonical	3	10833	junction_2	616.10667907433	14282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGTCCATTCCCTTA	8	True	NA	10	True	AATAAA	-17	NA	26472439	26476642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_27070.known	chr11	+	851	6	FSM	ENSG00000166037.11	ENST00000544522.5	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	214.249947491242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTGTCTTTTT	11	True	NA	NA	False	NA	NA	NA	95790512	95817903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95795515_95795560_95799231_95799389_95812931_95813112_95813467_95813590_95817786
transcript_27078.known	chr11	-	730	5	FSM	ENSG00000077458.13	ENST00000540054.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	72.0811174996614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTACTTTGAAATCATA	-33	True	NA	NA	False	NA	NA	NA	95790409	95783064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95783265_95786118_95786275_95787623_95787679_95788498_95788564_95790155
transcript_2708.known	chr1	+	320	4	FSM	ENSG00000198830.11	ENST00000468388.5	320	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5316.83441741627	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGGTAAGTGCTAACA	18	True	NA	NA	False	AAAAAG	-45	NA	26472449	26474128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472628_26473459_26473528_26473702_26473733_26474084
transcript_27083.known	chr11	+	1936	11	FSM	ENSG00000166037.11	ENST00000540830.5	1936	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.168162132968	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTGTGGGTGTGATTT	31	True	NA	9	True	NA	NA	NA	95790532	95831543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799231_95799389_95812951_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_27084.known	chr11	+	2911	11	FSM	ENSG00000166037.11	ENST00000541150.5	2911	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	129.894919069223	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGGCTCTGAGTC	1185	False	NA	25	True	ATTAAA	-19	NA	95795541	95832691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95795560_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_27085.known	chr11	-	7121	5	FSM	ENSG00000184384.14	ENST00000524717.6	7121	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.3166247903554	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGTAGTCTGTAGT	17	True	NA	-4	True	ATTAAA	-22	NA	96343195	95976597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95979964_95985530_95985643_95991519_95991724_96091891_96093518_96341382
transcript_27089.known	chr11	-	2817	11	FSM	ENSG00000149231.16	ENST00000679856.1	2817	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	64.6628950790173	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	8	False	NA	NA	False	AATAAA	-16	NA	96389936	96352778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96385936_96386021_96386253_96386294_96387529_96387614_96389843
transcript_2709.known	chr1	+	1030	4	FSM	ENSG00000198830.11	ENST00000479815.5	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	10986	junction_1	612.498707481629	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAATTTTGTTTTACTT	31	False	NA	NA	False	TATAAA	-3	NA	26472462	26475228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472628_26473482_26474136_26474571_26474668_26475112
transcript_27093.known	chr11	-	2880	11	FSM	ENSG00000149231.16	ENST00000645500.1	2880	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	63.8063476466096	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-4	True	NA	NA	False	AATAAA	-16	NA	96389948	96352778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96388694_96388830_96389843
transcript_27097.known	chr11	-	2611	10	FSM	ENSG00000149231.16	ENST00000646050.1	2611	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	51.3977469842962	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAATAAAGTAAAATGG	23	False	96389944	NA	False	NA	NA	NA	96389921	96352804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359098_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_27098.known	chr11	-	3156	10	FSM	ENSG00000149231.16	ENST00000679708.1	3156	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	44.3014365901448	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	12	True	NA	NA	False	AATAAA	-16	NA	96389880	96352778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389364
transcript_27099.known	chr11	-	2715	10	FSM	ENSG00000149231.16	ENST00000646818.2	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	30.8760964717584	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAACCCTGTGTGTTC	-20	True	NA	NA	False	AATAAA	-22	NA	96389912	96352772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_2710.known	chr1	+	952	5	FSM	ENSG00000198830.11	ENST00000466194.1	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	10833	junction_1	594.497687127545	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCATTGGTTACCAGTG	-17	True	NA	NA	False	NA	NA	NA	26473205	26475565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_27100.known	chr11	-	2563	10	FSM	ENSG00000149231.16	ENST00000647080.1	2563	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	56.0233637329161	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGCAGAGTGAACAAATG	23	False	96389944	NA	False	AATAAA	-8	NA	96389921	96352786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96365126_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_27108.known	chr11	-	2695	9	FSM	ENSG00000149231.16	ENST00000680763.1	2695	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	59.8534669004227	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAATGAACCCTGTGT	8	False	NA	NA	False	AATAAA	-18	NA	96389936	96352776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96387529_96387614_96389843
transcript_2711.known	chr1	+	3192	22	FSM	ENSG00000117676.14	ENST00000374168.7	3192	22	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_13	31.9575256662968	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTCTCCTGCACTCTT	-13	True	NA	30	True	AATAAA	-14	NA	26529760	26575025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26529984_26536924_26536970_26546866_26546984_26547188_26547271_26551396_26551478_26551643_26551724_26553390_26553498_26554213_26554252_26554595_26554739_26555150_26555222_26555536_26555626_26556653_26556719_26556997_26557101_26558806_26558938_26560725_26560852_26561044_26561135_26561504_26561664_26571448_26571611_26571848_26571926_26572175_26572294_26573223_26573362_26574078
transcript_27112.known	chr11	-	2594	8	FSM	ENSG00000149231.16	ENST00000679960.1	2594	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	57.1885531574711	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	23	False	96389944	NA	False	AATAAA	-16	NA	96389921	96352778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96389843
transcript_27117.known	chr11	-	5328	7	FSM	ENSG00000149231.16	ENST00000679696.1	5328	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	61.8376009308971	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAGAGCCAAATCATGA	-25	True	NA	NA	False	NA	NA	NA	96389917	96349240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96389843
transcript_27127.known	chr11	-	3972	5	FSM	ENSG00000149231.16	ENST00000530106.2	3972	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	38.8908729652601	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGTGCAGGTTTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	96389956	96380538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_27130.known	chr11	-	1776	4	FSM	ENSG00000149231.16	ENST00000680322.1	1776	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.5371000997719	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGATTACAAGCATGA	11	False	NA	NA	False	NA	NA	NA	96389933	96352152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96386253_96386294_96387529_96387614_96389843
transcript_27133.known	chr11	+	3140	2	FSM	ENSG00000183340.7	ENST00000332349.5	3140	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTTAAAGGTTTAA	-14	True	NA	5	True	AATAAA	-20	NA	96390012	96393561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_96390074_96390482
transcript_27138.known	chr11	+	1855	1	FSM	ENSG00000165895.19	ENST00000303130.4	1855	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATTTAGTCTTTGTA	NA	False	NA	17	True	AATAAA	-13	NA	100992079	100993934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_100992100_100993900
transcript_27139.known	chr11	-	1865	2	FSM	ENSG00000248027.1	ENST00000501397.1	1865	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGTCTTATTT	NA	False	NA	0	True	TATAAA	-21	NA	100687955	100684161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_100685704_100687632
transcript_27142.known	chr11	+	7048	11	FSM	ENSG00000110318.15	ENST00000263468.13	7048	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	3.9293765408777	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTGATTTGGTTTTT	-7	True	NA	NA	False	AATAAA	-22	NA	101915009	102001062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_101915413_101922640_101922761_101944264_101944411_101948030_101948143_101958167_101958367_101961740_101963881_101978346_101978460_101981888_101981965_101986831_101987042_101992777_101992843_101997598
transcript_27144.known	chr11	+	2193	7	FSM	ENSG00000137691.13	ENST00000434758.7	2193	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	11.6285090283416	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAAATGTCTGTTTGC	-8	True	NA	NA	False	CATAAA	-14	NA	102047436	102084554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214_102081282_102083070
transcript_27148.known	chr11	+	845	6	FSM	ENSG00000137691.13	ENST00000526781.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	10.5185550338438	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGGAGAACAATT	10	True	NA	NA	False	ATTAAA	-16	NA	102047454	102081435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214
transcript_27149.nnic	chr11	+	995	6	NIC	ENSG00000137691.13	novel	2193	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	18.2581488656435	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGGAATTTTTACAGAA	-12	True	NA	NA	False	AATAAA	-16	NA	102047432	102083419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102083070
transcript_27153.nnic	chr11	+	695	5	NNC	ENSG00000137691.13	novel	845	6	NA	NA	-62	-8723	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	15.2151240547029	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAGGAGTAAAAGAATCT	NA	False	NA	NA	False	AATAAA	-23	NA	102047374	102067388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102067224
transcript_2716.known	chr1	+	4377	4	FSM	ENSG00000060642.12	ENST00000674222.1	4377	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	23.4568161143456	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	-11	True	NA	NA	False	AATAAA	-16	NA	26787966	26800659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26787990_26790758_26790894_26794112_26795235_26797562
transcript_27164.nic	chr11	+	1266	4	ISM	ENSG00000137691.13	ENST00000526781.5	845	6	-80	14049	-62	-8725	5prime_fragment	FALSE	canonical	3	41	junction_2	2.86744175568088	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCCAGGAGTAAAAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	102047374	102067386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484
transcript_27167.known	chr11	+	520	4	FSM	ENSG00000137691.13	ENST00000534360.1	520	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.1712593442672	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTACACAACATCATT	13	True	NA	NA	False	AATAAA	-19	NA	102047457	102076111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102075872
transcript_27172.known	chr11	+	349	2	FSM	ENSG00000137691.13	ENST00000529204.1	349	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTACACAACATCATT	NA	False	NA	NA	False	AATAAA	-19	NA	102066541	102076111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102066652_102075872
transcript_27173.known	chr11	+	1638	9	FSM	ENSG00000137693.14	ENST00000524575.5	1638	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	39.5614632565581	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAAACTTTTTAT	66	False	NA	NA	False	NA	NA	NA	102112513	102230152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102112746_102114143_102114395_102162455_102162572_102186017_102186132_102205892_102206075_102209516_102209565_102223621_102223753_102227468_102227582_102229701
transcript_27176.known	chr11	+	747	1	FSM	ENSG00000243777.1	ENST00000463969.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTTTGAGTAACAAATA	NA	False	NA	NA	False	NA	NA	NA	102295059	102295806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102295100_102295800
transcript_27177.known	chr11	+	6877	9	FSM	ENSG00000023445.16	ENST00000263464.9	6877	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.7806247497998	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGATCTATTTGCTGAC	13	True	NA	NA	False	AATAAA	-17	NA	102317483	102339403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102317572_102321836_102325363_102325465_102325566_102328051_102328131_102328896_102328946_102330998_102331242_102335965_102336221_102336759_102336802_102336908
transcript_27183.known	chr11	+	2617	10	FSM	ENSG00000110330.10	ENST00000532672.5	2617	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.088756048876	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	-8	True	NA	23	True	AATAAA	-14	NA	102347246	102378669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102347377_102348597_102348765_102349877_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_27185.nnic	chr11	+	2190	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	104.088756048876	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	-48	True	NA	24	True	AATAAA	-15	NA	102347206	102378670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_102347377_102348597_102348765_102350345_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_27189.known	chr11	+	3764	9	FSM	ENSG00000110330.10	ENST00000227758.7	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	36.8162667852133	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	-41	True	NA	24	True	AATAAA	-15	NA	102347213	102378670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102347377_102348597_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_27197.nnic	chr11	+	1216	4	NNC	ENSG00000110330.10	novel	1927	9	NA	NA	11954	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	143.597431112894	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	NA	False	NA	24	True	AATAAA	-15	NA	102374695	102378670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_102374934_102377495_102377751_102377856_102377899_102377989
transcript_27199.nnic	chr11	+	1052	4	NNC	ENSG00000110330.10	novel	1927	9	NA	NA	12033	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	151.546105928929	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	NA	False	NA	24	True	AATAAA	-15	NA	102374774	102378670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_102374849_102377495_102377751_102377856_102377899_102377989
transcript_27200.known	chr11	+	709	3	FSM	ENSG00000110330.10	ENST00000527808.1	709	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTCAGTTGATCAAGAA	-44	True	NA	NA	False	AAAAAG	-44	NA	102347210	102349013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102347377_102348280_102348408_102348597
transcript_27201.nic	chr11	+	256	2	ISM	ENSG00000110330.10	ENST00000534646.5	562	3	-10	1552	-4	-330	5prime_fragment	FALSE	canonical	3	389	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATATAGTTTGAATTCTA	-48	True	NA	14	True	AATAAA	-32	NA	102347206	102348683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_102347377_102348597
transcript_27202.known	chr11	+	720	5	FSM	ENSG00000110330.10	ENST00000533742.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	131.3228369325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATCTTCAAAAACTGTC	-31	True	NA	NA	False	NA	NA	NA	102347223	102377691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102347377_102362895_102362975_102363667_102363717_102368305_102368549_102377495
transcript_27203.known	chr11	-	3304	5	FSM	ENSG00000152558.15	ENST00000398136.7	3304	5	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_4	27.4499544626216	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTGTGTGATTTTG	36	True	NA	-12	True	AATAAA	-19	NA	102452765	102396331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_102398892_102401538_102401693_102401915_102402207_102448811_102448869_102452523
transcript_27206.known	chr11	+	692	2	FSM	ENSG00000255337.1	ENST00000528717.1	692	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAATAAAAATCATCC	175	False	NA	-19	True	NA	NA	NA	102452918	102462008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102453050_102461447
transcript_27207.known	chr11	-	1759	10	FSM	ENSG00000166670.10	ENST00000279441.9	1759	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.955813918560292	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTAGAACAATTCATGT	-5	True	NA	NA	False	AATAAA	-27	NA	102780628	102770501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_102770894_102772011_102772116_102772846_102773007_102775187_102775322_102776279_102776425_102776611_102776777_102778623_102778750_102779212_102779362_102779503_102779746_102780486
transcript_27214.known	chr11	+	562	2	FSM	ENSG00000255282.6	ENST00000544820.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCCTTTTTGGATGC	NA	False	NA	NA	False	NA	NA	NA	102747009	102751791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102747121_102751340
transcript_27218.known	chr11	-	1535	8	FSM	ENSG00000137692.12	ENST00000531571.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	353.301744191816	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	10	True	NA	-35	True	AATAAA	-10	NA	103092161	103062097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091515
transcript_2722.known	chr1	+	4673	4	FSM	ENSG00000060642.12	ENST00000674202.1	4673	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	25.31578339473	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	-28	True	NA	NA	False	AATAAA	-16	NA	26787949	26800659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26788269_26790758_26790894_26794112_26795235_26797562
transcript_27220.known	chr11	-	1310	8	FSM	ENSG00000137692.12	ENST00000529281.5	1310	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	339.465486208143	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTGAATATTGAAGTT	-6	True	NA	-30	True	NA	NA	NA	103092177	103062170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091683
transcript_27223.known	chr11	-	1030	5	FSM	ENSG00000137692.12	ENST00000531543.1	1030	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	449.226557540847	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTTGTGACAAAGGC	16	False	103092205	36	True	AATAAA	-3	NA	103092189	103062104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103091786
transcript_27228.nic	chr11	+	1988	10	ISM	ENSG00000187240.17	ENST00000648198.1	4528	25	-49	34317	-49	-34317	5prime_fragment	FALSE	canonical	1	1	junction_8	2.82842712474619	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTGTTTACAAAAATGAG	NA	False	NA	NA	False	AGTAAA	-12	NA	103109360	103121785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_103109770_103113536_103113708_103114102_103114239_103115176_103115296_103116569_103116715_103117630_103117864_103120446_103120582_103120688_103120803_103120924_103121037_103121371
transcript_27236.known	chr11	-	1002	5	FSM	ENSG00000256422.7	ENST00000666753.1	1002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTAGTTTTCAAGGC	-4	True	NA	NA	False	NA	NA	NA	104609373	104568233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104572556_104572598_104595481_104595534_104609236
transcript_27237.known	chr11	-	1170	4	FSM	ENSG00000256422.7	ENST00000667686.1	1170	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTCTTTAAAAGCTTT	-4	True	NA	NA	False	AATAAA	-18	NA	104609373	104568119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104572075_104572223_104609236
transcript_27238.known	chr11	-	666	4	FSM	ENSG00000256422.7	ENST00000653300.1	666	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAGAATTTTGTGAAT	40	False	104609337	NA	False	AATAAA	-18	NA	104609329	104568484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104595481_104595534_104609236
transcript_27240.known	chr11	-	1052	4	FSM	ENSG00000256422.7	ENST00000665834.2	1055	4	3	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGATACCTTCTTTAAA	2	True	NA	NA	False	AATAAA	-12	NA	104609367	104568125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104572556_104572598_104609236
transcript_27242.known	chr11	-	818	5	FSM	ENSG00000256422.7	ENST00000658586.1	818	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAGAATTTTGTGAAT	24	False	NA	NA	False	AATAAA	-18	NA	104609345	104568484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104572075_104572223_104572556_104572598_104609236
transcript_27243.known	chr11	-	673	4	FSM	ENSG00000256422.7	ENST00000545630.2	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAGAATTTTGTGAAT	-1	True	NA	NA	False	AATAAA	-18	NA	104609351	104568484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568918_104569047_104569132_104572556_104572598_104609236
transcript_27244.known	chr11	+	2994	11	FSM	ENSG00000152578.13	ENST00000393125.6	2994	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	18.088670487352	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	10	False	NA	NA	False	AATAAA	-18	NA	105610028	105913110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_27249.nnic	chr11	+	646	4	NNC	ENSG00000152578.13	novel	1439	4	NA	NA	186	2327	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	37.4640568486056	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGAAAATGAGTGATGT	63	False	NA	NA	False	ATTAAA	-23	NA	105610451	105616763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_105610610_105610907_105611086_105612275_105612435_105616612
transcript_2725.known	chr1	+	2181	4	FSM	ENSG00000060642.12	ENST00000374145.6	2181	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	35.1220095603249	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATAAAGTGGGACCATT	-17	True	NA	2	True	NA	NA	NA	26788176	26798268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26788395_26790758_26790894_26794112_26795235_26797562
transcript_27251.known	chr11	+	2647	3	FSM	ENSG00000152578.13	ENST00000527669.1	2647	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	17.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAACATGATAAATAT	28	False	NA	NA	False	AATAAA	-35	NA	105610120	105614436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105610429_105610907_105611086_105612275
transcript_27254.known	chr11	+	367	3	FSM	ENSG00000152578.13	ENST00000527177.5	367	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	41.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAACATAAGCTAT	-5	True	NA	NA	False	NA	NA	NA	105609993	105612434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105610024_105610907_105611086_105612275
transcript_27255.known	chr11	+	470	3	FSM	ENSG00000152578.13	ENST00000525921.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	41	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAACATAAGCTAT	24	False	NA	NA	False	NA	NA	NA	105610265	105612434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105610429_105610937_105611086_105612275
transcript_27257.known	chr11	+	2778	10	FSM	ENSG00000152578.13	ENST00000428631.6	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	18.4216726898335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	12	True	NA	NA	False	AATAAA	-18	NA	105610723	105913110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_27263.known	chr11	-	4103	3	FSM	ENSG00000170903.12	ENST00000301919.9	4103	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	40.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-6	True	NA	2	True	AATAAA	-43	NA	106022240	106007898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106010111_106010455_106011068_106020961
transcript_27264.nic	chr11	-	3409	3	NIC	ENSG00000170903.12	novel	4103	3	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_2	38.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	NA	False	NA	2	True	AATAAA	-43	NA	106022420	106007898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_106010111_106010455_106011068_106021835
transcript_27267.known	chr11	-	948	3	FSM	ENSG00000170903.12	ENST00000530788.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	29.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGATGAGCCTCATTTG	NA	False	NA	NA	False	NA	NA	NA	106022403	106009983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106010111_106010455_106011068_106022194
transcript_2727.known	chr1	+	4972	4	FSM	ENSG00000060642.12	ENST00000674273.1	4972	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	33.2498955721	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGCCTCCTGTCCTCA	1	True	NA	NA	False	AATAAA	-9	NA	26788194	26800652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26788820_26790758_26790894_26794112_26795235_26797562
transcript_27273.known	chr11	-	780	2	FSM	ENSG00000170903.12	ENST00000530108.1	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTGACTGGCGAGCAC	-16	True	NA	NA	False	NA	NA	NA	106022250	106010702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106011068_106021835
transcript_27280.known	chr11	-	3840	4	FSM	ENSG00000182359.15	ENST00000531837.2	3840	4	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_3	30.6195289897731	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	-13	True	NA	NA	False	AATAAA	-19	NA	106077347	106051097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106054456_106058864_106059110_106076506_106076708_106077311
transcript_27284.known	chr11	-	3751	3	FSM	ENSG00000182359.15	ENST00000526793.5	3751	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	36.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	NA	False	NA	NA	False	AATAAA	-19	NA	106077459	106051097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106054456_106058864_106059110_106077311
transcript_27287.known	chr11	-	874	2	FSM	ENSG00000182359.15	ENST00000531482.2	874	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTGCATTATGTTCA	NA	False	NA	NA	False	AATAAA	-17	NA	106059111	106057425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106058053_106058864
transcript_27288.known	chr11	+	2767	6	FSM	ENSG00000149313.11	ENST00000278618.9	2767	6	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_3	15.6665248220529	1473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGAGCCTGACACTG	-3	True	NA	21	True	AATAAA	-23	NA	106077661	106098695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_106077894_106079466_106079693_106090556_106090679_106091315_106091478_106094582_106094655_106096742
transcript_27289.known	chr11	-	504	2	FSM	ENSG00000182359.15	ENST00000528483.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACCTAATTAGGCTG	779	False	NA	NA	False	AAAACA	-3	NA	106076639	106058738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106059110_106076506
transcript_27291.known	chr11	-	3278	18	FSM	ENSG00000152404.16	ENST00000282251.10	3244	18	-19	-15	-19	15	multi-exon	FALSE	canonical	3	91	junction_8	13.6247281805209	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTATTTCTGGATT	NA	False	NA	3	True	ATTAAA	-36	NA	107457844	107326344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107416208_107416299_107418193_107418288_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
transcript_27307.nic	chr11	-	436	3	ISM	ENSG00000152404.16	ENST00000282251.10	3244	18	-124	128126	-124	-105775	5prime_fragment	FALSE	canonical	3	120	junction_2	9	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGAAAAAAACAATGAGTC	NA	False	NA	5	True	AAAAAG	-39	NA	107457949	107454485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_107454573_107455665_107455777_107457711
transcript_27309.nic	chr11	-	349	2	ISM	ENSG00000152404.16	ENST00000282251.10	3244	18	-124	129306	-124	-106955	5prime_fragment	FALSE	canonical	3	120	junction_1	0	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATACTAACAGGTTTAC	NA	False	NA	NA	False	NA	NA	NA	107457949	107455665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_107455777_107457711
transcript_27311.known	chr11	-	4067	12	FSM	ENSG00000137760.15	ENST00000428149.7	4067	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	5.38286230657726	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTCTGCTCATT	-4	True	NA	-1	True	AATAAA	-19	NA	107565735	107502726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565600
transcript_27312.known	chr11	-	2114	12	FSM	ENSG00000137760.15	ENST00000417449.6	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	9.21281895284235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTACCTGAACACATCA	-11	True	NA	NA	False	NA	NA	NA	107565742	107504657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565629
transcript_2732.known	chr1	+	1308	1	FSM	ENSG00000175793.12	ENST00000339276.6	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTCTCTTCCAGTT	0	True	NA	11	True	AATAAA	-18	NA	26863148	26864456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26863100_26864500
transcript_27321.known	chr11	-	2769	8	FSM	ENSG00000110660.15	ENST00000525815.6	2769	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	11.780301787479	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTGGTTTCTTTG	8	True	NA	NA	False	ATTAAA	-25	NA	107858787	107790990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_27323.nic	chr11	-	1108	7	ISM	ENSG00000110660.15	ENST00000525815.6	2769	8	-38	11899	-17	3955	5prime_fragment	FALSE	canonical	3	136	junction_3	9.46484724300046	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCATTGGTCAGGCCT	5	True	NA	NA	False	AATAAA	-22	NA	107858825	107802889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_27325.known	chr11	+	345	1	FSM	ENSG00000240652.1	ENST00000474540.1	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	23	False	NA	-23	True	NA	NA	NA	107908419	107908764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_107908400_107908800
transcript_27326.known	chr11	+	1885	2	FSM	ENSG00000179331.3	ENST00000320578.3	1885	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGTCAAAATTATTAAT	16	True	NA	NA	False	AGTAAA	-17	NA	107928447	107963482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_107928796_107961945
transcript_27329.known	chr11	+	6171	19	FSM	ENSG00000166266.14	ENST00000393094.7	6171	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	12.8582010146573	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTACCTATCCAGAAAA	-31	True	NA	13	True	AATAAA	-15	NA	108008897	108107761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189
transcript_2733.known	chr1	-	4665	5	FSM	ENSG00000142751.15	ENST00000374135.9	4665	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	20.1494416796099	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTATTCTCTTTT	-6	True	NA	0	True	AATAAA	-18	NA	26890283	26876131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26879750_26884159_26884291_26885972_26886134_26888968_26889126_26889685
transcript_27333.known	chr11	+	1498	13	FSM	ENSG00000075239.14	ENST00000673531.1	1498	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	131.529754766322	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAGATAAGCTGTTTC	1	True	NA	8	True	NA	NA	NA	108121566	108147470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108127885_108127980_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_27338.known	chr11	+	1537	12	FSM	ENSG00000075239.14	ENST00000265838.9	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_7	17.9618512178883	2083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	1	True	NA	40	True	AATAAA	-37	NA	108121566	108147603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_27343.known	chr11	+	1321	11	FSM	ENSG00000075239.14	ENST00000672031.1	1321	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	108.133667282674	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTGTGGGTCAGCTTAT	1	True	NA	-10	True	NA	NA	NA	108121566	108147452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108146201_108146360_108147269
transcript_27346.known	chr11	+	1222	9	FSM	ENSG00000075239.14	ENST00000672907.1	1222	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.983029045027	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	1	True	NA	40	True	AATAAA	-37	NA	108121566	108147603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_27349.known	chr11	+	1174	8	FSM	ENSG00000075239.14	ENST00000672367.1	1174	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	124.343828777716	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	1	True	NA	40	True	AATAAA	-37	NA	108121566	108147603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_27354.known	chr11	+	506	4	FSM	ENSG00000075239.14	ENST00000524833.5	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	6.16441400296898	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGCCAACATGGTGAAAC	1	True	NA	NA	False	NA	NA	NA	108121566	108134448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220
transcript_27357.known	chr11	-	605	1	FSM	ENSG00000288012.1	ENST00000660738.1	605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGATGACTCTTAATATT	NA	False	NA	2	True	AGTAAA	-19	NA	108009282	108008677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_108008700_108009300
transcript_27358.known	chr11	+	1345	6	FSM	ENSG00000075239.14	ENST00000299355.10	1345	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	142.28225469116	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATAATGCAAGTGATTT	1	True	NA	NA	False	ATTAAA	-16	NA	108121566	108136939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108136069
transcript_27359.known	chr11	+	2258	8	FSM	ENSG00000075239.14	ENST00000531813.5	2258	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_4	121.530041637482	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAACAACCCCCCCCC	18	False	NA	NA	False	AGTAAA	-9	NA	108121583	108143946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108138897_108139042_108140064_108140216_108141604_108141701_108142436
transcript_27360.known	chr11	+	1384	11	FSM	ENSG00000075239.14	ENST00000672580.1	1384	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	111.158670377079	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAACCTTGAAAAGTTT	4846	False	NA	24	True	AATAAA	-21	NA	108121552	108147587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_27361.known	chr11	-	6113	18	FSM	ENSG00000149308.17	ENST00000278612.9	6113	18	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_11	13.9104899304017	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGATTCATAGTTAACT	-13	True	NA	-6	True	AATAAA	-15	NA	108222638	108157214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_108159020_108160879_108162015_108162119_108162181_108169743_108169853_108169927_108170044_108172198_108173852_108176245_108176375_108176993_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
transcript_27363.nic	chr11	-	1157	11	ISM	ENSG00000149308.17	ENST00000278612.9	6113	18	-51	19778	-51	-5861	5prime_fragment	FALSE	canonical	3	48	junction_4	15.0096635538576	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAGACTATTTATTTCA	1281	False	NA	NA	False	NA	NA	NA	108222689	108176992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_108177091_108185231_108185320_108185402_108185495_108186481_108186570_108188097_108188180_108189105_108189331_108190459_108190501_108192117_108192191_108193956_108194018_108197301_108197421_108222499
transcript_27366.nnic	chr11	-	1044	2	NNC	ENSG00000149308.17	novel	6113	18	NA	NA	-240	-28482	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGATTATGACACTC	1092	False	NA	NA	False	AATAAA	-16	NA	108222878	108218941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_108219607_108222499
transcript_27372.nic	chr11	+	1664	5	ISM	ENSG00000149311.20	ENST00000527805.6	9287	61	-301	129221	-277	0	5prime_fragment	FALSE	canonical	3	29	junction_4	21.5754490103914	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGCAAGAGAGTTGAAAG	603	False	NA	NA	False	AAAAAG	-2	NA	108222766	108236552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177_108229324_108235669
transcript_27373.known	chr11	+	498	5	FSM	ENSG00000149311.20	ENST00000639240.1	498	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.5258244413097	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCGCGTGAGTTTTT	56	False	NA	4	True	AATAAA	-13	NA	108223173	108229363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108223187_108224783_108224872_108227598_108227697_108227775_108227889_108229177
transcript_27375.known	chr11	+	442	4	FSM	ENSG00000149311.20	ENST00000683914.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	8.73053390247253	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGTGAGTTTTTTTT	31	False	NA	7	True	AATAAA	-16	NA	108223148	108229366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177
transcript_27377.known	chr11	+	560	4	FSM	ENSG00000149311.20	ENST00000526567.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.8094638358646	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCGCGTGAGTTTTTT	10	False	NA	5	True	AATAAA	-14	NA	108223528	108229364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108223687_108227594_108227697_108227775_108227889_108229177
transcript_27379.known	chr11	-	477	3	FSM	ENSG00000166323.13	ENST00000526725.1	477	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGCCTCTAGGTTT	NA	False	NA	NA	False	AATAAA	-10	NA	108405528	108340158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_108340365_108393207_108393379_108405428
transcript_27380.known	chr11	-	1276	9	FSM	ENSG00000166323.13	ENST00000393084.6	1276	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4790199457749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTTCAGACTGATTATT	-16	True	NA	NA	False	AGTAAA	-21	NA	108467529	108382754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_108383176_108385919_108385976_108393207_108393379_108405428_108405560_108406762_108406964_108407095_108407150_108431745_108431839_108461478_108461569_108467470
transcript_27381.known	chr11	-	973	8	FSM	ENSG00000166323.13	ENST00000529391.5	973	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.55182578445717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATAGCCCTTTGAGCCTT	5944	False	NA	NA	False	TATAAA	-21	NA	108461569	108382999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_108383176_108385919_108385976_108393207_108393379_108405428_108405560_108406762_108406964_108407095_108407150_108431745_108431839_108461478
transcript_27383.known	chr11	-	10304	6	FSM	ENSG00000110723.12	ENST00000265843.9	10304	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.19089023002066	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTATTTGATTTGGTTT	-7	True	NA	-6	True	AATAAA	-14	NA	108593768	108505434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_108514876_108518234_108518374_108528135_108528185_108539023_108539187_108541651_108541813_108593417
transcript_27393.known	chr11	+	3217	18	FSM	ENSG00000178105.12	ENST00000322536.8	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_10	18.9887965512211	2422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATGTTTGCATTGTG	-11	True	NA	-79	True	AATAAA	-21	NA	108665068	108940927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314_108841477_108852152_108852210_108917872_108918019_108940245
transcript_27401.known	chr11	-	512	4	FSM	ENSG00000137710.17	ENST00000529774.1	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	29.6910012555245	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGGTTTATGACCTTTC	5353	False	NA	NA	False	NA	NA	NA	110258208	110253944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_110254110_110255288_110255386_110257766_110257914_110258105
transcript_27402.known	chr11	+	3144	4	FSM	ENSG00000137714.3	ENST00000260270.3	3144	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	31.6333157709821	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTGTATAAAGGTGAT	14	True	NA	NA	False	ATTAAA	-20	NA	110429947	110464884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_110430306_110435833_110435959_110456917_110457048_110462353
transcript_27407.known	chr11	-	508	2	FSM	ENSG00000271584.2	ENST00000603154.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATAATTTTGCATTTTG	20	False	NA	NA	False	AATAAA	-25	NA	111097357	111091931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111092312_111097229
transcript_27409.known	chr11	+	975	5	FSM	ENSG00000214290.9	ENST00000610738.6	1090	5	9	106	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.2736184954957	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTCATAGTTTAAATTTT	54	False	NA	-95	True	NA	NA	NA	111298554	111308629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111298589_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_27410.nnic	chr11	+	1170	5	NNC	ENSG00000214290.9	novel	1414	5	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	7.54983443527075	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	287	False	NA	11	True	AATAAA	-18	NA	111299220	111308735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_111299344_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_27411.nic	chr11	+	1199	5	ISM	ENSG00000214290.9	ENST00000638573.1	1080	6	1184	-106	6	0	3prime_fragment	FALSE	canonical	3	9	junction_1	5.40254569624358	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	429	False	NA	11	True	AATAAA	-18	NA	111299738	111308735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_111299891_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_27413.known	chr11	+	1332	5	FSM	ENSG00000214290.9	ENST00000526216.1	1332	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.2736184954957	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	423	False	NA	11	True	AATAAA	-18	NA	111299732	111308735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111300018_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_27417.known	chr11	-	5442	2	FSM	ENSG00000196167.10	ENST00000355430.4	5442	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGACTAAATTAACTT	-4	True	NA	NA	False	AATAAA	-19	NA	111299814	111293445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111298667_111299593
transcript_27420.known	chr11	+	733	6	FSM	ENSG00000183644.14	ENST00000375618.9	733	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.748331477354788	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTGAATATTTGTGTCT	-17	True	NA	30	True	AATAAA	-42	NA	111514777	111537043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111515011_111515510_111515553_111516039_111516111_111533745_111533806_111534411_111534465_111536769
transcript_27425.known	chr11	+	9622	15	FSM	ENSG00000170145.5	ENST00000304987.4	9622	15	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_6	7.38897413552857	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGGTGATGTGAATGTC	5	True	NA	16	True	AATAAA	-20	NA	111602448	111730855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111602699_111616242_111616360_111620338_111620403_111688000_111688163_111700885_111701011_111701451_111701576_111703202_111703424_111704986_111705140_111712210_111712376_111719774_111720004_111720477_111720763_111720898_111721063_111721829_111721941_111722664_111722757_111723495
transcript_27427.known	chr11	-	2082	16	FSM	ENSG00000137713.16	ENST00000311129.9	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	228.494259592373	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGAACGAAATTTTTACC	-5	True	NA	-5	True	AATAAA	-23	NA	111766382	111726907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_27428.nnic	chr11	-	1991	15	NIC	ENSG00000137713.16	novel	2082	16	NA	NA	-29	1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	180.347849831307	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGCCGAACGAAATTT	263	False	NA	-10	True	AATAAA	-18	NA	111766418	111726912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_111727058_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_27432.known	chr11	-	5553	15	FSM	ENSG00000137713.16	ENST00000527614.6	5553	15	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_9	65.7296953982206	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCAGGTCTTTCCTGTG	-12	True	NA	NA	False	NA	NA	NA	111766389	111737876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_27442.known	chr11	-	1953	14	FSM	ENSG00000137713.16	ENST00000341980.10	1953	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	176.604127220966	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGCATCCTCACTG	9	True	NA	33	True	NA	NA	NA	111766368	111741320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_27455.known	chr11	-	2294	15	FSM	ENSG00000137713.16	ENST00000534521.5	2294	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	240.579201180851	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGGAAGCTCAGGGT	9	True	NA	30	True	NA	NA	NA	111766368	111741054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111761118_111761292_111764804_111764906_111765293_111765385_111766247
transcript_27457.known	chr11	-	2345	15	FSM	ENSG00000086848.15	ENST00000398006.6	2345	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	23.1257652934592	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	2	True	NA	-12	True	AATAAA	-17	NA	111871301	111786283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_27459.known	chr11	-	2028	15	FSM	ENSG00000086848.15	ENST00000614444.4	2028	15	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_5	13.5217134525872	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTATTTCAAAGTCT	15	True	NA	16	True	AATAAA	-45	NA	111871533	111786255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_27460.known	chr11	-	1930	15	FSM	ENSG00000086848.15	ENST00000531154.5	1930	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	26.4505699950157	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	8563	False	NA	-12	True	AATAAA	-17	NA	111870865	111786283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_27462.known	chr11	-	6158	15	FSM	ENSG00000086848.15	ENST00000616540.5	6158	15	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_5	19.2937813815747	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCTTAATGTGA	-1	True	NA	-19	True	AATAAA	-15	NA	111871581	111782194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_27467.known	chr11	+	509	5	FSM	ENSG00000137720.8	ENST00000530799.5	509	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	63.0133914338849	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGAACTGGATCCTCC	42	False	NA	NA	False	NA	NA	NA	111879560	111883805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111879606_111881484_111881616_111882367_111882599_111883135_111883203_111883770
transcript_27468.known	chr11	-	2774	5	FSM	ENSG00000255561.7	ENST00000260257.9	2774	5	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	4.30116263352131	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGTCTGTTTGACTC	4	True	NA	NA	False	AATAAA	-20	NA	111879165	111874055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878555_111878713_111878960
transcript_27471.known	chr11	+	534	4	FSM	ENSG00000137720.8	ENST00000528125.5	534	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	58.8179866669674	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAGATCTTAATATTG	-13	True	NA	NA	False	NA	NA	NA	111878934	111883900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111879041_111882367_111882599_111883135_111883203_111883770
transcript_27472.known	chr11	+	2568	4	FSM	ENSG00000137720.8	ENST00000260276.8	2568	4	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_3	6.54896090146283	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCTGGGCTACTA	22	True	NA	NA	False	AATAAA	-14	NA	111879540	111885975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111879606_111882367_111882599_111883135_111883203_111883770
transcript_27474.known	chr11	-	2206	4	FSM	ENSG00000255561.7	ENST00000531487.1	2206	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	5.43650214343336	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGAGTCTTGCTCTGCCG	NA	False	NA	NA	False	NA	NA	NA	111879457	111874758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878960
transcript_27477.known	chr11	+	599	3	FSM	ENSG00000137720.8	ENST00000530214.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	54	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTATCCCTTTTTTT	23	True	NA	11	True	AATAAA	-22	NA	111879541	111884074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111879606_111882367_111882599_111883770
transcript_27478.known	chr11	-	276	1	FSM	ENSG00000176343.5	ENST00000494116.1	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCCTCTACTCTTTGAG	NA	False	NA	NA	False	NA	NA	NA	111889474	111889198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111889200_111889500
transcript_27479.known	chr11	+	1104	4	FSM	ENSG00000149300.10	ENST00000278601.6	1104	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	1.88561808316413	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGCGCGTTTTCTGGG	-12	True	NA	15	True	AATAAA	-15	NA	111918912	111926871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111919005_111924325_111924364_111925652_111925715_111925959
transcript_27480.known	chr11	+	882	4	FSM	ENSG00000149300.10	ENST00000527286.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.4986771653491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATTGTTGCTCCTGCTC	34	False	NA	NA	False	NA	NA	NA	111918996	111926478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111919260_111924325_111924364_111925652_111925715_111925959
transcript_27482.known	chr11	-	1107	4	FSM	ENSG00000109846.9	ENST00000527899.6	1107	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.10960933531265	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGTCTTGTGTTTG	NA	False	NA	-2	True	AATAAA	-16	NA	111913347	111908625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913104
transcript_27483.known	chr11	-	941	4	FSM	ENSG00000109846.9	ENST00000616970.5	941	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.16441400296898	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGTGTTTGAA	84	False	NA	0	True	AATAAA	-18	NA	111913213	111908623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913138
transcript_27484.known	chr11	-	887	4	FSM	ENSG00000109846.9	ENST00000527950.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.74165738677394	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTGTTTGAAT	16	False	NA	1	True	AATAAA	-19	NA	111923722	111908622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111923702
transcript_27485.known	chr11	-	774	3	FSM	ENSG00000109846.9	ENST00000650687.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTATGATTGCATTAT	-2	True	NA	60	True	AATAAA	-18	NA	111911770	111908563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111908968_111910326_111910450_111911523
transcript_27486.known	chr11	+	843	2	FSM	ENSG00000170276.6	ENST00000304298.4	843	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTACTGCTCCCTA	-5	True	NA	10	True	AATAAA	-16	NA	111912733	111914093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111912924_111913440
transcript_27488.nic	chr11	+	1205	7	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-165	40201	-165	6457	5prime_fragment	FALSE	canonical	3	29	junction_5	6.8414585839246	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAGGAAGCAAAGAAAATG	1	True	NA	NA	False	AAAAAG	-4	NA	111937177	111982452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875_111974984_111980736_111980850_111982338
transcript_27489.known	chr11	+	1945	6	FSM	ENSG00000150764.14	ENST00000529225.5	1945	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	20.0459472213213	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	2910	False	NA	NA	False	ATTAAA	-15	NA	111927143	111975995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111927388_111929817_111929911_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_27491.nic	chr11	+	1590	5	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-165	47058	-165	-400	5prime_fragment	FALSE	canonical	3	38	junction_2	4.43705983732471	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACTTTACTGGCTCATG	1	True	NA	NA	False	AATAAA	-24	NA	111937177	111975595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_27493.nic	chr11	+	1990	5	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-165	46658	-165	0	5prime_fragment	FALSE	canonical	3	38	junction_2	4.43705983732471	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	1	True	NA	NA	False	ATTAAA	-15	NA	111937177	111975995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_27495.known	chr11	+	4825	16	FSM	ENSG00000150764.14	ENST00000615255.1	4825	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	11.7681302205953	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	-23	True	NA	NA	False	NA	NA	NA	111977308	112021979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111977795_111980736_111980850_111982338_111982488_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
transcript_27496.known	chr11	+	3825	14	FSM	ENSG00000150768.17	ENST00000681316.1	3825	14	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_7	163.358247908587	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	1	True	NA	-4	True	AAAAAG	-44	NA	112025425	112064375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043471_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_275.known	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	8281	junction_1	0	10528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_8991_13672
transcript_27501.known	chr11	+	3871	14	FSM	ENSG00000150768.17	ENST00000681638.1	3871	14	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	170.982887825051	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTGGTTTAATTTTT	6	True	NA	10	True	ATTAAA	-14	NA	112025430	112064389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028977_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_27502.known	chr11	+	3723	13	FSM	ENSG00000150768.17	ENST00000681339.1	3723	13	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_9	168.31815113053	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	1	True	NA	-4	True	AAAAAG	-44	NA	112025425	112064375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_27505.known	chr11	+	3638	13	FSM	ENSG00000150768.17	ENST00000679368.1	3638	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	178.77614416421	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	6	True	NA	-4	True	AAAAAG	-44	NA	112025430	112064375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_27506.known	chr11	+	1931	12	FSM	ENSG00000150768.17	ENST00000531306.2	1931	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	186.64076955345	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACATAAAGGTGACCCT	6	True	NA	NA	False	NA	NA	NA	112025430	112062861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026283_112033488_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_27508.known	chr11	+	3517	12	FSM	ENSG00000150768.17	ENST00000393051.5	3517	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	184.253777560881	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGTTTAATTTTTG	15	True	NA	11	True	ATTAAA	-15	NA	112025439	112064390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_2751.known	chr1	-	2125	7	FSM	ENSG00000198746.13	ENST00000361720.10	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	15.7735714267745	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTTACTTTTCTAATT	-11	True	NA	-16	True	AATAAA	-17	NA	26900467	26890487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
transcript_27510.known	chr11	+	3552	12	FSM	ENSG00000150768.17	ENST00000680331.1	3552	12	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	184.402362796572	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTGGTTTAATTTTT	15	True	NA	10	True	ATTAAA	-14	NA	112025439	112064389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_27513.known	chr11	+	943	7	FSM	ENSG00000150776.18	ENST00000524989.1	943	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	36.4584999996191	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTGAGAGCTCAGAGGA	-3	True	NA	NA	False	NA	NA	NA	112074315	112082945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112074886_112074917_112075566_112075651_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_27517.known	chr11	+	2322	6	FSM	ENSG00000150776.18	ENST00000420986.6	2322	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	37.7655928061509	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGGTCTTGGTTCTG	NA	False	NA	9	True	AGTAAA	-16	NA	112074085	112084134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
transcript_27522.known	chr11	+	809	6	FSM	ENSG00000150776.18	ENST00000525785.5	809	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.3555886046519	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACACTAAGAAAACCAA	12	True	NA	NA	False	NA	NA	NA	112074330	112082822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_27523.known	chr11	-	1103	6	FSM	ENSG00000150773.12	ENST00000532211.5	1103	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	3.54400902933387	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGTAGTTTATCTTAA	264	False	NA	NA	False	ATTAAA	-21	NA	112073980	112067797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073929
transcript_27525.known	chr11	+	355	5	FSM	ENSG00000150776.18	ENST00000526879.5	355	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	34.9669486801465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAATAAAAAGTTCTAT	-3	True	NA	-23	True	AATGAA	-41	NA	112074315	112080512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112074886_112074917_112075566_112075644_112078214_112078316_112080408
transcript_27528.known	chr11	+	2246	4	FSM	ENSG00000150776.18	ENST00000530104.2	2246	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	35.9103822808329	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAAAGCTTCTATTTT	-9	True	NA	NA	False	ATTAAA	-18	NA	112074309	112082427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408
transcript_27533.known	chr11	+	2487	12	FSM	ENSG00000150768.17	ENST00000679614.1	2487	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	187.157599210261	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTGTGTCCTTCTACT	-17	True	NA	17	True	AGTAAA	-23	NA	112025407	112063616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025497_112028912_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_27534.known	chr11	-	1932	6	FSM	ENSG00000150773.12	ENST00000528775.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	3.86781592116274	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTACATCAAGTAGCTG	8	True	NA	NA	False	AATAAA	-16	NA	112074013	112063217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112064222_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073929
transcript_27535.known	chr11	-	1090	6	FSM	ENSG00000150773.12	ENST00000280350.10	1090	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.87054001888146	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGTAGTTTATCTTAA	4	True	NA	NA	False	ATTAAA	-21	NA	112074017	112067797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073979
transcript_27536.known	chr11	+	3686	6	FSM	ENSG00000150776.18	ENST00000393047.8	3686	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	5.74108003776293	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	-20	True	NA	9	True	AATAAA	-19	NA	112074298	112085150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_27537.known	chr11	+	3739	6	FSM	ENSG00000150776.18	ENST00000532163.5	3739	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32.2117990804612	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	NA	False	NA	9	True	AATAAA	-19	NA	112074286	112085150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074917_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_27538.known	chr11	-	805	2	FSM	ENSG00000150779.12	ENST00000541231.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	2090	junction_1	0	8781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	-1	False	NA	NA	False	AAGAAA	-14	NA	112086798	112084816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112085463_112086639
transcript_27539.known	chr11	-	741	3	FSM	ENSG00000150779.12	ENST00000507614.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	185	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGAAATTTATTTA	75	False	NA	-32	True	AGTAAA	-13	NA	112086722	112085148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112085463_112085966_112086311_112086639
transcript_27541.nnic	chr11	+	1347	6	NIC	ENSG00000255292.9	novel	566	6	NA	NA	-79	-6804	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	866.017921292625	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTGTATGAGTTGGCT	2006	False	NA	NA	False	AATAAA	-20	NA	112086823	112172556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_112086960_112087856_112087974_112088866_112089012_112170418_112170531_112170622_112170675_112171771
transcript_27547.known	chr11	+	790	3	FSM	ENSG00000204370.13	ENST00000525291.5	790	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAGACAGTGTTTAATT	0	True	NA	NA	False	AATAAA	-12	NA	112086898	112095388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112086960_112088866_112089012_112094804
transcript_27548.known	chr11	+	1339	4	FSM	ENSG00000204370.13	ENST00000375549.8	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	838.192234646816	10280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGCTATCAGTAGTT	1	True	NA	27	True	AATAAA	-35	NA	112086872	112095794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112094804
transcript_27549.known	chr11	+	1074	4	FSM	ENSG00000204370.13	ENST00000528021.6	1074	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	838.192234646816	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATAATGGCTTGGTT	1	True	NA	NA	False	AATAAA	-17	NA	112086872	112120016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112119291
transcript_2755.known	chr1	+	1792	9	FSM	ENSG00000090273.14	ENST00000321265.10	1792	9	0	0	0	0	multi-exon	TRUE	canonical	3	3016	junction_8	98.7142340293435	10486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTCTATGTATGTT	-12	True	NA	9	True	AATAAA	-14	NA	26921742	26946871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_27550.known	chr11	-	1115	6	FSM	ENSG00000150782.12	ENST00000280357.12	1115	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.748331477354788	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGAACTGTCTGAATT	-4	True	NA	NA	False	AATAAA	-29	NA	112164094	112143259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112143818_112148602_112148737_112150071_112150207_112153591_112153604_112154974_112155062_112163905
transcript_27563.known	chr11	+	872	6	FSM	ENSG00000150787.8	ENST00000280362.8	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_3	30.2191991952136	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGGAGACAATATATATA	35	True	NA	7	True	AATAAA	-18	NA	112226427	112233973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112226527_112228593_112228674_112230207_112230231_112230625_112230683_112233162_112233234_112233431
transcript_27564.known	chr11	+	625	4	FSM	ENSG00000150787.8	ENST00000525803.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	209.832208098651	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGGGATTATT	39	True	NA	27	True	ATTAAA	-22	NA	112226431	112233810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112226527_112228593_112228674_112233162_112233234_112233431
transcript_27566.nnic	chr11	+	744	3	FSM	ENSG00000250303.5	ENST00000689463.1	713	3	-28	-3	-19	0	multi-exon	FALSE	canonical	2	5	junction_2	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCCATCATTTCTGCCA	-43	True	NA	NA	False	AATAAA	-19	NA	112290244	112294119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112290510_112291319_112291406_112293726
transcript_27567.known	chr11	+	2191	3	FSM	ENSG00000250303.5	ENST00000529938.2	2191	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAATAAAATCATTACTGA	NA	False	NA	NA	False	AAAAAG	-35	NA	112290217	112294092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112290510_112291246_112292780_112293726
transcript_27568.known	chr11	+	3011	2	FSM	ENSG00000250303.5	ENST00000666993.1	3011	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGAGGTAATAAAATC	-24	True	NA	NA	False	AAAAAG	-27	NA	112290263	112294084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112290510_112291319
transcript_27569.known	chr11	+	697	2	FSM	ENSG00000250303.5	ENST00000532168.2	697	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGTGTAGGATGAATTC	9729	False	NA	2	True	AATAAA	-19	NA	112280485	112291776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112280726_112291319
transcript_27572.known	chr11	-	1934	3	FSM	ENSG00000247416.5	ENST00000500537.2	1934	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTTATCAGACTCTTT	NA	False	NA	NA	False	ATTAAA	-20	NA	112963460	112959278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112960852_112961366_112961477_112963209
transcript_27574.known	chr11	-	949	4	FSM	ENSG00000255129.7	ENST00000526487.6	949	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGGTCTGAAAACC	NA	False	NA	NA	False	NA	NA	NA	113314482	113278249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113278744_113279489_113279650_113280490_113280633_113314329
transcript_27579.known	chr11	-	517	3	FSM	ENSG00000255129.7	ENST00000533504.2	556	3	38	1	38	-1	multi-exon	FALSE	canonical	2	2	junction_2	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTCTGTGTTATTAT	9	True	NA	NA	False	AATAAA	-14	NA	113314437	113279382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113279650_113280490_113280633_113314329
transcript_2758.nnic	chr1	-	1921	5	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	33	-3	at_least_one_novel_splicesite	TRUE	canonical	3	32	junction_4	130.110529935129	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTATCTGCCTGCTT	9	True	NA	-18	True	NA	NA	NA	26960435	26949564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26953845_26953948_26960349
transcript_27581.known	chr11	+	2256	22	FSM	ENSG00000149292.17	ENST00000529221.6	2256	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.9354043622411	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	-4	True	NA	18	True	AATAAA	-18	NA	113314582	113366387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
transcript_27587.nic	chr11	+	1836	11	NIC	ENSG00000149292.17	novel	2256	22	NA	NA	0	-403	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	12.1741529479467	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGGTACTTCCCATAG	-4	True	NA	NA	False	AATAAA	-19	NA	113314582	113340330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_113314619_113315950_113316054_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285
transcript_27589.nic	chr11	+	1765	10	ISM	ENSG00000149292.17	ENST00000529221.6	2256	22	-32	26057	-28	-403	5prime_fragment	FALSE	canonical	3	12	junction_1	6.91214711777591	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTGGTACTTCCCATAG	0	True	NA	NA	False	AATAAA	-19	NA	113314550	113340330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285
transcript_27591.known	chr11	-	2873	16	FSM	ENSG00000086827.9	ENST00000200135.8	2873	16	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_9	28.9367125522809	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	21	True	NA	-5	True	AATAAA	-16	NA	113773692	113733186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_27598.known	chr11	-	1900	15	FSM	ENSG00000048028.11	ENST00000537706.5	1900	15	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_14	37.3849937154206	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTTGTTCTGTTTCTT	-10	True	NA	NA	False	AATAAA	-14	NA	113875528	113813754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_27600.nic	chr11	-	1703	8	ISM	ENSG00000048028.11	ENST00000537706.5	1900	15	-11	17333	-3	-205	5prime_fragment	FALSE	canonical	3	351	junction_7	38.072969682022	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTGTTACTTATTTAGA	-21	True	NA	0	True	AATAAA	-14	NA	113875539	113831087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_27602.nic	chr11	-	2106	7	ISM	ENSG00000048028.11	ENST00000542033.5	852	8	-6	1228	-3	-1228	5prime_fragment	FALSE	canonical	3	351	junction_6	39.3813266522205	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAGAAATGCTTTTA	-21	True	NA	NA	False	AAAAAG	-5	NA	113875539	113832110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_27605.known	chr11	-	4669	25	FSM	ENSG00000048028.11	ENST00000003302.8	4669	25	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	118.559342560312	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGCAGTATGGTC	-4	True	NA	-11	True	AATAAA	-15	NA	113875570	113797873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113806488_113806585_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_27606.known	chr11	-	3431	22	FSM	ENSG00000048028.11	ENST00000545540.5	3431	22	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_21	89.406686302287	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAGATTAGAAATATAAA	-4	True	NA	NA	False	AATACA	-26	NA	113875570	113798804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
transcript_27607.nnic	chr11	+	1553	9	NNC	ENSG00000166736.12	novel	2235	9	NA	NA	5	844	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	10.5326872164704	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACAGCCCAAAGACCATG	NA	False	NA	NA	False	AATAAA	-17	NA	113975079	113987755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113986729_113986824_113987047_113987586
transcript_27608.known	chr11	+	2205	9	FSM	ENSG00000166736.12	ENST00000504030.7	2205	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	6.68837611083587	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTCTTTTTTTTTTCT	0	True	NA	5	True	AATAAA	-19	NA	113975107	113990313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113986729_113986824_113987047_113989464
transcript_27609.known	chr11	+	8494	7	FSM	ENSG00000109906.15	ENST00000335953.9	8494	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.37436854187255	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGGTACGATTCCCT	-16	True	NA	NA	False	AATAAA	-15	NA	114059710	114256765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114059883_114063210_114064569_114156336_114156435_114186951_114187039_114242166_114242338_114247197_114247366_114250325
transcript_27612.known	chr11	+	880	7	FSM	ENSG00000076043.11	ENST00000544827.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	293.549920040111	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTATTGAAATGCAAACCT	588	False	NA	15	True	AATAAA	-22	NA	114440120	114450262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114440147_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_27614.known	chr11	+	664	6	FSM	ENSG00000076043.11	ENST00000539119.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	317.153338308144	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGTTAACTTGCATCTC	49	False	NA	NA	False	NA	NA	NA	114439581	114450062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_27618.known	chr11	+	539	4	FSM	ENSG00000076043.11	ENST00000543131.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	392.65789463886	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCTTCGGTTAACTTG	32	True	NA	NA	False	NA	NA	NA	114439510	114450056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114445978_114446088_114447825_114447880_114449845
transcript_27619.known	chr11	+	867	3	FSM	ENSG00000076053.12	ENST00000545678.1	867	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	334.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAGAAATTTCTT	11	True	NA	NA	False	GATAAA	-30	NA	114400673	114408123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114400768_114405705_114405800_114407444
transcript_2762.known	chr1	-	1855	4	FSM	ENSG00000175707.10	ENST00000320567.6	1855	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	58.6363558061227	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTGCCTGCTTTCT	-24	True	NA	-15	True	NA	NA	NA	26960468	26949561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26950152_26950681_26950757_26951341_26952413_26960349
transcript_27622.known	chr11	-	1980	1	FSM	ENSG00000180425.11	ENST00000623205.2	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	326	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTCCTAAGGAACT	41	False	114400529	NA	False	AATAAA	-19	NA	114400511	114398531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_114398500_114400500
transcript_27623.known	chr11	+	1080	7	FSM	ENSG00000076043.11	ENST00000265881.10	1080	7	0	0	0	0	multi-exon	TRUE	canonical	3	662	junction_4	79.7718970286877	7583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	-12	True	NA	32	True	AATAAA	-39	NA	114439466	114450279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_27624.known	chr11	+	1908	5	FSM	ENSG00000076053.12	ENST00000542140.5	1908	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	261.32678297488	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGTGTGTGTTATTTT	3	True	NA	6	True	TATAAA	-2	NA	114400665	114408909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114400768_114401697_114401861_114402831_114402916_114405705_114405800_114407444
transcript_27625.known	chr11	+	4243	5	FSM	ENSG00000076053.12	ENST00000540163.5	4243	5	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_3	144.987930532165	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGTACAAAATTCTCAA	NA	False	NA	NA	False	AATAAA	-18	NA	114400029	114410607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405708_114405800_114407444
transcript_27626.known	chr11	+	452	3	FSM	ENSG00000076043.11	ENST00000544196.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	343	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGTTTTTTTCTGTT	-13	True	NA	4	True	AATAAA	-16	NA	114439465	114441902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114441744
transcript_27627.known	chr11	+	710	3	FSM	ENSG00000076043.11	ENST00000539275.5	710	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	341.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	5	True	NA	32	True	AATAAA	-39	NA	114439483	114450279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114449845
transcript_27628.known	chr11	+	449	5	FSM	ENSG00000076043.11	ENST00000538198.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	340.78915769138	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATGAAAAGAAGAGGAAAA	13	True	NA	NA	False	AAGAAA	-6	NA	114439545	114449917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114445978_114446088_114447825_114447880_114449845
transcript_27629.known	chr11	+	726	5	FSM	ENSG00000076043.11	ENST00000546316.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	349.323990015	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTATTGAAATGCAAACC	1138	False	NA	14	True	AATAAA	-21	NA	114440670	114450261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114440740_114443855_114443934_114445978_114446088_114447825_114447880_114449845
transcript_2763.known	chr1	-	2382	2	FSM	ENSG00000158246.8	ENST00000289166.6	2382	2	0	0	0	0	multi-exon	TRUE	canonical	3	1162	junction_1	0	911	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTAGTGCCATGCTTCCTC	5	True	NA	-12	True	AATAAA	-17	NA	27012850	27005019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27006958_27012406
transcript_27630.known	chr11	+	753	5	FSM	ENSG00000076043.11	ENST00000538403.5	753	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	353.18691935008	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAAATGCAAACCTTTT	4622	False	NA	18	True	AATAAA	-25	NA	114444154	114450265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114444213_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_27631.known	chr11	+	475	5	FSM	ENSG00000076043.11	ENST00000541703.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	330.980645204519	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACCAAAGAAGGCTGCTT	20	True	NA	NA	False	NA	NA	NA	114439498	114447852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114445978_114446088_114447825
transcript_27632.known	chr11	-	575	2	FSM	ENSG00000182985.18	ENST00000536781.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTACGTATCAGATTGT	0	True	NA	NA	False	NA	NA	NA	115504415	115399083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_115399514_115504270
transcript_27634.nnic	chr11	-	2524	11	NNC	ENSG00000137656.12	novel	2192	10	NA	NA	-213	0	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_1	51.3759671441813	229	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTAACTGGGTATTCT	NA	False	NA	-7	True	AATAAA	-25	NA	116773200	116748169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_116748576_116756227_116756344_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_27639.known	chr11	-	2192	10	FSM	ENSG00000137656.12	ENST00000260210.5	2192	10	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_6	18.0315224667563	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCTTAACTGGGTAT	0	True	NA	-10	True	AATAAA	-22	NA	116772987	116748172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_2764.known	chr1	-	4737	12	FSM	ENSG00000090020.11	ENST00000263980.8	4737	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	8.57441899821934	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAAGGGCTGCTTTCTGGG	1	True	NA	NA	False	AATAAA	-22	NA	27155125	27098808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27100645_27101202_27101276_27101724_27101827_27102015_27102131_27102384_27102559_27102672_27102744_27103222_27103313_27105884_27106088_27107647_27107866_27109526_27109778_27113825_27114287_27153982
transcript_27643.known	chr11	-	6539	14	FSM	ENSG00000109917.11	ENST00000227322.8	6539	14	0	0	0	0	multi-exon	TRUE	canonical	3	537	junction_3	37.5531181979677	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGTTAGAATTCATT	-10	True	NA	3	True	AATAAA	-22	NA	116788023	116773798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116779060_116779771_116779838_116782157_116782245_116782918_116783030_116783529_116783620_116784377_116784449_116784854_116784922_116785098_116785147_116785513_116785637_116785795_116785883_116786510_116786582_116786968_116787060_116787481_116787644_116787819
transcript_27644.known	chr11	-	1471	3	FSM	ENSG00000110244.7	ENST00000357780.5	1471	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGCCGGATGAATCCT	-1	True	NA	NA	False	AATAAA	-23	NA	116823304	116820699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116821882_116822658_116822786_116823142
transcript_27646.known	chr11	-	932	4	FSM	ENSG00000118137.10	ENST00000359492.6	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	221.460304945755	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	48	False	NA	-1	True	AATAAA	-18	NA	116837609	116835750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837558
transcript_27647.known	chr11	-	927	2	FSM	ENSG00000118137.10	ENST00000375329.6	927	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	47	False	NA	-1	True	AATAAA	-18	NA	116837610	116835750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116836412_116837344
transcript_27648.known	chr11	-	899	4	FSM	ENSG00000118137.10	ENST00000236850.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	96.2439031258027	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	0	True	NA	-1	True	AATAAA	-18	NA	116837622	116835750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837604
transcript_27649.known	chr11	-	1088	3	FSM	ENSG00000118137.10	ENST00000375323.5	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	9.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	8	True	NA	-1	True	AATAAA	-18	NA	116837614	116835750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116836412_116837000_116837158_116837344
transcript_2765.known	chr1	-	660	2	FSM	ENSG00000090020.11	ENST00000490329.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGTCAAGGGCTGCT	NA	False	NA	NA	False	AATAAA	-15	NA	27099682	27098815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27099005_27099211
transcript_27650.known	chr11	-	940	4	FSM	ENSG00000118137.10	ENST00000375320.5	940	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	224.287018497876	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	71	False	NA	-1	True	AATAAA	-18	NA	116837586	116835750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837527
transcript_27652.known	chr11	+	4175	6	FSM	ENSG00000168092.14	ENST00000527958.6	4175	6	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_5	15.2262930485394	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGTGTCTTTCTGTC	-3	True	NA	28	True	TATAAA	-19	NA	117144286	117171045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117167420
transcript_27655.known	chr11	+	1056	6	FSM	ENSG00000168092.14	ENST00000529887.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	88.8783438189529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTTCATTGGAACAAGG	8	True	NA	NA	False	AGTAAA	-27	NA	117144297	117176422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117175905
transcript_27661.known	chr11	+	833	7	FSM	ENSG00000149577.16	ENST00000529484.5	833	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	4.63381292481928	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAAATTAGCC	392	False	NA	NA	False	AATAAA	-5	NA	117190682	117194151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117190741_117191877_117192015_117192253_117192363_117192573_117192651_117192819_117192867_117193152_117193259_117193852
transcript_27662.known	chr11	-	4197	17	FSM	ENSG00000160613.15	ENST00000320934.8	4197	17	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_16	21.6440486912685	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTAGCCTGTCATGCCG	5	True	NA	NA	False	NA	NA	NA	117232073	117204336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117206357_117206680_117206799_117207066_117207161_117207969_117208065_117208896_117209054_117218465_117218569_117219056_117219165_117219590_117219759_117223207_117223309_117224077_117224217_117224700_117224756_117225930_117226022_117227156_117227323_117228215_117228351_117229376_117229857_117230348_117230469_117232026
transcript_27665.known	chr11	+	1048	6	FSM	ENSG00000149591.17	ENST00000525531.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	614.659450427633	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTTACCCGAAAGCATC	9	False	NA	NA	False	NA	NA	NA	117199381	117204541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117199433_117199632_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_27668.known	chr11	+	1477	5	FSM	ENSG00000149591.17	ENST00000278968.10	1477	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	537.758019466005	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTCAGGCCTGGCTG	21	False	NA	8	True	NA	NA	NA	117199393	117204782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_2767.known	chr1	+	1665	7	FSM	ENSG00000186501.15	ENST00000464720.5	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	101.020487471052	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	-24	True	NA	27	True	AATAAA	-15	NA	27322246	27336400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_27670.known	chr11	+	3786	5	FSM	ENSG00000149591.17	ENST00000392951.9	3786	5	0	0	0	0	multi-exon	FALSE	canonical	3	1162	junction_1	53.8348168010257	5531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTAGAGAATACCTAA	-3	True	NA	NA	False	ATTAAA	-18	NA	117199369	117207464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117199433_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_27679.known	chr11	+	3477	15	FSM	ENSG00000167257.11	ENST00000300650.9	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	12.0384163986695	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTAACTTTTTAAAAAAA	10	True	NA	NA	False	ATTAAA	-15	NA	117232670	117286454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_2768.known	chr1	+	986	7	FSM	ENSG00000186501.15	ENST00000478104.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	110.46216043917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTCAAGGTGGCCC	14	True	NA	NA	False	NA	NA	NA	27322284	27335824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_27682.known	chr11	+	2695	15	FSM	ENSG00000167257.11	ENST00000531452.5	2695	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	21.2954196474074	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTAGTTTGACTTCTT	5	False	NA	24	True	GATAAA	-31	NA	117232735	117285688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117232776_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_2769.known	chr1	+	1511	6	FSM	ENSG00000186501.15	ENST00000608611.5	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	17.0364315512375	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	-23	True	NA	27	True	AATAAA	-15	NA	27322247	27336400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_277.known	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	226	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4001_+_0_4000
transcript_2770.known	chr1	+	368	4	FSM	ENSG00000186501.15	ENST00000466759.5	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	105.834251964517	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCTATTGCTGGTTTG	-17	True	NA	NA	False	AATAAA	-16	NA	27322253	27332559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27332446
transcript_27701.nic	chr11	+	927	6	ISM	ENSG00000167257.11	ENST00000300650.9	3477	15	-14	39614	-14	0	5prime_fragment	FALSE	canonical	3	46	junction_1	15.7149610244506	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCGGGAAGAAACAAAGA	-4	True	NA	-18	True	ATTAAA	-22	NA	117232656	117246840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808
transcript_27702.nic	chr11	+	1099	6	ISM	ENSG00000167257.11	ENST00000300650.9	3477	15	-14	39442	-14	172	5prime_fragment	FALSE	canonical	3	46	junction_1	15.7149610244506	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTAGTTTCTTTCC	-4	True	NA	33	True	AATAAA	-44	NA	117232656	117247012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808
transcript_27715.known	chr11	+	585	5	FSM	ENSG00000110274.16	ENST00000527609.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	11.6270159542335	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGAGACCCCCCCAAA	224	False	NA	NA	False	AAAAAG	-17	NA	117328084	117351959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117328209_117335604_117335681_117338565_117338669_117344165_117344278_117351789
transcript_27726.nic	chr11	+	715	4	ISM	ENSG00000110274.16	ENST00000525416.5	778	5	-94	10003	-15	0	5prime_fragment	FALSE	canonical	1	1	junction_2	16.9967317119759	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAGACAAGAAGG	-26	True	NA	NA	False	AAGAAA	-9	NA	117327834	117351942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_117328209_117335604_117335681_117344165_117344278_117351789
transcript_27727.known	chr11	+	492	4	FSM	ENSG00000110274.16	ENST00000533570.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	13.7194104181711	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGAGACCCCCCCAAAA	242	False	NA	NA	False	AAAAAG	-18	NA	117328102	117351960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117328209_117338565_117338669_117344165_117344278_117351789
transcript_27733.known	chr11	+	548	3	FSM	ENSG00000167257.11	ENST00000534428.5	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	7	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGCTCTGAAGAGAAAT	-36	True	NA	NA	False	NA	NA	NA	117232624	117238933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117232727_117234266_117234380_117238600
transcript_27734.known	chr11	-	583	3	FSM	ENSG00000177103.15	ENST00000525836.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTCCATCATCCCAGGT	7345	False	NA	NA	False	NA	NA	NA	117817525	117776808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117776938_117780492_117780811_117817389
transcript_27735.known	chr11	-	579	9	FSM	ENSG00000137726.17	ENST00000530956.6	579	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	191.328537795594	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACAGCCCTTTCCCCA	-1	True	NA	NA	False	AAGAAA	-12	NA	117876689	117838207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117844109_117844207_117876591
transcript_27739.known	chr11	-	991	6	FSM	ENSG00000137731.14	ENST00000534383.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.49857113690718	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACCTGCCTGCCTGTCT	-2	True	NA	-10	True	AATAAA	-25	NA	117824744	117820146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117824161
transcript_27745.known	chr11	-	1678	8	FSM	ENSG00000137726.17	ENST00000526014.6	1678	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_7	44.0903525011251	1756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCGGAGGTGCTTTCC	-18	True	NA	-9	True	AATAAA	-18	NA	117876658	117836980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_27746.known	chr11	-	2592	9	FSM	ENSG00000137747.16	ENST00000526090.1	2592	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.31695671910659	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCAGAGCAGTTAGATC	NA	False	NA	NA	False	NA	NA	NA	117929459	117907453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117908785_117909805_117909969_117910706_117910751_117911767_117911861_117913776_117913907_117914391_117914515_117917169_117917275_117918408_117918839_117929286
transcript_27749.nic	chr11	-	775	3	ISM	ENSG00000177098.9	ENST00000324727.9	4487	5	-78	10372	-13	-2543	5prime_fragment	FALSE	canonical	2	10	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCGTGTTGGTGTTTTC	-2	True	NA	NA	False	NA	NA	NA	118152901	118143748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_118144062_118145056_118145230_118152612
transcript_27750.known	chr11	-	1959	9	FSM	ENSG00000160593.19	ENST00000292067.11	1959	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.36358901432946	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGCACATTATTTCTA	3683	False	NA	-8	True	GATAAA	-18	NA	118213359	118193962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118194418_118196734_118196822_118197997_118198092_118200473_118200613_118203427_118203666_118205881_118205992_118210486_118210713_118212406_118212562_118212904
transcript_27757.known	chr11	-	591	4	FSM	ENSG00000160593.19	ENST00000524477.5	591	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTGAAACACGTGACCA	4157	False	NA	NA	False	NA	NA	NA	118212885	118205936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118205992_118210486_118210713_118212406_118212562_118212730
transcript_27760.known	chr11	-	3983	6	FSM	ENSG00000160588.10	ENST00000278949.9	3983	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.28952211790544	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGGTGTGTGCATATC	-37	True	NA	-5	True	AATAAA	-22	NA	118252365	118226689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118237049_118237261_118240210_118240378_118252221
transcript_27761.known	chr11	-	2622	6	FSM	ENSG00000149573.9	ENST00000278937.7	2622	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.78273291792038	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTATATACATATCTA	12	True	NA	2	True	AATAAA	-33	NA	118264297	118253415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118255234_118257237_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_27765.known	chr11	-	1370	5	FSM	ENSG00000149573.9	ENST00000438295.2	1370	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.96865172858795	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTATCTGCTTATTCT	NA	False	NA	-4	True	AATAAA	-37	NA	118264536	118256910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_27768.known	chr11	-	1531	4	FSM	ENSG00000149573.9	ENST00000529376.5	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.31245915016974	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATGCTGCTATAAACAT	26	True	NA	NA	False	NA	NA	NA	118264283	118259236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118260202_118262437_118262649_118262930_118263098_118264095
transcript_27769.known	chr11	+	1361	9	FSM	ENSG00000198851.10	ENST00000361763.9	1361	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.484122918275927	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGCTGTCCCTGTTTTC	-9	True	NA	NA	False	AATAAA	-17	NA	118304729	118316173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118304777_118304893_118305002_118307287_118307309_118308426_118308442_118312152_118312171_118312617_118312867_118313706_118313875_118314447_118314495_118315485
transcript_27770.known	chr11	-	701	5	FSM	ENSG00000167286.10	ENST00000300692.9	701	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGCCTGGGCTTCTTA	1	True	NA	NA	False	AATAAA	-19	NA	118342705	118339074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118339228_118339450_118339495_118339774_118339907_118340374_118340594_118342552
transcript_27771.known	chr11	-	1819	13	FSM	ENSG00000118096.10	ENST00000264020.6	1819	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	24.2498568151557	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-6	True	NA	NA	False	AGTAAA	-17	NA	118566035	118544542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118557737_118557891_118559784_118559865_118564964_118565062_118565789
transcript_27773.known	chr11	-	1562	12	FSM	ENSG00000118096.10	ENST00000264021.8	1562	12	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_9	9.78022967838606	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-11	True	NA	NA	False	AGTAAA	-17	NA	118565931	118544542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784_118559865_118564964_118565062_118565789
transcript_27776.known	chr11	+	3994	10	FSM	ENSG00000095139.15	ENST00000264028.5	3994	10	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_3	89.8356524128614	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTGTGAGAGTATTCA	1	True	NA	23	True	ATTAAA	-30	NA	118572408	118603033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118572551_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_27779.known	chr11	+	2420	9	FSM	ENSG00000149582.16	ENST00000313236.10	2420	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	19.4036079119323	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATATCTCTGCTTCAT	-5	True	NA	15	True	AATAAA	-15	NA	118531191	118535829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_27780.known	chr11	+	1456	9	FSM	ENSG00000149582.16	ENST00000354284.8	1456	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	17.7182815193799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAAAAAAGGAAGGAAG	2	True	NA	NA	False	NA	NA	NA	118531198	118546484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118546118
transcript_27788.known	chr11	+	1709	9	FSM	ENSG00000095139.15	ENST00000392859.7	1709	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	357.988041001372	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAGTTAAATACCTCCT	-18	True	NA	NA	False	NA	NA	NA	118572389	118600993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118572551_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_27790.known	chr11	+	2395	8	FSM	ENSG00000149582.16	ENST00000359862.8	2395	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.1573309531525	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCTCTGCTTCATTTC	83	False	NA	18	True	AATAAA	-18	NA	118531087	118535832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_27791.known	chr11	+	2228	8	FSM	ENSG00000149582.16	ENST00000442938.6	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	24.0586019238569	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGATAAGTGTTATCA	83	False	NA	NA	False	AATAAA	-13	NA	118531087	118547280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118546118
transcript_278.known	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	209	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4002_+_0_4000
transcript_27811.known	chr11	+	575	5	FSM	ENSG00000167283.9	ENST00000529770.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	3093.62756323382	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	-2	True	NA	88	True	AATAAA	-17	NA	118401618	118409199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118403923_118403986_118405656_118405710_118406936_118407098_118408999
transcript_27813.known	chr11	+	936	5	FSM	ENSG00000149582.16	ENST00000529001.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	16.5075740192192	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGAACCAGTCATCTCT	5	True	NA	NA	False	NA	NA	NA	118531201	118533622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419
transcript_27818.known	chr11	+	900	4	FSM	ENSG00000167283.9	ENST00000529790.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	3357.44466323224	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTAGAGTACTTGT	4	True	NA	NA	False	NA	NA	NA	118401609	118409577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118405656_118405710_118406936_118407098_118408999
transcript_27820.known	chr11	+	4320	10	FSM	ENSG00000118058.24	ENST00000531904.6	4320	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.98970309864158	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGGTGTTCAGTGATCA	23	False	NA	NA	False	NA	NA	NA	118436509	118484314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118436945_118439023_118439123_118468774_118468845_118471661_118474316_118476804_118476983_118477966_118478202_118480173_118480239_118481714_118482093_118482421_118482496_118484182
transcript_27829.known	chr11	+	2572	2	FSM	ENSG00000118058.24	ENST00000529852.3	2860	2	288	0	-188	0	multi-exon	FALSE	canonical	3	21	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTTAATTTT	257	False	NA	NA	False	AATAAA	-23	NA	118436743	118449995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118436945_118447624
transcript_27830.known	chr11	+	520	2	ISM	ENSG00000118058.24	ENST00000649666.2	2951	3	2570	1940	1842	-1929	3prime_fragment	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCAATAATTACTTTCCA	2547	False	NA	NA	False	AATAAA	-18	NA	118439033	118448055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_118439123_118447624
transcript_27831.known	chr11	+	8635	4	FSM	ENSG00000118058.24	ENST00000528278.2	8635	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	4.32049379893857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAGTGACCCAAAAAA	NA	False	NA	NA	False	NA	NA	NA	118495190	118505185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118498074_118498369_118501148_118501671_118501858_118502397
transcript_27833.known	chr11	-	477	2	FSM	ENSG00000254873.1	ENST00000534438.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAGTGTGATATCAAAT	7171	False	NA	NA	False	AATAAA	-14	NA	118401895	118398905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118399062_118401574
transcript_27834.known	chr11	+	6088	20	FSM	ENSG00000110344.10	ENST00000252108.8	6088	20	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_11	27.3358105311718	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTTATCACTTTATTC	-10	True	NA	15	True	AATAAA	-19	NA	118359599	118399211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118359675_118365039_118365202_118368630_118368805_118369422_118369536_118371513_118371667_118372506_118372667_118373085_118373289_118373493_118373686_118374895_118375230_118376573_118376695_118379445_118379751_118381390_118381524_118382588_118382777_118384634_118384736_118384831_118384946_118386437_118386613_118389724_118389906_118390656_118390805_118392737_118392896_118396313
transcript_27835.known	chr11	+	457	3	FSM	ENSG00000167283.9	ENST00000529460.1	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3590.5	11876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	12	False	NA	88	True	AATAAA	-17	NA	118401632	118409199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401729_118406936_118407098_118408999
transcript_27836.known	chr11	+	2222	3	FSM	ENSG00000285827.1	ENST00000649464.1	2222	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3321.5	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	-4	True	NA	NA	False	NA	NA	NA	118401601	118449569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118406936_118407098_118447624
transcript_27837.known	chr11	+	336	3	FSM	ENSG00000167283.9	ENST00000533172.5	336	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	3314	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	1	True	NA	88	True	AATAAA	-17	NA	118401621	118409199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118406936_118406977_118408999
transcript_27838.known	chr11	+	573	4	FSM	ENSG00000149582.16	ENST00000528373.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	24.7161665492222	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACCAAAGGTAGGCCAG	-5	True	NA	NA	False	NA	NA	NA	118531191	118533540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118533419
transcript_27839.known	chr11	-	1566	12	FSM	ENSG00000118096.10	ENST00000530872.5	1566	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.7935042007815	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCTTTCATTCGTAAA	3	True	NA	NA	False	NA	NA	NA	118565917	118544591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118545012_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118557737_118557891_118559784_118559865_118564964_118565062_118565789
transcript_27840.known	chr11	-	481	4	FSM	ENSG00000118096.10	ENST00000530185.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.003967972811	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGACGATGATGATGAT	18	True	NA	NA	False	GGGGCT	-13	NA	118566011	118556993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118557046_118559784_118559865_118564964_118565092_118565789
transcript_27841.nic	chr11	+	3026	13	NIC	ENSG00000019144.20	novel	3128	15	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	44.8431680662977	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	1913	False	NA	40	True	AATAAA	-15	NA	118634920	118658025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_118635164_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_27842.known	chr11	+	3128	15	FSM	ENSG00000019144.20	ENST00000534140.2	3128	15	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_2	62.1167432816496	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	1929	False	NA	40	True	AATAAA	-15	NA	118631975	118658025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118632054_118632158_118632297_118634922_118635052_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_27848.nic	chr11	+	566	2	ISM	ENSG00000019144.20	ENST00000527500.5	483	4	-103	3522	-57	-3522	5prime_fragment	FALSE	canonical	3	53	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGATGTGATTGTAAT	1913	False	NA	NA	False	ATTAAA	-16	NA	118634920	118635715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_118635164_118635392
transcript_27850.nnic	chr11	+	412	2	NNC	ENSG00000019144.20	novel	483	4	NA	NA	129	-3522	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGATGTGATTGTAAT	20	False	NA	NA	False	ATTAAA	-16	NA	118635157	118635715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_118635247_118635392
transcript_27854.known	chr11	-	6128	14	FSM	ENSG00000110367.14	ENST00000534980.7	6128	14	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	37.0002398840776	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGGTATGTCCTT	-16	True	NA	-4	True	AATAAA	-20	NA	118791164	118747762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118791097
transcript_27858.known	chr11	-	6152	14	FSM	ENSG00000110367.14	ENST00000620157.4	6152	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	105.445911427074	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTATGTC	-7	True	NA	-7	True	AATAAA	-17	NA	118790948	118747765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_27867.known	chr11	-	1936	13	FSM	ENSG00000110367.14	ENST00000526070.2	1936	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	108.503840177817	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-7	True	NA	NA	False	AATAAA	-13	NA	118790948	118754588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_27868.nnic	chr11	-	1946	13	NNC	ENSG00000110367.14	novel	1936	13	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_12	96.5480234563781	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-12	True	NA	NA	False	AATAAA	-13	NA	118790990	118754588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_2788.nnic	chr1	+	538	2	NIC	ENSG00000142765.18	novel	793	4	NA	NA	168	0	intron_retention	FALSE	canonical	3	24	junction_1	0	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGTCTGCTGGGGCA	6429	False	NA	NA	False	AATAAA	-23	NA	27351242	27353937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_27351556_27353712
transcript_27885.nnic	chr11	+	1019	2	Antisense	novelGene_ENSG00000110367.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_1	0	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATTGTGCAAGTCAAG	NA	False	NA	5	True	AATAAA	-14	NA	118719807	118754936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_118720348_118754457
transcript_27888.nnic	chr11	-	1386	2	NNC	ENSG00000287238.1	novel	1286	2	NA	NA	8214	4034	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTT	NA	False	NA	0	True	ATTAAA	-21	NA	118721198	118717069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_118717450_118720192
transcript_27889.known	chr11	-	1286	2	FSM	ENSG00000287238.1	ENST00000664961.1	1286	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	NA	False	NA	NA	False	NA	NA	NA	118729412	118721103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118722076_118729098
transcript_27891.known	chr11	-	738	2	FSM	ENSG00000110367.14	ENST00000533239.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTTTGTATAAATGGTT	-1	True	NA	NA	False	NA	NA	NA	118791149	118785832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118786519_118791097
transcript_27898.known	chr11	+	1884	1	FSM	ENSG00000278376.1	ENST00000610705.1	1884	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTCGTTATTTCTA	1	True	NA	5	True	AGTAAA	-14	NA	118791253	118793137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118791300_118793100
transcript_279.known	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	333	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4003_+_0_4000
transcript_27904.known	chr11	+	934	5	FSM	ENSG00000110375.3	ENST00000264031.3	934	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.62916512459885	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTTCCCTTTAGTGG	1	True	NA	9	True	AATAAA	-21	NA	118956297	118958559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118956427_118956882_118957015_118957207_118957347_118957597_118957669_118958096
transcript_27908.nnic	chr11	+	866	3	NIC	ENSG00000110375.3	novel	958	6	NA	NA	-204	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	4	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTTCCCTTTAGTGG	496	False	NA	9	True	AATAAA	-21	NA	118924959	118958559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_118925292_118957597_118957669_118958096
transcript_2791.known	chr1	-	946	6	FSM	ENSG00000174950.11	ENST00000374030.3	946	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.31058907144937	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-1	True	NA	-4	True	AATAAA	-17	NA	27383333	27379175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27379510_27380050_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_27911.known	chr11	-	1359	2	FSM	ENSG00000255121.2	ENST00000526453.1	1359	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACACCACCAAGTTAAAG	-10	True	NA	NA	False	NA	NA	NA	118998004	118996194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118997277_118997727
transcript_27918.known	chr11	+	1295	11	FSM	ENSG00000186166.9	ENST00000526463.5	1295	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	103.16297785543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCCTATTATACCTTC	-3	True	NA	-77	True	NA	NA	NA	118998154	119015641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119001612_119001826_119010763_119010831_119011220_119011312_119011938_119012004_119012148_119012255_119014993_119015084_119015306_119015440_119015537
transcript_2792.known	chr1	-	1457	5	FSM	ENSG00000174950.11	ENST00000374027.7	1457	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.56195171219375	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	29	False	NA	-4	True	AATAAA	-17	NA	27383303	27379175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_27921.known	chr11	+	1254	11	FSM	ENSG00000186166.9	ENST00000334418.6	1254	11	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	68.1073417481552	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTATCTACCTCCTAC	-20	True	NA	6	True	ATTAAA	-18	NA	118998137	119015793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011284_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
transcript_2793.known	chr1	+	2137	2	FSM	ENSG00000181773.7	ENST00000374024.4	2137	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTATGTGTGTG	-4	True	NA	NA	False	AATAAA	-19	NA	27392621	27395814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27392738_27393793
transcript_27943.known	chr11	+	588	3	FSM	ENSG00000186166.9	ENST00000534656.2	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	15	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGGGATAGGATTTAGC	17	True	NA	NA	False	NA	NA	NA	118998174	118999291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118998318_118998429_118998594_118999010
transcript_27944.known	chr11	-	483	5	FSM	ENSG00000118181.11	ENST00000527673.2	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	8537	junction_1	4545.01470707191	58067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAATGAGTATGTCT	-2	True	NA	-15	True	AATAAA	-12	NA	119018343	119015716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017957_119018054_119018281
transcript_27945.known	chr11	-	711	5	FSM	ENSG00000118181.11	ENST00000527791.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_3	7512.68984369114	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-23	True	NA	-10	True	AATAAA	-17	NA	119018678	119015711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017434_119017957_119018054_119018281
transcript_27946.known	chr11	-	508	5	FSM	ENSG00000118181.11	ENST00000532567.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	7693.60458432847	4237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	8776	False	NA	-10	True	AATAAA	-17	NA	119018330	119015711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017924_119018054_119018281
transcript_27947.known	chr11	-	1462	3	FSM	ENSG00000118181.11	ENST00000527853.1	1462	3	0	0	0	0	multi-exon	FALSE	canonical	3	8537	junction_1	6386	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTAAATCAAATGAATG	-36	True	NA	-24	True	AATAAA	-3	NA	119018691	119015725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119015759_119015840_119015940_119017361
transcript_27949.known	chr11	-	2102	10	FSM	ENSG00000137700.18	ENST00000330775.9	2102	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	100.873346820483	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-26	True	NA	-2	True	ATTAAA	-22	NA	119030906	119024350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030848
transcript_2795.known	chr1	-	5681	9	FSM	ENSG00000158195.11	ENST00000618852.5	5681	9	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	42.537483470464	452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTGGTGTTTGTGG	-14	True	NA	-6	True	GATAAA	-18	NA	27490167	27404229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27408347_27409691_27410207_27412571_27412728_27414832_27414964_27415984_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_27952.known	chr11	-	1912	9	FSM	ENSG00000137700.18	ENST00000638360.1	1912	9	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	102.30950285775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAGTTGGATATAGGTGG	-10	True	NA	-75	True	NA	NA	NA	119030890	119024423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027771_119028193_119028427_119029221_119029565_119030848
transcript_27955.known	chr11	-	2040	9	FSM	ENSG00000137700.18	ENST00000527992.5	2040	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	70.7149869193228	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAGAAGATTAAAACTA	0	True	NA	-39	True	AAGAAA	-10	NA	119030880	119024387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030848
transcript_2796.nnic	chr1	+	588	2	NNC	ENSG00000237429.1	novel	283	2	NA	NA	-72	159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGATTAATTTTTGGAT	123	False	NA	NA	False	ATTAAA	-16	NA	27525732	27530720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_27525886_27530285
transcript_27967.known	chr11	+	654	3	FSM	ENSG00000196655.12	ENST00000525303.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	524.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATTCCTTTGATCT	-6	True	NA	3	True	CATAAA	-7	NA	119018765	119023642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119018971_119021759_119021887_119023320
transcript_27968.known	chr11	+	817	4	FSM	ENSG00000196655.12	ENST00000533012.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	502.260888383716	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTTTGCAATCTGT	23	True	NA	20	True	AATAAA	-12	NA	119018794	119023659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119018971_119019142_119019318_119021759_119021887_119023320
transcript_27969.known	chr11	+	849	5	FSM	ENSG00000196655.12	ENST00000359005.8	849	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	450.206896881867	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCTTAATCGATGGT	-6	True	NA	33	True	AATAAA	-25	NA	119018765	119023672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119018971_119019142_119019318_119020149_119020254_119021873_119021887_119023320
transcript_27970.known	chr11	+	794	5	FSM	ENSG00000196655.12	ENST00000434101.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	452.698851334969	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCAATCTGTCTTAAT	-6	True	NA	26	True	AATAAA	-18	NA	119018765	119023665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119018971_119019142_119019211_119020204_119020254_119021759_119021887_119023320
transcript_27971.known	chr11	-	2032	11	FSM	ENSG00000137700.18	ENST00000538950.5	2032	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	125.517488821279	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	-26	True	NA	-2	True	ATTAAA	-22	NA	119030906	119024350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119028734_119028835_119029391_119029565_119030848
transcript_27972.known	chr11	-	4598	26	FSM	ENSG00000149428.20	ENST00000617285.5	4598	26	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_25	157.510055552019	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-7	True	NA	-6	True	AATAAA	-16	NA	119057205	119044187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_27973.known	chr11	-	4367	26	FSM	ENSG00000149428.20	ENST00000652093.1	4367	26	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	282.027051184811	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTCTGTATGTTTGAA	-4	True	NA	67	True	NA	NA	NA	119057227	119044310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119045655_119045780_119045835_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057152
transcript_27978.known	chr11	-	2023	17	FSM	ENSG00000149428.20	ENST00000530473.5	2023	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	333.363768792816	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACAAGTCTGAGGCCC	373	False	NA	NA	False	AAAAAG	-5	NA	119056850	119049039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119056804
transcript_27979.known	chr11	-	325	1	FSM	ENSG00000272186.1	ENST00000607709.1	325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGATTGTGAACCATAGT	NA	False	NA	NA	False	AATAAA	-25	NA	119067698	119067373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119067400_119067700
transcript_27980.known	chr11	+	3181	16	FSM	ENSG00000160695.16	ENST00000621676.5	3181	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.2556547240586	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGGATTTTTTTCTGG	16	True	NA	18	True	AATAAA	-20	NA	119067817	119081972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119068011_119069195_119069345_119069441_119069578_119070233_119070398_119071595_119071844_119073197_119073400_119073799_119073952_119076896_119077084_119077500_119077648_119077877_119078067_119078172_119078335_119078564_119078705_119078794_119078998_119079128_119079301_119081091_119081315_119081458
transcript_27988.known	chr11	+	1559	14	FSM	ENSG00000256269.11	ENST00000537841.5	1559	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	204.764780625515	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATCCTACTAATAAACCA	-12	True	NA	-16	True	GGGGCT	-43	NA	119084884	119093516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_27991.known	chr11	+	1936	14	FSM	ENSG00000256269.11	ENST00000650101.1	1936	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	278.846652519448	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	19	False	NA	-20	True	GGGGCT	-39	NA	119085221	119093512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085894_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_27998.known	chr11	+	1544	12	FSM	ENSG00000256269.11	ENST00000542044.5	1544	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	214.883170256547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGATGCCTGGGTTGCTG	12	True	NA	NA	False	NA	NA	NA	119084908	119093296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085067_119088634_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_28.known	ERCC-00067	+	628	1	FSM	ERCC-00067A	DQ883653	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00067_+_0_600
transcript_28007.known	chr11	+	1448	14	FSM	ENSG00000256269.11	ENST00000442944.7	1448	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	207.652873749273	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	-14	True	NA	-20	True	GGGGCT	-39	NA	119084882	119093512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_28008.known	chr11	+	1351	13	FSM	ENSG00000256269.11	ENST00000544387.5	1351	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	212.214252322715	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGCGCGTGTGGAG	17	True	NA	16	True	AATAAA	-16	NA	119084913	119093548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
transcript_28009.known	chr11	+	1347	12	FSM	ENSG00000256269.11	ENST00000543090.5	1347	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_8	293.550001372484	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTGAAGGTGTTGTG	33	False	NA	1	True	AATAAA	-1	NA	119084929	119093533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_28010.known	chr11	+	1469	13	FSM	ENSG00000256269.11	ENST00000542729.5	1469	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	284.153714269818	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTGCGCGTGTGG	-12	True	NA	14	True	AATAAA	-14	NA	119084884	119093546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
transcript_28011.known	chr11	-	1373	2	FSM	ENSG00000188486.4	ENST00000375167.1	1373	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGGAGCGTTTGTTTT	6700	False	NA	-28	True	ATTAAA	-15	NA	119095449	119093878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119094262_119094459
transcript_28026.known	chr11	-	1817	8	FSM	ENSG00000172269.20	ENST00000392834.7	1817	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	151.455523207984	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-1	True	NA	-10	True	AATAAA	-18	NA	119101878	119096509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
transcript_28027.known	chr11	-	1791	8	FSM	ENSG00000172269.20	ENST00000682791.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	154.53604031132	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100878_119101494
transcript_28028.known	chr11	-	2343	7	FSM	ENSG00000172269.20	ENST00000481084.5	2343	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	157.990242314729	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTATGTAGGTATATT	7	False	NA	-11	True	AATAAA	-17	NA	119102142	119096510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119101017
transcript_2803.known	chr1	-	828	5	FSM	ENSG00000126709.16	ENST00000362020.4	828	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	10.4731800328267	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTCCTGCTGTCAAT	-8	True	NA	-17	True	AATAAA	-15	NA	27672198	27666065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669232_27669347_27672122
transcript_28032.known	chr11	-	2214	7	FSM	ENSG00000172269.20	ENST00000682232.1	2214	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	208.196755231413	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCACTCCAGCCTGGGT	-1	True	NA	NA	False	NA	NA	NA	119101878	119096024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
transcript_28039.known	chr11	-	1689	8	FSM	ENSG00000172269.20	ENST00000682946.1	1689	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	143.590119607791	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_2804.known	chr1	+	3579	9	FSM	ENSG00000009780.16	ENST00000373954.11	3579	9	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_6	7.27044530960793	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAATTGTTGGATTTTGT	-14	True	NA	10	True	AATAAA	-18	NA	27725960	27763116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27749067_27749155_27755194_27755331_27759525_27759628_27760494
transcript_28040.known	chr11	-	1916	8	FSM	ENSG00000172269.20	ENST00000445653.6	1916	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	146.809330738331	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAAGTGTTGTCTTTTTC	6	True	NA	-33	True	NA	NA	NA	119101831	119096532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_28041.known	chr11	-	1760	9	FSM	ENSG00000172269.20	ENST00000682811.1	1760	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	138.533163899479	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	6	True	NA	-23	True	AATAAA	-5	NA	119101831	119096522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_28042.known	chr11	-	2458	7	FSM	ENSG00000172269.20	ENST00000683955.1	2458	7	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_6	52.652160449501	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-1	True	NA	-23	True	AATAAA	-5	NA	119101878	119096522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098488_119100261_119100409_119100629_119101139_119101494
transcript_28044.nnic	chr11	+	2308	11	NNC	ENSG00000172273.13	novel	3185	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	54.706855146316	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	-23	True	NA	28	True	AATAAA	-19	NA	119121568	119135054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_119121640_119123567_119123685_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_28049.known	chr11	+	3185	10	FSM	ENSG00000172273.13	ENST00000350777.7	3185	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	16.5864737394996	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGTCTATTTGTGG	-12	True	NA	NA	False	AATAAA	-28	NA	119121579	119136059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_28054.nic	chr11	+	1989	9	NIC	ENSG00000172273.13	novel	3185	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	51.424550314028	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	-12	True	NA	28	True	AATAAA	-19	NA	119121579	119135054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_119121640_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_28058.known	chr11	+	3716	10	FSM	ENSG00000160703.16	ENST00000409991.5	3716	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	25.4252717673665	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATTGTGGCCTCTTCTTT	8	True	NA	12	True	ATTAAA	-18	NA	119168727	119184012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119168895_119171355_119171474_119172355_119172426_119172900_119172990_119173478_119174099_119174452_119175275_119179692_119180289_119181170_119181258_119182093_119182346_119183117
transcript_28064.nnic	chr11	-	660	6	NIC	ENSG00000248712.8	novel	1173	8	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	9.3893556754444	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGCTGTGGGCTCTGG	-3	True	NA	-41	True	AATAAA	-20	NA	119195845	119190255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_119190453_119190709_119190841_119193150_119193244_119193765_119193886_119194922_119194995_119195798
transcript_28069.nnic	chr11	-	447	4	NIC	ENSG00000248712.8	novel	1173	8	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	11.4309521329882	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGCTGTGGGCTCTGG	-3	True	NA	-41	True	AATAAA	-20	NA	119195845	119190255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_119190453_119190709_119190841_119194922_119194995_119195798
transcript_28071.known	chr11	-	3327	16	FSM	ENSG00000076706.17	ENST00000264036.6	3327	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	5.39382362831168	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACATTGCTTTTTATTC	-2	True	NA	-4	True	AATAAA	-19	NA	119317130	119308528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119309916_119310348_119310467_119310755_119310904_119311089_119311186_119311279_119311422_119311529_119311652_119311807_119311950_119312051_119312171_119312265_119312429_119312526_119312649_119312769_119312950_119314488_119314577_119314678_119314750_119314832_119315041_119315138_119315264_119317034
transcript_28072.known	chr11	-	3164	14	FSM	ENSG00000076706.17	ENST00000528533.5	3164	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	5.50309219154459	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACGTGCCTGCGGTGAGG	-2	True	NA	NA	False	AAAAAG	-5	NA	119317130	119308971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119309916_119310348_119310467_119310755_119311422_119311529_119311652_119311807_119311950_119312051_119312171_119312265_119312429_119312526_119312649_119312769_119312950_119314488_119314577_119314678_119314750_119314832_119315041_119315138_119315264_119317034
transcript_28076.known	chr11	+	2783	1	FSM	ENSG00000173456.5	ENST00000311413.5	2783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTCTGTGTGCATC	2	True	NA	17	True	AATAAA	-17	NA	119334526	119337309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119334500_119337300
transcript_28081.nnic	chr11	+	739	5	Fusion	ENSG00000245248.8_ENSG00000254561.4	novel	2525	4	NA	NA	-21	-22190	multi-exon	FALSE	canonical	0	0	junction_4	7.59522876548166	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCAGTCTCAGGTAT	NA	False	NA	NA	False	AATAAA	-16	NA	119381749	119637055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_119381909_119394980_119395155_119469808_119469976_119543523_119543632_119636924
transcript_28083.known	chr11	+	1012	4	FSM	ENSG00000245248.8	ENST00000656292.1	1012	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.20144916122817	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACTGGATCAGGGATT	3	True	NA	NA	False	AATAAA	-13	NA	119381806	119413108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119381909_119394980_119395155_119410677_119410776_119412470
transcript_28089.known	chr11	+	3844	3	FSM	ENSG00000245248.8	ENST00000660630.1	3844	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	6	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGGAGTGTGCACCTA	6	True	NA	NA	False	NA	NA	NA	119381809	119413071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119381909_119394980_119395155_119409500
transcript_28091.nnic	chr11	+	986	3	NIC	ENSG00000245248.8	novel	1012	4	NA	NA	-21	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTCTTCTGATGGGCCTG	NA	False	NA	NA	False	AATAAA	-28	NA	119381749	119413123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_119381909_119394980_119395155_119412470
transcript_28093.nic	chr11	+	604	3	ISM	ENSG00000245248.8	ENST00000530002.1	764	4	-85	5629	-21	-5629	5prime_fragment	FALSE	canonical	3	11	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGCATCATAGTCCTT	NA	False	NA	NA	False	AGTAAA	-15	NA	119381749	119470079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_119381909_119394980_119395155_119469808
transcript_28097.known	chr11	+	2525	4	FSM	ENSG00000245248.8	ENST00000498979.7	2525	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.76029781788188	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAATAAACCTCTTTGT	NA	False	NA	NA	False	NA	NA	NA	119381770	119500595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119381909_119394980_119395155_119469808_119469976_119498549
transcript_28107.known	chr11	-	2427	1	FSM	ENSG00000154096.14	ENST00000584021.1	2427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAAAGGGCA	2671	False	NA	-32	True	NA	NA	NA	119421246	119418819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119418800_119421200
transcript_28108.known	chr11	+	632	2	FSM	ENSG00000263873.1	ENST00000578216.1	632	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCTTCACGAACTCTCA	NA	False	NA	NA	False	NA	NA	NA	119417950	119419114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119418135_119418666
transcript_28109.known	chr11	-	897	4	FSM	ENSG00000154096.14	ENST00000528295.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	516.431559410882	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTGGGATGGTGGGGTA	2	True	NA	70	True	NA	NA	NA	119423172	119419072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119419521_119420050_119420379_119420868_119420930_119423112
transcript_2811.known	chr1	+	3034	9	FSM	ENSG00000117758.14	ENST00000373943.9	3034	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	7.59831395771457	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTATCTGTGCCTTG	-10	True	NA	14	True	AATAAA	-14	NA	27773218	27824443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850_27817924_27819649_27819733_27822230
transcript_28115.nnic	chr11	+	1124	5	NNC	ENSG00000254854.1	novel	523	4	NA	NA	-44	7081	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	1.92028643696715	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATGTATTATCGTGTA	NA	False	NA	NA	False	CATAAA	-5	NA	119729538	119746704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_119729807_119733656_119733751_119736806_119736919_119739530_119739789_119746312
transcript_28122.known	chr11	-	1592	4	FSM	ENSG00000255216.2	ENST00000667462.1	1592	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTTAATCTGTCTTT	NA	False	NA	NA	False	AATAAA	-14	NA	120013303	120008043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_120008794_120008974_120009100_120012092_120012200_120012693
transcript_28123.known	chr11	+	1034	2	FSM	ENSG00000137709.10	ENST00000529039.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAGAACACAAGAGCAAA	NA	False	NA	NA	False	NA	NA	NA	120317165	120319187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120317365_120318352
transcript_28124.nic	chr11	+	787	5	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-8	-184	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	25.907286619791	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	-11	True	NA	18	True	AATAAA	-13	NA	120325287	120330634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_120325369_120327121_120327327_120327440_120327641_120329976_120330050_120330406
transcript_28126.nic	chr11	+	628	4	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-54	-184	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	19.2006944318862	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	NA	False	NA	18	True	AATAAA	-13	NA	120325241	120330634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_120325369_120327440_120327641_120329976_120330050_120330406
transcript_28127.nic	chr11	+	1144	4	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-8	-184	intron_retention	FALSE	canonical	0	0	junction_2	29.7806797922561	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	-11	True	NA	18	True	AATAAA	-13	NA	120325287	120330634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_120325369_120327121_120327327_120327440_120327641_120329976
transcript_28128.known	chr11	+	3930	4	FSM	ENSG00000181264.9	ENST00000529187.1	3930	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	24.2624538467705	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTGTCTTTATAT	8	True	NA	NA	False	AGTAAA	-16	NA	120325306	120333682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120325369_120327121_120327641_120329976_120330050_120330406
transcript_28130.known	chr11	+	3980	3	FSM	ENSG00000181264.9	ENST00000375095.3	3980	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTCTTTATATTTAT	0	True	NA	NA	False	AGTAAA	-20	NA	120325298	120333686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120325369_120327440_120327641_120329976
transcript_28131.nic	chr11	+	387	3	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-13	-184	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	5.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	8	False	NA	18	True	AATAAA	-13	NA	120325282	120330634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_120325369_120329976_120330050_120330406
transcript_28132.known	chr11	+	1434	3	FSM	ENSG00000181264.9	ENST00000314475.6	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	27.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGATGTTCAGGCAGTT	-3	True	NA	NA	False	NA	NA	NA	120325295	120330818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120325369_120327121_120327641_120329976
transcript_28134.known	chr11	+	3776	2	FSM	ENSG00000181264.9	ENST00000531346.1	3776	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGAGTCTGTCTTTA	-3	True	NA	NA	False	AGTAAA	-13	NA	120325295	120333679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120325369_120329976
transcript_28138.nnic	chr11	-	919	3	Antisense	novelGene_ENSG00000109927.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	0.5	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTGTACTTTCTTCA	NA	False	NA	-10	True	AATAAA	-18	NA	121198679	121187473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_121187985_121193670_121193929_121198529
transcript_28141.known	chr11	+	6854	5	FSM	ENSG00000109929.10	ENST00000264027.9	6854	5	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	87.3194565947361	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGCTATATGT	-2	True	NA	14	True	AATAAA	-25	NA	121292770	121313410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_28145.known	chr11	+	2258	5	FSM	ENSG00000109929.10	ENST00000392789.2	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	272.607203683248	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATCAGTTGAGTATTAT	79	False	NA	NA	False	AATAAA	-18	NA	121292851	121308633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121293079_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_28148.known	chr11	+	767	4	FSM	ENSG00000109929.10	ENST00000531140.1	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	100.313951616357	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGGAGGATGGGAGAGG	-14	True	NA	NA	False	AATAGA	-17	NA	121292758	121306741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385
transcript_28150.known	chr11	+	921	3	FSM	ENSG00000109929.10	ENST00000534455.5	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	103	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAATGAAGTCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	121292680	121304925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121292817_121303365_121303586_121304360
transcript_28151.known	chr11	+	2391	2	FSM	ENSG00000109929.10	ENST00000524683.5	2391	2	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	121292770	121305710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121292817_121303365
transcript_28152.nnic	chr11	+	886	4	Antisense	novelGene_ENSG00000255248.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAAGCCTGTTTGGTGGT	NA	False	NA	6	True	ATTAAA	-15	NA	122524716	122555560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_122524847_122547015_122547174_122549304_122549483_122555140
transcript_28154.nnic	chr11	+	1023	4	Antisense	novelGene_ENSG00000255248.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAAGCCTGTTTGGTGGT	NA	False	NA	6	True	ATTAAA	-15	NA	122524484	122555560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_122524847_122547015_122547174_122549399_122549483_122555140
transcript_28156.nnic	chr11	+	907	4	Antisense	novelGene_ENSG00000255248.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	12	True	ATTAAA	-21	NA	122524625	122555566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_122524847_122547015_122547174_122549399_122549502_122555140
transcript_28158.known	chr11	-	2684	2	FSM	ENSG00000255248.10	ENST00000524376.1	2684	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAATTTGTGTTGATTT	-6	True	NA	NA	False	AATAAA	-17	NA	122100447	122089109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_122091720_122100373
transcript_28160.known	chr11	+	6865	14	FSM	ENSG00000154127.10	ENST00000284273.6	6865	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	6.23314294765628	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGCAATGTCATTTTA	-1	True	NA	NA	False	AATAAA	-19	NA	122655721	122814473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_122656211_122776218_122776273_122777023_122777211_122779496_122779696_122783052_122783223_122789099_122789309_122794701_122794835_122796155_122796277_122796910_122797034_122798941_122799035_122801187_122801333_122806409_122806517_122808066_122808177_122809748
transcript_28166.known	chr11	-	5032	7	FSM	ENSG00000166250.12	ENST00000448775.4	5032	7	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_1	19.8382346884887	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTAGGAGAAGCTGAAG	-5	True	NA	-34	True	AATAAA	-14	NA	123195248	123069871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123073775_123074701_123074844_123083084_123083208_123083679_123083848_123084511_123084714_123097794_123097953_123194912
transcript_28178.known	chr11	+	724	3	FSM	ENSG00000288061.2	ENST00000660892.2	731	3	0	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTACATTTGCACCTAG	5	True	NA	NA	False	AATAAA	-10	NA	123062654	123084870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_123062698_123063330_123063514_123084372
transcript_2818.nic	chr1	+	1230	7	ISM	ENSG00000117758.14	ENST00000373943.9	3034	9	-15	6043	-15	326	5prime_fragment	FALSE	canonical	3	89	junction_3	7.24952105697718	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTTAGTCATATCAGCT	-25	True	NA	NA	False	ATTAAA	-14	NA	27773203	27818400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850
transcript_28180.known	chr11	-	2264	9	FSM	ENSG00000109971.14	ENST00000534624.6	2264	9	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_5	2043.38068146271	34439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-1	True	NA	NA	False	AATAAA	-26	NA	123062136	123057488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_28181.known	chr11	-	2186	8	FSM	ENSG00000109971.14	ENST00000227378.7	2186	8	0	0	0	0	multi-exon	FALSE	canonical	3	6979	junction_5	2153.0990100176	8958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAATTGCTTTGAGTC	1658	False	NA	NA	False	AATAAA	-18	NA	123061332	123057496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119
transcript_28182.known	chr11	+	1212	3	FSM	ENSG00000023171.20	ENST00000640939.1	1212	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATTCTTTTATTCATG	31	False	NA	15	True	AATAAA	-27	NA	123430349	123435719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_123431167_123432017_123432127_123435433
transcript_28183.known	chr11	+	1180	2	FSM	ENSG00000023171.20	ENST00000533341.3	1180	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGAAATTCTTTTATT	-4	True	NA	11	True	AATAAA	-23	NA	123430268	123435715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_123431167_123435433
transcript_28188.known	chr11	-	3384	7	FSM	ENSG00000166261.11	ENST00000529691.1	3384	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	26.0154868406408	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-22	True	NA	-3	True	AGTAAA	-14	NA	123741671	123724779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123741548
transcript_28192.nnic	chr11	-	727	5	NNC	ENSG00000166261.11	novel	640	4	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.8696602308918	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGATTGGCATTGACT	NA	False	NA	-5	True	ATTAAA	-16	NA	123741689	123738624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_123738865_123739433_123739544_123740116_123740233_123740416_123740537_123741548
transcript_28194.nnic	chr11	-	818	5	NNC	ENSG00000166261.11	novel	640	4	NA	NA	178	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.931848688197	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGATTGGCATTGACT	213	False	NA	-5	True	ATTAAA	-16	NA	123741436	123738624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_123738911_123739433_123739544_123740116_123740233_123740416_123740537_123741250
transcript_28195.nnic	chr11	-	773	5	NIC	ENSG00000166261.11	novel	640	4	NA	NA	-14	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	24.6107192093202	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGATTGGCATTGACT	NA	False	NA	-5	True	ATTAAA	-16	NA	123741689	123738624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_123738911_123739433_123739544_123740116_123740233_123740416_123740537_123741548
transcript_28200.known	chr11	-	640	4	FSM	ENSG00000166261.11	ENST00000525391.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	24.2395452835971	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATTGGCATTGACTA	-16	True	NA	-4	True	ATTAAA	-17	NA	123741665	123738623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123738911_123740116_123740233_123740416_123740537_123741548
transcript_28205.nnic	chr11	-	617	4	NNC	ENSG00000166261.11	novel	640	4	NA	NA	-14	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.7907545067406	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCTGATTGGCATTGACT	NA	False	NA	-5	True	ATTAAA	-16	NA	123741689	123738624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_123738865_123740116_123740233_123740416_123740537_123741548
transcript_2821.known	chr1	+	703	4	FSM	ENSG00000117758.14	ENST00000468761.1	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	4.10960933531265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCATTTTGATATAT	26	True	NA	NA	False	AATGAA	-38	NA	27773254	27802039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677
transcript_28215.known	chr11	+	4300	19	FSM	ENSG00000110002.16	ENST00000456829.7	4300	19	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	67.0373030483775	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGGCCCTACCTATG	-3	True	NA	NA	False	AGTAAA	-45	NA	124115449	124147721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_28217.known	chr11	+	3419	18	FSM	ENSG00000110002.16	ENST00000392748.5	3419	18	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_12	61.0468082930481	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	266	False	NA	17	True	ATTAAA	-27	NA	124115403	124146909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_28220.known	chr11	+	1978	11	FSM	ENSG00000110002.16	ENST00000449321.5	1978	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	68.6393473162442	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	266	False	NA	18	True	AATAAA	-20	NA	124115403	124124841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_28221.known	chr11	+	1863	10	FSM	ENSG00000110002.16	ENST00000361352.9	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	41.3951151170709	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	266	False	NA	18	True	AATAAA	-20	NA	124115403	124124841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_28223.known	chr11	-	5441	10	FSM	ENSG00000110013.13	ENST00000263593.8	5441	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.21108319357027	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAGGATGTGCAAAATGT	-6	True	NA	NA	False	AATACA	-26	NA	124673739	124633112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124637203_124638541_124638738_124639709_124639868_124647364_124647499_124648065_124648176_124649618_124649797_124654654_124654794_124660627_124660804_124669359_124669522_124673641
transcript_28229.known	chr11	-	2272	3	FSM	ENSG00000110013.13	ENST00000436137.2	2272	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTTATTCCTTTTG	12	False	NA	NA	False	ATTAAA	-17	NA	124673821	124658873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124660804_124669359_124669522_124673641
transcript_28231.known	chr11	+	5144	9	FSM	ENSG00000154144.13	ENST00000441174.8	5144	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	63.3541632412583	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATCATCTGCATTT	-13	True	NA	3	True	AATAAA	-23	NA	124622863	124635926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626472_124626610_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_28232.known	chr11	+	1634	8	FSM	ENSG00000154144.13	ENST00000473629.6	1634	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	69.2611149261714	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTGTTTACTTTCATC	2950	False	NA	32	True	AATAAA	-11	NA	124622835	124632434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626812_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_28233.known	chr11	+	4468	8	FSM	ENSG00000154144.13	ENST00000284290.8	4468	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	49.4912896892174	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTTTGGAGCTAC	-2	True	NA	14	True	AATAAA	-22	NA	124622874	124635398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_28234.known	chr11	+	434	3	FSM	ENSG00000064199.7	ENST00000529498.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTCTTTAAATAAACTG	1	True	NA	NA	False	AAAAAG	-6	NA	124673909	124675875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124673953_124675237_124675419_124675665
transcript_28235.known	chr11	-	1163	7	FSM	ENSG00000019102.12	ENST00000326621.10	1163	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCTCCTTCTTCTTTC	1	True	NA	-1	True	ATTAAA	-15	NA	124752255	124747473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124747668_124748389_124748535_124748643_124748764_124749707_124749867_124750713_124750922_124751422_124751581_124752076
transcript_28236.known	chr11	-	1191	6	FSM	ENSG00000019102.12	ENST00000403470.1	1191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.62480768092719	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTTCATATATTTTAA	0	True	NA	NA	False	AATAAA	-21	NA	124752193	124748105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124748535_124748643_124748764_124749707_124749867_124750713_124750922_124751422_124751581_124752076
transcript_2824.known	chr1	+	1029	7	FSM	ENSG00000117751.18	ENST00000431586.1	1029	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.24933858267454	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTGATTTGATATTTT	524	False	NA	NA	False	AAGAAA	-41	NA	27831323	27850432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27831367_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_28241.known	chr11	-	775	4	FSM	ENSG00000120458.13	ENST00000527140.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	67.4899169423766	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAAGGCTCCATCTTT	8	True	NA	NA	False	NA	NA	NA	124800390	124767947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124768029_124772993_124773055_124774718_124774832_124799870
transcript_28242.known	chr11	+	1942	12	FSM	ENSG00000154134.15	ENST00000527196.5	1942	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	34.2930973947472	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCCCTGTCTGTCTGGTT	NA	False	NA	18	True	AATAAA	-20	NA	124876120	124881470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124876461_124877160_124877185_124877266_124877310_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_28244.known	chr11	+	2139	12	FSM	ENSG00000154134.15	ENST00000525448.5	2139	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	33.4752900110263	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	32	False	NA	14	True	AATAAA	-16	NA	124876485	124881466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877753_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_2825.known	chr1	+	2651	7	FSM	ENSG00000117751.18	ENST00000373931.8	2651	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.24933858267454	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTCTAATGAGAGAATG	22	True	NA	13	True	AATAAA	-20	NA	27830821	27851672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27831247_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_2826.known	chr1	+	2340	7	FSM	ENSG00000117751.18	ENST00000311772.10	2340	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	3.24893144826965	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATGAGAGAATGTAGT	-18	True	NA	17	True	AATAAA	-24	NA	27830781	27851676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27830892_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_28265.known	chr11	-	2052	3	FSM	ENSG00000285825.2	ENST00000655771.1	2052	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAGCCTAGTTATAA	24	False	NA	-26	True	AATAAA	-4	NA	124953966	124949204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124950560_124951338_124951551_124953481
transcript_2827.known	chr1	+	2713	6	FSM	ENSG00000130775.16	ENST00000373921.8	2713	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	20.0159936051149	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGAACGGTATCATT	-5	True	NA	19	True	AATAAA	-22	NA	27872543	27886675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27883044_27885294_27885452_27885866
transcript_28271.known	chr11	+	3924	16	FSM	ENSG00000149548.15	ENST00000529051.5	3924	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.00476028616731	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTATTTCCTTGCAG	-14	True	NA	NA	False	AATAAA	-20	NA	124954120	125041487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124954371_124954723_124954910_124959114_124959265_124959814_124960004_124975095_124975210_124977477_124977601_124986741_124986889_124987126_124988135_124991460_124991584_124992579_124992688_124993168_124993244_125003866_125003960_125005108_125005213_125038430_125038605_125038887_125039070_125040589
transcript_28275.known	chr11	-	848	7	FSM	ENSG00000150433.10	ENST00000529583.5	848	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	46.6538672923621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCATCACTAAGACAAAT	7	True	NA	NA	False	NA	NA	NA	125111604	125097485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125110490_125110550_125110643_125110747_125111538
transcript_2828.known	chr1	+	1650	5	FSM	ENSG00000130775.16	ENST00000373925.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	32.9431328200583	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTATCATTTATTAAATTC	-5	True	NA	29	True	AATAAA	-32	NA	27872543	27886685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27885294_27885452_27885866
transcript_28284.known	chr11	-	1103	6	FSM	ENSG00000150433.10	ENST00000532407.5	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	52.2861358296824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATAATATATAAAATT	149	False	NA	NA	False	AAAAAG	-20	NA	125111579	125097243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125110643_125110747_125111538
transcript_28293.known	chr11	-	954	5	FSM	ENSG00000150433.10	ENST00000532156.5	954	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	50.2916494062384	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTGATAATATATAAAATTA	149	False	NA	NA	False	AAAAAG	-21	NA	125111579	125097242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101257_125102131_125102318_125102636_125102810_125111538
transcript_28296.known	chr11	-	734	5	FSM	ENSG00000150433.10	ENST00000529609.5	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	51.1395150544078	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATTGCCAAATTGTCCC	-10	True	NA	NA	False	NA	NA	NA	125111621	125097441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101257_125102131_125102352_125102733_125102810_125111538
transcript_28300.known	chr11	-	1828	5	FSM	ENSG00000150433.10	ENST00000531909.5	1828	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	42.6321474945844	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTTTACAACGGTCTC	20	True	NA	NA	False	NA	NA	NA	125111708	125096544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102636_125102810_125111538
transcript_28303.known	chr11	-	3805	5	FSM	ENSG00000150433.10	ENST00000682305.1	3805	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	31.5792653492763	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGTATGAATAACAAAC	-15	True	NA	NA	False	ATTAAA	-16	NA	125111626	125094388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111538
transcript_28304.nic	chr11	-	1251	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	41.811332195949	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111764	125097034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111584
transcript_28305.known	chr11	-	1034	5	FSM	ENSG00000150433.10	ENST00000279968.8	1034	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	46.6442654567526	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGATAATATATAAAATT	149	False	NA	NA	False	AAAAAG	-20	NA	125111579	125097243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102352_125102636_125102810_125111538
transcript_28306.nic	chr11	-	1345	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	44.073801742078	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111778	125097034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125097741_125101200_125101304_125102131_125102352_125102733_125102810_125111538
transcript_2831.known	chr1	+	1082	4	FSM	ENSG00000130775.16	ENST00000373927.7	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	34.2960963117119	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAGACCCTTATGGAG	0	True	NA	NA	False	NA	NA	NA	27872548	27886533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27872666_27876587_27876729_27885294_27885452_27885866
transcript_28311.known	chr11	-	773	5	FSM	ENSG00000150433.10	ENST00000531851.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	51.744564931981	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTGGTTCTTTTTGAT	22	True	NA	NA	False	AAAAAG	-7	NA	125111589	125097256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125110490_125110550_125111538
transcript_2832.nnic	chr1	+	1092	3	NIC	ENSG00000130775.16	novel	2713	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	46	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGAACGGTATCATT	-9	True	NA	19	True	AATAAA	-22	NA	27872539	27886675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_27872666_27885294_27885452_27885866
transcript_28321.nnic	chr11	-	1161	4	NIC	ENSG00000150433.10	novel	1828	5	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	49.8620318701737	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	11	True	NA	-21	True	AATAAA	-17	NA	125111717	125097034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125097741_125101200_125101304_125102636_125102810_125111538
transcript_28323.known	chr11	-	857	4	FSM	ENSG00000150433.10	ENST00000531262.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	45.5850852801659	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCAGATGTTGGTCATTG	-6	True	NA	-128	True	NA	NA	NA	125111617	125097141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125111538
transcript_28324.nic	chr11	-	1050	4	NIC	ENSG00000150433.10	novel	857	4	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_2	52.3259018078045	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111749	125097034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125097741_125101200_125101304_125102733_125102810_125111584
transcript_2833.known	chr1	-	1162	9	FSM	ENSG00000117748.10	ENST00000373909.7	1162	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	264.802491255275	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAAATAAGCTTGTTAC	-13	True	NA	NA	False	NA	NA	NA	27914746	27891923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914626
transcript_28345.known	chr11	-	4583	10	FSM	ENSG00000149557.14	ENST00000278919.8	4583	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_6	98.1817412810939	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTCCCAGCTTACT	-13	True	NA	NA	False	AATACA	-27	NA	125496265	125442880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125496120
transcript_28357.known	chr11	-	543	3	FSM	ENSG00000149557.14	ENST00000526507.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	237.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTTTGGAGTGTGAT	2693	False	NA	0	True	AATAAA	-24	NA	125451520	125445744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125446112_125448501_125448568_125451410
transcript_28358.known	chr11	-	1053	2	FSM	ENSG00000149557.14	ENST00000366139.3	1053	2	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGTGATGTGGCCTTTG	-25	True	NA	NA	False	AGTAAA	-8	NA	125496277	125488926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125489823_125496120
transcript_28359.known	chr11	-	569	2	FSM	ENSG00000149557.14	ENST00000527534.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCGAGAACCTAGCTCC	211	False	NA	NA	False	AATGAA	-43	NA	125496122	125489540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125489823_125495835
transcript_28360.known	chr11	-	750	2	FSM	ENSG00000149557.14	ENST00000524435.1	750	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGCGGAGCAGTGCCC	668	False	NA	NA	False	NA	NA	NA	125495665	125489350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125489823_125495387
transcript_28364.known	chr11	+	3423	2	FSM	ENSG00000255537.1	ENST00000527818.1	3423	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGGTGTACAAATTCCAG	NA	False	NA	NA	False	AATAAA	-20	NA	125495213	125499528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125495616_125496507
transcript_28368.known	chr11	+	2191	11	FSM	ENSG00000149547.15	ENST00000278903.11	2191	11	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_9	82.8483554453557	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	29	True	NA	22	True	ATTAAA	-22	NA	125569476	125584684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_28371.known	chr11	+	1544	11	FSM	ENSG00000149547.15	ENST00000534546.5	1544	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	393.109259621292	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTATTTTGTGAATT	10	True	NA	NA	False	NA	NA	NA	125569457	125584060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125569574_125572457_125572570_125575304_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_28374.known	chr11	+	1625	10	FSM	ENSG00000149547.15	ENST00000527235.6	1625	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	412.438817011418	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	41	True	NA	NA	False	NA	NA	NA	125569488	125584242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125582345_125582421_125583520
transcript_28379.known	chr11	+	1407	10	FSM	ENSG00000149547.15	ENST00000615917.4	1407	10	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_2	415.577004794034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCTTGGATGAATGGA	10	True	NA	NA	False	NA	NA	NA	125569457	125584027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125569574_125572457_125572570_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_28384.known	chr11	+	1718	11	FSM	ENSG00000149547.15	ENST00000620753.4	1718	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	399.318031148106	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCTGAAGA	10	True	NA	NA	False	NA	NA	NA	125569457	125584251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125569515_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_28385.known	chr11	+	4173	19	FSM	ENSG00000134910.14	ENST00000649491.1	4173	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	383.137361339665	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTCTTTCATAT	6	True	NA	-20	True	AATGAA	-11	NA	125592857	125622721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125592919_125594049_125594098_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_28387.known	chr11	+	2402	19	FSM	ENSG00000134910.14	ENST00000529196.5	2402	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	391.758287156195	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	-16	True	NA	23	True	NA	NA	NA	125592835	125620888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125592919_125593637_125593726_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_2839.known	chr1	-	1584	9	FSM	ENSG00000117748.10	ENST00000373912.8	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_4	53.4297143451095	2766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTTTTCTTTCTGAG	-8	True	NA	0	True	AATAAA	-29	NA	27914575	27891523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914433
transcript_28392.known	chr11	+	2160	17	FSM	ENSG00000134910.14	ENST00000531491.5	2160	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	306.023072812737	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	15	True	NA	23	True	NA	NA	NA	125592866	125620888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125592919_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_28397.nic	chr11	+	2233	15	NIC	ENSG00000149554.14	novel	1845	14	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_13	100.266507114687	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	4735	False	NA	20	True	AATAAA	-16	NA	125625715	125676255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125656205_125656336_125675927
transcript_284.known	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_17	3130.11688429403	2678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
transcript_28406.known	chr11	+	1845	14	FSM	ENSG00000149554.14	ENST00000428830.6	1845	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	98.6919179799248	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	-4	True	NA	20	True	AATAAA	-16	NA	125625973	125676255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125675927
transcript_28428.known	chr11	+	4128	13	FSM	ENSG00000149554.14	ENST00000438015.7	4128	13	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	56.0674197333492	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	4182	False	NA	23	True	AATAAA	-25	NA	125625162	125657147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_28442.known	chr11	+	3390	13	FSM	ENSG00000149554.14	ENST00000532449.6	3390	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.76102178907	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAATTTGTATAGAAT	224	False	NA	NA	False	NA	NA	NA	125626228	125656845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626643_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_28444.known	chr11	+	3513	13	FSM	ENSG00000149554.14	ENST00000534070.5	3513	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.5623732115341	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	-46	True	NA	23	True	AATAAA	-25	NA	125626340	125657147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626576_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_28448.known	chr11	+	1571	12	FSM	ENSG00000149554.14	ENST00000278916.8	1571	12	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_11	110.444631055229	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTAAGCAAAACTTTGG	-1	True	NA	-47	True	NA	NA	NA	125625976	125655506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125655224
transcript_28450.known	chr11	+	1653	12	FSM	ENSG00000149554.14	ENST00000544373.5	1653	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	104.094442179023	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAGATGAACCAATAAAG	-1	True	NA	-29	True	AAAAAG	-24	NA	125625976	125655710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626013_125626748_125626834_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_28454.known	chr11	+	668	7	FSM	ENSG00000149554.14	ENST00000527013.6	668	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	130.070173368071	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGACCAACCCAGTGACA	13	False	NA	NA	False	TTTAAA	-34	NA	125626001	125635435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626030_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428
transcript_28463.known	chr11	-	808	2	FSM	ENSG00000260209.1	ENST00000564354.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATCAAATCTAAGCGAT	NA	False	NA	NA	False	TTTAAA	-15	NA	125874398	125873030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125873686_125874245
transcript_28469.known	chr11	+	1451	3	FSM	ENSG00000198331.11	ENST00000425380.7	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	6.5	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	-26	True	NA	14	True	ATTAAA	-17	NA	125887667	125900646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125887766_125891422_125891473_125899343
transcript_28470.known	chr11	-	1419	3	FSM	ENSG00000110060.9	ENST00000613398.4	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	46	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTTGTTGTGTTTTT	-13	True	NA	-5	True	ATTAAA	-17	NA	125903221	125893485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125894287_125895223_125895790_125903169
transcript_28475.nnic	chr11	+	1498	2	NIC	ENSG00000198331.11	novel	1451	3	NA	NA	-97	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	478	False	NA	14	True	ATTAAA	-17	NA	125887570	125900646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_125887766_125899343
transcript_28477.known	chr11	-	1829	4	FSM	ENSG00000110060.9	ENST00000227474.8	1829	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	22.4845626053867	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	2	True	NA	-4	True	ATTAAA	-18	NA	125903206	125893484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125894287_125895223_125895790_125895906_125896331_125903169
transcript_28478.known	chr11	-	1792	3	FSM	ENSG00000110060.9	ENST00000530811.5	1792	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	15	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	6878	False	NA	-4	True	ATTAAA	-18	NA	125896330	125893484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125894287_125895223_125895790_125895906
transcript_28479.known	chr11	-	605	3	FSM	ENSG00000110060.9	ENST00000534158.5	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	12.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATCCGTATATTGGC	-13	True	NA	NA	False	NA	NA	NA	125903221	125895660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125895790_125895906_125896331_125903169
transcript_28483.known	chr11	+	1646	12	FSM	ENSG00000109832.14	ENST00000525943.1	1646	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	34.2877950962436	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCAAGATTATTTCTT	48	False	NA	-2	True	AATAAA	-2	NA	125903375	125923083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125903431_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_28485.known	chr11	+	7424	12	FSM	ENSG00000109832.14	ENST00000263576.11	7424	12	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	12.4322959854998	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGTCTATCTCAGTCT	14	True	NA	NA	False	AATAAA	-33	NA	125904507	125928843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125904581_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_28501.known	chr11	-	1791	7	FSM	ENSG00000165526.9	ENST00000526942.5	1791	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.0323396106332	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGTTAGCTCCAGCT	26	False	NA	NA	False	NA	NA	NA	126211629	126202781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209490_126209723_126210889_126211056_126211449
transcript_28504.known	chr11	-	2468	7	FSM	ENSG00000165526.9	ENST00000298317.9	2468	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	5.98377435700541	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGATGACTATATTTGT	5	True	NA	-26	True	AATAAA	-19	NA	126211650	126202095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211449
transcript_28516.known	chr11	-	1030	3	FSM	ENSG00000165526.9	ENST00000532800.1	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGTGACAGAGTGAG	25	False	NA	NA	False	NA	NA	NA	126211630	126209039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126209723_126210889_126211056_126211449
transcript_28517.known	chr11	+	1825	11	FSM	ENSG00000110074.12	ENST00000687699.1	1827	11	2	0	2	0	multi-exon	FALSE	canonical	2	11	junction_1	96.0606058694197	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAATCCATCTGGAGGCC	58	False	NA	NA	False	NA	NA	NA	126269208	126277931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126269416_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_28520.known	chr11	+	1427	10	FSM	ENSG00000110074.12	ENST00000525770.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	99.7441170640599	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGCACAGGCAGTGAG	20	True	NA	NA	False	NA	NA	NA	126269170	126277840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126269292_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_28525.known	chr11	+	2016	9	FSM	ENSG00000197798.9	ENST00000533050.6	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_7	65.9506207324844	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTATTTCTCTGGGCAG	-5	True	NA	-15	True	TATAAA	-1	NA	126211781	126262968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_28530.nic	chr11	+	2064	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	-330	0	combination_of_known_junctions	TRUE	canonical	3	160	junction_7	112.9491035821	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	NA	False	NA	-1	True	NA	NA	NA	126211393	126262631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_28531.nic	chr11	+	2354	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	-330	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_7	112.9491035821	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCTAAAAGGCAATTTA	NA	False	NA	5	True	TATAAA	-9	NA	126211393	126262921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_2854.known	chr1	+	2178	3	FSM	ENSG00000158156.9	ENST00000373884.6	2178	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	21	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGTCTGTGTCATCA	-29	True	NA	17	True	AATAAA	-17	NA	27959972	27968093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27960363_27963496_27963694_27966502
transcript_2856.known	chr1	+	1866	8	FSM	ENSG00000130768.15	ENST00000373894.8	1866	8	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	17.835987468587	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	6	True	NA	21	True	AAAACA	-20	NA	27934999	27959152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_28561.known	chr11	+	1616	8	FSM	ENSG00000197798.9	ENST00000360194.8	1616	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	161.12791217425	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	-14	True	NA	-1	True	NA	NA	NA	126211772	126262631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_28562.known	chr11	+	1862	8	FSM	ENSG00000197798.9	ENST00000627851.2	1862	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	167.672908013288	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGCCTTCACCTTAT	NA	False	NA	1	True	TATAAA	-17	NA	126211723	126262984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_28563.known	chr11	+	1951	11	FSM	ENSG00000110074.12	ENST00000263578.10	1951	11	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_6	35.2335067797686	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	3	True	NA	17	True	AATACA	-17	NA	126269153	126278126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_28564.known	chr11	-	2986	14	FSM	ENSG00000182934.12	ENST00000332118.11	2986	14	0	0	0	0	multi-exon	TRUE	canonical	1	101	junction_10	71.2001097000684	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAGGTCTTGGAG	23	False	126268918	-28	True	AATAAA	-14	NA	126268895	126262937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268002_126268087_126268687
transcript_28565.known	chr11	-	856	3	FSM	ENSG00000182934.12	ENST00000528744.5	856	3	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	7.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTGAGTTCTTTGGAT	-2	True	NA	36	True	AAAAAG	-38	NA	126268920	126267173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126267713_126268002_126268087_126268687
transcript_28566.known	chr11	+	2210	9	FSM	ENSG00000110074.12	ENST00000534315.5	2210	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	102.100364225599	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	1794	False	NA	17	True	AATACA	-17	NA	126270944	126278126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126271658_126272968_126273080_126273335_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_28567.known	chr11	+	2068	6	FSM	ENSG00000150455.14	ENST00000392680.6	2068	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.62168800331654	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTACTTTTGTGCCCCCC	5	True	NA	NA	False	AATGAA	-19	NA	126283117	126294684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126283154_126289664_126289818_126290461_126290586_126290802_126290962_126292476_126293056_126293667
transcript_2857.known	chr1	+	1548	7	FSM	ENSG00000130768.15	ENST00000373888.8	1548	7	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	19.2649653228053	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGCTTCCCACAGTCT	1	True	NA	26	True	GATAAA	-23	NA	27935038	27956480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948
transcript_28576.known	chr11	+	1264	5	FSM	ENSG00000150455.14	ENST00000392678.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.08220700148449	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGCCTTGGTTTCCTC	-3	True	NA	17	True	CATAAA	-28	NA	126283109	126293244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126283154_126289664_126289834_126290461_126290586_126290802_126290962_126292476
transcript_28578.known	chr11	+	2189	5	FSM	ENSG00000150455.14	ENST00000392679.6	2189	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.87228132326901	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAATCAG	11	True	NA	NA	False	NA	NA	NA	126283092	126294933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126283154_126290461_126290586_126290802_126290962_126292476_126293056_126293667
transcript_2858.known	chr1	+	1913	8	FSM	ENSG00000130768.15	ENST00000548116.5	1913	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	119.061123043621	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTCCTTTTCTTTT	-9	True	NA	26	True	AAAACA	-25	NA	27935028	27959157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27935245_27945231_27945446_27948993_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_28585.known	chr11	-	416	2	FSM	ENSG00000255062.2	ENST00000524964.2	423	2	5	2	3	-2	multi-exon	FALSE	canonical	3	9	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTTTGAAGTGAATCG	-7	True	NA	-1	True	AATAAA	-38	NA	126304318	126294297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126294603_126304207
transcript_28586.known	chr11	-	1572	2	FSM	ENSG00000280832.2	ENST00000629441.2	1579	2	0	7	0	-7	multi-exon	FALSE	canonical	3	55	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACACAGGTGATCCTTT	1119	False	NA	NA	False	AATAAA	-15	NA	126355579	126340888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126342323_126355441
transcript_28589.known	chr11	+	5427	6	FSM	ENSG00000110063.10	ENST00000263579.5	5427	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	13.3356664625357	938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTTGGTTTTTTTGC	-2	True	NA	14	True	AATAAA	-24	NA	126304059	126350005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126304282_126306569_126306745_126331404_126331551_126338285_126338400_126343306_126343418_126345346
transcript_28592.known	chr11	+	1810	11	FSM	ENSG00000110080.20	ENST00000444328.7	1810	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	6.98856208386246	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGATGTCCTGTGT	-14	True	NA	21	True	ATTAAA	-21	NA	126355685	126414638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126355843_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413504_126413649_126413960
transcript_28596.known	chr11	-	5139	10	FSM	ENSG00000134954.14	ENST00000392668.8	5139	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	11.0732688918231	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGCTTTGGCTTGAT	0	True	NA	-7	True	ATTAAA	-22	NA	128587558	128458764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_128462577_128463508_128463628_128480190_128480452_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587487
transcript_2860.known	chr1	-	5885	17	FSM	ENSG00000158161.16	ENST00000540618.5	5885	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.4448033475711	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTGCTCCTGTGTCTT	-27	True	NA	-8	True	AATAAA	-14	NA	28088637	27970346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_28605.known	chr11	-	655	4	FSM	ENSG00000134954.14	ENST00000525404.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	41.3306450738701	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	62	False	NA	-3	True	AATAAA	-15	NA	128587542	128536411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_128536784_128556290_128556436_128573061_128573145_128587487
transcript_28609.nnic	chr11	+	874	2	Antisense	novelGene_ENSG00000134954.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGATTTACTAGGAGTG	NA	False	NA	NA	False	ATTAAA	-40	NA	128583077	128587083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_128583208_128586339
transcript_2861.known	chr1	-	1729	17	FSM	ENSG00000158161.16	ENST00000373863.3	1729	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.542019258881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGGCATTATTATCTC	7873	False	NA	NA	False	AATAAA	-16	NA	28088564	27977272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27977390_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_28611.nnic	chr11	+	925	2	Antisense	novelGene_ENSG00000134954.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGCTTTATTTCTTTGG	NA	False	NA	NA	False	AATAAA	-20	NA	128583077	128587134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_128583208_128586339
transcript_28613.nnic	chr11	+	979	2	Antisense	novelGene_ENSG00000134954.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGTTTCTGACAAGTAA	NA	False	NA	NA	False	NA	NA	NA	128583077	128587188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_128583208_128586339
transcript_28615.nnic	chr11	-	786	2	NNC	ENSG00000134954.14	novel	5139	10	NA	NA	-9	-10876	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTGCAAAATTCTTGAC	37	False	NA	NA	False	ATTAAA	-19	NA	128587567	128582683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_128583390_128587487
transcript_28616.nnic	chr11	-	697	2	NNC	ENSG00000134954.14	novel	5139	10	NA	NA	-197	-11153	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAATGAACAAACAA	NA	False	NA	NA	False	AAAAAG	-25	NA	128587755	128582960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_128583390_128587487
transcript_28617.known	chr11	-	3624	4	FSM	ENSG00000174370.12	ENST00000310799.9	3624	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCCTGTCTATAACC	330	False	NA	NA	False	AATAAA	-34	NA	128905697	128899564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_128902714_128903366_128903512_128904430_128904612_128905548
transcript_28618.known	chr11	-	609	4	FSM	ENSG00000174370.12	ENST00000524878.2	3609	4	9	2991	9	-2991	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCTCCTTGCCAATAG	NA	False	NA	NA	False	NA	NA	NA	128906035	128902556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_128902714_128903366_128903512_128904430_128904612_128905909
transcript_2862.known	chr1	-	1806	17	FSM	ENSG00000158161.16	ENST00000471498.5	1806	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	28.0417517953141	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCACCTATTATTTTCTA	13	True	NA	-19	True	AATAAA	-14	NA	28088597	27988478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27998283_27998352_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_28620.known	chr11	+	2205	6	FSM	ENSG00000151715.8	ENST00000281441.8	2205	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.748331477354788	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGGAGAGGAGGGGA	-3	True	NA	NA	False	NA	NA	NA	129815847	129860003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_129815899_129852474_129852661_129854609_129854817_129855707_129855893_129857312_129857459_129858573
transcript_28624.nic	chr11	-	1243	11	NIC	ENSG00000170322.15	novel	4114	27	NA	NA	-13	2156	combination_of_known_junctions	FALSE	canonical	3	21	junction_8	53.3400412448284	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	129895603	129882587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
transcript_28627.nic	chr11	-	1154	10	ISM	ENSG00000170322.15	ENST00000682444.1	5173	27	-25	18952	-13	2156	5prime_fragment	FALSE	canonical	3	80	junction_4	30.6086407553307	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	129895603	129882587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_28628.nic	chr11	-	1190	10	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-13	2156	combination_of_known_junctions	FALSE	canonical	3	50	junction_4	37.3154719177507	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	129895603	129882587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_2863.known	chr1	-	297	1	FSM	ENSG00000240750.3	ENST00000476501.3	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAATGTG	NA	False	NA	NA	False	NA	NA	NA	28032180	28031883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28031900_28032200
transcript_28632.nic	chr11	-	1085	9	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	0	2156	combination_of_known_junctions	FALSE	canonical	3	37	junction_8	49.4595794563601	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-14	True	NA	NA	False	AAAAAG	-13	NA	129895578	129882587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_28635.nic	chr11	-	810	6	NIC	ENSG00000170322.15	novel	568	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	65.5396063460866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCCTTCATGTCTGGTC	NA	False	NA	NA	False	AATAAA	-20	NA	129895603	129888312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_129888488_129888593_129888796_129892714_129892871_129893296_129893386_129894358_129894439_129895495
transcript_28636.nic	chr11	-	721	5	NIC	ENSG00000170322.15	novel	568	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	61.5182899632296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCCTTCATGTCTGGTC	NA	False	NA	NA	False	AATAAA	-20	NA	129895603	129888312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_129888488_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_28638.nic	chr11	-	823	4	ISM	ENSG00000170322.15	ENST00000682444.1	5173	27	-25	24681	-13	-4	5prime_fragment	FALSE	canonical	3	93	junction_2	32.1696889771861	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGTGCCCTTCATGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	129895603	129888316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_129888796_129892714_129892871_129894358_129894439_129895495
transcript_28640.known	chr11	-	539	3	FSM	ENSG00000170322.15	ENST00000526940.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCCTTCATGTCTGGTC	2688	False	NA	NA	False	AATAAA	-20	NA	129892876	129888312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_129888488_129888593_129888796_129892714
transcript_28642.nic	chr11	-	1785	4	ISM	ENSG00000170325.16	ENST00000531431.1	528	5	-64	6211	-14	-6211	5prime_fragment	FALSE	canonical	3	27	junction_1	2.94392028877595	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATTAAATTAAAAT	-11	True	NA	NA	False	NA	NA	NA	130002849	129954266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_129955572_129957745_129957911_129960895_129961083_130002721
transcript_28643.nic	chr11	-	1477	2	ISM	ENSG00000170325.16	ENST00000531431.1	528	5	-257	11871	-207	-11871	5prime_fragment	FALSE	canonical	3	34	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATTAGCCGGACATG	478	False	NA	NA	False	NA	NA	NA	130003042	129959926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_129961083_130002721
transcript_28644.known	chr11	+	3697	17	FSM	ENSG00000084234.18	ENST00000338167.10	3697	17	0	0	0	0	multi-exon	FALSE	canonical	3	1232	junction_7	579.067188324248	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	-2	True	NA	30	True	AATAAA	-15	NA	130069893	130144805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_28647.known	chr11	+	2530	16	FSM	ENSG00000084234.18	ENST00000528499.5	2530	16	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_6	457.491546977161	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	-2	True	NA	21	True	AATAAA	-28	NA	130069893	130143806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_2865.nnic	chr1	-	443	2	Genic_Genomic	ENSG00000228589.3	novel	681	1	NA	NA	17	15	multi-exon	FALSE	canonical	3	83	junction_1	0	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTTTCTCCTGGATCT	32	False	NA	NA	False	AATAAA	-20	NA	28096405	28095726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_28095989_28096224
transcript_28652.known	chr11	+	3305	19	FSM	ENSG00000149418.11	ENST00000278742.6	3305	19	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	21.6278855207523	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGTTTCTTTTCCTACT	-3	True	NA	27	True	AGTAAA	-19	NA	130159781	130210362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130160061_130188113_130188274_130188529_130188658_130188868_130188940_130189738_130189897_130190112_130190149_130190453_130190695_130194148_130194289_130194639_130194738_130196338_130196449_130196569_130196701_130197840_130197946_130198307_130198419_130198507_130198622_130198946_130199070_130199950_130200138_130208409_130208685_130209441_130209579_130209661
transcript_28653.known	chr11	-	7399	8	FSM	ENSG00000196323.14	ENST00000357899.9	7399	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.1896771906732	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGCTGTTGTTATTTA	21	False	130314938	-15	True	AATAAA	-2	NA	130314917	130226676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_130231716_130233307_130233383_130234155_130234274_130236792_130237094_130238443_130238608_130239811_130239897_130260855_130261930_130314374
transcript_2866.nnic	chr1	-	521	2	Genic_Genomic	ENSG00000228589.3	novel	681	1	NA	NA	-32	15	multi-exon	FALSE	canonical	3	91	junction_1	0	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTTTCTCCTGGATCT	NA	False	NA	NA	False	AATAAA	-20	NA	28096454	28095726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_28096018_28096224
transcript_28663.known	chr11	+	330	3	FSM	ENSG00000175773.14	ENST00000602310.2	348	3	11	7	11	-7	multi-exon	FALSE	canonical	2	2	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGAATCTGTCATTTTTA	4	True	NA	NA	False	AATATA	-18	NA	130315038	130315683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130315116_130315327_130315448_130315550
transcript_28664.nnic	chr11	-	951	3	Antisense	novelGene_ENSG00000175773.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTTGATTTAGATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	130383509	130370380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_130370956_130379339_130379573_130383366
transcript_28666.nnic	chr11	+	319	2	Genic_Genomic	ENSG00000175773.14	novel	669	6	NA	NA	-498	8410	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTGCTTCTCTGGAG	-1	True	NA	6	True	AATAAA	-19	NA	130314494	130324100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr11_+_130314604_130323890
transcript_2867.known	chr1	-	681	1	FSM	ENSG00000228589.3	ENST00000436160.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1011	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTCTAAAAGTAGCCCT	15	False	NA	NA	False	AATAAA	-5	NA	28096422	28095741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28095700_28096400
transcript_28672.known	chr11	-	15691	11	FSM	ENSG00000120451.11	ENST00000265909.9	15691	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	9.02274902676562	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTCCTAAATTGATT	-8	True	NA	-10	True	AGTAAA	-17	NA	130916479	130866249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_130878555_130879623_130879712_130880621_130880807_130903254_130903385_130905952_130906134_130906624_130906722_130907952_130908084_130910017_130910138_130910269_130910371_130911632_130911772_130914265
transcript_28683.nnic	chr11	+	731	3	NNC	ENSG00000231698.3	novel	998	2	NA	NA	0	-353	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTGTTTTGTTATT	NA	False	NA	13	True	NA	NA	NA	131253359	131300770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_131253592_131291592_131291679_131300357
transcript_2869.known	chr1	-	1539	2	FSM	ENSG00000169403.12	ENST00000305392.3	1539	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTTCTCCCCGATGGGG	4	True	NA	NA	False	TTTAAA	-4	NA	28193873	28149672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28151060_28193721
transcript_28692.nnic	chr11	+	458	2	Fusion	ENSG00000231698.3_ENSG00000182667.15	novel	998	2	NA	NA	-124	19872	multi-exon	FALSE	canonical	3	16	junction_1	0	406	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAAAAATCATG	NA	False	NA	NA	False	AAAAAG	-9	NA	131253235	131370789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_131253592_131370687
transcript_28693.known	chr11	+	584	2	FSM	ENSG00000231698.3	ENST00000416553.2	998	2	62	352	-24	-352	multi-exon	FALSE	canonical	3	175	junction_1	0	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTATTT	15	False	NA	14	True	NA	NA	NA	131253421	131300771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_131253592_131300357
transcript_28703.nic	chr11	+	2449	2	ISM	ENSG00000182667.15	ENST00000483174.1	684	3	-396	-1161	-396	-7	intron_retention	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTCACCTGGTGTGGTA	NA	False	NA	1	True	ATTAAA	-15	NA	132331847	132336814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_132332528_132335045
transcript_28704.nnic	chr11	-	313	2	Antisense	novelGene_ENSG00000182667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATTTATTTAAACTTA	NA	False	NA	2	True	AATAAA	-19	NA	131911626	131903392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_131903579_131911499
transcript_28708.known	chr11	-	4524	2	FSM	ENSG00000224795.3	ENST00000416725.2	4524	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGCCCTTAAGTTCTT	-5	True	NA	NA	False	AATAAA	-20	NA	131663583	131658309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_131662416_131663165
transcript_28709.nnic	chr11	+	1149	3	Antisense	novelGene_ENSG00000279189.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGTCTGACTGTGAGAA	NA	False	NA	NA	False	AATAAA	-16	NA	133302334	133305457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_133302421_133304083_133304153_133304463
transcript_28715.nnic	chr11	-	1316	4	NNC	ENSG00000080854.16	novel	904	3	NA	NA	-6459	262	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.49691252107735	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTTTGTTTCTTGG	NA	False	NA	NA	False	ACTAAA	-1	NA	133918821	133908301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_133909278_133911885_133912008_133918256_133918303_133918649
transcript_28716.nnic	chr11	-	1202	4	NNC	ENSG00000080854.16	novel	904	3	NA	NA	-6459	148	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.49691252107735	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAATTCTCCGTGTGTCT	NA	False	NA	-4	True	AAAACA	-17	NA	133918821	133908415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_133909278_133911885_133912008_133918256_133918303_133918649
transcript_28717.nnic	chr11	-	1054	4	NNC	ENSG00000080854.16	novel	904	3	NA	NA	-6459	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTTGCTCTCTGTGGT	NA	False	NA	0	True	NA	NA	NA	133918821	133908563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_133909278_133911885_133912008_133918256_133918303_133918649
transcript_28718.known	chr11	+	3765	9	FSM	ENSG00000166086.13	ENST00000299106.9	3765	9	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_8	17.6560011044404	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAACGCACATCATCA	2	True	NA	NA	False	NA	NA	NA	134069071	134152001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134069160_134139850_134139917_134140656_134140771_134144240_134144394_134144791_134144995_134145945_134146046_134148546_134148677_134148763_134148819_134149145
transcript_2872.known	chr1	-	1600	10	FSM	ENSG00000126698.11	ENST00000489277.5	1600	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_8	1079.58967971318	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTGATGTACTTTTC	0	True	NA	-25	True	AATAAA	-12	NA	28233025	28200558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28230130_28230253_28232920
transcript_28722.known	chr11	+	3363	8	FSM	ENSG00000166086.13	ENST00000441717.3	3363	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	72.0628976970105	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGCTTCATTCTTTG	1	True	NA	28	True	TATAAA	-17	NA	134069070	134151751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134069160_134139850_134139917_134140656_134140771_134144791_134144995_134145945_134146046_134148546_134148677_134148763_134148819_134149145
transcript_28735.known	chr11	-	893	8	FSM	ENSG00000151500.15	ENST00000392595.6	893	8	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_1	313.602504154933	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	1478	False	NA	-18	True	AATAAA	-18	NA	134253248	134248278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_28736.known	chr11	-	943	8	FSM	ENSG00000151500.15	ENST00000392594.7	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_7	523.318804772551	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-29	True	NA	-18	True	AATAAA	-18	NA	134253370	134248278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_28745.known	chr11	-	835	7	FSM	ENSG00000151500.15	ENST00000352327.5	835	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	539.303563249246	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-9	True	NA	21	True	AATAAA	-9	NA	134253350	134248287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_28746.nic	chr11	-	807	7	NIC	ENSG00000151500.15	novel	835	7	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	361	junction_6	686.118490738541	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-53	True	NA	21	True	AATAAA	-9	NA	134253394	134248287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_28754.known	chr11	-	926	6	FSM	ENSG00000151500.15	ENST00000531135.5	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	1204	junction_5	266.742872444607	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGGTGGCCCCTTAAA	-12	True	NA	NA	False	NA	NA	NA	134253353	134248881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_28758.known	chr11	-	1304	7	FSM	ENSG00000151500.15	ENST00000341541.8	1304	7	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_1	297.467458537718	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTTCTTCTAAAACCA	-11	True	NA	-21	True	AATAAA	-15	NA	134253352	134248281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_28762.nic	chr11	+	2458	11	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-34	-116	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	119.906797138444	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAATAATTGATACCCTCC	NA	False	NA	4	True	ATTAAA	-20	NA	134253513	134263945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134262769
transcript_28763.nic	chr11	+	1615	11	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-34	144	combination_of_known_junctions	FALSE	canonical	3	33	junction_10	119.906797138444	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATCTTCTTGGTAGTC	NA	False	NA	10	True	AATAAA	-17	NA	134253513	134263102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134262769
transcript_28764.known	chr11	+	2176	11	FSM	ENSG00000151498.12	ENST00000281182.9	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_10	38.4088531461172	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	6	True	NA	39	True	AATAAA	-28	NA	134253567	134265855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_28769.nic	chr11	+	2060	10	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_2	123.226079490774	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	NA	False	NA	39	True	AATAAA	-28	NA	134253513	134265855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_28772.known	chr11	+	1797	8	FSM	ENSG00000151498.12	ENST00000374752.6	1797	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	142.810420931144	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	-1	True	NA	34	True	AATAAA	-23	NA	134253560	134265850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_28773.nic	chr11	+	928	7	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-34	24	combination_of_known_junctions	FALSE	canonical	3	23	junction_6	151.416001649613	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGGGTATTTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	134253513	134260164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134260028
transcript_28776.known	chr11	+	3315	10	FSM	ENSG00000151498.12	ENST00000531338.5	3315	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	171.809325836651	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	1408	False	NA	34	True	AATAAA	-23	NA	134256582	134265850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262131_134263556_134264907
transcript_28777.known	chr11	+	509	2	FSM	ENSG00000151498.12	ENST00000525961.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAGTTTTTACAGGACC	2	True	NA	NA	False	AATAAA	-20	NA	134253563	134256910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134253710_134256547
transcript_28783.nnic	chr11	-	1763	2	Genic_Genomic	ENSG00000289399.1	novel	922	1	NA	NA	-76	3251	multi-exon	FALSE	canonical	3	10	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCTTTACAGTTCAATA	-44	True	NA	-1	True	AATAAA	-22	NA	134276277	134272028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr11_-_134272699_134275184
transcript_28788.known	chr11	+	3566	10	FSM	ENSG00000166105.16	ENST00000389887.9	3566	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_9	51.7365119298418	1200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGAGTATGCTTCTTAC	NA	False	NA	NA	False	AATAAA	-15	NA	134274244	134305308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134305114
transcript_28789.nnic	chr11	+	3053	20	NNC	ENSG00000149328.15	novel	3251	19	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_19	20.2595348777459	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	-14	True	NA	20	True	AGTAAA	-20	NA	134331982	134376324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375745_134375947
transcript_28791.known	chr11	+	3152	20	FSM	ENSG00000149328.15	ENST00000339772.9	3152	20	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_19	20.2595348777459	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCCCTCTGGTGATAGT	NA	False	NA	17	True	AGTAAA	-17	NA	134331873	134376321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971_134375885_134376094
transcript_28792.known	chr11	+	3251	19	FSM	ENSG00000149328.15	ENST00000535456.7	3251	19	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_10	17.1276975887408	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGGTGATAGTCTC	-9	True	NA	20	True	AGTAAA	-20	NA	134331987	134376324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134347324_134347434_134356300_134356394_134359059_134359142_134364327_134364399_134367256_134367342_134368643_134368782_134369804_134369886_134370292_134370400_134371007_134371149_134371420_134371493_134371751_134371831_134373720_134373809_134374144_134374257_134374601_134374719_134374971
transcript_28796.known	chr11	+	864	3	FSM	ENSG00000255545.8	ENST00000657630.1	864	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGAGTGAAACGCGCA	3173	False	NA	NA	False	ATTAAA	-16	NA	134412283	134439007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134412339_134436482_134436785_134438500
transcript_28798.known	chr11	+	762	2	FSM	ENSG00000255327.1	ENST00000528497.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGACTCGCTCTTTCTT	NA	False	NA	NA	False	AATATA	-14	NA	134950707	134951568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134951298_134951396
transcript_28799.nnic	chr12	-	1599	10	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	567	0	at_least_one_novel_splicesite	TRUE	canonical	3	35	junction_9	76.8362054576864	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	NA	False	NA	NA	False	AATAAA	-12	NA	31448	14521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_14945_15084_15154_15912_16066_16721_16881_16968_17171_17347_17484_17722_17860_18036_18184_18372_18472_31374
transcript_28816.known	chr12	+	2701	13	FSM	ENSG00000120645.12	ENST00000382841.2	2701	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.8124228384477	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTGTTCCAGCGCCTA	NA	False	NA	NA	False	ATTAAA	-22	NA	77375	171330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_77713_99145_99215_138266_139355_141123_141286_157024_157148_157527_157695_161925_162066_163493_163620_165433_165534_165728_165891_169012_169106_171111_171162_171246
transcript_28818.known	chr12	-	586	2	FSM	ENSG00000256948.1	ENST00000540226.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGTTTCTGTCCCTAA	NA	False	NA	NA	False	AATAAA	-17	NA	111850	106523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106878_111618
transcript_28819.known	chr12	-	2188	15	FSM	ENSG00000010379.16	ENST00000343164.9	2188	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.257539376818856	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTAGCGGTTCTGTCTGA	-1	True	NA	NA	False	ATTAAA	-20	NA	262836	220621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_221071_221375_221547_222531_222633_223131_223235_223991_224130_224400_224514_226389_226515_227564_227669_235089_235225_237157_237291_237925_238011_242613_242755_243678_243814_259850_260058_262788
transcript_28820.nic	chr12	-	3800	22	ISM	ENSG00000073614.13	ENST00000399788.7	10701	28	-281	29834	-281	0	5prime_fragment	FALSE	canonical	3	40	junction_14	10.7728557851996	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAGAAAAAGAAAAGG	NA	False	NA	NA	False	AGTAAA	-10	NA	389601	309890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_309965_310884_311065_313055_313195_318105_318462_320994_321110_322416_322568_323081_323207_323599_323782_328834_329030_331818_331939_333486_333650_334240_334423_350620_350780_352204_352325_354075_354235_355157_355250_356431_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
transcript_28821.nic	chr12	-	1278	6	ISM	ENSG00000073614.13	ENST00000399788.7	10701	28	-281	76385	-281	9528	5prime_fragment	FALSE	canonical	3	50	junction_1	5.23832034148352	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAAGAAGGTAAAATTTG	NA	False	NA	NA	False	GGGGCT	-37	NA	389601	356441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_356538_362962_363098_365933_366105_384030_384154_385896_385975_388926
transcript_28824.known	chr12	-	575	4	FSM	ENSG00000073614.13	ENST00000543507.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.8824602048746	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCTCATACTGGTTTA	14	True	NA	NA	False	NA	NA	NA	389273	384030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_384154_385896_385975_387247_387275_388926
transcript_28827.known	chr12	+	2300	13	FSM	ENSG00000120647.10	ENST00000239830.9	2300	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	32.9882133833013	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	-6	True	NA	15	True	AATAAA	-16	NA	401643	442642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_2883.known	chr1	-	1763	9	FSM	ENSG00000126698.11	ENST00000263697.6	1763	9	0	0	0	0	multi-exon	FALSE	canonical	3	2334	junction_2	229.588218338834	4125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCCAGCTCACAGTCTAT	-4	True	NA	-13	True	ATTAAA	-18	NA	28233029	28200277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_28833.known	chr12	+	2338	12	FSM	ENSG00000120647.10	ENST00000422000.5	2338	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.9550409280737	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTTCTTTGAGTTT	1	True	NA	11	True	AATAAA	-12	NA	389349	442638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_389487_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_28835.known	chr12	+	2253	12	FSM	ENSG00000120647.10	ENST00000412006.6	2253	12	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	26.9084766514658	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	-13	True	NA	15	True	AATAAA	-16	NA	401636	442642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_401685_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_28837.known	chr12	+	1652	11	FSM	ENSG00000120647.10	ENST00000540180.5	1652	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.2748311720313	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTGACTAGAGT	-1	True	NA	NA	False	NA	NA	NA	389347	442004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_389487_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_28847.nic	chr12	+	1570	10	ISM	ENSG00000120647.10	ENST00000239830.9	2300	13	-53	3723	-46	308	5prime_fragment	FALSE	canonical	3	63	junction_2	37.7539140314135	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAGCTGAGCA	3687	False	NA	NA	False	AATACA	-7	NA	401590	438919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334
transcript_28862.known	chr12	+	368	2	FSM	ENSG00000120647.10	ENST00000537453.1	368	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	389272	390125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_389487_389971
transcript_28863.known	chr12	+	5493	20	FSM	ENSG00000139044.12	ENST00000266383.10	5493	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	24.0764019362094	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTTGTCTTTTCCTGTT	-19	True	NA	NA	False	ATTAAA	-28	NA	459938	563509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_460546_535165_535270_536217_536296_544338_544435_544881_544973_545368_545470_546645_546714_548023_548103_548230_548298_549768_549913_550921_551032_552062_552164_552466_552529_553193_553984_556546_556867_557607_557762_558015_558089_558507_558662_559294_559422_561342
transcript_28865.known	chr12	-	670	4	FSM	ENSG00000171840.13	ENST00000542920.1	670	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.49443825784929	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTCCCTACCCACAGCA	NA	False	NA	NA	False	NA	NA	NA	643665	564580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_564682_565216_565402_565949_566179_643510
transcript_28866.known	chr12	+	1035	3	FSM	ENSG00000177406.5	ENST00000543884.2	1035	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTTTTAGAAAGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	642673	664142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_642739_643958_644103_663316
transcript_28867.nic	chr12	+	1186	7	ISM	ENSG00000060237.19	ENST00000530271.6	11804	31	1200	50316	1067	0	5prime_fragment	FALSE	canonical	3	24	junction_1	9.79370546150264	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCAGGAAGAGAGCAG	61	False	NA	NA	False	AAGAAA	-3	NA	754122	861135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_754325_813641_813815_827041_827263_830002_830161_857160_857250_859244_859465_861012
transcript_28872.known	chr12	-	501	3	FSM	ENSG00000250132.6	ENST00000539259.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATAAACTGCTTGTAC	NA	False	NA	NA	False	NA	NA	NA	991190	976978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_977107_989808_990042_991050
transcript_28873.known	chr12	-	569	3	FSM	ENSG00000250132.6	ENST00000545629.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTACTGCAGGAAGA	2	True	NA	NA	False	AAAAAG	-15	NA	991122	976803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_977068_989808_990042_991050
transcript_28880.known	chr12	+	3971	8	FSM	ENSG00000006831.10	ENST00000357103.5	3971	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	19.0316599810067	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	21	True	NA	NA	False	AATAAA	-16	NA	1691069	1788674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_1691192_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_28884.known	chr12	-	575	3	FSM	ENSG00000151062.15	ENST00000543405.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGGTGATAGGTGCATC	3199	False	NA	NA	False	NA	NA	NA	1797557	1795059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1795382_1795667_1795781_1797417
transcript_28886.known	chr12	-	2033	9	FSM	ENSG00000151065.14	ENST00000280665.11	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	27.0774352552083	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTTTTTTAATTAT	-3	True	NA	-3	True	AGTAAA	-23	NA	2004457	1946052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_28887.known	chr12	-	598	6	FSM	ENSG00000151065.14	ENST00000537725.1	598	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	84.1465388474178	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAGTACAGGAACCCTT	27	True	NA	NA	False	NA	NA	NA	2004427	1961315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1961396_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_2889.known	chr1	+	503	3	FSM	ENSG00000130770.18	ENST00000335514.10	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	3693	junction_2	175	49191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGATGCCTTCTTC	-15	True	NA	15	True	AATAAA	-15	NA	28236123	28238100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28236271_28236360_28236453_28237836
transcript_28890.known	chr12	-	2231	3	FSM	ENSG00000151065.14	ENST00000535873.2	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTTGTATTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	2004535	1991455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1993392_1997934_1997976_2004281
transcript_28895.nnic	chr12	-	727	3	NNC	ENSG00000151065.14	novel	2033	9	NA	NA	-22	-5658	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	113.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTTATCAGATATTA	NA	False	NA	NA	False	AATAAA	-17	NA	2004557	1997113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_1997524_1997934_1997976_2004281
transcript_2890.known	chr1	+	599	3	FSM	ENSG00000130770.18	ENST00000497986.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2021.5	3433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGCCTTCTTCTATCT	-30	True	NA	20	True	AATAAA	-20	NA	28236108	28238105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28236271_28236360_28236453_28237760
transcript_28900.nnic	chr12	-	901	4	Fusion	ENSG00000256271.1_ENSG00000246627.6	novel	609	2	NA	NA	-4	0	multi-exon	FALSE	canonical	0	0	junction_3	6.53197264742181	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	-5	True	NA	NA	False	ATTAAA	-20	NA	2691161	2668499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_2669017_2672128_2672247_2690806_2690980_2691068
transcript_28902.nnic	chr12	-	1013	3	Fusion	ENSG00000256271.1_ENSG00000246627.6	novel	609	2	NA	NA	16	0	intron_retention	FALSE	canonical	2	8	junction_2	4	107	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	655	False	NA	NA	False	ATTAAA	-20	NA	2691184	2668499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_2669017_2672128_2672247_2690806
transcript_28904.known	chr12	-	609	2	FSM	ENSG00000256271.1	ENST00000545526.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	2672220	2668499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2669017_2672128
transcript_2891.known	chr1	+	1855	2	FSM	ENSG00000130770.18	ENST00000465645.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	4043	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTTGATGCCTTCT	15	True	NA	13	True	AATAAA	-13	NA	28236153	28238098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28236271_28236360
transcript_28912.known	chr12	+	2320	12	FSM	ENSG00000111203.13	ENST00000228799.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_11	14.9743582486422	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCAGTGTAGGTA	-5	True	NA	18	True	AATAAA	-24	NA	2812667	2825076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_2892.known	chr1	+	539	3	FSM	ENSG00000130770.18	ENST00000468425.2	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_2	1975.5	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGATTGATTGATTGA	3	True	NA	NA	False	AATAAA	-34	NA	28236141	28246906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28236271_28236360_28236453_28246588
transcript_28920.known	chr12	+	1951	12	FSM	ENSG00000078246.17	ENST00000397132.6	1951	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	47.2622365982024	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATGTGTCACTGCC	20	False	NA	4	True	AATAAA	-11	NA	2890906	2941130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310_2939425_2940529
transcript_28926.known	chr12	+	3080	11	FSM	ENSG00000078246.17	ENST00000448120.7	3080	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	23.8067217398784	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTGCCTTTGCAAG	4	True	NA	12	True	AATAAA	-19	NA	2890890	2941138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
transcript_28929.known	chr12	+	3715	10	FSM	ENSG00000004478.8	ENST00000001008.6	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	1212	junction_3	53.5864364633394	2205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACAAGTCTTTCAGCC	-30	True	NA	16	True	ATTAAA	-29	NA	2794969	2805423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2795245_2797137_2797283_2797728_2797872_2798705_2798827_2799087_2799245_2799849_2799941_2800038_2800123_2800391_2800578_2801116_2801357_2803150
transcript_2893.known	chr1	+	3462	10	FSM	ENSG00000130766.5	ENST00000253063.4	3462	10	0	0	0	0	multi-exon	TRUE	canonical	3	168	junction_4	22.7254140654124	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTTTTATGGGCTGTT	3	True	NA	25	True	AATAAA	-25	NA	28259517	28282491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28259938_28269182_28269249_28271673_28271872_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_28938.known	chr12	+	1419	9	FSM	ENSG00000111203.13	ENST00000537851.5	1419	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	37.6264534602984	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAACAGAGACTTGTT	12	True	NA	NA	False	NA	NA	NA	2812684	2824502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2812857_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_28942.known	chr12	+	1229	9	FSM	ENSG00000078246.17	ENST00000538354.5	1229	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	63.9129046046258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTCTGAATATATAAAAC	4	True	NA	NA	False	NA	NA	NA	2890890	2939560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2890989_2909528_2909581_2922261_2922403_2930247_2930346_2931036_2931241_2934446_2934562_2937630_2937730_2938113_2938286_2939310
transcript_2895.nnic	chr1	+	1097	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	-40	True	NA	11	True	AATAAA	-14	NA	28329016	28335965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28334820_28335574
transcript_28952.known	chr12	+	587	4	FSM	ENSG00000111203.13	ENST00000541659.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	2.49443825784929	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAATTGCTGCCCTCCT	88	False	NA	NA	False	AATAAA	-4	NA	2812760	2818458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105
transcript_2896.nnic	chr1	+	1056	4	NNC	ENSG00000130772.14	novel	1106	4	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAATTCTGATTC	-31	True	NA	13	True	AATAAA	-16	NA	28329025	28335967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28334920_28335708
transcript_28961.known	chr12	+	1655	3	FSM	ENSG00000171792.11	ENST00000461997.5	1655	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	162.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGACATAGATGAGTTCT	-26	True	NA	-17	True	NA	NA	NA	2877198	2889271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2877283_2885282_2885493_2887910
transcript_28966.known	chr12	+	1926	3	FSM	ENSG00000171792.11	ENST00000489288.7	1926	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	19	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGGACCTACTGTGT	-2	True	NA	9	True	ATTAAA	-20	NA	2877222	2889524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2877283_2885282_2885535_2887910
transcript_2897.known	chr1	+	1106	4	FSM	ENSG00000130772.14	ENST00000398997.2	1106	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.7521042876493	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCTGTGTAATTCTGA	-2	True	NA	10	True	AATAAA	-13	NA	28329054	28335964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28329181_28330596_28330736_28334416_28335087_28335793
transcript_28970.known	chr12	+	583	3	FSM	ENSG00000171792.11	ENST00000538636.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	199.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCCCAAAGCTGTGGGA	-26	True	NA	NA	False	NA	NA	NA	2877198	2888137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2877283_2885262_2885535_2887910
transcript_28975.known	chr12	-	347	2	FSM	ENSG00000258325.2	ENST00000552469.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGATGGTTGCAAGGATT	536	False	NA	-17	True	ATTAAA	-15	NA	2812381	2805133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2805318_2812218
transcript_28976.known	chr12	+	1605	2	FSM	ENSG00000171792.11	ENST00000464682.2	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	-17	True	NA	-5	True	NA	NA	NA	2877207	2889440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2877283_2887910
transcript_28981.known	chr12	-	442	2	FSM	ENSG00000258325.2	ENST00000547794.2	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGTTGCAAGGATTCAG	101	False	NA	-14	True	ATTAAA	-18	NA	2812816	2805130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2805318_2812561
transcript_28982.known	chr12	+	1008	1	FSM	ENSG00000171792.11	ENST00000623153.1	1008	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTAATGGTCTTTGTTT	NA	False	NA	8	True	AATACA	-15	NA	2888000	2889008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2888000_2889000
transcript_28983.known	chr12	-	99	1	FSM	ENSG00000252996.1	ENST00000517187.1	99	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	5707	False	NA	NA	False	ATTAAA	-3	NA	2954338	2954239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2954200_2954300
transcript_28985.known	chr12	+	1710	13	FSM	ENSG00000197905.10	ENST00000359864.8	1710	13	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	28.2999803690548	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGGCTGTGTGAGC	-8	True	NA	23	True	AATAAA	-28	NA	2959396	3040676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_28988.nic	chr12	+	2005	13	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	73.4194097103908	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	-1	True	NA	12	True	AATAAA	-17	NA	2959403	3040665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_2959482_2959947_2960354_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_28989.nnic	chr12	+	1674	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	71.1938338865879	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	14	True	NA	12	True	AATAAA	-17	NA	2959328	3040665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_2899.nnic	chr1	+	1311	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	-47	True	NA	11	True	AATAAA	-14	NA	28329009	28335965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335161_28335708
transcript_28990.known	chr12	+	1637	12	FSM	ENSG00000197905.10	ENST00000358409.7	1637	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	75.1634032630418	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	15	False	NA	12	True	AATAAA	-17	NA	2959329	3040665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_28991.nic	chr12	+	1500	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	79.5412466419491	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	-2	True	NA	12	True	AATAAA	-17	NA	2959340	3040665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_2959482_2959947_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_28997.known	chr12	+	1396	11	FSM	ENSG00000197905.10	ENST00000397122.6	1396	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	82.4706614499969	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCTGGTCTGGCTGTG	4	True	NA	18	True	AATAAA	-23	NA	2959916	3040671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_28998.known	chr12	+	4322	9	FSM	ENSG00000011105.14	ENST00000011898.10	4322	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.67890834580027	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTGTCTCTCAGTG	-6	True	NA	21	True	AATAAA	-23	NA	3077378	3286559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_29.known	ERCC-00069	+	1121	1	FSM	ERCC-00069A	DQ459421	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00069_+_0_1100
transcript_2900.nnic	chr1	+	1475	4	NNC	ENSG00000130772.14	novel	1106	4	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAATTCTGATTC	-31	True	NA	13	True	AATAAA	-16	NA	28329025	28335967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335205_28335574
transcript_29001.known	chr12	+	4284	8	FSM	ENSG00000011105.14	ENST00000537971.5	4284	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	12.6700675706524	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTCTCTCAGTGGTGTG	NA	False	NA	26	True	AATAAA	-28	NA	3077354	3286564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_3077454_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_29004.known	chr12	-	255	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1836	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	31	False	NA	NA	False	NA	NA	NA	3211917	3211662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3211700_3211900
transcript_29010.nic	chr12	-	728	2	FSM	ENSG00000250770.4	ENST00000686448.1	680	2	-54	6	-5	-6	multi-exon	FALSE	canonical	1	5	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTAGATTCTATTAGTTC	NA	False	NA	-1	True	AATAAA	-15	NA	3366166	3331772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3332393_3366058
transcript_2902.nnic	chr1	+	1562	4	NNC	ENSG00000130772.14	novel	1106	4	NA	NA	18	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.7521042876493	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAATTCTGATTC	-37	True	NA	13	True	AATAAA	-16	NA	28329019	28335967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335286_28335574
transcript_29022.known	chr12	-	2428	10	FSM	ENSG00000111224.14	ENST00000416739.5	2428	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.7051331231004	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGACAACAAC	7900	False	NA	NA	False	AATATA	-34	NA	3873436	3791046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3792174_3798658_3798837_3806887_3807104_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3873211
transcript_29027.nic	chr12	-	1525	9	NIC	ENSG00000111224.14	novel	1197	9	NA	NA	-11	156	combination_of_known_junctions	FALSE	canonical	3	36	junction_5	25.611276813154	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTTTTTGTTGTTTTG	7877	False	NA	NA	False	TATAAA	-19	NA	3873459	3811966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3863835_3863958_3873211
transcript_29035.known	chr12	-	4449	8	FSM	ENSG00000111224.14	ENST00000228820.9	4449	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	26.2344220054337	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-4	True	NA	-20	True	ATTAAA	-18	NA	3873399	3808860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3873211
transcript_29036.known	chr12	-	4406	8	FSM	ENSG00000111224.14	ENST00000427057.6	4406	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	21.2526108840245	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	5	True	NA	-20	True	ATTAAA	-18	NA	3873355	3808860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3863835_3863958_3873211
transcript_29040.known	chr12	-	4299	7	FSM	ENSG00000111224.14	ENST00000458162.6	4299	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	19.8074060223274	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-10	True	NA	-20	True	ATTAAA	-18	NA	3873370	3808860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3873211
transcript_29046.known	chr12	-	539	4	FSM	ENSG00000111224.14	ENST00000450737.2	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	4.18993502999218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCTTGTGGCTCCAT	7894	False	NA	NA	False	AAAAAG	-8	NA	3873442	3828973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3829031_3829889_3830019_3863835_3863958_3873211
transcript_29055.nic	chr12	+	690	2	ISM	ENSG00000256969.2	ENST00000669712.1	903	4	5985	0	-2090	0	3prime_fragment	FALSE	canonical	3	6	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	6997	False	NA	19	True	AATAAA	-19	NA	4018886	4026658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_4019140_4026221
transcript_29056.known	chr12	+	438	2	FSM	ENSG00000256969.2	ENST00000536141.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCCGAAGTTAAAGCT	2386	False	NA	-26	True	NA	NA	NA	4025984	4026613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4026031_4026221
transcript_29057.known	chr12	+	542	2	FSM	ENSG00000256969.2	ENST00000543206.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	2041	False	NA	19	True	AATAAA	-19	NA	4020976	4026658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4021082_4026221
transcript_29058.known	chr12	+	3435	12	FSM	ENSG00000285901.2	ENST00000648100.1	3435	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	341.862908098969	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAATCCTTTTTCCTGT	1	True	NA	NA	False	NA	NA	NA	4273761	4405490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259_4353622_4365659_4365782_4366130_4366283_4405039
transcript_29059.known	chr12	+	6493	5	FSM	ENSG00000118971.9	ENST00000261254.8	6493	5	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_3	26.3106442338457	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGGCCGTTTTTGACT	1	True	NA	21	True	AATAAA	-17	NA	4273761	4305353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4274236_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_2906.known	chr1	+	1829	3	FSM	ENSG00000130772.14	ENST00000373842.9	1829	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	-17	True	NA	11	True	AATAAA	-14	NA	28329039	28335965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28329181_28330596_28330736_28334416
transcript_29061.known	chr12	+	6135	5	FSM	ENSG00000118971.9	ENST00000675468.1	6135	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	366.831279336973	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATCTGGCCGTTTTTG	338	False	NA	18	True	AATAAA	-14	NA	4275548	4305350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4275668_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_29062.nic	chr12	+	1180	4	ISM	ENSG00000118971.9	ENST00000675880.1	6532	6	-121	19867	-121	7	5prime_fragment	FALSE	canonical	2	5	junction_3	399.754369026225	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTTTCTCCCACCTAA	767	False	NA	NA	False	NA	NA	NA	4273640	4285483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_4274236_4276004_4276221_4278759_4278920_4285274
transcript_29068.known	chr12	-	1374	2	FSM	ENSG00000255920.4	ENST00000656828.1	1374	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACACATATGTCCACAGT	0	True	NA	NA	False	NA	NA	NA	4275456	4247980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4249194_4275295
transcript_29069.known	chr12	-	621	2	FSM	ENSG00000255920.4	ENST00000663068.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTATTTATTTTT	NA	False	NA	-6	True	AATAAA	-15	NA	4276252	4248766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4249194_4276058
transcript_29070.known	chr12	+	322	2	FSM	ENSG00000118971.9	ENST00000541542.1	322	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATCTGTGTTTCTCC	2679	False	NA	NA	False	NA	NA	NA	4278799	4285476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4278920_4285274
transcript_29072.known	chr12	+	8209	6	FSM	ENSG00000078237.7	ENST00000179259.6	8209	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	9.86711710683521	884	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	-22	True	NA	NA	False	ATTAAA	-19	NA	4321212	4360028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4321304_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259
transcript_29076.known	chr12	-	3002	3	FSM	ENSG00000118972.3	ENST00000237837.2	3002	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTAACCCTAAAGTGTT	-3	True	NA	NA	False	NA	NA	NA	4379712	4368226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4370784_4372593_4372698_4379371
transcript_29078.known	chr12	-	2168	14	FSM	ENSG00000047621.12	ENST00000545746.5	2168	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	13.5964666485614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTACTTTCTTTG	-31	True	NA	NA	False	ATTAAA	-14	NA	4538508	4489414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536212_4538408
transcript_29090.known	chr12	-	561	3	FSM	ENSG00000047621.12	ENST00000535030.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCTATAATGTATATG	-31	True	NA	NA	False	NA	NA	NA	4538508	4534044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4534303_4536016_4536220_4538408
transcript_29092.known	chr12	+	2235	11	FSM	ENSG00000111247.15	ENST00000442992.6	2235	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	181.299310533714	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGATTAAAGTGAGC	14	True	NA	2	True	NA	NA	NA	4538889	4560018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543912_4545218_4545313_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_29096.known	chr12	+	2163	10	FSM	ENSG00000111247.15	ENST00000228843.13	2163	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	157.558768185394	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	14	True	NA	31	True	ATTAAA	-16	NA	4538889	4560047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_29108.known	chr12	+	2112	9	FSM	ENSG00000111247.15	ENST00000352618.9	2112	9	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_7	58.3501017565522	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	14	True	NA	31	True	ATTAAA	-16	NA	4538889	4560047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_29120.known	chr12	+	787	8	FSM	ENSG00000111247.15	ENST00000544927.5	787	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	141.902380932406	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGCCACTAGCACC	54	False	NA	NA	False	NA	NA	NA	4538929	4558970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553090_4558856
transcript_29121.nic	chr12	+	2088	8	NIC	ENSG00000111247.15	novel	2112	9	NA	NA	-36	-2	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	143.231936924354	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTGTTGTACACTTCT	NA	False	NA	29	True	ATTAAA	-14	NA	4538761	4560045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4558856
transcript_29125.nic	chr12	+	2058	8	NIC	ENSG00000111247.15	novel	2112	9	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	143.609589811107	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	-42	True	NA	31	True	ATTAAA	-16	NA	4538833	4560047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_4538957_4541883_4541934_4543762_4543905_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_29135.known	chr12	+	567	6	FSM	ENSG00000111247.15	ENST00000544110.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	174.633788254163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTATGAGAAAAAGTAAA	7	True	NA	NA	False	NA	NA	NA	4538882	4553039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543912_4548091_4548179_4548686_4548837_4552982
transcript_29149.known	chr12	+	8356	11	FSM	ENSG00000139180.11	ENST00000266544.10	8356	11	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_5	46.3237520069348	3707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTGAGAGCTGCAATT	-10	True	NA	NA	False	AATAAA	-28	NA	4649113	4694317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4686937
transcript_2915.known	chr1	+	6048	14	FSM	ENSG00000204138.13	ENST00000373839.8	6048	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	15.7254551866839	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	44	True	NA	18	True	ATTAAA	-25	NA	28369739	28500364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
transcript_29156.nic	chr12	+	938	4	NIC	ENSG00000010219.14	novel	1840	12	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	14.522013940528	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCATGACTCCTCTTATG	NA	False	NA	40	True	CATAAA	-35	NA	4604831	4613888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_4605087_4610154_4610285_4612542_4612719_4613511
transcript_29157.known	chr12	+	855	4	FSM	ENSG00000010219.14	ENST00000545571.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	14.8996644257513	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACATGGCCAATTGGC	-32	True	NA	25	True	CATAAA	-20	NA	4604896	4613873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4605087_4610154_4610285_4612542_4612719_4613514
transcript_29163.known	chr12	+	782	3	FSM	ENSG00000139180.11	ENST00000544679.1	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_1	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATGAAATGTGGCTAGT	-5	True	NA	NA	False	NA	NA	NA	4649118	4655378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4649176_4654291_4654463_4654824
transcript_29164.known	chr12	-	1249	4	FSM	ENSG00000255474.1	ENST00000527518.1	1249	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAAACTGTTGATTCTCC	NA	False	NA	NA	False	AATAAA	-38	NA	4720102	4700416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4701180_4703312_4703441_4704177_4704298_4719864
transcript_29170.nnic	chr12	+	772	4	NNC	ENSG00000130035.9	novel	283	3	NA	NA	-239	109	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.2361043360417	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGTGCATTATGCCAT	NA	False	NA	6	True	AATAAA	-18	NA	4763728	4851112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_4763862_4763951_4764048_4765378_4765547_4850737
transcript_29172.known	chr12	+	1632	2	FSM	ENSG00000130035.9	ENST00000541339.2	1632	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTTAATACATACGGTT	322	False	NA	NA	False	AATAAA	-17	NA	4814336	4851927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4814779_4850737
transcript_29178.known	chr12	+	1341	2	FSM	ENSG00000185652.12	ENST00000423158.4	1341	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTCAGAGTTGTGTA	-3	True	NA	NA	False	AGTAAA	-14	NA	5432107	5495299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_5432343_5494193
transcript_29180.known	chr12	+	1028	1	FSM	ENSG00000185652.12	ENST00000331010.7	1028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGGCCTCTCCCATCTG	46	False	NA	NA	False	AATAAA	-19	NA	5494131	5495159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_5494100_5495200
transcript_29181.known	chr12	-	8830	52	FSM	ENSG00000110799.14	ENST00000261405.10	8830	52	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_43	102.706780761069	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGGTGCACTGTGTC	-1	True	NA	-4	True	AATAAA	-24	NA	6124670	5948876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_5949204_5949785_5949884_5951843_5951884_5952390_5952520_5953495_5953595_5967485_5967603_5968126_5968168_5969210_5969392_5971598_5971710_5976110_5976261_5981785_5981992_5983149_5983255_5985044_5985120_5985562_5985666_5991818_5992019_5993861_5994204_5994414_5994608_5996001_5996223_6011616_6011795_6012086_6012131_6013480_6013646_6016088_6016233_6016515_6016657_6016753_6016871_6018364_6019744_6021899_6022036_6022739_6022899_6023630_6023788_6025579_6025694_6025905_6026047_6029341_6029489_6031443_6031579_6034687_6034827_6036387_6036492_6044290_6044452_6046722_6046818_6052542_6052784_6056856_6057073_6057848_6058045_6062953_6063055_6064245_6064385_6065136_6065274_6071296_6071344_6072330_6072443_6073618_6073742_6075334_6075552_6095459_6095585_6110373_6110583_6110865_6110969_6121173_6121339_6123141_6123197_6124420
transcript_29182.nnic	chr12	-	854	6	NNC	ENSG00000110799.14	novel	8830	52	NA	NA	3066	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	151.962363761558	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGGTGCACTGTGTC	6475	False	NA	-4	True	AATAAA	-24	NA	5965148	5948876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_5949204_5949785_5949884_5951843_5951884_5952390_5952520_5953495_5953595_5964987
transcript_29183.nic	chr12	-	1410	6	ISM	ENSG00000110799.14	ENST00000261405.10	8830	52	70	146010	65	396	5prime_fragment	FALSE	canonical	3	70	junction_1	11.160645142643	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAGCTGGGCATG	-2	True	NA	NA	False	NA	NA	NA	6124600	6094886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_6095585_6110373_6110583_6110865_6110969_6121173_6121339_6123141_6123197_6124420
transcript_29186.known	chr12	+	1432	9	FSM	ENSG00000010278.15	ENST00000538834.6	1432	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	472.620024438237	5894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGACTGGTTTTTGTTT	38	False	NA	13	True	AATAAA	-15	NA	6199874	6238259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200073_6200383_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_29187.known	chr12	+	1566	9	FSM	ENSG00000010278.15	ENST00000382518.6	1566	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	471.328640653207	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGTTTAATTATT	NA	False	NA	25	True	AATAAA	-27	NA	6199714	6238271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200073_6200421_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_29189.known	chr12	+	1182	9	FSM	ENSG00000010278.15	ENST00000382519.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	602.513433460201	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATATTGTACATAAAAGA	4	True	NA	103	True	AATGAA	-28	NA	6200384	6238139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6232936_6233006_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_29191.known	chr12	+	1360	9	FSM	ENSG00000010278.15	ENST00000610354.5	1360	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	620.810760216026	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	381	False	NA	1	True	AATAAA	-3	NA	6200326	6238247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200566_6200892_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_29192.known	chr12	+	1272	8	FSM	ENSG00000010278.15	ENST00000642746.1	1272	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	498.691839737135	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	4	True	NA	1	True	AATAAA	-3	NA	6199840	6238247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200073_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_29193.known	chr12	+	1225	8	FSM	ENSG00000010278.15	ENST00000009180.10	1225	8	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_1	109.438082391602	5399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTTGTTTTGTTTAA	19	True	NA	20	True	AATAAA	-22	NA	6200399	6238266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_2920.known	chr1	+	1577	11	FSM	ENSG00000180198.17	ENST00000373831.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	163.99649386496	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTCCTCTTTGGAAT	15	True	NA	22	True	NA	NA	NA	28518256	28538164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28518309_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_29201.known	chr12	+	1195	8	FSM	ENSG00000010278.15	ENST00000382515.7	1195	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	506.286681714651	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATTTGATACATAATAAA	416	False	NA	-21	True	NA	NA	NA	6200796	6238225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_29202.known	chr12	+	2969	16	FSM	ENSG00000008323.16	ENST00000684764.1	2969	16	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_10	14.2875236949351	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGTGGTGGTGTGCC	-8	True	NA	13	True	AATATA	-40	NA	6310681	6328506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744_6318878_6318992_6319109_6326427_6326574_6327253_6327947_6328135
transcript_29203.known	chr12	+	1683	12	FSM	ENSG00000008323.16	ENST00000536531.5	1683	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	13.8528273809458	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTCTCCTCCATCCAGA	12	True	NA	NA	False	AATAAA	-16	NA	6310737	6318973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6310849_6312158_6312365_6313628_6313785_6315004_6315170_6315553_6315650_6315868_6315920_6316254_6316405_6317302_6317414_6317546_6317697_6317856_6317995_6318300_6318421_6318744
transcript_29204.known	chr12	-	1339	6	FSM	ENSG00000067182.8	ENST00000366159.8	1339	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	55.0795787928702	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGAGGCTTGGGGGTTA	4087	False	NA	NA	False	NA	NA	NA	6341848	6331239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6331994_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_29205.known	chr12	-	2171	10	FSM	ENSG00000067182.8	ENST00000162749.7	2171	10	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	12.9710027977889	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCTCTTGGAGACAGT	16	True	NA	-13	True	ACTAAA	-15	NA	6342076	6328770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6329623_6329777_6330067_6330266_6330296_6330597_6330712_6330852_6330927_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_29210.known	chr12	-	593	2	FSM	ENSG00000111319.13	ENST00000536411.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGGAGCAGGACTCTAG	7968	False	NA	NA	False	NA	NA	NA	6376028	6374768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6374838_6375504
transcript_29211.known	chr12	-	3481	12	FSM	ENSG00000111319.13	ENST00000360168.7	3481	12	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_9	26.8872761698672	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGAGAGCTGGATGGG	-1	True	NA	2	True	AATAAA	-20	NA	6375224	6346842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367
transcript_29212.known	chr12	-	377	1	FSM	ENSG00000213942.3	ENST00000498412.1	377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTGATAGTCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	6410013	6409636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6409600_6410000
transcript_29213.known	chr12	+	1781	7	FSM	ENSG00000139192.12	ENST00000266556.8	1781	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.74535599249993	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTTGTTATTACT	-44	True	NA	27	True	AATACA	-37	NA	6452041	6462316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6452313_6453066_6453298_6453446_6453717_6457405_6457745_6458644_6458948_6460854_6460939_6462033
transcript_29220.known	chr12	-	865	5	FSM	ENSG00000215039.8	ENST00000536388.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.8857705285386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATTAGGAGATATACCT	23	True	NA	NA	False	NA	NA	NA	6451534	6447772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6448151_6448639_6448738_6450473_6450709_6450892_6450981_6451468
transcript_29225.nnic	chr12	-	871	4	NIC	ENSG00000215039.8	novel	865	5	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	10.6562449087639	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-61	True	NA	NA	False	ATTAAA	-28	NA	6451618	6447615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6448151_6448639_6448738_6450892_6450981_6451468
transcript_29229.nic	chr12	+	670	3	ISM	ENSG00000139193.4	ENST00000541233.1	1045	5	5175	5	5175	0	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCTCTCCAGCTTCCT	66	False	NA	4	True	AATAAA	-17	NA	6450526	6451713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_6450631_6450894_6451015_6451267
transcript_29230.nnic	chr12	-	784	3	NNC	ENSG00000215039.8	novel	700	3	NA	NA	-142	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	13.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	297	False	NA	NA	False	ATTAAA	-28	NA	6451260	6447615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_6448151_6448639_6448738_6451109
transcript_29232.nnic	chr12	-	775	3	NIC	ENSG00000215039.8	novel	700	3	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	14	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	53	True	NA	NA	False	ATTAAA	-28	NA	6451504	6447615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6448151_6448639_6448738_6451362
transcript_29233.nnic	chr12	-	772	3	NIC	ENSG00000215039.8	novel	700	3	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	12.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-50	True	NA	NA	False	ATTAAA	-28	NA	6451607	6447615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6448151_6448639_6448738_6451468
transcript_29234.known	chr12	-	700	3	FSM	ENSG00000215039.8	ENST00000504270.2	700	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	13	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	42	True	NA	NA	False	ATTAAA	-28	NA	6451515	6447615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6448151_6448639_6448758_6451468
transcript_29235.known	chr12	-	1068	5	FSM	ENSG00000139190.17	ENST00000400911.7	1068	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	17.606816861659	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	285	False	NA	NA	False	ATTAAA	-1	NA	6470653	6462236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6462843_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_29236.known	chr12	-	3139	4	FSM	ENSG00000139190.17	ENST00000361716.8	3139	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	8.05536398239638	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-2	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6464942_6465841_6466001_6466224_6466352_6470529
transcript_29237.known	chr12	-	1132	6	FSM	ENSG00000215039.8	ENST00000669354.1	1132	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	10.2489023802552	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTATTGATTGAT	10	True	NA	NA	False	AATAAA	-33	NA	6451547	6439157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6439677_6443542_6443718_6446960_6447088_6448036_6448151_6448639_6448758_6451468
transcript_29238.known	chr12	+	4825	32	FSM	ENSG00000010292.13	ENST00000315579.10	4825	32	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_6	68.1889094158698	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTTTCCTAAGCTTG	-11	True	NA	31	True	AATAAA	-19	NA	6494101	6531955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920_6531077_6531326
transcript_29245.known	chr12	-	343	3	FSM	ENSG00000111639.8	ENST00000540949.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	1181.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCGATAGAAGAGAAAGC	527	False	NA	-102	True	AATAAA	-42	NA	6493295	6492280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493250
transcript_29246.known	chr12	-	814	3	FSM	ENSG00000111639.8	ENST00000543164.5	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	1095.5	2455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCACATACTTTTGTT	-18	True	NA	-28	True	AATAAA	-21	NA	6493840	6492146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493458
transcript_29248.known	chr12	-	472	3	FSM	ENSG00000111639.8	ENST00000543959.5	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1155.5	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGATAGCCACATACTT	104	False	NA	27	True	AATAAA	-16	NA	6493718	6492151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493673
transcript_29249.known	chr12	-	898	3	FSM	ENSG00000111639.8	ENST00000229238.5	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	2135	junction_2	129.5	8501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTACTACTCTCATAA	-5	True	NA	-6	True	AATATA	-20	NA	6493262	6491885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493057
transcript_2925.known	chr1	+	2424	10	FSM	ENSG00000180198.17	ENST00000373832.5	2424	10	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	57.2572708197692	2461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGGCCACTTGTTTTC	6138	False	NA	-97	True	AATAAA	-14	NA	28518135	28538983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28518309_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_29250.known	chr12	-	601	3	FSM	ENSG00000111639.8	ENST00000537701.5	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1197	3016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-19	True	NA	16	True	NA	NA	NA	6493841	6492102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493716
transcript_29285.known	chr12	+	1348	9	FSM	ENSG00000111640.15	ENST00000396861.5	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	8060.79010938134	4655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCAACCAGTTACTTG	15	False	NA	19	True	AATAAA	-7	NA	6534533	6538359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534662_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_29295.known	chr12	+	1292	8	FSM	ENSG00000111640.15	ENST00000396858.5	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_1	8372.99439281078	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGCCGCACCTTG	11	True	NA	-25	True	NA	NA	NA	6535301	6538315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6535470_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_29309.known	chr12	+	1256	8	FSM	ENSG00000111640.15	ENST00000396859.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	3	23617	junction_4	739.137086509033	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCATCAATAAAGTACCC	200	False	NA	-1	True	NA	NA	NA	6534753	6538339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_29310.known	chr12	+	1285	9	FSM	ENSG00000111640.15	ENST00000229239.10	1285	9	0	0	0	0	multi-exon	FALSE	canonical	3	20749	junction_1	1451.7009635252	212161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTCCTGTCTTATT	-2	True	NA	31	True	AATAAA	-19	NA	6534516	6538371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_29311.known	chr12	+	1266	9	FSM	ENSG00000111640.15	ENST00000396856.5	1266	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8119.71931088138	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCAATAAAGTACCCT	13	False	NA	0	True	NA	NA	NA	6534531	6538340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536818_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_29312.known	chr12	+	1333	8	FSM	ENSG00000111640.15	ENST00000474249.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	20749	junction_1	1549.42605568669	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAGGGAGCCGCACCTT	22	False	NA	-26	True	NA	NA	NA	6534540	6538314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_29313.known	chr12	+	1720	4	FSM	ENSG00000111640.15	ENST00000466525.1	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	24196	junction_3	376.689379846166	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACCATCAATAAAGTAC	238	False	NA	-3	True	NA	NA	NA	6534791	6538337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534862_6536493_6536594_6536683_6537997_6538100
transcript_29314.known	chr12	-	422	2	FSM	ENSG00000269968.1	ENST00000602946.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1941	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTCCACCACTGACACGT	-2	True	NA	NA	False	NA	NA	NA	6538370	6537793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6537986_6538140
transcript_29320.known	chr12	-	3038	16	FSM	ENSG00000111641.12	ENST00000541778.5	3038	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	104.945615545492	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	8725	False	NA	-4	True	AATACA	-17	NA	6568691	6556870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_29322.nic	chr12	-	2696	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	non_canonical	3	264	junction_12	37.7137758503294	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	9079	False	NA	-4	True	AATACA	-17	NA	6568337	6556870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_29332.known	chr12	-	1267	8	FSM	ENSG00000111642.16	ENST00000545942.6	1267	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	108.753981864705	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTTTCTCTTCTGTAT	6871	False	NA	NA	False	AAAAAG	-10	NA	6606709	6600534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6600670_6600925_6601054_6601288_6601531_6601647_6601767_6601959_6602176_6602375_6602498_6606273_6606452_6606582
transcript_29343.known	chr12	-	668	4	FSM	ENSG00000111641.12	ENST00000540228.1	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	141.916250733389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCCCAGCACCTGGCAGT	-5	True	NA	NA	False	NA	NA	NA	6568297	6566261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568138
transcript_29344.known	chr12	-	630	4	FSM	ENSG00000111641.12	ENST00000545915.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	24.8596057893121	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCAGCACCTGGCAGTGA	-33	True	NA	NA	False	NA	NA	NA	6568325	6566259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568206
transcript_29349.known	chr12	-	555	4	FSM	ENSG00000111642.16	ENST00000545584.2	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	99.2818658612382	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGAGGAGGAGGAGG	-7	True	NA	44	True	AAGAAA	-27	NA	6606682	6601999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6602155_6602375_6602498_6606273_6606452_6606582
transcript_29353.known	chr12	-	508	2	FSM	ENSG00000111641.12	ENST00000546053.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCAAGAGGAAGTAGTG	1	True	NA	NA	False	NA	NA	NA	6568291	6567499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6567923_6568206
transcript_29354.known	chr12	-	2650	16	FSM	ENSG00000111641.12	ENST00000322166.10	2650	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	98.0475168250352	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	1	True	NA	-4	True	AATACA	-17	NA	6568291	6556870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_29355.known	chr12	-	2701	16	FSM	ENSG00000111641.12	ENST00000399466.6	2701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	119.507991364595	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	6	True	NA	-4	True	AATACA	-17	NA	6568286	6556870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_29356.known	chr12	-	2791	17	FSM	ENSG00000111641.12	ENST00000620535.4	2791	17	0	0	0	0	multi-exon	FALSE	non_canonical	1	3	junction_11	124.083247635408	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTATTTTTGAGGG	9084	False	NA	-3	True	AATACA	-18	NA	6568332	6556869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6564149_6564249_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_29357.known	chr12	-	2751	17	FSM	ENSG00000111641.12	ENST00000545200.5	2751	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	149.741443829022	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	10	True	NA	-4	True	AATACA	-17	NA	6568282	6556870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6558015_6558138_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_29358.known	chr12	-	1053	5	FSM	ENSG00000111644.8	ENST00000536350.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCAGATCCACTCAGA	55	False	NA	NA	False	NA	NA	NA	6647393	6644054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
transcript_29360.known	chr12	-	1150	9	FSM	ENSG00000111653.20	ENST00000488381.5	1150	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	65.4932009830028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGGCACAGTGCTGTCA	12	False	6663141	NA	False	NA	NA	NA	6663129	6651095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6653229_6653397_6655637_6655914_6656726_6656799_6663064
transcript_29364.nic	chr12	-	1268	8	NIC	ENSG00000111653.20	novel	1393	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	53.8209427411953	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	-11	True	NA	-12	True	AATAAA	-15	NA	6663127	6650590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6651235_6651323_6651386_6652270_6652310_6652661_6652768_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_29365.nic	chr12	-	1271	8	NIC	ENSG00000111653.20	novel	1393	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	53.9629502529282	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	-11	True	NA	-12	True	AATAAA	-15	NA	6663127	6650590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6651235_6651323_6651386_6652270_6652310_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_29366.known	chr12	-	1348	8	FSM	ENSG00000111653.20	ENST00000446105.6	1348	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.2445398539391	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTGGGTAGGTAAATAA	-1	True	NA	-47	True	NA	NA	NA	6663142	6650625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_29367.known	chr12	-	741	8	FSM	ENSG00000111653.20	ENST00000412586.6	741	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.2445398539391	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	40	False	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_29377.known	chr12	-	776	7	FSM	ENSG00000111653.20	ENST00000469749.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	53.2760108616752	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGCAGCCACTAACGGTA	2	True	NA	NA	False	NA	NA	NA	6663114	6651011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6656726_6656799_6663064
transcript_29378.known	chr12	-	678	7	FSM	ENSG00000111653.20	ENST00000444704.5	678	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	59.0197706987526	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	40	False	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6653229_6653397_6663064
transcript_29379.known	chr12	-	1280	7	FSM	ENSG00000111653.20	ENST00000619641.4	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	53.4334996878259	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCGTCCTCTGGGTTG	-1	True	NA	40	True	AGTAAA	-15	NA	6663142	6650538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6656726_6656799_6663064
transcript_29383.known	chr12	-	602	7	FSM	ENSG00000111653.20	ENST00000423703.6	602	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	61.9542842209748	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	40	False	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652661_6652771_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_29389.known	chr12	-	942	6	FSM	ENSG00000111653.20	ENST00000472002.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	52.9716905525961	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCCGCAGCCACTAACGG	2	True	NA	NA	False	NA	NA	NA	6663114	6651013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6653051_6656726_6656799_6663064
transcript_29395.nnic	chr12	-	841	4	NIC	ENSG00000111653.20	novel	1393	8	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	80.1013247220183	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTGTGTTTATTGTAG	-11	True	NA	-12	True	AATAAA	-15	NA	6663127	6650590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6651235_6651323_6651386_6656726_6656799_6663064
transcript_29398.known	chr12	-	401	2	FSM	ENSG00000111653.20	ENST00000493267.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGAGGCCTAGGCGGGC	12	True	NA	NA	False	NA	NA	NA	6663104	6656437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6656799_6663064
transcript_294.known	SIRV5	+	1984	18	FSM	SIRV5A	SIRV502	1984	18	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_4	3693.94232068018	3673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_29402.known	chr12	-	3008	11	FSM	ENSG00000126746.18	ENST00000396801.7	3008	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	87.1417810238005	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAT	-26	True	NA	61	True	NA	NA	NA	6689510	6666647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_29422.known	chr12	-	2432	6	FSM	ENSG00000139200.14	ENST00000540656.5	2432	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	36.9724221548981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	415	False	NA	-7	True	AATAAA	-14	NA	6700430	6693791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
transcript_29423.known	chr12	-	2323	6	FSM	ENSG00000139200.14	ENST00000320591.9	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	25.9121593079388	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	11	True	NA	-7	True	AATAAA	-14	NA	6700800	6693791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_29425.known	chr12	-	2711	5	FSM	ENSG00000139200.14	ENST00000534837.6	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	10.0591997693654	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	-4	True	NA	-6	True	AATAAA	-15	NA	6700815	6693790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_29430.known	chr12	+	1831	8	FSM	ENSG00000111652.10	ENST00000543155.6	1831	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	58.7426070033585	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	13	True	NA	31	True	AATAAA	-24	NA	6724045	6731865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_29432.known	chr12	+	1721	8	FSM	ENSG00000111652.10	ENST00000229251.7	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	120.55754828703	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	38	False	NA	11	True	ATTAAA	-18	NA	6724070	6731807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724153_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_29434.known	chr12	+	1832	8	FSM	ENSG00000111652.10	ENST00000539735.5	1832	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	124.354168340565	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGCAGAAATAAATCTATG	2	True	NA	-6	True	ATTAAA	-39	NA	6724078	6731828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724251_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_29436.known	chr12	+	1707	8	FSM	ENSG00000111652.10	ENST00000534877.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	136.107850393633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGAGAAATCTATCTAC	9	True	NA	8	True	AATAAA	-1	NA	6724297	6731842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724331_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_29438.known	chr12	+	898	7	FSM	ENSG00000111652.10	ENST00000538375.5	898	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	141.209950074349	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCAGAGAGCCTTCT	9	True	NA	NA	False	NA	NA	NA	6724134	6731097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724180_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_29441.known	chr12	+	1768	7	FSM	ENSG00000111652.10	ENST00000626119.2	1768	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	171.535629599865	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTATCTTCTGTGTT	-19	True	NA	39	True	AATAAA	-32	NA	6724013	6731873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724153_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_29444.known	chr12	+	1728	7	FSM	ENSG00000111652.10	ENST00000543939.5	1728	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	185.419119833959	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGACGCAGAAATAAATC	-7	True	NA	-10	True	ATTAAA	-35	NA	6724118	6731824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724267_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_29455.known	chr12	+	2034	7	FSM	ENSG00000111652.10	ENST00000534947.5	2034	7	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	21.7842960766593	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATCTTCTGTGTTTG	-2	True	NA	41	True	AATAAA	-34	NA	6724286	6731875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_29460.known	chr12	+	820	5	FSM	ENSG00000159335.18	ENST00000540667.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	849.853038766115	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGCCCCACAGCTGCCC	15	False	NA	-27	True	NA	NA	NA	6765515	6770875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6765639_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_29461.known	chr12	+	773	5	FSM	ENSG00000159335.18	ENST00000389462.8	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	840.894464246257	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGCCAAGTCCAGCCAC	13	False	NA	NA	False	NA	NA	NA	6766374	6770498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6766751_6769602_6769675_6769843_6770000_6770156_6770219_6770391
transcript_29462.known	chr12	+	1162	5	FSM	ENSG00000159335.18	ENST00000309083.8	1162	5	0	0	0	0	multi-exon	FALSE	canonical	3	1733	junction_2	184.005944197463	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	1	True	NA	30	True	AATAAA	-26	NA	6766362	6770952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6766751_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_2948.known	chr1	+	204	1	FSM	ENSG00000200087.1	ENST00000363217.1	204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTATACTAGATTTTAAG	-2	True	NA	9	True	NA	NA	NA	28508558	28508762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28508600_28508800
transcript_29482.known	chr12	-	1555	9	FSM	ENSG00000089693.11	ENST00000203630.10	1555	9	0	0	0	0	multi-exon	FALSE	canonical	3	2988	junction_5	292.728970209646	6854	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGGATTCTGGCTGT	-1	True	NA	-19	True	AATAAA	-18	NA	6753141	6747995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
transcript_29485.known	chr12	+	1976	8	FSM	ENSG00000089692.9	ENST00000203629.3	1976	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.46230122694433	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCTGGCTCTTTCT	-7	True	NA	7	True	AATAAA	-18	NA	6772519	6778455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6772911_6773191_6773340_6773696_6774002_6774594_6774865_6775272_6775549_6777263_6777507_6777790_6777922_6778243
transcript_29487.nnic	chr12	+	999	5	NIC	ENSG00000089692.9	novel	1976	8	NA	NA	1372	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	8.40758586040012	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCTGGCTCTTTCT	1241	False	NA	7	True	AATAAA	-18	NA	6773891	6778455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_6774002_6774594_6774865_6775272_6775549_6777790_6777922_6778243
transcript_2949.known	chr1	+	206	1	FSM	ENSG00000274266.1	ENST00000364938.1	206	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAGCACTGAATCTGG	-8	True	NA	NA	False	NA	NA	NA	28507365	28507571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28507400_28507600
transcript_29491.nnic	chr12	+	1678	3	NNC	ENSG00000010610.10	novel	3049	10	NA	NA	4488	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	1	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	-7	True	NA	5	True	AATAAA	-17	NA	6818541	6820799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_6818651_6818846_6818915_6819298
transcript_29495.known	chr12	+	1610	5	FSM	ENSG00000250510.8	ENST00000428545.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.0623058987491	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	48	False	NA	11	True	ATTAAA	-23	NA	6821703	6827421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6821901_6823467_6823764_6825483_6825674_6826195_6826354_6826652
transcript_29498.known	chr12	+	2495	5	FSM	ENSG00000250510.8	ENST00000311268.8	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.06828373317832	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	-10	True	NA	11	True	ATTAAA	-23	NA	6821820	6827421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6821901_6823467_6824766_6825483_6825674_6826195_6826354_6826652
transcript_29499.known	chr12	+	1150	4	FSM	ENSG00000250510.8	ENST00000382315.7	1150	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.0800688297608	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	37	False	NA	11	True	ATTAAA	-23	NA	6821867	6827421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6821901_6825483_6825674_6826195_6826354_6826652
transcript_2950.known	chr1	+	2201	3	FSM	ENSG00000242125.3	ENST00000413987.1	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_1	97	4337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	NA	False	NA	24	True	AGTAAA	-17	NA	28505979	28510892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28506085_28508127_28508161_28508829
transcript_29501.known	chr12	+	2129	14	FSM	ENSG00000110811.20	ENST00000612048.4	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	17.1457379940598	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGGGCCAGTCAAGTG	1194	False	NA	18	True	AATAAA	-18	NA	6829827	6839846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_29505.known	chr12	-	1047	6	FSM	ENSG00000111665.12	ENST00000229265.10	1047	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	116.083762861134	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	19	True	NA	-2	True	AAAAAG	-16	NA	6851252	6848815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849784_6850466_6850597_6850832_6851010_6851221
transcript_29506.known	chr12	-	1144	6	FSM	ENSG00000111665.12	ENST00000538862.7	1144	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	15.8189759466282	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAACCTTGCACCGAG	-15	True	NA	-14	True	ATTAAA	-34	NA	6851286	6848827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_2951.known	chr1	+	2844	13	FSM	ENSG00000180198.17	ENST00000373833.10	2844	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	215.266824094089	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTGAGACAGA	10	False	NA	NA	False	AATAGA	-37	NA	28506056	28539300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28506085_28508127_28508161_28508829_28508902_28516724_28516868_28529857_28529940_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_29514.known	chr12	-	985	5	FSM	ENSG00000111665.12	ENST00000540683.1	985	5	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	122.289615258206	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAAGGTATATGT	22	True	NA	-29	True	ATTAAA	-19	NA	6851249	6848842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_29517.known	chr12	-	619	4	FSM	ENSG00000111665.12	ENST00000545368.5	619	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	149.139755486814	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCACTTTCCCTTG	-21	True	NA	NA	False	NA	NA	NA	6851292	6849074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6851221
transcript_29522.known	chr12	-	646	3	FSM	ENSG00000111665.12	ENST00000446553.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	12	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACACACACATAAC	-21	True	NA	NA	False	NA	NA	NA	6851292	6850198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6850597_6850832_6851010_6851221
transcript_29523.known	chr12	+	997	2	FSM	ENSG00000111664.11	ENST00000542751.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCTAAGACACCTGCA	4446	False	NA	-18	True	NA	NA	NA	6845366	6847352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6845803_6846791
transcript_29524.known	chr12	-	1327	5	FSM	ENSG00000111665.12	ENST00000535406.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	16.2230545829076	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	13	True	NA	-15	True	ATTAAA	-33	NA	6851258	6848828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832
transcript_29525.known	chr12	-	1490	4	FSM	ENSG00000111665.12	ENST00000536241.1	1490	4	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_3	17.0489491367259	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	9	True	NA	-15	True	ATTAAA	-33	NA	6851262	6848828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849322_6849859_6850466_6851010_6851221
transcript_29526.known	chr12	+	3083	20	FSM	ENSG00000111667.14	ENST00000389231.9	3083	20	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_1	55.5018404526265	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	0	True	NA	4	True	AATAAA	-4	NA	6852147	6866620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_29527.known	chr12	+	3162	20	FSM	ENSG00000111667.14	ENST00000229268.13	3162	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	170.796066696198	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	2	True	NA	16	True	AATAAA	-16	NA	6852149	6866632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863378_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_29542.known	chr12	+	2294	12	FSM	ENSG00000111674.9	ENST00000229277.6	2294	12	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_1	51.9702712222006	1576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTCTAAGGAGTCT	-7	True	NA	26	True	ATTAAA	-16	NA	6914579	6923697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
transcript_29551.known	chr12	+	1615	8	FSM	ENSG00000010626.15	ENST00000007969.12	1615	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	3.60272006083385	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	4498	False	NA	5	True	AATAAA	-15	NA	6904732	6914229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_29559.known	chr12	+	791	7	FSM	ENSG00000111669.15	ENST00000488464.6	791	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4057.87951261356	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCCATCTTCCCTAC	-25	True	NA	NA	False	NA	NA	NA	6868099	6870383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6868256_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_2956.known	chr1	+	483	6	FSM	ENSG00000180098.9	ENST00000495215.5	483	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	88.1852595392223	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCGAGCCCTGACGGAGT	152	False	NA	NA	False	NA	NA	NA	28553246	28567332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28553308_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293
transcript_29560.known	chr12	+	1587	7	FSM	ENSG00000111669.15	ENST00000535434.5	1587	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	3990.89998204248	3178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAACATCTCTTACTAT	-11	True	NA	17	True	TATAAA	-45	NA	6868113	6870939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6868510_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_29566.known	chr12	+	1208	7	FSM	ENSG00000010626.15	ENST00000323702.9	1208	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	3.19722101554181	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	-1	True	NA	4	True	AATAAA	-14	NA	6904840	6914228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6913890
transcript_29567.known	chr12	+	1412	7	FSM	ENSG00000010626.15	ENST00000451681.5	1412	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	3.8151743807532	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTCGGATTTCCAATAA	4556	False	NA	-30	True	NA	NA	NA	6904790	6914194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_29570.known	chr12	+	1387	6	FSM	ENSG00000010626.15	ENST00000433346.5	1387	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.23832034148352	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTCTCAGACTGGGTT	2	True	NA	92	True	NA	NA	NA	6873568	6907733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6873782_6883703_6883920_6905584_6905760_6905844_6905955_6906408_6906663_6907314
transcript_29580.known	chr12	+	1061	5	FSM	ENSG00000010626.15	ENST00000622489.4	1061	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.76313972081441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGGTTTGTGAGACATTG	4498	False	NA	17	True	AATAAA	-27	NA	6904732	6914241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6913890
transcript_29583.known	chr12	+	969	5	FSM	ENSG00000010626.15	ENST00000428946.5	969	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	5.02493781056044	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	-8	True	NA	5	True	AATAAA	-15	NA	6904833	6914229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6913890
transcript_29588.known	chr12	+	845	4	FSM	ENSG00000240370.6	ENST00000421824.1	845	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.40870359029762	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCACTACCCGCCGGCT	-1	True	NA	NA	False	NA	NA	NA	6873655	6884741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6873782_6882195_6882328_6883703_6883920_6884370
transcript_2959.known	chr1	-	524	6	FSM	ENSG00000197989.15	ENST00000475441.6	524	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	27.0333127825651	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTTTGTATTTTT	246	False	NA	NA	False	AATAAA	-27	NA	28581623	28578538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581093_28581230_28581589
transcript_29605.known	chr12	+	1438	3	FSM	ENSG00000240370.6	ENST00000412023.5	1438	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTAGGCTCGAGCCGCTG	713	False	NA	NA	False	NA	NA	NA	6873388	6884616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6873782_6882195_6882328_6883703
transcript_29606.known	chr12	+	587	3	FSM	ENSG00000240370.6	ENST00000451612.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAAATGCCCATCGGC	3	True	NA	NA	False	NA	NA	NA	6873478	6884438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6873782_6883703_6883920_6884370
transcript_29609.known	chr12	-	1203	3	FSM	ENSG00000111671.10	ENST00000524270.6	1203	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	42	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-7	True	NA	-4	True	AGTAAA	-27	NA	6873303	6870934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6871320_6872237_6872998_6873245
transcript_29614.known	chr12	+	1105	1	FSM	ENSG00000248593.3	ENST00000602547.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGTCTTGTCATCT	NA	False	NA	20	True	AATAAA	-31	NA	6884681	6885786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6884700_6885800
transcript_29615.known	chr12	+	427	2	FSM	ENSG00000111669.15	ENST00000474253.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	10131	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCACTTACTATAATGGT	1147	False	NA	-22	True	NA	NA	NA	6870016	6870571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6870137_6870264
transcript_29616.known	chr12	-	1205	3	FSM	ENSG00000111671.10	ENST00000523102.5	1205	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	11	True	NA	-4	True	AGTAAA	-27	NA	6873285	6870934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6871320_6872237_6872987_6873214
transcript_29617.known	chr12	+	474	2	FSM	ENSG00000010626.15	ENST00000472633.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	7381	False	NA	4	True	AATAAA	-14	NA	6913101	6914228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6913238_6913890
transcript_29619.known	chr12	+	4351	10	FSM	ENSG00000111676.15	ENST00000356654.8	4351	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.7826600777533	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	-1	True	NA	37	True	AAAACA	-21	NA	6924462	6942321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6924538_6933839_6934029_6934175_6934314_6934464_6934579_6935546_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_2962.known	chr1	-	682	6	FSM	ENSG00000197989.15	ENST00000483436.5	682	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	33.807691432572	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATATTTGTGTTTG	51	False	NA	NA	False	AATAAA	-20	NA	28581818	28578545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581093_28581230_28581589
transcript_29622.nic	chr12	+	1995	5	ISM	ENSG00000111676.15	ENST00000396684.3	4702	10	9711	0	-28	0	3prime_fragment	FALSE	canonical	3	97	junction_1	16.3477827242718	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	839	False	NA	37	True	AAAACA	-21	NA	6937669	6942321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_29624.known	chr12	+	551	3	FSM	ENSG00000111678.11	ENST00000540506.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	497	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGCCTTGGTGTCAGT	9	False	NA	17	True	AATAAA	-10	NA	6944121	6945996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6944174_6944379_6944653_6945770
transcript_29635.known	chr12	-	1097	1	FSM	ENSG00000272173.1	ENST00000607421.1	1097	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCGCAGTTTCCTAAAG	9043	False	NA	-3	True	AGTAAA	-18	NA	6944604	6943507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6943500_6944600
transcript_29636.known	chr12	+	561	3	FSM	ENSG00000111678.11	ENST00000229281.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_2	126	20160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	0	True	NA	23	True	AATAAA	-16	NA	6944021	6946002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6944174_6944475_6944653_6945770
transcript_29637.known	chr12	+	662	3	FSM	ENSG00000111678.11	ENST00000537087.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	544.5	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	17	False	NA	23	True	AATAAA	-16	NA	6943833	6946002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6944174_6944475_6944566_6945770
transcript_29638.known	chr12	+	640	3	FSM	ENSG00000111678.11	ENST00000542222.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	506	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTCAGTCTCTTGC	502	False	NA	24	True	AATAAA	-17	NA	6943432	6946003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6943663_6944475_6944653_6945770
transcript_29641.known	chr12	+	2159	16	FSM	ENSG00000111679.17	ENST00000399448.5	2159	16	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_6	36.2580872204932	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	5	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6946740_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_29643.known	chr12	+	2161	16	FSM	ENSG00000111679.17	ENST00000318974.14	2161	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	41.9372017293583	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	-40	True	NA	10	True	AATAAA	-18	NA	6951355	6961316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6951521_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_29650.known	chr12	+	350	2	FSM	ENSG00000257084.1	ENST00000537269.1	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACCTGTCTTTTGTCTA	28	False	NA	28	True	AATAAA	-42	NA	6963245	6964447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6963349_6964200
transcript_29655.known	chr12	-	1379	10	FSM	ENSG00000215021.10	ENST00000535923.6	1379	10	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	527.980662758508	4175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	0	True	NA	4	True	NA	NA	NA	6970664	6965326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_29656.known	chr12	-	1354	9	FSM	ENSG00000215021.10	ENST00000440277.6	1354	9	0	0	0	0	multi-exon	FALSE	canonical	1	85	junction_4	645.079052810584	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	8783	False	NA	4	True	NA	NA	NA	6970753	6965326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967239_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_29657.known	chr12	-	1518	9	FSM	ENSG00000215021.10	ENST00000543465.5	1518	9	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	552.997513556797	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8820	False	NA	-21	True	AATAAA	-21	NA	6970716	6965351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_29658.known	chr12	-	858	4	FSM	ENSG00000215021.10	ENST00000546111.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	698.399280895646	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	8785	False	NA	-21	True	AATAAA	-21	NA	6970751	6965351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6966423_6966501_6970195_6970281_6970416
transcript_29659.known	chr12	-	1735	9	FSM	ENSG00000215021.10	ENST00000677354.1	1735	9	0	0	0	0	multi-exon	FALSE	canonical	1	191	junction_2	554.93489201437	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	4	True	NA	-21	True	AATAAA	-21	NA	6970618	6965351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_29660.known	chr12	-	639	2	FSM	ENSG00000215021.10	ENST00000542294.1	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	1537	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCGGCCTTTTCTTTTT	8834	False	NA	NA	False	NA	NA	NA	6970702	6969927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6970281_6970416
transcript_29662.known	chr12	-	2235	13	FSM	ENSG00000111684.11	ENST00000261407.9	2235	13	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_8	44.4762733250987	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGCATTCCTGACTGC	22	True	NA	-8	True	GATAAA	-27	NA	7018476	6976184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6976892_6977133_6977263_6977366_6977526_6977597_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_29664.known	chr12	+	2682	12	FSM	ENSG00000182326.16	ENST00000360817.10	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.85923019793528	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	3	True	NA	7	True	AATAAA	-18	NA	7060717	7071032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7060878_7061838_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_29665.known	chr12	+	2972	12	FSM	ENSG00000182326.16	ENST00000328916.7	2972	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	5.31487853899762	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	NA	False	NA	7	True	AATAAA	-18	NA	7060514	7071032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7060878_7061751_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_29686.known	chr12	+	4873	6	FSM	ENSG00000126749.16	ENST00000599672.6	4873	6	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_4	50.8385680364819	2815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTTCATTTCTTGG	-3	True	NA	14	True	AATAAA	-16	NA	6970912	6979936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6975695
transcript_29687.known	chr12	+	616	5	FSM	ENSG00000126749.16	ENST00000539196.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	235.086154420034	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGTTTTGGGGTTCC	121	False	NA	NA	False	NA	NA	NA	6971060	6975977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975695
transcript_29688.known	chr12	-	2902	11	FSM	ENSG00000111684.11	ENST00000535479.5	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_6	42.5536132425908	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTAGCATTCCTGACTG	21	True	NA	-9	True	GATAAA	-26	NA	7018477	6976185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6976892_6977133_6977263_6977366_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_29689.known	chr12	+	958	8	FSM	ENSG00000126749.16	ENST00000261406.7	958	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	289.222956155536	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAGAATGCAGC	2	False	NA	NA	False	NA	NA	NA	6970941	6988260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6983001_6983207_6987781_6987839_6988167
transcript_29690.known	chr12	-	2488	11	FSM	ENSG00000159403.18	ENST00000647956.2	2488	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_9	7.33757453113766	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTGCAAAATGAGTCAAAA	4	True	NA	-12	True	AATAAA	-19	NA	7092445	7080218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7091451_7091681_7092386
transcript_29692.known	chr12	-	1881	10	FSM	ENSG00000159403.18	ENST00000648162.1	1881	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	7.35014907046277	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGCTGGACACCCA	8432	False	NA	NA	False	AAAACA	-1	NA	7090792	7080740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7090589
transcript_29695.nic	chr12	-	939	6	NIC	ENSG00000139178.12	novel	561	5	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	7.97496081495075	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTGTTTGTTT	NA	False	NA	-13	True	AATGAA	-14	NA	7109311	7098295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_7098413_7099685_7099761_7099900_7100027_7101897_7102088_7108250_7108480_7109109
transcript_29698.nnic	chr12	-	821	5	NNC	ENSG00000139194.8	novel	957	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.5086181285469	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	-3	True	NA	-15	True	TTTAAA	-16	NA	7128891	7123685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_7123900_7124037_7124175_7124628_7124731_7128239_7128419_7128702
transcript_2970.known	chr1	-	1104	5	FSM	ENSG00000197989.15	ENST00000470977.6	1104	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	30.1413337462031	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-9	True	NA	NA	False	AATAAA	-28	NA	28581878	28578537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581093_28581230_28581589
transcript_29703.known	chr12	-	957	4	FSM	ENSG00000139194.8	ENST00000266560.8	957	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1.69967317119759	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	-1	True	NA	-15	True	TTTAAA	-16	NA	7128889	7123685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7124175_7124628_7124731_7128239_7128419_7128702
transcript_29704.nnic	chr12	-	1261	4	Fusion	ENSG00000139194.8_ENSG00000256967.1	novel	957	4	NA	NA	49	0	multi-exon	FALSE	canonical	1	1	junction_3	15.6418242755334	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	4561	False	NA	-15	True	TTTAAA	-16	NA	7130203	7123685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_7124175_7124628_7124731_7128239_7128419_7129712
transcript_29707.known	chr12	-	813	3	FSM	ENSG00000139178.12	ENST00000545337.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	7.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTCAGATTTGTTTT	17	True	NA	-2	True	AGTAAA	-17	NA	7109210	7101604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7102088_7108250_7108480_7109109
transcript_29708.known	chr12	-	564	3	FSM	ENSG00000139194.8	ENST00000542370.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	15.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAGAGCATGTACATTG	5891	False	NA	NA	False	AATAAA	-23	NA	7128873	7127498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7127713_7128239_7128419_7128702
transcript_29709.nnic	chr12	-	719	3	NNC	ENSG00000139194.8	novel	564	3	NA	NA	-133	16	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	16.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGATACAAATAAAAAACAAT	5742	False	NA	NA	False	AATAAA	-23	NA	7129022	7127533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_7127754_7128239_7128419_7128702
transcript_29711.known	chr12	-	354	2	FSM	ENSG00000139178.12	ENST00000539927.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATGTAGGGGCAGTCG	99	False	NA	NA	False	NA	NA	NA	7109128	7108144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7108480_7109109
transcript_29713.known	chr12	-	3335	6	FSM	ENSG00000139178.12	ENST00000266542.9	3335	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.62138772902208	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGTGTATGTCTAGA	13	True	NA	-5	True	AATATA	-13	NA	7109214	7094553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7097164_7099685_7099761_7099900_7100027_7101897_7102088_7108250_7108480_7109109
transcript_29714.known	chr12	-	515	3	FSM	ENSG00000139194.8	ENST00000543045.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAACAATACAAAATGAT	5902	False	NA	NA	False	AATAAA	-7	NA	7128862	7127549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7127713_7128239_7128432_7128702
transcript_29716.known	chr12	+	4013	18	FSM	ENSG00000139182.15	ENST00000266546.11	4013	18	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_6	11.122159059523	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	-28	True	NA	NA	False	AATAAA	-22	NA	7130370	7158945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940
transcript_29720.known	chr12	-	735	3	FSM	ENSG00000256967.1	ENST00000538062.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTCAGGCTGTCTGTT	3566	False	NA	NA	False	AATAAA	-23	NA	7131198	7129507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7130018_7130322_7130374_7131024
transcript_29721.known	chr12	+	3237	16	FSM	ENSG00000139197.11	ENST00000675855.1	3237	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	22.4881203206394	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	-13	True	NA	24	True	AATAAA	-25	NA	7189685	7211459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_29723.known	chr12	+	2253	16	FSM	ENSG00000139197.11	ENST00000434354.6	2253	16	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_2	28.3365488371467	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAATTCAAGGGCTGT	-12	True	NA	NA	False	NA	NA	NA	7189686	7210431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7189751_7190361_7190570_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_29724.known	chr12	+	2477	16	FSM	ENSG00000139197.11	ENST00000420616.6	2477	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	23.6242812941826	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCCGCTTTGGATGTGAT	16	True	NA	NA	False	NA	NA	NA	7189714	7210262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7190217_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_29725.known	chr12	+	3252	15	FSM	ENSG00000139197.11	ENST00000266563.9	3252	15	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	19.2072477816823	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTGGTCATGAAGCT	-17	True	NA	48	True	AATAAA	-21	NA	7189583	7211483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_29732.known	chr12	+	3170	15	FSM	ENSG00000139197.11	ENST00000266564.7	3170	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	27.2415498974696	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTCTGCTGGTCATGAA	422	False	NA	45	True	AATAAA	-18	NA	7190360	7211480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203455_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_29738.nnic	chr12	+	2361	14	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4494	5	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_6	15.2156101717745	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTTCAAGACAATTTC	NA	False	NA	7	True	AATAAA	-15	NA	7299577	7328724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025_7318183_7320724_7320805_7322417_7322542_7323233_7323315_7323458_7323561_7324272_7324401_7324498_7324599_7326975_7327096_7328286
transcript_29749.nnic	chr12	+	1523	6	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4494	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_3	14.9184449591772	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGATAATAGCTGAT	NA	False	NA	-24	True	NA	NA	NA	7299577	7318517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025
transcript_29753.nnic	chr12	+	1027	5	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4494	-5258	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	33.2819395468473	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTTCAAATTGAAAT	NA	False	NA	NA	False	GATAAA	-15	NA	7299577	7313259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_7299796_7304282_7304533_7306532_7306744_7310538_7310747_7313119
transcript_29754.nnic	chr12	+	1312	5	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4494	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	29.8202951024969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGATAATAGCTGAT	NA	False	NA	-24	True	NA	NA	NA	7299577	7318517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_7299796_7304282_7304533_7310538_7310747_7317136_7317281_7318025
transcript_29756.nnic	chr12	+	816	4	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4494	-5258	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	41.6839963961657	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTTCAAATTGAAAT	NA	False	NA	NA	False	GATAAA	-15	NA	7299577	7313259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_7299796_7304282_7304533_7310538_7310747_7313119
transcript_29759.nnic	chr12	+	573	2	NNC	ENSG00000215009.6	novel	2349	13	NA	NA	-4494	-13880	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGGTTTCCTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	7299577	7304637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_7299796_7304282
transcript_29760.known	chr12	+	2142	13	FSM	ENSG00000215009.6	ENST00000399422.5	2349	13	212	-5	212	5	multi-exon	FALSE	canonical	3	40	junction_5	10.3668810267227	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGTTCAAGACAATTTC	NA	False	NA	7	True	AATAAA	-15	NA	7304283	7328724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7304533_7306532_7306744_7310538_7310747_7317136_7317281_7318025_7318183_7320724_7320805_7322417_7322542_7323233_7323315_7323458_7323561_7324272_7324401_7324498_7324599_7326975_7327096_7328286
transcript_29761.known	chr12	+	710	3	FSM	ENSG00000215009.6	ENST00000533292.1	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGATAATAGCTGAT	NA	False	NA	-24	True	NA	NA	NA	7310672	7318517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7310747_7317136_7317281_7318025
transcript_29762.known	chr12	-	4583	20	FSM	ENSG00000177675.9	ENST00000313599.8	4583	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.306892204991858	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTGAATGTTTGTGTTT	-4	True	NA	NA	False	AATAAA	-28	NA	7444153	7354959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7355131_7357379_7357487_7367235_7367332_7368086_7368198_7368932_7368966_7369356_7369666_7373319_7373641_7374441_7374757_7374830_7374924_7375280_7375596_7375699_7376015_7378977_7379299_7396094_7396416_7398263_7398585_7403534_7403856_7406531_7406853_7432415_7432737_7433373_7433695_7441153_7441247_7444096
transcript_29763.known	chr12	-	4071	17	FSM	ENSG00000177575.13	ENST00000432237.3	4071	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.79508497187474	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTTTCGTTTCTCA	-5	True	NA	NA	False	AATAAA	-33	NA	7503777	7470810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7471398_7479859_7479914_7481160_7481257_7482642_7482763_7482965_7483005_7483366_7483676_7485095_7485417_7486498_7486814_7486893_7486987_7487358_7487674_7487772_7488088_7495080_7495402_7496812_7497134_7498867_7499189_7501138_7501463_7502477_7502565_7503644
transcript_29764.known	chr12	-	1236	2	FSM	ENSG00000184344.4	ENST00000329913.4	1236	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTGTTTATAATTT	0	True	NA	15	True	AATAAA	-42	NA	7695775	7689783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7690705_7695460
transcript_29765.known	chr12	+	1100	4	FSM	ENSG00000187569.3	ENST00000345088.3	1100	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1.24721912892465	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	-1	True	NA	NA	False	AATAAA	-27	NA	7711432	7717559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7711653_7715182_7715428_7716197_7716240_7716966
transcript_29768.known	chr12	+	836	6	FSM	ENSG00000111704.11	ENST00000541267.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	213.917367223889	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAGTCCTGGAGC	NA	False	NA	NA	False	NA	NA	NA	7787793	7794808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7787844_7788418_7788579_7789619_7789766_7792949_7793213_7794456_7794544_7794678
transcript_2977.known	chr1	-	1644	4	FSM	ENSG00000197989.15	ENST00000461448.6	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	23.8932812499432	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	12	False	NA	NA	False	AATAAA	-28	NA	28581857	28578537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28580647_28581110_28581230_28581589
transcript_29778.known	chr12	+	5182	4	FSM	ENSG00000111704.11	ENST00000229307.9	5182	4	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_3	62.8295754844449	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	-4	True	NA	28	True	AATAAA	-19	NA	7789401	7799146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678
transcript_2978.known	chr1	-	1082	5	FSM	ENSG00000197989.15	ENST00000461832.2	1082	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	20.7906228862918	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-4	True	NA	NA	False	AATAAA	-28	NA	28581873	28578537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581110_28581230_28581589
transcript_29790.known	chr12	-	3827	10	FSM	ENSG00000059804.16	ENST00000075120.12	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	3105	junction_3	215.098943641189	4703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGCTTATTTACTT	-2	True	NA	-24	True	AATAAA	-19	NA	7936187	7919229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_29791.known	chr12	-	4414	9	FSM	ENSG00000059804.16	ENST00000486749.5	4414	9	0	0	0	0	multi-exon	FALSE	canonical	3	3105	junction_3	207.254938119698	3170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGGGCTTATTTACT	156	False	NA	-25	True	AATAAA	-18	NA	7936167	7919230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_29792.known	chr12	-	1784	5	FSM	ENSG00000059804.16	ENST00000495813.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	3428	junction_2	120.819079619073	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTGAGACTGTGTCT	154	False	NA	NA	False	NA	NA	NA	7936169	7929503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_29793.known	chr12	-	763	3	FSM	ENSG00000059804.16	ENST00000476634.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	3609	junction_1	73	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTATTATTTTACCCA	-2	True	NA	NA	False	TATAAA	-1	NA	7936187	7932645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7933148_7933809_7933903_7936019
transcript_29800.known	chr12	-	1783	1	FSM	ENSG00000279865.1	ENST00000624929.1	1783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1981	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTCCTTATTTCTG	-14	True	NA	NA	False	AATAAA	-21	NA	8082163	8080380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8080400_8082200
transcript_29801.known	chr12	+	2517	8	FSM	ENSG00000089818.18	ENST00000638237.1	2517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	75.0607916890009	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCTTTTATCTTTTAA	-11	True	NA	22	True	ATTAAA	-13	NA	8082265	8097768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093044_8095600_8095704_8096041
transcript_29802.known	chr12	+	2578	7	FSM	ENSG00000089818.18	ENST00000639071.1	2578	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	17.5949803447839	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATAATGGTAATTAAAAA	-3	True	NA	-8	True	TATAAA	-18	NA	8082273	8097738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8093056_8095600_8095704_8096041
transcript_29803.known	chr12	+	2446	7	FSM	ENSG00000089818.18	ENST00000450991.6	2446	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	75.5792446523662	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTTTATCTTTTAAT	-9	True	NA	23	True	ATTAAA	-14	NA	8082267	8097769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_29804.known	chr12	+	3940	7	FSM	ENSG00000089818.18	ENST00000638883.1	3940	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	18.915748876414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGCAATAATGGTAATTAA	14	True	NA	-11	True	TATAAA	-15	NA	8082290	8097735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_29805.known	chr12	+	1036	2	FSM	ENSG00000089818.18	ENST00000546181.2	1036	2	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAACACTTTTTGCCCG	NA	False	NA	NA	False	NA	NA	NA	8082227	8090815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935
transcript_2981.known	chr1	+	1799	9	FSM	ENSG00000180098.9	ENST00000373830.4	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	12.2346843032422	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTCTTCTT	-10	True	NA	14	True	AATATA	-7	NA	28553084	28578545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_29813.nnic	chr12	-	2039	5	NNC	ENSG00000164845.16	novel	829	7	NA	NA	-55	1324	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	8.72854512504805	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCTTAATCTACAGATG	NA	False	NA	-41	True	AATAAA	-21	NA	8243003	8231187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_8232608_8234275_8234426_8235600_8235735_8238666_8238750_8242751
transcript_29815.nnic	chr12	-	1011	5	NNC	ENSG00000164845.16	novel	829	7	NA	NA	-55	296	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	8.72854512504805	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACGTTCCCCCAACGTG	NA	False	NA	NA	False	AATAAA	-16	NA	8243003	8232215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_8232608_8234275_8234426_8235600_8235735_8238666_8238750_8242751
transcript_2982.known	chr1	+	1132	10	FSM	ENSG00000180098.9	ENST00000480930.5	1132	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	88.7703376106353	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGGAGATCATGAA	4	True	NA	19	True	NA	NA	NA	28553098	28577744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_2983.known	chr1	+	1610	8	FSM	ENSG00000180098.9	ENST00000491577.5	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	12.2641005893341	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTACAACACTGCTGC	11	True	NA	39	True	NA	NA	NA	28553105	28577764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_29830.nic	chr12	-	824	4	Fusion	ENSG00000226091.7_ENSG00000284673.1	novel	662	2	NA	NA	46	0	multi-exon	FALSE	canonical	3	10	junction_2	9.62635271879577	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	NA	False	NA	3	True	TATAAA	-23	NA	8396757	8356962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_8357142_8390269_8390512_8390901_8390970_8396422
transcript_29831.nic	chr12	-	950	4	NIC	ENSG00000226091.7	novel	2157	7	NA	NA	46	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	9.39266853573691	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	8396757	8384116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_8384422_8390269_8390512_8390901_8390970_8396422
transcript_29834.known	chr12	-	662	2	FSM	ENSG00000226091.7	ENST00000420040.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	5962	False	NA	3	True	TATAAA	-23	NA	8390752	8356962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8357142_8390269
transcript_29835.known	chr12	-	456	2	FSM	ENSG00000226091.7	ENST00000536539.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	6294	False	NA	NA	False	AATAAA	-19	NA	8390420	8384116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8384422_8390269
transcript_29836.nnic	chr12	-	513	2	NNC	ENSG00000226091.7	novel	3033	5	NA	NA	41	-11313	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	8396762	8395429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_8395603_8396422
transcript_2984.known	chr1	+	2040	5	FSM	ENSG00000180098.9	ENST00000495995.5	2040	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	109.639180952796	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAATG	-8	True	NA	NA	False	NA	NA	NA	28553086	28565790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702
transcript_2985.known	chr1	-	719	4	FSM	ENSG00000197989.15	ENST00000464612.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	18.624953392932	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	859	False	NA	NA	False	AATAAA	-28	NA	28581010	28578537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559
transcript_2986.known	chr1	-	1438	7	FSM	ENSG00000120656.14	ENST00000495422.2	1438	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	234.626417002765	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTTATATGCCTAAAAA	5185	False	28643102	NA	False	NA	NA	NA	28643085	28602849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28623945_28624031_28642991
transcript_29870.known	chr12	+	620	2	FSM	ENSG00000256552.2	ENST00000537764.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCATTTCTTTTTCTTCT	35	False	NA	94	True	NA	NA	NA	8320380	8369555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8320427_8368981
transcript_29877.known	chr12	-	2872	10	FSM	ENSG00000197614.11	ENST00000359478.7	2872	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.34256066373273	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTCTTCTATGTTTA	-1	True	NA	NA	False	AATAAA	-19	NA	8662826	8645942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8648204_8649500_8649575_8650501_8650590_8651661_8651692_8654436_8654482_8655414_8655448_8655785_8655831_8660862_8660899_8662046_8662107_8662626
transcript_29878.known	chr12	-	1195	9	FSM	ENSG00000197614.11	ENST00000396549.6	1195	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.05326872164704	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGCCTGGCAAGTCTT	-1	True	NA	NA	False	NA	NA	NA	8662826	8647589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8648204_8649500_8649575_8650501_8650590_8654436_8654482_8655414_8655448_8655785_8655831_8660862_8660899_8662046_8662107_8662626
transcript_29879.known	chr12	-	470	8	FSM	ENSG00000197614.11	ENST00000538694.5	470	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.38505138783324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTCTGTGATCATTGAAA	4309	False	NA	NA	False	NA	NA	NA	8658578	8648101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8648204_8649500_8649575_8650501_8650590_8651661_8651692_8654436_8654482_8655414_8655448_8655785_8655831_8658525
transcript_29881.nnic	chr12	+	703	4	Antisense	novelGene_ENSG00000197614.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.05480466765633	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAACAGTATATTTCTG	5792	False	NA	NA	False	ATTAAA	-7	NA	8640136	8648434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_8640309_8641279_8641368_8647151_8647257_8648096
transcript_29883.nnic	chr12	+	610	3	Antisense	novelGene_ENSG00000197614.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTGAGTATTAAAATG	5792	False	NA	NA	False	ATTAAA	-19	NA	8640136	8648446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_8640309_8641279_8641368_8648096
transcript_29887.nnic	chr12	+	2117	10	NNC	ENSG00000166532.16	novel	1519	8	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_7	308.50791854095	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	30	True	NA	26	True	AATAAA	-26	NA	8697936	8783095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8776766_8777062_8777589_8777803_8780574_8780740_8782911
transcript_29889.known	chr12	+	1589	9	FSM	ENSG00000166532.16	ENST00000544257.5	1589	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	320.465067324038	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	36	False	NA	26	True	AATAAA	-26	NA	8681690	8783095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8681819_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_29892.nic	chr12	+	1822	9	NIC	ENSG00000166532.16	novel	1519	8	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_6	296.76545347294	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	30	True	NA	26	True	AATAAA	-26	NA	8697936	8783095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_29896.known	chr12	+	4931	6	FSM	ENSG00000166532.16	ENST00000535829.6	4931	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	20.2227594556233	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	12	True	NA	10	True	AATATA	-21	NA	8697990	8777191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_29898.known	chr12	+	640	4	FSM	ENSG00000166532.16	ENST00000542232.6	640	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	480.556852920535	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	346	False	NA	26	True	AATAAA	-26	NA	8777589	8783095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8777803_8780034_8780113_8780574_8780740_8782911
transcript_29899.known	chr12	+	650	3	FSM	ENSG00000166532.16	ENST00000510357.2	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	493.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	2568	False	NA	26	True	AATAAA	-26	NA	8779811	8783095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8780113_8780574_8780740_8782911
transcript_2990.known	chr1	-	1359	6	FSM	ENSG00000120656.14	ENST00000263974.4	1359	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	194.431067476368	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACAGGGTACCTTTG	5265	False	NA	-8	True	AATAAA	-13	NA	28643005	28603100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642654
transcript_29900.known	chr12	+	1893	2	FSM	ENSG00000166532.16	ENST00000504495.6	1893	2	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	1787	False	NA	26	True	AATAAA	-26	NA	8779030	8783095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8780740_8782911
transcript_29903.known	chr12	+	5390	15	FSM	ENSG00000111752.11	ENST00000544916.6	5390	15	0	0	0	0	multi-exon	FALSE	canonical	3	2180	junction_5	423.199113652094	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	20	True	NA	22	True	ATTAAA	-21	NA	8914508	8941467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_29909.known	chr12	-	2450	7	FSM	ENSG00000003056.8	ENST00000000412.8	2450	7	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_2	38.903370319578	2738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTGTCATTTGTGTG	6	True	NA	NA	False	ATTAAA	-17	NA	8949645	8940360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8941941_8942415_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_29917.known	chr12	+	641	6	FSM	ENSG00000111752.11	ENST00000544539.5	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	1245.07365243989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTGCAGTCCAGCAG	-1	True	NA	NA	False	NA	NA	NA	8914772	8922720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922638
transcript_29928.known	chr12	-	660	4	FSM	ENSG00000003056.8	ENST00000544245.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	337.058188184506	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGCAATCGACACACCCT	239	False	NA	NA	False	NA	NA	NA	8949735	8943824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8943911_8945417_8945585_8946228_8946388_8949487
transcript_29941.known	chr12	-	648	3	FSM	ENSG00000003056.8	ENST00000540837.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	34	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACAGTTGTGCATTAA	-4	True	NA	NA	False	AATATA	-43	NA	8949610	8945236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8945585_8946228_8946406_8949487
transcript_29942.known	chr12	+	701	2	FSM	ENSG00000249790.3	ENST00000654855.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGCTTGACCTTTTC	50	False	NA	NA	False	NA	NA	NA	8788269	8790183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8788787_8789999
transcript_29945.nnic	chr12	+	680	2	Antisense	novelGene_ENSG00000256661.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	9445	False	NA	26	True	ATTAAA	-21	NA	8805123	8810540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_8805430_8810166
transcript_29948.known	chr12	-	386	2	FSM	ENSG00000256904.1	ENST00000394240.3	386	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGTGGTGCAGCCAGGG	NA	False	NA	NA	False	NA	NA	NA	8820713	8819815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8820074_8820585
transcript_29953.known	chr12	+	723	2	FSM	ENSG00000249790.3	ENST00000422780.3	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	1068	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTCCCAACAGCAGTT	37	False	NA	NA	False	NA	NA	NA	8788256	8794497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8788787_8794304
transcript_29954.known	chr12	+	618	6	FSM	ENSG00000111752.11	ENST00000538657.5	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	1134.51850579883	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAACTCATCCTGATGC	14	False	NA	NA	False	NA	NA	NA	8913895	8922691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8913951_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632
transcript_2996.known	chr1	+	1950	2	FSM	ENSG00000188060.8	ENST00000373826.3	1950	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATCTCAGAATCTGCC	NA	False	NA	4	True	AATAAA	-15	NA	28592199	28595443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28592400_28593693
transcript_29967.known	chr12	+	592	5	FSM	ENSG00000139187.10	ENST00000539240.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.65660395791398	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCGGTGCCATCAAC	-31	True	NA	NA	False	NA	NA	NA	8950043	9009448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8950237_8992205_8992311_8995118_8995289_9008974_9009076_9009425
transcript_29983.known	chr12	+	427	4	FSM	ENSG00000139187.10	ENST00000544226.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.07106781186548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGAAGGTCAGACTTTG	32	True	NA	NA	False	NA	NA	NA	8950106	9009516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8950237_8992205_8992311_9008974_9009076_9009425
transcript_2999.known	chr1	+	624	2	FSM	ENSG00000229388.1	ENST00000420776.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTCACCTTTACCA	NA	False	NA	NA	False	AATAAA	-13	NA	28643227	28648530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28643518_28648196
transcript_29993.known	chr12	+	851	3	FSM	ENSG00000139187.10	ENST00000538029.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	11	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTAGCTATTTGGGAA	50	False	NA	NA	False	AATAAA	-28	NA	8950124	9010063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8950237_9008974_9009076_9009425
transcript_29994.known	chr12	+	1398	3	FSM	ENSG00000245105.4	ENST00000648157.1	1398	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTTCTGTGATCAGGAA	29	False	NA	NA	False	AATAAA	-25	NA	9065201	9068684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_9065229_9065825_9066061_9067548
transcript_3.known	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7656	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00004_+_0_500
transcript_30.known	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00071_+_0_600
transcript_30011.nnic	chr12	-	1154	9	NNC	ENSG00000256673.1	novel	400	4	NA	NA	7296	1298	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	8.99913190257816	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATGACTTTTTTTTCTT	NA	False	NA	1	True	ATTAAA	-21	NA	9407555	9397056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_9397215_9397614_9397690_9398381_9398485_9399794_9399864_9400235_9400327_9401746_9401860_9402426_9402633_9406307_9406399_9407307
transcript_3002.known	chr1	+	1912	10	FSM	ENSG00000162419.13	ENST00000294409.2	1912	10	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_1	12.4731811064211	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAATC	1	True	NA	-75	True	NA	NA	NA	28668779	28714873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28668840_28683582_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_30035.nnic	chr12	+	1201	3	NNC	ENSG00000284634.1	novel	999	6	NA	NA	-352	-128683	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATTCTCTGTGACATA	NA	False	NA	NA	False	ATTAAA	-31	NA	9447942	9466192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_9448879_9461323_9461435_9466038
transcript_3004.known	chr1	+	6358	10	FSM	ENSG00000162419.13	ENST00000373816.6	6358	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.7284080571728	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	5	True	NA	18	True	AATAAA	-22	NA	28668783	28719353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_30042.nnic	chr12	+	753	5	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-150	130	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	12.3364297914753	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGTTAAGATGCACT	2595	False	NA	7	True	AATAAA	-18	NA	9647896	9657217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656567_9656698_9656920
transcript_30045.known	chr12	+	587	5	FSM	ENSG00000256594.9	ENST00000574035.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.6903632845132	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATCTACATGAACAGAAAA	16	True	NA	NA	False	NA	NA	NA	9648166	9656982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_9648329_9653682_9653809_9655872_9655980_9656567_9656698_9656920
transcript_30048.nnic	chr12	+	2303	4	Fusion	ENSG00000257027.1_ENSG00000256594.9	novel	439	4	NA	NA	-150	485	multi-exon	FALSE	canonical	3	16	junction_1	11.8133634311129	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGCGTAAAATGCCTT	2595	False	NA	NA	False	NA	NA	NA	9647896	9658897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_+_9647990_9653682_9653809_9655872_9655980_9656920
transcript_30049.nnic	chr12	+	623	4	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-150	130	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	11.8133634311129	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGTTAAGATGCACT	2595	False	NA	7	True	AATAAA	-18	NA	9647896	9657217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656920
transcript_30051.nic	chr12	+	767	4	NIC	ENSG00000256594.9	novel	587	5	NA	NA	-10	130	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	17.2046505340853	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGTTAAGATGCACT	2790	False	NA	7	True	AATAAA	-18	NA	9648091	9657217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_9648329_9653682_9653809_9655872_9655980_9656920
transcript_30053.known	chr12	+	2612	4	FSM	ENSG00000256594.9	ENST00000575094.5	2612	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	13.9283882771841	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAAGCATTTGCTT	2745	False	NA	NA	False	GATAAA	-16	NA	9648046	9658412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_9648934_9653682_9653809_9655872_9655980_9656920
transcript_30062.nnic	chr12	-	698	3	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21308	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGAGTTAATTGCCTC	NA	False	NA	-7	True	AATAAA	-15	NA	9911039	9898675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_9898977_9900827_9900876_9910690
transcript_30063.nnic	chr12	-	868	3	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21266	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGGAGTTAATTGCCT	NA	False	NA	-8	True	AATAAA	-14	NA	9911081	9898676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_9898977_9905223_9905401_9910690
transcript_30065.nnic	chr12	-	655	2	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21303	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGAGTTAATTGCCTC	NA	False	NA	-7	True	AATAAA	-15	NA	9911044	9898675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_9898977_9910690
transcript_30071.known	chr12	+	531	5	FSM	ENSG00000139112.11	ENST00000544284.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	182.636763823717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGAAGGTGAAGACATC	0	True	NA	NA	False	NA	NA	NA	10212853	10221950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10212945_10213141_10213220_10218062_10218142_10220439_10220559_10221786
transcript_30073.known	chr12	+	1883	4	FSM	ENSG00000139112.11	ENST00000266458.10	1883	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	12.8322510366134	3890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGAGTTCAGCAATGT	-31	True	NA	20	True	AATAAA	-21	NA	10212876	10223128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213220_10218062_10218142_10220439_10220559_10221786
transcript_30074.known	chr12	+	2294	4	FSM	ENSG00000139112.11	ENST00000546017.5	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	186.719635341927	2450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	1	True	NA	15	True	AATAAA	-16	NA	10213428	10223123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10214188_10218062_10218142_10220439_10220559_10221786
transcript_30075.known	chr12	+	1700	4	FSM	ENSG00000139112.11	ENST00000539170.5	1700	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196.134307724749	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCTTACCTTAAAAATC	12	False	NA	2	True	AATAAA	-3	NA	10213439	10223110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213618_10218062_10218142_10220439_10220559_10221786
transcript_30077.known	chr12	+	855	3	FSM	ENSG00000139112.11	ENST00000421801.6	855	3	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_2	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAGGAAGTGATTCCT	336	False	NA	NA	False	NA	NA	NA	10212835	10220831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213220_10218062_10218142_10220439
transcript_30078.known	chr12	+	584	3	FSM	ENSG00000139112.11	ENST00000541453.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	201.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCGCGACATGGGGAAA	-31	True	NA	NA	False	NA	NA	NA	10212876	10221908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213220_10220439_10220559_10221786
transcript_30079.known	chr12	+	2321	6	FSM	ENSG00000139112.11	ENST00000540424.5	2321	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	200.153541062855	2419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	-11	True	NA	15	True	AATAAA	-16	NA	10212896	10223123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213220_10213835_10214188_10214668_10214780_10218062_10218142_10220439_10220559_10221786
transcript_30080.nic	chr12	-	958	2	ISM	ENSG00000256288.1	ENST00000539009.1	649	3	1426	0	1426	0	3prime_fragment	FALSE	canonical	3	25	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTCTTCGTATATT	NA	False	NA	-15	True	AATAAA	-20	NA	10336866	10332860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_10333064_10336111
transcript_30081.known	chr12	-	649	3	FSM	ENSG00000256288.1	ENST00000539009.1	649	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTCTTCGTATATT	NA	False	NA	-15	True	AATAAA	-20	NA	10338292	10332860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10333064_10336111_10336310_10338044
transcript_30087.nnic	chr12	+	1684	5	NNC	ENSG00000245648.2	novel	2830	4	NA	NA	-28527	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.77491721763537	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTGGTATTGATCCTT	NA	False	NA	8	True	TATAAA	-20	NA	10335110	10379883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_10336278_10363874_10364034_10370378_10370453_10374034_10374137_10379701
transcript_30092.nnic	chr12	+	599	4	NNC	ENSG00000245648.2	novel	2830	4	NA	NA	-27516	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.85861230093008	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTGGTATTGATCCTT	NA	False	NA	8	True	TATAAA	-20	NA	10336121	10379883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_10336278_10363874_10364034_10374034_10374137_10379701
transcript_30095.nnic	chr12	+	706	4	NIC	ENSG00000245648.2	novel	493	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.32049379893857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTGGTATTGATCCTT	-4	True	NA	8	True	TATAAA	-20	NA	10363708	10379883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_10364034_10373040_10373138_10374034_10374137_10379701
transcript_30096.known	chr12	+	769	3	FSM	ENSG00000245648.2	ENST00000666750.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTGTTATTGTTT	-5	True	NA	NA	False	AGTAAA	-12	NA	10363707	10380042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10364034_10374034_10374137_10379701
transcript_30097.known	chr12	+	493	4	FSM	ENSG00000245648.2	ENST00000663376.1	493	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.32049379893857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTGGTATTGATCCTT	NA	False	NA	8	True	TATAAA	-20	NA	10363637	10379883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10363688_10363874_10364034_10374034_10374137_10379701
transcript_3010.known	chr1	+	2063	9	FSM	ENSG00000162419.13	ENST00000480454.1	2063	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	10.7819293264239	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCATTTCCAGGCTCGT	NA	False	NA	117	True	NA	NA	NA	28683563	28715065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_30104.known	chr12	-	705	6	FSM	ENSG00000111196.10	ENST00000540074.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	460.660221855545	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGTATATTTAATTA	9	True	NA	4	True	ATTAAA	-25	NA	10613591	10606259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613540
transcript_30105.known	chr12	-	868	6	FSM	ENSG00000111196.10	ENST00000545236.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	449.71172988927	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCAGGCTGTTTGTA	-9	True	NA	-6	True	ATTAAA	-15	NA	10613609	10606269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10612639_10612979_10613438
transcript_30119.known	chr12	-	666	5	FSM	ENSG00000111196.10	ENST00000539554.5	666	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	418.270247567288	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	9	True	NA	-10	True	AATAAA	-16	NA	10613591	10606012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613540
transcript_30123.known	chr12	-	2606	5	FSM	ENSG00000111196.10	ENST00000320756.7	2606	5	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	52.9404146187013	3016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTTTCCAAGTACT	-9	True	NA	NA	False	AATAAA	-18	NA	10613609	10604192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
transcript_30124.known	chr12	-	1057	6	FSM	ENSG00000111196.10	ENST00000544850.5	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	443.520732322628	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	6	True	NA	-10	True	AATAAA	-16	NA	10613594	10606012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613438
transcript_30126.known	chr12	-	2771	11	FSM	ENSG00000060140.9	ENST00000075503.8	2771	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	1.8	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGACCTTTCATATATT	7	True	NA	-6	True	AATAAA	-32	NA	10674052	10618922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10620349_10621875_10621973_10622637_10622679_10624650_10624860_10627640_10627725_10629492_10629675_10631044_10631309_10633989_10634125_10634566_10634687_10637070_10637197_10673965
transcript_30129.known	chr12	-	685	4	FSM	ENSG00000060138.13	ENST00000544622.4	685	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	1920.38821306758	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTGCTTTTCTGCTT	5928	False	NA	-6	True	ATTAAA	-16	NA	10718121	10710350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10710789_10713210_10713334_10715693_10715784_10718087
transcript_30139.nnic	chr12	-	926	4	Fusion	ENSG00000255837.2_ENSG00000231887.8	novel	534	3	NA	NA	-34	0	multi-exon	FALSE	canonical	2	9	junction_2	11.4697670227235	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGTGTACATTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	11171642	10995960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10996326_11047019_11047189_11121009_11121181_11171421
transcript_30146.nnic	chr12	-	925	3	NNC	ENSG00000231887.8	novel	384	2	NA	NA	-34	34466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAAGTGTAGACTCTTC	NA	False	NA	NA	False	AATAAA	-36	NA	11171642	11086369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_11086903_11121009_11121181_11171421
transcript_30147.known	chr12	-	384	2	FSM	ENSG00000231887.8	ENST00000541175.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAATGACTGTCAATC	150	False	NA	NA	False	NA	NA	NA	11171460	11120835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_11121181_11171421
transcript_3015.known	chr1	+	2744	5	FSM	ENSG00000198492.16	ENST00000373812.8	2744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	95.4761095772131	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	-11	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_30167.nic	chr12	-	1048	7	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	33.1913643387353	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171668	10845848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11034781_11034886_11047019_11047189_11171421
transcript_30174.nnic	chr12	-	1086	6	NIC	ENSG00000275778.2	novel	680	5	NA	NA	-68	20899	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	35.0975782640341	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAATTAGATCAATC	NA	False	NA	NA	False	AAAAAG	-4	NA	11171668	10824949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10825194_10847044_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_30176.nic	chr12	-	944	6	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	29.8020133548054	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171668	10845848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_30179.known	chr12	-	680	5	FSM	ENSG00000275778.2	ENST00000535024.6	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	29.9280386928379	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGCAGGAAGCATCAT	10	True	NA	NA	False	NA	NA	NA	11171600	10847138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_3018.nnic	chr1	+	587	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	-65	12	combination_of_known_splicesites	FALSE	canonical	3	73	junction_3	514.0972670614	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAACTAAACA	61	False	NA	NA	False	AATGAA	-9	NA	28736874	28769137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
transcript_30185.nnic	chr12	-	1599	4	NIC	ENSG00000212127.6	novel	1662	5	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	43.0529389885935	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTTTGCTGTTTAT	-6	True	NA	-2	True	AATAAA	-18	NA	11171616	10937409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10938578_10973654_10973722_11047019_11047189_11171421
transcript_30186.nnic	chr12	-	1274	4	Fusion	ENSG00000231887.8_ENSG00000212125.2	novel	534	3	NA	NA	-60	621	multi-exon	FALSE	canonical	1	6	junction_1	42.2873766297015	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAATACATTTTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	11171668	10963803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10964595_10973654_10973722_11047019_11047189_11171421
transcript_30189.nic	chr12	-	779	3	ISM	ENSG00000231887.8	ENST00000541977.5	507	5	-124	90772	-60	-75	5prime_fragment	FALSE	canonical	3	48	junction_1	30.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAAAGAAATACAATCCA	NA	False	NA	NA	False	NA	NA	NA	11171668	10973358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_10973722_11047019_11047189_11171421
transcript_3019.nnic	chr1	+	1251	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	-91	0	combination_of_known_splicesites	FALSE	canonical	3	73	junction_3	514.0972670614	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	35	False	NA	22	True	AATAAA	-23	NA	28736848	28769775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
transcript_30190.nnic	chr12	-	781	3	Fusion	ENSG00000255837.2_ENSG00000231887.8	novel	534	3	NA	NA	-60	0	multi-exon	FALSE	canonical	3	37	junction_1	36	117	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGTGTACATTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	11171668	10995960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10996326_11047019_11047189_11171421
transcript_30191.nnic	chr12	-	1229	3	Fusion	ENSG00000212124.2_ENSG00000231887.8	novel	534	3	NA	NA	-60	737	multi-exon	FALSE	canonical	3	13	junction_1	48	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGATGTCAAGTATTTC	NA	False	NA	1	True	ATTAAA	-22	NA	11171668	11020881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_11021695_11047019_11047189_11171421
transcript_30194.nnic	chr12	-	732	5	Fusion	ENSG00000111215.12_ENSG00000231887.8	novel	563	4	NA	NA	-17	0	multi-exon	FALSE	canonical	0	0	junction_4	17.1464281994822	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	-15	True	NA	2	True	AATAAA	-18	NA	11171625	10845848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11171421
transcript_30195.nnic	chr12	-	831	5	Fusion	ENSG00000111215.12_ENSG00000231887.8	novel	563	4	NA	NA	-14	0	multi-exon	FALSE	canonical	0	0	junction_3	40.2763888649417	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	-12	True	NA	2	True	AATAAA	-18	NA	11171622	10845848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10845951_10847044_10847368_10848371_10848408_11047019_11047189_11171421
transcript_30197.known	chr12	-	994	3	FSM	ENSG00000111215.12	ENST00000539285.2	994	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCAGTATACCAATAAAAT	498	False	NA	-33	True	NA	NA	NA	10848975	10845883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10845951_10847044_10847368_10848371
transcript_30199.known	chr12	-	1662	5	FSM	ENSG00000212127.6	ENST00000381852.4	1662	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	43.1451040096092	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTGCTGTTTATTA	-1	True	NA	0	True	AATAAA	-20	NA	11171573	10937407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10938578_10973654_10973722_11034781_11034886_11047019_11047189_11171421
transcript_302.known	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2494	junction_10	2994.81247326106	5558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_3020.known	chr1	+	2719	4	FSM	ENSG00000198492.16	ENST00000541996.5	2719	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	593.048808184359	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	-11	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28737148_28738258_28738339_28742402_28743987_28768928
transcript_30202.known	chr12	+	4823	1	FSM	ENSG00000256537.5	ENST00000622602.2	4823	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1265	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTTATGGTATTTTTT	-19	True	NA	8	True	AATAAA	-20	NA	11171193	11176016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_11171200_11176000
transcript_3022.nic	chr1	+	1923	4	NIC	ENSG00000198492.16	novel	358	3	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_1	550.75120416472	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAAGA	641	False	NA	NA	False	NA	NA	NA	28737735	28769125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_28737798_28738258_28738339_28742402_28743987_28768928
transcript_30239.nnic	chr12	-	1950	2	Antisense	novelGene_ENSG00000121380.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTTTACAATGTTATCA	NA	False	NA	NA	False	NA	NA	NA	12061256	11890126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_11891598_12060777
transcript_30244.known	chr12	+	1897	6	FSM	ENSG00000121380.12	ENST00000308721.9	1897	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.89736659610103	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTTCTGATTAGTAA	-3	True	NA	NA	False	AATAAA	-25	NA	12070938	12099695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12071138_12079298_12079739_12087212_12087387_12090778_12090850_12094663_12094931_12098949
transcript_30247.nic	chr12	+	1009	4	ISM	ENSG00000121380.12	ENST00000396367.5	1886	6	15672	322	7841	-311	3prime_fragment	FALSE	canonical	2	4	junction_3	1.24721912892465	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTTTCTAGTACTATT	NA	False	NA	4	True	GATAAA	-18	NA	12087139	12099373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_12087387_12090778_12090850_12094663_12094931_12098949
transcript_30248.nic	chr12	+	1331	4	ISM	ENSG00000121380.12	ENST00000396367.5	1886	6	15672	0	7841	0	3prime_fragment	FALSE	canonical	2	4	junction_3	1.24721912892465	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTTCTGATTAGTAA	NA	False	NA	NA	False	AATAAA	-25	NA	12087139	12099695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_12087387_12090778_12090850_12094663_12094931_12098949
transcript_30255.known	chr12	-	5532	4	FSM	ENSG00000111261.14	ENST00000535902.6	5532	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	4.54606056566195	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGAGTATTCTATGATTTA	10	True	NA	NA	False	AATAAA	-25	NA	12350242	12326055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12330959_12338419_12338561_12343091_12343415_12350077
transcript_30256.known	chr12	-	1540	2	FSM	ENSG00000205791.4	ENST00000381800.4	1543	2	0	3	0	-3	multi-exon	FALSE	canonical	3	10	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGTCTGTCGCATCAAC	NA	False	NA	-2	True	AATAAA	-17	NA	12357067	12355405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12356806_12356927
transcript_30259.known	chr12	+	580	4	FSM	ENSG00000165714.11	ENST00000542728.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	40.9416929574514	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTGCCTGGGGCTGGG	-4	True	NA	NA	False	NA	NA	NA	12357078	12465783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12357119_12361205_12361350_12435627_12435786_12465545
transcript_30261.known	chr12	+	6422	4	FSM	ENSG00000165714.11	ENST00000314565.9	6422	4	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	16.1314048434171	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCCAGGACAATGCTG	-5	True	NA	NA	False	AATAAA	-27	NA	12357077	12471233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12357510_12361205_12361350_12435627_12435786_12465545
transcript_30266.known	chr12	+	3770	4	FSM	ENSG00000111269.3	ENST00000228865.3	3770	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	3.68178700572909	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGTTTGACTATTGT	-3	True	NA	17	True	ATTAAA	-18	NA	12611875	12645108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12612188_12635776_12635975_12637569_12637715_12641993
transcript_30278.known	chr12	+	2411	3	FSM	ENSG00000111276.12	ENST00000228872.9	2411	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	4.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGAGTCAAATTGTAA	-8	True	NA	14	True	AATAAA	-18	NA	12717367	12722369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12718315_12718824_12718955_12721035
transcript_30280.known	chr12	+	4335	2	FSM	ENSG00000111276.12	ENST00000614874.2	4335	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGGTAGAATAGGTT	-8	True	NA	NA	False	AATATA	-38	NA	12717367	12722212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12718315_12718824
transcript_30282.known	chr12	-	1751	2	FSM	ENSG00000183150.8	ENST00000540510.1	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTGATTAATGATTCA	7	True	NA	NA	False	CATAAA	-17	NA	12684521	12660890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12662471_12684350
transcript_30284.nnic	chr12	+	1127	3	NNC	ENSG00000178878.13	novel	574	4	NA	NA	-130	-64115	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	2.5	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCTATTCCATTTTAC	-9	True	NA	NA	False	AATAAA	-19	NA	12725786	12727351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_12726097_12726296_12726374_12726611
transcript_30290.known	chr12	+	1698	11	FSM	ENSG00000213782.7	ENST00000352940.8	1698	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	216.22083618375	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	5110	False	NA	27	True	AATAAA	-21	NA	12813315	12829979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_30291.known	chr12	+	2357	11	FSM	ENSG00000213782.7	ENST00000545038.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_6	52.3030591839521	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	1	True	NA	27	True	AATAAA	-21	NA	12813353	12829979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_30294.known	chr12	+	1817	12	FSM	ENSG00000213782.7	ENST00000358007.7	1817	12	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_6	52.3767344729469	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACTCCTTAAAGACCT	-7	True	NA	29	True	AATAAA	-23	NA	12813345	12829981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12823869_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_30295.known	chr12	+	759	1	FSM	ENSG00000241352.3	ENST00000475592.2	759	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTCGTGAGACGTTATCA	NA	False	NA	NA	False	NA	NA	NA	12850981	12851740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12851000_12851700
transcript_30296.known	chr12	+	609	1	FSM	ENSG00000234498.3	ENST00000459725.1	609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCCAATAAAGACTGTT	20	False	NA	NA	False	AATACA	-33	NA	12875498	12876107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12875500_12876100
transcript_30297.known	chr12	-	1159	4	FSM	ENSG00000013583.10	ENST00000014930.9	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	6.84754619472471	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATCATAAGTGTAATT	-14	True	NA	-8	True	AATAAA	-23	NA	13000265	12974869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12975480_12987151_12987333_12989276_12989416_13000036
transcript_30299.known	chr12	+	566	4	FSM	ENSG00000247498.11	ENST00000545914.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.9133717900592	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGAGCTCTAAGTGTGG	5	True	NA	NA	False	GATAAA	-15	NA	12927725	12980307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12927804_12978940_12979022_12979523_12979623_12979999
transcript_30302.known	chr12	+	740	3	FSM	ENSG00000247498.11	ENST00000543515.8	758	3	18	0	3	0	multi-exon	FALSE	canonical	3	27	junction_1	5.5	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGACAACCTTCTGTC	9	True	NA	102	True	AATACA	-28	NA	12927729	12980566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12927804_12979523_12979623_12979999
transcript_30307.known	chr12	+	838	4	FSM	ENSG00000247498.11	ENST00000660059.1	838	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.0489491367259	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTATGACAACCTTC	6	True	NA	98	True	AATACA	-24	NA	12927726	12980562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12927804_12966758_12966858_12979523_12979623_12979999
transcript_30314.nnic	chr12	+	1032	3	NNC	ENSG00000255621.1	novel	2403	5	NA	NA	-22	-16178	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	3.5	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTTCTTTGATTTTAT	-23	True	NA	2	True	AATAAA	-20	NA	13000428	13024501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_13000482_13022013_13022162_13023670
transcript_30315.nnic	chr12	+	442	3	NNC	ENSG00000255621.1	novel	2403	5	NA	NA	-22	-16178	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2.5	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTTCTTTGATTTTAT	-23	True	NA	2	True	AATAAA	-20	NA	13000428	13024501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_13000482_13022013_13022162_13024260
transcript_30317.known	chr12	+	4711	13	FSM	ENSG00000084444.14	ENST00000197268.13	4711	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_10	5.87130498460285	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	-9	True	NA	14	True	AATAAA	-18	NA	13044380	13083449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624
transcript_30318.nnic	chr12	+	2115	12	NIC	ENSG00000084444.14	novel	2623	14	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	18.7435939469886	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGCCATTCTCAT	-10	True	NA	16	True	AATAAA	-20	NA	13044379	13083451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13083002
transcript_30319.known	chr12	-	1628	6	FSM	ENSG00000111305.19	ENST00000396302.7	1628	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	4.74973683481517	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCTAGTTATTGGTCTG	-2	True	NA	NA	False	AGTAAA	-28	NA	13095806	13084576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_13085244_13087151_13087264_13087906_13088060_13088737_13088910_13090502_13090819_13095598
transcript_30322.nnic	chr12	-	690	3	NNC	ENSG00000111305.19	novel	1422	7	NA	NA	7702	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	4	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGTCTCTTGAGCATGG	7858	False	NA	-8	True	NA	NA	NA	13087946	13084824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_13085244_13087151_13087264_13087787
transcript_30323.nic	chr12	-	1162	3	ISM	ENSG00000111305.19	ENST00000396302.7	1628	6	7269	248	7111	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGTCTCTTGAGCATGG	7267	False	NA	-8	True	NA	NA	NA	13088537	13084824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_13085244_13087151_13087264_13087906
transcript_30324.known	chr12	+	2623	14	FSM	ENSG00000084444.14	ENST00000416494.6	2623	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	17.4996196070238	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	-9	True	NA	14	True	AATAAA	-18	NA	13044380	13083449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624_13080915_13083002
transcript_30326.known	chr12	-	2750	3	FSM	ENSG00000180861.9	ENST00000318426.6	2750	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAATGAAA	8	True	NA	NA	False	GATAAA	-43	NA	13376711	13371088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_13373439_13376223_13376426_13376513
transcript_30329.nnic	chr12	-	653	2	NNC	ENSG00000273079.7	novel	139	2	NA	NA	122263	440	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACAAGTTGAGAGTCGGT	NA	False	NA	NA	False	ATTAAA	-22	NA	13440028	13437501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_13438012_13439885
transcript_3033.known	chr1	+	5772	18	FSM	ENSG00000159023.22	ENST00000647103.1	5772	18	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	90.5757821845282	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTGTGAGGATTGAT	-23	True	NA	8	True	AATAAA	-16	NA	28887090	29120041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28887211_28987447_28987906_28993329_28993543_28997214_28997320_29011864_29011908_29015691_29015768_29018223_29018443_29030399_29030488_29033092_29033246_29035825_29035924_29039253_29039427_29053103_29053313_29064981_29065159_29097806_29097936_29109335_29109438_29112367_29112449_29115698_29115804_29116818
transcript_30335.nnic	chr12	+	776	4	Fusion	ENSG00000256306.1_ENSG00000287928.1	novel	382	2	NA	NA	-86363	0	multi-exon	FALSE	canonical	1	2	junction_1	1.4142135623731	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGTTTTCTAAAAGAAT	NA	False	NA	27	True	AATAAA	-37	NA	13440490	13620077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_+_13440725_13530656_13530774_13615097_13615227_13619781
transcript_30337.nnic	chr12	+	658	3	NNC	ENSG00000287928.1	novel	627	3	NA	NA	-141539	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATGTTTTCTAAAAGAAT	NA	False	NA	27	True	AATAAA	-37	NA	13440491	13620077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_13440725_13615097_13615227_13619781
transcript_30338.known	chr12	+	8823	15	FSM	ENSG00000171681.13	ENST00000261168.9	8823	15	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	40.3800819762437	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGAGTACTCTGATTA	3	True	NA	35	True	AATAAA	-17	NA	14365681	14502930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
transcript_30341.known	chr12	+	4887	13	FSM	ENSG00000171681.13	ENST00000543189.5	4887	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	75.9850131422126	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCACTGACTCAAATGTT	14	True	NA	5	True	ATTAAA	-19	NA	14365692	14482653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
transcript_30343.nic	chr12	+	1388	2	ISM	ENSG00000171681.13	ENST00000545723.1	577	4	-51	13142	-39	-356	5prime_fragment	FALSE	canonical	3	356	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGATGAAACTTCTG	-2	True	NA	NA	False	NA	NA	NA	14365636	14425105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_14365828_14423908
transcript_30344.known	chr12	+	3563	11	FSM	ENSG00000171681.13	ENST00000537653.5	3563	11	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_2	30.0359784258812	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATAGAATCAAATCTT	-2	True	NA	NA	False	NA	NA	NA	14365676	14476432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14365828_14423908_14425474_14434336_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889
transcript_30346.known	chr12	-	1960	11	FSM	ENSG00000121316.11	ENST00000240617.10	1960	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	10.4809350727881	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	476	False	14567903	-6	True	AATAAA	-23	NA	14567883	14503660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
transcript_30357.nnic	chr12	+	892	3	NNC	ENSG00000214772.2	novel	657	5	NA	NA	42125	-24159	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	10	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTTAATGTGTAATGA	NA	False	NA	NA	False	AAGAAA	-1	NA	14707779	14733804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_14708223_14718034_14718076_14733396
transcript_30360.nnic	chr12	+	622	3	NNC	ENSG00000214772.2	novel	657	5	NA	NA	44408	-24159	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	6.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTTAATGTGTAATGA	NA	False	NA	NA	False	AAGAAA	-1	NA	14710062	14733804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_14710236_14718034_14718076_14733396
transcript_30361.nnic	chr12	-	890	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_2	11	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	14710342	14705456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14705913_14708056_14708159_14710010
transcript_30363.nnic	chr12	-	944	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	35	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	14710339	14705456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14705913_14708056_14708216_14710010
transcript_30365.nnic	chr12	-	1076	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	62	junction_1	92	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	14710342	14705456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14705913_14708056_14708345_14710010
transcript_30368.nnic	chr12	-	2011	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	132	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCATCCCTACTATTTT	NA	False	NA	NA	False	NA	NA	NA	14710279	14706473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14708216_14710010
transcript_3037.known	chr1	-	331	1	FSM	ENSG00000225616.2	ENST00000425821.2	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTGTTTTGGTCATTA	32	False	NA	NA	False	GATAAA	-45	NA	28982608	28982277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28982300_28982600
transcript_30370.nnic	chr12	-	2199	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	246	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTCATCCCTACTA	NA	False	NA	NA	False	NA	NA	NA	14710342	14706477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14708345_14710010
transcript_30372.nnic	chr12	-	1933	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	40	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGTCATCCCTACT	-10	False	NA	NA	False	NA	NA	NA	14710263	14706478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14708159_14710010
transcript_30375.nnic	chr12	-	546	3	NNC	ENSG00000197837.4	novel	448	2	NA	NA	151	26877	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTTTAGTTAGTTAG	5474	False	NA	NA	False	AATAAA	-32	NA	14770019	14741121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_14741477_14768938_14769010_14769899
transcript_30377.known	chr12	+	644	1	FSM	ENSG00000246705.5	ENST00000544848.3	620	1	-22	-2	-22	2	mono-exon	FALSE	NA	NA	NA	NA	NA	5166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAGAGAGCTGTGTAG	-6	True	NA	27	True	AATAAA	-17	NA	14774382	14775026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14774400_14775000
transcript_30384.known	chr12	-	4581	12	FSM	ENSG00000084463.8	ENST00000261167.7	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_3	103.796845443236	1111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAAGGGTTATTTATA	8	True	NA	-1	True	ATTAAA	-18	NA	14803478	14784581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_30386.known	chr12	+	1586	2	FSM	ENSG00000182993.5	ENST00000330828.3	1586	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAGTCTTTGGTTCTCA	-6	True	NA	NA	False	AAGAAA	-26	NA	14803669	14824415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14803752_14822911
transcript_30387.known	chr12	+	690	2	FSM	ENSG00000182993.5	ENST00000533472.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGCAAGAACCCAGGGTA	-10	True	NA	NA	False	NA	NA	NA	14803665	14904610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14803752_14904006
transcript_30388.known	chr12	-	1547	7	FSM	ENSG00000139055.7	ENST00000266397.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGGCTGGCATCTCTTTG	-5	True	NA	NA	False	AATAAA	-24	NA	14938537	14914038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14914783_14915488_14915687_14917177_14917304_14920931_14921049_14934855_14934994_14937951_14938053_14938414
transcript_30389.known	chr12	-	590	4	FSM	ENSG00000111348.9	ENST00000539131.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCCCTAGAACAAGAGG	-8	True	NA	NA	False	NA	NA	NA	14948896	14942369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14942722_14944775_14944840_14947872_14947950_14948799
transcript_30390.known	chr12	-	1174	6	FSM	ENSG00000111348.9	ENST00000228945.9	1174	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.22710574513201	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTGGCTGAGACCTT	-7	True	NA	-21	True	AATAAA	-13	NA	14961601	14942030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14942722_14944775_14944840_14947872_14947950_14949801_14949886_14950531_14950725_14961536
transcript_30392.known	chr12	+	727	4	FSM	ENSG00000139053.3	ENST00000266395.3	727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGTGAAGTTGTATTAA	7	True	NA	NA	False	AATAAA	-19	NA	14973041	14981865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14973087_14977971_14978147_14979178_14979220_14981399
transcript_30393.known	chr12	+	967	4	FSM	ENSG00000255727.2	ENST00000542689.2	967	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTTTTTTTAATATAA	NA	False	NA	NA	False	AATAAA	-29	NA	15001786	15006999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15001907_15002934_15003036_15005099_15005207_15006360
transcript_30395.known	chr12	-	2264	5	FSM	ENSG00000134533.6	ENST00000256953.6	2264	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGTAATCTTTCTTG	28	True	NA	-1	True	AATAAA	-25	NA	15221417	15107782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_15109518_15111343_15111418_15121062_15121120_15217428_15217604_15221194
transcript_30397.known	chr12	-	1383	4	FSM	ENSG00000134533.6	ENST00000546331.5	1383	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTTAAAATTTTATTT	28	True	NA	NA	False	NA	NA	NA	15221417	15108606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_15109518_15111343_15111418_15217428_15217604_15221194
transcript_30398.known	chr12	+	2095	9	FSM	ENSG00000151490.15	ENST00000543886.6	2095	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.3418742493994	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTGTTAGTTCATTT	22	False	NA	NA	False	TATAAA	-22	NA	15322521	15517067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15322802_15483973_15484248_15497244_15497404_15499441_15499595_15501619_15502064_15503907_15504070_15508570_15508768_15515497_15515619_15516762
transcript_30399.known	chr12	-	3873	21	FSM	ENSG00000151491.14	ENST00000644374.1	3873	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_19	5.62227711874824	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTTTCTGTCTCATT	-3	True	NA	-19	True	AATAAA	-21	NA	15789388	15620161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
transcript_3040.known	chr1	-	2300	6	FSM	ENSG00000116350.18	ENST00000373795.7	2300	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	44.2791147156309	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGGTGTTTGAATTGA	-30	True	NA	-14	True	AATAAA	-22	NA	29181900	29147742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29149227_29150102_29150193_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_30403.known	chr12	+	1442	11	FSM	ENSG00000023734.11	ENST00000025399.10	1442	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1026.04056450025	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAGCAAGCAGAGAAA	-2	True	NA	NA	False	NA	NA	NA	15882393	15903014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15882820_15883082_15883122_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_30408.known	chr12	+	1874	10	FSM	ENSG00000023734.11	ENST00000419869.7	1874	10	0	0	0	0	multi-exon	FALSE	canonical	3	2342	junction_5	133.778239201862	10946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	-9	True	NA	89	True	AATAAA	-18	NA	15882386	15903478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15882820_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_30417.known	chr12	+	1698	9	FSM	ENSG00000023734.11	ENST00000541731.1	1698	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	834.669161629325	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTTGTCTAAATAAAA	-5	True	NA	53	True	NA	NA	NA	15882390	15903442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15882820_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_30424.known	chr12	+	676	2	FSM	ENSG00000023734.11	ENST00000539887.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	2797	junction_1	0	1984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	NA	False	NA	89	True	AATAAA	-18	NA	15900898	15903478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15901013_15902916
transcript_30431.known	chr12	+	1644	9	FSM	ENSG00000023697.13	ENST00000428559.7	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_4	28.8920404263873	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGAATCTCTCTAGTT	-18	True	NA	111	True	ATTAAA	-25	NA	15911331	16037381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_30436.known	chr12	+	854	8	FSM	ENSG00000023697.13	ENST00000532964.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	169.353753656513	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGTTCCAGAAAAGTT	13	True	NA	-86	True	NA	NA	NA	15911362	16036751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_16032541_16032655_16036231_16036382_16036689
transcript_3044.known	chr1	-	1264	5	FSM	ENSG00000116350.18	ENST00000466448.4	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	235.644329445883	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGTGTCAAAGGAGCG	-12	True	NA	NA	False	NA	NA	NA	29181882	29148670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29149227_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_3045.known	chr1	-	8128	7	FSM	ENSG00000116350.18	ENST00000634348.1	8128	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	298.947459151827	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAGAAAAGAAT	8506	False	NA	-33	True	NA	NA	NA	29173494	29147852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29149227_29150102_29150193_29154695_29154911_29159373_29160518_29165889_29166065_29166728_29166867_29168502
transcript_30470.known	chr12	+	298	4	FSM	ENSG00000008394.13	ENST00000536371.5	298	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1713.74080757726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCTTGAAAATATTATTC	24	False	NA	NA	False	NA	NA	NA	16347141	16363806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347185_16354230_16354379_16357604_16357700_16363794
transcript_30473.known	chr12	+	933	4	FSM	ENSG00000008394.13	ENST00000542256.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	37.6563407675255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGTTTCTGATTATTCA	3	True	NA	NA	False	NA	NA	NA	16347653	16370408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347711_16357604_16357700_16367324_16367466_16369768
transcript_30480.known	chr12	+	365	4	FSM	ENSG00000008394.13	ENST00000540126.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1697.77265851468	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTATTCCATTTCTT	19	False	NA	NA	False	NA	NA	NA	16347796	16363814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347899_16354230_16354379_16357604_16357700_16363794
transcript_30486.known	chr12	+	546	3	FSM	ENSG00000008394.13	ENST00000540056.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	97.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTAAGAATTCTGTACT	0	True	NA	NA	False	AGTAAA	-43	NA	16347777	16364071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347899_16354230_16354379_16363794
transcript_30491.known	chr12	+	925	4	FSM	ENSG00000008394.13	ENST00000396210.8	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	203.960780543711	47876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTTTTATTTTT	-6	True	NA	27	True	AATAAA	-16	NA	16347644	16364410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347711_16354230_16354379_16357604_16357700_16363794
transcript_30492.known	chr12	+	551	2	FSM	ENSG00000008394.13	ENST00000537878.5	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATTTTCAGCTCTA	3	True	NA	NA	False	AAAACA	-19	NA	16347653	16354724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347711_16354230
transcript_30493.known	chr12	+	406	4	FSM	ENSG00000008394.13	ENST00000543076.5	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	1581.02526510138	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCTTACAGGTTGCT	-6	True	NA	NA	False	AATAGA	-37	NA	16347644	16363999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347711_16354230_16354271_16357604_16357700_16363794
transcript_30494.known	chr12	+	279	2	FSM	ENSG00000008394.13	ENST00000534835.5	279	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCGCAACATGGCCACC	-6	True	NA	NA	False	NA	NA	NA	16347644	16349106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347711_16348893
transcript_30504.known	chr12	-	2403	5	FSM	ENSG00000048540.16	ENST00000453727.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	36.4648803645371	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTCATGGTTAGGAG	3735	False	NA	NA	False	AAGAAA	-37	NA	16606440	16549374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16606338
transcript_30505.known	chr12	-	587	5	FSM	ENSG00000048540.16	ENST00000536172.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	41.0327613011847	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGATCTATCAACATCAC	2990	False	NA	NA	False	AATGAA	-23	NA	16607185	16551227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16607046
transcript_3051.nic	chr1	-	1463	11	NIC	ENSG00000116353.16	novel	2515	10	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_10	88.5013559218162	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	5505	False	NA	-2	True	AATAAA	-24	NA	29230958	29193816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29220837_29220922_29230730
transcript_30514.known	chr12	-	3515	5	FSM	ENSG00000048540.16	ENST00000441439.6	3515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	39.1814688341313	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTACATTTGGATTTA	-26	True	NA	-9	True	AATAAA	-24	NA	16608135	16548419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065_16606133_16607935
transcript_30527.known	chr12	-	3759	4	FSM	ENSG00000048540.16	ENST00000320122.10	3759	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	40.7785346584314	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTTTTACATTTGGA	0	True	NA	-13	True	AATAAA	-20	NA	16605379	16548423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16604864
transcript_30528.known	chr12	-	3393	4	FSM	ENSG00000048540.16	ENST00000537304.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	19.4821855949366	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGCACTTAATTGGC	-1	True	NA	0	True	AATAAA	-16	NA	16606162	16548371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065
transcript_30539.known	chr12	-	3227	4	NNC	ENSG00000048540.16	novel	3810	4	NA	NA	1336	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	46.3489182422009	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATTGCACTTAATTGG	9315	False	NA	-1	True	AATAAA	-15	NA	16600860	16548372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_16551328_16560412_16560539_16600713_16600722_16600722
transcript_30545.known	chr12	+	1954	4	FSM	ENSG00000052126.15	ENST00000540972.5	1954	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	167.0056552602	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGGTTCATTACT	9	True	NA	NA	False	AATAAA	-27	NA	19129751	19202003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19200324
transcript_30546.known	chr12	+	4238	26	FSM	ENSG00000052126.15	ENST00000299275.10	4238	26	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_18	30.6594194335118	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	4	True	NA	24	True	AATAAA	-17	NA	19129793	19376400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
transcript_30547.known	chr12	+	5099	9	FSM	ENSG00000139154.16	ENST00000398864.7	5099	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	37.3243804369209	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGTAACACTGCAGT	-18	True	NA	NA	False	ATTAAA	-29	NA	19439673	19522239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086_19518114_19518674
transcript_30548.known	chr12	+	5830	8	FSM	ENSG00000139154.16	ENST00000266508.14	5830	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	10.7133332910015	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGACATTTTGCATTTG	-23	True	NA	NA	False	ATTAAA	-17	NA	19439491	19522227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
transcript_30552.known	chr12	+	2533	9	FSM	ENSG00000139154.16	ENST00000360995.8	2533	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	51.5919991374632	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGCTTCAAATTGTAAC	69	False	NA	10	True	AATAAA	-15	NA	19440580	19520223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19440728_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086_19518114_19518674
transcript_30555.known	chr12	-	483	3	FSM	ENSG00000287075.2	ENST00000656578.2	486	3	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCCATGTTTCAGGTAC	15	False	NA	NA	False	AATAAA	-18	NA	20109893	20104589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_20104788_20105672_20105838_20109773
transcript_30556.known	chr12	+	780	3	FSM	ENSG00000139155.9	ENST00000535609.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAAAGTAGTCCTAGTG	-10	True	NA	NA	False	NA	NA	NA	20695570	20697496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_20695613_20695735_20695808_20696830
transcript_30558.known	chr12	+	812	3	FSM	ENSG00000139155.9	ENST00000497911.6	812	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTTTGTTATAGCCA	-20	True	NA	NA	False	NA	NA	NA	20695560	20700239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_20695613_20695735_20695808_20699551
transcript_30560.nnic	chr12	+	1122	4	NNC	ENSG00000134538.3	novel	2787	15	NA	NA	83430	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.44948974278318	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGATTGTCAAACAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21214623	21239796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_21214745_21222299_21222365_21224721_21224840_21238978
transcript_30562.nnic	chr12	+	1514	4	NNC	ENSG00000134538.3	novel	2787	15	NA	NA	83430	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.05480466765633	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGATTGTCAAACAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21214623	21239796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_21215137_21222299_21222365_21224721_21224840_21238978
transcript_30577.known	chr12	-	3834	12	FSM	ENSG00000084453.17	ENST00000480394.5	3834	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	3.75268498919096	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATGTTCTTTTTCATT	-3	True	NA	NA	False	AATAAA	-18	NA	21324681	21273941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21274587_21275359_21275425_21292163_21292337_21293944_21295793_21297403_21297569_21300347_21300570_21301170_21301270_21304426_21304574_21306881_21306989_21314548_21314682_21318781_21318924_21324593
transcript_30581.known	chr12	-	2572	16	FSM	ENSG00000004700.16	ENST00000421138.6	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_15	65.255055146879	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAGGATGTCCAATCT	44	True	NA	NA	False	NA	NA	NA	21501551	21469801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
transcript_30582.nic	chr12	-	3528	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_15	80.083289975708	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	NA	False	NA	-1	True	AATAAA	-23	NA	21501665	21468909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
transcript_30592.known	chr12	-	3745	15	FSM	ENSG00000004700.16	ENST00000444129.7	3745	15	0	0	0	0	multi-exon	TRUE	canonical	3	265	junction_14	30.2358923082066	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-40	True	NA	-1	True	AATAAA	-23	NA	21501635	21468909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
transcript_30593.nic	chr12	-	3503	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_14	82.8257329627473	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-41	True	NA	-1	True	AATAAA	-23	NA	21501636	21468909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
transcript_30594.nic	chr12	-	3453	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_14	85.3073674355006	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-41	True	NA	-1	True	AATAAA	-23	NA	21501636	21468909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501462
transcript_30607.known	chr12	+	4075	12	FSM	ENSG00000121350.16	ENST00000240651.14	4075	12	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	6.79572057855664	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTTACTTTTTTTT	-9	True	NA	NA	False	AATAAA	-36	NA	21437654	21471250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
transcript_3061.known	chr1	-	2416	10	FSM	ENSG00000116353.16	ENST00000373791.7	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	67.4190873071813	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTAATGCTGTAAAGA	-10	True	NA	-4	True	ATTAAA	-22	NA	29230924	29192872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216813_29230730
transcript_30611.known	chr12	+	1471	11	FSM	ENSG00000121350.16	ENST00000544970.5	1471	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.9178752511649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATCATATAAAGTTCCAA	-4	True	NA	NA	False	ACTAAA	-16	NA	21437704	21468770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
transcript_30618.nic	chr12	-	659	3	ISM	ENSG00000004700.16	ENST00000539672.1	579	5	-70	1238	0	-1238	intron_retention	FALSE	canonical	3	265	junction_2	44	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCCTGACAAAGAAAATAAA	NA	False	NA	NA	False	NA	NA	NA	21501663	21491612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_21491717_21499554_21499616_21501169
transcript_30619.known	chr12	-	932	7	FSM	ENSG00000004700.16	ENST00000396093.7	932	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	110.853882806753	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTACTCGAATTGCTGTG	NA	False	NA	NA	False	AAAAAG	-45	NA	21501669	21483441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
transcript_30620.known	chr12	+	933	4	FSM	ENSG00000111711.10	ENST00000542038.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	211.509390387808	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAGGAAACCCCAAT	-14	True	NA	1	True	TTTAAA	-6	NA	21501792	21516184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21508382_21508562_21512294_21512377_21515668
transcript_30622.known	chr12	+	813	3	FSM	ENSG00000111711.10	ENST00000535593.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	208.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATGGTTAAAATAAAAC	-26	True	NA	-14	True	ATTAAA	-45	NA	21501780	21516231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21512294_21512377_21515668
transcript_30625.known	chr12	+	3253	5	FSM	ENSG00000111711.10	ENST00000229314.10	3253	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	60.2598539659697	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCCAGTTTGTATA	-18	True	NA	NA	False	AATAAA	-37	NA	21501788	21518408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21506884_21506977_21508382_21508562_21512294_21512377_21515668
transcript_30626.known	chr12	+	1210	6	FSM	ENSG00000111711.10	ENST00000539025.5	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	215.259842980524	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAAAACTTTTGTGG	22	True	NA	-6	True	NA	NA	NA	21501828	21516239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21506884_21506977_21507943_21508110_21508382_21508562_21512294_21512377_21515668
transcript_30627.nic	chr12	-	941	7	ISM	ENSG00000111716.14	ENST00000350669.5	1303	8	-4	1727	-4	1299	5prime_fragment	FALSE	canonical	3	9895	junction_1	1048.83725302515	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAAACTACCACAAAAT	-6	True	NA	NA	False	NA	NA	NA	21657846	21637068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657750
transcript_30629.known	chr12	+	1826	3	FSM	ENSG00000134548.11	ENST00000535139.5	1826	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGGCACCTGTCATTA	298	False	NA	NA	False	ATTAAA	-17	NA	21527434	21532523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21527790_21529000_21529085_21531136
transcript_30644.known	chr12	-	1538	8	FSM	ENSG00000111716.14	ENST00000396076.5	1538	8	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_7	3915.96255011173	65161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	12	True	NA	-14	True	AATAAA	-19	NA	21657794	21635341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657467
transcript_30650.known	chr12	-	2274	3	FSM	ENSG00000121361.5	ENST00000240662.3	2274	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTAGTTTTGTGATT	3	True	NA	NA	False	ATTAAA	-15	NA	21774706	21764954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21766624_21773242_21773687_21774545
transcript_30653.known	chr12	-	9707	5	FSM	ENSG00000111728.11	ENST00000396037.9	9707	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	3.03108891324554	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAAGTCTTTTCATT	-8	True	NA	-7	True	AATAAA	-14	NA	22334707	22193390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_22202039_22249005_22249099_22255279_22255390_22287148_22287294_22333996
transcript_30654.known	chr12	-	1036	2	FSM	ENSG00000111728.11	ENST00000381424.3	1036	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGCCTGCTGAAA	-3	True	NA	NA	False	AGTAAA	-4	NA	22334671	22325098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_22325460_22333996
transcript_30655.known	chr12	+	1748	8	FSM	ENSG00000111726.13	ENST00000229329.7	1748	8	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_3	84.2493868444956	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGCCTTGTTGCTC	-7	True	NA	20	True	AATAAA	-21	NA	22046217	22065668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280_22061453_22062280_22062435_22065120
transcript_30657.known	chr12	+	1575	7	FSM	ENSG00000111726.13	ENST00000534981.5	1575	7	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_5	388.465642696437	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTGCTCTAGAAG	0	True	NA	26	True	AATAAA	-27	NA	22046224	22065674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22062280_22062435_22065120
transcript_30661.known	chr12	-	4585	27	FSM	ENSG00000111731.13	ENST00000446597.6	4585	27	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	43.0623601757419	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-31	True	NA	-35	True	AATAAA	-18	NA	22544542	22448582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22458483_22458586_22459491_22459543_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_30663.known	chr12	-	4436	25	FSM	ENSG00000111731.13	ENST00000333957.8	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_17	19.7102271817337	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-35	True	NA	-35	True	AATAAA	-18	NA	22544546	22448582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_30671.known	chr12	+	7063	8	FSM	ENSG00000139163.16	ENST00000266517.9	7063	8	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_4	16.4788051875178	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTCATAAATTTTATT	12	True	NA	11	True	AATAAA	-37	NA	22625170	22690665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22625587_22643762_22644023_22659013_22659155_22661062_22661206_22671271_22671356_22673499_22673661_22684482_22684557_22684881
transcript_30674.known	chr12	+	910	3	FSM	ENSG00000139163.16	ENST00000672951.1	910	3	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	63.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTTCTTTACGTTGT	-17	True	NA	13	True	ATTAAA	-23	NA	22625141	22644415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22625587_22643762_22644023_22644210
transcript_30675.known	chr12	+	1231	3	FSM	ENSG00000139163.16	ENST00000673496.1	1231	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	63	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTAGGGAAGGTCATTC	150	False	NA	NA	False	CATAAA	-41	NA	22625381	22657197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22625587_22643762_22644023_22656431
transcript_30676.known	chr12	+	617	2	FSM	ENSG00000139163.16	ENST00000545979.2	617	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGAAGGAGCAGTGGCT	125	False	NA	NA	False	ATTAAA	-27	NA	22625356	22626200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22625587_22625813
transcript_30702.nic	chr12	+	2589	12	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-191	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	26.5572825454403	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAATTGACACATGA	3476	False	NA	25	True	AATAAA	-35	NA	22699667	23174141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23167038_23167079_23173388
transcript_30716.nnic	chr12	+	2213	11	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-140	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	33.5840736063986	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAATTGACACATGA	3527	False	NA	25	True	AATAAA	-35	NA	22699718	23174141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_22700095_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054155_23057165_23057298_23057779_23057898_23167038_23167079_23173388
transcript_30744.nnic	chr12	+	2377	10	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-193	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	31.4787798405039	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTTATAAAGGAAAGA	3474	False	NA	7	True	AATAAA	-17	NA	22699665	23174123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_22700095_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054324_23057165_23057298_23057779_23057898_23173388
transcript_30766.nnic	chr12	+	1298	6	NNC	ENSG00000256995.8	novel	647	5	NA	NA	-140	-55191	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	38.5818610230248	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCAAGTCCGTGTGAAC	3527	False	NA	5	True	AATAAA	-17	NA	22699718	22999050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_22700095_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_22998664
transcript_30786.nic	chr12	+	1233	4	NIC	ENSG00000256995.8	novel	902	3	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	21.9139732185248	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGGATCGTTTGTT	3572	False	NA	NA	False	ATTAAA	-15	NA	22699763	22871078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_22700095_22861068_22861225_22869320_22869414_22870425
transcript_30787.nic	chr12	+	643	4	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_3	26.4491125665032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTATGGTATTCTGT	3592	False	NA	NA	False	AATAAA	-21	NA	22699783	22888933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_22700095_22861068_22861225_22887963_22888045_22888838
transcript_30797.nic	chr12	+	1060	4	NIC	ENSG00000256995.8	novel	902	3	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	8.5764535535124	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGGGATCGTTTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	22859387	22871078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_22859546_22861068_22861225_22869320_22869414_22870425
transcript_30798.nic	chr12	+	490	4	NIC	ENSG00000256995.8	novel	2064	12	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	26.1916017074176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTATGGTATTCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	22859387	22888933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_22859546_22861068_22861225_22887963_22888045_22888838
transcript_30799.nnic	chr12	+	539	3	NIC	ENSG00000256995.8	novel	647	5	NA	NA	-127	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTATGGTATTCTGT	3540	False	NA	NA	False	AATAAA	-21	NA	22699731	22888933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_22700095_22887963_22888045_22888838
transcript_30800.known	chr12	+	631	3	FSM	ENSG00000256995.8	ENST00000628326.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTACCTTTTGCAATT	85	False	NA	NA	False	ACTAAA	-25	NA	22700027	22732240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22700095_22723941_22724004_22731738
transcript_30805.nic	chr12	+	1286	2	ISM	ENSG00000256995.8	ENST00000536744.5	647	5	-275	100517	-193	56176	5prime_fragment	FALSE	canonical	3	35	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTATCTGTAT	3474	False	NA	NA	False	AAAACA	-33	NA	22699665	22788416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_22700095_22787559
transcript_30806.nic	chr12	+	870	2	ISM	ENSG00000256995.8	ENST00000629824.2	382	4	-238	179767	-143	-23094	5prime_fragment	FALSE	canonical	3	23	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAGAAA	3524	False	NA	NA	False	NA	NA	NA	22699715	22709146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_22700095_22708655
transcript_30807.known	chr12	+	647	5	FSM	ENSG00000256995.8	ENST00000536744.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	21.3702480097916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTCTATGGTATTCTGT	-2	True	NA	NA	False	AATAAA	-21	NA	22699940	22888933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22700095_22787559_22787721_22861068_22861225_22887963_22888045_22888838
transcript_30808.known	chr12	+	2064	12	FSM	ENSG00000256995.8	ENST00000538317.6	2064	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.8228100413156	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTAATTGACACATGA	7	False	NA	25	True	AATAAA	-35	NA	22859474	23174141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22859546_22861068_22861225_22887963_22888045_22969362_22969466_22970835_22971095_22972375_22972469_23046107_23046202_23053990_23054155_23057165_23057298_23057779_23057898_23167038_23167079_23173388
transcript_30814.nnic	chr12	+	891	3	Fusion	ENSG00000256923.1_ENSG00000256995.8	novel	424	2	NA	NA	-193	0	multi-exon	TRUE	canonical	1	4	junction_2	7.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTTCATATCAAGCCT	3474	False	NA	22	True	NA	NA	NA	22699665	22743091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_+_22700095_22742543_22742633_22742718
transcript_30818.known	chr12	+	424	2	FSM	ENSG00000256923.1	ENST00000537293.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTTCATATCAAGCCT	NA	False	NA	22	True	NA	NA	NA	22742581	22743091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22742633_22742718
transcript_30824.known	chr12	-	832	3	FSM	ENSG00000134532.19	ENST00000538905.1	832	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAAATATAAACAAAAACT	-3	True	NA	NA	False	AGTAAA	-4	NA	24562382	24367934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24368640_24407484_24407567_24562337
transcript_30829.known	chr12	-	1811	11	FSM	ENSG00000060982.15	ENST00000539282.5	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_10	200.0416206693	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATATCTGTTTTCTTC	9	True	NA	NA	False	NA	NA	NA	24903075	24817480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
transcript_30836.known	chr12	-	521	2	FSM	ENSG00000060982.15	ENST00000355164.3	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAAATGTTCCTACTGT	3	True	NA	NA	False	NA	NA	NA	24949061	24945430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24945817_24948926
transcript_30837.nnic	chr12	-	553	2	NNC	ENSG00000060982.15	novel	9314	11	NA	NA	-34	27758	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATATGTCATGGTATA	2921	False	24949159	NA	False	AATAAA	-21	NA	24949135	24917672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_24918017_24948926
transcript_3084.known	chr1	-	571	4	FSM	ENSG00000116353.16	ENST00000483435.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	16.1314048434171	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	NA	False	NA	-2	True	AATAAA	-24	NA	29200589	29193816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515
transcript_30840.known	chr12	-	9314	11	FSM	ENSG00000060982.15	ENST00000261192.12	9314	11	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_7	58.9882191628125	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGACTGTTTGTATCC	-37	True	NA	-7	True	AATAAA	-16	NA	24949101	24810023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
transcript_30841.known	chr12	-	1360	10	FSM	ENSG00000060982.15	ENST00000539780.5	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	208.745695601367	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAACTTACCTTAC	21	True	NA	5	True	AATGAA	-32	NA	24949043	24817808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24894274_24894476_24901813_24901886_24948926
transcript_30842.known	chr12	-	675	5	FSM	ENSG00000060982.15	ENST00000612790.1	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_4	47.2460315793824	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAGTGTTGAAATAATAT	5662	False	NA	NA	False	AATAAA	-21	NA	24881398	24836446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300
transcript_30843.known	chr12	-	5430	6	FSM	ENSG00000133703.14	ENST00000256078.10	5430	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	305.011868621534	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-15	True	NA	-4	True	AATAAA	-16	NA	25250929	25205245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25209912_25215436_25215561_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_30844.known	chr12	-	5306	5	FSM	ENSG00000133703.14	ENST00000311936.8	5306	5	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	52.6515669282501	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-15	True	NA	-4	True	AATAAA	-16	NA	25250929	25205245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25209912_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_30848.known	chr12	+	838	4	FSM	ENSG00000205707.11	ENST00000556351.6	838	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	56.5744347445617	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGCAAAATAATTTCTT	1	True	NA	NA	False	NA	NA	NA	25195271	25204666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_25195338_25203724_25203833_25203919_25204008_25204090
transcript_30852.known	chr12	+	1242	3	FSM	ENSG00000205707.11	ENST00000381356.9	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	1.5	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTCACTGGTATAC	-3	True	NA	138	True	AATAAA	-22	NA	25195236	25205143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_25195338_25203919_25204008_25204090
transcript_30853.known	chr12	+	874	2	FSM	ENSG00000205707.11	ENST00000556402.6	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATTTGGTATATTAAC	6	True	NA	NA	False	NA	NA	NA	25195276	25204732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_25195338_25203919
transcript_30854.known	chr12	+	538	2	FSM	ENSG00000205707.11	ENST00000555151.5	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTAATAGTTATTAGC	6	True	NA	NA	False	NA	NA	NA	25195276	25196184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_25195338_25195707
transcript_30864.known	chr12	-	698	4	FSM	ENSG00000246695.9	ENST00000500102.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	31.8852107828483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATTGTCAATGAATCAGA	2178	False	NA	NA	False	AATAAA	-18	NA	25957585	25954920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25957452
transcript_30865.known	chr12	-	3560	4	FSM	ENSG00000246695.9	ENST00000670839.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	17.326921891156	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCACCTTTGCACTCT	1222	False	NA	NA	False	NA	NA	NA	25958541	25952448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958018
transcript_30866.known	chr12	-	2999	4	FSM	ENSG00000246695.9	ENST00000663256.1	2999	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	29.5334085777823	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGTGCGCACCTG	1	True	NA	NA	False	AATACA	-12	NA	25959379	25952540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25959325
transcript_30867.known	chr12	-	1121	4	FSM	ENSG00000246695.9	ENST00000535436.6	1272	4	0	151	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	32.355662392986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAGGAATAAATTATGGA	-2	True	NA	-49	True	AATGAA	-28	NA	25959765	25954807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956765_25959325
transcript_3087.known	chr1	+	619	3	FSM	ENSG00000060656.20	ENST00000527027.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	50.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTGTCCTCACTAACC	-6	True	NA	NA	False	NA	NA	NA	29260180	29275685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_29260268_29260609_29260904_29275447
transcript_30873.known	chr12	-	815	4	FSM	ENSG00000246695.9	ENST00000542086.5	815	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	31.8852107828483	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAATAAATTATGGACTT	698	False	NA	-46	True	AATGAA	-31	NA	25959065	25954804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958931
transcript_30878.known	chr12	+	553	3	FSM	ENSG00000123096.12	ENST00000538142.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGGGTGTCAGGATA	0	True	NA	NA	False	NA	NA	NA	26121990	26231014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26122153_26224292_26224380_26230710
transcript_30880.known	chr12	+	4348	3	FSM	ENSG00000123096.12	ENST00000422622.3	4348	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGACGTGCTTTAAA	-6	True	NA	13	True	AATAAA	-23	NA	26195339	26234779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26195532_26224292_26224380_26230710
transcript_30882.known	chr12	+	4533	3	FSM	ENSG00000123096.12	ENST00000242729.7	4533	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTGGACGTGCTTTA	4	True	NA	11	True	AATAAA	-21	NA	26195572	26234777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26195952_26224292_26224380_26230710
transcript_30884.known	chr12	-	438	3	FSM	ENSG00000123095.6	ENST00000541271.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATAAGTTCCTGACT	8	True	NA	NA	False	AATAAA	-2	NA	26124899	26123987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26124180_26124518_26124583_26124717
transcript_30885.known	chr12	-	572	1	FSM	ENSG00000278095.1	ENST00000621404.1	572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGTCTATTGTATTAATA	873	False	NA	NA	False	AATAAA	-19	NA	26273900	26273328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26273300_26273900
transcript_30886.known	chr12	-	12564	57	FSM	ENSG00000123104.12	ENST00000381340.8	12564	57	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_35	12.1581704912325	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGTTTGCAATACTT	-16	True	NA	-24	True	AATAAA	-16	NA	26833194	26335351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26339484_26340166_26340329_26387433_26387595_26398875_26399042_26400127_26400259_26411319_26411413_26415302_26415499_26419048_26419214_26427912_26428089_26436220_26436347_26439126_26439320_26443542_26443651_26475295_26475419_26476911_26477008_26481130_26481242_26483697_26483899_26486103_26486361_26487067_26487252_26494152_26494341_26495151_26495261_26550246_26550356_26556232_26556376_26561761_26561953_26578712_26578834_26580026_26580156_26595464_26595591_26596882_26597135_26599144_26599346_26599986_26600110_26602369_26602496_26602616_26602707_26621122_26621297_26622239_26622406_26624298_26624357_26628032_26628163_26631865_26632060_26653975_26654127_26655707_26655853_26656296_26656549_26657706_26657893_26658010_26658131_26659112_26659286_26663684_26663847_26665909_26666052_26681873_26682035_26682573_26682674_26686480_26686633_26695605_26695651_26711172_26711269_26715298_26715446_26715751_26715836_26716143_26716243_26722396_26722556_26724655_26724743_26725649_26725766_26790156_26790228_26832689
transcript_30899.known	chr12	-	2634	17	FSM	ENSG00000064102.15	ENST00000261191.12	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_15	22.916884468662	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	17	True	NA	-19	True	AATAAA	-27	NA	26937981	26905180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_30907.nic	chr12	-	2833	16	NIC	ENSG00000064102.15	novel	2634	17	NA	NA	-25	0	intron_retention	FALSE	canonical	3	39	junction_5	92.4473664068131	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	NA	False	NA	-19	True	AATAAA	-27	NA	26938351	26905180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_30913.known	chr12	-	535	2	FSM	ENSG00000064102.15	ENST00000538016.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATTGGAGAATTACTT	NA	False	NA	-23	True	AATAAA	-23	NA	26906484	26905184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26905537_26906301
transcript_30914.known	chr12	+	2932	7	FSM	ENSG00000111790.14	ENST00000229395.8	2932	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	54.2107512911928	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	-4	True	NA	10	True	ATTAAA	-20	NA	26938469	26966648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960629_26963341_26963456_26964595
transcript_30917.known	chr12	+	2790	6	FSM	ENSG00000111790.14	ENST00000327214.5	2790	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	46.5978540278412	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCCAATTTAATTTGA	-8	True	NA	12	True	ATTAAA	-22	NA	26938499	26966650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26963341_26963456_26964595
transcript_3092.known	chr1	-	5360	22	FSM	ENSG00000134644.16	ENST00000257075.9	5360	22	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	98.3179856580416	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	1	True	NA	-2	True	AATACA	-16	NA	31065698	30931505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950132_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_30921.known	chr12	+	956	5	FSM	ENSG00000111790.14	ENST00000546072.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	37.7458607002145	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTTATAGGTTATT	-11	True	NA	NA	False	NA	NA	NA	26938496	26960846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514
transcript_30922.known	chr12	+	865	4	FSM	ENSG00000111790.14	ENST00000395941.4	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	10.3708994574027	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGTACGTTGAAAAAT	10	True	NA	NA	False	TATAAA	-24	NA	26938483	26957971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600
transcript_30926.known	chr12	-	4315	12	FSM	ENSG00000064115.11	ENST00000343028.9	4315	12	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_4	39.3937529133115	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTAAAAAGCCTCATTAAA	-30	True	NA	-5	True	AATAAA	-19	NA	27014384	26971578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014077
transcript_30937.known	chr12	+	578	4	FSM	ENSG00000152944.9	ENST00000536711.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	269.766977634814	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGATGTTGTTTATCGA	-3	True	NA	NA	False	AAGAAA	-22	NA	27022561	27028336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27022872_27026419_27026535_27027346_27027448_27028284
transcript_30938.known	chr12	+	1374	3	FSM	ENSG00000152944.9	ENST00000536503.5	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	260.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATATGCTGAGCTACAT	-15	True	NA	NA	False	GGGGCT	-9	NA	27022549	27029485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27022622_27027346_27027448_27028284
transcript_30942.known	chr12	+	414	1	FSM	ENSG00000152944.9	ENST00000621885.1	414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	6940	False	NA	20	True	ATTAAA	-22	NA	27030259	27030673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27030300_27030700
transcript_30943.known	chr12	+	2669	4	FSM	ENSG00000152944.9	ENST00000282892.4	2669	4	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	29.8923996285938	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	-7	True	NA	20	True	ATTAAA	-22	NA	27022557	27030673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284
transcript_30945.known	chr12	+	4957	14	FSM	ENSG00000211455.8	ENST00000389032.8	4957	14	0	0	0	0	multi-exon	FALSE	canonical	1	193	junction_7	91.4886742432794	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGATGAAGTTTTT	13	True	NA	14	True	AATAAA	-17	NA	27244285	27325959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503_27314659_27315014_27315118_27315288_27315351_27317335_27317454_27317895_27318020_27319327_27319424_27322142_27322235_27322327
transcript_30946.known	chr12	+	1843	15	FSM	ENSG00000029153.15	ENST00000261178.9	1843	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	5.61521257343816	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTCAACTATTCTTAAG	93	False	NA	18	True	TTTAAA	-20	NA	27333054	27420590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27333104_27368261_27368413_27380246_27380405_27385480_27385561_27387227_27387321_27389178_27389297_27390095_27390240_27400533_27400775_27401256_27401364_27401523_27401675_27402618_27402678_27403432_27403542_27415868_27415948_27418087_27418197_27420395
transcript_30948.known	chr12	+	3208	28	FSM	ENSG00000110841.14	ENST00000542629.5	3208	28	0	0	0	0	multi-exon	TRUE	canonical	2	48	junction_11	31.0393793865524	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGCACCTGGATGAACA	36	False	NA	NA	False	NA	NA	NA	27524223	27692882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27660883_27660946_27664361_27664438_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
transcript_30953.known	chr12	+	1191	10	FSM	ENSG00000110841.14	ENST00000545381.5	1191	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	52.654006917275	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTGGTGCATTTCC	1	False	NA	NA	False	AAAAAG	-17	NA	27524141	27658848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815
transcript_30954.nic	chr12	+	1125	9	ISM	ENSG00000110841.14	ENST00000545381.5	1191	10	-44	2195	-44	-470	5prime_fragment	FALSE	canonical	2	113	junction_4	36.2318920289846	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATCTGAAGTAAAAAGGC	NA	False	NA	NA	False	AAGAAA	-2	NA	27524097	27656653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615
transcript_30955.nic	chr12	+	1202	9	ISM	ENSG00000110841.14	ENST00000545381.5	1191	10	-44	2118	-44	-393	5prime_fragment	FALSE	canonical	2	113	junction_4	36.2318920289846	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAAGATATATTTCACA	NA	False	NA	NA	False	NA	NA	NA	27524097	27656730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615
transcript_30958.known	chr12	+	875	6	FSM	ENSG00000110841.14	ENST00000535047.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	2	113	junction_4	43.4695295580709	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGTAGTAGAGTCTCA	32	True	NA	NA	False	ATTAAA	-10	NA	27524219	27647977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728
transcript_30960.nnic	chr12	+	1670	5	NNC	ENSG00000110841.14	novel	875	6	NA	NA	-44	23	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	82.4086615593288	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGATGGGTAATGGC	NA	False	NA	NA	False	GATAAA	-43	NA	27524097	27637342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27636333
transcript_30961.known	chr12	+	2805	4	FSM	ENSG00000110841.14	ENST00000545334.5	2805	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	35.7988205888903	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAGTTGTTTTAAAT	-30	True	NA	NA	False	GATAAA	-20	NA	27524157	27637319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909
transcript_30966.known	chr12	+	557	5	FSM	ENSG00000061794.13	ENST00000536569.1	557	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	215.876556161154	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAGGAGAGCGATACTG	1	True	NA	NA	False	ATTAAA	-1	NA	27710821	27735500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27710956_27716290_27716459_27719807_27719869_27724046_27724187_27735446
transcript_30970.known	chr12	+	466	2	FSM	ENSG00000061794.13	ENST00000542791.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTTTTTTTCCTCA	26	False	NA	14	True	TATAAA	-15	NA	27710846	27755537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27710956_27755180
transcript_30972.known	chr12	+	1829	8	FSM	ENSG00000061794.13	ENST00000081029.8	1829	8	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_5	43.54261342264	2153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTAATAGACTTATTT	11	True	NA	NA	False	AATAAA	-17	NA	27710831	27756295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180
transcript_30973.known	chr12	+	1715	7	FSM	ENSG00000061794.13	ENST00000538315.5	1715	7	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_5	203.100139504301	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCTAATAGACTTATT	14	True	NA	NA	False	AATAAA	-16	NA	27710834	27756294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27737538_27737609_27755180
transcript_30975.known	chr12	+	3278	3	FSM	ENSG00000087448.11	ENST00000649445.1	3278	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	31.5	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTCCAAAAAAAAAAAAAGA	21	True	NA	NA	False	NA	NA	NA	27780286	27800703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27780382_27791707_27791902_27797714
transcript_30981.known	chr12	+	2738	16	FSM	ENSG00000123106.11	ENST00000545336.5	2738	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	47.4252628411858	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	-11	True	NA	16	True	AATAAA	-18	NA	28190445	28550166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28190642_28225794_28225862_28226139_28226200_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_31.known	ERCC-00073	+	587	1	FSM	ERCC-00073A	DQ668358	587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00073_+_0_600
transcript_31002.nic	chr12	+	2568	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-49	0	-20	0	multi-exon	FALSE	canonical	3	64	junction_1	24.6570927366189	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	NA	False	NA	16	True	AATAAA	-18	NA	28190406	28550166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_3101.nic	chr1	-	884	6	ISM	ENSG00000134644.16	ENST00000440538.6	3936	22	-45	62338	-3	0	5prime_fragment	FALSE	canonical	3	397	junction_3	75.7612037919145	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAACAAGGGTAC	269	False	NA	1	True	TTTAAA	-43	NA	31065729	30995181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_31013.known	chr12	+	2440	12	FSM	ENSG00000123106.11	ENST00000539107.5	2440	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	40.1208916951409	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	1	True	NA	16	True	AATAAA	-18	NA	28190426	28550166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_3102.known	chr1	-	4242	22	FSM	ENSG00000134644.16	ENST00000373741.8	4242	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	136.375748105012	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTTTAAAAAAAAAAGAAA	7	False	NA	-1	True	NA	NA	NA	31065991	30932849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065688
transcript_31025.known	chr12	+	1301	11	ISM	ENSG00000123106.11	ENST00000536442.6	2519	13	-18	97530	-6	-4	5prime_fragment	FALSE	canonical	3	64	junction_1	25.8203408188196	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAATAAGTCAGGT	-19	True	NA	NA	False	AAAAAG	-33	NA	28190437	28452636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_3104.nic	chr1	-	593	4	NIC	ENSG00000134644.16	novel	906	7	NA	NA	-3	-3	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	262.755061268517	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTGAAAAGAAGAACAAGGG	269	False	NA	-2	True	TTTAAA	-40	NA	31065729	30995184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_30995221_31028795_31028865_31059203_31059578_31065615
transcript_31062.known	chr12	+	2334	12	FSM	ENSG00000123106.11	ENST00000381259.5	2334	12	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	17.2113742902383	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGTTACTTTTTGT	2	True	NA	15	True	AATAAA	-17	NA	28257199	28550165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_31063.known	chr12	+	665	4	FSM	ENSG00000123106.11	ENST00000544649.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	42.7109145561439	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGGCGATTGAACTTAAG	-13	True	NA	33	True	AAAAAG	-45	NA	28190443	28307749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28190642_28305648_28305807_28306741_28306946_28307644
transcript_31066.nic	chr12	+	2249	13	FSM	ENSG00000064763.12	ENST00000547759.2	3698	13	-48	1497	5	0	multi-exon	FALSE	canonical	0	0	junction_12	57.1909569386241	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCTATATTTAGTTTT	52	False	NA	14	True	ATTAAA	-16	NA	29149086	29334072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29332844_29332909_29333631
transcript_31067.nic	chr12	+	2170	13	FSM	ENSG00000064763.12	ENST00000686419.1	2115	13	-46	-9	5	9	multi-exon	FALSE	canonical	3	7	junction_12	43.2473505932252	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTCCTTCAATCGGG	52	False	NA	NA	False	ATTAAA	-27	NA	29149086	29341130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631_29333735_29340807
transcript_31069.known	chr12	+	3538	12	FSM	ENSG00000064763.12	ENST00000536681.8	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_6	19.7488361410393	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTCTTCTAGTGTTGT	11	True	NA	9	True	AATAAA	-18	NA	29149277	29335616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631
transcript_31077.known	chr12	+	871	2	FSM	ENSG00000064763.12	ENST00000549080.1	871	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGGAAGTGAGGAGCGC	16	False	NA	NA	False	NA	NA	NA	29149209	29172050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29171377
transcript_31078.known	chr12	+	567	2	FSM	ENSG00000064763.12	ENST00000550541.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTACTTGCTTTGAATAG	15	False	NA	NA	False	AGTAAA	-23	NA	29149319	29151874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29151395
transcript_3109.known	chr1	-	3936	22	FSM	ENSG00000134644.16	ENST00000440538.6	3936	22	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_10	125.154181556182	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	15	True	NA	5	True	AAAAAG	-5	NA	31065684	30932843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966198_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980167_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_31090.known	chr12	-	4228	20	FSM	ENSG00000133687.16	ENST00000551659.5	4228	20	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_13	16.10921864051	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATACACACTCTTCTTTTTT	861	False	NA	NA	False	TATAAA	-15	NA	29783897	29505598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29659879_29659984_29660803_29660886_29751665_29751873_29755708_29755886_29758703_29758778_29767897_29768076_29783449
transcript_31092.known	chr12	-	3254	14	FSM	ENSG00000133687.16	ENST00000319685.12	3254	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	32.3775800872717	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGTCCTACTTTATTA	NA	False	NA	-2	True	ATTAAA	-14	NA	29641238	29505981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_29506987_29512042_29512121_29514481_29514605_29516348_29516487_29517426_29517572_29518471_29518608_29520617_29520721_29536208_29536318_29556856_29557001_29572104_29572219_29583406_29583575_29604177_29604300_29633146_29633337_29640559
transcript_31095.nnic	chr12	+	1565	2	NIC	ENSG00000257262.1	novel	571	3	NA	NA	-70	1055	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTATAGAATGATTATAA	NA	False	NA	-8	True	AATAAA	-4	NA	30200912	30218971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_30201109_30217602
transcript_31096.known	chr12	-	5208	25	FSM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_13	25.7859444379211	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	11	True	NA	-11	True	AATAAA	-21	NA	30695869	30628987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_31098.nic	chr12	-	1455	11	ISM	ENSG00000133704.10	ENST00000256079.9	5208	25	-15	37190	-15	3090	5prime_fragment	FALSE	canonical	3	202	junction_8	24.0725985302792	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTATTTCATTTTTCTTT	-4	True	NA	NA	False	AAGAAA	-7	NA	30695884	30666177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_3110.known	chr1	-	906	7	FSM	ENSG00000134644.16	ENST00000480602.1	906	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	232.417309070464	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAACAAGGGTAC	16	True	NA	1	True	TTTAAA	-43	NA	31065683	30995181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31055312_31055381_31059203_31059578_31065615
transcript_3111.known	chr1	-	561	3	FSM	ENSG00000134644.16	ENST00000524516.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_1	12	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGAAGGTTGGAGTTGT	4	True	NA	NA	False	NA	NA	NA	31065695	31028757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31028865_31059203_31059578_31065615
transcript_31110.known	chr12	+	1039	5	FSM	ENSG00000285517.1	ENST00000649390.1	1039	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.96865172858795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTGAAATAGTA	103	False	NA	NA	False	AATATA	-14	NA	30796190	30802308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_30796217_30796982_30797211_30799912_30800022_30800533_30800602_30801700
transcript_31112.known	chr12	+	1402	5	FSM	ENSG00000285517.1	ENST00000648367.1	1402	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.71036092035419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTGTTCCAGTGAAATAT	10	True	NA	-13	True	NA	NA	NA	30795720	30802795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_30795846_30798310_30798316_30799912_30800022_30800533_30800602_30801700
transcript_31113.known	chr12	+	16489	5	FSM	ENSG00000285517.1	ENST00000648050.1	16489	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	1.78535710713571	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGCATGCCTAATCTT	69	False	NA	NA	False	AATAAA	-25	NA	30795810	30817435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_30796217_30798144_30798316_30799912_30800022_30800533_30800602_30801700
transcript_31116.known	chr12	+	2391	4	FSM	ENSG00000285517.1	ENST00000650193.1	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.16024689946929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAATTCCCACTTTACC	29	False	NA	NA	False	TTTAAA	-27	NA	30795457	30803155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_30796217_30799912_30800022_30800533_30800602_30801700
transcript_3112.nnic	chr1	+	197	2	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	85	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCACTGTTTTGGAC	NA	False	NA	1	True	AATAAA	-7	NA	31155051	31155820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr1_+_31155153_31155724
transcript_31131.known	chr12	-	2031	3	FSM	ENSG00000245614.5	ENST00000500527.1	2031	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTTTATAGTTTG	NA	False	NA	-1	True	AATAAA	-23	NA	31073847	31020762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31022030_31060659_31060771_31073194
transcript_31132.nnic	chr12	-	1690	3	FSM	ENSG00000245614.5	ENST00000685910.1	1384	3	-313	7	-259	-6	multi-exon	FALSE	canonical	0	0	junction_1	9	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTATTTGATTGTTTAT	NA	False	NA	-7	True	AATAAA	-17	NA	31074106	31020768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31021436_31060659_31060771_31073194
transcript_31134.nnic	chr12	-	1165	3	NNC	ENSG00000245614.5	novel	810	2	NA	NA	-259	4375	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGAAGCTTTATT	NA	False	NA	NA	False	ATTAAA	-19	NA	31074106	31056203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31056346_31060659_31060771_31073194
transcript_31135.known	chr12	-	3188	2	FSM	ENSG00000245614.5	ENST00000669174.1	3188	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATATAAATTGAATTACAT	1	True	NA	NA	False	AAAACA	-45	NA	31073786	31019433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31022030_31073194
transcript_31136.known	chr12	-	494	2	FSM	ENSG00000245614.5	ENST00000618041.2	810	2	305	11	279	-11	multi-exon	FALSE	canonical	3	18	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGGCCACCTATCTTC	280	False	NA	NA	False	ATTAAA	-13	NA	31073507	31060589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31060771_31073194
transcript_31138.known	chr12	+	3920	27	FSM	ENSG00000013573.17	ENST00000542838.6	3920	27	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	61.0150820427736	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	-15	True	NA	23	True	AATAAA	-24	NA	31073859	31104799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_31139.known	chr12	+	3751	27	FSM	ENSG00000013573.17	ENST00000545668.5	3751	27	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	94.1489519215641	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	19	True	NA	15	True	AATAAA	-16	NA	31073893	31104791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31073970_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103321_31103396_31103576_31103732_31103806
transcript_3115.known	chr1	-	1615	10	FSM	ENSG00000060688.13	ENST00000263694.9	1615	10	0	0	0	0	multi-exon	FALSE	canonical	3	1430	junction_2	130.173768004707	1834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCTCACTTGTTTTT	-12	True	NA	-1	True	AATACA	-19	NA	31296788	31259567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157_31269241_31271378_31271500_31281373_31281497_31289253_31289420_31291912_31292007_31293218_31293349_31296610
transcript_31153.nnic	chr12	+	1293	6	NNC	ENSG00000013573.17	novel	1718	7	NA	NA	-24	1340	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	133.412143375331	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGATGCTGCCTCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	31073835	31086408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31086013
transcript_31154.nnic	chr12	+	1168	6	NNC	ENSG00000013573.17	novel	3751	27	NA	NA	-21	1340	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	157.92023302921	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAGATGCTGCCTCGTT	2	False	NA	NA	False	AATAAA	-17	NA	31073838	31086408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_31073970_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31086013
transcript_31156.known	chr12	+	879	5	FSM	ENSG00000013573.17	ENST00000535317.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	145.348503604268	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGCGCCTGGTGAGCC	-4	True	NA	NA	False	NA	NA	NA	31074263	31084656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31074328_31077944_31078289_31078389_31078538_31083812_31084062_31084582
transcript_31157.nic	chr12	+	1323	4	ISM	ENSG00000013573.17	ENST00000535158.5	1718	7	-662	5227	-620	0	5prime_fragment	FALSE	canonical	3	179	junction_1	74.5519952784632	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGCGCCTGGTGAGCC	NA	False	NA	NA	False	NA	NA	NA	31073239	31084656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582
transcript_31160.known	chr12	+	3717	27	FSM	ENSG00000013573.17	ENST00000228264.10	3717	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	82.9570449194952	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGAGTTTTTTATTGA	-15	True	NA	15	True	AATAAA	-16	NA	31073859	31104791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31073970_31078462_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_31167.nnic	chr12	-	1072	7	NNC	ENSG00000177359.21	novel	781	7	NA	NA	-258	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.1612007164508	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31119374	31111656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118892
transcript_31168.nic	chr12	-	745	7	FSM	ENSG00000177359.21	ENST00000688821.1	750	7	-1	6	-1	0	multi-exon	FALSE	canonical	2	4	junction_6	8.91471941354422	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	75	False	NA	-4	True	ATTAAA	-16	NA	31119117	31111656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118962
transcript_31170.nnic	chr12	-	842	7	NNC	ENSG00000177359.21	novel	781	7	NA	NA	-2274	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	10.1612007164508	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31121390	31111656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31121138
transcript_31173.nnic	chr12	-	740	6	NIC	ENSG00000177359.21	novel	781	7	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	10.507140429251	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	-7	True	NA	-4	True	ATTAAA	-16	NA	31119107	31111656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31118896
transcript_31174.nnic	chr12	-	777	6	NNC	ENSG00000177359.21	novel	781	7	NA	NA	-2270	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	9.83056458195561	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31121386	31111656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31121138
transcript_31181.known	chr12	-	1215	7	FSM	ENSG00000177359.21	ENST00000391394.4	1215	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.6856987619721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGAGTCTATGACTTTT	-10	True	NA	-6	True	ATTAAA	-14	NA	31119110	31111658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31112289_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118962
transcript_31182.known	chr12	-	606	1	FSM	ENSG00000243517.1	ENST00000495623.1	606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCCAATAAAGACTGTT	NA	False	NA	NA	False	AATACA	-33	NA	31252597	31251991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31252000_31252600
transcript_31186.known	chr12	-	1555	6	FSM	ENSG00000139146.14	ENST00000454658.6	1555	6	0	0	0	0	multi-exon	TRUE	canonical	3	136	junction_5	1168.61473548813	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCCTCATGATAATAAA	-5	True	NA	-55	True	NA	NA	NA	31324162	31282061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31323943
transcript_31194.known	chr12	-	738	5	FSM	ENSG00000139146.14	ENST00000542983.1	738	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1260.67370381872	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAATATCTGA	-9	True	NA	NA	False	NA	NA	NA	31326199	31282687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31326023
transcript_31196.known	chr12	-	2532	3	FSM	ENSG00000139146.14	ENST00000539409.5	2532	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1425	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	9	True	NA	-34	True	AATAAA	-24	NA	31326116	31280583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31282872_31287633_31287785_31326023
transcript_31198.known	chr12	-	474	1	FSM	ENSG00000275097.1	ENST00000622889.1	474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCACAATTATTAATCTA	6872	False	NA	0	True	AATAAA	-16	NA	31280895	31280421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31280400_31280900
transcript_31199.known	chr12	-	2941	6	FSM	ENSG00000139146.14	ENST00000337682.9	2941	6	0	0	0	0	multi-exon	FALSE	canonical	3	2685	junction_5	221.244118565895	2839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	0	True	NA	-34	True	AATAAA	-24	NA	31326150	31280583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
transcript_31200.known	chr12	-	868	2	FSM	ENSG00000256232.1	ENST00000541749.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	1062	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTATACCTTAAGCTAAT	445	False	NA	-7	True	AATAAA	-17	NA	31369301	31363480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31363796_31368748
transcript_31201.known	chr12	-	9506	21	FSM	ENSG00000170456.16	ENST00000389082.10	9506	21	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	22.9410113116227	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTTGCTTCATTGTT	1	True	NA	-14	True	AATAAA	-16	NA	31591136	31382225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31387787_31389323_31389499_31392266_31392394_31392613_31392697_31398174_31398363_31399653_31399773_31402497_31402644_31409262_31409385_31413435_31413565_31415366_31415449_31423596_31423676_31424534_31424688_31426292_31426425_31433154_31433249_31442774_31442926_31447537_31447770_31451939_31452477_31460193_31460382_31479588_31480256_31495809_31495920_31590705
transcript_31203.nnic	chr12	-	390	2	NNC	ENSG00000170456.16	novel	9506	21	NA	NA	40233	4483	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATATGGATGTGGC	9423	False	NA	NA	False	ATTAAA	-20	NA	31386518	31377742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31377975_31386360
transcript_31204.known	chr12	-	1025	9	FSM	ENSG00000151743.11	ENST00000536761.5	1025	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	54.799635035281	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGCTTATCAAAACTAC	1	True	NA	NA	False	NA	NA	NA	31729021	31672277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_31214.known	chr12	-	1952	7	FSM	ENSG00000151743.11	ENST00000281471.11	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	25.8886504519301	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATCACATTTTCCCCTT	1	True	NA	-5	True	AATAAA	-25	NA	31729021	31671141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31728970
transcript_31228.known	chr12	-	560	5	FSM	ENSG00000151743.11	ENST00000509386.2	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCCTGAGTAGTTGGG	3	True	NA	NA	False	NA	NA	NA	31729100	31709079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31709168_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_31229.known	chr12	+	2055	4	FSM	ENSG00000139160.13	ENST00000395763.7	2055	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGATGCTTGTT	7008	False	NA	NA	False	TTTAAA	-40	NA	31659186	31668967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31659363_31661840_31662268_31666086_31666218_31667646
transcript_31235.known	chr12	-	430	3	FSM	ENSG00000151743.11	ENST00000422146.6	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	33.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATCCGCCTCAGCCTC	7	True	NA	NA	False	NA	NA	NA	31729057	31708957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31709168_31709292_31709426_31728970
transcript_31236.known	chr12	+	2088	1	FSM	ENSG00000276900.1	ENST00000619086.1	2088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTTTATGTAATTT	NA	False	NA	20	True	AATAAA	-21	NA	31729116	31731204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31729100_31731200
transcript_31237.known	chr12	-	880	6	FSM	ENSG00000151743.11	ENST00000541931.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	41.0268204958659	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTAGCTAAGTCTTG	-7	True	NA	-76	True	NA	NA	NA	31729110	31672169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31728970
transcript_31239.known	chr12	+	965	5	FSM	ENSG00000174718.12	ENST00000535596.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	97.8749201787669	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGATGTGAATGTCAA	22	False	NA	-33	True	NA	NA	NA	31959437	31992941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31987238_31987323_31992377
transcript_31241.nic	chr12	+	761	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-240	12049	-195	-2	5prime_fragment	FALSE	canonical	3	130	junction_1	12.675435561221	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTCAGAGTTCTTTCAGC	-6	True	NA	3	True	AATAAA	-15	NA	31959174	31981058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_31242.nnic	chr12	+	1102	4	NIC	ENSG00000174718.12	novel	6234	6	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_3	57.7369513877859	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	146	False	NA	9	True	AATAAA	-23	NA	31959382	31993107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_31959492_31960776_31960872_31970188_31970357_31992377
transcript_31244.known	chr12	+	814	4	FSM	ENSG00000174718.12	ENST00000397578.7	814	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	112.775095753549	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTGTTTTATAACTAA	-3	True	NA	-5	True	AATATA	-3	NA	31959448	31992969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31987238_31987323_31992377
transcript_31246.known	chr12	+	362	3	FSM	ENSG00000174718.12	ENST00000540924.5	362	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	48	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAGTTCTTTCAGCTA	-8	True	NA	5	True	AATAAA	-17	NA	31959407	31981060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31980877
transcript_31248.known	chr12	+	674	3	FSM	ENSG00000174718.12	ENST00000541981.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	61	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGGGAGGACCGTTCCT	133	False	NA	NA	False	TTTAAA	-39	NA	31959369	31992834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31992377
transcript_3125.known	chr1	+	1568	8	FSM	ENSG00000121766.16	ENST00000344147.10	1568	8	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	57.2224445761041	4231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	14	True	NA	32	True	ACTAAA	-23	NA	31297031	31364936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_31250.nic	chr12	+	1572	2	ISM	ENSG00000174718.12	ENST00000540924.5	362	3	-31	18827	7	-8013	5prime_fragment	FALSE	canonical	3	130	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCATTTGTGAAGGTG	140	False	NA	NA	False	TTTAAA	-11	NA	31959376	31962233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_31959492_31960776
transcript_31251.known	chr12	+	6234	6	FSM	ENSG00000174718.12	ENST00000312561.9	6234	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	55.9464029227975	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	-1	True	NA	9	True	AATAAA	-23	NA	31959414	31993107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
transcript_31252.known	chr12	+	883	2	FSM	ENSG00000174718.12	ENST00000543763.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTGAAACCTTCACAG	2476	False	NA	5	True	AATAAA	-19	NA	31987165	31993103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31987323_31992377
transcript_31258.known	chr12	+	766	2	FSM	ENSG00000151746.15	ENST00000547680.2	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGCTCTTCTGTTATC	423	False	NA	15	True	AATAAA	-22	NA	32328401	32333065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32328556_32332453
transcript_3126.known	chr1	+	1489	7	FSM	ENSG00000121766.16	ENST00000618216.4	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	236.603512700514	2360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31364031
transcript_31260.known	chr12	+	8465	17	FSM	ENSG00000139132.16	ENST00000534526.7	8465	17	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.3652062208139	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTTTACATGTTA	12	True	NA	20	True	AATAAA	-17	NA	32399557	32646050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32399960_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
transcript_31265.known	chr12	+	2931	17	FSM	ENSG00000139132.16	ENST00000583694.2	2931	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.9764611288988	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGGAGCATTTTTTGA	15	True	NA	NA	False	GATAAA	-17	NA	32502159	32640739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32502339_32564136_32564290_32576265_32576450_32581959_32582468_32598496_32598587_32601277_32601424_32602160_32602318_32607956_32608096_32610775_32610835_32611136_32611284_32619697_32619871_32624421_32624453_32624975_32625069_32625653_32625780_32633548_32633690_32638654_32638796_32640275
transcript_31268.known	chr12	+	1629	4	FSM	ENSG00000139132.16	ENST00000472289.5	1629	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.9753001686188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGCTTTTAATTTTTT	5	True	NA	NA	False	ATTAAA	-19	NA	32502042	32582955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32502339_32564136_32564290_32576265_32576450_32581959
transcript_3127.known	chr1	+	1705	9	FSM	ENSG00000121766.16	ENST00000546109.5	1705	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	250.72145899384	2599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_31271.known	chr12	+	4514	20	FSM	ENSG00000087470.19	ENST00000549701.6	4514	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_14	66.5023691078213	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAAAATTTTACGACTT	1	True	NA	NA	False	NA	NA	NA	32679300	32745650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_31273.known	chr12	+	2393	19	FSM	ENSG00000087470.19	ENST00000547312.5	2393	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	96.6620688561731	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATCCAAATAATAAATGG	20	True	NA	-23	True	TATAAA	-40	NA	32679319	32743581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_31274.known	chr12	+	4439	19	FSM	ENSG00000087470.19	ENST00000452533.6	4439	19	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_14	55.4817287241685	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCAAAAAATGAATTC	NA	False	NA	NA	False	AATAAA	-26	NA	32679199	32745552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_31276.known	chr12	+	3101	18	FSM	ENSG00000087470.19	ENST00000266481.10	3101	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	91.1636423613126	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCATAGCTTCATACCA	3	True	NA	NA	False	NA	NA	NA	32679302	32744350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_3128.known	chr1	+	1534	7	FSM	ENSG00000121766.16	ENST00000616393.4	1534	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	236.031600991619	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_31283.nic	chr12	+	345	2	ISM	ENSG00000087470.19	ENST00000550011.5	576	3	-62	4555	-38	-4555	5prime_fragment	FALSE	canonical	3	400	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAGAAGAAAATGGTAAA	-2	True	NA	NA	False	GATAAA	-11	NA	32679253	32701547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_32679466_32701414
transcript_31284.known	chr12	-	2117	5	FSM	ENSG00000139131.13	ENST00000324868.13	2117	5	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_4	8.1967981553775	1166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-7	True	NA	NA	False	NA	NA	NA	32755897	32746543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_32747364_32749936_32750108_32750718_32750875_32753917_32754086_32755095
transcript_31285.known	chr12	-	4229	13	FSM	ENSG00000057294.16	ENST00000340811.9	4229	13	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_8	21.0256126875982	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCAAAGTAGTGTTGC	12	True	NA	-12	True	AATAAA	-26	NA	32896777	32790754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
transcript_31287.known	chr12	-	1563	2	FSM	ENSG00000057294.16	ENST00000546741.2	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAATTCCAGGAAGAAA	188	False	NA	NA	False	NA	NA	NA	32896601	32893308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_32894779_32896508
transcript_31289.known	chr12	+	316	1	FSM	ENSG00000244743.1	ENST00000462203.1	316	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAACTAATGAAACAATAAT	NA	False	NA	NA	False	NA	NA	NA	32863117	32863433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32863100_32863400
transcript_3129.known	chr1	+	1458	7	FSM	ENSG00000121766.16	ENST00000616859.4	1458	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	287.685978494299	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	0	True	NA	49	True	ACTAAA	-40	NA	31296981	31364953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31364031
transcript_31290.nic	chr12	-	855	2	ISM	ENSG00000110975.8	ENST00000539102.1	2433	9	-385	50028	-212	-18503	5prime_fragment	FALSE	canonical	3	20	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGGAAAATGAAAAGCCA	NA	False	NA	NA	False	AAAAAG	-4	NA	33440031	33426300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_33426496_33439371
transcript_31292.known	chr12	+	2913	3	FSM	ENSG00000139133.7	ENST00000266483.7	2913	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACATATTTTGTGAT	12	True	NA	9	True	AATAAA	-24	NA	34022495	34028302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_34022771_34023961_34024160_34025862
transcript_31295.known	chr12	+	1637	3	FSM	ENSG00000139133.7	ENST00000541875.1	1637	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTAGTTTTTTTTA	-11	True	NA	NA	False	AAAACA	-34	NA	34022472	34027029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_34022745_34023961_34024160_34025862
transcript_31298.known	chr12	+	10050	3	FSM	ENSG00000175548.9	ENST00000308742.9	10050	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAATGTGTTGTGTCT	-1	True	NA	NA	False	AATAAA	-17	NA	38316773	38329721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_38317065_38318260_38318459_38320160
transcript_31299.known	chr12	+	571	3	FSM	ENSG00000175548.9	ENST00000551464.1	571	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAAAGAAGACTGCTCT	-13	True	NA	NA	False	NA	NA	NA	38316761	38323982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_38317065_38318260_38318459_38323912
transcript_3130.known	chr1	+	1730	8	FSM	ENSG00000121766.16	ENST00000373714.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	209.442408430049	2693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	-10	True	NA	32	True	ACTAAA	-23	NA	31297007	31364936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297214_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_31301.known	chr12	+	1565	3	FSM	ENSG00000175548.9	ENST00000548240.1	1565	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACATTAGTTTTTTTAA	64	False	NA	NA	False	AAAACA	-34	NA	38316838	38321327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_38317039_38318260_38318459_38320160
transcript_31302.nic	chr12	-	1210	12	ISM	ENSG00000139117.14	ENST00000331366.10	3431	20	-334	72676	-334	1480	5prime_fragment	FALSE	canonical	3	11	junction_4	3.62953905048675	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAAAAGAAAAAATATAC	17	True	NA	NA	False	AAAAAG	-4	NA	38905925	38724878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_31304.nic	chr12	-	1189	11	ISM	ENSG00000139117.14	ENST00000331366.10	3431	20	-334	78080	-334	-3924	5prime_fragment	FALSE	canonical	3	11	junction_3	3.66606055596467	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGCATTTTATTTTA	17	True	NA	NA	False	NA	NA	NA	38905925	38730282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_31308.known	chr12	-	3431	20	FSM	ENSG00000139117.14	ENST00000331366.10	3431	20	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	3.35936282047009	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTTGTCAAACATC	0	True	NA	-13	True	AATAAA	-15	NA	38905591	38652202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_38654071_38670728_38670803_38675716_38675775_38677451_38677555_38685489_38685618_38693656_38693839_38702874_38702922_38723771_38723834_38724845_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_31309.nnic	chr12	+	371	2	NNC	ENSG00000257718.1	novel	526	2	NA	NA	-782	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGCTTGCAGTAATTTGT	NA	False	NA	25	True	AATAAA	-20	NA	38905668	38909592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_38905757_38909309
transcript_3131.known	chr1	+	1900	10	FSM	ENSG00000168528.12	ENST00000373709.8	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	23.5738922340315	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTGCCCCTCACCCT	-7	True	NA	28	True	AATAAA	-20	NA	31413212	31434678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31413305_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
transcript_31310.known	chr12	+	526	2	FSM	ENSG00000257718.1	ENST00000551152.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGCTTGCAGTAATTTGT	NA	False	NA	25	True	AATAAA	-20	NA	38906450	38909592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_38906694_38909309
transcript_31311.known	chr12	-	967	3	FSM	ENSG00000258144.2	ENST00000662938.1	967	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTCCTGATTTGCTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	39145471	39087346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_39087993_39092465_39092683_39145367
transcript_31313.known	chr12	-	7221	10	FSM	ENSG00000151229.13	ENST00000280871.9	7221	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	8.62525719781127	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTTCCCTTGCACTTAT	-14	True	NA	-4	True	AATAAA	-23	NA	40106081	39755024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_39760253_39764459_39764613_39764736_39764859_39830102_39830229_39864761_39864883_39871797_39871962_39951256_39951366_40028300_40028510_40048050_40048211_40105252
transcript_31318.known	chr12	-	7492	8	FSM	ENSG00000151233.11	ENST00000398675.8	7492	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	31.6305200070813	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTCTGGATTATTTT	12	True	NA	NA	False	AATAAA	-33	NA	42144874	42081844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42129758_42129852_42144425
transcript_31320.known	chr12	-	545	6	FSM	ENSG00000015153.15	ENST00000552928.5	545	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.1580884716218	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAAGATAAAGTAGA	12	True	NA	NA	False	AAGAAA	-1	NA	42238223	42161689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42161766_42210354_42210455_42210547_42210681_42212443_42212485_42237598_42237725_42238154
transcript_31324.known	chr12	-	4096	4	FSM	ENSG00000015153.15	ENST00000534854.7	4096	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	3.39934634239519	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATTC	-13	True	NA	NA	False	AATAAA	-18	NA	42238248	42157103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42160827_42161612_42161766_42237598_42237725_42238154
transcript_31329.nic	chr12	-	407	3	ISM	ENSG00000015153.15	ENST00000534854.7	4096	4	-120	4595	-19	0	5prime_fragment	FALSE	canonical	3	41	junction_1	3	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAGAAAGAGAAAAAAGA	-18	True	NA	NA	False	NA	NA	NA	42238368	42161698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_42161766_42237598_42237725_42238154
transcript_31330.known	chr12	-	269	2	FSM	ENSG00000015153.15	ENST00000548917.1	269	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAGAAAGAGAAAAAAGA	550	False	NA	NA	False	NA	NA	NA	42237800	42161698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42161766_42237598
transcript_31339.known	chr12	+	1583	9	FSM	ENSG00000134283.18	ENST00000449194.6	1583	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	63.0114076973368	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	4	True	NA	37	True	AATAAA	-28	NA	42326167	42441963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_31340.known	chr12	+	1693	11	FSM	ENSG00000134283.18	ENST00000395580.7	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	165.454041957276	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	NA	False	NA	24	True	AATAAA	-15	NA	42326144	42441950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_31341.known	chr12	+	1095	10	FSM	ENSG00000134283.18	ENST00000552761.5	1095	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	175.275515040862	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAAAAATTTTTTTTC	7	True	NA	50	True	AAAACA	-1	NA	42326170	42441543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_31342.known	chr12	+	3377	12	FSM	ENSG00000134283.18	ENST00000432191.6	3377	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_10	169.930710235059	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	14	True	NA	13	True	AATAAA	-15	NA	42326177	42448618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
transcript_31343.known	chr12	+	1359	10	FSM	ENSG00000134283.18	ENST00000317560.13	1359	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	186.380137234512	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATTTTCACAACTTTC	10	True	NA	NA	False	AAGAAA	-8	NA	42326173	42459715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42459277
transcript_31346.known	chr12	-	1710	8	FSM	ENSG00000139168.9	ENST00000679269.1	1710	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	193.776643987613	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGAAATTTCATTAT	NA	False	NA	NA	False	ATTAAA	-3	NA	42326257	42312101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42326168
transcript_31348.known	chr12	-	1661	7	FSM	ENSG00000139168.9	ENST00000676501.1	1661	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	206.241565484102	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAGAAATAAGTTAATAC	-15	True	NA	NA	False	AGTAAA	-3	NA	42326118	42312170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42325923
transcript_31349.known	chr12	-	1639	6	FSM	ENSG00000139168.9	ENST00000679184.1	1639	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	213.954574618072	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAATATTATTATTGTC	2	True	NA	NA	False	AGTAAA	-27	NA	42326101	42312146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42325923
transcript_3135.known	chr1	+	680	2	FSM	ENSG00000142910.16	ENST00000466998.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGTGAGGGTCATCTTA	4	True	NA	NA	False	NA	NA	NA	31576544	31577762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31576596_31577133
transcript_31352.known	chr12	-	1808	8	FSM	ENSG00000139168.9	ENST00000266529.8	1808	8	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_3	36.5155823601657	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAATCTTGTGTTTCC	9	True	NA	NA	False	ATTAAA	-19	NA	42326094	42312085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_31353.known	chr12	-	1199	8	FSM	ENSG00000139168.9	ENST00000552235.2	1199	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	194.961429989815	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTTTAAATATGG	NA	False	NA	-16	True	AATAAA	-12	NA	42326147	42312780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313232_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_31354.known	chr12	-	907	8	FSM	ENSG00000139168.9	ENST00000552673.5	907	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	197.623637353471	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTATTTGAAAAGTTC	16	True	NA	27	True	AAAAAG	-9	NA	42326087	42312930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324067_42324105_42325923
transcript_31355.known	chr12	-	3778	9	FSM	ENSG00000139174.12	ENST00000640055.1	3778	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	48.7338114146636	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAATATATGGTAAAAACA	17	False	NA	NA	False	TATAAA	-33	NA	42484298	42458824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472562_42483757_42483986_42484273
transcript_31359.known	chr12	-	5761	8	FSM	ENSG00000139174.12	ENST00000639589.1	5761	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	33.8990096779074	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCGACTTAGTCTATTCTC	NA	False	NA	-9	True	AATAAA	-10	NA	42484444	42456762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42484273
transcript_31362.nnic	chr12	+	579	4	Antisense	novelGene_ENSG00000139174.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGATGCTCAATTCAAAAT	NA	False	NA	NA	False	ATTAAA	-19	NA	42565143	42587894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_42565281_42565749_42565896_42584877_42584942_42587662
transcript_31364.nnic	chr12	+	610	3	Antisense	novelGene_ENSG00000139174.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAAACTCTGAATCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	42565143	42566655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_42565281_42565749_42565896_42566328
transcript_31367.nnic	chr12	+	2199	2	Antisense	novelGene_ENSG00000139174.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGGTATAAGCGTTAT	NA	False	NA	NA	False	NA	NA	NA	42565143	42567811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_42565281_42565749
transcript_31369.known	chr12	-	3311	8	FSM	ENSG00000139174.12	ENST00000552240.6	3311	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_7	20.7256126666539	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTACAGATTGAAAAAAAA	320	False	42484008	NA	False	NA	NA	NA	42483995	42459279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42460666_42464394_42465259_42466193_42466381_42468625_42468830_42469449_42469588_42470245_42470360_42472384_42472565_42483757
transcript_31371.nnic	chr12	-	1042	3	NNC	ENSG00000241251.2	novel	478	2	NA	NA	-100144	18	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCGGACTGTAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	43661441	43560765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_43560801_43560836_43561330_43660927
transcript_31372.nnic	chr12	-	1025	3	NNC	ENSG00000241251.2	novel	478	2	NA	NA	-100137	18	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCGGACTGTAAAAATGT	NA	False	NA	NA	False	NA	NA	NA	43661434	43560765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_43560801_43560836_43561330_43660937
transcript_31378.known	chr12	-	4364	9	FSM	ENSG00000129317.15	ENST00000416848.6	4364	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	13.683361246419	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATATTGTAGTACCATT	14	True	NA	-11	True	AATAAA	-20	NA	43758758	43728606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758285
transcript_31379.known	chr12	-	3313	9	FSM	ENSG00000129317.15	ENST00000551923.5	3313	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	14.1901153976985	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGAGAAGCTATATG	-1	True	NA	19	True	AATAAA	-9	NA	43758773	43729257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758700
transcript_31380.known	chr12	-	13567	9	FSM	ENSG00000129317.15	ENST00000344862.10	13567	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	10.1242283656583	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTTTGAGGAAACTAC	-18	True	NA	39	True	AATAAA	-15	NA	43758790	43718991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758729
transcript_31388.known	chr12	-	1149	4	FSM	ENSG00000129317.15	ENST00000553166.1	1149	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	12.4721912892465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAATGAATGT	5	True	NA	14	True	AAAAAG	-6	NA	43758767	43746213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43746239_43748449_43748610_43754335_43755262_43758729
transcript_31389.nic	chr12	-	1626	3	ISM	ENSG00000129317.15	ENST00000416848.6	4364	9	-67	19843	-32	-2236	5prime_fragment	FALSE	canonical	2	7	junction_2	13.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAGATATTAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	43758825	43748449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_43748610_43754335_43755262_43758285
transcript_31390.nic	chr12	-	1177	3	ISM	ENSG00000129317.15	ENST00000551923.5	3313	9	-18	19192	-1	-2236	5prime_fragment	FALSE	canonical	2	5	junction_2	14.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAGATATTAAGAAAT	-19	True	NA	NA	False	NA	NA	NA	43758791	43748449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_43748610_43754335_43755262_43758700
transcript_31391.nic	chr12	-	1182	3	ISM	ENSG00000129317.15	ENST00000553166.1	1149	4	-58	2236	-32	-2236	5prime_fragment	FALSE	canonical	3	24	junction_2	5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAGATATTAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	43758825	43748449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_43748610_43754335_43755262_43758729
transcript_31392.nic	chr12	-	1169	2	ISM	ENSG00000129317.15	ENST00000549868.1	784	3	4	-304	3	304	intron_retention	FALSE	canonical	2	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAATTTACCTTTAAAC	17	True	NA	NA	False	AAGAAA	-6	NA	43758755	43754562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_43755262_43758285
transcript_31396.known	chr12	+	4284	12	FSM	ENSG00000198001.15	ENST00000613694.5	4284	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	6.65812124494566	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGCTTTAATTTTT	-24	True	NA	6	True	ATTAAA	-16	NA	43758950	43789541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_43759017_43768102_43768273_43771219_43771366_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_31400.known	chr12	+	1348	11	FSM	ENSG00000198001.15	ENST00000550615.5	1348	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	6.21369455316239	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATCTCAACCATTTTT	-25	True	NA	NA	False	NA	NA	NA	43758949	43786750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_43759017_43768102_43768273_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_31402.known	chr12	+	1381	12	NNC	ENSG00000198001.15	novel	4284	12	NA	NA	-5683	-35	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	8.40798518528863	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTATTGGAAAAGACTC	9137	False	NA	NA	False	TTTAAA	-39	NA	43768111	43786715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_43768273_43771219_43771366_43772179_43772363_43772911_43773043_43773044_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_31404.known	chr12	-	3012	10	FSM	ENSG00000151239.14	ENST00000552521.5	3012	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	71.9255444930192	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	328	False	NA	-2	True	AATAAA	-17	NA	43806287	43793722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43805830_43805886_43806220
transcript_31405.known	chr12	-	2987	9	FSM	ENSG00000151239.14	ENST00000395510.7	2987	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	8.30662386291807	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	4	True	NA	-2	True	AATAAA	-17	NA	43806317	43793722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
transcript_31407.known	chr12	-	455	2	FSM	ENSG00000151239.14	ENST00000547961.1	455	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTTGTGAATTATTCAA	360	False	NA	NA	False	ACTAAA	-27	NA	43806255	43804152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43804573_43806220
transcript_31409.known	chr12	-	612	6	FSM	ENSG00000151239.14	ENST00000550371.1	612	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	78.0958385575057	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATTAAAATCAATGAGG	-7	True	NA	NA	False	NA	NA	NA	43806328	43799416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43799503_43800434_43800531_43802285_43802465_43804175_43804241_43804494_43804573_43806220
transcript_31410.known	chr12	-	3196	21	FSM	ENSG00000184613.11	ENST00000452445.6	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	36.7843376996243	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACATGTGAGTCTGAG	845	False	44876373	-12	True	AATAAA	-16	NA	44876355	44508281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814_44875901_44876293
transcript_31411.known	chr12	-	3203	20	FSM	ENSG00000184613.11	ENST00000395487.6	3203	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_19	38.7413469920575	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTCTGAGTATCTTG	-2	True	NA	-5	True	AATAAA	-23	NA	44875654	44508274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875506
transcript_31419.known	chr12	-	559	3	FSM	ENSG00000184613.11	ENST00000548826.5	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTCTCTTGTATATC	1184	False	NA	NA	False	ATTAAA	-16	NA	44876016	44815908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_44816137_44875224_44875354_44875814
transcript_31420.known	chr12	-	2806	4	FSM	ENSG00000185610.6	ENST00000332700.6	2806	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGTATGGTTTCTATT	-2	True	NA	NA	False	TTTAAA	-17	NA	45051099	45014671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45016619_45023706_45023895_45036018_45036115_45050524
transcript_31422.nic	chr12	-	2086	4	FSM	ENSG00000134297.7	ENST00000691674.1	2044	4	-59	17	-38	-17	multi-exon	FALSE	canonical	0	0	junction_2	21.4165045389453	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	NA	False	NA	NA	False	AATAAA	-28	NA	45216085	45173063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45174643_45176240_45176434_45190793_45190962_45215939
transcript_31423.known	chr12	-	1839	3	FSM	ENSG00000134297.7	ENST00000256692.6	1874	3	18	17	18	-17	multi-exon	FALSE	canonical	3	14	junction_2	3	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	2	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45174643_45176240_45176434_45215939
transcript_31424.known	chr12	-	277	3	FSM	ENSG00000134297.7	ENST00000545609.3	876	3	-17	616	0	-393	multi-exon	FALSE	canonical	0	0	junction_1	26	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGGTGATCGGACCTA	NA	False	NA	NA	False	NA	NA	NA	45216041	45176426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45176434_45190793_45190962_45215939
transcript_31429.nic	chr12	+	1460	10	ISM	ENSG00000189079.17	ENST00000422737.6	5481	20	-225	56227	-15	-4543	5prime_fragment	FALSE	canonical	3	64	junction_6	15.0037032465692	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGAAAAGAGCATAGGTAA	-15	True	NA	NA	False	NA	NA	NA	45729690	45837691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_45729929_45730043_45730138_45731216_45731315_45811417_45811552_45817669_45817889_45821419_45821488_45836588_45836656_45836740_45836992_45837320_45837418_45837497
transcript_31434.nic	chr12	+	2486	4	ISM	ENSG00000189079.17	ENST00000422737.6	5481	20	-225	80445	-15	-28761	5prime_fragment	FALSE	canonical	3	80	junction_3	7.58653778449403	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCACCAAAATGAAATTATC	-15	True	NA	NA	False	NA	NA	NA	45729690	45813473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_45729929_45730043_45730138_45731216_45731315_45811417
transcript_31438.nic	chr12	-	3308	11	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-80	7585	-70	0	5prime_fragment	FALSE	canonical	3	228	junction_1	43.6605084716154	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAGAAAAGAAAAAAATGA	1403	False	NA	15	True	AATGAA	-4	NA	45990654	45926715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_31442.nic	chr12	-	809	7	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-80	15352	-70	-3533	5prime_fragment	FALSE	canonical	3	244	junction_3	47.0838495546922	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGGAAAGAAAAATGCAGC	1403	False	NA	NA	False	NA	NA	NA	45990654	45934482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_31451.known	chr12	-	1931	4	FSM	ENSG00000139218.18	ENST00000395454.6	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	163.813579684008	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGCACGGTGATACATG	1473	False	NA	NA	False	AAAAAG	-25	NA	45990584	45954733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45956193_45961699_45961858_45964106_45964189_45990352
transcript_31454.known	chr12	-	1336	4	FSM	ENSG00000139218.18	ENST00000395453.2	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	149.760549619124	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	-13	True	NA	-9	True	AATAAA	-20	NA	45990580	45960454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45961323_45961699_45961858_45964106_45964189_45990352
transcript_31457.known	chr12	-	7552	15	FSM	ENSG00000139218.18	ENST00000369367.8	7552	15	0	0	0	0	multi-exon	FALSE	canonical	2	107	junction_2	69.3641676595491	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACATTTTATTAT	-7	True	NA	30	True	AATAAA	-18	NA	45990574	45919130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45922195_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_31458.known	chr12	-	3271	11	FSM	ENSG00000139218.18	ENST00000547018.5	3271	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	116.77504014129	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAGAAAAGAAAAAAATGA	NA	False	NA	15	True	AATGAA	-4	NA	45992120	45926715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951753_45961695_45961858_45964106_45964189_45991884
transcript_3146.known	chr1	-	865	5	FSM	ENSG00000162517.13	ENST00000489164.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	125.982141591576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTACTGCCCACGCTCT	584	False	NA	NA	False	NA	NA	NA	31644589	31630788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644379
transcript_31462.known	chr12	-	3436	18	FSM	ENSG00000111371.16	ENST00000439706.5	3436	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	249.915224380514	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	23	True	NA	6	True	NA	NA	NA	46268997	46187800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46254813_46254937_46268525
transcript_31469.known	chr12	-	8097	17	FSM	ENSG00000111371.16	ENST00000398637.10	8097	17	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_16	128.819095537114	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATGTTGTGTTTGT	1005	False	46269065	-11	True	ATTAAA	-19	NA	46269043	46183062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268525
transcript_3147.known	chr1	-	1614	5	FSM	ENSG00000162517.13	ENST00000373703.5	1614	5	0	0	0	0	multi-exon	TRUE	canonical	3	241	junction_4	23.0366555732381	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGTTTTCCACCATG	2	True	NA	-20	True	AATAAA	-17	NA	31644876	31629865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644840
transcript_31470.known	chr12	-	2332	17	FSM	ENSG00000111371.16	ENST00000546893.5	2332	17	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_16	99.98999949995	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTTTAGAAGAGAAAAGA	-3	True	NA	NA	False	NA	NA	NA	46269119	46188564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268864
transcript_3151.known	chr1	-	750	4	FSM	ENSG00000162517.13	ENST00000478502.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	131.362940825113	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAGTGAGGACCGG	277	False	NA	NA	False	NA	NA	NA	31644896	31630448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31644840
transcript_31510.known	chr12	-	4795	16	FSM	ENSG00000134294.14	ENST00000256689.10	4795	16	0	0	0	0	multi-exon	TRUE	canonical	3	903	junction_13	74.507151036364	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCAGTGTTTTTTGTTTT	1	True	NA	-11	True	AATAAA	-18	NA	46372773	46358187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
transcript_31514.known	chr12	-	4384	15	FSM	ENSG00000134294.14	ENST00000549258.5	4384	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	270.201408250231	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGGTACAAATTCAGA	3	True	NA	-12	True	AATAAA	-22	NA	46372771	46358480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370775_46370858_46371177_46371380_46372508
transcript_31528.nnic	chr12	+	707	5	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	0	157374	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	14.8828760661372	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	207	False	NA	8	True	AATAAA	-18	NA	46383660	46652577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_46383714_46387746_46387973_46455011_46455142_46470152_46470263_46652389
transcript_3153.nnic	chr1	+	1487	3	NNC	ENSG00000235790.7	novel	829	4	NA	NA	-1534	-13915	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	4	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACTGTTATCCAGTCTAG	NA	False	NA	9	True	AATAAA	-18	NA	31642514	31645831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_31642624_31644038_31644297_31644711
transcript_31537.nnic	chr12	+	629	4	Fusion	ENSG00000257261.7_ENSG00000272369.1	novel	695	4	NA	NA	-18	27	multi-exon	FALSE	canonical	2	3	junction_1	14.1656862405839	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	NA	False	NA	8	True	AATAAA	-18	NA	46383414	46652577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_+_46383520_46387746_46387973_46470152_46470263_46652389
transcript_31543.nnic	chr12	+	597	4	Fusion	ENSG00000257261.7_ENSG00000272369.1	novel	829	4	NA	NA	0	27	multi-exon	FALSE	canonical	0	0	junction_3	15.8394724940223	74	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	207	False	NA	8	True	AATAAA	-18	NA	46383660	46652577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_+_46383714_46387746_46387973_46455011_46455142_46652389
transcript_31545.nnic	chr12	+	577	4	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	0	157374	combination_of_known_splicesites	FALSE	canonical	3	26	junction_3	4.78423336480244	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	207	False	NA	8	True	AATAAA	-18	NA	46383660	46652577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_46383714_46387746_46387973_46470152_46470263_46652389
transcript_31549.known	chr12	+	718	3	FSM	ENSG00000257261.7	ENST00000666942.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTAATAGAAATAAAACGT	-5	True	NA	NA	False	ATTAAA	-12	NA	46383672	46470603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_46383714_46387746_46387973_46470152
transcript_31550.nnic	chr12	-	4039	17	NIC	ENSG00000139209.16	novel	3983	17	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_15	17.3056168627414	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	NA	False	NA	-4	True	AATAAA	-18	NA	46832477	46764760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46803602_46803795_46832326
transcript_31551.nnic	chr12	-	3846	16	NIC	ENSG00000139209.16	novel	3791	16	NA	NA	-68	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_8	8.41321711488668	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	NA	False	NA	-4	True	AATAAA	-18	NA	46832476	46764760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46832326
transcript_31552.known	chr12	-	3791	16	FSM	ENSG00000139209.16	ENST00000447411.5	3791	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	15.100551866295	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-21	True	NA	-4	True	AATAAA	-18	NA	46825997	46764760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46825902
transcript_31554.known	chr12	-	3983	17	FSM	ENSG00000139209.16	ENST00000266579.9	3983	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	18.2174367022367	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-21	True	NA	-4	True	AATAAA	-18	NA	46825997	46764760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46803602_46803795_46825902
transcript_31558.known	chr12	+	476	3	FSM	ENSG00000179715.13	ENST00000551777.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTGGTGGACGGAGGC	1	True	NA	NA	False	NA	NA	NA	47223544	47235238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47223673_47223923_47224040_47235006
transcript_31559.known	chr12	+	732	2	FSM	ENSG00000179715.13	ENST00000549630.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGAAGTCACCGGGG	2138	False	NA	NA	False	NA	NA	NA	47223500	47235566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47223673_47235006
transcript_31566.known	chr12	-	4339	17	FSM	ENSG00000005175.10	ENST00000005386.8	4339	17	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_11	27.4214075814864	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCGTATACAACCTATTG	-14	True	NA	NA	False	AATAAA	-21	NA	47706030	47661248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_31570.known	chr12	-	2149	16	FSM	ENSG00000005175.10	ENST00000380650.4	2149	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	83.6116950883999	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACATTTGTAAGGATCAG	9009	False	NA	-15	True	AATAAA	-15	NA	47705986	47663292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_31576.nic	chr12	-	1170	4	Fusion	ENSG00000276390.1_ENSG00000005175.10	novel	420	3	NA	NA	-29	-2	multi-exon	FALSE	canonical	2	17	junction_1	180.544238961597	205	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACGTAGCCTGTCTTCA	8936	False	NA	NA	False	AATAGA	-13	NA	47706059	47699402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
transcript_31578.nic	chr12	-	893	4	Fusion	ENSG00000276390.1_ENSG00000005175.10	novel	420	3	NA	NA	-29	-279	multi-exon	FALSE	canonical	2	17	junction_1	180.544238961597	235	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTGTCTTTTGGTG	8936	False	NA	-4	True	AATAAA	-16	NA	47706059	47699679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
transcript_31580.known	chr12	-	621	3	FSM	ENSG00000005175.10	ENST00000551293.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	19.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTTATCCAGTGTG	17	True	NA	NA	False	NA	NA	NA	47705999	47701190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47701605_47702687_47702847_47705951
transcript_31583.known	chr12	-	2133	16	FSM	ENSG00000005175.10	ENST00000432584.7	2133	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	89.3410444433141	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTGTAAGGATCAGC	-10	True	NA	-14	True	AATAAA	-16	NA	47706026	47663291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47705951
transcript_31584.known	chr12	-	420	3	FSM	ENSG00000005175.10	ENST00000547706.1	420	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	181	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	3200	False	NA	NA	False	NA	NA	NA	47702816	47700014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47700165_47701463_47701605_47702687
transcript_31585.known	chr12	-	4092	16	FSM	ENSG00000079337.16	ENST00000395358.7	4092	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.96316371938716	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGCATTGTGAATATTTAG	462	False	NA	-3	True	AATAAA	-19	NA	47758645	47744452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47746900_47747543_47747627_47747711_47747863_47748073_47748153_47748453_47748543_47748818_47748932_47749389_47749537_47749740_47749818_47749929_47749991_47750340_47750426_47751047_47751217_47751398_47751521_47751722_47751830_47751915_47751970_47757865_47758079_47758550
transcript_31591.known	chr12	+	579	4	FSM	ENSG00000257433.7	ENST00000692059.1	1311	4	70	662	4	-1	multi-exon	FALSE	canonical	0	0	junction_3	8.33999733546454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTGATTTCTTTC	9	True	NA	NA	False	NA	NA	NA	47706127	47729203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47719599_47719700_47728886
transcript_31592.known	chr12	+	1457	4	FSM	ENSG00000257433.7	ENST00000663280.1	1457	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.17856276425687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCACCAAATATTTCAAGG	3	True	NA	NA	False	NA	NA	NA	47706087	47721061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47719604_47719700_47719901
transcript_31593.nic	chr12	+	646	4	FSM	ENSG00000257433.7	ENST00000553045.3	625	4	-22	1	-2	-1	multi-exon	FALSE	canonical	0	0	junction_3	8.17856276425687	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTGATTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	47706055	47729203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47719604_47719700_47728886
transcript_31597.known	chr12	+	577	4	FSM	ENSG00000211584.14	ENST00000549243.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1.63299316185545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTCGTGGGCGTCCTC	-19	True	NA	NA	False	GGGGCT	-9	NA	47758993	47779111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47759150_47760215_47760402_47772169_47772321_47779027
transcript_31599.known	chr12	+	1737	3	FSM	ENSG00000257433.7	ENST00000659426.1	1737	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCAAGTAAAGAAGCAGG	3	True	NA	NA	False	NA	NA	NA	47706087	47721139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47719604
transcript_316.known	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	2055	junction_14	3299.83510418987	3449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_31600.nnic	chr12	+	552	3	FSM	ENSG00000257433.7	ENST00000690770.1	501	3	-51	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_2	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGATTTCTTTCC	NA	False	NA	NA	False	NA	NA	NA	47706055	47729204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47728886
transcript_31605.nic	chr12	+	696	2	FSM	ENSG00000257433.7	ENST00000692962.1	628	2	-68	0	-2	0	multi-exon	FALSE	canonical	3	19	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-22	NA	47706055	47719734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146
transcript_31606.known	chr12	+	882	2	FSM	ENSG00000211584.14	ENST00000552003.1	882	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAGTAGAGAACAGCTCTA	-3	True	NA	NA	False	NA	NA	NA	47753929	47756485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47754028_47755701
transcript_31607.known	chr12	+	457	1	FSM	ENSG00000257433.7	ENST00000621159.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCTCTGAGTCTTTCTT	9	True	NA	NA	False	AGTAAA	-18	NA	47706093	47706550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706100_47706600
transcript_31608.known	chr12	+	776	8	FSM	ENSG00000134291.12	ENST00000550552.5	776	8	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	68.5103894996062	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGTAGAAGAGAGCACAG	23	True	NA	NA	False	NA	NA	NA	47963608	47968256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_31610.known	chr12	+	810	8	FSM	ENSG00000134291.12	ENST00000552561.5	810	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_5	66.6844534095513	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCTATTGGTTCTTCC	19	True	NA	NA	False	NA	NA	NA	47963604	47968229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47963634_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_31612.known	chr12	+	1414	8	FSM	ENSG00000134291.12	ENST00000449758.6	1414	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	83.8246469039472	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	4	True	NA	-22	True	NA	NA	NA	47963634	47968849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_31614.known	chr12	+	1539	8	FSM	ENSG00000134291.12	ENST00000429772.7	1539	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	82.4697842007753	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	10	True	NA	7	True	AATAAA	-17	NA	47963595	47968878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_31629.known	chr12	+	321	3	FSM	ENSG00000134291.12	ENST00000549288.5	321	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	68.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGGAGGAAATTCCACA	10	True	NA	NA	False	NA	NA	NA	47963595	47968200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47963634_47964208_47964424_47968132
transcript_31635.known	chr12	+	587	3	FSM	ENSG00000134291.12	ENST00000549287.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGATCTTTTCAGCTGTT	2925	False	NA	NA	False	AATAAA	-17	NA	47966555	47968488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47966733_47967207_47967262_47968132
transcript_31636.known	chr12	-	747	2	FSM	ENSG00000139219.19	ENST00000490609.2	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGCTTCCAAGACAC	NA	False	NA	NA	False	NA	NA	NA	48004554	47999696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48000126_48004236
transcript_3164.known	chr1	+	1834	10	FSM	ENSG00000121775.18	ENST00000468135.5	1834	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.8333003822212	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	3	True	NA	83	True	AAAAAG	-24	NA	32072968	32102866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076563_32076647_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_31640.known	chr12	+	3476	25	FSM	ENSG00000152556.17	ENST00000340802.12	3476	25	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	173.510201229079	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	0	True	NA	4	True	AATAAA	-15	NA	48105922	48146404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48106138_48107364_48107456_48108071_48108195_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_31642.known	chr12	+	2744	23	FSM	ENSG00000152556.17	ENST00000550924.6	2744	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.072150108103	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCAGCTTTATCTGTCA	136	False	NA	NA	False	NA	NA	NA	48105620	48145911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48105811_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_31643.known	chr12	+	3090	23	FSM	ENSG00000152556.17	ENST00000359794.11	3090	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.072150108103	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	15	True	NA	4	True	AATAAA	-15	NA	48119363	48146404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_31647.known	chr12	+	3063	22	FSM	ENSG00000152556.17	ENST00000546964.5	3063	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.962325388254	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	-6	True	NA	9	True	AATAAA	-19	NA	48119342	48146104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_31656.known	chr12	-	4679	18	FSM	ENSG00000079387.14	ENST00000448372.5	4679	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_17	37.2235368483669	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGCCCAAAGGCATG	501	False	NA	NA	False	AAAAAG	-12	NA	48105808	48042973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468_48101517_48105456
transcript_3166.known	chr1	+	2713	9	FSM	ENSG00000121774.18	ENST00000327300.12	2713	9	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	246.658544348255	855	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	4	True	NA	NA	False	AATAAA	-23	NA	32013867	32043877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
transcript_31661.nic	chr12	+	1109	9	ISM	ENSG00000152556.17	ENST00000546964.5	3063	22	-14	10886	2	389	5prime_fragment	FALSE	canonical	0	0	junction_1	167.174637355671	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTCTCTGCTTGTTTT	-20	True	NA	3	True	NA	NA	NA	48119328	48135218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942
transcript_31667.known	chr12	-	2610	4	FSM	ENSG00000177981.11	ENST00000536549.5	2610	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	13.3666251038423	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	-4	True	NA	0	True	AATAAA	-16	NA	48157595	48147788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48149999_48151200_48151306_48153367_48153526_48157458
transcript_31669.known	chr12	+	2283	1	FSM	ENSG00000177875.5	ENST00000316554.5	2283	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGACTGGTACTAAGG	6	True	NA	15	True	AATAAA	-19	NA	48183643	48185926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48183600_48185900
transcript_3167.known	chr1	+	1778	9	FSM	ENSG00000121775.18	ENST00000336294.10	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	35.0962961008708	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	-27	True	NA	80	True	AAAAAG	-21	NA	32072938	32102863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_31685.known	chr12	-	2373	10	FSM	ENSG00000139620.13	ENST00000420613.7	2373	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	76.1997051288809	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTTCTTTTTACCC	1	True	NA	68	True	ATTAAA	-17	NA	48682238	48653210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_31686.known	chr12	-	2714	9	FSM	ENSG00000139620.13	ENST00000550347.5	2714	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	79.913625246262	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	14	True	NA	-1	True	AAGAAA	-40	NA	48682225	48653401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381
transcript_31687.known	chr12	-	6788	9	FSM	ENSG00000129315.11	ENST00000261900.8	6788	9	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	5.63332716962187	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	22	True	NA	0	True	AATAAA	-21	NA	48716707	48688457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48694437_48695758_48695830_48695998_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_31689.known	chr12	-	2017	8	FSM	ENSG00000129315.11	ENST00000417344.2	2017	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.01019665507731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAGAAGAGGAG	54	True	NA	NA	False	NA	NA	NA	48716675	48693032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48694437_48695758_48695830_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_31690.nic	chr12	-	786	3	ISM	ENSG00000129315.11	ENST00000640148.1	596	7	-39	7484	-39	187	5prime_fragment	FALSE	canonical	3	9	junction_2	2	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGCCAGATGTGGTGG	-29	True	NA	NA	False	AAAAAG	-5	NA	48716758	48705436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_48705897_48714442_48714525_48716514
transcript_31691.known	chr12	-	6915	8	FSM	ENSG00000129315.11	ENST00000618666.4	6915	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.01019665507731	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	68	False	NA	0	True	AATAAA	-21	NA	48716998	48688457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48694437_48695758_48695830_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_31693.known	chr12	+	473	3	FSM	ENSG00000257660.5	ENST00000549864.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTTTTCAGAATCAGAT	NA	False	NA	9	True	AATAAA	-23	NA	48789575	48790535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48789691_48789984_48790120_48790312
transcript_31694.nic	chr12	+	844	2	ISM	ENSG00000257660.5	ENST00000547774.5	439	3	352	0	-77	0	3prime_fragment	FALSE	canonical	3	8	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTTTTCAGAATCAGAT	NA	False	NA	9	True	AATAAA	-23	NA	48789498	48790535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_48790120_48790312
transcript_31697.known	chr12	+	1814	13	FSM	ENSG00000167535.8	ENST00000540990.5	1814	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.8051270017527	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGGATCCCCTTAGCAG	NA	False	NA	NA	False	NA	NA	NA	48814450	48828200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48814554_48823343_48823467_48823680_48823804_48824257_48824374_48824668_48824734_48824948_48824969_48825162_48825244_48825433_48825493_48825659_48825770_48826366_48826519_48826758_48826855_48826973_48827124_48827584
transcript_31699.known	chr12	-	3256	17	FSM	ENSG00000174243.10	ENST00000308025.8	3256	17	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_11	17.8289397819949	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAGTTCTAGTTAAACT	-1	True	NA	-5	True	AATAAA	-23	NA	48852163	48829755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48830693_48831141_48831317_48832077_48832187_48832421_48832574_48833276_48833520_48834319_48834498_48836120_48836267_48836568_48836795_48836893_48837038_48837280_48837394_48837523_48837658_48837941_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_31700.known	chr12	-	1083	6	FSM	ENSG00000174243.10	ENST00000551098.5	1083	6	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	13.4372616257927	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTAAGGTGCAGGCCTT	3	True	NA	NA	False	NA	NA	NA	48852138	48837532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_31701.known	chr12	-	1653	5	FSM	ENSG00000172602.11	ENST00000309739.6	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	7.08431365765238	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCGTATTTTTTTC	-2	True	NA	-11	True	TATAAA	-4	NA	48865870	48857144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
transcript_31702.nic	chr12	-	983	4	ISM	ENSG00000172602.11	ENST00000309739.6	1653	5	-2	3427	-2	458	5prime_fragment	FALSE	canonical	3	112	junction_1	7.78888096369861	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGCTG	-4	True	NA	NA	False	NA	NA	NA	48865872	48860571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_48861132_48862008_48862119_48864782_48864871_48865647
transcript_31704.known	chr12	+	1792	8	FSM	ENSG00000139537.11	ENST00000320516.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.59078981795143	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCTTTATATCTTTTC	-12	True	NA	NA	False	ATTAAA	-18	NA	48904132	48921576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48904469_48904945_48905114_48914403_48914574_48916969_48917109_48918274_48918473_48918684_48918904_48920929_48921083_48921167
transcript_31705.known	chr12	-	725	6	FSM	ENSG00000134285.11	ENST00000256680.10	725	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	192.540281499742	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTTTAAAAAACTTATT	19	True	NA	-30	True	AATAAA	-4	NA	48925485	48921976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925167_48925299
transcript_31713.known	chr12	-	563	2	FSM	ENSG00000134287.10	ENST00000485410.5	563	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTGAAGCTCAGGGCT	80	False	NA	76	True	NA	NA	NA	48957445	48938420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48938848_48957309
transcript_31717.known	chr12	-	4957	1	FSM	ENSG00000134285.11	ENST00000553027.1	4957	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTAGGAGTTGAAAGATT	NA	False	NA	NA	False	NA	NA	NA	48926474	48921517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48921500_48926500
transcript_31718.known	chr12	-	691	6	FSM	ENSG00000134285.11	ENST00000550765.6	691	6	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	39.8768103037342	2412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGCATTCTTCATCT	12	True	NA	-16	True	AATAAA	-18	NA	48925492	48921962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_31719.known	chr12	-	630	5	FSM	ENSG00000134285.11	ENST00000444214.6	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	188.741224961586	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-2	True	NA	-12	True	AATAAA	-22	NA	48924967	48921958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48924773
transcript_31720.known	chr12	-	4041	5	FSM	ENSG00000134287.10	ENST00000256682.9	4041	5	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_1	25.8891869319992	3244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGTGTAATGACCTTA	-15	True	NA	-36	True	AATAAA	-18	NA	48957487	48935722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_31721.known	chr12	-	1089	4	FSM	ENSG00000134287.10	ENST00000447318.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	361.499654218369	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCCTTTGCCACCCTCT	-5	True	NA	-57	True	NA	NA	NA	48957477	48938553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48939109_48939654_48939780_48940947_48941189_48957309
transcript_31722.known	chr12	-	807	6	FSM	ENSG00000134287.10	ENST00000541959.5	807	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	416.53215962276	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCACCCACCCCTGACA	80	False	NA	NA	False	AAAACA	-31	NA	48957445	48938924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48941567_48941578_48957309
transcript_31723.known	chr12	-	517	4	FSM	ENSG00000134285.11	ENST00000551094.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_1	42.9444085093999	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	813	False	NA	-12	True	AATAAA	-22	NA	48924729	48921958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560
transcript_31727.known	chr12	-	1497	12	FSM	ENSG00000181929.13	ENST00000552212.5	1497	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	102.551418266301	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCAGACAAATTCTGAT	1	True	NA	NA	False	NA	NA	NA	49018748	49002613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018523
transcript_31732.known	chr12	-	1657	12	FSM	ENSG00000181929.13	ENST00000548065.7	1657	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_11	35.1570267361394	2293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAGTGTTTGATTTTT	1	True	NA	-26	True	ATTAAA	-21	NA	49018776	49002273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_31733.known	chr12	-	1679	12	FSM	ENSG00000181929.13	ENST00000546531.5	1679	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	102.861296321754	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCAAATCTAATTAAATG	-10	True	NA	-64	True	NA	NA	NA	49018787	49002311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005593_49005742_49005853_49013061_49013111_49018731
transcript_31734.known	chr12	-	1531	11	FSM	ENSG00000181929.13	ENST00000547306.5	1531	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	105.136863183186	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	13	True	NA	-30	True	ATTAAA	-17	NA	49018764	49002277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49013061_49013111_49018731
transcript_31735.known	chr12	-	1683	12	FSM	ENSG00000181929.13	ENST00000316299.9	1683	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	104.167220935164	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	-2	True	NA	-30	True	ATTAAA	-17	NA	49018779	49002277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005392_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_31737.nnic	chr12	-	1338	8	NNC	ENSG00000167550.11	novel	1173	8	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.6192982442255	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	NA	False	NA	-14	True	AATAAA	-13	NA	49070006	49064685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069585
transcript_31738.known	chr12	-	1173	8	FSM	ENSG00000167550.11	ENST00000301068.11	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	7.77226886213454	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTCGTGTGTGTGT	-1	True	NA	-4	True	AATAAA	-23	NA	49069979	49064675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069733
transcript_31740.known	chr12	-	1261	8	FSM	ENSG00000167550.11	ENST00000550797.1	1261	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	20.976176963403	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGAGAAATCTTTTGT	NA	False	NA	-30	True	AATAGA	-36	NA	49070025	49064701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069175_49069733
transcript_31742.known	chr12	-	1063	7	FSM	ENSG00000167550.11	ENST00000420065.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	22.1785682335197	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	31	False	NA	-14	True	AATAAA	-13	NA	49069947	49064685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49069034_49069107_49069733
transcript_31753.known	chr12	-	2235	17	FSM	ENSG00000139636.16	ENST00000547382.5	2235	17	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	17.7833094150105	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACCTGTCTCTGTGTA	-2	True	NA	-7	True	AATAAA	-30	NA	49110850	49097141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_31754.known	chr12	-	2295	17	FSM	ENSG00000139636.16	ENST00000267102.13	2295	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	12.677335830134	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCTGTGTATAT	1	True	NA	-4	True	AATAAA	-33	NA	49110847	49097138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_3176.known	chr1	+	1538	7	FSM	ENSG00000121775.18	ENST00000441402.5	1538	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	24.1413660664751	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	-23	True	NA	83	True	AAAAAG	-24	NA	32072942	32102866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_31793.known	chr12	-	1887	4	FSM	ENSG00000167552.15	ENST00000295766.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_3	1164.84772490752	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAAAGTTGTGGT	299	False	NA	NA	False	NA	NA	NA	49188899	49184958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188416
transcript_31794.known	chr12	-	1782	4	FSM	ENSG00000167552.15	ENST00000552924.2	1782	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1460.49649092355	3647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-5	True	NA	7	True	AATGAA	-25	NA	49189078	49184770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188888
transcript_31797.known	chr12	+	319	2	FSM	ENSG00000258017.3	ENST00000551496.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTTTTTTCCTATTTT	104	False	NA	NA	False	AATGAA	-20	NA	49131709	49147865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49131826_49147662
transcript_31798.known	chr12	-	1453	2	FSM	ENSG00000258101.2	ENST00000549023.2	1453	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACAGAGTGTTTGGGA	347	False	NA	NA	False	AATAAA	-31	NA	49264756	49232789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49234139_49264652
transcript_31799.known	chr12	-	1627	4	FSM	ENSG00000123416.15	ENST00000336023.9	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	8406	junction_1	791.097128465694	107507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTCCTGCGTTTTT	-1	True	NA	-23	True	AGTAAA	-17	NA	49131395	49127781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49128939_49129241_49129391_49129499_49129723_49131297
transcript_31800.known	chr12	-	3198	3	FSM	ENSG00000123416.15	ENST00000332858.10	3198	3	0	0	0	0	multi-exon	FALSE	canonical	3	8406	junction_1	520	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTGTTTCCTGCGT	-1	True	NA	-27	True	AGTAAA	-13	NA	49131395	49127785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49128939_49129241_49129391_49129499
transcript_31801.known	chr12	-	1672	4	FSM	ENSG00000167552.15	ENST00000301071.12	1672	4	0	0	0	0	multi-exon	FALSE	canonical	3	2716	junction_1	447.904007573051	22567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTGTGTTTTCTAT	-7	True	NA	-17	True	AATAAA	-22	NA	49189080	49184794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188976
transcript_31802.known	chr12	-	1802	4	FSM	ENSG00000167552.15	ENST00000679733.1	1802	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1600.02090264124	2949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATTTAAAGTATCTTA	-5	True	NA	92	True	AATAAA	-45	NA	49189078	49184685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49185991_49186309_49186459_49186587_49186834_49188976
transcript_31803.known	chr12	+	2823	4	FSM	ENSG00000167553.17	ENST00000301072.11	2823	4	0	0	0	0	multi-exon	FALSE	canonical	3	752	junction_2	185.387881660767	11608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCTTGGAATCCTGAT	0	True	NA	23	True	AATAAA	-16	NA	49265081	49274600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49265185_49269464_49269688_49269827_49269977_49272252
transcript_31806.known	chr12	+	865	5	FSM	ENSG00000135406.14	ENST00000530631.1	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTTGAACCAAATAA	1407	False	NA	NA	False	NA	NA	NA	49297120	49298648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49297274_49297356_49297578_49297676_49297727_49297957_49298038_49298287
transcript_31810.known	chr12	+	675	4	FSM	ENSG00000135451.13	ENST00000380327.9	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	156.034896381831	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTCCCCATGTCAC	-13	True	NA	28	True	AATAAA	-40	NA	49323254	49324392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324154
transcript_31811.known	chr12	+	623	4	FSM	ENSG00000135451.13	ENST00000548311.5	623	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	132.03619032506	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGTGTTCTCCTA	-13	True	NA	52	True	AATAAA	-45	NA	49323254	49324416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324230
transcript_31812.known	chr12	+	778	3	FSM	ENSG00000135451.13	ENST00000550709.5	778	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	10.5	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCCTTTTCCAGT	-11	True	NA	16	True	AATAAA	-28	NA	49323256	49324380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844
transcript_31813.known	chr12	+	2551	15	FSM	ENSG00000135451.13	ENST00000257909.8	2551	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_11	74.4740743823113	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	-13	True	NA	13	True	AATAAA	-13	NA	49323254	49331731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213_49331408_49331572
transcript_31814.known	chr12	+	839	2	FSM	ENSG00000135451.13	ENST00000549534.1	839	2	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATATCACTTCTTCT	5	True	NA	1	True	AATAAA	-13	NA	49323272	49324365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603
transcript_31815.known	chr12	+	2771	14	FSM	ENSG00000135451.13	ENST00000551245.5	2771	14	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_11	74.8725939542887	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTCTGCCCATGGGACT	-24	True	NA	-48	True	NA	NA	NA	49323243	49331670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49331408_49331572
transcript_31817.known	chr12	+	4447	4	FSM	ENSG00000178401.16	ENST00000549441.7	4447	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTATTCTCTCTATTCTC	-2	True	NA	NA	False	AATAAA	-28	NA	49346887	49353690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49347552_49347643_49348106_49348765_49349713_49351316
transcript_31819.known	chr12	+	3320	15	FSM	ENSG00000123352.18	ENST00000553127.5	3320	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	86.6779165906161	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGTTTCATAGCAGCA	6	True	NA	17	True	AATAAA	-26	NA	49367464	49527424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49371227_49371291_49387053_49387138_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_31823.known	chr12	+	3240	14	FSM	ENSG00000123352.18	ENST00000552918.6	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	44.1612162168512	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCATAGCAGCAA	3	True	NA	18	True	AATAAA	-27	NA	49367461	49527425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_31827.known	chr12	+	3158	13	FSM	ENSG00000123352.18	ENST00000321898.10	3158	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	26.840061268352	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTTTTGTTTCATAG	16	True	NA	12	True	AATAAA	-21	NA	49367474	49527419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_31843.known	chr12	+	2781	15	FSM	ENSG00000123352.18	ENST00000549412.5	2781	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	87.4548279900859	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCATTCTAAGTA	2	True	NA	19	True	AAAAAG	-18	NA	49366904	49526365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49512861_49512906_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_31852.known	chr12	+	1061	5	FSM	ENSG00000123352.18	ENST00000549375.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	39.1942278913618	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCGACCTTGAAACATA	3	True	NA	NA	False	NA	NA	NA	49367461	49491159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681
transcript_3186.known	chr1	+	7355	14	FSM	ENSG00000025800.14	ENST00000373625.8	7355	14	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_9	20.6434940393783	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATTGTCTTCTTTGGCT	2	True	NA	15	True	AATAAA	-17	NA	32108055	32176563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32108135_32154587_32154722_32156852_32156946_32157345_32157446_32158266_32158362_32159399_32159532_32160614_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_31862.known	chr12	+	720	6	FSM	ENSG00000123352.18	ENST00000551540.5	720	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	126.235652650113	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTACTCAAAGAATGGA	-11	True	NA	NA	False	NA	NA	NA	49367495	49490691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49454224_49454386_49460769_49461038_49484589_49484670_49489464_49489574_49490681
transcript_31864.known	chr12	-	1936	16	FSM	ENSG00000187778.14	ENST00000550165.5	1936	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	201.1618474982	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCAGACTCTTCTTT	24	True	NA	-25	True	AAAACA	-45	NA	49568101	49558362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646_49567750_49568047
transcript_31871.nic	chr12	-	1823	14	NIC	ENSG00000187778.14	novel	1938	15	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_13	159.64390848007	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-25	False	NA	-7	True	AATAAA	-18	NA	49568150	49558301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49568047
transcript_31872.known	chr12	-	1666	13	FSM	ENSG00000187778.14	ENST00000548602.5	1666	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	174.896378051564	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTATTTTATTTTTTTT	-6	True	NA	-6	True	AATAAA	-19	NA	49568131	49558300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49568047
transcript_31873.known	chr12	-	1938	15	FSM	ENSG00000187778.14	ENST00000343810.9	1938	15	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_5	47.6864760702655	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTATTTTTTTTTT	-17	True	NA	-4	True	AATAAA	-21	NA	49568142	49558298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
transcript_31875.known	chr12	+	3182	26	FSM	ENSG00000110844.14	ENST00000548825.7	3182	26	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_2	21.3468124084136	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGACTCTTTTCCATG	0	True	NA	9	True	TTTAAA	-20	NA	49623560	49644665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642929_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_31881.known	chr12	+	2771	11	FSM	ENSG00000139644.13	ENST00000549385.5	2771	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1223.24422745419	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAACACCTA	2	False	NA	77	True	ATTAAA	-14	NA	49741573	49764726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49741612_49741956_49742116_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_31894.known	chr12	+	882	10	FSM	ENSG00000139644.13	ENST00000552370.5	882	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	996.624426207576	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTGCACACATTACA	-16	True	NA	-25	True	NA	NA	NA	49750619	49762948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49750706_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_31895.known	chr12	+	3154	25	FSM	ENSG00000110844.14	ENST00000380281.5	3154	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	24.2451312409087	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGACTCTTTTCCATGT	6983	False	NA	10	True	TTTAAA	-21	NA	49630543	49644666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642926_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_31896.known	chr12	+	2837	10	FSM	ENSG00000139644.13	ENST00000267115.10	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	2715	junction_1	225.804460365573	4728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTTGTGTTAAATT	0	True	NA	20	True	AATAAA	-19	NA	49741556	49764934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49741612_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_31897.known	chr12	+	2494	8	FSM	ENSG00000139644.13	ENST00000547798.1	2494	8	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_5	144.130326511835	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAAAACAC	2328	False	NA	74	True	ATTAAA	-11	NA	49752963	49764723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_3190.known	chr1	+	4865	11	FSM	ENSG00000084652.16	ENST00000373610.8	4865	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	29.5298154413467	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	-5	True	NA	14	True	AATAAA	-16	NA	32179674	32198285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32179777_32180313_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_31904.known	chr12	+	3078	3	FSM	ENSG00000258057.6	ENST00000548872.5	3078	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAGCTACTAATAGTG	-7	True	NA	NA	False	TATAAA	-11	NA	49828541	49841143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49828749_49828934_49829084_49838421
transcript_31908.known	chr12	+	1994	2	FSM	ENSG00000258057.6	ENST00000653240.1	1994	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCAATAAAACTCCATGT	2	True	NA	NA	False	AAAAAG	-32	NA	49828550	49830730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49828749_49828934
transcript_31910.known	chr12	-	3226	2	FSM	ENSG00000186666.6	ENST00000333924.6	3226	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTTGTGGTGATTTC	-1	True	NA	-2	True	AATAAA	-17	NA	49843106	49836042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49839016_49842853
transcript_31912.known	chr12	-	4882	13	FSM	ENSG00000167566.17	ENST00000335999.7	4882	13	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_11	8.58292879305582	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCCCTGAGTCGGCT	-1	True	NA	-14	True	AATAAA	-15	NA	49828413	49791151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49792052_49792445_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
transcript_31913.known	chr12	+	813	3	FSM	ENSG00000258057.6	ENST00000551146.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTACTCATATCCTTG	44	False	NA	NA	False	NA	NA	NA	49828592	49832466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49828749_49828934_49829084_49831958
transcript_31914.known	chr12	+	331	1	FSM	ENSG00000242041.1	ENST00000459730.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAACTAATGAAAAGTCAAC	NA	False	NA	NA	False	NA	NA	NA	49863172	49863503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49863200_49863500
transcript_31916.known	chr12	-	4667	12	FSM	ENSG00000135472.9	ENST00000320634.8	4667	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	2.18560277821297	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTCCCTCGTCTGCCG	-19	True	NA	NA	False	AATAAA	-19	NA	49903900	49866895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49870654_49887385_49887440_49889106_49889203_49889480_49889569_49890116_49890155_49890682_49890723_49891063_49891115_49897030_49897085_49897518_49897584_49897986_49898091_49901129_49901326_49903777
transcript_31918.known	chr12	-	1047	11	FSM	ENSG00000135472.9	ENST00000550195.5	1047	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.60959767013998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCTGCCAACCCAGCCT	12	True	NA	NA	False	TATAAA	-1	NA	49903869	49870414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49870654_49887385_49887440_49889106_49889203_49890116_49890155_49890682_49890723_49891063_49891115_49897030_49897085_49897518_49897602_49897986_49898091_49901129_49901326_49903777
transcript_31919.known	chr12	+	1449	4	FSM	ENSG00000161798.7	ENST00000293599.7	1449	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCACCTCTGTCTCTCCT	0	True	NA	15	True	AATAAA	-15	NA	49961871	49965682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49962381_49963491_49963657_49964091_49964176_49964991
transcript_31924.known	chr12	-	3080	17	FSM	ENSG00000161800.13	ENST00000454520.6	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_16	45.9127909737581	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	48	True	NA	NA	False	AGTAAA	-17	NA	50025400	49989163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_31925.nnic	chr12	-	3089	17	NIC	ENSG00000161800.13	novel	3106	17	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_16	57.6709076896662	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-4	True	NA	NA	False	AGTAAA	-19	NA	50025452	49989161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025372
transcript_31927.nic	chr12	-	2000	16	NIC	ENSG00000161800.13	novel	932	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	69.3824825794587	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCACTGAATCTCAAATC	-24	True	NA	-5	True	ATTAAA	-27	NA	50025472	49976922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_49977060_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_31940.known	chr12	-	3106	17	FSM	ENSG00000161800.13	ENST00000312377.10	3106	17	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_16	39.720458755533	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-46	True	NA	NA	False	AGTAAA	-19	NA	50025494	49989161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
transcript_31941.known	chr12	+	3237	12	FSM	ENSG00000066117.15	ENST00000381513.8	3237	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	127.907701743442	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	-26	True	NA	13	True	AATAAA	-14	NA	50085199	50100642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50098713_50098816_50098946
transcript_31942.known	chr12	+	2887	8	FSM	ENSG00000167588.13	ENST00000301149.8	2887	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_4	1.95875845725744	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGAGTTGGGAGAGGG	-3	True	NA	NA	False	AATAAA	-19	NA	50104007	50111313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50104092_50104573_50104752_50105547_50105689_50106287_50106427_50106804_50106918_50107566_50107801_50108023_50108131_50109422
transcript_31944.known	chr12	+	794	3	FSM	ENSG00000167588.13	ENST00000550172.1	794	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAGGGGCACAGAGGC	1109	False	NA	NA	False	NA	NA	NA	50105145	50106916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50105689_50106287_50106427_50106804
transcript_31947.known	chr12	-	2132	11	FSM	ENSG00000139624.14	ENST00000547787.5	2132	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	188.98719533344	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	41	True	NA	-16	True	ATTAAA	-14	NA	50167303	50129798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50144768_50144970_50167100
transcript_31957.known	chr12	+	580	3	FSM	ENSG00000178449.9	ENST00000550654.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTGTTTTTTGTTTAC	-12	True	NA	19	True	ATTAAA	-19	NA	50112203	50120457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112302_50118492_50118553_50120035
transcript_31958.known	chr12	+	708	3	FSM	ENSG00000178449.9	ENST00000317943.6	708	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	48	False	NA	13	True	ATTAAA	-13	NA	50112081	50120451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112302_50112831_50112904_50120035
transcript_3196.known	chr1	+	880	6	FSM	ENSG00000160050.16	ENST00000373602.10	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	16.1319558640606	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	-36	True	NA	NA	False	ATTAAA	-16	NA	32200594	32205387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597_32204621_32205193
transcript_31960.known	chr12	+	677	2	FSM	ENSG00000178449.9	ENST00000548985.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	21	True	NA	13	True	ATTAAA	-13	NA	50112236	50120451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112498_50120035
transcript_31961.known	chr12	+	698	2	FSM	ENSG00000272368.2	ENST00000548468.2	698	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACACAAGATTTTGAAA	-19	True	NA	NA	False	AATAAA	-21	NA	50112196	50165618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112302_50165025
transcript_31963.known	chr12	+	484	2	FSM	ENSG00000178449.9	ENST00000550487.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	5645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGGTGTTTTTTGT	20	True	NA	15	True	ATTAAA	-15	NA	50112235	50120453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112302_50120035
transcript_31964.known	chr12	-	2507	10	FSM	ENSG00000139624.14	ENST00000317551.12	2507	10	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_9	40.307460327149	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-25	True	NA	NA	False	AATAAA	-13	NA	50167369	50129288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_31965.known	chr12	-	3669	11	FSM	ENSG00000050405.14	ENST00000394943.7	3669	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	57.7421856184887	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	0	True	NA	-12	True	AATAAA	-21	NA	50283506	50175787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_31968.known	chr12	-	2162	8	FSM	ENSG00000050405.14	ENST00000552909.5	2162	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	58.5954654510788	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTAAATACTAGAGATAAC	-6	True	NA	NA	False	AAAACA	-25	NA	50222356	50176884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50178070_50181903_50182035_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
transcript_3197.known	chr1	+	780	6	FSM	ENSG00000160050.16	ENST00000461819.5	780	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	130.467773798743	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCGGCTCCGTGTCCTG	13	True	NA	NA	False	ATTAAA	-12	NA	32200643	32205383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204232_32204380_32204597_32204621_32205193
transcript_31974.known	chr12	-	583	5	FSM	ENSG00000050405.14	ENST00000551691.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.5163890393343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCACCTCCTGAAGCCCTC	22	True	NA	NA	False	NA	NA	NA	50283484	50222259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50222486_50231664_50231711_50248632_50248775_50249682_50249787_50283419
transcript_31975.known	chr12	-	3706	11	FSM	ENSG00000050405.14	ENST00000341247.9	3680	11	-26	0	-26	0	multi-exon	FALSE	canonical	3	61	junction_9	46.1415214313529	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	NA	False	NA	-12	True	AATAAA	-21	NA	50283546	50175787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_31981.known	chr12	+	2853	16	FSM	ENSG00000161813.23	ENST00000518444.5	2853	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	93.7016542009798	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGTAGATTTTTTTT	38	True	NA	16	True	AGTAAA	-22	NA	50400928	50476463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50427764_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_3199.known	chr1	+	1415	5	FSM	ENSG00000160050.16	ENST00000421922.6	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_3	14.8155323900291	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	2	True	NA	NA	False	ATTAAA	-16	NA	32200632	32205387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597
transcript_31993.known	chr12	+	1949	15	NNC	ENSG00000161813.23	novel	6296	15	NA	NA	-1	-494	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	147.297976488311	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGAGAAAGTACGTCC	16	True	NA	NA	False	NA	NA	NA	50400906	50475962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441596_50441597_50441644_50454313_50454418_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_31996.known	chr12	+	3621	15	FSM	ENSG00000161813.23	ENST00000347328.9	3621	15	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	94.3828503965609	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAATGTAAATGGTGGTT	24	False	NA	NA	False	AGTAAA	-20	NA	50400984	50477497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_32.known	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72572	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00074_+_0_500
transcript_3200.known	chr1	+	633	5	FSM	ENSG00000160050.16	ENST00000681230.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	133.54283020814	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	17	True	NA	NA	False	ATTAAA	-16	NA	32200647	32205387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204597_32204621_32205193
transcript_32011.known	chr12	+	1578	12	FSM	ENSG00000161813.23	ENST00000518561.5	1578	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	118.807017629501	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	-5	True	NA	6	True	AATAAA	-17	NA	50400955	50461487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_32016.nnic	chr12	+	1913	11	NNC	ENSG00000161813.23	novel	1577	11	NA	NA	22	1156	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_10	119.706140193392	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGACTCTGAAATAC	NA	False	NA	5	True	AATAAA	-17	NA	50400830	50456118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50455506
transcript_32019.known	chr12	+	1577	11	FSM	ENSG00000161813.23	ENST00000522085.5	1577	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	69.758225321463	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	17	True	NA	6	True	AATAAA	-17	NA	50400907	50461487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_3202.known	chr1	+	2012	5	FSM	ENSG00000160051.12	ENST00000291358.11	2012	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	3.93700393700591	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	12	True	NA	12	True	AATAAA	-14	NA	32205670	32208682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32205724_32206153_32206298_32206508_32206762_32207001_32207121_32207239
transcript_32047.known	chr12	+	586	5	FSM	ENSG00000161813.23	ENST00000551886.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	164.812772563294	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATTCTTGAAGTGTT	41	True	NA	NA	False	AATAAA	-20	NA	50400931	50435599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430497_50430571_50435487
transcript_32052.known	chr12	+	435	1	FSM	ENSG00000244266.1	ENST00000498788.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTAATCTTATATACGA	49	False	NA	NA	False	AATACA	-30	NA	50365651	50366086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50365700_50366100
transcript_32053.known	chr12	+	584	4	FSM	ENSG00000161813.23	ENST00000548174.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	226.747044572189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTATGGTTTTATTG	-2	True	NA	NA	False	AATATA	-13	NA	50400888	50429091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50402674_50402814_50427761_50427910_50428934
transcript_32059.known	chr12	+	2412	7	FSM	ENSG00000123268.9	ENST00000262053.8	2412	7	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_1	14.0356688476182	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCCTGGCCATGCTG	19	True	NA	43	True	AATATA	-23	NA	50764100	50821162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50764308_50780139_50780239_50795908_50796010_50809455_50809590_50814009_50814193_50814279_50814440_50819634
transcript_3206.known	chr1	+	2089	4	FSM	ENSG00000160051.12	ENST00000617816.1	2089	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGATGATGCCACTGC	12	True	NA	NA	False	NA	NA	NA	32205670	32208548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32205724_32206153_32206762_32207001_32207121_32207239
transcript_32073.nnic	chr12	+	2154	3	NNC	ENSG00000185432.12	novel	3117	2	NA	NA	-362	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTATATCTTTGCTG	-3	True	NA	14	True	AATAAA	-26	NA	50924620	50932508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_50925537_50929913_50930221_50931577
transcript_32075.known	chr12	+	1846	3	FSM	ENSG00000185432.12	ENST00000550097.1	1846	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTGTAAAAGTACTAT	20	False	NA	7	True	AATAAA	-20	NA	50925040	50932438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50925537_50929913_50930423_50931597
transcript_32076.known	chr12	+	4076	3	FSM	ENSG00000185432.12	ENST00000548553.1	4076	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTATATCTTTGCTGGC	536	False	NA	16	True	AATAAA	-28	NA	50923471	50932510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50924081_50924666_50925537_50929913
transcript_32077.nic	chr12	-	2173	18	NIC	ENSG00000110911.17	novel	2125	18	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	13	junction_1	101.347529813548	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	1923	False	NA	-37	True	ATTAAA	-29	NA	51026411	50979819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_32078.known	chr12	-	2125	18	FSM	ENSG00000110911.17	ENST00000546636.5	2125	18	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	101.646718409016	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	3	True	NA	-37	True	ATTAAA	-29	NA	51026368	50979819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_32080.known	chr12	-	3762	17	FSM	ENSG00000110911.17	ENST00000644495.1	3762	17	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	83.3906235361626	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	-13	True	NA	-1	True	AATAAA	-18	NA	51026384	50979783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_32081.known	chr12	-	2486	17	FSM	ENSG00000110911.17	ENST00000547198.5	2486	17	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_1	83.8221470958004	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAAAGAGCTTTAATAT	-5	True	NA	-18	True	ATTAAA	-15	NA	51026338	50981008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_32082.known	chr12	-	3753	17	FSM	ENSG00000110911.17	ENST00000547688.7	3753	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	100.798065457627	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	1	True	NA	-1	True	AATAAA	-18	NA	51028242	50979783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51028176
transcript_3209.known	chr1	-	1538	11	FSM	ENSG00000160055.20	ENST00000491434.5	1538	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	19.7050754883101	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTGTGCCAAATATAC	12	True	NA	-49	True	AATATA	-13	NA	32222333	32214476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32215050_32215135_32215217_32215672_32215796_32216193_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866_32222019_32222306
transcript_32092.known	chr12	-	4132	16	FSM	ENSG00000110911.17	ENST00000262052.9	4132	16	0	0	0	0	multi-exon	FALSE	canonical	1	95	junction_8	70.514490236641	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-13	True	NA	0	True	ATTAAA	-20	NA	51026384	50985991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_32093.nic	chr12	-	4154	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-73	4983	-11	0	5prime_fragment	FALSE	canonical	1	95	junction_8	71.1044927475676	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	1923	False	NA	0	True	ATTAAA	-20	NA	51026411	50985991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_32094.known	chr12	-	4123	16	FSM	ENSG00000110911.17	ENST00000394904.9	4123	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_15	92.720847470003	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	1	True	NA	0	True	ATTAAA	-20	NA	51028242	50985991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51028176
transcript_321.known	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	6178	junction_10	2111.7668010986	4548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_32105.known	chr12	-	622	3	FSM	ENSG00000110911.17	ENST00000550329.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	91	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTTGAATTCCTGGGGT	-8	True	NA	NA	False	NA	NA	NA	51026379	51008144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51008625_51010694_51010767_51026309
transcript_32106.known	chr12	+	1389	9	FSM	ENSG00000050426.16	ENST00000550929.5	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	28.2043325572508	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTACTTACATCTGTG	NA	False	NA	NA	False	NA	NA	NA	51048317	51059805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048372_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32109.known	chr12	+	2106	9	FSM	ENSG00000050426.16	ENST00000262055.9	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.8116941111872	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCATACTCTAATCAT	-6	True	NA	28	True	AGTAAA	-30	NA	51048326	51060424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32114.nic	chr12	+	1927	8	NIC	ENSG00000050426.16	novel	1389	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	30.3065965743164	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	NA	False	NA	25	True	AGTAAA	-27	NA	51048279	51060421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_51048372_51049033_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32117.known	chr12	+	2001	8	FSM	ENSG00000050426.16	ENST00000547318.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	22.6643656295021	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATGGAAATGACTTAT	NA	False	NA	13	True	AGTAAA	-15	NA	51048300	51060409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32118.nic	chr12	+	1989	8	NIC	ENSG00000050426.16	novel	2001	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	23.265109200742	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	NA	False	NA	25	True	AGTAAA	-27	NA	51048290	51060421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_51048479_51049033_51049186_51053811_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32134.known	chr12	+	601	6	FSM	ENSG00000050426.16	ENST00000547660.5	601	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.22448215082	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGGACAAGGCGCTGAA	-6	True	NA	NA	False	NA	NA	NA	51048326	51059412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048372_51049033_51049186_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32135.known	chr12	+	1665	6	FSM	ENSG00000050426.16	ENST00000547008.5	1665	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	34.3604423720068	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGTTTTTAAACCCA	8	True	NA	-27	True	NA	NA	NA	51048340	51060369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51056349_51056503_51058031_51058129_51059360
transcript_32144.known	chr12	+	1713	6	FSM	ENSG00000050426.16	ENST00000552739.5	1713	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.873089298087	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACCTGTTGATGGAAA	13	False	NA	5	True	AGTAAA	-7	NA	51048345	51060401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32145.nic	chr12	+	1508	5	NIC	ENSG00000050426.16	novel	601	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	40.8679275226919	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	-6	True	NA	25	True	AGTAAA	-27	NA	51048326	51060421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_51048372_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_32147.known	chr12	+	1566	5	FSM	ENSG00000050426.16	ENST00000380135.7	1566	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	40.1707293934277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAAGCACTGTTTTTA	11	True	NA	-33	True	NA	NA	NA	51048343	51060363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058005_51058129_51059360
transcript_32148.known	chr12	+	1480	5	FSM	ENSG00000050426.16	ENST00000550100.5	1480	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	33.436506994601	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTAGCTTTTGTGTG	11	True	NA	-93	True	NA	NA	NA	51048343	51060303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_32162.known	chr12	+	563	4	FSM	ENSG00000050426.16	ENST00000549686.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	36.7453700787218	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGGCAGAGAGAGGAGC	5	True	NA	NA	False	NA	NA	NA	51048337	51059532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51056349_51056503_51058031_51058129_51059360
transcript_32170.known	chr12	+	1658	5	FSM	ENSG00000050426.16	ENST00000547555.5	1658	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.6848919408261	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCATACTCTAATCAT	-6	True	NA	28	True	AGTAAA	-30	NA	51048326	51060424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048519_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_32171.known	chr12	-	4517	5	FSM	ENSG00000110925.7	ENST00000228515.6	4517	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	31.751968442917	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGTTACTCTTTGTCT	-2	True	NA	-1	True	ATTAAA	-17	NA	51083596	51061204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51064670_51067672_51067970_51073822_51074083_51076410_51076648_51083338
transcript_32173.known	chr12	-	3807	15	FSM	ENSG00000135457.11	ENST00000257915.10	3807	15	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_14	24.330316186073	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTTAGTGAATGATTA	-30	True	NA	95	True	TTTAAA	-35	NA	51173135	51093655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51095279_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51109120_51109274_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_32178.known	chr12	-	1862	14	FSM	ENSG00000135457.11	ENST00000548115.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	84.5418561647837	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCTGCTCCTTCCTTC	193	False	NA	NA	False	NA	NA	NA	51172912	51095221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51095276_51095988_51096041_51098775_51098919_51099654_51099780_51101934_51102026_51103669_51103764_51104154_51104204_51106524_51106614_51107235_51107347_51110876_51110984_51116314_51116421_51117670_51117748_51118620_51118773_51172300
transcript_3219.known	chr1	-	969	7	FSM	ENSG00000160055.20	ENST00000483001.5	969	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	20.3367483471014	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCCAGGGACAAGG	10	True	NA	NA	False	GGGGCT	-30	NA	32222335	32215846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_32192.known	chr12	-	577	5	FSM	ENSG00000170545.17	ENST00000605627.1	577	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	67.074585350936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTAACCAGGCCCTCTT	-2	True	NA	NA	False	NA	NA	NA	51270284	51245744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51246120_51246750_51246832_51253573_51253594_51269244_51269317_51270255
transcript_32193.known	chr12	+	2064	4	FSM	ENSG00000183283.16	ENST00000412716.8	2064	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.121265174912	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCATTTCATGAAT	-1	True	NA	11	True	AATAAA	-20	NA	51238825	51243933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51242329
transcript_32194.known	chr12	+	1117	4	FSM	ENSG00000183283.16	ENST00000425012.6	1117	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	154.379042907024	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCCCTTGGAGTTGGCT	-1	True	NA	NA	False	NA	NA	NA	51238825	51246717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51246060
transcript_32198.known	chr12	+	1045	4	FSM	ENSG00000183283.16	ENST00000604900.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	162.163155152115	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTGGAACCCTTGTGA	-2	True	NA	26	True	AATAAA	-31	NA	51238885	51271362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51270717
transcript_32199.known	chr12	+	1811	4	FSM	ENSG00000183283.16	ENST00000436900.2	1811	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.922198009623	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTGCAAGGATTCTTT	15	False	NA	NA	False	AATAAA	-44	NA	51238902	51243785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342_51240462_51240898_51241117_51242329
transcript_32201.known	chr12	+	587	4	FSM	ENSG00000183283.16	ENST00000551313.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	111.086552841567	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAATGTAACTGCTTTA	0	True	NA	NA	False	NA	NA	NA	51239294	51242510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51239336_51240342_51240462_51240870_51241117_51242329
transcript_32206.known	chr12	-	610	4	FSM	ENSG00000170545.17	ENST00000605426.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	60.4041941148681	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGATCTTGATCTTCTT	19	True	NA	NA	False	NA	NA	NA	51269958	51246084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51269536
transcript_32207.known	chr12	-	1875	4	FSM	ENSG00000170545.17	ENST00000603798.6	1875	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	57.2033410057684	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGCCTCTGTTGTCCA	-24	True	NA	2	True	ATTAAA	-25	NA	51270415	51244557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51270255
transcript_32209.known	chr12	+	701	3	FSM	ENSG00000183283.16	ENST00000439799.6	701	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAGTTGCCAAATTAT	-1	True	NA	NA	False	AATAAA	-41	NA	51238825	51242816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342_51240462_51242329
transcript_32211.known	chr12	+	485	3	FSM	ENSG00000183283.16	ENST00000551919.5	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	132.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCCGGGAAAGACATCA	0	True	NA	NA	False	NA	NA	NA	51238826	51242474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240870_51241117_51242329
transcript_32215.known	chr12	+	598	2	FSM	ENSG00000183283.16	ENST00000549041.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTCTTCTAGCTCTAT	10	False	NA	NA	False	CATAAA	-20	NA	51238836	51240856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342
transcript_32216.known	chr12	+	3664	2	FSM	ENSG00000183283.16	ENST00000552459.2	3664	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACTGCAAGGATTCTT	20	False	NA	NA	False	AATAAA	-43	NA	51238907	51243784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51241117_51242329
transcript_32219.known	chr12	+	2262	15	FSM	ENSG00000050438.17	ENST00000535225.6	2262	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	17.9541649991395	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	19	True	NA	1	True	AATAAA	-15	NA	51391316	51474575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51391489_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_32221.nic	chr12	+	2325	15	ISM	ENSG00000050438.17	ENST00000319957.10	3834	22	-172	23287	-30	0	5prime_fragment	FALSE	canonical	3	59	junction_11	8.09289181684666	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	16	False	NA	1	True	AATAAA	-15	NA	51424800	51474575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_51425036_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_3223.known	chr1	-	721	6	FSM	ENSG00000160055.20	ENST00000344461.7	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	19.3597520645281	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	7	True	NA	-2	True	AATAAA	-16	NA	32222338	32216199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_32240.known	chr12	+	4531	9	FSM	ENSG00000135503.13	ENST00000257963.9	4531	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	4.87179381747627	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTGGTGCCATCTGT	-8	True	NA	12	True	ATTAAA	-16	NA	51951698	51997078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51951835_51975264_51975505_51976326_51976576_51980968_51981200_51983998_51984167_51985191_51985349_51986817_51986943_51991862_51991994_51993984
transcript_32248.known	chr12	+	2485	7	FSM	ENSG00000123358.20	ENST00000394825.6	2485	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	41.1599184752459	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	-2	True	NA	10	True	AATAAA	-21	NA	52051441	52059503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52051569_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_32251.known	chr12	+	1433	4	FSM	ENSG00000123395.15	ENST00000336854.9	1433	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	71.0039122552804	2650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCTCCCTTGTCTTG	-21	True	NA	22	True	AATAAA	-25	NA	52069977	52077495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52070243_52070353_52070484_52073574_52073903_52076785
transcript_32253.known	chr12	+	658	4	FSM	ENSG00000123395.15	ENST00000548915.1	658	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	204.532529333491	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGTGGGTGAGAAACT	21	True	NA	NA	False	NA	NA	NA	52070019	52076956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52070049_52070353_52070484_52073574_52073903_52076785
transcript_32257.nnic	chr12	+	1395	9	NIC	ENSG00000135480.17	novel	586	4	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	14.1901153976985	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTGGTATCCTGGCTT	NA	False	NA	18	True	AATAAA	-31	NA	52232643	52248921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_52232792_52235154_52235367_52237508_52237570_52238679_52238776_52241471_52241637_52243011_52243138_52245411_52245633_52248176_52248212_52248590
transcript_32258.known	chr12	+	1625	9	FSM	ENSG00000135480.17	ENST00000331817.6	1625	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	4.49826355386165	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTGGTATCCTGGCTT	-2	True	NA	18	True	AATAAA	-31	NA	52233242	52248921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52233621_52235154_52235367_52237508_52237570_52238679_52238776_52241471_52241637_52243011_52243138_52245411_52245633_52248176_52248212_52248590
transcript_32259.nic	chr12	+	1118	7	ISM	ENSG00000135480.17	ENST00000331817.6	1625	9	4183	0	-1262	0	3prime_fragment	FALSE	canonical	3	39	junction_2	4.04145188432738	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCTGGTATCCTGGCTT	2113	False	NA	18	True	AATAAA	-31	NA	52237425	52248921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_52237570_52238679_52238776_52241471_52241637_52243011_52243138_52245411_52245633_52248176_52248212_52248590
transcript_3227.known	chr1	-	972	5	FSM	ENSG00000160055.20	ENST00000487174.1	972	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	23.9217474278114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGCTACCTCATGGA	26	False	NA	NA	False	NA	NA	NA	32222319	32216729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866
transcript_32280.known	chr12	-	2126	9	FSM	ENSG00000170421.13	ENST00000552551.5	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	1326.73497259249	10191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTGTGTGCATCTG	-10	True	NA	-4	True	AATAAA	-25	NA	52949842	52897186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949455
transcript_32286.known	chr12	+	1420	8	FSM	ENSG00000111057.11	ENST00000388837.6	1420	8	0	0	0	0	multi-exon	FALSE	canonical	1	690	junction_1	2432.89275202528	3548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATGTCACTTTGTCTT	-5	True	NA	14	True	AATAAA	-14	NA	52948870	52952900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52948939_52949172_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_3229.known	chr1	-	1107	5	FSM	ENSG00000160055.20	ENST00000309777.11	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	16.0390149323454	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-8	True	NA	-2	True	AATAAA	-16	NA	32222353	32216199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_32290.known	chr12	+	1413	7	FSM	ENSG00000111057.11	ENST00000388835.4	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	2012	junction_3	1748.34376387101	9938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTTGTCTTCTTTTG	-1	True	NA	20	True	AATAAA	-20	NA	52949117	52952906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_32302.known	chr12	+	1696	7	FSM	ENSG00000111057.11	ENST00000550600.5	1696	7	0	0	0	0	multi-exon	FALSE	canonical	1	690	junction_1	2466.1546315401	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATGACACCAAAGTTCT	10	True	NA	-74	True	NA	NA	NA	52948885	52952812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52948939_52949172_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118
transcript_32316.known	chr12	-	507	3	FSM	ENSG00000170421.13	ENST00000551318.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	52	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATGGTGCACGCCTGT	935	False	NA	-13	True	AATACA	-14	NA	52949920	52948650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52948829_52949455_52949579_52949714
transcript_32317.known	chr12	-	2437	3	FSM	ENSG00000170421.13	ENST00000619952.2	2437	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	3.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGTACTGCCTTTTACT	6	True	NA	NA	False	AATAAA	-18	NA	52949874	52946613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52948829_52949455_52949518_52949714
transcript_32322.known	chr12	-	2902	11	FSM	ENSG00000167778.9	ENST00000301463.9	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	6.8381283989115	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGATCCTACTCTGA	-11	True	NA	-1	True	AATAGA	-18	NA	53079390	53064315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53065967_53066313_53066487_53066572_53066693_53067647_53067706_53068154_53068305_53073285_53073472_53074648_53074785_53075094_53075220_53075735_53075812_53077114_53077262_53079310
transcript_3233.known	chr1	-	1411	4	FSM	ENSG00000160055.20	ENST00000373593.5	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.34846922834953	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTAGTAAGTATTCTTT	2	True	NA	1	True	AATAAA	-19	NA	32222343	32216196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32217352_32221130_32221198_32221866_32222019_32222306
transcript_32330.known	chr12	-	1645	5	FSM	ENSG00000257337.8	ENST00000657514.2	1750	5	92	13	31	0	multi-exon	FALSE	canonical	2	5	junction_1	10.0591997693654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACGCTCTGTAG	76	False	NA	-28	True	AAAAAG	-44	NA	53054353	53038985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53053395_53053575_53054320
transcript_32332.known	chr12	-	1563	4	FSM	ENSG00000257337.8	ENST00000662901.2	1591	4	0	28	0	0	multi-exon	FALSE	canonical	1	3	junction_3	13.6950923894494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACGCTCTGTAG	-21	True	NA	-28	True	AAAAAG	-44	NA	53054450	53038985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53054320
transcript_32334.known	chr12	-	2863	4	FSM	ENSG00000257337.8	ENST00000546793.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.96655480858378	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTATTTTTATGTTCC	-9	True	NA	NA	False	CATAAA	-16	NA	53054438	53043188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53045654_53045960_53046062_53053395_53053575_53054320
transcript_32339.known	chr12	+	1936	15	FSM	ENSG00000063046.18	ENST00000420463.7	1936	15	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_10	366.317728988686	5071	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAACCTCTATCCAG	16	True	NA	-90	True	NA	NA	NA	53006455	53040280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034725_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_32340.known	chr12	-	1854	6	FSM	ENSG00000257337.8	ENST00000668380.1	1854	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.1753850041795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAGTGACCTTGGTTAA	2	True	NA	-15	True	AATAAA	-12	NA	53054427	53038972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53040264_53045064_53045187_53045599_53045654_53045960_53046062_53053395_53053575_53054320
transcript_32344.known	chr12	+	947	4	FSM	ENSG00000167779.9	ENST00000301464.4	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	9.46337971105226	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	1	True	NA	26	True	AATAAA	-16	NA	53097666	53102340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53098052_53100711_53100858_53101040_53101161_53102044
transcript_32348.nnic	chr12	+	804	4	NNC	ENSG00000167779.9	novel	1177	4	NA	NA	413	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	107.483332041143	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	115	False	NA	26	True	AATAAA	-16	NA	53098079	53102340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_53098322_53100711_53100858_53101040_53101161_53102044
transcript_32350.known	chr12	+	597	4	FSM	ENSG00000167779.9	ENST00000549628.1	597	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.254463081512	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	62	False	NA	26	True	AATAAA	-16	NA	53098923	53102340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53098959_53100711_53100858_53101040_53101161_53102044
transcript_32354.nic	chr12	-	400	2	ISM	ENSG00000139631.20	ENST00000267085.8	2645	17	-73	22053	-23	-6447	5prime_fragment	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTATGATGAAAAAAAGAC	678	False	NA	NA	False	AAGAAA	-8	NA	53180669	53179715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_53180013_53180566
transcript_32355.nic	chr12	-	382	2	ISM	ENSG00000139631.20	ENST00000453446.6	1774	16	-40	21206	-40	-6448	5prime_fragment	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGTATGATGAAAAAAAGA	661	False	NA	NA	False	AAGAAA	-7	NA	53180686	53179716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_53180013_53180600
transcript_32358.known	chr12	-	2917	10	FSM	ENSG00000172819.17	ENST00000425354.7	2917	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_9	97.2028552138691	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-4	True	NA	-4	True	AATAAA	-15	NA	53232209	53210568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231973
transcript_32361.known	chr12	-	1836	8	FSM	ENSG00000172819.17	ENST00000338561.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_7	50.13084919305	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGCTCTCTGAGAG	-10	True	NA	NA	False	NA	NA	NA	53220259	53211330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
transcript_32362.known	chr12	-	1620	8	FSM	ENSG00000172819.17	ENST00000543762.5	1620	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	116.245693358893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCAGCACTGCCCCA	NA	False	NA	NA	False	NA	NA	NA	53232232	53211413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53231168_53231236_53231973
transcript_32364.known	chr12	-	944	4	FSM	ENSG00000172819.17	ENST00000550362.5	944	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	25.3026129524645	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATCTGGCTACCCAGGG	NA	False	NA	NA	False	NA	NA	NA	53232980	53227499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53227688_53231168_53231236_53231973_53232193_53232510
transcript_32367.known	chr12	+	1763	2	FSM	ENSG00000182544.9	ENST00000329548.5	1763	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGATTTACTCATCC	-5	True	NA	15	True	AATAAA	-17	NA	53252094	53254406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53252269_53252817
transcript_32368.known	chr12	+	427	2	FSM	ENSG00000182544.9	ENST00000552097.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACTTTGTGCTGCTAG	248	False	NA	NA	False	NA	NA	NA	53252448	53253209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53252484_53252817
transcript_3237.known	chr1	-	1169	4	FSM	ENSG00000220785.8	ENST00000403496.7	1172	4	0	3	0	0	multi-exon	FALSE	canonical	3	28	junction_2	9.89949493661167	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	1285	False	NA	-2	True	AATAAA	-18	NA	32240422	32231659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32231970_32232041_32232185_32234951_32235114_32239868
transcript_32373.known	chr12	+	559	5	FSM	ENSG00000123349.15	ENST00000547130.6	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1696.40045390232	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-9	True	NA	31	True	AATAAA	-19	NA	53295541	53299450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298044_53298151_53299268
transcript_32374.known	chr12	+	1848	10	FSM	ENSG00000288663.1	ENST00000676527.1	1848	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	1523.70108212022	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	2798	False	NA	13	True	AATAAA	-14	NA	53295491	53307171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296218_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_32376.known	chr12	+	528	5	FSM	ENSG00000123349.15	ENST00000628881.2	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1509.53691160568	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	2815	False	NA	33	True	AATAAA	-21	NA	53295508	53299452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_32378.known	chr12	+	595	5	FSM	ENSG00000123349.15	ENST00000550880.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1695.89040035021	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGGTCTTTTCTT	2831	False	NA	26	True	AATAAA	-14	NA	53295524	53299445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296429_53296552_53297849_53297925_53298044_53298151_53299268
transcript_32379.known	chr12	+	840	5	FSM	ENSG00000139637.14	ENST00000549488.5	840	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	179.828390417086	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	62	False	NA	19	True	AATAAA	-20	NA	53300092	53307177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_32383.known	chr12	+	478	4	FSM	ENSG00000123349.15	ENST00000351500.7	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	1369.65275404632	4056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	2831	False	NA	31	True	AATAAA	-19	NA	53295524	53299450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53297849_53297925_53298044_53298151_53299268
transcript_32388.known	chr12	+	392	3	FSM	ENSG00000123349.15	ENST00000550846.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1643	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-15	True	NA	31	True	AATAAA	-19	NA	53295535	53299450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53298044_53298151_53299268
transcript_32391.known	chr12	-	647	2	FSM	ENSG00000257605.3	ENST00000550263.3	697	2	50	0	50	0	multi-exon	FALSE	canonical	1	2	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGATGGGGAAAGATTTT	44	False	NA	NA	False	ATTAAA	-23	NA	53300314	53298654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53299130_53300142
transcript_32392.known	chr12	+	635	6	FSM	ENSG00000123349.15	ENST00000549759.2	635	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_2	1643.95279737589	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGGTCTTTTCTTGG	2812	False	NA	28	True	AATAAA	-16	NA	53295505	53299447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53295942_53296429_53296468_53297849_53297925_53298044_53298151_53299268
transcript_32393.known	chr12	+	946	5	FSM	ENSG00000123349.15	ENST00000550069.2	946	5	0	0	0	0	multi-exon	TRUE	canonical	2	125	junction_3	1419.76635401745	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGAATGTTGGTCT	2785	False	NA	20	True	AATAAA	-8	NA	53295478	53299439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298048_53298151_53299268
transcript_32394.known	chr12	+	640	6	FSM	ENSG00000123349.15	ENST00000676468.1	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1372.78948131168	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	2831	False	NA	33	True	AATAAA	-21	NA	53295524	53299452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53295942_53296218_53296276_53297849_53297925_53298044_53298151_53299268
transcript_32395.known	chr12	+	564	5	FSM	ENSG00000123349.15	ENST00000243040.10	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	1439.8522493645	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	-9	True	NA	31	True	AATAAA	-19	NA	53295541	53299450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53295942_53297849_53297925_53298044_53298151_53299268
transcript_32396.known	chr12	+	631	3	FSM	ENSG00000123349.15	ENST00000677326.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	1396	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	2798	False	NA	31	True	AATAAA	-19	NA	53295491	53299450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53297849_53298151_53299268
transcript_32397.known	chr12	+	1980	5	FSM	ENSG00000123349.15	ENST00000552341.5	1980	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1457.55726731405	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTTGGTCTTTTCTTG	-9	True	NA	27	True	AATAAA	-15	NA	53295541	53299446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53295942_53296429_53297925_53298044_53298151_53299268
transcript_32398.known	chr12	+	1202	7	FSM	ENSG00000139637.14	ENST00000267103.10	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	22.5788740984921	3025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	-23	True	NA	19	True	AATAAA	-20	NA	53299694	53307177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_32399.known	chr12	+	988	6	FSM	ENSG00000139637.14	ENST00000548632.5	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	160.030747045685	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	32	True	NA	13	True	AATAAA	-14	NA	53299749	53307171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53306197_53306321_53306679_53306862_53306965
transcript_32400.known	chr12	+	1369	6	FSM	ENSG00000139637.14	ENST00000548845.5	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_4	13.0935098426663	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	0	True	NA	13	True	AATAAA	-14	NA	53299717	53307171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_32401.known	chr12	+	571	5	FSM	ENSG00000123349.15	ENST00000552742.6	571	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1428.1521277511	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	5	True	NA	31	True	AATAAA	-19	NA	53295555	53299450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298018_53298151_53299268
transcript_32402.known	chr12	+	541	2	FSM	ENSG00000123349.15	ENST00000548984.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	3333	junction_1	0	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTTGGTCTTTTCTTG	1563	False	NA	27	True	AATAAA	-15	NA	53297787	53299446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53298151_53299268
transcript_32409.known	chr12	-	1815	16	FSM	ENSG00000094914.14	ENST00000209873.9	1815	16	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_15	51.3477901720761	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-25	True	NA	-8	True	AATAAA	-23	NA	53321610	53307459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_32410.known	chr12	-	1703	15	FSM	ENSG00000094914.14	ENST00000394384.7	1703	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	104.591845196615	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTACCAGTCTGTCTTT	-11	True	NA	-7	True	AATAAA	-24	NA	53321596	53307458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_32411.known	chr12	-	1606	16	FSM	ENSG00000094914.14	ENST00000549450.6	1606	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	103.752568910633	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTACCAGTCTGTCTTTT	20	True	NA	-6	True	AATAAA	-25	NA	53321257	53307457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321200
transcript_32412.known	chr12	-	2101	15	FSM	ENSG00000094914.14	ENST00000672797.1	2101	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	99.9603237616336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCACTCCCCACATTCC	9	True	NA	-66	True	NA	NA	NA	53321268	53307517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308852_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564
transcript_32415.known	chr12	+	7680	6	FSM	ENSG00000185591.10	ENST00000327443.9	7680	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	37.5158633114047	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTCTGGTGTATTGA	-9	True	NA	NA	False	AATAAA	-4	NA	53380175	53416446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53380299_53381658_53381814_53382109_53383623_53406584_53406754_53409361_53409562_53410926
transcript_32416.known	chr12	+	1787	11	FSM	ENSG00000135409.11	ENST00000550311.5	1787	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	14.3721953785773	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCAGTTTATGTGTCAT	6	True	NA	-40	True	NA	NA	NA	53423865	53431473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53423984_53424287_53424471_53424708_53424901_53425164_53425243_53425454_53425574_53425688_53425920_53428895_53429011_53429452_53429626_53429830_53429979_53430149_53430283_53431176
transcript_32419.known	chr12	+	1437	9	FSM	ENSG00000135409.11	ENST00000379791.7	1437	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.4173289828595	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCAGTTTATGTGTCAT	75	False	NA	-40	True	NA	NA	NA	53423934	53431473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53423984_53424287_53424471_53424708_53424901_53425164_53425243_53425454_53425574_53425688_53425920_53428895_53429011_53429452_53429626_53431176
transcript_3242.known	chr1	-	737	3	FSM	ENSG00000160055.20	ENST00000484490.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	35.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTCTATTAGCCTTG	-14	True	NA	NA	False	NA	NA	NA	32222359	32216356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216948_32217258_32217352_32222306
transcript_32422.nic	chr12	+	1304	8	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-27	54	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	13.0102000800314	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1189	False	NA	14	True	CATAAA	-14	NA	53425048	53431527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53429830_53429979_53430145_53430283_53431176
transcript_32430.nnic	chr12	+	1156	7	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-27	54	combination_of_known_splicesites	FALSE	canonical	2	3	junction_5	12.6315302143309	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1189	False	NA	14	True	CATAAA	-14	NA	53425048	53431527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53430145_53430283_53431176
transcript_32432.nnic	chr12	+	1026	7	NNC	ENSG00000135409.11	novel	887	7	NA	NA	-27	54	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	15.3803626600791	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1189	False	NA	14	True	CATAAA	-14	NA	53425048	53431527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_53425165_53425454_53425488_53425818_53425920_53428895_53429011_53429452_53429626_53430145_53430283_53431176
transcript_32436.nic	chr12	+	1019	6	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-27	54	combination_of_known_junctions	FALSE	canonical	3	17	junction_5	8.89044430835715	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1189	False	NA	14	True	CATAAA	-14	NA	53425048	53431527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429626_53431176
transcript_32437.nnic	chr12	+	1037	6	NNC	ENSG00000135409.11	novel	887	7	NA	NA	-27	52	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	13.0843417870369	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGCTGTCTTGTCTGCCT	1189	False	NA	12	True	CATAAA	-12	NA	53425048	53431525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_53425165_53425454_53425488_53425688_53425920_53428895_53429011_53429452_53429646_53431176
transcript_3244.known	chr1	+	1250	10	FSM	ENSG00000084623.12	ENST00000677353.1	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	532.259288897135	2779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	7	False	NA	33	True	AATAAA	-34	NA	32222427	32231604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_32441.nnic	chr12	+	889	6	NNC	ENSG00000135409.11	novel	887	7	NA	NA	-27	54	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	13.9713993572584	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1189	False	NA	14	True	CATAAA	-14	NA	53425048	53431527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_53425165_53425454_53425488_53425818_53425920_53428895_53429011_53429452_53429626_53431176
transcript_32442.nic	chr12	+	1105	6	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-27	54	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	11.3560556532627	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1189	False	NA	14	True	CATAAA	-14	NA	53425048	53431527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53425165_53425454_53425574_53425688_53425920_53428895_53429011_53429452_53429626_53431176
transcript_32449.nic	chr12	+	904	5	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-27	54	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	9.03811374126261	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1189	False	NA	14	True	CATAAA	-14	NA	53425048	53431527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53425165_53425454_53425488_53425688_53425920_53429452_53429626_53431176
transcript_3245.known	chr1	+	858	9	FSM	ENSG00000084623.12	ENST00000355082.10	858	9	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	240.306444982235	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTTTGT	12	False	NA	NA	False	ATTAAA	-16	NA	32222432	32229254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134
transcript_32455.nic	chr12	+	1220	5	NIC	ENSG00000135409.11	novel	887	7	NA	NA	-27	54	intron_retention	FALSE	canonical	3	17	junction_4	9.63068014212911	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCTTGTCTGCCTCA	1189	False	NA	14	True	CATAAA	-14	NA	53425048	53431527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53425165_53425454_53425920_53428895_53429011_53429452_53429626_53431176
transcript_3246.known	chr1	+	1276	11	FSM	ENSG00000084623.12	ENST00000678689.1	1276	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	494.944895922768	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231259
transcript_3247.known	chr1	+	1256	10	FSM	ENSG00000084623.12	ENST00000678968.1	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	534.424393248255	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	3	True	NA	33	True	AATAAA	-34	NA	32222406	32231604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_32470.known	chr12	-	4319	15	FSM	ENSG00000139625.13	ENST00000267079.6	4319	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	25.0542269031452	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	7907	False	NA	NA	False	NA	NA	NA	53499615	53479668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487156_53487254_53487429_53499426
transcript_32477.known	chr12	-	4261	14	FSM	ENSG00000139625.13	ENST00000547488.6	4261	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	21.4600220032203	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	11	True	NA	NA	False	NA	NA	NA	53499458	53479668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487429_53499426
transcript_3248.known	chr1	+	1141	9	FSM	ENSG00000084623.12	ENST00000677640.1	1141	9	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	527.063800692098	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_3249.known	chr1	+	1416	11	FSM	ENSG00000084623.12	ENST00000677378.1	1416	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	486.799640509317	2616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222540_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_32496.known	chr12	+	688	4	FSM	ENSG00000205352.11	ENST00000547368.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_1	945.241532919262	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGAGGATTGCCATGG	-8	True	NA	-92	True	NA	NA	NA	53441755	53446218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441818_53442694_53442734_53443390_53443774_53446014
transcript_3250.known	chr1	+	1343	10	FSM	ENSG00000084623.12	ENST00000677767.1	1343	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	524.249516504837	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTTGTGGTGTCTGTT	3	True	NA	29	True	AATAAA	-30	NA	32222406	32231600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32230926_32231020_32231114
transcript_32500.known	chr12	+	1105	4	FSM	ENSG00000205352.11	ENST00000429243.7	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	1521	junction_1	282.673348977618	12732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	-3	True	NA	36	True	AATAAA	-20	NA	53441733	53446638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443390_53443774_53446014
transcript_32501.known	chr12	+	810	4	FSM	ENSG00000205352.11	ENST00000546581.5	810	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	821.760846529505	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATCACCTTGGCTGG	11	True	NA	43	True	AATAAA	-27	NA	53441747	53446645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443678_53443774_53446014
transcript_32502.known	chr12	+	1009	4	FSM	ENSG00000205352.11	ENST00000551003.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	817.168417293658	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACCTGTGCTATCAC	-5	True	NA	34	True	AATAAA	-18	NA	53441731	53446636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443486_53443774_53446014
transcript_32503.known	chr12	+	927	4	FSM	ENSG00000205352.11	ENST00000379786.8	927	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	816.250097839028	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	-2	True	NA	36	True	AATAAA	-20	NA	53441761	53446638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443540_53443774_53446014
transcript_32504.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549068.5	755	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	840.144035270143	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCAGGCCTTTTGTTG	8	True	NA	-51	True	AATACA	-3	NA	53441744	53446475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443566_53443774_53446014
transcript_32505.known	chr12	+	1730	14	FSM	ENSG00000197111.16	ENST00000359282.9	1730	14	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	213.759556345428	6447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGATTCATGTGGGTTT	-1	True	NA	45	True	ATTAAA	-44	NA	53452101	53479826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_32506.known	chr12	+	1342	15	FSM	ENSG00000197111.16	ENST00000552296.6	1342	15	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	229.199683459553	1904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	265	False	NA	35	True	ATTAAA	-16	NA	53452367	53479614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
transcript_32507.known	chr12	+	1418	12	FSM	ENSG00000197111.16	ENST00000552819.5	1418	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	285.763671646796	5625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGATTCATGTGGGT	-1	True	NA	43	True	ATTAAA	-42	NA	53454733	53479824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_32508.known	chr12	+	1202	13	FSM	ENSG00000197111.16	ENST00000548933.5	1202	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	260.241914699894	1935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTGTTGATGCTGAGA	3	True	NA	41	True	ATTAAA	-22	NA	53454784	53479620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_32509.known	chr12	+	1296	14	FSM	ENSG00000197111.16	ENST00000439930.7	1296	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	269.723636777881	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGCTGTTGATGCTGA	-3	True	NA	39	True	ATTAAA	-20	NA	53454778	53479618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
transcript_3251.known	chr1	+	987	7	FSM	ENSG00000084623.12	ENST00000679290.1	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	589.200211209135	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	3	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_32510.known	chr12	+	1786	8	FSM	ENSG00000197111.16	ENST00000553064.6	1786	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	245.040771284774	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATTATGCCTCTTTCT	853	False	NA	NA	False	AATAAA	-32	NA	53461014	53476070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53461144_53462492_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53474868
transcript_32514.nic	chr12	+	2001	9	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	126.015810020013	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	NA	False	NA	22	True	AATAAA	-24	NA	53500877	53506431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_32516.known	chr12	+	1510	9	FSM	ENSG00000139546.11	ENST00000266987.7	1510	9	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	46.0365004643055	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-31	True	NA	22	True	AATAAA	-24	NA	53501282	53506431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_3252.known	chr1	+	1400	10	FSM	ENSG00000084623.12	ENST00000678883.1	1400	10	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	240.608231338112	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTGGATCTCCAACCA	3	True	NA	-66	True	AAAAAG	-2	NA	32222423	32231505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926
transcript_32524.known	chr12	+	1514	9	FSM	ENSG00000139546.11	ENST00000549572.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	148.814849309469	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAAGCCCTTCTCTTC	2	True	NA	14	True	AATAAA	-16	NA	53501603	53506423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_32525.known	chr12	+	1402	9	FSM	ENSG00000139546.11	ENST00000394357.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	110.236606329295	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTGGATTTTTAAG	17	True	NA	3	True	AATAAA	-5	NA	53501618	53506412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_32527.known	chr12	+	1466	9	FSM	ENSG00000139546.11	ENST00000549679.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	156.967353293607	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	3	True	NA	-13	True	AATGAA	-22	NA	53501604	53506396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503213_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_3253.known	chr1	+	1482	10	FSM	ENSG00000084623.12	ENST00000471486.6	1482	10	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_6	148.507222254436	2745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	16	False	NA	31	True	AATAAA	-32	NA	32222436	32231602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_32530.nic	chr12	+	1389	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_6	131.909523723572	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-38	True	NA	22	True	AATAAA	-24	NA	53501275	53506431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_3254.known	chr1	+	1443	11	FSM	ENSG00000084623.12	ENST00000676554.1	1443	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	509.525426254667	2770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	3	True	NA	33	True	AATAAA	-34	NA	32222406	32231604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226148_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_32545.nic	chr12	+	1345	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	122.294725969684	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-36	True	NA	22	True	AATAAA	-24	NA	53501277	53506431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53501462_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_3255.known	chr1	+	1305	10	FSM	ENSG00000084623.12	ENST00000678162.1	1305	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	504.553879465762	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGATATTTTGTGG	-3	True	NA	21	True	AATAAA	-22	NA	32222417	32231592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_32556.nic	chr12	+	1288	8	NIC	ENSG00000139546.11	novel	1402	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	31	junction_1	134.605091331067	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	-20	True	NA	22	True	AATAAA	-24	NA	53501581	53506431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53501709_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_3256.known	chr1	+	1434	9	FSM	ENSG00000084623.12	ENST00000677540.1	1434	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	537.215040742532	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	9	True	NA	31	True	AATAAA	-32	NA	32222412	32231602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32230926
transcript_3257.known	chr1	+	1503	10	FSM	ENSG00000084623.12	ENST00000677676.1	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	248.583294533216	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	1	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_32578.known	chr12	+	916	6	FSM	ENSG00000139546.11	ENST00000552857.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	198.305824422784	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCTGTGGGTGCCATC	-40	True	NA	NA	False	NA	NA	NA	53501273	53506229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501462_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_3259.known	chr1	+	2099	13	FSM	ENSG00000182866.17	ENST00000619559.4	2099	13	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_1	12.8376616077678	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	NA	False	NA	17	True	AATAAA	-21	NA	32274110	32286164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_32593.known	chr12	-	1609	13	FSM	ENSG00000267281.3	ENST00000591834.1	1609	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	47.7281072558112	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCCATGTGTGTCTGTGT	17	True	NA	-6	True	AATAAA	-15	NA	53625979	53506690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53506894_53507020_53507143_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53625950
transcript_32594.known	chr12	-	440	3	FSM	ENSG00000139574.9	ENST00000267017.4	440	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGTCTGTGTGAG	-1	True	NA	-3	True	AATAAA	-18	NA	53507484	53506687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53506894_53507020_53507143_53507372
transcript_32595.known	chr12	-	670	2	FSM	ENSG00000139574.9	ENST00000448979.4	670	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGTCTGTGTGAG	-1	True	NA	-3	True	AATAAA	-18	NA	53507484	53506687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53506894_53507020
transcript_32597.known	chr12	-	774	4	FSM	ENSG00000170653.19	ENST00000548118.6	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	64.8553947040816	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	0	True	NA	-2	True	AATAAA	-21	NA	53625996	53542886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53625950
transcript_32599.known	chr12	-	6660	12	FSM	ENSG00000170653.19	ENST00000420353.7	6660	12	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_8	42.1047493444074	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTCTGATGCTTCACT	-15	True	NA	-3	True	ATTAAA	-18	NA	53626382	53512053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53626278
transcript_3260.known	chr1	+	2166	13	FSM	ENSG00000182866.17	ENST00000333070.4	2166	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	48.0199611272923	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATCTCTTTGCTGTCCA	10	False	NA	15	True	AATAAA	-19	NA	32274131	32286162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279580_32279748_32279840_32279995_32280078_32280211_32285513
transcript_32600.known	chr12	-	860	4	FSM	ENSG00000170653.19	ENST00000591397.1	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	20.0055547841649	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-43	True	NA	-2	True	AATAAA	-21	NA	53626410	53542886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53626278
transcript_32628.known	chr12	-	632	5	FSM	ENSG00000135390.21	ENST00000394349.9	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	3190	junction_4	636.61703558733	61694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	10	True	NA	-9	True	AATAAA	-17	NA	53676083	53665169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
transcript_32629.known	chr12	-	728	5	FSM	ENSG00000135390.21	ENST00000549748.2	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	1899.92702162478	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTGGGGAACGTGGTT	11	True	NA	-36	True	NA	NA	NA	53676082	53665238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53665429_53669147_53669342_53669870_53670115_53672575_53672646_53676052
transcript_32630.known	chr12	-	5576	15	FSM	ENSG00000012822.16	ENST00000550804.6	5576	15	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	12.9638429676464	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGCCATGTGTTGCTT	-2	True	NA	NA	False	AATAAA	-20	NA	53727452	53708516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53712122_53713099_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_32631.known	chr12	-	3888	14	FSM	ENSG00000012822.16	ENST00000548263.5	3888	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	12.563683928138	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTTTGTAGTTTGAACA	56	False	NA	-54	True	AATAAA	-19	NA	53727428	53711158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_32633.known	chr12	-	733	2	FSM	ENSG00000012822.16	ENST00000546774.1	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGGCTCAGAAACATTAA	-2	True	NA	NA	False	NA	NA	NA	53727452	53724582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53725267_53727403
transcript_32637.known	chr12	+	550	2	FSM	ENSG00000180818.5	ENST00000514415.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGATGGGGGTGGGAGT	2	True	NA	NA	False	NA	NA	NA	53986337	53989675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53986381_53989168
transcript_32638.known	chr12	-	290	2	FSM	ENSG00000250451.5	ENST00000512427.5	290	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATTGTTCATAAATGTA	1089	False	NA	NA	False	AATAAA	-17	NA	53999620	53999021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53999268_53999576
transcript_32640.known	chr12	-	2119	6	FSM	ENSG00000123415.16	ENST00000513838.5	2119	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	82.7357238440566	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	158	False	NA	-1	True	AATAAA	-29	NA	54188957	54180357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188510_54188597_54188725
transcript_32643.known	chr12	-	484	5	FSM	ENSG00000123415.16	ENST00000635234.1	484	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.76313972081441	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGTGTTTTGGGGCC	-2	True	NA	NA	False	AATAAA	-16	NA	54188983	54121276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54121456_54165373_54165479_54172024_54172110_54188514_54188597_54188950
transcript_32647.known	chr12	-	926	5	FSM	ENSG00000123415.16	ENST00000514685.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	80.6113360514512	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	175	False	NA	-16	True	AATAAA	-34	NA	54188940	54181452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188720
transcript_3265.known	chr1	+	2118	14	FSM	ENSG00000116478.12	ENST00000373548.8	2118	14	0	0	0	0	multi-exon	TRUE	canonical	3	1052	junction_6	72.876567446884	3259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGAGCTTGTTTCCT	-7	True	NA	25	True	AATAAA	-17	NA	32292082	32333626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32292219_32302620_32302734_32316664_32316783_32324478_32324554_32326938_32327078_32327535_32327678_32329067_32329161_32330577_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
transcript_32664.known	chr12	-	465	4	FSM	ENSG00000123415.16	ENST00000507904.5	465	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	103.964737611686	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTGGGGCCTGTGCT	-9	True	NA	NA	False	NA	NA	NA	54188990	54182584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54182624_54183655_54183960_54188514_54188597_54188950
transcript_32666.known	chr12	+	1369	2	FSM	ENSG00000250742.5	ENST00000508564.1	1369	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTCGGAGTCAGCTG	36	False	NA	NA	False	AATAAA	-16	NA	54126097	54132843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54126613_54131989
transcript_32667.known	chr12	-	561	2	FSM	ENSG00000123415.16	ENST00000511522.5	561	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGCCCTTGGGGCCTTGC	-4	True	NA	NA	False	GGGGCT	-21	NA	54188985	54182097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54182624_54188950
transcript_32668.known	chr12	-	627	4	FSM	ENSG00000123415.16	ENST00000243112.9	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	73.8120736886739	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCTCATCTGTAAAACA	5	True	NA	-34	True	AATAAA	-16	NA	54188976	54181470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54188950
transcript_32669.known	chr12	-	1571	4	FSM	ENSG00000123415.16	ENST00000337581.7	1571	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	82.192186706253	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATCTGTAAAACAGGG	7	True	NA	-31	True	AATAAA	-19	NA	54188974	54181467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54182624_54183655_54183960_54187818_54187906_54188950
transcript_32674.known	chr12	+	2067	10	FSM	ENSG00000135486.19	ENST00000678077.1	2067	10	0	0	0	0	multi-exon	FALSE	canonical	1	50	junction_1	4639.42467165387	79548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGAATGAAATGACAACT	37	False	NA	7	True	AATAAA	-12	NA	54280871	54285239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54281296_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_32682.known	chr12	+	1232	9	FSM	ENSG00000111481.10	ENST00000549043.5	1232	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	407.95907806421	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGGACAACATGGAAG	-8	True	NA	NA	False	NA	NA	NA	54325128	54351102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54325182_54340462_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_32717.known	chr12	-	894	5	FSM	ENSG00000094916.16	ENST00000550411.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	169.322916346252	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGGATGGTCTCTGTC	35	True	NA	NA	False	AAGAAA	-15	NA	54259545	54241754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259269
transcript_32718.known	chr12	-	1832	5	FSM	ENSG00000094916.16	ENST00000439541.6	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	146.289097338113	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTACCACCAAGAGT	-12	True	NA	NA	False	NA	NA	NA	54259592	54240624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
transcript_32728.known	chr12	-	1523	4	FSM	ENSG00000123405.14	ENST00000553070.5	1523	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.0830459735946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCCCAGAGGGGTGGAA	-18	True	NA	NA	False	NA	NA	NA	54301015	54292373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54293382_54295134_54295305_54300146_54300277_54300800
transcript_32729.known	chr12	+	242	3	FSM	ENSG00000135486.19	ENST00000678103.1	242	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	178.5	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	343	False	NA	41	True	AATAAA	-15	NA	54286246	54287087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54286283_54286661_54286733_54286952
transcript_32740.known	chr12	-	1656	3	FSM	ENSG00000123405.14	ENST00000435572.7	1656	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	0.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTCACTGTGTCTTC	-18	True	NA	-5	True	TATAAA	-15	NA	54301015	54292110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54293382_54295134_54295305_54300800
transcript_32741.known	chr12	-	2627	2	FSM	ENSG00000094916.16	ENST00000618078.1	2627	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATTAAACATTTTT	-19	True	NA	NA	False	AATAAA	-29	NA	54280133	54271840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54274342_54280007
transcript_32744.known	chr12	-	11546	5	FSM	ENSG00000094916.16	ENST00000209875.9	11546	5	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_4	39.0600499231632	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGTGGTGGTTTAA	-8	True	NA	-22	True	AATAAA	-20	NA	54280122	54230941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
transcript_32745.known	chr12	+	1890	9	FSM	ENSG00000111481.10	ENST00000262061.7	1890	9	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	171.870409029594	6181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGTTTC	-6	True	NA	14	True	AATAAA	-15	NA	54325130	54351846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_32746.known	chr12	+	2278	10	FSM	ENSG00000135486.19	ENST00000677249.1	2278	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4654.32250974203	78207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	NA	False	NA	38	True	NA	NA	NA	54280690	54285745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282663_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_32747.known	chr12	+	1234	11	FSM	ENSG00000135486.19	ENST00000547566.5	1234	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_9	5555.80178642111	10065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	-1	True	NA	42	True	AATAAA	-16	NA	54280747	54287088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54286661_54286733_54286952
transcript_32748.known	chr12	+	1294	10	FSM	ENSG00000135486.19	ENST00000330752.12	1294	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4654.32250974203	66173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGTGTAAAGTTAGTC	26	False	NA	24	True	AATAAA	-15	NA	54280774	54284881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282670_54282842_54282875_54283811_54283968_54284257_54284318_54284548
transcript_32749.known	chr12	+	2008	10	FSM	ENSG00000135486.19	ENST00000678418.1	2008	10	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_7	5401.87427921042	22710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCTTGAATGAAATGACAA	NA	False	NA	5	True	AATAAA	-10	NA	54280697	54285237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282666_54282799_54282875_54283078_54283235_54283811_54283968_54284257_54284318_54284548
transcript_32750.known	chr12	+	2515	9	FSM	ENSG00000135486.19	ENST00000679228.1	2515	9	0	0	0	0	multi-exon	FALSE	canonical	3	11435	junction_6	1109.34326715179	90175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	0	True	NA	38	True	NA	NA	NA	54280748	54285745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_32751.known	chr12	+	362	3	FSM	ENSG00000135486.19	ENST00000677840.1	362	3	0	0	0	0	multi-exon	FALSE	canonical	2	186	junction_1	85.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	1006	False	NA	41	True	AATAAA	-15	NA	54283811	54287087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54283968_54286661_54286733_54286952
transcript_32752.known	chr12	+	1539	9	FSM	ENSG00000135486.19	ENST00000547276.5	1539	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	4922.14869239035	18390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACTGTATGGATTTGG	31	False	NA	19	True	AATAAA	-24	NA	54280779	54285251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282597_54283826_54283968_54284257_54284318_54284548
transcript_32753.known	chr12	+	925	2	FSM	ENSG00000135486.19	ENST00000551665.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	0	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTTTTTTTTAATA	3	True	NA	5	True	NA	NA	NA	54285906	54287051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54286733_54286952
transcript_32754.known	chr12	+	372	3	FSM	ENSG00000135486.19	ENST00000551803.1	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	174	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	43	False	NA	41	True	AATAAA	-15	NA	54285946	54287087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54286113_54286661_54286733_54286952
transcript_32755.known	chr12	+	880	8	FSM	ENSG00000111481.10	ENST00000455864.6	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	358.973707183381	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	2	True	NA	51	True	NA	NA	NA	54325138	54350913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_32756.known	chr12	+	736	7	FSM	ENSG00000111481.10	ENST00000549116.5	736	7	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_2	447.897836813511	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGTGTTTTCCTCCCT	7	True	NA	17	True	ATTAAA	-16	NA	54325143	54350879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54325182_54340546_54340616_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_32757.known	chr12	+	196	2	FSM	ENSG00000135486.19	ENST00000677666.1	196	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	324	False	NA	42	True	AATAAA	-16	NA	54284257	54287088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54284318_54286952
transcript_32758.known	chr12	+	231	2	FSM	ENSG00000135486.19	ENST00000679063.1	231	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGTATCTATGTAATTT	-6	True	NA	NA	False	NA	NA	NA	54282799	54283967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54282879_54283815
transcript_32759.known	chr12	+	463	4	FSM	ENSG00000135486.19	ENST00000677191.1	463	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6551.85898979993	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAGCACCTTTTTGT	-6	True	NA	28	True	NA	NA	NA	54282799	54284317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54282875_54283062_54283235_54283811_54283968_54284257
transcript_32760.nnic	chr12	+	431	2	NIC	ENSG00000257477.1	novel	454	2	NA	NA	192	7701	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATCCTGGGGGTAACTT	5005	False	NA	NA	False	AATAAA	-23	NA	54428494	54437104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_54428653_54436831
transcript_32761.nnic	chr12	+	489	2	NIC	ENSG00000257477.1	novel	454	2	NA	NA	192	7759	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGATTCATGTCTTACTT	5005	False	NA	NA	False	CATAAA	-11	NA	54428494	54437162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_54428653_54436831
transcript_32762.known	chr12	-	2331	8	FSM	ENSG00000161642.18	ENST00000338010.9	2331	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	17.7338601527803	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCCCCTAGACTCAGAC	16	True	NA	-12	True	AATAAA	-19	NA	54391298	54369139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54391234
transcript_32764.known	chr12	-	4250	30	FSM	ENSG00000161638.11	ENST00000293379.9	4250	30	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_15	17.9534342847248	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGATCTCATGTTACTC	-1	True	NA	-6	True	AATAAA	-35	NA	54419266	54395260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54396377_54397364_54397488_54398596_54398699_54399644_54399759_54399863_54399948_54400845_54400996_54401372_54401479_54401584_54401666_54401775_54401856_54402000_54402094_54402179_54402331_54402982_54403051_54403186_54403325_54403624_54403780_54403910_54403967_54404144_54404247_54404429_54404476_54404702_54404895_54405165_54405375_54405663_54405717_54405869_54405927_54407648_54407693_54407831_54407877_54408109_54408236_54408755_54408802_54408892_54408955_54409231_54409353_54409484_54409598_54411833_54411965_54418980
transcript_32766.known	chr12	-	807	9	FSM	ENSG00000170627.11	ENST00000305879.8	807	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	2.521780125229	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATAGTTTGGTCAAGTA	-14	True	NA	-5	True	AATAAA	-17	NA	54473602	54455956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54465066_54465168_54471232_54471278_54473545
transcript_32767.known	chr12	-	671	8	FSM	ENSG00000170627.11	ENST00000552395.5	671	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.92072118575155	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTAATAGTTTGGTCAA	18	True	NA	-8	True	AATAAA	-14	NA	54473570	54455959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54471232_54471278_54473545
transcript_32768.known	chr12	-	1828	7	FSM	ENSG00000135447.17	ENST00000257905.13	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	25.660713595343	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGCCTGGTCTCCCTTC	-3	True	NA	-12	True	NA	NA	NA	54588659	54579245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54580393_54580943_54581051_54581975_54582132_54582731_54582796_54583210_54583249_54584259_54584321_54588404
transcript_32769.known	chr12	+	485	4	FSM	ENSG00000172551.12	ENST00000308796.11	485	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGGTATTTCTTATG	2	True	NA	NA	False	AATAAA	-19	NA	54854515	54858387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54854641_54855115_54855158_54856769_54856893_54858192
transcript_32776.known	chr12	-	497	3	FSM	ENSG00000258763.5	ENST00000555138.1	497	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGAAATTATGCTGAACTG	NA	False	NA	NA	False	AATAAA	-3	NA	55585471	55434759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55435132_55493090_55493159_55585414
transcript_32777.known	chr12	-	555	4	FSM	ENSG00000258763.5	ENST00000556750.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGCTGAACTGAAAAA	NA	False	NA	NA	False	AATAAA	-8	NA	55585471	55434754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55435132_55476548_55476602_55493090_55493159_55585414
transcript_32791.known	chr12	+	421	3	FSM	ENSG00000135441.8	ENST00000553100.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	516.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGCCTTGAATAAAAC	25	True	NA	-17	True	NA	NA	NA	55716080	55719670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716197_55719090_55719224_55719498
transcript_32792.known	chr12	+	1024	3	FSM	ENSG00000258311.5	ENST00000551946.5	1024	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGGTGTGAGCCACCA	-20	True	NA	NA	False	NA	NA	NA	55716035	55722418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716197_55719090_55719224_55721688
transcript_32798.known	chr12	+	525	3	FSM	ENSG00000135441.8	ENST00000548556.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	490.5	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	40	False	NA	16	True	AATAAA	-16	NA	55716530	55719703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716718_55719090_55719224_55719498
transcript_32799.known	chr12	+	367	3	FSM	ENSG00000258311.5	ENST00000549424.1	367	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCGGGGTCACCCTTG	38	False	NA	NA	False	NA	NA	NA	55716589	55721794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716718_55719090_55719224_55721688
transcript_32802.known	chr12	+	1316	2	FSM	ENSG00000170439.8	ENST00000394252.4	1316	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAGACTGATGGCAGCA	-3	True	NA	16	True	AATAAA	-18	NA	55681735	55684611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55682253_55683812
transcript_32805.known	chr12	-	588	2	FSM	ENSG00000135424.19	ENST00000554359.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTTTATGGTGT	5140	False	NA	NA	False	NA	NA	NA	55707713	55702827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55703179_55707476
transcript_32806.known	chr12	+	1368	3	NNC	ENSG00000170439.8	novel	1316	2	NA	NA	-58	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	12.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACTAGACTGATGGCA	11	False	NA	13	True	AATAAA	-15	NA	55681677	55684608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_55682253_55683812_55684047_55684049
transcript_32807.known	chr12	+	571	4	FSM	ENSG00000135441.8	ENST00000548925.6	562	4	-9	0	-1	0	multi-exon	FALSE	canonical	3	845	junction_1	109.393276250823	8582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	-19	True	NA	16	True	AATAAA	-16	NA	55716036	55719703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55719498
transcript_32808.known	chr12	+	837	4	FSM	ENSG00000135441.8	ENST00000547076.5	837	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	381.811762812806	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	67	False	NA	16	True	AATAAA	-16	NA	55716291	55719703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716718_55716932_55717006_55719090_55719224_55719498
transcript_32809.known	chr12	+	3382	4	FSM	ENSG00000258311.5	ENST00000550412.5	3382	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	456.657420830977	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGACCCCATTTAAGT	-20	True	NA	10	True	AATAAA	-30	NA	55716035	55724703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55721688
transcript_32815.known	chr12	-	981	8	FSM	ENSG00000135404.12	ENST00000420846.7	981	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	1226.82828164868	22719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGATTCCTTCCTTTC	8	True	NA	-2	True	NA	NA	NA	55728650	55725442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728515
transcript_32821.known	chr12	-	870	7	FSM	ENSG00000135404.12	ENST00000550776.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1316.51049706749	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTCATCTGGGGGAG	-7	True	NA	-105	True	NA	NA	NA	55727815	55725545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55727611
transcript_32822.known	chr12	-	779	7	FSM	ENSG00000135404.12	ENST00000546939.5	779	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1316.88172294334	28221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	1775	False	NA	-29	True	ATTAAA	-25	NA	55727900	55725469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55727863
transcript_32829.known	chr12	+	1443	2	FSM	ENSG00000258056.3	ENST00000552576.3	1458	2	10	5	10	-5	multi-exon	FALSE	canonical	1	2	junction_1	0	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGTTTTTCCTCTTTTT	-6	True	NA	30	True	NA	NA	NA	55729103	55730852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55729356_55729661
transcript_32830.known	chr12	-	1233	8	FSM	ENSG00000135404.12	ENST00000549117.5	1233	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	1195.93800603782	5045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCGAAAAGAGATGGT	NA	False	NA	-41	True	ATTAAA	-13	NA	55729707	55725481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55729281
transcript_32831.known	chr12	-	829	8	FSM	ENSG00000135404.12	ENST00000550050.5	829	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1250.78726229132	23770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAATTAAACGGATTA	8	True	NA	-66	True	NA	NA	NA	55729000	55725506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726964_55727150_55727340_55728275_55728353_55728952
transcript_32832.known	chr12	-	949	7	FSM	ENSG00000135404.12	ENST00000552692.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	3351	junction_3	166.505672242386	34333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	1193	False	NA	-29	True	ATTAAA	-25	NA	55728482	55725469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275
transcript_32833.known	chr12	-	648	5	FSM	ENSG00000135404.12	ENST00000548160.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	3351	junction_3	141.870319306048	11559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	0	True	NA	-29	True	ATTAAA	-25	NA	55727059	55725469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889
transcript_32834.known	chr12	-	845	7	FSM	ENSG00000135404.12	ENST00000552164.5	845	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	1310.8570245793	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGATAACCCTGAGCAG	698	False	NA	52	True	NA	NA	NA	55728977	55725811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728795
transcript_32835.known	chr12	-	621	6	FSM	ENSG00000135404.12	ENST00000552067.5	621	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1415.39953370064	12947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATGCTTGATTCCTTC	2547	False	NA	-7	True	NA	NA	NA	55727128	55725447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726964_55727081
transcript_32849.known	chr12	-	3236	9	FSM	ENSG00000123342.16	ENST00000322569.9	3236	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.61904085496962	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGGCGTCTG	0	True	NA	NA	False	AATAAA	-17	NA	55842936	55835432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55837375_55837554_55837683_55837842_55838008_55838605_55838735_55839495_55839742_55840666_55840883_55841105_55841237_55842352_55842439_55842743
transcript_32864.known	chr12	+	1258	4	FSM	ENSG00000135414.10	ENST00000546799.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	13.0639452948436	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGTCCTTTTCCTTG	92	False	NA	2	True	AATAAA	-15	NA	55743398	55757127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55743762_55748585_55748984_55749501_55749884_55757012
transcript_32866.known	chr12	+	760	4	FSM	ENSG00000123353.10	ENST00000552672.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	166.745981127649	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTTTTGCTGTGTATT	-13	True	NA	28	True	NA	NA	NA	55818040	55820712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55818113_55819090_55819174_55819341_55819494_55820259
transcript_32868.known	chr12	+	671	4	FSM	ENSG00000123353.10	ENST00000548974.1	671	4	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	164.877732476726	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTTTCCCAGACTCCCA	244	False	NA	61	True	TTTAAA	-15	NA	55818329	55820513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55818420_55818998_55819174_55819341_55819494_55820259
transcript_32869.known	chr12	+	593	4	FSM	ENSG00000182796.15	ENST00000635938.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	27.5358352374178	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGCCCACAGGACCT	2	True	NA	NA	False	NA	NA	NA	55830838	55835047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55831084_55832958_55833015_55833446_55833542_55834850
transcript_3287.nnic	chr1	-	1324	2	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	403	junction_1	0	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-4	True	NA	-12	True	AATAAA	-14	NA	32336236	32333838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_32335098_32336171
transcript_32871.known	chr12	+	575	4	FSM	ENSG00000182796.15	ENST00000637951.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	31.2552217859494	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTACCCCTGTGAGGGCC	4	True	NA	NA	False	NA	NA	NA	55830840	55835007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55831084_55832958_55833039_55833446_55833542_55834850
transcript_32876.known	chr12	+	8801	3	FSM	ENSG00000135414.10	ENST00000257868.10	8801	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCTTTTCTATTT	2	True	NA	7	True	AATAAA	-24	NA	55743121	55757264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55743762_55748585_55748984_55749501
transcript_32878.known	chr12	+	438	3	FSM	ENSG00000123353.10	ENST00000550836.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	165.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTTCTACACCTTT	-10	True	NA	24	True	TATAAA	-21	NA	55818043	55820476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55818113_55819341_55819494_55820259
transcript_32882.known	chr12	-	3284	7	FSM	ENSG00000135392.19	ENST00000547445.2	3284	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	88.4734737396218	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTATCTTCCCTCTTT	6403	False	NA	-7	True	TATAAA	-13	NA	55830824	55820986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55830695
transcript_32884.known	chr12	-	898	11	FSM	ENSG00000205323.9	ENST00000336133.8	898	11	0	0	0	0	multi-exon	FALSE	canonical	3	2262	junction_1	156.243399860602	13443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	-8	True	NA	-11	True	AATAAA	-19	NA	55817724	55757269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_32885.known	chr12	-	997	11	FSM	ENSG00000205323.9	ENST00000552884.5	997	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	1011.43474332257	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATATGTTCAGAGGGG	-6	True	NA	NA	False	AATAAA	-16	NA	55817722	55752579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55803628_55803729_55817665
transcript_32886.known	chr12	-	1807	16	FSM	ENSG00000257390.5	ENST00000546837.5	1807	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	1155.5520162339	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACAATGTGTTTTATTA	9681	False	NA	-16	True	AATAAA	-14	NA	55827546	55757274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55822000_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251
transcript_32887.known	chr12	-	726	10	FSM	ENSG00000205323.9	ENST00000552080.1	726	10	0	0	0	0	multi-exon	FALSE	canonical	3	2376	junction_3	125.955116442424	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTGCCCAGGAAGTG	7	True	NA	NA	False	NA	NA	NA	55817709	55760423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_32888.known	chr12	-	2242	7	FSM	ENSG00000205323.9	ENST00000552207.1	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	2562	junction_5	65.9463165511666	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGCTGGGTGTGGTGT	-4	True	NA	NA	False	AATACA	-15	NA	55817720	55792541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_32889.known	chr12	+	2019	4	FSM	ENSG00000123353.10	ENST00000243045.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	37.0435179514881	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGGTGTTGGGGGAG	-13	True	NA	NA	False	AATAAA	-15	NA	55818040	55821879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55818113_55818998_55819174_55819341_55819494_55820259
transcript_3289.known	chr1	-	1546	2	FSM	ENSG00000175130.7	ENST00000329421.8	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	16072	junction_1	0	23461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-1	True	NA	-12	True	AATAAA	-14	NA	32336233	32333838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32335098_32335946
transcript_32890.known	chr12	+	2313	4	FSM	ENSG00000182796.15	ENST00000508246.6	2313	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	24.5266295188629	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	4	True	NA	3	True	AATAAA	-17	NA	55830840	55836244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55831084_55831256_55831350_55832958_55833542_55834850
transcript_32891.known	chr12	+	2230	3	FSM	ENSG00000182796.15	ENST00000482378.6	2230	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	27	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGAGTCCAGCCTCTGC	-4	True	NA	5	True	AATAAA	-19	NA	55830832	55836246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55831084_55832958_55833542_55834850
transcript_32892.known	chr12	-	3256	7	FSM	ENSG00000135392.19	ENST00000678005.2	3256	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_6	22.7961985134949	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	5	True	NA	-5	True	TATAAA	-15	NA	55829587	55820984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829488
transcript_32893.known	chr12	+	2727	24	FSM	ENSG00000065357.20	ENST00000331886.10	2727	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	9.4522979072704	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	-12	True	NA	24	True	AATAAA	-33	NA	55931161	55954023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55931345_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_32896.known	chr12	+	2770	24	FSM	ENSG00000065357.20	ENST00000394147.5	2770	24	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	10.7819074105748	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTGGTACACTTCCT	576	False	NA	22	True	AATAAA	-31	NA	55932027	55954021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55932256_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_3290.known	chr1	-	3309	11	FSM	ENSG00000160058.19	ENST00000455895.7	3309	11	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_10	33.6881284728018	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-7	True	NA	NA	False	NA	NA	NA	32394441	32364632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_32913.known	chr12	-	884	3	FSM	ENSG00000170473.17	ENST00000454792.2	884	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGAATAAATGTGATTA	24	True	NA	-16	True	AATAAA	-14	NA	55927875	55913825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55914367_55927075_55927268_55927724
transcript_32915.known	chr12	-	653	2	FSM	ENSG00000170473.17	ENST00000549939.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTCACTGTTTTG	4873	False	NA	64	True	ATTAAA	-1	NA	55927756	55913745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55914367_55927724
transcript_32917.known	chr12	-	1207	3	FSM	ENSG00000170473.17	ENST00000408946.7	1207	3	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	43	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGCCTCCTTATTTT	5	True	NA	-14	True	AATAAA	-17	NA	55927894	55901412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55902356_55903386_55903481_55927724
transcript_32918.known	chr12	-	1073	3	FSM	ENSG00000170473.17	ENST00000398213.4	1073	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	337	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGCCTCCTTATTT	9	True	NA	-15	True	AATAAA	-16	NA	55927112	55901413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55902356_55903386_55903481_55927075
transcript_32924.known	chr12	-	1867	9	FSM	ENSG00000185664.15	ENST00000550464.5	1867	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	300.622271297387	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTTTTCTGTTGCT	-2	True	NA	-5	True	AATAAA	-14	NA	55966042	55954105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55965935
transcript_32929.known	chr12	+	2240	7	FSM	ENSG00000123374.11	ENST00000266970.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_6	23.2050042495627	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTCCTCTTATTT	-7	True	NA	24	True	ATTAAA	-26	NA	55966829	55972789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55969474_55969577_55971043_55971248_55971520
transcript_32930.known	chr12	+	1260	6	FSM	ENSG00000123374.11	ENST00000354056.4	1260	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	122.886939908194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTACACGTTAGATT	-6	True	NA	NA	False	TATAAA	-16	NA	55966830	55971912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55971043_55971248_55971520
transcript_32935.known	chr12	-	2127	11	FSM	ENSG00000185664.15	ENST00000449260.6	2127	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	270.894518216962	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	8096	False	NA	-4	True	AATAAA	-15	NA	55966022	55954104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_32936.known	chr12	-	461	3	FSM	ENSG00000185664.15	ENST00000549413.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_2	54	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCTCGCTCTGTCGCCC	8097	False	NA	NA	False	NA	NA	NA	55966021	55961199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55961464_55961621_55961733_55965935
transcript_32937.known	chr12	-	2204	12	FSM	ENSG00000185664.15	ENST00000548493.5	2204	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	273.982686308267	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTTTTCTGTTGCT	7382	False	NA	-5	True	AATAAA	-14	NA	55966736	55954105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935_55966063_55966677
transcript_32938.known	chr12	-	801	4	FSM	ENSG00000185664.15	ENST00000550590.5	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	108.369737473153	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCCAGTGCCGTTTCGA	-2	True	NA	NA	False	NA	NA	NA	55966042	55958171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55958608_55961316_55961464_55961621_55961733_55965935
transcript_32940.nnic	chr12	+	973	7	NNC	ENSG00000111540.16	novel	5273	6	NA	NA	-39	-346	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	189.828577640167	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCCTTTTTGTTTTTAT	90	False	NA	NA	False	AATAAA	-27	NA	55974034	55992740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096_55992235_55992634
transcript_32942.known	chr12	+	5273	6	FSM	ENSG00000111540.16	ENST00000360299.10	5273	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	90.3269616449042	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTGTTTCATTTTTG	-7	True	NA	13	True	AATAAA	-14	NA	55974077	55996683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_32945.nnic	chr12	+	3455	6	NNC	ENSG00000111540.16	novel	5273	6	NA	NA	18	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	186.668261897946	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	34	False	NA	8	True	AGTAAA	-19	NA	55974118	55994706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_55974340_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_32946.nic	chr12	+	1216	5	ISM	ENSG00000111540.16	ENST00000360299.10	5273	6	-43	4743	-39	0	5prime_fragment	FALSE	canonical	3	286	junction_1	98.4565259391169	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGCAAATAGTGAACCCT	90	False	NA	NA	False	NA	NA	NA	55974034	55991940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359
transcript_3295.known	chr1	-	4599	10	FSM	ENSG00000160058.19	ENST00000341071.11	4599	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	80.4051469392413	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTCCTGAACCTTT	8	True	NA	-12	True	ATTAAA	-15	NA	32394426	32365170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_32950.known	chr12	+	3322	6	FSM	ENSG00000111540.16	ENST00000553116.5	3322	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	201.727539022316	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	50	False	NA	8	True	AGTAAA	-19	NA	55973912	55994706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55974001_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_32952.known	chr12	+	2394	6	FSM	ENSG00000139531.13	ENST00000394115.6	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	55.9127892346644	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTACTTTTCTAATAAAT	0	True	NA	-28	True	NA	NA	NA	55997287	56005486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55997340_55997614_55997724_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_32955.known	chr12	+	2319	5	FSM	ENSG00000139531.13	ENST00000266971.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	42.3696530549874	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	-12	True	NA	11	True	AATAAA	-21	NA	55997275	56005525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002542_56002721_56003617
transcript_32956.known	chr12	+	543	5	FSM	ENSG00000139531.13	ENST00000552258.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	72.2923751166055	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCAAAGCTGATGCTAGC	8	True	NA	NA	False	NA	NA	NA	55997295	56003752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55997340_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_32959.known	chr12	+	2306	4	FSM	ENSG00000139531.13	ENST00000356124.8	2306	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	62.6968012652072	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	1165	False	NA	11	True	AATAAA	-21	NA	55997179	56005525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55997340_56002211_56002272_56002542_56002721_56003617
transcript_32961.nic	chr12	+	871	2	ISM	ENSG00000139531.13	ENST00000550121.5	547	4	-7	3508	-7	-3508	5prime_fragment	FALSE	canonical	3	78	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCATGCATGGTGGCAC	1237	False	NA	NA	False	NA	NA	NA	55997251	55998397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_55997340_55997614
transcript_32962.known	chr12	+	5313	8	FSM	ENSG00000123411.15	ENST00000547167.6	5313	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.6232697339283	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTTTTTGCAGACT	11	True	NA	12	True	AATAAA	-19	NA	56021042	56038435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56021581_56023670_56023765_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
transcript_32963.known	chr12	+	3683	7	FSM	ENSG00000123411.15	ENST00000551103.5	3683	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.4564392373896	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAAAGTAAAA	16	True	NA	NA	False	NA	NA	NA	56021047	56036904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56021581_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
transcript_32964.known	chr12	+	623	5	FSM	ENSG00000197728.11	ENST00000552361.1	623	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4951.4591978022	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	9	False	NA	17	True	AATAAA	-18	NA	56041892	56044223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56042065_56042132_56042170_56042424_56042603_56043362_56043494_56044118
transcript_32966.known	chr12	+	1140	4	FSM	ENSG00000197728.11	ENST00000646449.2	1140	4	0	0	0	0	multi-exon	FALSE	canonical	3	8340	junction_1	2073.62104113124	2741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTGTGAAATGGAGAT	-12	True	NA	NA	False	ATTAAA	-39	NA	56041917	56044697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56042170_56042424_56042603_56043362_56043494_56044118
transcript_32969.known	chr12	+	5229	12	FSM	ENSG00000123411.15	ENST00000262032.9	5229	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.9225282176976	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGTTTTTGCAGACT	156	False	NA	12	True	AATAAA	-19	NA	56007658	56038435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56007735_56011416_56011495_56018125_56018178_56019317_56019416_56021430_56021581_56023670_56023765_56025053_56025159_56026780_56027042_56027779_56027948_56032560_56032711_56033189_56033322_56034570
transcript_32971.known	chr12	+	1204	3	FSM	ENSG00000197728.11	ENST00000548590.1	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	8340	junction_1	958.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	15	True	NA	17	True	AATAAA	-18	NA	56042139	56044223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56042170_56042424_56043494_56044118
transcript_32977.known	chr12	+	5615	28	FSM	ENSG00000065361.17	ENST00000267101.8	5615	28	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	19.3372353093753	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTGTCTGTCAAATGA	-18	True	NA	19	True	AATAAA	-21	NA	56080164	56103505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56094190_56094401_56094557_56095256_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
transcript_3299.known	chr1	-	1630	10	FSM	ENSG00000160058.19	ENST00000373520.8	1630	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	86.7424170379189	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAAAACAGACAT	6	True	NA	NA	False	AATATA	-39	NA	32394428	32368032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383940_32386778_32386896_32394079_32394141_32394403
transcript_32990.known	chr12	+	660	4	FSM	ENSG00000065361.17	ENST00000546884.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	8.01387685344754	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTCCCCAGTCCCA	21	True	NA	NA	False	NA	NA	NA	56080203	56086672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530
transcript_32991.known	chr12	+	561	4	FSM	ENSG00000065361.17	ENST00000549282.5	561	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	49.2815043060443	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCACGCTCTGCGCCAG	-14	True	NA	NA	False	NA	NA	NA	56079856	56085139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56079935_56080196_56080383_56083750_56083903_56084994
transcript_32993.known	chr12	+	1027	3	FSM	ENSG00000065361.17	ENST00000411731.6	1027	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	8.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGGTGCGCACCTGTA	5	True	NA	14	True	AATAAA	-23	NA	56080136	56085623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56080383_56083750_56083903_56084994
transcript_32997.known	chr12	+	2386	13	FSM	ENSG00000170515.14	ENST00000303305.11	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_12	52.7973063285956	5822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGTATGCTGCTCT	-20	True	NA	18	True	AATAAA	-21	NA	56104558	56113910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475_56111530_56112822
transcript_32998.known	chr12	-	434	2	FSM	ENSG00000257553.1	ENST00000548595.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAAGGGAGCGGGCAG	4089	False	NA	NA	False	NA	NA	NA	56113905	56104613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56104783_56113640
transcript_33.known	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00076_+_0_600
transcript_33007.known	chr12	+	469	4	FSM	ENSG00000229117.9	ENST00000501597.3	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	5052	junction_1	7259.61243226294	274624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	0	True	NA	11	True	AATAAA	-38	NA	56116589	56117832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56116660_56116774_56116800_56117188_56117212_56117481
transcript_33008.known	chr12	+	676	3	FSM	ENSG00000229117.9	ENST00000546591.6	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	12955	junction_1	4922	38277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTGGAGTTGGATGGG	0	True	NA	45	True	TATAAA	-34	NA	56116632	56117967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56116800_56117188_56117212_56117481
transcript_33009.known	chr12	+	551	4	FSM	ENSG00000229117.9	ENST00000358888.7	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	9695.56098886954	17351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTGTCTATTATG	0	True	NA	5	True	AATAAA	-32	NA	56116632	56117826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56116660_56116774_56116931_56117188_56117212_56117481
transcript_33010.known	chr12	+	335	4	FSM	ENSG00000229117.9	ENST00000546485.5	335	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	9715.9498077474	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGGTCCTCTGCCCTG	-1	True	NA	NA	False	CATAAA	-10	NA	56116631	56117710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56116660_56116774_56116830_56117188_56117212_56117481
transcript_33011.known	chr12	+	595	2	FSM	ENSG00000229117.9	ENST00000552314.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	22799	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTCATCGCCCTCTGA	57	False	NA	NA	False	NA	NA	NA	56116780	56117645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56117212_56117481
transcript_33012.known	chr12	+	3577	31	FSM	ENSG00000139641.13	ENST00000267113.4	3577	31	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	107.09719884292	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACTGCACGGCCTTTAT	6	True	NA	NA	False	NA	NA	NA	56128266	56144041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134079_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_33013.known	chr12	+	4180	31	FSM	ENSG00000139641.13	ENST00000394048.10	4180	31	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_18	45.0552870248197	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTCTTTTCCTTAA	6	True	NA	17	True	ATTAAA	-17	NA	56128266	56144674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134109_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_33016.known	chr12	+	7121	3	FSM	ENSG00000135482.7	ENST00000257940.7	7121	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	11	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTTTTTCCCCCTT	4	True	NA	NA	False	AATAAA	-18	NA	56118265	56127514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56118319_56119087_56119152_56120510
transcript_33017.known	chr12	+	743	3	FSM	ENSG00000135482.7	ENST00000546903.1	743	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAATTGCCGTTTCATCC	-3	True	NA	NA	False	NA	NA	NA	56118406	56120828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56118768_56119087_56119152_56120510
transcript_3302.nnic	chr1	+	2248	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-44	-9595	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	23.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTAGTTGTCTTTC	NA	False	NA	28	True	AAGAAA	-15	NA	32465027	32487091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_3303.nnic	chr1	+	608	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-44	-11235	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	23.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTAGTGCTCGTTCTGT	NA	False	NA	15	True	AATAAA	-27	NA	32465027	32485451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_3304.nnic	chr1	+	717	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-44	-11126	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	23.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGAGGTTGGATTTTGT	NA	False	NA	124	True	NA	NA	NA	32465027	32485560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_33048.known	chr12	+	1034	8	FSM	ENSG00000196465.10	ENST00000550443.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	256.309443080517	3193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	NA	False	NA	18	True	AATAAA	-14	NA	56152438	56157976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56152632_56153808_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
transcript_3305.nnic	chr1	+	1037	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-44	-10806	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	23.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAGAAACCTTCATTG	NA	False	NA	NA	False	ATTAAA	-16	NA	32465027	32485880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_3306.known	chr1	+	12831	4	FSM	ENSG00000273274.2	ENST00000609129.2	12831	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	13.1993265821489	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTCTCCTTTCAGTT	7	True	NA	10	True	AATAAA	-20	NA	32465071	32496686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32465106_32470583_32471616_32480890_32481070_32485100
transcript_33085.known	chr12	+	655	6	FSM	ENSG00000092841.19	ENST00000547649.5	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	12145	junction_1	967.927063367897	149539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	0	True	NA	25	True	AATAAA	-14	NA	56158361	56161574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
transcript_33086.known	chr12	+	708	7	FSM	ENSG00000092841.19	ENST00000550697.6	708	7	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	6307.19043808114	12409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	-3	True	NA	30	True	AATAAA	-19	NA	56158358	56161579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_33087.known	chr12	-	403	2	FSM	ENSG00000258199.1	ENST00000553176.1	403	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGGTGCATTCTGTG	-5	True	NA	0	True	TATAAA	-21	NA	56190284	56162358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56162550_56190072
transcript_33088.known	chr12	+	703	8	FSM	ENSG00000196465.10	ENST00000552568.5	703	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	263.666146356892	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	10	True	NA	18	True	AATAAA	-14	NA	56152606	56157976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155494_56157467_56157546_56157697_56157736_56157881
transcript_33089.known	chr12	+	1258	5	FSM	ENSG00000196465.10	ENST00000405661.8	1258	5	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	137.101012031276	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGTGAGCCGAGAGATC	-7	True	NA	NA	False	NA	NA	NA	56152589	56156242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418
transcript_33090.known	chr12	+	887	2	FSM	ENSG00000196465.10	ENST00000548548.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	812	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGTTTCAGACTGCTA	2133	False	NA	17	True	AATAAA	-13	NA	56156936	56157975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56157546_56157697
transcript_33091.known	chr12	+	322	3	FSM	ENSG00000196465.10	ENST00000550550.5	322	3	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	80.5	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	2553	False	NA	18	True	AATAAA	-14	NA	56157356	56157976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56157546_56157697_56157736_56157881
transcript_33092.known	chr12	+	221	2	FSM	ENSG00000196465.10	ENST00000549380.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGACTGCTATTTTTT	161	False	NA	23	True	AATAAA	-19	NA	56157614	56157981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56157736_56157881
transcript_33093.known	chr12	+	528	5	FSM	ENSG00000092841.19	ENST00000548580.5	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_2	5717.81542090159	28781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	-16	True	NA	26	True	AATAAA	-15	NA	56158345	56161575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159974_56160149_56160242_56160321_56161386
transcript_33094.known	chr12	+	502	6	FSM	ENSG00000092841.19	ENST00000549017.5	502	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_3	5504.80141694503	17378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	-5	True	NA	25	True	AATAAA	-14	NA	56158356	56161574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56160024_56160149_56160242_56160321_56161386
transcript_33095.known	chr12	+	573	7	FSM	ENSG00000092841.19	ENST00000548400.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	6635.28016866407	8478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	20	False	NA	26	True	AATAAA	-15	NA	56158381	56161575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_33096.known	chr12	+	683	7	FSM	ENSG00000092841.19	ENST00000547408.5	683	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	6489.19120966208	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATTCAGAGGGAAAGGA	6	True	NA	31	True	AATACA	-45	NA	56158367	56163008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56162263_56162332_56162854
transcript_33097.known	chr12	-	4271	30	FSM	ENSG00000139613.12	ENST00000394023.7	4271	30	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_12	112.12841924286	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATGTCAGCGTATGTG	712	False	NA	-7	True	TTTAAA	-13	NA	56189567	56162982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56163766_56164302_56164369_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_33098.known	chr12	-	3244	3	FSM	ENSG00000139613.12	ENST00000550150.1	3244	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	275	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCAGGGCGTGGTGGCAC	1	True	NA	NA	False	AATACA	-16	NA	56189483	56183323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56185727_56186598_56187307_56189350
transcript_33103.known	chr12	-	5593	7	FSM	ENSG00000181852.18	ENST00000345093.9	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	30.4192921241329	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTTGATACACTGTCT	21	True	NA	-3	True	AGTAAA	-25	NA	56221922	56202178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221759
transcript_33104.known	chr12	-	1193	7	FSM	ENSG00000181852.18	ENST00000552656.5	1193	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	41.0991348922199	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTCGACTGGCTATCA	10	True	NA	NA	False	NA	NA	NA	56221933	56206446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221902
transcript_33113.known	chr12	-	1001	5	FSM	ENSG00000181852.18	ENST00000548225.1	1001	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.9218325684211	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	19	True	NA	-2	True	ATTAAA	-16	NA	56221860	56210036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56210569_56212991_56213062_56213957_56214071_56216428_56216614_56221759
transcript_33121.nic	chr12	-	1042	4	ISM	ENSG00000181852.18	ENST00000345093.9	5593	7	-49	7858	-38	0	5prime_fragment	FALSE	canonical	3	90	junction_3	40.077702307171	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-28	True	NA	-2	True	ATTAAA	-16	NA	56221971	56210036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221759
transcript_33122.nic	chr12	-	903	4	ISM	ENSG00000181852.18	ENST00000552656.5	1193	7	-42	3590	-42	0	5prime_fragment	FALSE	canonical	3	59	junction_3	54.6890198201512	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	7111	False	NA	-2	True	ATTAAA	-16	NA	56221975	56210036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221902
transcript_33126.known	chr12	-	2452	8	FSM	ENSG00000181852.18	ENST00000394013.6	2452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.9237970219167	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTGATGTTCCTA	7177	False	NA	-6	True	AAAAAG	-22	NA	56221909	56205449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212995_56213139_56213957_56214071_56216428_56216614_56221759
transcript_33130.known	chr12	+	663	7	FSM	ENSG00000139579.13	ENST00000399713.6	663	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	104.983199714155	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACTGAGTGCCCCAC	10	True	NA	NA	False	NA	NA	NA	56222014	56229032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56222200_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_33132.known	chr12	+	1400	7	FSM	ENSG00000139579.13	ENST00000267023.9	1400	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	56.9280735275273	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	-31	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56224442_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_33135.known	chr12	+	1411	7	FSM	ENSG00000139579.13	ENST00000341463.5	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	91.3911009526274	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	28	True	NA	4	True	AATAAA	-4	NA	56224400	56229844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56224522_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_33143.known	chr12	+	1775	6	FSM	ENSG00000139579.13	ENST00000380198.6	1775	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	18.0709711969224	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	-14	True	NA	14	True	AATAAA	-14	NA	56224358	56229854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_33149.known	chr12	-	1076	3	FSM	ENSG00000139645.11	ENST00000681390.1	1076	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTTAAGAACCACCAGAT	9569	False	NA	NA	False	NA	NA	NA	56257496	56255193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56255985_56257014_56257086_56257282
transcript_33153.known	chr12	+	1410	5	FSM	ENSG00000135469.14	ENST00000433805.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	28.0846933399672	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	-8	True	NA	NA	False	AATAAA	-16	NA	56267282	56270966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56267434_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_33156.known	chr12	+	1369	4	FSM	ENSG00000135469.14	ENST00000546544.5	1369	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	2.49443825784929	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGCTTTATTATATTG	-5	True	NA	NA	False	AATAAA	-14	NA	56267681	56270964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56267941_56269058_56269252_56269459_56269562_56270149
transcript_33157.known	chr12	+	665	3	FSM	ENSG00000135469.14	ENST00000550071.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	32	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTAACTACCTGATT	-6	True	NA	NA	False	NA	NA	NA	56267284	56269427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56267434_56267793_56267941_56269058
transcript_33160.known	chr12	-	3057	12	FSM	ENSG00000062485.19	ENST00000548567.5	3057	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_11	337.031989555103	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAGCCTATTATTAAA	-15	True	NA	-2	True	AATAAA	-16	NA	56300391	56271700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56298608_56298692_56300159
transcript_33165.known	chr12	-	2915	11	FSM	ENSG00000062485.19	ENST00000351328.8	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_3	68.5922007228227	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGCCTATTATTAAATA	-3	True	NA	0	True	AATAAA	-18	NA	56300330	56271698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
transcript_33166.known	chr12	-	2811	11	FSM	ENSG00000062485.19	ENST00000549143.5	2811	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	273.135570733656	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGCCTATTATTAAATA	9	True	NA	0	True	AATAAA	-18	NA	56300318	56271698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56285962_56286624_56286646_56300159
transcript_33186.known	chr12	+	479	3	FSM	ENSG00000257303.3	ENST00000549565.3	485	3	0	6	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGCCAGAGTGAGCTA	NA	False	NA	NA	False	ATTAAA	-31	NA	56300075	56314802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56300188_56312406_56312500_56314528
transcript_33187.known	chr12	-	624	3	FSM	ENSG00000257727.6	ENST00000547570.5	624	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	859	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	8415	False	NA	-14	True	AATAAA	-29	NA	56315750	56314489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56314967_56315129_56315243_56315716
transcript_33189.known	chr12	-	666	3	FSM	ENSG00000257727.6	ENST00000553164.1	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	813	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAATAAGAATAAAAGG	8165	False	NA	-32	True	AATAAA	-11	NA	56316000	56314507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56314967_56315129_56315243_56315906
transcript_33191.known	chr12	+	3539	2	FSM	ENSG00000257303.3	ENST00000660360.1	3539	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAAAATCCTGTTTCTA	-12	True	NA	NA	False	NA	NA	NA	56300112	56317992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56300188_56314528
transcript_33194.known	chr12	-	1450	6	FSM	ENSG00000257727.6	ENST00000273308.9	1450	6	0	0	0	0	multi-exon	FALSE	canonical	3	1434	junction_2	119.838891850684	7111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTCAATCTGGACTA	-14	True	NA	-16	True	AATAAA	-16	NA	56315988	56309843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
transcript_33195.known	chr12	-	621	4	FSM	ENSG00000257727.6	ENST00000553191.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	740.459917138591	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAACTGTGTTGTCTTTTC	9197	False	NA	NA	False	NA	NA	NA	56314968	56310432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56310596_56310957_56311055_56311210_56311454_56314850
transcript_33196.known	chr12	-	556	3	FSM	ENSG00000257727.6	ENST00000551276.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	846	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAGTACAGTGGCTCA	8959	False	NA	-5	True	AATAAA	-19	NA	56315206	56312522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56312886_56314850_56314967_56315129
transcript_33197.known	chr12	-	817	3	FSM	ENSG00000257727.6	ENST00000548013.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	1718	junction_1	24.5	2740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	-15	True	NA	-14	True	AATAAA	-29	NA	56316047	56314489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56314967_56315129_56315243_56315820
transcript_33198.known	chr12	-	674	5	FSM	ENSG00000257727.6	ENST00000551475.5	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	648.83525451381	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTGCCCCCACTTTAT	8115	False	56316066	NA	False	NA	NA	NA	56316050	56310957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315906
transcript_33201.known	chr12	+	709	5	FSM	ENSG00000110944.9	ENST00000622119.4	709	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.256095748383	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGGGGATTATTTATCC	-9	True	NA	-93	True	NA	NA	NA	56334173	56340305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56334220_56337029_56337084_56339425_56339525_56339690_56339838_56339942
transcript_33202.known	chr12	+	1037	4	FSM	ENSG00000110944.9	ENST00000228534.6	1037	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0.471404520791032	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTCTAATTTCTAGGC	1	True	NA	12	True	AATAAA	-19	NA	56338883	56340410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56339207_56339425_56339525_56339690_56339838_56339942
transcript_33204.known	chr12	-	3073	24	FSM	ENSG00000170581.14	ENST00000557235.5	3073	24	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_21	23.6538522422442	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATAACTTGCTTTCTTCT	-11	True	NA	NA	False	NA	NA	NA	56360126	56342935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355792_56356131_56356286_56356440_56356579_56360057
transcript_33205.nnic	chr12	+	368	2	Antisense	novelGene_ENSG00000175336.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTGTCAGGGTAGTA	1251	False	NA	NA	False	ATTAAA	-17	NA	56360382	56361173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_56360567_56360989
transcript_33207.known	chr12	-	4376	29	FSM	ENSG00000111602.12	ENST00000229201.4	4376	29	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_23	144.004570505698	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGACTTGGCGATATGT	6	True	NA	-6	True	ATTAAA	-27	NA	56449403	56417118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432522_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_33209.nic	chr12	-	1787	13	ISM	ENSG00000111602.12	ENST00000553532.6	5158	29	-31	11873	-31	-6684	5prime_fragment	FALSE	canonical	3	573	junction_7	88.3689786570428	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTGGGCAGCCCCACAAT	-2	True	NA	0	True	NA	NA	NA	56449457	56428235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432525_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_33213.known	chr12	-	2387	18	FSM	ENSG00000135423.13	ENST00000311966.9	2387	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_14	9.19154116923511	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	5	True	NA	-8	True	AATAAA	-18	NA	56488161	56470951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
transcript_33214.known	chr12	-	2225	17	FSM	ENSG00000135423.13	ENST00000424141.6	2225	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	13.0862523283024	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	9	True	NA	-8	True	AATAAA	-18	NA	56488129	56470951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479779_56479902_56480287_56480388_56487936
transcript_33224.known	chr12	-	859	3	FSM	ENSG00000135423.13	ENST00000471282.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCCCAGAAGTAAATAT	20	True	NA	NA	False	AATATA	-44	NA	56488362	56479568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56479902_56480287_56480388_56487936
transcript_33225.known	chr12	+	10769	2	FSM	ENSG00000176422.14	ENST00000338146.7	10769	2	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	0	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCTCTGAGAGTCTAT	3	True	NA	NA	False	AATAAA	-39	NA	56468577	56479708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56468677_56469038
transcript_33227.known	chr12	-	514	3	FSM	ENSG00000135423.13	ENST00000491880.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	30.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCTACTCAATCCCTG	-1	True	NA	NA	False	AATATA	-20	NA	56487599	56479592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56479902_56480287_56480388_56487494
transcript_33228.known	chr12	+	8488	14	FSM	ENSG00000076067.13	ENST00000262031.10	8488	14	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_7	4.40010758340772	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTGTTGATGGTGT	-1	True	NA	8	True	TATAAA	-33	NA	56521819	56596193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56522090_56562416_56562584_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
transcript_33233.nnic	chr12	+	1808	13	NIC	ENSG00000076067.13	novel	8488	14	NA	NA	-13	-8	combination_of_known_splicesites	FALSE	canonical	2	11	junction_12	9.22368629610141	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGATGAAGGAGCCCTAC	-14	True	NA	3	True	AAAACA	-25	NA	56521806	56589587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_56522090_56562416_56562584_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56589139
transcript_33234.known	chr12	+	1452	13	FSM	ENSG00000076067.13	ENST00000550726.5	1452	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.8705400981683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTATTTGGGAATGCT	1	True	NA	-81	True	AAAAAG	-13	NA	56521998	56589503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56522090_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
transcript_33239.known	chr12	-	614	6	FSM	ENSG00000076108.12	ENST00000547650.1	614	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.7509420204116	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAATGAAGGAAAAGGA	7016	False	NA	5	True	AAAAAG	-24	NA	56610479	56605991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56606064_56606246_56606313_56606632_56606734_56609735_56609938_56610113_56610216_56610408
transcript_3325.known	chr1	-	766	6	FSM	ENSG00000176261.16	ENST00000373506.8	766	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	375.03887798467	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGGTGTGCCTCATGCC	-12	True	NA	NA	False	NA	NA	NA	32650554	32621603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32650428
transcript_3326.known	chr1	-	548	6	FSM	ENSG00000176261.16	ENST00000465588.2	548	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	378.331812038057	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAATAAAAGACTCCT	703	False	NA	-48	True	AATGAA	-41	NA	32650525	32621857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32650401
transcript_33263.known	chr12	-	1759	10	FSM	ENSG00000110955.9	ENST00000262030.8	1759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3296	junction_7	471.832074124724	52461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGATTCTCTTGGTT	1	True	NA	-8	True	AATAAA	-18	NA	56645984	56638174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
transcript_33290.known	chr12	-	1017	7	FSM	ENSG00000110958.16	ENST00000448157.6	1017	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	1128.27248728113	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTTCATAACATAGA	3	True	NA	4	True	AATAAA	-19	NA	56688284	56664166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_33291.known	chr12	-	1898	8	FSM	ENSG00000110958.16	ENST00000262033.11	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	2925	junction_2	109.355066696724	6277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	3	True	NA	-15	True	AATAAA	-24	NA	56688284	56663348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_33292.known	chr12	-	2077	9	FSM	ENSG00000110958.16	ENST00000614328.4	2077	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	1302.61179342696	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGCATTTTGGCAGT	NA	False	NA	-9	True	AATAAA	-30	NA	56688408	56663342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56686868_56686918_56687997
transcript_33293.known	chr12	-	1547	7	FSM	ENSG00000110958.16	ENST00000414274.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	1103.86291419421	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	0	True	NA	-37	True	TTTAAA	-22	NA	56688287	56663612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_33322.known	chr12	-	1074	8	FSM	ENSG00000196531.14	ENST00000552540.5	1074	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	3526.66397836915	9695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-1	True	NA	-11	True	AATAAA	-20	NA	56725256	56712434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56724961
transcript_33327.known	chr12	-	1107	7	FSM	ENSG00000196531.14	ENST00000678416.1	1107	7	0	0	0	0	multi-exon	FALSE	canonical	2	75	junction_6	3730.3171633105	5380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGCCACAGATTTCCC	1	True	NA	NA	False	NA	NA	NA	56725269	56712316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724961
transcript_33328.known	chr12	-	712	7	FSM	ENSG00000196531.14	ENST00000678376.1	712	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	3756.94106140739	7075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	15	True	NA	-4	True	AATAAA	-27	NA	56725286	56712427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56725262
transcript_3333.known	chr1	+	7077	5	FSM	ENSG00000160062.15	ENST00000373510.9	7077	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	10.0343161201947	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTAGTTATGTCAC	-21	True	NA	9	True	AATAAA	-15	NA	32539426	32605941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600086
transcript_33332.known	chr12	+	1722	6	FSM	ENSG00000025423.11	ENST00000555805.5	1722	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.02496105909555	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCTGTATTATGGT	NA	False	NA	-33	True	AAGAAA	-27	NA	56752160	56787736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56752319_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_33335.known	chr12	+	1547	6	FSM	ENSG00000025423.11	ENST00000554150.5	1547	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7.39188744503053	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATCATTTGTTCTTGC	NA	False	NA	NA	False	NA	NA	NA	56752452	56787576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56752582_56763203_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_33338.known	chr12	+	1751	6	FSM	ENSG00000025423.11	ENST00000554643.5	1751	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.70454411370329	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCAGCAGTCTTT	NA	False	NA	21	True	AATAAA	-23	NA	56752448	56787790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56752582_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_3334.known	chr1	+	1943	5	FSM	ENSG00000160062.15	ENST00000316459.4	1943	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	10.8714074525794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAATCATTCATATT	-19	True	NA	NA	False	ACTAAA	-2	NA	32539428	32600990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600267
transcript_33342.known	chr12	+	1525	5	FSM	ENSG00000025423.11	ENST00000555159.5	1525	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.15475321515004	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCTGTATTATGGT	NA	False	NA	-33	True	AAGAAA	-27	NA	56752160	56787736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56752319_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_33365.known	chr12	-	2690	8	FSM	ENSG00000196531.14	ENST00000356769.7	2690	8	0	0	0	0	multi-exon	FALSE	canonical	3	7247	junction_7	1058.03732429052	65348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTCGGTGACTGGTC	NA	False	NA	-9	True	AATAAA	-22	NA	56727197	56712432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56725262
transcript_33366.known	chr12	-	1459	13	FSM	ENSG00000198056.15	ENST00000552590.6	1459	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	86.6357316584791	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTTGAGAAATAATTTA	-1	True	NA	16	True	AATAAA	-42	NA	56752373	56731595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746180_56746776_56746855_56746925_56747033_56751037_56751196_56752195
transcript_33367.known	chr12	-	1059	8	FSM	ENSG00000196531.14	ENST00000393891.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_7	3175.14970240035	14121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	3	True	NA	-11	True	AATAAA	-20	NA	56725267	56712434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724961
transcript_33368.known	chr12	-	964	8	FSM	ENSG00000196531.14	ENST00000546392.6	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	3428.40066836669	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCAGCTTGGTTT	17	False	NA	-21	True	NA	NA	NA	56725516	56712503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56725262
transcript_33369.known	chr12	-	844	9	FSM	ENSG00000196531.14	ENST00000550920.6	844	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	4221.00213219562	7092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	15	True	NA	-4	True	AATAAA	-27	NA	56725286	56712427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56719536_56719597_56724451_56724524_56725262
transcript_33370.known	chr12	-	690	7	FSM	ENSG00000196531.14	ENST00000549259.5	690	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	3772.05604485877	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAGAACAACAGTAATGA	614	False	NA	NA	False	NA	NA	NA	56724919	56712824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724825
transcript_33371.known	chr12	-	1875	14	FSM	ENSG00000198056.15	ENST00000672280.1	1875	14	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_5	101.870668674033	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAAAGAAACA	-2	True	NA	NA	False	NA	NA	NA	56752374	56731295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56740011_56740129_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
transcript_33372.known	chr12	-	1423	13	FSM	ENSG00000198056.15	ENST00000338193.11	1423	13	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_6	30.0499584026334	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTGAAAAGATTTCC	15	True	NA	-14	True	AGTAAA	-18	NA	56752323	56731579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
transcript_33373.known	chr12	-	1698	4	FSM	ENSG00000139547.8	ENST00000398138.5	1698	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGACTTCCTTTGACTC	-8	True	NA	-2	True	AATAAA	-24	NA	56957608	56951430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56952247_56952826_56952991_56954905_56955165_56957149
transcript_33376.known	chr12	-	6268	2	FSM	ENSG00000166860.3	ENST00000300101.3	6268	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGTTCTCTTCCTACCT	-28	True	NA	-15	True	AATAAA	-16	NA	57006546	56998835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57004962_57006404
transcript_33377.known	chr12	-	930	8	FSM	ENSG00000166863.13	ENST00000357616.7	930	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	47.151514356619	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	36	False	NA	-2	True	AATAAA	-18	NA	57016538	57009999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57010289_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_33380.known	chr12	-	804	7	FSM	ENSG00000166863.13	ENST00000458521.7	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	7.47031161033832	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-1	True	NA	-2	True	AATAAA	-18	NA	57016529	57009999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_33381.nnic	chr12	-	861	7	NNC	ENSG00000166863.13	novel	930	8	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	39.4701012019084	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	10	False	NA	-2	True	AATAAA	-18	NA	57016564	57009999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015825_57016386
transcript_33383.known	chr12	-	731	6	FSM	ENSG00000166863.13	ENST00000441881.5	731	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	43.0692465687525	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATGAATGATGTGGTG	54	False	NA	-12	True	AATAAA	-8	NA	57016520	57010009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57010289_57012377_57012453_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_33386.known	chr12	-	5617	9	FSM	ENSG00000166881.10	ENST00000300128.9	5617	9	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	34.0328425935889	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	1	True	NA	-3	True	AATAAA	-14	NA	57078791	57055642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57069233_57069307_57070673_57070894_57072787_57072913_57078618
transcript_33388.known	chr12	-	5370	8	FSM	ENSG00000166881.10	ENST00000379391.7	5370	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	59.8781074776252	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	-7	True	NA	-3	True	AATAAA	-14	NA	57078763	57055642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57070819_57070894_57072787_57072913_57078618
transcript_33402.nic	chr12	-	2841	3	ISM	ENSG00000166881.10	ENST00000379391.7	5370	8	-31	12711	-3	2320	5prime_fragment	FALSE	canonical	3	235	junction_2	7	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGTTTATTCATTTTT	-2	True	NA	NA	False	TTTAAA	-15	NA	57078794	57068353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_57070894_57072787_57072913_57078618
transcript_33408.known	chr12	+	1693	7	FSM	ENSG00000123384.14	ENST00000553277.5	1693	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	9.59890039998795	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTCAGACGCCTGA	-10	True	NA	NA	False	AATAAA	-22	NA	57128492	57150059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57149679
transcript_33409.known	chr12	-	2728	23	FSM	ENSG00000166888.12	ENST00000640254.2	2728	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_22	29.2382631676003	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAGGACCTCACTAAGC	-7	True	NA	NA	False	NA	NA	NA	57111374	57096722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57110042_57110111_57111128
transcript_33410.known	chr12	+	14923	89	FSM	ENSG00000123384.14	ENST00000243077.8	14923	89	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_3	98.1931916813074	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGCCAAAAAAAAAAAAAAGA	-20	True	NA	NA	False	AATAAA	-27	NA	57128482	57213361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57154207_57154371_57154478_57154702_57156093_57156284_57156776_57156921_57158401_57158639_57159824_57160006_57160892_57161116_57162316_57162519_57162857_57162984_57165804_57165946_57166083_57166210_57166929_57167047_57167443_57167525_57169139_57169308_57173167_57173351_57173779_57173981_57175459_57175706_57175908_57176107_57177040_57177246_57177426_57177592_57178358_57178604_57178889_57179022_57179328_57179557_57179781_57179957_57180046_57180142_57180329_57180480_57180666_57180808_57181156_57181292_57183378_57183511_57183774_57183910_57184084_57184215_57184325_57184453_57184838_57184991_57185080_57185206_57185530_57185909_57187266_57187457_57190804_57191010_57191319_57191513_57192844_57192971_57193175_57193305_57193565_57193686_57193898_57194013_57194353_57194504_57194576_57194700_57194984_57195102_57195270_57195400_57195657_57195781_57195862_57196004_57196086_57196278_57196981_57197166_57197298_57197385_57197544_57197665_57198155_57198344_57198464_57198671_57199211_57199401_57199876_57200026_57200441_57200536_57200698_57200816_57201033_57201154_57201496_57201620_57201779_57201906_57202420_57202538_57203180_57203288_57203388_57203522_57204409_57204530_57204626_57204750_57205108_57205250_57205350_57205486_57205557_57205678_57206472_57206742_57208037_57208217_57208710_57208818_57209082_57209200_57209691_57209869_57210028_57210170_57210306_57210481_57210717_57210880_57211175_57211351_57211486_57211589_57211749_57211815_57211926_57212018_57212116_57212262_57212414
transcript_33411.known	chr12	-	2924	22	FSM	ENSG00000166888.12	ENST00000556155.5	2924	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	24.3582483573542	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTCAGGCTCTGAGA	NA	False	NA	NA	False	NA	NA	NA	57129100	57096340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57128972
transcript_33413.known	chr12	-	644	3	FSM	ENSG00000166888.12	ENST00000557635.5	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	37.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCATCTTGCAACACATC	1466	False	NA	NA	False	NA	NA	NA	57110340	57107636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57107744_57108162_57108300_57109940
transcript_33414.known	chr12	+	1904	12	FSM	ENSG00000182199.11	ENST00000557433.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_4	333.717453608551	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	37	False	NA	34	True	AATAAA	-13	NA	57229758	57234726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231918_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33417.known	chr12	+	2006	12	FSM	ENSG00000182199.11	ENST00000414700.7	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	315.697731780321	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	75	False	NA	34	True	AATAAA	-13	NA	57230085	57234726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57230245_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33420.known	chr12	+	1765	12	FSM	ENSG00000182199.11	ENST00000553474.5	1765	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	326.457925098326	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACTTAGAAGGAGGGC	15	False	NA	NA	False	NA	NA	NA	57230327	57234551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57230421_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33423.known	chr12	+	2121	12	FSM	ENSG00000182199.11	ENST00000449049.7	2121	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	336.377984951944	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATCTAATAAAATGCT	4	True	NA	7	True	NA	NA	NA	57230359	57234699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57230661_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33432.known	chr12	+	2215	11	FSM	ENSG00000182199.11	ENST00000556825.5	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	319.216055360629	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	3422	False	NA	29	True	AATGAA	-16	NA	57229572	57234935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57229812_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33438.known	chr12	-	701	1	FSM	ENSG00000276727.1	ENST00000617433.1	701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGCCCCCTCTCCTTAC	6924	False	NA	NA	False	AAAACA	-22	NA	57230198	57229497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57229500_57230200
transcript_33439.known	chr12	+	1918	12	FSM	ENSG00000182199.11	ENST00000557487.5	1918	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	338.11186959886	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	-11	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232482_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33440.known	chr12	+	879	7	FSM	ENSG00000182199.11	ENST00000554604.5	879	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	525.335448388297	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCGTCACCACCACTACTC	-2	True	NA	NA	False	NA	NA	NA	57230393	57232801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57230463_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232424_57232576_57232703
transcript_33441.known	chr12	+	3416	6	FSM	ENSG00000182199.11	ENST00000554467.5	3416	6	0	0	0	0	multi-exon	FALSE	canonical	3	1091	junction_2	69.4475341534888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	-11	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57229812_57230802_57231914_57232210_57232576_57232703_57233663_57233748_57233905_57234002
transcript_33442.known	chr12	-	4372	24	FSM	ENSG00000179912.21	ENST00000402412.6	4411	24	38	1	0	0	multi-exon	TRUE	canonical	3	52	junction_13	18.1585123013453	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAGTCACTGTTTCTCT	-2	True	NA	-9	True	TATAAA	-20	NA	57431005	57253764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57292571_57292668_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57310263_57310464_57395748_57395819_57430719
transcript_33448.known	chr12	+	2797	21	FSM	ENSG00000166986.15	ENST00000262027.10	2797	21	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_9	80.0520299555233	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGACCTTTCCTTT	-6	True	NA	18	True	AATAAA	-22	NA	57488067	57516652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
transcript_33458.known	chr12	-	1439	16	FSM	ENSG00000175203.17	ENST00000549394.5	1439	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	248.955328433748	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTTACTATAACTCTAG	110	False	NA	NA	False	NA	NA	NA	57547120	57530616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538252_57538348_57541363_57541373_57546027_57546097_57547027
transcript_33463.known	chr12	-	1705	15	FSM	ENSG00000175203.17	ENST00000543672.6	1705	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	219.715307447002	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	0	True	NA	-3	True	ATTAAA	-17	NA	57547177	57530309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538518_57538525_57546027_57546097_57547027
transcript_33468.known	chr12	-	1902	14	FSM	ENSG00000175203.17	ENST00000678521.1	1902	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	167.212368954455	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAGAGTTTCAAAATAT	8	True	NA	-2	True	AATAAA	-18	NA	57547222	57530152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532808_57532979_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_33476.known	chr12	-	1677	13	FSM	ENSG00000175203.17	ENST00000678322.1	1677	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	174.047806331734	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	6	True	NA	-3	True	ATTAAA	-17	NA	57547224	57530309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57547027
transcript_33477.known	chr12	-	1869	13	FSM	ENSG00000175203.17	ENST00000678505.1	1869	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	176.2989096834	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTACAAAACAGAATTAAAA	0	True	NA	77	True	NA	NA	NA	57547177	57530073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_33479.known	chr12	-	1527	13	FSM	ENSG00000175203.17	ENST00000550201.5	1527	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	173.859857356435	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTACAACTGTTTCTGA	25	True	NA	-47	True	NA	NA	NA	57547152	57530353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_33483.known	chr12	+	5814	30	FSM	ENSG00000155980.13	ENST00000674619.1	5814	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	11.265153620257	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTTGTTGTAAATATTC	NA	False	NA	14	True	AATAAA	-19	NA	57550026	57586630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57550401_57563438_57563527_57563619_57563694_57564107_57564213_57564459_57564509_57564917_57564974_57567125_57567214_57567493_57567619_57568962_57569068_57569255_57569405_57569534_57569684_57569986_57570163_57571320_57571390_57572060_57572268_57572579_57572727_57575083_57575273_57575639_57575758_57576086_57576152_57576268_57576379_57576760_57576863_57577712_57577774_57578008_57578081_57578237_57578343_57579185_57579207_57580955_57581173_57581414_57581569_57581869_57581953_57582601_57582630_57583100_57583216_57584217
transcript_33487.known	chr12	-	1673	11	FSM	ENSG00000123329.20	ENST00000552953.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.68917334913934	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGCAGTTCCTTTATT	3227	False	NA	-4	True	CATAAA	-17	NA	57476641	57472263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57472689_57473602_57473709_57474041_57474177_57474422_57474477_57474625_57474704_57474874_57474974_57475290_57475399_57475482_57475616_57475832_57475932_57476070_57476455_57476589
transcript_33490.known	chr12	+	3286	15	FSM	ENSG00000155980.13	ENST00000675929.1	3286	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	8.48407872645785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGTGCACTTTAAAGAA	2567	False	NA	NA	False	NA	NA	NA	57572140	57585339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57572268_57572579_57572727_57575083_57575273_57575639_57575758_57576086_57576152_57576268_57576379_57576760_57576863_57577712_57577774_57578008_57578081_57578237_57578343_57580955_57581173_57581414_57581569_57581869_57581953_57582601_57583216_57584217
transcript_33503.known	chr12	+	2460	2	FSM	ENSG00000139269.3	ENST00000266646.3	2460	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTGTTACAGTCTT	12	True	NA	42	True	NA	NA	NA	57455306	57458025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57455835_57456093
transcript_33505.known	chr12	+	314	2	FSM	ENSG00000111087.10	ENST00000530789.1	314	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAACCCTATTTGAATCCT	369	False	NA	NA	False	ATTAAA	-21	NA	57460512	57464943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57460556_57464672
transcript_33506.known	chr12	-	211	2	FSM	ENSG00000175203.17	ENST00000549712.1	211	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATGTGTGCTGCCAC	3	True	NA	NA	False	NA	NA	NA	57547174	57546027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57546092_57547027
transcript_33508.known	chr12	+	3972	12	FSM	ENSG00000111087.10	ENST00000228682.7	3972	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	7.96687356371151	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATGCCACTTTATGTAT	-5	True	NA	1	True	AATAAA	-20	NA	57459784	57472268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57460202_57463664_57463792_57463998_57464092_57464672_57464869_57465110_57465256_57465606_57465697_57465787_57465926_57466239_57466390_57467332_57467498_57467993_57468225_57469430_57469699_57470316
transcript_33509.known	chr12	+	2979	19	FSM	ENSG00000166986.15	ENST00000545888.6	2979	19	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	386.333065701502	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGACCTTTCCTTTTGT	-8	True	NA	21	True	AATAAA	-25	NA	57488065	57516655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57516338_57516434
transcript_33510.known	chr12	-	903	4	FSM	ENSG00000175197.13	ENST00000346473.8	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	22.4845626053867	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGTCTTTTACTTTTT	-2	True	NA	-7	True	ATTAAA	-15	NA	57520514	57516592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57517181_57517268_57517439_57517705_57517754_57520417
transcript_33511.known	chr12	-	1067	4	FSM	ENSG00000175197.13	ENST00000551116.5	1067	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.2493523272593	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTTACTTTTTCTTC	-5	True	NA	-3	True	ATTAAA	-19	NA	57520517	57516588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57517181_57517268_57517596_57517705_57517754_57520417
transcript_33512.known	chr12	+	3176	10	FSM	ENSG00000166908.18	ENST00000354947.10	3176	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	19.1472526475893	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	-38	True	NA	18	True	AATAAA	-15	NA	57591191	57603418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_33516.nic	chr12	+	1248	2	ISM	ENSG00000166908.18	ENST00000550095.5	941	8	-70	5432	4	-4090	5prime_fragment	FALSE	canonical	3	196	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCACAGGGTTTTATG	-34	True	NA	NA	False	AATAAA	-14	NA	57591195	57595004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_57591464_57594024
transcript_33523.known	chr12	+	2028	7	FSM	ENSG00000178498.16	ENST00000337737.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	39.460599195766	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	-2	True	NA	19	True	AATAAA	-25	NA	57604823	57609802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_33526.nic	chr12	+	2621	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	-166	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	42.3070784726255	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	1486	False	NA	17	True	AATAAA	-23	NA	57604455	57609800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_33528.nic	chr12	+	2101	7	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	52.4044103317862	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	0	True	NA	17	True	AATAAA	-23	NA	57604628	57609800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_57604859_57605988_57606030_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_33535.known	chr12	+	1840	6	FSM	ENSG00000178498.16	ENST00000551632.1	1840	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	51.6139516022558	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTTCTTTTCC	8	True	NA	21	True	AATAAA	-27	NA	57604833	57609804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_33542.nnic	chr12	+	1135	4	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	-38	-3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	62.1950337424317	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTATGCCACACCCGTT	-4	True	NA	14	True	AATAAA	-20	NA	57604583	57609797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_57604859_57606189_57606253_57606442_57606519_57609076
transcript_33543.known	chr12	+	2246	16	FSM	ENSG00000240771.8	ENST00000333972.11	2246	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.45143607047182	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGGCTGCTGTCTTGGCA	11	True	NA	27	True	AATAAA	-16	NA	57610179	57617243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57610316_57610569_57610685_57612929_57613145_57613263_57613360_57613439_57613517_57613693_57613761_57614015_57614120_57614330_57614401_57614515_57614606_57614688_57614782_57614966_57615018_57615236_57615315_57615511_57615713_57615836_57616018_57616283_57616496_57616783
transcript_33550.known	chr12	+	2682	15	FSM	ENSG00000135506.16	ENST00000315970.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	189.599362782017	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	-10	True	NA	25	True	AATAAA	-16	NA	57694131	57721557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_33551.known	chr12	+	2457	14	FSM	ENSG00000135506.16	ENST00000389142.9	2457	14	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_11	112.3457259097	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	5	True	NA	25	True	AATAAA	-16	NA	57694146	57721557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
transcript_33552.known	chr12	+	2505	14	FSM	ENSG00000135506.16	ENST00000257966.12	2505	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	192.29686123345	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	3	True	NA	23	True	AATAAA	-14	NA	57694144	57721555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
transcript_33565.known	chr12	-	776	7	FSM	ENSG00000135446.17	ENST00000546489.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	532.181673240758	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCTCTGCCTTTCGAGC	-22	True	NA	NA	False	NA	NA	NA	57752322	57748590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57752174
transcript_33566.known	chr12	+	1100	6	FSM	ENSG00000135452.10	ENST00000549052.5	1100	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.0051610755105	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCAAGAACTCTTTCCT	2	True	NA	NA	False	NA	NA	NA	57745049	57747656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57745218_57745744_57745913_57746175_57746257_57746592_57746721_57747017_57747132_57747215
transcript_33576.known	chr12	+	582	5	FSM	ENSG00000135452.10	ENST00000552816.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	70.5775282933598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAGCCCCACATGCC	-9	True	NA	NA	False	NA	NA	NA	57745038	57747025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57745232_57745744_57745913_57746175_57746257_57746588_57746721_57747017
transcript_33580.known	chr12	+	3434	4	FSM	ENSG00000135452.10	ENST00000547992.5	3434	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	66.7199786837163	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGGATATGAAGTTCCT	-25	True	NA	NA	False	AATAAA	-45	NA	57745022	57750211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57745218_57745744_57745874_57747017_57747132_57747215
transcript_33583.known	chr12	+	475	4	FSM	ENSG00000135452.10	ENST00000547472.5	475	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	61.937244225282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGATCCTTCTGACTTT	18	True	NA	NA	False	NA	NA	NA	57745065	57747292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57745218_57746588_57746721_57747017_57747132_57747215
transcript_33584.known	chr12	-	558	4	FSM	ENSG00000135446.17	ENST00000549606.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	732.89881065988	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCCATCTTTCTACAGA	12	True	NA	NA	False	NA	NA	NA	57752353	57748425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57752174
transcript_33586.known	chr12	+	1500	2	FSM	ENSG00000255737.2	ENST00000542466.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCACATTTTGCGCTTG	-16	True	NA	33	True	TATAAA	-28	NA	57726270	57728356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57726379_57726964
transcript_33587.known	chr12	-	1865	8	FSM	ENSG00000135446.17	ENST00000257904.11	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	1407	junction_3	80.1139494592495	1909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTATATTCGCTA	-10	True	NA	NA	False	AATATA	-15	NA	57752310	57747726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57751499_57751737_57752174
transcript_33592.known	chr12	+	2246	7	FSM	ENSG00000257921.6	ENST00000651284.1	2246	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	170.672607318482	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAGTTATTAAACAT	1	True	NA	-17	True	AAAACA	-25	NA	57772659	57797554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57772902_57773016_57773129_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_33595.known	chr12	+	770	7	FSM	ENSG00000123297.20	ENST00000497617.1	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	189.478890644842	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTGGGCAGCATGTGGT	108	False	NA	NA	False	AAAACA	-22	NA	57782880	57796367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782908_57783109_57783284_57783614_57783653_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_33603.known	chr12	+	689	6	FSM	ENSG00000123297.20	ENST00000457189.1	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	150.041860825571	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCAGAGTCCCTCAC	45	False	NA	NA	False	NA	NA	NA	57782817	57796261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782908_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_33613.known	chr12	-	1378	6	FSM	ENSG00000037897.17	ENST00000324871.12	1378	6	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_4	19.1164850325576	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCTGGAGAGTCC	2	True	NA	2	True	NA	NA	NA	57772105	57768470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771973
transcript_33614.known	chr12	-	1096	5	FSM	ENSG00000037897.17	ENST00000257848.7	1096	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	104.965172795552	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATTCTGCCATTTCTC	-12	True	NA	-22	True	NA	NA	NA	57772119	57768581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57771093_57771258_57771973
transcript_33615.known	chr12	+	1997	6	FSM	ENSG00000123297.20	ENST00000652027.2	1997	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	22.5690052948729	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	14	True	NA	16	True	ATTAAA	-32	NA	57782786	57797587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_33616.known	chr12	+	1085	5	FSM	ENSG00000123297.20	ENST00000651899.1	1085	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	176.570630343781	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATACTGGATTTAGCTT	3	True	NA	19	True	AATAAA	-21	NA	57782775	57796733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782878_57783109_57783284_57786162_57786292_57787039_57787163_57796176
transcript_33617.known	chr12	+	1218	7	FSM	ENSG00000123297.20	ENST00000323833.12	1218	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	168.738127154344	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTGGATTTAGCTTT	3	True	NA	20	True	AATAAA	-22	NA	57782775	57796734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57791964_57792028_57792985_57793074_57796176
transcript_33618.known	chr12	+	651	6	FSM	ENSG00000123297.20	ENST00000543727.5	651	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	150.520961995331	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTAAGCACCTTAAAA	26	True	NA	NA	False	NA	NA	NA	57782798	57802631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57802554
transcript_33622.nnic	chr12	+	444	2	Antisense	novelGene_ENSG00000245651.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTCTCAGTAAAATGG	5393	False	NA	NA	False	AATAAA	-19	NA	57852613	57890522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_57852848_57890312
transcript_33625.nnic	chr12	+	1081	6	NNC	ENSG00000166896.9	novel	3134	6	NA	NA	-37	201	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	34.7470862087744	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTGTTTTTATTACAT	-32	True	NA	17	True	AATAAA	-23	NA	57941503	57957141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_57941780_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_33627.known	chr12	+	3134	6	FSM	ENSG00000166896.9	ENST00000300145.4	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	11.1642285895623	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGGTCTTCAAATT	31	True	NA	NA	False	AATAGA	-34	NA	57941566	57959148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57941889_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_33633.known	chr12	+	519	4	FSM	ENSG00000166896.9	ENST00000549257.5	519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.026446699932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAATGACATTTTTATAT	124	False	NA	NA	False	AATATA	-4	NA	57941795	57956890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57941889_57951757_57951896_57953605_57953690_57956686
transcript_33634.known	chr12	-	495	4	FSM	ENSG00000257698.3	ENST00000667438.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	44.0782133132559	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	-29	True	NA	-5	True	AATAAA	-14	NA	57936175	57931527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935469_57935554_57935838_57935915_57936050
transcript_33636.known	chr12	-	986	3	FSM	ENSG00000257698.3	ENST00000653595.1	986	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAATTCATAAAAGGAAAT	-9	True	NA	NA	False	AAGAAA	-2	NA	57936155	57931227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935394_57935554_57935838
transcript_33637.known	chr12	-	2214	3	FSM	ENSG00000257698.3	ENST00000659090.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0.5	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATATATGTTGATACAA	5016	False	NA	NA	False	AAAACA	-42	NA	57936345	57930114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935469_57935554_57935838
transcript_33639.known	chr12	-	894	3	FSM	ENSG00000257698.3	ENST00000668073.1	894	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACTAAACAGAATTACTC	-20	True	NA	NA	False	NA	NA	NA	57936166	57931294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935469_57935593_57935838
transcript_33641.known	chr12	-	451	2	FSM	ENSG00000257698.3	ENST00000551421.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	5282	False	57936095	-5	True	AATAAA	-14	NA	57936079	57931527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935838
transcript_33642.known	chr12	-	672	3	FSM	ENSG00000257698.3	ENST00000664635.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACATTTCTTTTTTTCTC	24	True	NA	70	True	ATTAAA	-1	NA	57936122	57931452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935469_57935573_57935838
transcript_33643.known	chr12	-	803	3	FSM	ENSG00000257698.3	ENST00000546580.2	803	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	-29	True	NA	-5	True	AATAAA	-14	NA	57936175	57931527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935297_57935554_57935838
transcript_3365.known	chr1	-	1567	7	FSM	ENSG00000176261.16	ENST00000468695.6	1567	7	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_3	211.074565550239	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-8	True	NA	-3	True	AATAAA	-19	NA	32650550	32620819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_33652.nnic	chr12	+	761	5	NNC	ENSG00000286351.2	novel	413	3	NA	NA	-128	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.04633819296811	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGTGTGTGTGTGTGTG	NA	False	NA	NA	False	ATTAAA	-17	NA	59102015	59130876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_59102224_59107973_59108078_59113489_59113609_59119717_59119823_59130651
transcript_33657.nnic	chr12	+	657	4	NNC	ENSG00000286351.2	novel	423	3	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.24721912892465	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	59102036	59130875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_59102224_59113489_59113609_59119717_59119845_59130651
transcript_33659.nnic	chr12	+	491	3	FSM	ENSG00000286351.2	ENST00000687666.1	423	3	-72	4	-60	0	multi-exon	FALSE	canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGTGTGTGTGTGT	21	True	NA	NA	False	ATTAAA	-16	NA	59102083	59130875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_59102224_59119717_59119845_59130651
transcript_3366.known	chr1	-	514	6	FSM	ENSG00000176261.16	ENST00000436661.6	514	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	247.535532802869	1933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	668	False	NA	-20	True	AATAAA	-17	NA	32650560	32621829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_3367.known	chr1	-	588	7	FSM	ENSG00000176261.16	ENST00000476493.6	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	380.655027551194	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGAAGAACTGTTTTTG	-8	True	NA	-31	True	AATAAA	-6	NA	32650550	32621840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650428
transcript_3368.known	chr1	-	598	7	FSM	ENSG00000176261.16	ENST00000373501.6	598	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	336.397953818589	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	703	False	NA	-20	True	AATAAA	-17	NA	32650525	32621829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_33680.nnic	chr12	-	764	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTGATTTTTCTTCCC	-6	True	NA	0	True	AATAAA	-32	NA	59328609	59321831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59322184_59326402_59326562_59328356
transcript_33682.nnic	chr12	-	615	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	-6	True	NA	-14	True	AATAAA	-13	NA	59328609	59321923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59322184_59326402_59326505_59328356
transcript_33684.nnic	chr12	-	750	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	NA	False	NA	-14	True	AATAAA	-13	NA	59328687	59321923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59322184_59326402_59326562_59328356
transcript_33688.nnic	chr12	-	1692	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTGCTTTCTTTCT	NA	False	NA	0	True	AATATA	-26	NA	59328625	59319555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_3369.known	chr1	-	312	2	FSM	ENSG00000176261.16	ENST00000341885.6	312	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCCCTCCTGTACCACT	663	False	NA	NA	False	NA	NA	NA	32650565	32600171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32600351_32650432
transcript_33690.nnic	chr12	-	1385	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGACTTATTTGTGT	NA	False	NA	-2	True	ACTAAA	-19	NA	59328625	59319862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_33692.nnic	chr12	-	1172	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	158	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	NA	False	NA	-3	True	AGTAAA	-20	NA	59328625	59320075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_33694.nnic	chr12	-	1101	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTTAATGTCAT	NA	False	NA	-19	True	ATTAAA	-24	NA	59328625	59320146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_33696.nnic	chr12	-	621	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	45	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGCCTTTTCAAATGACT	NA	False	NA	-17	True	TATAAA	-24	NA	59328625	59320626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_33698.nnic	chr12	-	558	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_1	0	212	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	NA	False	NA	-14	True	AATAAA	-13	NA	59328654	59321923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59322184_59328356
transcript_3370.known	chr1	-	620	7	FSM	ENSG00000176261.16	ENST00000473294.7	620	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	464.90169211709	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	7	True	NA	-20	True	AATAAA	-17	NA	32650535	32621829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32633261_32633355_32633644_32633728_32633950_32634111_32634767_32634793_32650432
transcript_33700.known	chr12	+	11936	6	FSM	ENSG00000118596.12	ENST00000547379.6	11936	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.49799919935936	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAAATGAAATCTATA	-23	True	NA	NA	False	AATAAA	-16	NA	59596028	59789841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_59596237_59655151_59655251_59704771_59705019_59771218_59771363_59774656_59775476_59779422
transcript_33702.known	chr12	+	2250	6	FSM	ENSG00000118596.12	ENST00000552432.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAATTTATTTTTAAGGT	15	True	NA	NA	False	AATAAA	-22	NA	59596066	59780213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_59596237_59655151_59655251_59704791_59705019_59771218_59771363_59774656_59775476_59779422
transcript_33703.known	chr12	-	2718	6	FSM	ENSG00000198673.11	ENST00000551619.5	2718	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.27375485654325	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTCTTTCATAAATTACA	2099	False	NA	NA	False	AATAAA	-18	NA	62258823	61708273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_61710418_61753621_61753747_61754871_61755025_61867319_61867427_62023651_62023780_62258762
transcript_33708.nic	chr12	-	543	3	NIC	ENSG00000198673.11	novel	427	2	NA	NA	-91	66	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCCGTTTTACTTTAAA	661	False	NA	NA	False	ATTAAA	-20	NA	62260261	62255098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_62255315_62258762_62258843_62260014
transcript_33709.nic	chr12	-	604	3	NIC	ENSG00000198673.11	novel	427	2	NA	NA	-84	66	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCCGTTTTACTTTAAA	668	False	NA	NA	False	ATTAAA	-20	NA	62260254	62255098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_62255315_62258762_62258911_62260014
transcript_3371.known	chr1	-	680	6	FSM	ENSG00000176261.16	ENST00000483138.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	330.18455445402	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGTTTTAATTTGTAT	7	True	NA	NA	False	TATAAA	-16	NA	32650535	32627571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32627866_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_33710.known	chr12	+	14971	22	FSM	ENSG00000135655.16	ENST00000280377.10	14971	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_6	32.9366188561911	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	10	True	NA	NA	False	ATTAAA	-15	NA	62260403	62416389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_33711.known	chr12	+	14950	21	FSM	ENSG00000135655.16	ENST00000353364.7	14950	21	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	30.6551790077957	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	222	False	NA	NA	False	ATTAAA	-15	NA	62260337	62416389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_33712.known	chr12	+	2226	7	FSM	ENSG00000135655.16	ENST00000312635.10	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	63.4229628937518	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTTTTTATTTTTGA	3	True	NA	NA	False	AATAAA	-15	NA	62260396	62336690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62335165
transcript_33716.known	chr12	+	584	6	FSM	ENSG00000135655.16	ENST00000549523.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	92.8129301336834	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCAGTATTCCAGATGA	0	True	NA	23	True	AAGAAA	-2	NA	62260355	62321489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62312285_62312310_62314789_62314917_62321463
transcript_33717.known	chr12	+	579	4	FSM	ENSG00000135655.16	ENST00000537297.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	88.5299698156255	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTAATAATATGGAAAT	14	True	NA	NA	False	ATTAAA	-21	NA	62260407	62304896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62304672
transcript_33718.known	chr12	+	648	4	FSM	ENSG00000135655.16	ENST00000548524.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	10.2089285540757	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTGTATGCTTTTG	5	True	NA	NA	False	NA	NA	NA	62260398	62315073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789
transcript_33719.known	chr12	+	1022	3	FSM	ENSG00000135655.16	ENST00000551206.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTCCCCCGACCCTCC	13	True	NA	NA	False	NA	NA	NA	62260406	62303586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789
transcript_33722.known	chr12	+	6130	36	FSM	ENSG00000061987.16	ENST00000546600.5	6130	36	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_34	27.9614019677126	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGCATTTATTTAAATTT	1	True	NA	11	True	AATAAA	-21	NA	62466821	62593278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566013_62566032_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62588855_62588917_62592585
transcript_33723.known	chr12	+	491	1	FSM	ENSG00000275180.1	ENST00000619323.1	491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGAATGGTTTTGTTT	182	False	NA	13	True	AATAAA	-15	NA	62603908	62604399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62603900_62604400
transcript_33724.known	chr12	+	645	1	FSM	ENSG00000139239.7	ENST00000484568.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGGCAATCATAAAAAG	21	False	NA	NA	False	AAGAAA	-4	NA	62965324	62965969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62965300_62966000
transcript_33725.known	chr12	-	3976	22	FSM	ENSG00000177990.12	ENST00000324472.9	3976	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	11.723573553774	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTGTAAATTATTTTG	-13	True	NA	NA	False	AATAAA	-16	NA	63668493	63558912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_63560663_63569223_63569350_63570757_63570858_63580661_63580837_63582405_63582526_63583811_63583837_63594086_63594134_63595965_63596038_63597808_63597911_63600305_63600387_63608615_63608676_63617303_63617391_63618150_63618229_63621237_63621338_63624039_63624132_63626468_63626527_63644402_63644497_63647244_63647366_63661343_63661482_63663757_63663846_63665834_63665860_63668056
transcript_33729.known	chr12	-	882	4	FSM	ENSG00000177990.12	ENST00000536494.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAAGAGTATGGTTGTTA	NA	False	NA	NA	False	NA	NA	NA	63668939	63660894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_63661482_63663757_63663846_63665834_63665860_63668757
transcript_33733.known	chr12	+	1966	6	FSM	ENSG00000118600.13	ENST00000537373.6	1966	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	28.2729552753157	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGAGAGGTTTAATT	9	False	NA	87	True	AATAAA	-22	NA	63780125	63809558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_63780463_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_33735.known	chr12	+	882	5	FSM	ENSG00000118600.13	ENST00000537982.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	35.7036412708844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTATGCACAAAATTTA	0	True	NA	NA	False	AAAAAG	-28	NA	63780116	63802203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_63780463_63781018_63781175_63782540_63782705_63784969_63785073_63802090
transcript_33736.known	chr12	+	360	2	FSM	ENSG00000196935.9	ENST00000542381.1	360	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTTCGTTGATTGGAA	8517	False	NA	NA	False	ATTAAA	-17	NA	64042793	64043627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64042973_64043446
transcript_33737.known	chr12	-	2698	4	FSM	ENSG00000174206.13	ENST00000311915.12	2698	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.9771087709958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGATGTAAGTGTTTTT	5	True	NA	NA	False	ATTAAA	-15	NA	64222265	64186315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64187653_64193846_64194659_64215677_64215964_64222002
transcript_33738.known	chr12	-	4159	3	FSM	ENSG00000174206.13	ENST00000398055.8	4159	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCAGACTGCTTTCT	-26	True	NA	-8	True	ATTAAA	-17	NA	64222296	64191079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64194659_64215677_64215964_64222002
transcript_33740.known	chr12	-	574	1	FSM	ENSG00000174206.13	ENST00000615991.1	574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCTTCATTGTTTTAA	-2	True	NA	NA	False	CATAAA	-17	NA	64222272	64221698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64221700_64222300
transcript_33741.known	chr12	-	2441	3	FSM	ENSG00000174206.13	ENST00000544871.1	2441	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTGTTACTGGTTTGA	-26	True	NA	-3	True	AATAAA	-20	NA	64222296	64192638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64194659_64215677_64215964_64222161
transcript_33744.known	chr12	-	1059	8	FSM	ENSG00000185306.13	ENST00000536975.5	1059	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3.39867921524866	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	64293383	64266982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64277679_64277804_64284663_64284754_64285953_64286061_64293280
transcript_33746.known	chr12	-	935	7	FSM	ENSG00000185306.13	ENST00000542397.5	935	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5939764421413	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	64293383	64266982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64284663_64284754_64285953_64286061_64293280
transcript_33753.known	chr12	+	6370	25	FSM	ENSG00000184575.12	ENST00000332707.10	6370	25	0	0	0	0	multi-exon	FALSE	canonical	3	1122	junction_10	89.5776257871723	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGAGTGGACTTTTG	-7	True	NA	20	True	AATAAA	-20	NA	64404391	64451125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64404805_64409961_64410096_64414906_64414990_64416697_64416755_64418045_64418116_64418875_64419095_64420069_64420255_64420352_64420522_64421234_64421472_64423004_64423044_64423181_64423245_64424598_64424724_64425037_64425183_64425337_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537_64431824_64433413_64433604_64434506_64434624_64434793_64434910_64435626_64435675_64439243_64439316_64445074_64445132_64448104
transcript_33758.known	chr12	+	3092	22	FSM	ENSG00000183735.11	ENST00000652537.1	3092	22	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_16	63.7491185302094	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTTCTTTAATTCTG	-35	True	NA	-51	True	ATTAAA	-30	NA	64452091	64502048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64495981_64496090_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_33759.known	chr12	+	3022	21	FSM	ENSG00000183735.11	ENST00000331710.10	3022	21	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	19.3480619184455	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCATGTGTTTCTTTGT	-7	True	NA	15	True	AATAAA	-21	NA	64452119	64502114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_33761.known	chr12	+	3204	20	FSM	ENSG00000183735.11	ENST00000676654.1	3204	20	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_7	19.8491541297757	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTAATTCTGCTTAC	-37	True	NA	-46	True	ATTAAA	-35	NA	64452089	64502053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64498040_64501329
transcript_33764.known	chr12	+	1261	4	FSM	ENSG00000183735.11	ENST00000678430.1	1261	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	18.006171781426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGCAAGAATATGGAG	-7	True	NA	NA	False	AAAACA	-2	NA	64452119	64465267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333
transcript_33766.known	chr12	+	1075	2	FSM	ENSG00000183735.11	ENST00000679065.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTGTTTAGATTCAAT	2	True	NA	NA	False	ATTAAA	-14	NA	64452128	64456855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839
transcript_33767.known	chr12	+	2956	21	FSM	ENSG00000183735.11	ENST00000676912.1	2956	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	50.2568154582043	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAATGTAAAGAGTTC	-13	True	NA	1	True	AATAAA	-7	NA	64452113	64502100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460246_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_33768.known	chr12	+	2944	20	FSM	ENSG00000183735.11	ENST00000652657.1	2944	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	52.0736746353443	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAATGTAAAGAGTTC	-15	True	NA	1	True	AATAAA	-7	NA	64452111	64502100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64501329
transcript_33769.known	chr12	-	254	2	FSM	ENSG00000256670.1	ENST00000546135.1	254	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTTGAGATTTAACC	2620	False	NA	NA	False	AATAAA	-16	NA	64609459	64599077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64599217_64609344
transcript_33770.known	chr12	+	7764	12	FSM	ENSG00000111490.15	ENST00000539867.6	7764	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.41289840091584	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTAGTAATTGTTTTCT	7	True	NA	NA	False	AATAAA	-8	NA	64824646	64881033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64825034_64827834_64827897_64828443_64828510_64830376_64830503_64832118_64832305_64836489_64836659_64838682_64838852_64843379_64843486_64864667_64864781_64866763_64866904_64870601_64870809_64875000
transcript_33771.nic	chr12	+	772	4	NIC	ENSG00000111490.15	novel	5320	14	NA	NA	4	108	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.35702260395516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATATGGTCAATATCA	395	False	NA	2	True	AATAAA	-16	NA	64759487	64818878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_64759650_64785880_64786046_64787359_64787382_64818455
transcript_33773.known	chr12	+	6883	17	FSM	ENSG00000288591.1	ENST00000674281.1	6883	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.4972822875669	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATCTATTACTTCACC	403	False	NA	NA	False	AATAAA	-8	NA	64759495	64977509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64759650_64785880_64786046_64787359_64787382_64827834_64827897_64828443_64828510_64830376_64830503_64832118_64832305_64836489_64836659_64838682_64838852_64843379_64843486_64864667_64864781_64866763_64866904_64870601_64870809_64875000_64876936_64883648_64883866_64885193_64885301_64974570
transcript_33777.nnic	chr12	-	1473	3	NNC	ENSG00000248995.2	novel	447	3	NA	NA	-10377	-36280	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAAAATCAC	NA	False	NA	NA	False	AAAAAG	-8	NA	64992901	64957124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_64957858_64982407_64982523_64992276
transcript_33780.known	chr12	-	1977	10	FSM	ENSG00000156076.10	ENST00000286574.9	1977	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	6.05530070819498	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTGGAGGTGATCT	6	True	NA	-3	True	AATAAA	-22	NA	65121305	65050625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_65051471_65055117_65055214_65056030_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
transcript_33782.known	chr12	+	4780	13	FSM	ENSG00000174106.3	ENST00000308330.3	4780	13	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_4	11.823939933692	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTGCCCTGTGTCTG	11	True	NA	55	True	ATTAAA	-44	NA	65169582	65248355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_65171119_65210925_65210964_65215976_65216044_65218551_65218620_65238501_65238582_65238668_65238815_65239928_65240031_65240135_65240239_65240908_65241088_65243387_65243470_65245668_65245775_65245860_65245940_65246161
transcript_33785.known	chr12	+	4377	7	FSM	ENSG00000174099.12	ENST00000308259.10	4377	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.3392781412697	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTTTGATTCCTGA	-36	True	NA	NA	False	AATAAA	-18	NA	65278682	65466907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_65278866_65308528_65308656_65326825_65326935_65328525_65328604_65368997_65369027_65453727_65453826_65463154
transcript_33786.known	chr12	+	4290	6	FSM	ENSG00000174099.12	ENST00000355192.8	4290	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.85472369909914	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTTTGATTCCTGA	85	False	NA	NA	False	AATAAA	-18	NA	65278642	65466907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_65278866_65326825_65326935_65328525_65328604_65368997_65369027_65453727_65453826_65463154
transcript_33788.known	chr12	+	611	5	FSM	ENSG00000149948.14	ENST00000393577.7	611	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	15.3195136998535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTCATTGCTGCTCCC	40	False	NA	NA	False	AATAAA	-23	NA	65825122	65952536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65951382_65951416_65952355
transcript_33789.known	chr12	+	1993	4	FSM	ENSG00000149948.14	ENST00000393578.7	1993	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	14.1656862405839	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGGTTTTGGAATTCT	11	True	NA	NA	False	AATAAA	-15	NA	65824459	65843523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65842590
transcript_3379.known	chr1	+	7883	12	FSM	ENSG00000162521.19	ENST00000373493.10	7883	12	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_9	132.830594902488	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATCTGTTTCTTTTTTT	-1	True	NA	NA	False	AATAAA	-16	NA	32651207	32686211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
transcript_33790.known	chr12	-	1144	2	FSM	ENSG00000241749.4	ENST00000489520.2	1144	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAGTCATCCTAAGTC	-8	True	NA	NA	False	AATAAA	-44	NA	65826974	65758019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_65759032_65826842
transcript_33791.known	chr12	-	1023	1	FSM	ENSG00000241749.4	ENST00000622976.1	1023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTCTCCATGCGTTCT	NA	False	NA	NA	False	AAAAAG	-10	NA	65826997	65825974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_65826000_65827000
transcript_33793.known	chr12	-	1303	8	FSM	ENSG00000155957.19	ENST00000545407.5	1303	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	130.414410121531	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAATACTGTTACAAT	-4	True	NA	-25	True	AATAAA	-12	NA	66169980	66137841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66168914_66169354_66169854
transcript_33795.known	chr12	-	770	7	FSM	ENSG00000155957.19	ENST00000542724.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	110.584432297981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGAGAAAAAAGGATT	-23	True	NA	-103	True	ATTAAA	-36	NA	66169999	66137919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138735_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_33796.known	chr12	-	876	7	FSM	ENSG00000155957.19	ENST00000633367.1	876	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	106.826962888589	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATACTGTTACAATCTT	-5	True	NA	-22	True	AATAAA	-15	NA	66170027	66137838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153411_66169854
transcript_33797.known	chr12	-	2240	7	FSM	ENSG00000155957.19	ENST00000544599.5	2240	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	108.660659343154	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTATGGTTTCATTTG	548	False	NA	-2	True	ATTAAA	-15	NA	66169511	66136936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66168914
transcript_33798.known	chr12	-	2876	7	FSM	ENSG00000155957.19	ENST00000358230.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	20.0637871688163	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAAGCACATCTTGCA	-20	True	NA	NA	False	NA	NA	NA	66169996	66135845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_33801.known	chr12	-	844	6	FSM	ENSG00000155957.19	ENST00000398033.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.543104323723	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTACAATCTTTATTT	-22	True	NA	-17	True	AATAAA	-20	NA	66169998	66137833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_33802.known	chr12	-	409	5	FSM	ENSG00000155957.19	ENST00000545504.1	409	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	123.390386578534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTCATCATCTATGAC	55	False	NA	NA	False	NA	NA	NA	66170004	66138105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66169854
transcript_33805.known	chr12	-	1177	3	FSM	ENSG00000139233.7	ENST00000446587.2	1177	3	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_2	302	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAATTAGCCGGGCA	7450	False	NA	NA	False	AATACA	-23	NA	66130702	66123306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66124019_66128895_66129114_66130455
transcript_33809.known	chr12	-	220	2	FSM	ENSG00000155957.19	ENST00000542072.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCCGCCCTGTCTGGGA	-13	True	NA	NA	False	NA	NA	NA	66169989	66161087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66161173_66169854
transcript_3381.known	chr1	+	1417	12	FSM	ENSG00000162521.19	ENST00000373485.5	1417	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	591.445071606208	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATGGGTTTTATTTA	25	True	NA	30	True	AATAAA	-21	NA	32651233	32680657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32680525
transcript_33810.known	chr12	-	7728	3	FSM	ENSG00000139233.7	ENST00000266604.7	7728	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	60	2315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATCTGCATACCTT	-1	True	NA	-13	True	AATAAA	-17	NA	66130750	66116554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66124019_66128895_66129114_66130704
transcript_33811.known	chr12	-	989	8	FSM	ENSG00000155957.19	ENST00000286424.12	989	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	130.63737003239	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATACTGTTACAATCT	14	True	NA	-23	True	AATAAA	-14	NA	66169962	66137839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66160164_66160306_66169854
transcript_33812.known	chr12	-	851	9	NNC	ENSG00000155957.19	novel	989	8	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	143.143066545327	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTACAATCTTTATTT	13	True	NA	-17	True	AATAAA	-20	NA	66169963	66137833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_66138055_66138055_66138166_66138723_66138743_66138744_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_33814.known	chr12	+	3167	12	FSM	ENSG00000127311.10	ENST00000440906.6	3167	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	3.14655787270487	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCGTAACGTCAAAGTACCAA	6	True	NA	NA	False	AATGAA	-3	NA	66302578	66338158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_66302791_66304730_66305151_66306344_66306515_66309705_66310609_66315241_66315384_66318637_66318793_66321947_66322030_66322723_66322784_66323982_66324212_66324982_66325127_66331153_66331646_66338000
transcript_33818.known	chr12	+	11176	15	FSM	ENSG00000111530.13	ENST00000545606.6	11176	15	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_6	85.9971819661694	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGCCATCTTGAAGCA	-19	True	NA	11	True	AATAAA	-16	NA	67269357	67319953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_67269786_67281909_67282054_67292621_67292777_67295032_67295157_67297406_67297664_67297747_67297854_67298949_67299096_67302322_67302616_67304604_67304747_67305103_67306598_67307396_67307493_67309900_67310071_67310151_67310317_67311692_67311801_67312605
transcript_33820.known	chr12	+	772	3	FSM	ENSG00000111530.13	ENST00000539434.1	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	822	junction_1	29	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTGTGGAATAGTTCAG	41	False	NA	NA	False	NA	NA	NA	67269725	67293189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_67269786_67281909_67282054_67292621
transcript_33822.known	chr12	-	2472	14	FSM	ENSG00000111554.15	ENST00000411698.6	2472	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	27.4446187911531	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATTTGTTGTTCCT	18	True	NA	-47	True	NA	NA	NA	68332286	68294862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68326656_68327022_68331106_68331222_68332227
transcript_33824.known	chr12	-	2918	14	FSM	ENSG00000111554.15	ENST00000303145.11	2918	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	10.4411566159736	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTCTCCAGAAAG	-28	True	NA	-2	True	AATAAA	-14	NA	68332332	68294567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_33828.nic	chr12	-	1389	9	ISM	ENSG00000111554.15	ENST00000303145.11	2918	14	-63	20640	-14	-192	5prime_fragment	FALSE	canonical	3	47	junction_6	12.6830349285965	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATATCGTGGAAGAACA	NA	False	NA	NA	False	AAGAAA	-3	NA	68332395	68315207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_33831.known	chr12	-	2718	3	FSM	ENSG00000111554.15	ENST00000393543.7	2718	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	35.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATACGTAATTTTGT	-20	True	NA	2	True	AATAAA	-22	NA	68332324	68325004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68327511_68331106_68331222_68332227
transcript_33832.known	chr12	-	2170	3	FSM	ENSG00000111554.15	ENST00000430606.3	2170	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	5.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTTATTCTAAAATGT	NA	False	NA	-17	True	ATTAAA	-12	NA	68332381	68325120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68327022_68331106_68331222_68332227
transcript_33837.known	chr12	-	2980	15	FSM	ENSG00000111554.15	ENST00000682720.1	2980	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	23.8588536597881	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTCTCCAGAAAGTT	3	True	NA	0	True	AATAAA	-16	NA	68332362	68294565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_33838.known	chr12	-	554	2	FSM	ENSG00000111554.15	ENST00000541087.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATTAAACAAGTTTTACT	5	True	NA	NA	False	CATAAA	-38	NA	68332255	68330695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68331222_68332227
transcript_33839.known	chr12	+	1072	9	FSM	ENSG00000127314.18	ENST00000537460.5	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	333.600785932827	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGCACATTCTAATCAC	25	True	NA	NA	False	NA	NA	NA	68610907	68659401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611044_68624670_68624874_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_33843.known	chr12	+	13378	8	FSM	ENSG00000127314.18	ENST00000250559.14	13378	8	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_1	73.5271711543371	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATGACTGTATTATT	16	True	NA	NA	False	AATAAA	-23	NA	68610898	68671901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_33846.known	chr12	+	1060	7	FSM	ENSG00000127314.18	ENST00000542145.5	1060	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	285.818561328686	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGCGCTTTGATTAA	-4	True	NA	NA	False	AAGAAA	-23	NA	68610928	68659754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68656305_68656450_68657100_68657218_68659279
transcript_33849.known	chr12	+	977	6	FSM	ENSG00000127314.18	ENST00000539091.5	977	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	337.289549200683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCCAAAGAGCTCCTAT	-4	True	NA	NA	False	AATAAA	-3	NA	68610928	68659647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611053_68648698_68648782_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_33852.known	chr12	+	874	5	FSM	ENSG00000127314.18	ENST00000543393.5	874	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	333.28553824011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATTTTAGCATAATAAAA	-1	True	NA	NA	False	NA	NA	NA	68610918	68659626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611044_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_33853.known	chr12	-	1733	3	FSM	ENSG00000247363.3	ENST00000500695.2	1733	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTATTTCTGTCATAAAA	-22	True	NA	NA	False	AATAAA	-16	NA	68686859	68674370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68675822_68685858_68686018_68686736
transcript_33857.known	chr12	+	6213	28	FSM	ENSG00000111581.10	ENST00000229179.9	6213	28	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_19	85.0500215922342	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAATAAGTTCTTTCCC	-14	True	NA	10	True	AATAAA	-14	NA	68686977	68745809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_33858.known	chr12	+	2859	26	FSM	ENSG00000111581.10	ENST00000378905.6	2859	26	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_20	195.292781228595	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGTCTCTTTTTCATG	2377	False	NA	29	True	AATAAA	-40	NA	68686950	68742692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_33861.known	chr12	+	3728	5	FSM	ENSG00000175782.11	ENST00000319429.7	3728	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	55.4639522572995	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCTTGGGAAGATCCT	12	True	NA	NA	False	AATAAA	-18	NA	68746134	68762769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68760039
transcript_33863.known	chr12	+	17722	5	FSM	ENSG00000175782.11	ENST00000398004.4	17722	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	12.1449578014911	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGTTTCTTTCATTAAT	9	True	NA	NA	False	AATAAA	-17	NA	68746175	68781468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68746780_68747929_68748041_68752031_68752191_68759156_68759240_68764703
transcript_33869.known	chr12	+	3522	5	FSM	ENSG00000175782.11	ENST00000674096.1	3522	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	76.2540982505203	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTTCTGCTTTTCAT	2	True	NA	NA	False	AATACA	-35	NA	68746124	68767158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156_68759240_68764703
transcript_3387.known	chr1	+	762	4	FSM	ENSG00000162521.19	ENST00000401893.7	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	139.452102490027	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGTGCTGTTTAAGCA	1	True	NA	NA	False	NA	NA	NA	32651209	32668579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224
transcript_33876.known	chr12	-	6627	9	FSM	ENSG00000135678.12	ENST00000551568.6	6627	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.11763429326218	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTTTTCCCATTAT	15	True	NA	NA	False	AATAAA	-20	NA	68933171	68851174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68856680_68858922_68859072_68866895_68867049_68869324_68869496_68870214_68870400_68871783_68871957_68885791_68885890_68932677_68932841_68933141
transcript_3388.known	chr1	+	501	3	FSM	ENSG00000162521.19	ENST00000525506.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	167	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAAGCCTGAGTTTGCA	9	True	NA	NA	False	AGTAAA	-31	NA	32651217	32657674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913_32652062_32657426
transcript_33884.known	chr12	+	406	2	FSM	ENSG00000135679.27	ENST00000400501.2	406	2	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGATCTTAAATTTTT	401	False	NA	32	True	AATAAA	-28	NA	68843688	68844195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68843833_68843933
transcript_33885.known	chr12	+	2229	11	FSM	ENSG00000111605.18	ENST00000266679.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	418.910778090037	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	14	False	NA	34	True	AATAAA	-14	NA	69239615	69269939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258034_69258146_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_3389.known	chr1	+	690	2	FSM	ENSG00000162521.19	ENST00000465780.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTACAATGAGTCTAGT	17	True	NA	NA	False	AAAAAG	-6	NA	32651225	32652506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913
transcript_33894.known	chr12	+	1915	10	FSM	ENSG00000111605.18	ENST00000456847.7	1915	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	362.923350068153	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	-2	True	NA	34	True	AATAAA	-14	NA	69239599	69269939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257783_69258685_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_33898.known	chr12	+	6584	10	FSM	ENSG00000111605.18	ENST00000435070.7	6584	10	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_5	85.6527586346663	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTTTGTCTTTTTT	-5	True	NA	13	True	AATAAA	-18	NA	69239568	69274358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_3390.known	chr1	-	395	2	FSM	ENSG00000224409.1	ENST00000421619.1	395	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCCCAGCTACATG	NA	False	NA	NA	False	AATAAA	-25	NA	32725237	32717733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32717969_32725077
transcript_33907.known	chr12	+	234	4	FSM	ENSG00000111605.18	ENST00000551516.1	234	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	544.092108215348	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGTTTGCTTCTTGTG	7	False	NA	-87	True	AAAACA	-29	NA	69239641	69269573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69239707_69251128_69251142_69262468_69262563_69269511
transcript_33914.known	chr12	+	1490	4	FSM	ENSG00000090382.7	ENST00000261267.7	1490	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGTCTGTTTTTATTT	-1	True	NA	NA	False	ATTAAA	-15	NA	69348380	69354234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69348545_69350107_69350273_69352219_69352299_69353152
transcript_33919.known	chr12	+	1100	5	FSM	ENSG00000127337.7	ENST00000548020.5	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	132.944302247219	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATAAAGTATTACTTGT	-23	True	NA	NA	False	NA	NA	NA	69359709	69390631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69360024_69362787_69362908_69370705_69370799_69370887_69370976_69390146
transcript_33920.known	chr12	+	428	2	FSM	ENSG00000127337.7	ENST00000552949.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTAATTTGTTTTGCTT	23	True	NA	NA	False	NA	NA	NA	69359755	69362947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69360024_69362787
transcript_33927.known	chr12	+	6768	9	FSM	ENSG00000166225.9	ENST00000549921.6	6768	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_8	38.5899922259645	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTGTATTTATATTT	-18	True	NA	20	True	AATAAA	-38	NA	69470387	69579793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69470531_69530864_69530961_69532013_69532057_69562179_69562275_69569004_69569097_69570330_69570518_69571275_69571435_69572117_69572282_69574004
transcript_3393.nic	chr1	+	672	4	ISM	ENSG00000162522.11	ENST00000294521.7	878	5	-7	4302	-7	-51	5prime_fragment	FALSE	canonical	3	12	junction_1	33.7276675083759	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTACCCTGTGTCCTCTTGC	-4	True	NA	7	True	AATGAA	-13	NA	32765626	32768895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_32765828_32767786_32767958_32768061_32768118_32768651
transcript_3394.nic	chr1	+	1048	4	ISM	ENSG00000162522.11	ENST00000294521.7	878	5	-7	3926	-7	325	5prime_fragment	FALSE	canonical	3	12	junction_1	33.7276675083759	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAGAAAATCTTAACTG	-4	True	NA	-11	True	AATAAA	-5	NA	32765626	32769271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_32765828_32767786_32767958_32768061_32768118_32768651
transcript_33943.known	chr12	+	1916	16	FSM	ENSG00000166226.13	ENST00000299300.11	1916	16	0	0	0	0	multi-exon	TRUE	canonical	3	1949	junction_8	202.870796321205	12871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCTTATGTCTTATA	7	True	NA	29	True	AATAAA	-15	NA	69585458	69601570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
transcript_33944.known	chr12	+	683	6	FSM	ENSG00000166226.13	ENST00000550638.5	683	6	0	0	0	0	multi-exon	TRUE	canonical	3	2318	junction_4	44.0299897796945	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTTAGTCTTTTTGTA	7	True	NA	NA	False	ACTAAA	-10	NA	69585458	69588436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149
transcript_33945.known	chr12	+	1754	15	FSM	ENSG00000166226.13	ENST00000550010.5	1754	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	640.565247835608	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTTCTCATACTGTGC	20	True	NA	-16	True	TTTAAA	-4	NA	69585471	69601525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69598321_69598422_69599862_69600005_69601294
transcript_33946.nic	chr12	+	1978	16	ISM	ENSG00000166268.11	ENST00000552032.7	3590	25	71785	374	-29563	0	3prime_fragment	FALSE	canonical	0	0	junction_3	2.95446930748805	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATGTGATGTTTGATT	NA	False	NA	NA	False	AATAAA	-18	NA	69897011	69958723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_69897247_69903643_69903845_69909968_69910078_69910820_69910931_69926570_69926735_69927684_69927749_69932512_69932599_69936112_69936188_69936282_69936336_69936452_69936633_69952112_69952176_69952798_69952887_69955362_69955438_69957821_69957943_69958248_69958324_69958444
transcript_3395.known	chr1	+	878	5	FSM	ENSG00000162522.11	ENST00000294521.7	878	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	38.4276918380482	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTTGGGAGCAGGACA	3	True	NA	NA	False	NA	NA	NA	32765633	32773197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32765828_32767786_32767958_32768061_32768118_32768651_32768776_32772864
transcript_33950.known	chr12	+	2674	9	FSM	ENSG00000127328.22	ENST00000553099.5	2674	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	43.2897216438267	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGATACTGTACGGTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	69778966	69817117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69779097_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_33951.known	chr12	+	2840	9	FSM	ENSG00000127328.22	ENST00000551641.5	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	38.4283017449379	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGATAAATAAAAAGT	NA	False	NA	NA	False	AAAAAG	-15	NA	69778949	69817181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69779182_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_33958.known	chr12	+	1613	9	FSM	ENSG00000127328.22	ENST00000417413.7	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	41.9774865255175	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	-18	True	NA	2	True	AATAAA	-15	NA	69738861	69815723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69812777_69812878_69812963_69813034_69815363
transcript_33959.known	chr12	+	1755	10	FSM	ENSG00000127328.22	ENST00000483530.6	1755	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	37.0798271334551	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	-18	True	NA	2	True	AATAAA	-15	NA	69738861	69815723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812963_69813034_69815363
transcript_3396.known	chr1	+	5294	7	FSM	ENSG00000162522.11	ENST00000373480.1	5294	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	27.7108081601546	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGCTACTGCTTCTTA	36	False	NA	14	True	ATTAAA	-14	NA	32765666	32774970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32765828_32767786_32767958_32768061_32768118_32768651_32768776_32769672_32769787_32769879_32772442_32772864
transcript_33960.known	chr12	+	2386	6	FSM	ENSG00000127328.22	ENST00000378815.10	2386	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	7.1386273190299	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAGTTCAATACTTGG	-18	True	NA	NA	False	AATAAA	-15	NA	69738861	69796647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140
transcript_33961.known	chr12	+	438	2	FSM	ENSG00000127328.22	ENST00000547055.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTATCAGATTATTTAAA	908	False	NA	NA	False	AATAAA	-17	NA	69756522	69785016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69756664_69784719
transcript_33969.nic	chr12	-	799	3	FSM	ENSG00000257815.8	ENST00000686072.1	834	3	15	20	0	0	multi-exon	FALSE	canonical	3	8	junction_2	21	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-27	True	NA	-15	True	AATAAA	-14	NA	70243383	70242305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70242894_70243065_70243205_70243311
transcript_33970.nic	chr12	-	616	3	FSM	ENSG00000257815.8	ENST00000686072.1	834	3	15	203	0	0	multi-exon	FALSE	canonical	3	8	junction_2	21	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTTATTTCCTTGTA	-27	True	NA	NA	False	ATTAAA	-20	NA	70243383	70242488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70242894_70243065_70243205_70243311
transcript_33972.known	chr12	-	883	2	FSM	ENSG00000257815.8	ENST00000549651.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-4	True	NA	-15	True	AATAAA	-14	NA	70243360	70242305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70242894_70243065
transcript_33973.known	chr12	-	452	2	FSM	ENSG00000257815.8	ENST00000553135.2	683	2	28	203	2	0	multi-exon	FALSE	canonical	3	17	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTTATTTCCTTGTA	-2	True	NA	NA	False	ATTAAA	-20	NA	70243358	70242488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70242894_70243311
transcript_33978.known	chr12	+	2288	16	FSM	ENSG00000111596.14	ENST00000551043.5	2288	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	138.305876793271	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	70243750	70353913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_70244323_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_33985.nic	chr12	+	1150	4	NIC	ENSG00000135643.5	novel	4717	3	NA	NA	437	333	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	92.6534762794503	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTATTTCCTTTTTTAT	119	False	NA	25	True	ATTAAA	-19	NA	70366726	70431019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_70367071_70400208_70400337_70422706_70422850_70430484
transcript_33986.known	chr12	+	4717	3	FSM	ENSG00000135643.5	ENST00000258111.5	4717	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	18.5	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTGTGTGGCATT	-2	True	NA	15	True	AATAAA	-15	NA	70366289	70434292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_70367071_70400208_70400337_70430484
transcript_3399.known	chr1	-	2075	11	FSM	ENSG00000134684.12	ENST00000674629.1	2075	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	347.176093647014	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCACTGTCATAAAT	-7	True	NA	-77	True	NA	NA	NA	32817357	32775282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32817187
transcript_33991.nnic	chr12	-	785	4	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-365	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	10.6770782520313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTGTCTGGGCGACT	NA	False	NA	-3	True	AATAAA	-20	NA	71118612	71047401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_71047680_71115849_71115959_71118069_71118187_71118331
transcript_33992.nnic	chr12	-	679	4	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-299	-62814	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	12.0830459735946	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118546	71110215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_71110454_71115849_71115959_71118069_71118187_71118331
transcript_33993.nnic	chr12	-	962	4	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-365	-62814	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.5566238822398	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118612	71110215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_71110671_71115849_71115959_71118069_71118187_71118331
transcript_33996.known	chr12	-	565	3	FSM	ENSG00000258053.1	ENST00000549357.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	10.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTGTCTGGGCGACT	NA	False	NA	-3	True	AATAAA	-20	NA	71118247	71047401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_71047680_71115849_71115959_71118069
transcript_33998.nnic	chr12	-	876	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-351	-62814	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.5	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118598	71110215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_71110454_71115849_71115959_71118069
transcript_33999.nnic	chr12	-	1093	3	NNC	ENSG00000258053.1	novel	565	3	NA	NA	-351	-62814	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	12.5	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCAAGTCCGTGTGACC	NA	False	NA	-6	True	AATAAA	-17	NA	71118598	71110215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_71110671_71115849_71115959_71118069
transcript_34.known	ERCC-00077	+	258	1	FSM	ERCC-00077A	DQ516742	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATAAA	-33	NA	0	258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00077_+_0_300
transcript_34007.nnic	chr12	+	879	5	NNC	ENSG00000139292.13	novel	4583	18	NA	NA	-669	-27565	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	31.2609980646812	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAAATGCTCATCCAA	-2	True	NA	NA	False	AATAAA	-1	NA	71439128	71545462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_71439320_71504613_71504686_71524405_71524478_71535114_71535187_71544990
transcript_34008.known	chr12	-	7037	35	FSM	ENSG00000133858.17	ENST00000378743.9	7037	35	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_27	14.9539084243093	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTGTCTTTATTCAC	-7	True	NA	-3	True	AATATA	-18	NA	71663848	71609598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_71610566_71610694_71610758_71611057_71611098_71611785_71611888_71613334_71613436_71614534_71614701_71614833_71614939_71615205_71615317_71619314_71619410_71619925_71620125_71620209_71620316_71623359_71623598_71624103_71624293_71626259_71626447_71627750_71627935_71628917_71629038_71629608_71629711_71630599_71630722_71630822_71630955_71631777_71631888_71631971_71632515_71632885_71633018_71633263_71633439_71634154_71634305_71634703_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_34009.nic	chr12	-	2557	11	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-80	25098	-41	-2573	5prime_fragment	FALSE	canonical	3	73	junction_3	15.205591076969	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTGAAAAAGAAAATGATCC	NA	False	NA	-1	True	NA	NA	NA	71663899	71634795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_34015.nnic	chr12	+	1348	8	NNC	ENSG00000139291.14	novel	5662	6	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	50.9697789611348	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	0	True	NA	NA	False	AATAAA	-19	NA	71686086	71704056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_71686321_71686687_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71701026_71703976
transcript_34018.nic	chr12	+	1575	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_6	46.8887572404682	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	-7	True	NA	NA	False	AATAAA	-19	NA	71686079	71704056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71703976
transcript_34019.nic	chr12	+	1722	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	22	junction_6	38.9272826348479	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	-7	True	NA	NA	False	AATAAA	-19	NA	71686079	71704056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71701026_71703976
transcript_34023.known	chr12	+	5662	6	FSM	ENSG00000139291.14	ENST00000266673.10	5662	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.1785508899857	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCTACCTGAATTTCT	-5	True	NA	NA	False	AATACA	-14	NA	71686081	71705047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831
transcript_34026.nic	chr12	-	1680	5	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-80	34509	-41	707	5prime_fragment	FALSE	canonical	3	74	junction_2	6.29980158417708	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGAAAAGAGAGGAAG	NA	False	NA	1	True	NA	NA	NA	71663899	71644206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_34029.nic	chr12	-	1531	4	ISM	ENSG00000133858.17	ENST00000552994.5	7597	34	-80	35216	-41	0	5prime_fragment	FALSE	canonical	3	74	junction_1	5.71547606649408	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAACACATTCGGCCAA	NA	False	NA	NA	False	AAAAAG	-12	NA	71663899	71644913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_71645076_71647748_71647814_71656884_71657302_71663012
transcript_34030.known	chr12	+	4432	3	FSM	ENSG00000173451.7	ENST00000308086.3	4432	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCATGCCTGTTATT	0	True	NA	8	True	ATTAAA	-19	NA	71664300	71680644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71664581_71674202_71674399_71676688
transcript_34034.known	chr12	+	672	2	FSM	ENSG00000173451.7	ENST00000547843.1	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATGTTTCTGTTTTT	101	False	NA	NA	False	ATTAAA	-21	NA	71664480	71665440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71664581_71664868
transcript_34035.known	chr12	-	1771	2	FSM	ENSG00000133858.17	ENST00000548100.1	1771	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGATTTGGCTTGTTTT	-16	True	NA	NA	False	AATACA	-24	NA	71663824	71656342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_71657302_71663012
transcript_34037.known	chr12	-	1484	3	FSM	ENSG00000133858.17	ENST00000552037.1	1484	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGGATTTGGCTTGTTTT	20	False	NA	NA	False	AATACA	-24	NA	71663858	71656342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_71656564_71656884_71657302_71663012
transcript_34039.known	chr12	+	404	2	FSM	ENSG00000080371.6	ENST00000552686.1	404	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAGACAGAACAAAA	NA	False	NA	NA	False	NA	NA	NA	71782413	71785689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71782659_71785530
transcript_34041.known	chr12	+	6184	18	FSM	ENSG00000121749.16	ENST00000550746.5	6184	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	41.1689909173007	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTTCCATCAGTACCT	4525	False	NA	NA	False	ATTAAA	-14	NA	71839717	71927248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894324_71894376_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_34047.known	chr12	+	3157	17	FSM	ENSG00000121749.16	ENST00000485960.7	3157	17	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	14.2553443925427	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTTTAGTTAAATT	-8	True	NA	10	True	AATAAA	-13	NA	71839758	71924313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_34053.known	chr12	+	1995	16	FSM	ENSG00000121749.16	ENST00000462788.6	1995	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	32.7162888414251	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTATTTTTGTAGTTAC	-8	True	NA	12	True	ATTAAA	-19	NA	71839758	71923362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_34059.known	chr12	+	582	6	FSM	ENSG00000121749.16	ENST00000474468.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	51.7238822982189	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGGTTTAATACAAGT	-8	True	NA	NA	False	NA	NA	NA	71839758	71893306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71839812_71841100_71841232_71872069_71872169_71872928_71873004_71880468_71880608_71893221
transcript_34064.known	chr12	-	3088	3	FSM	ENSG00000236333.4	ENST00000655489.1	3088	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTAAGTGTGTGTCTG	2670	False	NA	NA	False	AATAAA	-3	NA	72272236	72259576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_72262111_72264481_72264622_72271822
transcript_34065.known	chr12	-	838	1	FSM	ENSG00000251138.7	ENST00000548427.1	838	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTGATAATATTTAT	NA	False	NA	NA	False	ATTAAA	-22	NA	74292944	74292106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_74292100_74292900
transcript_34069.nnic	chr12	-	1164	3	NNC	ENSG00000180881.20	novel	3831	18	NA	NA	-1	-16423	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACATCAGTTAGCATTAGA	-8	True	NA	NA	False	AAAAAG	-3	NA	75390911	75339358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_75340394_75341063_75341119_75390837
transcript_34072.known	chr12	-	1209	2	FSM	ENSG00000180881.20	ENST00000548958.2	1209	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTTGGGTATTTCT	-7	True	NA	NA	False	ATTAAA	-20	NA	75390910	75359883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_75361020_75390837
transcript_34076.known	chr12	+	404	3	FSM	ENSG00000173401.10	ENST00000547144.1	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	3	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCCATATGTGTATC	-5	True	NA	NA	False	AATAAA	-22	NA	75366936	75370384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75367014_75369959_75369987_75370084
transcript_34078.known	chr12	+	484	2	FSM	ENSG00000173401.10	ENST00000548623.1	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCATATGTGTATCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	75366832	75370387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75367014_75370084
transcript_34080.known	chr12	+	1903	7	FSM	ENSG00000180481.11	ENST00000378692.7	1903	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTGTTATTCAATAGG	5	True	NA	NA	False	AATAAA	-19	NA	75391100	75431883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75391351_75403016_75403147_75410433_75410680_75413597_75413702_75422903_75422990_75430714_75430742_75430823
transcript_34081.known	chr12	+	2590	6	FSM	ENSG00000180481.11	ENST00000550916.6	2590	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATGTTTCTGTTTGGT	-7	True	NA	NA	False	ATTAAA	-24	NA	75391088	75432688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75391351_75410433_75410680_75413597_75413702_75422903_75422990_75430714_75430742_75430823
transcript_34085.known	chr12	+	5812	6	FSM	ENSG00000139278.10	ENST00000266659.8	5812	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.28035085019828	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATTCTCCTTCATATGAA	-3	True	NA	NA	False	AATAAA	-24	NA	75480754	75503863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75481055_75481833_75482080_75490405_75490519_75495576_75495663_75498693_75498721_75498823
transcript_34086.known	chr12	-	5913	2	FSM	ENSG00000139289.14	ENST00000619060.1	5913	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGACCTTTTGAAGGC	782	False	NA	-15	True	AATAAA	-22	NA	76031776	76025446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76030093_76030509
transcript_34102.known	chr12	-	1597	12	FSM	ENSG00000187109.15	ENST00000544816.5	1597	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	679.248843749871	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTGGCAAGAC	887	False	NA	NA	False	NA	NA	NA	76084731	76047966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76084566
transcript_34105.known	chr12	-	1339	12	FSM	ENSG00000187109.15	ENST00000548044.5	1339	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	676.517663302541	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAATAAATTGCAAAAC	952	False	NA	-32	True	AAAACA	-44	NA	76084666	76049588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76084566
transcript_34119.known	chr12	-	1896	16	FSM	ENSG00000187109.15	ENST00000393263.7	1896	16	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	416.527848875545	5006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGGCCTATTTGTAAT	952	False	NA	51	True	NA	NA	NA	76084666	76047154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_34120.known	chr12	-	13159	15	FSM	ENSG00000187109.15	ENST00000618691.5	13159	15	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_9	291.856487307844	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTACATGTCTTTAA	-5	True	NA	NA	False	ATTAAA	-19	NA	76084685	76036584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_34121.known	chr12	-	1981	14	FSM	ENSG00000187109.15	ENST00000552056.5	1981	14	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_1	527.194147007583	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAGTCATGAGACTTAA	3304	False	NA	NA	False	NA	NA	NA	76068993	76046903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76047719_76048420_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908
transcript_34122.known	chr12	-	2031	13	FSM	ENSG00000187109.15	ENST00000431879.7	2031	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_12	838.234367087551	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTTCTTACAAGATAAT	-5	True	NA	-17	True	AATAAA	-16	NA	76084685	76047594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76060137_76060280_76067370_76067474_76068908_76068995_76084566
transcript_34123.known	chr12	-	1967	13	FSM	ENSG00000187109.15	ENST00000547773.5	1967	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_11	629.88045603026	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTGCAGCTAAAATA	889	False	NA	3	True	NA	NA	NA	76084729	76047631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76074202_76074240_76084566
transcript_34124.known	chr12	-	543	3	FSM	ENSG00000187109.15	ENST00000547969.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	2241	junction_2	45.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTGTGTTGGGAAATT	6705	False	NA	-26	True	AATAAA	-16	NA	76053158	76049433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76049786_76050530_76050654_76053090
transcript_34125.known	chr12	-	818	7	FSM	ENSG00000187109.15	ENST00000548273.5	818	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	799.489142445905	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGGGTTGTACAGGGT	883	False	NA	NA	False	NA	NA	NA	76084735	76053787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76084566
transcript_34126.known	chr12	-	851	9	FSM	ENSG00000187109.15	ENST00000550934.5	851	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	759.845286472845	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAATGTCACTTTGAAA	-5	True	NA	-29	True	AAAAAG	-1	NA	76084685	76053327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_34128.known	chr12	-	3568	2	FSM	ENSG00000179941.9	ENST00000650064.2	3568	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTCATTTTTTTT	10	True	NA	-1	True	AATGAA	-17	NA	76348415	76344473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76347788_76348161
transcript_3413.known	chr1	+	4220	7	FSM	ENSG00000116497.18	ENST00000373475.10	4220	7	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_3	57.5403240248861	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	0	True	NA	20	True	AATAAA	-17	NA	32817652	32858875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
transcript_34131.known	chr12	-	7239	24	FSM	ENSG00000091039.17	ENST00000611266.4	7239	24	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_21	52.7361374110383	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTGATCAAGTGACTT	-3	True	NA	-8	True	AATAAA	-16	NA	76559809	76351799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450989_76459858_76459896_76487509_76487619_76559396
transcript_34134.known	chr12	-	3157	23	FSM	ENSG00000091039.17	ENST00000393250.8	3157	23	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_21	46.0539568565912	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCAAGTTGGTTTGG	-3	True	NA	37	True	NA	NA	NA	76559809	76355835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450980_76487509_76487619_76559396
transcript_34136.nnic	chr12	+	624	4	NNC	ENSG00000257526.2	novel	386	3	NA	NA	-2435	-136	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.62466929133727	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAAGTAGTTCTT	-28	True	NA	NA	False	ATTAAA	-21	NA	76559858	76615431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_76560234_76562294_76562359_76570710_76570767_76615302
transcript_34140.known	chr12	+	800	1	FSM	ENSG00000213272.5	ENST00000484287.2	800	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGCACTGTTGAGCTTTC	NA	False	NA	NA	False	ATTAAA	-10	NA	76599670	76600470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_76599700_76600500
transcript_34141.known	chr12	+	480	1	FSM	ENSG00000243071.1	ENST00000485945.1	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGGTGTTAAAAAAAAA	40	False	NA	NA	False	NA	NA	NA	76660404	76660884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_76660400_76660900
transcript_34142.known	chr12	+	4732	17	FSM	ENSG00000186908.15	ENST00000426126.7	4732	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	11.8578823994843	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCTTATGATTTCAC	0	True	NA	29	True	AATAAA	-14	NA	76764114	76853696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_76764330_76797433_76797538_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815856_76816020_76822405_76822532_76826907_76827051_76828389_76828491_76841981_76842107_76842918_76842982_76845708_76845803_76846595_76846680_76848232_76848391_76849375_76849471_76850846
transcript_3415.known	chr1	+	1688	7	FSM	ENSG00000116497.18	ENST00000531123.5	1688	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	139.787239125115	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTATCTTATTGTCAG	5	True	NA	NA	False	AATAGA	-19	NA	32817574	32843187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827995_32828082_32829963_32830068_32834033_32834062_32842782
transcript_34166.known	chr12	-	908	6	FSM	ENSG00000175183.10	ENST00000311083.10	908	6	0	0	0	0	multi-exon	TRUE	canonical	3	1701	junction_5	64.7907400791193	15544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTCTTTTAATTA	-3	True	NA	-19	True	AATAAA	-19	NA	76879019	76858708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_34167.known	chr12	-	754	6	FSM	ENSG00000175183.10	ENST00000546966.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	676.224400624526	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCCCTGTACTTGGATA	-7	True	NA	NA	False	ACTAAA	-35	NA	76879023	76858841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878962
transcript_34168.known	chr12	-	632	5	FSM	ENSG00000175183.10	ENST00000547435.1	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	1701	junction_4	72.2858907394797	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAGTA	579	False	NA	NA	False	AATGAA	-16	NA	76878985	76859468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_34175.known	chr12	+	4705	11	FSM	ENSG00000067715.14	ENST00000261205.9	4705	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	7.07106781186548	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	-24	True	NA	9	True	AATAAA	-21	NA	78864773	79452008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_34183.known	chr12	+	2718	10	FSM	ENSG00000067715.14	ENST00000552744.5	2718	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31.6290224592603	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAACAACAATTAGCCAT	-3	True	NA	NA	False	AAGAAA	-13	NA	79045630	79450294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_79045827_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_34194.nic	chr12	+	1095	6	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	652	158209	-129	-4054	internal_fragment	FALSE	canonical	3	93	junction_4	7.62627038597505	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGAAACTGGGAAA	663	False	NA	29	True	AAAAAG	-12	NA	78864644	79292070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007
transcript_34196.nic	chr12	+	965	5	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	652	164375	-129	0	internal_fragment	FALSE	canonical	3	93	junction_4	8.46684711093805	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGGGAAGAATGCCA	663	False	NA	19	True	AAAAAG	-24	NA	78864644	79285904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786
transcript_34201.nic	chr12	+	1073	4	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	652	232368	-129	394	internal_fragment	FALSE	canonical	3	95	junction_2	7.58653778449403	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCAGCTTGTATTTAAT	663	False	NA	NA	False	CATAAA	-29	NA	78864644	79217911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502
transcript_34206.nic	chr12	+	633	3	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	652	402948	-129	-170186	internal_fragment	FALSE	canonical	3	95	junction_2	9	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATACTCCAGAATTC	663	False	NA	NA	False	AAGAAA	-11	NA	78864644	79047331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_78865110_78977798_78977932_79047296
transcript_34215.known	chr12	+	3095	12	FSM	ENSG00000067715.14	ENST00000393240.7	3095	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.3682631205454	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAACAAAAACCA	11	True	NA	NA	False	NA	NA	NA	78863992	79450279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_78864336_78864997_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_34217.nnic	chr12	+	2159	4	NNC	ENSG00000257474.5	novel	816	3	NA	NA	-88	1253	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	5.65685424949238	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGACTTTTATGTTATGT	NA	False	NA	14	True	ATTAAA	-26	NA	79540114	79551788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_79540447_79542308_79542392_79546065_79546130_79550108
transcript_34220.nic	chr12	+	1043	4	NIC	ENSG00000257474.5	novel	816	3	NA	NA	-178	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	5.65685424949238	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATTCTGAATGTATA	NA	False	NA	41	True	AATAGA	-34	NA	79540024	79550535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_79540447_79542308_79542392_79546065_79546177_79550108
transcript_34235.known	chr12	+	567	3	FSM	ENSG00000257474.5	ENST00000552167.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	1.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATTCTGAATGTATA	5290	False	NA	41	True	AATAGA	-34	NA	79545529	79550535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_79545559_79546065_79546177_79550108
transcript_34243.known	chr12	-	2925	24	FSM	ENSG00000058272.19	ENST00000550107.5	2925	24	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_12	72.7797256714332	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAGCAAGT	14	True	NA	NA	False	NA	NA	NA	79934931	79775928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_34244.known	chr12	-	443	3	FSM	ENSG00000058272.19	ENST00000550007.1	443	3	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	19	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	NA	False	NA	NA	False	GATAAA	-8	NA	79805816	79797268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_79797396_79798493_79798585_79805591
transcript_34245.known	chr12	+	3234	3	FSM	ENSG00000257557.2	ENST00000552885.2	3234	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCATGTTTTCTTTCTT	NA	False	NA	NA	False	GATAAA	-25	NA	79934900	79942712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_79935659_79938727_79938853_79940361
transcript_34246.known	chr12	-	435	1	FSM	ENSG00000230291.5	ENST00000492623.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTTATATACAAGCTTT	23	False	NA	NA	False	AATACA	-30	NA	80103333	80102898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_80102900_80103300
transcript_34247.known	chr12	+	1329	3	FSM	ENSG00000111046.4	ENST00000228641.4	1329	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGGTCCTAATTTGA	0	True	NA	NA	False	ATTAAA	-19	NA	80707633	80709474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_80708239_80708523_80708615_80708841
transcript_34250.nic	chr12	+	1102	2	NIC	ENSG00000111046.4	novel	1329	3	NA	NA	593	81	intron_retention	FALSE	canonical	3	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGACACCACACAAGCCC	248	False	NA	NA	False	AATAAA	-18	NA	80708226	80709555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_80708615_80708841
transcript_34251.known	chr12	+	1540	3	FSM	ENSG00000111049.4	ENST00000228644.4	1540	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTCATGATCTTT	-2	True	NA	NA	False	AATAAA	-19	NA	80716911	80719671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_80717565_80718357_80718434_80718860
transcript_34253.known	chr12	-	989	7	FSM	ENSG00000111052.8	ENST00000261203.7	989	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_4	47.016545551067	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAACACCTTCTTTCTCTG	498	False	NA	-5	True	TATAAA	-17	NA	80937780	80797574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848098_80848176_80848250_80848323_80889250_80889370_80937640
transcript_34259.known	chr12	-	6121	6	FSM	ENSG00000111052.8	ENST00000552864.6	6121	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	12.3385574521497	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTATTGTTTTCATT	2	True	NA	0	True	AGTAAA	-17	NA	80937934	80792519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848250_80848323_80889250_80889370_80937640
transcript_34264.nic	chr12	-	1061	5	ISM	ENSG00000111052.8	ENST00000261203.7	989	7	-282	47994	-128	-5	5prime_fragment	FALSE	canonical	3	10	junction_2	54.2695817194126	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATTTTTATGTCTCATT	216	False	NA	-3	True	ATTAAA	-17	NA	80938062	80845568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_80845940_80848098_80848176_80848250_80848323_80889250_80889370_80937640
transcript_34266.nic	chr12	-	989	4	ISM	ENSG00000111052.8	ENST00000549417.5	905	5	-358	3875	-128	0	5prime_fragment	FALSE	canonical	3	117	junction_1	1.69967317119759	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTCTCATTTCATT	216	False	NA	2	True	ATTAAA	-22	NA	80938062	80845563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_80845940_80848250_80848323_80889250_80889370_80937640
transcript_34269.nic	chr12	-	938	4	ISM	ENSG00000111052.8	ENST00000549417.5	905	5	-358	3926	-128	-51	5prime_fragment	FALSE	canonical	3	117	junction_1	1.69967317119759	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTTTCTAAGCATTGAT	216	False	NA	-5	True	AATAAA	-19	NA	80938062	80845614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_80845940_80848250_80848323_80889250_80889370_80937640
transcript_34272.known	chr12	-	546	3	FSM	ENSG00000111052.8	ENST00000552093.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTCTCATTTCATT	NA	False	NA	2	True	ATTAAA	-22	NA	80889348	80845563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_80845940_80848250_80848323_80889250
transcript_34273.known	chr12	+	8391	16	FSM	ENSG00000111058.8	ENST00000548058.6	8391	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	10.0044434572288	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTATTTATTTATTGAT	-5	True	NA	NA	False	AATAAA	-21	NA	81078078	81261210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787_81174940_81199340_81199445_81216900_81216997_81220012_81220077_81231056_81231139_81233348_81233472_81253306_81253407_81253494_81253671_81254856
transcript_34282.nic	chr12	-	879	5	NIC	ENSG00000139220.17	novel	582	4	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.03108891324554	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTGATAAAGATCTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	81759578	81675485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_81675653_81676790_81676845_81753972_81754224_81758399_81758508_81759279
transcript_34283.known	chr12	-	984	4	FSM	ENSG00000133773.12	ENST00000548126.1	984	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	103.345160613462	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAATCAGAGCTATCA	7	True	NA	NA	False	AATAAA	-11	NA	82358786	82352846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358678
transcript_34289.known	chr12	-	553	2	FSM	ENSG00000133773.12	ENST00000547758.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAATTAGGGAAACATTT	NA	False	NA	87	True	NA	NA	NA	82358805	82356843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_82357270_82358678
transcript_34290.known	chr12	-	1585	4	FSM	ENSG00000133773.12	ENST00000256151.8	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	36.1509182302316	2514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTCTGAAATTGCATTA	10	True	NA	NA	False	AATAAA	-21	NA	82358387	82352302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358222
transcript_34291.known	chr12	-	2101	2	FSM	ENSG00000133773.12	ENST00000550589.1	2101	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGCTATCAATGAAGCA	2672	False	NA	NA	False	AATAAA	-19	NA	82356121	82352838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_82353313_82354494
transcript_34292.known	chr12	-	600	2	FSM	ENSG00000133773.12	ENST00000552606.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	0	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAGTCACGGTTTAAT	-12	True	NA	74	True	NA	NA	NA	82358409	82356856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_82357270_82358222
transcript_34295.known	chr12	+	2064	12	FSM	ENSG00000127720.8	ENST00000248306.8	2064	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.28260092478945	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGACCTACATTCCTGA	2	True	NA	85	True	AATAAA	-28	NA	82358528	82479239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
transcript_34302.nnic	chr12	+	1889	10	NIC	ENSG00000127720.8	novel	2064	12	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	13.9584922600129	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTATAATCCATTTTT	NA	False	NA	12	True	AATAAA	-17	NA	82358462	82479166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82476643_82476719_82477280_82477353_82478931
transcript_34305.nnic	chr12	+	1000	8	NIC	ENSG00000127720.8	novel	2064	12	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.1872348146738	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTATAATCCATTTTT	0	True	NA	12	True	AATAAA	-17	NA	82358499	82479166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_82358825_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
transcript_34309.known	chr12	+	743	4	FSM	ENSG00000127720.8	ENST00000548200.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	4.32049379893857	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGGCAAAAGAAAG	13	True	NA	NA	False	NA	NA	NA	82358539	82398980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794
transcript_34316.nnic	chr12	+	426	3	NNC	ENSG00000257729.2	novel	534	3	NA	NA	-469	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATTTCTTCCACATGT	51	False	NA	NA	False	AATAAA	-17	NA	84270870	84294556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_84270991_84271347_84271407_84294309
transcript_34317.known	chr12	-	4927	13	FSM	ENSG00000072041.18	ENST00000681220.1	4927	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	72.2074076686196	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTAAGGTGTACAATAT	-8	True	NA	-15	True	AATAAA	-5	NA	84912805	84859504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84862007_84863438_84863602_84864849_84864986_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_34320.known	chr12	-	4312	5	FSM	ENSG00000072041.18	ENST00000450363.4	4312	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	17.8518206354422	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGTTTTCGATTTT	9903	False	NA	0	True	AATAAA	-22	NA	84912876	84880844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_34326.known	chr12	-	1831	2	FSM	ENSG00000072041.18	ENST00000681628.1	1831	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTAATCTACAAACCCT	-10	True	NA	-44	True	NA	NA	NA	84912839	84890794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84892309_84912522
transcript_34327.known	chr12	-	3307	2	FSM	ENSG00000072041.18	ENST00000680067.1	3307	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACCAAGGAATATCATAC	-16	True	NA	NA	False	AATATA	-9	NA	84912763	84908937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84912004_84912522
transcript_34328.nnic	chr12	+	222	2	Antisense	novelGene_ENSG00000231738.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAATGTGTATAAAGAAT	NA	False	NA	6	True	AATAAA	-17	NA	85004418	85015044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_85004520_85014923
transcript_34332.known	chr12	+	4464	17	FSM	ENSG00000133640.20	ENST00000525971.6	4464	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.36746844825605	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTATTTTCATTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	85036313	85124858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85036408_85038152_85038309_85040489_85040602_85044717_85044810_85046019_85046138_85047246_85047471_85052176_85052252_85055546_85057185_85065261_85065415_85066747_85066899_85072906_85073099_85098354_85098549_85098866_85098995_85104003_85104078_85106521_85106616_85121696_85121877_85124069
transcript_34337.known	chr12	+	1890	6	FSM	ENSG00000133640.20	ENST00000529408.1	1890	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	2.56124969497314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAACACATTAAATT	-18	True	NA	NA	False	AAAAAG	-14	NA	85036339	85048587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85036408_85038149_85038309_85040489_85040602_85044717_85044810_85046019_85046138_85047246
transcript_34339.known	chr12	+	1332	4	FSM	ENSG00000180318.4	ENST00000316824.4	1332	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.63299316185545	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGTTATAGATTGAT	1	True	NA	NA	False	AATAAA	-14	NA	85280219	85301784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85280488_85283571_85283877_85286852_85286982_85301154
transcript_34342.nnic	chr12	+	685	6	NNC	ENSG00000258815.1	novel	519	3	NA	NA	-65	13240	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.489897948556636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTCTGGTTGAATATT	NA	False	NA	NA	False	AGTAAA	-22	NA	85317994	85356152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_85318116_85318957_85318980_85342471_85342720_85353204_85353266_85354991_85355060_85355987
transcript_34347.known	chr12	+	519	3	FSM	ENSG00000258815.1	ENST00000555596.1	519	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTTTGGATGGAAGC	NA	False	NA	NA	False	NA	NA	NA	85318059	85342912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85318116_85318957_85318980_85342471
transcript_34348.known	chr12	-	5515	2	FSM	ENSG00000198774.5	ENST00000361228.5	5515	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATATTGTTTTGGGT	4	True	NA	NA	False	AATAAA	-19	NA	85836409	85800702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_85805963_85836154
transcript_34350.known	chr12	+	1239	4	FSM	ENSG00000133636.11	ENST00000256010.7	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_3	24.9131825880731	1345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCTCTACAGATTTA	0	True	NA	22	True	AATAAA	-24	NA	85874294	85882992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85874477_85876639_85876702_85878344_85878570_85882222
transcript_34355.known	chr12	-	1937	6	FSM	ENSG00000182050.14	ENST00000552808.7	1894	6	0	-43	0	43	multi-exon	FALSE	canonical	0	0	junction_5	11.506519890914	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAATATGAAAGATTTTA	3	True	NA	NA	False	TTTAAA	-37	NA	86256305	85979012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_85980431_85983522_85983671_85989399_85989553_86028103_86028205_86049673_86049724_86256238
transcript_3436.known	chr1	+	345	2	FSM	ENSG00000116497.18	ENST00000477248.1	345	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTGTGTGCTTCACATG	3	True	NA	NA	False	GATAAA	-18	NA	32817655	32818835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817690_32818524
transcript_34361.known	chr12	+	2829	7	FSM	ENSG00000133641.18	ENST00000356891.4	2829	7	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	44.7415417208164	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTCTGAATTTTTTG	-1	True	NA	16	True	AATAAA	-18	NA	88035535	88050160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_34365.known	chr12	+	2740	6	FSM	ENSG00000133641.18	ENST00000550333.5	2740	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	87.3040663428686	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGTCTGAATTTTT	-4	True	NA	14	True	AATAAA	-16	NA	88035504	88050158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_34368.known	chr12	+	1578	5	FSM	ENSG00000133641.18	ENST00000552121.5	1578	5	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	111.730423341183	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCTTCAGAAGCAGCAA	-1	True	NA	NA	False	AGTAAA	-35	NA	88035535	88049225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88046806_88046977_88048233
transcript_34369.known	chr12	+	583	4	FSM	ENSG00000133641.18	ENST00000552803.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	42.3975890299856	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATCAAATTTATGTAAAG	39	False	NA	NA	False	NA	NA	NA	88035609	88043838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598
transcript_3437.known	chr1	+	417	2	FSM	ENSG00000116497.18	ENST00000474103.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGCTGTGTGCTTCAC	85	False	NA	NA	False	GATAAA	-15	NA	32817737	32818832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817847_32818524
transcript_34370.known	chr12	-	1458	6	FSM	ENSG00000198707.17	ENST00000552770.3	1458	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.23832034148352	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGTAACTGTCCTGT	-17	False	NA	NA	False	AGTAAA	-21	NA	88142099	88135852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_34371.known	chr12	+	731	5	FSM	ENSG00000133641.18	ENST00000453037.7	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	97.5945054805853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAGTGATGGCTGTTT	25	False	NA	NA	False	NA	NA	NA	88035561	88046949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88045581_88045780_88046806
transcript_34372.known	chr12	+	7192	14	FSM	ENSG00000139324.12	ENST00000266712.11	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	13.1360653552634	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTGCCCTTTCTTA	0	True	NA	8	True	AATAAA	-19	NA	88142306	88199887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88142488_88148287_88148505_88153290_88153510_88154287_88154388_88160113_88160230_88160678_88160852_88166329_88166583_88172596_88172746_88174606_88174728_88176207_88176320_88188842_88188947_88190452_88190623_88192603_88192831_88194837
transcript_34375.known	chr12	-	5441	10	FSM	ENSG00000049130.16	ENST00000644744.1	5441	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	6.64997911442	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACCCTGTCATTTT	-2	True	NA	NA	False	AATAAA	-19	NA	88580471	88492792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_88497182_88505158_88505236_88506310_88506379_88507027_88507138_88515533_88515618_88516333_88516491_88518696_88518868_88532440_88532504_88545751_88545866_88580263
transcript_34376.known	chr12	-	5737	9	FSM	ENSG00000049130.16	ENST00000347404.10	5737	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	7.72576857018122	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACCCTGTCATTTT	NA	False	NA	NA	False	AATAAA	-19	NA	88580851	88492792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_88497182_88505158_88505236_88506310_88506379_88507027_88507138_88516333_88516491_88518696_88518868_88532440_88532504_88545751_88545866_88580263
transcript_34377.nnic	chr12	+	674	5	NNC	ENSG00000281333.2	novel	493	3	NA	NA	1	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.03112887414927	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCGCATTTCTCAG	-12	True	NA	7	True	AATAAA	-21	NA	88580531	88600599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_88580611_88581996_88582139_88597947_88598002_88598981_88599066_88600284
transcript_3438.known	chr1	-	2443	13	FSM	ENSG00000134684.12	ENST00000373477.9	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_6	107.08106352977	1962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATGTGAGCTGGAC	-8	True	NA	-33	True	AATAAA	-16	NA	32817358	32775238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32810910_32811058_32817187
transcript_34383.nnic	chr12	+	536	3	NNC	ENSG00000281333.2	novel	493	3	NA	NA	1	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	5.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCGCATTTCTCAG	-12	True	NA	7	True	AATAAA	-21	NA	88580531	88600599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_88580611_88581996_88582139_88600284
transcript_34386.nnic	chr12	+	644	3	Antisense	novelGene_ENSG00000246363.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTGTTGCTACATA	NA	False	NA	23	True	AATAAA	-23	NA	89088095	89165141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_89088363_89127328_89127421_89164856
transcript_34389.nnic	chr12	+	530	2	Antisense	novelGene_ENSG00000246363.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGGTGTTGCTACATA	NA	False	NA	23	True	AATAAA	-23	NA	89088117	89165141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_89088363_89164856
transcript_3439.known	chr1	+	706	3	FSM	ENSG00000116497.18	ENST00000482212.1	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	129.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCACCATTTAATCCA	46	False	NA	NA	False	ATTAAA	-39	NA	32817698	32826538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817847_32825312_32825430_32826097
transcript_34392.known	chr12	-	3627	3	FSM	ENSG00000139318.8	ENST00000279488.8	3627	3	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_2	32.5	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGAACGTACTTATAT	-4	True	NA	NA	False	AATAAA	-23	NA	89352501	89347234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89349562_89350587_89351026_89351639
transcript_34395.known	chr12	-	1959	2	FSM	ENSG00000139318.8	ENST00000308385.6	1959	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAATAAAAA	-2	True	NA	-48	True	NA	NA	NA	89352405	89348368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89349562_89351639
transcript_34399.known	chr12	-	3024	12	FSM	ENSG00000139323.14	ENST00000313546.8	3024	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	24.2302999984839	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-17	True	NA	NA	False	AATAAA	-25	NA	89526047	89419717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_3440.known	chr1	-	782	3	FSM	ENSG00000134684.12	ENST00000470377.1	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_1	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTG	NA	False	NA	NA	False	NA	NA	NA	32806580	32790652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32791255_32797762_32797844_32806481
transcript_34400.known	chr12	+	8158	3	FSM	ENSG00000270344.3	ENST00000605233.3	8158	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGCTCCATATAATGA	NA	False	NA	NA	False	AATAAA	-13	NA	89524593	89548005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_89524634_89525576_89525797_89540107
transcript_34407.known	chr12	-	7062	21	FSM	ENSG00000070961.16	ENST00000428670.8	7062	21	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_20	44.9506395950047	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGGA	5	True	NA	-9	True	AATAAA	-24	NA	89708838	89588048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89591296_89599116_89599300_89601325_89601434_89603042_89603255_89603711_89603926_89604154_89604347_89609936_89610044_89610420_89610509_89611192_89611373_89616801_89617040_89619998_89620241_89621548_89621792_89624182_89624398_89626453_89626616_89627677_89627717_89630504_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89708595
transcript_34408.nic	chr12	-	1291	6	NIC	ENSG00000070961.16	novel	7062	21	NA	NA	-59	11319	combination_of_known_junctions	FALSE	canonical	3	195	junction_2	16.7020956768904	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATAACAATTTTCTAT	-18	True	NA	NA	False	AAAAAG	-12	NA	89709359	89630503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89709218
transcript_3441.known	chr1	-	1563	2	FSM	ENSG00000160097.20	ENST00000481487.1	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGTCTTCTGGTAAA	7772	False	NA	-1	True	AATAAA	-19	NA	32864717	32862267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32863777_32864663
transcript_34412.known	chr12	+	2181	4	FSM	ENSG00000245904.5	ENST00000654992.1	2181	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.07106781186548	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAATAGTAAGTGAACA	19	True	NA	NA	False	ATTAAA	-12	NA	92146201	92226557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146244_92146661_92146763_92213832_92214101_92224787
transcript_34413.known	chr12	+	5699	3	FSM	ENSG00000245904.5	ENST00000499685.2	5699	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTATATGTGTACTT	-2	True	NA	NA	False	AATACA	-18	NA	92146180	92189660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146244_92146661_92146763_92184125
transcript_34415.known	chr12	-	504	2	FSM	ENSG00000133639.6	ENST00000552315.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCCAAAAACTACAATATG	613	False	NA	NA	False	NA	NA	NA	92145233	92144117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_92144448_92145059
transcript_34416.nic	chr12	+	417	2	FSM	ENSG00000245904.5	ENST00000685108.1	470	2	1	52	1	0	multi-exon	FALSE	canonical	3	15	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGTAGACATTCAAGT	-1	True	NA	7	True	AATAAA	-30	NA	92146083	92146918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146244_92146661
transcript_34417.nic	chr12	+	469	2	FSM	ENSG00000245904.5	ENST00000685108.1	470	2	1	0	1	0	multi-exon	FALSE	canonical	3	15	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTTAAAAACCAGTGTA	-1	True	NA	59	True	NA	NA	NA	92146083	92146970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146244_92146661
transcript_34418.nic	chr12	+	409	2	FSM	ENSG00000245904.5	ENST00000687274.1	355	2	-2	-52	-2	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTTAAAAACCAGTGTA	-28	True	NA	59	True	NA	NA	NA	92146154	92146970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146255_92146661
transcript_34419.known	chr12	+	472	1	FSM	ENSG00000245904.5	ENST00000618125.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGTAGACATTCAAGT	160	False	NA	7	True	AATAAA	-30	NA	92146446	92146918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146400_92146900
transcript_34420.known	chr12	+	1087	4	FSM	ENSG00000245904.5	ENST00000665784.1	1087	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGAAACTTCAAATA	1	True	NA	NA	False	GATAAA	-22	NA	92146183	92225434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146255_92146661_92146763_92213832_92214101_92224787
transcript_34421.known	chr12	+	10626	2	FSM	ENSG00000205056.9	ENST00000504409.3	10626	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAATTTGGGCTTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	92466450	92492091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92467003_92482017
transcript_34431.known	chr12	-	332	2	FSM	ENSG00000257252.6	ENST00000549806.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGACAGAAGAAAGATCT	242	False	NA	NA	False	NA	NA	NA	93377708	93327995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93328056_93377436
transcript_34432.known	chr12	-	1166	3	FSM	ENSG00000257252.6	ENST00000548890.2	1166	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGCCCAAAAAAAAAAAAAAA	197	False	NA	NA	False	NA	NA	NA	93377753	93316721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93317542_93328026_93328056_93377436
transcript_34433.known	chr12	+	9753	5	FSM	ENSG00000173598.14	ENST00000337179.9	9753	5	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_3	758.87087175619	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	NA	False	NA	NA	False	AGTAAA	-27	NA	93377882	93408146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_34434.known	chr12	+	9708	5	FSM	ENSG00000173598.14	ENST00000415493.7	9708	5	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_3	476.594363688871	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	-1	True	NA	NA	False	AGTAAA	-27	NA	93377924	93408146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_34435.known	chr12	+	1419	5	FSM	ENSG00000173598.14	ENST00000547014.5	1419	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1132.65219727858	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTAGCATGCTCAGT	-12	True	NA	NA	False	AGTAAA	-30	NA	93378577	93400138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378791_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_34436.known	chr12	+	3607	5	FSM	ENSG00000173598.14	ENST00000549992.5	3607	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1072.52094967884	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACATGAACTCAG	624	False	NA	0	True	AATAAA	-40	NA	93378549	93402301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378791_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_34438.known	chr12	-	4877	4	FSM	ENSG00000177889.10	ENST00000318066.7	4877	4	0	0	0	0	multi-exon	FALSE	canonical	3	2535	junction_2	114.690888914508	3223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTAATATATTGTTTGTT	-16	True	NA	NA	False	AATAAA	-23	NA	93441947	93405683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93410080_93410733_93410875_93411052_93411300_93441854
transcript_34439.known	chr12	-	3018	2	FSM	ENSG00000177889.10	ENST00000550657.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	2703	junction_1	0	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCTTTTGATGACTG	-12	True	NA	-21	True	ATTAAA	-17	NA	93441943	93408370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93411300_93441854
transcript_3445.known	chr1	-	1030	6	FSM	ENSG00000121900.19	ENST00000373463.8	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.0445390872963	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTGCATGCAGGGG	-21	True	NA	-1	True	ATTAAA	-17	NA	32901389	32894594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32895909_32895970_32898125_32898320_32901222
transcript_34451.known	chr12	+	999	2	FSM	ENSG00000198015.14	ENST00000552938.1	999	2	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGATTGAACTTGATA	NA	False	NA	-9	True	ATTAAA	-6	NA	93500746	93502621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93501029_93501904
transcript_34452.known	chr12	+	725	7	FSM	ENSG00000198015.14	ENST00000551396.5	725	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1075.99179055109	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAGAGAAACCTATTT	24	False	NA	26	True	TATAAA	-22	NA	93467539	93501385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469188_93469356_93470485_93470506_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_34453.known	chr12	+	1983	6	FSM	ENSG00000198015.14	ENST00000393128.8	1983	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	962.912581701994	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGCTTTGTCGATGG	1	True	NA	22	True	ATTAAA	-37	NA	93467516	93502652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469191_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501184
transcript_34454.known	chr12	+	2105	7	FSM	ENSG00000198015.14	ENST00000358678.7	2105	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	1037.46062843635	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGATGGTGTATTCTT	2	True	NA	31	True	GATAAA	-19	NA	93467517	93502661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469191_93469356_93470485_93470591_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_34455.known	chr12	+	567	5	FSM	ENSG00000198015.14	ENST00000552326.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	942.8846695116	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGTAATATATAGTAAA	1	True	NA	-25	True	NA	NA	NA	93467516	93501291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469191_93469356_93479387_93479473_93487496_93487661_93501175
transcript_34463.known	chr12	-	1134	5	FSM	ENSG00000246985.8	ENST00000662875.1	1134	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	6.01560470775798	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGGGCTTCCAATT	3077	False	NA	NA	False	AAAACA	-45	NA	93570854	93542819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93570817
transcript_34464.known	chr12	-	2097	5	FSM	ENSG00000246985.8	ENST00000500986.6	2097	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	7.39509972887452	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGTAAATAAATGTGGCAA	-14	True	NA	NA	False	NA	NA	NA	93571768	93542021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93571566
transcript_34473.nic	chr12	-	1560	4	NIC	ENSG00000246985.8	novel	2097	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	5.73488351136175	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCGTAGGTATCTGTGT	-14	True	NA	-8	True	AATAAA	-25	NA	93571768	93542462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_93543306_93545070_93545359_93566743_93566971_93571566
transcript_34474.known	chr12	-	1542	4	FSM	ENSG00000246985.8	ENST00000668485.1	1542	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.25718035235908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCGTAGGTATCTGTGT	-5	True	NA	-8	True	AATAAA	-25	NA	93570961	93542462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93543306_93545070_93545399_93566743_93566971_93570817
transcript_34479.nnic	chr12	-	947	4	NNC	ENSG00000246985.8	novel	2097	5	NA	NA	-20	-4831	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.20144916122817	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATCAAAATATTTGAACAG	2143	False	NA	NA	False	AATAAA	-27	NA	93571788	93556263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_93556666_93566743_93566971_93567063_93567160_93571566
transcript_3448.nnic	chr1	+	1044	3	NNC	ENSG00000121905.10	novel	503	2	NA	NA	-439	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGGGTGGTGGGGGA	3853	False	NA	4	True	AATAAA	-17	NA	32893084	32894646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_32893141_32893523_32893630_32893764
transcript_34480.nic	chr12	-	687	4	NIC	ENSG00000246985.8	novel	618	4	NA	NA	-3	56	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	6.48074069840786	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTTTGTTTGTTTGTT	-8	True	NA	NA	False	AATAAA	-26	NA	93570964	93565527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_93565745_93566743_93566971_93567063_93567160_93570817
transcript_34481.nic	chr12	-	762	4	NIC	ENSG00000246985.8	novel	618	4	NA	NA	-20	56	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	7.84573486395988	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTTTGTTTGTTTGTT	2143	False	NA	NA	False	AATAAA	-26	NA	93571788	93565527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_93565745_93566743_93566971_93567063_93567160_93571566
transcript_34482.known	chr12	+	2761	3	FSM	ENSG00000120833.14	ENST00000340600.6	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	95	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACCTTATTTTCATG	NA	False	NA	NA	False	AATAAA	-15	NA	93569813	93576745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93570199_93572684_93573037_93574721
transcript_34483.known	chr12	+	2072	3	FSM	ENSG00000120833.14	ENST00000549206.5	2072	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	96	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	10	False	NA	-15	True	NA	NA	NA	93570398	93576174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93570666_93572684_93573037_93574721
transcript_34484.known	chr12	+	1065	3	FSM	ENSG00000120833.14	ENST00000536696.6	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	64.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTCACATAGAGTAT	-1	True	NA	NA	False	TATAAA	-31	NA	93570979	93575197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93571217_93572684_93573037_93574721
transcript_34485.known	chr12	+	2391	3	FSM	ENSG00000120833.14	ENST00000549122.5	2391	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	68	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	328	False	NA	17	True	AATAAA	-20	NA	93571360	93576206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93571915_93572684_93573037_93574721
transcript_34486.nic	chr12	+	2103	3	NIC	ENSG00000120833.14	novel	2881	3	NA	NA	-25	0	intron_retention	FALSE	canonical	3	20	junction_1	90.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	169	False	NA	17	True	AATAAA	-20	NA	93572109	93576206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_93572376_93572684_93573037_93574721
transcript_3449.nic	chr1	+	1369	2	ISM	ENSG00000121905.10	ENST00000373467.4	1412	4	6652	0	-381	0	3prime_fragment	FALSE	canonical	2	7	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGGGTGGTGGGGGA	3911	False	NA	4	True	AATAAA	-17	NA	32893142	32894646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_32893630_32893764
transcript_34490.nnic	chr12	-	1662	2	Genic_Genomic	ENSG00000186076.5	novel	765	1	NA	NA	-30	932	multi-exon	FALSE	canonical	3	33	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACTTTCAGATGATAA	-6	True	NA	-4	True	AATAAA	-28	NA	93641616	93639889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_-_93641448_93641512
transcript_34495.known	chr12	+	839	3	FSM	ENSG00000169372.13	ENST00000552983.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTATTCTTTTTTG	4	True	NA	NA	False	AATAAA	-24	NA	93677374	93738636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93677473_93678768_93679073_93738199
transcript_34496.known	chr12	+	1189	3	FSM	ENSG00000169372.13	ENST00000332896.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	2.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGTGTTGGGTTTTTTT	4	True	NA	37	True	AATAAA	-41	NA	93677374	93850756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93677473_93678768_93679073_93849969
transcript_3450.known	chr1	+	503	2	FSM	ENSG00000121905.10	ENST00000470896.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTAACTTGTCTTCTTT	-5	True	NA	NA	False	NA	NA	NA	32893523	32898441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32893630_32898044
transcript_34501.known	chr12	+	622	3	FSM	ENSG00000169372.13	ENST00000552033.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTGTAACCTTTGGTT	6	True	NA	NA	False	AATAAA	-13	NA	93677376	93738625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93677473_93678768_93679073_93738403
transcript_34512.known	chr12	-	3686	17	FSM	ENSG00000173588.16	ENST00000397809.10	3686	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.8190282131024	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAAAAGACAG	12	True	NA	NA	False	AATAAA	-22	NA	94459867	94307697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
transcript_34515.known	chr12	-	3130	16	FSM	ENSG00000173588.16	ENST00000339839.9	3130	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.2432662424232	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGTTTAATTTTACAT	5	True	NA	0	True	ATTAAA	-20	NA	94459946	94308279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_34519.nic	chr12	-	1932	11	ISM	ENSG00000173588.16	ENST00000339839.9	3130	16	-44	27331	-2	-3925	5prime_fragment	FALSE	canonical	3	67	junction_10	13.7218803376214	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATTCTGACCTAAAAC	464	False	NA	15	True	NA	NA	NA	94459990	94335610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_34525.known	chr12	-	3122	9	FSM	ENSG00000173588.16	ENST00000547575.5	3122	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	27.8025965514015	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTGAGTTTTAGCCT	-1	True	NA	-9	True	AATAAA	-15	NA	94459952	94368397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
transcript_34533.known	chr12	-	705	5	FSM	ENSG00000173588.16	ENST00000552632.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.012753442344	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGGATAGAGAATTCTT	4546	False	NA	-62	True	ATTAAA	-27	NA	94331798	94306448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94306626_94308782_94308918_94309917_94310108_94312913_94313018_94331699
transcript_34534.known	chr12	+	2482	1	FSM	ENSG00000278916.1	ENST00000623122.1	2482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATGCCAATAAATTCAG	4	True	NA	NA	False	ATTAAA	-17	NA	94460002	94462484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_94460000_94462500
transcript_34545.known	chr12	-	562	4	FSM	ENSG00000184752.14	ENST00000327772.7	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	288.905982400273	12874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-7	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_94994169_94994258_95002738_95002822_95003594
transcript_34546.known	chr12	-	276	3	FSM	ENSG00000184752.14	ENST00000547157.1	276	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	1831.5	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-10	True	NA	NA	False	ATTAAA	-16	NA	95003700	94971331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971486_95002805_95002822_95003594
transcript_34547.known	chr12	-	487	3	FSM	ENSG00000184752.14	ENST00000547986.5	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	1819.5	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGTCTTTCGTGCCT	-23	True	NA	NA	False	ATTAAA	-12	NA	95003713	94971335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_95002738_95002822_95003594
transcript_34548.known	chr12	-	708	5	FSM	ENSG00000184752.14	ENST00000684558.1	708	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1844.82145138764	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-7	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_94991826_94991973_94994169_94994258_95002738_95002822_95003594
transcript_34549.known	chr12	-	698	5	FSM	ENSG00000184752.14	ENST00000684171.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1829.19333313896	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCGTGCCTTTTTGCCC	-23	True	NA	NA	False	ATTAAA	-20	NA	95003713	94971327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_94974170_94974286_94994169_94994258_95002738_95002822_95003594
transcript_3455.known	chr1	-	886	7	FSM	ENSG00000004455.17	ENST00000550338.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	542.344498963118	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGACTTGGTTATGTTT	29	False	NA	NA	False	NA	NA	NA	33036902	33013206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33031543_33031662_33036735
transcript_34550.known	chr12	-	546	5	FSM	ENSG00000184752.14	ENST00000551991.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1788.21111729013	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	82	False	NA	NA	False	ATTAAA	-15	NA	95003608	94971332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_94994169_94994258_94996903_94996977_95002738_95002822_95003594
transcript_34555.known	chr12	-	4058	14	FSM	ENSG00000120798.17	ENST00000333003.10	4058	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	20.9914042706637	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTATCCTTCGTT	-6	True	NA	NA	False	AATATA	-20	NA	95073618	95020228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_34558.nic	chr12	-	2843	13	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	111	junction_3	18.0915879777192	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-24	True	NA	-3	True	AATAAA	-20	NA	95073636	95021892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_34562.known	chr12	-	2014	12	FSM	ENSG00000120798.17	ENST00000330677.7	2014	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	45.1572093216466	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTATTCTGCTTCAG	-5	True	NA	-20	True	AATAAA	-17	NA	95073537	95030417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95030874_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_34567.nnic	chr12	-	2703	12	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	-8	0	intron_retention	FALSE	canonical	3	17	junction_3	41.6704901826954	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-24	True	NA	-3	True	AATAAA	-20	NA	95073636	95021892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_95022404_95025149_95025256_95028386_95028525_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_3457.known	chr1	-	936	6	FSM	ENSG00000004455.17	ENST00000548033.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	474.205862469034	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTCAGAACCCCATGG	91	False	NA	NA	False	TTTAAA	-24	NA	33036840	33010477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_34570.known	chr12	-	1822	12	FSM	ENSG00000120798.17	ENST00000393101.7	1822	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	45.6816146535493	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	32	False	NA	-11	True	AATAAA	-26	NA	95073580	95030408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95030630_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_34579.nic	chr12	-	2597	11	ISM	ENSG00000120798.17	ENST00000333003.10	4058	14	-18	10180	-8	0	5prime_fragment	FALSE	canonical	3	105	junction_6	19.5317689931045	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-24	True	NA	-11	True	AATAAA	-26	NA	95073636	95030408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_34582.nic	chr12	-	2470	10	NIC	ENSG00000120798.17	novel	2014	12	NA	NA	-8	4	intron_retention	FALSE	canonical	3	19	junction_1	46.2267625975139	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATTCTGCTTCAGTTTT	-24	True	NA	-16	True	AATAAA	-21	NA	95073636	95030413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_95031489_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_34587.nic	chr12	-	948	5	ISM	ENSG00000120798.17	ENST00000393101.7	1822	12	-56	27761	-8	183	5prime_fragment	FALSE	canonical	3	144	junction_1	12.9107513336754	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTACTTTTTTATTTA	-24	True	NA	NA	False	AATATA	-15	NA	95073636	95058169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_34588.known	chr12	-	560	4	FSM	ENSG00000120798.17	ENST00000546367.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.9444253793922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGTTACAGAGATGTAT	22	True	NA	NA	False	NA	NA	NA	95073510	95058352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95058490_95062507_95062739_95067330_95067392_95073379
transcript_34591.known	chr12	-	2499	11	FSM	ENSG00000120798.17	ENST00000552861.5	2499	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.4854617385459	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-37	True	NA	-3	True	AATAAA	-20	NA	95073569	95021892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95022404_95025149_95025256_95028386_95028510_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_34592.known	chr12	-	9291	21	FSM	ENSG00000180263.14	ENST00000343958.9	9291	21	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_20	16.0227182462902	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTGTGATTTTTT	-44	True	NA	NA	False	AATAAA	-15	NA	95217467	95076748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95081557_95084497_95084647_95085779_95085909_95089568_95089697_95091706_95091810_95092698_95092846_95094591_95094695_95105006_95105087_95106953_95107038_95107562_95107632_95108347_95108420_95108502_95108562_95113650_95113702_95134738_95134827_95137521_95137679_95141387_95141540_95152810_95152842_95152925_95152994_95172599_95172745_95208842_95211268_95217224
transcript_34595.known	chr12	+	2712	13	FSM	ENSG00000028203.19	ENST00000552660.5	2712	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	107.065400573668	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTTGGAAATTCTT	-1	True	NA	12	True	AATAAA	-26	NA	95217811	95300921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_34597.known	chr12	+	3002	13	FSM	ENSG00000028203.19	ENST00000547997.5	3002	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	105.613551319053	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	-3	True	NA	15	True	AATAAA	-18	NA	95217760	95301172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_34608.known	chr12	+	2362	12	FSM	ENSG00000028203.19	ENST00000551994.5	2362	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	114.028269657097	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATAGAAGAAAAGTAAG	5	True	NA	NA	False	AATAAA	-3	NA	95217817	95300654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95217887_95251939_95252072_95257153_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_34611.known	chr12	+	4510	12	FSM	ENSG00000028203.19	ENST00000436874.6	4510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	93.4814252111302	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTTCTTGCCATGA	-6	True	NA	11	True	AATAAA	-23	NA	95217806	95302799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_3463.known	chr1	-	5059	5	FSM	ENSG00000004455.17	ENST00000354858.11	5059	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	504.604981644058	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGTGAGCTATTGT	NA	False	NA	-17	True	AATAAA	-6	NA	33037004	33008891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_34634.nnic	chr12	+	342	3	NIC	ENSG00000028203.19	novel	608	6	NA	NA	-2	-10082	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	5.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAGACTATTAGATAGAA	-16	True	NA	NA	False	AATAAA	-17	NA	95217796	95242358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_95217887_95224179_95224237_95242163
transcript_34635.nic	chr12	+	297	2	ISM	ENSG00000028203.19	ENST00000549589.5	571	6	59	14803	-2	-10062	5prime_fragment	FALSE	canonical	3	10	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTAAGACTCTAATGGG	-8	True	NA	NA	False	AATAAA	-37	NA	95217804	95242378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_95217887_95242163
transcript_34641.known	chr12	+	1874	11	FSM	ENSG00000111142.14	ENST00000551840.5	1874	11	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	186.511152481561	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTCAGATCTGAGAG	2	True	NA	23	True	AATAAA	-1	NA	95474161	95514326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95474331_95476073_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_34642.known	chr12	+	1862	11	FSM	ENSG00000111142.14	ENST00000546753.5	1862	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	251.722088820191	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCCATTTTCTAAA	NA	False	NA	-4	True	NA	NA	NA	95474080	95514299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485947_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_34643.known	chr12	+	1836	10	FSM	ENSG00000111142.14	ENST00000261220.13	1836	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	307.926799061477	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACATCTCAATGTCT	-10	True	NA	39	True	AATAAA	-17	NA	95474149	95514342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95474331_95476073_95476179_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_34644.known	chr12	+	388	2	FSM	ENSG00000111142.14	ENST00000549136.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGTTATTCACT	1911	False	NA	NA	False	NA	NA	NA	95476070	95483494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95476179_95483214
transcript_34651.known	chr12	-	3161	6	FSM	ENSG00000136014.12	ENST00000393091.6	3161	6	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	303.738440109249	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAAATTATAGGGC	-3	True	NA	74	True	AATAGA	-7	NA	95548844	95517275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
transcript_34652.known	chr12	-	4008	6	FSM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_5	233.198284727826	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	6	True	NA	-8	True	ATTAAA	-21	NA	95551476	95516559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
transcript_34656.known	chr12	-	2499	6	FSM	ENSG00000136014.12	ENST00000537435.2	2499	6	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_5	407.279952857982	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGACAATGGGGTTTT	3210	False	NA	NA	False	AATGAA	-37	NA	95548272	95518153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95547982
transcript_3467.known	chr1	-	3597	7	FSM	ENSG00000004455.17	ENST00000373449.7	3597	7	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	257.267046730306	2482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	2	True	NA	-10	True	ATTAAA	-16	NA	33036883	33007985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_3468.known	chr1	-	2840	8	FSM	ENSG00000004455.17	ENST00000672308.1	2840	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	558.728001438837	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAAGGGACTCTTTTAA	-1	True	NA	-75	True	NA	NA	NA	33036863	33010118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33010834_33011447_33011711_33012073_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_34682.nic	chr12	-	723	2	ISM	ENSG00000136014.12	ENST00000393091.6	3161	6	-17	16419	-17	69	5prime_fragment	FALSE	canonical	3	286	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTAAAGAAAAGACGG	2621	False	NA	NA	False	AGTAAA	-3	NA	95548861	95533694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_95534327_95548770
transcript_34683.nic	chr12	-	1032	2	ISM	ENSG00000136014.12	ENST00000258499.8	4008	6	-195	17135	-195	69	5prime_fragment	FALSE	canonical	3	475	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTAAAGAAAAGACGG	NA	False	NA	NA	False	AGTAAA	-3	NA	95551671	95533694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_95534327_95551271
transcript_3469.known	chr1	-	811	5	FSM	ENSG00000004455.17	ENST00000480134.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	521.980064274489	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCGTGTGTGCTACT	8	True	NA	-23	True	ATTAAA	-20	NA	33036877	33013043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33013403_33014521_33014595_33021592_33021704_33024441_33024568_33036735
transcript_34693.nnic	chr12	+	1115	5	NNC	ENSG00000257150.4	novel	2148	5	NA	NA	-39	66776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.58602010819715	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTTGTGAGTATTCTT	3642	False	NA	NA	False	TATAAA	-21	NA	95551542	95740775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_95551801_95649327_95649407_95665682_95665777_95737844_95737913_95740159
transcript_3470.known	chr1	-	920	5	FSM	ENSG00000004455.17	ENST00000487289.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	529.856289478572	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTAGTCCATACCTT	87	False	NA	NA	False	NA	NA	NA	33036844	33019682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33020162_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_3471.known	chr1	+	2048	11	FSM	ENSG00000142920.17	ENST00000373443.7	2048	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.13209195267316	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGAATCTGGCAGTTTG	10	True	NA	11	True	AATAAA	-26	NA	33081166	33120529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_33081295_33081390_33081509_33082177_33082355_33083953_33084128_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_34710.nnic	chr12	+	688	2	Antisense	novelGene_ENSG00000074527.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGTGAGTATTCTTCC	NA	False	NA	NA	False	TATAAA	-23	NA	95737842	95740777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_95737913_95740159
transcript_34713.known	chr12	-	764	2	FSM	ENSG00000074527.13	ENST00000674466.1	764	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAATGTGTAGTCATTT	177	False	NA	0	True	CATAAA	-18	NA	95791189	95786782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95787469_95791111
transcript_34714.known	chr12	-	396	2	FSM	ENSG00000258343.2	ENST00000551893.1	396	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATCTCACTAGTTTTT	7229	False	NA	NA	False	ATTAAA	-22	NA	95858798	95858236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95858588_95858753
transcript_34724.known	chr12	+	1389	4	FSM	ENSG00000139343.11	ENST00000266735.10	452	4	-24	-913	-24	602	multi-exon	FALSE	canonical	3	5385	junction_3	228.461521194854	17298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTCTTACTGCTTTT	NA	False	NA	NA	False	AATACA	-19	NA	95858927	95867053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95859077_95861167_95861294_95865323_95865389_95866004
transcript_34725.known	chr12	+	552	3	FSM	ENSG00000139343.11	ENST00000553192.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2944	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTATTAAAAAAGGGATGG	-7	True	NA	NA	False	NA	NA	NA	95858964	95880001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95859077_95861167_95861294_95879687
transcript_34729.known	chr12	-	2140	19	FSM	ENSG00000111144.10	ENST00000228740.7	2140	19	0	0	0	0	multi-exon	TRUE	canonical	3	982	junction_3	162.198095618359	2507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATTTTCTCTCAGTAT	0	True	NA	-1	True	ATTAAA	-20	NA	96035587	96000752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_34730.known	chr12	+	4201	5	FSM	ENSG00000111145.8	ENST00000228741.8	4201	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	6.42261628933256	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGGTAACTGGATTGG	-12	True	NA	18	True	AATAAA	-20	NA	96194374	96269824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96194706_96223564_96223774_96246939_96247735_96259730_96259854_96267081
transcript_34732.known	chr12	-	4036	17	FSM	ENSG00000059758.8	ENST00000261211.8	4036	17	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	29.9309100262588	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCATTTGTTACATAAAG	-14	True	NA	NA	False	TATAAA	-14	NA	96400439	96278260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_96280280_96280807_96280886_96282508_96282600_96283602_96283646_96286042_96286149_96286663_96286762_96289166_96289288_96294998_96295123_96297269_96297333_96297626_96297722_96298868_96298984_96300303_96300361_96311051_96311178_96313320_96313455_96323947_96324113_96334718_96334866_96399985
transcript_34738.nic	chr12	+	3258	16	NIC	ENSG00000139350.12	novel	4015	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	49.7388736860371	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAACAAACCTTTAGC	-24	True	NA	NA	False	ATTAAA	-10	NA	96907222	96953221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_96907301_96907603_96907625_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_34739.known	chr12	+	4015	16	FSM	ENSG00000139350.12	ENST00000266742.9	4015	16	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	39.1360021804306	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	10	True	NA	6	True	ATTAAA	-18	NA	96907256	96953780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96907301_96907603_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_34742.known	chr12	+	3366	15	FSM	ENSG00000139350.12	ENST00000429527.6	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	50.1101338074853	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTGGTTTATAGCAT	-23	True	NA	15	True	AATAAA	-20	NA	96907223	96953351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96907301_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_34744.known	chr12	+	2367	15	FSM	ENSG00000139350.12	ENST00000557644.5	2367	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	49.2975658628294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAACAGGATCTTTATTTT	55	False	NA	NA	False	ATTAAA	-34	NA	96907465	96952270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96907625_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_34748.known	chr12	+	2490	14	FSM	ENSG00000139350.12	ENST00000411739.6	2490	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	48.8094956325644	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAATTTTAAAATGGCA	-9	True	NA	NA	False	TTTAAA	-31	NA	96907237	96952475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96907301_96907603_96907857_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_34763.nic	chr12	+	2850	10	FSM	ENSG00000255794.10	ENST00000687565.1	2690	10	-160	0	-15	0	multi-exon	FALSE	canonical	2	8	junction_6	7.37864787372622	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	216	False	NA	13	True	AATAAA	-15	NA	97465077	97565035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796_97561048_97564149
transcript_34764.nic	chr12	+	2261	10	NIC	ENSG00000255794.10	novel	2690	10	NA	NA	-15	0	intron_retention	FALSE	canonical	2	8	junction_6	7.64489662745314	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTCTATTTCCTTT	216	False	NA	12	True	AATAAA	-14	NA	97465077	97565034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796_97561048_97564737
transcript_34765.known	chr12	+	1587	10	FSM	ENSG00000255794.10	ENST00000662502.1	1587	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.99228022593531	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTTATCTTTTGT	483	False	NA	1	True	AATAAA	-3	NA	97465720	97565023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493180_97493286_97493890_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796_97561048_97564737
transcript_34769.known	chr12	+	2632	9	FSM	ENSG00000255794.10	ENST00000660138.1	2632	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.75925291729789	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	33	False	NA	13	True	AATAAA	-15	NA	97465169	97565035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149
transcript_3477.known	chr1	-	3817	5	FSM	ENSG00000116525.14	ENST00000291416.10	3817	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	7.42882897905181	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCCATTCATTTTGA	6	True	NA	-1	True	ATTAAA	-22	NA	33182043	33145398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024
transcript_34771.known	chr12	+	1736	9	FSM	ENSG00000255794.10	ENST00000663509.1	1736	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.76912961663017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGCAGAAAATGAGAAAGTA	0	True	NA	NA	False	AAGAAA	-16	NA	97465206	97560964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493890_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796
transcript_34772.known	chr12	+	2061	9	FSM	ENSG00000255794.10	ENST00000656448.1	2061	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.4372685153431	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	483	False	NA	13	True	AATAAA	-15	NA	97465720	97565035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493894_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149
transcript_34773.nic	chr12	+	2119	9	NIC	ENSG00000255794.10	novel	1587	10	NA	NA	-15	0	intron_retention	FALSE	canonical	2	8	junction_3	7.32717544487642	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTTGTCTATTTCCTTT	216	False	NA	12	True	AATAAA	-14	NA	97465077	97565034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_97465728_97492460_97492607_97493176_97493286_97493890_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564737
transcript_34776.known	chr12	+	1980	8	FSM	ENSG00000255794.10	ENST00000666798.1	1980	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	9.64682458064808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATTTATTTCTCTTTTT	483	False	NA	NA	False	AATAAA	-19	NA	97465720	97533767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493894_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97532675
transcript_3478.known	chr1	+	9456	8	FSM	ENSG00000121903.15	ENST00000684572.1	9456	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.1780301787479	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTTTTCGATTCTT	-6	True	NA	NA	False	AATAAA	-22	NA	33472644	33501643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_33472692_33479178_33479706_33488464_33488652_33489114_33489192_33489517_33489603_33491024_33491703_33493186_33493616_33494217
transcript_34783.known	chr12	+	687	1	FSM	ENSG00000255794.10	ENST00000547946.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	453	False	NA	13	True	AATAAA	-15	NA	97564348	97565035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97564300_97565000
transcript_34785.known	chr12	-	3311	1	FSM	ENSG00000227825.4	ENST00000554295.1	3311	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAATAGTGTTACACTGT	47	False	NA	NA	False	AATAAA	-33	NA	98457145	98453834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98453800_98457100
transcript_34791.nnic	chr12	-	406	4	NNC	ENSG00000245017.3	novel	1828	4	NA	NA	430	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1.69967317119759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTAGTTTGGGTTCTGAT	424	False	NA	-1	True	ATTAAA	-23	NA	98503428	98486972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_98487189_98493430_98493485_98502582_98502613_98503322
transcript_34792.known	chr12	-	1825	4	FSM	ENSG00000245017.3	ENST00000501499.2	1828	4	3	0	3	0	multi-exon	FALSE	canonical	2	3	junction_1	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAATAGCTCATCTTTTC	-3	True	NA	NA	False	AATAAA	-15	NA	98503855	98485543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98487189_98493430_98493485_98502582_98502613_98503759
transcript_34793.known	chr12	-	309	2	FSM	ENSG00000245017.3	ENST00000549004.1	309	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTAGTTTGGGTTCTGAT	2982	False	NA	-1	True	ATTAAA	-23	NA	98491086	98486972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98487189_98490993
transcript_34794.known	chr12	+	3615	4	FSM	ENSG00000120802.14	ENST00000266732.8	3615	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	165.992637052237	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	5	True	NA	19	True	AATAAA	-21	NA	98515629	98535634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98532822
transcript_34795.known	chr12	+	4136	9	FSM	ENSG00000120802.14	ENST00000556029.6	4136	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_5	172.85163435733	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATTTCTGGATAACAT	-35	True	NA	53	True	AATAAA	-21	NA	98515589	98550351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572
transcript_34802.known	chr12	+	1285	8	FSM	ENSG00000075415.15	ENST00000549338.5	1285	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1025.33958535995	7860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACTGTTGAAATAAAC	8	False	NA	-16	True	NA	NA	NA	98593695	98601674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98593745_98593974_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_34803.known	chr12	+	556	4	FSM	ENSG00000075415.15	ENST00000547534.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	2121	junction_1	371.760675704142	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTTCCGAGTGTTCT	-2	True	NA	NA	False	TTTAAA	-20	NA	98593685	98598073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98593741_98593974_98594136_98595726_98595849_98597855
transcript_34804.known	chr12	+	1417	8	FSM	ENSG00000075415.15	ENST00000551123.5	1417	8	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	1413.79124112062	3643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGTGACTTATTTT	8	False	NA	17	True	AATAAA	-15	NA	98593695	98601707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98593741_98593978_98594136_98595432_98595662_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_34805.known	chr12	-	1645	3	FSM	ENSG00000166130.15	ENST00000342502.6	1645	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	34.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	NA	False	NA	-14	True	AATAAA	-45	NA	98645113	98613404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98614341_98634295_98634414_98644522
transcript_34807.known	chr12	-	2902	3	FSM	ENSG00000166130.15	ENST00000299157.5	2902	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	17	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAACTTTGTTGTTTTA	-23	True	NA	NA	False	AATAAA	-17	NA	98644788	98624248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98626767_98634295_98634414_98644522
transcript_34811.known	chr12	-	1368	2	FSM	ENSG00000166130.15	ENST00000393042.3	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	72	False	NA	-14	True	AATAAA	-45	NA	98644954	98613404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98614341_98644522
transcript_3482.known	chr1	+	2136	7	FSM	ENSG00000142698.15	ENST00000373374.7	2136	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	4.74926894959167	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	NA	False	NA	8	True	GATAAA	-19	NA	34166882	34219131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34167172_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_34820.known	chr12	-	569	5	FSM	ENSG00000185046.20	ENST00000552407.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	9.66953980290686	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCCAAACTACTTTATT	-2	True	NA	NA	False	NA	NA	NA	98895208	98798929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98799006_98800996_98801126_98829173_98829354_98832028_98832137_98895132
transcript_34823.nic	chr12	+	830	2	ISM	ENSG00000120868.14	ENST00000547743.1	651	3	-510	459	-129	-459	5prime_fragment	FALSE	canonical	3	62	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGGAAAAAGTAAGAAA	-4	True	NA	25	True	NA	NA	NA	98645160	98648473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_98645836_98648318
transcript_34824.known	chr12	-	5198	21	FSM	ENSG00000111647.13	ENST00000279907.12	5198	21	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	16.9147864308125	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACCCTACTGAACTTA	-15	True	NA	-32	True	AATAAA	-26	NA	100142874	100037071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100037756_100039595_100039790_100047529_100047639_100047942_100048197_100050167_100050319_100051078_100051222_100057570_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_34826.known	chr12	-	2023	13	FSM	ENSG00000111647.13	ENST00000356828.7	2023	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.9915451167084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATTTTATTCTA	12	True	NA	NA	False	AATAAA	-21	NA	100142847	100069907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100070170_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_34828.known	chr12	-	1750	1	FSM	ENSG00000280088.1	ENST00000623268.1	1750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGATGTTTTTCAGATA	NA	False	NA	-8	True	AATAAA	-17	NA	100034074	100032324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100032300_100034100
transcript_34829.known	chr12	+	1877	11	FSM	ENSG00000075089.10	ENST00000546902.5	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	98.9725214390338	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	-2	True	NA	10	True	AATAAA	-17	NA	100200815	100224424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_3484.nnic	chr1	+	964	4	NIC	ENSG00000142698.15	novel	2136	7	NA	NA	46	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	14.9888847706114	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	10	False	NA	8	True	GATAAA	-19	NA	34166928	34219131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_34167172_34208156_34208235_34212209_34212407_34218685
transcript_34847.known	chr12	-	768	5	FSM	ENSG00000166153.17	ENST00000299185.12	768	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	12.3970762682174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTGAACATTAGAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	100267079	100252479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100252537_100253488_100253716_100256048_100256227_100262263_100262410_100266919
transcript_34849.known	chr12	-	1155	5	FSM	ENSG00000166153.17	ENST00000416321.5	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.4731800328267	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTGCAAGCCAAATC	NA	False	NA	NA	False	AATAAA	-28	NA	100267079	100252262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100252537_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_34858.known	chr12	-	1033	4	FSM	ENSG00000166153.17	ENST00000551642.1	1033	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	3.74165738677394	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTGGAAATCAGAGTG	20	False	NA	-14	True	AATAAA	-22	NA	100267055	100255872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100256227_100262263_100262410_100263496_100263894_100266919
transcript_34860.known	chr12	-	2343	9	FSM	ENSG00000238105.7	ENST00000421840.2	2343	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	11.2694276695846	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTCTGAGTATGTTAT	NA	False	NA	-6	True	NA	NA	NA	100173245	100165047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100166141_100166330_100166637_100167335_100167444_100167549_100167640_100168451_100168634_100168923_100169200_100170564_100170668_100170936_100170988_100173111
transcript_34868.known	chr12	+	1747	11	FSM	ENSG00000075089.10	ENST00000548180.5	1747	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	99.2613217723802	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGGGCAGAATATCT	-1	True	NA	9	True	AATAAA	-16	NA	100200816	100224423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_34869.known	chr12	+	1659	11	FSM	ENSG00000075089.10	ENST00000552376.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	94.5541643715389	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	12	True	NA	7	True	AATAAA	-14	NA	100200829	100224421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
transcript_34870.known	chr12	+	595	6	FSM	ENSG00000075089.10	ENST00000547458.5	595	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.841039539043	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATAGTGGATATTCCTTT	-1	True	NA	NA	False	NA	NA	NA	100200816	100210135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100208771_100208890_100210072
transcript_34871.known	chr12	+	3948	19	FSM	ENSG00000136021.19	ENST00000635101.1	3948	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	45.4395881675825	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCAGTTGTATCTTCTG	9	True	NA	18	True	AATAAA	-18	NA	100267245	100340139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317680_100317693_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
transcript_34875.known	chr12	+	2328	17	FSM	ENSG00000136021.19	ENST00000549687.5	2328	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	14.4231530446709	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAACAAAAATTAGCAAA	-5	True	NA	NA	False	NA	NA	NA	100267139	100337404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386
transcript_34878.nic	chr12	+	1394	11	NIC	ENSG00000139354.11	novel	5736	10	NA	NA	-29	-1050	combination_of_known_junctions	TRUE	canonical	3	11	junction_2	11.7817655722731	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGACGTCCACCAGGTGC	-30	True	NA	NA	False	AAAAAG	-11	NA	100573653	100623840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_100573786_100591735_100591857_100592373_100592450_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_34881.known	chr12	+	5736	10	FSM	ENSG00000139354.11	ENST00000547754.6	5736	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	13.4421485642992	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCAGTTTGCTTT	0	True	NA	12	True	ATTAAA	-16	NA	100573683	100628288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100573786_100591735_100591857_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_34886.known	chr12	+	2218	9	FSM	ENSG00000139354.11	ENST00000266754.9	2218	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.2225241501304	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATACTCATTATAAAAA	-1	True	NA	NA	False	AAGAAA	-13	NA	100573682	100624890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100573786_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_34890.known	chr12	+	9031	62	FSM	ENSG00000120800.5	ENST00000261637.5	9031	62	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_22	28.7595000253693	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTCTTCACTGTTTAA	-10	True	NA	13	True	AATAAA	-18	NA	101280104	101386618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732_101290889_101291741_101291889_101291969_101292105_101293167_101293246_101295479_101295659_101299681_101299838_101299972_101300062_101302447_101302554_101305914_101306066_101306698_101306762_101308184_101308344_101309762_101309840_101311718_101311799_101312035_101312277_101317477_101317664_101319544_101319636_101320851_101320938_101321503_101321630_101327080_101327248_101329240_101329450_101333300_101333445_101334424_101334505_101338050_101338278_101338812_101338958_101340522_101340611_101342445_101342590_101342786_101342838_101342940_101343094_101344594_101344751_101345553_101345695_101346450_101346589_101352054_101352195_101353046_101353130_101354831_101355119_101356553_101356694_101356925_101357083_101361961_101362061_101363575_101363744_101365458_101365626_101366557_101366700_101367859_101367977_101369720_101369892_101370431_101370564_101371057_101371169_101372883_101372964_101373400_101373471_101373584_101373768_101374807_101374940_101375623_101375757_101379370_101379559_101381139_101381212_101383040_101383314_101383542_101383670_101385582_101385729_101385967
transcript_34894.known	chr12	+	1585	8	FSM	ENSG00000120800.5	ENST00000551825.1	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	15.5655296821443	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGAGGGTGAGGCAG	13	True	NA	NA	False	AATACA	-27	NA	101280127	101291427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732
transcript_34900.known	chr12	-	1231	5	FSM	ENSG00000120805.14	ENST00000539055.5	1231	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	278.47306871581	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCTGCTAGCTTGTAA	17	True	NA	NA	False	NA	NA	NA	101407746	101394917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101407641
transcript_34904.known	chr12	-	470	3	FSM	ENSG00000120805.14	ENST00000551688.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGTTGGAGGGATAA	14	True	NA	NA	False	AGTAAA	-13	NA	101407749	101395487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101395671_101396398_101396578_101407641
transcript_34907.known	chr12	-	3197	6	FSM	ENSG00000120805.14	ENST00000261636.13	3197	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	212.245706670359	2284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGTCCTTTCTGATC	-9	True	NA	-1	True	AATAAA	-42	NA	101407772	101393115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
transcript_34908.known	chr12	+	1572	9	FSM	ENSG00000111666.11	ENST00000229266.8	1572	9	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_8	24.6373699895098	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	-26	True	NA	16	True	AATAAA	-22	NA	101697639	101729074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726405_101728900
transcript_34910.known	chr12	-	760	3	FSM	ENSG00000111670.16	ENST00000392919.4	760	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	140.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTTTCTGGTTTTTGTTT	1	True	NA	NA	False	GATAAA	-14	NA	101830843	101795873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101796263_101796676_101796763_101830558
transcript_34911.known	chr12	-	373	2	FSM	ENSG00000111670.16	ENST00000549165.1	373	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGGAAAAAAAAAC	300	False	NA	NA	False	NA	NA	NA	101830679	101796510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101796763_101830558
transcript_34912.known	chr12	-	598	4	FSM	ENSG00000111670.16	ENST00000550718.1	598	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	121.844162765395	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGTCTTTAGTAATCC	NA	False	NA	NA	False	AATAAA	-18	NA	101760090	101756214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101756567_101757211_101757311_101757571_101757658_101760029
transcript_34913.known	chr12	+	3279	7	FSM	ENSG00000136048.14	ENST00000258534.13	3279	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3.93347457373532	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTGGTAATGTTGACTG	-5	True	NA	4	True	AATAAA	-14	NA	101877579	101923612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_101877921_101897862_101897931_101901290_101901434_101908185_101908364_101914173_101914233_101920108_101920202_101921215
transcript_34923.known	chr12	-	865	7	FSM	ENSG00000120860.11	ENST00000545679.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	49.5333781964803	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	2	True	NA	-2	True	AATAAA	-18	NA	102062079	102012941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_34924.known	chr12	-	945	8	FSM	ENSG00000120860.11	ENST00000544341.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	73.2507574663072	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	8	True	NA	-2	True	AATAAA	-18	NA	102062073	102012941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102013193_102017719_102017806_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_34925.known	chr12	-	921	8	FSM	ENSG00000120860.11	ENST00000535501.5	921	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	70.1444573573649	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGTCTTGTTGCTAAA	-28	True	NA	-4	True	AATAAA	-16	NA	102062034	102012943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102050188_102050292_102061247_102061347_102061911
transcript_34926.known	chr12	-	569	6	FSM	ENSG00000120860.11	ENST00000541569.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	9.2520268049763	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAATAAAAATATTTCA	28	True	NA	NA	False	AATATA	-33	NA	102061978	102025920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102026039_102039867_102039979_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_34927.known	chr12	-	289	3	FSM	ENSG00000120860.11	ENST00000536930.1	289	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	72	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAAAGCAACTTGTTT	32	True	NA	NA	False	AATAAA	-24	NA	102061974	102059663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102059791_102061247_102061347_102061911
transcript_34932.known	chr12	-	645	2	FSM	ENSG00000075188.9	ENST00000550459.1	645	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAGTCTACAAAACTGC	833	False	NA	NA	False	NA	NA	NA	102119420	102118364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102118584_102118994
transcript_34933.known	chr12	-	2362	10	FSM	ENSG00000075188.9	ENST00000552283.6	2362	10	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_6	44.4149902400607	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTATGTGTCTGTCACG	-17	True	NA	NA	False	AATAAA	-15	NA	102120114	102073102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362_102118584_102120049
transcript_34934.known	chr12	-	1203	9	FSM	ENSG00000075188.9	ENST00000251074.5	1203	9	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_6	45.3038353784754	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTTTTCTACTCT	1670	False	NA	-16	True	AATAAA	-15	NA	102118583	102074196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362
transcript_34937.known	chr12	+	1916	11	FSM	ENSG00000185480.12	ENST00000392911.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	130.413227856686	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTTTAAAAATACTAGT	-3	True	NA	NA	False	NA	NA	NA	102120246	102196429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120287_102123885_102124042_102148234_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195311_102195448_102195950
transcript_3494.known	chr1	-	897	2	FSM	ENSG00000163866.9	ENST00000423898.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAGGGATACCTGCA	7912	False	NA	-77	True	NA	NA	NA	34859717	34855348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34855983_34859454
transcript_34940.nic	chr12	+	2971	10	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-35	-4	intron_retention	FALSE	canonical	3	140	junction_9	116.557515077268	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	NA	False	NA	8	True	AATAAA	-19	NA	102120147	102197516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195950
transcript_3495.known	chr1	-	918	2	FSM	ENSG00000163866.9	ENST00000456842.1	918	2	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTCACTTTGGGGCA	7	True	NA	NA	False	NA	NA	NA	34859755	34855168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34855983_34859651
transcript_34952.nic	chr12	+	2608	8	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-35	-4	intron_retention	FALSE	canonical	3	74	junction_6	143.252453054468	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	NA	False	NA	8	True	AATAAA	-19	NA	102120147	102197516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102182548_102182628_102195950
transcript_34956.nic	chr12	+	2529	7	NIC	ENSG00000185480.12	novel	3076	11	NA	NA	-35	-4	intron_retention	FALSE	canonical	3	70	junction_6	134.67790794666	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCTTTGAAACTTTATT	NA	False	NA	8	True	AATAAA	-19	NA	102120147	102197516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102195950
transcript_3496.known	chr1	-	5694	2	FSM	ENSG00000163866.9	ENST00000521580.3	5694	2	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	0	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGTTAATCAGATCCT	13	True	NA	-2	True	ATTAAA	-15	NA	34859749	34850361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34855983_34859676
transcript_34969.known	chr12	+	835	5	FSM	ENSG00000185480.12	ENST00000392909.7	835	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	231.158495409535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCAGAACATTGAAGAAG	8	True	NA	NA	False	NA	NA	NA	102120203	102151823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120287_102123885_102124042_102148229_102148464_102150263_102150372_102151569
transcript_3497.known	chr1	+	1355	2	FSM	ENSG00000189280.3	ENST00000338513.1	1355	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGTGCCCTCTGGTTGT	-18	True	NA	8	True	AATAAA	-20	NA	34755046	34758512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34755196_34757306
transcript_34973.nic	chr12	+	1075	5	ISM	ENSG00000185480.12	ENST00000327680.7	3076	11	-35	32645	-35	9595	5prime_fragment	FALSE	canonical	3	344	junction_4	60.3795288156508	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTCTGTTAAATGTTCTT	NA	False	NA	5	True	AATAAA	-18	NA	102120147	102164875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_102120287_102123885_102124042_102148229_102148464_102153868_102153977_102164437
transcript_34977.known	chr12	+	992	5	FSM	ENSG00000185480.12	ENST00000543784.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	206.297115830542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAATTATGATGATTT	-1	True	NA	NA	False	TATAAA	-39	NA	102120194	102196368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120287_102123885_102124042_102164437_102164609_102165728_102165884_102195950
transcript_34978.nic	chr12	+	1906	4	ISM	ENSG00000185480.12	ENST00000541394.5	2452	12	-37	43721	-35	934	5prime_fragment	FALSE	canonical	3	25	junction_3	209.415588934752	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAAAAGAGGAGTTAAA	NA	False	NA	NA	False	AGTAAA	-16	NA	102120147	102152946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_102120287_102123885_102124042_102148229_102148464_102151569
transcript_3498.known	chr1	+	1444	2	FSM	ENSG00000189433.7	ENST00000339480.3	1444	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGACCAGGTGGGGA	-1	True	NA	NA	False	AATAAA	-17	NA	34759739	34762327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34759789_34760932
transcript_34984.nnic	chr12	+	744	3	NNC	ENSG00000185480.12	novel	976	3	NA	NA	-35	-14753	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	251.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAAAAAGGATACATTA	NA	False	NA	NA	False	AAAAAG	-26	NA	102120147	102134254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_102120287_102123885_102124042_102133805
transcript_34985.known	chr12	+	976	3	FSM	ENSG00000185480.12	ENST00000537257.5	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_2	44.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTTGTCTACGTTA	-5	True	NA	NA	False	ATTAAA	-20	NA	102120244	102149007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120287_102123885_102124042_102148229
transcript_3499.known	chr1	+	1059	2	FSM	ENSG00000187513.9	ENST00000450137.1	1059	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGACCACAGAGGAGAGG	0	True	NA	NA	False	NA	NA	NA	34792998	34795090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34793069_34794101
transcript_34990.known	chr12	+	1061	5	FSM	ENSG00000185480.12	ENST00000541668.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	197.668124643302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCAAAAAAAAACAAAAACAA	0	True	NA	NA	False	NA	NA	NA	102120382	102155280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120492_102123885_102124042_102148229_102148464_102153868_102153977_102154826
transcript_34991.known	chr12	+	833	3	FSM	ENSG00000185480.12	ENST00000392914.3	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	196.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGCATCTCCTGCTTT	3503	False	NA	NA	False	AATACA	-23	NA	102123885	102152012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102124042_102148229_102148464_102151569
transcript_34993.known	chr12	-	3759	13	FSM	ENSG00000171759.10	ENST00000553106.6	3759	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	2.77888866675551	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTTGACTTTATTTTC	-10	True	NA	NA	False	AATAAA	-21	NA	102917244	102836888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102839219_102840399_102840516_102843645_102843780_102844335_102844432_102846894_102846952_102851686_102851757_102852814_102852951_102855135_102855333_102866595_102866664_102877461_102877551_102894734_102894919_102912790_102912899_102917070
transcript_34997.known	chr12	-	738	3	FSM	ENSG00000257681.1	ENST00000550029.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTACCGATGTCTGCCC	6150	False	NA	-6	True	AATAAA	-31	NA	103768858	103763311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103763819_103766734_103766914_103768806
transcript_34998.known	chr12	+	2646	18	FSM	ENSG00000166598.16	ENST00000680316.1	2646	18	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	1425.28877423679	5888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	116	False	NA	9	True	AATAAA	-11	NA	103930599	103947922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930623_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35.known	ERCC-00078	+	977	1	FSM	ERCC-00078A	DQ883673	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	161	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00078_+_0_1000
transcript_350.known	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	4180	junction_1	2926.22647107157	11224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
transcript_3500.known	chr1	+	1621	2	FSM	ENSG00000187513.9	ENST00000342280.5	1621	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGTGTATTGATGCTA	0	True	NA	17	True	AATAAA	-17	NA	34792998	34795747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34793069_34794196
transcript_35009.known	chr12	-	620	5	FSM	ENSG00000204954.10	ENST00000549960.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	27.5079533953364	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGATGTTTAGCCGA	37	True	NA	54	True	NA	NA	NA	103957134	103951409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103953413_103953535_103954874_103954969_103956630_103956749_103957068
transcript_35016.known	chr12	-	1243	4	FSM	ENSG00000204954.10	ENST00000547975.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	21.483844059096	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTTTATTTCATTAA	-10	True	NA	-3	True	ATTAAA	-25	NA	103957181	103950739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103953413_103953535_103956630_103956749_103957068
transcript_35025.known	chr12	-	685	3	FSM	ENSG00000204954.10	ENST00000552940.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	9.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGGACTGAAAGAAAGAA	24	True	NA	-120	True	NA	NA	NA	103957147	103951583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103953413_103953535_103956630
transcript_35027.known	chr12	-	1730	3	FSM	ENSG00000204954.10	ENST00000543740.6	1730	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTAATAATGTTTTTTA	21	False	NA	NA	False	ATTAAA	-23	NA	103965695	103950201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103953413_103953535_103965515
transcript_35029.known	chr12	-	1702	3	FSM	ENSG00000204954.10	ENST00000378090.9	1702	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTTTTAACTTAAAA	-44	True	NA	NA	False	ATTAAA	-31	NA	103957215	103950193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103956630_103956749_103957068
transcript_35030.known	chr12	-	463	3	FSM	ENSG00000204954.10	ENST00000547945.5	463	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	23	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGTGCTCAGTGGAT	8443	False	NA	44	True	NA	NA	NA	103957273	103951419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103956630_103956749_103957139
transcript_3504.known	chr1	-	5122	16	FSM	ENSG00000163867.17	ENST00000357182.9	5122	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	15.0607658061158	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTTCATATAATTTT	-5	True	NA	-4	True	AATAAA	-22	NA	35031945	34986164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34988936_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35019352_35019603_35020382_35020468_35030546_35030714_35031814
transcript_35042.known	chr12	-	660	3	FSM	ENSG00000204954.10	ENST00000553183.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACGCGAAATAGAATATTT	8	True	NA	-33	True	NA	NA	NA	103965708	103951281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103956630_103956749_103965515
transcript_35043.known	chr12	+	674	2	FSM	ENSG00000257327.1	ENST00000551650.1	674	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTATTAGACTTTTTA	NA	False	NA	NA	False	AATAAA	-23	NA	103841450	103844664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103841635_103844174
transcript_35047.known	chr12	-	1446	2	FSM	ENSG00000204954.10	ENST00000549478.1	1446	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCATCTTTATTTC	-19	True	NA	-8	True	ATTAAA	-20	NA	103957190	103950744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103956630
transcript_35051.known	chr12	+	2782	18	FSM	ENSG00000166598.16	ENST00000299767.10	2782	18	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	637.02192604027	30314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTCTTGACTGTCTT	13	True	NA	13	True	AATAAA	-15	NA	103930409	103947926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35052.known	chr12	+	2570	18	FSM	ENSG00000166598.16	ENST00000681698.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1448.09842378987	5828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	16	True	NA	9	True	AATAAA	-11	NA	103930412	103947922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103934160_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35053.known	chr12	+	2713	17	FSM	ENSG00000166598.16	ENST00000680663.1	2713	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	1491.34146696649	6679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	825	False	NA	9	True	AATAAA	-11	NA	103930362	103947922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35054.known	chr12	+	2816	19	FSM	ENSG00000166598.16	ENST00000680370.1	2816	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1830.62059908048	5509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	13	True	NA	9	True	AATAAA	-11	NA	103930409	103947922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103931710_103931749_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35055.known	chr12	+	3248	17	FSM	ENSG00000166598.16	ENST00000680281.1	3248	17	0	0	0	0	multi-exon	FALSE	canonical	3	4394	junction_7	654.688749998807	17795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	820	False	NA	9	True	AATAAA	-11	NA	103930357	103947922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35058.known	chr12	+	3183	10	FSM	ENSG00000139372.15	ENST00000392872.8	3183	10	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_6	65.4309550330974	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	-16	True	NA	17	True	AATAAA	-26	NA	103965871	103988874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_35064.known	chr12	+	1387	9	FSM	ENSG00000139372.15	ENST00000544861.5	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	155.69682077679	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTGTAATTGTAATGTA	1	True	NA	NA	False	NA	NA	NA	103965844	103987194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_35070.known	chr12	+	824	6	FSM	ENSG00000139372.15	ENST00000436021.6	824	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	241.776756533791	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTCAGGGCTCAGTGAG	11	True	NA	NA	False	AATAAA	-35	NA	103965821	103982810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103967853_103967972_103976917_103977061_103979830_103980073_103980892_103980963_103982798
transcript_35071.known	chr12	+	1139	3	FSM	ENSG00000139372.15	ENST00000544060.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_2	6.5	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAATAACAGCAAA	15	True	NA	NA	False	CATAAA	-14	NA	103965902	103980668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103976917_103977061_103979830
transcript_35073.nic	chr12	+	385	2	ISM	ENSG00000139372.15	ENST00000544060.1	1139	3	-84	3608	-3	-3413	5prime_fragment	FALSE	canonical	3	578	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTCACCATGAGAGCT	8	True	NA	NA	False	NA	NA	NA	103965818	103977060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_103966061_103976917
transcript_35074.known	chr12	+	862	2	FSM	ENSG00000139372.15	ENST00000545698.1	862	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAACTGTAAGAAACAT	-2	True	NA	NA	False	NA	NA	NA	103965841	103980473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103979830
transcript_35076.known	chr12	-	1927	11	FSM	ENSG00000120820.13	ENST00000360814.9	1927	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	14.8848916690717	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-35	True	NA	-8	True	AATAAA	-17	NA	104050187	103988986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104021356_104021492_104049894
transcript_3508.known	chr1	-	1473	5	FSM	ENSG00000163867.17	ENST00000373333.1	1473	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.7114788257738	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAACATAAATAAATATAAT	33	True	NA	NA	False	AATAAA	-26	NA	35031690	35018512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35019603_35020382_35020468_35030546_35030714_35031266_35031338_35031630
transcript_35080.nic	chr12	-	2249	10	ISM	ENSG00000120820.13	ENST00000548660.5	1835	11	13539	-293	-457	0	3prime_fragment	FALSE	canonical	3	39	junction_5	9.78661217060213	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	NA	False	NA	-8	True	AATAAA	-17	NA	104050644	103988986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894
transcript_35082.nic	chr12	-	1956	10	ISM	ENSG00000120820.13	ENST00000548660.5	1835	11	13539	0	-457	0	3prime_fragment	FALSE	canonical	3	39	junction_5	9.78661217060213	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAAATTATACCT	NA	False	NA	-2	True	TATAAA	-12	NA	104050644	103989279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894
transcript_35095.known	chr12	+	5660	15	FSM	ENSG00000111727.12	ENST00000229330.9	5660	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	2.93900580163443	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGTGTTATTTATTTT	-12	True	NA	NA	False	AATAAA	-23	NA	104064530	104106524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104064724_104066166_104066316_104067946_104068108_104079444_104079654_104080745_104080831_104082499_104082607_104082712_104082902_104086846_104087015_104087985_104088039_104093385_104093564_104095359_104095564_104096359_104096434_104098342_104098481_104101967_104102154_104102958
transcript_35098.known	chr12	-	1727	8	FSM	ENSG00000120837.8	ENST00000551727.5	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	211.544948666052	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCTTTTAATAAAATATAA	3	True	NA	-42	True	NA	NA	NA	104138017	104119354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104137375
transcript_35101.known	chr12	-	3424	8	FSM	ENSG00000120837.8	ENST00000240055.8	3424	8	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_7	65.09083135535	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAACATTGCTTTCT	-18	True	NA	-6	True	CATAAA	-15	NA	104138210	104117085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104138140
transcript_35102.known	chr12	-	3508	9	FSM	ENSG00000120837.8	ENST00000551446.6	3508	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	265.099509618558	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTAACCTATCATAAAAA	-1	True	NA	-38	True	NA	NA	NA	104138241	104117117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104131753_104131839_104135447_104135533_104138140
transcript_35105.known	chr12	+	3930	15	FSM	ENSG00000198431.17	ENST00000503506.6	3930	15	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	90.0923562410331	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATATCCACGTGTGCCT	NA	False	NA	7	True	ATTAAA	-14	NA	104286681	104350277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104287110_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_35106.known	chr12	+	3974	15	FSM	ENSG00000198431.17	ENST00000526691.5	3974	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	139.318549243327	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	174	False	NA	13	True	ATTAAA	-20	NA	104286880	104350283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104287347_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_35107.nic	chr12	+	3616	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	132.224258129399	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	185	False	NA	13	True	ATTAAA	-20	NA	104286891	104350283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_35108.known	chr12	+	2018	14	FSM	ENSG00000198431.17	ENST00000529546.5	2018	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	167.625286536341	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACGTTAGCAGTTGATT	-16	True	NA	NA	False	NA	NA	NA	104287021	104348828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104287110_104288930_104289041_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_3511.known	chr1	-	2702	4	FSM	ENSG00000163867.17	ENST00000317538.9	2702	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	24.3903441732356	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGTTTACCATTGAATA	35	False	NA	-1	True	ATTAAA	-25	NA	35031905	35017243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35019603_35020382_35020468_35030546_35030714_35031814
transcript_35114.known	chr12	+	3832	15	NNC	ENSG00000198431.17	novel	3930	15	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	206.315008307833	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGTCTTGGGAGTCT	NA	False	NA	35	True	ATTAAA	-42	NA	104286681	104350305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_104287110_104288930_104289041_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352_104348413_104348415
transcript_35118.known	chr12	+	400	5	FSM	ENSG00000198431.17	ENST00000526580.5	400	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	201.162092601961	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGAATCACATTGGCT	19	True	NA	NA	False	NA	NA	NA	104287056	104318943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912
transcript_35119.known	chr12	+	4082	15	NNC	ENSG00000198431.17	novel	3974	15	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_14	197.789828673091	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGTCTTGGGAGTCT	NA	False	NA	35	True	ATTAAA	-42	NA	104286681	104350305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352_104348413_104348415
transcript_35124.nnic	chr12	-	1205	3	Antisense	novelGene_ENSG00000213442.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	55741	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTTTAA	7045	False	NA	NA	False	NA	NA	NA	104273823	104265268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_104265922_104272946_104273304_104273628
transcript_35128.nnic	chr12	+	527	2	Genic_Genomic	ENSG00000213442.5	novel	528	1	NA	NA	-40	76	multi-exon	FALSE	canonical	3	46	junction_1	0	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGGCTGGACAAACT	-8	True	NA	27	True	AATAAA	-39	NA	104265268	104265912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_+_104265342_104265458
transcript_35129.known	chr12	+	528	1	FSM	ENSG00000213442.5	ENST00000462885.1	528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35764	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCAGGGCCCTCGTCC	3	True	NA	-49	True	NA	NA	NA	104265308	104265836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104265300_104265800
transcript_3513.known	chr1	-	2471	3	FSM	ENSG00000163867.17	ENST00000460607.1	2471	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	47	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTCATGGTTTACCAT	93	False	NA	-7	True	ATTAAA	-19	NA	35031847	35017249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35019603_35020382_35020468_35031814
transcript_35130.known	chr12	+	1467	1	FSM	ENSG00000255150.2	ENST00000527879.2	1467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGATATTTGATAATT	-28	True	NA	11	True	AATAAA	-21	NA	104303738	104305205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104303700_104305200
transcript_35131.known	chr12	+	5696	3	FSM	ENSG00000171310.11	ENST00000549260.5	5696	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	16.5	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTTCTGTGTATGGTT	-6	True	NA	8	True	ATTAAA	-16	NA	104456970	104762014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104457515_104601905_104601992_104756948
transcript_35132.known	chr12	-	5443	11	FSM	ENSG00000136052.10	ENST00000258538.8	5443	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGACCTCCAATGCATTG	-6	True	NA	NA	False	AATAAA	-17	NA	104958290	104801800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_104805338_104844471_104844621_104845842_104845975_104861290_104861371_104866431_104866580_104886292_104886440_104889032_104889178_104895273_104895346_104909654_104909763_104927972_104928695_104958087
transcript_35134.known	chr12	-	564	3	FSM	ENSG00000136052.10	ENST00000432951.1	564	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGGTGGTCCAAGTAG	-4	True	NA	NA	False	AGTAAA	-22	NA	104958288	104928491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_104928695_104931631_104931792_104958087
transcript_35135.known	chr12	+	3623	33	FSM	ENSG00000136051.15	ENST00000620430.5	3623	33	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_14	44.4564393535965	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTATTGATGAATTGTT	25	True	NA	NA	False	NA	NA	NA	105107771	105167000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133900_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748_105162846_105164110_105164308_105164640_105164741_105166863
transcript_35138.known	chr12	-	7428	23	FSM	ENSG00000136010.14	ENST00000258494.14	7428	23	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.36486464060395	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAATGGCTTTAATTCAA	-5	True	NA	-4	True	AATAAA	-15	NA	105084458	105019789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_105024480_105026544_105026745_105030323_105030430_105031768_105031935_105034299_105034399_105038102_105038203_105039712_105039807_105040606_105040695_105046709_105046816_105046898_105046970_105049907_105050059_105052089_105052218_105052811_105052932_105058072_105058221_105060980_105061073_105061626_105061753_105062887_105063023_105065266_105065357_105066567_105066670_105068718_105068885_105070569_105070805_105073860_105074006_105084388
transcript_3514.known	chr1	-	922	3	FSM	ENSG00000243749.1	ENST00000373337.3	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	5.5	2573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTCTCTTTTGCCTC	NA	False	NA	-9	True	TATAAA	-12	NA	34985353	34981534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34982120_34983766_34983948_34985197
transcript_35144.known	chr12	+	23524	4	FSM	ENSG00000151131.11	ENST00000552951.7	23524	4	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_3	37.1423687391576	5159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTCCTTCTCTTTA	-4	True	NA	13	True	AATAAA	-16	NA	104986315	105017625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104986468_104988166_104988254_104991711_104991849_104994477
transcript_35147.known	chr12	+	459	3	FSM	ENSG00000151131.11	ENST00000280749.5	459	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	452.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGACATATGTCTGCAA	19	True	NA	5	True	AATAAA	-16	NA	104986338	104994720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104986468_104988166_104988254_104994477
transcript_35149.known	chr12	+	2897	25	FSM	ENSG00000136051.15	ENST00000311317.8	2897	25	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_24	48.7490740652807	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAACAA	-33	True	NA	NA	False	NA	NA	NA	105107713	105147905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105147609
transcript_3515.known	chr1	-	3099	17	FSM	ENSG00000271741.1	ENST00000487874.1	3099	17	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	57.7997621102371	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTCTCTTTTGCCTCAT	-18	True	NA	-7	True	TATAAA	-14	NA	35031741	34981532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34982120_34983766_34983948_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35019352_35019603_35020382_35020468_35030546_35030714_35031630
transcript_35150.known	chr12	+	291	6	FSM	ENSG00000235162.9	ENST00000549934.2	291	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	259.43985815599	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACAGACATTTCCAAGG	6	True	NA	NA	False	NA	NA	NA	105330867	105370680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_105330938_105348601_105348627_105365806_105365843_105366616_105366697_105367476_105367510_105370633
transcript_35151.known	chr12	-	3171	21	FSM	ENSG00000136044.12	ENST00000258530.8	3171	21	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	14.5186087487748	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTAGATGTGGTTATT	-42	True	NA	-7	True	AATAAA	-31	NA	105236174	105173299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_105174449_105176034_105176083_105176875_105177017_105177225_105177263_105188272_105188448_105189771_105189825_105189990_105190156_105195260_105195350_105195444_105195502_105195584_105195628_105197764_105197954_105199372_105199532_105203702_105203786_105207060_105207208_105207970_105208030_105208157_105208200_105211229_105211318_105217068_105217141_105217665_105217726_105229124_105229224_105235958
transcript_35154.known	chr12	+	2277	10	FSM	ENSG00000166046.11	ENST00000299045.8	2277	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	3.7548322774924	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATTTGAAATGTACAAT	-20	True	NA	11	True	AATAAA	-20	NA	106302732	106347003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106335638_106335827_106336031_106336214_106340825_106340999_106346285
transcript_35156.known	chr12	+	1788	7	FSM	ENSG00000166046.11	ENST00000547153.5	1788	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4.87909372276815	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCCCAGTAGAGAATTAC	50	False	NA	NA	False	AATAAA	-23	NA	106302802	106330171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106329329
transcript_35164.known	chr12	-	3121	2	FSM	ENSG00000136026.14	ENST00000378026.5	3121	2	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	0	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCCAGAGTGGTTACAT	-32	True	NA	-16	True	AATAAA	-20	NA	106248020	106237880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106240350_106247368
transcript_35165.known	chr12	+	3198	6	FSM	ENSG00000166046.11	ENST00000546625.5	3198	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.40908153700972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACACACACCAGACTGGA	-22	True	NA	NA	False	GGGGCT	-41	NA	106302817	106325913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509
transcript_35166.known	chr12	+	4183	28	FSM	ENSG00000013503.10	ENST00000228347.9	4183	28	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_11	9.50820885684023	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGCTGCTTTGTCAT	8	True	NA	8	True	NA	NA	NA	106357747	106510198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106357952_106363869_106363903_106366515_106366573_106366657_106366723_106369274_106369351_106369582_106369684_106376358_106376451_106378266_106378385_106380030_106380140_106393030_106393154_106405856_106405977_106410825_106410961_106427196_106427359_106430272_106430474_106432317_106432481_106433718_106433873_106437056_106437132_106437680_106437780_106444462_106444591_106454501_106454712_106457137_106457297_106459250_106459369_106463477_106463621_106496054_106496159_106496751_106496919_106501322_106501437_106504080_106504255_106509419
transcript_35177.nnic	chr12	-	805	3	NIC	ENSG00000257711.2	novel	627	3	NA	NA	-90208	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	4	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGTCCTGATGACCCT	NA	False	NA	NA	False	AATAAA	-19	NA	106774915	106680757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_106681158_106681990_106682170_106774689
transcript_35178.known	chr12	+	5048	10	FSM	ENSG00000111785.21	ENST00000392837.9	5048	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	58.1984684368503	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATATGATATTCCATT	4	True	NA	5	True	AATAAA	-18	NA	106774681	106889316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106885903
transcript_35179.known	chr12	+	2134	9	FSM	ENSG00000111785.21	ENST00000470628.2	2134	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_8	46.3301670081169	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCCTTCCCCTCTTGCT	31	False	NA	NA	False	NA	NA	NA	106774745	106871505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822
transcript_35180.known	chr12	+	2440	9	FSM	ENSG00000111785.21	ENST00000392839.6	2440	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	41.7041289922233	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAACACACACATCCTC	50	False	NA	NA	False	NA	NA	NA	106774639	106886786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106885903
transcript_35188.nic	chr12	+	1183	3	ISM	ENSG00000111785.21	ENST00000470628.2	2134	9	-183	55942	-58	597	5prime_fragment	FALSE	canonical	3	203	junction_2	14.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTCTCTTTTTAAGAG	231	False	NA	23	True	AATATA	-16	NA	106774562	106815563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_106774830_106783996_106784045_106814695
transcript_35189.known	chr12	+	3389	13	FSM	ENSG00000111785.21	ENST00000462949.5	3389	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	80.9771915761195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTGTGTGTTTCTTTA	-1	True	NA	16	True	AATAAA	-25	NA	106774713	106887290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106874480_106874568_106878986_106879126_106879774_106879948_106885903
transcript_35190.known	chr12	-	1469	1	FSM	ENSG00000260329.1	ENST00000570282.1	1469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTGAATCTGTTTCATA	2	True	NA	NA	False	ATTAAA	-18	NA	106955497	106954028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106954000_106955500
transcript_35193.known	chr12	-	715	2	FSM	ENSG00000120832.10	ENST00000548101.1	715	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGTTGAGAAGAATAAGC	9	True	NA	NA	False	NA	NA	NA	106987090	106978178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106978772_106986968
transcript_35194.known	chr12	-	3235	2	FSM	ENSG00000120832.10	ENST00000552029.1	3235	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTTGCTTCTTTCTAG	24	False	106987150	1	True	ATTAAA	-22	NA	106987126	106977548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106978772_106985114
transcript_35195.known	chr12	-	418	3	FSM	ENSG00000120832.10	ENST00000550496.1	418	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATACAACTGATAAACAG	-23	True	NA	NA	False	AATACA	-22	NA	106987122	106978614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106978768_106985114_106985226_106986968
transcript_35197.known	chr12	-	2987	13	FSM	ENSG00000008405.12	ENST00000008527.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_12	18.6741056605724	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTACGTGTTTTTTT	-8	True	NA	-5	True	ATTAAA	-19	NA	107093549	106991363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106992002_106992786_106992891_106992964_106993037_106997293_106997387_106997487_106997691_106997914_106998067_106999550_106999863_106999941_107000083_107001279_107001369_107001763_107001949_107005105_107005249_107022083_107022193_107092803
transcript_35201.nic	chr12	-	1438	6	ISM	ENSG00000008405.12	ENST00000008527.10	2987	13	-26	8579	-26	-154	5prime_fragment	FALSE	canonical	3	174	junction_5	18.7936159373336	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATTCTCTAAAATTAGAG	-5	True	NA	NA	False	NA	NA	NA	107093575	106999942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_107000083_107001279_107001369_107001763_107001949_107005105_107005249_107022083_107022193_107092803
transcript_35207.known	chr12	+	2549	15	FSM	ENSG00000136045.12	ENST00000412830.8	2549	15	0	0	0	0	multi-exon	TRUE	canonical	3	687	junction_8	51.8379047353087	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTATTCTGTTTCTTTGTT	8	True	NA	12	True	ATTAAA	-15	NA	107685798	107713162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466_107697598_107699372_107699435_107702934_107703032_107703684_107703747_107704635_107704748_107708925_107709017_107709110_107709233_107710404_107710511_107712110
transcript_3521.known	chr1	+	3055	11	FSM	ENSG00000197056.11	ENST00000488455.5	3055	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	50.1163645928154	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGAAGAAAAATTCAG	-8	True	NA	NA	False	TTTAAA	-20	NA	35079385	35114636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111775_35111913_35112086_35112131_35112976
transcript_35219.known	chr12	+	851	7	FSM	ENSG00000136045.12	ENST00000552760.5	851	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	301.278064621741	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAGGAAAGAAGG	11	True	NA	NA	False	AGTAAA	-15	NA	107685801	107697578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692971_107693097_107696473_107696585_107697466
transcript_35220.nic	chr12	+	904	7	ISM	ENSG00000136045.12	ENST00000412830.8	2549	15	-72	15578	-72	0	5prime_fragment	FALSE	canonical	3	767	junction_2	36.1324723144647	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGAAAGAAGGTAAAGA	NA	False	NA	NA	False	AGTAAA	-21	NA	107685726	107697584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466
transcript_35225.known	chr12	+	569	5	FSM	ENSG00000136045.12	ENST00000547995.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	346.883626018871	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCAATTTAGAGGTGCAT	17	True	NA	NA	False	NA	NA	NA	107685807	107693075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_107685972_107688451_107688507_107688614_107688803_107692813_107692900_107692999
transcript_35226.known	chr12	-	4182	12	FSM	ENSG00000110851.12	ENST00000228437.10	4182	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	8.48625529462906	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTCCTCTGGTAGTCT	-7	True	NA	NA	False	ATTAAA	-20	NA	107761137	107732870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_107734523_107739382_107739552_107740945_107741261_107742220_107742349_107743196_107743283_107744542_107744662_107746274_107746425_107751414_107752210_107753923_107754110_107756831_107756966_107760504_107760772_107760956
transcript_35233.nnic	chr12	-	1970	2	Genic_Genomic	ENSG00000258072.1	novel	679	1	NA	NA	191	21495	multi-exon	FALSE	canonical	3	19	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTCAGGGCTGAGAA	-8	True	NA	NA	False	AATAAA	-15	NA	107903757	107881774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_-_107882994_107903006
transcript_35239.known	chr12	-	3637	19	FSM	ENSG00000075856.12	ENST00000546728.5	3637	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_12	86.674234000112	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGACGTTCTCTTCA	8	True	NA	-43	True	NA	NA	NA	108561161	108522707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538944_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_35242.known	chr12	-	3704	19	FSM	ENSG00000075856.12	ENST00000228284.8	3704	19	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_15	77.5018916535367	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACGTTCTCTTCAAAAC	10	True	NA	-39	True	NA	NA	NA	108561159	108522703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544533_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_35245.nic	chr12	-	2090	15	ISM	ENSG00000075856.12	ENST00000546815.6	4154	19	-224	7996	3	0	5prime_fragment	FALSE	canonical	3	284	junction_6	37.652004852169	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAGGCCCAGAGAAGC	4010	False	NA	NA	False	AAAAAG	-9	NA	108561397	108530209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_35256.nic	chr12	-	2165	6	ISM	ENSG00000075856.12	ENST00000431469.6	2834	18	-238	18600	3	1057	5prime_fragment	FALSE	canonical	3	292	junction_2	37.6595273470074	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGCCGGGC	4010	False	NA	NA	False	NA	NA	NA	108561397	108542011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_3526.known	chr1	+	4161	10	FSM	ENSG00000197056.11	ENST00000359858.9	4161	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	27.8744982792693	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGATCTTTCCTAATC	-9	True	NA	16	True	ATTAAA	-21	NA	35079384	35115859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_35260.known	chr12	+	3255	3	FSM	ENSG00000198855.7	ENST00000552695.6	3255	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	1.5	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGACTGTCTTATTT	-14	True	NA	NA	False	AATAAA	-19	NA	108515276	108521210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108515362_108516914_108517274_108518399
transcript_35264.known	chr12	+	795	6	FSM	ENSG00000136003.16	ENST00000547005.5	795	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	646.179232102054	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCTTTCAGCCCACTT	-3	True	NA	24	True	AATACA	-24	NA	108562600	108569099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567657_108567744_108568830
transcript_35266.known	chr12	+	1069	6	FSM	ENSG00000136003.16	ENST00000392807.8	1069	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	591.362968066145	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	2	True	NA	11	True	AATAAA	-15	NA	108562605	108569368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108562737_108564059_108564156_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_35268.known	chr12	+	983	5	FSM	ENSG00000136003.16	ENST00000311893.14	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_1	86.2699252346958	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	-8	True	NA	11	True	AATAAA	-15	NA	108562595	108569368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_35273.known	chr12	-	3814	11	FSM	ENSG00000110880.11	ENST00000261401.8	3814	11	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_1	65.0073841959512	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTGTGTTTATTTCA	6	True	NA	NA	False	GATAAA	-18	NA	108731518	108645108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_108647523_108648604_108648851_108648962_108649021_108652271_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_35278.nic	chr12	-	1355	8	ISM	ENSG00000110880.11	ENST00000261401.8	3814	11	-32	6936	-24	0	5prime_fragment	FALSE	canonical	3	546	junction_1	45.9493954125134	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCACTTTTTTTTTTTT	388	False	NA	NA	False	AAAAAG	-11	NA	108731550	108652044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_35280.nic	chr12	-	1282	5	ISM	ENSG00000110880.11	ENST00000261401.8	3814	11	-32	13104	-24	610	5prime_fragment	FALSE	canonical	3	549	junction_1	51.6575260731677	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAATAAATAAA	388	False	NA	NA	False	AATACA	-5	NA	108731550	108658212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_35281.known	chr12	+	3749	13	FSM	ENSG00000135093.13	ENST00000257548.10	3749	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	7.83643555592861	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGGTGTTCTTTTGTA	-22	True	NA	NA	False	AATAAA	-24	NA	109052575	109088023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109052762_109056681_109056792_109057925_109058109_109067523_109067628_109071611_109071711_109072304_109072351_109073437_109073533_109081333_109081394_109081932_109082020_109082662_109082744_109082842_109083063_109084952_109085074_109085666
transcript_35289.known	chr12	-	1030	4	FSM	ENSG00000189046.11	ENST00000343075.7	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	35.4055865020699	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	5	True	NA	-2	True	AATAAA	-17	NA	109093472	109088188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109088513_109090008_109090208_109092506_109092788_109093246
transcript_35290.nic	chr12	-	948	4	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	57.9214026840588	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-16	True	NA	-2	True	AATAAA	-17	NA	109093493	109088188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109088513_109090008_109090208_109092506_109092788_109093349
transcript_35291.known	chr12	-	1180	4	FSM	ENSG00000189046.11	ENST00000429722.3	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	27.9404127862612	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	5	True	NA	-2	True	AATAAA	-17	NA	109093472	109088188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109088513_109090008_109090208_109092506_109092938_109093246
transcript_35292.nic	chr12	-	1236	4	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	54.1623075169029	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	5602	False	NA	-2	True	AATAAA	-17	NA	109093631	109088188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109088513_109090008_109090208_109092506_109092938_109093349
transcript_35295.nic	chr12	-	867	3	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	7	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	5726	False	NA	-1	True	AATAAA	-18	NA	109093507	109088187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109088513_109092506_109092788_109093246
transcript_35297.nic	chr12	-	1012	3	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	15	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	5731	False	NA	-1	True	AATAAA	-18	NA	109093502	109088187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109088513_109092506_109092938_109093246
transcript_35298.known	chr12	-	895	3	FSM	ENSG00000189046.11	ENST00000619381.4	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	13	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-11	True	NA	-1	True	AATAAA	-18	NA	109093488	109088187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109088513_109092506_109092938_109093349
transcript_35300.known	chr12	+	2130	6	FSM	ENSG00000076248.11	ENST00000336865.6	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	928	junction_5	54.2202914046024	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTTAAAAGTTTGT	404	False	NA	5	True	NA	NA	NA	109098117	109110975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_35301.known	chr12	+	2048	7	FSM	ENSG00000076248.11	ENST00000242576.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_1	107.67917883953	2500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	8	True	NA	22	True	AATAAA	-16	NA	109097596	109110992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109097812_109098431_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_35302.known	chr12	+	2016	5	FSM	ENSG00000076248.11	ENST00000446767.2	2016	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	424.724322355101	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	-30	True	NA	22	True	AATAAA	-16	NA	109098150	109110992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109098639_109099188_109099285_109102838_109102928_109103432_109103612_109109828
transcript_35303.known	chr12	+	678	5	FSM	ENSG00000076555.16	ENST00000544726.2	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	3.74165738677394	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAACTTCCGGAGCTGCTG	-3	True	NA	NA	False	NA	NA	NA	109154681	109172311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109154941_109166860_109166994_109167895_109168035_109171804_109171915_109172274
transcript_35305.known	chr12	-	3920	7	FSM	ENSG00000110906.13	ENST00000228495.11	3920	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	41.4705384044572	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGGCTCTTTTC	9	True	NA	-5	True	AATAAA	-15	NA	109477300	109448654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109460635_109460806_109469514_109469729_109477259
transcript_35308.known	chr12	-	491	5	FSM	ENSG00000110906.13	ENST00000540355.5	491	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	117.467016647227	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGGACGAGGAGCGGGA	NA	False	NA	NA	False	NA	NA	NA	109458871	109451681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109458848
transcript_35310.known	chr12	+	5620	28	FSM	ENSG00000151148.14	ENST00000434735.6	5620	28	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_15	45.870994627849	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCGTTCTGCATTTCA	7	True	NA	17	True	ATTAAA	-20	NA	109477401	109536705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109491044_109491128_109497817_109497924_109498232_109498354_109499632_109499811_109501370_109501535_109503022_109503191_109507563_109507736_109509595_109509715_109510343_109510459_109511203_109511304_109516764_109516885_109521147_109521325_109521440_109521552_109523977_109524116_109524437_109524504_109526357_109526417_109529889_109530073_109530546_109530659_109533465_109533559_109534590
transcript_35312.known	chr12	+	1448	9	FSM	ENSG00000151148.14	ENST00000340074.9	1448	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	48.2686168747355	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	17	True	NA	7	True	ATTAAA	-17	NA	109477651	109490722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_35314.known	chr12	+	1541	9	FSM	ENSG00000151148.14	ENST00000540230.5	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	63.4821579264599	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGCATGTTCTTGAA	18	False	NA	NA	False	AAGAAA	-11	NA	109477652	109491149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109477777_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_35317.known	chr12	+	3600	8	FSM	ENSG00000151148.14	ENST00000537063.1	3600	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	36.8349878041328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTCA	20	False	NA	NA	False	NA	NA	NA	109477654	109492737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918
transcript_35319.nic	chr12	+	944	8	NIC	ENSG00000151148.14	novel	1120	9	NA	NA	-6	-83	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	61.8269474304807	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGTCTTTAAATTTTA	-13	True	NA	4	True	ATTAAA	-16	NA	109477621	109490639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_109477765_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_35322.nic	chr12	+	1417	7	ISM	ENSG00000151148.14	ENST00000536398.5	1120	9	-241	1679	-8	-1679	5prime_fragment	FALSE	canonical	3	83	junction_1	39.2003401345788	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTGGTAAGTGTC	-1	True	NA	NA	False	TATAAA	-5	NA	109477393	109489043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571
transcript_35324.nic	chr12	+	734	6	ISM	ENSG00000151148.14	ENST00000536398.5	1120	9	-9	4126	-2	2575	5prime_fragment	FALSE	canonical	3	83	junction_1	42.897086148129	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGCAAAACCAGAAA	-9	True	NA	NA	False	NA	NA	NA	109477625	109486596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470
transcript_35327.known	chr12	+	2833	11	FSM	ENSG00000110921.14	ENST00000228510.8	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	17.8672885463911	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACTAGGCGTGTTTA	-9	True	NA	NA	False	CATAAA	-31	NA	109573793	109598125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35328.known	chr12	+	1770	10	FSM	ENSG00000110921.14	ENST00000392727.7	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	33.505481401565	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	34	True	NA	14	True	AATAAA	-16	NA	109573836	109597261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35331.known	chr12	-	1188	10	FSM	ENSG00000139428.12	ENST00000537496.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	65.9848467452945	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCGTGTGTGTGTG	9	True	NA	-6	True	AATAAA	-11	NA	109573503	109556702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_35332.known	chr12	+	1644	9	FSM	ENSG00000110921.14	ENST00000447878.6	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	35.3579906103274	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAAAAAGATTTTGT	-10	True	NA	-11	True	NA	NA	NA	109573792	109597236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35333.known	chr12	-	1089	9	FSM	ENSG00000139428.12	ENST00000544051.5	1089	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	77.0158262956387	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATGAGAAGGAGCT	-2	True	NA	-54	True	AATGAA	-32	NA	109573514	109556750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109573346
transcript_35335.known	chr12	-	4090	9	FSM	ENSG00000139428.12	ENST00000545712.7	4090	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	19.4321737075398	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	8	True	NA	NA	False	AATAAA	-40	NA	109573504	109553714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_35336.known	chr12	-	1252	9	FSM	ENSG00000139428.12	ENST00000541763.6	1252	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	53.1789432012333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGCTGCAATGAGAAGGA	72	False	NA	-57	True	AATGAA	-29	NA	109573480	109556753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_35338.nic	chr12	-	1095	8	NIC	ENSG00000139428.12	novel	4090	9	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	58.2604987473135	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGTGTGTGTGTGTGTG	-1	True	NA	0	True	AATAAA	-17	NA	109573553	109556696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109573346
transcript_35346.known	chr12	-	650	4	FSM	ENSG00000139428.12	ENST00000536760.1	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	20.6074420214316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTTAGCTACTCAGGA	29	True	NA	NA	False	NA	NA	NA	109573483	109564819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109565177_109568769_109568864_109571648_109571711_109573346
transcript_3535.known	chr1	+	3980	9	FSM	ENSG00000197056.11	ENST00000373329.5	3980	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	37.3210312692455	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTTTTGATCTTTCC	-3	True	NA	11	True	ATTAAA	-16	NA	35079390	35115854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35079443_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_35350.known	chr12	-	1342	3	FSM	ENSG00000139428.12	ENST00000537236.2	1342	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	23	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGTTAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	109573580	109567817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109568864_109571648_109571711_109573346
transcript_35352.known	chr12	-	945	7	FSM	ENSG00000139428.12	ENST00000540016.5	945	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	65.1809447273937	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGTGTGTGTGTGTGTG	15	True	NA	0	True	AATAAA	-17	NA	109573497	109556696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109573346
transcript_35353.known	chr12	+	1591	8	FSM	ENSG00000110921.14	ENST00000629016.2	1591	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	37.3887465335084	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGACTCCAGGCCACC	1	False	NA	15	True	AATAAA	-17	NA	109574806	109597262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35356.known	chr12	-	2407	5	FSM	ENSG00000139433.11	ENST00000318348.9	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	6.83282518435822	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	-2	True	NA	-9	True	AATAAA	-22	NA	109880541	109850944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_35358.nnic	chr12	-	809	5	NNC	ENSG00000139433.11	novel	2407	5	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	95.4279833172639	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATCTGTGCACTGTATT	99	False	NA	-12	True	AATAAA	-19	NA	109880440	109850947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_109851244_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_35361.known	chr12	-	5444	19	FSM	ENSG00000139436.22	ENST00000361006.9	5444	19	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	21.1479940968638	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	10	True	NA	-11	True	AATAAA	-16	NA	109996304	109929803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_35362.known	chr12	-	2989	15	FSM	ENSG00000139436.22	ENST00000547815.5	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	22.3373942901465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAATGGGAGAAGCGAG	18	True	NA	NA	False	NA	NA	NA	109996296	109947321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109948847_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_35363.known	chr12	+	3096	13	FSM	ENSG00000139437.18	ENST00000405876.9	3096	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_4	6.12542515531235	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCCTGGCTTTGTTAC	-6	True	NA	23	True	AATAAA	-18	NA	109900273	109918069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571_109906641_109907525_109907700_109908585_109908699_109908870_109908938_109911062_109911236_109912990_109913073_109914441_109914628_109915402_109915547_109916590
transcript_35366.nic	chr12	+	1033	5	ISM	ENSG00000139437.18	ENST00000405876.9	3096	13	-358	11432	-348	0	5prime_fragment	FALSE	canonical	3	55	junction_4	8.55496931613434	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTGGTATGTGGCTCT	NA	False	NA	NA	False	AAGAAA	-6	NA	109899915	109906637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571
transcript_35368.known	chr12	+	853	4	FSM	ENSG00000139437.18	ENST00000537218.1	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	5.55777733351102	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGACATGGTTTCTGCT	-16	True	NA	NA	False	NA	NA	NA	109900263	109905027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736
transcript_35369.known	chr12	+	973	5	FSM	ENSG00000139437.18	ENST00000536408.2	973	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	30.0998338865848	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTGGTATGTGGCTCT	28	False	NA	NA	False	AAGAAA	-6	NA	109900608	109906637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109901060_109903026_109903215_109903936_109904148_109904736_109904794_109906571
transcript_35375.known	chr12	-	496	3	FSM	ENSG00000174456.16	ENST00000551185.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGACCTTTGGTCTG	NA	False	NA	NA	False	NA	NA	NA	110048565	110042280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110042460_110044419_110044534_110048362
transcript_35376.known	chr12	-	1755	2	FSM	ENSG00000174456.16	ENST00000546651.3	1755	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGCTGAATTCAACA	-3	True	NA	4	True	GATAAA	-24	NA	110048555	110027027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110028590_110048362
transcript_35377.known	chr12	-	724	2	FSM	ENSG00000174456.16	ENST00000615315.2	1443	2	1	718	1	87	multi-exon	FALSE	canonical	3	83	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGTTGCAAAGTGGTGT	-13	True	NA	NA	False	NA	NA	NA	110048521	110041894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110042460_110048362
transcript_35379.known	chr12	+	2710	19	FSM	ENSG00000122970.16	ENST00000552912.5	2710	19	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_1	31.2471727116092	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTATTTAAAAAATGTA	-28	True	NA	1	True	AATAAA	-16	NA	110124334	110218775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110124444_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_35380.known	chr12	+	3124	19	FSM	ENSG00000122970.16	ENST00000242591.10	3124	19	0	0	0	0	multi-exon	FALSE	canonical	2	79	junction_1	32.4161311009743	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTTGTGTCAAA	-6	True	NA	19	True	AATAAA	-34	NA	110124356	110218793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_35390.known	chr12	+	3048	12	FSM	ENSG00000122970.16	ENST00000361948.8	3048	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	57.4552646675353	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAATGAGCCTCCCTG	-28	True	NA	NA	False	AGTAAA	-16	NA	110124334	110169182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110167870
transcript_35401.known	chr12	+	8295	20	FSM	ENSG00000174437.18	ENST00000539276.7	8295	20	0	0	0	0	multi-exon	FALSE	canonical	2	328	junction_12	52.6521538731249	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGTGGTGGTGACT	-23	True	NA	NA	False	AATAAA	-17	NA	110281246	110351093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200
transcript_35403.known	chr12	+	264	3	FSM	ENSG00000174437.18	ENST00000553144.1	264	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTACCAACCCTGTGCAT	897	False	NA	NA	False	NA	NA	NA	110346200	110350373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110346322_110347392_110347454_110350291
transcript_35410.known	chr12	-	3023	11	FSM	ENSG00000196510.14	ENST00000455511.9	3023	11	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_7	39.0466387797977	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTCTTTCAGTCTA	-12	True	NA	-2	True	AAAAAG	-3	NA	110403708	110372899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_35417.known	chr12	-	2200	10	FSM	ENSG00000196510.14	ENST00000450008.3	2200	10	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_6	37.2870082958438	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACAGAAGTGGTTTCTT	-34	True	NA	NA	False	AATAAA	-20	NA	110403730	110375476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_35439.known	chr12	-	734	4	FSM	ENSG00000196510.14	ENST00000464697.1	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	160.277537068951	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTCTCTGGGATGTGT	7	True	NA	NA	False	AAAAAG	-31	NA	110403689	110387628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110387893_110395100_110395221_110396265_110396453_110403526
transcript_35444.known	chr12	-	946	7	FSM	ENSG00000111229.16	ENST00000228825.12	946	7	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_6	127.388731404661	15328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAGTGTACAATTCA	-5	True	NA	53	True	GATAAA	-20	NA	110450337	110434822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110435218_110436109_110436205_110436556_110436684_110437083_110437153_110440311_110440389_110445451_110445552_110450254
transcript_35445.known	chr12	-	555	3	FSM	ENSG00000111229.16	ENST00000471641.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	936	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATTATATATATTTT	47	False	NA	NA	False	AATAAA	-24	NA	110450285	110442643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110443068_110445451_110445552_110450254
transcript_35447.known	chr12	-	1491	8	FSM	ENSG00000111231.9	ENST00000537466.6	1491	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	223.69841213526	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTGCAGTGTCTAATT	-11	True	NA	-16	True	TATAAA	-42	NA	110468264	110452488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468125
transcript_3545.nic	chr1	+	820	6	ISM	ENSG00000197056.11	ENST00000488455.5	3055	11	-39	10233	-35	6809	5prime_fragment	FALSE	canonical	3	12	junction_1	52.50752327048	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTACCATATGTAC	NA	False	NA	NA	False	AAAAAG	-5	NA	35079346	35104403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_35079443_35093319_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294
transcript_35452.known	chr12	-	1604	8	FSM	ENSG00000111231.9	ENST00000543199.5	1604	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	220.949712627566	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCAGTGTCTAATTTG	547	False	NA	-14	True	TATAAA	-44	NA	110468721	110452486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468471
transcript_35470.known	chr12	-	564	5	FSM	ENSG00000111231.9	ENST00000550974.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	277.034632311558	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAAAAGGAAATTGA	-11	True	NA	NA	False	AGTAAA	-1	NA	110468264	110455837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468195
transcript_35473.known	chr12	+	375	1	FSM	ENSG00000241680.1	ENST00000490759.1	375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGATCGTCAAATACATC	24	False	NA	NA	False	NA	NA	NA	110460987	110461362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110461000_110461400
transcript_35474.known	chr12	-	1457	8	FSM	ENSG00000111231.9	ENST00000228827.8	1457	8	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_4	43.0377148319841	2145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGTGTCTAATTTGA	-4	True	NA	-13	True	TATAAA	-45	NA	110468257	110452485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468155
transcript_35475.known	chr12	+	1101	7	FSM	ENSG00000204856.12	ENST00000377673.10	1101	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	21.646144126739	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	-17	True	NA	12	True	ATTAAA	-18	NA	110468844	110490385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486455_110486533_110486718_110487860_110487944_110490018
transcript_35476.known	chr12	+	792	4	FSM	ENSG00000204856.12	ENST00000546396.1	792	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	89.9641904068255	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	NA	False	NA	12	True	ATTAAA	-18	NA	110486300	110490385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110486459_110486533_110486718_110487860_110487944_110490018
transcript_35478.known	chr12	-	1059	6	FSM	ENSG00000111237.19	ENST00000546588.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	883.81455068357	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAATCTAGACTTTCTT	6	True	NA	-74	True	NA	NA	NA	110502092	110491690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110501416_110501560_110502048
transcript_3548.known	chr1	+	4203	11	FSM	ENSG00000197056.11	ENST00000373330.1	4203	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5487955176172	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGATCTTTCCTAATC	-3	True	NA	16	True	ATTAAA	-21	NA	35079390	35115859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35079443_35093393_35093442_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_35481.known	chr12	-	996	5	FSM	ENSG00000111237.19	ENST00000447578.6	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	901.522046319445	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGATAACCTGTATT	20	True	NA	-8	True	AATAAA	-17	NA	110502078	110491624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110502048
transcript_35498.known	chr12	-	1124	5	FSM	ENSG00000111237.19	ENST00000621131.4	1124	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	894.306540007396	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCTTCTCTTACATTG	595	False	NA	-26	True	ATTAAA	-20	NA	110501503	110491525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110501416
transcript_35513.known	chr12	-	1531	4	FSM	ENSG00000111237.19	ENST00000549578.6	1531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1497	junction_3	162.485554913523	7025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAACAAAAAAAAAACAAA	-13	True	NA	NA	False	AAAACA	-4	NA	110502111	110491082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110502048
transcript_35514.known	chr12	-	818	5	FSM	ENSG00000111237.19	ENST00000549970.5	818	5	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	881.41987724353	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCTTCTCTGTTAATA	-13	True	NA	33	True	AGTAAA	-7	NA	110502111	110491885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499456_110499547_110502048
transcript_35515.known	chr12	-	1091	5	FSM	ENSG00000111237.19	ENST00000360579.11	1091	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	860.546919115977	1516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	-1	True	NA	-23	True	ATTAAA	-23	NA	110502099	110491522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110502048
transcript_35516.known	chr12	-	1057	5	FSM	ENSG00000111237.19	ENST00000552130.6	1057	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	904.850091175328	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGATAACCTGTATTT	2552	False	NA	-7	True	AATAAA	-18	NA	110499546	110491623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110499456
transcript_35521.known	chr12	+	1988	15	FSM	ENSG00000204852.17	ENST00000495659.6	1988	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	29.8807152333598	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	-27	True	NA	28	True	ATTAAA	-18	NA	110614106	110649128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614464_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_3553.nic	chr1	+	703	5	ISM	ENSG00000197056.11	ENST00000359858.9	4161	10	-43	11456	-40	6809	5prime_fragment	FALSE	canonical	3	52	junction_1	39.0576496988746	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTACCATATGTAC	NA	False	NA	NA	False	AAAAAG	-5	NA	35079341	35104403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294
transcript_35533.known	chr12	-	1685	8	FSM	ENSG00000122986.14	ENST00000242607.13	1685	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	13.1738764381697	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCCAAGACTCCACTATA	9	True	NA	86	True	NA	NA	NA	110689115	110648685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689079
transcript_35535.nic	chr12	-	1600	8	NIC	ENSG00000122986.14	novel	1685	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_7	23.9148148089618	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTTTCCCTGGACC	-8	True	NA	-25	True	AATAAA	-22	NA	110689787	110648796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689725
transcript_35545.known	chr12	+	1919	4	FSM	ENSG00000204852.17	ENST00000478122.6	1919	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	37.1872140511882	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGCATTAGGAGAAACAC	-8	True	NA	NA	False	NA	NA	NA	110614125	110630095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614464_110619835_110619957_110626361_110626493_110628766
transcript_35547.known	chr12	+	926	3	FSM	ENSG00000204852.17	ENST00000546643.1	926	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	36.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACTATCATCAGAGTGA	-10	True	NA	NA	False	ATTAAA	-24	NA	110614123	110629282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110626361_110626493_110628766
transcript_35548.known	chr12	+	593	3	FSM	ENSG00000204852.17	ENST00000552318.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCTGAACTTGATTGA	0	True	NA	NA	False	NA	NA	NA	110614062	110628918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110626361_110626493_110628796
transcript_35549.known	chr12	+	1879	15	FSM	ENSG00000204852.17	ENST00000397655.7	1879	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	33.0448056988306	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	-21	True	NA	28	True	ATTAAA	-18	NA	110614112	110649128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634395_110634464_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_35550.known	chr12	+	1583	12	FSM	ENSG00000204852.17	ENST00000377654.5	1583	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	26.01684133514	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTGAGGAAACTACGCC	-21	True	NA	NA	False	NA	NA	NA	110614112	110647893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110644991_110645130_110647210_110647337_110647748
transcript_35551.known	chr12	+	2098	16	FSM	ENSG00000204852.17	ENST00000397656.8	2098	16	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_11	33.1092467782374	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGTCCAGCTTTGTT	-28	True	NA	25	True	ATTAAA	-15	NA	110614105	110649125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628051_110628225_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_35552.known	chr12	+	1531	12	FSM	ENSG00000204852.17	ENST00000549123.6	1531	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	26.4996491478411	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	-21	True	NA	28	True	ATTAAA	-18	NA	110614112	110649128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110647210_110647337_110647748_110647894_110649042
transcript_35553.known	chr12	+	2301	5	FSM	ENSG00000204852.17	ENST00000680203.1	2301	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	33.1247641501038	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAATTCTGAATAGAGG	-8	True	NA	-4	True	AATAAA	-14	NA	110614125	110630243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110627929_110628225_110628766
transcript_35554.known	chr12	+	1891	16	FSM	ENSG00000204852.17	ENST00000480648.5	1891	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	31.6852577006335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTACATTCGGTGAG	34	True	NA	-15	True	AATATA	-14	NA	110614167	110649085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634395_110634464_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_35557.nic	chr12	+	793	4	ISM	ENSG00000173093.13	ENST00000308208.10	1966	12	-221	48772	-3	-22509	5prime_fragment	FALSE	canonical	2	6	junction_1	3.74165738677394	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGAGAAGGTGTGGTC	NA	False	NA	NA	False	ATTAAA	-25	NA	110846765	110858763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_110847106_110852858_110852964_110853404_110853575_110858585
transcript_35559.nic	chr12	+	682	3	ISM	ENSG00000173093.13	ENST00000545036.5	1887	11	-188	48771	3	-22509	5prime_fragment	FALSE	canonical	3	10	junction_1	1	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGAGAAGGTGTGGTC	NA	False	NA	NA	False	ATTAAA	-25	NA	110846771	110858763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_110847106_110853404_110853575_110858585
transcript_35560.nic	chr12	+	604	3	ISM	ENSG00000173093.13	ENST00000552694.1	1651	10	51904	0	51904	0	3prime_fragment	FALSE	canonical	1	2	junction_1	2	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCGTGCCTGTCACACAC	NA	False	NA	NA	False	AATAAA	-15	NA	110898930	110907535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_110899126_110904587_110904792_110907330
transcript_35562.nnic	chr12	-	308	2	Antisense	novelGene_ENSG00000173093.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTGTTTCAGCCGTTTC	NA	False	NA	NA	False	AATAAA	-27	NA	110861057	110860571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_110860753_110860930
transcript_35564.known	chr12	-	783	7	FSM	ENSG00000111245.17	ENST00000228841.15	783	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.372677996249965	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTCACGACATTTCTCT	-3	True	NA	NA	False	AATAAA	-15	NA	110920579	110910844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110911176_110913095_110913145_110913245_110913325_110914185_110914291_110915714_110915791_110919103_110919194_110920526
transcript_35566.known	chr12	+	1044	3	FSM	ENSG00000185847.9	ENST00000654512.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGTGTAAGGAAGAAAA	-7	True	NA	NA	False	AATATA	-34	NA	110936573	110943763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110943067
transcript_35570.known	chr12	+	717	3	FSM	ENSG00000185847.9	ENST00000548368.6	717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCTAAAATTTTCTGA	2	True	NA	NA	False	NA	NA	NA	110936582	110943701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110943323
transcript_35575.known	chr12	+	674	3	FSM	ENSG00000185847.9	ENST00000547607.2	1834	3	24	1136	5	-1132	multi-exon	FALSE	canonical	0	0	junction_2	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCGTGTTCTCTCTCT	26	False	NA	NA	False	NA	NA	NA	110936606	110956832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110956473
transcript_35576.known	chr12	+	1416	3	FSM	ENSG00000185847.9	ENST00000553177.6	1416	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTTTGACAATATGTTAA	-3	True	NA	NA	False	ACTAAA	-24	NA	110936577	110959093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110958021
transcript_35579.known	chr12	+	1319	2	FSM	ENSG00000185847.9	ENST00000666099.2	1323	2	4	0	-2	0	multi-exon	FALSE	canonical	3	17	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTATCATGTTACACGTT	6	True	NA	NA	False	AATAAA	-16	NA	110936586	110939496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289
transcript_35583.known	chr12	+	1607	2	FSM	ENSG00000185847.9	ENST00000657482.1	1607	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGACTCCTTT	2	True	NA	NA	False	AATAAA	-20	NA	110936582	110957964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110956473
transcript_35584.known	chr12	+	364	2	FSM	ENSG00000185847.9	ENST00000331096.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTAGATTTCAT	21	False	NA	NA	False	AATAAA	-21	NA	110936601	110937451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110937184
transcript_35585.known	chr12	+	942	3	FSM	ENSG00000185847.9	ENST00000658709.1	942	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCATCTTGGTGTCTGCT	-1	True	NA	NA	False	AATAAA	-16	NA	110936579	110942389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110941789
transcript_35587.nnic	chr12	+	660	4	NNC	ENSG00000111249.14	novel	6703	22	NA	NA	-20	-52107	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	8.83176086632785	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGACCTTGAACAAACC	176	False	NA	NA	False	AATAAA	-21	NA	111034144	111218547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_111034241_111214199_111214311_111217889_111217938_111218142
transcript_35589.nnic	chr12	-	459	2	Antisense	novelGene_ENSG00000111249.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGTGTTATATCGATGT	NA	False	NA	NA	False	AATAAA	-15	NA	111035515	111031426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_111031766_111035395
transcript_3559.nic	chr1	+	537	4	ISM	ENSG00000197056.11	ENST00000373329.5	3980	9	-53	11451	-44	6809	5prime_fragment	FALSE	canonical	3	22	junction_1	57.1567046713585	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTACCATATGTAC	NA	False	NA	NA	False	AAAAAG	-5	NA	35079337	35104403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_35079443_35095818_35095892_35097316_35097567_35104294
transcript_35591.nnic	chr12	+	375	4	NNC	ENSG00000257595.3	novel	335	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.88561808316413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTGGGGTCTCAGCG	NA	False	NA	10	True	AATAAA	-13	NA	111369260	111403307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_111369321_111371968_111372071_111396830_111396874_111403137
transcript_35592.known	chr12	+	335	3	FSM	ENSG00000257595.3	ENST00000552663.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGGGTCTCAGCGAGC	NA	False	NA	13	True	AATAAA	-16	NA	111369260	111403310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111369321_111371968_111372071_111403137
transcript_35594.known	chr12	+	9561	13	FSM	ENSG00000111275.13	ENST00000261733.7	9561	13	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	46.9209589510795	1300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGTGATATTCTTTA	-11	True	NA	NA	False	ATTAAA	-16	NA	111766932	111817532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111767097_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_3560.known	chr1	+	508	4	FSM	ENSG00000197056.11	ENST00000466390.5	508	4	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_2	65.6878138537803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCCTACCTTGTTCTT	-12	True	NA	NA	False	NA	NA	NA	35079381	35097594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35079443_35093913_35094010_35095818_35095892_35097316
transcript_35603.known	chr12	+	2951	18	FSM	ENSG00000111271.15	ENST00000413681.7	2951	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_17	22.7308609938667	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGCTATTGCTCACAG	-10	True	NA	NA	False	AATAAA	-18	NA	111686067	111749132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749010
transcript_35604.known	chr12	+	4006	21	FSM	ENSG00000111271.15	ENST00000313698.9	4006	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	14.8521883909409	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	-25	True	NA	14	True	AGTAAA	-15	NA	111686052	111757099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
transcript_35607.known	chr12	-	543	4	FSM	ENSG00000234608.9	ENST00000590479.6	772	4	220	9	0	-4	multi-exon	FALSE	canonical	3	32	junction_3	61.3967063901278	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTTTACTTACTTTGAG	251	False	NA	-18	True	AATAAA	-13	NA	111841710	111839776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840004_111840332_111840478_111841326_111841471_111841683
transcript_35611.known	chr12	-	852	3	FSM	ENSG00000234608.9	ENST00000656227.2	1067	3	210	5	20	0	multi-exon	FALSE	canonical	3	32	junction_2	73.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACTTACTTTGAGTCTT	275	False	NA	-14	True	AATAAA	-17	NA	111841686	111839772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840478_111841326_111841471_111841683
transcript_35613.known	chr12	-	662	3	FSM	ENSG00000234608.9	ENST00000442119.7	686	3	19	5	-7	0	multi-exon	FALSE	canonical	3	22	junction_2	28	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	-3	True	NA	-9	True	AATAAA	-22	NA	111841964	111839767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840004_111840332_111840478_111841683
transcript_35617.nnic	chr12	-	677	3	FSM	ENSG00000234608.9	ENST00000688987.1	627	3	-50	0	3	0	multi-exon	FALSE	canonical	3	32	junction_2	24.5	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	NA	False	NA	-9	True	AATAAA	-22	NA	111841980	111839767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840004_111841326_111841471_111841683
transcript_35620.known	chr12	-	930	2	FSM	ENSG00000234608.9	ENST00000443596.2	986	2	53	3	-5	1	multi-exon	FALSE	canonical	3	22	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	59	False	NA	-8	True	AATAAA	-23	NA	111841902	111839766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840478_111841683
transcript_35622.known	chr12	-	605	2	FSM	ENSG00000234608.9	ENST00000609228.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTATGTGAGAATAAATA	255	False	NA	-48	True	NA	NA	NA	111841706	111839806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840032_111841326
transcript_35627.nic	chr12	-	1699	12	NIC	ENSG00000198270.13	novel	1716	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	14.6287388383278	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-17	True	NA	-13	True	AATAAA	-18	NA	112013165	111931297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111965594_111965760_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_35633.nic	chr12	-	1635	11	NIC	ENSG00000198270.13	novel	1716	13	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_8	14.5811522178462	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-17	True	NA	-13	True	AATAAA	-18	NA	112013165	111931297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111965594_111965760_111991757_111991890_112005256_112005304_112013001
transcript_35637.known	chr12	-	1534	11	FSM	ENSG00000198270.13	ENST00000552374.7	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	9.61301201497221	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-17	True	NA	-13	True	AATAAA	-18	NA	112013165	111931297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_35650.known	chr12	-	1446	10	FSM	ENSG00000198270.13	ENST00000550831.7	1446	10	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_3	7.38533749239283	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTACTCCATGGTTGC	23	True	NA	3	True	AATAAA	-34	NA	112013125	111931281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_35655.known	chr12	-	1403	10	FSM	ENSG00000198270.13	ENST00000355445.7	1403	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	14.4179243724565	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	9	True	NA	-13	True	AATAAA	-18	NA	112013139	111931297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_35662.nic	chr12	-	1395	10	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	14.5907124188262	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-17	True	NA	-13	True	AATAAA	-18	NA	112013165	111931297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_35669.nic	chr12	-	1366	9	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	14.106182155353	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-18	True	NA	-13	True	AATAAA	-18	NA	112013166	111931297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111991757_111991890_112005256_112005304_112013001
transcript_35673.known	chr12	-	1229	9	FSM	ENSG00000198270.13	ENST00000549537.6	1229	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	14.2038727113418	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTACCTTGATGGATA	13	True	NA	-85	True	NA	NA	NA	112013135	111931369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_35688.nic	chr12	-	1287	8	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	18.805123053605	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	NA	False	NA	-13	True	AATAAA	-18	NA	112013226	111931297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111991757_111991890_112005256_112005304_112013001
transcript_35708.known	chr12	-	511	4	FSM	ENSG00000198270.13	ENST00000552839.6	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	16.4384373412506	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTGTTTAAAAATACTT	-17	True	NA	NA	False	NA	NA	NA	112013165	111965591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111965760_111991757_111991890_112005256_112005304_112013001
transcript_35714.nic	chr12	-	806	2	ISM	ENSG00000198270.13	ENST00000552800.2	485	3	-22	1094	0	-1094	5prime_fragment	FALSE	canonical	3	48	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTGGCATGGCCT	-18	True	NA	NA	False	ATTAAA	-4	NA	112013166	112004662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_112005304_112013001
transcript_35715.known	chr12	-	2761	1	FSM	ENSG00000198270.13	ENST00000437003.3	2761	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCATTGTCCACGTACC	0	True	NA	-6	True	AATAAA	-21	NA	112013185	112010424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112010400_112013200
transcript_35729.known	chr12	+	916	2	FSM	ENSG00000089248.7	ENST00000553161.1	916	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAAAAATTAGCTG	-11	True	NA	NA	False	NA	NA	NA	112013428	112015325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112013610_112014590
transcript_35732.known	chr12	+	1623	3	FSM	ENSG00000089248.7	ENST00000261735.4	1623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1769	junction_2	104	12910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTTTCTTCAGAC	-14	True	NA	NA	False	AATAAA	-44	NA	112013425	112023449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112013610_112019755_112019895_112022149
transcript_35733.known	chr12	+	1333	2	FSM	ENSG00000089248.7	ENST00000455836.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	6458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAATATATTGAACCAA	NA	False	NA	NA	False	NA	NA	NA	112013347	112023220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112013610_112022149
transcript_35735.known	chr12	-	2815	23	FSM	ENSG00000111300.10	ENST00000551858.1	2815	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	53.4921211468884	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAGAAA	9	True	NA	NA	False	ACTAAA	-6	NA	112108779	112039269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112097240_112097442_112108715
transcript_35740.known	chr12	-	5771	24	FSM	ENSG00000111300.10	ENST00000261745.9	5771	24	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_9	20.2703840321064	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGGTTCCTTTTT	5	True	NA	1	True	TATAAA	-22	NA	112108783	112026688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112029654_112033232_112033380_112039228_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_35741.known	chr12	-	5815	23	FSM	ENSG00000111300.10	ENST00000552527.5	5815	23	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_8	20.6382157759149	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAACTTTGTGTGTGTCTG	3	True	NA	-5	True	CATAAA	-19	NA	112108785	112027787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112029654_112033232_112033380_112039228_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_35743.known	chr12	+	2633	12	FSM	ENSG00000135148.12	ENST00000412615.7	2633	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	23.7211765069955	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTCTTGTGGTTCCTT	10	True	NA	15	True	AATAAA	-19	NA	112125559	112153604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_35744.nnic	chr12	+	1865	11	NNC	ENSG00000135148.12	novel	2633	12	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	90.9026402256832	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTCTTGTGGTTCCTT	-4	True	NA	15	True	AATAAA	-19	NA	112125502	112153604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112151933_112153278
transcript_35746.known	chr12	+	1003	5	FSM	ENSG00000135148.12	ENST00000550051.5	1003	5	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	11.5108644332213	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTTGGCTTTTGAAG	-12	True	NA	NA	False	NA	NA	NA	112125537	112141491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818
transcript_35748.nnic	chr12	-	1852	7	Fusion	ENSG00000089009.16_ENSG00000213152.5	novel	921	7	NA	NA	294	64	multi-exon	FALSE	canonical	0	0	junction_1	3913.60485997245	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAGCTAGCTGAAGAA	8305	False	NA	NA	False	CATAAA	-35	NA	112408658	112301805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_112302751_112405185_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419
transcript_35749.nnic	chr12	-	1900	7	Fusion	ENSG00000089009.16_ENSG00000213152.5	novel	921	7	NA	NA	294	73	multi-exon	FALSE	non_canonical	0	0	junction_1	3913.60485997245	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGCTGAAGAAATAGAGTAA	8305	False	NA	NA	False	CATAAA	-44	NA	112408658	112301796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_112302790_112405185_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419
transcript_35750.known	chr12	-	794	1	FSM	ENSG00000213152.5	ENST00000469026.2	794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATACTGTTGAGTTTTC	NA	False	NA	NA	False	ACTAAA	-10	NA	112302663	112301869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112301900_112302700
transcript_35751.known	chr12	+	6073	16	FSM	ENSG00000179295.19	ENST00000351677.7	6073	16	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_6	68.2894493233683	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGTTTGCTTCATCAG	5	True	NA	4	True	AATAAA	-23	NA	112418946	112509918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474_112486630_112488442_112488511_112489023_112489176_112502143_112502257_112504694_112504797_112505824
transcript_35753.known	chr12	+	1876	11	FSM	ENSG00000179295.19	ENST00000392597.5	1876	11	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_6	68.8941942401535	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTTTCTCCTTATT	2	True	NA	NA	False	ATTAAA	-15	NA	112418908	112486923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474
transcript_35758.known	chr12	-	1074	7	FSM	ENSG00000089009.16	ENST00000424576.6	1074	7	0	0	0	0	multi-exon	FALSE	canonical	3	1596	junction_6	3326.90291412298	10234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGACTACATTTTGTG	5	True	NA	-31	True	NA	NA	NA	112409596	112405202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409410
transcript_3577.known	chr1	-	693	4	FSM	ENSG00000116560.11	ENST00000485365.1	693	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	218.493834136242	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	9914	False	NA	-16	True	AATAAA	-17	NA	35181606	35176379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35181134
transcript_35773.known	chr12	-	921	7	FSM	ENSG00000089009.16	ENST00000202773.14	921	7	0	0	0	0	multi-exon	FALSE	canonical	3	6502	junction_6	1562.22177967435	140341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTCTTTTTTTAAT	-4	True	NA	-17	True	ATTAAA	-14	NA	112409605	112405188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
transcript_35774.known	chr12	-	899	2	FSM	ENSG00000089009.16	ENST00000553205.1	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	10277	junction_1	0	3190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTCTTTTTTTAA	3257	False	NA	-18	True	ATTAAA	-13	NA	112406344	112405189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112406038_112406293
transcript_35775.known	chr12	-	1014	4	FSM	ENSG00000089009.16	ENST00000550566.6	1014	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	4801.71124588817	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGAGTACCTGTGCTTGG	27	True	NA	NA	False	NA	NA	NA	112409574	112406746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112406891_112408239_112408339_112408419_112408657_112409040
transcript_35776.known	chr12	+	998	2	FSM	ENSG00000111331.14	ENST00000551007.1	998	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCCTCTGTGTCCTCATC	47	False	NA	NA	False	GATAAA	-3	NA	112938443	112942303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112938708_112941569
transcript_3578.known	chr1	-	434	4	FSM	ENSG00000116560.11	ENST00000490668.5	434	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	206.573634974715	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	9601	False	NA	-16	True	AATAAA	-17	NA	35181344	35176379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176475_35177318_35177400_35177988_35178037_35181134
transcript_35780.nnic	chr12	+	789	2	Antisense	novelGene_ENSG00000111344.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACGAGTGAATGAATGCT	8638	False	NA	NA	False	AATAAA	-16	NA	113103966	113105303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_113104418_113104965
transcript_35782.known	chr12	-	4377	20	FSM	ENSG00000123064.13	ENST00000306014.10	4377	20	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	75.2200833675971	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAGGGTGAACTTAC	-7	True	NA	-1	True	AATAAA	-26	NA	113185478	113157172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_35783.known	chr12	-	4380	20	FSM	ENSG00000123064.13	ENST00000314045.11	4380	20	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	77.4222870129512	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAGGGTGAACTTA	-8	True	NA	-2	True	AATAAA	-25	NA	113185479	113157173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113159113_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_35789.known	chr12	+	1858	4	FSM	ENSG00000139405.16	ENST00000548278.2	1858	4	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	17.6131264181639	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCACTTTTTTTCCC	2	True	NA	22	True	AATAGA	-18	NA	113185720	113192368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113186022_113186184_113186317_113186682_113187049_113191309
transcript_3579.known	chr1	-	1431	3	FSM	ENSG00000116560.11	ENST00000466213.5	1431	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	202	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	5296	False	NA	-16	True	AATAAA	-17	NA	35179246	35176379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176472_35177318_35177400_35177988
transcript_35791.known	chr12	+	369	1	FSM	ENSG00000139405.16	ENST00000615042.1	369	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGTGAACTCCCTATC	500	False	NA	7	True	AATAAA	-18	NA	113186935	113187304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113186900_113187300
transcript_35794.known	chr12	-	1670	5	FSM	ENSG00000166578.10	ENST00000416617.3	1670	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.34477204006491	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAACGCTCTACGA	1	True	NA	-8	True	AATAAA	-23	NA	113221094	113195445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113195890_113197540_113197613_113200579_113200814_113207437_113208260_113220996
transcript_35799.nnic	chr12	-	885	4	NIC	ENSG00000166578.10	novel	1670	5	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	3.85861230093008	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAACGCTCTACGA	NA	False	NA	-8	True	AATAAA	-23	NA	113221131	113195445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_113195890_113197540_113197613_113200579_113200814_113220996
transcript_3580.known	chr1	-	2835	3	FSM	ENSG00000116560.11	ENST00000468598.5	2835	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	126.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	8702	False	NA	-14	True	AATAAA	-19	NA	35180645	35176377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176475_35177318_35177400_35177988
transcript_35802.nnic	chr12	-	1441	4	NIC	ENSG00000166578.10	novel	1670	5	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.23609564462324	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAACGCTCTACGA	-4	True	NA	-8	True	AATAAA	-23	NA	113221099	113195445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_113195890_113197540_113197613_113207437_113208260_113220996
transcript_35808.known	chr12	-	1369	3	FSM	ENSG00000166578.10	ENST00000299732.6	1369	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACGCTCTACGAATAAA	1	True	NA	-3	True	AATAAA	-28	NA	113221094	113195440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113195890_113207437_113208260_113220996
transcript_3581.known	chr1	-	874	9	FSM	ENSG00000116560.11	ENST00000470472.5	874	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	776.905952722078	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	2570	False	NA	-14	True	AATAAA	-19	NA	35190574	35176377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176475_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497
transcript_35813.nnic	chr12	-	824	3	NNC	ENSG00000166578.10	novel	1369	3	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAGGGAACGCTCTAC	-4	True	NA	-10	True	AATAAA	-21	NA	113221099	113195447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_113195890_113207980_113208260_113220996
transcript_35814.known	chr12	-	1872	3	FSM	ENSG00000166578.10	ENST00000546692.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGCTCATGCCTGT	16	True	NA	NA	False	AATAAA	-17	NA	113221027	113200044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113200814_113207437_113208510_113220996
transcript_35816.known	chr12	+	4787	12	FSM	ENSG00000151176.8	ENST00000280800.5	4787	12	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_10	12.5052055276695	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTTTTATCTTATTT	16	True	NA	17	True	AATAAA	-31	NA	113358586	113391629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113358891_113369115_113369210_113372648_113372808_113374473_113374575_113374792_113375008_113380744_113380843_113384104_113384266_113384850_113384947_113385211_113385284_113386936_113387090_113387743_113387907_113388458
transcript_35818.known	chr12	-	3510	16	FSM	ENSG00000089060.12	ENST00000680972.1	3510	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	19.5907007418202	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAGAGAAAATGACACCC	14	True	NA	-16	True	AATAAA	-20	NA	113335109	113298770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113299975_113304320_113304386_113306494_113306576_113307690_113307845_113310233_113310356_113315334_113315477_113316525_113316657_113316941_113317002_113318963_113319072_113320330_113320499_113320580_113320687_113320849_113320908_113321055_113321109_113321195_113321349_113332722_113332961_113334442
transcript_3582.known	chr1	-	464	6	FSM	ENSG00000116560.11	ENST00000460428.5	464	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	868.822559559776	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	5102	False	NA	-14	True	AATAAA	-19	NA	35188042	35176377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972
transcript_35820.known	chr12	-	1605	8	FSM	ENSG00000135094.11	ENST00000257549.9	1605	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.349927106111883	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGTGCATTTTCCCAT	-3	True	NA	NA	False	AATAAA	-19	NA	113403887	113392444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113393150_113393891_113394017_113397164_113397393_113398514_113398607_113398706_113398847_113399111_113399152_113399555_113399711_113403767
transcript_35821.known	chr12	+	1306	8	FSM	ENSG00000139410.15	ENST00000403593.9	1306	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	3.45820526768863	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAATGCTATGGATC	-13	True	NA	18	True	AATAAA	-16	NA	113422379	113438276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113422478_113427961_113428157_113428419_113428460_113429159_113429300_113434133_113434223_113435328_113435557_113436750_113436876_113437885
transcript_35829.nnic	chr12	+	941	5	NIC	ENSG00000139410.15	novel	1306	8	NA	NA	-10	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	8.30662386291807	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAATGCTATGGATC	-23	True	NA	18	True	AATAAA	-16	NA	113422369	113438276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_113422478_113434133_113434223_113435328_113435557_113436750_113436876_113437885
transcript_3583.known	chr1	-	3740	10	FSM	ENSG00000116560.11	ENST00000357214.6	3740	10	0	0	0	0	multi-exon	FALSE	canonical	3	1764	junction_8	159.424040506311	2670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGTTGTCAGTTAA	-1	True	NA	-7	True	CATAAA	-14	NA	35193145	35182935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_35831.nnic	chr12	+	832	4	NIC	ENSG00000139410.15	novel	1306	8	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	7.03957069398096	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAATGCTATGGATC	-3	True	NA	18	True	AATAAA	-16	NA	113422389	113438276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_113422478_113435328_113435557_113436750_113436876_113437885
transcript_35838.known	chr12	+	522	2	FSM	ENSG00000257935.3	ENST00000551357.3	545	2	11	12	0	-3	multi-exon	FALSE	canonical	2	16	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACGAATCTGCCCT	-10	True	NA	NA	False	AATAAA	-40	NA	113472002	113480624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113472083_113480182
transcript_35840.known	chr12	-	832	3	FSM	ENSG00000249550.8	ENST00000662051.1	832	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGGCTGTCTGTGCCGG	-5	True	NA	NA	False	AATAAA	-15	NA	113773686	113757116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113757743_113767074_113767209_113773614
transcript_35842.known	chr12	-	626	3	FSM	ENSG00000249550.8	ENST00000661033.2	627	3	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTGCCTCTTCCTAGC	NA	False	NA	NA	False	AATAAA	-14	NA	113773724	113735840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113736223_113767074_113767209_113773614
transcript_35843.known	chr12	-	3402	3	FSM	ENSG00000249550.8	ENST00000655514.1	3402	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTCCACAAGATTCAGA	NA	False	NA	NA	False	AATAAA	-9	NA	113773726	113743439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113746596_113767074_113767209_113773614
transcript_35845.known	chr12	-	435	3	FSM	ENSG00000249550.8	ENST00000657279.1	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTTGTAGCAATTTAT	-5	True	NA	NA	False	AATAAA	-20	NA	113773686	113750497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113750727_113767074_113767209_113773614
transcript_35846.nnic	chr12	-	1909	2	NNC	ENSG00000249550.8	novel	2059	4	NA	NA	165600	24	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGGACTCGGCCTGAA	NA	False	NA	0	True	AATAAA	-16	NA	113591965	113583861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_113585633_113591827
transcript_35847.nnic	chr12	-	839	2	NNC	ENSG00000249550.8	novel	2059	4	NA	NA	165600	-1046	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTAAATTAACTGGG	NA	False	NA	NA	False	NA	NA	NA	113591965	113584931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_113585633_113591827
transcript_3585.known	chr1	+	7366	30	FSM	ENSG00000146463.12	ENST00000314607.11	7366	30	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_1	57.9260055288464	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAAATTTTTTTTATG	6	True	NA	NA	False	AGTAAA	-27	NA	35268708	35422058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35269086_35325359_35325406_35358924_35359447_35361193_35361256_35361618_35361790_35370028_35370114_35370371_35370628_35381258_35381434_35381545_35381759_35385441_35385593_35386073_35386190_35387002_35387279_35387453_35387605_35388909_35389083_35389947_35390099_35392211_35392353_35392646_35392685_35393594_35393740_35396551_35396671_35397376_35397546_35398412_35398467_35398863_35399044_35399481_35399577_35405022_35405195_35405372_35405469_35408007_35408160_35413971_35414084_35415465_35415715_35418442_35418573_35419469
transcript_35850.known	chr12	-	3574	25	FSM	ENSG00000122965.11	ENST00000392561.7	3574	25	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_1	60.9876894454028	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTTTTCTTCTTCATT	20	False	NA	-1	True	AGTAAA	-25	NA	113966310	113822053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113822647_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_35851.known	chr12	-	4148	24	FSM	ENSG00000122965.11	ENST00000261741.10	4148	24	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_11	27.0585726084508	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTCTTCTTC	5	True	NA	-4	True	AGTAAA	-22	NA	113966325	113822056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_35854.nic	chr12	-	459	3	ISM	ENSG00000122965.11	ENST00000261741.10	4148	24	-22	138002	-22	-2196	5prime_fragment	FALSE	canonical	3	385	junction_1	25.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAAAGGGTCACTCTA	-17	True	NA	NA	False	AAGAAA	-1	NA	113966347	113960058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_113960179_113962231_113962415_113966191
transcript_35857.known	chr12	+	1597	2	FSM	ENSG00000196668.4	ENST00000480237.1	1597	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	116533421	116535521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116533463_116533965
transcript_35858.known	chr12	+	543	2	FSM	ENSG00000196668.4	ENST00000489452.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTCTGTCGGGAAT	43	False	NA	NA	False	NA	NA	NA	116533467	116534359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116533617_116533965
transcript_3586.known	chr1	+	466	4	FSM	ENSG00000146463.12	ENST00000441447.1	466	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	107.619700798692	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAATAAGTTAAAAAAAGA	4	True	NA	NA	False	AATACA	-5	NA	35269032	35359229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35269086_35295926_35295989_35325359_35325406_35358924
transcript_35862.known	chr12	+	435	3	FSM	ENSG00000196668.4	ENST00000470091.1	435	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGCTTTGTGATC	10	True	NA	2	True	AATAAA	-19	NA	116533434	116536513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116533617_116536119_116536212_116536352
transcript_35863.known	chr12	+	5727	11	FSM	ENSG00000135119.15	ENST00000257575.9	5727	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	8.24378553820998	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTTGTGGTCTTGAT	-5	True	NA	19	True	AATAAA	-19	NA	116738314	116853631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116833791_116833942_116835959_116836026_116836180_116836283_116849313
transcript_3587.known	chr1	-	4777	21	FSM	ENSG00000142687.18	ENST00000325722.8	4777	21	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_20	25.4261676231397	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTGCTGGGTGTG	-9	True	NA	-7	True	ATTAAA	-18	NA	35557403	35433491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557206
transcript_35872.known	chr12	+	1389	4	FSM	ENSG00000135119.15	ENST00000677328.1	1389	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.739839372653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGTATGAATTTGCT	9	True	NA	9	True	AATAAA	-18	NA	116759934	116810520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116760622_116766813_116766915_116779194_116779349_116810073
transcript_35874.known	chr12	+	415	2	FSM	ENSG00000135119.15	ENST00000615278.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCATCCCGCGTGCAAAA	1721	False	NA	NA	False	ATTAAA	-19	NA	116738177	116738694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116738371_116738472
transcript_35876.known	chr12	-	5789	2	FSM	ENSG00000135116.9	ENST00000257572.5	5789	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGACATTTGTGTTTT	-2	True	NA	-3	True	ATTAAA	-21	NA	116881441	116856143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_116861467_116880975
transcript_35878.known	chr12	+	690	1	FSM	ENSG00000277840.1	ENST00000614934.1	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACTTTGTGTGTTCATTT	NA	False	NA	NA	False	NA	NA	NA	117002462	117003152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_117002500_117003200
transcript_35879.known	chr12	-	1057	8	FSM	ENSG00000088992.18	ENST00000470612.5	1057	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_3	35.4711725438088	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGTCAGTTCCT	NA	False	NA	2	True	AATAAA	-26	NA	117099479	117038922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046771_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
transcript_35880.nic	chr12	-	722	6	NIC	ENSG00000088992.18	novel	936	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	47.8522726733015	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGCCTCTGTCAGTTC	4557	False	NA	0	True	AATAAA	-24	NA	117054006	117038924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_117039211_117041946_117041995_117046558_117046667_117046776_117046839_117049018_117049159_117053928
transcript_35883.known	chr12	-	5976	12	FSM	ENSG00000135108.16	ENST00000622495.5	5976	12	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_3	61.7641475077198	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGCTCAAACACCATAG	5	True	NA	-16	True	AATAAA	-17	NA	117190470	117141990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_35884.known	chr12	-	2906	12	FSM	ENSG00000135108.16	ENST00000330622.9	2906	12	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	110.461690752799	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTGAAGGGAAAAAAAG	19	True	NA	45	True	AATGAA	-20	NA	117190456	117145067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158085_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_35892.known	chr12	-	4138	13	NNC	ENSG00000135108.16	novel	5976	12	NA	NA	-1	1268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	152.835128124685	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAAATGGCCTGCCCAAT	4	True	NA	-24	True	AATAAA	-22	NA	117190471	117143780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217_117190278_117190326
transcript_35893.known	chr12	-	519	4	FSM	ENSG00000135108.16	ENST00000551458.1	519	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	277.196681076812	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCATAGCTTTAGCAG	5	True	NA	NA	False	NA	NA	NA	117190470	117186476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117186572_117188758_117188794_117189226_117189363_117190217
transcript_35909.known	chr12	+	2449	12	FSM	ENSG00000111445.14	ENST00000392542.6	2449	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	129.869864934795	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	-16	True	NA	14	True	AATAAA	-24	NA	118016721	118032234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118016893_118017689_118018054_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_35912.known	chr12	+	2104	11	FSM	ENSG00000111445.14	ENST00000454402.7	2104	11	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_5	40.1254283466233	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	-35	True	NA	14	True	AATAAA	-24	NA	118016702	118032234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_35928.known	chr12	-	2855	9	FSM	ENSG00000176871.9	ENST00000315436.8	2855	9	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	46.6072352215834	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTGTGGTGCTGGTGTG	5	True	NA	NA	False	AATAAA	-21	NA	118061179	118032686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309_118052479_118061035
transcript_3593.known	chr1	-	3213	21	FSM	ENSG00000142687.18	ENST00000426982.6	3213	21	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_20	50.7079875364819	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAATGGCTCTGTACCC	5	True	NA	NA	False	NA	NA	NA	35557655	35434964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557549
transcript_35933.known	chr12	-	935	7	FSM	ENSG00000176871.9	ENST00000543218.5	935	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	136.464179264092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAAATCGTCCTGTCAAA	-2	True	NA	21	True	NA	NA	NA	118061114	118034164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118052309_118052479_118061035
transcript_35934.known	chr12	-	1008	4	FSM	ENSG00000176871.9	ENST00000536602.5	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	43.2049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTTCTCATCGGCACT	0	True	NA	NA	False	NA	NA	NA	118061112	118042455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118042973_118043132_118043378_118052309_118052479_118061035
transcript_35935.known	chr12	-	687	1	FSM	ENSG00000176871.9	ENST00000614776.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCTTTTTCCTTT	1960	False	NA	1	True	NA	NA	NA	118036384	118035697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118035700_118036400
transcript_35944.known	chr12	-	694	4	FSM	ENSG00000176834.14	ENST00000539956.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.02768199119819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGAGTCTCGCACTGT	2020	False	NA	NA	False	NA	NA	NA	118136026	118117666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118117883_118121500_118121619_118126480_118126671_118135856
transcript_35946.nnic	chr12	-	1140	3	NIC	ENSG00000176834.14	novel	694	4	NA	NA	29	-28	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATAAAGTATTGCT	-3	True	NA	NA	False	AAAAAG	-8	NA	118135997	118117073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_118117883_118126480_118126671_118135856
transcript_35948.known	chr12	-	418	1	FSM	ENSG00000176834.14	ENST00000621133.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCCAGGTGCATTGGC	NA	False	NA	NA	False	CATAAA	-17	NA	118117463	118117045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118117000_118117500
transcript_35954.known	chr12	+	1431	4	FSM	ENSG00000089220.5	ENST00000261313.3	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	5779	junction_2	216.953143942803	52614	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTCCCCGGATGT	-2	True	NA	15	True	AATAAA	-19	NA	118136123	118145584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118136345_118138038_118138149_118139450_118139552_118144585
transcript_35956.known	chr12	-	4346	21	FSM	ENSG00000135090.14	ENST00000392533.8	4346	21	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	7.30941174103635	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCTTGCTGTGTTATTGT	4	True	NA	-4	True	AATAAA	-14	NA	118372907	118149800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806_118189942_118199050_118199258_118201295_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_35961.nic	chr12	-	1403	12	ISM	ENSG00000135090.14	ENST00000392533.8	4346	21	-19	51551	-19	70	5prime_fragment	FALSE	canonical	3	45	junction_5	7.8213524226318	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCCAAGAGACACGG	-15	True	NA	NA	False	AATGAA	-6	NA	118372926	118201351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_35962.known	chr12	-	2147	8	FSM	ENSG00000135090.14	ENST00000537952.1	2147	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	5.12297745058317	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAGAAAAAAATTCAG	10	True	NA	NA	False	ATTAAA	-34	NA	118190545	118150956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806
transcript_35969.known	chr12	+	879	1	FSM	ENSG00000240342.3	ENST00000488803.1	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1099	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGTTTTTATACAAGAAA	24	False	NA	NA	False	NA	NA	NA	118246083	118246962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118246100_118247000
transcript_3597.nnic	chr1	-	1691	3	NNC	ENSG00000142687.18	novel	4777	21	NA	NA	11	8398	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCTTCTGATCATCTT	16	False	NA	-1	True	AATAAA	-15	NA	35557644	35524697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_35526124_35554349_35554520_35557549
transcript_35970.known	chr12	+	4724	12	FSM	ENSG00000111707.12	ENST00000543473.2	4724	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	267.632411038007	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTCATTTGGTGCATG	3	True	NA	6	True	AATAAA	-15	NA	118376554	118418033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113_118386186_118389926_118389947_118391125_118391283_118400658_118400755_118401758_118401821_118401982_118402005_118403411_118403518_118411072_118411158_118414334
transcript_35971.nnic	chr12	-	634	3	NNC	ENSG00000255618.2	novel	530	3	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	NA	False	NA	0	True	AATAAA	-22	NA	118774452	118773030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_118773303_118773610_118773776_118774255
transcript_35972.nnic	chr12	-	588	3	NNC	ENSG00000255618.2	novel	530	3	NA	NA	124	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	NA	False	NA	0	True	AATAAA	-22	NA	118774454	118773030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_118773303_118773610_118773776_118774303
transcript_35973.known	chr12	-	530	3	FSM	ENSG00000255618.2	ENST00000668907.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	2	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	NA	False	NA	0	True	AATAAA	-22	NA	118774578	118773030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118773303_118773610_118773776_118774485
transcript_3598.known	chr1	-	2171	13	FSM	ENSG00000142687.18	ENST00000440579.5	2171	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	68.1702831151522	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGTACCTCTCTGCC	2673	False	NA	-4	True	NA	NA	NA	35554987	35451634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35554899
transcript_35986.known	chr12	+	8431	13	FSM	ENSG00000139767.10	ENST00000267260.5	8431	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.68325082306035	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCTCAGTGTTCTCT	1	True	NA	17	True	ATTAAA	-24	NA	118981540	119163051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118982014_119102235_119102383_119114277_119114365_119116936_119117009_119120249_119120277_119122069_119122121_119125380_119125480_119130677_119130835_119145380_119145686_119151016_119151221_119153538_119153650_119154242_119154384_119156494
transcript_35987.known	chr12	+	1861	3	FSM	ENSG00000152137.8	ENST00000281938.7	1861	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	6	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTGGTTCTTTTAA	1	True	NA	18	True	AATAAA	-17	NA	119178930	119194746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119179680_119187024_119187089_119193698
transcript_35990.known	chr12	+	886	3	FSM	ENSG00000183273.7	ENST00000536742.5	886	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGACTTTTCCATCC	4	True	NA	7	True	ATTAAA	-23	NA	119334711	119433636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119335267_119428682_119428763_119433385
transcript_35991.known	chr12	-	495	3	FSM	ENSG00000248636.7	ENST00000535511.5	495	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGGGATCTTCTTTTA	721	False	NA	NA	False	AATAAA	-15	NA	119594240	119387990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_119388329_119553547_119553646_119594181
transcript_35993.nnic	chr12	+	1103	2	Antisense	novelGene_ENSG00000248636.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAAATCCTATGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	119363687	119365450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_119363843_119364502
transcript_35995.known	chr12	+	2303	8	FSM	ENSG00000111725.11	ENST00000541640.5	2303	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	92.2463427735866	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCCTGGAGGAGCTCT	-12	True	NA	20	True	AATAAA	-21	NA	119667863	119681624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119668046_119668235_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_35997.known	chr12	+	2219	7	FSM	ENSG00000111725.11	ENST00000229328.10	2219	7	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	27.1149815087937	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	-6	True	NA	15	True	AATAAA	-16	NA	119668132	119681619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_36.known	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	483	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00079_+_0_600
transcript_3600.known	chr1	+	3433	8	FSM	ENSG00000020129.16	ENST00000356090.8	3433	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	20.3499987464273	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	-23	True	NA	20	True	AATAAA	-20	NA	35557791	35566779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35557884_35558155_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_36002.nic	chr12	-	1094	7	ISM	ENSG00000122966.17	ENST00000612548.4	1799	13	-35	144758	-3	-50362	5prime_fragment	FALSE	canonical	3	45	junction_5	7.06320670013903	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTCTCTCTTCATTT	-3	True	NA	NA	False	AATAAA	-13	NA	119877323	119832517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_119832865_119834085_119834229_119850173_119850276_119857522_119857699_119869059_119869202_119876072_119876182_119877248
transcript_36006.known	chr12	+	331	1	FSM	ENSG00000226729.3	ENST00000484185.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAACTAATGAAAACTAAAT	NA	False	NA	NA	False	NA	NA	NA	119959423	119959754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119959400_119959800
transcript_36008.known	chr12	-	2855	6	FSM	ENSG00000111737.12	ENST00000229340.10	2855	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	1.74355957741627	1117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCCAGGGTCTGTTT	2	True	NA	-9	True	AATAAA	-17	NA	120116753	120095098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120116598
transcript_36010.known	chr12	+	2094	1	FSM	ENSG00000277283.1	ENST00000611079.1	2094	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGACTTTGCCTGCATGT	-12	True	NA	14	True	AATAAA	-26	NA	120116906	120119000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120116900_120119000
transcript_36012.nic	chr12	-	1979	14	ISM	ENSG00000089154.11	ENST00000300648.7	8681	58	-6	45862	-6	2726	5prime_fragment	FALSE	canonical	3	219	junction_13	28.8039691544977	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACTGGTTTAAAAA	-5	True	NA	NA	False	NA	NA	NA	120194721	120173063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_36017.known	chr12	-	8681	58	FSM	ENSG00000089154.11	ENST00000300648.7	8681	58	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_43	100.435343546495	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTACCTGTTTTTGTA	1	True	NA	16	True	ATTAAA	-32	NA	120194715	120127201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120127975_120129275_120129495_120130645_120130754_120131184_120131334_120131925_120132023_120134290_120134406_120134532_120134727_120136501_120136733_120137205_120137320_120137544_120137815_120137900_120138045_120138322_120138416_120138694_120138857_120140858_120141024_120142506_120142723_120142823_120142942_120144305_120144449_120144638_120144836_120144922_120145062_120145261_120145331_120147051_120147273_120148166_120148347_120149605_120149721_120149921_120150044_120151144_120151392_120153212_120153408_120153743_120153910_120154969_120155041_120155240_120155431_120155591_120155720_120156460_120156605_120156911_120156993_120157848_120158031_120158459_120158616_120159824_120160024_120160141_120160256_120161489_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_3602.nnic	chr1	-	836	3	NNC	ENSG00000239636.2	novel	902	3	NA	NA	-41	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGGATGGTGTTATGAA	NA	False	NA	NA	False	ATTAAA	-21	NA	35577812	35569810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_35569920_35574462_35574699_35577321
transcript_3603.known	chr1	-	852	3	FSM	ENSG00000239636.2	ENST00000444348.2	902	3	42	8	42	-2	multi-exon	FALSE	canonical	2	2	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAATGGATGGTGTTA	32	False	NA	NA	False	ATTAAA	-17	NA	35577729	35569814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35569920_35574359_35574699_35577321
transcript_3611.known	chr1	-	2628	2	FSM	ENSG00000142686.8	ENST00000270815.5	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGAGTATGTGTTT	-10	True	NA	NA	False	AATAAA	-17	NA	35718884	35713876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35716327_35718706
transcript_36114.known	chr12	-	677	1	FSM	ENSG00000089157.16	ENST00000551217.1	677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3440	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	3732	False	NA	-13	True	AATAAA	-22	NA	120197375	120196698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196700_120197400
transcript_36115.known	chr12	-	1257	8	FSM	ENSG00000089157.16	ENST00000228306.8	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_7	6898.106196779	36038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	NA	False	NA	-21	True	AATAAA	-14	NA	120201211	120196706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200892_120201082
transcript_36116.known	chr12	-	993	8	FSM	ENSG00000089157.16	ENST00000546989.5	993	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	7495.46111636494	8358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-3	True	NA	-16	True	AATAAA	-19	NA	120201110	120196701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198632_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_36117.known	chr12	-	912	7	FSM	ENSG00000089157.16	ENST00000313104.9	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_2	7657.29831961349	12952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	0	True	NA	-16	True	AATAAA	-19	NA	120201107	120196701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_36118.known	chr12	-	2591	6	FSM	ENSG00000089157.16	ENST00000552461.5	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	19833	junction_5	648.106596170722	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	-3	True	NA	-21	True	AATAAA	-14	NA	120201110	120196706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309
transcript_36119.known	chr12	-	1344	7	FSM	ENSG00000089157.16	ENST00000551150.5	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	19833	junction_5	712.395411426984	51650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	8	False	NA	-13	True	AATAAA	-22	NA	120201099	120196698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729
transcript_36120.known	chr12	-	1106	8	FSM	ENSG00000089157.16	ENST00000549098.5	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	7355.81593859233	2855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGGACTCTT	-3	True	NA	-22	True	AATAAA	-13	NA	120201110	120196707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200718_120200832_120201082
transcript_36121.known	chr12	-	720	2	FSM	ENSG00000089157.16	ENST00000552292.5	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	21502	junction_1	0	4905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	3299	False	NA	-16	True	AATAAA	-19	NA	120197808	120196701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321
transcript_36122.known	chr12	-	966	8	FSM	ENSG00000089157.16	ENST00000551258.5	966	8	0	0	0	0	multi-exon	FALSE	canonical	3	1338	junction_3	7112.68046433657	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCGGACGAGGATATG	10	False	NA	-128	True	NA	NA	NA	120201097	120196813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198771_120198894_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_36123.known	chr12	-	402	4	FSM	ENSG00000089157.16	ENST00000551914.1	402	4	0	0	0	0	multi-exon	FALSE	canonical	1	126	junction_1	9774.2659514098	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAACACTGGTCTCGG	287	False	NA	NA	False	NA	NA	NA	120200820	120198946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120198994_120199117_120199206_120199309_120199486_120200729
transcript_36124.known	chr12	-	3683	11	FSM	ENSG00000089159.17	ENST00000424649.6	3683	11	0	0	0	0	multi-exon	TRUE	canonical	3	447	junction_5	88.5630284035048	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	NA	False	NA	-14	True	AATAAA	-19	NA	120265771	120210446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_36130.known	chr12	+	1170	5	FSM	ENSG00000255857.7	ENST00000535200.2	1199	5	29	0	-1	0	multi-exon	FALSE	canonical	3	19	junction_4	68.1432315054107	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGGGAGGCGGATC	18	True	NA	NA	False	NA	NA	NA	120201370	120213138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929_120211107_120212374
transcript_36132.known	chr12	+	707	4	FSM	ENSG00000255857.7	ENST00000542314.6	780	4	36	37	2	-37	multi-exon	FALSE	canonical	3	16	junction_3	68.762069647606	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAAAAATAAAATCAAA	0	True	NA	-29	True	CATAAA	-42	NA	120201326	120210519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210085
transcript_36135.known	chr12	+	2525	4	FSM	ENSG00000255857.7	ENST00000667017.1	2525	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	61.2989033797143	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTACTGAAAATACAAAAAA	3	True	NA	NA	False	NA	NA	NA	120201355	120213210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929
transcript_36138.known	chr12	+	1166	4	FSM	ENSG00000255857.7	ENST00000542265.7	1183	4	17	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	16.0069429380573	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCATGGGGGCGTG	206	False	NA	NA	False	AATACA	-7	NA	120201290	120213231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120212374
transcript_36139.known	chr12	+	716	4	FSM	ENSG00000255857.7	ENST00000667721.2	748	4	26	6	-6	-4	multi-exon	FALSE	canonical	1	3	junction_2	72.2511053356433	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGGGGGTCTCACTA	13	True	NA	10	True	AATAAA	-10	NA	120201365	120212765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206713_120209838_120209935_120212374
transcript_36143.known	chr12	+	443	1	FSM	ENSG00000255857.7	ENST00000620336.1	443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGGGTCTCACTATATT	514	False	NA	14	True	AATAAA	-14	NA	120212326	120212769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120212300_120212800
transcript_36144.known	chr12	-	3785	12	FSM	ENSG00000089159.17	ENST00000228307.11	3785	12	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	230.274575594635	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	NA	False	NA	-14	True	AATAAA	-19	NA	120265771	120210446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120215559_120215662_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_36145.nic	chr12	+	1207	4	NIC	ENSG00000089163.4	novel	1217	4	NA	NA	-23	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	5.90668171555645	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAATGCTTCATGAAT	8589	False	NA	13	True	AATAAA	-16	NA	120302292	120313241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_120302379_120303590_120304059_120312455_120312751_120312883
transcript_36147.nnic	chr12	+	944	4	NNC	ENSG00000089163.4	novel	1217	4	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.31816613336672	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAATGCTTCATGAAT	8609	False	NA	13	True	AATAAA	-16	NA	120302312	120313241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_120302379_120303560_120303786_120312455_120312751_120312883
transcript_36149.known	chr12	+	1217	4	FSM	ENSG00000089163.4	ENST00000202967.4	1217	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	0.816496580927726	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATGAATTTGTGTGT	8617	False	NA	21	True	AATAAA	-24	NA	120302320	120313249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120302379_120303560_120304059_120312455_120312751_120312883
transcript_36156.nic	chr12	+	1157	2	ISM	ENSG00000089163.4	ENST00000202967.4	1217	4	-8	8598	-3	593	5prime_fragment	FALSE	canonical	3	16	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTGAGGATG	8609	False	NA	NA	False	AAAAAG	-9	NA	120302312	120304651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_120302379_120303560
transcript_3616.known	chr1	-	4769	25	FSM	ENSG00000092853.14	ENST00000251195.9	4769	25	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	33.5939809423586	916	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTGTTTTTGCATAT	11	True	NA	NA	False	CATAAA	-14	NA	35769967	35720217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35720981_35736913_35737076_35737338_35737422_35737991_35738098_35738454_35738583_35739135_35739258_35739364_35739530_35743140_35743242_35743454_35743531_35745450_35745563_35746765_35746993_35747906_35748062_35748404_35748605_35749466_35749532_35749632_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_36160.known	chr12	-	1152	4	FSM	ENSG00000111786.9	ENST00000229390.8	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	3982	junction_2	243.798186120315	4438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-42	True	NA	-5	True	AATATA	-18	NA	120469748	120461671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120462163_120463949_120464123_120465626_120465788_120469421
transcript_36164.known	chr12	-	1153	2	FSM	ENSG00000170855.4	ENST00000302432.3	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTTGGAATAGCTGTG	1079	False	NA	NA	False	NA	NA	NA	120446370	120444207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120444956_120445965
transcript_36165.known	chr12	+	767	1	FSM	ENSG00000111775.3	ENST00000549525.1	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	592	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGCTGAGAGTTACTTT	1154	False	NA	34	True	AATAAA	-21	NA	120439970	120440737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120440000_120440700
transcript_36166.known	chr12	+	537	3	FSM	ENSG00000111775.3	ENST00000229379.3	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	8025	junction_2	410	16807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTCATGAGCTGAGAG	-3	True	NA	27	True	AATAAA	-14	NA	120438112	120440730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120438230_120438378_120438522_120440453
transcript_36167.known	chr12	-	1151	2	FSM	ENSG00000170855.4	ENST00000546954.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	0	5436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCCTCTGGAACTCA	9	True	NA	-16	True	AATAAA	-23	NA	120446384	120443963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120444956_120446225
transcript_36168.known	chr12	+	931	5	FSM	ENSG00000257218.6	ENST00000548171.1	931	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	117.77812827516	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTTAGTTGCCAT	-8	True	NA	NA	False	NA	NA	NA	120446443	120460344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120446562_120446656_120446830_120454932_120455031_120457075_120457180_120459906
transcript_36169.known	chr12	+	4238	4	FSM	ENSG00000257218.6	ENST00000551765.6	4238	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	22.573337271116	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCATGAATGCATACTT	-8	True	NA	NA	False	AATAAA	-18	NA	120446443	120463749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120446562_120446656_120446830_120457075_120457180_120459906
transcript_3617.known	chr1	+	1035	6	FSM	ENSG00000126070.20	ENST00000397828.3	1035	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	23.7368911190998	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAGGAGAAAAAACTAAT	-31	True	NA	NA	False	NA	NA	NA	35931081	35982652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_35982620
transcript_36170.known	chr12	-	327	3	FSM	ENSG00000111786.9	ENST00000550458.1	327	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	2089.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGACACCAAATTCCGCT	5184	False	NA	NA	False	NA	NA	NA	120469571	120463977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120464123_120465755_120465788_120469421
transcript_36172.known	chr12	+	662	5	FSM	ENSG00000088986.11	ENST00000548342.5	662	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1348.1185036932	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCATCCAAAAACAAGGA	26	True	NA	NA	False	NA	NA	NA	120469882	120498237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120470105_120488116_120488178_120488577_120488654_120496415_120496554_120498072
transcript_36181.known	chr12	+	814	3	FSM	ENSG00000088986.11	ENST00000392509.6	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	1533	1993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	-7	True	NA	13	True	AATAAA	-16	NA	120469849	120498493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120470105_120496415_120496554_120498072
transcript_36187.known	chr12	-	1214	2	FSM	ENSG00000248008.4	ENST00000668253.2	1218	2	0	4	0	-4	multi-exon	FALSE	canonical	3	59	junction_1	0	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCTCAGGTTCCTCAT	-39	True	NA	-3	True	ATTAAA	-18	NA	120495946	120491020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120492111_120495822
transcript_36188.known	chr12	+	663	3	FSM	ENSG00000088986.11	ENST00000242577.11	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	3122	junction_2	20.5	31626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	1	True	NA	13	True	AATAAA	-16	NA	120496112	120498493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120496217_120496415_120496554_120498072
transcript_36189.known	chr12	+	719	2	FSM	ENSG00000088986.11	ENST00000549989.1	719	2	0	0	0	0	multi-exon	FALSE	canonical	3	3122	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCTGTACTAGTTTG	1	True	NA	-20	True	NA	NA	NA	120496112	120498350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120496554_120498072
transcript_36190.known	chr12	+	595	3	FSM	ENSG00000088986.11	ENST00000552870.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1581.5	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATCTGATGCAGATGT	1	True	NA	-8	True	TTTAAA	-2	NA	120496112	120498472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120496217_120496415_120496554_120498119
transcript_36196.known	chr12	-	701	2	FSM	ENSG00000110871.15	ENST00000547448.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAAAAATTAGCCGGG	5	True	NA	NA	False	ACTAAA	-2	NA	120529154	120526892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120527379_120528939
transcript_36197.known	chr12	-	1506	7	FSM	ENSG00000110871.15	ENST00000288532.11	1506	7	0	0	0	0	multi-exon	TRUE	canonical	3	345	junction_3	17.4451521441727	1982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	1	True	NA	-4	True	AGTAAA	-17	NA	120529158	120503278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
transcript_3620.known	chr1	+	548	3	FSM	ENSG00000126070.20	ENST00000491443.2	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	7.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGGTGTCTCGAAGTA	NA	False	NA	4	True	CATAAA	-18	NA	35966954	35973592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35967076_35972023_35972233_35973374
transcript_36200.known	chr12	-	578	1	FSM	ENSG00000167272.11	ENST00000542568.1	578	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	1760	False	NA	-52	True	AATAAA	-18	NA	120579625	120579047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120579000_120579600
transcript_36201.known	chr12	-	821	4	FSM	ENSG00000167272.11	ENST00000542776.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_3	130.099961568019	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	49	False	NA	-52	True	AATAAA	-18	NA	120581336	120579047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114
transcript_36202.known	chr12	+	1857	6	FSM	ENSG00000157782.10	ENST00000453000.1	1857	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	14.6205335059977	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGCCGTGATGGTCTTTC	4771	False	NA	16	True	AATAAA	-18	NA	120655298	120667324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120656273_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
transcript_36203.known	chr12	-	496	2	FSM	ENSG00000256008.3	ENST00000544339.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGAGACCACAATC	100	False	NA	NA	False	ATTAAA	-25	NA	120640153	120630104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120630497_120640049
transcript_36204.known	chr12	-	1015	2	FSM	ENSG00000256008.3	ENST00000540369.2	1015	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCCTGAACTTTCTTG	NA	False	NA	1	True	AATAAA	-23	NA	120641591	120629610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120630497_120641462
transcript_36205.nnic	chr12	-	1277	2	NNC	ENSG00000256008.3	novel	2134	2	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGAGTTTTGCCTGAAC	NA	False	NA	-6	True	AATAAA	-16	NA	120640515	120629617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_120630497_120640117
transcript_36207.known	chr12	+	6341	5	FSM	ENSG00000110917.8	ENST00000228506.8	6341	5	0	0	0	0	multi-exon	FALSE	canonical	3	1371	junction_4	43.6369969177532	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTTGGGACTGAGTT	-3	True	NA	47	True	AATAAA	-16	NA	120687148	120701859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120687532_120694090_120694270_120694823_120695001_120695094_120695153_120696315
transcript_3621.known	chr1	+	1490	10	FSM	ENSG00000092850.12	ENST00000207457.8	1490	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.69623074369749	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	-6	True	NA	2	True	AATAAA	-15	NA	36084093	36088275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36084150_36084869_36085078_36085162_36085289_36085835_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
transcript_36210.known	chr12	+	841	3	FSM	ENSG00000110917.8	ENST00000412616.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	732	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCGAGTAGAGAGCAGCC	93	False	NA	32	True	ATTAAA	-17	NA	120687244	120696690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120687532_120694090_120694270_120696315
transcript_36211.known	chr12	+	1859	10	FSM	ENSG00000122971.9	ENST00000242592.9	1859	10	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_5	10.6458129484475	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	-14	True	NA	16	True	AATAAA	-16	NA	120725825	120740008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120725932_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_36214.known	chr12	-	1339	7	FSM	ENSG00000157895.11	ENST00000546272.5	1339	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	61.7485942260137	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAAAGGAACCTTCCAG	3	True	NA	NA	False	NA	NA	NA	121016487	121003875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121004493_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121012429_121012687_121016329
transcript_3622.known	chr1	+	1651	6	FSM	ENSG00000116863.11	ENST00000373178.5	1651	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	27.9971427113554	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	-2	True	NA	13	True	AATAAA	-20	NA	36088891	36093932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36089116_36091243_36091341_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_36223.known	chr12	-	4469	6	FSM	ENSG00000157895.11	ENST00000288757.7	4469	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	32.8548322168901	1632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACTGATGGCAATGGT	3	True	NA	-5	True	AATAAA	-27	NA	121016487	121000485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121004490_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_36224.known	chr12	+	5113	13	FSM	ENSG00000089041.17	ENST00000328963.10	5113	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.493006648591635	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATCTTCATTTCCTTT	-44	True	NA	NA	False	ATTAAA	-18	NA	121132875	121188032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121133096_121154784_121154954_121156078_121156148_121160901_121160975_121162423_121162521_121165356_121165438_121166057_121166188_121167487_121167625_121175387_121175479_121177146_121177213_121177296_121177447_121180353_121180456_121184304
transcript_36227.known	chr12	+	1836	13	FSM	ENSG00000135124.16	ENST00000359949.11	1836	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	33.9913183360431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCGAGGACCAGACATTAA	317	False	NA	-20	True	NA	NA	NA	121210064	121234070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121210299_121216954_121217003_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_36228.known	chr12	+	1084	12	FSM	ENSG00000135124.16	ENST00000542067.5	1084	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.0144590766156	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTACCCCACACCTGG	0	True	NA	NA	False	NA	NA	NA	121210164	121233547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121222963_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_3623.nnic	chr1	+	1530	5	NIC	ENSG00000116863.11	novel	1651	6	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	104.874627532116	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	22	True	NA	13	True	AATAAA	-20	NA	36088915	36093932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_36089116_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_36230.known	chr12	+	1760	12	FSM	ENSG00000135124.16	ENST00000337233.9	1760	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	10.1655714534504	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	9	True	NA	16	True	ATTAAA	-16	NA	121210128	121234106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_36232.known	chr12	+	1612	11	FSM	ENSG00000135124.16	ENST00000543984.5	1612	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	27.4191538892067	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	9	True	NA	16	True	ATTAAA	-16	NA	121210128	121234106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121210299_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_36242.nic	chr12	+	787	6	NIC	ENSG00000135124.16	novel	1760	12	NA	NA	-23	406	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	34.6871734218861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGTGTGTTGTGGCTTT	-26	True	NA	NA	False	NA	NA	NA	121210093	121223449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121223257
transcript_36245.known	chr12	-	2006	16	FSM	ENSG00000110931.19	ENST00000412367.6	2006	16	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	23.6825298948871	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	1119	False	NA	19	True	TTTAAA	-20	NA	121296686	121240524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_36246.known	chr12	-	5304	16	FSM	ENSG00000110931.19	ENST00000337174.7	5304	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	80.9879552087154	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCTGGGCCTCTTGG	NA	False	NA	-22	True	AATAAA	-17	NA	121298057	121237696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121297538
transcript_36247.nnic	chr12	-	1502	15	NIC	ENSG00000110931.19	novel	2006	16	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_14	80.3442846855497	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	15	True	NA	19	True	TTTAAA	-20	NA	121296712	121240524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121296637
transcript_3626.known	chr1	-	1056	5	FSM	ENSG00000054116.12	ENST00000373162.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	190.810115035865	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGCGATATAGTCCAT	-11	True	NA	-27	True	AATAAA	-4	NA	36149497	36137053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149091
transcript_36261.known	chr12	-	2400	17	FSM	ENSG00000089053.13	ENST00000541887.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_8	182.965918530611	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTATTTTGTTGCT	3	True	NA	-24	True	AATAAA	-15	NA	121352388	121308356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328459_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_36263.known	chr12	-	2574	17	FSM	ENSG00000089053.13	ENST00000261819.8	2574	17	0	0	0	0	multi-exon	TRUE	canonical	3	654	junction_8	106.571700482586	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	3	True	NA	88	True	AATAAA	-19	NA	121352411	121308244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_3627.known	chr1	-	951	5	FSM	ENSG00000054116.12	ENST00000373163.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	204.999237803461	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCTCAAACCATTTTAC	4	True	NA	82	True	GGGGCT	-29	NA	36149451	36136944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149259
transcript_36293.known	chr12	-	677	5	FSM	ENSG00000089053.13	ENST00000536416.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	503.76004952755	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAATTTGGCTTTTCTGAC	-3	True	NA	NA	False	AAAAAG	-22	NA	121352417	121345839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121345952_121346035_121346127_121346895_121347006_121347801_121347882_121352133
transcript_36295.known	chr12	-	1141	2	FSM	ENSG00000089053.13	ENST00000422342.2	1141	2	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	NA	False	NA	88	True	AATAAA	-19	NA	121310394	121308244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121308692_121309700
transcript_36299.known	chr12	-	1549	11	FSM	ENSG00000089094.20	ENST00000446152.6	1549	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	86.6784863734941	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTGGGCAGGAGTGGC	11	True	NA	NA	False	NA	NA	NA	121579644	121509571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_36303.nic	chr12	-	1528	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	105.257121984192	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	3060	False	NA	28	True	NA	NA	NA	121579701	121516346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_36304.nic	chr12	-	1671	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	109.282960392271	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	-5	True	NA	28	True	NA	NA	NA	121580252	121516346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
transcript_36307.nic	chr12	-	1143	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-57	-42	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	106.129666789449	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCATCAGCATTTGTT	3060	False	NA	-14	True	AATAAA	-21	NA	121579701	121516388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121516521_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_36314.known	chr12	-	5224	23	FSM	ENSG00000089094.20	ENST00000377069.8	5224	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	100.19006730598	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTAATTTCTGATTCA	3	True	NA	-28	True	AGTAAA	-19	NA	121580459	121429096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121430164_121430341_121430470_121439856_121440076_121440815_121440978_121441069_121441234_121442156_121442837_121442991_121443031_121444011_121444273_121444449_121444537_121445274_121445419_121453119_121453345_121494578_121494666_121509566_121510040_121513275_121513403_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
transcript_36321.known	chr12	-	574	4	FSM	ENSG00000089094.20	ENST00000540191.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	103.701494685467	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTGTATCAGAGGGCG	2621	False	NA	NA	False	NA	NA	NA	121580140	121574364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121574594_121575780_121575860_121578801_121578947_121580019
transcript_36329.known	chr12	+	2051	7	FSM	ENSG00000170633.17	ENST00000392465.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	190.189963516013	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTACATTGTCTTGG	-9	True	NA	15	True	AATAAA	-16	NA	121400118	121424348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_36336.known	chr12	+	2066	6	FSM	ENSG00000170633.17	ENST00000361234.10	1986	6	-77	-3	-42	-1	multi-exon	FALSE	canonical	3	413	junction_1	39.5959593898165	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATTGTCTTGGTCA	NA	False	NA	18	True	AATAAA	-19	NA	121400040	121424351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_3634.known	chr1	-	1114	3	FSM	ENSG00000054116.12	ENST00000616074.4	1114	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	244	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	6437	False	NA	2	True	AATAAA	-28	NA	36149514	36136569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36149336
transcript_36347.known	chr12	+	1449	5	FSM	ENSG00000170633.17	ENST00000613529.4	1449	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	205.387438759044	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACATTGTCTTGGTCAG	-1	True	NA	19	True	AATAAA	-20	NA	121400082	121424352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121417860_121417912_121420241_121420335_121420576_121420779_121423385
transcript_3636.known	chr1	-	221	2	FSM	ENSG00000054116.12	ENST00000469757.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCGGATGAGATTCATC	-10	True	NA	NA	False	NA	NA	NA	36149496	36137261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36149336
transcript_36362.known	chr12	+	593	2	FSM	ENSG00000170633.17	ENST00000555076.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTATTTTTAACTTAA	19	True	NA	NA	False	NA	NA	NA	121400146	121423906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121423385
transcript_36363.known	chr12	+	1722	7	FSM	ENSG00000170633.17	ENST00000392464.3	1722	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	179.068345114993	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTCTTCTTCAAACGGGG	16	True	NA	17	True	AATAAA	-18	NA	121400143	121430623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385_121423518_121430030
transcript_36366.known	chr12	+	2138	2	FSM	ENSG00000276045.3	ENST00000646827.1	2138	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAGAAAAAAAAA	13	True	NA	NA	False	NA	NA	NA	121626549	121642677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121627051_121641040
transcript_36369.known	chr12	-	879	6	FSM	ENSG00000139714.12	ENST00000542364.1	879	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.60768096208106	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGCCTGGGCCTATGGG	3	True	NA	NA	False	AATAAA	-15	NA	121672631	121651391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121651645_121652727_121652809_121654273_121654434_121659190_121659349_121669338_121669513_121672578
transcript_36374.known	chr12	+	7510	12	FSM	ENSG00000188735.13	ENST00000449592.7	7510	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_10	15.6569631751425	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTCTGACTGTGATTC	-25	True	NA	20	True	AGTAAA	-20	NA	121712751	121782068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121770906_121770973_121771487_121771550_121773420_121773514_121774657_121774723_121775061_121775131_121775608
transcript_36376.nnic	chr12	-	817	5	NNC	ENSG00000139725.8	novel	1485	4	NA	NA	-4	93	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	70.1676563667335	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTCACAAGAAATAACCAT	-11	True	NA	NA	False	AATAAA	-33	NA	121793692	121780393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_121780681_121780871_121781007_121781082_121781193_121793151_121793240_121793495
transcript_36377.known	chr12	-	2435	5	FSM	ENSG00000139725.8	ENST00000267205.7	2435	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	23.1786539729985	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTCCTTTCTGCATT	-7	True	NA	-5	True	AATAAA	-21	NA	121793688	121777753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121779663_121780871_121781007_121781082_121781193_121793151_121793240_121793495
transcript_3638.known	chr1	-	1282	5	FSM	ENSG00000054116.12	ENST00000373166.8	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_2	27.0416345659799	4014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTGTTTTCTTTCT	0	True	NA	0	True	AATAAA	-26	NA	36149486	36136571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
transcript_36380.nic	chr12	-	1040	5	NIC	ENSG00000212694.8	novel	1521	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	21	junction_1	8.38152730712011	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-3	True	NA	-3	True	AATAAA	-19	NA	121802946	121795266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121802630
transcript_36386.known	chr12	-	1485	4	FSM	ENSG00000139725.8	ENST00000537171.5	1485	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	7.58653778449403	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCCCTTCACGGGCCA	9670	False	NA	NA	False	NA	NA	NA	121794262	121780486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121781007_121781082_121781193_121793151_121793240_121793495
transcript_3639.known	chr1	-	1336	5	FSM	ENSG00000054116.12	ENST00000616395.4	1336	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	197.68962415868	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	6437	False	NA	2	True	AATAAA	-28	NA	36149514	36136569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139844_36140068_36140167_36149336
transcript_36390.known	chr12	-	875	4	FSM	ENSG00000212694.8	ENST00000541694.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	4.92160768674447	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTGTGCAAGCTTGT	0	True	NA	NA	False	NA	NA	NA	121802943	121795892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630
transcript_36394.known	chr12	-	1220	4	FSM	ENSG00000212694.8	ENST00000542933.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	16.9771087709958	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	9207	False	NA	-3	True	AATAAA	-19	NA	121802910	121795266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802878
transcript_36396.known	chr12	-	1419	14	FSM	ENSG00000158104.11	ENST00000289004.8	1419	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.56136793309111	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTCTGTGTTTGTGT	-3	True	NA	NA	False	ATTAAA	-17	NA	121858859	121839526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121839839_121839931_121840049_121843709_121843833_121846861_121846934_121847051_121847215_121848998_121849077_121849686_121849791_121854702_121854793_121856323_121856407_121856582_121856626_121857327_121857433_121857756_121857820_121858686_121858714_121858820
transcript_36399.nnic	chr12	+	685	3	Antisense	novelGene_ENSG00000158104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGTGCTGTATTTTCC	NA	False	NA	NA	False	AATAAA	-30	NA	121839727	121848268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_121840010_121847077_121847211_121847998
transcript_3640.known	chr1	+	3339	13	FSM	ENSG00000054118.15	ENST00000469141.6	3339	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	223.293839791627	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACCGCGAGAGGCATCC	-19	True	NA	NA	False	NA	NA	NA	36224431	36304148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36224506_36224970_36225103_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_36406.known	chr12	+	516	4	FSM	ENSG00000110801.14	ENST00000542602.1	516	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	253.680025929429	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGGATCTGGAAGAGGC	-24	True	NA	NA	False	NA	NA	NA	121888785	121916399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121903005_121903108_121915855_121915945_121916283
transcript_36408.known	chr12	+	492	2	FSM	ENSG00000158023.10	ENST00000545988.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGACATTCCACTGTTTC	29	False	NA	20	True	ATTAAA	-33	NA	122001703	122003927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122001920_122003651
transcript_36409.known	chr12	+	1195	7	FSM	ENSG00000110801.14	ENST00000537407.5	1195	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	270.300861181676	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTCACCCCAGCTG	0	True	NA	24	True	AATAAA	-23	NA	121888731	121916644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121910941_121911007_121915855_121915945_121916283
transcript_36410.known	chr12	+	534	3	FSM	ENSG00000110801.14	ENST00000538613.5	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	28	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGGCCACTCAAGTCC	-26	True	NA	NA	False	NA	NA	NA	121888783	121899853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121894738_121894842_121899633
transcript_36411.known	chr12	+	3420	18	FSM	ENSG00000158023.10	ENST00000397454.2	3420	18	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_17	5.1348594924224	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTCTCAGTTATGT	-8	True	NA	17	True	AATAAA	-18	NA	121918591	121972069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121918709_121921285_121921684_121923621_121923991_121931745_121931887_121934246_121934357_121942533_121942646_121942894_121942976_121948983_121949062_121951479_121951531_121954119_121954335_121957073_121957269_121958271_121958523_121958942_121959095_121960584_121960759_121961977_121962163_121966954_121967070_121968005_121968170_121971557
transcript_36412.known	chr12	+	3729	22	FSM	ENSG00000158023.10	ENST00000288912.9	3729	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	8.16441035053249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACAAAGTTGGACATTCC	-8	True	NA	12	True	ATTAAA	-25	NA	121918591	122003919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121918696_121921285_121921684_121923621_121923991_121931745_121931887_121934246_121934357_121942533_121942646_121942894_121942976_121948983_121949062_121951479_121951531_121954119_121954335_121957073_121957269_121958271_121958523_121958942_121959095_121960584_121960759_121961977_121962163_121966954_121967070_121968005_121968170_121975243_121975335_121975541_121975686_121999715_121999945_122001496_122001599_122003651
transcript_36414.known	chr12	+	851	4	FSM	ENSG00000256546.3	ENST00000538790.1	851	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.25718035235908	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCAGGGGAAAACAGGAG	NA	False	NA	63	True	CATAAA	-8	NA	122063305	122068616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122063532_122064549_122064683_122068027_122068192_122068288
transcript_36415.nnic	chr12	+	1382	4	NNC	ENSG00000256546.3	novel	1055	5	NA	NA	-399	6114	intron_retention	FALSE	non_canonical	0	0	junction_3	7.58653778449403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTATTGCTGCTTT	468	False	NA	NA	False	AATAAA	-31	NA	122063877	122074730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_122064683_122068027_122068192_122068288_122068634_122074662
transcript_36416.nic	chr12	+	762	4	ISM	ENSG00000256546.3	ENST00000540968.2	1055	5	890	10	-38	0	3prime_fragment	FALSE	canonical	1	5	junction_1	6.12825877028341	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCACAAAATTCACTCAAA	829	False	NA	5	True	ATTAAA	-17	NA	122064238	122068558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_122064434_122064549_122064683_122068027_122068192_122068288
transcript_36418.known	chr12	+	850	3	FSM	ENSG00000256546.3	ENST00000653475.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	6.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACTCAAAATAGATCATA	-5	True	NA	15	True	ATTAAA	-27	NA	122064276	122068568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122064683_122068027_122068192_122068288
transcript_36428.known	chr12	-	732	6	FSM	ENSG00000184047.20	ENST00000541656.6	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	255.713433358516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTCCCGGAAAGCAGAA	-1	True	NA	NA	False	NA	NA	NA	122225973	122208505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225786
transcript_36433.known	chr12	-	1429	6	FSM	ENSG00000184047.20	ENST00000540535.6	1429	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	284.280424932847	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACCTGGTGCTCTCAAC	12	True	NA	-4	True	NA	NA	NA	122226022	122207818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225825
transcript_36435.known	chr12	-	1859	5	FSM	ENSG00000184047.20	ENST00000443649.9	1859	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	312.699036615081	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCCTTCCTTGAG	928	False	NA	86	True	NA	NA	NA	122226568	122207662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122225964
transcript_36440.known	chr12	+	2891	3	FSM	ENSG00000176383.9	ENST00000324189.5	2891	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTGACTAATCTTTAA	-10	True	NA	NA	False	AATAAA	-21	NA	122203708	122208952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122203802_122204521_122204685_122206317
transcript_36441.known	chr12	+	447	2	FSM	ENSG00000176383.9	ENST00000538257.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCCCCATTGATGATG	24	False	NA	NA	False	NA	NA	NA	122203772	122207147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122203802_122206729
transcript_36442.known	chr12	+	2749	2	FSM	ENSG00000176383.9	ENST00000546192.1	2749	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCATCACCTTGACTAA	NA	False	NA	NA	False	AATAAA	-14	NA	122203680	122208945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122203802_122206317
transcript_36443.known	chr12	-	1338	5	FSM	ENSG00000184047.20	ENST00000353548.11	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	266.756911812984	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTATGCAGCCTCCTTC	-18	True	NA	80	True	NA	NA	NA	122226052	122207668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224511_122224645_122225964
transcript_36444.known	chr12	+	663	3	FSM	ENSG00000176383.9	ENST00000545141.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTGACTAATCTTTAA	10	True	NA	NA	False	AATAAA	-21	NA	122203728	122208952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122203802_122207695_122207813_122208479
transcript_36445.known	chr12	-	1336	6	FSM	ENSG00000184047.20	ENST00000342392.3	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	275.314075194132	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCCTCTTGTTCCTTC	-18	True	NA	-25	True	NA	NA	NA	122226052	122207773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644_122224749_122225964
transcript_36446.known	chr12	-	1418	7	FSM	ENSG00000184047.20	ENST00000267169.11	1418	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	313.48546838552	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATCAACAGGACTTAA	-5	True	NA	21	True	NA	NA	NA	122226039	122207793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122209772_122209859_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_36447.known	chr12	-	4559	13	FSM	ENSG00000139719.11	ENST00000267199.9	4559	13	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	56.8565446247542	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGTCTTGCTATA	-16	True	NA	-34	True	AATAAA	-17	NA	122266494	122229563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_36448.known	chr12	-	1173	5	FSM	ENSG00000139719.11	ENST00000451053.3	1173	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	236.059711725656	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTATGTTTCAGGTA	16	True	NA	0	True	AATAAA	-20	NA	122266416	122252861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122253544_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_36449.known	chr12	-	1523	7	FSM	ENSG00000184047.20	ENST00000644227.1	1523	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	328.462791736835	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAGAAAATGCGTCTC	1	True	NA	54	True	NA	NA	NA	122226033	122207694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122220529_122220628_122224511_122224645_122225964
transcript_36452.known	chr12	-	5229	24	FSM	ENSG00000130779.22	ENST00000537178.5	5229	24	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_9	30.1445164408981	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATAGCATCTTGTGG	1049	False	122422670	NA	False	AAAAAG	-40	NA	122422632	122272042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122273101_122274037_122274163_122278153_122278204_122278791_122278943_122279027_122279146_122288488_122288542_122309761_122309883_122316748_122316856_122319231_122319349_122327946_122328163_122328260_122328427_122332986_122333144_122334026_122334111_122334647_122334706_122336631_122336749_122340752_122341698_122352725_122352787_122354452_122354557_122355114_122355313_122360958_122361182_122363982_122364108_122377388_122377961_122380367_122380559_122422520
transcript_36461.known	chr12	-	4113	14	FSM	ENSG00000033030.15	ENST00000633063.3	4113	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	29.9020095899054	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTACATAGTGTTTTTAAC	2	True	NA	-4	True	AATAAA	-18	NA	122500932	122471599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122483278_122483345_122483459_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498870_122500641
transcript_36464.nic	chr12	-	2736	12	NIC	ENSG00000033030.15	novel	4255	14	NA	NA	55	0	combination_of_known_junctions	FALSE	non_canonical	3	17	junction_7	27.5095775958871	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGACTTTGAATACAAA	NA	False	NA	-5	True	AATAAA	-20	NA	122501018	122472892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_36468.known	chr12	-	4255	14	FSM	ENSG00000033030.15	ENST00000672018.1	4255	14	0	0	0	0	multi-exon	TRUE	non_canonical	3	70	junction_8	14.8539238336016	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATAGTGTTTTTAACC	NA	False	NA	-3	True	AATAAA	-19	NA	122501073	122471598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122483278_122483345_122483459_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_36470.nic	chr12	-	902	6	NIC	ENSG00000033030.15	novel	4255	14	NA	NA	55	-1339	intron_retention	FALSE	non_canonical	3	82	junction_3	9.45304183847718	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAAGTCTTCAGCCACAT	NA	False	NA	NA	False	AATAAA	-16	NA	122501018	122483340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_36472.nnic	chr12	-	1735	6	NNC	ENSG00000033030.15	novel	4255	14	NA	NA	55	-5549	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	41.0998783453187	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAACAAGTGAAATG	NA	False	NA	NA	False	AAGAAA	-4	NA	122501018	122487550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_122488078_122488856_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_36473.known	chr12	+	455	1	FSM	ENSG00000275265.1	ENST00000619123.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCTTTGCTACAGAGA	NA	False	NA	NA	False	AATAAA	-26	NA	122501186	122501641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122501200_122501600
transcript_36491.known	chr12	-	1956	11	FSM	ENSG00000111011.18	ENST00000433877.6	1956	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	237.886527571445	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	18	True	NA	-40	True	AATAAA	-13	NA	122526936	122505058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_36494.known	chr12	-	2001	11	FSM	ENSG00000111011.18	ENST00000532695.5	2001	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	238.828725240495	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-6	False	NA	-40	True	AATAAA	-13	NA	122527000	122505058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_36510.known	chr12	-	3461	10	FSM	ENSG00000111011.18	ENST00000331738.12	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_3	106.304593817326	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCCAAGTGATCTTC	18	True	NA	NA	False	AATAAA	-18	NA	122526936	122503453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_36514.nic	chr12	-	2284	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-28	333	combination_of_known_junctions	FALSE	canonical	3	330	junction_3	112.648365815877	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCATGCTTTTTGC	NA	False	NA	NA	False	AATAAA	-15	NA	122527028	122504725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_36519.nic	chr12	-	1947	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	330	junction_3	112.648365815877	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	NA	False	NA	-40	True	AATAAA	-13	NA	122527024	122505058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_36538.known	chr12	-	1041	8	FSM	ENSG00000111011.18	ENST00000527399.3	1041	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	298.008354902739	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTTTTTCATTCTT	-1	True	NA	37	True	AAGAAA	-8	NA	122526995	122511110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122511189_122515104_122515228_122517230_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_36549.known	chr12	-	1146	9	FSM	ENSG00000111011.18	ENST00000525335.6	1146	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	307.245601066964	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATGCTTTGGCAGGGC	5	True	NA	NA	False	AATGAA	-24	NA	122526949	122508249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122508448_122511108_122511189_122514711_122514729_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522330_122526847
transcript_36550.known	chr12	-	562	6	FSM	ENSG00000111011.18	ENST00000528279.1	562	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	255.04744656632	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGACTCAGATAGCAAAAT	14	True	NA	NA	False	NA	NA	NA	122526940	122520545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122520582_122521384_122521429_122522142_122522300_122522798_122522907_122526169_122526294_122526847
transcript_36554.nic	chr12	+	2559	8	NIC	ENSG00000184445.12	novel	6974	64	NA	NA	-45	18286	combination_of_known_junctions	FALSE	canonical	3	95	junction_7	9.55328771274314	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAATAACCATGAATTCC	3	True	NA	NA	False	ATTAAA	-14	NA	122527200	122545966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_122527352_122530021_122530193_122534663_122534785_122538338_122538455_122539675_122539755_122542049_122542128_122543599_122543635_122544158
transcript_36555.nic	chr12	+	1180	7	ISM	ENSG00000184445.12	ENST00000450485.6	3655	39	-47	82269	-45	16383	5prime_fragment	FALSE	canonical	3	111	junction_3	5.25198375219624	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTATAACTGATTGAT	3	True	NA	NA	False	NA	NA	NA	122527200	122544063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_122527352_122530021_122530193_122534663_122534785_122538338_122538455_122539675_122539755_122542049_122542128_122543599
transcript_36557.known	chr12	+	331	2	FSM	ENSG00000184445.12	ENST00000535410.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTATTGGACTCCACTG	-3	True	NA	NA	False	AATAAA	-19	NA	122527245	122527680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122527352_122527455
transcript_3656.known	chr1	+	4405	12	FSM	ENSG00000054118.15	ENST00000354618.10	4405	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	161.828396000412	4104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	-8	True	NA	20	True	AATAAA	-24	NA	36224442	36305357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_36564.known	chr12	+	2719	8	FSM	ENSG00000139726.11	ENST00000280557.11	2719	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	516.092935785162	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGAATCATTTTTTTAA	-14	True	NA	17	True	ATTAAA	-18	NA	122752823	122771064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033
transcript_3657.known	chr1	+	2544	16	FSM	ENSG00000214193.11	ENST00000453908.8	2544	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	6.05530070819498	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGCCTGCGCGCGGCTA	6	True	NA	25	True	NA	NA	NA	36306367	36321347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36306425_36306597_36306756_36306841_36306906_36307166_36307286_36307516_36307608_36307769_36307826_36307917_36307964_36308108_36308210_36308388_36308476_36309547_36309591_36319070_36319165_36319259_36319313_36319441_36319537_36319674_36320799_36320914_36320979_36321055
transcript_36586.known	chr12	+	671	4	FSM	ENSG00000139726.11	ENST00000539463.1	671	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	642.763305320603	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCAGGCACCTG	-11	True	NA	NA	False	ACTAAA	-17	NA	122752826	122763256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844
transcript_3659.nnic	chr1	+	569	3	NNC	ENSG00000214193.11	novel	2043	5	NA	NA	-105	-117	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGCCGGTCTGGTCGCT	NA	False	NA	6	True	AGTAAA	-17	NA	36320498	36321230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_36320829_36320914_36320979_36321055
transcript_36590.known	chr12	+	699	2	FSM	ENSG00000139726.11	ENST00000537955.1	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	1559	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGAGTGTTGGGTGG	9	True	NA	NA	False	NA	NA	NA	122752846	122754287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122752951_122753692
transcript_36593.nic	chr12	+	989	8	ISM	ENSG00000130787.14	ENST00000452196.6	2054	18	-29	3029	-5	-1004	5prime_fragment	FALSE	canonical	1	34	junction_1	26.0462696612261	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCACTACTTTACCAAG	-18	True	NA	NA	False	AATAGA	-34	NA	122835451	122854355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042
transcript_36595.known	chr12	-	879	4	FSM	ENSG00000139722.7	ENST00000535765.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	114.874811086775	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCCACACCAGCCG	-23	True	NA	NA	False	NA	NA	NA	122896127	122867153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122867608_122868479_122868563_122870889_122871056_122895951
transcript_3660.nnic	chr1	+	1964	2	NIC	ENSG00000214193.11	novel	2387	6	NA	NA	670	-43	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTCCTTATTAATATA	620	False	NA	13	True	ATTAAA	-16	NA	36321273	36329178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_36321779_36327719
transcript_36604.known	chr12	+	1949	8	FSM	ENSG00000111325.16	ENST00000538755.5	1949	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	62.3891670345526	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	8309	False	NA	NA	False	NA	NA	NA	122974702	122979762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122977980_122978092_122978359_122978570_122978752_122979011_122979082
transcript_36608.known	chr12	+	1780	7	FSM	ENSG00000111325.16	ENST00000228922.11	1780	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	28.9678941051794	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTTGTGTTTGCGGCT	-8	True	NA	13	True	TATAAA	-13	NA	122975219	122980041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_3661.known	chr1	+	3273	12	FSM	ENSG00000214193.11	ENST00000480549.6	3273	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	9.16875758772579	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTGCTGAACATGTACAG	8	True	NA	105	True	NA	NA	NA	36307116	36324977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36307286_36307516_36307608_36307769_36307826_36308388_36308476_36309547_36309591_36319070_36319165_36319674_36320799_36320914_36320979_36321055_36321210_36321723_36321779_36322366_36322665_36323939
transcript_36612.known	chr12	+	1481	7	FSM	ENSG00000111325.16	ENST00000545317.5	1481	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	68.9822843602294	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	76	False	NA	19	True	AATAAA	-20	NA	122974816	122979438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976600_122976768_122976870_122976964_122978324_122978570_122978752_122979011_122979082
transcript_36617.known	chr12	+	1465	7	FSM	ENSG00000111325.16	ENST00000545612.5	1465	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	55.4166040099896	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	11	True	NA	19	True	AATAAA	-20	NA	122974751	122979438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978359_122978570_122978752_122979011_122979082
transcript_36619.known	chr12	+	1488	7	FSM	ENSG00000111325.16	ENST00000454694.6	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	45.0582955736233	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	230	False	NA	NA	False	NA	NA	NA	122974970	122979762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_36634.known	chr12	+	996	6	FSM	ENSG00000111325.16	ENST00000542117.5	996	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	49.3582819798258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGAGTGTGTGACCC	37	False	NA	NA	False	NA	NA	NA	122974777	122979005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752
transcript_36639.known	chr12	+	1956	6	FSM	ENSG00000111325.16	ENST00000536150.5	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	53.443802259944	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTTGCGGCTGT	-14	True	NA	15	True	TATAAA	-15	NA	122974726	122980043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_36652.known	chr12	+	910	6	FSM	ENSG00000182196.14	ENST00000426960.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	640.329727562293	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAGTCTCTTCTCA	-1	True	NA	-97	True	NA	NA	NA	122980262	122982795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980386_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_36656.nic	chr12	+	1311	6	Fusion	ENSG00000111325.16_ENSG00000182196.14	novel	1491	6	NA	NA	-51	0	multi-exon	FALSE	canonical	3	45	junction_1	651.265045891456	612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	4781	False	NA	17	True	ATTAAA	-17	NA	122980008	122982909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_+_122980386_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_3666.known	chr1	-	860	2	FSM	ENSG00000181817.6	ENST00000315732.3	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	2968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTCTAAGTGTCTCCA	-5	True	NA	-30	True	ATTAAA	-15	NA	36397908	36393435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36394154_36397766
transcript_36666.known	chr12	+	1591	6	FSM	ENSG00000182196.14	ENST00000543566.6	1591	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	422.956924520689	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTGTGGCTTTTTGT	4832	False	NA	21	True	ATTAAA	-21	NA	122980059	122982913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980746_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_36669.known	chr12	+	1023	6	FSM	ENSG00000182196.14	ENST00000315580.10	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	581.252096770412	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	-19	True	NA	17	True	ATTAAA	-17	NA	122980680	122982909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980746_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_36671.known	chr12	+	1491	6	FSM	ENSG00000182196.14	ENST00000453766.7	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_2	444.630813147267	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	4961	False	NA	17	True	ATTAAA	-17	NA	122980188	122982909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980746_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_36677.known	chr12	+	796	6	FSM	ENSG00000182196.14	ENST00000439686.6	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	565.514067022209	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCGGCCCAGCCTGGG	48	False	NA	NA	False	NA	NA	NA	122980747	122982706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980813_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_3668.known	chr1	-	1455	10	FSM	ENSG00000116885.18	ENST00000235532.9	1455	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	8.24321644044063	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCATTTTATTCTTA	-18	True	NA	-8	True	AATATA	-20	NA	36450451	36417905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_367.known	SIRV5	+	546	2	FSM	SIRV5A	SIRV511	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1144_1987
transcript_36704.known	chr12	+	562	2	FSM	ENSG00000182196.14	ENST00000536073.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	1646	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGTTCTGTGGCTT	162	False	NA	16	True	ATTAAA	-16	NA	122981952	122982908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122982075_122982468
transcript_36705.known	chr12	-	6369	24	FSM	ENSG00000051825.15	ENST00000606320.6	6369	24	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_15	14.4842003745976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAGCAAATCTGCCACC	-17	True	NA	NA	False	AAAAAG	-17	NA	123233141	123154214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
transcript_36715.known	chr12	+	1682	4	FSM	ENSG00000130921.9	ENST00000536130.2	1682	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	52.6392333615231	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAAGTCAATTTTTAT	1	True	NA	6	True	AATAAA	-14	NA	123233461	123257929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123233739_123233925_123253646_123253957_123256812
transcript_36717.known	chr12	-	1161	4	FSM	ENSG00000111328.7	ENST00000538446.5	1161	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	1192.4683084538	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	3000	False	NA	-33	True	AATAAA	-19	NA	123269239	123261002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123269104
transcript_36718.nnic	chr12	-	1366	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	625	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_3	1180.6860529182	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	1723	False	NA	-33	True	AATAAA	-19	NA	123270516	123261002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123270176
transcript_36719.known	chr12	-	1281	4	FSM	ENSG00000111328.7	ENST00000535979.5	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_3	1140.62682572152	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	1098	False	NA	-33	True	AATAAA	-19	NA	123271141	123261002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123270886
transcript_36720.nnic	chr12	-	1109	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	-326	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	1194.82476632443	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	772	False	NA	-33	True	AATAAA	-19	NA	123271467	123261002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123271384
transcript_36722.known	chr12	-	931	4	FSM	ENSG00000111328.7	ENST00000544658.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	1178.80089733405	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTAACTTCTTTTTT	NA	False	NA	NA	False	NA	NA	NA	123272334	123261275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123272156
transcript_36727.known	chr12	+	2056	3	FSM	ENSG00000130921.9	ENST00000366329.7	2056	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	54	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCGGGCATGGTGGCTC	-15	True	NA	NA	False	AAAACA	-1	NA	123233445	123258079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233925_123253646_123253957_123256812
transcript_36731.known	chr12	+	1554	3	FSM	ENSG00000130921.9	ENST00000253233.6	1554	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	18.5	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGTCAAACATTAAT	-25	True	NA	37	True	AATAAA	-45	NA	123233435	123257960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123253646_123253957_123256812
transcript_36734.known	chr12	+	1634	3	FSM	ENSG00000130921.9	ENST00000538888.6	1634	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGGGGTTCTGGGGTG	-25	True	NA	NA	False	NA	NA	NA	123233435	123257797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123253646_123254200_123256812
transcript_36735.known	chr12	+	2648	3	FSM	ENSG00000130921.9	ENST00000425637.3	2648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGTAAAGTCAATTTT	0	True	NA	3	True	AATAAA	-11	NA	123233384	123257926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123253646_123255034_123256812
transcript_36740.known	chr12	+	3022	2	FSM	ENSG00000130921.9	ENST00000546132.2	3022	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGAGGCTGAGGCAGGA	-12	True	NA	NA	False	AATACA	-44	NA	123233448	123256585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123253646
transcript_36742.known	chr12	-	513	2	FSM	ENSG00000051825.15	ENST00000369865.3	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGCTAACATGGTGA	23	True	NA	NA	False	NA	NA	NA	123233101	123230036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123230523_123233074
transcript_36743.known	chr12	+	2234	3	FSM	ENSG00000130921.9	ENST00000680325.1	2234	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTATGTTTTGTAATAA	-25	True	NA	-31	True	NA	NA	NA	123233435	123257892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123253646_123254705_123256812
transcript_36749.nic	chr12	-	2560	18	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-47	31708	-43	-31708	5prime_fragment	FALSE	canonical	3	30	junction_15	8.87124353953358	604	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGTATAGATCCAGA	321	False	NA	NA	False	AAAAAG	-1	NA	123364890	123320816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_3675.nnic	chr1	-	790	5	NNC	ENSG00000116885.18	novel	767	5	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	17.4928556845359	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTATTTAGTGCCTT	-10	True	NA	NA	False	AATAAA	-21	NA	36450488	36428298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_36428476_36431801_36431861_36432421_36432590_36438755_36438911_36450257
transcript_36750.nic	chr12	-	2563	18	ISM	ENSG00000139697.14	ENST00000602398.3	11128	32	-43	31708	-43	-31708	5prime_fragment	FALSE	canonical	3	29	junction_15	9.0213127118498	584	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGTATAGATCCAGA	321	False	NA	NA	False	AAAAAG	-1	NA	123364890	123320816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
transcript_3676.known	chr1	-	767	5	FSM	ENSG00000116885.18	ENST00000354267.3	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	11.6913429510899	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTATTTAGTGCCTT	-10	True	NA	NA	False	AATAAA	-21	NA	36450443	36428298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36428476_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_36765.nnic	chr12	+	530	3	NNC	ENSG00000256092.3	novel	783	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGTAAAGTCATTCT	7584	False	NA	10	True	AATAAA	-20	NA	123363868	123365789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123364008_123364989_123365116_123365524
transcript_36768.nnic	chr12	+	484	2	FSM	ENSG00000256092.3	ENST00000686582.1	468	2	-16	0	-4	0	multi-exon	FALSE	canonical	3	7	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGTAAAGTCATTCT	-37	True	NA	10	True	AATAAA	-20	NA	123364917	123365789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123365137_123365524
transcript_36769.known	chr12	+	752	2	FSM	ENSG00000256092.3	ENST00000543072.2	783	2	31	0	5	0	multi-exon	FALSE	canonical	3	14	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTCTCACACACATAGAA	-2	True	NA	NA	False	TTTAAA	-41	NA	123364952	123366113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123365116_123365524
transcript_36770.known	chr12	+	1774	7	FSM	ENSG00000183955.14	ENST00000437519.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	50.4691875196034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACAGAAAACAACT	13	True	NA	NA	False	AATAAA	-24	NA	123384165	123408507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123384209_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
transcript_36774.nnic	chr12	+	345	2	NNC	ENSG00000183955.14	novel	352	2	NA	NA	-17	-3310	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCTCATCACAGCAAAA	13	True	NA	NA	False	AATAAA	-20	NA	123384114	123385447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123384209_123385196
transcript_36775.nnic	chr12	-	1101	3	NIC	ENSG00000150977.11	novel	1752	4	NA	NA	149	-350	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	26	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTATCTAGAGTGGT	212	False	NA	-8	True	ATTAAA	-23	NA	123436535	123415388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_123415922_123423043_123423158_123436081
transcript_36776.known	chr12	-	3933	7	FSM	ENSG00000188026.13	ENST00000376874.9	3933	7	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_2	14.135259302735	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTACATGTGTGTA	-1	True	NA	-8	True	AATAAA	-20	NA	123533719	123470053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123472683_123484179_123484273_123485632_123485806_123498543_123498766_123499417_123499537_123523494_123523646_123533173
transcript_36796.known	chr12	+	2161	2	FSM	ENSG00000184209.15	ENST00000527158.2	2161	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTTCATGGACATTACT	-32	True	NA	NA	False	TTTAAA	-42	NA	123458118	123473154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123458217_123471091
transcript_36797.known	chr12	-	239	1	FSM	ENSG00000274427.1	ENST00000610631.1	239	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTACTTGTCCTTTTTT	4734	False	NA	-3	True	AATAAA	-14	NA	123515513	123515274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123515300_123515500
transcript_36800.known	chr12	+	2544	4	FSM	ENSG00000086598.11	ENST00000262225.8	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	3706	junction_2	261.929167694033	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGTAATGTCTCGAT	10	True	NA	10	True	AATAAA	-20	NA	123584551	123598582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123584817_123586746_123586940_123590341_123590450_123596604
transcript_36807.known	chr12	+	433	2	FSM	ENSG00000086598.11	ENST00000544188.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACATCACATTCCAAGAG	30	False	NA	NA	False	NA	NA	NA	123584597	123586960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123584817_123586746
transcript_36811.known	chr12	+	2656	14	FSM	ENSG00000111364.16	ENST00000238146.9	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_11	28.348423873201	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	-21	True	NA	27	True	AATAAA	-21	NA	123602098	123620943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431_123619725_123619963
transcript_36841.known	chr12	+	1472	12	FSM	ENSG00000111358.14	ENST00000228955.11	1472	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	27.1938252592644	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATGAGTAAGGAGAA	-4	True	NA	115	True	NA	NA	NA	123633828	123660829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123633873_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_36844.nnic	chr12	+	1201	11	NNC	ENSG00000111364.16	novel	2656	14	NA	NA	-4	-299	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_10	88.0477711245435	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCAGTGTTGGTTT	-27	True	NA	10	True	ATTAAA	-20	NA	123602092	123617571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617475
transcript_36854.known	chr12	+	585	3	FSM	ENSG00000111358.14	ENST00000543005.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTATTTCTGGCTTTTC	-4	True	NA	NA	False	NA	NA	NA	123633828	123648396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123633873_123645454_123645562_123647962
transcript_36855.known	chr12	+	2767	11	FSM	ENSG00000111364.16	ENST00000542286.5	2767	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_10	75.3562207120288	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAGGTAAAGTTTACT	4213	False	NA	NA	False	AAAAAG	-34	NA	123602076	123619716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619447
transcript_36856.known	chr12	+	3327	13	FSM	ENSG00000111358.14	ENST00000543341.7	3327	13	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_2	9.64473085852235	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTGAATTATTTCC	-4	True	NA	14	True	AATAAA	-16	NA	123633828	123662604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_36857.known	chr12	+	2513	18	FSM	ENSG00000168778.13	ENST00000426174.6	2513	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	8.36329101958079	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	-11	True	NA	NA	False	NA	NA	NA	123671112	123708007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673617_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123694841_123694977_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
transcript_36859.nnic	chr12	+	419	2	NNC	ENSG00000197653.16	novel	3484	20	NA	NA	7	-49143	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGATGTGACTTGGATT	-8	True	NA	NA	False	ATTAAA	-23	NA	123762307	123764518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123762551_123764342
transcript_36862.known	chr12	+	700	4	FSM	ENSG00000274874.2	ENST00000618862.2	700	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.7205958328763	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCGCTCATCCAAGCG	-26	True	NA	NA	False	AATAAA	-11	NA	123973214	124088594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973353_123973885_123974021_123988042_123988139_124088263
transcript_36869.known	chr12	+	4262	5	FSM	ENSG00000179195.16	ENST00000392404.7	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	6.65206734782504	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTGACATGTAG	-29	True	NA	16	True	AATAAA	-17	NA	123973211	124015426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973304_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_36870.known	chr12	+	4321	5	FSM	ENSG00000179195.16	ENST00000538932.6	4321	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	11.1214882097676	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGTTGTGTGAATTCA	-26	True	NA	29	True	AATAAA	-30	NA	123973214	124015439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973353_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_36872.known	chr12	+	474	5	FSM	ENSG00000179195.16	ENST00000546098.5	474	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.5784306013154	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGCAGTATCTCATCCTT	244	False	NA	NA	False	GGGGCT	-9	NA	123973484	124011703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973512_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_36874.known	chr12	+	455	4	FSM	ENSG00000179195.16	ENST00000543017.5	455	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.7194104181711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTACTCTACAAGAGGAA	32	True	NA	NA	False	NA	NA	NA	123973272	124011773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973304_123973885_123974021_124011380_124011442_124011545
transcript_36875.known	chr12	+	567	4	FSM	ENSG00000179195.16	ENST00000541448.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	21.853044537445	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTACAAGAGGAAGATTC	-26	True	NA	NA	False	NA	NA	NA	123973214	124011778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973353_123973885_123974021_124011380_124011442_124011545
transcript_36876.known	chr12	+	753	2	FSM	ENSG00000179195.16	ENST00000540009.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	-22	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973304_123973885
transcript_36878.known	chr12	+	802	2	FSM	ENSG00000179195.16	ENST00000542820.5	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	-22	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973353_123973885
transcript_36889.known	chr12	-	622	2	FSM	ENSG00000150991.16	ENST00000540351.1	622	2	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAAGACCATCACCCTCG	5975	False	NA	NA	False	NA	NA	NA	124914141	124913289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124913775_124914004
transcript_36891.nnic	chr12	-	2016	2	NNC	ENSG00000150991.16	novel	2193	2	NA	NA	106	0	intron_retention	FALSE	canonical	0	0	junction_1	0	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTTTTTTTTTTTTTT	10	True	NA	-4	True	AATAAA	-17	NA	124914925	124911645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_124913323_124914586
transcript_36892.known	chr12	-	624	2	FSM	ENSG00000150991.16	ENST00000536661.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGAGTCCACCCTGCACC	5	True	NA	NA	False	AAAACA	-40	NA	124915031	124913586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124913766_124914586
transcript_36893.known	chr12	-	627	2	FSM	ENSG00000150991.16	ENST00000540700.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAACATCCAGAAAGAGTC	5525	False	NA	NA	False	NA	NA	NA	124914591	124913369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124913775_124914369
transcript_36894.known	chr12	-	3745	1	FSM	ENSG00000150991.16	ENST00000536769.1	3745	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTGAAGGGGGTCA	4768	False	NA	38	True	NA	NA	NA	124915348	124911603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124911600_124915300
transcript_36895.known	chr12	-	2193	2	FSM	ENSG00000150991.16	ENST00000339647.6	2193	2	0	0	0	0	multi-exon	FALSE	canonical	3	1903	junction_1	0	8313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTTTTTTTTTTTTTT	-1	True	NA	-4	True	AATAAA	-17	NA	124914650	124911645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124913775_124914586
transcript_36896.known	chr12	-	4559	27	FSM	ENSG00000150990.9	ENST00000308736.7	4559	27	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_24	18.2679351767325	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGTGGAATGCAC	-34	True	NA	-2	True	AATAAA	-17	NA	124989131	124946825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124947888_124948083_124948182_124949985_124950060_124950148_124950244_124950412_124950551_124950689_124950805_124952397_124952571_124953879_124953997_124954086_124954212_124956690_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124975418_124975512_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_36899.known	chr12	-	2806	18	FSM	ENSG00000150990.9	ENST00000679875.1	2806	18	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_15	17.3705792713269	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATGCTAATTCTTAGA	3	True	NA	NA	False	NA	NA	NA	124989094	124956409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124975418_124975512_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_369.known	SIRV5	-	229	1	FSM	SIRV5B	SIRV512	229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1512	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2406	2177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_-_2200_2400
transcript_36900.known	chr12	+	1911	3	FSM	ENSG00000184992.13	ENST00000672415.1	1911	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	3.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAAATCTGTTGTGTCC	0	True	NA	NA	False	NA	NA	NA	124993704	125026499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_124994004_125012533_125012637_125024990
transcript_36902.known	chr12	+	3256	18	FSM	ENSG00000081760.17	ENST00000316519.11	3256	18	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_11	20.1494416796099	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGCTGTGTGTGCAGTG	-4	True	NA	11	True	AATAAA	-23	NA	125065434	125143316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129334_125129461_125134002_125134073_125134793_125134853_125136661_125136865_125142091
transcript_36906.known	chr12	+	5787	4	FSM	ENSG00000139364.11	ENST00000534945.2	5787	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	7.76029781788188	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGACCTCCCAGGCTCAAG	NA	False	NA	NA	False	NA	NA	NA	125349451	125588411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_125350344_125415530_125415678_125519438_125519626_125583850
transcript_36908.known	chr12	-	1316	3	FSM	ENSG00000249267.7	ENST00000653452.1	1316	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTCAAATCTCTAGTTT	NA	False	NA	NA	False	AATAAA	-6	NA	125983388	125966364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_125967343_125969810_125969997_125983236
transcript_36913.known	chr12	-	1469	3	FSM	ENSG00000139370.12	ENST00000545031.5	1469	3	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGATTGCAAAGTCTTG	NA	False	NA	NA	False	NA	NA	NA	128801701	128793894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_128794357_128799258_128799418_128800853
transcript_36914.known	chr12	-	1565	1	FSM	ENSG00000279500.1	ENST00000623017.1	1565	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCCCCATCTTAGCTGA	9242	False	NA	NA	False	NA	NA	NA	128814750	128813185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_128813200_128814800
transcript_36917.known	chr12	+	440	3	FSM	ENSG00000249196.6	ENST00000541320.5	440	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCAATGTCTCAGTGA	NA	False	NA	NA	False	AATAAA	-16	NA	129109694	129113294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_129109758_129110992_129111140_129113064
transcript_36923.known	chr12	+	1475	6	FSM	ENSG00000132341.12	ENST00000541630.5	1475	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6213.35318809417	11266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATTCTTGCTGTTAAAA	-5	True	NA	114	True	NA	NA	NA	130872065	130876733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872835_130872913_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_36929.known	chr12	+	2474	7	FSM	ENSG00000132341.12	ENST00000543796.6	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9996	junction_1	1089.01270271134	47472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATCATCTCTAGT	-5	True	NA	35	True	AATATA	-21	NA	130872065	130877678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872583_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_36930.known	chr12	+	572	4	FSM	ENSG00000132341.12	ENST00000541679.7	572	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	5428.50190097497	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTCGTTTAGAATCA	11	True	NA	-18	True	NA	NA	NA	130872081	130876234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872583_130872630_130875654_130875783_130875881
transcript_36931.known	chr12	-	978	5	FSM	ENSG00000256209.2	ENST00000669418.1	978	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAGTTTTATACAGTT	523	False	NA	NA	False	AATAAA	-23	NA	131492997	131462852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_131463098_131465076_131465183_131469222_131469457_131474306_131474459_131492756
transcript_36932.known	chr12	+	3246	18	FSM	ENSG00000061936.10	ENST00000261674.9	3246	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	31.3726348038043	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	2	True	NA	17	True	AATAAA	-29	NA	131711089	131799738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
transcript_36939.nic	chr12	+	1154	5	ISM	ENSG00000061936.10	ENST00000541286.5	3219	19	-250	73993	-194	0	5prime_fragment	FALSE	canonical	3	82	junction_2	9.98436277385793	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAGTGACGAGAAAAAA	NA	False	NA	NA	False	NA	NA	NA	131710886	131725609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404
transcript_36940.nnic	chr12	+	678	4	NNC	ENSG00000061936.10	novel	1576	3	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	81.2034482026472	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCGTGGTTTCTTCC	NA	False	NA	16	True	AATAAA	-28	NA	131796087	131799737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_131796195_131797177_131797361_131799036_131799110_131799422
transcript_36942.nnic	chr12	+	720	3	NNC	ENSG00000061936.10	novel	3246	18	NA	NA	1	43	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	48.5	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCGTAACAGTCTTTA	-6	True	NA	1	True	AATAAA	-15	NA	131711081	131714538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_131711448_131714070_131714241_131714354
transcript_36944.known	chr12	+	778	2	FSM	ENSG00000061936.10	ENST00000535399.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTTAACAGTATCGT	7	True	NA	-42	True	AAAACA	-21	NA	131711094	131714495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_131711448_131714070
transcript_36946.known	chr12	+	3536	4	FSM	ENSG00000061936.10	ENST00000540469.5	3536	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	43.3769011751134	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAGTGACGAGAAAAAA	-7	True	NA	NA	False	NA	NA	NA	131711080	131725609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_131714194_131714821_131714954_131719453_131719540_131725404
transcript_36949.known	chr12	-	426	3	FSM	ENSG00000255992.1	ENST00000539078.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGCTGCTCCACCACAC	NA	False	NA	NA	False	NA	NA	NA	131929351	131924735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_131924767_131927962_131928191_131929184
transcript_3695.known	chr1	-	953	8	FSM	ENSG00000116898.12	ENST00000373116.6	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	1469	junction_1	78.7253038697708	5829	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAGGAATTTATTCT	-18	True	NA	27	True	GGGGCT	-15	NA	36464384	36455717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
transcript_36950.known	chr12	+	4041	6	FSM	ENSG00000177192.14	ENST00000376649.8	4041	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	32.9448023214588	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTCATTCTCTAAT	3	True	NA	5	True	AATAAA	-19	NA	131929275	131945896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_131929797_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
transcript_36951.known	chr12	+	12289	53	FSM	ENSG00000183495.14	ENST00000389561.7	12289	53	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	29.000478214788	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCATTTTGTCTTTCA	-11	True	NA	10	True	AATAAA	-17	NA	131949941	132080460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_131950037_131960584_131961955_131979693_131979794_131981488_131981597_131982092_131982479_131986513_131986808_131987704_131987891_131989963_131990105_131990635_131990715_131991406_131991457_131992172_131992231_131994866_131994957_132005076_132005185_132006111_132006303_132006699_132006878_132011497_132011635_132013008_132013179_132013489_132013665_132013776_132013914_132017534_132017722_132018209_132018377_132020048_132020219_132021078_132021322_132023776_132023942_132025645_132025805_132027436_132027532_132028016_132028289_132029700_132029904_132029988_132030159_132031952_132032150_132037681_132037794_132037952_132038097_132043303_132043463_132043644_132043729_132044176_132044312_132044670_132044716_132044799_132044954_132045318_132045561_132045726_132045901_132050322_132050460_132050598_132050656_132053145_132053225_132053342_132053598_132054973_132055020_132055098_132055209_132062109_132062324_132062465_132062702_132064667_132064887_132066773_132066970_132067361_132067487_132069494_132069642_132076515_132076594_132077400
transcript_36954.known	chr12	+	2403	2	FSM	ENSG00000183495.14	ENST00000611118.1	2403	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTGACAGTGTCTCCTT	1753	False	NA	16	True	AATAAA	-17	NA	132075700	132078910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132076594_132077400
transcript_36957.nic	chr12	+	565	3	FSM	ENSG00000185684.16	ENST00000685528.1	554	3	5	-16	-2	0	multi-exon	FALSE	canonical	3	12	junction_2	2	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACTGTATTGTACGC	-11	True	NA	28	True	AATAAA	-33	NA	132084287	132085797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132084400_132085256_132085317_132085404
transcript_36960.known	chr12	+	1650	15	FSM	ENSG00000184967.7	ENST00000330579.6	1650	15	0	0	0	0	multi-exon	TRUE	canonical	3	355	junction_5	35.6974960535021	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTCAGGGAGTGTGG	6	True	NA	39	True	AATAAA	-14	NA	132144456	132152468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132144606_132144853_132144975_132145558_132145666_132147280_132147389_132147632_132147783_132147879_132147980_132148071_132148107_132148608_132148660_132148783_132148896_132150980_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
transcript_36967.known	chr12	-	1484	2	FSM	ENSG00000256576.3	ENST00000538731.3	1517	2	33	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCGGCTGGTATTTCC	13	True	NA	2	True	ATTAAA	-28	NA	132189695	132186734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132187702_132189178
transcript_36968.known	chr12	+	391	2	FSM	ENSG00000256312.1	ENST00000535242.1	391	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCGGCAGCAGAGACGG	408	False	NA	NA	False	NA	NA	NA	132190212	132190997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132190334_132190727
transcript_36970.nnic	chr12	+	1195	3	NNC	ENSG00000256943.1	novel	1766	3	NA	NA	-30	2570	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.5	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCAGTTTCCCCAT	NA	False	NA	2	True	AATAAA	-14	NA	132275360	132280899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_132275837_132279965_132280115_132280329
transcript_36971.known	chr12	+	1793	1	FSM	ENSG00000277011.1	ENST00000613430.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGATGTGGCTGAGGTG	30	False	NA	NA	False	AATAAA	-15	NA	132282813	132284606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132282800_132284600
transcript_36974.known	chr12	-	1004	6	FSM	ENSG00000204583.10	ENST00000376608.9	1004	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCGTGTCTCACCCCTT	-18	True	NA	NA	False	AATAAA	-18	NA	132610582	132603150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132603405_132604253_132604377_132604461_132604585_132604705_132604832_132606146_132606265_132610322
transcript_36975.nic	chr12	-	1015	8	ISM	ENSG00000177084.18	ENST00000537064.5	8011	49	-34	52952	-5	3316	5prime_fragment	FALSE	canonical	3	122	junction_2	15.4682030670162	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCAGTTTCTGACAGTA	-28	True	NA	NA	False	ATTAAA	-22	NA	132687381	132677214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
transcript_36977.known	chr12	+	970	5	FSM	ENSG00000176894.10	ENST00000317479.8	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	21.3834047803431	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	-34	True	NA	20	True	AATAAA	-21	NA	132687586	132704985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132687793_132690262_132690377_132695883_132696047_132701249_132701370_132704618
transcript_3698.nnic	chr1	-	1052	2	NNC	ENSG00000284720.1	novel	1521	2	NA	NA	-739	0	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	0	900	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATTAGTGAGAATCTT	NA	False	NA	-20	True	AATAAA	-21	NA	36770464	36768121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_36768612_36769902
transcript_36981.known	chr12	-	11228	18	FSM	ENSG00000072609.18	ENST00000450056.7	11228	18	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_13	68.0782675971645	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTACACCTTAGGATAG	-5	True	NA	52	True	ATTAAA	-21	NA	132887605	132832355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_36982.known	chr12	-	2648	18	FSM	ENSG00000072609.18	ENST00000432561.6	2648	18	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_13	86.694867206773	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGTATGGTATTT	-8	True	NA	-82	True	AATATA	-27	NA	132887608	132840974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869835_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_3699.nnic	chr1	-	955	2	NNC	ENSG00000284720.1	novel	1521	2	NA	NA	-739	-97	at_least_one_novel_splicesite	FALSE	canonical	3	258	junction_1	0	619	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGATTTTCCCCTTTT	NA	False	NA	-16	True	AATAAA	-25	NA	36770464	36768218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_36768612_36769902
transcript_36992.known	chr12	-	2990	16	FSM	ENSG00000072609.18	ENST00000443047.6	2990	16	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_12	90.6091974728099	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-3	True	NA	-14	True	AATAAA	-20	NA	132887603	132840351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_36994.known	chr12	-	8933	24	FSM	ENSG00000090615.16	ENST00000450791.8	8938	24	5	0	0	0	multi-exon	FALSE	canonical	3	10	junction_23	5.78832669239743	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATATTCATTGGAAGC	-8	True	NA	-16	True	AATAAA	-18	NA	132828864	132768913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132773295_132774156_132774321_132775140_132775306_132776633_132776757_132776957_132777091_132777665_132777806_132780797_132780915_132782295_132782494_132784163_132784308_132786338_132786556_132786692_132786788_132789026_132789291_132791215_132791294_132795851_132796221_132796538_132796701_132798339_132798478_132801766_132801970_132804715_132805023_132807176_132807289_132807890_132808550_132813306_132813420_132816539_132816813_132821995_132822312_132828802
transcript_36996.nic	chr12	-	1128	4	FSM	ENSG00000090615.16	ENST00000685580.1	1125	4	-7	4	-4	2	multi-exon	FALSE	canonical	3	10	junction_3	6.12825877028341	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGAAAATGCTTTAT	-17	True	NA	-2	True	AATAAA	-16	NA	132828873	132812951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132813420_132816539_132816813_132821995_132822312_132828802
transcript_36998.nnic	chr12	-	1008	4	FSM	ENSG00000090615.16	ENST00000687165.1	1001	4	-11	4	-4	2	multi-exon	FALSE	canonical	3	10	junction_3	6.84754619472471	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGAAAATGCTTTAT	-17	True	NA	-2	True	AATAAA	-16	NA	132828873	132812951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132813420_132816659_132816813_132821995_132822312_132828802
transcript_37.known	ERCC-00084	+	978	1	FSM	ERCC-00084A	DQ883682	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00084_+_0_1000
transcript_370.known	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_11100_13600
transcript_3700.known	chr1	-	1395	3	FSM	ENSG00000233621.3	ENST00000424989.2	1419	3	21	3	1	0	multi-exon	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTATTTTTCTCTGCTA	-20	True	NA	-2	True	AATAAA	-17	NA	37474411	37454878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37455913_37456366_37456460_37474143
transcript_37000.nic	chr12	-	1026	4	FSM	ENSG00000090615.16	ENST00000685580.1	1125	4	-7	106	-4	31	multi-exon	FALSE	canonical	3	10	junction_3	6.12825877028341	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGGTTTCCTAGTGC	-17	True	NA	-5	True	AATAAA	-14	NA	132828873	132813053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132813420_132816539_132816813_132821995_132822312_132828802
transcript_37002.nnic	chr12	-	859	3	FSM	ENSG00000090615.16	ENST00000685120.1	800	3	-32	-27	-4	0	multi-exon	FALSE	canonical	2	3	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAATGCTTTATTACT	-17	True	NA	2	True	AATAAA	-20	NA	132828873	132812947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132813420_132821995_132822312_132828802
transcript_37003.known	chr12	+	484	1	FSM	ENSG00000232888.4	ENST00000488441.2	484	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	212	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGGACATCAGCCCGC	13	False	NA	NA	False	NA	NA	NA	132825700	132826184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132825700_132826200
transcript_37004.known	chr12	+	555	2	FSM	ENSG00000236617.2	ENST00000424075.2	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGAGTCTCTCAACG	NA	False	NA	NA	False	AATAAA	-26	NA	132887841	132888583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132887933_132888119
transcript_37008.known	chr12	-	6156	5	FSM	ENSG00000196458.11	ENST00000392321.3	6156	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	12.1346610995116	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGATTCTCCCATGCCC	-11	True	NA	-10	True	AATAAA	-13	NA	132956306	132921461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132927163_132932712_132932806_132933034_132933156_132945620_132945798_132956242
transcript_3701.known	chr1	+	2654	6	FSM	ENSG00000163874.11	ENST00000373087.7	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.91160935469109	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATTGTCTTTGTTAT	0	True	NA	34	True	AATAAA	-26	NA	37474579	37484377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482433_37482541_37482736
transcript_37012.known	chr12	-	9342	5	FSM	ENSG00000196458.11	ENST00000360187.9	9342	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	9.08295106229247	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTATCCCCAAATTAAA	-11	True	NA	NA	False	AATAAA	-19	NA	132956306	132918305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132927163_132933034_132933156_132945620_132945798_132948147_132948271_132956242
transcript_37016.known	chr12	-	838	4	FSM	ENSG00000196458.11	ENST00000331711.11	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.68178700572909	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCTCACGGTTCATCA	4	True	NA	NA	False	NA	NA	NA	132956291	132926671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132927163_132933034_132933156_132945620_132945798_132956242
transcript_37019.nnic	chr12	-	1299	4	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-32	2678	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	1.24721912892465	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	NA	False	NA	-14	True	NA	NA	NA	132956338	132942119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132948147_132948271_132956242
transcript_3702.known	chr1	-	4702	7	FSM	ENSG00000163875.16	ENST00000296214.10	4702	7	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_4	32.5955859315678	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCTGATAATTGTTT	-4	True	NA	NA	False	AATAAA	-15	NA	37514766	37489992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_37020.nnic	chr12	-	1217	4	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-32	2596	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	1.24721912892465	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	NA	False	NA	-27	True	AATAAA	-25	NA	132956338	132942201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132948147_132948271_132956242
transcript_37023.nnic	chr12	-	1370	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	211	2678	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	1.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	244	False	NA	-14	True	NA	NA	NA	132956051	132942119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132955761
transcript_37025.nnic	chr12	-	1157	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-13	2678	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	7	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	NA	False	NA	-14	True	NA	NA	NA	132956319	132942119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132956242
transcript_37027.nnic	chr12	-	1288	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	211	2596	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	1.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	244	False	NA	-27	True	AATAAA	-25	NA	132956051	132942201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132955761
transcript_37029.nnic	chr12	-	1075	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-13	2596	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	7	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	NA	False	NA	-27	True	AATAAA	-25	NA	132956319	132942201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132956242
transcript_3703.known	chr1	-	2147	8	FSM	ENSG00000163875.16	ENST00000373075.6	2147	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	178.552913325834	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-1	True	NA	-5	True	AATAAA	-18	NA	37514763	37492574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37494108_37495884_37495919_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_37034.known	chr12	+	17697	4	FSM	ENSG00000198393.8	ENST00000328654.10	17697	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	12.3648246606609	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACTGCTCTCTCATTAT	1	True	NA	NA	False	ATTAAA	-16	NA	132986366	133027102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132986874_133007041_133007169_133007436_133007533_133010135
transcript_3704.known	chr1	-	1408	8	FSM	ENSG00000163875.16	ENST00000475828.5	1408	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	151.013176881479	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATTTCACAGGCTT	6	True	NA	-49	True	TTTAAA	-37	NA	37514756	37493334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_37040.nnic	chr12	+	627	5	NNC	ENSG00000198040.11	novel	6811	5	NA	NA	-10	-2242	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_4	92.3481862301583	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTCAATGAATC	89	False	NA	NA	False	ATTAAA	-24	NA	133037468	133054760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133054638
transcript_37041.known	chr12	+	6811	5	FSM	ENSG00000198040.11	ENST00000539354.6	6811	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	58.1592640943814	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCAAGTTGTGTTTG	5	True	NA	14	True	AATAAA	-18	NA	133037508	133063299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_37042.nnic	chr12	+	805	5	NNC	ENSG00000198040.11	novel	6811	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	99.5766036777716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCAAGTTGTGTTTG	89	False	NA	14	True	AATAAA	-18	NA	133037468	133063299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133062999
transcript_37043.nic	chr12	+	731	5	NIC	ENSG00000198040.11	novel	6811	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	99.9284118757023	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTTGTGTTTGTTACA	89	False	NA	19	True	AATAAA	-23	NA	133037468	133063304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133063078
transcript_37044.known	chr12	+	3501	5	FSM	ENSG00000198040.11	ENST00000543758.5	3501	5	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_4	115.024725602802	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTAGTGGTATTTGTGG	11	True	NA	20	True	AATAAA	-25	NA	133037300	133059606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133037546_133041099_133041483_133047954_133048082_133048752_133048849_133056956
transcript_37046.known	chr12	+	637	3	FSM	ENSG00000198040.11	ENST00000539686.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	115.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCACATCTTATACCA	21	True	NA	NA	False	NA	NA	NA	133037524	133048356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133037555_133041277_133041483_133047954
transcript_37048.known	chr12	+	562	4	FSM	ENSG00000198040.11	ENST00000543310.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	105.188719293785	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTGAGTGTATGAGAAC	1027	False	NA	NA	False	NA	NA	NA	133038874	133048844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133039013_133041277_133041483_133047954_133048082_133048752
transcript_37049.known	chr12	+	647	4	FSM	ENSG00000198040.11	ENST00000535439.2	647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	112.458387365678	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTTGTGTTTGTTACA	3437	False	NA	19	True	AATAAA	-23	NA	133041284	133063304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133041483_133047954_133048082_133048752_133048849_133063078
transcript_3705.known	chr1	-	2005	6	FSM	ENSG00000163875.16	ENST00000373074.5	2005	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_4	23.3358093924338	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATGCTTTACTTTTAA	493	False	NA	-25	True	AATAAA	-18	NA	37514269	37493310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422
transcript_37051.known	chr12	+	726	6	FSM	ENSG00000196387.10	ENST00000356456.9	726	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	58.9562549692567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAGGCTGGAAATGC	37	False	NA	NA	False	NA	NA	NA	133080473	133105626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133080552_133080821_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_37058.known	chr12	+	553	4	FSM	ENSG00000196387.10	ENST00000412146.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	53.6739125543209	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAGGATCATACTGAG	438	False	NA	NA	False	TTTAAA	-11	NA	133080874	133105641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133081073_133083102_133083230_133083465_133083562_133105509
transcript_3706.known	chr1	-	814	4	FSM	ENSG00000163875.16	ENST00000485039.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_2	29.4882274061286	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGATCTTTGCCTACTC	1242	False	NA	NA	False	GATAAA	-15	NA	37513520	37501414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37501997_37509277_37509324_37509454_37509543_37513422
transcript_37062.known	chr12	-	2054	4	FSM	ENSG00000214029.6	ENST00000650709.1	2054	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCACATATTCCTGG	-9	True	NA	NA	False	AATAAA	-17	NA	133130273	133106829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_133106960_133120287_133122025_133128327_133128468_133130226
transcript_37064.known	chr12	-	17294	2	FSM	ENSG00000214029.6	ENST00000537226.3	17294	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGACAAATATAAGC	-10	True	NA	-4	True	AATAAA	-17	NA	133130274	133104778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_133122025_133130226
transcript_37066.known	chr12	+	2349	5	FSM	ENSG00000196387.10	ENST00000355557.7	2349	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	36.1481327318577	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	5	True	NA	66	True	AATAAA	-20	NA	133080922	133107428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_37067.known	chr12	+	2328	6	FSM	ENSG00000196387.10	ENST00000536790.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	41.5133713398466	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	93	False	NA	66	True	AATAAA	-20	NA	133081010	133107428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133100986_133101054_133105509
transcript_37068.known	chr12	+	2340	4	FSM	ENSG00000196387.10	ENST00000544426.5	2340	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.0446427703785	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACATAACAAAGTGTTT	445	False	NA	NA	False	AATAAA	-25	NA	133080881	133107526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133081073_133081272_133081330_133083486_133083562_133105509
transcript_3707.known	chr1	-	4554	4	FSM	ENSG00000163877.11	ENST00000296215.8	4554	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	9.28559218478941	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	-3	True	NA	0	True	ATTAAA	-22	NA	37554293	37534448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37538013_37540156_37540756_37552644_37552748_37554005
transcript_37071.known	chr12	+	3773	7	FSM	ENSG00000090612.22	ENST00000541009.6	3773	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	19.238993967692	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGTTATTATATCTT	18	False	NA	68	True	NA	NA	NA	133181558	133205173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_37080.nic	chr12	+	769	6	NIC	ENSG00000256223.6	novel	2169	5	NA	NA	0	-351	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	9.15204895091804	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGATCTCTGGTATTTG	5109	False	NA	5	True	ATTAAA	-17	NA	133130574	133155598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133130755_133130836_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_37081.nic	chr12	+	2139	6	NIC	ENSG00000256223.6	novel	2169	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	24	junction_1	9.15204895091804	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	5109	False	NA	-16	True	NA	NA	NA	133130574	133156968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133130755_133130836_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_37084.known	chr12	+	13390	6	FSM	ENSG00000090612.22	ENST00000536435.7	13390	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	25.7402408691139	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCACCAGGGTCAGCC	-13	True	NA	NA	False	AATAAA	-19	NA	133181494	133214832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133202143
transcript_37086.known	chr12	+	686	6	FSM	ENSG00000090612.22	ENST00000592241.5	686	6	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	39.9479661559885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCCTAATGGGTTTC	79	False	NA	NA	False	AATATA	-26	NA	133181619	133202348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181687_133181945_133182031_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_37087.known	chr12	+	717	6	FSM	ENSG00000090612.22	ENST00000500625.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	47.5167338944924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAATGCACTACATTTG	-5	True	NA	NA	False	AATAAA	-27	NA	133181502	133202219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181628_133181945_133182031_133187864_133188073_133191488_133191616_133191907_133192004_133202143
transcript_37088.known	chr12	+	4406	5	FSM	ENSG00000256223.6	ENST00000248211.11	4406	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.9126280564072	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAGATTTGTCAAAAT	-8	True	NA	15	True	AATAAA	-26	NA	133130626	133159465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133130755_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_37090.known	chr12	+	861	4	FSM	ENSG00000090612.22	ENST00000542711.6	861	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	41.7372735094184	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATCAGAGAATTCATACA	3	True	NA	NA	False	AGTAAA	-14	NA	133181510	133202647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181687_133181945_133182031_133191907_133192004_133202143
transcript_37091.nnic	chr12	+	1391	3	NIC	ENSG00000256223.6	novel	546	4	NA	NA	0	-4735	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	12	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGCAGTGGCTCACA	5109	False	NA	NA	False	NA	NA	NA	133130574	133140231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133130755_133130836_133131015_133139198
transcript_37093.known	chr12	+	2169	5	FSM	ENSG00000256223.6	ENST00000426665.6	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	7.3143694191639	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	-8	True	NA	-16	True	NA	NA	NA	133130626	133156968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_37094.known	chr13	-	1521	5	FSM	ENSG00000198033.12	ENST00000400113.8	1521	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTGTGTATCGTACTG	21	False	19181845	NA	False	ATTAAA	-19	NA	19181824	19173771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19174160_19176926_19177608_19178245_19178395_19179340_19179564_19181744
transcript_37095.known	chr13	+	4239	14	FSM	ENSG00000196199.14	ENST00000361479.10	4239	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	18.4493549541672	1766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCCTTTTATATC	-13	True	NA	13	True	AATAAA	-14	NA	19633658	19673441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19671205_19671290_19671833
transcript_371.known	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_2	5534.5	8676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_8586_10858_10992_11133
transcript_37103.known	chr13	-	1709	8	FSM	ENSG00000121390.19	ENST00000492741.5	1709	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	148.316952393673	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGTGTGGTGGTCTTG	2	True	NA	-2	True	ATTAAA	-17	NA	19782942	19675387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19675654_19677723_19677824_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385
transcript_37104.known	chr13	-	422	4	FSM	ENSG00000121390.19	ENST00000635562.1	422	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	13.490737563232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTTTTATTTGTAAA	9545	False	NA	-43	True	NA	NA	NA	19730316	19675428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19675654_19677723_19677824_19699379_19699399_19730238
transcript_37105.known	chr13	-	3283	8	FSM	ENSG00000132950.19	ENST00000337963.9	3283	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	25.5494718184952	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-2	True	NA	NA	False	ATTAAA	-21	NA	19863649	19823481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_3711.known	chr1	-	2350	16	FSM	ENSG00000134697.13	ENST00000373062.8	2350	16	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	38.8766710966301	1973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAAATTGTGTTTTCTT	3	True	NA	-39	True	ATTAAA	-18	NA	37595937	37566815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37567008_37567672_37567765_37568274_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_37115.known	chr13	-	1382	6	FSM	ENSG00000132950.19	ENST00000382905.8	1382	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	22.7367543857957	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-3	True	NA	-11	True	AATAAA	-17	NA	19863524	19837464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_37126.nnic	chr13	-	1876	5	NIC	ENSG00000132950.19	novel	1382	6	NA	NA	2	427	combination_of_known_splicesites	FALSE	canonical	2	8	junction_4	25.0898385805888	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAAACAACATACCCAT	0	True	NA	NA	False	AAAAAG	-17	NA	19863647	19837025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19863449
transcript_37129.known	chr13	-	1622	5	FSM	ENSG00000132950.19	ENST00000467542.5	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	25.3118055460293	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-3	True	NA	-11	True	AATAAA	-17	NA	19863524	19837464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19837822_19838699_19838986_19851354_19852191_19862398_19862467_19863449
transcript_37133.known	chr13	-	1092	5	FSM	ENSG00000132950.19	ENST00000382907.8	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	30.2985148150862	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTTCTATGGAATTG	139	False	NA	1	True	AATAAA	-29	NA	19863508	19837452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19837822_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_37145.nic	chr13	-	1189	3	ISM	ENSG00000132950.19	ENST00000467542.5	1622	5	-123	13803	2	-13803	5prime_fragment	FALSE	canonical	3	89	junction_2	7	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGCTTTGCTTTTTT	0	True	NA	NA	False	AGTAAA	-23	NA	19863647	19851267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_19852191_19862398_19862467_19863449
transcript_37147.known	chr13	+	5051	26	FSM	ENSG00000121741.17	ENST00000382871.3	5051	26	0	0	0	0	multi-exon	FALSE	canonical	2	88	junction_2	108.496222975733	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATGTATGTATGTGT	14	False	NA	15	True	AATAAA	-19	NA	19958782	20086746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_37149.known	chr13	+	7429	25	FSM	ENSG00000121741.17	ENST00000610343.5	7429	25	0	0	0	0	multi-exon	FALSE	canonical	2	270	junction_10	73.199771838594	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGGATTTCCCCCTT	-4	True	NA	NA	False	AATAAA	-16	NA	19958726	20089115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_19958842_19959957_19960027_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_37153.nnic	chr13	+	1677	9	NNC	ENSG00000121741.17	novel	1912	8	NA	NA	-4	2822	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	106.272938700311	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTGTTTGAGTTTTAT	-12	True	NA	NA	False	AATAAA	-14	NA	19958672	20022785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20022679
transcript_37156.known	chr13	+	1912	8	FSM	ENSG00000121741.17	ENST00000382881.7	1912	8	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	47.646658661785	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	-8	True	NA	NA	False	TATAAA	-42	NA	19958676	20019963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_37167.nic	chr13	+	561	4	ISM	ENSG00000121741.17	ENST00000382871.3	5051	26	-110	93408	-4	-9754	5prime_fragment	FALSE	canonical	3	88	junction_2	104.183598623882	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGAACTACAAGGAAATG	-12	True	NA	NA	False	NA	NA	NA	19958672	19993338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062
transcript_37170.nic	chr13	+	826	3	ISM	ENSG00000121741.17	ENST00000382871.3	5051	26	-110	116134	-4	-32480	5prime_fragment	FALSE	canonical	3	88	junction_2	111	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGGCATCCTC	-12	True	NA	NA	False	NA	NA	NA	19958672	19970612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_19958842_19959957_19960027_19970024
transcript_37174.nnic	chr13	+	783	3	NNC	ENSG00000121741.17	novel	5051	26	NA	NA	51	-32480	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	26	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGGGCATCCTC	65	False	NA	NA	False	NA	NA	NA	19958833	19970612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_19958960_19959957_19960027_19970024
transcript_37176.known	chr13	-	1483	8	FSM	ENSG00000165475.15	ENST00000298248.12	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	3.36852174930046	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTCTCTTTTGGTTT	-22	True	NA	-1	True	AATAAA	-21	NA	20525857	20403668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20439592_20439755_20489369_20489497_20512442_20512551_20525753
transcript_37177.known	chr13	-	1331	7	FSM	ENSG00000165475.15	ENST00000644593.1	1331	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.94694069321861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCTTTTGGTTTTT	-30	True	NA	1	True	AATAAA	-23	NA	20525865	20403666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20489369_20489497_20512442_20512551_20525753
transcript_37182.nnic	chr13	+	1137	2	Antisense	novelGene_ENSG00000165475.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATGAGACAAAAAGTTGC	NA	False	NA	NA	False	AATAAA	-13	NA	20413320	20427714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_20413508_20426764
transcript_37188.known	chr13	+	3091	28	FSM	ENSG00000032742.18	ENST00000319980.10	3091	28	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	18.0366187494277	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGTACATATATGTGTAT	-33	True	NA	87	True	AATAAA	-14	NA	20567137	20691437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_20567257_20567669_20567786_20567884_20567998_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_37189.nic	chr13	+	2707	27	NIC	ENSG00000032742.18	novel	3091	28	NA	NA	-20	-73	combination_of_known_junctions	TRUE	canonical	2	28	junction_12	13.6443086949583	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTAGGCCAGTGACTTC	-3	True	NA	14	True	AATAAA	-16	NA	20567117	20691364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601749_20601850_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_37192.known	chr13	+	2850	26	FSM	ENSG00000032742.18	ENST00000351808.10	2850	26	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_14	12.9122577421611	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGTGTATGTAGTCA	-14	True	NA	94	True	AATAAA	-21	NA	20567156	20691444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_372.known	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1086	junction_3	5009.80165941394	8218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
transcript_37214.nic	chr13	+	543	7	ISM	ENSG00000032742.18	ENST00000351808.10	2850	26	-39	99040	-20	9388	5prime_fragment	FALSE	canonical	3	59	junction_1	9.59890039998795	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAAGTCCTTATGTTG	-3	True	NA	NA	False	AAAAAG	-5	NA	20567117	20592404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334
transcript_37216.known	chr13	+	575	4	FSM	ENSG00000032742.18	ENST00000389373.3	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	21.0765799460496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTAAGTGAAAAAAATTT	-5	True	NA	NA	False	NA	NA	NA	20567165	20583016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_20567257_20567669_20567998_20574379_20574476_20582956
transcript_37217.nic	chr13	+	1447	3	ISM	ENSG00000032742.18	ENST00000351808.10	2850	26	-39	107276	-20	1152	5prime_fragment	FALSE	canonical	3	59	junction_1	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATTTGGATAGTAAGGA	-3	True	NA	NA	False	NA	NA	NA	20567117	20584168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_20567257_20574379_20574476_20582956
transcript_37220.known	chr13	-	1054	5	FSM	ENSG00000150456.11	ENST00000382758.6	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	7.17635004720366	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTAGCATCCTAGG	-12	True	NA	NA	False	NA	NA	NA	20773961	20728730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
transcript_37221.nnic	chr13	-	809	4	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_2	22.6421435969889	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	NA	False	NA	-30	True	AATAAA	-15	NA	20773999	20728930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_20729217_20731840_20732122_20757454_20757618_20773920
transcript_37223.nnic	chr13	-	528	3	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	23.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	NA	False	NA	-30	True	AATAAA	-15	NA	20773999	20728930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_20729217_20757454_20757618_20773920
transcript_37238.known	chr13	-	5546	8	FSM	ENSG00000150457.9	ENST00000382592.5	5546	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	8.79471084092651	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTAGTTGGTGTCATGT	-38	True	NA	-6	True	ATTAAA	-15	NA	21061586	20973035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20975365_20979690_20979798_20981465_20981649_20983223_20983807_20987880_20989305_20991271_20991405_21045684_21046231_21061345
transcript_37240.known	chr13	-	400	1	FSM	ENSG00000180172.7	ENST00000419579.2	400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	NA	False	NA	NA	False	AAGAAA	-4	NA	21094714	21094314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21094300_21094700
transcript_3725.known	chr1	-	539	2	FSM	ENSG00000134697.13	ENST00000488496.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAAATATGGCCAGATA	5	True	NA	NA	False	ATTAAA	-6	NA	37595935	37593484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37593847_37595758
transcript_3726.known	chr1	+	2628	6	FSM	ENSG00000163879.11	ENST00000652629.1	2628	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	14.4858551697855	1357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTCTGAATTTTT	-2	True	NA	20	True	AATAAA	-17	NA	37556939	37566857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_37557076_37557602_37557749_37559326_37559497_37561556_37561736_37562080_37562246_37565025
transcript_37265.known	chr13	+	670	3	FSM	ENSG00000150459.12	ENST00000467636.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1462	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTGTGAAAGTTAATG	300	False	NA	15	True	AATATA	-14	NA	21140885	21147603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21140996_21146804_21146928_21147166
transcript_37266.known	chr13	+	405	3	FSM	ENSG00000150459.12	ENST00000492245.5	405	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1556	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTGCCATTAAGCCT	29	False	NA	71	True	AATAAA	-20	NA	21140614	21147413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21140682_21140885_21140996_21147185
transcript_3727.known	chr1	-	422	3	FSM	ENSG00000134697.13	ENST00000479255.1	422	3	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	22.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAGTTAGAAATTGTGTT	536	False	NA	-44	True	ATTAAA	-13	NA	37568417	37566820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37567008_37567672_37567765_37568274
transcript_37272.known	chr13	-	2803	8	FSM	ENSG00000165480.16	ENST00000298260.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_7	134.502105286611	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	10	True	NA	-1	True	AATAAA	-19	NA	21176548	21153594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21176374
transcript_37294.nic	chr13	-	992	4	ISM	ENSG00000165480.16	ENST00000465471.5	930	5	-38	6088	-37	344	5prime_fragment	FALSE	canonical	3	71	junction_3	234.279510177243	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAGATATTTATTTAT	-31	True	NA	4	True	AATAAA	-28	NA	21176589	21167877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176347
transcript_37297.known	chr13	-	750	3	FSM	ENSG00000165480.16	ENST00000462482.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	171.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGCTGTTTGCAAAC	7	True	NA	NA	False	NA	NA	NA	21176551	21154696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21155151_21155692_21155812_21176374
transcript_37310.known	chr13	-	2869	9	FSM	ENSG00000165480.16	ENST00000314759.6	2869	9	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	88.5549793913363	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	6	True	NA	-1	True	AATAAA	-19	NA	21176552	21153594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_37311.known	chr13	-	2745	8	FSM	ENSG00000165480.16	ENST00000400018.7	2745	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	161.696112053015	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	11	True	NA	-1	True	AATAAA	-19	NA	21176547	21153594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21155151_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_37312.known	chr13	-	930	5	FSM	ENSG00000165480.16	ENST00000465471.5	930	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	202.935180538023	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAAGAATCAAGTT	7	True	NA	NA	False	AAAAAG	-3	NA	21176551	21161789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176347
transcript_37317.known	chr13	+	2233	2	FSM	ENSG00000173141.5	ENST00000309594.5	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	1550	junction_1	0	3152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTCTAAATACAT	-15	True	NA	6	True	AATAAA	-13	NA	21176657	21179084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21176718_21176911
transcript_37321.known	chr13	+	347	3	FSM	ENSG00000233325.4	ENST00000424756.2	1310	3	0	963	0	-963	multi-exon	FALSE	canonical	3	6	junction_1	5.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGATCAAAAATATCTG	-22	True	NA	NA	False	NA	NA	NA	21298138	21304555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21298197_21301418_21301619_21304466
transcript_37324.nnic	chr13	-	2168	2	NNC	ENSG00000180776.16	novel	5355	13	NA	NA	5995	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCTTTGTTATAAAG	NA	False	NA	-6	True	AATAAA	-19	NA	21375460	21372570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_21374335_21375056
transcript_37325.known	chr13	-	3343	4	FSM	ENSG00000180776.16	ENST00000626464.2	3343	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.84573486395988	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAAGTGTTTTCTTTGTT	NA	False	NA	-12	True	AATAAA	-13	NA	21381455	21372576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21374271_21375106_21376656_21378660_21378739_21381433
transcript_37327.known	chr13	-	1885	12	FSM	ENSG00000165487.14	ENST00000382374.9	1885	12	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_4	33.7462578274299	538	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGGTGCTTTTTATTT	-8	True	NA	NA	False	AATAAA	-23	NA	21604170	21492690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_37328.known	chr13	-	603	1	FSM	ENSG00000226525.5	ENST00000464254.1	603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1926	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATTCACACACAT	44	False	NA	NA	False	NA	NA	NA	21629015	21628412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21628400_21629000
transcript_37329.known	chr13	-	2042	5	FSM	ENSG00000262619.3	ENST00000577004.2	2042	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.23606797749979	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTAATGGACTCACTG	56	False	NA	NA	False	AATAAA	-36	NA	22916369	22872636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_22873275_22876297_22876475_22894605_22895039_22896360_22896503_22915717
transcript_37334.known	chr13	-	15635	10	FSM	ENSG00000151835.17	ENST00000382292.9	15635	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.13006159296628	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGTAATGGGTGTTTCC	2	True	NA	-7	True	AATAAA	-20	NA	23433702	23328829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
transcript_37337.known	chr13	-	2711	6	FSM	ENSG00000151835.17	ENST00000682244.1	2711	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	8.64869932417586	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCAAGTGGGCAGATC	18	True	NA	NA	False	NA	NA	NA	23433686	23363484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
transcript_37339.nnic	chr13	-	1758	3	NNC	ENSG00000151835.17	novel	2500	2	NA	NA	5	-438	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTAACTTTGCGTGT	NA	False	NA	NA	False	AATAAA	-23	NA	23433758	23409827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_23411353_23411651_23411741_23433614
transcript_3734.known	chr1	-	2696	5	FSM	ENSG00000116922.15	ENST00000486637.2	2696	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	92.393181566607	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-14	True	NA	-1	True	AATAAA	-13	NA	37690529	37681569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
transcript_37340.known	chr13	-	2500	2	FSM	ENSG00000151835.17	ENST00000683638.1	2500	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACACCATGTTTAAAAA	NA	False	NA	NA	False	NA	NA	NA	23433763	23409389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_23411741_23433614
transcript_37342.known	chr13	-	513	2	FSM	ENSG00000151835.17	ENST00000476776.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTAAAAGTTTTCTGT	NA	False	NA	-15	True	AATAAA	-20	NA	23354890	23353735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_23353877_23354518
transcript_37344.known	chr13	+	4151	10	FSM	ENSG00000127863.16	ENST00000382263.3	4151	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	3.12694383988229	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGTTCAGTGAGAGA	-2	True	NA	9	True	AATAAA	-21	NA	23579379	23676093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_23579530_23590149_23590253_23593344_23593456_23615866_23616046_23626706_23626793_23659049_23659215_23660364_23660491_23667979_23668083_23668691_23669098_23673371
transcript_37347.known	chr13	-	2381	19	FSM	ENSG00000027001.10	ENST00000382172.4	2381	19	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_12	23.1095752694809	470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTTTTCACCTGTTT	22	True	NA	-23	True	AATAAA	-17	NA	23889400	23730188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23889131
transcript_3735.known	chr1	-	919	5	FSM	ENSG00000116922.15	ENST00000464085.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	95.3136270425169	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAGACCACGGGTAC	11	True	NA	NA	False	NA	NA	NA	37690504	37683110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690215
transcript_37352.known	chr13	+	852	4	FSM	ENSG00000205861.13	ENST00000382133.9	852	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.32049379893857	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGTGAACAACTTTGG	NA	False	NA	8	True	AATAAA	-20	NA	23888841	23892104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_23889012_23889999_23890043_23891384_23891532_23891612
transcript_37355.nic	chr13	+	950	4	NIC	ENSG00000182957.16	novel	6665	12	NA	NA	-29	41	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	20.5318181259127	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTTGAAGGCAAGTTCA	NA	False	NA	NA	False	AATATA	-26	NA	24160690	24278810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_24160933_24249476_24249843_24251717_24251863_24278613
transcript_3736.known	chr1	-	2355	5	FSM	ENSG00000116922.15	ENST00000358011.8	2355	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	110.005681671448	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-5	True	NA	-1	True	AATAAA	-13	NA	37690520	37681569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690333
transcript_37364.known	chr13	-	5437	34	FSM	ENSG00000102699.6	ENST00000381989.4	5437	34	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_27	28.4013282323683	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTTCTGTGTCTCA	-12	True	NA	-5	True	AATAAA	-16	NA	24512778	24420930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24421315_24426465_24426599_24431376_24431477_24434394_24435475_24441845_24441969_24442589_24442686_24443649_24443731_24446680_24446762_24447015_24447187_24449717_24449818_24452405_24452594_24453586_24453655_24455016_24455213_24456340_24456479_24459043_24459123_24459263_24459311_24459971_24460137_24469023_24469111_24469893_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
transcript_37365.nic	chr13	-	628	4	ISM	ENSG00000102699.6	ENST00000381989.4	5437	34	-62	79294	-62	-43828	5prime_fragment	FALSE	canonical	3	281	junction_3	7.48331477354788	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTATTTTAATTTA	NA	False	NA	NA	False	ATTAAA	-15	NA	24512840	24500224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_24500383_24501632_24501835_24503644_24503778_24512705
transcript_37369.known	chr13	-	5082	17	FSM	ENSG00000151849.16	ENST00000381884.9	5082	17	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_15	19.5560093066045	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTACAGATGTATCTA	-19	True	NA	NA	False	AATAAA	-14	NA	24922861	24882278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_3737.nic	chr1	-	2739	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	99.497173326683	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	1683	False	NA	-1	True	AATAAA	-13	NA	37690569	37681569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690001
transcript_37371.known	chr13	-	5020	16	FSM	ENSG00000151849.16	ENST00000616936.4	5020	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	42.0949191972407	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATATAAGTACAGATGT	-47	True	NA	NA	False	AATAAA	-9	NA	24922889	24882283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_37373.nic	chr13	-	1001	3	ISM	ENSG00000151849.16	ENST00000545981.6	4298	18	-79	28545	0	-22538	5prime_fragment	FALSE	canonical	3	119	junction_1	14.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGCTGGGTGTGGTG	-47	True	NA	NA	False	ATTAAA	-10	NA	24922889	24911707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_24912070_24912581_24913092_24922760
transcript_37375.nnic	chr13	-	628	2	NNC	ENSG00000151849.16	novel	5082	17	NA	NA	-31	-32907	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTTGATGAGTTTGAC	NA	False	NA	NA	False	AATAAA	-22	NA	24922920	24922076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_24922545_24922760
transcript_37391.nnic	chr13	-	649	4	FSM	ENSG00000253771.7	ENST00000692136.1	641	4	-11	3	-11	0	multi-exon	FALSE	canonical	2	2	junction_2	13.2245562832516	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTTAGTCTAATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	24968516	24924676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24924876_24925847_24925895_24951396_24951489_24968205
transcript_37393.nic	chr13	-	800	4	FSM	ENSG00000253771.7	ENST00000687945.1	768	4	-32	0	-11	0	multi-exon	FALSE	canonical	3	22	junction_2	3.68178700572909	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGATCTTTGACA	NA	False	NA	0	True	AGTAAA	-20	NA	24968516	24941801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24942109_24942931_24943022_24951396_24951489_24968205
transcript_37394.nic	chr13	-	628	4	FSM	ENSG00000253771.7	ENST00000687945.1	768	4	-32	172	-11	-172	multi-exon	FALSE	canonical	3	22	junction_2	3.68178700572909	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGCTAATTTTTGTAT	NA	False	NA	NA	False	NA	NA	NA	24968516	24941973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24942109_24942931_24943022_24951396_24951489_24968205
transcript_37397.nnic	chr13	-	710	3	NIC	ENSG00000253771.7	novel	768	4	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	13	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGATCTTTGACA	NA	False	NA	0	True	AGTAAA	-20	NA	24968516	24941801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_24942109_24951396_24951489_24968205
transcript_3740.nic	chr1	-	2428	5	NIC	ENSG00000116922.15	novel	2696	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	102.218821652375	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-12	True	NA	-1	True	AATAAA	-13	NA	37690527	37681569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_37683161_37683318_37683438_37686272_37686453_37689657_37689884_37690215
transcript_37400.known	chr13	-	349	1	FSM	ENSG00000232858.1	ENST00000428810.1	349	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAAAACGAAACTTT	27	False	NA	NA	False	NA	NA	NA	24988925	24988576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24988600_24988900
transcript_37401.known	chr13	-	5117	14	FSM	ENSG00000139505.12	ENST00000381801.6	5117	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	12.3028836760152	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTTCTAGGAAAGTAAA	-26	True	NA	NA	False	AATAAA	-20	NA	25287488	25246221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_25249493_25251648_25251776_25251852_25251985_25253763_25253965_25254384_25254435_25257195_25257322_25257735_25257846_25258559_25258693_25261667_25261803_25265818_25265948_25266128_25266287_25267778_25267942_25274070_25274188_25287223
transcript_37403.nic	chr13	-	932	2	ISM	ENSG00000139505.12	ENST00000381801.6	5117	14	-5	27304	-5	-14905	5prime_fragment	FALSE	canonical	3	87	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTGTTCCTTTTAATT	-31	True	NA	NA	False	NA	NA	NA	25287493	25273525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_25274188_25287223
transcript_37404.known	chr13	+	4236	16	FSM	ENSG00000139496.16	ENST00000381736.8	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	22.9720603245672	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	-6	True	NA	32	True	AATAAA	-29	NA	25301624	25342421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_37407.known	chr13	+	2489	15	FSM	ENSG00000139496.16	ENST00000381718.7	2489	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	47.5076792933178	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCAGCCTGACATGGT	2	True	NA	NA	False	NA	NA	NA	25301632	25340718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_25301881_25307805_25307949_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_37408.known	chr13	+	582	3	FSM	ENSG00000139496.16	ENST00000460326.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTCAGTATTTGAGTA	-6	True	NA	NA	False	AAAAAG	-30	NA	25301624	25309429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_25301881_25307805_25307949_25309246
transcript_37410.nic	chr13	+	467	2	ISM	ENSG00000139496.16	ENST00000490231.5	563	5	-73	9717	-4	-4710	5prime_fragment	FALSE	canonical	0	0	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACCATAGTCTGCAAGGT	-4	True	NA	NA	False	AAAAAG	-10	NA	25301551	25303239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_25301881_25303101
transcript_37411.known	chr13	+	8756	36	FSM	ENSG00000132932.19	ENST00000684424.1	8756	36	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_17	3.35808497418954	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAACAAAAAAAAAAAAAAA	-12	True	NA	NA	False	AATAAA	-9	NA	25468837	26025111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_25469122_25529998_25530099_25530561_25530661_25532271_25532318_25533272_25533314_25537987_25538062_25540318_25540389_25541918_25542047_25543290_25543403_25551337_25551504_25553792_25553921_25554990_25555069_25558972_25559062_25559720_25559766_25563955_25564032_25570766_25570873_25571609_25571693_25574807_25574858_25577068_25577139_25578814_25578900_25579807_25579948_25581818_25581958_25589634_25589700_25699172_25699346_25769045_25769230_25774848_25774960_25828117_25828193_25837162_25837286_25839545_25839625_25860194_25860257_25860803_25860861_25862300_25862409_25961574_25961664_25968574_25968680_26012530_26012623_26019887
transcript_37412.nnic	chr13	+	894	3	NNC	ENSG00000132932.19	novel	7867	2	NA	NA	-32494	83	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAACATCAGTACTAG	NA	False	NA	18	True	ATTAAA	-19	NA	25977476	26020289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_25977877_26012530_26012623_26019887
transcript_37413.nnic	chr13	+	851	3	NNC	ENSG00000132932.19	novel	7867	2	NA	NA	-30302	83	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAACATCAGTACTAG	NA	False	NA	18	True	ATTAAA	-19	NA	25979668	26020289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_25980026_26012530_26012623_26019887
transcript_37419.nnic	chr13	-	309	3	FSM	ENSG00000289125.1	ENST00000692041.1	310	3	-3	4	-3	-4	multi-exon	FALSE	canonical	0	0	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGATGGAGTCTCACTCT	NA	False	NA	NA	False	AATAAA	-17	NA	25977507	25975583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_25975750_25976546_25976618_25977435
transcript_37423.known	chr13	-	3845	2	FSM	ENSG00000180730.5	ENST00000319420.4	3845	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGCGGAGTTGGGTTT	0	True	NA	-33	True	AATAAA	-17	NA	26052016	26044596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26047067_26050641
transcript_37425.known	chr13	-	1105	6	FSM	ENSG00000127870.17	ENST00000468480.5	1105	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.8526476364551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAAAGTGTATGGCAGT	29	True	NA	NA	False	ATTAAA	-21	NA	26222261	26132114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26132452_26215473_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_37426.nnic	chr13	-	2816	6	NNC	ENSG00000127870.17	novel	3520	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	44.5421149026402	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-24	True	NA	-20	True	AATAAA	-13	NA	26222314	26212774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_26214770_26215473_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_37427.known	chr13	-	3398	5	FSM	ENSG00000127870.17	ENST00000381570.7	3398	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	46.6744041204599	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	587	False	NA	-20	True	AATAAA	-13	NA	26221703	26212774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221513
transcript_37428.known	chr13	-	3282	5	FSM	ENSG00000127870.17	ENST00000346166.7	3282	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	37.5666075125237	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTTTTCTGTTGTTCC	-15	True	NA	-7	True	AATAAA	-26	NA	26221842	26212761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221781
transcript_3743.known	chr1	-	649	2	FSM	ENSG00000116922.15	ENST00000491797.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGAAGGTGTTTTTCTC	2	True	NA	NA	False	TTTAAA	-30	NA	37690513	37689532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37689884_37690215
transcript_37430.known	chr13	-	3520	5	FSM	ENSG00000127870.17	ENST00000381588.9	3520	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	31.4990079208854	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-24	True	NA	-20	True	AATAAA	-13	NA	26222314	26212774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_37437.known	chr13	+	4857	10	FSM	ENSG00000132970.14	ENST00000335327.6	4857	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	27.3405591171707	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTGTATGTTTGGCTT	-23	True	NA	29	True	AATAAA	-40	NA	26557682	26688948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_26557820_26612960_26613059_26642260_26642404_26665027_26665163_26667516_26667671_26671871_26671990_26676548_26676725_26681053_26681321_26682606_26682975_26685687
transcript_37439.known	chr13	-	349	2	FSM	ENSG00000152484.14	ENST00000620323.1	349	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGGCTAATTATTTT	110	False	NA	2	True	ATTAAA	-29	NA	27171701	27170090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27170330_27171591
transcript_3744.known	chr1	-	763	3	FSM	ENSG00000116922.15	ENST00000461359.5	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	46.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTTGCACACATTTC	-5	True	NA	NA	False	NA	NA	NA	37690520	37686272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37686453_37689605_37689884_37690215
transcript_37442.known	chr13	+	681	6	FSM	ENSG00000122026.11	ENST00000461690.5	681	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	7451.27270739704	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGACATGAGGTAGCT	5	True	NA	71	True	NA	NA	NA	27251560	27256691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255350_27256183_27256335_27256435
transcript_37444.known	chr13	+	616	6	FSM	ENSG00000122026.11	ENST00000272274.8	616	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	7519.19576550578	5617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	-8	True	NA	6	True	AATAAA	-21	NA	27251578	27256568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27251657_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_37445.known	chr13	+	806	6	FSM	ENSG00000122026.11	ENST00000319826.8	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	7595.34836594083	2518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	-4	True	NA	6	True	AATAAA	-21	NA	27251582	27256568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_37447.known	chr13	+	641	6	FSM	ENSG00000122026.11	ENST00000326092.8	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	7577.80491699278	3162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	10	True	NA	6	True	AATAAA	-21	NA	27251596	27256568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_3745.known	chr1	+	2303	11	FSM	ENSG00000134690.11	ENST00000327331.2	2303	11	0	0	0	0	multi-exon	TRUE	canonical	3	170	junction_1	83.9321154266947	2651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATCACTGTTCATCCT	-2	True	NA	32	True	AATAAA	-21	NA	37692480	37709713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_37692579_37692675_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_37465.known	chr13	+	453	4	FSM	ENSG00000122026.11	ENST00000483765.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	8808.34367076025	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACCTCTGGGCTACAA	14	False	NA	-17	True	NA	NA	NA	27253764	27256545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27253844_27255241_27255355_27256183_27256335_27256435
transcript_37466.known	chr13	+	675	3	FSM	ENSG00000122026.11	ENST00000485756.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	18852	junction_1	63	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCTCTGGGCTACAAAAA	1193	False	NA	-14	True	AATAAA	-1	NA	27254943	27256548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27255355_27256183_27256335_27256435
transcript_37467.known	chr13	+	2542	4	FSM	ENSG00000122035.7	ENST00000241463.5	2542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCACATTCTCCTTGTT	4	True	NA	NA	False	AATAAA	-31	NA	27270829	27275192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27271069_27271483_27271541_27271638_27271719_27273026
transcript_37469.known	chr13	+	1443	9	FSM	ENSG00000122034.17	ENST00000381140.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_7	96.3518941173447	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGCCTAGATGAG	-18	True	NA	4	True	ATTAAA	-17	NA	27424618	27435823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_37470.known	chr13	+	1191	8	FSM	ENSG00000122034.17	ENST00000419181.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	301.750471314919	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTCCTTATCATTT	25	True	NA	14	True	ATTAAA	-16	NA	27424661	27435688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_37472.known	chr13	-	1104	7	FSM	ENSG00000122033.15	ENST00000381116.5	1104	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	240.063475402282	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	7	True	NA	-4	True	AATAAA	-23	NA	27450564	27435642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27441016_27441078_27445087_27445138_27449851_27449919_27450508
transcript_3748.known	chr1	+	2371	10	FSM	ENSG00000134690.11	ENST00000373055.6	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_6	29.8812464413533	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCATCCTGCCTGT	-20	True	NA	38	True	AATAAA	-27	NA	37692515	37709719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_37483.known	chr13	-	947	5	FSM	ENSG00000122033.15	ENST00000461838.5	947	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	218.557057767531	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAGTAATTTTAATAAAG	1111	False	NA	-45	True	NA	NA	NA	27450131	27435683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450063
transcript_37491.known	chr13	-	877	4	FSM	ENSG00000122033.15	ENST00000471771.5	877	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	211.288112932712	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAGTAAAGAAGGTACAA	1201	False	NA	NA	False	CATAAA	-37	NA	27450041	27437116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27437274_27439988_27440450_27445087_27445157_27449851
transcript_37492.known	chr13	-	760	4	FSM	ENSG00000122033.15	ENST00000493719.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	195.307165482705	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAGACGTGTCAGAA	4	True	NA	NA	False	CATAAA	-9	NA	27450164	27437144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27437274_27439988_27440450_27445087_27445157_27450063
transcript_37499.known	chr13	-	296	3	FSM	ENSG00000122033.15	ENST00000464753.1	296	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	206.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGCTGAAGACACCCAGAA	-31	True	NA	NA	False	NA	NA	NA	27450199	27440280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27440450_27445087_27445157_27450141
transcript_37501.known	chr13	-	995	5	FSM	ENSG00000122033.15	ENST00000381120.8	995	5	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_4	62.547481963705	2978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	7	True	NA	-4	True	AATAAA	-23	NA	27450564	27435642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450508
transcript_37502.known	chr13	-	785	5	FSM	ENSG00000122033.15	ENST00000460973.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	198.654694130292	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAGAAGGTACAAG	-28	True	NA	NA	False	CATAAA	-38	NA	27450196	27437115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445138_27450141
transcript_37503.known	chr13	-	798	5	FSM	ENSG00000122033.15	ENST00000485650.5	798	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	203.841850462558	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAAATGTAGACGTGT	-20	True	NA	NA	False	CATAAA	-4	NA	27450591	27437149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445157_27450508
transcript_37504.known	chr13	-	373	3	FSM	ENSG00000122033.15	ENST00000484342.2	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	203.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCAGCGAGTTATTCA	-16	True	NA	NA	False	AATAAA	-28	NA	27450587	27440205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27440450_27445087_27445138_27450508
transcript_37506.known	chr13	+	1943	4	FSM	ENSG00000186184.20	ENST00000637071.1	1943	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	139.30541985149	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTATGCATTCTGTAT	10	True	NA	19	True	AATAAA	-15	NA	27621892	27667411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27646193_27646219_27648378_27648454_27665685
transcript_37510.known	chr13	+	1606	3	FSM	ENSG00000186184.20	ENST00000621089.2	1606	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	145	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCTTTCTACATGCT	-7	True	NA	NA	False	NA	NA	NA	27620946	27667022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27621141_27648378_27648454_27665685
transcript_37515.known	chr13	+	668	2	FSM	ENSG00000186184.20	ENST00000399696.3	668	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGACTGGTTTCTGTTCC	71	False	NA	33	True	AATAAA	-22	NA	27621953	27623452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27622840
transcript_37516.known	chr13	+	693	2	FSM	ENSG00000186184.20	ENST00000302979.5	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	0	12458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	9	True	NA	30	True	AATAAA	-19	NA	27621891	27623449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27622874
transcript_37517.known	chr13	+	1723	3	FSM	ENSG00000186184.20	ENST00000489647.4	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	154.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTCAACCTGTATCTA	-13	True	NA	NA	False	AATGAA	-10	NA	27621869	27651549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27648378_27648454_27650041
transcript_37518.known	chr13	+	2118	4	FSM	ENSG00000186184.20	ENST00000465887.2	2118	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	147.585756614775	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	9	True	NA	18	True	AATAAA	-14	NA	27621891	27667410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27648378_27648454_27650041_27650242_27665685
transcript_37519.known	chr13	+	1931	3	FSM	ENSG00000186184.20	ENST00000630983.1	1931	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	160	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	-8	True	NA	18	True	AATAAA	-14	NA	27621874	27667410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27648378_27648450_27665685
transcript_37520.known	chr13	-	1351	1	FSM	ENSG00000261485.1	ENST00000563843.1	1351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTCCTCTCAGTTAA	1021	False	NA	NA	False	ATTAAA	-18	NA	28138193	28136842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_28136800_28138200
transcript_37526.nnic	chr13	-	1111	6	NNC	ENSG00000102755.12	novel	6453	13	NA	NA	65088	-4115	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	73.2049178675859	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGTCTCATATCATCTT	8283	False	NA	-12	True	ATTAAA	-19	NA	28429991	28389681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_28390105_28396959_28397069_28405779_28405895_28427158_28427319_28427751_28427922_28429857
transcript_37529.known	chr13	+	1428	7	FSM	ENSG00000132963.8	ENST00000460403.1	1428	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4024.75662480216	2853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTTGATTAGATAAATT	-35	True	NA	NA	False	ATTAAA	-31	NA	28659103	28678925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_28659188_28659821_28659920_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_37541.known	chr13	+	1338	6	FSM	ENSG00000132963.8	ENST00000380842.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	7301	junction_1	650.754823262955	31101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATGTCTAGAGACT	-9	True	NA	NA	False	GATAAA	-17	NA	28659129	28678959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_28659188_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_37544.known	chr13	-	4317	5	FSM	ENSG00000122042.10	ENST00000380680.5	4317	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	13.7908484148003	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTGTATTTGCCTATT	9	True	NA	0	True	TTTAAA	-18	NA	29850617	29764370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_29767308_29767617_29767696_29772111_29772199_29777154_29777264_29849511
transcript_37546.nnic	chr13	-	2320	11	NNC	ENSG00000102781.14	novel	7618	11	NA	NA	15	440	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_10	5.76194411635517	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTACTGTTAGAGTCTG	-1	True	NA	NA	False	ATTAAA	-14	NA	30307011	30208039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306678
transcript_37549.known	chr13	-	1634	11	FSM	ENSG00000102781.14	ENST00000380617.7	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	5.11957029446808	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAAAACAAGTTT	522	False	NA	-32	True	GATAAA	-19	NA	30307026	30208479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306939
transcript_37550.known	chr13	-	7618	11	FSM	ENSG00000102781.14	ENST00000380615.8	7618	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	4.02492235949962	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTTTCTTTGTGGTTCAT	-3	True	NA	-4	True	AATAAA	-22	NA	30307551	30202629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30307330
transcript_37561.known	chr13	-	566	4	FSM	ENSG00000102781.14	ENST00000414289.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	7.25718035235908	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGACTATAGAGCAAGAGG	0	True	NA	NA	False	NA	NA	NA	30306856	30255479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30255616_30280062_30280224_30283615_30283792_30306763
transcript_37565.known	chr13	-	2319	5	FSM	ENSG00000189403.15	ENST00000339872.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_4	5239.33342014993	3696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTAAATGGCTTTCA	-8	True	NA	-42	True	AATAAA	-24	NA	30464310	30459849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30464160
transcript_37566.known	chr13	-	1282	5	FSM	ENSG00000189403.15	ENST00000399494.5	1282	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5246.2312663473	3647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTATTAGTATTGTT	693	False	NA	-47	True	AGTAAA	-6	NA	30465242	30460906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30465072
transcript_37579.known	chr13	-	821	5	FSM	ENSG00000189403.15	ENST00000326004.4	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4807.76923323073	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAAAAGGGAGTTGTCA	-3	True	NA	NA	False	NA	NA	NA	30465938	30461495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30461689_30462537_30462713_30463206_30463353_30463530_30463695_30465795
transcript_37580.known	chr13	-	503	2	FSM	ENSG00000189403.15	ENST00000468384.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	9973	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCGGACAAGGCCCGTTA	-1	True	NA	2	True	NA	NA	NA	30465914	30463310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30463695_30465795
transcript_37582.known	chr13	+	4894	9	FSM	ENSG00000132952.12	ENST00000255304.9	4894	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	24.2535435555302	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGTTTTTGTGATGA	2	True	NA	NA	False	AATAAA	-28	NA	30617919	30660766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_30618057_30621072_30621240_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_37583.nic	chr13	+	3529	8	NIC	ENSG00000132952.12	novel	4894	9	NA	NA	-18	-1216	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	31.6156768140137	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTTTTGGTTTCATTTT	14	False	NA	3	True	ATTAAA	-16	NA	30617901	30659550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_30618057_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_37584.known	chr13	+	4074	7	FSM	ENSG00000132952.12	ENST00000614860.1	4074	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	54.7654087905861	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTGTGATGATGTA	19	False	NA	NA	False	AATAAA	-32	NA	30617936	30660770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_30618057_30621763_30621893_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_3760.nnic	chr1	-	1554	5	NNC	ENSG00000196449.4	novel	1848	5	NA	NA	498	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	148.694947795814	386	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTCTTTTGAA	9877	False	NA	-10	True	ATTAAA	-16	NA	37807710	37802944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_37803998_37804301_37804445_37806856_37806977_37807100_37807216_37807587
transcript_37602.nnic	chr13	+	714	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.3762239633207	1280	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30863318	30883395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_30863579_30881952_30882005_30882559_30882660_30883093
transcript_3761.nnic	chr1	-	911	5	NNC	ENSG00000196449.4	novel	1848	5	NA	NA	498	-643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	148.694947795814	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGCCTCCTCTCTGGT	9877	False	NA	0	True	ATTAAA	-19	NA	37807710	37803587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_37803998_37804301_37804445_37806856_37806977_37807100_37807216_37807587
transcript_37612.nnic	chr13	+	670	3	FSM	ENSG00000236094.3	ENST00000690833.1	641	3	-58	29	-58	0	multi-exon	FALSE	canonical	3	64	junction_1	50	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30863310	30883395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_30863579_30882559_30882660_30883093
transcript_3762.known	chr1	-	7937	11	FSM	ENSG00000188786.10	ENST00000373036.5	7937	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.02654919008431	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTAGTATCTGTGGCAT	4	True	NA	-6	True	ATTAAA	-35	NA	37859592	37809573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37815567_37817418_37817483_37822120_37822717_37823709_37823813_37832244_37832323_37835078_37835216_37835670_37835745_37838624_37838757_37839919_37840159_37857250_37857710_37859530
transcript_37620.known	chr13	+	411	2	FSM	ENSG00000236094.3	ENST00000440633.1	411	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	NA	False	AATAAA	-18	NA	30882550	30883395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_30882660_30883093
transcript_37624.known	chr13	-	5244	18	FSM	ENSG00000120694.20	ENST00000320027.10	5244	18	0	0	0	0	multi-exon	TRUE	canonical	3	717	junction_9	98.5471274679274	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTGAGTCTACTT	-1	True	NA	51	True	NA	NA	NA	31161904	31134972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_37625.known	chr13	-	3570	18	FSM	ENSG00000120694.20	ENST00000630972.2	3570	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_17	219.165387614075	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	303	False	NA	-14	True	AATAAA	-27	NA	31162388	31136624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161981
transcript_37632.known	chr13	-	3480	17	FSM	ENSG00000120694.20	ENST00000380405.7	3480	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	230.307097969212	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGATTTTGTCACT	764	False	NA	-17	True	AATAAA	-24	NA	31161927	31136627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_37636.nic	chr13	-	2325	14	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-112	5300	23	-1734	5prime_fragment	FALSE	canonical	3	717	junction_5	104.297367312902	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGATGCTAAAAATGCA	-10	True	NA	NA	False	GATAAA	-14	NA	31162016	31140272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_3764.nnic	chr1	-	732	3	NNC	ENSG00000188786.10	novel	7937	11	NA	NA	-22	363	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCCATGTTTCTGGTG	NA	False	NA	NA	False	AATAAA	-18	NA	37859614	37856985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_37857500_37857575_37857710_37859530
transcript_37644.known	chr13	-	812	3	FSM	ENSG00000120694.20	ENST00000435381.5	812	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	454.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	10001	False	NA	-14	True	AATAAA	-27	NA	31138568	31136624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137118_31137367_31137525_31138406
transcript_37649.known	chr13	-	1115	4	FSM	ENSG00000237637.1	ENST00000428419.1	1115	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	32031639	32025313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32026097_32027202_32027254_32027574_32027667_32031450
transcript_3765.nic	chr1	-	1290	2	ISM	ENSG00000188786.10	ENST00000373036.5	7937	11	-22	46930	-22	845	5prime_fragment	FALSE	canonical	3	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGAAATTCAGGCT	NA	False	NA	NA	False	NA	NA	NA	37859614	37856503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_37857710_37859530
transcript_37650.nic	chr13	+	2429	11	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-55	63738	-52	3239	5prime_fragment	FALSE	canonical	3	16	junction_10	6.10245852095694	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTCAGATATAAAAGAAGA	367	False	NA	NA	False	AAAAAG	-8	NA	32315452	32336530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271_32333388_32336264
transcript_37651.nic	chr13	+	2842	11	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-55	63325	-52	3652	5prime_fragment	FALSE	canonical	3	16	junction_10	6.10245852095694	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGAAGAAACTACTTCAA	367	False	NA	NA	False	AAAACA	-26	NA	32315452	32336943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271_32333388_32336264
transcript_37653.nic	chr13	+	1307	10	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-55	67737	-52	-760	5prime_fragment	FALSE	canonical	3	18	junction_1	5.51988548816632	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCATTTGTATCTGAAGT	367	False	NA	NA	False	AAGAAA	-3	NA	32315452	32332531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_37654.nic	chr13	+	1566	10	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-55	67478	-52	-501	5prime_fragment	FALSE	canonical	3	18	junction_1	5.51988548816632	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTTACTTCAGAGAAT	367	False	NA	54	True	AAAAAG	-34	NA	32315452	32332790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_37655.nic	chr13	+	2067	10	ISM	ENSG00000139618.17	ENST00000380152.8	11954	27	-55	66977	-52	0	5prime_fragment	FALSE	canonical	3	18	junction_1	5.51988548816632	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCGAAAGACCAAAAATCA	367	False	NA	NA	False	TATAAA	-11	NA	32315452	32333291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_32315668_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_3766.nic	chr1	-	808	2	ISM	ENSG00000188786.10	ENST00000373036.5	7937	11	-22	47412	-22	363	5prime_fragment	FALSE	canonical	3	6	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCCATGTTTCTGGTG	NA	False	NA	NA	False	AATAAA	-18	NA	37859614	37856985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_37857710_37859530
transcript_37667.known	chr13	+	2011	10	FSM	ENSG00000139618.17	ENST00000530893.6	2011	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.78030270429573	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCGAAAGACCAAAAATCA	12	True	NA	NA	False	TATAAA	-11	NA	32315504	32333291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_32315668_32316421_32316524_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271
transcript_37670.known	chr13	-	2343	7	FSM	ENSG00000244754.9	ENST00000505213.5	2343	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	82.3522245533713	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTCCTGTGTAACAAC	NA	False	NA	NA	False	AATGAA	-31	NA	32538833	32443696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32444127_32517856_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
transcript_37674.known	chr13	-	5649	7	FSM	ENSG00000244754.9	ENST00000674349.1	5649	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	77.5207857430652	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGAGGATATGAAAT	-1	True	NA	NA	False	NA	NA	NA	32538825	32514019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
transcript_37684.known	chr13	-	9427	6	FSM	ENSG00000244754.9	ENST00000267068.5	9427	6	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_5	6.49923072370877	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGTTGGATTTTTTTA	4	True	NA	1	True	AATAAA	-16	NA	32538782	32510291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
transcript_37685.known	chr13	-	2053	6	FSM	ENSG00000244754.9	ENST00000674484.1	2053	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	47.8664809652851	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-16	True	NA	-16	True	AATAAA	-17	NA	32538802	32517620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538682
transcript_37686.known	chr13	-	2701	6	FSM	ENSG00000244754.9	ENST00000674465.1	2701	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	82.5120597246245	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCATTTCAGAGGTCT	-1	True	NA	-13	True	ATTAAA	-10	NA	32538825	32516900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538777
transcript_37691.known	chr13	-	2706	6	FSM	ENSG00000244754.9	ENST00000674399.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	85.2478738737806	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGAATATCTTCTAGT	-1	True	NA	NA	False	TATAAA	-44	NA	32538825	32517005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527457_32527533_32535768_32537028_32538617
transcript_37698.known	chr13	-	2703	6	FSM	ENSG00000244754.9	ENST00000674421.1	2703	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	91.6907847059889	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCATTTCAGAGGTCT	-13	True	NA	-13	True	ATTAAA	-10	NA	32538799	32516900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538749
transcript_37711.known	chr13	-	1498	5	FSM	ENSG00000244754.9	ENST00000674297.1	1498	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_4	96.892982202015	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGGAATTCATTTCAG	-6	True	NA	-19	True	ATTAAA	-4	NA	32538792	32516906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32538682
transcript_37721.known	chr13	-	2113	4	FSM	ENSG00000244754.9	ENST00000674163.1	2113	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	98.0929264637477	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTAGACAGGTAAAATT	9	False	NA	NA	False	AAGAAA	-36	NA	32538815	32517359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32535768_32537028_32538682
transcript_37727.known	chr13	-	2181	3	FSM	ENSG00000244754.9	ENST00000674433.1	2181	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	1	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAAAAGTGTGCCTGG	-1	True	NA	NA	False	AAAAAG	-30	NA	32538825	32526818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32527533_32535768_32537028_32538617
transcript_37728.known	chr13	-	2055	3	FSM	ENSG00000244754.9	ENST00000674494.1	2055	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	57	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGGGACTTTAAAAAAA	9	False	NA	NA	False	NA	NA	NA	32538815	32526869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32527533_32535768_32537028_32538682
transcript_37729.known	chr13	-	1919	3	FSM	ENSG00000244754.9	ENST00000512755.2	1919	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	100.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTTATCATTAATA	-2	True	NA	NA	False	AATACA	-22	NA	32538826	32526921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32527533_32535768_32537028_32538777
transcript_37731.known	chr13	-	3573	3	FSM	ENSG00000244754.9	ENST00000483088.2	3573	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	101	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACAGATTGAGACCCTG	5	True	NA	NA	False	NA	NA	NA	32538819	32533563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32537028_32538617_32538685_32538777
transcript_37732.known	chr13	-	3691	2	FSM	ENSG00000244754.9	ENST00000674369.1	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	32538825	32533544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32537028_32538617
transcript_37733.known	chr13	-	3626	2	FSM	ENSG00000244754.9	ENST00000674276.1	3626	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	32538825	32533544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32537028_32538682
transcript_37738.known	chr13	-	866	2	FSM	ENSG00000244754.9	ENST00000674408.1	866	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAGACAAAAAG	8	True	NA	NA	False	AAAAAG	-21	NA	32538778	32526827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32527533_32538617
transcript_37740.known	chr13	-	2999	5	FSM	ENSG00000139597.18	ENST00000380130.7	2999	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	5.31507290636732	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTATGATGCAGTATGT	-4	True	NA	NA	False	AATAAA	-22	NA	32428130	32400722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32403201_32404320_32404398_32407249_32407339_32407644_32407773_32427903
transcript_37742.known	chr13	-	1145	2	FSM	ENSG00000139597.18	ENST00000464470.1	1145	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTCTTGTCTCCCAAA	286	False	NA	-3	True	AATAAA	-18	NA	32428014	32424921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32425956_32427903
transcript_37743.known	chr13	+	7472	35	FSM	ENSG00000083642.19	ENST00000315596.15	7472	35	0	0	0	0	multi-exon	TRUE	canonical	2	160	junction_31	30.7740959688333	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGTATTATTTTGTG	-10	True	NA	NA	False	AATAAA	-13	NA	32586451	32778019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_32586594_32648753_32648881_32651803_32652008_32658238_32658326_32658433_32658532_32659153_32659281_32667763_32667845_32673215_32673357_32675843_32675960_32678834_32678930_32683877_32684024_32687133_32687286_32688455_32688570_32694222_32694305_32696853_32696903_32699729_32699870_32701322_32701439_32706933_32707040_32709945_32710107_32732100_32732225_32735171_32735331_32741079_32741149_32742590_32742728_32745976_32746101_32753331_32753537_32755841_32755957_32758086_32758220_32758533_32758654_32759627_32759691_32760574_32760721_32764488_32764595_32770120_32770561_32770653_32770762_32773188_32773325_32775016
transcript_37762.known	chr13	+	2306	9	FSM	ENSG00000133119.13	ENST00000380071.8	2306	9	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_8	46.1410879802373	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAGTCTTTTTGTGGA	-5	True	NA	21	True	AATAAA	-18	NA	33818148	33837500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33836103
transcript_37766.known	chr13	+	1461	9	FSM	ENSG00000133119.13	ENST00000434425.5	1461	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	159.485060036983	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTCTGCTATTTTCT	-5	True	NA	28	True	AATAAA	-27	NA	33818068	33966558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33966086
transcript_37781.nic	chr13	+	1023	10	ISM	ENSG00000172915.20	ENST00000687732.1	2285	12	11656	937	-7499	43	3prime_fragment	FALSE	canonical	3	17	junction_3	2.45452467048606	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAAAGGGAATGTGA	NA	False	NA	NA	False	ATTAAA	-3	NA	35110877	35159095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_35110979_35117413_35117494_35118227_35118291_35118376_35118475_35123481_35123575_35142268_35142378_35155773_35155856_35156082_35156207_35157077_35157271_35159015
transcript_37782.nic	chr13	+	1963	10	ISM	ENSG00000172915.20	ENST00000689207.1	4446	29	-708	433962	-708	-401	5prime_fragment	FALSE	canonical	0	0	junction_3	13.4834145948199	94	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACACCAACTCCTGGTGA	NA	False	NA	NA	False	CATAAA	-8	NA	35159173	35195901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_35160033_35161749_35161968_35164355_35164510_35168986_35168996_35171271_35171453_35173463_35173595_35176995_35177104_35182359_35182529_35183975_35184072_35195863
transcript_37785.known	chr13	-	7592	14	FSM	ENSG00000133083.15	ENST00000615680.4	7592	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	31.524011699171	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTATTTTATCCTTCAAC	NA	False	NA	NA	False	AATAAA	-15	NA	35855861	35768651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_35774700_35788211_35788286_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
transcript_37786.known	chr13	-	4612	13	FSM	ENSG00000133083.15	ENST00000379893.5	4612	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	9.8273286751227	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTGTGTTCAATG	120	False	NA	-4	True	AATAAA	-14	NA	35855642	35771338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
transcript_37793.nic	chr13	-	1403	3	ISM	ENSG00000133083.15	ENST00000379893.5	4612	13	-114	66777	28	7784	5prime_fragment	FALSE	canonical	3	85	junction_1	2	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGCTAAGCCTTTTT	6	False	NA	NA	False	AATGAA	-22	NA	35855756	35838115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_35839177_35854498_35854594_35855509
transcript_37795.known	chr13	-	5247	3	FSM	ENSG00000133083.15	ENST00000460982.1	5247	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	32	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTTCAGTGAGTTTC	NA	False	NA	-1	True	AATAAA	-15	NA	35855784	35845899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_35850777_35854498_35854594_35855509
transcript_37802.nnic	chr13	-	2689	16	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-54	577	combination_of_known_splicesites	FALSE	canonical	3	122	junction_5	50.9629931093795	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	NA	False	NA	-12	True	AATAAA	-21	NA	36297896	36168216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_37803.nnic	chr13	-	2648	15	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-54	577	combination_of_known_splicesites	FALSE	canonical	3	57	junction_13	52.9786730290441	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	NA	False	NA	-12	True	AATAAA	-21	NA	36297896	36168216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_3781.known	chr1	-	2774	17	FSM	ENSG00000183431.12	ENST00000373019.5	2774	17	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_7	109.103090584089	4444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATCTTTTTCTTTATA	-8	True	NA	-6	True	AATAAA	-18	NA	37990022	37956974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_37813.nnic	chr13	-	1258	7	Fusion	ENSG00000120669.16_ENSG00000242715.8	novel	541	5	NA	NA	-56	-19486	multi-exon	FALSE	canonical	3	147	junction_1	48.0049187294617	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGATATTTTCATGGGG	NA	False	NA	NA	False	NA	NA	NA	36297896	36201477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr13_-_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_3782.known	chr1	-	776	8	FSM	ENSG00000183431.12	ENST00000461869.5	776	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	531.343810444762	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAAGGAATAGTTTTTCT	-3	True	NA	NA	False	NA	NA	NA	37990075	37978989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37989547_37989596_37989869
transcript_37822.known	chr13	-	837	8	FSM	ENSG00000242715.8	ENST00000503173.5	837	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	80.511629277885	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	76	False	NA	-82	True	NA	NA	NA	36297749	36227119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_37824.known	chr13	-	1158	8	FSM	ENSG00000242715.8	ENST00000239859.8	1158	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	71.4437126809116	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGTCCATTTTAAG	11	True	NA	NA	False	TTTAAA	-22	NA	36297814	36230774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_37830.known	chr13	-	1632	5	FSM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	69.6132171358284	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-7	True	NA	-13	True	AATAAA	-17	NA	36297832	36280056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36281261_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_37834.nnic	chr13	-	1616	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	77.4611013491431	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-32	True	NA	-13	True	AATAAA	-17	NA	36297857	36280056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36281261_36283591_36283703_36295777_36295858_36297636
transcript_37835.nic	chr13	-	2067	4	NIC	ENSG00000242715.8	novel	887	3	NA	NA	-197	896	combination_of_known_junctions	FALSE	canonical	3	103	junction_1	41.3145118437685	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATCTCTCTTTTATTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	36298037	36281931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36283407_36283591_36283703_36295777_36295858_36297636
transcript_37839.known	chr13	-	1306	9	FSM	ENSG00000242715.8	ENST00000479850.6	1306	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.448858986758	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCGAGCTGACTTCACC	-15	True	NA	-7	True	AATGAA	-14	NA	36297840	36227044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36227382_36244456_36244614_36248605_36248683_36253802_36253857_36254044_36254144_36274301_36274528_36283468_36283510_36283591_36283703_36297636
transcript_3784.known	chr1	-	1091	6	FSM	ENSG00000183386.10	ENST00000477194.5	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	59.1046529471242	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACCTCTGGGACTCA	7147	False	NA	NA	False	NA	NA	NA	38005606	37997344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005438
transcript_37840.known	chr13	-	887	3	FSM	ENSG00000242715.8	ENST00000485600.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	50.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTAGGGCATATCTAAG	-12	True	NA	NA	False	AGTAAA	-2	NA	36297837	36282827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36283407_36283591_36283699_36297636
transcript_37843.known	chr13	-	3018	10	FSM	ENSG00000133104.14	ENST00000494062.2	3018	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	259.586756115595	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	7	True	NA	-12	True	ATTAAA	-17	NA	36346493	36303601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346313
transcript_37844.nnic	chr13	-	3049	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	134	junction_9	229.012587933718	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	36346792	36303601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_37847.nnic	chr13	-	2932	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	5	-117	combination_of_known_splicesites	FALSE	canonical	3	134	junction_9	229.012587933718	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTGAGACTGTATT	NA	False	NA	-17	True	AATAAA	-21	NA	36346792	36303718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_37848.known	chr13	-	4900	9	FSM	ENSG00000133104.14	ENST00000438666.7	4900	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	209.530278241594	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-19	True	NA	0	True	TATAAA	-21	NA	36346394	36301637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_37849.known	chr13	-	4944	9	FSM	ENSG00000133104.14	ENST00000451493.5	4944	9	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_8	70.8025423272357	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTTTTCTTGACCT	NA	False	NA	-2	True	TATAAA	-19	NA	36346797	36301639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
transcript_3786.nnic	chr1	-	1406	5	NIC	ENSG00000183386.10	novel	1656	6	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_4	86.1869334644179	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	7231	False	NA	-9	True	AATAAA	-14	NA	38005522	37996769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_38005438
transcript_37872.known	chr13	-	796	2	FSM	ENSG00000133104.14	ENST00000494703.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTATAGGAATCATTCT	-18	True	NA	NA	False	NA	NA	NA	36346777	36335232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36335833_36346581
transcript_37873.known	chr13	+	1699	9	FSM	ENSG00000133101.10	ENST00000625767.1	1699	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.06664701255129	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	28	False	NA	3	True	AATAAA	-16	NA	36432522	36442870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_36432730_36433035_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_37875.known	chr13	+	1730	9	FSM	ENSG00000133101.10	ENST00000255465.7	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.75302360373035	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	0	True	NA	3	True	AATAAA	-16	NA	36432494	36442870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_36432730_36433032_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_37876.known	chr13	+	3099	2	FSM	ENSG00000180440.4	ENST00000315190.4	3099	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCTTTGATTCTTT	-16	True	NA	11	True	AATAAA	-20	NA	36674019	36697839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_36674185_36694905
transcript_37878.known	chr13	+	2306	3	FSM	ENSG00000133111.4	ENST00000255476.3	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	15.5	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGATTTCTTTATTC	-29	True	NA	15	True	ATTAAA	-21	NA	36819221	36829104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_36819958_36825427_36825536_36827642
transcript_3788.nnic	chr1	-	1236	4	NIC	ENSG00000183386.10	novel	1656	6	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	97.1642366763043	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	7231	False	NA	-9	True	AATAAA	-14	NA	38005522	37996769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_37997560_37997683_37997871_37998973_37999149_38005438
transcript_37880.known	chr13	-	2923	26	FSM	ENSG00000102710.21	ENST00000350612.11	2923	26	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_2	129.513205504304	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	28	False	37059716	-24	True	AATACA	-25	NA	37059688	37009311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_37891.known	chr13	-	2681	25	FSM	ENSG00000102710.21	ENST00000356185.7	2681	25	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_20	139.417812308503	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGGTTTGCCTAAG	4	True	NA	95	True	AATAAA	-23	NA	37059650	37009493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059479
transcript_37892.known	chr13	-	2843	25	FSM	ENSG00000102710.21	ENST00000360252.8	2843	25	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_20	109.382737821529	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTGGCTGTTTAT	3	False	NA	-28	True	AATACA	-21	NA	37059713	37009315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_37893.known	chr13	-	2836	25	FSM	ENSG00000102710.21	ENST00000475892.5	2836	25	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	108.036251310485	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	5	True	NA	96	True	AATAAA	-24	NA	37059649	37009492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022318_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_37899.known	chr13	-	2625	25	FSM	ENSG00000102710.21	ENST00000464744.5	2625	25	0	0	0	0	multi-exon	FALSE	canonical	2	76	junction_24	145.033688615209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAGTTTCTACTTTTTG	1	True	NA	-28	True	TTTAAA	-25	NA	37059432	37009616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059194
transcript_3793.known	chr1	+	2023	8	FSM	ENSG00000183520.12	ENST00000373014.5	2023	8	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_4	62.9713248637985	2737	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATAGTGTTTTATCTAG	3	True	NA	19	True	AATAAA	-16	NA	38012733	38024820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38012866_38016358_38016421_38017667_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
transcript_3794.known	chr1	+	630	4	FSM	ENSG00000228436.4	ENST00000433671.2	630	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAATAAAGTTTTCTATG	20	True	NA	NA	False	NA	NA	NA	38859999	38919396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38860240_38875940_38876019_38913539_38913629_38919173
transcript_37946.known	chr13	-	1057	10	FSM	ENSG00000120697.10	ENST00000681893.1	1057	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	124.125384636307	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	338	False	NA	-12	True	AATAAA	-15	NA	37000741	36949838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_37000696
transcript_37950.known	chr13	+	694	9	FSM	ENSG00000120699.14	ENST00000239893.9	694	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	765.729390842483	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATGTTCCCGCCACTTC	-5	True	NA	NA	False	NA	NA	NA	37000782	37008833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_37000823_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008061_37008178_37008728
transcript_37957.known	chr13	-	734	9	FSM	ENSG00000102710.21	ENST00000497318.1	734	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	165.712099739277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTGTTTTGTTTTTTA	25	True	NA	NA	False	NA	NA	NA	37059629	37040404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_37964.known	chr13	-	960	8	FSM	ENSG00000120697.10	ENST00000679673.1	960	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	142.577154193648	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	30	True	NA	1	True	TATAAA	-33	NA	36999300	36949737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36999234
transcript_3797.known	chr1	+	675	3	FSM	ENSG00000228436.4	ENST00000663032.2	770	3	0	95	0	35	multi-exon	FALSE	canonical	1	1	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGATGACTGAGATTA	15	False	NA	NA	False	AATAAA	-26	NA	38859911	38919431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38860240_38913539_38913629_38919173
transcript_37971.known	chr13	+	1166	11	FSM	ENSG00000120699.14	ENST00000389704.4	1166	11	0	0	0	0	multi-exon	FALSE	canonical	1	567	junction_10	396.674186203237	3403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGATTCAGTGCTCT	-2	True	NA	19	True	ATTAAA	-24	NA	37000785	37009614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_37972.known	chr13	-	1219	10	FSM	ENSG00000120697.10	ENST00000239891.4	1219	10	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	32.9706191691188	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-10	True	NA	1	True	TATAAA	-33	NA	36999340	36949737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_37973.known	chr13	-	1064	9	FSM	ENSG00000120697.10	ENST00000681043.1	1064	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	133.368849436441	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-12	True	NA	-21	True	AATAAA	-6	NA	36999342	36949847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36995424_36995597_36999234
transcript_37974.known	chr13	-	919	9	FSM	ENSG00000120697.10	ENST00000680488.1	919	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	132.305930989506	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGCCTTTTGATA	30	True	NA	-19	True	AATAAA	-8	NA	36999300	36949845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_37975.known	chr13	-	1044	9	FSM	ENSG00000120697.10	ENST00000680671.1	1044	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	137.224212058222	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTCATTGTCTGCCT	-10	True	NA	-26	True	AATAAA	-1	NA	36999340	36949852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_37976.known	chr13	-	1110	10	FSM	ENSG00000120697.10	ENST00000680795.1	1110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	168.666959449314	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTCTGCCTTTTG	6	True	NA	-22	True	AATAAA	-5	NA	36999324	36949848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995426_36995617_36999234
transcript_37977.known	chr13	-	897	8	FSM	ENSG00000120697.10	ENST00000681208.1	897	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	142.718218164039	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-10	True	NA	-21	True	AATAAA	-6	NA	36999340	36949847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_37978.known	chr13	+	2423	10	FSM	ENSG00000120699.14	ENST00000490537.6	2423	10	0	0	0	0	multi-exon	FALSE	canonical	1	60	junction_4	627.245477376194	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	-1	True	NA	43	True	AATAAA	-24	NA	37000786	37009401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37004562_37005956_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_37979.known	chr13	-	3196	22	FSM	ENSG00000133110.15	ENST00000379743.8	3196	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.10387828898805	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATTAGTGTTTCTTGA	16	False	NA	NA	False	ATTAAA	-10	NA	37598750	37562590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37563371_37564518_37564561_37569299_37569384_37569743_37569822_37570579_37570670_37571368_37571459_37577752_37577799_37578843_37578912_37579018_37579122_37579228_37579360_37579860_37579992_37580560_37580698_37582365_37582515_37583968_37584104_37584715_37584929_37586138_37586281_37586781_37586929_37587821_37587987_37590371_37590530_37592099_37592165_37597183_37597283_37598607
transcript_3798.known	chr1	+	441	2	FSM	ENSG00000228436.4	ENST00000456813.2	501	2	58	2	58	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCTGGTTGCTTTACT	58	False	NA	NA	False	AATATA	-16	NA	38860082	38876224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38860240_38875940
transcript_37985.known	chr13	-	2912	10	FSM	ENSG00000133107.15	ENST00000338947.9	2912	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	36.411231478457	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACCCACAGAAACATTT	10	False	NA	-12	True	AATAAA	-31	NA	37869802	37636640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37637626_37639039_37639130_37639257_37639300_37651264_37651460_37655087_37655284_37663415_37663730_37674227_37674368_37691998_37692336_37782955_37783361_37869594
transcript_37986.known	chr13	+	3082	2	FSM	ENSG00000287477.1	ENST00000660705.1	3082	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCTGGAGGCTGAGGCAG	NA	False	NA	NA	False	AATACA	-44	NA	37869824	37874444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_37870667_37872204
transcript_37987.nnic	chr13	-	1519	2	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-641	145826	-641	-119263	5prime_fragment	FALSE	canonical	3	155	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCTCATAAATTGGAAACA	NA	False	NA	NA	False	AATAAA	-15	NA	37870443	37782690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_37783361_37869594
transcript_37996.known	chr13	+	1030	4	FSM	ENSG00000274317.2	ENST00000666031.1	1030	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.23609564462324	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTCTTCTCCAATCT	NA	False	NA	NA	False	AAGAAA	-6	NA	37934297	38029695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_37935038_37997811_37997938_38013384_38013502_38029648
transcript_38.known	ERCC-00085	+	828	1	FSM	ERCC-00085A	DQ883669	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00085_+_0_800
transcript_3800.known	chr1	-	2681	7	FSM	ENSG00000116954.8	ENST00000373001.4	2681	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	12.7671453348037	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTTTCTCCTTGCCTG	-5	True	NA	0	True	AATAAA	-17	NA	38859772	38838197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_38839705_38845938_38846088_38851614_38851758_38852373_38852489_38855707_38855908_38856878_38857083_38859409
transcript_38009.known	chr13	+	3168	6	FSM	ENSG00000120686.12	ENST00000239878.9	3168	6	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_5	56.1519367430902	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGAATTCTGATTTAT	-9	True	NA	NA	False	ATTAAA	-22	NA	38349850	38363619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_38011.known	chr13	+	846	6	FSM	ENSG00000120686.12	ENST00000379649.5	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	300.76675348183	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCATCTGAGATAAAAA	-9	True	NA	NA	False	ATTAAA	-17	NA	38349850	38361125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_38349922_38349998_38350228_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_38018.known	chr13	+	777	3	FSM	ENSG00000120686.12	ENST00000494372.1	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	43.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGGAGACTTAGGGTTC	-11	True	NA	NA	False	AAAAAG	-35	NA	38349848	38354885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_38349922_38349998_38350056_38354238
transcript_38019.known	chr13	+	585	3	FSM	ENSG00000120686.12	ENST00000464423.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	374	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTGCTGATTTTTAAA	26	True	NA	NA	False	AATGAA	-28	NA	38349885	38354558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_38349922_38349998_38350228_38354238
transcript_38020.known	chr13	-	1886	7	FSM	ENSG00000133115.12	ENST00000379631.9	1886	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGGAGGTTATTTCG	-1	True	NA	NA	False	TATAAA	-17	NA	38990831	38965924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_38967050_38968399_38968535_38970184_38970389_38972511_38972595_38976539_38976613_38976693_38976798_38990669
transcript_38022.known	chr13	+	3411	7	FSM	ENSG00000188811.14	ENST00000379600.8	3411	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	22.9177272481855	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	50	True	NA	30	True	ATTAAA	-23	NA	39038455	39050109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_38025.known	chr13	+	3275	6	FSM	ENSG00000188811.14	ENST00000379599.6	3275	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	39.9529723550076	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	-15	True	NA	30	True	ATTAAA	-23	NA	39038390	39050109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39044089_39044182_39047039_39047153_39047673
transcript_38030.nic	chr13	+	1036	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-145	5899	0	-254	5prime_fragment	FALSE	canonical	3	74	junction_3	23.3813494050279	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTCTGAATATGTTT	-15	True	NA	23	True	AATACA	-19	NA	39038310	39044210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_38031.nic	chr13	+	2107	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-145	4828	0	817	5prime_fragment	FALSE	canonical	3	74	junction_3	23.3813494050279	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGAGCTTGGGTGAC	-15	True	NA	5	True	ATTAAA	-14	NA	39038310	39045281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_38036.nic	chr13	+	1035	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-80	10077	0	-1785	5prime_fragment	FALSE	canonical	3	114	junction_1	11.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATCAGCCAGGCGTGG	-15	True	NA	NA	False	AATACA	-12	NA	39038310	39040032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_38037.nic	chr13	+	1203	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-80	9909	0	-1617	5prime_fragment	FALSE	canonical	3	114	junction_1	11.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAATTTGACAA	-15	True	NA	NA	False	NA	NA	NA	39038310	39040200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_38041.nic	chr13	+	1312	2	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-80	10075	0	-1783	intron_retention	FALSE	canonical	3	114	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCCAGGCGTGGTG	-15	True	NA	NA	False	AATACA	-14	NA	39038310	39040034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135
transcript_38043.known	chr13	-	2132	4	FSM	ENSG00000183722.9	ENST00000379589.4	2132	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	9.2736184954957	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	140	False	39603214	-3	True	AATAAA	-19	NA	39603193	39342891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_39344055_39378427_39378527_39600831_39601391_39602882
transcript_38044.nnic	chr13	-	1408	3	NNC	ENSG00000183722.9	novel	2132	4	NA	NA	180206	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_2	31	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	NA	False	NA	-3	True	AATAAA	-19	NA	39422987	39342891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_39344055_39378427_39378527_39422841
transcript_38045.nnic	chr13	-	1406	3	NNC	ENSG00000183722.9	novel	2132	4	NA	NA	180172	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	29.5	146	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	NA	False	NA	-3	True	AATAAA	-19	NA	39423021	39342891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_39344055_39378427_39378527_39422877
transcript_38047.known	chr13	+	3574	19	FSM	ENSG00000133103.17	ENST00000455146.8	3574	19	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	17.2634810446149	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGCAGCAATTATTGC	-24	True	NA	13	True	AATAAA	-14	NA	39655661	39752628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_39655880_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
transcript_3806.known	chr1	-	2532	5	FSM	ENSG00000214114.9	ENST00000397572.5	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_4	36.779749863206	1889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTGCAAACTGTAAAG	7	True	NA	-4	True	ATTAAA	-17	NA	38873348	38862492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_38864715_38866879_38867010_38867561_38867611_38873017_38873091_38873290
transcript_38061.known	chr13	-	1486	7	FSM	ENSG00000102738.8	ENST00000323563.8	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_6	24.3629956194955	938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTCTTTTCACTCGGT	-13	True	NA	NA	False	AATACA	-21	NA	40771190	40729127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_40729602_40749137_40749282_40754018_40754093_40756872_40757014_40758947_40759107_40766745_40767034_40770984
transcript_38065.known	chr13	+	3821	7	FSM	ENSG00000102743.15	ENST00000338625.9	3821	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	20.387904911164	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	0	True	NA	15	True	ATTAAA	-15	NA	40789610	40812460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542
transcript_38069.known	chr13	-	291	3	FSM	ENSG00000239827.8	ENST00000632751.1	291	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAAATTGGTCTTTCA	9	True	NA	NA	False	AATAAA	-20	NA	40921661	40913915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_40914106_40921473_40921532_40921618
transcript_38070.known	chr13	-	572	3	FSM	ENSG00000239827.8	ENST00000633814.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGACTTACAGAAAATTTG	-9	True	NA	NA	False	NA	NA	NA	40921740	40882576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_40882973_40908158_40908213_40921618
transcript_38072.nic	chr13	-	1306	5	NIC	ENSG00000120690.16	novel	3678	9	NA	NA	53	-16368	combination_of_known_junctions	FALSE	canonical	3	28	junction_4	8.52936105461599	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGTTACTTTGTT	2	True	NA	NA	False	NA	NA	NA	41061387	40949806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41060837
transcript_38073.known	chr13	-	3678	9	FSM	ENSG00000120690.16	ENST00000239882.7	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	13.5963000481749	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGAATATCATCCTTTC	0	True	NA	NA	False	AATAAA	-16	NA	41019316	40931923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_40934029_40940920_40941371_40942951_40943145_40943841_40943926_40949805_40949974_40951328_40951437_40958835_40959017_40981982_40982283_41019227
transcript_38076.known	chr13	+	2388	10	FSM	ENSG00000120688.9	ENST00000379487.5	2388	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_8	26.1023626006025	1100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATATTGTTATTCTAA	-25	True	NA	NA	False	ATTAAA	-19	NA	41061508	41084006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043_41076238_41080645_41080810_41082703
transcript_38077.known	chr13	-	5234	1	FSM	ENSG00000165572.8	ENST00000379485.2	5234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGCTTCCTGACTTTTT	-25	True	NA	-5	True	AATAAA	-14	NA	41132802	41127568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41127600_41132800
transcript_38081.known	chr13	+	613	4	FSM	ENSG00000278390.6	ENST00000620300.4	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	1.63299316185545	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACATCTTACCAGGAGA	6	True	NA	NA	False	ATTAAA	-35	NA	41132951	41175659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41175372
transcript_38084.known	chr13	+	605	4	FSM	ENSG00000278390.6	ENST00000616251.2	664	4	59	0	52	0	multi-exon	FALSE	canonical	0	0	junction_3	4.10960933531265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAACCATTGCTATTT	65	False	NA	NA	False	AATAAA	-42	NA	41133010	41187568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41187230
transcript_38085.known	chr13	+	382	3	FSM	ENSG00000278390.6	ENST00000660769.1	382	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTCCCACTTTATTCT	2	True	NA	NA	False	AATAAA	-20	NA	41132947	41146646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41133056_41134708_41134763_41146426
transcript_3811.known	chr1	-	750	4	FSM	ENSG00000214114.9	ENST00000494695.4	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	146.827184888297	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTTTGTACGGGTTCC	-13	True	NA	NA	False	NA	NA	NA	38873368	38864235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_38864715_38866879_38867000_38873017_38873091_38873290
transcript_38112.known	chr13	-	2184	10	FSM	ENSG00000120662.16	ENST00000379480.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	25.2195299591016	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTTTGACTTCTATT	-6	True	NA	-17	True	TATAAA	-25	NA	41263576	41216368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_38128.nnic	chr13	-	1125	8	NNC	ENSG00000120662.16	novel	1561	7	NA	NA	-13	-13592	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	36.4434143430551	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCCCGGTGCAGTGGCT	-20	True	NA	NA	False	NA	NA	NA	41263590	41230566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_41230590_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_38140.nic	chr13	-	1434	7	NIC	ENSG00000120662.16	novel	1948	12	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_6	34.7403064017704	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGCTAATGTGTTTG	200	False	NA	1	True	TATAAA	-25	NA	41263598	41252281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41261690_41261826_41262214_41262332_41263484
transcript_38149.known	chr13	-	820	6	FSM	ENSG00000120662.16	ENST00000452359.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	43.5182720245186	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACCAGCAGATTATGG	251	False	NA	NA	False	TATAAA	-25	NA	41263547	41252663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41262410_41262482_41263484
transcript_38152.nic	chr13	-	1174	5	ISM	ENSG00000120662.16	ENST00000379480.9	2184	10	-14	35913	-13	0	5prime_fragment	FALSE	canonical	3	22	junction_4	34.3320185832409	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGCTAATGTGTTTG	-20	True	NA	1	True	TATAAA	-25	NA	41263590	41252281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_38153.known	chr13	-	1948	12	FSM	ENSG00000120662.16	ENST00000379477.5	1948	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	28.9239527264569	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGAAGTCACATTTCCTG	314	False	NA	-12	True	CATAAA	-17	NA	41263484	41216974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41261690_41261826_41262214_41262332_41263274
transcript_38154.known	chr13	-	737	4	FSM	ENSG00000120662.16	ENST00000480434.5	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	14.6590889515307	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAGTGGCTAATGTGTT	3212	False	NA	-1	True	TATAAA	-23	NA	41260586	41252283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492
transcript_38155.known	chr13	+	4285	20	FSM	ENSG00000172766.19	ENST00000379406.8	4285	20	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_13	12.3045382704863	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	1	True	NA	12	True	AATAAA	-18	NA	41311266	41377030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
transcript_38160.known	chr13	+	1751	11	FSM	ENSG00000172766.19	ENST00000403412.7	1751	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	8.88594395660922	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTTGTCTGTGTAA	14	True	NA	4	True	AATAAA	-22	NA	41311279	41358718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303
transcript_38162.known	chr13	+	1642	10	FSM	ENSG00000172766.19	ENST00000476980.5	1642	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	39.6300796097679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTTGTCTGTGTAA	16	True	NA	4	True	AATAAA	-22	NA	41311281	41358718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41355143_41355217_41358303
transcript_38164.nnic	chr13	+	1980	4	NNC	ENSG00000172766.19	novel	1642	10	NA	NA	-38	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	60.3176775267601	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTTGTTATTCT	-37	True	NA	21	True	AATAAA	-27	NA	41311228	41377039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_41311583_41316845_41316931_41318805_41319553_41376245
transcript_38165.nic	chr13	+	486	3	ISM	ENSG00000172766.19	ENST00000403412.7	1751	11	-51	39866	-38	-17835	5prime_fragment	FALSE	canonical	3	118	junction_2	9	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGCTTATGAGTTTGT	-37	True	NA	NA	False	NA	NA	NA	41311228	41318852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_41311583_41316845_41316931_41318805
transcript_38166.known	chr13	-	3475	26	FSM	ENSG00000102763.18	ENST00000281496.6	3475	26	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_11	6.85273667960473	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCAGTCCTTTTGTTG	-20	True	NA	-7	True	AATAAA	-26	NA	41961120	41719336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
transcript_38174.known	chr13	+	9915	13	FSM	ENSG00000023516.9	ENST00000025301.4	9915	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	8.59586463881842	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTTGGTTTTCATTC	-16	True	NA	9	True	AATAAA	-12	NA	42272151	42323261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_42272229_42285985_42286036_42286299_42286400_42292384_42292502_42295694_42295743_42297047_42297183_42298532_42298798_42299362_42303864_42308453_42308610_42313046_42313131_42313893_42313941_42317527_42317689_42319087
transcript_38178.known	chr13	+	2201	5	FSM	ENSG00000120659.15	ENST00000398795.7	2201	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	12.2065556157337	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	0	True	NA	12	True	AATAAA	-18	NA	42574151	42608013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_42574523_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_38179.nnic	chr13	+	2092	5	NNC	ENSG00000120659.15	novel	1520	7	NA	NA	276	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	30.7764114217366	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	428	False	NA	12	True	AATAAA	-18	NA	42574579	42608013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_42574842_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_38185.nnic	chr13	-	1543	5	NNC	ENSG00000229546.1	novel	227	2	NA	NA	-29972	1250	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_3	16.0234203589621	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGACCTGGTCTTAATC	3261	False	NA	-6	True	ATTAAA	-17	NA	42872859	42841163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_42842100_42842413_42842552_42842798_42842888_42862087_42862166_42872557
transcript_38186.known	chr13	-	3160	13	FSM	ENSG00000133106.15	ENST00000313640.11	3160	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	80.3580096955009	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTTTCCTTTGTGGTT	11	True	NA	-2	True	AATAAA	-41	NA	42992230	42886387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_42888503_42889210_42889243_42895008_42895109_42900309_42900384_42917540_42917625_42919299_42919333_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_38187.nic	chr13	-	1734	12	NIC	ENSG00000133106.15	novel	3160	13	NA	NA	-160	512	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	65.1178207444966	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCATTTTTATTTTTAA	NA	False	NA	NA	False	AATAAA	-23	NA	42992431	42887981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_42888503_42889210_42889243_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_38188.known	chr13	-	957	12	FSM	ENSG00000133106.15	ENST00000398762.7	957	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	69.3200744898094	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATATTGACTCCTATCT	76	False	NA	NA	False	NA	NA	NA	42992165	42888493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42919299_42919333_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_38192.known	chr13	-	3106	11	FSM	ENSG00000133106.15	ENST00000313624.12	3106	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	23.7705700394416	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTTTCCTTTGTGGTT	0	True	NA	-2	True	AATAAA	-41	NA	42992241	42886387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_38195.nic	chr13	-	1561	10	NIC	ENSG00000133106.15	novel	3106	11	NA	NA	-78	512	combination_of_known_junctions	FALSE	canonical	3	7	junction_9	66.4637653068605	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTCATTTTTATTTTTAA	NA	False	NA	NA	False	AATAAA	-23	NA	42992349	42887981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42991977
transcript_38198.nic	chr13	-	967	8	ISM	ENSG00000133106.15	ENST00000313624.12	3106	11	-190	31193	-160	1723	5prime_fragment	FALSE	canonical	3	159	junction_3	22.6760684783023	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAAATTGCAAAAGATGA	NA	False	NA	-35	True	AAGAAA	-2	NA	42992431	42917580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_38207.nic	chr13	-	670	4	ISM	ENSG00000133106.15	ENST00000398762.7	957	12	-266	75573	-160	-765	5prime_fragment	FALSE	canonical	3	200	junction_3	9.89949493661167	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGAATTCATCTCTTTT	NA	False	NA	NA	False	AATACA	-8	NA	42992431	42964066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_42964140_42969093_42969178_42970611_42970671_42991977
transcript_3826.known	chr1	-	1883	8	FSM	ENSG00000158315.11	ENST00000372990.6	1883	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.55550625999976	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTCCTGATAATCA	-14	True	NA	NA	False	AATAAA	-16	NA	38941830	38885806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_38886684_38887962_38888025_38893163_38893225_38895968_38896070_38911321_38911435_38915561_38915711_38918966_38919338_38941681
transcript_38296.known	chr13	+	7459	6	FSM	ENSG00000120675.6	ENST00000379221.4	7459	6	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	86.1059812092052	1391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACTCAATTTTTCTGT	-23	True	NA	NA	False	AATAAA	-22	NA	43023585	43114213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_43023735_43065685_43065738_43068929_43069004_43078611_43078689_43085767_43085839_43107177
transcript_38297.known	chr13	-	2059	7	FSM	ENSG00000151773.13	ENST00000444614.8	2059	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.43471156521669	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCGTATTCTGTGACTA	-4	True	NA	NA	False	AATAAA	-24	NA	43879740	43836351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_43837430_43858780_43858898_43859671_43860071_43868693_43868804_43869330_43869490_43874841_43874928_43879630
transcript_38299.known	chr13	+	4028	7	FSM	ENSG00000179630.11	ENST00000325686.7	4028	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	6.26276474268531	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTATCTCTGCCAA	-2	True	NA	7	True	AATAAA	-20	NA	43879903	43893932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_43880120_43880951_43881548_43882184_43882364_43883770_43883937_43888756_43888983_43890113_43890275_43891448
transcript_38311.nnic	chr13	-	1201	5	NNC	ENSG00000151773.13	novel	272	2	NA	NA	-53	-2301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.57171971404746	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTCAGCCTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-17	NA	43879793	43838652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_43839089_43858780_43858898_43859671_43860071_43874841_43874928_43879630
transcript_38312.nic	chr13	-	1186	5	ISM	ENSG00000151773.13	ENST00000476570.2	3467	7	-102	5315	-53	-1252	5prime_fragment	FALSE	canonical	2	6	junction_3	2.58602010819715	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCCATTTGTTGTAGAAA	NA	False	NA	-3	True	AATAAA	-16	NA	43879793	43859402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_43860071_43868693_43868804_43869330_43869490_43874841_43874928_43879630
transcript_38313.nic	chr13	-	747	4	NIC	ENSG00000151773.13	novel	2059	7	NA	NA	-53	-648	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	3.29983164553722	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGAAAAGAAATAGAGGT	NA	False	NA	NA	False	AAAAAG	-13	NA	43879793	43858798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_43858898_43859671_43860071_43874841_43874928_43879630
transcript_38316.nic	chr13	-	920	3	NIC	ENSG00000151773.13	novel	2059	7	NA	NA	-53	-1249	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTTGTTGTAGAAAATG	NA	False	NA	0	True	AATAAA	-19	NA	43879793	43859399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_43860071_43874841_43874928_43879630
transcript_38321.nic	chr13	-	335	3	ISM	ENSG00000151773.13	ENST00000476570.2	3467	7	-102	15316	-53	5349	5prime_fragment	FALSE	canonical	2	6	junction_1	3.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAGAGATTACAGAC	NA	False	NA	NA	False	AGTAAA	-17	NA	43879793	43869403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_43869490_43874841_43874928_43879630
transcript_38323.known	chr13	-	272	2	FSM	ENSG00000151773.13	ENST00000611737.1	272	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCTAAAGCCTGTTT	9	True	NA	NA	False	AAAACA	-13	NA	43879727	43874752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_43874928_43879630
transcript_38325.known	chr13	-	651	1	FSM	ENSG00000151773.13	ENST00000614023.1	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTTTGACTAATTTGA	NA	False	NA	2	True	AATAAA	-17	NA	43858801	43858150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_43858200_43858800
transcript_38326.known	chr13	+	499	4	FSM	ENSG00000227258.7	ENST00000444663.6	706	4	203	4	125	-4	multi-exon	FALSE	canonical	2	6	junction_1	1.88561808316413	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTTGCAGTTGCCTATT	215	False	NA	4	True	NA	NA	NA	44142545	44148030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44147937
transcript_38327.nnic	chr13	+	458	4	NNC	ENSG00000227258.7	novel	706	4	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.10960933531265	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTTGCAGTTGCCTATT	-8	True	NA	4	True	NA	NA	NA	44142322	44148030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_44142433_44143556_44143738_44146781_44146856_44147937
transcript_38329.known	chr13	+	1793	3	FSM	ENSG00000227258.7	ENST00000654757.1	1793	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATAGAATGGATCACAAA	-17	True	NA	-16	True	NA	NA	NA	44142313	44148010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44142697_44143556_44143738_44146781
transcript_38332.known	chr13	-	1213	3	FSM	ENSG00000226519.3	ENST00000654658.1	1213	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTATCTTCTTTTACT	NA	False	NA	NA	False	AATAAA	-19	NA	44108684	44105487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44106458_44107091_44107218_44108567
transcript_38333.known	chr13	+	802	3	FSM	ENSG00000151778.11	ENST00000379179.8	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGTGTGGGTTACAGT	-9	True	NA	13	True	AATAAA	-19	NA	44373823	44397714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44374110_44379640_44379714_44397271
transcript_38335.known	chr13	-	978	2	FSM	ENSG00000237361.4	ENST00000432701.3	1123	2	68	77	68	-77	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTCCCAAATGTTCATT	9008	False	NA	2	True	ATTAAA	-18	NA	44405885	44400249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44400956_44405613
transcript_38336.known	chr13	-	628	2	FSM	ENSG00000237361.4	ENST00000607312.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTCTGCAGGGAGGGCA	-4	True	NA	NA	False	NA	NA	NA	44405984	44404354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44404612_44405613
transcript_38339.known	chr13	-	2872	3	FSM	ENSG00000102804.15	ENST00000622051.1	2872	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	518.5	240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	-20	True	NA	NA	False	ATTAAA	-16	NA	44437254	44432142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44434884_44436043_44436096_44437175
transcript_38340.known	chr13	+	1658	1	FSM	ENSG00000278156.2	ENST00000617014.1	1658	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTGTTCTATGATATTA	NA	False	NA	NA	False	AATAAA	-22	NA	44577489	44579147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44577500_44579100
transcript_38341.known	chr13	-	3480	10	FSM	ENSG00000083635.8	ENST00000379161.5	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	16.6533279957291	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTTACTTTGTA	-11	True	NA	-1	True	ATTAAA	-15	NA	44989471	44939248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44941323_44943441_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
transcript_3835.known	chr1	+	2688	5	FSM	ENSG00000174574.16	ENST00000432648.8	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	2739	junction_1	54.4902514216993	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGGTGATTTGTTTC	-1	True	NA	50	True	ATTAAA	-19	NA	38991275	39006059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38991601_38998170_38998312_39000971_39001107_39003346_39003419_39004044
transcript_38352.nic	chr13	+	1333	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-97	4186	-6	-889	5prime_fragment	FALSE	canonical	3	46	junction_8	19.0718214914045	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGAATATTCTATGTGC	NA	False	NA	NA	False	CATAAA	-19	NA	44989522	45029416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_38355.nic	chr13	+	2222	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-97	3297	-6	0	5prime_fragment	FALSE	canonical	3	46	junction_8	19.0718214914045	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	NA	False	NA	26	True	AATAAA	-19	NA	44989522	45030305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_38356.nic	chr13	+	1528	9	NIC	ENSG00000133114.18	novel	4294	10	NA	NA	-6	-3	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	31.6889176211495	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTAGTATTTATTTT	NA	False	NA	15	True	AATAAA	-18	NA	44989522	45033608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45033235
transcript_38357.known	chr13	+	3410	8	FSM	ENSG00000133114.18	ENST00000361121.6	3410	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.0905889706014	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	9	True	NA	26	True	AATAAA	-19	NA	44989563	45030305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44989743_45004310_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
transcript_38367.nic	chr13	+	738	4	ISM	ENSG00000133114.18	ENST00000379151.9	3442	8	-15	21228	-6	7037	5prime_fragment	FALSE	canonical	3	93	junction_2	5.31245915016974	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCTGTTAGGAAAATAAC	NA	False	NA	NA	False	AATAAA	-20	NA	44989522	45009077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794
transcript_3837.known	chr1	+	1243	4	FSM	ENSG00000174574.16	ENST00000446189.6	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	1261.68943176291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTTAGGTTAATTCTT	11	True	NA	NA	False	NA	NA	NA	38991287	39004761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38991601_38998170_38998312_39003346_39003419_39004044
transcript_38373.known	chr13	+	466	2	FSM	ENSG00000133114.18	ENST00000479068.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCACAAGCTGACAGTTT	20	False	NA	NA	False	NA	NA	NA	44989614	45002040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44989743_45001702
transcript_38375.known	chr13	+	899	1	FSM	ENSG00000133114.18	ENST00000611650.1	899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTCATGCCTTTCTTT	NA	False	NA	7	True	AATAAA	-21	NA	44989528	44990427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44989500_44990400
transcript_38376.known	chr13	+	4294	10	FSM	ENSG00000133114.18	ENST00000497558.5	4294	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	31.5844937732676	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGAAGTTGTAGTATT	25	False	NA	9	True	AATAAA	-12	NA	44989619	45033602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238_45032108_45033235
transcript_38380.known	chr13	+	2228	8	FSM	ENSG00000188342.12	ENST00000340473.8	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	21.4998813475606	963	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCCCATTCCCCACTCC	5	True	NA	9	True	AATAAA	-17	NA	45120509	45284893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232_45267377_45283441
transcript_38427.known	chr13	-	801	5	FSM	ENSG00000133112.17	ENST00000529421.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1549.49846724674	4274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGGGACTGGAATATAAAA	811	False	NA	-90	True	NA	NA	NA	45340402	45337052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340351
transcript_38430.known	chr13	-	764	6	FSM	ENSG00000133112.17	ENST00000379060.8	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1387.9091324723	14391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGCATTTAAACTC	91	False	NA	6	True	AAGAAA	-25	NA	45341122	45337197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341037
transcript_38431.known	chr13	-	1101	5	FSM	ENSG00000133112.17	ENST00000379056.5	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	1505.11843387821	7701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAACTTTGTCTCAGCT	1	True	NA	-8	True	AATAAA	-18	NA	45341212	45336872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45341041
transcript_38432.known	chr13	-	731	4	FSM	ENSG00000133112.17	ENST00000528619.5	731	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1747.96815379076	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAATAAAAAGAGACTCAT	1680	False	NA	-34	True	NA	NA	NA	45339533	45336898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45337466_45337554_45338659_45338777_45339496
transcript_38433.known	chr13	-	530	3	FSM	ENSG00000133112.17	ENST00000530245.5	530	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1854.5	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAGAGAATGCCTTTTA	1680	False	NA	26	True	AATAAA	-15	NA	45339533	45337177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337554_45338659_45338777_45339496
transcript_38434.known	chr13	-	948	5	FSM	ENSG00000133112.17	ENST00000379055.5	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	2832	junction_4	397.494025112328	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGACTGATGTCATCT	55	False	NA	-98	True	NA	NA	NA	45341158	45337301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711
transcript_38436.known	chr13	-	3663	10	FSM	ENSG00000174032.17	ENST00000519676.6	3663	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	4.2889464590264	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGGTTATTTCAGA	-10	True	NA	98	True	AATAAA	-26	NA	45418373	45393315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45396016_45397257_45397339_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
transcript_38446.known	chr13	+	4555	23	FSM	ENSG00000136152.15	ENST00000349995.10	4555	23	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	10.8917475773751	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTCAGACTCACATGC	-8	True	NA	95	True	ATTAAA	-17	NA	45464938	45536701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45465211_45476200_45476348_45479004_45479067_45480124_45480291_45481229_45481305_45482380_45482474_45483229_45483356_45486494_45486576_45490914_45490959_45491411_45491539_45492158_45492251_45493346_45493487_45496151_45496313_45503243_45503350_45509691_45509817_45511764_45511855_45516142_45516264_45518761_45518851_45518959_45519095_45524975_45525052_45529790_45529919_45530681_45530781_45534701
transcript_38448.known	chr13	+	255	2	FSM	ENSG00000136152.15	ENST00000476702.1	255	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTCCAGTCTGTTT	59	False	NA	NA	False	AATAAA	-14	NA	45465063	45466624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45465211_45466516
transcript_38449.known	chr13	+	531	2	FSM	ENSG00000136152.15	ENST00000617325.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCCATGGGGGTCTT	13	False	NA	NA	False	NA	NA	NA	45464897	45465658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45465211_45465440
transcript_38450.known	chr13	+	530	1	FSM	ENSG00000136152.15	ENST00000618913.1	530	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCTCAGTACATTATTA	280	False	NA	NA	False	AATAAA	-19	NA	45465284	45465814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45465300_45465800
transcript_38452.known	chr13	+	4074	4	FSM	ENSG00000235903.10	ENST00000415033.3	4074	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGCCTGGCCAACAT	0	True	NA	NA	False	NA	NA	NA	46052818	46116576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_46052966_46094852_46095003_46098397_46098782_46113183
transcript_38455.known	chr13	+	3509	3	FSM	ENSG00000235903.10	ENST00000606991.6	3509	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAACTGCGTCTCTGAA	-1	True	NA	NA	False	ACTAAA	-6	NA	46052797	46101588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_46052966_46094852_46095003_46098397
transcript_38460.known	chr13	-	8024	19	FSM	ENSG00000123200.17	ENST00000679008.1	8024	19	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_18	43.7051357266957	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGATCTTTCCATTT	-8	True	NA	-4	True	AATAAA	-18	NA	46052746	45954464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45957298_45959482_45959647_45963841_45964043_45965279_45965433_45967503_45968029_45968747_45969972_45970361_45970466_45975282_45975839_45979812_45980005_45985296_45985762_45988786_45989098_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_38487.nic	chr13	-	941	8	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-21	41058	-21	-2071	5prime_fragment	FALSE	canonical	3	49	junction_7	62.3525198744516	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAGTAAAAGACAGGAT	5605	False	NA	NA	False	AATACA	-9	NA	46052780	46003233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_38508.known	chr13	-	695	5	FSM	ENSG00000123200.17	ENST00000428921.1	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	108.063349476129	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTTCCCAAAACAAAGT	5700	False	NA	NA	False	AATACA	-32	NA	46052685	46042156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46042276_46044954_46045065_46045390_46045517_46051931_46051990_46052403
transcript_38509.known	chr13	-	3643	16	FSM	ENSG00000136167.15	ENST00000323076.7	3643	16	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_11	5.57215298505783	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTGTCTCTGGATGTTT	-3	True	NA	-9	True	AATAAA	-13	NA	46182177	46125922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46127724_46130813_46130939_46134126_46134251_46142291_46142426_46143289_46143405_46144441_46144521_46146907_46147104_46148351_46148448_46150935_46151079_46152779_46152946_46154804_46154887_46156437_46156571_46158521_46158652_46158825_46158990_46159598_46159687_46182110
transcript_38510.known	chr13	-	11050	15	FSM	ENSG00000102445.20	ENST00000429979.6	11050	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	5.40974177964614	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCAAGCTCCCCTGCCTA	-7	True	NA	NA	False	TATAAA	-25	NA	46387252	46334680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46377889_46378006_46387133
transcript_38511.known	chr13	-	2361	15	FSM	ENSG00000102445.20	ENST00000378784.8	2361	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	7.38586625983461	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	12	True	NA	-9	True	NA	NA	NA	46387233	46342963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372211_46377889_46378006_46387133
transcript_38514.known	chr13	-	3045	14	FSM	ENSG00000102445.20	ENST00000676051.1	3045	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	6.66617355178255	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCACAGATTGTCCCCTAA	8	True	NA	-28	True	AATAAA	-2	NA	46387457	46342255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372079_46387133
transcript_38515.known	chr13	-	1948	14	FSM	ENSG00000102445.20	ENST00000631139.2	1948	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	6.66617355178255	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAGATGGTCTATATT	-7	True	NA	NA	False	NA	NA	NA	46387252	46343279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372211_46387133
transcript_38516.nic	chr13	-	2670	14	NIC	ENSG00000102445.20	novel	11050	15	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_13	5.11986501301346	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	2900	False	NA	-9	True	NA	NA	NA	46387271	46342963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46387133
transcript_38519.known	chr13	-	3206	13	FSM	ENSG00000102445.20	ENST00000378797.6	3206	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_12	6.43072054024016	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCATTCTTGCCCAT	2671	False	NA	NA	False	AATAAA	-19	NA	46387500	46341999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46387133
transcript_38520.nnic	chr13	-	565	3	NIC	ENSG00000102445.20	novel	11293	17	NA	NA	-8	-13230	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGTGTACCAGACTGA	2911	False	NA	NA	False	AATAAA	-15	NA	46387260	46385170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_46385299_46386415_46386726_46387133
transcript_38523.known	chr13	-	830	5	FSM	ENSG00000231817.9	ENST00000648041.2	830	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACAGTCCAAGTTATTT	1047	False	NA	NA	False	AATAAA	-18	NA	46466816	46455131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46455512_46457839_46457914_46464735_46464820_46465903_46465988_46466608
transcript_38524.known	chr13	-	1184	7	FSM	ENSG00000231817.9	ENST00000669385.1	1184	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.21335164821342	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACAGTCCAAGTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	46467912	46455131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46455512_46457839_46457914_46460944_46461171_46464735_46464820_46465842_46465988_46466608_46466710_46467738
transcript_38525.known	chr13	+	4710	19	FSM	ENSG00000136141.15	ENST00000311191.10	4710	19	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_18	6.98521366004958	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGACTTA	-5	True	NA	7	True	ATTAAA	-18	NA	46553167	46753040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46750539
transcript_38527.nic	chr13	+	1108	2	ISM	ENSG00000136141.15	ENST00000443945.6	2070	13	-35	54881	-33	-38422	5prime_fragment	FALSE	canonical	3	51	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAAGCCTGGGTGAT	-3	True	NA	NA	False	NA	NA	NA	46553134	46650739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_46553704_46650200
transcript_38529.known	chr13	-	1079	11	FSM	ENSG00000139684.15	ENST00000378697.5	1079	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	197.997499984217	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAACATTGGATTTTAT	19	True	NA	-97	True	TATAAA	-44	NA	46797133	46771334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46790596_46790662_46791345_46791421_46793396_46793445_46797104
transcript_3853.known	chr1	+	495	3	FSM	ENSG00000168653.11	ENST00000372969.8	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	3429	junction_1	1351.5	42399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTATTTTCTCTTGG	14	True	NA	29	True	AATAAA	-17	NA	39026349	39034615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39026403_39028722_39028941_39034391
transcript_38533.known	chr13	-	1121	10	FSM	ENSG00000139684.15	ENST00000378720.8	1121	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	143.297239210782	2934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGATTTTAAAAGTTAT	-9	True	NA	-18	True	AATAAA	-14	NA	46797161	46771255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_3854.known	chr1	+	544	3	FSM	ENSG00000168653.11	ENST00000372967.3	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	2641	junction_1	1745.5	52768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGACTTTCTTTTCTTTT	-18	True	NA	50	True	AATAAA	-38	NA	39026317	39034636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39026399_39028722_39028941_39034391
transcript_38552.known	chr13	-	552	4	FSM	ENSG00000136143.16	ENST00000493152.6	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	425.01006524029	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGTGCAGACAAGTAAAG	NA	False	NA	NA	False	AATAAA	-26	NA	47949561	47936490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47936774_47943344_47943446_47948939_47949029_47949482
transcript_38553.known	chr13	-	2111	11	FSM	ENSG00000136143.16	ENST00000646932.1	2111	11	0	0	0	0	multi-exon	FALSE	canonical	3	853	junction_6	74.1012820401914	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	10	True	NA	-14	True	AATAAA	-16	NA	48001273	47942655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_38554.known	chr13	-	2201	12	FSM	ENSG00000136143.16	ENST00000643023.1	2201	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	359.353275843569	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTGGGTTCATGGCT	3395	False	NA	-19	True	AATAAA	-11	NA	48001305	47942660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47965577_47965641_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_38555.known	chr13	-	1118	6	FSM	ENSG00000136143.16	ENST00000646602.1	1118	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	367.279512088545	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGACTCATCTTTTCGT	-10	True	NA	NA	False	ATTAAA	-23	NA	48001293	47971452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47971884_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_38556.known	chr13	-	1079	6	FSM	ENSG00000136143.16	ENST00000644338.1	1079	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	366.48165029098	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGCTGTGGTCCTTCTTT	4	True	NA	-77	True	AATAGA	-34	NA	48001279	47971680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47972087_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_38557.known	chr13	-	1445	4	FSM	ENSG00000136143.16	ENST00000470760.2	1445	4	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_2	34.2669260690571	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGCAACTTTTAAT	10	True	NA	NA	False	ATTAAA	-22	NA	48001273	47987633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47988704_47988881_47988982_47996842_47997024_48001179
transcript_38558.known	chr13	-	446	1	FSM	ENSG00000229423.2	ENST00000424277.2	446	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACATGGATGGAGGTTT	NA	False	NA	NA	False	GGGGCT	-19	NA	47767085	47766639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47766600_47767100
transcript_38560.known	chr13	+	1938	3	FSM	ENSG00000136159.4	ENST00000258662.3	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_2	34.5	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTCATTTCTATAT	-5	True	NA	19	True	AATAAA	-16	NA	48037725	48047221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48037905_48040919_48041117_48045659
transcript_38561.nic	chr13	+	793	2	ISM	ENSG00000136159.4	ENST00000258662.3	1938	3	-31	5719	-31	-5719	5prime_fragment	FALSE	canonical	3	645	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTAGTCTGAAGTATT	-36	True	NA	8	True	AATAAA	-17	NA	48037694	48041502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_48037905_48040919
transcript_38567.known	chr13	-	911	8	FSM	ENSG00000136146.15	ENST00000417167.2	911	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	463.561941351302	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTCAAGCAGTAGTAGT	44	False	NA	-71	True	AATAAA	-35	NA	48095068	48077170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48093547_48093688_48094953
transcript_3857.known	chr1	+	4338	32	FSM	ENSG00000127603.32	ENST00000524432.5	4338	32	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_30	8.96832209773374	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGACAGTTGGGTCCAA	11	True	NA	NA	False	AATACA	-36	NA	39105410	39323008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39105718_39231181_39231244_39250013_39250104_39254297_39254376_39257935_39258029_39282207_39282375_39283188_39283302_39283408_39283516_39284065_39284186_39284332_39284429_39285082_39285211_39285296_39285391_39285603_39285759_39287285_39287563_39291909_39292039_39292765_39292844_39293457_39293620_39295045_39295151_39295786_39295883_39297619_39297746_39300209_39300363_39302923_39303079_39309569_39309697_39310244_39310429_39310830_39311001_39315512_39315692_39316390_39316530_39317213_39317408_39318452_39318616_39319663_39319748_39322607_39322716_39322909
transcript_38572.known	chr13	-	931	7	FSM	ENSG00000136146.15	ENST00000378586.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_6	315.445936554727	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATAGTTTTAGTTTTA	NA	False	NA	NA	False	ATTAAA	-35	NA	48095131	48076967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48095059
transcript_38582.known	chr13	-	2254	7	FSM	ENSG00000136146.15	ENST00000258648.7	2254	7	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_6	57.8983784075359	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGGTATGTGCCA	8	True	NA	NA	False	NA	NA	NA	48095104	48075723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
transcript_38585.known	chr13	+	1098	6	FSM	ENSG00000136156.15	ENST00000648898.1	1098	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	537.00294226382	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGACTTATTTGTAGT	372	False	NA	NA	False	NA	NA	NA	48233598	48261591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48233646_48253807_48253937_48256176_48256384_48258125_48258237_48258796_48258948_48261138
transcript_38586.known	chr13	+	1422	6	FSM	ENSG00000136156.15	ENST00000649266.1	1422	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	537.00294226382	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTGTTGTTTTTCCCGT	NA	False	NA	31	True	TATAAA	-24	NA	48232611	48261875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48232699_48253807_48253937_48256176_48256384_48258125_48258237_48258796_48258948_48261138
transcript_38588.known	chr13	-	220	2	ISM	ENSG00000231473.4	ENST00000436963.2	777	3	17	5748	17	-5748	5prime_fragment	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTTATGCTGTGAATAAA	979	False	NA	NA	False	NA	NA	NA	48303659	48302446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_48302493_48303485
transcript_38589.known	chr13	-	1143	3	FSM	ENSG00000231473.4	ENST00000433480.3	1199	3	41	15	15	-15	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGCCAACTAAACTTAA	977	False	NA	NA	False	TTTAAA	-10	NA	48303661	48296512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48297131_48302338_48302493_48303290
transcript_3859.known	chr1	-	2082	16	FSM	ENSG00000090621.15	ENST00000678625.1	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	150.36039667708	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	22	True	NA	18	True	NA	NA	NA	39575786	39560856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_38592.known	chr13	-	534	2	FSM	ENSG00000139679.16	ENST00000482024.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATTTTTGTACATT	625	False	NA	NA	False	AATAAA	-16	NA	48412489	48411740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48412206_48412420
transcript_38593.known	chr13	-	3075	15	FSM	ENSG00000136161.13	ENST00000344532.8	3075	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	8.40917865872082	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGGGGTTTTTT	1	True	NA	NA	False	AATAAA	-24	NA	48533080	48488962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48521897_48521963_48522307_48522404_48524658_48524758_48533027
transcript_38599.known	chr13	-	2984	12	FSM	ENSG00000136161.13	ENST00000544904.3	2984	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	5.7265511810995	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	2639	False	NA	NA	False	AATAAA	-17	NA	48533256	48488969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
transcript_38607.known	chr13	+	700	1	FSM	ENSG00000225131.2	ENST00000453033.1	700	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCAGGACTAGAAGGAA	31	False	NA	NA	False	NA	NA	NA	48771127	48771827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48771100_48771800
transcript_38608.known	chr13	+	5714	24	FSM	ENSG00000102531.16	ENST00000398316.7	5714	24	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	27.0079453407917	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACGTTTATTGTATTCAT	-33	True	NA	18	True	AATAAA	-21	NA	49110312	49209593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49110407_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_3861.known	chr1	-	3048	16	FSM	ENSG00000090621.15	ENST00000372857.7	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_6	119.398194663441	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	162	False	NA	-10	True	AATAAA	-21	NA	39576744	39560815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_38613.known	chr13	+	6328	26	FSM	ENSG00000102531.16	ENST00000541916.5	6328	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	29.6911030445149	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTTGATTTTGTGCAA	-25	True	NA	13	True	AATAAA	-18	NA	48976608	49209778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48976918_49006151_49006290_49075288_49075365_49114654_49114732_49131136_49131375_49136331_49136602_49138746_49138806_49145777_49145936_49167243_49167304_49168612_49168752_49172042_49172097_49174434_49174560_49175366_49175542_49178567_49178655_49185963_49186103_49187121_49187191_49188514_49188634_49191014_49191121_49191208_49191385_49196876_49196991_49197724_49197875_49197981_49198266_49198361_49198575_49201799_49201967_49203156_49203285_49207080
transcript_38628.nic	chr13	+	1203	5	NIC	ENSG00000102543.14	novel	677	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	19.9812412026881	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	-17	True	NA	9	True	AATAAA	-17	NA	49247910	49267785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_49248470_49248870_49248966_49255838_49255914_49259345_49259524_49267489
transcript_3863.known	chr1	-	2122	15	FSM	ENSG00000090621.15	ENST00000677609.1	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	185.470293017067	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	993	False	NA	18	True	NA	NA	NA	39575913	39560856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_38631.known	chr13	+	3386	10	FSM	ENSG00000102543.14	ENST00000251108.10	3386	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	21.7704069159019	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGCCTCAGAAGGTG	-3	True	NA	3	True	AATAAA	-18	NA	49247924	49293485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489_49268060_49274290_49274341_49278349_49278520_49280508_49280699_49286221_49286283_49291683
transcript_38632.known	chr13	+	677	5	FSM	ENSG00000102543.14	ENST00000466868.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	18.7416648139913	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	19	True	NA	9	True	AATAAA	-17	NA	49247946	49267785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49267489
transcript_38633.known	chr13	+	688	6	FSM	ENSG00000102543.14	ENST00000496061.5	688	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	23.3015020975044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATAAGTTTGCTTACG	13	True	NA	NA	False	NA	NA	NA	49247940	49267525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49265878_49266004_49267489
transcript_38635.known	chr13	-	3502	11	FSM	ENSG00000102547.19	ENST00000409308.6	3502	11	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_2	4.62168800331654	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTTGGTTTCATTC	-24	True	NA	-21	True	AATAAA	-13	NA	49444064	49308649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49433317_49433394_49434085_49434224_49443985
transcript_38640.nnic	chr13	-	571	2	NNC	ENSG00000102547.19	novel	3502	11	NA	NA	-52	-40849	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTGTAATTTTGTTCT	7	True	NA	NA	False	AATAGA	-22	NA	49444116	49442344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_49442785_49443985
transcript_38642.known	chr13	+	6139	15	FSM	ENSG00000136169.17	ENST00000354234.8	6139	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	15.9303330223847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGATCGGCTAATTCTG	2	True	NA	9	True	AATAAA	-22	NA	49444373	49495003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49464020_49464057_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_38653.known	chr13	+	574	2	FSM	ENSG00000136169.17	ENST00000481439.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTATGGCCGTGCGCGGTGG	216	False	NA	NA	False	NA	NA	NA	49444683	49445952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49444858_49445552
transcript_38655.known	chr13	+	1471	11	FSM	ENSG00000136147.18	ENST00000357596.7	1471	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	17.9691402131543	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTACCAAATTTGCCTGT	-4	True	NA	18	True	AATAAA	-20	NA	49496391	49528981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49496483_49497055_49497218_49506634_49506757_49513058_49513167_49518017_49518152_49520893_49520941_49522042_49522108_49523174_49523242_49524084_49524217_49526386_49526459_49528510
transcript_38657.known	chr13	+	903	9	FSM	ENSG00000136147.18	ENST00000426879.5	903	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	15.0083310198036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTCAAAACCAGAGACCA	38	False	NA	NA	False	NA	NA	NA	49496015	49528708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49496096_49513058_49513167_49518017_49518152_49520893_49520941_49522042_49522108_49523174_49523242_49524084_49524217_49526386_49526459_49528510
transcript_38658.known	chr13	+	1626	12	FSM	ENSG00000136147.18	ENST00000465045.5	1626	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	21.4834166296389	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTTGTACCAAATTTG	1	True	NA	13	True	AATAAA	-15	NA	49496396	49528976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49496483_49497055_49497218_49506634_49506757_49513058_49513167_49518017_49518152_49520893_49520941_49522042_49522108_49523174_49523242_49524084_49524217_49525772_49525938_49526386_49526459_49528510
transcript_3866.known	chr1	-	2470	15	FSM	ENSG00000090621.15	ENST00000372862.7	2470	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	156.564389831358	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	653	False	NA	-10	True	AATAAA	-21	NA	39576253	39560815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_38662.known	chr13	-	4008	13	FSM	ENSG00000136144.12	ENST00000378302.7	4008	13	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	27.0102861065105	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGAGTTGTTTTTTTC	0	True	NA	-5	True	AATAAA	-21	NA	49585558	49531945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49580504_49580585_49585443
transcript_38664.known	chr13	+	3552	2	FSM	ENSG00000152213.4	ENST00000282026.2	3552	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGCTCATTTCCTTGC	-5	True	NA	NA	False	NA	NA	NA	49628506	49633872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49628616_49630429
transcript_38669.known	chr13	-	1026	5	FSM	ENSG00000123179.14	ENST00000495963.2	1026	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	544.308965570107	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	6	True	NA	-19	True	AATAAA	-19	NA	49691463	49660722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49686474_49686596_49691253
transcript_38671.known	chr13	-	977	4	FSM	ENSG00000123179.14	ENST00000242827.11	977	4	0	0	0	0	multi-exon	TRUE	canonical	3	1016	junction_2	71.1071179434395	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCAGTGTTATATTAAT	-17	True	NA	30	True	AGTAAA	-17	NA	49691486	49660673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49691253
transcript_38673.known	chr13	-	810	3	FSM	ENSG00000123179.14	ENST00000473576.6	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	510.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	31	True	NA	-19	True	AATAAA	-19	NA	49691438	49660722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49663056_49663196_49691253
transcript_38674.known	chr13	-	766	3	FSM	ENSG00000123179.14	ENST00000378272.9	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	502.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	6	True	NA	-19	True	AATAAA	-19	NA	49691463	49660722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49669776_49669847_49691253
transcript_38677.known	chr13	-	4222	17	FSM	ENSG00000102753.10	ENST00000261667.8	4222	17	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_1	27.8340506394596	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAACTTATTTCTGA	1	True	NA	-48	True	AATAAA	-27	NA	49792682	49699319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
transcript_3869.known	chr1	-	1011	7	FSM	ENSG00000090621.15	ENST00000678028.1	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	214.112639099662	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	NA	False	NA	-10	True	AATAAA	-21	NA	39564813	39560815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564685
transcript_38691.known	chr13	+	422	1	FSM	ENSG00000276436.1	ENST00000615830.1	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTACATGTGTATGTATG	NA	False	NA	NA	False	TATAAA	-17	NA	49792885	49793307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49792900_49793300
transcript_3870.known	chr1	-	4077	5	FSM	ENSG00000163909.8	ENST00000372852.4	4077	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	6.53834841531101	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAGGTGAGATATCTT	-3	True	NA	-3	True	AATAAA	-20	NA	39639643	39623434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39639545
transcript_38701.known	chr13	-	3086	4	FSM	ENSG00000123178.15	ENST00000378195.6	3086	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	51.6161042914149	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGATGTTATCTACCTC	9	True	NA	-11	True	ATTAAA	-20	NA	49936490	49912705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49936129
transcript_38709.known	chr13	-	1072	7	FSM	ENSG00000231607.14	ENST00000668305.1	1072	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.8410349192442	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATGGACTTGTCTGGT	-3	True	NA	NA	False	ATTAAA	-16	NA	50082003	50027089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50027407_50029277_50029493_50044650_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
transcript_38710.known	chr13	-	705	6	FSM	ENSG00000231607.14	ENST00000443587.6	1734	6	19	1010	16	209	multi-exon	FALSE	canonical	0	0	junction_3	20.0897984061563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACCCTTTTAATGAAG	28	True	NA	NA	False	NA	NA	NA	50081972	50044514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50070581_50070642_50075558_50075654_50081822
transcript_38711.known	chr13	-	569	6	FSM	ENSG00000231607.14	ENST00000659339.1	569	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.0897984061563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTATTTCTCATTGAATA	9	True	NA	NA	False	AAAAAG	-12	NA	50081991	50044723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50071515_50071630_50075558_50075654_50081822
transcript_38714.known	chr13	-	1737	5	FSM	ENSG00000231607.14	ENST00000458725.7	1806	5	12	57	0	13	multi-exon	FALSE	canonical	3	35	junction_2	6.57647321898295	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTACTGTTTAGGTA	NA	False	NA	NA	False	ATTAAA	-37	NA	50082041	50043491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
transcript_38719.known	chr13	-	1267	7	FSM	ENSG00000231607.14	ENST00000425586.5	1267	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.855586623714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCCTGCATGCTTGT	5184	False	NA	NA	False	AGTAAA	-18	NA	50125720	50027132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50027407_50029277_50029493_50044650_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50125301
transcript_38722.known	chr13	-	1208	4	FSM	ENSG00000231607.14	ENST00000433070.7	1208	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	17.1075032271418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCCAGAGTTTGCCTGT	-23	True	NA	-7	True	ATTAAA	-33	NA	50082023	50043907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50081822
transcript_38726.known	chr13	-	855	4	FSM	ENSG00000231607.14	ENST00000449579.2	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	6.64997911442	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCACATAATGGTTTG	NA	False	NA	NA	False	AATAAA	-15	NA	50082041	50049188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50049663_50068096_50068164_50075558_50075654_50081822
transcript_38728.known	chr13	-	740	3	FSM	ENSG00000231607.14	ENST00000658343.1	740	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAAGCCAGGAGAGAAA	7	False	NA	NA	False	NA	NA	NA	49997136	49975946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49976455_49993792_49993962_49997073
transcript_38729.nnic	chr13	+	979	3	NIC	ENSG00000204977.10	novel	478	3	NA	NA	0	439	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	33.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTTTCAGCATTTA	-17	True	NA	15	True	AATAAA	-28	NA	49997041	50020920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_49997217_49997666_49997764_50020213
transcript_38733.known	chr13	-	692	3	FSM	ENSG00000231607.14	ENST00000421758.6	710	3	18	0	15	0	multi-exon	FALSE	canonical	3	7	junction_2	14	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCACATAATGGTTTG	27	True	NA	NA	False	AATAAA	-15	NA	50081973	50049188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50049663_50068096_50068164_50081822
transcript_38735.known	chr13	-	1963	2	FSM	ENSG00000231607.14	ENST00000656688.1	1963	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTGTGTGATAAATGT	NA	False	NA	NA	False	NA	NA	NA	49998785	49993710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49993962_49997073
transcript_38741.known	chr13	+	1489	3	FSM	ENSG00000204977.10	ENST00000457662.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	104	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAAGTATGCAGTTTT	0	True	NA	9	True	TATAAA	-14	NA	49997058	50013168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997217_49997666_49997764_50011934
transcript_38743.known	chr13	+	2607	3	FSM	ENSG00000204977.10	ENST00000420995.6	2607	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	59	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	245	False	NA	NA	False	NA	NA	NA	49997018	50014331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997132_49997666_49997764_50011934
transcript_38744.known	chr13	+	478	3	FSM	ENSG00000204977.10	ENST00000478111.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	78.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATTTTTCTTGTTTCA	245	False	NA	NA	False	GATAAA	-35	NA	49997018	50020481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997132_49997666_49997764_50020213
transcript_38746.known	chr13	+	1623	3	FSM	ENSG00000198553.9	ENST00000360473.8	1623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTTTCAGCATTTA	84	False	NA	15	True	AATAAA	-28	NA	50015253	50020920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50016072_50018822_50018921_50020213
transcript_38748.known	chr13	+	1337	2	FSM	ENSG00000198553.9	ENST00000312942.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCAGCATTTATT	0	True	NA	17	True	AATAAA	-30	NA	50015443	50020922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50016072_50020213
transcript_38749.known	chr13	+	7255	2	FSM	ENSG00000204977.10	ENST00000378182.4	7255	2	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	-17	True	NA	16	True	AATAAA	-17	NA	49997041	50018467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997764_50011934
transcript_3875.known	chr1	+	4339	10	FSM	ENSG00000084072.17	ENST00000324379.10	4339	10	0	0	0	0	multi-exon	TRUE	canonical	3	622	junction_1	65.9951363714885	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTTTATTTGACTTG	-1	True	NA	NA	False	AATAAA	-17	NA	39738881	39756769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_38754.known	chr13	+	2957	3	FSM	ENSG00000176124.15	ENST00000469754.3	2957	3	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	2	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTATTTGAAGCA	1870	False	NA	15	True	AATAAA	-21	NA	50082168	50107218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50082558_50083141_50083195_50104703
transcript_38759.known	chr13	+	2888	2	FSM	ENSG00000176124.15	ENST00000655550.1	2888	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTTTCACTATTAACT	1870	False	NA	-1	True	AATAAA	-5	NA	50082168	50107202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50082558_50104703
transcript_3876.known	chr1	+	1198	11	FSM	ENSG00000084072.17	ENST00000372830.5	1198	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	300.769828939008	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	18	False	NA	10	True	AATAAA	-18	NA	39738900	39763914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39762516_39762652_39763688
transcript_38760.known	chr13	-	354	1	FSM	ENSG00000223676.1	ENST00000445636.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAACTTATTAACAA	33	False	NA	NA	False	NA	NA	NA	50361763	50361409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50361400_50361800
transcript_38763.known	chr13	-	1121	2	FSM	ENSG00000186047.11	ENST00000504404.2	1121	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGAATGAATGAGATATT	1	True	NA	NA	False	ATTAAA	-22	NA	50843692	50822904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50823521_50843187
transcript_38769.known	chr13	+	1428	11	FSM	ENSG00000136104.21	ENST00000644297.1	1428	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	183.082740857788	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAGTGTATGACTGCTT	27	False	NA	4	True	AATAAA	-16	NA	50909879	50956761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50910141_50927406_50927479_50929460_50929583_50930682_50930760_50934884_50935000_50943329_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_3877.known	chr1	+	1213	10	FSM	ENSG00000084072.17	ENST00000475350.5	1213	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	278.763938366018	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	25	False	NA	30	True	AATAAA	-30	NA	39738907	39753716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745413_39745499_39748902_39749089_39752909_39753053_39753286
transcript_38771.known	chr13	+	1257	11	FSM	ENSG00000136104.21	ENST00000611510.5	1257	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	139.903573935765	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAATTTCATGTTCTCT	105	False	NA	87	True	NA	NA	NA	50910154	50956572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50910439_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_38773.nic	chr13	+	1151	11	NIC	ENSG00000136104.21	novel	2155	16	NA	NA	38	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	140.765194561724	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTTTACATGTTTCA	262	False	NA	18	True	AATAAA	-15	NA	50910311	50956503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_50910559_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_38776.known	chr13	+	1044	10	FSM	ENSG00000136104.21	ENST00000644518.1	1044	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	196.160931663548	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCCTTGAGAATGTAAAAT	0	True	NA	NA	False	NA	NA	NA	50909999	50950237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50910141_50927406_50927479_50929460_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50950025
transcript_38779.known	chr13	+	1567	10	FSM	ENSG00000136104.21	ENST00000646731.1	1567	10	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_5	188.766169285353	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTTGTCCAGTATGTG	-5	True	NA	4	True	ATTAAA	-17	NA	50909767	50970457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50910141_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943329_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50969931
transcript_3878.known	chr1	+	1079	10	FSM	ENSG00000084072.17	ENST00000356511.6	1079	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	238.685494808752	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	2	True	NA	10	True	AATAAA	-18	NA	39738884	39763914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39763688
transcript_38782.known	chr13	+	1407	10	FSM	ENSG00000136104.21	ENST00000642454.1	1407	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	189.264919825474	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGATTTGTCCAGTAT	182	False	NA	1	True	ATTAAA	-14	NA	50910231	50970454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50910439_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50969931
transcript_3879.known	chr1	+	2564	9	FSM	ENSG00000084072.17	ENST00000482751.5	2564	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	224.641902536014	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	7	True	NA	30	True	AATAAA	-30	NA	39738889	39753716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_38791.known	chr13	-	1007	3	FSM	ENSG00000233672.9	ENST00000454605.5	1007	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCCTTAAAAAGGAAATT	1286	False	NA	NA	False	AATAAA	-35	NA	50910764	50882047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50882646_50889608_50889736_50910482
transcript_38792.known	chr13	-	3619	3	FSM	ENSG00000233672.9	ENST00000673853.1	3619	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATGGCATAATTCAGG	1472	False	NA	NA	False	AATAAA	-4	NA	50910578	50879265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50882646_50904720_50904864_50910482
transcript_38803.known	chr13	-	800	5	FSM	ENSG00000226792.8	ENST00000433280.6	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	37.3589012151053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTGGTAGAGTTGAAA	962	False	NA	NA	False	NA	NA	NA	51172388	51084080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51113192_51113223_51172252
transcript_38828.known	chr13	-	826	4	FSM	ENSG00000226792.8	ENST00000569306.1	826	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.3245605355165	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTCCCTGAGAAGC	1128	False	NA	NA	False	NA	NA	NA	51172222	51084123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51171987
transcript_38829.nnic	chr13	-	3188	4	NIC	ENSG00000226792.8	novel	3075	4	NA	NA	-456	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	31.1804782231162	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGACAGATTCTTT	506	False	NA	-1	True	AATAAA	-20	NA	51172844	51082118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_51084326_51085318_51085560_51087927_51088076_51172252
transcript_3883.known	chr1	-	5051	11	FSM	ENSG00000043514.17	ENST00000316891.10	5051	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	49.2301736742823	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAGACTCAACAATAC	-4	True	NA	NA	False	NA	NA	NA	39883504	39838109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_38835.nnic	chr13	+	608	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_2	21.5	104	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	29	False	NA	14	True	ATTAAA	-21	NA	51170066	51176077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172316_51172400_51175948
transcript_38838.nnic	chr13	+	2207	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	32	3940	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	270	False	NA	14	True	ATTAAA	-21	NA	51169889	51176077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172316_51172419_51174545
transcript_38846.nnic	chr13	+	520	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	35	junction_2	3	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	0	True	NA	14	True	ATTAAA	-21	NA	51170211	51176077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172259_51172400_51175948
transcript_38849.nnic	chr13	+	2123	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	13.5	3917	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	-7	True	NA	14	True	ATTAAA	-21	NA	51170030	51176077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172259_51172419_51174545
transcript_38857.nnic	chr13	+	2412	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	175	junction_1	0	4418	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	21	False	NA	14	True	ATTAAA	-21	NA	51169582	51176077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51174545
transcript_38859.nnic	chr13	+	982	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	151	junction_1	0	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	48	False	NA	14	True	ATTAAA	-21	NA	51169609	51176077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51175948
transcript_38861.nnic	chr13	+	2371	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	3939	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	1	True	NA	14	True	ATTAAA	-21	NA	51169620	51176077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170467_51174552
transcript_38863.nnic	chr13	+	2093	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_1	0	57	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCATCCCTACTATTTT	-2	True	NA	39	True	NA	NA	NA	51170035	51173982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172316
transcript_38870.nnic	chr13	+	1136	4	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-9963	0	multi-exon	FALSE	canonical	3	25	junction_2	27.3536509852382	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	3	False	NA	5	True	AATAAA	-14	NA	51170214	51180967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr13_+_51170463_51172316_51172419_51175948_51176044_51180276
transcript_38872.nnic	chr13	+	1125	3	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-10105	0	multi-exon	FALSE	canonical	0	0	junction_2	75.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	35	False	NA	5	True	AATAAA	-14	NA	51170072	51180967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr13_+_51170463_51175948_51175993_51180276
transcript_38873.nnic	chr13	+	1665	3	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-10594	0	multi-exon	FALSE	canonical	3	87	junction_2	32	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	22	False	NA	5	True	AATAAA	-14	NA	51169583	51180967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr13_+_51170463_51175948_51176044_51180276
transcript_38875.known	chr13	+	790	1	FSM	ENSG00000274652.1	ENST00000614264.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	9054	False	NA	5	True	AATAAA	-14	NA	51180177	51180967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51180200_51181000
transcript_3888.nic	chr1	-	2010	10	NIC	ENSG00000043514.17	novel	5051	11	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	60.1315430463563	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	NA	False	NA	-27	True	AATAAA	-17	NA	39883550	39841050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854069_39857276_39857418_39883317
transcript_38880.known	chr13	-	7350	18	FSM	ENSG00000102786.15	ENST00000311234.9	7350	18	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_14	23.2367088176919	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGAATTATTTTTATG	-2	True	NA	-7	True	AATAAA	-18	NA	51453036	51361576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_38883.known	chr13	-	15428	3	FSM	ENSG00000102786.15	ENST00000442263.4	15428	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGTCGTGTAACGGAG	19	False	NA	NA	False	AATAAA	-14	NA	51453015	51436425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51451175_51451977_51452056_51452414
transcript_38887.known	chr13	+	918	3	FSM	ENSG00000236778.8	ENST00000594604.5	918	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTCCATGTTCTTTTA	801	False	NA	NA	False	AATAAA	-34	NA	51454163	51469423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51454330_51468267_51468368_51468771
transcript_38888.known	chr13	+	906	2	FSM	ENSG00000236778.8	ENST00000598905.1	906	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCAAGGTTTCAGCTT	-22	True	NA	NA	False	AATAAA	-30	NA	51453340	51454830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51453419_51454002
transcript_38889.known	chr13	+	807	2	FSM	ENSG00000224892.6	ENST00000595905.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCCCAGGGTGACAT	801	False	NA	NA	False	NA	NA	NA	51454163	51461312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51454330_51460671
transcript_38890.known	chr13	+	9369	12	FSM	ENSG00000139668.9	ENST00000298125.7	9369	12	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_8	28.3563510457199	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTCCCTTGGTTATGCT	8	True	NA	NA	False	ATTAAA	-18	NA	51584461	51767709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51755357_51755460_51756331_51756463_51758191_51758301_51759739
transcript_38896.known	chr13	+	6932	2	FSM	ENSG00000139668.9	ENST00000612477.1	6932	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GACAAAAATAAATAAAATAA	1	True	NA	NA	False	NA	NA	NA	51584454	51592586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51584825_51586024
transcript_38902.known	chr13	-	1199	10	FSM	ENSG00000102796.12	ENST00000682342.1	1199	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	24.5195814920078	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	0	True	NA	-12	True	AATAAA	-32	NA	51804162	51767994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_38905.known	chr13	-	1119	9	FSM	ENSG00000102796.12	ENST00000444610.8	1119	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	27.5836795043736	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	-1	True	NA	-10	True	AATAAA	-34	NA	51804163	51767992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_3891.known	chr1	-	2034	10	FSM	ENSG00000043514.17	ENST00000372818.5	2034	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.7127490139676	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-6	True	NA	-27	True	AATAAA	-17	NA	39883506	39841050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_38922.known	chr13	-	1324	8	FSM	ENSG00000102796.12	ENST00000280056.6	1324	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	35.9262282678132	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAGTACATGCCTCAT	20	True	NA	-9	True	ATTAAA	-17	NA	51804098	51770783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51771496_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_38924.nic	chr13	-	957	8	NIC	ENSG00000102796.12	novel	561	5	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	31.8568225480374	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAGATGGAGTTCTTT	NA	False	NA	-1	True	AATAAA	-20	NA	51804183	51772765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_38934.known	chr13	-	671	7	FSM	ENSG00000102796.12	ENST00000490949.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	26.5670012525982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCATAGCCTTTAATT	5	True	NA	NA	False	NA	NA	NA	51804157	51771820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_38936.nic	chr13	-	874	7	NIC	ENSG00000102796.12	novel	487	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	36.0589794642056	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAGATGGAGTTCTTT	NA	False	NA	-1	True	AATAAA	-20	NA	51804183	51772765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_3894.known	chr1	-	1851	9	FSM	ENSG00000043514.17	ENST00000441669.6	1851	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	66.2382064974588	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	9	True	NA	-27	True	AATAAA	-17	NA	39883491	39841050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848092_39850118_39850262_39852730_39852877_39883317
transcript_38946.nnic	chr13	-	941	6	NNC	ENSG00000102796.12	novel	561	5	NA	NA	-20	668	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	38.9224870736699	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTTTAGTCTCCTTG	NA	False	NA	NA	False	ACTAAA	-18	NA	51804183	51789354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_51789774_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_38948.nnic	chr13	-	858	5	NNC	ENSG00000102796.12	novel	561	5	NA	NA	-20	668	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	45.403744338986	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTTTAGTCTCCTTG	NA	False	NA	NA	False	ACTAAA	-18	NA	51804183	51789354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_51789774_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_38949.nic	chr13	-	487	4	ISM	ENSG00000102796.12	ENST00000682342.1	1199	10	-21	23123	-20	-1095	5prime_fragment	FALSE	canonical	3	64	junction_1	28.8559641437722	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCGTCTGTGGATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	51804183	51791117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_51791258_51797825_51797909_51799533_51799668_51804053
transcript_38951.nic	chr13	-	404	3	ISM	ENSG00000102796.12	ENST00000490949.5	671	7	-26	19297	-20	-1095	5prime_fragment	FALSE	canonical	3	48	junction_1	41.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCGTCTGTGGATGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	51804183	51791117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_51791258_51799533_51799668_51804053
transcript_38953.known	chr13	+	1793	1	FSM	ENSG00000231856.3	ENST00000618844.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAGTTTCATACAAAGTG	-4	True	NA	7	True	ATTAAA	-18	NA	51803837	51805630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51803800_51805600
transcript_38954.known	chr13	-	1970	8	FSM	ENSG00000102796.12	ENST00000218981.5	1970	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	26.8586625709852	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	5	True	NA	-12	True	AATAAA	-32	NA	51804157	51767994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_38956.nnic	chr13	-	2217	15	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_14	43.4816991763812	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-4	True	NA	-7	True	ATTAAA	-16	NA	52159860	52132646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52159542
transcript_38965.known	chr13	+	6504	5	FSM	ENSG00000253710.5	ENST00000679359.1	6504	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	77.8279352160906	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	8	True	NA	-29	True	NA	NA	NA	52012410	52033540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019144_52023712_52023780_52024005_52024938_52028318
transcript_38970.known	chr13	+	6454	4	FSM	ENSG00000253710.5	ENST00000681047.1	6454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	82.8130424510536	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	-5	True	NA	-29	True	NA	NA	NA	52012397	52033540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019148_52024005_52024938_52028318
transcript_38975.known	chr13	+	1004	4	FSM	ENSG00000253710.5	ENST00000650049.2	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	79.9874990232849	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTTAGAAAACAGACAAAA	10	True	NA	71	True	NA	NA	NA	52012412	52028689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019144_52024585_52024938_52028318
transcript_38978.nic	chr13	+	1362	3	ISM	ENSG00000253710.5	ENST00000649340.2	5097	4	-196	7315	-189	-3814	5prime_fragment	FALSE	canonical	3	166	junction_2	2.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATTTGTCTGAAGCAA	487	False	NA	7	True	AATAAA	-22	NA	52012201	52024875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_52012463_52018912_52019144_52024005
transcript_3898.known	chr1	-	1156	8	FSM	ENSG00000043514.17	ENST00000495175.6	1156	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	49.0347648435812	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCACCATTTTCTTTTG	-11	True	NA	NA	False	NA	NA	NA	39883511	39841625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39883317
transcript_38980.known	chr13	+	1520	3	FSM	ENSG00000253710.5	ENST00000681145.1	1520	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCACAAAGTCGTGAAGAA	8	True	NA	NA	False	AGTAAA	-4	NA	52012410	52029554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019148_52028321
transcript_38983.known	chr13	+	6219	3	FSM	ENSG00000253710.5	ENST00000681053.1	6219	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	-5	True	NA	-29	True	NA	NA	NA	52012397	52033540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52024005_52024938_52028318
transcript_38989.known	chr13	+	1404	2	FSM	ENSG00000253710.5	ENST00000523764.1	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGCCAGAATGATG	-5	True	NA	NA	False	AAGAAA	-10	NA	52012397	52029657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52028318
transcript_38991.known	chr13	+	1983	2	FSM	ENSG00000253710.5	ENST00000616513.1	1983	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTTGGGTACGTCTTT	8	True	NA	18	True	ATTAAA	-14	NA	52012410	52017713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52015782
transcript_38993.known	chr13	-	733	2	FSM	ENSG00000136098.17	ENST00000550331.1	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTAATGTGTGCAGTTTTT	NA	False	NA	-5	True	ATTAAA	-18	NA	52133839	52132644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52133227_52133688
transcript_38994.known	chr13	-	2345	15	FSM	ENSG00000136098.17	ENST00000611833.4	2345	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	43.661733116947	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGTGTGCAGTTTTTCA	-5	True	NA	-3	True	ATTAAA	-20	NA	52159861	52132642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143915_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_38995.known	chr13	-	2128	16	FSM	ENSG00000136098.17	ENST00000610828.5	2128	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	25.9883734688332	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-5	True	NA	-7	True	ATTAAA	-16	NA	52159597	52132646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_38997.nnic	chr13	-	758	4	NNC	ENSG00000272281.6	novel	2113	22	NA	NA	-1046	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.69967317119759	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52236326	52219343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_52219631_52223238_52223332_52227004_52227097_52236040
transcript_38999.known	chr13	-	4425	14	FSM	ENSG00000136100.14	ENST00000378060.9	4425	14	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_8	28.2641806059444	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGTGAGCAGTT	-2	True	NA	-4	True	AATAAA	-24	NA	52450634	52412605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_39.known	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00092_+_0_1100
transcript_390.known	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8723.12040810632	7685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_39007.nnic	chr13	-	866	10	NNC	ENSG00000136100.14	novel	614	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.4900413049752	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAATTTTCTAAGT	-24	True	NA	NA	False	ATTAAA	-21	NA	52450656	52425769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_52425800_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_3901.nnic	chr1	-	1593	7	NIC	ENSG00000043514.17	novel	1156	8	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_6	58.1081367413855	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	NA	False	NA	-27	True	AATAAA	-17	NA	39883516	39841050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39883317
transcript_39010.nic	chr13	-	566	6	ISM	ENSG00000136100.14	ENST00000378060.9	4425	14	-22	21080	-22	1152	5prime_fragment	FALSE	canonical	3	210	junction_4	23.1222836242444	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACTGACAAAAACATTTC	-24	True	NA	NA	False	AAAAAG	-5	NA	52450656	52433685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_39017.known	chr13	-	557	1	FSM	ENSG00000278238.1	ENST00000614364.1	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGTGTTTGTGTGGTT	6	True	NA	-1	True	GATAAA	-18	NA	52455331	52454774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52454800_52455300
transcript_39018.known	chr13	+	3614	9	FSM	ENSG00000136108.15	ENST00000258607.10	3614	9	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_2	70.2316479587372	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGCTTTTTAATATCT	3	True	NA	20	True	AATAAA	-18	NA	52455477	52476627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_39021.known	chr13	+	3395	9	FSM	ENSG00000136108.15	ENST00000490903.5	3395	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	219.338458495085	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAATGAAGTTTATT	409	False	NA	7	True	ATTAAA	-15	NA	52455971	52476349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52456180_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_39024.known	chr13	+	1972	6	FSM	ENSG00000136108.15	ENST00000378034.7	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_2	59.3518323221786	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTCTCTTGGTTTTGT	-36	True	NA	10	True	ATTAAA	-19	NA	52455438	52465843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294
transcript_39027.nic	chr13	+	568	4	ISM	ENSG00000136108.15	ENST00000378034.7	1972	6	-18	4585	-8	0	5prime_fragment	FALSE	canonical	3	573	junction_2	70.7687941272297	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCATTTCACCTTAAAAA	5246	False	NA	NA	False	NA	NA	NA	52455420	52461258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057
transcript_39028.known	chr13	+	537	4	FSM	ENSG00000136108.15	ENST00000480747.1	537	4	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_1	279.457013192051	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCATTTCACCTTAAAAA	14	True	NA	NA	False	NA	NA	NA	52456007	52461258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52456180_52456522_52456608_52460895_52460975_52461057
transcript_39029.known	chr13	+	579	3	FSM	ENSG00000136108.15	ENST00000468284.1	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	356.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATCGTGGCCAGATTG	5254	False	NA	NA	False	AAGAAA	-12	NA	52455428	52461353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52455627_52456522_52456608_52461057
transcript_39037.nic	chr13	+	946	6	NIC	ENSG00000244471.6	novel	865	4	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_5	10.1271911209377	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52570124	52587095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52584632_52584704_52586809
transcript_39040.nnic	chr13	+	875	5	NIC	ENSG00000244471.6	novel	865	4	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	9.67923034130297	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52570124	52587095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52586809
transcript_39046.known	chr13	+	2158	6	FSM	ENSG00000273784.5	ENST00000683187.1	2158	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	23.3957261054236	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	10	True	NA	-21	True	NA	NA	NA	52617524	52643773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
transcript_3905.known	chr1	-	545	4	FSM	ENSG00000043514.17	ENST00000541099.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	75.4895136205464	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATCCAGTTCAGGAG	66	False	NA	NA	False	NA	NA	NA	39883434	39841713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39883317
transcript_39054.known	chr13	+	1343	1	FSM	ENSG00000139675.13	ENST00000357495.5	1343	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54694	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	-1	True	NA	-21	True	NA	NA	NA	52642430	52643773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52642400_52643800
transcript_39055.known	chr13	-	975	1	FSM	ENSG00000273723.1	ENST00000620372.1	975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTCTTGGTCATAA	36	False	NA	79	True	AATAAA	-16	NA	52652279	52651304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52651300_52652300
transcript_3906.nnic	chr1	-	1171	3	NIC	ENSG00000043514.17	novel	2034	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	77.5	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-7	True	NA	-27	True	AATAAA	-17	NA	39883507	39841050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_39841914_39844100_39844219_39883317
transcript_39062.known	chr13	+	2802	1	FSM	ENSG00000165416.15	ENST00000609175.1	2802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGACTCCATCTCAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	52687143	52689945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52687100_52689900
transcript_39063.known	chr13	+	14161	13	FSM	ENSG00000165416.15	ENST00000310528.9	14161	13	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_5	63.7640507391639	3144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTGGGTTAAGTGG	-23	True	NA	NA	False	AATAAA	-16	NA	52652835	52700909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_39064.known	chr13	+	1217	14	FSM	ENSG00000165416.15	ENST00000343788.10	1217	14	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	164.078023004716	3459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	-20	True	NA	33	True	AATAAA	-33	NA	52652838	52687872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_39079.known	chr13	-	1444	7	FSM	ENSG00000136110.13	ENST00000448904.6	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	400.800206531328	3026	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-13	True	NA	-10	True	AATAAA	-27	NA	52739812	52703263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52703808_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_3908.known	chr1	+	2129	14	FSM	ENSG00000168389.18	ENST00000372811.10	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	6.73505358149155	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGTTTCTGTCTGTG	-6	True	NA	16	True	CATAAA	-13	NA	39955144	39969956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39955386_39957086_39957222_39958700_39958826_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_39088.nnic	chr13	+	1416	3	Fusion	ENSG00000273784.5_ENSG00000150276.8	novel	2158	6	NA	NA	25633	510	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAACAACAAAAAAA	229	False	NA	NA	False	AATAAA	-14	NA	52643157	52821528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr13_+_52643814_52820467_52821031_52821331
transcript_39091.nnic	chr13	+	1463	3	Fusion	ENSG00000273784.5_ENSG00000150276.8	novel	2158	6	NA	NA	25664	510	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAACAACAACAACAAAAAAA	260	False	NA	NA	False	AATAAA	-14	NA	52643188	52821528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr13_+_52643834_52820409_52821031_52821331
transcript_39092.known	chr13	-	744	2	FSM	ENSG00000136099.13	ENST00000613548.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGAAGTTGTTGGAAG	2945	False	NA	NA	False	TATAAA	-17	NA	52845693	52844458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52844934_52845424
transcript_3912.known	chr1	+	1914	12	FSM	ENSG00000168389.18	ENST00000420632.6	1914	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.0606518355241	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCTCAGCCACT	NA	False	NA	28	True	CATAAA	-25	NA	39955111	39969968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39955386_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_39130.nic	chr13	-	917	3	NIC	ENSG00000234787.8	novel	1060	5	NA	NA	-91	-5	combination_of_known_junctions	FALSE	canonical	3	298	junction_2	37	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGGCGTGGCCTCTGC	-4	True	NA	-8	True	CATAAA	-18	NA	54132957	54115787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_54116210_54127279_54127430_54132612
transcript_39132.known	chr13	-	849	3	FSM	ENSG00000234787.8	ENST00000607494.5	849	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	14.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTCTCTAAACCTTATTC	102	False	NA	NA	False	ACTAAA	-19	NA	54132851	54124812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54125273_54127279_54127430_54132612
transcript_39144.known	chr13	-	1060	5	FSM	ENSG00000234787.8	ENST00000423442.6	1060	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	141.871420659695	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	87	False	NA	-3	True	CATAAA	-23	NA	54132866	54115782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54116210_54120939_54121045_54125148_54125273_54127279_54127430_54132612
transcript_39145.known	chr13	-	1030	4	FSM	ENSG00000234787.8	ENST00000427299.6	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	643.008726396635	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	1	True	NA	-5	True	ATTAAA	-18	NA	54132862	54124323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54124756_54127279_54127430_54130873_54131072_54132612
transcript_39146.known	chr13	-	833	4	FSM	ENSG00000234787.8	ENST00000606706.5	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	619.910387789146	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGTTTGTTTATAC	134	False	NA	NA	False	NA	NA	NA	54132819	54124994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54125273_54127279_54127430_54130873_54131072_54132612
transcript_39147.known	chr13	-	1020	3	FSM	ENSG00000234787.8	ENST00000451744.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_1	5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTGTTTTAGAGTT	87	False	NA	NA	False	AATAAA	-26	NA	54132866	54126861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54127430_54130873_54131072_54132612
transcript_39152.nnic	chr13	+	1759	5	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.0178344238091	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	106	False	NA	10	True	AATAAA	-25	NA	54268593	54353580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335042_54335144_54341965_54342163_54342319_54342491_54353104
transcript_39170.nnic	chr13	+	1168	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGGGTGACTGTTAT	177	False	NA	NA	False	CATAAA	-20	NA	54268664	54342277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335030_54335144_54341965
transcript_39172.nnic	chr13	+	1473	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	6	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	36	False	NA	10	True	AATAAA	-25	NA	54268523	54353580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335030_54335144_54353104
transcript_39174.nnic	chr13	+	1902	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	6	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCCTGTTTCTTATTTT	NA	False	NA	NA	False	ATTAAA	-6	NA	54268470	54353956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335030_54335144_54353104
transcript_39176.nnic	chr13	+	1335	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_2	5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGGGTGACTGTTAT	-2	True	NA	NA	False	CATAAA	-20	NA	54268485	54342277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335042_54335144_54341965
transcript_39178.nnic	chr13	+	1499	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	3.5	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	-2	True	NA	10	True	AATAAA	-25	NA	54268485	54353580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335042_54335144_54353104
transcript_39180.nnic	chr13	+	1875	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	3.5	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCCTGTTTCTTATTTT	-2	True	NA	NA	False	ATTAAA	-6	NA	54268485	54353956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335042_54335144_54353104
transcript_39187.nnic	chr13	+	1360	2	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	36	False	NA	10	True	AATAAA	-25	NA	54268523	54353580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54353104
transcript_39189.nnic	chr13	+	1752	2	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTGTTTTTTGT	36	False	NA	NA	False	ATTAAA	-22	NA	54268523	54353972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54353104
transcript_39191.known	chr13	-	612	1	FSM	ENSG00000136149.6	ENST00000484130.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2601	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	14	False	NA	NA	False	AATACA	-36	NA	54441315	54440703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54440700_54441300
transcript_39215.nnic	chr13	+	836	4	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	9.80929264637478	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCCAGCGTCGTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	55039741	55161490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039846_55062871_55063003_55106769_55106837_55160956
transcript_39218.nnic	chr13	+	893	4	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23224	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	51.8137690837741	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCCAGCGTCGTGTAA	NA	False	NA	NA	False	AATAAA	-18	NA	55039720	55161490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55106769_55106837_55160956
transcript_39239.nnic	chr13	+	1282	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-87093	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	24.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTTAGCCA	NA	False	NA	NA	False	AATACA	-10	NA	55039741	55074397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039846_55062871_55063003_55073350
transcript_39248.nnic	chr13	+	622	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23195	-87781	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	21	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTTCTGTCTGACAGT	NA	False	NA	6	True	NA	NA	NA	55039749	55073709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_39249.nnic	chr13	+	1336	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23221	-87093	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_2	21	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTTAGCCA	NA	False	NA	NA	False	AATACA	-10	NA	55039723	55074397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_3925.known	chr1	+	2592	13	FSM	ENSG00000131236.18	ENST00000340450.7	2592	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	549.491349391012	3058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	1	True	NA	19	True	AATAAA	-10	NA	40040752	40072641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40040802_40059336_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_39250.nnic	chr13	+	639	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23284	-82383	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	62.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTCCTTTTCCTTTGA	NA	False	NA	2	True	AATAAA	-16	NA	55039660	55079107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55078820
transcript_39269.nnic	chr13	+	576	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23284	-98264	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	0	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGCACTTGCTTTATC	NA	False	NA	28	True	AATAAA	-39	NA	55039660	55063226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871
transcript_39270.nnic	chr13	+	1028	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23195	-97723	at_least_one_novel_splicesite	FALSE	canonical	3	133	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATAATGAGAAGGTG	NA	False	NA	NA	False	NA	NA	NA	55039749	55063767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871
transcript_39271.known	chr13	+	659	3	FSM	ENSG00000278630.1	ENST00000616578.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTCCAGCGTCGTGTAA	9066	False	NA	NA	False	AATAAA	-18	NA	55062944	55161490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_55063003_55106769_55106837_55160956
transcript_39308.nnic	chr13	+	878	3	Antisense	novelGene_ENSG00000274090.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	37	junction_1	4.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTCAGCTTCTTACTCT	NA	False	NA	14	True	AATAAA	-22	NA	55581425	55672522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_55581594_55670879_55670978_55671910
transcript_3931.known	chr1	-	2253	9	FSM	ENSG00000131238.18	ENST00000641691.1	2253	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	572.440376262017	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	-7	True	NA	-43	True	NA	NA	NA	40097254	40072737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092501_40097114
transcript_39314.nnic	chr13	-	914	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-243	19297	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	56	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGAGGAGTTATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	55583767	55516399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_55516934_55581427_55581530_55583489
transcript_3932.known	chr1	-	2340	9	FSM	ENSG00000131238.18	ENST00000530704.6	2340	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	582.173285521588	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGTTTCTTATCCTTG	-5	True	NA	-31	True	NA	NA	NA	40097252	40072725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089583_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_39321.nnic	chr13	-	1225	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-243	-18443	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	45	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTTTTTTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	55583767	55554139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_55554985_55581427_55581530_55583489
transcript_39329.nnic	chr13	-	742	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-243	-42567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	58.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	55583767	55578263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_55578626_55581427_55581530_55583489
transcript_39330.nnic	chr13	-	772	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-216	-42567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	33	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	55583740	55578263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_55578626_55581427_55581587_55583489
transcript_39334.nic	chr13	-	1112	2	ISM	ENSG00000274090.1	ENST00000617598.1	809	3	-232	18443	-232	-18443	5prime_fragment	FALSE	canonical	3	13	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTTTTTTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	55583756	55554139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_55554985_55583489
transcript_39336.nnic	chr13	-	2559	2	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-243	-43552	at_least_one_novel_splicesite	FALSE	canonical	3	117	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCATCCCTACTATCTT	NA	False	NA	NA	False	NA	NA	NA	55583767	55579248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_55581530_55583489
transcript_39338.known	chr13	-	809	3	FSM	ENSG00000274090.1	ENST00000617598.1	809	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATTATTTCAACTAATA	NA	False	NA	NA	False	NA	NA	NA	55583524	55535696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_55536347_55554860_55554985_55583489
transcript_39339.known	chr13	-	4745	28	FSM	ENSG00000139734.19	ENST00000400324.9	4745	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.0384263749541	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTTTGTCTCTCTT	-9	True	NA	NA	False	AATAAA	-29	NA	60163928	59665582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_39348.nic	chr13	-	896	6	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-195	242012	-33	-154817	5prime_fragment	FALSE	canonical	3	104	junction_5	16.8475517509222	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTATTGCTAATAATTA	-42	True	NA	NA	False	NA	NA	NA	60163961	60016070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_3935.known	chr1	-	2195	8	FSM	ENSG00000131238.18	ENST00000439754.6	2195	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	593.866851015187	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-5	True	NA	-34	True	NA	NA	NA	40097252	40072728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_39350.nic	chr13	-	872	4	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-195	319387	-33	-232192	5prime_fragment	FALSE	canonical	3	104	junction_3	13.3666251038423	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGCTGCTTCTGTTT	-42	True	NA	NA	False	ATTAAA	-20	NA	60163961	60093445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_60093733_60112009_60112187_60132956_60132990_60163586
transcript_39351.nic	chr13	-	655	4	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-195	319604	-33	-232409	5prime_fragment	FALSE	canonical	3	104	junction_3	13.3666251038423	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGCAGTACATTAAT	-42	True	NA	NA	False	GATAAA	-44	NA	60163961	60093662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_60093733_60112009_60112187_60132956_60132990_60163586
transcript_39355.known	chr13	+	3019	14	FSM	ENSG00000083544.16	ENST00000196169.7	3019	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	16.7536978166775	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTTTTATTTGCCT	NA	False	NA	22	True	AATAAA	-23	NA	60396456	60573878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_39356.known	chr13	+	2484	14	FSM	ENSG00000083544.16	ENST00000377894.6	2484	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	17.0186114620046	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGTTTTATTTGCC	1	True	NA	21	True	AATAAA	-22	NA	60396987	60573877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_39357.nic	chr13	+	2644	14	NIC	ENSG00000083544.16	novel	2645	14	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	5.7779421409889	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTTACTGTGTGTTTT	-4	True	NA	14	True	AATAAA	-15	NA	60397222	60573870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_39358.known	chr13	+	2645	14	FSM	ENSG00000083544.16	ENST00000377881.8	2645	14	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	7.8401183423021	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	-7	True	NA	15	True	AATAAA	-16	NA	60397219	60573871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_3936.known	chr1	-	1957	6	FSM	ENSG00000131238.18	ENST00000449045.7	1957	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	676.442281351484	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	NA	False	NA	-43	True	NA	NA	NA	40097260	40072737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40097114
transcript_39369.nic	chr13	+	1013	4	ISM	ENSG00000083544.16	ENST00000377881.8	2645	14	-15	112831	-15	0	5prime_fragment	FALSE	canonical	3	46	junction_1	6.0184900284226	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGTATATAGTTACTTC	1	True	NA	NA	False	AATAAA	-17	NA	60397204	60461040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379
transcript_39375.nnic	chr13	+	575	3	NNC	ENSG00000225249.6	novel	690	5	NA	NA	403567	-5	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	64.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCCTATACTGGAAATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	61088765	61176753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_61089014_61090818_61090921_61176528
transcript_39377.nnic	chr13	-	2919	2	Antisense	novelGene_ENSG00000225249.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGCATCCCATGAGTT	NA	False	NA	-16	True	AATAAA	-19	NA	61090910	60979337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_-_60982099_61090752
transcript_39379.known	chr13	-	4778	2	FSM	ENSG00000280165.1	ENST00000409204.4	4778	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGTAGTTATAGACA	138	False	NA	NA	False	ATTAAA	-41	NA	61415522	61409684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_61413967_61415026
transcript_3938.known	chr1	-	588	6	FSM	ENSG00000131238.18	ENST00000372779.9	588	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	692.976363233264	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTATCGCAACCACAGC	2	True	NA	NA	False	CATAAA	-6	NA	40097245	40080446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097110
transcript_39381.known	chr13	-	28227	2	FSM	ENSG00000184226.15	ENST00000377861.4	28227	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGAGACTTTGTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	67230445	67201014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_67228576_67229779
transcript_39384.known	chr13	-	2231	3	FSM	ENSG00000204899.6	ENST00000377818.4	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	32.5	967	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGTACTTTTGTTTT	-4	True	NA	-10	True	AATAAA	-16	NA	72727629	72708366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_72710346_72718951_72719098_72727523
transcript_39385.known	chr13	-	10571	21	FSM	ENSG00000083520.15	ENST00000377767.9	10571	21	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_20	24.2373162705775	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTCTAATTGCAAACT	3	True	NA	-4	True	AATAAA	-17	NA	72781900	72752168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
transcript_39388.known	chr13	+	2760	12	FSM	ENSG00000136122.18	ENST00000390667.11	2760	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	20.8473396443751	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	0	True	NA	22	True	AATAAA	-16	NA	72727922	72756196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_72728008_72728925_72729094_72731280_72731388_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_39391.known	chr13	+	1673	11	FSM	ENSG00000136122.18	ENST00000651376.1	1673	11	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_2	29.0757631026255	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTCTGTCAGAATCAA	0	True	NA	NA	False	AAAACA	-31	NA	72727922	72755216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_72728008_72728925_72729094_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_39399.known	chr13	+	3080	18	FSM	ENSG00000083535.16	ENST00000326291.11	3080	18	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_8	9.40624838341616	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGAAAGTCTGTTGC	2	True	NA	NA	False	AATAAA	-41	NA	72782132	73016461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590_72973676_72998821_72998996_73015868
transcript_39408.nic	chr13	+	1953	11	ISM	ENSG00000083535.16	ENST00000617689.4	2882	16	-83	80177	-76	203	5prime_fragment	TRUE	canonical	2	42	junction_8	10.1039596198718	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAGGAAATACGTAT	135	False	NA	NA	False	NA	NA	NA	72782056	72894074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783
transcript_39410.nic	chr13	+	2241	9	ISM	ENSG00000083535.16	ENST00000617689.4	2882	16	-19	138141	-12	834	5prime_fragment	FALSE	canonical	2	42	junction_8	9.51889568174796	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGAAATATCATTTT	-10	True	NA	NA	False	NA	NA	NA	72782120	72836110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242
transcript_39412.nic	chr13	+	1164	2	ISM	ENSG00000083535.16	ENST00000617689.4	2882	16	-83	189958	-76	-13733	5prime_fragment	FALSE	canonical	3	68	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAGCCAGCCATGATGG	135	False	NA	NA	False	NA	NA	NA	72782056	72784293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_72782350_72783422
transcript_39417.nnic	chr13	-	1439	5	NNC	ENSG00000118922.18	novel	1119	4	NA	NA	-365	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	16.1941347407016	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTATTTTTGAATGTCAC	-8	True	NA	NA	False	NA	NA	NA	74134294	73812872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_73813288_73845826_73846374_73943980_73944071_73994989_73995054_74133971
transcript_39420.known	chr13	-	10832	8	FSM	ENSG00000118922.18	ENST00000377669.7	10832	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	17.9432211064087	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCTAACTGACTCAGACA	-13	True	NA	-15	True	AATAAA	-21	NA	74133929	73686088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_73695672_73715367_73715526_73764937_73765001_73813151_73813288_73845826_73846374_73943980_73944071_73994989_73995054_74133738
transcript_39424.known	chr13	-	580	4	FSM	ENSG00000188243.14	ENST00000377612.8	580	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1012.10550613835	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	NA	False	NA	-21	True	AATAAA	-18	NA	75538802	75526435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530113_75530260_75537740_75537921_75538752
transcript_39426.known	chr13	-	463	3	FSM	ENSG00000188243.14	ENST00000460675.5	463	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1073.5	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	6	True	NA	-21	True	AATAAA	-18	NA	75549428	75526435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530113_75530267_75549322
transcript_39427.known	chr13	-	486	5	FSM	ENSG00000188243.14	ENST00000355801.4	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	998.670240870328	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-9	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75527812_75527852_75530113_75530267_75537663_75537676_75537763
transcript_39428.known	chr13	-	392	4	FSM	ENSG00000188243.14	ENST00000497707.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	949.051105051778	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-9	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530310_75530409_75537663_75537676_75537763
transcript_39429.known	chr13	-	1669	4	FSM	ENSG00000188243.14	ENST00000682242.1	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	1994	junction_2	63.5207752541551	7727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTTGAATTTAAAAAGC	-9	True	NA	NA	False	AATAAA	-17	NA	75537841	75525213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530113_75530267_75537663_75537676_75537763
transcript_39430.known	chr13	-	374	4	FSM	ENSG00000188243.14	ENST00000486516.5	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	948.809195196215	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	6	True	NA	-21	True	AATAAA	-18	NA	75537826	75526435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530310_75530406_75537663_75537676_75537763
transcript_39431.nnic	chr13	+	1070	8	NIC	ENSG00000118939.18	novel	931	9	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_7	409.807072577687	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	5	True	NA	30	True	ATTAAA	-17	NA	75549505	75605933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75605728
transcript_39437.known	chr13	+	3472	24	FSM	ENSG00000136153.20	ENST00000377499.9	3472	24	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_17	33.9632849691828	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAATGGTAAATGCG	-13	True	NA	NA	False	AATAAA	-36	NA	75636322	75845368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_75636727_75713181_75713253_75727028_75727099_75760931_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326
transcript_39439.known	chr13	+	2039	1	FSM	ENSG00000136153.20	ENST00000605961.1	2039	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGTGGGTCGTCTTTTT	7125	False	NA	16	True	AATAAA	-16	NA	75856636	75858675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_75856600_75858700
transcript_3944.known	chr1	+	6232	8	FSM	ENSG00000117000.9	ENST00000372771.5	6232	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	18.5736262435943	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTGTTTACTCATAATG	4	True	NA	7	True	AATAAA	-18	NA	40161386	40240921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631_40195765_40202411_40202615_40222573_40222711_40231516_40231659_40235791
transcript_39440.known	chr13	+	5580	27	FSM	ENSG00000136153.20	ENST00000465261.6	5580	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.5294813940111	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGAGTGGGTCGTCTTTTT	21	False	NA	16	True	AATAAA	-16	NA	75760660	75858675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_75761039_75795400_75795432_75796635_75796750_75800683_75800883_75804288_75804542_75805478_75805761_75807479_75808200_75809153_75809184_75817160_75817279_75819392_75819536_75821176_75821610_75823564_75823874_75833050_75833166_75834225_75834388_75835232_75835340_75836396_75836458_75838139_75838197_75840084_75840111_75840390_75840496_75841108_75841202_75841627_75841984_75842850_75842917_75845326_75845380_75849078_75849293_75853091_75853389_75856505_75856609_75857920
transcript_39443.nic	chr13	+	978	9	NIC	ENSG00000118939.18	novel	1050	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	362.853599093353	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	NA	False	NA	30	True	ATTAAA	-17	NA	75549464	75605933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_39455.known	chr13	-	549	3	FSM	ENSG00000261105.6	ENST00000568302.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTCCCCCAGTGAGG	199	False	NA	NA	False	NA	NA	NA	75635994	75604699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75604946_75618769_75618907_75635828
transcript_39456.known	chr13	+	696	7	FSM	ENSG00000118939.18	ENST00000471792.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	416.47568956663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACTATTTTAATTTG	-18	True	NA	NA	False	NA	NA	NA	75549482	75594990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914
transcript_39458.known	chr13	+	1863	5	FSM	ENSG00000283208.2	ENST00000638147.2	1863	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	50.5933543066676	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAAATGACCTGGCGAT	-9	True	NA	NA	False	AATAAA	-25	NA	76992077	77078025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77075517_77075585_77076815
transcript_39459.known	chr13	+	2683	5	FSM	ENSG00000102805.16	ENST00000636780.2	2683	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	48.6383336474431	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTGTTGGGTCTAAT	6306	False	NA	-27	True	TATAAA	-19	NA	76992043	77002477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_76998042_76998086_77000457
transcript_39460.known	chr13	-	3506	5	FSM	ENSG00000005812.11	ENST00000355619.10	3506	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	15.6424902109607	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTATTTTACTTTTTAAA	1	True	NA	-10	True	AATAAA	-15	NA	77027159	77005259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77007789_77015408_77015581_77018599_77018723_77021512_77021862_77026826
transcript_39464.known	chr13	+	604	4	FSM	ENSG00000102805.16	ENST00000635989.1	604	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	51.389579574938	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGTTCAAGTAGCAAC	2	True	NA	NA	False	NA	NA	NA	76992088	76996099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995456_76995514_76995901
transcript_39465.known	chr13	+	5243	4	FSM	ENSG00000102805.16	ENST00000377453.9	5243	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	18.0616229121921	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAACCTTGTATCTTCA	-6	True	NA	NA	False	AATAGA	-8	NA	76992080	77005117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77000457
transcript_39470.known	chr13	+	2341	3	FSM	ENSG00000102805.16	ENST00000485938.4	2341	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	13	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAGGATATGTTAAC	-28	True	NA	NA	False	ATTAAA	-45	NA	76992058	76997863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995901
transcript_39473.known	chr13	-	649	2	FSM	ENSG00000005810.19	ENST00000491491.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTAAAGCTGCTGGTAA	33	True	NA	NA	False	AAGAAA	-45	NA	77327050	77296602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77296675_77326473
transcript_39475.known	chr13	-	2555	8	FSM	ENSG00000136160.17	ENST00000475537.2	2555	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	140.01603406724	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATCTACAATTTTTT	227	False	NA	NA	False	NA	NA	NA	77919390	77897349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919065
transcript_39477.known	chr13	-	4445	8	FSM	ENSG00000136160.17	ENST00000646605.1	4445	8	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_7	140.277712893723	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGAAGTTATTCAATTA	220	False	NA	-45	True	AATATA	-14	NA	77919397	77895525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919006
transcript_39479.known	chr13	-	4300	7	FSM	ENSG00000136160.17	ENST00000646607.2	4300	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	100.500414592843	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGGACTGTGTGTT	-2	True	NA	-6	True	ATTAAA	-18	NA	77918831	77895486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_39488.known	chr13	-	4471	8	FSM	ENSG00000136160.17	ENST00000377211.8	4471	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	125.107300884856	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTGTGTGTTTCATTG	NA	False	NA	0	True	ATTAAA	-24	NA	77919768	77895480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919396
transcript_39489.known	chr13	-	681	5	FSM	ENSG00000136160.17	ENST00000645696.1	681	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	153.483508886134	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTCACTGTATTTCATTT	4452	False	NA	-16	True	AATAAA	-24	NA	77903568	77898191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77901057_77901208_77903155_77903361_77903494
transcript_39492.known	chr13	-	3507	6	FSM	ENSG00000152193.8	ENST00000282003.7	3507	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	28.2460616723819	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGATGTCGATGATGA	-6	True	NA	-8	True	AATAAA	-20	NA	78659155	78614288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_78617123_78635109_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
transcript_39500.known	chr13	-	3624	21	FSM	ENSG00000139746.16	ENST00000267229.11	3624	21	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	33.9527244856727	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCAAGACAATGTTCC	9	True	NA	-113	True	AAAAAG	-42	NA	79405788	79319953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_79320711_79322348_79322463_79334343_79334431_79337101_79337303_79341122_79341228_79342663_79342832_79344247_79344323_79344668_79344795_79354438_79354562_79355219_79355385_79358273_79358434_79359574_79359687_79365577_79365719_79366054_79366196_79366632_79366873_79368729_79368991_79370944_79371163_79371841_79371931_79377378_79377516_79378788_79378908_79405703
transcript_39504.known	chr13	+	4770	7	FSM	ENSG00000227354.7	ENST00000656024.1	4770	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	12.0057856423013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTAATAAAGATCTGTGA	1	True	NA	-24	True	NA	NA	NA	79406300	79427317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79406478_79412681_79412908_79415110_79415365_79417834_79417917_79420759_79420816_79421986_79422196_79423551
transcript_39507.known	chr13	+	1756	6	FSM	ENSG00000227354.7	ENST00000456602.5	1756	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	11.5516232625549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGAAAATTGTGTTG	9	True	NA	7	True	AATAAA	-23	NA	79406308	79422955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79406478_79412681_79412908_79415110_79415365_79417834_79417917_79420759_79420816_79421986
transcript_39513.known	chr13	+	2721	5	FSM	ENSG00000227354.7	ENST00000664699.1	2721	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	11.7792189893897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGTGTCTGAAGGAT	6	True	NA	NA	False	AATGAA	-32	NA	79406305	79425753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79406478_79417834_79417917_79420759_79420816_79421986_79422196_79423551
transcript_39514.known	chr13	+	1502	5	FSM	ENSG00000227354.7	ENST00000656910.1	1502	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	11.7473401244707	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGGAAATGATTTTGAAAA	1	True	NA	-1	True	AATAAA	-15	NA	79406300	79422947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79406478_79412681_79412908_79417834_79417917_79420759_79420816_79421986
transcript_3952.nic	chr1	+	2109	4	ISM	ENSG00000117000.9	ENST00000372771.5	6232	8	-14	43682	-14	-43682	5prime_fragment	FALSE	canonical	3	95	junction_2	6.23609564462324	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGGAAAAGTGCTGTTA	-10	True	NA	NA	False	AAAAAG	-1	NA	40161372	40197239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631
transcript_39520.known	chr13	+	2359	4	FSM	ENSG00000227354.7	ENST00000654024.1	2359	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	10.1980390271856	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTACATAGTGAATACAA	-7	True	NA	NA	False	NA	NA	NA	79406292	79424022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79406478_79417834_79417917_79420759_79420816_79421986
transcript_39529.nnic	chr13	+	1033	3	NNC	ENSG00000227354.7	novel	2427	7	NA	NA	-3	8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	14.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GGAAAAAAAAAAAAAAGCTA	-10	True	NA	NA	False	AAGAAA	-3	NA	79406289	79424336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_79406478_79412681_79412848_79423657
transcript_39533.known	chr13	-	2192	3	FSM	ENSG00000139746.16	ENST00000472143.2	2192	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAAACAAACT	NA	False	NA	NA	False	NA	NA	NA	79406477	79376216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_79377516_79378788_79378908_79405703
transcript_3954.nic	chr1	+	1201	3	ISM	ENSG00000117000.9	ENST00000372771.5	6232	8	-14	49368	-14	-49368	5prime_fragment	FALSE	canonical	3	95	junction_2	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACATAATAAATAATAGACC	-10	True	NA	NA	False	NA	NA	NA	40161372	40191553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_40161637_40189054_40189210_40190771
transcript_39543.known	chr13	+	2324	8	FSM	ENSG00000102471.15	ENST00000620924.1	2324	8	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_7	22.0305909765378	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTTTGTCTCATT	0	True	NA	81	True	AATAAA	-27	NA	79481473	79554096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
transcript_39548.known	chr13	+	1384	8	FSM	ENSG00000102471.15	ENST00000487865.5	1384	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	110.226297836287	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACATATATATACACACAC	-3	True	NA	NA	False	AATATA	-16	NA	79481452	79553195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543617_79543683_79548327_79548395_79551016_79551123_79552515
transcript_3955.nic	chr1	+	1026	2	ISM	ENSG00000117000.9	ENST00000372771.5	6232	8	-14	51105	-14	-51105	5prime_fragment	FALSE	canonical	3	100	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGTGATTTAGCTGTTAT	-10	True	NA	NA	False	NA	NA	NA	40161372	40189816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_40161637_40189054
transcript_39550.known	chr13	+	698	7	FSM	ENSG00000102471.15	ENST00000465762.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	115.131808521074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACTTTAATAGAAGACTA	1	True	NA	-7	True	NA	NA	NA	79481456	79552578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79548327_79548395_79551016_79551123_79552515
transcript_39552.known	chr13	-	2286	2	FSM	ENSG00000136158.12	ENST00000377104.4	2286	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	2	True	NA	-22	True	ATTAAA	-1	NA	80341126	80335975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_80337757_80340621
transcript_39553.nnic	chr13	-	760	4	Antisense	novelGene_ENSG00000214182.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.55902608401044	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCTCCAGTTACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	81868656	81689653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_-_81690115_81690324_81690397_81741859_81741990_81868559
transcript_39555.known	chr13	+	1162	1	FSM	ENSG00000214182.5	ENST00000607242.1	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3841	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTTCTAAAAAAAAAAAAAA	16	False	NA	-14	True	AATAAA	-23	NA	81689910	81691072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_81689900_81691100
transcript_39556.known	chr13	+	333	1	FSM	ENSG00000214182.5	ENST00000393073.4	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	390	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGCAAAAAAGGAAAAGTT	173	False	NA	NA	False	NA	NA	NA	81690067	81690400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_81690100_81690400
transcript_39558.nnic	chr13	+	743	5	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.73205080756888	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAGTGAAGAAAAATAAAA	NA	False	NA	2	True	AATAAA	-29	NA	87189248	87357263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr13_+_87189559_87189656_87189776_87223148_87223221_87356105_87356269_87357184
transcript_3956.known	chr1	-	1541	1	FSM	ENSG00000259943.1	ENST00000567508.1	1541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	328	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTAGTGTATGTTTTA	-25	True	NA	-4	True	AATAAA	-17	NA	40257967	40256426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40256400_40258000
transcript_39566.nnic	chr13	-	626	4	NNC	ENSG00000229557.1	novel	431	2	NA	NA	-69205	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.05480466765633	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGAGAAATGATTTCAA	NA	False	NA	-8	True	AATAAA	-16	NA	91200612	91127612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_91127859_91131222_91131408_91194013_91194081_91200484
transcript_39567.nnic	chr13	-	545	3	NNC	ENSG00000229557.1	novel	431	2	NA	NA	-69191	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTGAGAAATGATTTCAA	NA	False	NA	-8	True	AATAAA	-16	NA	91200598	91127612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_91127859_91131222_91131408_91200484
transcript_39569.known	chr13	-	380	4	FSM	ENSG00000235984.5	ENST00000451897.5	380	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTTTAGGTGTGTAGG	5	True	NA	NA	False	AATAAA	-16	NA	92719975	92701388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_92701517_92705960_92706060_92709488_92709574_92719907
transcript_39570.known	chr13	-	393	4	FSM	ENSG00000235984.5	ENST00000419288.1	393	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAGTTTAGGTGTGTAGG	NA	False	NA	NA	False	AATAAA	-16	NA	92721614	92701388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_92701517_92705960_92706060_92709488_92709574_92721533
transcript_39571.known	chr13	+	792	5	FSM	ENSG00000183098.11	ENST00000617456.1	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	9.52299847737046	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTTTTTGGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	94286347	94403217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_94286480_94305979_94306124_94382413_94382551_94398465_94398642_94403014
transcript_39574.known	chr13	-	706	1	FSM	ENSG00000278177.1	ENST00000610286.1	706	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATTTTAAGTCATTAAC	NA	False	NA	-3	True	AATAAA	-17	NA	93227317	93226611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_93226600_93227300
transcript_39576.nnic	chr13	-	1975	13	NNC	ENSG00000088451.11	novel	1797	12	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_7	43.6192490637894	309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	13	True	NA	NA	False	AATAAA	-17	NA	94596257	94574053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94581560_94581634_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_39584.nic	chr13	-	1994	12	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_11	33.6041614896353	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-3	True	NA	NA	False	AATAAA	-17	NA	94596273	94574053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94595974
transcript_39585.known	chr13	-	1797	12	FSM	ENSG00000088451.11	ENST00000261296.7	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	16.5848681405572	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	14	True	NA	NA	False	AATAAA	-17	NA	94596152	94574053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_39590.nnic	chr13	-	1883	11	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-87	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_8	35.0964385657576	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	94596329	94574053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94592240_94592310_94593840_94593908_94596050
transcript_39600.known	chr13	+	8884	9	FSM	ENSG00000152749.8	ENST00000376958.5	8884	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	23.3288314109387	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTGTCTGCAAATAAT	-18	True	NA	26	True	AATAAA	-38	NA	94601856	94634661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_94602073_94605390_94605550_94612189_94612391_94619149_94619331_94619467_94619518_94621077_94621236_94623108_94623301_94625965_94626044_94627012
transcript_39617.nnic	chr13	-	522	3	NNC	ENSG00000238230.2	novel	1389	3	NA	NA	-20	-6038	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCCTCTTTCAGGTTTC	9	True	NA	NA	False	AAGAAA	-41	NA	94708495	94705731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_94705958_94706136_94706288_94708350
transcript_39622.nnic	chr13	+	377	2	Antisense	novelGene_ENSG00000223298.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	113	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCAAGTCTGCTGC	91	False	NA	21	True	AATAAA	-16	NA	95301062	95311010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_95301264_95310834
transcript_39624.nnic	chr13	+	662	2	Antisense	novelGene_ENSG00000223298.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	55	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCTCAAGTCTGCTGC	608	False	NA	21	True	AATAAA	-16	NA	95301579	95311010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_95302066_95310834
transcript_39632.nnic	chr13	+	1091	6	NNC	ENSG00000134873.10	novel	2466	5	NA	NA	-56	-1521	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	300.767418448209	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAAATGTTTTCTACA	241	False	NA	21	True	AATAAA	-17	NA	95552663	95578238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_95552974_95557534_95557625_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_39638.known	chr13	+	2466	5	FSM	ENSG00000134873.10	ENST00000299339.3	2466	5	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_3	42.2315048275574	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTGAAATATCTTTT	-8	True	NA	4	True	AATAAA	-19	NA	95552719	95579759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_95552974_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_3964.known	chr1	+	2975	10	FSM	ENSG00000084073.10	ENST00000372759.4	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_9	53.8855669079175	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTTGTCTTTAGTTTG	-1	True	NA	20	True	ATTAAA	-20	NA	40258235	40294180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_39650.nic	chr13	+	1036	3	ISM	ENSG00000134873.10	ENST00000299339.3	2466	5	-63	18821	-63	0	5prime_fragment	FALSE	canonical	3	599	junction_1	44.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATACGATGCAAGGTTT	234	False	NA	NA	False	AATAAA	-15	NA	95552656	95560938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_95552974_95560131_95560294_95560381
transcript_39656.known	chr13	-	1580	6	FSM	ENSG00000134874.18	ENST00000466027.1	1580	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.4996774159981	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAGGGTGGCCTAAAGT	40	False	NA	NA	False	AGTAAA	-15	NA	95644666	95637008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95637177_95641294_95641856_95641993_95642242_95643042_95643258_95643600_95643699_95644376
transcript_39657.known	chr13	-	2909	2	FSM	ENSG00000247400.5	ENST00000671463.2	2927	2	18	0	-10	0	multi-exon	FALSE	canonical	3	11	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATCTAGTAAAATATCTA	215	False	NA	NA	False	TTTAAA	-44	NA	95676955	95672863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95674669_95675851
transcript_39658.nnic	chr13	-	1104	2	FSM	ENSG00000247400.5	ENST00000692031.1	2866	2	32	1730	-2	749	multi-exon	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGGTTTTTGAACTT	-16	True	NA	NA	False	TATAAA	-14	NA	95676941	95674361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95674669_95676144
transcript_39659.known	chr13	-	401	2	FSM	ENSG00000247400.5	ENST00000606011.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCCATTTTTATAAAT	376	False	NA	NA	False	NA	NA	NA	95676794	95648732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95648835_95676495
transcript_39662.known	chr13	+	5590	12	FSM	ENSG00000102580.15	ENST00000602402.6	5590	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.08208315770099	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGCTTTTGATTCAT	-6	True	NA	22	True	AATAAA	-23	NA	95677138	95794988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006_95787156_95790872
transcript_39668.known	chr13	-	1547	10	FSM	ENSG00000102595.21	ENST00000397618.7	1547	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	36.8443506231214	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTTTTAATTGTAAT	-4	True	NA	-17	True	AATAAA	-16	NA	96053400	95984909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_39672.known	chr13	-	2240	8	FSM	ENSG00000102595.21	ENST00000376712.4	2240	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	64.0707517084808	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTTTGTATA	3	True	NA	NA	False	NA	NA	NA	96053393	95990144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95991474_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_39673.nic	chr13	-	767	2	ISM	ENSG00000102595.21	ENST00000621375.5	1004	8	45	35577	-36	-35577	5prime_fragment	FALSE	canonical	3	192	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAAATAAATTG	373	False	NA	NA	False	AAAAAG	-6	NA	96053437	96031487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_96031972_96053154
transcript_39674.known	chr13	-	4850	39	FSM	ENSG00000102595.21	ENST00000376747.8	4850	39	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_20	44.4943271929644	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	-5	True	NA	-4	True	AATAAA	-21	NA	96053401	95801579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_39675.known	chr13	-	805	5	FSM	ENSG00000102595.21	ENST00000461329.5	805	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	41.0791918128875	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATTGTAATTTCTCA	NA	False	NA	-11	True	AATAAA	-22	NA	95999307	95984903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210
transcript_39676.known	chr13	-	2503	4	FSM	ENSG00000165621.9	ENST00000541038.2	2503	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTTGGTCATATTT	NA	False	NA	NA	False	AATAAA	-20	NA	96994476	96985712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_96987834_96989757_96989810_96992421_96992573_96994297
transcript_39677.known	chr13	-	2285	4	FSM	ENSG00000165621.9	ENST00000298440.5	2285	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.09120616516523	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAATAGGCTGTTTGGTC	NA	False	NA	NA	False	AATAAA	-14	NA	96994350	96985718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_96987834_96989757_96989810_96992507_96992573_96994297
transcript_39680.known	chr13	+	5540	2	FSM	ENSG00000125249.7	ENST00000245304.5	5540	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGGTTTTTTTGTT	2	True	NA	NA	False	AATAAA	-15	NA	97434168	97469128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_97434785_97464204
transcript_39681.known	chr13	+	3419	26	FSM	ENSG00000065150.21	ENST00000490680.5	3419	26	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_11	190.114508652023	457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTTGTTTTGTTTTT	12	False	NA	33	True	AATAAA	-19	NA	97976631	98021882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538_98000646_98002466_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
transcript_39683.known	chr13	+	10419	27	FSM	ENSG00000152767.17	ENST00000319562.11	10419	27	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	48.3132193065554	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTTGAAACTAATTT	-2	True	NA	NA	False	NA	NA	NA	98143093	98455176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_98143493_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
transcript_39684.known	chr13	+	4926	28	FSM	ENSG00000152767.17	ENST00000595437.5	4926	28	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	161.988932542066	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTCTGTAGTCTTCATT	-3	True	NA	52	True	AAAACA	-6	NA	98142561	98449773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_98142778_98213219_98213414_98343761_98343867_98365394_98365438_98368116_98368196_98377820_98377919_98384729_98384845_98385666_98385815_98388382_98388479_98389956_98390121_98390811_98390881_98393642_98393719_98395226_98395477_98409337_98409526_98410733_98410824_98411900_98412035_98424571_98424651_98431042_98431281_98435575_98435707_98437765_98437859_98438803_98438873_98439106_98439197_98439960_98440044_98440122_98440236_98440669_98440837_98446097_98446206_98446665_98446818_98448235
transcript_39687.nnic	chr13	-	560	2	Fusion	ENSG00000102572.15_ENSG00000231194.1	novel	323	2	NA	NA	6490	-2	intron_retention	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTATTTATTTGC	NA	False	NA	NA	False	AATAAA	-12	NA	98457295	98435406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr13_-_98435839_98457167
transcript_39689.known	chr13	-	1590	10	FSM	ENSG00000102572.15	ENST00000444574.1	1590	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	229.892782309547	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTTGCCTGAACACAA	2878	False	NA	NA	False	AATAAA	-25	NA	98519267	98455981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_98456561_98457167_98457305_98460371_98460441_98461773_98461898_98463690_98463837_98466375_98466562_98474820_98474979_98475249_98475359_98482264_98482322_98519242
transcript_39690.known	chr13	-	3124	23	FSM	ENSG00000088386.17	ENST00000376503.10	3124	23	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_4	3.00996966020787	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAGTGTTCATGTATCT	-18	True	NA	-4	True	AATAAA	-14	NA	98752672	98683800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_98684916_98686189_98686298_98687580_98687725_98688247_98688357_98688469_98688578_98702479_98702530_98704288_98704436_98706133_98706254_98708685_98708768_98709571_98709661_98709741_98709775_98709866_98709912_98711853_98711944_98712497_98712585_98715877_98715961_98719236_98719321_98721494_98721586_98721803_98721904_98723911_98724032_98726122_98726265_98726367_98726450_98726842_98726860_98752594
transcript_39693.known	chr13	-	1354	4	FSM	ENSG00000228889.8	ENST00000671580.1	1354	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.11805216802087	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAAGACTCCATCTCAA	-11	True	NA	NA	False	NA	NA	NA	99200693	99181222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99181876_99182584_99182703_99197547_99197803_99200365
transcript_39694.known	chr13	-	753	4	FSM	ENSG00000228889.8	ENST00000668596.1	753	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGCCTGAGACCAGAG	NA	False	NA	NA	False	AATAAA	-23	NA	99200705	99181563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99181876_99182584_99182703_99197547_99197803_99200637
transcript_39695.known	chr13	-	1771	2	FSM	ENSG00000228889.8	ENST00000658188.1	1765	2	-9	3	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTTAGCATCAGGAA	NA	False	NA	-15	True	AATAAA	-16	NA	99200710	99196376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99197803_99200365
transcript_39697.known	chr13	-	1749	2	FSM	ENSG00000228889.8	ENST00000668873.1	1749	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATCCTGCTCATTCT	NA	False	NA	-80	True	CATAAA	-25	NA	99200717	99196441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99197803_99200329
transcript_39698.known	chr13	-	1499	2	FSM	ENSG00000228889.8	ENST00000445737.2	1499	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTTAGCATCAGGAA	NA	False	NA	-15	True	AATAAA	-16	NA	99200710	99196376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99197803_99200637
transcript_39706.known	chr13	+	2259	9	FSM	ENSG00000134882.16	ENST00000403766.8	2259	9	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_8	30.7164451068153	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCACTGCTCGTCTT	-2	True	NA	10	True	AATAAA	-40	NA	99200853	99386504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_39707.known	chr13	+	1855	6	FSM	ENSG00000134882.16	ENST00000494576.5	1855	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_5	37.1375820429925	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTTCTATCAGACTT	NA	False	NA	30	True	AATAAA	-24	NA	99244514	99386434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_39708.known	chr13	-	1685	2	FSM	ENSG00000169508.7	ENST00000376414.5	1685	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGAGTCTGTCCCTCAA	-3	True	NA	-15	True	AATAAA	-18	NA	99307399	99294538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99296164_99307339
transcript_39715.known	chr13	+	3417	17	FSM	ENSG00000125304.10	ENST00000376387.5	3417	17	0	0	0	0	multi-exon	TRUE	canonical	3	1358	junction_5	198.62165667419	1052	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTTTTGAGA	-1	True	NA	NA	False	NA	NA	NA	99501471	99564048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_39718.known	chr13	-	872	2	FSM	ENSG00000203441.2	ENST00000366259.2	872	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTGAACCCGGGAGGC	467	False	NA	NA	False	NA	NA	NA	99501052	99499726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99499941_99500394
transcript_39722.known	chr13	+	1169	9	FSM	ENSG00000125246.16	ENST00000339105.9	1181	9	6	6	6	-6	multi-exon	FALSE	canonical	3	66	junction_7	16.3013611394877	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	19	True	NA	4	True	ATTAAA	-16	NA	99606695	99892564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_39723.nnic	chr13	+	1202	9	NNC	ENSG00000125246.16	novel	386	4	NA	NA	111799	-6	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	29.3382749152025	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	NA	False	NA	4	True	ATTAAA	-16	NA	99718488	99892564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_99718584_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_39727.known	chr13	+	6771	8	FSM	ENSG00000125246.16	ENST00000376355.7	6771	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	14.8982946565528	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTTGAAACCAGCCAC	-8	True	NA	NA	False	ATTAAA	-24	NA	99606668	99897134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317
transcript_39731.nic	chr13	+	1115	8	ISM	ENSG00000125246.16	ENST00000693071.1	3252	9	-25	16864	-21	-6	5prime_fragment	FALSE	canonical	3	5	junction_3	32.9675164799707	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	NA	False	NA	4	True	ATTAAA	-16	NA	99606647	99892564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_39734.known	chr13	+	1127	7	FSM	ENSG00000125246.16	ENST00000376354.5	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	35.4749520397452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTTATGATTTTATC	13	True	NA	2	True	AATGAA	-17	NA	99606689	99891613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99864817_99864912_99866239_99866408_99870937_99871063_99891317
transcript_39735.nic	chr13	+	1009	5	ISM	ENSG00000125246.16	ENST00000339105.9	1181	9	-42	27332	-21	0	5prime_fragment	FALSE	canonical	3	88	junction_1	8.09320702811932	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	NA	False	NA	8	True	AATAAA	-22	NA	99606647	99865238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817
transcript_3974.known	chr1	-	2852	32	FSM	ENSG00000049089.15	ENST00000372748.8	2852	32	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_30	49.0354625438433	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-2	True	NA	-6	True	NA	NA	NA	40317286	40300488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
transcript_39742.nnic	chr13	+	941	2	NNC	ENSG00000125246.16	novel	1127	7	NA	NA	-10	-206504	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCCCAAAACCAAACAACA	-18	True	NA	NA	False	ATTAAA	-16	NA	99606658	99658734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_99606758_99657892
transcript_39743.nnic	chr13	+	1221	2	NNC	ENSG00000125246.16	novel	1127	7	NA	NA	-10	-206224	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAGTTGCTTAGTATTT	-18	True	NA	7	True	ATTAAA	-25	NA	99606658	99659014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_99606758_99657892
transcript_39745.known	chr13	+	712	3	FSM	ENSG00000125246.16	ENST00000416504.5	712	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	NA	False	NA	8	True	AATAAA	-22	NA	99858860	99865238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99859050_99862990_99863093_99864817
transcript_39748.known	chr13	-	695	2	FSM	ENSG00000227659.1	ENST00000430125.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTACTTAACAAAACAATGT	NA	False	NA	NA	False	GATAAA	-3	NA	99690971	99690080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99690357_99690552
transcript_39750.known	chr13	+	2963	3	FSM	ENSG00000043355.12	ENST00000376335.8	2963	3	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_2	3	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATACTATTTTTTCTA	-1	True	NA	23	True	AATAAA	-17	NA	99981783	99986765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99983140_99984945_99985110_99985322
transcript_39751.known	chr13	+	455	3	FSM	ENSG00000043355.12	ENST00000490085.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	209.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTCCGCGGTGCACCGGG	1231	False	NA	NA	False	NA	NA	NA	99984288	99985492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99984410_99984945_99985110_99985322
transcript_39752.known	chr13	+	218	2	FSM	ENSG00000043355.12	ENST00000481565.1	218	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGAAAATATAAAACAAATA	2436	False	NA	-31	True	NA	NA	NA	99985493	99985904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99985673_99985865
transcript_39755.known	chr13	-	913	2	FSM	ENSG00000274605.3	ENST00000612598.2	1038	2	119	6	102	-6	multi-exon	FALSE	canonical	3	261	junction_1	0	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGATTTGAGGATTGC	95	False	NA	-12	True	AATAAA	-19	NA	100088848	100086030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100086728_100088632
transcript_39763.known	chr13	+	2484	24	FSM	ENSG00000175198.17	ENST00000376285.6	2484	24	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_22	29.9563008763234	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTCTTT	6	True	NA	32	True	AATAAA	-19	NA	100089092	100530435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_39765.known	chr13	+	2418	23	FSM	ENSG00000175198.17	ENST00000376279.7	2418	23	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_21	64.7628381605653	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	29	True	AATAAA	-16	NA	100089014	100530432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100527674_100527753_100530097
transcript_39772.known	chr13	+	2481	23	FSM	ENSG00000175198.17	ENST00000376286.8	2481	23	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	75.2363218946235	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	29	True	AATAAA	-16	NA	100089014	100530432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_100089226_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_39797.known	chr13	+	602	4	FSM	ENSG00000175198.17	ENST00000428969.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	160.985161497022	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	29	True	AATAAA	-16	NA	100515426	100530432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_100515568_100527296_100527345_100527674_100527753_100530097
transcript_39800.known	chr13	-	2644	3	FSM	ENSG00000134864.11	ENST00000683975.1	2644	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	10.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAATCCTTCATTCC	-25	True	NA	NA	False	ATTAAA	-18	NA	100588789	100530179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100532602_100583824_100583998_100588740
transcript_39802.known	chr13	-	348	1	FSM	ENSG00000234354.3	ENST00000427219.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	943	False	NA	NA	False	NA	NA	NA	100540248	100539900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100539900_100540200
transcript_39803.known	chr13	-	3911	19	FSM	ENSG00000125247.16	ENST00000342624.10	3911	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	22.1289710114296	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTTTTTTTTG	12	True	NA	-2	True	AATAAA	-16	NA	100674795	100603624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_39804.known	chr13	-	3483	18	FSM	ENSG00000125247.16	ENST00000376234.7	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	38.1190994639779	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	NA	False	NA	-4	True	AGTAAA	-26	NA	100674879	100603926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100674743
transcript_39821.nic	chr13	-	905	3	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-65	64592	19	145	5prime_fragment	FALSE	canonical	3	144	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCACGCATTTGCTGCA	NA	False	NA	NA	False	AAAACA	-30	NA	100674860	100668216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_100668795_100670359_100670570_100674743
transcript_39822.nnic	chr13	-	485	3	NNC	ENSG00000102452.18	novel	5333	20	NA	NA	56012	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	3	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAATCTTTGGGCCAATT	NA	False	NA	-4	True	AATAAA	-23	NA	101120318	101116439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_101116593_101116919_101117007_101120073
transcript_39823.known	chr13	+	1074	1	FSM	ENSG00000272143.1	ENST00000606448.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	234	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGTGTCGTGAACAGAG	7	True	NA	8	True	ATTAAA	-16	NA	102394629	102395703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102394600_102395700
transcript_39824.known	chr13	-	536	1	FSM	ENSG00000276957.1	ENST00000615349.1	536	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAAATTGTCCCGTTAT	2930	False	NA	NA	False	AATAAA	-15	NA	102593873	102593337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102593300_102593900
transcript_39825.known	chr13	+	5484	30	FSM	ENSG00000134900.12	ENST00000376052.5	5484	30	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_24	65.6734797715426	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTATTCATTTGTG	-15	True	NA	NA	False	AATAAA	-17	NA	102596985	102679958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_39829.known	chr13	+	3931	29	FSM	ENSG00000134900.12	ENST00000376065.8	3931	29	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_13	34.0503079191328	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGACGTGTGGCTTAA	2	True	NA	10	True	ATTAAA	-23	NA	102597002	102678461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_3983.known	chr1	-	1155	9	FSM	ENSG00000049089.15	ENST00000461118.6	1155	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	165.471863167126	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	40317813	40312229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315237_40315466_40315589_40315665_40317122_40317310_40317587
transcript_39836.nnic	chr13	+	2128	14	NNC	ENSG00000134900.12	novel	4341	27	NA	NA	-45	5514	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_13	73.2409495186302	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATCTTTAATTTTTGG	-2	True	NA	NA	False	AAAAAG	-9	NA	102596940	102637046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102636694
transcript_39840.nic	chr13	+	2430	13	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-62	41415	-45	5514	5prime_fragment	FALSE	canonical	3	234	junction_7	23.2598545423941	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATCTTTAATTTTTGG	-2	True	NA	NA	False	AAAAAG	-9	NA	102596940	102637046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223
transcript_39845.known	chr13	+	691	3	FSM	ENSG00000134900.12	ENST00000490010.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	160.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTGTCTTTTCTCAG	-2	True	NA	NA	False	AATAAA	-14	NA	102597032	102608022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102597204_102604792_102604922_102607631
transcript_39846.nic	chr13	+	488	3	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-62	64265	-45	6174	5prime_fragment	FALSE	canonical	3	276	junction_2	25	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGTACAATCTGGTACC	-2	True	NA	16	True	NA	NA	NA	102596940	102614196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_102597204_102604792_102604922_102614100
transcript_3985.nic	chr1	-	711	7	ISM	ENSG00000049089.15	ENST00000372748.8	2852	32	-33	11741	-33	0	5prime_fragment	FALSE	canonical	3	288	junction_5	35.5152549383125	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GCAAAAAAAAAAAAAAAGTA	-7	True	NA	NA	False	NA	NA	NA	40317319	40312229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
transcript_39851.known	chr13	-	1038	5	FSM	ENSG00000151287.17	ENST00000376021.8	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	47.0345617604757	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-14	True	NA	-1	True	ATTAAA	-23	NA	102773759	102766109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102773681
transcript_39854.known	chr13	-	828	4	FSM	ENSG00000151287.17	ENST00000376022.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	61.5377029867779	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-10	True	NA	-1	True	ATTAAA	-23	NA	102773755	102766109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102773681
transcript_39859.known	chr13	-	1362	6	FSM	ENSG00000151287.17	ENST00000376032.9	1362	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	16.1567323428966	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTCACTGAAGGCTT	2	True	NA	-1	True	AATAAA	-15	NA	102773786	102765887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_39860.known	chr13	-	959	5	FSM	ENSG00000151287.17	ENST00000376029.3	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	51.337121072378	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-23	True	NA	-1	True	ATTAAA	-23	NA	102773811	102766109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_39861.known	chr13	-	2029	10	FSM	ENSG00000134901.13	ENST00000376004.5	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	10.3112068961068	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTGTGCTAATTATTA	17	True	NA	-1	True	AATAAA	-21	NA	102798976	102784280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102784513_102786231_102786340_102787833_102787924_102789011_102789222_102790900_102791139_102791257_102791431_102793340_102793419_102793600_102793807_102796803_102797010_102798488
transcript_39865.known	chr13	+	3888	15	FSM	ENSG00000134899.24	ENST00000652225.2	3888	15	0	0	0	0	multi-exon	FALSE	non_canonical	3	56	junction_8	14.2148241104066	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTAGTGTGTGGTT	-33	True	NA	12	True	AATAAA	-20	NA	102846031	102875995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_39866.known	chr13	+	3789	11	FSM	ENSG00000134897.14	ENST00000257336.6	3789	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	8.93532316147547	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGAATGTTTTTAAAC	-28	True	NA	15	True	AATAAA	-21	NA	102799118	102841533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102799522_102805306_102805391_102807145_102807746_102816427_102816555_102821036_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
transcript_39868.known	chr13	+	4024	15	FSM	ENSG00000134899.24	ENST00000652613.1	4024	15	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	26.9254450629276	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAACTGGTGGCACGG	17	False	NA	-10	True	AATGAA	-20	NA	102845866	102875973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102846355_102852124_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_39871.nnic	chr13	+	871	3	NNC	ENSG00000272274.3	novel	948	3	NA	NA	-16	2	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	7	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTCAAAAGTATCATT	389	False	NA	NA	False	AATAAA	-18	NA	106568241	106574142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_106568343_106568435_106568573_106573509
transcript_39872.nnic	chr13	+	770	3	NNC	ENSG00000272274.3	novel	948	3	NA	NA	-16	14883	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGTGTCTGTTTCTCC	389	False	NA	NA	False	ATTAAA	-16	NA	106568241	106589023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_106568343_106568435_106568573_106588491
transcript_39875.known	chr13	-	9264	3	FSM	ENSG00000204442.4	ENST00000375915.4	9264	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	4.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTACGCCTTATTTC	-11	True	NA	NA	False	ATTAAA	-38	NA	107867496	107163509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_107170787_107210583_107210756_107865681
transcript_39876.known	chr13	-	3981	3	FSM	ENSG00000174405.15	ENST00000442234.6	3981	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTATGTTCTATTC	-1	True	NA	NA	False	AATAAA	-22	NA	108215536	108207441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_108211297_108214537_108214611_108215483
transcript_39877.nnic	chr13	+	1259	3	NNC	ENSG00000139826.6	novel	5313	2	NA	NA	74	-3891	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	60	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGCTCCTTTACGATA	66	False	NA	4	True	ATTAAA	-13	NA	108218465	108230352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_108218660_108229198_108229335_108229423
transcript_39878.known	chr13	+	5313	2	FSM	ENSG00000139826.6	ENST00000375898.4	5313	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTCTTCAGATAGTTT	-8	True	NA	11	True	AATAAA	-21	NA	108218391	108234243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_108218660_108229198
transcript_39881.known	chr13	+	2576	6	FSM	ENSG00000102524.12	ENST00000375887.9	2576	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.35646599662505	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGTCTGACTGAGTT	19	True	NA	3	True	AATAAA	-19	NA	108269717	108308478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_108270235_108270339_108270425_108286802_108286860_108303252_108303366_108303453_108303605_108306825
transcript_39886.nnic	chr13	-	1509	3	NNC	ENSG00000236242.1	novel	580	4	NA	NA	-67903	-36785	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCCCAGATCCCCTGAG	183	False	NA	NA	False	NA	NA	NA	109269386	109200686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_109201488_109267733_109267841_109268785
transcript_39887.nnic	chr13	-	1597	2	NNC	ENSG00000236242.1	novel	580	4	NA	NA	-68097	-36784	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCAGATCCCCTGAGT	NA	False	NA	NA	False	NA	NA	NA	109269580	109200685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_109201488_109268785
transcript_39888.known	chr13	-	6540	52	FSM	ENSG00000187498.16	ENST00000375820.10	6540	52	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_48	130.977524331643	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTTTTATTTTGCACT	-1	True	NA	-5	True	AATAAA	-23	NA	110307157	110148962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110150445_110152333_110152507_110155282_110155398_110161191_110161370_110162229_110162443_110163462_110163562_110164861_110164991_110166231_110166304_110167157_110167231_110169628_110169763_110170546_110170733_110172719_110172771_110173899_110173999_110174445_110174527_110174622_110174750_110175217_110175358_110176423_110176514_110176625_110176725_110176884_110177038_110177841_110177932_110178063_110178232_110178922_110179037_110179270_110179422_110181291_110181390_110182992_110183098_110183183_110183277_110186384_110186554_110187137_110187330_110192213_110192285_110192829_110192914_110195022_110195119_110198466_110198632_110200853_110200890_110201437_110201523_110203565_110203608_110205352_110205407_110205493_110205539_110206664_110206716_110206864_110206892_110207402_110207490_110208848_110208891_110209391_110209428_110209979_110210043_110210128_110210213_110211646_110211674_110211868_110211923_110212416_110212480_110212573_110212619_110213781_110213827_110213925_110214016_110242674_110242735_110306943
transcript_39890.known	chr13	+	473	4	FSM	ENSG00000134871.19	ENST00000494852.2	473	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	242.129900856728	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTGTTTACAGTGTT	NA	False	NA	3	True	AATACA	-15	NA	110467081	110473594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110467097_110469216_110469325_110472928_110473151_110473466
transcript_39891.known	chr13	-	1507	2	FSM	ENSG00000139832.5	ENST00000267328.5	1507	2	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	0	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGACTGAACTGAC	-24	True	NA	-1	True	ATTAAA	-22	NA	110561722	110523065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110524198_110561347
transcript_39896.known	chr13	+	1191	10	FSM	ENSG00000213995.12	ENST00000679389.1	1191	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	51.5018877755412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCTTGGACGGGGGAG	-5	True	NA	NA	False	AGTAAA	-2	NA	110615559	110638551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
transcript_39897.known	chr13	+	2515	10	FSM	ENSG00000213995.12	ENST00000680254.1	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	14.0905361813007	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-20	True	NA	11	True	ATTAAA	-23	NA	110615544	110639996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_39900.known	chr13	+	2692	10	FSM	ENSG00000213995.12	ENST00000309957.3	2692	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	64.8211213863026	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	-6	True	NA	8	True	ATTAAA	-20	NA	110615627	110639993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638241
transcript_39901.known	chr13	+	2559	10	FSM	ENSG00000213995.12	ENST00000680505.1	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	47.0258662734184	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-6	True	NA	11	True	ATTAAA	-23	NA	110615627	110639996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_39903.nnic	chr13	+	2394	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	51.9278345398689	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-20	True	NA	11	True	ATTAAA	-23	NA	110615544	110639996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110638377
transcript_39906.nic	chr13	+	2591	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	156	junction_1	14.8739495427408	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-20	True	NA	11	True	ATTAAA	-23	NA	110615544	110639996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_39908.known	chr13	+	2377	9	FSM	ENSG00000213995.12	ENST00000470164.2	2377	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	55.515763527128	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	26	True	NA	8	True	ATTAAA	-20	NA	110615590	110639993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_3991.known	chr1	+	2109	6	FSM	ENSG00000187801.15	ENST00000411995.6	2109	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.54312667664022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCAACTCTTAATTTT	12	True	NA	15	True	ATTAAA	-20	NA	40450106	40463718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457072_40457343_40457440_40462420
transcript_3992.known	chr1	+	2382	5	FSM	ENSG00000187801.15	ENST00000469416.1	2382	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTTCCCAACTCTTAA	7	True	NA	11	True	ATTAAA	-16	NA	40450101	40463714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457440_40462420
transcript_39921.known	chr13	+	2216	7	FSM	ENSG00000213995.12	ENST00000424185.7	2216	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.3105222077833	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	-10	True	NA	8	True	ATTAAA	-20	NA	110615554	110639993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615648_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_39923.nnic	chr13	+	2175	6	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	58.8747823775171	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	NA	False	NA	11	True	ATTAAA	-23	NA	110615489	110639996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_110615648_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_39928.nnic	chr13	+	2192	5	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	36	junction_1	65.0845603810919	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-16	True	NA	11	True	ATTAAA	-23	NA	110615548	110639996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_110615648_110634544_110634777_110635467_110635589_110637128_110637250_110638377
transcript_39934.nnic	chr13	+	2057	4	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	3	0	intron_retention	FALSE	canonical	3	21	junction_3	82.9578206078246	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	-2	True	NA	11	True	ATTAAA	-23	NA	110615562	110639996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_110615648_110634544_110634777_110635467_110635589_110638377
transcript_39937.known	chr13	-	1838	15	FSM	ENSG00000134905.17	ENST00000257347.9	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	34.4937882606627	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-7	True	NA	-9	True	ATTAAA	-14	NA	110706116	110641416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110646091_110647100_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_39947.known	chr13	+	4697	2	FSM	ENSG00000153487.13	ENST00000333219.9	4697	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCCTCTTATTATAT	17	True	NA	NA	False	AATAAA	-19	NA	110713699	110723339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110714286_110719228
transcript_3995.known	chr1	+	1976	5	FSM	ENSG00000187801.15	ENST00000484445.5	1976	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	13.0096118312577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAAACGAACATTAAAA	12	True	NA	-23	True	NA	NA	NA	40450106	40463680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40450176_40450664_40451089_40456944_40457072_40457343_40457440_40462420
transcript_39950.known	chr13	+	2870	2	FSM	ENSG00000153487.13	ENST00000375774.3	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCGTGCTTATGTGCGT	98	False	NA	14	True	AATAAA	-14	NA	110714981	110721071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110716009_110719228
transcript_39953.nnic	chr13	+	1113	2	NNC	ENSG00000153487.13	novel	2870	2	NA	NA	385	-2238	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTGAACACAGCTATTT	260	False	NA	NA	False	AATAAA	-16	NA	110715821	110717238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_110716009_110716312
transcript_39964.known	chr13	-	2495	6	FSM	ENSG00000088448.14	ENST00000267339.6	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	126.048562070339	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	118	False	110915091	-3	True	AATAAA	-16	NA	110915069	110878539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110880113_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
transcript_3997.known	chr1	+	2217	5	FSM	ENSG00000187801.15	ENST00000361584.5	2217	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5.06828373317832	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTCCCAACTCTTAAT	-6	True	NA	12	True	ATTAAA	-17	NA	40450475	40463715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40451089_40454202_40454289_40456944_40457072_40457343_40457440_40462420
transcript_39976.known	chr13	-	1193	5	FSM	ENSG00000088448.14	ENST00000310847.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	248.929081266131	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	39	True	NA	0	True	ATTAAA	-24	NA	110915006	110892691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
transcript_39978.nnic	chr13	-	1234	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	-14	-6	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	269.780466305476	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	104	False	110915091	-6	True	ATTAAA	-18	NA	110915083	110892697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
transcript_39979.known	chr13	-	997	5	FSM	ENSG00000088448.14	ENST00000465753.1	997	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	262.749405327586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCACCTTCGAGATGAG	8	True	NA	NA	False	NA	NA	NA	110915037	110892956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110893264_110900529_110900662_110906032_110906125_110910617_110910771_110914724
transcript_3998.nic	chr1	+	2438	4	NIC	ENSG00000187801.15	novel	2217	5	NA	NA	62	0	intron_retention	FALSE	canonical	3	13	junction_1	9.46337971105226	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTCCCAACTCTTAAT	74	False	NA	12	True	ATTAAA	-17	NA	40450168	40463715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_40451089_40456944_40457072_40457343_40457440_40462420
transcript_39981.nic	chr13	-	1323	5	NIC	ENSG00000088448.14	novel	997	5	NA	NA	-14	-18	combination_of_known_junctions	FALSE	canonical	3	28	junction_2	254.461195469958	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCACTGTGCCTGAATT	104	False	110915091	-18	True	ATTAAA	-6	NA	110915083	110892709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_110893264_110900529_110900695_110906032_110906125_110910617_110910771_110914724
transcript_39983.nic	chr13	-	1158	4	ISM	ENSG00000088448.14	ENST00000267339.6	2495	6	-14	14170	-14	-18	5prime_fragment	FALSE	canonical	3	259	junction_1	159.633608268713	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCACTGTGCCTGAATT	104	False	110915091	-18	True	ATTAAA	-6	NA	110915083	110892709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_110893264_110906032_110906125_110910617_110910771_110914724
transcript_39985.known	chr13	-	535	4	FSM	ENSG00000088448.14	ENST00000460846.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	277.929247591301	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTTTCCATTTC	384	False	NA	NA	False	AATAAA	-18	NA	110914803	110905022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110905234_110906032_110906125_110910617_110910771_110914724
transcript_39987.known	chr13	-	446	2	FSM	ENSG00000088448.14	ENST00000475809.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACCGCTTTGCGGGTG	8731	False	NA	NA	False	AGTAAA	-18	NA	110900739	110893027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110893264_110900529
transcript_3999.nnic	chr1	-	617	3	NNC	ENSG00000238287.1	novel	605	2	NA	NA	-50	6231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACTGTAAATGAAAATTC	-16	True	NA	NA	False	NA	NA	NA	40508711	40486925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_40487358_40493399_40493462_40508588
transcript_39995.nic	chr13	+	1849	3	ISM	ENSG00000102606.19	ENST00000491775.5	581	6	0	10825	0	-10825	5prime_fragment	FALSE	canonical	3	89	junction_1	13.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAGAAAAAAAAAGAAA	-22	True	NA	NA	False	NA	NA	NA	111153646	111206975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_111153722_111153904_111153992_111205288
transcript_4.known	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3896	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00009_+_0_1000
transcript_40.known	ERCC-00095	+	513	1	FSM	ERCC-00095A	DQ516759	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00095_+_0_500
transcript_40001.nic	chr13	+	1062	7	ISM	ENSG00000126217.21	ENST00000375608.7	3648	30	-74	32207	-74	343	5prime_fragment	FALSE	canonical	3	59	junction_3	6.04611904907235	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGCGTTGTGGTTTGCA	NA	False	NA	NA	False	NA	NA	NA	112894303	113064654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_112894432_112902198_112902372_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303
transcript_40006.nic	chr13	+	1668	3	NIC	ENSG00000126217.21	novel	1544	2	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_2	35.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCATTTGTTGTTCT	NA	False	NA	NA	False	TATAAA	-15	NA	112894303	112910619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_112894432_112902198_112902372_112909252
transcript_40007.nnic	chr13	+	730	3	NNC	ENSG00000126217.21	novel	3648	30	NA	NA	-74	19353	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	36	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTCAGAATCATTTGTC	NA	False	NA	NA	False	AATAAA	-17	NA	112894303	112929972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_112894432_112902198_112902372_112929543
transcript_40008.nnic	chr13	+	935	3	NNC	ENSG00000126217.21	novel	3648	30	NA	NA	-74	3125	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	37	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAATTTGAAAGTGTCGA	NA	False	NA	NA	False	AATAAA	-12	NA	112894303	112961289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_112894432_112902198_112902372_112960655
transcript_40010.known	chr13	+	1544	2	FSM	ENSG00000126217.21	ENST00000397036.4	1544	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCATTTGTTGTTCT	7833	False	NA	NA	False	TATAAA	-15	NA	112902194	112910619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_112902372_112909252
transcript_40011.known	chr13	+	1450	8	FSM	ENSG00000126218.12	ENST00000409306.5	1450	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	33.7499811035472	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGGCCAAGAGCCATG	-10	True	NA	-45	True	GGGGCT	-2	NA	113122813	113149462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113140918_113141051_113143850_113144096_113147378_113147493_113148915
transcript_40014.nnic	chr13	+	1436	7	NIC	ENSG00000126218.12	novel	1536	8	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	36.201979688041	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGTTTGTCTCTCGAT	NA	False	NA	22	True	ATTAAA	-17	NA	113122766	113149529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113143850_113144096_113147378_113147497_113148915
transcript_40016.nic	chr13	+	1010	4	ISM	ENSG00000126218.12	ENST00000477269.5	907	6	-52	4197	-32	-4197	5prime_fragment	FALSE	canonical	3	97	junction_2	5.65685424949238	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCCTAAGGAAAAAGATT	NA	False	NA	NA	False	AATAAA	-24	NA	113122766	113140021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356
transcript_40018.known	chr13	-	182	1	FSM	ENSG00000269125.1	ENST00000600642.1	182	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGGACTCTGTCTATGGT	NA	False	NA	NA	False	AATAAA	-22	NA	113165183	113165001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113165000_113165200
transcript_4002.known	chr1	-	605	2	FSM	ENSG00000238287.1	ENST00000450713.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCGGGTTCAAGCGAT	-2	True	NA	NA	False	NA	NA	NA	40508661	40493156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40493689_40508588
transcript_40027.known	chr13	+	1111	6	FSM	ENSG00000139842.15	ENST00000488558.2	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	537.95219118431	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAGCTTTAAACCCAA	-16	True	NA	75	True	CATAAA	-17	NA	113209599	113230212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113229641
transcript_4003.known	chr1	+	1899	4	FSM	ENSG00000164002.12	ENST00000415550.6	1899	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	7.84573486395988	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGAACTGATGGTTTTT	0	True	NA	11	True	AATAAA	-19	NA	40508766	40516038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508909_40509450_40509626_40509732_40509791_40514514
transcript_40031.known	chr13	-	1671	15	FSM	ENSG00000126226.22	ENST00000375479.6	1671	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	236.556687342655	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	NA	False	NA	-16	True	AATAAA	-21	NA	113208715	113177610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40032.known	chr13	-	1897	14	FSM	ENSG00000126226.22	ENST00000337344.9	1897	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	208.704626929484	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGCTCACTCTAGCC	-1	True	NA	59	True	AATACA	-22	NA	113208669	113177535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40033.known	chr13	-	1654	15	FSM	ENSG00000126226.22	ENST00000375477.5	1654	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	243.147641383181	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	2	True	NA	-16	True	AATAAA	-21	NA	113208666	113177610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40034.known	chr13	-	654	7	FSM	ENSG00000126226.22	ENST00000491548.5	654	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	293.602338773609	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAGAGCTGAGGGAAA	16	True	NA	NA	False	AAAAAG	-18	NA	113208652	113190702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40035.known	chr13	-	1786	15	FSM	ENSG00000126226.22	ENST00000246505.9	1786	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	236.36468709628	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-1	True	NA	-17	True	AATAAA	-20	NA	113208669	113177611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196226_113197018_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40036.known	chr13	+	2701	9	FSM	ENSG00000185896.11	ENST00000332556.5	2701	9	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_6	32.6187733521664	3284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGGAATACTATGCAG	-10	True	NA	44	True	ATTAAA	-21	NA	113297238	113323672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113297496_113306484_113306607_113309642_113309863_113310708_113310868_113319468_113319657_113320344_113320471_113321403_113321471_113321556_113321728_113322281
transcript_40042.known	chr13	-	1415	8	FSM	ENSG00000139835.14	ENST00000375431.9	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	57.4203974282339	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-19	True	NA	-2	True	NA	NA	NA	113364130	113324162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_40048.nnic	chr13	-	1275	7	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_5	99.2790679515744	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	4	True	NA	-2	True	NA	NA	NA	113364149	113324162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113363761_113363911_113364019
transcript_40049.known	chr13	-	1834	7	FSM	ENSG00000139835.14	ENST00000375430.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	31.2978522514813	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCTA	5	True	NA	NA	False	NA	NA	NA	113364148	113324844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_4005.known	chr1	+	1892	4	FSM	ENSG00000164002.12	ENST00000358527.6	1892	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	8.2192186706253	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	0	True	NA	9	True	AATAAA	-17	NA	40508740	40516036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508878_40509450_40509626_40509732_40509791_40514514
transcript_40054.known	chr13	-	1073	6	FSM	ENSG00000139835.14	ENST00000620217.4	1073	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	141.455858839427	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTGAGTGGTCACTGA	5	True	NA	-3	True	NA	NA	NA	113364148	113324163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113324578_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_40058.nnic	chr13	-	881	6	NNC	ENSG00000139835.14	novel	1415	8	NA	NA	-1	-7912	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	141.063106445307	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGTTGGTCAGTGCTGTG	4	True	NA	2	True	AATAAA	-21	NA	113364149	113332973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_113333195_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_4007.known	chr1	+	1691	3	FSM	ENSG00000164002.12	ENST00000443729.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	7.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	10	False	NA	9	True	AATAAA	-17	NA	40508797	40516036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508909_40509732_40509791_40514514
transcript_40072.nic	chr13	-	1887	3	NIC	ENSG00000139835.14	novel	877	3	NA	NA	-1	940	combination_of_known_junctions	FALSE	canonical	3	80	junction_1	156.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAATTGGTTCTGTTTGTGT	4	True	NA	-9	True	ATTAAA	-25	NA	113364149	113358676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_113360285_113363761_113363911_113364019
transcript_40073.known	chr13	-	877	3	FSM	ENSG00000139835.14	ENST00000476439.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	16	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTTTCTCTTAAATACA	-20	True	NA	NA	False	NA	NA	NA	113364131	113359616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113360285_113363761_113363911_113364071
transcript_40077.known	chr13	-	3164	8	FSM	ENSG00000150401.15	ENST00000375403.6	3164	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	28.444001555509	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	12	True	NA	-1	True	ATTAAA	-16	NA	113490691	113455818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484057_113490666
transcript_40078.known	chr13	-	3032	7	FSM	ENSG00000150401.15	ENST00000478244.6	3032	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	32.7740581693645	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-8	True	NA	-1	True	ATTAAA	-16	NA	113490711	113455818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484057_113490666
transcript_40082.nnic	chr13	+	2558	12	NNC	ENSG00000198176.13	novel	804	7	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_1	141.593119784289	262	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	0	True	NA	13	True	AATAAA	-24	NA	113584675	113641473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_113584731_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_40083.known	chr13	+	2639	12	FSM	ENSG00000198176.13	ENST00000375370.10	2639	12	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_11	59.7157177144239	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	30	True	NA	13	True	AATAAA	-24	NA	113584752	113641473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_40086.nnic	chr13	+	2436	11	NNC	ENSG00000198176.13	novel	804	7	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	112	junction_4	192.953362240724	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	0	True	NA	13	True	AATAAA	-24	NA	113584675	113641473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_113584731_113585773_113585850_113610995_113611063_113623179_113623287_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_40094.nnic	chr13	+	346	3	NNC	ENSG00000198176.13	novel	804	7	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_2	23.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGCAGCGAATCCTGCA	0	True	NA	26	True	AATAAA	-34	NA	113584675	113586180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_113584731_113585773_113585850_113585965
transcript_40095.known	chr13	+	447	3	FSM	ENSG00000198176.13	ENST00000464794.5	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	223.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGCAGCGAATCCTGCA	10	True	NA	26	True	AATAAA	-34	NA	113584732	113586180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113584889_113585773_113585850_113585965
transcript_40099.known	chr13	+	6117	9	FSM	ENSG00000184497.13	ENST00000375353.5	6117	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	10.1111015720346	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCGTATTACGTGAAGT	-24	True	NA	NA	False	TTTAAA	-16	NA	113759225	113816995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338_113799420_113800826_113800913_113801652_113801813_113804884_113805029_113811735
transcript_4010.known	chr1	+	1625	2	FSM	ENSG00000164002.12	ENST00000418186.2	1625	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	8	False	NA	9	True	AATAAA	-17	NA	40508774	40516036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508878_40514514
transcript_4011.known	chr1	+	1606	2	FSM	ENSG00000164002.12	ENST00000419161.2	1606	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	18	False	NA	9	True	AATAAA	-17	NA	40508805	40516036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508890_40514514
transcript_40110.known	chr13	+	694	5	FSM	ENSG00000184497.13	ENST00000488362.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4.9749371855331	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGTGTCCAGTTCTGT	-10	True	NA	9	True	ATTAAA	-17	NA	113759239	113799660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338
transcript_40112.nnic	chr13	+	635	4	NIC	ENSG00000184497.13	novel	694	5	NA	NA	-19	-2	combination_of_known_splicesites	TRUE	canonical	2	3	junction_3	13.1993265821489	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCACGTGTCCAGTTCT	0	True	NA	7	True	ATTAAA	-15	NA	113759206	113799658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_113759316_113766114_113766258_113769097_113769161_113799338
transcript_40114.known	chr13	+	1952	2	FSM	ENSG00000272695.2	ENST00000608651.1	1952	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCCATCGTGTGG	-12	True	NA	NA	False	AATAAA	-18	NA	113864167	113866833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113864296_113865009
transcript_40117.known	chr13	+	2156	19	FSM	ENSG00000130177.16	ENST00000375310.5	2156	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	124.776046292528	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	32	True	NA	14	True	AATAAA	-15	NA	114234978	114272675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239309_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_40119.known	chr13	+	2034	19	FSM	ENSG00000130177.16	ENST00000252457.9	2034	19	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	95.8259256396272	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	7	False	NA	14	True	AATAAA	-15	NA	114235060	114272675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_4012.known	chr1	+	2567	2	FSM	ENSG00000164002.12	ENST00000372703.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTGAACTGATGGTTTT	6	True	NA	10	True	AATAAA	-18	NA	40508746	40516037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40509791_40514514
transcript_40120.known	chr13	+	2331	18	FSM	ENSG00000130177.16	ENST00000356221.8	2331	18	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	39.3163022968536	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	12	True	NA	8	True	AATAAA	-18	NA	114234896	114272723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_40127.known	chr13	+	1991	17	FSM	ENSG00000130177.16	ENST00000252458.6	1991	17	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	124.002000361889	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	10	False	NA	8	True	AATAAA	-18	NA	114235080	114272723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_4013.known	chr1	+	1697	3	FSM	ENSG00000164002.12	ENST00000296380.9	1697	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	-6	True	NA	9	True	AATAAA	-17	NA	40508760	40516036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508878_40509732_40509791_40514514
transcript_40133.known	chr13	+	2370	10	FSM	ENSG00000169062.15	ENST00000375299.8	2370	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	103.123562466599	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGAATCTGTGTCA	1	True	NA	8	True	AATAAA	-25	NA	114281600	114305817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_40139.nic	chr13	+	853	7	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	-16	14073	-16	0	5prime_fragment	FALSE	canonical	3	172	junction_1	116.141317176772	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	-15	True	NA	53	True	AAAAAG	-35	NA	114281584	114291744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_4017.nnic	chr1	+	2142	6	NNC	ENSG00000117010.17	novel	2019	5	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	23.2258476702143	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	-12	True	NA	5	True	AATAAA	-17	NA	40531634	40548167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_40531788_40532025_40532147_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_40178.known	chr13	+	494	2	FSM	ENSG00000169062.15	ENST00000492270.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCCGTTCCGTCAAAGA	3	True	NA	NA	False	AATAAA	-16	NA	114281602	114282270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114281847_114282020
transcript_40182.known	chr13	+	2235	9	FSM	ENSG00000169062.15	ENST00000351487.5	2235	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	108.88526071053	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	-6	True	NA	-1	True	AATAAA	-16	NA	114281627	114305808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_40183.known	chr13	+	699	6	FSM	ENSG00000169062.15	ENST00000484246.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	157.83966548368	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAATTGCAGAGAAA	11	True	NA	66	True	GATAAA	-2	NA	114281644	114291757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114281847_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_40184.known	chr14	-	4737	10	FSM	ENSG00000136319.12	ENST00000258821.8	4737	10	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_5	13.3175832901979	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTTCATTTTCTT	-1	True	NA	1	True	TATAAA	-34	NA	20305951	20286226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
transcript_40185.known	chr14	-	1755	10	FSM	ENSG00000136319.12	ENST00000383029.7	1755	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	67.7655726715725	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGTAGTTTGGCCTGC	9	True	NA	NA	False	ATTAAA	-23	NA	20305941	20289130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300674_20300819_20301832_20301966_20305886
transcript_4019.known	chr1	+	2102	6	FSM	ENSG00000117010.17	ENST00000648542.1	2102	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.9198662203617	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAGTTGAGGAAAAGAA	NA	False	NA	-52	True	NA	NA	NA	40531572	40548110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40531788_40532732_40532809_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_40193.known	chr14	-	1613	7	FSM	ENSG00000100814.18	ENST00000398160.6	1613	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	183.496972424312	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	301	False	NA	-10	True	AATAAA	-22	NA	20333010	20311367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20332843
transcript_40194.known	chr14	-	1305	6	FSM	ENSG00000100814.18	ENST00000353689.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	196.419347315889	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-1	True	NA	-10	True	AATAAA	-22	NA	20333312	20311367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20333253
transcript_40199.known	chr14	-	1470	7	FSM	ENSG00000100814.18	ENST00000358932.9	1470	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_6	119.686627861632	5354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	3	True	NA	-12	True	AATAAA	-20	NA	20333279	20311369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_4020.known	chr1	+	1028	5	FSM	ENSG00000117010.17	ENST00000372697.7	1028	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	16.9926454679664	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGCCAGGCTGATT	16	True	NA	NA	False	NA	NA	NA	40531662	40545037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40544396
transcript_40200.known	chr14	-	1686	8	FSM	ENSG00000100814.18	ENST00000437553.6	1686	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	224.943711780053	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-1	True	NA	-10	True	AATAAA	-22	NA	20333312	20311367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317793_20317975_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_40201.known	chr14	-	1631	7	FSM	ENSG00000100814.18	ENST00000398169.7	1631	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	237.946772759512	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	3931	False	NA	-12	True	AATAAA	-20	NA	20329380	20311369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317794_20317975_20325538_20325654_20326715_20326794_20329173
transcript_40209.known	chr14	+	1827	16	FSM	ENSG00000129484.14	ENST00000429687.8	1827	16	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_8	31.1508159336691	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	10	True	NA	14	True	AATAAA	-16	NA	20343634	20357904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_4021.known	chr1	+	2019	5	FSM	ENSG00000117010.17	ENST00000372699.8	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	9.54921462739214	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	-10	True	NA	5	True	AATAAA	-17	NA	40531636	40548167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_40211.nic	chr14	+	1887	16	NIC	ENSG00000129484.14	novel	1827	16	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_8	80.6372949281741	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	6	False	NA	14	True	AATAAA	-16	NA	20343548	20357904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354834_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_40214.known	chr14	+	1886	16	FSM	ENSG00000129484.14	ENST00000250416.9	1886	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	85.702482785247	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	-10	True	NA	14	True	AATAAA	-16	NA	20343614	20357904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_40217.nic	chr14	+	2029	15	ISM	ENSG00000129484.14	ENST00000429687.8	1827	16	-86	1	-66	0	intron_retention	FALSE	canonical	3	242	junction_8	31.5762762923337	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGGCTTCTTCGGGCT	6	False	NA	13	True	AATAAA	-15	NA	20343548	20357903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395
transcript_40233.nnic	chr14	+	1621	14	NIC	ENSG00000129484.14	novel	1886	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	89.1337669032722	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	-11	True	NA	14	True	AATAAA	-16	NA	20343613	20357904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_20343688_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_40252.known	chr14	-	581	2	FSM	ENSG00000129566.13	ENST00000556549.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTCAACCTGCCCTAT	38	True	NA	NA	False	NA	NA	NA	20413429	20407941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20408464_20413370
transcript_40253.known	chr14	-	1696	7	FSM	ENSG00000165782.11	ENST00000398020.6	1696	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	77.454646227468	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	11	False	NA	-16	True	AATAAA	-17	NA	20461465	20457857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
transcript_40254.known	chr14	-	1821	7	FSM	ENSG00000165782.11	ENST00000250489.9	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	56.1735900777422	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATAAAAAATCTTG	-3	True	NA	NA	False	TTTAAA	-11	NA	20461434	20457680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461183
transcript_40258.known	chr14	+	899	5	FSM	ENSG00000100823.12	ENST00000553681.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	80	junction_1	916.628162070095	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTGGACTTATATGA	10	False	NA	NA	False	NA	NA	NA	20455200	20457342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455241_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40261.known	chr14	+	640	5	FSM	ENSG00000100823.12	ENST00000557592.5	640	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1034.23147795839	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCGCAAGTTCCTG	13	True	NA	NA	False	NA	NA	NA	20455247	20457119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455339_20455734_20455774_20455913_20456102_20456667_20456861_20456990
transcript_40262.known	chr14	+	773	5	FSM	ENSG00000100823.12	ENST00000556054.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	2	80	junction_1	916.628162070095	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGAGGTCTGGTACGA	12	True	NA	NA	False	NA	NA	NA	20455246	20457074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455429_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40269.known	chr14	+	654	4	FSM	ENSG00000100823.12	ENST00000554813.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	996.967513122781	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCCTGGCTTCCCGAAA	-20	True	NA	NA	False	NA	NA	NA	20455214	20457139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455339_20455913_20456102_20456667_20456861_20456990
transcript_40270.known	chr14	+	831	4	FSM	ENSG00000100823.12	ENST00000557365.1	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	971.559685362779	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTAGGCACCTCTAC	22	True	NA	NA	False	NA	NA	NA	20455256	20457302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455395_20455913_20456102_20456667_20456861_20456990
transcript_40274.known	chr14	+	1453	5	FSM	ENSG00000100823.12	ENST00000216714.8	1453	5	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	323.839755897882	10470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	-9	True	NA	18	True	AATAAA	-15	NA	20455225	20457767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40275.known	chr14	+	1803	3	FSM	ENSG00000100823.12	ENST00000557159.5	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_1	74	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	5	True	NA	-11	True	TTTAAA	-43	NA	20455239	20457738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20456102_20456667_20456861_20456990
transcript_40276.known	chr14	+	1603	4	FSM	ENSG00000100823.12	ENST00000553555.5	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	2038	junction_2	117.995291808143	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCCACATGAAAATAAAG	-9	True	NA	-15	True	TTTAAA	-39	NA	20455225	20457734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40277.known	chr14	+	1387	5	FSM	ENSG00000100823.12	ENST00000398030.8	1387	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	951.061085051849	3567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	-9	True	NA	18	True	AATAAA	-15	NA	20455225	20457767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455329_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40278.known	chr14	+	568	4	FSM	ENSG00000100823.12	ENST00000554325.1	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	819.32167065201	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGATATACTGTGCCTT	-8	True	NA	NA	False	NA	NA	NA	20455226	20456683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455395_20455577_20455774_20455913_20456102_20456667
transcript_40282.known	chr14	+	1477	6	FSM	ENSG00000198805.12	ENST00000361505.10	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	30.2416930742973	3470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTGTGTAACT	-1	True	NA	57	True	AATAAA	-17	NA	20469405	20477089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20469536_20472307_20472478_20474471_20474576_20474772_20474949_20475061_20475253_20476383
transcript_40283.known	chr14	+	1635	5	FSM	ENSG00000198805.12	ENST00000554056.5	1635	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	28.7608675112556	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTGTCAGAATAAAGAGAA	7	True	NA	26	True	NA	NA	NA	20469413	20477058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20469536_20472307_20472478_20474471_20474949_20475061_20475253_20476383
transcript_40285.known	chr14	-	915	4	FSM	ENSG00000258451.1	ENST00000554286.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTGCTCTCTGACACG	NA	False	NA	NA	False	NA	NA	NA	20707120	20693479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20693750_20699035_20699130_20699321_20699499_20706746
transcript_40286.known	chr14	+	1498	3	FSM	ENSG00000259171.1	ENST00000553909.1	1498	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCTAAACCGAAGGTACC	1	True	NA	-9	True	AATAAA	-1	NA	20684586	20700576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20684759_20693546_20693651_20699354
transcript_40289.known	chr14	+	2061	2	FSM	ENSG00000258818.4	ENST00000555835.3	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-26	True	NA	NA	False	ATTAAA	-22	NA	20684559	20701216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20684759_20699354
transcript_4029.nic	chr1	+	708	4	NIC	ENSG00000117010.17	novel	1028	5	NA	NA	13	-358	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	24.1660919471891	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTATGAAACATTTCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	40531585	40544679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_40531788_40540585_40540713_40541614_40541711_40544396
transcript_40290.known	chr14	+	1222	2	FSM	ENSG00000214274.10	ENST00000336811.10	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTCTCACTGATT	NA	False	NA	26	True	AATAAA	-27	NA	20684176	20694186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20684759_20693546
transcript_40291.known	chr14	+	853	2	FSM	ENSG00000258818.4	ENST00000397995.2	853	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATGTAGTATTTCA	-3	True	NA	NA	False	NA	NA	NA	20684582	20700093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20684697_20699354
transcript_40292.known	chr14	+	932	2	FSM	ENSG00000181562.5	ENST00000326842.3	932	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGCTTATATATGTTA	-3	True	NA	NA	False	AATAAA	-19	NA	20745886	20748380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20745993_20747554
transcript_40293.known	chr14	+	844	2	FSM	ENSG00000169413.3	ENST00000304677.3	844	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGTGTTTGAGATCC	-2	True	NA	NA	False	AATAAA	-23	NA	20781267	20782467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20781339_20781694
transcript_40299.nnic	chr14	-	1082	3	NNC	ENSG00000129538.14	novel	878	3	NA	NA	-25279	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.5	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTCTGAAGCGGTTC	-11	False	NA	-11	True	AATAAA	-16	NA	20828134	20801360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_20802094_20802796_20803002_20827990
transcript_4030.known	chr1	+	562	4	FSM	ENSG00000117010.17	ENST00000465152.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	22.365648262955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAATAGAAGTTATACT	6	True	NA	NA	False	TATAAA	-41	NA	40531652	40546765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40531788_40540585_40540713_40541614_40541711_40546561
transcript_40300.nnic	chr14	-	923	2	NNC	ENSG00000129538.14	novel	914	2	NA	NA	-25325	-5	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTCTGAAGCGGTTC	NA	False	NA	-11	True	AATAAA	-16	NA	20828180	20801360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_20802094_20827990
transcript_40303.known	chr14	+	1529	14	FSM	ENSG00000165792.18	ENST00000557550.6	1529	14	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	138.651408279006	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGAAGAATGGAAG	14	True	NA	-2	True	AATAAA	-5	NA	20990002	20997016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_40305.known	chr14	+	1539	14	FSM	ENSG00000165792.18	ENST00000339374.11	1539	14	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_13	81.8069599620035	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	-9	True	NA	17	True	AATAAA	-24	NA	20989979	20997035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_40306.known	chr14	+	1500	14	FSM	ENSG00000165792.18	ENST00000556670.6	1500	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_13	157.842105211236	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGATTTTGTGATT	-2	True	NA	12	True	AATAAA	-19	NA	20989986	20997030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996811
transcript_40309.known	chr14	+	1605	13	FSM	ENSG00000165792.18	ENST00000555533.6	1605	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	135.274489464939	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	5	True	NA	-8	True	NA	NA	NA	20989993	20997010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_40314.known	chr14	+	1586	13	FSM	ENSG00000165792.18	ENST00000382985.8	1586	13	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	62.3698645180507	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATTTTTGAAGA	-9	True	NA	-9	True	NA	NA	NA	20989979	20997009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_40346.known	chr14	+	2887	10	FSM	ENSG00000165792.18	ENST00000555640.6	2887	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	154.438369185068	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTTTTAATAATAAATAA	5	True	NA	-23	True	NA	NA	NA	20989993	20996995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20994064_20994542_20994614_20994793_20995234_20995900_20996293_20996526
transcript_40347.known	chr14	+	952	5	FSM	ENSG00000165792.18	ENST00000553389.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_4	97.1914991138628	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGATTTTGTGATT	4859	False	NA	12	True	AATAAA	-19	NA	20994847	20997030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_40354.known	chr14	-	2079	17	FSM	ENSG00000165795.25	ENST00000397853.7	2079	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_16	48.0245705342588	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9711	False	NA	-11	True	AATAAA	-17	NA	21025094	21016771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025028
transcript_40356.nic	chr14	-	2157	17	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_16	52.1508853592151	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9268	False	NA	-11	True	AATAAA	-17	NA	21025537	21016771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025393
transcript_40358.known	chr14	-	2122	17	FSM	ENSG00000165795.25	ENST00000298687.9	2122	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_16	51.3516902715967	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	9029	False	NA	-2	True	AATAAA	-26	NA	21025776	21016762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025676
transcript_40363.known	chr14	-	2022	16	FSM	ENSG00000165795.25	ENST00000397851.6	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_15	50.6173444142969	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	9700	False	NA	-12	True	AATAAA	-16	NA	21025105	21016772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025028
transcript_40364.known	chr14	-	2054	16	FSM	ENSG00000165795.25	ENST00000397858.5	2054	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	52.9815900940024	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGTCTAGGTGT	9029	False	NA	-3	True	AATAAA	-25	NA	21025776	21016763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
transcript_40365.known	chr14	-	2162	16	FSM	ENSG00000165795.25	ENST00000553503.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_15	59.8917542089245	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9766	False	NA	-11	True	AATAAA	-17	NA	21025039	21016771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21024848
transcript_40366.nic	chr14	-	2055	16	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_15	53.1927313330183	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	9693	False	NA	-11	True	AATAAA	-17	NA	21025112	21016771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025028
transcript_40368.known	chr14	-	2127	16	FSM	ENSG00000165795.25	ENST00000350792.7	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	56.377142728434	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	8982	False	NA	-2	True	AATAAA	-26	NA	21025823	21016762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025676
transcript_40371.known	chr14	-	2084	16	FSM	ENSG00000165795.25	ENST00000397847.6	2084	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.5091291763195	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	8957	False	NA	-12	True	AATAAA	-16	NA	21025848	21016772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018795_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
transcript_40374.known	chr14	-	1980	15	FSM	ENSG00000165795.25	ENST00000554143.5	1980	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	56.1126781847135	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	9700	False	NA	-12	True	AATAAA	-16	NA	21025105	21016772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025028
transcript_40375.known	chr14	-	2047	15	FSM	ENSG00000165795.25	ENST00000360463.7	2047	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	58.3826662142602	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	8986	False	NA	-11	True	AATAAA	-17	NA	21025819	21016771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025676
transcript_40385.known	chr14	+	1526	8	FSM	ENSG00000232070.9	ENST00000418511.6	1526	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.56696210375594	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCGCTGTTGGATGTGCT	102	False	NA	15	True	AATAAA	-20	NA	21098936	21103724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21099199_21101076_21101185_21101307_21101452_21101864_21101976_21102063_21102121_21102404_21102516_21102632_21102780_21103138
transcript_40397.known	chr14	+	469	3	FSM	ENSG00000258604.1	ENST00000532213.2	469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTATGTTGTCCACA	-3	True	NA	NA	False	NA	NA	NA	21024295	21029271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21024345_21028445_21028535_21028940
transcript_4040.known	chr1	+	1536	11	FSM	ENSG00000066136.21	ENST00000425457.6	1536	11	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_8	102.68417599611	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATATTTCTCCTTTTG	-2	True	NA	37	True	ATTAAA	-38	NA	40691715	40771139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40766917_40766975_40769355_40769416_40770708
transcript_40400.known	chr14	+	478	2	FSM	ENSG00000258604.1	ENST00000533984.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTTCATTAACTGCTG	1731	False	NA	NA	False	AAAACA	-21	NA	21024171	21029245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21024345_21028940
transcript_40402.known	chr14	+	358	2	FSM	ENSG00000178107.2	ENST00000320322.2	358	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGTATTTTATCAA	4126	False	NA	NA	False	AATAAA	-23	NA	21108042	21116703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21108160_21116462
transcript_40416.known	chr14	-	1371	8	FSM	ENSG00000092199.19	ENST00000557201.5	1371	8	0	0	0	0	multi-exon	FALSE	canonical	3	1374	junction_5	2312.16265051769	6509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	5	True	NA	-9	True	AATAAA	-19	NA	21269425	21210936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21269297
transcript_40417.known	chr14	-	1252	8	FSM	ENSG00000092199.19	ENST00000556897.5	1252	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	2287.77931717236	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAATAAAAAGGATGTA	6779	False	NA	-38	True	NA	NA	NA	21262677	21210965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21262600
transcript_40418.known	chr14	-	1924	10	FSM	ENSG00000092199.19	ENST00000554969.5	1924	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	2639.84309765693	6466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	5	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
transcript_40419.known	chr14	-	1790	8	FSM	ENSG00000092199.19	ENST00000553753.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	4459	junction_7	927.078734300295	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTATTAAACCAGGAAT	53	False	NA	-61	True	AATAAA	-4	NA	21269403	21210581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_40420.known	chr14	-	1658	9	FSM	ENSG00000092199.19	ENST00000555914.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	2080.07998644283	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	52	False	NA	-92	True	NA	NA	NA	21269404	21210612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_40421.known	chr14	-	1599	8	NNC	ENSG00000092199.19	novel	4501	8	NA	NA	-2823	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	2342.28310040631	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAACCCTGGTTTT	NA	False	NA	-35	True	AATAAA	-30	NA	21234245	21210555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_21211236_21211237_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952
transcript_40422.known	chr14	-	1308	8	FSM	ENSG00000092199.19	ENST00000557442.5	1308	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2245.63003295244	3174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTACAGTTCTTTTCAT	6	True	NA	24	True	NA	NA	NA	21269424	21210903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213045_21230957_21231073_21233952_21234230_21263310_21263337_21269297
transcript_40423.known	chr14	-	1156	8	FSM	ENSG00000092199.19	ENST00000556628.5	1156	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2329.20444507106	5929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGTTATGCAG	46	False	NA	5	True	AATAAA	-33	NA	21269410	21210922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21234077_21234230_21263310_21263337_21269297
transcript_40424.known	chr14	-	1039	9	FSM	ENSG00000092199.19	ENST00000554383.5	1039	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	2717.1441090555	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGATGACCAGGTGAAAAC	-12	True	NA	NA	False	AATGAA	-7	NA	21269442	21211417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21268622_21268669_21269297
transcript_40425.known	chr14	-	929	2	FSM	ENSG00000092199.19	ENST00000555127.1	929	2	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACTGAAAAGAATTTTA	67	False	NA	NA	False	NA	NA	NA	21269389	21262992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21263830_21269297
transcript_40426.known	chr14	-	1182	8	FSM	ENSG00000092199.19	ENST00000555883.5	1182	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2662.41977554714	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCAAAATAATCTCT	56	False	NA	-5	True	AATAAA	-23	NA	21269400	21210932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211904_21213068_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_40432.known	chr14	-	915	2	FSM	ENSG00000092201.10	ENST00000555943.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTTGAGAAAAATGATCA	-9	True	NA	0	True	AATAAA	-23	NA	21383981	21382974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21383770_21383861
transcript_40435.known	chr14	-	4433	26	FSM	ENSG00000092201.10	ENST00000216297.7	4433	26	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_10	155.60690987228	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	-11	True	NA	-10	True	AATAAA	-32	NA	21384019	21351475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_40438.known	chr14	-	8467	38	FSM	ENSG00000100888.15	ENST00000646647.2	8467	38	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_36	23.7391165328845	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACTCTTCCTTTGTTCT	-29	True	NA	-30	True	AATAAA	-16	NA	21456123	21385198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21456031
transcript_40443.known	chr14	-	1146	1	FSM	ENSG00000100888.15	ENST00000557727.1	1146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACTCTTCCTTTGTTCT	NA	False	NA	-30	True	AATAAA	-16	NA	21386344	21385198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21385200_21386300
transcript_40444.known	chr14	-	1104	7	FSM	ENSG00000100888.15	ENST00000642518.1	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	22.0655588845805	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAGGACCTGGATAT	2	True	NA	-36	True	NA	NA	NA	21437275	21415871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21431810_21431859_21436900_21436966_21437193
transcript_40445.known	chr14	-	543	2	FSM	ENSG00000100888.15	ENST00000553283.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAAATCCAGATTGTA	4	True	NA	NA	False	NA	NA	NA	21437244	21429136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21429336_21436900
transcript_4045.nic	chr1	+	2373	10	NIC	ENSG00000066136.21	novel	1955	10	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	72.6265604579386	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	-21	True	NA	24	True	AATAAA	-16	NA	40691597	40771603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_4046.known	chr1	+	1911	10	FSM	ENSG00000066136.21	ENST00000456393.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	84.0860817008527	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGAGTCTGGGTTTCT	25	True	NA	22	True	AATAAA	-14	NA	40691742	40771601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770711
transcript_40460.known	chr14	-	1318	9	FSM	ENSG00000129472.15	ENST00000649801.1	1318	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	15.0950115932383	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCATATGTCTATTTATA	26	True	NA	NA	False	NA	NA	NA	21476909	21459667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21460341_21461238_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_40479.known	chr14	-	2914	8	FSM	ENSG00000129472.15	ENST00000397762.6	2914	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	6.88091118788131	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	-24	True	NA	-5	True	ATTAAA	-22	NA	21476959	21459019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_40500.known	chr14	-	802	2	FSM	ENSG00000165819.12	ENST00000367606.7	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTTGCCCAGGCTGG	-9	True	NA	NA	False	AATAAA	-13	NA	21511340	21507650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21508236_21511123
transcript_40502.known	chr14	-	545	2	FSM	ENSG00000165819.12	ENST00000545788.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTGGCACTGGGTGTT	-11	True	NA	NA	False	AATGAA	-36	NA	21511342	21510654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21510981_21511123
transcript_40504.known	chr14	+	3633	7	FSM	ENSG00000092203.15	ENST00000613005.4	3633	7	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_4	47.2710858300881	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAAAAGAATGTAGCGG	-37	True	NA	NA	False	NA	NA	NA	21477181	21496227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21477285_21477495_21477565_21487450_21488851_21489172_21489404_21492295_21492377_21492507_21493258_21495228
transcript_40505.known	chr14	-	1980	11	FSM	ENSG00000165819.12	ENST00000298717.9	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	75.923382432555	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-9	True	NA	-25	True	AATAAA	-21	NA	21511340	21498137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_40506.known	chr14	-	2124	9	FSM	ENSG00000165819.12	ENST00000543235.5	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	153.692824734924	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTAAATAAACATTT	21	True	NA	-60	True	NA	NA	NA	21511310	21498172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501825_21503172_21503578_21503663_21503882_21511123
transcript_40507.known	chr14	-	2030	10	FSM	ENSG00000165819.12	ENST00000537163.5	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	147.916225873104	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	-9	True	NA	-49	True	TTTAAA	-1	NA	21511340	21498161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503292_21503505_21503578_21503663_21503882_21511123
transcript_40508.known	chr14	-	1592	4	FSM	ENSG00000165819.12	ENST00000536201.5	1592	4	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_1	70.2329457353646	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCCTTTTTATTTTCCC	-9	True	NA	NA	False	NA	NA	NA	21511340	21501151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21501904_21503172_21503578_21503663_21503882_21511123
transcript_40511.known	chr14	-	1466	3	FSM	ENSG00000165821.12	ENST00000611430.4	1466	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	157.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAGTGTGCAGAGGTG	9886	False	NA	NA	False	NA	NA	NA	21526500	21521536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21522245_21525336_21525655_21526060
transcript_40512.known	chr14	-	1566	3	FSM	ENSG00000165821.12	ENST00000613414.4	1566	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	308	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTATGTGTTTCTCC	4	True	NA	-6	True	ATTAAA	-13	NA	21536934	21521082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21522245_21525336_21525655_21536848
transcript_40513.known	chr14	-	553	2	FSM	ENSG00000165821.12	ENST00000541965.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTCCACCACCCCCTCC	-9	True	NA	NA	False	NA	NA	NA	21537104	21525244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21525655_21536961
transcript_40514.known	chr14	-	4861	2	FSM	ENSG00000165821.12	ENST00000537235.2	4861	2	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	6	True	NA	-3	True	ATTAAA	-16	NA	21526346	21521079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21525655_21526060
transcript_40515.known	chr14	-	4942	2	FSM	ENSG00000165821.12	ENST00000614342.1	4942	2	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATGTGTTTCTCCTT	3	True	NA	-4	True	ATTAAA	-15	NA	21537216	21521080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21525655_21536848
transcript_40516.known	chr14	+	519	2	FSM	ENSG00000211777.2	ENST00000390425.2	519	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGATAGGGGCTGCAG	7	True	NA	NA	False	NA	NA	NA	21723712	21724321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21723935_21724024
transcript_4052.known	chr1	+	2363	10	FSM	ENSG00000066136.21	ENST00000372652.5	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	92.0962995731193	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	11	True	NA	24	True	AATAAA	-16	NA	40709356	40771603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_40520.known	chr14	+	440	2	FSM	ENSG00000211798.3	ENST00000390446.3	440	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGGGAGGGACTGCAG	33	False	NA	NA	False	NA	NA	NA	22003105	22003673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22003257_22003384
transcript_40521.known	chr14	+	337	2	FSM	ENSG00000259092.1	ENST00000557168.1	337	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGATACCCAGGCCTC	34	False	NA	NA	False	NA	NA	NA	22168428	22168988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22168481_22168703
transcript_40523.nnic	chr14	+	785	3	NNC	ENSG00000277734.8	novel	978	4	NA	NA	2799	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGCCTCTGTTTGACT	7	False	NA	18	True	ATTAAA	-19	NA	22550304	22552156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_22550430_22550556_22550665_22551604
transcript_40524.nic	chr14	+	881	2	ISM	ENSG00000277734.8	ENST00000611116.2	978	4	2830	0	2830	0	3prime_fragment	FALSE	canonical	2	6	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGCCTCTGTTTGACT	-10	True	NA	18	True	ATTAAA	-19	NA	22550335	22552156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_22550665_22551604
transcript_40525.known	chr14	-	386	3	FSM	ENSG00000259054.1	ENST00000557232.1	386	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGCCTCAGGCCTGTGT	7999	False	NA	NA	False	AATATA	-20	NA	22557062	22556310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22556523_22556791_22556854_22556950
transcript_4053.known	chr1	+	1202	10	FSM	ENSG00000066136.21	ENST00000372651.5	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	71.5227668147668	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAGGACACTGGTGCAC	60	False	NA	NA	False	NA	NA	NA	40709542	40770940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_40538.known	chr14	-	501	3	FSM	ENSG00000129562.11	ENST00000543337.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	911.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAACTTTCTAACAAAC	-25	True	NA	-109	True	NA	NA	NA	22589222	22565003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22565138_22575058_22575234_22589030
transcript_40541.known	chr14	-	684	3	FSM	ENSG00000129562.11	ENST00000250498.9	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	1746	junction_2	46	18279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-27	True	NA	-12	True	ATTAAA	-20	NA	22589224	22564906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22565138_22575058_22575234_22588946
transcript_40542.known	chr14	-	441	2	FSM	ENSG00000129562.11	ENST00000538631.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATGCCTCTGGCTCTGT	40	True	NA	-13	True	ATTAAA	-45	NA	22589157	22564907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22565138_22588946
transcript_40547.known	chr14	+	3366	7	FSM	ENSG00000100439.11	ENST00000428304.7	3051	7	-63	-252	-53	252	multi-exon	FALSE	canonical	3	183	junction_1	30.4671954731642	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCTGTGTCTTCTCTGA	8732	False	NA	NA	False	AATATA	-25	NA	22598236	22613215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22603924_22604080_22606421_22606534_22609723_22609911_22610858
transcript_40549.known	chr14	+	1003	6	FSM	ENSG00000100439.11	ENST00000418446.6	1003	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.6787737014567	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAACAGGACGACAGTG	20	True	NA	NA	False	NA	NA	NA	22598303	22611074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22598330_22601666_22601756_22603389_22603763_22606421_22606534_22609723_22609911_22610858
transcript_40552.nnic	chr14	+	662	4	NNC	ENSG00000100439.11	novel	1003	6	NA	NA	-18	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	102.059895268525	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTGGGGATGATGTTTAA	-12	True	NA	18	True	AATAAA	-18	NA	22598271	22612359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_22598330_22601666_22601756_22603389_22603666_22612120
transcript_40557.known	chr14	+	1750	10	FSM	ENSG00000155463.14	ENST00000358043.5	1750	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.334640229365	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGCCAAGTGATCTT	28	False	NA	-29	True	NA	NA	NA	22766718	22771730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22767052_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_40567.known	chr14	-	380	2	FSM	ENSG00000258458.8	ENST00000554730.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAAGCCACTAAGTTGT	23	False	NA	NA	False	AATAAA	-14	NA	22766530	22764384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22764658_22766423
transcript_40569.known	chr14	+	1679	9	FSM	ENSG00000155463.14	ENST00000495424.5	1679	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	266.573131382366	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAGAGTTAGTAAACCT	12	True	NA	-5	True	NA	NA	NA	22766702	22771754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769796_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_40570.known	chr14	+	1596	8	FSM	ENSG00000155463.14	ENST00000481218.1	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_2	27.1946873563232	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAGTAAACCTCTGTACT	369	False	NA	2	True	NA	NA	NA	22767281	22771761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22767410_22767957_22768172_22769790_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_40571.known	chr14	+	1224	3	FSM	ENSG00000155463.14	ENST00000483939.6	1224	3	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_1	26.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTTTTTAAACGGAG	NA	False	NA	NA	False	NA	NA	NA	22766674	22768929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22766765_22767247_22767410_22767957
transcript_40572.known	chr14	-	2272	11	FSM	ENSG00000155465.20	ENST00000555702.5	2272	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	7.93977329651168	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTGGCTTCATTTTA	9997	False	NA	-3	True	AATAAA	-17	NA	22819811	22773221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22819637
transcript_40575.known	chr14	-	2447	10	FSM	ENSG00000155465.20	ENST00000397532.9	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	5.22812904711937	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGAGTGGCTTCATT	13	True	NA	-6	True	AATAAA	-14	NA	22815803	22773224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319
transcript_40583.known	chr14	+	362	4	FSM	ENSG00000172590.18	ENST00000556654.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_1	712.082860347025	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	-6	True	NA	23	True	AATAAA	-25	NA	22829886	22834346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22829941_22830186_22830255_22833417_22833483_22834171
transcript_40585.known	chr14	+	398	5	FSM	ENSG00000172590.18	ENST00000556840.5	398	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	679.937680967896	6397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	28	False	NA	24	True	AATAAA	-26	NA	22829920	22834347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22833417_22833483_22834171
transcript_40586.known	chr14	+	333	4	FSM	ENSG00000172590.18	ENST00000397505.2	333	4	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_3	731.407015431369	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	20	False	NA	24	True	AATAAA	-26	NA	22829912	22834347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22834171
transcript_40587.known	chr14	+	922	3	FSM	ENSG00000172590.18	ENST00000557221.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	888.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGCGAGACTCCGTCTCA	21	False	NA	NA	False	NA	NA	NA	22829913	22834828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22830111_22830186_22830255_22834171
transcript_40589.known	chr14	+	3701	10	FSM	ENSG00000157227.14	ENST00000311852.11	3701	10	0	0	0	0	multi-exon	TRUE	canonical	2	47	junction_5	7.09372875533883	654	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	-16	True	NA	13	True	AATAAA	-13	NA	22836584	22847758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842409_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_40597.known	chr14	-	2418	17	FSM	ENSG00000100462.16	ENST00000397441.6	2418	17	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_16	200.107432083369	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-20	True	NA	-1	True	AATAAA	-24	NA	22929401	22920524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929166
transcript_40599.known	chr14	-	2271	16	FSM	ENSG00000100462.16	ENST00000216350.12	2271	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_14	279.503241881418	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACCATGCTGCCCCCTGC	-10	True	NA	-6	True	AATAAA	-19	NA	22929391	22920529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929166
transcript_40603.known	chr14	-	10007	14	FSM	ENSG00000100461.18	ENST00000359890.8	10007	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_11	59.8731400496774	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGGAGTGAGGGTTT	1	True	NA	NA	False	AATAAA	-19	NA	22919149	22893203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
transcript_4061.known	chr1	-	1687	1	FSM	ENSG00000272145.1	ENST00000606277.1	1687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAAGTTACTT	13	True	NA	NA	False	NA	NA	NA	40692066	40690379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40690400_40692100
transcript_40611.known	chr14	-	2430	13	FSM	ENSG00000100461.18	ENST00000399922.6	2430	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	32.9363864981506	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAAGCCTCCTCCTTGTGG	7245	False	NA	-32	True	CATAAA	-41	NA	22919182	22900765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_40615.known	chr14	-	1907	13	FSM	ENSG00000100462.16	ENST00000397440.8	1907	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	316.916425628798	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	25	False	NA	-5	True	AATAAA	-20	NA	22929356	22920528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22928125_22928212_22928496_22928616_22929166
transcript_40616.known	chr14	-	1743	12	FSM	ENSG00000100461.18	ENST00000542016.6	1743	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	66.8529903149409	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAAGGAAAACCCTTAG	7249	False	NA	NA	False	NA	NA	NA	22919178	22901335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22911327_22911404_22918998
transcript_4062.known	chr1	+	1455	11	FSM	ENSG00000066136.21	ENST00000372654.5	1455	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.468381167038	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACATATTTATGGCATTTT	58	False	NA	0	True	ATTAAA	-9	NA	40691837	40771102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40691868_40712686_40712822_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_40623.known	chr14	-	328	2	FSM	ENSG00000100461.18	ENST00000553777.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAAAAAACTACCA	7340	False	NA	NA	False	AATACA	-20	NA	22919087	22917563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22917803_22918998
transcript_40625.known	chr14	-	2304	17	FSM	ENSG00000100462.16	ENST00000324366.13	2304	17	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_14	62.9522388402509	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	5	True	NA	-5	True	AATAAA	-20	NA	22929376	22920528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_40626.known	chr14	-	337	3	FSM	ENSG00000100462.16	ENST00000557443.5	337	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	401.5	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	7141	False	NA	-5	True	AATAAA	-20	NA	22922240	22920528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22920732_22920987_22921057_22922175
transcript_40627.known	chr14	-	590	4	FSM	ENSG00000100461.18	ENST00000556838.5	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	14.2672897060218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAAAAGCTCCTGCCCA	7718	False	NA	NA	False	NA	NA	NA	22902432	22901579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186
transcript_40628.known	chr14	-	563	2	FSM	ENSG00000100462.16	ENST00000556426.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCTGAACCTTATTCA	5	True	NA	NA	False	ACTAAA	-13	NA	22929376	22928262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22928616_22929166
transcript_40629.nic	chr14	-	1807	10	NIC	ENSG00000092036.19	novel	1642	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	37	junction_9	80.367827234043	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-8	True	NA	-32	True	AATAAA	-12	NA	22957149	22946235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_40631.known	chr14	-	1586	10	FSM	ENSG00000092036.19	ENST00000541587.6	1586	10	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_9	52.635011583968	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-6	True	NA	-24	True	AATAAA	-20	NA	22957090	22946227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_40634.known	chr14	-	1447	9	FSM	ENSG00000092036.19	ENST00000490506.5	1447	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	88.8874815426784	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-10	True	NA	-24	True	AATAAA	-20	NA	22957094	22946227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22955099_22955177_22956915
transcript_40636.known	chr14	-	1626	9	FSM	ENSG00000092036.19	ENST00000555986.5	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	98.2837092299634	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATTATCTCCTGAAT	4	True	NA	-66	True	NA	NA	NA	22957137	22946269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_40637.known	chr14	-	1454	9	FSM	ENSG00000092036.19	ENST00000555367.5	1454	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	75.7511344799535	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	-6	True	NA	-57	True	NA	NA	NA	22957126	22946260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_4064.known	chr1	+	3335	11	FSM	ENSG00000117013.17	ENST00000506017.1	3335	11	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	5.45985347788748	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGATTGTTCTTGGTTTT	1773	False	NA	8	True	ATTAAA	-13	NA	40818963	40840451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40818991_40819346_40819473_40819874_40819986_40820164_40820261_40822313_40822403_40824096_40824259_40831083_40831305_40833013_40833114_40834966_40835099_40837664_40837795_40838310
transcript_40643.known	chr14	-	2648	6	FSM	ENSG00000129474.16	ENST00000397388.7	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_5	25.3818833028599	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTGTATCATTTTTTT	5418	False	NA	-11	True	AATAAA	-17	NA	22977223	22971814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22973569_22974046_22974116_22974838_22974891_22974973_22975105_22976455_22976519_22976644
transcript_40646.nic	chr14	-	808	5	ISM	ENSG00000092036.19	ENST00000557591.5	582	7	-112	1097	-12	0	intron_retention	FALSE	canonical	3	150	junction_4	59.6337781798202	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTTGTCAAGCTTT	NA	False	NA	3	True	AATAAA	-34	NA	22957173	22951491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_40647.known	chr14	-	1474	9	FSM	ENSG00000092036.19	ENST00000342454.12	1474	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	84.2359038652759	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	12	True	NA	-32	True	AATAAA	-12	NA	22957129	22946235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_40648.known	chr14	-	1642	10	FSM	ENSG00000092036.19	ENST00000206474.11	1642	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_9	63.7194855558814	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-13	False	NA	-24	True	AATAAA	-20	NA	22957154	22946227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_40649.known	chr14	-	4168	8	FSM	ENSG00000129474.16	ENST00000262713.7	4168	8	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_5	23.2343869016137	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTTGTGTAACTTTACA	0	True	NA	-1	True	ATTAAA	-38	NA	22982551	22971176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22973569_22974046_22974116_22974838_22974891_22974973_22975105_22976455_22976519_22976644_22976713_22978343_22978446_22981260
transcript_4065.known	chr1	+	2947	20	FSM	ENSG00000171793.16	ENST00000649124.1	2947	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	159.92340618207	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAGTAAGGCAGAAC	28	True	NA	NA	False	NA	NA	NA	40979720	41012539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40980885_40981044_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_40650.known	chr14	-	1776	8	FSM	ENSG00000100802.15	ENST00000397377.5	1776	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	11.5864100548524	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAATAATGAGATGCTC	17	True	NA	37	True	GGGGCT	-2	NA	23010122	22987144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22998742_22999053_22999403_23010100
transcript_40652.known	chr14	-	1986	7	FSM	ENSG00000100802.15	ENST00000397382.8	1986	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	11.1716406832459	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGTGCAGTCTGAGAAA	NA	False	NA	53	True	GGGGCT	-18	NA	23010166	22987128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999157_23010016
transcript_40653.known	chr14	-	3360	7	FSM	ENSG00000100802.15	ENST00000299088.11	3360	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	10.1598337694188	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGTTCGACTTAGGATT	-4	True	NA	NA	False	AATAAA	-37	NA	23010143	22985893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
transcript_40661.known	chr14	-	1625	1	FSM	ENSG00000280129.1	ENST00000623843.1	1625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTGTCTCCTCTTTTT	-4	True	NA	NA	False	AATAAA	-19	NA	23007123	23005498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23005500_23007100
transcript_40662.known	chr14	+	1021	4	FSM	ENSG00000258457.5	ENST00000557615.5	1021	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGCTTTTATGCAA	NA	False	NA	NA	False	NA	NA	NA	22982697	22994151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22983082_22983506_22983594_22989748_22989957_22993809
transcript_4067.known	chr1	+	2840	19	FSM	ENSG00000171793.16	ENST00000650070.2	2840	19	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_11	25.1553813303743	1968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	3	True	NA	NA	False	AATAAA	-22	NA	40979695	41012565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_40670.known	chr14	-	796	3	FSM	ENSG00000100804.19	ENST00000334454.10	796	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	1731	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCATGGATCGGGGCT	8	True	NA	NA	False	NA	NA	NA	23034885	23026296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23033367_23033675_23034475
transcript_40674.known	chr14	-	900	3	FSM	ENSG00000100804.19	ENST00000425762.2	900	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	1717.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTTTCTTGGATG	1	True	NA	-15	True	NA	NA	NA	23035230	23025901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23033367_23033675_23035111
transcript_40676.known	chr14	-	729	2	FSM	ENSG00000100804.19	ENST00000460922.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-1	True	NA	-7	True	NA	NA	NA	23034894	23025857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23034683
transcript_40677.known	chr14	-	1044	3	FSM	ENSG00000100804.19	ENST00000361611.11	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	3333	junction_2	71.5	25438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCTGTGTTGCATCT	-7	True	NA	-5	True	NA	NA	NA	23034900	23025855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23033367_23033675_23034683
transcript_40678.known	chr14	-	444	3	FSM	ENSG00000100804.19	ENST00000555895.5	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1649	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTTGTTTGTTTGTTT	504	False	NA	-3	True	AATAAA	-16	NA	23034727	23016542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23016636_23033367_23033675_23034683
transcript_40679.known	chr14	-	1117	4	FSM	ENSG00000100804.19	ENST00000493471.2	1117	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	1449.53793404044	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	3	True	NA	-7	True	NA	NA	NA	23034890	23025857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23027744_23027830_23033367_23033675_23034683
transcript_40680.nic	chr14	-	803	2	ISM	ENSG00000139880.21	ENST00000485922.2	2006	5	2184	0	2184	0	3prime_fragment	FALSE	canonical	3	99	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCCTGCTTCTGTT	9588	False	NA	-5	True	AATAAA	-21	NA	23047955	23047066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_23047375_23047460
transcript_40684.known	chr14	-	2563	13	FSM	ENSG00000100813.15	ENST00000357481.6	2563	13	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_12	154.709315240622	1728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	9051	False	NA	-6	True	AATAAA	-17	NA	23071617	23058566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_40686.known	chr14	-	2738	12	FSM	ENSG00000100813.15	ENST00000397341.7	2738	12	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_11	111.571790622943	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTAGTTTTAAACTGT	6	True	NA	-19	True	AATAAA	-4	NA	23071565	23058579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124
transcript_40687.known	chr14	-	2445	12	FSM	ENSG00000100813.15	ENST00000338631.10	2445	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_11	133.049173784087	1728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	10	True	NA	-6	True	AATAAA	-17	NA	23071561	23058566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071426
transcript_40693.known	chr14	-	4815	18	FSM	ENSG00000100813.15	ENST00000457657.5	4815	18	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_15	162.162505532851	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	9529	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
transcript_40703.known	chr14	+	725	2	FSM	ENSG00000179933.6	ENST00000554203.1	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCAATCTAAGCAATCCA	-6	True	NA	NA	False	NA	NA	NA	23095524	23098271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23095620_23097641
transcript_40712.known	chr14	+	2914	2	FSM	ENSG00000179933.6	ENST00000319074.6	2914	2	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_1	0	4656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGACTCCATGGATTTGA	-26	True	NA	7	True	AATAAA	-15	NA	23095504	23100456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23095620_23097657
transcript_40713.known	chr14	-	1191	2	FSM	ENSG00000092067.6	ENST00000206513.6	1191	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGGACTGTTGGCTGTG	1	True	NA	NA	False	AATAAA	-18	NA	23119255	23117305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23117823_23118581
transcript_40717.known	chr14	-	4236	11	FSM	ENSG00000092068.21	ENST00000316902.12	4236	11	0	0	0	0	multi-exon	FALSE	canonical	3	2430	junction_2	118.76619889514	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	0	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
transcript_4072.known	chr1	+	2855	18	FSM	ENSG00000171793.16	ENST00000498694.2	2855	18	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_11	25.5088016562463	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	48	False	NA	NA	False	AATAAA	-3	NA	40979740	41012546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_40720.known	chr14	-	1752	9	FSM	ENSG00000092068.21	ENST00000453702.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	879.768213437494	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTCCCCATCATACC	-7	True	NA	NA	False	NA	NA	NA	23154401	23126667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23154258
transcript_40721.known	chr14	-	1499	8	FSM	ENSG00000092068.21	ENST00000528860.5	1499	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	1167.21884697545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCAAGGGGTCAGCTG	1	True	NA	NA	False	NA	NA	NA	23154393	23126758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23143078_23143205_23154258
transcript_40725.known	chr14	-	658	3	FSM	ENSG00000092068.21	ENST00000525062.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1416	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGTGACGGGCTTCAT	10	False	NA	NA	False	NA	NA	NA	23183650	23166457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23166541_23182763_23183039_23183350
transcript_4073.known	chr1	+	2648	18	FSM	ENSG00000171793.16	ENST00000648914.1	2648	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	121.616505435996	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATAGCTACGTGGCAC	12	True	NA	NA	False	NA	NA	NA	40979704	41012479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_40730.known	chr14	+	2145	10	FSM	ENSG00000258643.6	ENST00000678502.1	2145	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	1552.26499583156	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTGTAAGGATTATTTA	-23	True	NA	29	True	AATAAA	-33	NA	23306832	23326175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23319734_23319831_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_40733.known	chr14	+	1241	9	FSM	ENSG00000258643.6	ENST00000553781.5	1241	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1513.51013789139	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGACCTTGATGGA	-21	True	NA	83	True	ATTAAA	-18	NA	23306834	23325369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_4074.known	chr1	+	2019	17	FSM	ENSG00000171793.16	ENST00000480420.6	2019	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	125.313840391834	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATTTTATTATGCGGA	-5	True	NA	NA	False	TTTAAA	-15	NA	40979687	41011754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_40743.known	chr14	+	1220	6	FSM	ENSG00000100836.11	ENST00000556821.5	1220	6	0	0	0	0	multi-exon	FALSE	canonical	3	2743	junction_5	211.823133769662	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAGGAGAGAGAGGAAA	56	False	NA	12	True	AAAAAG	-7	NA	23321542	23325298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_40751.known	chr14	+	778	5	FSM	ENSG00000100836.11	ENST00000557702.5	778	5	0	0	0	0	multi-exon	FALSE	canonical	3	3096	junction_1	106.491783720623	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCCTCCCCGTGGTCTTC	-3	True	NA	NA	False	NA	NA	NA	23322021	23324378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137
transcript_40757.known	chr14	+	3526	4	FSM	ENSG00000129473.11	ENST00000250405.10	3526	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5.79271573232759	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAACAGGGTTTGTGA	-23	True	NA	17	True	AATAAA	-25	NA	23306832	23311751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23308815
transcript_40759.known	chr14	+	3539	4	FSM	ENSG00000129473.11	ENST00000679000.1	3539	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	11.2644968324772	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTTTAATGAGAAGGAC	-5	True	NA	1	True	AATAAA	-9	NA	23306850	23311735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23306942_23307191_23307280_23307759_23308200_23308815
transcript_40762.known	chr14	-	4986	2	FSM	ENSG00000215271.9	ENST00000357460.7	4986	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGATGGAGTCTCGCTC	-18	True	NA	NA	False	NA	NA	NA	23286132	23272421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23277188_23285912
transcript_40763.nic	chr14	-	731	2	ISM	ENSG00000215271.9	ENST00000558278.1	563	3	-14	109	1	-109	5prime_fragment	FALSE	canonical	3	31	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGATGTAGTGGTGAG	-17	True	NA	-7	True	ATTAAA	-20	NA	23286131	23285099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_23285612_23285912
transcript_40764.known	chr14	-	1830	3	FSM	ENSG00000215271.9	ENST00000673724.1	1830	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGATTCCAGTGCATCC	7520	False	NA	NA	False	AGTAAA	-15	NA	23286070	23275182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23276349_23276681_23277188_23285912
transcript_40766.known	chr14	-	2653	6	FSM	ENSG00000100842.13	ENST00000216733.8	2653	6	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_4	27.8897830755279	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCGACATTTGCTG	-5	True	NA	-12	True	AATAAA	-14	NA	23365172	23356405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23357661_23358875_23358966_23359316_23360040_23360140_23360282_23360554_23360834_23365007
transcript_40768.known	chr14	+	718	6	FSM	ENSG00000166091.21	ENST00000649278.1	718	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.85472369909914	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGCTCTGGCCAGAGG	1	True	NA	NA	False	NA	NA	NA	23376772	23379669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23376808_23377221_23377378_23378348_23378502_23379030_23379124_23379298_23379384_23379473
transcript_40771.known	chr14	+	1200	5	FSM	ENSG00000166091.21	ENST00000359320.7	1200	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.58113883008419	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGTCTCTTTCTTCC	15	False	NA	NA	False	ATTAAA	-15	NA	23376807	23379772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23377378_23378348_23378502_23379030_23379124_23379298_23379384_23379473
transcript_40772.known	chr14	+	378	4	FSM	ENSG00000166091.21	ENST00000382809.2	378	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGGGCTACCTGGCTCC	111	False	NA	NA	False	NA	NA	NA	23377251	23379487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23377378_23378348_23378502_23379298_23379384_23379473
transcript_40774.known	chr14	+	725	3	FSM	ENSG00000166091.21	ENST00000342473.8	725	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGTCTCTTTCTTCC	7	True	NA	NA	False	ATTAAA	-15	NA	23377036	23379772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23377378_23379298_23379384_23379473
transcript_40775.known	chr14	+	1931	4	FSM	ENSG00000166091.21	ENST00000553750.1	1931	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGAGTCTCTTTCTTC	17	True	NA	NA	False	ATTAAA	-14	NA	23377046	23379771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23378502_23379030_23379124_23379298_23379384_23379473
transcript_40779.known	chr14	+	1108	11	FSM	ENSG00000129460.16	ENST00000408901.8	1108	11	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	142.884043895741	5828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	4	True	NA	13	True	AATAAA	-19	NA	23469702	23478173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
transcript_40785.known	chr14	+	2204	10	FSM	ENSG00000129460.16	ENST00000397154.7	2204	10	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	150.612904206712	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCCAGCAGACAAGCAG	4	True	NA	NA	False	TATAAA	-28	NA	23469702	23478823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502
transcript_40793.known	chr14	+	2763	7	FSM	ENSG00000129460.16	ENST00000553439.5	2763	7	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	177.689257475578	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8	True	NA	NA	False	AATAAA	-27	NA	23469706	23478804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23476153_23476238_23476408_23477199_23477357_23477502
transcript_40795.known	chr14	+	803	3	FSM	ENSG00000129460.16	ENST00000556378.5	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	209	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCGGGACCAACCTGG	-10	True	NA	NA	False	NA	NA	NA	23469688	23471609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041_23470102_23470905
transcript_40797.known	chr14	+	270	2	FSM	ENSG00000129460.16	ENST00000557097.5	270	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAACTCCAAAAAGAAAT	0	True	NA	NA	False	NA	NA	NA	23469698	23470282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041
transcript_4080.known	chr1	+	4006	19	FSM	ENSG00000171793.16	ENST00000648020.1	4006	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	120.562570200429	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAAGAGACATGCTTTG	25	True	NA	NA	False	AATAAA	-11	NA	40979717	41012554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_40999829_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_40800.known	chr14	+	725	3	FSM	ENSG00000129460.16	ENST00000556699.1	725	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	445.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATGGTGAGTTTTCTTG	7514	False	NA	40	True	TTTAAA	-19	NA	23477212	23509862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23477357_23477502_23477561_23509339
transcript_40806.nic	chr14	-	2615	22	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_21	103.507139324572	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	10013	False	NA	-16	True	AATAAA	-33	NA	23567520	23559566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567450
transcript_40808.known	chr14	-	2598	22	FSM	ENSG00000213983.12	ENST00000397120.8	2598	22	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_21	78.9978902671879	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-16	True	NA	-16	True	AATAAA	-33	NA	23567791	23559566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_4081.known	chr1	+	1607	13	FSM	ENSG00000171793.16	ENST00000463285.6	1607	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	143.659391733828	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAGCAGTTTGACTTT	5	True	NA	NA	False	AATAAA	-15	NA	40979757	41004250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41003980
transcript_40819.nnic	chr14	-	2544	21	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_11	113.692337032889	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	9682	False	NA	-16	True	AATAAA	-33	NA	23567851	23559566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_4085.known	chr1	-	363	2	FSM	ENSG00000010803.16	ENST00000488592.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGAATTTTCCAGATTG	156	False	NA	NA	False	NA	NA	NA	41242154	41185983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_41186251_41242058
transcript_40850.nic	chr14	-	1715	15	NIC	ENSG00000213983.12	novel	891	8	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_1	88.6112813566843	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTATTATTACCTTGAA	9682	False	NA	-18	True	ATTAAA	-17	NA	23567851	23563095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_23563283_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_4086.known	chr1	-	991	2	FSM	ENSG00000286640.2	ENST00000670055.1	991	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAGATTTTTATGCTACA	-3	True	NA	NA	False	NA	NA	NA	41305943	41303019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_41303909_41305841
transcript_40865.known	chr14	+	569	3	FSM	ENSG00000259431.6	ENST00000554970.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTGCCTCTCCCCTC	-37	True	NA	NA	False	NA	NA	NA	23556270	23558898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23556344_23556742_23557035_23558694
transcript_40866.known	chr14	+	535	3	FSM	ENSG00000259431.6	ENST00000556015.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGGAACTCTGGGTCT	-37	True	NA	NA	False	NA	NA	NA	23556270	23558859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23556344_23556742_23557040_23558694
transcript_40867.known	chr14	+	1779	3	FSM	ENSG00000259431.6	ENST00000404535.3	1779	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	21.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTCAGGCTTTATT	3	True	NA	17	True	AATATA	-17	NA	23556006	23559574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23556344_23556742_23557305_23558694
transcript_40869.known	chr14	-	9296	10	FSM	ENSG00000136367.15	ENST00000419474.5	9296	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	9.57362632379467	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGTGTTTTTTTTCCTA	-11	True	NA	1	True	AATACA	-33	NA	23551765	23520856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23522942_23523202_23526680_23526846_23526974_23527603_23527805_23529709_23529769_23530119_23530195_23531480_23531722_23532566_23533085_23533284_23535375_23551342
transcript_40870.known	chr14	+	571	2	FSM	ENSG00000259431.6	ENST00000555446.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTCAGTGTCCCTTC	-16	True	NA	NA	False	NA	NA	NA	23555987	23558909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23556344_23558694
transcript_40871.known	chr14	+	2611	2	FSM	ENSG00000259431.6	ENST00000288014.7	2611	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGATGAAATGGGTGACA	-37	True	NA	NA	False	NA	NA	NA	23556270	23560271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23557305_23558694
transcript_40872.known	chr14	+	339	2	FSM	ENSG00000259431.6	ENST00000556545.1	339	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCCCTGGCTGCTTCCTC	589	False	NA	NA	False	NA	NA	NA	23556998	23558997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23557035_23558694
transcript_40873.known	chr14	+	3243	4	FSM	ENSG00000258727.1	ENST00000555968.1	3243	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTTTGTATTTTTTT	2148	False	NA	NA	False	AATATA	-12	NA	23561096	23568073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23561874_23564726_23564841_23565455_23567423_23567688
transcript_40875.known	chr14	-	3298	21	FSM	ENSG00000213983.12	ENST00000308724.9	3298	21	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_6	73.503333257751	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	9928	False	NA	-14	True	AATAAA	-35	NA	23568070	23559564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110
transcript_40876.known	chr14	+	1595	2	FSM	ENSG00000259431.6	ENST00000554789.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTTCAAATATACCCAA	-14	True	NA	-14	True	NA	NA	NA	23556293	23559543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23557040_23558694
transcript_4088.known	chr1	-	597	3	FSM	ENSG00000197273.4	ENST00000357001.3	597	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGTGTTGCCTTCCTT	0	True	NA	NA	False	AATAAA	-16	NA	42164745	42162689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42162971_42163402_42163611_42164637
transcript_40882.known	chr14	+	3157	9	FSM	ENSG00000100867.15	ENST00000556701.5	3157	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.02715934252836	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTGGAAGCATCTGTCA	3	True	NA	10	True	AATAAA	-16	NA	23636366	23645637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23636773_23638826_23639005_23639178_23639357_23639793_23639896_23641665_23643220_23644110_23644163_23644408_23644544_23644826_23644883_23645141
transcript_40884.known	chr14	+	1678	9	FSM	ENSG00000100867.15	ENST00000344777.11	1678	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.02715934252836	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGCATCTGTCAAG	9	False	NA	12	True	AATAAA	-18	NA	23636372	23645639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23636773_23638826_23639005_23639178_23639357_23639793_23639896_23643151_23643220_23644110_23644163_23644408_23644555_23644826_23644883_23645141
transcript_40889.known	chr14	-	2830	4	FSM	ENSG00000215256.5	ENST00000671411.1	2830	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.18241233033047	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAATTTATTTAGTTT	-29	True	NA	-32	True	AATGAA	-24	NA	23954186	23938761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953308_23953420_23953773_23954034_23954124
transcript_4089.known	chr1	-	1326	8	FSM	ENSG00000198815.9	ENST00000445886.5	1326	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	43.2920787400265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCCTCTCCACATCAACA	-6	True	NA	NA	False	NA	NA	NA	42335221	42191405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42191720_42194889_42195065_42199101_42199231_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
transcript_40890.nnic	chr14	-	600	4	NNC	ENSG00000215256.5	novel	1142	2	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.79869268479038	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTTATGAACTGTAAGC	888	False	NA	NA	False	AATAAA	-19	NA	23954207	23952985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_23953132_23953308_23953420_23953773_23954034_23954124
transcript_40894.known	chr14	-	2903	3	FSM	ENSG00000215256.5	ENST00000671346.1	2903	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAATCTTTATGGAAT	-26	True	NA	-47	True	AATGAA	-9	NA	23954183	23938776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953308_23953420_23953773
transcript_40895.known	chr14	-	2759	3	FSM	ENSG00000215256.5	ENST00000555045.2	2759	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	13.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATGGCTTCTGAGTTT	891	False	NA	-10	True	AATAAA	-15	NA	23954204	23938739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953773_23954034_23954124
transcript_40898.known	chr14	-	1492	2	FSM	ENSG00000215256.5	ENST00000553454.1	1492	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCACAAGCCTCACCAAAG	973	False	NA	NA	False	AATAAA	-8	NA	23954122	23940215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953573
transcript_40899.known	chr14	-	585	2	FSM	ENSG00000215256.5	ENST00000399886.3	585	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCCAGGTGTGGTGGC	894	False	NA	NA	False	ATTAAA	-20	NA	23954201	23940650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23954124
transcript_409.known	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9244.75309212609	4873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
transcript_40901.known	chr14	-	2852	2	FSM	ENSG00000215256.5	ENST00000556379.2	2859	2	7	0	-4	0	multi-exon	FALSE	canonical	3	44	junction_1	0	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGAGTTTTGTGTCATG	898	False	NA	-1	True	AATAAA	-24	NA	23954197	23938730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953773
transcript_40903.known	chr14	-	509	2	FSM	ENSG00000215256.5	ENST00000554036.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCTTTATGAACTGT	1243	False	NA	NA	False	AATAAA	-15	NA	23953852	23952989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23953420_23953773
transcript_40904.known	chr14	-	2763	2	FSM	ENSG00000215256.5	ENST00000660207.1	2763	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTATGGCTTCTGAGTT	3	True	NA	-11	True	AATAAA	-14	NA	23955092	23938740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23954747
transcript_40908.known	chr14	+	1264	8	FSM	ENSG00000157326.19	ENST00000313250.10	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	64.378028955886	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	16	True	NA	NA	False	AATAAA	-31	NA	23953769	23969279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_40914.known	chr14	+	1143	7	FSM	ENSG00000157326.19	ENST00000558581.5	1143	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	107.595952009771	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	35	False	NA	NA	False	AATAAA	-31	NA	23953788	23969279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_40919.known	chr14	+	727	5	FSM	ENSG00000157326.19	ENST00000397075.7	727	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	89.0126395519198	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCTGCCGTCAAGGT	25	False	NA	NA	False	NA	NA	NA	23953778	23969009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23967210_23967267_23968756
transcript_4092.nic	chr1	-	437	3	ISM	ENSG00000198815.9	ENST00000445886.5	1326	8	38	87016	32	-13491	5prime_fragment	FALSE	canonical	3	175	junction_1	5.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTTAAGTGAAATTTAT	-1	True	NA	NA	False	AAAAAG	-5	NA	42335183	42278421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_42278673_42311049_42311111_42335058
transcript_40920.nnic	chr14	+	1036	5	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	727	5	NA	NA	1	0	multi-exon	FALSE	canonical	3	115	junction_3	93.5053474406678	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	-19	True	NA	NA	False	AATAAA	-26	NA	23953734	24006403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_23959901_23960004_24004336_24004393_24005885
transcript_40921.nnic	chr14	+	858	4	NNC	ENSG00000157326.19	novel	1340	4	NA	NA	-2	-3153	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	140.376477928304	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTCAATGGTTCATT	-22	True	NA	NA	False	TATAAA	-21	NA	23953731	23964970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_23953917_23955034_23955213_23959901_23960004_23964577
transcript_40923.known	chr14	+	785	4	FSM	ENSG00000157326.19	ENST00000397074.7	785	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	147.02909764926	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAGAGAAGGAACCTGG	32	False	NA	NA	False	NA	NA	NA	23953785	23969176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23967210_23967267_23968756
transcript_40924.nic	chr14	+	721	2	ISM	ENSG00000157326.19	ENST00000543741.6	1340	4	-68	12583	-32	-12583	5prime_fragment	FALSE	canonical	3	297	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTATAGAGTCAAGTC	NA	False	NA	NA	False	AATAAA	-15	NA	23953701	23955540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_23953917_23955034
transcript_40927.nnic	chr14	+	1293	8	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	1264	8	NA	NA	1	0	multi-exon	FALSE	canonical	3	57	junction_5	109.589959319609	383	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	-19	True	NA	NA	False	AATAAA	-26	NA	23953734	24006403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_23959901_23960004_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
transcript_4093.nic	chr1	-	611	3	ISM	ENSG00000198815.9	ENST00000372573.5	5309	13	-47	101883	-47	-13491	5prime_fragment	FALSE	canonical	3	5	junction_2	85	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTTAAGTGAAATTTAT	NA	False	NA	NA	False	AAAAAG	-5	NA	42335924	42278421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_42278673_42311049_42311111_42335625
transcript_40930.known	chr14	+	1258	8	FSM	ENSG00000187630.18	ENST00000335125.11	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	110.578995680528	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	4	True	NA	NA	False	AATAAA	-26	NA	23988928	24006403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
transcript_40943.nnic	chr14	+	1036	5	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	727	5	NA	NA	1	0	multi-exon	FALSE	canonical	3	115	junction_3	93.5053474406678	533	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	-19	True	NA	NA	False	AATAAA	-26	NA	23953734	24006403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_23959901_23960004_24004336_24004393_24005885
transcript_40944.nnic	chr14	+	1036	5	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	727	5	NA	NA	1	0	multi-exon	FALSE	canonical	3	56	junction_3	120.804335601004	243	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	-19	True	NA	NA	False	AATAAA	-26	NA	23953734	24006403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_23995031_23995134_24004336_24004393_24005885
transcript_40949.known	chr14	+	1117	5	FSM	ENSG00000187630.18	ENST00000397071.5	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	142.347286591631	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	-7	True	NA	NA	False	AATAAA	-31	NA	23988817	24006408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24004336_24004393_24005885
transcript_40952.nnic	chr14	+	934	4	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	1340	4	NA	NA	1	0	multi-exon	FALSE	canonical	2	15	junction_2	150.612822237093	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	-19	True	NA	NA	False	AATAAA	-26	NA	23953734	24006403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_24004336_24004393_24005885
transcript_40961.nic	chr14	+	712	2	ISM	ENSG00000187630.18	ENST00000558753.5	556	4	-15	13702	-15	-10387	5prime_fragment	FALSE	canonical	3	26	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATAGAGTCAAGTCCCT	48	False	NA	NA	False	AATAAA	-18	NA	23988872	23990690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_23989076_23990181
transcript_40962.known	chr14	+	464	2	FSM	ENSG00000225766.11	ENST00000558682.1	464	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATACCCAACCAGCCCACC	10	False	NA	NA	False	ACTAAA	-18	NA	24036476	24038054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24036629_24037742
transcript_40963.known	chr14	+	4589	40	FSM	ENSG00000186648.15	ENST00000342740.6	4589	40	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_5	3.51833742339362	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGAGTCTCTGCT	-17	True	NA	10	True	AATAAA	-15	NA	24052008	24069729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24052194_24053708_24053804_24054087_24054139_24054241_24054302_24054395_24054512_24054710_24054809_24055065_24055137_24055236_24055311_24055542_24055619_24055700_24055790_24056298_24056394_24056621_24056709_24056914_24057025_24057166_24057245_24057802_24057880_24057959_24058065_24058154_24058225_24058679_24058762_24058889_24058987_24059134_24059190_24059269_24059443_24059663_24059733_24059969_24060064_24060156_24060256_24060627_24060757_24060926_24061041_24061496_24061673_24062479_24062568_24062708_24062847_24063119_24063184_24063324_24063534_24064245_24064347_24064957_24065274_24065621_24065751_24066397_24066465_24066566_24066657_24068583_24068703_24068785_24068967_24069136_24069248_24069378
transcript_4097.known	chr1	+	10577	5	FSM	ENSG00000177181.15	ENST00000431473.4	10577	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	11.9660979437743	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTTTGCAATTTACT	-10	True	NA	NA	False	ATTAAA	-19	NA	42380791	42424232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42381098_42399403_42399635_42404510_42404598_42409983_42410188_42414483
transcript_40973.known	chr14	+	2570	15	FSM	ENSG00000100897.18	ENST00000326009.9	2570	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	117.126152990208	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	49	True	NA	16	True	AATAAA	-16	NA	24115274	24124029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24115294_24115381_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_40976.known	chr14	+	4304	15	FSM	ENSG00000100897.18	ENST00000446197.8	4304	15	0	0	0	0	multi-exon	TRUE	canonical	3	198	junction_1	71.3256758875535	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTTCTGTGTTCTC	-28	True	NA	13	True	AATAAA	-24	NA	24114776	24125242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24115294_24115381_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_4099.known	chr1	+	2627	10	FSM	ENSG00000186409.18	ENST00000671281.1	2627	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.70801280154532	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTTTCTTTATAAATT	1	True	NA	NA	False	NA	NA	NA	42463311	42590268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42463899_42480460_42480567_42482662_42482817_42490157_42490230_42497097_42497214_42498817_42498917_42566295_42566476_42577019_42577230_42581359_42581515_42589320
transcript_40996.known	chr14	+	2179	10	FSM	ENSG00000100889.12	ENST00000216780.9	2179	10	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	34.1481883184467	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	-1	True	NA	13	True	NA	NA	NA	24094310	24104125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
transcript_40997.nic	chr14	+	1875	10	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_9	129.265446100478	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	117	False	NA	13	True	NA	NA	NA	24094282	24104125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103841
transcript_41003.nnic	chr14	+	2003	9	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	48	junction_6	130.713427007328	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	102	False	NA	13	True	NA	NA	NA	24094267	24104125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24102752_24102891_24103159_24103256_24103509
transcript_41010.known	chr14	+	1830	7	FSM	ENSG00000100889.12	ENST00000396973.8	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	38	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTGGATTTTTTTTT	-7	True	NA	5	True	AATAAA	-1	NA	24094158	24100562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994
transcript_4102.known	chr1	+	685	2	FSM	ENSG00000186409.18	ENST00000468651.2	685	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGTGTAGACCTTTTTT	6721	False	NA	37	True	ATTAAA	-39	NA	42463268	42473417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42463658_42473121
transcript_4103.known	chr1	-	1530	8	FSM	ENSG00000066185.13	ENST00000372565.8	1530	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.16057691494799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCTATTCTTAATTCC	6	True	NA	NA	False	AATAAA	-17	NA	42456022	42430328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42430859_42433142_42433289_42435273_42435386_42436420_42436544_42439855_42440026_42448466_42448639_42449917_42450060_42455887
transcript_41032.known	chr14	-	872	5	FSM	ENSG00000100908.14	ENST00000560403.5	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	165.790530489531	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	5712	False	NA	-13	True	AATAAA	-15	NA	24141570	24138964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141347
transcript_41040.known	chr14	-	565	1	FSM	ENSG00000100908.14	ENST00000558045.2	565	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATAACTATATTTATT	7759	False	NA	-7	True	AATAAA	-21	NA	24139523	24138958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24139000_24139500
transcript_41041.known	chr14	+	1033	11	FSM	ENSG00000092010.15	ENST00000559123.5	1033	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	847.841264624458	8756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCAGCCCAAGTCTCT	0	True	NA	29	True	AATAAA	-16	NA	24136162	24138959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24136342_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138561_24138735
transcript_41042.known	chr14	+	1136	10	FSM	ENSG00000092010.15	ENST00000382708.7	1136	10	0	0	0	0	multi-exon	FALSE	canonical	2	536	junction_4	108.683479726369	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAAGTCTCTTTATT	-9	True	NA	34	True	AATAAA	-21	NA	24136199	24138964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473
transcript_41043.known	chr14	+	945	11	FSM	ENSG00000092010.15	ENST00000561435.5	945	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	269.472243468599	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGTCTCTTTATTGGA	18	True	NA	37	True	AATAAA	-24	NA	24136226	24138967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138569_24138735
transcript_41044.known	chr14	-	953	5	FSM	ENSG00000100908.14	ENST00000419198.6	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_3	31.1849322590254	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	19	True	NA	-13	True	AATAAA	-15	NA	24141585	24138964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106
transcript_41045.known	chr14	-	838	6	FSM	ENSG00000100908.14	ENST00000216799.9	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	75.352504935138	1899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	13	True	NA	-13	True	AATAAA	-15	NA	24141591	24138964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106_24141317_24141437
transcript_41053.known	chr14	-	755	10	FSM	ENSG00000100911.16	ENST00000560410.5	755	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	523.263430103758	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	5	True	NA	-8	True	AATAAA	-21	NA	24146605	24143364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146533
transcript_41059.known	chr14	+	1626	9	FSM	ENSG00000213928.9	ENST00000396864.8	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	16.9737849344217	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	-25	True	NA	11	True	AATAAA	-19	NA	24161264	24166565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
transcript_4106.known	chr1	-	1503	7	FSM	ENSG00000066185.13	ENST00000611861.4	1503	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11803398874989	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCCAACGATGCATG	7	True	NA	NA	False	ATTAAA	-26	NA	42456253	42430414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42430859_42433142_42433289_42435273_42435386_42436420_42436544_42439855_42440026_42449917_42450060_42455887
transcript_41066.known	chr14	-	793	11	FSM	ENSG00000100911.16	ENST00000216802.10	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1345	junction_6	184.464088646002	8616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	0	True	NA	-8	True	AATAAA	-21	NA	24146610	24143364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_41067.known	chr14	-	1502	11	FSM	ENSG00000100911.16	ENST00000558273.5	1502	11	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_9	535.674574718644	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGACTAGAAGGAAAATAAA	0	True	NA	-48	True	AAGAAA	-22	NA	24147235	24143404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145897_24146207_24146241_24146533
transcript_41068.known	chr14	-	496	2	FSM	ENSG00000100911.16	ENST00000559005.2	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	1789	junction_1	0	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGCGTGTGTCATTC	3330	False	NA	-5	True	AATAAA	-24	NA	24143952	24143361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584
transcript_41069.known	chr14	-	706	10	FSM	ENSG00000100911.16	ENST00000471700.6	706	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	579.136863075422	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTCTGGCGTGTGTC	703	False	NA	-9	True	AATAAA	-20	NA	24146579	24143365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_41070.known	chr14	-	3498	30	FSM	ENSG00000196497.17	ENST00000354464.11	3498	30	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_19	42.9782457484015	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-2	True	NA	-14	True	AATAAA	-28	NA	24188816	24180218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_41072.known	chr14	+	2405	20	FSM	ENSG00000100918.14	ENST00000620473.4	2405	20	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	27.670999449357	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCATGACTCATTTGT	5457	False	NA	131	True	AAAACA	-20	NA	24171852	24180257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24172366_24172466_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_4109.known	chr1	+	966	3	FSM	ENSG00000127125.9	ENST00000372562.1	966	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	302.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGATATGATGTCA	14	False	NA	NA	False	NA	NA	NA	42456116	42460081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42456500_42457246_42457351_42459602
transcript_41091.known	chr14	-	2200	6	FSM	ENSG00000100926.15	ENST00000261789.9	2200	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	53.4355686785497	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	6	True	NA	-9	True	AATAAA	-16	NA	24195441	24189148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_41098.known	chr14	-	847	6	FSM	ENSG00000254505.11	ENST00000542700.6	847	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	330.00448481801	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCAGCCCTGGCTCAA	2975	False	NA	-159	True	AAAAAG	-10	NA	24213085	24209733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211410_24211593_24211679_24211830_24213023
transcript_41110.known	chr14	-	2055	5	FSM	ENSG00000100926.15	ENST00000396854.8	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	57.8338136387356	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAAGATCCCTGCCCTC	16	True	NA	-24	True	AATAAA	-12	NA	24195618	24190041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_4112.known	chr1	+	984	3	FSM	ENSG00000127125.9	ENST00000372556.3	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	236.5	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGTTTTGTTTGAAA	13	True	NA	40	True	AATAAA	-33	NA	42456560	42460414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42456629_42457246_42457351_42459602
transcript_41122.known	chr14	-	651	5	FSM	ENSG00000129559.13	ENST00000531430.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	2163.95591163499	2937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAATCTTTCTTCTG	10016	False	NA	-26	True	AATAAA	-13	NA	24232325	24216865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651_24231738_24232249
transcript_41134.known	chr14	-	578	4	FSM	ENSG00000213920.9	ENST00000533536.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.3702308018996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGGCCTAAACTGAA	63	False	NA	-104	True	NA	NA	NA	24215997	24214037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214491_24214600_24215551_24215798_24215887
transcript_41147.known	chr14	-	1065	3	FSM	ENSG00000100926.15	ENST00000530468.5	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	158.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTGCTTCGGAATGAC	50	True	NA	46	True	NA	NA	NA	24195584	24192842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24193270_24194674_24195037_24195308
transcript_41148.known	chr14	-	904	3	FSM	ENSG00000100926.15	ENST00000528010.1	904	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	162.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGGAGCGTCGGAG	47	True	NA	-96	True	NA	NA	NA	24195587	24192984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24193270_24194674_24195052_24195345
transcript_41149.known	chr14	-	882	3	FSM	ENSG00000100926.15	ENST00000525592.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	163	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTGTGTTTTTACTG	-53	True	NA	1	True	NA	NA	NA	24195687	24192887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24193270_24194674_24195037_24195549
transcript_41150.known	chr14	-	721	3	FSM	ENSG00000100926.15	ENST00000530563.1	721	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	167.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGTCTTCCGCTTCCCCC	300	False	NA	-23	True	NA	NA	NA	24195334	24192730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24193270_24194674_24194831_24195308
transcript_41167.known	chr14	-	2300	3	FSM	ENSG00000129559.13	ENST00000533242.1	2300	3	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	21.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATGTTATCTCATTCA	0	True	NA	NA	False	ATTAAA	-18	NA	24232355	24226604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24228713_24231651_24231738_24232249
transcript_41170.known	chr14	-	286	2	FSM	ENSG00000129559.13	ENST00000526430.1	286	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTCTACTGGTGGG	10010	False	NA	NA	False	NA	NA	NA	24232331	24217019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24217224_24232249
transcript_41173.known	chr14	-	1200	1	FSM	ENSG00000278784.1	ENST00000619226.1	1200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	4492	False	NA	NA	False	ATTAAA	-20	NA	24202811	24201611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24201600_24202800
transcript_41174.known	chr14	+	2276	19	FSM	ENSG00000100918.14	ENST00000611366.5	2276	19	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_12	24.8534594059749	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	13	True	NA	128	True	AAAACA	-17	NA	24172079	24180254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_41175.known	chr14	-	616	4	FSM	ENSG00000129559.13	ENST00000250495.10	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	4058	junction_3	160.800773906374	39627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-12	True	NA	-17	True	AATAAA	-22	NA	24232367	24216856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24232249
transcript_41176.known	chr14	-	2108	10	FSM	ENSG00000260669.2	ENST00000565988.1	2108	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_6	248.409359478549	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGTTCCCAATAAAACTG	0	True	NA	-71	True	NA	NA	NA	24215974	24209645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211830_24213408_24214152_24214309_24214396_24214491_24214600_24215551_24215798_24215918
transcript_41177.known	chr14	-	723	6	FSM	ENSG00000213920.9	ENST00000288087.12	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	19.8957281847134	1972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-6	True	NA	-9	True	ATTAAA	-31	NA	24216066	24213942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
transcript_41178.known	chr14	-	889	4	FSM	ENSG00000213920.9	ENST00000530222.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	21.2289111041209	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	23	False	NA	-9	True	ATTAAA	-31	NA	24216037	24213942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551
transcript_41179.known	chr14	-	582	5	FSM	ENSG00000213920.9	ENST00000396833.2	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	73.3122602297869	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-5	True	NA	-9	True	ATTAAA	-31	NA	24216065	24213942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214545_24214600_24215551_24215663_24215736_24215798_24215918
transcript_41180.known	chr14	-	758	8	FSM	ENSG00000255526.6	ENST00000605847.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2052.6371688486	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGATTTTACCCACAGT	19	True	NA	-21	True	ATTAAA	-19	NA	24232336	24213954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24217185_24217224_24218132_24218216_24218383_24218432_24232249
transcript_41181.known	chr14	-	527	4	FSM	ENSG00000213920.9	ENST00000525696.5	527	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	82.9712132141155	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTTACCCACAGTG	422	False	NA	-20	True	ATTAAA	-20	NA	24215638	24213953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214261_24214396_24214491_24214600_24215551
transcript_41182.known	chr14	-	501	3	FSM	ENSG00000213920.9	ENST00000531553.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	94.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTACCCACAGTGTG	262	False	NA	-18	True	ATTAAA	-22	NA	24215798	24213951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214545_24214600_24215551
transcript_41183.known	chr14	-	626	4	FSM	ENSG00000129559.13	ENST00000396828.8	626	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	1946.36230497362	2458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	9997	False	NA	-17	True	AATAAA	-22	NA	24232303	24216856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24217224_24218058_24218216_24218383_24218432_24232249
transcript_41184.known	chr14	-	578	4	FSM	ENSG00000213920.9	ENST00000532742.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	20.2868320729373	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCAGCAAACTGGGTACTG	-10	True	NA	NA	False	NA	NA	NA	24216070	24214323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214396_24214491_24214600_24215551_24215798_24215918
transcript_4119.known	chr1	+	2269	3	FSM	ENSG00000127125.9	ENST00000372561.4	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	56.5	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGACTGAAATACTTC	-5	True	NA	11	True	AATAAA	-26	NA	42456542	42461236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42457074_42457246_42457351_42459602
transcript_41195.known	chr14	+	1562	10	FSM	ENSG00000100938.19	ENST00000559910.5	1562	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	111.368701412565	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACCTCAATAAAGAGA	-3	True	NA	-5	True	AAAAAG	-22	NA	24232635	24239204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41198.known	chr14	+	1893	10	FSM	ENSG00000100938.19	ENST00000559836.5	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	81.0159258844431	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-40	True	NA	33	True	AATAAA	-23	NA	24232441	24239242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_4120.known	chr1	+	1617	2	FSM	ENSG00000127125.9	ENST00000472013.1	1617	2	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTTGTTTTGTTTGA	-4	True	NA	38	True	AATAAA	-31	NA	42456543	42460412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42457351_42459602
transcript_41200.known	chr14	+	1972	10	FSM	ENSG00000100938.19	ENST00000355299.8	1972	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	89.2101140255097	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	NA	False	NA	33	True	AATAAA	-23	NA	24232421	24239242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232848_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41207.known	chr14	+	1595	10	FSM	ENSG00000100938.19	ENST00000399440.7	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	68.4965530357388	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-4	True	NA	33	True	AATAAA	-23	NA	24232928	24239242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_4121.known	chr1	+	641	3	FSM	ENSG00000127125.9	ENST00000471420.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTATCACTGTATA	253	False	NA	5	True	ATTAAA	-20	NA	42456800	42473385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42457074_42457246_42457351_42473121
transcript_41220.nic	chr14	+	1498	9	NIC	ENSG00000100938.19	novel	1595	10	NA	NA	-27	0	intron_retention	FALSE	canonical	3	11	junction_8	113.213225265426	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	191	False	NA	33	True	AATAAA	-23	NA	24232865	24239242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238588
transcript_41223.known	chr14	+	1484	9	FSM	ENSG00000100938.19	ENST00000456667.7	1484	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	107.792335070728	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAAGAGATGCTGGGG	15	False	NA	25	True	AATAAA	-15	NA	24232947	24239234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41235.known	chr14	+	1864	9	FSM	ENSG00000100938.19	ENST00000420554.6	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	39.4620070447513	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-5	True	NA	33	True	AATAAA	-23	NA	24232900	24239242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41236.known	chr14	+	402	4	FSM	ENSG00000100938.19	ENST00000558701.1	402	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	131.141992596659	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTAACACTGGGCATAC	21	False	NA	NA	False	NA	NA	NA	24232892	24235816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232978_24233218_24233341_24233478_24233594_24235736
transcript_41237.known	chr14	+	2025	8	FSM	ENSG00000100938.19	ENST00000557854.5	2025	8	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	39.448752599197	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	-10	True	NA	33	True	AATAAA	-23	NA	24232922	24239242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245
transcript_41238.known	chr14	+	1719	9	FSM	ENSG00000100938.19	ENST00000559104.5	1719	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	99.710831909076	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	14	False	NA	33	True	AATAAA	-23	NA	24232946	24239242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41240.known	chr14	-	1801	9	FSM	ENSG00000092330.18	ENST00000267415.12	1801	9	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	61.115541190437	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	4	True	NA	-24	True	ATTAAA	-18	NA	24242623	24239642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_41241.nic	chr14	-	1979	8	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	76	junction_2	55.0398742286176	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	NA	False	NA	-24	True	ATTAAA	-18	NA	24242669	24239642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_41242.nic	chr14	-	2067	7	NIC	ENSG00000092330.18	novel	1801	9	NA	NA	5	0	intron_retention	FALSE	canonical	3	81	junction_1	46.6502947471932	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	NA	False	NA	-24	True	ATTAAA	-18	NA	24242669	24239642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_24240156_24240262_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_41244.known	chr14	-	2168	6	FSM	ENSG00000092330.18	ENST00000399423.8	2168	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	23.6220236220354	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-1	True	NA	-24	True	ATTAAA	-18	NA	24242663	24239642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_41245.known	chr14	-	894	6	FSM	ENSG00000092330.18	ENST00000558476.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	75.3328613554536	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCTCACCAACCCAGGTC	-8	True	NA	NA	False	NA	NA	NA	24242585	24240602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242376
transcript_41246.known	chr14	-	1874	4	FSM	ENSG00000092330.18	ENST00000558566.1	1874	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	93.0244890099137	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCCTTAATAATTA	14	True	NA	-63	True	AATGAA	-45	NA	24242613	24239681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24240876_24241674_24241777_24241889_24241995_24242140
transcript_41247.known	chr14	-	885	2	FSM	ENSG00000092330.18	ENST00000559019.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGGGGGAAGGGCT	-5	True	NA	NA	False	NA	NA	NA	24242632	24240482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24240876_24242140
transcript_41248.known	chr14	-	2744	15	FSM	ENSG00000092295.12	ENST00000206765.11	2744	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	1.40697968597087	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTCTGTCCATCTT	-4	True	NA	NA	False	AATAAA	-16	NA	24263177	24249113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24249542_24254151_24254289_24254663_24254825_24254971_24255254_24255363_24255518_24255988_24256078_24258284_24258389_24258534_24258674_24259074_24259250_24259703_24259812_24259939_24260059_24260449_24260699_24261694_24261884_24262033_24262355_24263088
transcript_41251.known	chr14	-	1883	17	FSM	ENSG00000100949.15	ENST00000558376.5	1883	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.6917639603852	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCTCAGGCTACCAAG	12	True	NA	-20	True	AATAAA	-10	NA	24271549	24265556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267865_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
transcript_41252.known	chr14	-	1963	17	FSM	ENSG00000100949.15	ENST00000559974.5	1963	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.6624255169219	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCAGGCTACCAAGC	12	True	NA	-19	True	AATAAA	-11	NA	24271549	24265555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267865_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271249_24271486
transcript_41264.known	chr14	-	1427	9	FSM	ENSG00000157379.14	ENST00000288111.12	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	9.4794184948234	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-30	True	NA	-5	True	AATAAA	-20	NA	24299780	24290597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292651_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_41271.known	chr14	-	2027	7	FSM	ENSG00000157379.14	ENST00000561273.5	2027	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	6.51707159867238	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTTGGAGCTAATAAAA	-11	True	NA	23	True	NA	NA	NA	24299761	24290635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24290996_24291138_24291626_24292183_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_41278.nnic	chr14	+	602	4	NNC	ENSG00000288044.2	novel	355	2	NA	NA	-1	-73	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	4.96655480858378	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACCTTACCTGAAGTTA	-23	True	NA	17	True	CATAAA	-19	NA	24271199	24298785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24271311_24292197_24292353_24292436_24292601_24298613
transcript_41279.nnic	chr14	+	667	4	NNC	ENSG00000288044.2	novel	355	2	NA	NA	-1	-8	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	4.96655480858378	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGTAGTATTATAGTTT	-23	True	NA	82	True	AATAAA	-13	NA	24271199	24298850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24271311_24292197_24292353_24292436_24292601_24298613
transcript_41284.nnic	chr14	+	525	3	NNC	ENSG00000288044.2	novel	355	2	NA	NA	-14	-8	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	12.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAGTAGTATTATAGTTT	NA	False	NA	82	True	AATAAA	-13	NA	24271186	24298850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24271311_24292436_24292601_24298613
transcript_41289.known	chr14	+	331	2	FSM	ENSG00000288044.2	ENST00000669726.2	355	2	12	12	12	-12	multi-exon	FALSE	canonical	3	139	junction_1	0	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTGAGTAGTATTATA	-10	True	NA	78	True	AATAAA	-9	NA	24271212	24298846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24271311_24298613
transcript_4129.known	chr1	+	806	9	FSM	ENSG00000171960.12	ENST00000677356.1	806	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_8	32.4381623246447	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	272	False	NA	29	True	AATAAA	-17	NA	42658700	42676757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_41291.known	chr14	-	609	2	FSM	ENSG00000157379.14	ENST00000558114.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTACTCCGGAGGCTGAG	-19	True	NA	NA	False	NA	NA	NA	24299769	24298710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24299131_24299580
transcript_41292.known	chr14	-	719	5	FSM	ENSG00000157379.14	ENST00000559088.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	27.6258484032618	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	7107	False	NA	-5	True	AATAAA	-20	NA	24292643	24290597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292620
transcript_41293.known	chr14	-	1623	8	FSM	ENSG00000157379.14	ENST00000558340.1	1623	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	20.9060092913448	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGTGTTTTTGACTGC	7	True	NA	-10	True	AATAAA	-15	NA	24299743	24290602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292702_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_41295.known	chr14	+	6045	10	FSM	ENSG00000196943.14	ENST00000267425.8	6045	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	8.01079518563375	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGCCAGTCTTTTGTC	-21	True	NA	15	True	AATAAA	-15	NA	24299849	24309124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937
transcript_41296.known	chr14	-	1602	5	FSM	ENSG00000136305.12	ENST00000554411.6	1225	5	-286	-91	-286	91	multi-exon	TRUE	canonical	1	2	junction_1	1.29903810567666	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTCAAGTATGGAGT	3185	False	NA	93	True	NA	NA	NA	24308263	24305095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24305766_24305946_24306138_24306373_24306524_24307370_24307516_24307817
transcript_41297.nic	chr14	-	1065	4	NIC	ENSG00000136305.12	novel	1225	5	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1.88561808316413	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCTGACTCCAATTTAA	3440	False	NA	2	True	AATAAA	-23	NA	24308008	24305186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_24305766_24306373_24306524_24307370_24307516_24307817
transcript_41298.known	chr14	-	1758	10	FSM	ENSG00000129465.16	ENST00000554756.1	1758	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.05409255338946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTTCCAAGCTTGCCT	-11	True	NA	NA	False	NA	NA	NA	24339989	24336174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24336396_24336884_24336946_24337085_24337461_24337694_24337763_24337872_24338041_24338210_24338296_24338421_24338568_24339014_24339325_24339456_24339598_24339806
transcript_4130.known	chr1	+	754	10	FSM	ENSG00000171960.12	ENST00000304979.8	754	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	32.540952356176	8845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	-6	True	NA	30	True	AATAAA	-18	NA	42658422	42676758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_41300.known	chr14	-	1872	10	FSM	ENSG00000129465.16	ENST00000216274.10	1872	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.05409255338946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTGAGCTCAGCCAG	-13	True	NA	NA	False	AATAAA	-16	NA	24339991	24336024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24336396_24336884_24336946_24337085_24337461_24337694_24337763_24337872_24338041_24338248_24338296_24338421_24338568_24339014_24339325_24339456_24339598_24339806
transcript_41302.known	chr14	-	1351	2	FSM	ENSG00000129467.14	ENST00000557099.2	1351	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGCGATGGGAGTGG	1	True	NA	NA	False	AATGAA	-34	NA	24335093	24332237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24332989_24334493
transcript_41303.known	chr14	+	3169	10	FSM	ENSG00000100968.14	ENST00000555453.5	3169	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.825139531082	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGGCTCCAGAGCTCT	129	False	NA	17	True	AATAAA	-17	NA	24369166	24378055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24369377_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
transcript_41306.known	chr14	+	4762	10	FSM	ENSG00000100968.14	ENST00000250373.9	4762	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	14.0957922099005	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAAACTCAATATTTT	5	True	NA	3	True	AATAAA	-19	NA	24368183	24379601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
transcript_41308.nnic	chr14	+	1078	3	NNC	ENSG00000205978.6	novel	7635	9	NA	NA	-137	-8466	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	25.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGACAGTTGATGGAACCA	-16	True	NA	NA	False	AATAAA	-44	NA	24398865	24406252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24399087_24399229_24399445_24405610
transcript_41309.known	chr14	+	7635	9	FSM	ENSG00000205978.6	ENST00000382554.4	7635	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	14.1989216139818	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGTCCAGTTCTTTGT	-14	True	NA	28	True	AATAAA	-15	NA	24399002	24419283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24399087_24399229_24399445_24407868_24408528_24408651_24410209_24411075_24411207_24411353_24411451_24412996_24413099_24413315_24413418_24414595
transcript_4131.known	chr1	+	2060	10	FSM	ENSG00000171960.12	ENST00000676675.1	2060	10	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_9	126.155107352462	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTAAGTTTTCAACTG	NA	False	NA	-15	True	NA	NA	NA	42658367	42676713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42675287
transcript_41310.known	chr14	+	2443	8	FSM	ENSG00000100441.10	ENST00000556842.5	2443	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	33.9657690828245	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGGGCAGGAAGTGACAG	6768	False	NA	NA	False	NA	NA	NA	24429934	24437617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24429992_24430713_24430932_24431462_24432611_24432721_24432853_24432935_24433033_24436071_24436180_24436387_24436490_24437035
transcript_4132.known	chr1	+	849	10	FSM	ENSG00000171960.12	ENST00000677307.1	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	123.369163964436	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	18	False	NA	30	True	AATAAA	-18	NA	42658446	42676758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659371_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_41327.known	chr14	-	1206	6	FSM	ENSG00000100445.18	ENST00000399395.8	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	79.288334577036	3468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	11	True	NA	-13	True	AATAAA	-19	NA	24442776	24439765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442753
transcript_41328.known	chr14	-	1041	4	FSM	ENSG00000100445.18	ENST00000538105.6	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	143.327906874024	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTCTCACTAACCTT	394	False	NA	-29	True	AATAAA	-3	NA	24442448	24439781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345
transcript_41329.known	chr14	-	1960	3	FSM	ENSG00000100445.18	ENST00000556262.5	1960	3	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_2	8	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTCACTAACCTTGG	11	True	NA	-27	True	AATAAA	-5	NA	24442776	24439779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24441673
transcript_4133.known	chr1	+	2315	9	FSM	ENSG00000171960.12	ENST00000678803.1	2315	9	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	31.693847983481	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTGGATGACATCAAAAA	-3	True	NA	NA	False	NA	NA	NA	42658425	42669179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350
transcript_41330.known	chr14	-	735	5	FSM	ENSG00000100445.18	ENST00000556523.1	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	183.449414008331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGGGCCGCCGAGCCT	405	False	NA	NA	False	NA	NA	NA	24442437	24440263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24441677_24441796_24442108_24442261_24442345
transcript_41339.nnic	chr14	+	1910	2	NIC	ENSG00000258744.3	novel	1230	2	NA	NA	-46	663	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTAATCTTTTAATT	-6	True	NA	2	True	AATAAA	-13	NA	24442963	24446044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24443113_24444283
transcript_41340.nnic	chr14	+	1945	2	FSM	ENSG00000258744.3	ENST00000690491.1	1230	2	-46	-669	-46	669	multi-exon	FALSE	canonical	2	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATCTTTTAATTGATTTT	-6	True	NA	8	True	AATAAA	-19	NA	24442963	24446050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24443142_24444283
transcript_41341.known	chr14	-	4021	7	FSM	ENSG00000168952.16	ENST00000396700.5	4021	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	83.7491293487083	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTCTTGCAGTTAT	-28	True	NA	-6	True	ATTAAA	-20	NA	25050064	24809655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25010524_25010641_25049877
transcript_41343.known	chr14	-	4132	6	FSM	ENSG00000168952.16	ENST00000323944.10	4190	6	-150	208	-150	-6	multi-exon	FALSE	canonical	3	164	junction_4	12.2212928939618	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAAATTTGTTTCTTGC	NA	False	NA	-12	True	ATTAAA	-14	NA	25050297	24809661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049877
transcript_41354.known	chr14	-	896	5	FSM	ENSG00000139910.20	ENST00000344429.9	896	5	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	4.32290411644765	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGTAAGTTTGATC	15	True	NA	-10	True	AATAAA	-16	NA	26597440	26470117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_26470491_26472319_26472392_26479976_26480144_26595409_26595554_26597300
transcript_4136.known	chr1	+	1524	7	FSM	ENSG00000065978.19	ENST00000436427.1	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	1239.76755213763	7669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGTAAATTTGTC	-10	True	NA	-6	True	AATAAA	-14	NA	42682986	42702349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42683366_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_4144.known	chr1	+	2979	8	FSM	ENSG00000065978.19	ENST00000321358.12	2979	8	0	0	0	0	multi-exon	FALSE	canonical	3	2661	junction_1	317.034666230425	8226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGACTTGTGGTT	5	True	NA	NA	False	ATTAAA	-17	NA	42682417	42703805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_4145.known	chr1	-	1586	4	FSM	ENSG00000164007.11	ENST00000372539.3	1586	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	7.03957069398096	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATCATTCGGTCTG	141	False	NA	-10	True	NA	NA	NA	42740140	42734994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42736031_42738228_42738314_42738420_42738586_42739840
transcript_4146.known	chr1	+	3440	12	FSM	ENSG00000164010.15	ENST00000372517.8	3440	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	2.93173009029038	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTATTTTCATTGT	-5	True	NA	21	True	AATAAA	-22	NA	42817121	42844991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42817254_42825622_42825739_42830443_42830534_42830767_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
transcript_41476.nnic	chr14	+	1015	3	NNC	ENSG00000257842.6	novel	449	4	NA	NA	6103	-7692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAGAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	26605868	26798663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_26605995_26637194_26637334_26797913
transcript_41486.nnic	chr14	+	1704	2	NNC	ENSG00000257842.6	novel	449	4	NA	NA	6103	45	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATTAGCTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	26605868	26638772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_26605995_26637194
transcript_41487.nnic	chr14	+	1642	2	NNC	ENSG00000257842.6	novel	449	4	NA	NA	6129	45	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTATTAGCTGGGCAT	NA	False	NA	NA	False	NA	NA	NA	26605894	26638772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_26605959_26637194
transcript_41488.nnic	chr14	+	612	2	NNC	ENSG00000257842.6	novel	1800	3	NA	NA	41626	41	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTATGGTATTTTGT	NA	False	NA	4	True	AATAAA	-19	NA	26678866	26701659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_26679399_26701579
transcript_41491.known	chr14	-	578	3	FSM	ENSG00000258932.5	ENST00000556890.1	578	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAATATAATCATGG	NA	False	NA	NA	False	NA	NA	NA	27673221	27321921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_27322142_27656337_27656503_27673028
transcript_41492.nnic	chr14	+	486	4	NNC	ENSG00000257869.1	novel	508	3	NA	NA	-104	-11665	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.4142135623731	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTAATTTCTCTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	28318036	28406947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_28318246_28318414_28318533_28405425_28405473_28406835
transcript_41494.nnic	chr14	+	660	3	NNC	ENSG00000257869.1	novel	508	3	NA	NA	-109	-11665	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTAATTTCTCTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	28318031	28406947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_28318533_28405425_28405473_28406835
transcript_41498.known	chr14	-	492	4	FSM	ENSG00000184304.17	ENST00000490795.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTCATGATTTTTAG	NA	False	NA	NA	False	AATAAA	-13	NA	29597668	29591114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_29591290_29592699_29592755_29594085_29594170_29597490
transcript_41502.known	chr14	+	2334	14	FSM	ENSG00000092140.16	ENST00000438909.6	2334	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	101.32973885455	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATTATAGCCACT	-7	True	NA	6	True	AATAAA	-18	NA	30559157	30616669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_41510.known	chr14	+	565	6	FSM	ENSG00000092140.16	ENST00000550944.5	565	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	211.688828236164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTTATTTAACTGTTAA	-7	True	NA	NA	False	NA	NA	NA	30559157	30592447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30559273_30580863_30580948_30581075_30581117_30586717_30586816_30589382_30589485_30592322
transcript_41513.known	chr14	+	5770	15	FSM	ENSG00000092140.16	ENST00000206595.11	5770	15	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	35	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGACTCAGATAAATGGC	-7	True	NA	6	True	AATAAA	-17	NA	30559157	30620064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_41517.known	chr14	+	2249	26	FSM	ENSG00000092108.22	ENST00000678760.1	2249	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	143.128473756971	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATTTTCTCTGATAAAT	NA	False	NA	NA	False	AATAAA	-12	NA	30622290	30735809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30676783_30676856_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41521.known	chr14	+	2190	25	FSM	ENSG00000092108.22	ENST00000458591.7	2190	25	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	57.993878388633	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTATGATTGAAG	-5	True	NA	NA	False	GATAAA	-23	NA	30622318	30735850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41524.known	chr14	+	3589	25	FSM	ENSG00000092108.22	ENST00000676473.1	3589	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	160.264863238605	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	6	True	NA	NA	False	TATAAA	-38	NA	30622329	30737192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30643879_30644019_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41526.known	chr14	+	3446	24	FSM	ENSG00000092108.22	ENST00000676812.1	3446	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	114.845783010245	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-9	True	NA	NA	False	TATAAA	-38	NA	30622314	30737192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41527.known	chr14	+	1943	24	FSM	ENSG00000092108.22	ENST00000463622.6	1943	24	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	113.437457265116	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAACAGTGTCCTA	-5	True	NA	NA	False	GATAAA	-39	NA	30622318	30735692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41528.known	chr14	+	2058	24	FSM	ENSG00000092108.22	ENST00000544052.6	2058	24	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	99.7876952383559	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAATTTCAACATT	-5	True	NA	NA	False	ATTAAA	-12	NA	30622318	30735789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41529.known	chr14	+	4041	24	FSM	ENSG00000092108.22	ENST00000678124.1	4041	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	112.755167457105	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAATGGAAGCAAAGGAA	NA	False	NA	NA	False	AAGAAA	-23	NA	30622303	30737694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622463_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41533.known	chr14	+	1829	22	FSM	ENSG00000092108.22	ENST00000556768.5	1829	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	118.915164409467	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATTTCAACATTGT	-5	True	NA	NA	False	ATTAAA	-14	NA	30622318	30735791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41535.known	chr14	+	3296	22	FSM	ENSG00000092108.22	ENST00000678716.1	3296	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	118.128624313018	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	NA	False	NA	NA	False	TATAAA	-38	NA	30622303	30737192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41538.known	chr14	+	2372	15	FSM	ENSG00000092108.22	ENST00000678006.1	2372	15	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_11	38.0973511318741	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTCAAAAACAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	30622303	30695867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772
transcript_41548.nnic	chr14	+	1115	12	NNC	ENSG00000092108.22	novel	2358	10	NA	NA	-2847	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	147.833612076226	479	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	NA	False	NA	NA	False	AATAAA	-2	NA	30690339	30735799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_30690578_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41551.known	chr14	+	4736	11	FSM	ENSG00000092108.22	ENST00000469043.2	4736	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	127.315552859814	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTCCTGTCTTAGAA	-9	True	NA	NA	False	NA	NA	NA	30622314	30661939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30658082
transcript_41569.known	chr14	+	1729	21	FSM	ENSG00000092108.22	ENST00000557076.6	1729	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	121.583757138855	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	-7	True	NA	NA	False	NA	NA	NA	30622316	30735774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_4157.known	chr1	+	4760	5	FSM	ENSG00000164008.17	ENST00000372525.7	4760	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	20.4572725454788	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTAGATGATGCTTGA	-28	True	NA	NA	False	AATAAA	-23	NA	42767248	42779491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42767391_42767508_42767625_42773562_42773650_42774736_42774869_42775208
transcript_41570.known	chr14	+	2171	25	FSM	ENSG00000092108.22	ENST00000677340.1	2171	25	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_15	142.363329928508	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	-2	True	NA	NA	False	NA	NA	NA	30622321	30735774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622463_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41571.known	chr14	+	2135	25	FSM	ENSG00000092108.22	ENST00000554437.6	2135	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_18	160.32644107674	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	-12	True	NA	NA	False	AATAAA	-2	NA	30622311	30735799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707816_30707877_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41572.known	chr14	+	1962	22	FSM	ENSG00000092108.22	ENST00000679165.1	1962	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	114.048563471584	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATATGTATTGATTAAAAG	NA	False	NA	NA	False	NA	NA	NA	30622303	30735760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30734789_30734859_30735585
transcript_41573.known	chr14	+	2049	24	FSM	ENSG00000092108.22	ENST00000679102.1	2049	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_16	109.244371494433	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	30622303	30735774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41574.known	chr14	+	425	1	FSM	ENSG00000213867.4	ENST00000468034.1	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTTTTGGTCATTA	24	False	NA	NA	False	NA	NA	NA	30821418	30821843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30821400_30821800
transcript_41575.known	chr14	-	3970	16	FSM	ENSG00000196792.12	ENST00000355683.9	3970	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	6.20966987850401	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGAGTCCTTCATTTT	-5	True	NA	-15	True	ATTAAA	-18	NA	31026401	30893798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_30895581_30895661_30895749_30902535_30902644_30905417_30905559_30906876_30907045_30911040_30911163_30911776_30911825_30912006_30912183_30913523_30913658_30935162_30935305_30936494_30936625_30947089_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
transcript_41576.nic	chr14	-	470	5	ISM	ENSG00000196792.12	ENST00000555358.5	2208	15	358	51767	358	0	5prime_fragment	FALSE	canonical	3	24	junction_2	7.49583217528247	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGGACAAGAAATAAAA	528	False	NA	NA	False	NA	NA	NA	31025961	30947111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_30947264_30950862_30950945_30955619_30955694_30956138_30956243_31025903
transcript_41581.known	chr14	+	1819	12	FSM	ENSG00000100473.18	ENST00000643575.1	1819	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	86.7376589931	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTAAGGCAGCACACAGA	129	False	NA	NA	False	NA	NA	NA	30874891	30895029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615_30889794_30894912
transcript_41582.known	chr14	+	2860	11	FSM	ENSG00000100473.18	ENST00000644874.2	2860	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_8	38.9902551928043	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	5	True	NA	21	True	AATAAA	-22	NA	30874558	30890618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_41584.known	chr14	+	1997	11	FSM	ENSG00000100473.18	ENST00000475087.5	1997	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	86.1417436554427	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAGAA	18	False	NA	NA	False	NA	NA	NA	30874571	30895065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30894912
transcript_41586.known	chr14	+	2582	11	FSM	ENSG00000100473.18	ENST00000216361.9	2582	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	89.8615045500575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATAGCTCAATAAAAGAA	5	True	NA	-12	True	ACTAAA	-18	NA	30874513	30890100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874973_30875055_30875299_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_41590.known	chr14	+	2688	10	FSM	ENSG00000100473.18	ENST00000460581.6	2688	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	94.2726542181418	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGCTTACTTTTATTA	1	True	NA	19	True	AATAAA	-20	NA	30874763	30890616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30875056_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_41592.known	chr14	+	2536	12	FSM	ENSG00000100473.18	ENST00000396618.9	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	55.5540091612144	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	5	True	NA	21	True	AATAAA	-22	NA	30874558	30890618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_41598.known	chr14	+	4060	6	FSM	ENSG00000100478.16	ENST00000542754.7	4060	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3.81575680566778	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGTAGTGTGA	-1	True	NA	27	True	AATAAA	-24	NA	31025648	31096450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080585_31092906
transcript_41599.known	chr14	+	1608	6	FSM	ENSG00000100478.16	ENST00000554345.6	1608	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	16.1319558640606	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTTGTATTTTATAA	1	True	NA	NA	False	AATAAA	-22	NA	31025650	31085802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080645_31084768
transcript_41600.known	chr14	+	407	3	FSM	ENSG00000100478.16	ENST00000556480.1	407	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACCTCT	NA	False	NA	NA	False	TATAAA	-8	NA	31066295	31073185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31066335_31069842_31069930_31072904
transcript_41601.known	chr14	-	9080	43	FSM	ENSG00000092148.14	ENST00000553700.5	9080	43	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_19	57.3337288390092	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACTGTGTCATGTGAC	-20	True	NA	-4	True	ATTAAA	-14	NA	31207804	31100117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
transcript_41605.nic	chr14	-	808	3	ISM	ENSG00000092148.14	ENST00000554471.3	3093	8	25	8750	-9	159	5prime_fragment	FALSE	canonical	3	99	junction_2	17.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCTAAAAAAAAAAATTCT	8	True	NA	NA	False	ACTAAA	-10	NA	31207688	31177905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_31178255_31205796_31205958_31207390
transcript_41606.known	chr14	-	819	3	ISM	ENSG00000092148.14	ENST00000556224.6	1838	6	32500	0	31202	0	3prime_fragment	FALSE	canonical	3	128	junction_2	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTATAAAGTTTGAAATT	NA	False	NA	NA	False	AATAAA	-21	NA	31174974	31172953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_31173427_31173524_31173807_31174910
transcript_41607.known	chr14	-	7811	36	FSM	ENSG00000129493.15	ENST00000543095.7	7811	36	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_35	19.9693642914361	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTATTTTTAAATTAT	-1	True	NA	-2	True	AATAAA	-18	NA	31420550	31291787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389006_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
transcript_41611.nnic	chr14	-	615	4	NNC	ENSG00000129493.15	novel	507	3	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.7467947886096	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	-4	True	NA	NA	False	ATTAAA	-19	NA	31420585	31400265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_31400513_31402849_31403050_31410490_31410545_31420471
transcript_41613.known	chr14	-	480	3	FSM	ENSG00000129493.15	ENST00000549184.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_2	51.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATGAAGCAATCGATAAA	286	False	NA	NA	False	NA	NA	NA	31420295	31400376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31400513_31402849_31403050_31420151
transcript_41614.known	chr14	-	507	3	FSM	ENSG00000129493.15	ENST00000382464.6	507	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	50	False	NA	NA	False	ATTAAA	-19	NA	31420531	31400265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31400513_31402849_31403050_31420471
transcript_41617.known	chr14	-	749	4	FSM	ENSG00000203546.7	ENST00000547760.1	749	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	20.8486610281492	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	135	False	NA	-35	True	NA	NA	NA	31457376	31427506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31427793_31428143_31428189_31453274_31453345_31457028
transcript_41618.nic	chr14	-	607	4	NIC	ENSG00000203546.7	novel	749	4	NA	NA	-47	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	21.7460085737335	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	-10	True	NA	-35	True	NA	NA	NA	31457488	31427506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_31427793_31428143_31428189_31453274_31453345_31457282
transcript_41624.known	chr14	+	429	3	FSM	ENSG00000250365.7	ENST00000550431.1	429	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTTCAGTTCGTCT	NA	False	NA	NA	False	ATTAAA	-30	NA	31420943	31439945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31420978_31421847_31421969_31439671
transcript_41626.known	chr14	-	2713	3	FSM	ENSG00000129480.13	ENST00000310850.9	2713	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	8.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTGTCTCAAAGTTT	5	True	NA	-4	True	AATAAA	-20	NA	31457506	31446035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31448455_31453274_31453345_31457282
transcript_41627.known	chr14	-	823	3	FSM	ENSG00000129480.13	ENST00000549850.1	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	9.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGGACCATTCACACACTT	-10	True	NA	NA	False	NA	NA	NA	31457488	31448161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31448455_31453274_31453345_31457028
transcript_41630.nic	chr14	-	835	2	ISM	ENSG00000129480.13	ENST00000549850.1	823	3	27	4781	27	-4781	5prime_fragment	FALSE	canonical	3	50	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAGTGAGAAAGAAT	50	False	NA	NA	False	NA	NA	NA	31457461	31452942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_31453345_31457028
transcript_41631.nic	chr14	-	512	2	ISM	ENSG00000129480.13	ENST00000549850.1	823	3	15	5116	15	-5116	5prime_fragment	FALSE	canonical	3	50	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATGTGTTTGACTTTG	5	True	NA	NA	False	GATAAA	-17	NA	31457473	31453277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_31453345_31457028
transcript_41633.known	chr14	-	1400	5	FSM	ENSG00000129480.13	ENST00000356180.4	1400	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	30.8413277924281	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCTATTTTTCAGTTT	8	True	NA	-25	True	ATTAAA	-20	NA	31457425	31446991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31447249_31447389_31447570_31447704_31448455_31453274_31453345_31457282
transcript_41634.known	chr14	+	3040	11	FSM	ENSG00000151413.17	ENST00000281081.12	3040	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	7.0774289116882	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTATATCTGAACTGAAA	-12	True	NA	8	True	AATAAA	-24	NA	31561403	31861224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31846470_31846592_31850118_31850202_31859117
transcript_41640.nic	chr14	+	1325	2	ISM	ENSG00000100852.14	ENST00000345122.8	9589	7	-25	68059	-25	580	5prime_fragment	FALSE	canonical	3	26	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAGAAGAGTATATAAAT	200	False	NA	54	True	AAGAAA	-3	NA	32077278	32091669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_32077436_32090501
transcript_41641.known	chr14	-	1848	1	FSM	ENSG00000258655.2	ENST00000553596.2	1848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTCAAGTTATTCT	NA	False	NA	NA	False	AGTAAA	-14	NA	32076793	32074945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_32074900_32076800
transcript_41642.known	chr14	-	1304	1	FSM	ENSG00000286527.1	ENST00000670017.1	1304	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTAACGCCCTGTCT	NA	False	NA	NA	False	AATAAA	-16	NA	32201736	32200432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_32200400_32201700
transcript_41643.known	chr14	-	2706	5	FSM	ENSG00000129521.15	ENST00000250457.9	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	8.73212459828649	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCATTCTAATGGTTTGA	-5	True	NA	-10	True	AATAAA	-15	NA	33951074	33924226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950395
transcript_41644.known	chr14	-	1004	5	FSM	ENSG00000129521.15	ENST00000553215.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	37.9539194286967	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGGAGAATTATCACAA	243	False	NA	NA	False	NA	NA	NA	33950826	33925398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950677
transcript_41651.known	chr14	-	2662	2	FSM	ENSG00000165389.7	ENST00000298130.5	2662	2	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	0	1412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGATTATTTGAGCCT	-1	True	NA	NA	False	ATTAAA	-23	NA	34462240	34432787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34435305_34462095
transcript_41657.known	chr14	-	841	4	FSM	ENSG00000129518.10	ENST00000555705.1	841	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	187.330367710808	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTTAAAGTTAATATT	2	True	NA	NA	False	AAAAAG	-43	NA	34539698	34529355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34529476_34533443_34533540_34536093_34536276_34539255
transcript_41659.known	chr14	-	1303	6	FSM	ENSG00000129518.10	ENST00000250454.8	1303	6	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_4	44.6031389029965	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTATTGTTTTTGCT	-1	True	NA	-8	True	ATTAAA	-20	NA	34539701	34515937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
transcript_41660.known	chr14	-	1237	10	NNC	ENSG00000129518.10	novel	1303	6	NA	NA	-7	-74	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	205.542161725797	252	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTGTTTCTGAGTGTT	-11	True	NA	-20	True	ATTAAA	-36	NA	34539711	34516011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_34516488_34516489_34516587_34524684_34524690_34524694_34524719_34524720_34524736_34524740_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
transcript_41661.known	chr14	-	562	2	FSM	ENSG00000129518.10	ENST00000555683.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGTGGCATGATCATAG	-4	True	NA	NA	False	NA	NA	NA	34539704	34535863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34536276_34539554
transcript_41662.known	chr14	+	671	1	FSM	ENSG00000279423.1	ENST00000623080.1	671	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTGTAAATGTTAAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	34541043	34541714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34541000_34541700
transcript_41663.known	chr14	+	164	1	FSM	ENSG00000206596.1	ENST00000383869.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTGGAAGTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34546713	34546877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34546700_34546900
transcript_41664.known	chr14	-	164	1	FSM	ENSG00000206588.1	ENST00000383861.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTGGAAGTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34556389	34556225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34556200_34556400
transcript_41666.known	chr14	-	441	1	FSM	ENSG00000240463.1	ENST00000480487.1	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	940	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACCATGCTGGGTTAA	41	False	NA	-55	True	NA	NA	NA	34569129	34568688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34568700_34569100
transcript_41667.known	chr14	-	2975	14	FSM	ENSG00000129515.20	ENST00000652385.1	2975	14	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_13	94.2366403194544	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGAAAATGCTGTGTA	16	False	34630176	NA	False	AATAAA	-20	NA	34630160	34561411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_41668.known	chr14	-	725	8	FSM	ENSG00000129515.20	ENST00000557265.6	725	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	285.761496099564	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGTTCTAATTTAAAA	18	False	34630176	NA	False	NA	NA	NA	34630158	34586229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34609637_34609743_34629906_34629955_34630110
transcript_41669.known	chr14	-	1855	15	FSM	ENSG00000129515.20	ENST00000556162.6	1855	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	328.712555095711	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATCTTAATCAGAC	18	False	34630176	NA	False	TTTAAA	-35	NA	34630158	34562659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34604134_34604269_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629951_34630110
transcript_4167.known	chr1	-	536	5	FSM	ENSG00000228192.9	ENST00000425076.1	536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.69966214673719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	25	False	NA	NA	False	AATAAA	-18	NA	42846387	42841897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844611_42846256
transcript_41670.known	chr14	-	559	6	FSM	ENSG00000129515.20	ENST00000557341.6	559	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	404.485352021553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATATAATCAAGATGTG	-16	True	NA	NA	False	TTTAAA	-15	NA	34630153	34603364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34603472_34604134_34604269_34605595_34605718_34609637_34609743_34629906_34629955_34630110
transcript_41671.known	chr14	-	3231	5	FSM	ENSG00000165410.15	ENST00000672517.1	3231	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.8373857097755	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAGATCAAAGAGGCAT	-5	True	NA	-10	True	ATTAAA	-16	NA	34714561	34710386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34713673_34713905_34714537
transcript_41673.known	chr14	-	4306	4	FSM	ENSG00000165410.15	ENST00000298159.11	4306	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	16.391054470859	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGATCATTGAACCTCT	6	True	NA	NA	False	ATTAAA	-21	NA	34714593	34709112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714537
transcript_41675.known	chr14	-	1223	4	FSM	ENSG00000165410.15	ENST00000422678.2	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	59.6675977580983	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATAAAAATTGTGGCAT	-6	True	NA	NA	False	NA	NA	NA	34714577	34712036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713396_34713562_34714537
transcript_41676.known	chr14	-	1387	4	FSM	ENSG00000165410.15	ENST00000554470.5	1387	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	63.9079198708753	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTTGTTTTCCTTGG	95	False	NA	NA	False	AATAAA	-21	NA	34714823	34712007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713507_34713562_34714537
transcript_41677.known	chr14	-	632	4	FSM	ENSG00000165410.15	ENST00000555765.5	632	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	58.9764548122573	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTGGATCTTAAGGA	1	True	NA	NA	False	TATAAA	-13	NA	34714555	34712851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714434
transcript_4169.known	chr1	-	610	5	FSM	ENSG00000228192.9	ENST00000444563.6	646	5	33	3	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.69966214673719	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	25	False	NA	NA	False	AATAAA	-18	NA	42846387	42841897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844685_42846256
transcript_41702.known	chr14	-	580	3	FSM	ENSG00000258704.7	ENST00000556705.6	614	3	34	0	0	0	multi-exon	TRUE	canonical	3	20	junction_2	18	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATCTCTAGAGGTT	-14	True	NA	NA	False	NA	NA	NA	34982532	34963707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34964041_34969169_34969308_34982423
transcript_41704.known	chr14	+	2187	16	FSM	ENSG00000100883.13	ENST00000216774.11	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_12	53.7548344079137	6855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTAACTTTCTTTA	-15	True	NA	38	True	AATAAA	-23	NA	34982991	35029567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_41705.known	chr14	-	600	4	FSM	ENSG00000258704.7	ENST00000554945.1	600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.905603390146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAATCTCTTTTGCATTG	426	False	NA	-10	True	AATAAA	-17	NA	34982492	34963913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34964041_34969169_34969308_34971941_34972214_34982429
transcript_41706.known	chr14	+	644	3	FSM	ENSG00000100883.13	ENST00000555317.5	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_1	38.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTTTCTATTTTACT	-15	True	NA	NA	False	AATAAA	-26	NA	34982991	34999866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34983216_34996676_34996788_34999557
transcript_41707.known	chr14	+	2045	15	FSM	ENSG00000100883.13	ENST00000678477.1	2045	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	196.704066546471	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATAAGTTAAGGGGTT	-36	True	NA	24	True	AATAAA	-9	NA	34982970	35029553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_41708.known	chr14	+	6186	8	FSM	ENSG00000100890.16	ENST00000534898.9	6186	8	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	33.2817287620063	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATCATCTCCATTTAT	-27	True	NA	15	True	AATAAA	-29	NA	35122551	35277622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122636_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_41712.known	chr14	+	6118	7	FSM	ENSG00000100890.16	ENST00000250377.11	6118	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	89.3246264413621	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTTTTATCATCT	-15	True	NA	7	True	AATAAA	-21	NA	35122563	35277614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122636_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_41714.known	chr14	+	1406	7	FSM	ENSG00000100890.16	ENST00000605870.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	106.129899441937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATCATTTATCGTCC	43	False	NA	-36	True	NA	NA	NA	35122721	35274017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122911_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_41718.known	chr14	+	2232	7	FSM	ENSG00000100890.16	ENST00000603544.5	2232	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	126.154226599385	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATTCTATTAACAGC	-2	True	NA	-3	True	NA	NA	NA	35122676	35273670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122807_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_41720.known	chr14	+	789	6	FSM	ENSG00000100890.16	ENST00000557404.3	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	108.913910957233	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATATGATGAAGACTT	12	True	NA	NA	False	NA	NA	NA	35122758	35273485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122911_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_41724.known	chr14	+	578	2	FSM	ENSG00000100890.16	ENST00000605201.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCACTCTTATGTCTCG	-25	True	NA	NA	False	NA	NA	NA	35122553	35123315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122768_35122951
transcript_41726.nic	chr14	-	1952	14	NIC	ENSG00000092020.11	novel	1511	13	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_13	48.4892472677368	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	NA	False	NA	-2	True	AATAAA	-26	NA	35122551	35085471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
transcript_41728.known	chr14	-	1719	13	FSM	ENSG00000092020.11	ENST00000554222.5	1719	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	65.1342630435182	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTGGTTACTG	79	False	NA	-3	True	AATAAA	-25	NA	35122447	35085472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
transcript_41736.known	chr14	+	858	6	FSM	ENSG00000151327.13	ENST00000382406.7	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	60.7005766035216	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGCCAGATCTGAAA	-4	True	NA	34	True	NA	NA	NA	35046377	35081387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_41755.nic	chr14	+	570	3	NIC	ENSG00000151327.13	novel	540	2	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	53	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	59	False	NA	15	True	AATAAA	-27	NA	35046324	35050396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_35046407_35046504_35046629_35050032
transcript_41759.known	chr14	+	540	2	FSM	ENSG00000151327.13	ENST00000554052.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	1	True	NA	15	True	AATAAA	-27	NA	35046452	35050396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35046629_35050032
transcript_41762.known	chr14	-	1511	13	FSM	ENSG00000092020.11	ENST00000261475.10	1511	13	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_9	24.8741275670569	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	-1	True	NA	-2	True	AATAAA	-26	NA	35121990	35085471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
transcript_41763.known	chr14	-	896	6	FSM	ENSG00000092020.11	ENST00000557278.1	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	55.5193659906163	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTCATTTTTACTGTGC	53	False	NA	NA	False	NA	NA	NA	35122473	35108138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
transcript_41764.known	chr14	-	1347	5	FSM	ENSG00000092020.11	ENST00000555644.5	1347	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	11.8400802362146	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATACTAGCTGTCC	213	False	NA	NA	False	AATAAA	-20	NA	35122313	35107647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
transcript_41765.known	chr14	+	3857	15	FSM	ENSG00000258790.1	ENST00000557565.1	3857	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	1234.2299507906	965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCCTGTTGTTTTCAC	-30	True	NA	NA	False	AATAAA	-22	NA	35122548	35317474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122636_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434_35274292_35278552_35278719_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_41778.known	chr14	+	925	6	FSM	ENSG00000100902.11	ENST00000554541.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1117.03063521105	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTTTTGGAAAATAATTG	8	False	NA	NA	False	AATAAA	-5	NA	35292348	35317457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_41779.known	chr14	+	364	2	FSM	ENSG00000100902.11	ENST00000628955.1	364	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACGTTAAACAAACGG	3	True	NA	NA	False	NA	NA	NA	35292316	35293080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35292952
transcript_41780.known	chr14	+	601	2	FSM	ENSG00000100902.11	ENST00000556167.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	3	2764	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAGAAAAAAGAATT	-22	True	NA	NA	False	AAAAAG	-4	NA	35292394	35308436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35307993
transcript_41781.known	chr14	+	879	7	FSM	ENSG00000100902.11	ENST00000553809.5	879	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	1011.39833069535	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTTTGGTAACAACAAA	-19	True	NA	NA	False	ACTAAA	-41	NA	35292397	35317347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312862_35313060_35314360_35314456_35317248
transcript_41782.known	chr14	+	814	6	FSM	ENSG00000100902.11	ENST00000554961.5	814	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1120.08506819795	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCCTGTTGTTTTCAC	-24	True	NA	NA	False	AATAAA	-22	NA	35292392	35317474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35314360_35314456_35317248
transcript_41783.known	chr14	+	1002	7	FSM	ENSG00000100902.11	ENST00000555764.5	1002	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1046.43114388329	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTATTTTAAAATTTAT	34	True	NA	NA	False	AATAAA	-41	NA	35292450	35317493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292601_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_41785.known	chr14	-	1559	6	FSM	ENSG00000100906.11	ENST00000216797.10	1559	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_5	34.7252069828245	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATCCTGATCATTTT	1	True	NA	-7	True	ATTAAA	-15	NA	35404749	35401512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_41798.known	chr14	+	2637	10	FSM	ENSG00000100916.14	ENST00000216807.12	2637	10	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_6	10.7404853098618	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	1	True	NA	23	True	AATAAA	-20	NA	35826337	35871963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_41810.known	chr14	-	1809	10	NNC	ENSG00000151332.20	novel	1603	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	175.246140832097	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGACGGTGTGACT	-6	True	NA	-31	True	AATAAA	-17	NA	36320624	36298564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_36299191_36300784_36300827_36305088_36305306_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_41811.known	chr14	-	1449	8	FSM	ENSG00000151332.20	ENST00000359527.11	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	142.431652065839	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATAAACAATAGATCCA	11	True	NA	-56	True	NA	NA	NA	36320607	36298589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_36299191_36300784_36300824_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_41812.known	chr14	-	1586	9	FSM	ENSG00000151332.20	ENST00000318473.11	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	114.655939117867	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCCCTTTGACGGTGTG	-9	True	NA	-34	True	AATAAA	-14	NA	36320627	36298567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_36299188_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_41813.known	chr14	-	952	7	FSM	ENSG00000151332.20	ENST00000605579.5	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	28.6065260619554	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATCTATAAGCAAAACA	92	False	NA	NA	False	AATGAA	-44	NA	36320577	36308016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_41821.nnic	chr14	-	962	8	NNC	ENSG00000183032.12	novel	3893	10	NA	NA	33	52	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	24.3117507491706	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCGTTTGTAGAATGTTT	12	True	NA	NA	False	AATAAA	-38	NA	37172573	36711264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_36711483_36725569_36725678_36729506_36729567_36734506_36734574_36813917_36814002_36874955_36875005_37051909_37051993_37172280
transcript_41824.known	chr14	+	1924	1	FSM	ENSG00000258708.1	ENST00000556667.1	1924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGAAAATGTTTACC	78	False	NA	22	True	AATAAA	-36	NA	37171887	37173811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_37171900_37173800
transcript_41827.known	chr14	+	6258	15	FSM	ENSG00000151338.19	ENST00000396294.6	6258	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	21.6621790224345	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATATTTCAATGCAATT	1	True	NA	8	True	AATAAA	-20	NA	37197912	37551258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_37198105_37219552_37219692_37227725_37227839_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
transcript_41831.known	chr14	+	5983	13	FSM	ENSG00000151338.19	ENST00000684589.1	5983	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_12	9.21464715668605	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTTCAATGCAATTC	-18	True	NA	9	True	AATAAA	-21	NA	37197936	37551259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_37198105_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
transcript_41869.nnic	chr14	+	1240	5	NNC	ENSG00000258649.2	novel	939	4	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.3098334236006	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	NA	False	NA	18	True	AATAAA	-26	NA	38190934	38202925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38193240_38193324_38196740_38196991_38199045_38199512_38202781
transcript_41877.nnic	chr14	+	1148	4	NIC	ENSG00000258649.2	novel	1017	4	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	16.779617264871	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	NA	False	NA	18	True	AATAAA	-26	NA	38190833	38202925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38193183_38193324_38199045_38199512_38202781
transcript_41883.nnic	chr14	+	990	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	3.74165738677394	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	NA	False	NA	18	True	AATAAA	-26	NA	38190934	38202925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38193240_38193324_38199045_38199512_38202781
transcript_41884.nnic	chr14	+	881	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	17.1334630345285	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	NA	False	NA	18	True	AATAAA	-26	NA	38190934	38202925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38193240_38193324_38199154_38199512_38202781
transcript_41886.nnic	chr14	+	1133	4	NNC	ENSG00000258649.2	novel	859	3	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.2155056000751	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	NA	False	NA	18	True	AATAAA	-26	NA	38190958	38202925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38196740_38196991_38199045_38199512_38202781
transcript_41898.known	chr14	+	531	3	FSM	ENSG00000258649.2	ENST00000555655.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGACTCCTGCCTCAA	1	True	NA	16	True	AATAAA	-24	NA	38190982	38202923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_38191232_38193183_38193324_38202781
transcript_41899.nnic	chr14	+	1007	3	FSM	ENSG00000258649.2	ENST00000689498.1	859	3	-148	0	-148	0	multi-exon	FALSE	canonical	3	31	junction_1	8	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	NA	False	NA	18	True	AATAAA	-26	NA	38190834	38202925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_38191232_38199045_38199512_38202781
transcript_4190.known	chr1	+	768	3	FSM	ENSG00000164008.17	ENST00000650521.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	86	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATATATATATATATAT	29	True	NA	45	True	CATAAA	-42	NA	42767305	42775759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42767391_42774736_42774869_42775208
transcript_41903.nnic	chr14	+	803	3	NNC	ENSG00000258649.2	novel	939	4	NA	NA	-48	-6432	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	18	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	12	True	NA	NA	NA	38190934	38196491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38193240_38193324_38196068
transcript_41908.nnic	chr14	+	769	3	NIC	ENSG00000258649.2	novel	859	3	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	21	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	NA	False	NA	18	True	AATAAA	-26	NA	38190963	38202925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38199154_38199512_38202781
transcript_41914.nnic	chr14	+	1072	2	NNC	ENSG00000258649.2	novel	531	3	NA	NA	-24	-5384	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGCTAAAAATTTCATA	NA	False	NA	NA	False	AGTAAA	-29	NA	38190958	38197539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38196740
transcript_41916.known	chr14	-	3843	20	FSM	ENSG00000100934.15	ENST00000307712.11	3843	20	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_14	56.2769172284906	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	-40	True	NA	-1	True	AATAAA	-18	NA	39103235	39031918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
transcript_41917.known	chr14	+	1320	10	FSM	ENSG00000092208.19	ENST00000308317.12	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_5	32.8366702572025	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	9	True	NA	6	True	AATAAA	-22	NA	39114322	39136973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_41919.known	chr14	+	825	10	FSM	ENSG00000092208.19	ENST00000412033.7	825	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	112.063584243858	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCAATTCAAGTACAG	-8	True	NA	NA	False	NA	NA	NA	39114305	39136541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114396_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_41923.known	chr14	+	801	9	FSM	ENSG00000092208.19	ENST00000396249.7	801	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	108.757471007743	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAGAAGATATTTCTCAT	-8	True	NA	NA	False	NA	NA	NA	39114305	39136496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39136439
transcript_41926.known	chr14	+	1094	9	FSM	ENSG00000092208.19	ENST00000250379.13	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	115.565998459755	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTGTTTTTTGTT	-8	True	NA	25	True	NA	NA	NA	39114305	39136775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_41940.known	chr14	+	1476	11	FSM	ENSG00000092208.19	ENST00000525153.6	1476	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	153.125732651308	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	NA	False	NA	6	True	AATAAA	-22	NA	39114284	39136973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39121906_39122025_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_41941.known	chr14	+	659	5	FSM	ENSG00000092208.19	ENST00000525430.1	659	5	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_1	18.6346451535842	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACAAATAATATGTGGC	10	True	NA	NA	False	AGTAAA	-3	NA	39114323	39122701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429
transcript_41942.known	chr14	+	658	7	FSM	ENSG00000092208.19	ENST00000534684.7	658	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	136.866114627885	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGCAACTTACTGTT	9	True	NA	NA	False	NA	NA	NA	39114322	39132068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39131957
transcript_41948.known	chr14	-	1000	6	FSM	ENSG00000182400.15	ENST00000555269.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	43.3192797724062	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCCCTTATTTTAAACC	13	True	NA	50	True	AATGAA	-33	NA	39170353	39150117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159449_39159551_39170014
transcript_41949.known	chr14	-	3251	6	FSM	ENSG00000182400.15	ENST00000330149.10	3251	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	10.2878569196893	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTCGTGATTTTGT	33	True	NA	-5	True	AATAAA	-19	NA	39170333	39147813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159482_39159551_39170014
transcript_41958.known	chr14	-	3229	5	FSM	ENSG00000182400.15	ENST00000347691.9	3229	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	39.7523584206019	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCGTGATTTTGTGG	-27	True	NA	-3	True	AATAAA	-21	NA	39170393	39147811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39150382_39151745_39151840_39158284_39158403_39159482_39159551_39170014
transcript_4196.known	chr1	-	627	3	FSM	ENSG00000228192.9	ENST00000416809.2	627	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTAGTTTTTTTTTTTT	50	False	NA	NA	False	ACTAAA	-19	NA	42846362	42836927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42837179_42837669_42837940_42846256
transcript_4197.known	chr1	-	650	3	FSM	ENSG00000177868.12	ENST00000372522.5	650	3	0	0	0	0	multi-exon	TRUE	canonical	2	36	junction_2	316	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	582	False	NA	-32	True	AATAAA	-17	NA	42816804	42807051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42807501_42816430_42816581_42816753
transcript_41970.known	chr14	+	3537	9	FSM	ENSG00000100941.9	ENST00000216832.9	3537	9	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_6	29.7297725352886	3498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCACAGCAATCTG	10	True	NA	4	True	ATTAAA	-15	NA	39175253	39183220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323_39179463_39180502
transcript_41974.known	chr14	+	2526	24	FSM	ENSG00000150527.18	ENST00000556148.5	2526	24	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	40.7873363348602	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTATGAGTAAATTATT	16	True	NA	2	True	AATAAA	-16	NA	39267410	39350421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39267523_39276933_39276956_39279336_39279359_39279448_39279538_39291018_39291112_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_41975.known	chr14	+	3860	24	FSM	ENSG00000150527.18	ENST00000280083.7	3860	24	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_18	23.9107508782438	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACTAAAAAGAAA	-6	True	NA	NA	False	AAAACA	-4	NA	39267145	39351395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_41980.known	chr14	+	2762	23	FSM	ENSG00000150527.18	ENST00000348007.7	2762	23	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_18	25.6723232649128	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	19	False	NA	19	True	AATAAA	-20	NA	39267413	39350694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_41986.known	chr14	-	3853	4	FSM	ENSG00000165355.8	ENST00000298097.8	3771	4	-67	-15	-34	15	multi-exon	FALSE	canonical	3	55	junction_2	8.64098759787715	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTATTCTGGTTGT	NA	False	NA	15	True	AATAAA	-31	NA	39432500	39397668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39399788_39401175_39401862_39402400_39402512_39431563
transcript_41997.known	chr14	+	1424	3	FSM	ENSG00000258526.8	ENST00000650949.2	1424	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGGGTCTATTTTATG	983	False	NA	NA	False	AATAAA	-34	NA	39432598	39493518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39432676_39470317_39470401_39492254
transcript_4200.nnic	chr1	-	785	3	NNC	ENSG00000177868.12	novel	807	3	NA	NA	47	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_2	306	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	36	False	NA	-32	True	AATAAA	-17	NA	42817350	42807051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_42807501_42816430_42816606_42817189
transcript_42000.nnic	chr14	+	349	3	NIC	ENSG00000258526.8	novel	1424	3	NA	NA	-22	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGAATTTATTCTTTA	961	False	NA	NA	False	AATAAA	-19	NA	39432576	39513783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_39432676_39470317_39470401_39513616
transcript_42002.nic	chr14	+	730	3	FSM	ENSG00000258526.8	ENST00000685977.1	732	3	2	0	2	0	multi-exon	FALSE	canonical	2	3	junction_2	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAGGAACTTGTTATG	-13	True	NA	NA	False	AATAAA	-24	NA	39432613	39470743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39432676_39433487_39433730_39470317
transcript_42003.known	chr14	+	823	2	FSM	ENSG00000258526.8	ENST00000666503.1	823	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAGGAGAGAGGTAAGCT	4	True	NA	NA	False	AGTAAA	-2	NA	39432630	39471095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39432676_39470317
transcript_42005.nnic	chr14	-	1370	4	NNC	ENSG00000286123.1	novel	869	3	NA	NA	-202	184	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.816496580927726	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGTTTGCTTAGTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	40348533	40267098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_40267565_40286815_40286951_40318345_40318461_40347879
transcript_42006.known	chr14	-	869	3	FSM	ENSG00000286123.1	ENST00000652631.1	869	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTTTTATTTTAATAAA	NA	False	NA	NA	False	AATAAA	-20	NA	40348331	40267282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_40267565_40286815_40286951_40347879
transcript_4202.known	chr1	-	807	3	FSM	ENSG00000177868.12	ENST00000372521.9	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	57.5	3865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-11	True	NA	-32	True	AATAAA	-17	NA	42817397	42807051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42807501_42816430_42816581_42817189
transcript_4203.known	chr1	+	1859	4	FSM	ENSG00000164011.18	ENST00000372506.5	1859	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	14.0554457615387	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	14	True	NA	NA	False	AGTAAA	-16	NA	42846627	42852477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850949
transcript_42040.nnic	chr14	+	707	5	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-254	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	60.9282364753814	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	NA	False	NA	-1	True	AATAAA	-11	NA	40954438	41149309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_40954677_40954822_40954953_40962789_40962843_40974339_40974391_41149074
transcript_42051.known	chr14	+	696	4	FSM	ENSG00000251363.3	ENST00000515218.2	696	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.4423989249782	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTACAACTTGCTGATAG	NA	False	NA	NA	False	AATAAA	-35	NA	40954897	40975877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_40975340
transcript_42059.nnic	chr14	+	817	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-301	-42861	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	71.6720928178387	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCTTCTCAATGACT	NA	False	NA	NA	False	AATAAA	-3	NA	40954391	41106448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41106296
transcript_42060.nnic	chr14	+	886	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-301	-8255	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	42.4578222082418	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGACACTTCGTTC	NA	False	NA	0	True	AATAAA	-22	NA	40954391	41141054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
transcript_42061.nnic	chr14	+	1748	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-301	-7393	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_3	42.4578222082418	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAATAGATCTTCAATT	NA	False	NA	NA	False	AATAAA	-22	NA	40954391	41141916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
transcript_42062.known	chr14	+	599	4	FSM	ENSG00000251363.3	ENST00000651006.1	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	26.9196334794266	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	NA	False	NA	-1	True	AATAAA	-11	NA	40954692	41149309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_41149074
transcript_4207.known	chr1	+	1683	3	FSM	ENSG00000164011.18	ENST00000372507.5	1683	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	12	True	NA	NA	False	AGTAAA	-16	NA	42846625	42852477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42846658_42849290_42849414_42850949
transcript_42083.known	chr14	-	530	2	FSM	ENSG00000258636.2	ENST00000557067.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATATCCCATTAAAAAGT	NA	False	NA	NA	False	AATAAA	-7	NA	41604856	41587860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_41588288_41604753
transcript_42085.known	chr14	+	4417	6	FSM	ENSG00000165379.14	ENST00000298119.9	4417	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2.56124969497314	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATTGCCTGATTTG	-24	True	NA	13	True	AATAAA	-19	NA	41606875	41904549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_41608563_41766853_41767030_41886605_41888011_41891249_41891963_41898916_41898961_41904157
transcript_42086.known	chr14	+	333	1	FSM	ENSG00000259051.1	ENST00000554987.1	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATACCCAAATAAAACGA	NA	False	NA	NA	False	NA	NA	NA	43300262	43300595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_43300300_43300600
transcript_42088.known	chr14	+	2935	5	FSM	ENSG00000179476.8	ENST00000325192.8	2935	5	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	3.93700393700591	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGCTCCCAGATTTTC	-16	True	NA	17	True	AATAAA	-30	NA	44897274	44907257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_44897569_44900434_44900960_44903206_44903297_44904394_44904530_44905366
transcript_42091.known	chr14	-	6522	5	FSM	ENSG00000179454.14	ENST00000396128.9	6522	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2.27760839478607	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATATGTCATATGAT	-17	True	NA	-20	True	AATAAA	-14	NA	44961947	44924323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961845
transcript_42097.nnic	chr14	-	357	3	NNC	ENSG00000179454.14	novel	656	3	NA	NA	-9	7546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTAGTATTCTGT	-26	True	NA	NA	False	AATAAA	-21	NA	44961956	44937686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_44937813_44945808_44945929_44961845
transcript_42098.nic	chr14	-	2259	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-13	8990	7	-4501	5prime_fragment	FALSE	canonical	3	27	junction_1	0.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAAGAAAAGA	-30	True	NA	NA	False	NA	NA	NA	44961960	44933313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_42100.nic	chr14	-	2015	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-13	9234	7	-4745	5prime_fragment	FALSE	canonical	3	27	junction_1	0.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAAGTAACTAGTTATA	-30	True	NA	-35	True	AATAAA	-27	NA	44961960	44933557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_42104.nnic	chr14	-	1156	3	NNC	ENSG00000179454.14	novel	847	3	NA	NA	-12	7543	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	12	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTAGTATTC	NA	False	NA	NA	False	AATAAA	-18	NA	44961979	44937689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_44937813_44945029_44945929_44961845
transcript_42105.known	chr14	-	849	2	FSM	ENSG00000249163.3	ENST00000556389.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTCTCCCTTTAAGAT	NA	False	NA	NA	False	AATAAA	-22	NA	45083977	45083044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45083388_45083471
transcript_4212.known	chr1	+	1577	2	FSM	ENSG00000164011.18	ENST00000372508.7	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	-5	True	NA	NA	False	AGTAAA	-16	NA	42846608	42852477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42846658_42850949
transcript_42121.known	chr14	-	643	6	FSM	ENSG00000100442.11	ENST00000557324.5	643	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	1497.16807339724	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGGCAAAGTTATCAGA	-11	True	NA	NA	False	AAGAAA	-29	NA	45134483	45120909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45133322_45133440_45134348
transcript_42127.known	chr14	+	3507	13	FSM	ENSG00000185246.18	ENST00000477626.5	3507	13	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_7	44.1150641945457	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	2	True	NA	24	True	AATAAA	-21	NA	45084117	45115601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45084250_45095220_45095564_45096102_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_42128.known	chr14	+	582	3	FSM	ENSG00000185246.18	ENST00000553605.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	171	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCGTACATCACTGAATAA	-9	True	NA	NA	False	ATTAAA	-13	NA	45084106	45096228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45084250_45095220_45095534_45096102
transcript_42129.known	chr14	-	1299	7	FSM	ENSG00000100442.11	ENST00000396062.4	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	2862	junction_2	110.878937985935	8561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGAGTCTTCCGTTTT	-9	True	NA	-4	True	AATAAA	-15	NA	45134481	45115598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
transcript_4213.known	chr1	-	541	2	FSM	ENSG00000117394.24	ENST00000460369.3	541	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTTTTGACAGTTTGG	2216	False	NA	NA	False	AATAAA	-13	NA	42958859	42951615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42951931_42958633
transcript_42130.known	chr14	+	3174	15	FSM	ENSG00000185246.18	ENST00000424478.5	3174	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	96.4507117439699	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	12	True	NA	24	True	AATAAA	-21	NA	45084127	45115601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096423_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_42131.known	chr14	+	2354	11	FSM	ENSG00000187790.11	ENST00000556036.5	2354	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	7.23118247591637	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGAAAACAGTTTT	1	True	NA	NA	False	ATTAAA	-42	NA	45135939	45167423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949
transcript_42133.known	chr14	+	7131	23	FSM	ENSG00000187790.11	ENST00000267430.10	7131	23	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	8.38584009205916	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCGGGTTATTTCTTC	-9	True	NA	NA	False	ATTAAA	-21	NA	45135929	45200890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949_45167164_45170588_45170747_45173054_45173211_45175070_45176977_45181429_45181525_45181636_45181706_45183773_45183903_45185216_45185374_45187780_45187888_45188801_45189363_45196171_45196548_45198643_45198936_45199869
transcript_42136.known	chr14	-	4577	17	FSM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_14	35.957440120231	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	277	False	45253219	-2	True	AATAAA	-21	NA	45253202	45203189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_42145.known	chr14	-	1950	8	FSM	ENSG00000129534.14	ENST00000627697.1	1950	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	119.353872743097	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCTGTCTCAGCCTCCC	77	False	NA	NA	False	NA	NA	NA	45253402	45232572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45232628_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_42146.known	chr14	-	808	3	FSM	ENSG00000129534.14	ENST00000451174.1	808	3	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_2	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGCAGCATACCTAC	7	True	NA	NA	False	AATGAA	-29	NA	45253177	45246820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45247378_45250030_45250139_45253034
transcript_42147.known	chr14	+	351	1	FSM	ENSG00000258608.1	ENST00000555084.1	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAATGTATGATGAATTT	NA	False	NA	NA	False	AATGAA	-37	NA	45290035	45290386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45290000_45290400
transcript_42150.nnic	chr14	+	1798	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	6	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGTCTGTTTGGTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	47104567	47108723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_47104830_47106444_47106733_47107475
transcript_42152.nnic	chr14	+	975	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	5.5	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGGTGCTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	47104567	47108729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_47104830_47106444_47106733_47108304
transcript_42156.nnic	chr14	+	777	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	15	122	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGGTGCTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	47104579	47108729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_47104830_47106630_47106733_47108304
transcript_4216.known	chr1	-	3384	10	FSM	ENSG00000117394.24	ENST00000426263.10	3384	10	0	0	0	0	multi-exon	TRUE	canonical	3	478	junction_7	55.6372732333236	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGAGAAGTTTGCTTTT	-1	True	NA	4	True	AATAAA	-41	NA	42958868	42925352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42927242_42927604_42927809_42928931_42929034_42929209_42929315_42929592_42929781_42929872_42930036_42930625_42930867_42931045_42931207_42943225_42943322_42958633
transcript_42160.nnic	chr14	-	467	3	NNC	ENSG00000259129.6	novel	3173	3	NA	NA	-26	82519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCAGTCCTATCGGATT	NA	False	NA	NA	False	AATAAA	-24	NA	47795118	47682434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_47682717_47789905_47789944_47794971
transcript_42161.nnic	chr14	-	418	3	NNC	ENSG00000259129.6	novel	3173	3	NA	NA	-26	37245	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	4	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGAGAAAATGTGATGT	NA	False	NA	NA	False	AATAAA	-13	NA	47795118	47727708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_47727942_47789905_47789944_47794971
transcript_42162.nnic	chr14	-	291	3	NNC	ENSG00000259129.6	novel	3173	3	NA	NA	-26	-21364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCTTCTGTGCAATTT	NA	False	NA	NA	False	TTTAAA	-1	NA	47795118	47788963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_47789070_47789905_47789944_47794971
transcript_4218.known	chr1	+	1124	4	FSM	ENSG00000227533.7	ENST00000431759.5	1124	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.10960933531265	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTAAGCTTTATTTT	8	True	NA	NA	False	AATAAA	-17	NA	42959048	42983358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42959578_42970248_42970395_42973973_42974189_42983124
transcript_42188.nnic	chr14	-	1532	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2476	513	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTCTTTCTTTAGCACT	NA	False	NA	-3	True	AATAAA	-18	NA	48268085	48261507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_42191.nnic	chr14	-	1271	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2476	252	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGCCCTAAATCTTGC	NA	False	NA	-14	True	ATTAAA	-19	NA	48268085	48261768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_42193.nnic	chr14	-	989	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2645	-199	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACATGGTTGGAATTACAG	NA	False	NA	-5	True	AATAAA	-27	NA	48268254	48262219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_42195.nnic	chr14	-	606	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2474	-411	at_least_one_novel_splicesite	FALSE	canonical	3	124	junction_1	18	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTAGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	48268083	48262431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_42197.nnic	chr14	-	934	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2476	-411	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	76	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTAGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	48268085	48262431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_48262810_48265560_48265755_48267723
transcript_4220.known	chr1	+	3075	3	FSM	ENSG00000227533.7	ENST00000416689.2	3106	3	31	0	4	0	multi-exon	FALSE	canonical	3	6	junction_2	3	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	42959103	42976428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42959578_42970248_42970395_42973973
transcript_42201.known	chr14	-	512	2	FSM	ENSG00000287492.1	ENST00000670345.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAATAACATGTAGCAT	NA	False	NA	NA	False	AATAAA	-39	NA	48265609	48262020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_48262484_48265560
transcript_42210.known	chr14	+	1597	5	FSM	ENSG00000165501.17	ENST00000540712.1	1597	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	99.4192511538887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTGTTAACTTTTTT	13	True	NA	13	True	ATTAAA	-16	NA	49598951	49614671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49599204_49601541_49601650_49602369_49602469_49607399_49608122_49614255
transcript_42233.known	chr14	-	488	3	FSM	ENSG00000213741.11	ENST00000557111.5	488	3	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_2	7968.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	NA	False	NA	30	True	AATAAA	-13	NA	49598690	49583578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49583676_49585949_49586050_49598399
transcript_42237.known	chr14	-	403	1	FSM	ENSG00000244270.1	ENST00000497398.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGAATGTGTTTGTTTT	9064	False	NA	-97	True	NA	NA	NA	49577794	49577391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49577400_49577800
transcript_42238.known	chr14	+	299	1	FSM	ENSG00000276168.1	ENST00000618786.1	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	12	False	NA	-12	True	NA	NA	NA	49586579	49586878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49586600_49586900
transcript_42239.known	chr14	+	579	1	FSM	ENSG00000258568.1	ENST00000555758.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGGATCAAGATGTATA	936	False	NA	NA	False	AAGAAA	-19	NA	49599993	49600572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49600000_49600600
transcript_42240.known	chr14	+	957	3	FSM	ENSG00000165501.17	ENST00000318317.8	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	149	3209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	6	True	NA	12	True	ATTAAA	-15	NA	49598760	49614670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49599204_49602369_49602469_49614255
transcript_42241.known	chr14	-	295	3	FSM	ENSG00000213741.11	ENST00000245458.11	295	3	0	0	0	0	multi-exon	FALSE	canonical	3	15954	junction_1	2642.5	314700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	-4	True	NA	-31	True	AATAAA	-15	NA	49586380	49583576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49583676_49585949_49586050_49586284
transcript_42242.known	chr14	-	7062	3	FSM	ENSG00000213741.11	ENST00000396020.7	7062	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	10575	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTTCTATGTGATGGT	0	True	NA	1	True	AATAAA	-29	NA	49586376	49570983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49577854_49585949_49586050_49586284
transcript_42243.known	chr14	-	677	4	FSM	ENSG00000213741.11	ENST00000556230.2	677	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9028.08249605394	23656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	NA	False	NA	-31	True	AATAAA	-15	NA	49598683	49583576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49583676_49585949_49586050_49586284_49586479_49598399
transcript_42244.known	chr14	-	499	2	FSM	ENSG00000213741.11	ENST00000557367.2	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	15954	junction_1	0	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	507	False	NA	30	True	AATAAA	-13	NA	49586351	49583578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49583676_49585949
transcript_42245.known	chr14	-	844	2	FSM	ENSG00000213741.11	ENST00000554075.2	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	21239	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCGGTTCAAGCGATTC	0	True	NA	NA	False	NA	NA	NA	49586376	49585297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49586050_49586284
transcript_42246.known	chr14	-	333	3	FSM	ENSG00000213741.11	ENST00000557519.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGTTTTTTTTTTTTT	533	False	NA	NA	False	AATATA	-16	NA	49586325	49585389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49585582_49585949_49586050_49586284
transcript_42247.known	chr14	+	1502	4	FSM	ENSG00000165501.17	ENST00000298288.11	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	151.633329669524	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTAACTTTTTTT	1	True	NA	14	True	ATTAAA	-17	NA	49598939	49614672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49599204_49602369_49602469_49607399_49608122_49614255
transcript_42252.known	chr14	-	676	2	FSM	ENSG00000165502.7	ENST00000298289.7	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	6112	junction_1	0	34411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTTAGAAGGATCTTTA	-6	True	NA	NA	False	CATAAA	-7	NA	49620626	49618529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49619141_49620561
transcript_42253.known	chr14	-	2469	2	FSM	ENSG00000258377.1	ENST00000555043.1	2469	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACCCGCAACTGCCCCG	781	False	NA	NA	False	NA	NA	NA	49623480	49620814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49621049_49621245
transcript_42257.known	chr14	-	2977	3	FSM	ENSG00000165506.15	ENST00000298292.13	2977	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	22	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-12	True	NA	-15	True	AATAAA	-20	NA	49635244	49625173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49626049_49628011_49628156_49633286
transcript_42259.known	chr14	-	2819	2	FSM	ENSG00000165506.15	ENST00000406043.3	2819	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	2	True	NA	-15	True	AATAAA	-20	NA	49635230	49625173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49626049_49633286
transcript_42262.known	chr14	-	1692	19	FSM	ENSG00000100479.13	ENST00000216367.10	1692	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_14	15.1703292280981	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	-3	True	NA	-16	True	AATAAA	-17	NA	49688214	49643554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_42267.known	chr14	-	1568	18	FSM	ENSG00000100479.13	ENST00000556584.5	1568	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	30.7706101633846	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATATTACAATAAAATTAT	36	False	NA	-47	True	AAGAAA	-42	NA	49688197	49643585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664664_49665093_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
transcript_42282.known	chr14	-	1581	17	FSM	ENSG00000100479.13	ENST00000554396.5	1581	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_12	15.3132652869987	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATTATTGTCGAAGT	1	True	NA	NA	False	AATATA	-6	NA	49688210	49650187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_42294.known	chr14	-	496	3	FSM	ENSG00000100479.13	ENST00000553805.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	13	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGTTGATCTGACTTTT	30	False	NA	55	True	NA	NA	NA	49688203	49679473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49679801_49683592_49683694_49688135
transcript_42300.known	chr14	-	5819	33	FSM	ENSG00000165525.18	ENST00000298310.10	5819	33	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_19	22.9414804107647	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGTAGTATATGCCTTC	17	True	NA	NA	False	AATAAA	-13	NA	49852788	49782082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49784714_49784924_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_42320.nic	chr14	-	1636	14	NIC	ENSG00000165525.18	novel	5819	33	NA	NA	-263	-102	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	52.1824291994898	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAACAAAAGAATAAAC	9760	False	NA	NA	False	AATGAA	-24	NA	49853084	49828714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_49828788_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_42327.nic	chr14	-	1656	14	ISM	ENSG00000165525.18	ENST00000298310.10	5819	33	-296	46632	-263	-102	5prime_fragment	FALSE	canonical	3	154	junction_3	26.9753339006815	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAACAAAAGAATAAAC	9760	False	NA	NA	False	AATGAA	-24	NA	49853084	49828714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49846139_49846266_49851562_49851666_49851806_49851876_49852694
transcript_42329.known	chr14	+	4969	13	FSM	ENSG00000165516.11	ENST00000298307.10	4969	13	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_5	65.3696221497417	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGTGCTGAAGTATAA	16	True	NA	19	True	AATAAA	-19	NA	49768152	49786385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_42342.known	chr14	+	1756	12	FSM	ENSG00000165516.11	ENST00000555443.5	1756	12	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_5	67.6521242634359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAAATGTATTTAACA	31	False	NA	0	True	NA	NA	NA	49768167	49783115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_42354.known	chr14	-	590	4	FSM	ENSG00000165525.18	ENST00000556672.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	22.5289936649544	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTTATCTGTAGGTCT	-16	True	NA	NA	False	AATAAA	-23	NA	49852821	49845974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49846266_49851562_49851666_49851806_49851876_49852694
transcript_42356.known	chr14	-	3029	31	FSM	ENSG00000165525.18	ENST00000555970.5	3029	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	41.2337510083939	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAAAAGACTTATTCC	19	True	NA	NA	False	AAAACA	-39	NA	49852786	49784955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49785005_49785091_49785136_49785219_49785321_49786717_49786751_49789145_49789344_49789495_49789574_49795790_49795945_49799474_49799525_49799635_49799679_49800419_49800697_49802452_49802574_49802668_49802728_49803236_49803295_49806020_49806134_49813987_49814051_49814753_49814858_49825866_49825956_49828290_49828355_49828615_49828808_49829053_49829263_49829348_49829427_49831298_49831362_49832050_49832127_49832206_49832278_49833422_49833497_49834362_49834450_49838138_49838207_49840717_49840867_49851562_49851666_49851806_49851876_49852694
transcript_42357.known	chr14	-	299	1	FSM	ENSG00000278771.1	ENST00000610674.1	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTCTCACCTTATAA	-3	True	NA	NA	False	NA	NA	NA	49853914	49853615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49853600_49853900
transcript_42358.known	chr14	-	1299	3	FSM	ENSG00000282885.2	ENST00000659240.1	1299	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTTCTGGGTCTGCC	5246	False	NA	NA	False	AATAAA	-17	NA	49862914	49861175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49861897_49862133_49862317_49862519
transcript_42359.known	chr14	-	300	1	FSM	ENSG00000274012.1	ENST00000490232.3	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCCTCCCTCATTAA	-5	True	NA	0	True	NA	NA	NA	49862849	49862549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49862500_49862800
transcript_42363.known	chr14	-	1772	6	FSM	ENSG00000100483.14	ENST00000395860.7	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	14.4277510374971	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	-4	True	NA	-13	True	AATAAA	-15	NA	50116572	50108636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_42364.known	chr14	-	1793	6	FSM	ENSG00000100483.14	ENST00000491402.5	1793	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	14.7105404387466	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTGTGAATTTCAGAAA	NA	False	NA	-9	True	AATAAA	-19	NA	50116600	50108632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_42367.known	chr14	-	795	5	FSM	ENSG00000100483.14	ENST00000395859.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.9903828367341	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAAAATTCCTGCTTG	NA	False	NA	NA	False	GGGGCT	-8	NA	50116600	50109536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50109714_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_42368.nic	chr14	-	1699	5	NIC	ENSG00000100483.14	novel	1793	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	26.099568961958	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	NA	False	NA	-13	True	AATAAA	-15	NA	50116615	50108636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_50109714_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_4237.known	chr1	+	530	4	FSM	ENSG00000186973.11	ENST00000410025.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	0	True	NA	NA	False	AATAAA	-19	NA	43147916	43156396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43148092_43150760_43150821_43152827_43152932_43156205
transcript_42374.known	chr14	-	1849	5	FSM	ENSG00000100483.14	ENST00000484763.1	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	16.2076370887307	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTGTGACTGTGAA	10	True	NA	-18	True	AATAAA	-10	NA	50116558	50108641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079
transcript_42380.known	chr14	-	1958	11	FSM	ENSG00000087299.12	ENST00000421284.7	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	12.8514590611339	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAATTTTGAAGAGT	-4	True	NA	NA	False	AATACA	-18	NA	50312229	50245650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50246121_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_4239.known	chr1	+	536	4	FSM	ENSG00000186973.11	ENST00000335282.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	-13	True	NA	NA	False	AATAAA	-19	NA	43147903	43156396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43148085_43150760_43150821_43152827_43152932_43156205
transcript_42391.known	chr14	-	6095	10	FSM	ENSG00000087299.12	ENST00000267436.9	6095	10	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	6.51683479938453	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTGTCCCTGGGAT	-4	True	NA	-5	True	ATTAAA	-16	NA	50312229	50242433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_42399.nic	chr14	-	901	6	ISM	ENSG00000087299.12	ENST00000421284.7	1958	11	-12	32797	-12	3995	5prime_fragment	FALSE	canonical	3	82	junction_5	6.5299310869258	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTGTATTTTAAGTTATT	NA	False	NA	NA	False	ATTAAA	-18	NA	50312241	50278447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_4240.known	chr1	+	448	4	FSM	ENSG00000186973.11	ENST00000409396.5	448	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTGGGGCTTAGGAGATG	6	True	NA	NA	False	NA	NA	NA	43147922	43156279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43148085_43150760_43150821_43152827_43152980_43156205
transcript_42405.known	chr14	-	548	4	FSM	ENSG00000087299.12	ENST00000556393.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	43.1354455948547	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGCATTTTATTAGAGC	78	False	NA	NA	False	NA	NA	NA	50312147	50302016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50302169_50302901_50303018_50311290_50311434_50312010
transcript_42409.known	chr14	+	2944	6	FSM	ENSG00000125375.18	ENST00000557421.7	2944	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	92.2119298138804	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-6	True	NA	15	True	AATAAA	-25	NA	50312323	50327957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_4243.known	chr1	+	476	3	FSM	ENSG00000186973.11	ENST00000409337.5	476	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	43147866	43156396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43148092_43150760_43150821_43156205
transcript_42434.known	chr14	+	2908	5	FSM	ENSG00000125375.18	ENST00000554438.6	2908	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	60.8173494983134	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	-6	True	NA	15	True	AATAAA	-25	NA	50312323	50327957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_42466.nic	chr14	+	608	3	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	-48	1814	-48	0	5prime_fragment	FALSE	canonical	3	220	junction_1	44	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTCCTCTCCTTCCTC	772	False	NA	11	True	ATTAAA	-13	NA	50312275	50322892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_50312390_50321482_50321595_50322510
transcript_42468.known	chr14	+	620	5	FSM	ENSG00000125375.18	ENST00000554951.6	666	5	0	46	0	-46	multi-exon	FALSE	canonical	1	1	junction_1	113.38292419937	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAGCACTGCCTTCTC	754	False	NA	-48	True	AAAAAG	-20	NA	50321318	50325677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50321377_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_42469.known	chr14	-	3277	33	FSM	ENSG00000012983.12	ENST00000557390.6	3277	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	62.1470031457672	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCCTTATTTATTA	0	True	NA	NA	False	AAAACA	-4	NA	50532619	50419559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429257_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532447
transcript_42470.known	chr14	-	4354	33	FSM	ENSG00000012983.12	ENST00000013125.9	4354	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	55.5404905789461	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATATAAAGTTATTTATT	10	True	NA	-52	True	AATAAA	-14	NA	50532609	50418524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532399
transcript_42473.known	chr14	+	2853	14	FSM	ENSG00000198513.14	ENST00000441560.6	2853	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10.4745394328992	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTACTGAATTTGAAAAT	235	False	NA	NA	False	ATTAAA	-32	NA	50533025	50633049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50533368_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_42480.known	chr14	-	668	1	FSM	ENSG00000269906.1	ENST00000602954.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTTTTCAGATTCAAGTA	5716	False	NA	-1	True	AATAAA	-17	NA	50663178	50662510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50662500_50663200
transcript_42481.known	chr14	-	4788	18	FSM	ENSG00000100503.26	ENST00000389869.7	4788	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_17	6.43949749807247	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTAAGAACTTAGGAT	NA	False	NA	NA	False	AATAAA	-19	NA	50766795	50725827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50726067_50729522_50729724_50735515_50735618_50738139_50738287_50739307_50739488_50741581_50741729_50743415_50743530_50744242_50744366_50747991_50748106_50752517_50752734_50754562_50754633_50754741_50754868_50756491_50758631_50759856_50760360_50761789_50761912_50763825_50763965_50766306_50766397_50766779
transcript_42484.known	chr14	-	2696	19	FSM	ENSG00000100504.17	ENST00000544180.6	2696	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	51.9091085991231	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAGTGCCAAAACTTAT	0	True	NA	-18	True	AATAAA	-20	NA	50944483	50905217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50944160
transcript_42486.nnic	chr14	+	1268	6	NNC	ENSG00000131969.15	novel	850	6	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	94.1798279888002	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50893505	50904970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_50893759_50895620_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42488.known	chr14	+	850	6	FSM	ENSG00000131969.15	ENST00000554566.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	87.3558240760168	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACATGCTGAAACCTCA	NA	False	NA	NA	False	NA	NA	NA	50893581	50904571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50893759_50895563_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42489.nnic	chr14	+	1414	6	NNC	ENSG00000131969.15	novel	850	6	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	89.4972625279679	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50893545	50904970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_50893759_50895434_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42492.nic	chr14	+	1180	5	NIC	ENSG00000131969.15	novel	850	6	NA	NA	-90	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	97.9298218113359	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50893491	50904970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_50893759_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42494.nnic	chr14	+	961	5	NNC	ENSG00000131969.15	novel	588	4	NA	NA	-86	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	104.841249038725	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50893495	50904970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_50893544_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42503.nnic	chr14	+	1101	4	NIC	ENSG00000131969.15	novel	850	6	NA	NA	-90	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	122.411873062488	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	NA	False	NA	21	True	AATAAA	-21	NA	50893491	50904970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_50893759_50901828_50901912_50904073_50904193_50904338
transcript_42509.known	chr14	-	2799	20	FSM	ENSG00000100504.17	ENST00000216392.8	2799	20	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_13	35.9477922453246	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	0	True	NA	-17	True	AATAAA	-21	NA	50944483	50905216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_42510.known	chr14	-	1459	5	FSM	ENSG00000100504.17	ENST00000530336.2	1459	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	19.6516538744198	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACACTGTGGGTCCCA	13	False	NA	15	True	AATAAA	-43	NA	50944470	50923236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_42513.known	chr14	+	4025	8	FSM	ENSG00000139921.13	ENST00000457354.7	4025	8	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_7	126.628655234629	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAAGTCAGATTATATA	0	True	NA	36	True	AATAAA	-30	NA	51240246	51257655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51240445_51243855_51243972_51245312_51245359_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
transcript_42514.known	chr14	+	943	3	FSM	ENSG00000139921.13	ENST00000555574.1	943	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	733.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGGTAGAGTAATAGGT	NA	False	NA	NA	False	AAAAAG	-26	NA	51240161	51245851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51240445_51243855_51243977_51245312
transcript_42518.known	chr14	+	4828	14	FSM	ENSG00000139926.16	ENST00000395718.6	4828	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	14.6840492295262	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	NA	False	NA	25	True	AATAAA	-21	NA	51651857	51730727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701136_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_42519.known	chr14	+	4800	14	FSM	ENSG00000139926.16	ENST00000344768.10	4800	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	17.780049986285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	-19	True	NA	25	True	AATAAA	-21	NA	51651909	51730727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701160_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_42526.known	chr14	+	2125	4	FSM	ENSG00000186469.9	ENST00000556766.6	3573	4	34	1414	4	1220	multi-exon	FALSE	canonical	3	120	junction_2	29.4089933334837	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGAGAAAAAGTT	3	True	NA	NA	False	AAAAAG	-5	NA	51860645	51968381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51860791_51877616_51877658_51950649_51950766_51966558
transcript_42529.known	chr14	+	3729	3	FSM	ENSG00000186469.9	ENST00000335281.8	3729	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	83.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATGCAGTCAATTT	14	False	NA	23	True	AATAAA	-17	NA	51860413	51969794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51860791_51950649_51950766_51966558
transcript_42532.known	chr14	+	578	2	FSM	ENSG00000186469.9	ENST00000557208.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGGTTGTAAACATTG	-2	True	NA	NA	False	NA	NA	NA	51860640	51878044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51860791_51877616
transcript_42534.known	chr14	+	3424	3	FSM	ENSG00000186469.9	ENST00000556752.2	3424	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	36	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCAATTTCATTGT	964	False	NA	29	True	AATAAA	-23	NA	51877591	51969800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51877658_51950649_51950766_51966558
transcript_42535.known	chr14	+	908	5	FSM	ENSG00000186469.9	ENST00000555472.5	908	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	86.7968173379646	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTGTGACCTTCTTGG	-1	True	NA	12	True	ATTAAA	-23	NA	51860641	51967040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51860791_51877616_51877658_51913008_51913129_51950649_51950766_51966558
transcript_42539.known	chr14	-	3827	18	NNC	ENSG00000087303.19	novel	4870	22	NA	NA	-169	6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	11.9601414163446	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGGATCTATATTGTC	101	False	NA	0	True	AATAAA	-21	NA	52069228	52004802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_52005497_52005736_52005850_52006536_52006661_52007809_52007968_52010875_52011048_52011553_52011684_52014286_52014457_52015053_52015276_52019060_52019295_52020058_52020179_52027200_52027345_52028721_52028851_52029546_52029691_52038746_52038978_52040650_52040852_52042104_52042340_52068019_52068164_52068766
transcript_42540.known	chr14	+	7007	8	FSM	ENSG00000087302.9	ENST00000261700.8	7007	8	0	0	0	0	multi-exon	FALSE	canonical	3	2201	junction_3	113.525866871738	10911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTCTTTTCCTAG	-10	True	NA	NA	False	AATAAA	-21	NA	51989545	52010694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004193_52004243_52004361
transcript_42541.known	chr14	+	851	8	FSM	ENSG00000087302.9	ENST00000556760.5	851	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	842.518503400031	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTATTGCTTTTTTCTT	-3	True	NA	2	True	NA	NA	NA	51989614	52004653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004239_52004243_52004361
transcript_42542.known	chr14	+	2458	2	FSM	ENSG00000125384.7	ENST00000245457.6	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATGGAGTAGTATT	2	True	NA	NA	False	AATAAA	-15	NA	52314311	52328598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52315392_52327220
transcript_42543.known	chr14	-	4557	21	FSM	ENSG00000087301.9	ENST00000281741.9	4557	21	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_16	14.4681546853771	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAAGCCTCCTTTAG	17	True	NA	-14	True	AATAAA	-20	NA	52552505	52430595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52432588_52439203_52439395_52440563_52440725_52455323_52455463_52457089_52457175_52470036_52470174_52470511_52470681_52482229_52482290_52482821_52482966_52488362_52488487_52490390_52490452_52490838_52491006_52511239_52511391_52514879_52514971_52519171_52519294_52536718_52536794_52537598_52537673_52542370_52542454_52543397_52543631_52544263_52544372_52552315
transcript_42546.nic	chr14	-	346	2	ISM	ENSG00000087301.9	ENST00000281741.9	4557	21	-85	113705	-68	-55938	5prime_fragment	FALSE	canonical	3	150	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAATTAACAGCAGATA	NA	False	NA	NA	False	AATAGA	-4	NA	52552590	52544300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_52544372_52552315
transcript_42547.known	chr14	-	5139	16	FSM	ENSG00000197930.13	ENST00000395686.8	5139	16	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_4	34.8950171546343	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTGTGGTTTTTGGT	-3	True	NA	0	True	AATAAA	-18	NA	52695558	52639914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123_52658151_52661292_52661305_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
transcript_4255.nnic	chr1	-	1236	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20715	0	intron_retention	FALSE	canonical	0	0	junction_9	462.507444050871	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-87	True	NA	NA	NA	43193285	43164345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172285_43193233
transcript_42555.known	chr14	+	2163	14	FSM	ENSG00000100519.12	ENST00000445930.7	2163	14	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_4	76.752888656778	2794	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGGAATCATCATTGG	-7	True	NA	NA	False	AATAAA	-16	NA	52707199	52728590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
transcript_42557.known	chr14	+	4554	12	FSM	ENSG00000198252.12	ENST00000442123.6	4554	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	132.387422937627	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGGTGGTTGTATTA	-18	True	NA	-14	True	ATTAAA	-11	NA	52730179	52774941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52730211_52730458_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_42561.known	chr14	+	4864	11	FSM	ENSG00000198252.12	ENST00000354586.5	4864	11	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_7	34.580341236026	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAAAGCTCATTCATA	-32	True	NA	34	True	ATTAAA	-27	NA	52730165	52774989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_42581.nnic	chr14	-	2327	7	NNC	ENSG00000100522.10	novel	785	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	195.285830401377	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-20	True	NA	-23	True	AATAAA	-18	NA	52791668	52775192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_52775942_52777542_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_42583.known	chr14	-	2317	7	FSM	ENSG00000100522.10	ENST00000650397.1	2317	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.663204200024	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGAGCTCAAGTGATC	-2	True	NA	NA	False	NA	NA	NA	52791483	52775687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52775947_52776867_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784655_52791427
transcript_42585.known	chr14	-	785	7	FSM	ENSG00000100522.10	ENST00000557604.1	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	231.274488192902	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAAGTTTGGATATA	-20	True	NA	NA	False	NA	NA	NA	52791668	52778374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52787832_52787872_52791427
transcript_42592.known	chr14	-	3867	6	FSM	ENSG00000100522.10	ENST00000216410.8	3867	6	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_4	40.7754828297594	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	41	True	NA	-23	True	AATAAA	-18	NA	52791607	52775192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_42601.known	chr14	-	3247	16	FSM	ENSG00000073712.15	ENST00000343279.8	3247	16	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_13	52.3949106943286	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATTTTTGTACTTG	247	False	NA	-9	True	AATAAA	-17	NA	52950992	52857274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_42602.known	chr14	-	3286	15	FSM	ENSG00000073712.15	ENST00000341590.8	3286	15	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	124.994203947256	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTACTTGTT	3	True	NA	-7	True	AATAAA	-19	NA	52951050	52857272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_42605.known	chr14	+	1433	1	FSM	ENSG00000288045.1	ENST00000657782.1	1433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACGGAAGTTTTTTCT	NA	False	NA	NA	False	AATACA	-31	NA	52951431	52952864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52951400_52952900
transcript_42606.known	chr14	-	587	4	FSM	ENSG00000073712.15	ENST00000554712.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	240.072674181984	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGATGACCAGTCTGAA	NA	False	NA	NA	False	AAAAAG	-5	NA	52952435	52893358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52893428_52919122_52919357_52950411_52950578_52952317
transcript_42608.known	chr14	-	698	2	FSM	ENSG00000100523.16	ENST00000557445.1	698	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAATCTTTAATT	850	False	NA	NA	False	NA	NA	NA	53152400	53103298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53103857_53152260
transcript_42619.known	chr14	-	1931	4	FSM	ENSG00000125378.16	ENST00000245451.9	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	10.4986771653491	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-1	True	NA	-2	True	AATAAA	-25	NA	53956825	53949735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956549
transcript_42620.known	chr14	-	1708	4	FSM	ENSG00000125378.16	ENST00000559087.5	1708	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	11.115554667022	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	1958	False	NA	-2	True	AATAAA	-25	NA	53956811	53949735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956758
transcript_42623.known	chr14	-	1705	3	FSM	ENSG00000125378.16	ENST00000558984.1	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	10	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCATGATTTTTTTTT	5314	False	NA	-7	True	AATAAA	-20	NA	53953455	53949740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53950889_53951852_53952230_53953275
transcript_42625.known	chr14	-	895	1	FSM	ENSG00000224004.2	ENST00000441945.2	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATCAAGTTCCATCC	NA	False	NA	NA	False	NA	NA	NA	53991995	53991100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53991100_53992000
transcript_42629.known	chr14	+	874	9	NNC	ENSG00000100526.21	novel	938	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	337.059689632267	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCGTTGTGTCTCTTT	0	True	NA	12	True	NA	NA	NA	54396954	54420214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411686_54412834_54412841_54415898_54415931_54417847_54417952_54419991
transcript_42630.known	chr14	+	938	9	FSM	ENSG00000100526.21	ENST00000556102.6	938	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	328.849889767353	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	10	True	NA	16	True	NA	NA	NA	54397002	54420218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213_54418307_54419991
transcript_42635.known	chr14	+	841	8	FSM	ENSG00000100526.21	ENST00000335183.11	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_1	49.2034510155206	3160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	14	True	NA	16	True	NA	NA	NA	54397006	54420218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_42637.nic	chr14	+	842	7	NIC	ENSG00000100526.21	novel	841	8	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	254.572026481047	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	NA	False	NA	16	True	NA	NA	NA	54396922	54420218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_42641.known	chr14	+	727	7	FSM	ENSG00000100526.21	ENST00000442975.6	727	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	281.801003467971	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTCGTTGTGTCTCT	2	True	NA	10	True	NA	NA	NA	54396994	54420212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54399893_54399913_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_42646.known	chr14	+	1070	6	FSM	ENSG00000100526.21	ENST00000541304.5	1070	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	313.751111551816	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTCAGCATGTCTTTTG	-8	True	NA	NA	False	NA	NA	NA	54397028	54414219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54413605
transcript_42651.known	chr14	+	689	6	FSM	ENSG00000100526.21	ENST00000555837.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	273.945542033449	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGGTGGGCGGTGCT	NA	False	NA	NA	False	AATACA	-11	NA	54396848	54417951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847
transcript_42656.known	chr14	+	712	7	FSM	ENSG00000100526.21	ENST00000556305.1	712	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	287.800664040621	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGCTAATTATCCTTT	2889	False	NA	NA	False	AATAAA	-34	NA	54399925	54418414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213
transcript_42657.known	chr14	-	787	6	FSM	ENSG00000100528.12	ENST00000554683.1	787	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	344.442506087736	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAATATAAAATGATTA	16	True	NA	NA	False	GATAAA	-23	NA	54441344	54427594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54436669_54436786_54441246
transcript_42659.known	chr14	-	4735	5	FSM	ENSG00000100528.12	ENST00000216416.9	4735	5	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_1	42.1040378111174	2220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTAGTTTATGCAT	-14	True	NA	-20	True	AATAAA	-17	NA	54441374	54423560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54441246
transcript_42660.known	chr14	-	1233	4	FSM	ENSG00000100528.12	ENST00000395573.8	1233	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	350.314461908472	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCACTTTCAGTGCAT	-31	True	NA	-18	True	AATAAA	-12	NA	54441391	54426935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54427842_54432107_54432221_54436368_54436438_54441246
transcript_42661.known	chr14	-	856	4	FSM	ENSG00000100528.12	ENST00000557659.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	327.667853507515	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGATGATTATATATGGATA	-16	True	NA	-74	True	NA	NA	NA	54441376	54427328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54427842_54430260_54430405_54436368_54436438_54441246
transcript_42665.known	chr14	-	4125	7	FSM	ENSG00000197045.13	ENST00000616146.4	4125	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	398.317468303306	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTTCCAGCTTTTCT	-4	True	NA	-30	True	AATAAA	-12	NA	54489026	54474490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54478160_54479785_54479860_54480873_54480956_54481407_54481459_54482152_54482203_54483670_54483768_54488924
transcript_42669.known	chr14	-	639	6	FSM	ENSG00000197045.13	ENST00000628554.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	539.180340887907	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGACTTTTTGCACTC	7	True	NA	NA	False	NA	NA	NA	54488957	54477857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54478160_54479785_54479860_54480873_54480957_54481408_54481459_54483670_54483768_54488924
transcript_42675.known	chr14	-	6721	4	FSM	ENSG00000197045.13	ENST00000554908.5	6721	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	490.025169421599	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTTTTCTTTTTTTA	-3	True	NA	-23	True	AATAAA	-19	NA	54489025	54474483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54480957_54481408_54481459_54483670_54483768_54488924
transcript_42680.known	chr14	-	710	2	FSM	ENSG00000197045.13	ENST00000553952.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	1040	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTTGTATTCATAGGC	28	False	NA	NA	False	NA	NA	NA	54488994	54483127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54483768_54488924
transcript_42690.known	chr14	+	1962	6	FSM	ENSG00000100532.13	ENST00000216420.12	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	20.519259245889	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTCATCCATTGT	-16	True	NA	15	True	AATAAA	-25	NA	54509905	54539292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_42696.known	chr14	+	1937	6	FSM	ENSG00000100532.13	ENST00000679442.1	1937	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	75.0269284990396	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAGCAGAATGTGATCT	-17	True	NA	NA	False	ATTAAA	-29	NA	54509904	54539087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530406_54530902_54531051_54537721_54537830_54538062
transcript_42698.known	chr14	+	1827	6	FSM	ENSG00000100532.13	ENST00000556216.5	1827	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	86.636251073093	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGAGTTTGGCCTTTTA	-20	True	NA	23	True	CATAAA	-25	NA	54509901	54538616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530764_54530902_54531051_54537721_54537830_54538062
transcript_42705.known	chr14	+	622	5	FSM	ENSG00000100532.13	ENST00000557755.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	115.361117799716	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACAATTCCTCTTCAGA	-10	True	NA	NA	False	NA	NA	NA	54509911	54538098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_42710.known	chr14	+	719	4	FSM	ENSG00000100532.13	ENST00000554791.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	123.002258335185	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCAGCAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	54509811	54538281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54522453_54522594_54537721_54537830_54538062
transcript_42713.known	chr14	+	590	2	FSM	ENSG00000020577.14	ENST00000673833.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCATGATGTTTCGCGA	-10	True	NA	NA	False	GGGGCT	-22	NA	54567135	54567910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54567311_54567495
transcript_42714.known	chr14	-	1977	7	FSM	ENSG00000131979.20	ENST00000395514.5	1977	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.3575377028545	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTTTCTTTTTCAAC	0	True	NA	-4	True	ATTAAA	-23	NA	54902824	54842007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54843055_54844000_54844144_54845767_54845853_54847098_54847131_54859680_54859737_54865326_54865437_54902320
transcript_42716.known	chr14	-	6019	26	FSM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	108.420485149256	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCCATAATTACTC	-24	True	NA	-16	True	AATAAA	-18	NA	55027099	54938948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_42720.known	chr14	-	3722	25	FSM	ENSG00000198554.12	ENST00000420358.2	3722	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	138.385532320238	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	-30	True	NA	-18	True	ATTAAA	-29	NA	55027105	54941158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55027027
transcript_42736.nnic	chr14	+	501	3	NNC	ENSG00000180008.9	novel	6903	3	NA	NA	-46	3948	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATATGGCTATGATT	21	False	NA	NA	False	AATAAA	-25	NA	55027183	55035942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55027472_55031862_55031992_55035858
transcript_42737.nnic	chr14	+	594	3	NNC	ENSG00000180008.9	novel	6903	3	NA	NA	-46	4041	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTCTAATGCCTGCC	21	False	NA	NA	False	ATTAAA	-27	NA	55027183	55036035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55027472_55031862_55031992_55035858
transcript_42738.known	chr14	+	6903	3	FSM	ENSG00000180008.9	ENST00000555846.2	6903	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	12	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGTTTTATTTTAA	-13	True	NA	17	True	ATTAAA	-22	NA	55027235	55049489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55027472_55031862_55031992_55042951
transcript_42759.known	chr14	+	6779	2	FSM	ENSG00000180008.9	ENST00000395472.2	6779	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTGTTTTATTTTA	-19	True	NA	16	True	ATTAAA	-21	NA	55027229	55049488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55027472_55042951
transcript_42765.known	chr14	+	6667	2	FSM	ENSG00000180008.9	ENST00000339298.2	6667	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGTGTTTTATTT	18	False	NA	14	True	ATTAAA	-19	NA	55027626	55049486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55027759_55042951
transcript_42774.known	chr14	+	6466	4	FSM	ENSG00000168175.15	ENST00000395468.9	6466	4	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	85.8305824801911	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTCTTTTTTTCCTG	-26	True	NA	NA	False	NA	NA	NA	55051646	55070194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615
transcript_42784.nnic	chr14	+	999	2	NNC	ENSG00000168175.15	novel	565	2	NA	NA	-9	-5750	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTTGAGTATAAATTGT	NA	False	NA	NA	False	AAAAAG	-15	NA	55051637	55055032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55051804_55054199
transcript_42785.known	chr14	+	565	2	FSM	ENSG00000168175.15	ENST00000554364.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCATGGGGATCCATGTC	-26	True	NA	NA	False	NA	NA	NA	55051646	55063025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55051804_55062617
transcript_42786.known	chr14	+	2836	5	FSM	ENSG00000168175.15	ENST00000622254.1	2836	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	412.769533153793	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGGAAACTTTTTTTA	10	True	NA	13	True	GATAAA	-21	NA	55051682	55069502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615_55066207_55069108
transcript_42789.known	chr14	+	958	6	FSM	ENSG00000131981.16	ENST00000254301.14	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	10.5375518978556	1457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCATTTAATTGGAGTG	1	True	NA	19	True	AATAAA	-26	NA	55129251	55145423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55129301_55137369_55137392_55138044_55138369_55140274_55140364_55142583_55142750_55145115
transcript_42797.known	chr14	-	2881	19	FSM	ENSG00000126787.13	ENST00000247191.7	2881	19	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_6	116.728502131555	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTCTCTTGTTTAAA	-17	True	NA	-11	True	AATAAA	-13	NA	55191585	55148134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55148474_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_42798.known	chr14	-	2954	20	FSM	ENSG00000126787.13	ENST00000395425.6	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	324.359133747501	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCTTAAGGCTAAGTA	24	True	NA	12	True	AATAAA	-36	NA	55191544	55148111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55148474_55148593_55148685_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_42805.nnic	chr14	+	237	2	Antisense	novelGene_ENSG00000258050.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTAAGAAAGTAAGTTAA	NA	False	NA	NA	False	NA	NA	NA	55191715	55200219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_55191803_55200069
transcript_42807.known	chr14	-	4715	10	FSM	ENSG00000126775.9	ENST00000247178.6	4715	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	9.91071249821234	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCATGTGTATGTCT	0	True	NA	-5	True	AATAAA	-14	NA	55411830	55366390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
transcript_42813.nic	chr14	-	415	4	ISM	ENSG00000126775.9	ENST00000247178.6	4715	10	-20	24542	-20	-24541	5prime_fragment	FALSE	canonical	3	48	junction_1	9.0921211313239	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAATGAAGAAATGGAGAA	61	False	NA	NA	False	AAAACA	-14	NA	55411850	55390932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_55390993_55395939_55395983_55397371_55397435_55411601
transcript_42814.nic	chr14	-	2281	3	ISM	ENSG00000126775.9	ENST00000247178.6	4715	10	-20	27623	-20	-27622	5prime_fragment	FALSE	canonical	3	62	junction_1	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTATGATACTGT	61	False	NA	NA	False	NA	NA	NA	55411850	55394013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_55395983_55397371_55397435_55411601
transcript_42821.known	chr14	+	4728	44	FSM	ENSG00000126777.18	ENST00000395314.8	4728	44	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_39	199.320286292823	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	-19	True	NA	31	True	AATAAA	-20	NA	55580206	55684579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55684098
transcript_42833.nic	chr14	-	393	3	ISM	ENSG00000186615.12	ENST00000412224.6	2185	4	-48	3154	-15	-3140	5prime_fragment	FALSE	canonical	1	4	junction_1	9.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAAATGGATGCAAG	97	False	NA	NA	False	NA	NA	NA	55580158	55561125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_55561164_55578605_55578738_55579935
transcript_42836.known	chr14	-	1465	3	FSM	ENSG00000186615.12	ENST00000335142.6	1534	3	69	0	22	0	multi-exon	FALSE	canonical	3	23	junction_2	1	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATTAAAATGTGAAT	181	False	NA	-36	True	NA	NA	NA	55580074	55576185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55577380_55578605_55578738_55579935
transcript_42837.known	chr14	-	415	3	FSM	ENSG00000186615.12	ENST00000663686.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCCACTCATTGCGTG	NA	False	NA	-8	True	ATTAAA	-14	NA	55580888	55577139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55577380_55578605_55578738_55580845
transcript_42841.known	chr14	+	3234	4	FSM	ENSG00000259868.3	ENST00000662992.1	3234	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.62466929133727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTAAGGTGTTT	NA	False	NA	4	True	AATAAA	-18	NA	55955288	55962967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55958167_55961980_55962088_55962171_55962278_55962824
transcript_42842.nnic	chr14	+	536	4	NNC	ENSG00000259868.3	novel	955	2	NA	NA	1699	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	7.58653778449403	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTAAGGTGTTTTGT	NA	False	NA	7	True	AATAAA	-21	NA	55958181	55962970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55958359_55961980_55962088_55962171_55962278_55962824
transcript_42843.known	chr14	+	2217	3	FSM	ENSG00000259868.3	ENST00000668222.1	2217	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCTATTATTTACAAA	NA	False	NA	-16	True	NA	NA	NA	55956179	55962947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55958167_55961980_55962088_55962824
transcript_42844.nnic	chr14	+	430	3	NNC	ENSG00000259868.3	novel	955	2	NA	NA	1699	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTAAGGTGTTTTGT	NA	False	NA	7	True	AATAAA	-21	NA	55958181	55962970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55958359_55961980_55962088_55962824
transcript_42846.nnic	chr14	+	1453	3	Antisense	novelGene_ENSG00000259133.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACTGTATTTGTCACTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	56659406	56663165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_56659993_56660538_56660630_56662389
transcript_42854.known	chr14	-	835	2	FSM	ENSG00000165588.19	ENST00000554788.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCTTAACTTCAATGC	6556	False	NA	NA	False	NA	NA	NA	56805648	56801809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56805359
transcript_42855.known	chr14	-	2109	3	FSM	ENSG00000165588.19	ENST00000408990.8	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	863	junction_2	77	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-5	True	NA	-15	True	ATTAAA	-16	NA	56805667	56800706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56804187_56804340_56805359
transcript_42856.known	chr14	-	2154	5	FSM	ENSG00000165588.19	ENST00000673035.1	2154	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	456.664195552925	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTATAATTATATTAAAA	79	False	NA	3	True	CATAAA	-25	NA	56816693	56800740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56816586
transcript_42857.known	chr14	-	2956	5	FSM	ENSG00000165588.19	ENST00000339475.10	2956	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	441.887711981223	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-1	True	NA	-3	True	AATGAA	-19	NA	56810448	56799904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56810375
transcript_42858.known	chr14	-	2240	4	FSM	ENSG00000165588.19	ENST00000673481.1	2240	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	425.090055818241	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATAATTATATTAAAATG	0	True	NA	5	True	CATAAA	-27	NA	56810389	56800738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56804187_56804364_56805359_56805576_56810158
transcript_42861.known	chr14	-	624	2	FSM	ENSG00000258592.1	ENST00000551408.2	624	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACCCTTGGGAAGGATA	NA	False	NA	NA	False	NA	NA	NA	57112660	57067007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57067166_57112194
transcript_42865.known	chr14	-	10486	18	FSM	ENSG00000070367.16	ENST00000621441.5	10486	18	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_5	53.4762502664552	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAATTGTTGTTTTTG	-40	True	NA	-4	True	AATAAA	-18	NA	57268905	57200506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_42867.known	chr14	-	2632	17	FSM	ENSG00000070367.16	ENST00000340918.11	2632	17	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_14	121.061709470831	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGCATCAATTGTTAATC	-34	True	NA	NA	False	AATACA	-41	NA	57268899	57208159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57246710_57246859_57247617_57247713_57268621
transcript_42871.nic	chr14	-	1874	6	ISM	ENSG00000070367.16	ENST00000621441.5	10486	18	-3	35776	-3	3245	5prime_fragment	FALSE	canonical	3	417	junction_2	48.1389655061261	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAAAAATATAAATACTG	-43	True	NA	NA	False	AAAAAG	-5	NA	57268908	57236282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_42874.known	chr14	-	772	5	FSM	ENSG00000070367.16	ENST00000554598.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	50.0949099210688	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATGATTTTCTTTGCC	42	True	NA	NA	False	AATAAA	-13	NA	57268823	57239527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_42876.known	chr14	-	594	4	FSM	ENSG00000070367.16	ENST00000555749.5	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_2	36.7544403968948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGAGCTGCAATAATT	6654	False	NA	NA	False	GATAAA	-31	NA	57268725	57244112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57244360_57246710_57246859_57247617_57247713_57268621
transcript_42878.known	chr14	+	1815	9	FSM	ENSG00000053770.12	ENST00000431972.6	1815	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	111.034622978601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCATAATCTTAT	-7	True	NA	NA	False	TTTAAA	-26	NA	57269055	57288925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57269389_57273708_57273751_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_42881.nnic	chr14	+	3336	8	NNC	ENSG00000053770.12	novel	11675	8	NA	NA	-359	-5	intron_retention	FALSE	canonical	3	30	junction_2	89.4281150148097	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTATATCTTGGGTTC	-20	True	NA	10	True	ATTAAA	-14	NA	57268564	57290069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_57269389_57274243_57274818_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_42882.known	chr14	+	11675	8	FSM	ENSG00000053770.12	ENST00000261558.8	11675	8	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	31.9948975523872	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTAAGTGTTTTATA	0	True	NA	7	True	AATAAA	-17	NA	57268970	57298742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57269389_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_42896.known	chr14	+	1691	2	FSM	ENSG00000053770.12	ENST00000554931.1	1691	2	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGGAGAGAGACAGGC	-1	True	NA	NA	False	NA	NA	NA	57268923	57275469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57269389_57274243
transcript_42900.known	chr14	+	610	2	FSM	ENSG00000053770.12	ENST00000556995.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATCTGTGACTCAGC	15	False	NA	NA	False	NA	NA	NA	57268939	57274723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57269070_57274243
transcript_42904.known	chr14	+	1294	4	FSM	ENSG00000139977.14	ENST00000555166.5	1294	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	105.607238809131	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAAGAGATAAGAAAAG	NA	False	NA	NA	False	NA	NA	NA	57390543	57410330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57390706_57396751_57396876_57399827_57399884_57409378
transcript_42908.known	chr14	+	7600	5	FSM	ENSG00000139977.14	ENST00000556492.6	7600	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	18.6077940659284	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGACTTAACTAGGTAAA	-9	True	NA	11	True	AATAAA	-24	NA	57390585	57415906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57390706_57390956_57391729_57396751_57396876_57399827_57399884_57409378
transcript_42909.known	chr14	-	981	1	FSM	ENSG00000259969.1	ENST00000563647.1	981	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGCACAAGACCTGTT	NA	False	NA	-47	True	ATTAAA	-21	NA	57994525	57993544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57993500_57994500
transcript_42910.known	chr14	-	6495	8	FSM	ENSG00000139971.15	ENST00000267485.7	6495	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	11.7438650940369	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGGGCCTGGTAGCGC	-14	True	NA	NA	False	AATACA	-6	NA	58152213	58000760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58004805_58005047_58005183_58012118_58012151_58096723_58096982_58131511_58131722_58133089_58133342_58137989_58139415_58152074
transcript_42919.nnic	chr14	-	2299	3	NIC	ENSG00000257621.9	novel	2475	5	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	59.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGGGATTTATTG	NA	False	NA	-12	True	ATTAAA	-19	NA	58298151	58265364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_58267394_58291634_58291708_58297954
transcript_42920.nnic	chr14	-	665	3	NIC	ENSG00000257621.9	novel	903	4	NA	NA	-17	-14	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	59.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATACGCCAAAAAAGATA	NA	False	NA	NA	False	AAAAAG	-14	NA	58298151	58266998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_58267394_58291634_58291708_58297954
transcript_42925.known	chr14	+	540	4	FSM	ENSG00000131966.14	ENST00000556312.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_3	17.2111075245674	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGTATGGCACACAG	24	True	NA	NA	False	AATAAA	-18	NA	58200169	58209257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998
transcript_42926.known	chr14	+	2408	13	FSM	ENSG00000131966.14	ENST00000254286.9	2408	13	0	0	0	0	multi-exon	TRUE	non_canonical	2	206	junction_5	67.9362446219493	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTCATTCTTT	3	True	NA	16	True	AATGAA	-17	NA	58200148	58235636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_42927.known	chr14	+	1544	14	FSM	ENSG00000131966.14	ENST00000554402.6	1544	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	144.61202942098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAGTATAGTAAAG	22	False	NA	-8	True	NA	NA	NA	58200218	58234768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58231079_58231154_58232065_58232268_58234369
transcript_42936.known	chr14	+	814	10	FSM	ENSG00000100567.13	ENST00000557508.5	814	10	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_1	830.074427720524	2204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTTTGGTTAATATCT	38	True	NA	29	True	ATTAAA	-18	NA	58244903	58272007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_4295.known	chr1	-	1352	9	FSM	ENSG00000117395.13	ENST00000236051.3	1352	9	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_6	80.4794228359026	3340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCTCATTTCCTTTGT	-5	True	NA	-9	True	GATAAA	-16	NA	43172290	43164183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052
transcript_4296.known	chr1	-	1503	10	FSM	ENSG00000117395.13	ENST00000431635.6	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	449.492168871209	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTTGTCTCATCCTT	NA	False	NA	0	True	GATAAA	-25	NA	43172570	43164174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172142_43172279
transcript_4297.known	chr1	-	300	3	FSM	ENSG00000117395.13	ENST00000466927.5	300	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAAGAACTTTGCGCTT	9042	False	NA	NA	False	AATAAA	-23	NA	43261910	43181681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43181785_43215265_43215394_43261841
transcript_42987.known	chr14	-	1039	4	FSM	ENSG00000257621.9	ENST00000556002.5	1039	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	34.6538437823121	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTAAGCATTCTTTC	23	False	NA	NA	False	NA	NA	NA	58298102	58266607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58267394_58273978_58274011_58291634_58291708_58297954
transcript_42988.known	chr14	-	903	4	FSM	ENSG00000257621.9	ENST00000555275.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	38.9643711898732	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGACTGGTGAAGACATC	3	True	NA	NA	False	TATAAA	-43	NA	58298122	58266888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58267394_58273978_58274136_58291634_58291708_58297954
transcript_4299.nnic	chr1	+	850	4	NNC	ENSG00000179178.11	novel	1850	4	NA	NA	-319	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	70.7530918052349	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	0	True	NA	28	True	AATAAA	-29	NA	43270626	43274002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_43270794_43272183_43272340_43273285_43273444_43273633
transcript_42999.known	chr14	-	398	4	FSM	ENSG00000257621.9	ENST00000553657.5	398	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	9.7410927974683	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTACCAGCATCAAGATG	41	False	NA	-101	True	TTTAAA	-25	NA	58298084	58274013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58274136_58291634_58291708_58293065_58293139_58297954
transcript_4300.nnic	chr1	+	692	3	NNC	ENSG00000179178.11	novel	1850	4	NA	NA	-319	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	76.5	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	0	True	NA	28	True	AATAAA	-29	NA	43270626	43274002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_43270794_43272183_43272340_43273633
transcript_43013.known	chr14	-	1983	3	FSM	ENSG00000257621.9	ENST00000555707.5	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	46	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGACTCATGTATTG	-4	True	NA	NA	False	AATAAA	-16	NA	58298129	58272400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58274136_58291634_58291708_58297954
transcript_43015.known	chr14	-	604	3	FSM	ENSG00000257621.9	ENST00000556400.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	39	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAGGCAGGAGACTC	10	True	NA	NA	False	NA	NA	NA	58298115	58273640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58274011_58291634_58291708_58297954
transcript_43016.known	chr14	+	435	2	FSM	ENSG00000100567.13	ENST00000554456.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGAATCCTTCAGTT	8	True	NA	2	True	AATAAA	-17	NA	58244873	58245478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58245111
transcript_43017.known	chr14	+	955	11	FSM	ENSG00000100567.13	ENST00000216455.9	955	11	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_10	227.092161907891	28220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	-23	True	NA	26	True	ATTAAA	-15	NA	58244842	58272004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_43018.known	chr14	+	925	5	FSM	ENSG00000100567.13	ENST00000553665.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	2522	junction_3	260.745445789567	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTTTCAATAGT	-10	True	NA	NA	False	AATAGA	-33	NA	58244855	58258454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924
transcript_43019.known	chr14	+	908	11	FSM	ENSG00000100567.13	ENST00000412908.6	908	11	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_5	841.219329307167	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTAATATCTGCTTT	11	True	NA	34	True	ATTAAA	-23	NA	58244876	58272012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260968_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_43020.known	chr14	-	2360	4	FSM	ENSG00000257621.9	ENST00000557660.5	2360	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	18.8030730348939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTACCAGCTTTTTTT	5	True	NA	-23	True	AATAAA	-19	NA	58298120	58273935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58274011_58291634_58291708_58293765_58295812_58297954
transcript_43021.known	chr14	+	640	8	FSM	ENSG00000100567.13	ENST00000555743.1	640	8	0	0	0	0	multi-exon	FALSE	canonical	3	2511	junction_6	232.853637133996	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTCTTACCATCCAC	13	True	NA	NA	False	NA	NA	NA	58244878	58267528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473
transcript_43028.nic	chr14	+	1828	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-176	21108	-124	-8054	5prime_fragment	FALSE	canonical	3	27	junction_7	9.09798512492372	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGAAGAAGAGAAAACAGAA	NA	False	NA	NA	False	ATTAAA	-8	NA	58298379	58351118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_43029.nic	chr14	+	1962	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-176	20974	-124	-7920	5prime_fragment	FALSE	canonical	3	27	junction_7	9.09798512492372	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAGAAAATTAAAAAACA	NA	False	NA	NA	False	AATACA	-13	NA	58298379	58351252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_43030.nic	chr14	+	1632	15	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-176	24498	-124	-11444	5prime_fragment	FALSE	canonical	3	27	junction_7	9.33831256880241	107	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAAAAGACTTAGA	NA	False	NA	NA	False	AGTAAA	-2	NA	58298379	58347728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646
transcript_43037.nic	chr14	+	1946	10	ISM	ENSG00000100578.18	ENST00000650845.1	6431	29	-45	65444	-10	-475	5prime_fragment	FALSE	canonical	3	50	junction_1	7.16645133182093	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCCAGGTAAAGTGGGAAT	243	False	NA	NA	False	AAAAAG	-20	NA	58427673	58456803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701
transcript_4304.known	chr1	-	629	3	FSM	ENSG00000253313.6	ENST00000423420.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	54.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACCCCACTTCCCTGA	-4	True	NA	NA	False	GGGGCT	-21	NA	43285617	43282660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43283108_43283251_43283369_43285552
transcript_43042.nic	chr14	+	1697	8	ISM	ENSG00000100578.18	ENST00000650845.1	6431	29	-45	71524	-10	2232	5prime_fragment	FALSE	canonical	3	50	junction_1	6.66394502268034	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAAGTGTCGTGTCACA	243	False	NA	NA	False	AAAAAG	-5	NA	58427673	58450723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578
transcript_43048.known	chr14	-	1252	6	FSM	ENSG00000100575.14	ENST00000395159.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	78.6318001828777	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATGCATGATCCTTTT	-5	True	NA	-6	True	CATAAA	-19	NA	58427531	58408494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053_58427243_58427391
transcript_43051.known	chr14	+	607	5	FSM	ENSG00000196860.8	ENST00000360945.7	607	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGATCGAACACATAAGTT	1	True	NA	NA	False	AATAAA	-18	NA	58395929	58408702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58396094_58396297_58396342_58402679_58402762_58407325_58407469_58408528
transcript_4306.known	chr1	-	1486	3	FSM	ENSG00000253313.6	ENST00000523677.6	1486	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	3	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCACTCATTTTTATTT	0	True	NA	-16	True	AATAAA	-30	NA	43285581	43281876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43283108_43283251_43283369_43285443
transcript_43062.known	chr14	-	796	4	FSM	ENSG00000100575.14	ENST00000555593.5	796	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	99.079092984679	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTTTATACTGTATG	138	False	NA	-29	True	AATAAA	-16	NA	58427505	58408647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58427391
transcript_43064.known	chr14	-	571	3	FSM	ENSG00000100575.14	ENST00000557397.5	571	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	107	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAGGCCTTATGATT	11	True	NA	-89	True	AATAGA	-37	NA	58427171	58408811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58409169_58410842_58410939_58427053
transcript_43065.known	chr14	+	376	1	FSM	ENSG00000213598.4	ENST00000480540.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2385	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGATCGTCAGATACAT	22	False	NA	NA	False	NA	NA	NA	58794653	58795029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58794700_58795000
transcript_43067.known	chr14	+	5890	25	FSM	ENSG00000100592.16	ENST00000360909.8	5890	25	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_14	13.5968107984516	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCTTTCTATGAAT	-29	True	NA	22	True	AATAAA	-22	NA	59188666	59371403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428_59367600_59368649
transcript_43070.nic	chr14	+	1587	13	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-53	40880	-32	4408	5prime_fragment	FALSE	canonical	3	107	junction_8	12.2938557372734	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGGAAAAGAAAGAACGAGA	NA	False	NA	8	True	NA	NA	NA	59188613	59330523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500
transcript_43072.nic	chr14	+	1555	12	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-53	44421	-32	867	5prime_fragment	FALSE	canonical	3	107	junction_8	12.4615109917837	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAGGTAAATAATGA	NA	False	NA	NA	False	AATGAA	-38	NA	59188613	59326982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932
transcript_43075.nic	chr14	+	537	4	ISM	ENSG00000100592.16	ENST00000360909.8	5890	25	-53	56052	-32	-7706	5prime_fragment	FALSE	canonical	3	123	junction_3	5.43650214343336	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAGACTTTTATGTTC	NA	False	NA	NA	False	NA	NA	NA	59188613	59315351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279
transcript_43077.known	chr14	+	2524	8	FSM	ENSG00000050130.18	ENST00000356057.9	2524	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	284.656040203769	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCCTCAATTGAGTA	257	False	NA	69	True	ATTAAA	-15	NA	59484442	59505404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59484594_59484989_59485117_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_4308.known	chr1	+	3893	23	FSM	ENSG00000066056.14	ENST00000372476.8	3893	23	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	3.03594172354483	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATGTCTACCTTTTACT	-2	True	NA	5	True	AATAAA	-18	NA	43300981	43323108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43301130_43304850_43305166_43305232_43305344_43306839_43306996_43307141_43307274_43307431_43307573_43307795_43307925_43308985_43309132_43309387_43309533_43311670_43311830_43311993_43312132_43312304_43312602_43313134_43313426_43313777_43313969_43317198_43317410_43317563_43317675_43317881_43318073_43319234_43319349_43319458_43319530_43321268_43321310_43321395_43321493_43321615_43321716_43322650
transcript_43081.known	chr14	+	1191	7	FSM	ENSG00000050130.18	ENST00000553941.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	237.317941916652	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAATATTATCTGCTACA	45	False	NA	NA	False	NA	NA	NA	59484568	59504274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59484594_59486680_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43086.known	chr14	+	2137	7	FSM	ENSG00000050130.18	ENST00000554271.5	2137	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	238.39509689216	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	21	True	NA	7	True	AATAAA	-15	NA	59484544	59504705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59485117_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_4309.nnic	chr1	-	846	4	NNC	ENSG00000234694.2	novel	679	3	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.942809041582063	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTGTCATCTATTT	9269	False	NA	0	True	NA	NA	NA	43358776	43354683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_43355007_43357802_43357901_43358041_43358109_43358418
transcript_43092.nic	chr14	+	1606	6	NIC	ENSG00000050130.18	novel	1636	7	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_1	231.84788116349	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	275	False	NA	7	True	AATAAA	-15	NA	59484460	59504705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43093.nic	chr14	+	2244	6	NIC	ENSG00000050130.18	novel	2347	7	NA	NA	16	-61	intron_retention	FALSE	canonical	3	74	junction_1	231.84788116349	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGTATTGCACACA	275	False	NA	8	True	AATAAA	-16	NA	59484460	59505343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43099.known	chr14	-	1516	5	FSM	ENSG00000126790.12	ENST00000247194.9	1516	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	27.5227178890458	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACAAGCTCATTATTTT	-1	True	NA	NA	False	ATTAAA	-34	NA	59484408	59472605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483808
transcript_43104.known	chr14	+	2347	7	FSM	ENSG00000050130.18	ENST00000616435.5	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	102.788888288353	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAATTGAGTAATTGTA	-7	True	NA	75	True	ATTAAA	-21	NA	59484516	59505410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59484594_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43105.known	chr14	+	562	4	FSM	ENSG00000050130.18	ENST00000554754.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	287.938650873179	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCGACCTCTTCTGGTGA	259	False	NA	NA	False	NA	NA	NA	59484444	59498777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726
transcript_43106.known	chr14	-	1703	7	FSM	ENSG00000139970.18	ENST00000342503.8	1703	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	8.39477350630868	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTCTCTTCTCATGCA	-1	True	NA	-1	True	AATAAA	-21	NA	59630814	59595976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59630445
transcript_4311.known	chr1	-	661	3	FSM	ENSG00000234694.2	ENST00000424948.2	679	3	18	0	18	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTGTCATCTATTT	9387	False	NA	0	True	NA	NA	NA	43358658	43354683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43355007_43357802_43357901_43358418
transcript_43127.known	chr14	+	18069	11	FSM	ENSG00000126773.13	ENST00000406854.6	18069	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	32.2690253958808	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	-42	True	NA	NA	False	AATAAA	-16	NA	60091922	60148221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60092420_60107585_60108328_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_43128.known	chr14	+	17339	10	FSM	ENSG00000126773.13	ENST00000317623.8	17339	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	22.7351905399732	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	-54	True	NA	NA	False	AATAAA	-16	NA	60091910	60148221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60092420_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_43135.known	chr14	-	1361	6	FSM	ENSG00000100612.14	ENST00000554101.5	1361	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	13.4966662550424	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAATAAATAAAAAA	4610	False	NA	-38	True	NA	NA	NA	60165293	60148947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_43136.known	chr14	-	924	4	FSM	ENSG00000100612.14	ENST00000556502.1	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_1	5.79271573232759	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGATAATAAGATGT	-10	True	NA	NA	False	NA	NA	NA	60165350	60152688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60153179_60153958_60154066_60155999_60156153_60165176
transcript_43137.known	chr14	+	8231	6	FSM	ENSG00000100614.18	ENST00000395076.9	8231	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	11.1175536877498	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTATTTATGATTG	-29	True	NA	NA	False	AATAAA	-16	NA	60249220	60299087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60249678_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
transcript_4314.known	chr1	+	1649	11	FSM	ENSG00000117399.14	ENST00000310955.11	1649	11	0	0	0	0	multi-exon	TRUE	canonical	3	1218	junction_1	223.637228564477	4351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	2	True	NA	55	True	AATAAA	-32	NA	43358980	43363203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43359007_43359166_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_43140.known	chr14	+	338	2	FSM	ENSG00000258556.1	ENST00000554773.1	338	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGGGTCTTGTCAAGAAA	NA	False	NA	NA	False	ATTAAA	-22	NA	60323235	60323907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60323277_60323610
transcript_43142.nic	chr14	-	892	7	ISM	ENSG00000179008.9	ENST00000321731.8	2780	18	-79	35329	-79	347	5prime_fragment	FALSE	canonical	2	8	junction_1	2.40947204913349	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTCATCTTGGAT	5190	False	NA	NA	False	ATTAAA	-16	NA	60486142	60471284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_43146.nic	chr14	-	984	6	NIC	ENSG00000179008.9	novel	2780	18	NA	NA	-79	347	intron_retention	FALSE	canonical	3	9	junction_3	2.13541565040626	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTCATCTTGGAT	5190	False	NA	NA	False	ATTAAA	-16	NA	60486142	60471284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_43147.known	chr14	-	482	5	FSM	ENSG00000179008.9	ENST00000555476.5	482	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.84767985741633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATGAAGAAATTCAAAGCA	1	True	NA	NA	False	AAGAAA	-6	NA	60486044	60471631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485944
transcript_43148.nnic	chr14	-	788	5	NIC	ENSG00000179008.9	novel	2780	18	NA	NA	-10	347	intron_retention	FALSE	canonical	0	0	junction_2	5.87367006223537	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTCATCTTGGAT	5259	False	NA	NA	False	ATTAAA	-16	NA	60486073	60471284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_60471740_60478299_60478390_60484880_60484938_60485029_60485087_60485944
transcript_4315.known	chr1	+	1777	10	FSM	ENSG00000117399.14	ENST00000372462.1	1777	10	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_2	127.287174103906	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	9	False	NA	55	True	AATAAA	-32	NA	43359012	43363203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_43150.known	chr14	-	2780	18	FSM	ENSG00000179008.9	ENST00000321731.8	2780	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.9215295678475	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATGTGACTGTTGA	-18	True	NA	NA	False	AATAAA	-14	NA	60486063	60435955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60437048_60442073_60442132_60455000_60455146_60456916_60457096_60458677_60458740_60461353_60461413_60461507_60461594_60465978_60466056_60466916_60467045_60468444_60468537_60469532_60469654_60471416_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_43151.known	chr14	-	288	1	FSM	ENSG00000244756.1	ENST00000492636.1	288	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAATGATTTGGGTG	NA	False	NA	NA	False	CATAAA	-40	NA	60572311	60572023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60572000_60572300
transcript_43152.known	chr14	-	388	1	FSM	ENSG00000241354.2	ENST00000489560.1	388	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTAATACATGCTTATA	NA	False	NA	NA	False	AAAACA	-35	NA	60602533	60602145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60602100_60602500
transcript_43154.known	chr14	-	6491	3	FSM	ENSG00000100625.9	ENST00000216513.5	6491	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	15	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGCATTGAAAATTATTT	-5	True	NA	-16	True	AATAAA	-18	NA	60724351	60709538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60714204_60719759_60720446_60723211
transcript_4317.known	chr1	-	973	8	FSM	ENSG00000066322.15	ENST00000497050.5	973	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	74.7736721100169	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATGTATGGCACCATC	307	False	NA	NA	False	NA	NA	NA	43367738	43364049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367485
transcript_43178.known	chr14	+	612	2	FSM	ENSG00000020426.11	ENST00000555545.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGCAACTTGCTGTC	-28	True	NA	NA	False	NA	NA	NA	60734741	60753954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60734952_60753552
transcript_4318.known	chr1	-	1466	8	FSM	ENSG00000066322.15	ENST00000372458.8	1466	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	26.1744539736042	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	-17	True	NA	-5	True	ATTAAA	-18	NA	43368011	43363400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_43180.known	chr14	+	2648	8	FSM	ENSG00000020426.11	ENST00000261245.9	2648	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_6	37.7164501543411	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTAGTTGCTATTGC	-9	True	NA	NA	False	AATAAA	-27	NA	60734760	60969965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_43181.known	chr14	+	1220	7	FSM	ENSG00000020426.11	ENST00000539616.6	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	163.191520068361	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTTTCTCT	6	True	NA	11	True	AATAAA	-16	NA	60734775	60968678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60879713_60879836_60968228
transcript_43182.known	chr14	+	277	2	FSM	ENSG00000020426.11	ENST00000553354.5	277	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGTTGCTAAGTATTTTC	9	True	NA	NA	False	AATAAA	-10	NA	60734778	60808428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60734952_60808324
transcript_43183.known	chr14	+	616	5	FSM	ENSG00000020426.11	ENST00000554002.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	180.239424100278	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGGTTTTTCTCTTA	NA	False	NA	13	True	AATAAA	-18	NA	60808323	60968680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968558
transcript_43189.known	chr14	+	1568	17	FSM	ENSG00000139974.16	ENST00000451406.5	1568	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	23.459739448681	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTGTGGTATTTTGT	55	False	NA	6	True	AATAAA	-17	NA	60981292	61083729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61078809_61078928_61083554
transcript_43192.known	chr14	+	1605	16	FSM	ENSG00000139974.16	ENST00000267488.9	1605	16	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_15	12.6325857298584	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGGGTTGATCTTTTG	7	True	NA	NA	False	AAAAAG	-25	NA	60981244	61052630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
transcript_4320.known	chr1	-	828	7	FSM	ENSG00000066322.15	ENST00000487209.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	74.0714744914217	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTGTGACCAAGGCTT	-5	True	NA	NA	False	NA	NA	NA	43367999	43363835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365563_43365624_43367914
transcript_43221.nic	chr14	+	1176	6	ISM	ENSG00000139974.16	ENST00000267488.9	1605	16	-145	21591	-14	0	5prime_fragment	FALSE	canonical	3	65	junction_4	8.55569985448298	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTGTTTCATTTCCTG	NA	False	NA	NA	False	AATAAA	-14	NA	60981099	61031039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444
transcript_43227.known	chr14	+	559	4	FSM	ENSG00000139974.16	ENST00000532148.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	37.4966665185054	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACTGGCATCTAAACACA	-1	True	NA	NA	False	TTTAAA	-21	NA	60981236	61002236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61002028
transcript_43230.known	chr14	+	1734	17	FSM	ENSG00000139974.16	ENST00000529345.6	1734	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.8723835935706	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGGTATTTTGTTGT	206	False	NA	9	True	AATAAA	-20	NA	60981443	61083732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60981692_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61078809_61078928_61083549
transcript_43233.nic	chr14	-	2261	5	NIC	ENSG00000126814.7	novel	5304	5	NA	NA	-497	-3570	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	38.2393776099978	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTACTTTGCCTTATT	12	True	NA	1	True	AATAAA	-29	NA	60981667	60975010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60981023
transcript_43234.known	chr14	-	5304	5	FSM	ENSG00000126814.7	ENST00000261249.7	5304	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	11.7127067751225	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAATTTGTTTTAGC	-13	True	NA	0	True	AATAAA	-30	NA	60981079	60971440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
transcript_43237.known	chr14	-	652	2	FSM	ENSG00000258777.2	ENST00000557544.2	1039	2	69	318	69	-318	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTTCCAACTAAAGAAATA	12	False	NA	NA	False	AAGAAA	-11	NA	61695823	61681040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_61681576_61695706
transcript_43238.known	chr14	+	3922	15	FSM	ENSG00000100644.17	ENST00000394997.5	3922	15	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	213.126339842578	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	18	False	NA	19	True	AATAAA	-19	NA	61695539	61748258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_61695840_61720378_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
transcript_43239.known	chr14	+	2593	10	FSM	ENSG00000023608.5	ENST00000216294.5	2593	10	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	25.8929419812513	792	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGTCACAATTGTT	3	True	NA	13	True	AATAAA	-18	NA	61762419	61796428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246_61782398_61792806_61792903_61794948
transcript_43240.known	chr14	-	533	3	FSM	ENSG00000258667.2	ENST00000554254.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTAGAACCTGTATTTC	-14	True	NA	NA	False	NA	NA	NA	61751097	61715557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_61715829_61716968_61717018_61750884
transcript_43241.known	chr14	+	740	4	FSM	ENSG00000139973.18	ENST00000636133.1	740	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTTATTTGTTTTTCAT	1	True	NA	NA	False	NA	NA	NA	61812720	62075391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_61812811_61970131_61970312_62069602_62069816_62075134
transcript_43244.known	chr14	+	1096	1	FSM	ENSG00000261242.1	ENST00000561909.1	1096	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCATTTCTCCTGT	NA	False	NA	NA	False	AATAAA	-37	NA	63543568	63544664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_63543600_63544700
transcript_43245.known	chr14	-	976	4	FSM	ENSG00000140006.12	ENST00000554717.1	976	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	52.4679796532027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTATAAACAGATTTACT	-4	True	NA	NA	False	NA	NA	NA	63641853	63599262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_63599974_63624927_63625034_63641298_63641408_63641803
transcript_43250.known	chr14	-	1687	3	FSM	ENSG00000140006.12	ENST00000267522.7	1687	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	48	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGACTTTTTAGAAGGA	9057	False	NA	-87	True	AGTAAA	-26	NA	63641407	63598501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_63599974_63624927_63625034_63641298
transcript_43251.known	chr14	-	3109	3	FSM	ENSG00000140006.12	ENST00000620954.2	3109	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	18.5	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-22	True	NA	NA	False	ATTAAA	-20	NA	63641871	63597038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_63599974_63624927_63625034_63641803
transcript_43259.known	chr14	+	840	3	FSM	ENSG00000274015.3	ENST00000656655.1	840	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCTTCAAGCATCTTT	6	True	NA	NA	False	AATAAA	-19	NA	63642152	63665593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_63642198_63651331_63651457_63664923
transcript_43263.nic	chr14	+	341	2	FSM	ENSG00000274015.3	ENST00000686344.1	314	2	-45	18	-19	-18	multi-exon	FALSE	canonical	3	56	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGATACTTTATT	660	False	NA	23	True	AATGAA	-27	NA	63642015	63651490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_63642198_63651331
transcript_43265.nnic	chr14	+	361	2	NNC	ENSG00000274015.3	novel	314	2	NA	NA	3	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGATACTTTATT	682	False	NA	23	True	AATGAA	-27	NA	63642037	63651490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_63642198_63651289
transcript_43266.known	chr14	+	919	3	FSM	ENSG00000274015.3	ENST00000668431.1	919	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGACCTTCAAGCATCTT	-8	True	NA	NA	False	AATAAA	-18	NA	63642060	63665592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_63642186_63651331_63651457_63664923
transcript_4327.known	chr1	-	867	6	FSM	ENSG00000066322.15	ENST00000470968.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	94.6648826122971	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTACAGGGACCACGG	20	False	43368045	NA	False	NA	NA	NA	43368025	43363770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_43273.known	chr14	+	6766	36	FSM	ENSG00000054654.20	ENST00000555612.5	6766	36	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	46.0199601770132	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTGTTGTACTGAAT	NA	False	NA	12	True	ATTAAA	-15	NA	64141437	64226430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64141524_64141941_64142089_64143771_64143949_64146067_64146224_64152563_64152717_64158624_64158796_64159311_64159443_64162071_64162277_64163401_64163582_64165284_64165411_64167232_64167388_64167494_64167640_64168876_64168972_64170227_64170463_64174943_64175139_64177357_64177484_64186423_64186580_64188549_64188709_64190070_64190238_64202800_64202964_64207957_64208193_64208757_64208946_64209427_64209579_64209941_64210125_64211960_64212099_64212810_64213006_64214193_64214471_64216247_64216388_64218397_64218513_64219207_64219411_64220436_64220638_64221533_64221705_64223188_64223381_64224460_64224548_64224995_64225046_64225318
transcript_43276.nic	chr14	+	1063	2	ISM	ENSG00000054654.20	ENST00000553289.5	5261	27	24205	37081	-10435	-19594	internal_fragment	FALSE	canonical	3	79	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCTTGTTAAAGGGGAGA	NA	False	NA	NA	False	AAAAAG	-5	NA	64186318	64189351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_64186580_64188549
transcript_43277.nic	chr14	-	1065	2	ISM	ENSG00000140009.19	ENST00000554572.5	3588	14	-575	109723	-559	-101367	5prime_fragment	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCCTGTTTGTAAGGTA	NA	False	NA	NA	False	AATAAA	-13	NA	64338671	64336429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_64336721_64337897
transcript_43279.known	chr14	-	1717	3	FSM	ENSG00000214770.3	ENST00000359491.1	1717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTTCATCTCAAAAAAA	11	False	NA	NA	False	NA	NA	NA	64338599	64335834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_64336721_64337400_64337530_64337897
transcript_43280.nnic	chr14	-	1668	2	ISM	ENSG00000140009.19	ENST00000554572.5	3588	14	-551	109096	-535	-100740	5prime_fragment	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTGTTTATCACAGC	NA	False	NA	NA	False	NA	NA	NA	64338647	64335802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_64336721_64337897
transcript_43295.known	chr14	-	10365	3	FSM	ENSG00000089775.12	ENST00000608382.6	10365	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	17.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGTGTCCTTTCATG	-20	True	NA	-4	True	AATAAA	-18	NA	64503838	64478050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_64488058_64490360_64490541_64503660
transcript_43298.known	chr14	+	2497	1	FSM	ENSG00000126803.10	ENST00000247207.7	2497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1922	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTCTTGGAGTTTTC	-1	True	NA	17	True	AGTAAA	-19	NA	64540740	64543237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64540700_64543200
transcript_43299.known	chr14	+	3154	28	FSM	ENSG00000100714.17	ENST00000652337.1	3154	28	0	0	0	0	multi-exon	TRUE	canonical	3	1366	junction_8	123.394990705209	5721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCTTAACAGACTGT	18	True	NA	9	True	AATAAA	-38	NA	64388352	64460025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
transcript_43300.known	chr14	+	3082	26	FSM	ENSG00000100714.17	ENST00000557370.3	3082	26	0	0	0	0	multi-exon	FALSE	canonical	3	1366	junction_8	106.63324809833	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGTAGTGCTAACAT	27	True	NA	47	True	NA	NA	NA	64388361	64455173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722
transcript_43301.known	chr14	-	565	3	FSM	ENSG00000089775.12	ENST00000555424.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTGGCCTGGGTTTGA	9919	False	NA	NA	False	ATTAAA	-41	NA	64490533	64449329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_64449639_64487113_64487197_64490360
transcript_43302.known	chr14	+	1400	13	FSM	ENSG00000165807.8	ENST00000467261.5	1400	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.39646730742473	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTAAACTACTTTGACTT	10	True	NA	-18	True	NA	NA	NA	64549939	64589357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64550067_64550920_64550986_64551633_64551688_64552813_64552862_64564750_64564838_64565356_64565455_64565625_64565693_64568348_64568448_64574454_64574590_64586836_64586880_64587193_64587373_64588103_64588296_64589151
transcript_43303.known	chr14	+	1349	12	FSM	ENSG00000165807.8	ENST00000298705.6	1349	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.50289089053386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGGTTATTCGTTGTT	-1	True	NA	6	True	AGTAAA	-17	NA	64549960	64589381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64550067_64550920_64550986_64552813_64552862_64564750_64564838_64565356_64565455_64565625_64565693_64568348_64568448_64574454_64574590_64586836_64586880_64587193_64587373_64588103_64588296_64589151
transcript_43307.known	chr14	+	1468	14	FSM	ENSG00000125954.13	ENST00000549987.1	1468	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	685.574703847956	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTATACGTTTCAATA	33	True	NA	NA	False	NA	NA	NA	64914492	65061361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_43309.known	chr14	-	922	2	FSM	ENSG00000176153.13	ENST00000389614.6	922	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCAGCCTGTGTGTGTGT	2	True	NA	NA	False	AATAAA	-16	NA	64942745	64939157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_64939839_64942504
transcript_4331.known	chr1	-	1483	8	FSM	ENSG00000159479.17	ENST00000290663.10	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	67.3740699833582	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	3	True	NA	-14	True	AATAAA	-15	NA	43389808	43383916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43384553_43385045_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_43310.known	chr14	+	439	3	FSM	ENSG00000258289.10	ENST00000548752.7	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	1058	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCATATTTTTTTTC	NA	False	NA	54	True	AATACA	-41	NA	64914414	64932320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64914535_64923990_64924127_64932137
transcript_43311.known	chr14	+	1023	4	FSM	ENSG00000258289.10	ENST00000551093.6	1023	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	940.650956637063	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATTTGTTGAGATGAG	17	True	NA	NA	False	NA	NA	NA	64914476	64944056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64943298
transcript_43313.known	chr14	-	3437	7	FSM	ENSG00000139998.16	ENST00000533601.7	3437	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_3	25.6168347424545	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGTGTGGCTGCCTGGATG	-44	True	NA	-5	True	AATAAA	-16	NA	64972336	64945815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_64948513_64948667_64948734_64950324_64950415_64951073_64951152_64951602_64951664_64952510_64952572_64971952
transcript_43315.known	chr14	+	2711	12	FSM	ENSG00000257365.8	ENST00000246166.3	2711	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	14.4239241115883	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	4	True	NA	8	True	AATAAA	-15	NA	64986894	65062650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64987098_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_43317.known	chr14	-	623	6	FSM	ENSG00000125952.20	ENST00000553928.5	623	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	143.780944495437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAAAAACTGTCTGTCT	398	False	NA	NA	False	NA	NA	NA	65102360	65076457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077327_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43322.known	chr14	-	2010	5	FSM	ENSG00000125952.20	ENST00000358664.9	2010	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	114.998913038341	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	241	False	65102536	-3	True	AATAAA	-17	NA	65102517	65075126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43324.known	chr14	-	615	5	FSM	ENSG00000125952.20	ENST00000556979.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	140.662717164144	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGACCTTCCAGGCTCA	241	False	65102536	NA	False	AATAAA	-22	NA	65102517	65077286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43325.known	chr14	-	571	5	FSM	ENSG00000125952.20	ENST00000557746.5	571	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	169.175020319195	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTTCCTCCCTCATGG	241	False	65102536	NA	False	NA	NA	NA	65102517	65077384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65077429_65077562_65077644_65077912_65078037_65093707_65093816_65102303
transcript_43326.known	chr14	-	330	4	FSM	ENSG00000125952.20	ENST00000341653.6	330	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	69.7869774544092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	5	True	NA	NA	False	AAAAAG	-21	NA	65102387	65006173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65006285_65093707_65093816_65101545_65101573_65102303
transcript_43329.known	chr14	-	1973	4	FSM	ENSG00000125952.20	ENST00000358402.8	1973	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	50.9901951359278	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTGTCTTCTTACC	-8	True	NA	0	True	AATAAA	-20	NA	65102504	65075123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102303
transcript_43330.known	chr14	-	474	4	FSM	ENSG00000125952.20	ENST00000556892.5	474	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	180.022220850649	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGACAACAGCCTCTACA	63	False	NA	NA	False	NA	NA	NA	65102695	65076608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102508
transcript_43331.known	chr14	-	3155	4	FSM	ENSG00000125952.20	ENST00000284165.10	3155	4	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_3	115.034294403403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGAAGAATTGTCTTGCA	8	True	NA	-19	True	AATAAA	-18	NA	65102488	65075201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43335.known	chr14	-	574	4	FSM	ENSG00000125952.20	ENST00000555667.5	574	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	163.994579856233	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATTAAATGGGTTG	241	False	65102536	NA	False	AATAAA	-8	NA	65102517	65077300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65102303
transcript_43336.known	chr14	-	897	4	FSM	ENSG00000125952.20	ENST00000246163.2	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	57.0633176587396	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGTACCTCTTTTT	-13	True	NA	NA	False	AATAAA	-19	NA	65102509	65083743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65084300_65093707_65093816_65101545_65101573_65102303
transcript_43337.known	chr14	-	585	3	FSM	ENSG00000125952.20	ENST00000556443.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_2	60	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGAGTGTTAGAGCCG	241	False	65102536	NA	False	NA	NA	NA	65102517	65077773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65078037_65093707_65093816_65102303
transcript_43338.known	chr14	-	327	2	FSM	ENSG00000125952.20	ENST00000554709.1	327	2	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTGAGAAAGCTGAGTA	241	False	65102536	NA	False	NA	NA	NA	65102517	65093702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65093816_65102303
transcript_43339.known	chr14	+	5166	11	FSM	ENSG00000033170.17	ENST00000360689.9	5166	11	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	26.0478406014779	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	13	False	NA	15	True	AATAAA	-16	NA	65410591	65744121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_65411994_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_4334.known	chr1	-	1968	7	FSM	ENSG00000159479.17	ENST00000372457.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	23.9263917509979	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-10	True	NA	-14	True	AATAAA	-15	NA	43389800	43383916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_43341.known	chr14	+	4249	11	FSM	ENSG00000033170.17	ENST00000673929.1	4249	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	18.4813419426188	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	-40	True	NA	15	True	AATAAA	-16	NA	65412729	65744121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_65413215_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_43343.known	chr14	+	3559	10	FSM	ENSG00000033170.17	ENST00000394586.6	3559	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.17608239856	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAAAGTTTCTAGAAT	543	False	NA	18	True	AATAAA	-14	NA	65411121	65743142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_65411994_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_43345.known	chr14	+	496	3	FSM	ENSG00000033170.17	ENST00000549235.6	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	21.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAACAGG	10	True	NA	NA	False	NA	NA	NA	65411890	65458188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_65411994_65455620_65455719_65457893
transcript_43346.known	chr14	+	539	3	FSM	ENSG00000033170.17	ENST00000556292.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	38	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAACAGG	0	True	NA	NA	False	NA	NA	NA	65413068	65458188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_65413215_65455620_65455719_65457893
transcript_43347.nic	chr14	+	1403	2	ISM	ENSG00000033170.17	ENST00000549235.6	496	3	-33	1301	-5	-1301	5prime_fragment	FALSE	canonical	3	44	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGCATTGATGCA	-23	True	NA	NA	False	NA	NA	NA	65411857	65456887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_65411994_65455620
transcript_43348.nic	chr14	+	1591	2	ISM	ENSG00000033170.17	ENST00000556292.1	539	3	-183	1306	-95	-1306	5prime_fragment	FALSE	canonical	3	77	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTTTTTTGCATTG	-21	True	NA	NA	False	NA	NA	NA	65412885	65456882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_65413215_65455620
transcript_43349.known	chr14	-	1521	1	FSM	ENSG00000276116.2	ENST00000621019.2	1521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATGCATGGATGCT	1034	False	NA	NA	False	AATAAA	-16	NA	65412690	65411169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65411200_65412700
transcript_4335.known	chr1	-	1186	7	FSM	ENSG00000159479.17	ENST00000372455.4	1186	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	89.6314986796247	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTCTCCCCACCACCC	6	True	NA	-19	True	AATAAA	-15	NA	43389784	43384725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387630_43388309_43388490_43389758
transcript_43351.nnic	chr14	-	613	4	NNC	ENSG00000258561.2	novel	914	4	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	0.816496580927726	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATTAAGTTTACCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	66507900	66494643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_66494857_66496261_66496343_66505284_66505346_66507642
transcript_43352.nnic	chr14	-	547	4	NNC	ENSG00000258561.2	novel	914	4	NA	NA	430	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.09120616516523	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATTAAGTTTACCTT	NA	False	NA	NA	False	ATTAAA	-18	NA	66508749	66494643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_66494857_66496261_66496343_66505284_66505346_66508557
transcript_43354.known	chr14	+	3557	23	FSM	ENSG00000171723.16	ENST00000478722.6	3557	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	9.55324357534745	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGTGTTGGCCTCGTT	-5	True	NA	24	True	AATAAA	-27	NA	66508146	67181803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_66508592_66681106_66681186_66776463_66776522_66824473_66824567_66879938_66880034_66916002_66916070_66922665_66922939_66924193_66924293_66965190_66965326_67023632_67023676_67058648_67058787_67088982_67089076_67100855_67100912_67110139_67110260_67111860_67111920_67113017_67113172_67122255_67122378_67143361_67143450_67159414_67159489_67165161_67165227_67168932_67169037_67179577_67179675_67180803
transcript_43357.nic	chr14	+	849	3	ISM	ENSG00000171723.16	ENST00000459628.5	1723	11	317	281933	-49	-47458	5prime_fragment	FALSE	canonical	3	53	junction_1	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGAATCAAATAGAC	259	False	NA	NA	False	AATAAA	-11	NA	66508454	66777096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_66508592_66681106_66681186_66776463
transcript_43358.known	chr14	+	5468	15	FSM	ENSG00000072415.10	ENST00000261681.9	5468	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	12.8874642460756	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAACTTGAAAGTTTTC	-1	True	NA	NA	False	ATTAAA	-39	NA	67241434	67336061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_43361.known	chr14	+	5006	15	FSM	ENSG00000072415.10	ENST00000555925.5	5006	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	20.4789588383306	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAATTTCTCTTGCTA	-13	True	NA	21	True	AATAAA	-33	NA	67241422	67335819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67241534_67269700_67269784_67279249_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_43372.known	chr14	-	1599	9	FSM	ENSG00000100554.12	ENST00000216442.12	1599	9	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	23.9478600296561	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCATTATAATACTTC	-13	True	NA	NA	False	AATAAA	-18	NA	67359804	67337871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_43373.known	chr14	-	888	8	FSM	ENSG00000100554.12	ENST00000554236.5	888	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	173.830670598765	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGATGTCTATTTATGG	4	True	NA	-11	True	NA	NA	NA	67359787	67338498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67338763_67340439_67340519_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_43376.known	chr14	+	4154	8	FSM	ENSG00000134001.15	ENST00000256383.11	4154	8	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_5	134.54898205274	2476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGATACAGACTTTTC	-10	True	NA	16	True	AATAAA	-18	NA	67360327	67386516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67360457_67364766_67365009_67374467_67374548_67376438_67376591_67380658_67380766_67381592_67381691_67382446_67382591_67383314
transcript_43377.known	chr14	-	1513	9	FSM	ENSG00000100558.9	ENST00000216446.9	1513	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	2.73861278752583	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCTCTTAACTTCTTT	-13	True	NA	-11	True	AATAAA	-16	NA	67412165	67386983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67387457_67388223_67388303_67390662_67390747_67392325_67392428_67392661_67392850_67393149_67393242_67395401_67395584_67397661_67397827_67412017
transcript_43380.known	chr14	-	594	4	FSM	ENSG00000100564.9	ENST00000558001.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	37.3838943337309	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGATCCTGGCACAC	2	True	NA	NA	False	NA	NA	NA	67600282	67590126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67590173_67592634_67592719_67593742_67593948_67600023
transcript_43387.known	chr14	-	1103	7	FSM	ENSG00000100568.11	ENST00000216456.6	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	508.888794881117	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTGGGAGGAGGGA	7	True	NA	-125	True	NA	NA	NA	67674610	67651263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67663028_67663191_67674374
transcript_43389.known	chr14	-	5142	6	FSM	ENSG00000100568.11	ENST00000554659.6	5142	6	0	0	0	0	multi-exon	FALSE	canonical	3	1024	junction_4	76.8156234108661	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-15	True	NA	-13	True	AGTAAA	-19	NA	67674632	67647084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67674374
transcript_434.known	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	0	0	0	0	multi-exon	TRUE	canonical	3	2297	junction_3	8536.74432874588	8186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1000	11826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_43400.known	chr14	-	888	4	FSM	ENSG00000072042.13	ENST00000554731.1	888	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	429.016187210796	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATATGACCTGCACAG	-4	True	NA	NA	False	NA	NA	NA	67695766	67678072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67695629
transcript_43403.known	chr14	+	1911	8	FSM	ENSG00000081181.8	ENST00000261783.4	1911	8	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	70.7398222289227	1637	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTGAAATGTTGTTC	0	True	NA	10	True	AATAAA	-17	NA	67619919	67651708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643_67646739_67646920_67647026_67648046_67648184_67650714
transcript_43404.known	chr14	-	2539	7	FSM	ENSG00000072042.13	ENST00000381346.9	2539	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	342.077679612232	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAACACTGTTCATTA	-2	True	NA	58	True	AATAAA	-34	NA	67695764	67676799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_43405.known	chr14	-	1926	7	FSM	ENSG00000072042.13	ENST00000553384.5	1926	7	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_5	208.871105921544	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTAAAAACAAACAAACAA	8	True	NA	NA	False	NA	NA	NA	67695754	67677363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692972_67693053_67695629
transcript_43406.known	chr14	+	1878	9	FSM	ENSG00000139988.10	ENST00000551171.6	1878	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6583123951777	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTATTTATTTTCTCA	0	True	NA	12	True	AATAAA	-17	NA	67701885	67734451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67701936_67720847_67720903_67722423_67722711_67724472_67724592_67725098_67725255_67726050_67726156_67726980_67727191_67729190_67729381_67733745
transcript_43407.nic	chr14	-	556	3	ISM	ENSG00000072121.17	ENST00000557407.1	2819	12	-24	16542	-19	1667	5prime_fragment	FALSE	canonical	3	35	junction_1	5.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCTTAAATTTTTATT	NA	False	NA	NA	False	ATTAAA	-22	NA	67816609	67813861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_67814065_67815769_67816047_67816533
transcript_43408.known	chr14	+	922	7	FSM	ENSG00000182185.19	ENST00000390683.7	922	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	5.61990510002912	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTACAGTCTAATTGC	-5	True	NA	NA	False	AATAAA	-35	NA	67819811	67887326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020
transcript_43414.nic	chr14	+	921	4	ISM	ENSG00000182185.19	ENST00000390683.7	922	7	-56	51624	-23	596	5prime_fragment	FALSE	canonical	3	47	junction_1	3.74165738677394	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCAGAAACCATTTAG	NA	False	NA	NA	False	AATAAA	-2	NA	67819755	67835702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079
transcript_43416.known	chr14	+	1536	11	FSM	ENSG00000182185.19	ENST00000471583.6	1559	11	29	-6	0	-2	multi-exon	FALSE	canonical	3	9	junction_10	13.0633073913156	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGGTGTAAAGGAATTG	-9	True	NA	NA	False	AATAAA	-22	NA	67819807	68478099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68477647
transcript_43418.nic	chr14	+	1040	4	ISM	ENSG00000182185.19	ENST00000557045.5	528	6	291603	-624	-95255	0	3prime_fragment	FALSE	canonical	2	7	junction_3	19.7371617907833	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGCATTTTGTTCATT	6644	False	NA	3	True	NA	NA	NA	68291881	68497881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_68291981_68411423_68411528_68468171_68468251_68497123
transcript_43419.known	chr14	+	2596	11	FSM	ENSG00000182185.19	ENST00000487270.5	2596	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	14.4013888219158	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAATCAGGGGAAAAATA	-9	True	NA	NA	False	NA	NA	NA	67819807	68595996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68594484
transcript_43420.known	chr14	+	1673	11	FSM	ENSG00000182185.19	ENST00000487861.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.4932243254915	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGTACCATATAGAAATA	-1	True	NA	NA	False	NA	NA	NA	67819778	68611565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68611005
transcript_43421.known	chr14	-	279	2	FSM	ENSG00000259038.2	ENST00000556301.2	319	2	34	6	34	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCACGTAGCAATCTCAT	215	False	NA	NA	False	GATAAA	-15	NA	68628445	68627165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_68627351_68628351
transcript_43425.known	chr14	-	3017	2	FSM	ENSG00000185650.10	ENST00000439696.3	3017	2	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_1	0	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-3	True	NA	-12	True	AATAAA	-19	NA	68793067	68787661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_68790493_68792881
transcript_43426.known	chr14	+	447	2	FSM	ENSG00000270975.1	ENST00000605130.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATGTTTTTCAAGCTG	NA	False	NA	NA	False	NA	NA	NA	68861761	68862525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_68862056_68862372
transcript_43428.known	chr14	-	3779	21	FSM	ENSG00000072110.16	ENST00000193403.10	3779	21	0	0	0	0	multi-exon	TRUE	canonical	3	1103	junction_10	105.403273193957	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACACTCCTATGACA	2	True	NA	-24	True	ATTAAA	-1	NA	68979440	68874142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_43433.known	chr14	-	2883	9	FSM	ENSG00000139990.18	ENST00000557386.5	2883	9	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_6	66.0018939122204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGCCTTACAAAAAAAAAA	-1	True	NA	-85	True	ATTAAA	-40	NA	69153003	69053824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118276_69119193_69119231_69122216_69122361_69152764
transcript_43435.known	chr14	-	2791	9	FSM	ENSG00000139990.18	ENST00000556847.5	2791	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_8	69.6688596146083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTAGTGAATACAGAGG	1077	False	NA	-62	True	AAAAAG	-32	NA	69152609	69053801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152488
transcript_43436.known	chr14	-	2837	7	FSM	ENSG00000139990.18	ENST00000389997.10	2837	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	69.9589165153378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGTACGTTGGTCAAT	19	True	NA	NA	False	AATAAA	-17	NA	69152983	69089203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69091157_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152764
transcript_43437.known	chr14	+	5708	16	FSM	ENSG00000100626.17	ENST00000337827.8	5708	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	5.98293870564922	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCAAACACTTTGCTAG	9	True	NA	NA	False	AATAAA	-21	NA	69259963	69357033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69260468_69320710_69320869_69324691_69324791_69325336_69325405_69325961_69326028_69328449_69328572_69331463_69331552_69333084_69333170_69333496_69333601_69338650_69338778_69339526_69339620_69341680_69341765_69347039_69347182_69347876_69348003_69352030_69352171_69353331
transcript_43439.nic	chr14	+	3349	10	FSM	ENSG00000081177.19	ENST00000685843.1	5009	10	0	1660	0	0	multi-exon	FALSE	canonical	3	100	junction_1	27.6409965695527	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	-18	True	NA	29	True	AATAAA	-18	NA	69191497	69242358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_43440.known	chr14	+	2688	10	FSM	ENSG00000081177.19	ENST00000409949.5	2688	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	43.143458654718	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAGAAAAAGTTCTTCC	-39	True	NA	NA	False	GGGGCT	-25	NA	69191765	69241517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69192040_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_43442.known	chr14	+	2496	9	FSM	ENSG00000081177.19	ENST00000409242.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	54.0069439979712	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCTTGTCTAGTGC	1	True	NA	NA	False	NA	NA	NA	69191805	69241449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69192040_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_43448.nic	chr14	+	1226	3	ISM	ENSG00000081177.19	ENST00000492815.5	3243	10	-31	31886	0	900	5prime_fragment	FALSE	canonical	3	100	junction_1	31.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTACATGAGTTTTTT	-18	True	NA	NA	False	AATAAA	-18	NA	69191497	69210471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_69191592_69203916_69204001_69209423
transcript_43455.known	chr14	+	3252	9	FSM	ENSG00000081177.19	ENST00000409018.7	3252	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	54.3264150759094	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	-5	True	NA	29	True	AATAAA	-18	NA	69191510	69242358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69191592_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_43471.known	chr14	-	668	3	FSM	ENSG00000100632.11	ENST00000216520.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	1264.5	11751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATATTTTCTCCCTGAG	36	False	NA	-19	True	AATAAA	-13	NA	69398271	69380134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69380641_69386962_69387084_69398230
transcript_43472.known	chr14	-	791	4	FSM	ENSG00000100632.11	ENST00000557016.6	791	4	0	0	0	0	multi-exon	FALSE	canonical	3	2536	junction_1	175.523977469366	36189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCCTGAGTGCTTTT	8	True	NA	-12	True	AATAAA	-20	NA	69398299	69380127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69380641_69386962_69387084_69394824_69394913_69398230
transcript_43473.known	chr14	+	2065	7	FSM	ENSG00000029364.12	ENST00000556605.5	2065	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	50.6524102749974	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTGGCTCATTACT	-7	True	NA	24	True	ATTAAA	-21	NA	69398689	69462388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69461696
transcript_43474.known	chr14	+	5399	7	FSM	ENSG00000029364.12	ENST00000336643.10	5399	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	27.5887456925626	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGGCTCATTACTTA	-5	True	NA	26	True	ATTAAA	-23	NA	69398691	69462390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_43475.known	chr14	+	1763	3	FSM	ENSG00000029364.12	ENST00000554059.1	1763	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	65.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCACTATTAATGTAC	11	True	NA	NA	False	NA	NA	NA	69398707	69429457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69428561
transcript_43476.known	chr14	+	3701	8	FSM	ENSG00000029364.12	ENST00000628474.2	3701	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	63.9910708056768	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTTTGGACAGTAG	-5	True	NA	9	True	AATAAA	-18	NA	69398691	69460551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69441831_69441973_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_43477.known	chr14	-	4182	2	FSM	ENSG00000267909.3	ENST00000599174.3	4182	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCCTGAAATGGCTGAT	-4	True	NA	-5	True	ATTAAA	-31	NA	69574871	69569798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69573651_69574541
transcript_43488.known	chr14	+	1638	8	FSM	ENSG00000100650.16	ENST00000394366.6	1638	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	570.540023457905	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATTGATAATAAAAT	NA	False	NA	11	True	NA	NA	NA	69767092	69771973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_43497.known	chr14	+	2443	7	FSM	ENSG00000100650.16	ENST00000556184.5	2443	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	613.651819483619	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTATTAAATGTCTTT	7	False	NA	-4	True	NA	NA	NA	69767171	69771642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69770541_69770994_69771106_69771193
transcript_43505.known	chr14	+	565	5	FSM	ENSG00000100650.16	ENST00000555349.5	565	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	778.460459817967	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAATGTAATTTGGGG	3	True	NA	NA	False	TTTAAA	-36	NA	69767939	69769383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767988_69768137_69768283_69768603_69768675_69768797_69768897_69769181
transcript_43507.known	chr14	+	3044	6	FSM	ENSG00000100650.16	ENST00000554465.5	3044	6	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	217.727719870484	5618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	NA	False	NA	13	True	AATAAA	-14	NA	69767092	69772004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69770541_69770994_69771106_69771193
transcript_43508.known	chr14	+	2057	8	FSM	ENSG00000100650.16	ENST00000555547.5	2057	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	615.175103660141	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTTGATAAGCCTTC	21	False	NA	8	True	NA	NA	NA	69767185	69771654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69769510_69770541_69770994_69771106_69771193
transcript_43509.known	chr14	+	1412	8	FSM	ENSG00000100650.16	ENST00000553635.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	665.866322307769	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAGACACATTAGAGCA	28	False	NA	-13	True	NA	NA	NA	69767156	69771949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767252_69768137_69768283_69768612_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_43510.known	chr14	+	644	4	FSM	ENSG00000100650.16	ENST00000556647.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	763.647970089767	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	99	False	NA	14	True	AATAAA	-15	NA	69770447	69772005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69770541_69770994_69771106_69771193_69771545_69771916
transcript_43511.known	chr14	-	801	1	FSM	ENSG00000242071.3	ENST00000477943.1	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1686	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	16	False	NA	NA	False	AAAAAG	-37	NA	69886140	69885339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69885300_69886100
transcript_43512.nnic	chr14	-	722	3	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	9	junction_1	13	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTTATAACTCCTCCT	NA	False	NA	-3	True	AATAAA	-24	NA	70252986	70238303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr14_-_70238663_70239479_70239706_70252849
transcript_43513.nnic	chr14	-	674	3	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	18	junction_1	8.5	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTTATAACTCCTCCT	NA	False	NA	-3	True	AATAAA	-24	NA	70252986	70238303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr14_-_70238663_70239527_70239706_70252849
transcript_43514.nnic	chr14	-	474	3	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	13	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCCTGCAGCTCTAAAA	NA	False	NA	-20	True	AATAAA	-11	NA	70252986	70238551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr14_-_70238663_70239479_70239706_70252849
transcript_43518.known	chr14	-	929	6	FSM	ENSG00000258644.6	ENST00000621525.4	929	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_3	1275.17568985611	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTATTCCACTCTCCA	-28	True	NA	-25	True	AATAAA	-28	NA	70417074	70326063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70375675_70375772_70388469_70388607_70416899
transcript_4353.known	chr1	-	1322	9	FSM	ENSG00000178922.18	ENST00000583037.5	1322	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	23.8271772352497	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCCGAGAGCAAAGGGACT	-33	True	NA	NA	False	ATTAAA	-16	NA	43453989	43451002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902_43453005_43453412_43453498_43453594
transcript_4354.known	chr1	-	1066	8	FSM	ENSG00000178922.18	ENST00000372432.5	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	13.1226552813313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	-7	True	NA	-7	True	ATTAAA	-15	NA	43453963	43451157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453385_43453498_43453594
transcript_43543.known	chr14	-	318	4	FSM	ENSG00000133983.16	ENST00000555276.5	318	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1270.85386868654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTAAGACAACTTGAC	-3	True	NA	-48	True	AAGAAA	-13	NA	70416984	70326351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70416899
transcript_4355.known	chr1	-	796	8	FSM	ENSG00000178922.18	ENST00000372433.5	796	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	22.3889550029127	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATGTCTCTGTAATGG	891	False	NA	-3	True	ATTAAA	-19	NA	43453716	43451153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453412_43453498_43453594
transcript_43554.known	chr14	-	7057	4	FSM	ENSG00000213463.5	ENST00000256366.6	7057	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	26.1916017074176	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTTTTTCACCTTATT	-44	True	NA	-1	True	AATAAA	-21	NA	70417090	70366498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70373132_70375675_70375772_70388469_70388607_70416899
transcript_4356.nic	chr1	-	1026	7	ISM	ENSG00000178922.18	ENST00000372434.5	1025	9	500	4	127	0	3prime_fragment	FALSE	canonical	3	16	junction_6	23.2695556945598	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	1282	False	NA	-7	True	ATTAAA	-15	NA	43453325	43451157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902
transcript_43568.known	chr14	-	902	3	FSM	ENSG00000213463.5	ENST00000554216.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	76	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACACATACGTATGCA	-15	True	NA	-73	True	AATACA	-1	NA	70417061	70372487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70373132_70375675_70375772_70416899
transcript_43575.known	chr14	-	1669	4	FSM	ENSG00000133983.16	ENST00000389912.7	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2511	junction_3	101.299336402345	5701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAGTGATAATTTGTG	-16	True	NA	-12	True	AATAAA	-17	NA	70359683	70325080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70359518
transcript_43576.known	chr14	-	627	3	FSM	ENSG00000133983.16	ENST00000557612.5	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1198.5	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	28	False	70359728	-29	True	AATAAA	-24	NA	70359700	70326067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70359518
transcript_43577.known	chr14	-	447	2	FSM	ENSG00000133983.16	ENST00000554366.5	447	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	NA	False	NA	-29	True	AATAAA	-24	NA	70328230	70326067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70328165
transcript_43588.known	chr14	-	975	9	FSM	ENSG00000133997.12	ENST00000554963.5	975	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.6273031470386	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGATTGTTGTACTTTG	20	True	NA	-6	True	AATAAA	-16	NA	70600643	70581256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70581489_70584816_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_43589.known	chr14	-	1507	8	FSM	ENSG00000133997.12	ENST00000430055.6	1507	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	73.786232884362	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATGAAGAAAAGGAAAAA	8	True	NA	NA	False	AATAAA	-19	NA	70600655	70584085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70584944_70585755_70585784_70591265_70591382_70592879_70593010_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_4359.nnic	chr1	-	654	7	NNC	ENSG00000178922.18	novel	1066	8	NA	NA	353	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	24.864074931962	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	1508	False	NA	-7	True	ATTAAA	-15	NA	43453099	43451157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453030
transcript_43590.known	chr14	-	862	5	FSM	ENSG00000133997.12	ENST00000556495.5	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	6.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-1	True	NA	NA	False	NA	NA	NA	70600664	70592510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_43591.known	chr14	-	1093	4	FSM	ENSG00000133997.12	ENST00000554870.5	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	6.54896090146283	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTGGATCACCTGAGC	8	True	NA	NA	False	NA	NA	NA	70600655	70592577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70593379_70596610_70596703_70597617_70597778_70600615
transcript_43592.known	chr14	+	5094	3	FSM	ENSG00000133985.3	ENST00000256367.3	5094	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	6.5	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTCTGTTGCCAGC	-13	True	NA	19	True	CATAAA	-20	NA	70641915	70675366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70642536_70667563_70667747_70671075
transcript_43604.known	chr14	+	732	3	FSM	ENSG00000259153.3	ENST00000557691.2	732	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	17.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTCCTAATCTTGTGAA	1040	False	NA	21	True	AATAAA	-31	NA	70809840	70815403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70809940_70810325_70810666_70815110
transcript_43608.nnic	chr14	+	1184	3	NNC	ENSG00000259153.3	novel	1019	2	NA	NA	0	-10	intron_retention	FALSE	canonical	1	2	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAACTATATATATAATAC	-1	True	NA	4	True	AATAAA	-14	NA	70809899	70815386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_70810675_70814226_70814360_70815110
transcript_43610.nnic	chr14	+	1133	3	NNC	ENSG00000259153.3	novel	1659	2	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAACTATATATATAATAC	-25	True	NA	4	True	AATAAA	-14	NA	70809941	70815386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_70810666_70814226_70814360_70815110
transcript_43612.known	chr14	+	963	2	FSM	ENSG00000259153.3	ENST00000653562.2	1019	2	49	7	49	-7	multi-exon	FALSE	canonical	3	47	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	24	True	NA	7	True	AATAAA	-17	NA	70809990	70815389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70810675_70815110
transcript_43613.known	chr14	+	1659	2	FSM	ENSG00000259153.3	ENST00000661317.1	1659	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAGTATAATGATAA	1090	False	NA	NA	False	AAAACA	-43	NA	70809890	70815994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70810666_70815110
transcript_43615.known	chr14	+	368	2	ISM	ENSG00000259153.3	ENST00000554032.2	537	3	305	5	263	-5	3prime_fragment	FALSE	canonical	3	26	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	238	False	NA	9	True	AATAAA	-19	NA	70810204	70815391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_70810292_70815110
transcript_43618.nnic	chr14	+	828	2	ISM	ENSG00000259153.3	ENST00000685546.1	489	3	42	5	0	-5	3prime_fragment	FALSE	canonical	3	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	-25	True	NA	9	True	AATAAA	-19	NA	70809941	70815391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_70810489_70815110
transcript_43619.known	chr14	+	284	2	FSM	ENSG00000275630.1	ENST00000622856.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGCGTCTGATGATAGTT	NA	False	NA	8	True	CATAAA	-23	NA	70822003	70823984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70822123_70823819
transcript_4362.known	chr1	+	1191	5	FSM	ENSG00000198198.17	ENST00000372450.8	1191	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.06828373317832	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAGAATGTGCAAATGT	1	True	NA	NA	False	AATACA	-29	NA	43389881	43406894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43389996_43403176_43403303_43403606_43403775_43404379_43404551_43406282
transcript_43635.nnic	chr14	-	533	3	NNC	ENSG00000259146.4	novel	464	3	NA	NA	1423	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAGTTATTCTCTTCA	1451	False	NA	NA	False	ATTAAA	-23	NA	71320391	71307169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_71307364_71310557_71310680_71320174
transcript_4364.known	chr1	+	1601	5	FSM	ENSG00000198198.17	ENST00000357658.4	1601	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.87228132326901	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAATCTAAGACCTC	35	False	NA	NA	False	NA	NA	NA	43389950	43410577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43389996_43403176_43403303_43403600_43403775_43404379_43404551_43409492
transcript_43651.nic	chr14	+	2434	14	NIC	ENSG00000119599.17	novel	2374	14	NA	NA	-3	0	intron_retention	FALSE	canonical	2	37	junction_9	13.6689515576869	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	-27	True	NA	27	True	AATAAA	-12	NA	72926447	72959644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_43652.known	chr14	+	2474	14	FSM	ENSG00000119599.17	ENST00000358377.7	2474	14	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_9	13.3500880922564	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCAGCTTTCATAGCCT	-11	True	NA	86	True	NA	NA	NA	72926463	72959703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_43654.known	chr14	+	1872	14	FSM	ENSG00000119599.17	ENST00000509320.5	1872	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	26.4302140176305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACGAAAAGCTTCT	-24	True	NA	NA	False	AAAAAG	-24	NA	72926450	72959121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940251_72940378_72941744_72941825_72942993_72943097_72945887_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_43655.nic	chr14	+	2409	14	NIC	ENSG00000119599.17	novel	2474	14	NA	NA	-13	0	intron_retention	FALSE	canonical	2	6	junction_3	20.8783458502772	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	NA	False	NA	27	True	AATAAA	-12	NA	72926437	72959644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_72926544_72937970_72938071_72939801_72939903_72940251_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_43659.nic	chr14	+	1119	7	ISM	ENSG00000119599.17	ENST00000555042.5	2374	14	-164	13405	-54	210	5prime_fragment	FALSE	canonical	2	50	junction_4	6.1913918736689	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTATTTGAGTGTGG	NA	False	NA	NA	False	NA	NA	NA	72926322	72946239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883
transcript_4366.known	chr1	-	640	7	FSM	ENSG00000178922.18	ENST00000470662.5	640	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	25.4471129119898	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	1155	False	NA	-7	True	ATTAAA	-15	NA	43453452	43451157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451827_43451848_43451934_43452014_43452204_43452320_43453385
transcript_43662.known	chr14	-	319	1	FSM	ENSG00000176043.5	ENST00000488095.1	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTCCCCTGCCCTCTT	36	False	NA	NA	False	AAGAAA	-7	NA	72929930	72929611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_72929600_72929900
transcript_43663.known	chr14	+	2374	14	FSM	ENSG00000119599.17	ENST00000555042.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	21.889447891486	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	12	True	NA	27	True	AATAAA	-12	NA	72926486	72959644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954463_72955522_72955697_72956385_72956501_72958611
transcript_43664.known	chr14	-	4380	12	FSM	ENSG00000165861.14	ENST00000556143.6	4380	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	10.720336740733	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGACTGTGCTGGCTCTT	-11	True	NA	-7	True	CATAAA	-15	NA	73027106	72969450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_72971115_72974079_72974194_72974778_72974960_72975550_72975722_72977926_72978045_72978136_72978235_72978860_72978970_72981788_72981896_72993142_72993358_72997810_72998316_73024025_73024943_73026925
transcript_43674.known	chr14	+	3375	20	FSM	ENSG00000119707.14	ENST00000527432.5	3375	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	176.630826169903	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTTCCCAACTAAAG	-5	True	NA	-19	True	NA	NA	NA	73058531	73120391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73069852_73069921_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
transcript_43679.known	chr14	+	1039	8	FSM	ENSG00000119707.14	ENST00000531500.5	1039	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	163.693965330779	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTGTTCTGACAACAAC	-4	True	NA	31	True	NA	NA	NA	73058532	73097100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73064971_73065094_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914
transcript_43681.known	chr14	+	6813	19	FSM	ENSG00000119707.14	ENST00000261973.12	6813	19	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_9	112.33184964401	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGTCTGTCTACTTT	-3	True	NA	NA	False	AATAAA	-38	NA	73058533	73123899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
transcript_43682.known	chr14	+	6848	17	FSM	ENSG00000119707.14	ENST00000532683.5	6848	17	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_6	106.003371850852	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGAATTGCACTTAA	5	True	NA	15	True	ATTAAA	-16	NA	73058541	73120129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111803_73112151_73112251_73114285_73114334_73119712
transcript_43683.known	chr14	+	2470	9	FSM	ENSG00000119707.14	ENST00000525321.5	2470	9	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_6	31.6936014835802	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	10	True	NA	NA	False	AATAAA	-20	NA	73058546	73101179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666
transcript_43684.known	chr14	+	1567	11	FSM	ENSG00000119707.14	ENST00000526754.5	1567	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	146.19675098989	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	12	True	NA	NA	False	AATAAA	-20	NA	73058548	73101179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300_73100363_73100713
transcript_43686.known	chr14	+	2776	12	FSM	ENSG00000080815.19	ENST00000357710.8	2776	12	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	44.3321423233212	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	-43	True	NA	14	True	ATTAAA	-25	NA	73136446	73220401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_43687.known	chr14	+	6018	12	FSM	ENSG00000080815.19	ENST00000324501.10	6018	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	64.0374373974299	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTAGTGTTTTTTAC	17	True	NA	7	True	AATAAA	-16	NA	73136506	73223691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_43699.known	chr14	+	712	5	FSM	ENSG00000080815.19	ENST00000553719.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	132.013967064095	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGTATAAATACAGGTG	-46	True	NA	NA	False	NA	NA	NA	73136443	73173680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73136580_73147794_73147877_73147966_73148095_73170796_73171048_73173565
transcript_4370.known	chr1	+	2168	8	FSM	ENSG00000142949.17	ENST00000436724.5	2168	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	386.311125537805	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTCTCCACCCAG	23	True	NA	NA	False	NA	NA	NA	43530902	43580078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43575909_43575928_43578809
transcript_43702.known	chr14	+	1249	5	FSM	ENSG00000080815.19	ENST00000394157.7	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	90.9958790275692	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCACAATCTAAGTGGGTT	-43	True	NA	NA	False	AATAAA	-14	NA	73136446	73174204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565
transcript_43705.known	chr14	-	3050	2	FSM	ENSG00000258376.2	ENST00000554614.2	3050	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATCAAGTTTCTATTT	16	True	NA	NA	False	AATGAA	-18	NA	73245979	73242650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73245245_73245523
transcript_43711.known	chr14	-	3607	11	FSM	ENSG00000133961.21	ENST00000554546.5	3607	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	76.1167524267818	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	8851	False	NA	82	True	NA	NA	NA	73458617	73275106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_43712.known	chr14	-	3604	13	FSM	ENSG00000133961.21	ENST00000555238.6	3604	13	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	50.7772915123811	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	7	True	NA	-27	True	AATAAA	-15	NA	73458546	73275215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_43713.known	chr14	-	3547	12	FSM	ENSG00000133961.21	ENST00000557597.5	3547	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_7	64.5832155868473	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	31	True	NA	-27	True	AATAAA	-15	NA	73458522	73275215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_43714.known	chr14	-	3037	12	FSM	ENSG00000133961.21	ENST00000555394.5	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	62.7570416845133	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAATTCTAATGTCAT	-27	True	NA	-2	True	AATAAA	-33	NA	73458580	73275672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_43715.known	chr14	-	1740	7	FSM	ENSG00000133961.21	ENST00000554315.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	88.5012554838756	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	7	True	NA	NA	False	NA	NA	NA	73458546	73286192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_43716.known	chr14	-	847	5	FSM	ENSG00000133961.21	ENST00000557774.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	52.3975190252363	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGGTATAAATTATTAG	-24	True	NA	NA	False	AATAAA	-41	NA	73458577	73322800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_43719.nnic	chr14	-	1467	3	NNC	ENSG00000258603.5	novel	1303	2	NA	NA	-25	-11	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACAGTCTCACTCTGT	NA	False	NA	NA	False	ATTAAA	-13	NA	73634461	73616694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_73617211_73619666_73619817_73633660
transcript_4372.known	chr1	+	4486	22	FSM	ENSG00000066135.13	ENST00000372396.4	4486	22	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	42.0984161696248	2038	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGTCTGCCCCAAGGA	-12	True	NA	17	True	AATAAA	-18	NA	43650148	43705518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43650253_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_43720.nnic	chr14	-	852	3	NNC	ENSG00000258603.5	novel	1303	2	NA	NA	34	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACAGTCTCACTCTGT	535	False	NA	NA	False	ATTAAA	-13	NA	73633907	73616694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_73617211_73619666_73619817_73633721
transcript_43724.nnic	chr14	-	1259	2	NNC	ENSG00000258603.5	novel	1303	2	NA	NA	-24	-7	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCTCACTCTGTCGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	73634460	73616690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_73617211_73633721
transcript_43725.known	chr14	-	629	2	FSM	ENSG00000258603.5	ENST00000555011.3	1303	2	658	16	-56	-16	multi-exon	FALSE	canonical	3	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGACAGTCTCAC	664	False	NA	NA	False	ATTAAA	-8	NA	73633778	73616699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73617211_73633660
transcript_43731.known	chr14	+	632	9	FSM	ENSG00000119661.15	ENST00000554871.5	632	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	29.372606285449	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACGCTTTCCACTGTGT	29	True	NA	-64	True	ATTAAA	-25	NA	73645026	73695942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73645043_73653169_73653216_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_43734.known	chr14	+	8417	8	FSM	ENSG00000119661.15	ENST00000553645.7	8417	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	11.0675108275695	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-12	True	NA	8	True	AATAAA	-22	NA	73644985	73703732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73645043_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_43739.known	chr14	+	2312	7	FSM	ENSG00000119661.15	ENST00000311089.7	2312	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	28.7426319060884	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGGAAAACTTGGTC	11	True	NA	NA	False	AATAGA	-34	NA	73645008	73697760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73645043_73654846_73654886_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_43747.nic	chr14	+	484	6	NIC	ENSG00000119661.15	novel	8417	8	NA	NA	-4	-14162	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	30.7701153718994	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTCTGTCCAGTTT	-16	True	NA	NA	False	AATAAA	-19	NA	73644981	73673106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_73645043_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73672944
transcript_43751.known	chr14	+	627	8	FSM	ENSG00000119661.15	ENST00000555631.6	627	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	31.3772307931229	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGATTCTGAGCTGGC	-7	True	NA	NA	False	AAAAAG	-8	NA	73644990	73689515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73645043_73653169_73653216_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374
transcript_43752.known	chr14	-	2602	1	FSM	ENSG00000176903.5	ENST00000316836.5	2602	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCTCATTTTTCT	-3	True	NA	-3	True	ATTAAA	-16	NA	73714384	73711782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73711800_73714400
transcript_43758.known	chr14	-	5261	16	FSM	ENSG00000187097.13	ENST00000334696.11	5261	16	0	0	0	0	multi-exon	TRUE	canonical	1	19	junction_4	7.64954610127657	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGTCTTCCTTCGAAG	-3	True	NA	0	True	AATAAA	-19	NA	74019288	73963229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73967015_73970009_73970126_73971851_73971909_73972883_73973025_73973876_73973979_73974923_73974986_73975935_73976016_73976323_73976413_73977023_73977060_73977298_73977375_73983017_73983162_73986813_73986894_73987885_73988173_74011090_74011151_74015823_74015931_74019249
transcript_43774.known	chr14	+	2623	12	FSM	ENSG00000119725.21	ENST00000555044.6	2623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_10	28.7813070648926	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATAGTTTTTTTAAAA	11	True	NA	NA	False	AATAAA	-25	NA	73886858	73932521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_43779.known	chr14	+	1961	12	FSM	ENSG00000119725.21	ENST00000556396.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	52.0590891231356	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCATTCTGACTGT	49	False	NA	NA	False	NA	NA	NA	73886807	73931840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_4378.known	chr1	-	686	5	FSM	ENSG00000236200.7	ENST00000439057.6	948	5	30	232	24	-83	multi-exon	FALSE	canonical	1	1	junction_4	2.58602010819715	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATGTCTACTAAAAATAC	0	True	NA	NA	False	NA	NA	NA	43707341	43699922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43700064_43702655_43702729_43703563_43703648_43704352_43704458_43707058
transcript_43785.known	chr14	+	2109	12	FSM	ENSG00000119723.17	ENST00000334571.7	2109	12	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	6.68042657122685	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATGTTTGGTGGCAGA	-11	True	NA	NA	False	NA	NA	NA	73950301	73963670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_43789.known	chr14	+	3113	12	FSM	ENSG00000119636.16	ENST00000394009.5	3113	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2.60641294306026	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGTCACTTTCAAT	-6	True	NA	NA	False	AATAAA	-15	NA	74019348	74066092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74019535_74022915_74023145_74029183_74029250_74034027_74034172_74040564_74040646_74046059_74046131_74047929_74048075_74049701_74050196_74055583_74055686_74056905_74056981_74057143_74057259_74064687
transcript_43791.known	chr14	-	5462	12	FSM	ENSG00000119711.13	ENST00000553458.6	5462	12	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_3	25.2805743213347	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTTTGTATTTTA	21	False	74084474	NA	False	AATGAA	-27	NA	74084453	74056846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_43801.known	chr14	+	2293	11	FSM	ENSG00000119725.21	ENST00000324593.10	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	36.3236837338946	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	46	False	NA	13	True	AATAAA	-17	NA	73886804	73932278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_4381.nic	chr1	-	690	3	ISM	ENSG00000236200.7	ENST00000659644.2	3391	4	-19	3555	-19	0	5prime_fragment	FALSE	canonical	1	1	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGCTATAACAAACTTAG	3298	False	NA	NA	False	NA	NA	NA	43707390	43703394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_43703648_43704352_43704458_43707058
transcript_4382.known	chr1	-	416	2	FSM	ENSG00000236200.7	ENST00000418149.2	466	2	41	9	35	-9	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATAACTCGTTGCCGTT	11	True	NA	NA	False	AATATA	-19	NA	43707330	43704313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43704458_43707058
transcript_43820.known	chr14	+	2765	10	FSM	ENSG00000140043.12	ENST00000555661.6	2765	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	21.1945718650604	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCATCTTATACTCTGC	-4	True	NA	NA	False	AGTAAA	-15	NA	73851830	73885726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_43824.known	chr14	+	2543	10	FSM	ENSG00000140043.12	ENST00000555228.5	2543	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	38.5672412646462	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGAATGTTTTGGCTT	9	True	NA	6	True	AGTAAA	-14	NA	73851843	73885456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73852005_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_43828.known	chr14	+	2559	10	FSM	ENSG00000140043.12	ENST00000267568.8	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	43.9564880251616	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTTTGGCTTATG	3	True	NA	9	True	AGTAAA	-17	NA	73851946	73885459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73852121_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_4383.known	chr1	-	486	2	FSM	ENSG00000288573.2	ENST00000446167.2	800	2	299	15	-16	2	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCCTACCAAAATCATG	297	False	NA	NA	False	ATTAAA	-18	NA	43946302	43944369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43944797_43946243
transcript_4384.known	chr1	+	3883	20	FSM	ENSG00000117408.11	ENST00000372343.8	3883	20	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_5	15.9844106879657	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGCATACATTTATTTA	1	True	NA	13	True	ATTAAA	-17	NA	43946949	43968022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745_43958890_43960248_43960330_43960875_43961014_43961165_43961263_43964268_43964322_43966574_43966642_43966723_43966783_43966929_43967020_43967314_43967497_43967585
transcript_43868.known	chr14	+	689	6	FSM	ENSG00000119636.16	ENST00000464394.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	1.78885438199983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCTCTCATTTAGACTT	-2	True	NA	NA	False	NA	NA	NA	74019352	74048074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74019535_74029183_74029250_74034027_74034172_74040564_74040646_74046059_74046131_74047929
transcript_43871.known	chr14	+	558	5	FSM	ENSG00000119723.17	ENST00000555552.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	40.1458279276938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGTTCCAGTTTCTCCA	-3	True	NA	NA	False	NA	NA	NA	73950309	73956482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73956428
transcript_43873.known	chr14	+	649	5	FSM	ENSG00000119723.17	ENST00000554920.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	38.4341970125564	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTCTTCTTTGCT	-5	True	NA	11	True	AATAAA	-18	NA	73950307	73963112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73962969
transcript_43882.nic	chr14	+	784	4	ISM	ENSG00000140043.12	ENST00000555661.6	2765	10	-23	11259	-23	-160	5prime_fragment	FALSE	canonical	3	113	junction_1	32.5678778348646	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTTAATTCATGTATGT	NA	False	NA	NA	False	AATAAA	-31	NA	73851807	73874467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022
transcript_43896.known	chr14	+	550	4	FSM	ENSG00000119636.16	ENST00000463558.3	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTAGTCCTTGTTTTCTC	-4	True	NA	NA	False	AATAAA	-19	NA	74019447	74040817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74019535_74029183_74029250_74034027_74034172_74040564
transcript_43898.known	chr14	-	452	4	FSM	ENSG00000187097.13	ENST00000557681.1	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	14.522013940528	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTATTTGTTGATAAC	14	True	NA	NA	False	CATAAA	-24	NA	74019271	74008929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74009193_74011090_74011151_74015823_74015931_74019249
transcript_43900.known	chr14	-	726	4	FSM	ENSG00000119711.13	ENST00000556852.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	24.3447461820136	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGACTTTTGGGAAGGAC	-17	True	NA	NA	False	NA	NA	NA	74084447	74071877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74072365_74072536_74072612_74074954_74075018_74084346
transcript_43902.known	chr14	-	164	1	FSM	ENSG00000273711.2	ENST00000613926.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGTAGTTCCTGAACAT	1232	False	NA	NA	False	AATAAA	-17	NA	73885555	73885391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73885400_73885600
transcript_43903.known	chr14	+	2461	13	FSM	ENSG00000119725.21	ENST00000398139.7	2461	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	71.3482753042349	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	23	False	NA	13	True	AATAAA	-17	NA	73886870	73932278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904930_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73927106_73927229_73931502
transcript_43904.known	chr14	+	2193	11	FSM	ENSG00000119725.21	ENST00000334521.8	2193	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	54.5718792053197	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTCCTTTAAATAAACAAAA	5145	False	NA	-18	True	TTTAAA	-32	NA	73892024	73932247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73892108_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_43905.known	chr14	-	691	4	FSM	ENSG00000187097.13	ENST00000555829.5	691	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.1334630345285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGGCTAATGCTACCCA	NA	False	NA	NA	False	AATAAA	-22	NA	73972934	73961083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73961551_73970009_73970126_73971851_73971909_73972883
transcript_43910.known	chr14	+	585	6	FSM	ENSG00000205659.12	ENST00000554076.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	73.6711612505192	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAGGAAAGATACACAC	0	True	NA	NA	False	ATTAAA	-22	NA	74084962	74114295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74114005
transcript_43911.nnic	chr14	+	635	6	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	-42	4001	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	76.7098429147134	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATTCAATCTGATTCA	NA	False	NA	NA	False	AATAAA	-19	NA	74084913	74118296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74118005
transcript_43912.nnic	chr14	+	718	6	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	-42	5934	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_5	75.1888289574987	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGCTTCCCTTTTAA	NA	False	NA	NA	False	CATAAA	-15	NA	74084913	74120229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74119855
transcript_43914.nnic	chr14	+	901	6	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	-42	14355	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	76.3292866467387	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTGTGGCTGGGTGCA	NA	False	NA	NA	False	AGTAAA	-14	NA	74084913	74128650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74128093
transcript_43916.known	chr14	+	1798	6	FSM	ENSG00000205659.12	ENST00000555028.7	2874	6	-3	1079	-3	-24	multi-exon	FALSE	canonical	3	142	junction_1	26.0076911701135	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-10	True	NA	NA	False	NA	NA	NA	74084952	74200414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74198921
transcript_4393.known	chr1	+	944	7	FSM	ENSG00000117410.14	ENST00000236067.8	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	559.309519755286	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCAGCTTCTGTT	9	True	NA	22	True	AATAAA	-15	NA	43974947	43978289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43975108_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_43930.nic	chr14	-	2234	18	NIC	ENSG00000119688.21	novel	3035	19	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_17	107.45717743687	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-3	True	NA	-31	True	ATTAAA	-3	NA	74302979	74285995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74302874
transcript_43933.nnic	chr14	-	2118	17	NIC	ENSG00000119688.21	novel	1842	18	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_16	101.938400517175	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-15	True	NA	-31	True	ATTAAA	-3	NA	74302991	74285995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74302874
transcript_4396.known	chr1	+	2466	6	FSM	ENSG00000132768.14	ENST00000255108.8	2466	6	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	16.6973051717934	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	10	True	NA	23	True	AATAAA	-15	NA	43970009	43973369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_43979.known	chr14	-	3035	19	FSM	ENSG00000119688.21	ENST00000356924.9	3035	19	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_17	92.5881795244637	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCTCACTGTAAA	1	True	NA	NA	False	AATAAA	-22	NA	74302934	74285268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74300149_74300269_74302874
transcript_43980.known	chr14	-	2336	17	FSM	ENSG00000119688.21	ENST00000481935.5	2336	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_15	90.2205630662988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTAAACATTAAAAAGA	-2	True	NA	25	True	NA	NA	NA	74302937	74286013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_43981.known	chr14	-	594	4	FSM	ENSG00000119688.21	ENST00000477803.5	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	55.1502996869061	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGCAGTCGTTTTCAAAT	-11	True	NA	NA	False	NA	NA	NA	74302987	74297835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74298070_74299547_74299676_74300149_74300269_74302874
transcript_43987.nnic	chr14	-	668	4	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.0678160675491	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGCTTTTCTCTTGTTA	NA	False	NA	NA	False	ATTAAA	-19	NA	74349989	74314115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_74314295_74326060_74326221_74327570_74327674_74349763
transcript_43989.nnic	chr14	-	908	4	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.0678160675491	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTTTGATTTTTTTGG	NA	False	NA	-1	True	NA	NA	NA	74349989	74325343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_74325763_74326060_74326221_74327570_74327674_74349763
transcript_43991.nnic	chr14	-	774	4	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	27.0678160675491	240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTACTTCTAGTTTT	NA	False	NA	-39	True	CATAAA	-21	NA	74349989	74325477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_74325763_74326060_74326221_74327570_74327674_74349763
transcript_43997.known	chr14	+	3408	2	FSM	ENSG00000133980.5	ENST00000256362.5	3408	2	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_1	0	3073	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGTCTCTGGTATTT	0	True	NA	37	True	AATAAA	-18	NA	74348470	74360008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74348653_74356782
transcript_44004.known	chr14	-	431	1	FSM	ENSG00000270000.1	ENST00000602790.1	431	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCTGAGATTTTAAATA	7866	False	NA	NA	False	AATAAA	-20	NA	74472360	74471929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74471900_74472400
transcript_44033.known	chr14	-	583	4	FSM	ENSG00000119655.11	ENST00000554482.1	583	4	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	1138.84239471491	3423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGCTGTGGTCTTCT	5522	False	NA	-10	True	AATAAA	-27	NA	74493242	74479941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74480289_74480701_74480780_74486328_74486437_74493192
transcript_44034.known	chr14	-	729	5	FSM	ENSG00000119655.11	ENST00000553490.5	729	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1112.52977488245	2158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTAGGTGGTTTCATT	-2	True	NA	-69	True	NA	NA	NA	74493339	74480081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74480289_74480685_74480780_74484414_74484588_74486328_74486437_74493192
transcript_44035.known	chr14	+	2581	4	FSM	ENSG00000165898.14	ENST00000556816.6	2581	4	0	0	0	0	multi-exon	FALSE	canonical	1	327	junction_3	262.024595961694	3372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	74493764	74497106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74493846_74494049_74494153_74494274_74494391_74494825
transcript_44036.known	chr14	+	489	3	FSM	ENSG00000165898.14	ENST00000554924.1	489	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	408.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGCCACTATTATTTT	5	True	NA	77	True	NA	NA	NA	74493764	74495130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74493846_74494049_74494153_74494825
transcript_44037.known	chr14	-	5417	20	FSM	ENSG00000119682.18	ENST00000356357.9	5417	20	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_17	7.49182379816255	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGAGTGAGTGGCTGCT	12	True	NA	-8	True	AATAAA	-13	NA	74713080	74661255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
transcript_44038.known	chr14	-	5409	20	FSM	ENSG00000119682.18	ENST00000681099.1	5409	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_16	14.8549776206766	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTAAGGAGTGAGTG	-16	True	NA	-14	True	AATAAA	-7	NA	74713108	74661261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684483_74684681_74685599_74685661_74692040_74692329_74712932
transcript_44039.known	chr14	-	2196	13	FSM	ENSG00000119682.18	ENST00000469797.5	2196	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	7.46473189218623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTAAAATATAAGCTAA	25	False	NA	NA	False	NA	NA	NA	74713067	74670641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
transcript_44047.nnic	chr14	+	1693	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-23	1410	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_8	62.7076550350912	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	NA	False	NA	29	True	AATAAA	-27	NA	74713120	74736714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735551_74736315
transcript_44049.nnic	chr14	+	1907	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-142	1510	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	62.7076550350912	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCCTGCCCTCAAGAC	NA	False	NA	129	True	AATAAA	-35	NA	74713001	74736814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735604_74736373
transcript_4405.known	chr1	+	2414	6	FSM	ENSG00000132768.14	ENST00000495421.1	2414	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	112.838645862134	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	10	True	NA	23	True	AATAAA	-15	NA	43970009	43973369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43970271_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_44050.nnic	chr14	+	1807	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-142	1410	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	62.7076550350912	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	NA	False	NA	29	True	AATAAA	-27	NA	74713001	74736714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735604_74736373
transcript_44056.nnic	chr14	+	1809	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	-23	1410	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	62.7076550350912	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGATATTCTGATGATTGC	NA	False	NA	29	True	AATAAA	-27	NA	74713120	74736714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735671_74736319
transcript_44064.known	chr14	+	4341	8	FSM	ENSG00000119616.11	ENST00000341162.8	4341	8	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	31.4636168244128	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAATTCTATTTTTTTGG	-27	True	NA	18	True	AATAAA	-20	NA	74713143	74738620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881
transcript_44069.nic	chr14	+	1363	2	ISM	ENSG00000119616.11	ENST00000554590.5	574	6	0	18027	0	-8553	5prime_fragment	FALSE	canonical	3	99	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAACTTTAGATTTTT	-27	True	NA	NA	False	NA	NA	NA	74713143	74714790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_74713201_74713484
transcript_44070.known	chr14	+	794	8	FSM	ENSG00000119616.11	ENST00000534938.6	794	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	43.7002778677011	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGAGATATTTATTATT	-1	True	NA	NA	False	NA	NA	NA	74713169	74735040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74713260_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881
transcript_44071.known	chr14	+	8195	21	FSM	ENSG00000119596.18	ENST00000325680.12	8195	21	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	41.8775297743313	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTATTTTCATTGCTTA	-47	True	NA	NA	False	ATTAAA	-27	NA	74763315	74837318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74797579_74799698_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
transcript_44074.known	chr14	+	4899	20	FSM	ENSG00000119596.18	ENST00000552421.5	4899	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	65.16214593733	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCCTTTTCTCTTGTTT	3	True	NA	37	True	AATAAA	-42	NA	74763365	74836190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74764363_74778446_74778684_74780404_74780585_74781333_74782326_74802555_74802677_74809379_74809798_74809909_74810003_74810224_74810421_74811619_74811739_74812627_74812783_74816202_74816266_74816570_74816691_74816930_74817108_74817193_74817278_74818230_74818315_74821056_74821138_74824255_74824308_74829212_74829344_74835264_74835448_74835774
transcript_44075.known	chr14	+	2085	2	FSM	ENSG00000119596.18	ENST00000549197.1	2085	2	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTAATAAGCTATTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	74834897	74837309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74835448_74835774
transcript_44076.known	chr14	+	2813	15	FSM	ENSG00000119689.15	ENST00000334220.9	2813	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	3.99297853124962	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	-10	True	NA	8	True	ATTAAA	-18	NA	74881915	74903743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892987_74893347_74893425_74894311_74894410_74898368_74898500_74899922_74899997_74900288_74900373_74901065_74901234_74902195
transcript_44079.nnic	chr14	+	690	9	NNC	ENSG00000119689.15	novel	2813	15	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	7.24461006542105	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	-3	True	NA	8	True	ATTAAA	-18	NA	74881889	74903743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892924_74903649
transcript_44083.known	chr14	+	1365	7	FSM	ENSG00000119689.15	ENST00000555071.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	3.09569593683445	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTAAGCCTAAGTCAAC	-4	True	NA	NA	False	NA	NA	NA	74881921	74892058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055
transcript_44087.known	chr14	+	565	3	FSM	ENSG00000119689.15	ENST00000556190.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAGTAAAAGCATAAAA	-1	True	NA	NA	False	NA	NA	NA	74881924	74886024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74882017_74882590_74882625_74885585
transcript_44088.nic	chr14	+	845	2	ISM	ENSG00000119689.15	ENST00000556190.5	565	3	-35	2716	-1	-2716	5prime_fragment	FALSE	canonical	3	19	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTATGGCTAGCAG	-3	True	NA	NA	False	NA	NA	NA	74881889	74883308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_74882017_74882590
transcript_44089.known	chr14	-	1626	7	FSM	ENSG00000198208.12	ENST00000553894.6	1626	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	7.05730511991338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-11	True	NA	NA	False	NA	NA	NA	74923255	74910889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74911381_74911793_74911842_74918512_74918606_74919844_74919970_74921276_74921562_74921977_74922486_74923179
transcript_44091.nic	chr14	-	817	2	ISM	ENSG00000198208.12	ENST00000553894.6	1626	7	-35	10890	12	-264	5prime_fragment	FALSE	canonical	3	22	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAGAAAACAGAATCC	0	True	NA	NA	False	NA	NA	NA	74923290	74921779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_74922486_74923179
transcript_44092.nic	chr14	-	1137	3	ISM	ENSG00000119630.14	ENST00000555567.6	1740	7	9045	0	1663	0	3prime_fragment	FALSE	canonical	3	21	junction_2	2	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGATCTAGTGGGTGTGT	9081	False	NA	-5	True	AATAAA	-18	NA	74946552	74941833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_74942734_74946212_74946276_74946378
transcript_44094.known	chr14	+	4304	8	FSM	ENSG00000119718.11	ENST00000266126.10	4304	8	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_6	21.2900283260133	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTTTGTAAAGACACT	-25	True	NA	NA	False	AATAAA	-16	NA	75002920	75012366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736_75004901_75005865_75005962_75006576_75006715_75007721_75007789_75009030
transcript_44095.known	chr14	+	772	4	FSM	ENSG00000119718.11	ENST00000555522.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	11.2644968324772	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATCAAGTAAAACATTAAG	-13	True	NA	NA	False	NA	NA	NA	75002932	75005017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736
transcript_44096.known	chr14	-	7820	13	FSM	ENSG00000119684.16	ENST00000355774.7	7820	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	16.1681700331924	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCCTTCCATCCCTCT	-12	True	NA	-11	True	AATAAA	-15	NA	75051467	75013774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75033418_75033491_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_44099.known	chr14	-	7819	12	FSM	ENSG00000119684.16	ENST00000380968.6	7819	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	18.252589536649	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCATCCCTCTCTTCAT	NA	False	NA	-5	True	AATAAA	-21	NA	75051532	75013768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_44103.known	chr14	-	616	2	FSM	ENSG00000119684.16	ENST00000553263.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGACTGGAGTTTGAG	NA	False	NA	NA	False	NA	NA	NA	75051504	75049168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75049719_75051438
transcript_44114.known	chr14	-	650	4	FSM	ENSG00000119640.9	ENST00000357971.7	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	136.355743879343	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	9	True	NA	-37	True	AATAAA	-16	NA	75064015	75053242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75053660_75061683_75061763_75063469_75063562_75063953
transcript_44115.known	chr14	-	639	4	FSM	ENSG00000119640.9	ENST00000555135.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	142.698594558212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTAGCATAATATCCTC	17	True	NA	-99	True	NA	NA	NA	75064007	75059847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75060262_75061683_75061763_75063469_75063562_75063953
transcript_44119.known	chr14	-	3357	4	FSM	ENSG00000119638.14	ENST00000555405.5	3357	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	17.3781471969828	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTACTGTGCTTCAGTAA	NA	False	NA	-21	True	AATAAA	-16	NA	75091685	75082120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269
transcript_44120.known	chr14	+	1509	3	FSM	ENSG00000119703.15	ENST00000439583.2	1509	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	-16	True	NA	21	True	ATTAAA	-15	NA	75069640	75078089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75069750_75070554_75071397_75077531
transcript_44121.known	chr14	+	2249	3	FSM	ENSG00000119703.15	ENST00000238686.8	2249	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACAGGGTAGGGATGGG	NA	False	NA	NA	False	AATAAA	-18	NA	75069576	75078423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75069750_75070554_75071739_75077531
transcript_44122.known	chr14	+	3923	3	FSM	ENSG00000119703.15	ENST00000524913.3	3923	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTTCCCTTTAATCT	-16	True	NA	NA	False	AATAAA	-16	NA	75069640	75079988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75069750_75070554_75071912_75077531
transcript_44127.known	chr14	-	565	3	FSM	ENSG00000119640.9	ENST00000555694.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	158.5	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-3	True	NA	-37	True	AATAAA	-16	NA	75064027	75053242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75053660_75063469_75063562_75063971
transcript_44128.known	chr14	-	4109	5	FSM	ENSG00000170348.9	ENST00000303575.9	4109	5	0	0	0	0	multi-exon	FALSE	canonical	3	1826	junction_2	132.52735566667	4140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGTGTACTGTTACTC	3	True	NA	-32	True	AATAAA	-16	NA	75176612	75131468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75135007_75135759_75135887_75147663_75147738_75152031_75152144_75176354
transcript_44129.known	chr14	+	2104	4	FSM	ENSG00000170345.10	ENST00000303562.9	2104	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	5.35412613473634	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTTGTGCTCTTTTCA	0	True	NA	13	True	AATAAA	-21	NA	75278827	75282230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75279124_75279876_75280129_75280559_75280668_75280782
transcript_4413.known	chr1	+	1738	5	FSM	ENSG00000132768.14	ENST00000396758.6	1738	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	143.49651563714	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAACCTAAATAAACCAGA	25	True	NA	-6	True	NA	NA	NA	43970024	43973340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43972157_43972335_43972414
transcript_44130.known	chr14	+	940	3	FSM	ENSG00000259687.3	ENST00000558575.2	940	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTATTTCAAATTCCACCC	3	True	NA	NA	False	NA	NA	NA	75294406	75296863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75294542_75294676_75294738_75296119
transcript_44132.known	chr14	+	4716	32	FSM	ENSG00000119685.20	ENST00000298832.14	4716	32	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	17.364549387826	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTTCCCTTTA	0	True	NA	4	True	AATAAA	-16	NA	75661245	75955079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
transcript_44134.known	chr14	+	1595	10	FSM	ENSG00000119685.20	ENST00000286650.9	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	49.7142451701673	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32	True	NA	NA	False	NA	NA	NA	75661277	75709828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75709178
transcript_44137.known	chr14	+	3629	10	FSM	ENSG00000119686.10	ENST00000238667.9	3629	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	10.2632028788938	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGCCTTATCATTCA	4	True	NA	6	True	AATAAA	-14	NA	75578619	75648167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75579642_75622078_75622221_75624611_75624753_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
transcript_44150.known	chr14	+	1008	10	FSM	ENSG00000119650.13	ENST00000679083.1	1008	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	151.302085205903	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	-17	True	NA	17	True	AATAAA	-17	NA	75985752	76083741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75986125_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_44161.known	chr14	+	816	9	FSM	ENSG00000119650.13	ENST00000314067.11	816	9	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	41.1187305251512	1579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	-7	True	NA	18	True	AATAAA	-18	NA	75985762	76083742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_44162.known	chr14	+	848	4	FSM	ENSG00000119650.13	ENST00000556742.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	32.2214559295855	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGTTTGAAACTCA	14	True	NA	7	True	AATAAA	-15	NA	75985783	76059271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641
transcript_44163.known	chr14	+	816	8	FSM	ENSG00000119650.13	ENST00000238628.10	816	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	181.445331059428	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTTCTTTCCAGTCTC	12	True	NA	22	True	AATAAA	-22	NA	75985781	76083746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76076596_76076692_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_44164.known	chr14	+	1102	9	FSM	ENSG00000119650.13	ENST00000554026.5	1102	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	171.476674798644	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGATAATTCAATTGCAA	10	True	NA	15	True	AATAAA	-24	NA	75985779	76083701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76076596_76076692_76082294_76082693_76083226_76083290_76083457
transcript_44170.nnic	chr14	+	3253	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-15	-2475	intron_retention	FALSE	canonical	3	13	junction_9	54.9080038690981	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGTATTCCTGTTT	-30	True	NA	12	True	ATTAAA	-16	NA	76151900	76199532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76197668
transcript_44171.nnic	chr14	+	1522	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-15	-2475	intron_retention	FALSE	canonical	2	6	junction_9	57.0219797344805	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGTATTCCTGTTT	-30	True	NA	12	True	ATTAAA	-16	NA	76151900	76199532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199399
transcript_44172.nnic	chr14	+	1873	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-15	-1644	intron_retention	FALSE	canonical	3	19	junction_9	53.1015798049152	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTAGGGTAGTGCTT	-30	True	NA	6	True	AATAAA	-14	NA	76151900	76200363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199879
transcript_44173.known	chr14	+	14021	10	FSM	ENSG00000089916.18	ENST00000261530.12	14021	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	36.3440351211707	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTCCTCTGCCAT	-9	True	NA	-13	True	NA	NA	NA	76151921	76214343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76201690
transcript_44187.nic	chr14	+	1309	5	ISM	ENSG00000089916.18	ENST00000554125.5	6248	6	-33	6173	-15	-186	5prime_fragment	FALSE	canonical	3	160	junction_1	20.4496332485451	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTCATTACAGTGTCTA	-30	True	NA	NA	False	AATAAA	-45	NA	76151900	76173849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_44188.nic	chr14	+	1495	5	ISM	ENSG00000089916.18	ENST00000554125.5	6248	6	-33	5987	-15	0	5prime_fragment	FALSE	canonical	3	160	junction_1	20.4496332485451	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACTG	-30	True	NA	NA	False	NA	NA	NA	76151900	76174035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_44194.known	chr14	+	529	2	FSM	ENSG00000089916.18	ENST00000557207.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAACTTGGTCTTGTTT	-1	True	NA	NA	False	GATAAA	-17	NA	76151929	76153002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_76151992_76152535
transcript_44195.known	chr14	+	1458	5	FSM	ENSG00000089916.18	ENST00000557263.5	1458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.9348388796892	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACTG	-9	True	NA	NA	False	NA	NA	NA	76151921	76174035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_76151976_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_44196.known	chr14	+	1791	11	FSM	ENSG00000089916.18	ENST00000554375.5	1791	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	77.9718538961336	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGATCATGTTGTGGGAA	-15	True	NA	NA	False	NA	NA	NA	76151915	76202007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177891_76177932_76178207_76178323_76180763_76180850_76195877_76195973_76201690
transcript_44197.known	chr14	+	6248	6	FSM	ENSG00000089916.18	ENST00000554125.5	6248	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	72.6404845798815	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATACAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	76151933	76180022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76176691_76177891
transcript_44198.nnic	chr14	+	484	2	NNC	ENSG00000258454.1	novel	520	3	NA	NA	22438	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGCACAGTGACTGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	76258254	76263503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_76258435_76263199
transcript_44200.known	chr14	-	5287	10	FSM	ENSG00000013523.11	ENST00000251089.8	5287	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	15.7511512414839	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAGAATTTTCAGAT	-26	True	NA	NA	False	ATTAAA	-18	NA	76812882	76786008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_76789389_76790610_76790775_76791296_76791367_76803370_76803482_76803785_76803913_76806415_76806850_76807432_76807503_76807921_76808149_76809058_76809644_76812763
transcript_44205.known	chr14	-	1684	2	FSM	ENSG00000258301.3	ENST00000556072.2	1684	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTGTGCTGGTCTCCAC	NA	False	NA	1	True	AATAAA	-18	NA	76786724	76781732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_76782777_76786084
transcript_44206.nnic	chr14	+	902	3	Genic_Genomic	ENSG00000243225.2	novel	463	1	NA	NA	-82377	38	multi-exon	FALSE	non_canonical	0	0	junction_1	0	849	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTAAAACCATGTCTCT	NA	False	NA	NA	False	AATATA	-21	NA	76886305	76969183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_+_76886686_76968541_76968918_76969037
transcript_44208.nnic	chr14	+	1055	3	Genic_Genomic	ENSG00000243225.2	novel	463	1	NA	NA	-82377	38	multi-exon	FALSE	non_canonical	0	0	junction_1	0	861	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTAAAACCATGTCTCT	NA	False	NA	NA	False	AATATA	-21	NA	76886305	76969183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_+_76886839_76968541_76968918_76969037
transcript_44212.nnic	chr14	+	1065	3	Genic_Genomic	ENSG00000243225.2	novel	463	1	NA	NA	-82371	38	multi-exon	FALSE	non_canonical	0	0	junction_1	0	847	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTAAAACCATGTCTCT	NA	False	NA	NA	False	AATATA	-21	NA	76886311	76969183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_+_76886878_76968564_76968918_76969037
transcript_44215.nnic	chr14	-	1048	3	Genic_Genomic	ENSG00000241081.1	novel	374	1	NA	NA	-82433	65	multi-exon	FALSE	non_canonical	0	0	junction_1	0	847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATTTTCTCTCTAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	76969183	76886311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_-_76886823_76968526_76968918_76969037
transcript_44217.known	chr14	-	980	2	FSM	ENSG00000258819.2	ENST00000658895.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTAATCTGTTATG	NA	False	NA	NA	False	AATAAA	-28	NA	77076392	77073906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77074599_77076104
transcript_44219.known	chr14	+	1004	8	FSM	ENSG00000165548.11	ENST00000554766.5	1004	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	2.1946130708196	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCAAAGCTCAGCTGGC	3984	False	NA	NA	False	NA	NA	NA	77181622	77231730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77181898_77196070_77196231_77213445_77213509_77218800_77218964_77219497_77219578_77220005_77220088_77225423_77225462_77231587
transcript_4422.known	chr1	-	2044	4	FSM	ENSG00000285649.1	ENST00000647729.1	2044	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCTATAGCCCTCCTC	NA	False	NA	NA	False	AATACA	-13	NA	43974821	43968350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43969644_43970040_43970308_43973363_43973469_43974442
transcript_44220.known	chr14	+	4325	4	FSM	ENSG00000198894.8	ENST00000361786.7	4325	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	7.58653778449403	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTTTTGCTTTATA	-27	True	NA	10	True	AATAAA	-21	NA	77098257	77117287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113424
transcript_44226.nnic	chr14	-	1231	4	NNC	ENSG00000177108.5	novel	3408	3	NA	NA	-79	-2336	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	50.6776303927307	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGACTCACTACAACCT	NA	False	NA	-15	True	CATAAA	-22	NA	77141870	77133605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_77133949_77136466_77136547_77139212_77139753_77141602
transcript_44229.known	chr14	-	3408	3	FSM	ENSG00000177108.5	ENST00000319374.4	3408	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	2	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATGATTGTATGGGC	-3	True	NA	-20	True	AATAAA	-21	NA	77141791	77131269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77133949_77139212_77139753_77141602
transcript_4423.known	chr1	+	987	8	FSM	ENSG00000117410.14	ENST00000472174.7	987	8	0	0	0	0	multi-exon	FALSE	canonical	3	1505	junction_7	62.9330710244735	11064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	21	True	NA	28	True	AATAAA	-21	NA	43974959	43978295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_44231.nic	chr14	-	957	2	ISM	ENSG00000177108.5	ENST00000319374.4	3408	3	-79	7794	-79	346	5prime_fragment	FALSE	canonical	3	120	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAATTTTTTAGTATAA	NA	False	NA	-18	True	AATAAA	-42	NA	77141870	77139063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_77139753_77141602
transcript_44233.known	chr14	+	1010	10	FSM	ENSG00000100577.19	ENST00000361389.8	1010	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	65.5557438792022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAAATCCTGCCCCGTT	561	False	NA	NA	False	NA	NA	NA	77320995	77331195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77322546_77322733_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_4424.nic	chr1	+	2070	7	NIC	ENSG00000117411.18	novel	360	2	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	248.289929092762	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	3890	False	NA	14	True	AGTAAA	-14	NA	43978904	43991168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43979084_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_44243.known	chr14	+	1186	9	FSM	ENSG00000100577.19	ENST00000216465.10	1186	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	19.3002590656188	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGTCTAAGACTGA	-6	True	NA	22	True	ATTAAA	-19	NA	77321035	77331597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_44254.known	chr14	+	867	8	FSM	ENSG00000100577.19	ENST00000349555.7	867	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	53.0832999604761	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGTGGGCAGGAATAC	590	False	NA	-69	True	NA	NA	NA	77321024	77331393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_44259.known	chr14	+	919	8	FSM	ENSG00000100577.19	ENST00000556627.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.6788302271524	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATCTATGTGACGGGGC	-4	True	NA	-49	True	NA	NA	NA	77321037	77331413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_4426.known	chr1	+	2629	7	FSM	ENSG00000117411.18	ENST00000356836.10	2629	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	243.846718703005	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCCCTTGTCTGTTTG	188	False	NA	14	True	AGTAAA	-14	NA	43979876	43991168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43980615_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_44264.known	chr14	+	873	8	FSM	ENSG00000100577.19	ENST00000557639.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	50.4946956195825	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAAACTTGTTCCAC	585	False	NA	NA	False	NA	NA	NA	77321019	77331320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_44269.known	chr14	+	580	7	FSM	ENSG00000100577.19	ENST00000557053.5	580	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	71.0416544477018	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGGCACAGGGCCACAGG	36	False	NA	NA	False	NA	NA	NA	77321077	77331211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77326837_77326906_77327471_77327553_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_4427.known	chr1	+	2004	7	FSM	ENSG00000117411.18	ENST00000309519.8	2004	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.511920319617	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCCTTGTCTGTTTGGG	0	True	NA	16	True	AGTAAA	-16	NA	43979935	43991170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43980047_43981108_43981474_43981688_43981925_43984864_43985056_43985277_43985401_43985516_43985622_43990297
transcript_44276.known	chr14	-	7761	6	FSM	ENSG00000100580.8	ENST00000216468.8	7761	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	9.2	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAACATCTGAGTTAT	-11	True	NA	-14	True	AATAAA	-16	NA	77377094	77335028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77341989_77343177_77343484_77343696_77343824_77346348_77346479_77351672_77351752_77376935
transcript_44278.known	chr14	+	412	3	FSM	ENSG00000100583.5	ENST00000533095.2	412	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATCAAACTAAATTACT	732	False	NA	NA	False	NA	NA	NA	77376688	77391268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77376741_77380382_77380482_77391007
transcript_4428.known	chr1	+	360	2	FSM	ENSG00000117411.18	ENST00000498543.1	360	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCTAGCAGCAGCAGCA	22	False	NA	NA	False	NA	NA	NA	43978942	43981327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43979084_43981108
transcript_44280.known	chr14	-	2761	21	FSM	ENSG00000151445.16	ENST00000343765.6	2761	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	28.7288617943698	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	21	True	NA	-15	True	AATAAA	-24	NA	77457561	77426674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457094_77457366_77457494
transcript_44281.known	chr14	-	2530	20	FSM	ENSG00000151445.16	ENST00000557658.6	2530	20	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_12	10.5323666819209	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-19	True	NA	-15	True	AATAAA	-24	NA	77457601	77426674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
transcript_44282.known	chr14	-	1623	19	FSM	ENSG00000151445.16	ENST00000448935.6	1623	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_16	24.9799919935936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGAGTCATGAGAATG	-4	True	NA	NA	False	NA	NA	NA	77457586	77427419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77453298_77453402_77454009_77454103_77457494
transcript_44289.known	chr14	+	1173	9	FSM	ENSG00000100591.8	ENST00000535854.6	1173	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	294.200160392546	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGAGATGGGGTCCTAC	158	False	NA	NA	False	NA	NA	NA	77458031	77468760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77468589
transcript_44290.known	chr14	+	1337	9	FSM	ENSG00000100591.8	ENST00000216479.8	1337	9	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	51.8095973252061	5201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	13	True	NA	39	True	AATAAA	-17	NA	77458092	77469472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_44295.known	chr14	+	1048	9	FSM	ENSG00000100591.8	ENST00000555133.5	1048	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	280.06249302611	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCAGCGGCAGGGGACT	-4	True	NA	NA	False	ATTAAA	-32	NA	77457869	77469247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77457983_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_4430.known	chr1	-	3206	14	FSM	ENSG00000196517.13	ENST00000372310.8	3206	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	11.0512523052726	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	13	True	NA	0	True	AATGAA	-21	NA	44031462	43996482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
transcript_44301.known	chr14	+	787	4	FSM	ENSG00000100591.8	ENST00000556963.5	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_2	9.39266853573691	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCTGTCTCTACAAAAA	93	False	NA	NA	False	NA	NA	NA	77458216	77463101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641
transcript_44303.known	chr14	+	588	3	FSM	ENSG00000100591.8	ENST00000554156.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_2	11.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATAGCCCAGGCTTGG	159	False	NA	NA	False	NA	NA	NA	77458032	77462319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77458270_77459615_77459807_77462159
transcript_44305.known	chr14	-	8034	12	FSM	ENSG00000100596.8	ENST00000216484.7	8034	12	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_2	21.1327953977299	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTTTATTCATTCA	24	True	NA	0	True	AATAAA	-16	NA	77616637	77505996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77512404_77518037_77518168_77521445_77521582_77552095_77552223_77555299_77555520_77557040_77557147_77562395_77562490_77570383_77570509_77576766_77576916_77578954_77579110_77597185_77597381_77616447
transcript_44312.known	chr14	-	2597	6	FSM	ENSG00000100601.10	ENST00000216489.8	2597	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	9.26066952223218	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGCTAGGTTCTTTG	-4	True	NA	-10	True	AATAAA	-21	NA	77708023	77672403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_44313.known	chr14	-	649	5	FSM	ENSG00000100601.10	ENST00000555100.1	649	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	44.7045858945142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATCCAGAAGGGGAAGG	9568	False	NA	NA	False	NA	NA	NA	77707992	77674102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77674242_77675655_77675795_77679879_77679971_77704368_77704478_77707821
transcript_44314.known	chr14	-	1750	5	FSM	ENSG00000100601.10	ENST00000557057.5	1750	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	35.27304211434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	9	True	NA	-45	True	AATAAA	-34	NA	77708010	77673074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77704368_77704478_77707821
transcript_44316.nic	chr14	-	747	4	NIC	ENSG00000100601.10	novel	497	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	41.515726605174	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATACCTTTTTTTT	9514	False	NA	NA	False	AATAAA	-16	NA	77708046	77691732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_77691983_77694737_77694901_77704368_77704478_77707821
transcript_44318.nic	chr14	-	1100	2	ISM	ENSG00000100601.10	ENST00000555100.1	649	5	-54	29500	-23	-11870	5prime_fragment	FALSE	canonical	3	105	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGCTGGACGCAG	9514	False	NA	NA	False	NA	NA	NA	77708046	77703602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_77704478_77707821
transcript_4432.known	chr1	-	1881	12	FSM	ENSG00000196517.13	ENST00000475075.6	1881	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	22.0371587015287	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGACGGCTGCTGTCA	-12	True	NA	NA	False	NA	NA	NA	44031386	43997442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44024247_44024363_44031305
transcript_44323.known	chr14	+	471	5	FSM	ENSG00000119705.10	ENST00000555890.5	471	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	6736.54329014518	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTTGTCTAAATGTT	19	False	NA	25	True	AATAAA	-13	NA	77708113	77717593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710554_77710666_77710837_77710897_77715771_77715880_77717495
transcript_44330.known	chr14	+	445	3	FSM	ENSG00000119705.10	ENST00000554074.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7612.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATAGGTATTTGTGT	26	False	NA	NA	False	ATTAAA	-13	NA	77708120	77712038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710837_77710897_77711740
transcript_44331.known	chr14	+	729	3	FSM	ENSG00000119705.10	ENST00000556831.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	13904	junction_2	662.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCGGTGGTAGGCCAGG	24	False	NA	NA	False	AAAAAG	-3	NA	77708118	77716351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710837_77710897_77715771
transcript_44332.known	chr14	+	865	4	FSM	ENSG00000119705.10	ENST00000557623.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	6882.34761303632	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGCTGAGATATAAAATT	8	True	NA	NA	False	AATATA	-17	NA	77708102	77721107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77720515
transcript_44333.known	chr14	+	285	4	FSM	ENSG00000119705.10	ENST00000553981.1	285	4	0	0	0	0	multi-exon	FALSE	canonical	3	941	junction_2	6282.1247644054	2301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAAATGTTTTTAT	83	False	NA	30	True	AATAAA	-18	NA	77708177	77717598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710837_77710881_77715771_77715880_77717495
transcript_44334.known	chr14	-	2129	14	FSM	ENSG00000100603.14	ENST00000261531.12	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_13	63.9697598675717	2115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTTATGTTAACTTT	-5	True	NA	-26	True	AATAAA	-16	NA	77761156	77717598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_44335.known	chr14	-	602	5	FSM	ENSG00000100603.14	ENST00000557663.1	602	5	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_4	70.0178548657412	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCAGCTTGGGGGGTCA	-5	True	NA	NA	False	NA	NA	NA	77761156	77738737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_44340.known	chr14	+	3268	11	FSM	ENSG00000063761.16	ENST00000238561.10	3268	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	8.09011742807235	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGGTTACTTGCTTTT	-10	True	NA	NA	False	AGTAAA	-23	NA	77800108	77935014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_44346.known	chr14	+	1972	10	FSM	ENSG00000063761.16	ENST00000341211.5	1972	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.7921072437181	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	20	True	NA	17	True	AATAAA	-17	NA	77800138	77933952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_44357.known	chr14	+	3381	6	FSM	ENSG00000021645.20	ENST00000557594.5	3381	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	4.16653333119993	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAACAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-35	NA	79279338	79862478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_79280539_79467220_79467403_79663777_79663950_79697629_79697938_79805111_79805191_79861038
transcript_44359.nic	chr14	+	2360	2	ISM	ENSG00000021645.20	ENST00000634499.2	5412	22	0	1617516	0	-400979	5prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATTGGCAAATTT	-3	True	NA	NA	False	AAAAAG	-15	NA	78170372	78244448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_78170675_78242390
transcript_4436.known	chr1	+	1472	9	FSM	ENSG00000159214.13	ENST00000372318.8	1472	9	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	39.0398434295016	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	0	True	NA	16	True	ATTAAA	-18	NA	43991598	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43991747_43991846_43992005_43992211_43992388_43992522_43992640_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44363.nic	chr14	-	2571	13	ISM	ENSG00000100629.17	ENST00000555265.6	4614	25	-55	333686	-55	0	5prime_fragment	FALSE	canonical	3	25	junction_5	6.23776580373311	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGCAATGGTAATTA	NA	False	NA	NA	False	AATAAA	-17	NA	80941793	80830164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812_80904932_80905954_80906082_80914321_80914409_80916400_80916563_80939384_80939541_80941580
transcript_44366.nic	chr14	-	1443	2	ISM	ENSG00000100629.17	ENST00000557411.5	528	4	-9	23930	-9	7310	5prime_fragment	FALSE	canonical	3	42	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAACACTGTGTATTAAG	3	True	NA	NA	False	NA	NA	NA	80941728	80938245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_80939541_80941580
transcript_44367.known	chr14	-	6343	9	FSM	ENSG00000165417.12	ENST00000553612.6	6343	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	4.48434777866302	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATTTTGCAGTTTAA	-4	True	NA	0	True	AATAAA	-25	NA	81220959	81175451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81180331_81185530_81185621_81192518_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
transcript_44369.known	chr14	+	1130	2	FSM	ENSG00000273783.2	ENST00000618431.1	1130	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTAATTCATTTAATA	1718	False	NA	6	True	TATAAA	-17	NA	81221217	81222460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_81221526_81221638
transcript_44374.nnic	chr14	-	620	3	NNC	ENSG00000140022.14	novel	11084	9	NA	NA	-13	-26080	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	11	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGATATGGTGTC	-14	True	NA	NA	False	AATAAA	-20	NA	81436478	81424452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_81424804_81427101_81427213_81436320
transcript_44375.nnic	chr14	+	666	2	Antisense	novelGene_ENSG00000270343.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGGAGCAAATCATTGCT	NA	False	NA	NA	False	AATAAA	-16	NA	81256770	81271260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_81256908_81270731
transcript_44377.known	chr14	-	751	3	FSM	ENSG00000258675.2	ENST00000657354.1	751	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAATTTTTACTTATCC	NA	False	NA	NA	False	AATAAA	-21	NA	81450365	81441999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81442197_81442365_81442443_81449888
transcript_44379.known	chr14	-	7919	21	FSM	ENSG00000071537.14	ENST00000336735.9	7919	21	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_15	20.4242502922384	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCCCACTGCCTCC	-13	True	NA	NA	False	TATAAA	-19	NA	81533853	81471546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81477182_81479611_81479741_81484224_81484398_81485671_81485747_81486288_81486455_81487389_81487539_81487854_81487943_81489251_81489315_81490387_81490466_81492479_81492549_81495080_81495138_81497891_81498047_81498412_81498495_81499458_81499519_81499608_81499663_81502720_81502884_81504200_81504307_81506073_81506242_81526732_81526965_81527700_81527739_81533674
transcript_44384.known	chr14	-	594	5	FSM	ENSG00000071537.14	ENST00000557372.1	594	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	96.6190974911275	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATGTATCAAACTGGAAT	-9	True	NA	NA	False	NA	NA	NA	81533849	81504262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81504307_81506073_81506179_81526732_81526965_81527700_81527739_81533674
transcript_44385.nic	chr14	-	745	5	ISM	ENSG00000071537.14	ENST00000555824.5	1631	8	-46	5397	-26	58	5prime_fragment	FALSE	canonical	3	179	junction_1	33.138912172852	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTAGGTAGCACTGCTA	-39	True	NA	NA	False	AAGAAA	-11	NA	81533879	81504204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_81504307_81506073_81506242_81526732_81526965_81527700_81527739_81533674
transcript_44387.nic	chr14	-	560	3	ISM	ENSG00000071537.14	ENST00000557372.1	594	5	-30	22385	-26	-22385	5prime_fragment	FALSE	canonical	3	242	junction_1	13.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTCACTGATTATTAC	-39	True	NA	NA	False	AATAAA	-15	NA	81533879	81526647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_81526965_81527700_81527739_81533674
transcript_44388.nnic	chr14	-	611	5	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9590	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	54.2557600628726	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	9607	False	NA	-2	True	AATAAA	-28	NA	81613474	81605341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_81605555_81607131_81607199_81607623_81607702_81608316_81608446_81613350
transcript_44391.nnic	chr14	-	484	4	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9588	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	47.6934656600531	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	9605	False	NA	-2	True	AATAAA	-28	NA	81613476	81605341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_81605555_81607131_81607199_81607623_81607702_81613350
transcript_44392.nnic	chr14	-	459	4	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9578	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	38.7900330841141	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	9595	False	NA	-2	True	AATAAA	-28	NA	81613486	81605341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_81605555_81607131_81607199_81607623_81607702_81613385
transcript_44393.known	chr14	-	789	4	FSM	ENSG00000258977.2	ENST00000653859.1	789	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.9402178562449	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	NA	False	NA	-2	True	AATAAA	-28	NA	81623086	81605341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81605555_81607131_81607199_81607623_81607699_81622652
transcript_44396.nnic	chr14	-	405	3	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9589	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	60	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	9606	False	NA	-2	True	AATAAA	-28	NA	81613475	81605341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_81605555_81607131_81607199_81613350
transcript_44397.nnic	chr14	-	368	3	NNC	ENSG00000258977.2	novel	789	4	NA	NA	9591	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_2	43	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTCACAATGCATTGA	9608	False	NA	-2	True	AATAAA	-28	NA	81613473	81605341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_81605555_81607131_81607199_81613385
transcript_44399.known	chr14	-	1199	3	FSM	ENSG00000258977.2	ENST00000554211.2	1199	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACAATGCATTGATTAA	17	False	NA	2	True	AATAAA	-32	NA	81623064	81605337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81605555_81607131_81607702_81622652
transcript_44400.known	chr14	-	1209	3	FSM	ENSG00000258977.2	ENST00000670489.1	1209	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAATTTCACAATGC	NA	False	NA	-7	True	AATAAA	-23	NA	81623086	81605346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81605555_81607131_81607699_81622652
transcript_44403.known	chr14	+	639	5	FSM	ENSG00000258743.7	ENST00000690424.1	791	5	5	147	0	8	multi-exon	FALSE	canonical	2	4	junction_3	1.11803398874989	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGAATTTCTGATGTGGG	-2	True	NA	NA	False	AAAAAG	-8	NA	82642619	82695192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_82642675_82650923_82650997_82685379_82685432_82687313_82687370_82694789
transcript_44409.known	chr14	+	1118	3	FSM	ENSG00000258743.7	ENST00000553760.6	1118	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTCAAAATTGAGGAATT	NA	False	NA	NA	False	ACTAAA	-39	NA	82642604	82658089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_82642675_82650923_82650997_82657114
transcript_4441.known	chr1	+	1659	8	FSM	ENSG00000159214.13	ENST00000490563.5	1659	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	38.8655453100159	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	67	False	NA	16	True	ATTAAA	-18	NA	43991665	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43991747_43991846_43992388_43992522_43992640_43993839_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44410.known	chr14	+	169	3	FSM	ENSG00000258743.7	ENST00000556970.1	169	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTACCATTGCTGTAAAG	14	False	NA	NA	False	NA	NA	NA	82642635	82687370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_82642675_82650923_82650997_82687313
transcript_44411.known	chr14	+	1294	2	FSM	ENSG00000258743.7	ENST00000670297.1	1294	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTACATGGGTTTTGA	0	True	NA	NA	False	ATTAAA	-2	NA	82642621	82652164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_82642675_82650923
transcript_44414.known	chr14	+	507	2	FSM	ENSG00000259107.2	ENST00000555272.2	507	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTATCTGTTTCTTTGAA	NA	False	NA	NA	False	ATTAAA	-3	NA	85407900	85420054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_85408037_85419683
transcript_44425.known	chr14	+	1795	4	FSM	ENSG00000258733.7	ENST00000654590.2	1852	4	57	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGACATACACATATACACA	-4	True	NA	NA	False	ATTAAA	-35	NA	85934665	86130822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_85934862_86070862_86070968_86127949_86128117_86129495
transcript_44429.known	chr14	-	813	3	FSM	ENSG00000258807.5	ENST00000554519.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAATAAAAAATATTAGA	144	False	NA	NA	False	AATAAA	-3	NA	87816251	87736401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_87736990_87763705_87763811_87816131
transcript_44430.known	chr14	-	3794	17	FSM	ENSG00000054983.17	ENST00000261304.7	3794	17	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	15.4631618694237	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGTCAAATATATTT	-2	True	NA	-2	True	ATTAAA	-18	NA	87993182	87933013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_87934879_87939904_87939982_87941394_87941559_87945552_87945734_87947727_87947879_87949844_87949932_87950658_87950749_87963383_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_44434.known	chr14	-	1221	10	FSM	ENSG00000054983.17	ENST00000622264.4	1221	10	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	16.6733320005331	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTGTTTTACATGTAA	-5	True	NA	-6	True	AATAAA	-14	NA	87993154	87963313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_44435.known	chr14	+	833	4	FSM	ENSG00000258867.7	ENST00000556033.6	838	4	5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAAAGAGACCAGGG	NA	False	NA	NA	False	AATAAA	-15	NA	88024549	88087346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88024670_88025406_88025482_88084036_88084156_88086827
transcript_44438.nnic	chr14	+	916	3	Antisense	novelGene_ENSG00000258975.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACATGTGATCTGATTC	NA	False	NA	NA	False	AATAAA	-21	NA	88142787	88146503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_88143299_88144494_88144619_88146222
transcript_4444.nic	chr1	+	1535	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	16	junction_1	34.2761891530716	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	34	False	NA	16	True	ATTAAA	-18	NA	43991632	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992005_43992211_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44440.known	chr14	-	7501	7	FSM	ENSG00000100433.16	ENST00000340700.9	7501	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.60727512683216	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTTCTGTTTTCCTTT	23	False	NA	NA	False	NA	NA	NA	88326907	88180102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_88186156_88187966_88188110_88192223_88192411_88227374_88227536_88240702_88240821_88263201_88263552_88326418
transcript_44444.nic	chr14	+	2076	13	NIC	ENSG00000042317.17	novel	1410	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_5	23.7814119756493	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTACTTTTCTTCC	NA	False	NA	10	True	AATAAA	-20	NA	88385637	88438455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88415204_88415267_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44448.known	chr14	+	2000	12	FSM	ENSG00000042317.17	ENST00000393545.9	2000	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	15.9684606502064	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	-21	True	NA	15	True	AATAAA	-25	NA	88385656	88438460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44452.nic	chr14	+	1980	12	NIC	ENSG00000042317.17	novel	1410	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	15	junction_4	24.1773748480983	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTACTTTTCTTCC	NA	False	NA	10	True	AATAAA	-20	NA	88385637	88438455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_88385838_88391380_88391456_88396155_88396204_88415204_88415267_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44455.known	chr14	+	1891	11	FSM	ENSG00000042317.17	ENST00000356583.9	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	14.5684590811795	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTACTTTTCTTCCTTT	-10	True	NA	13	True	AATAAA	-23	NA	88385667	88438458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44457.known	chr14	+	890	7	FSM	ENSG00000042317.17	ENST00000555534.5	890	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	24.7144806855324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTGGGGATCTTTTG	-29	True	NA	NA	False	NA	NA	NA	88385648	88426517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88415204_88415267_88416710_88416845_88426231
transcript_44458.known	chr14	+	804	6	FSM	ENSG00000042317.17	ENST00000557248.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	28.4042250378355	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAATCTTTCCTGTCAC	13	False	NA	NA	False	TTTAAA	-7	NA	88385738	88426602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396185_88416710_88416845_88426231
transcript_44459.known	chr14	+	786	6	FSM	ENSG00000042317.17	ENST00000556870.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	27.0747114481392	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTCGAAAGCACCCAG	-34	True	NA	NA	False	NA	NA	NA	88385643	88426504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385838_88391380_88391456_88396155_88396204_88415204_88415267_88416710_88416845_88426231
transcript_44461.known	chr14	+	2301	12	FSM	ENSG00000042317.17	ENST00000556553.5	2301	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.8874772683918	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	NA	False	NA	15	True	AATAAA	-25	NA	88384923	88438460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385062_88385397_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44467.known	chr14	+	2075	15	FSM	ENSG00000100722.20	ENST00000556945.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_10	201.80744510042	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAAGTGTCTAATT	4	True	NA	30	True	AATATA	-32	NA	88563009	88611884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_44468.known	chr14	+	2529	17	FSM	ENSG00000100722.20	ENST00000555755.5	2529	17	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	237.996980022857	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTTAAAATATTTG	-14	True	NA	NA	False	NA	NA	NA	88563037	88611991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603046_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_44469.known	chr14	+	2226	15	FSM	ENSG00000165533.19	ENST00000338104.10	2226	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.5967621168826	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-7	True	NA	11	True	AATAAA	-19	NA	88824655	88877988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88846597_88846676_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_4447.nic	chr1	+	1454	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	13	junction_1	34.9115500448005	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-32	True	NA	16	True	ATTAAA	-18	NA	43991772	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992005_43992152_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44470.known	chr14	+	2183	15	FSM	ENSG00000165533.19	ENST00000380656.7	2183	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.8796448288003	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-12	True	NA	11	True	AATAAA	-19	NA	88824650	88877988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88833692_88833723_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_44472.known	chr14	+	5270	14	FSM	ENSG00000165533.19	ENST00000622513.4	5270	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	16.9911219421223	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTTTTTTTTTT	-39	True	NA	NA	False	ATTAAA	-13	NA	88824623	88881078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_44476.known	chr14	+	2058	13	FSM	ENSG00000165533.19	ENST00000346301.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	12.3524626424585	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	-7	True	NA	11	True	AATAAA	-19	NA	88824655	88877988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_44478.known	chr14	+	1859	12	FSM	ENSG00000165533.19	ENST00000554686.5	1859	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	16.6256796294316	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTTAAAATAAATCATTG	76	False	NA	-21	True	ATTAAA	-21	NA	88824738	88877956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88877293
transcript_44481.known	chr14	+	1342	6	FSM	ENSG00000165533.19	ENST00000354441.10	1342	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.0961056827772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAGCTTTAAAATAAAT	-3	True	NA	-26	True	ATTAAA	-16	NA	88824659	88877951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_44482.known	chr14	+	490	2	FSM	ENSG00000283627.1	ENST00000637466.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTAGACTTGATG	NA	False	NA	NA	False	ACTAAA	-14	NA	89013385	89025807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89013560_89025491
transcript_44484.known	chr14	+	1077	2	FSM	ENSG00000258920.1	ENST00000555562.1	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGTATTGGTTATTAG	522	False	NA	NA	False	NA	NA	NA	89417353	89419793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89417797_89419159
transcript_44485.known	chr14	-	2716	6	FSM	ENSG00000140025.16	ENST00000555872.5	2716	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	72.4966206108947	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGCTGGGCGTGGTGGC	2016	False	NA	NA	False	AATACA	-14	NA	89954557	89795146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
transcript_44488.known	chr14	-	568	6	FSM	ENSG00000140025.16	ENST00000556609.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	73.2846505074562	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTAATTTTTGTG	1796	False	NA	-23	True	ATTAAA	-6	NA	89954777	89797136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954732
transcript_44496.known	chr14	-	3136	6	FSM	ENSG00000140025.16	ENST00000316738.12	3136	6	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_4	14.5794375748861	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGATCAATGGTATCATTG	4	True	NA	NA	False	AATAAA	-20	NA	89954730	89794668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_44497.known	chr14	-	2326	9	FSM	ENSG00000140025.16	ENST00000556639.5	2326	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.5094110317689	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTCAAAATGCTTTA	4	True	NA	NA	False	NA	NA	NA	89954730	89829830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89831217_89833076_89833178_89836424_89836662_89837019_89837146_89931540_89931632_89932525_89932628_89950096_89950139_89953905_89954002_89954585
transcript_44498.known	chr14	-	1870	6	FSM	ENSG00000140025.16	ENST00000538485.6	1870	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	69.7613073271997	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAATAAAACTGTACT	-16	True	NA	NA	False	NA	NA	NA	89954750	89923307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89924678_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_44499.known	chr14	+	3722	17	FSM	ENSG00000042088.14	ENST00000335725.9	3722	17	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	107.025241619676	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	-22	True	NA	18	True	AATAAA	-18	NA	89955926	90044764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89955971_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_4451.nnic	chr1	+	1287	8	NNC	ENSG00000159214.13	novel	1472	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	36.0136028722028	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-32	True	NA	16	True	ATTAAA	-18	NA	43991772	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_43992005_43992319_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44516.known	chr14	+	2068	16	FSM	ENSG00000042088.14	ENST00000393454.6	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	74.2962239207948	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATATGTTTTGGAAA	-11	True	NA	10	True	AATAAA	-19	NA	89955937	90043344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_44517.known	chr14	+	1894	14	FSM	ENSG00000042088.14	ENST00000555880.5	1894	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	122.708920987599	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATTCCTAATAAAGTA	6553	False	NA	-25	True	NA	NA	NA	89963104	90043309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90043069
transcript_44518.known	chr14	-	14008	14	FSM	ENSG00000119720.18	ENST00000354366.8	14008	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	7.83634379182464	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGAGTCTGTCTTGG	13	True	NA	-4	True	AATAAA	-14	NA	90331941	90267859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90278462_90279061_90279134_90286353_90286493_90288216_90289146_90290220_90290608_90292696_90292873_90298259_90298381_90301238_90301373_90302719_90303126_90303934_90304383_90312393_90312544_90316577_90316812_90318004_90318114_90331840
transcript_44521.known	chr14	+	4390	11	FSM	ENSG00000100764.14	ENST00000261303.13	4390	11	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_1	238.590360241146	3838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCAGTATTGCCTTTT	-4	True	NA	NA	False	ATTAAA	-18	NA	90256552	90275429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_44527.known	chr14	+	1389	10	FSM	ENSG00000100764.14	ENST00000543772.2	1389	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	579.537512500323	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCCCATTGGGTGGCC	21	False	NA	NA	False	AAAACA	-27	NA	90256577	90272550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90256601_90259159_90259214_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_44540.known	chr14	+	577	4	FSM	ENSG00000100764.14	ENST00000554624.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_1	364.92038705571	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGTGGATGATCTGAG	0	True	NA	NA	False	NA	NA	NA	90256527	90263670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317
transcript_44544.known	chr14	-	580	4	FSM	ENSG00000119720.18	ENST00000557106.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.3275853524323	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCGAAGTAGGTTGCTG	-15	True	NA	NA	False	AGTAAA	-12	NA	90331969	90316586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90316812_90317703_90317821_90318004_90318114_90331840
transcript_44545.nic	chr14	-	439	3	ISM	ENSG00000119720.18	ENST00000354366.8	14008	14	-142	48865	-114	-138	5prime_fragment	FALSE	canonical	3	37	junction_1	2	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAGGAAGCATCAGC	-2	True	NA	NA	False	AAAAAG	-39	NA	90332083	90316724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_90316812_90318004_90318114_90331840
transcript_44546.known	chr14	-	483	1	FSM	ENSG00000242571.1	ENST00000461458.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGTGTTAAAAAAAATAAT	43	False	NA	NA	False	NA	NA	NA	90367179	90366696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90366700_90367200
transcript_44551.known	chr14	+	1104	7	FSM	ENSG00000198668.14	ENST00000447653.8	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	3999.33063843883	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATGAAAAAA	-1	True	NA	8	True	NA	NA	NA	90397028	90405072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90397234_90398990_90399088_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_44561.known	chr14	+	877	6	FSM	ENSG00000198668.14	ENST00000553542.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	3598.73463317317	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACAGTCAGGCCTTTG	26	False	NA	-16	True	AATACA	-43	NA	90397055	90405048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90397155_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_44565.known	chr14	+	4203	6	FSM	ENSG00000198668.14	ENST00000356978.9	4203	6	0	0	0	0	multi-exon	FALSE	canonical	3	8699	junction_5	425.749691720382	7247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAACTGTGTAGGTTTC	-1	True	NA	39	True	AATAAA	-26	NA	90397028	90408268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_44566.known	chr14	+	1420	5	FSM	ENSG00000198668.14	ENST00000553630.1	1420	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4073.06256857171	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAGTGGTGTTAAATG	10	False	NA	57	True	AATAAA	-11	NA	90397039	90405603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90404378_90404515_90404688
transcript_44567.known	chr14	+	459	1	FSM	ENSG00000213315.5	ENST00000472287.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	365	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	90766530	90766989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90766500_90767000
transcript_44569.known	chr14	-	703	4	FSM	ENSG00000258884.3	ENST00000659138.2	706	4	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGCCTTCTTACTCTTG	NA	False	NA	NA	False	NA	NA	NA	90828199	90820063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90820366_90821686_90821745_90823021_90823154_90827988
transcript_44571.known	chr14	-	26829	17	FSM	ENSG00000100784.12	ENST00000614987.5	26829	17	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_10	5.63713967806369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGACTTGGACTTGTGG	-24	True	NA	NA	False	AATAAA	-24	NA	91060641	90847860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90872323_90873631_90873796_90875200_90875361_90890486_90890679_90894412_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_44574.known	chr14	-	2249	13	FSM	ENSG00000100784.12	ENST00000418736.6	2249	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_6	6.37867541108654	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAAGAGTTGTCTTGG	17	True	NA	NA	False	AATAAA	-24	NA	91060600	90893973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_44581.known	chr14	+	2957	14	FSM	ENSG00000133943.21	ENST00000256324.15	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	18.4823600531992	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAAAGTCTTTTTTTTTG	-9	True	NA	NA	False	CATAAA	-21	NA	91114072	91225632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_44584.nic	chr14	+	2628	14	NIC	ENSG00000133943.21	novel	3075	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	18.259471077325	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	-6	True	NA	23	True	AATAAA	-19	NA	91114369	91225355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_44590.known	chr14	+	959	7	FSM	ENSG00000133943.21	ENST00000518665.6	959	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	43.8422044255178	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAGAGACAGAGATATT	5	True	NA	3	True	AATAAA	-19	NA	91114086	91167721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114284_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91167468
transcript_44591.nic	chr14	+	928	7	NIC	ENSG00000133943.21	novel	834	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	44.9209181661382	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAGAGACAGAGATATT	217	False	NA	3	True	AATAAA	-19	NA	91114362	91167721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_91114529_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91167468
transcript_44595.known	chr14	+	550	5	FSM	ENSG00000133943.21	ENST00000524232.5	550	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	46.5966737010272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTCTGCCAGGTCAAC	-17	True	NA	NA	False	NA	NA	NA	91114064	91167278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114284_91145220_91145314_91157638_91157691_91160265_91160398_91167224
transcript_44597.nic	chr14	+	750	5	NIC	ENSG00000133943.21	novel	3075	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_4	43.1364115336452	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAGAGACAGAGATATT	-6	True	NA	3	True	AATAAA	-19	NA	91114369	91167721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91167468
transcript_44598.nic	chr14	+	681	5	NIC	ENSG00000133943.21	novel	834	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	46.2817458616245	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGCATTACCAACACCCA	-6	True	NA	-11	True	AATAAA	-5	NA	91114369	91167707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91167523
transcript_4460.nnic	chr1	+	1407	7	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-13	0	intron_retention	FALSE	canonical	2	7	junction_1	41.1258231933822	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	36	False	NA	16	True	ATTAAA	-18	NA	43991634	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992005_43992522_43992640_43993839_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44602.nic	chr14	+	842	4	ISM	ENSG00000133943.21	ENST00000518649.5	555	5	-6	13526	0	2	5prime_fragment	FALSE	canonical	3	31	junction_1	35.4400902933387	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAGACAGAGATATTGT	-6	True	NA	5	True	AATAAA	-21	NA	91114369	91167723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224
transcript_44604.nic	chr14	+	563	3	ISM	ENSG00000133943.21	ENST00000523837.5	2814	16	-181	64924	-124	62	5prime_fragment	FALSE	canonical	3	30	junction_1	36.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAAGTTCCT	NA	False	NA	NA	False	NA	NA	NA	91113938	91160431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_91114284_91157638_91157691_91160265
transcript_44605.known	chr14	+	622	3	FSM	ENSG00000133943.21	ENST00000521081.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	36	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAAATACATCCAGCAT	-19	True	NA	NA	False	AAGAAA	-7	NA	91114062	91160369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114529_91157638_91157691_91160265
transcript_44607.known	chr14	+	2764	16	FSM	ENSG00000133943.21	ENST00000523816.5	2764	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	37.0758981310261	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	-6	True	NA	23	True	AATAAA	-19	NA	91114389	91225355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114529_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_44608.known	chr14	+	2538	14	FSM	ENSG00000133943.21	ENST00000428926.6	2538	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.6903484585767	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTCTTCGGAA	3	True	NA	20	True	AATAAA	-16	NA	91114441	91225352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_44609.known	chr14	-	420	4	FSM	ENSG00000015133.20	ENST00000554165.1	420	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	33.6386021641143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGATGAATTTACATCAT	170	False	NA	-117	True	NA	NA	NA	91417678	91384389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91384552_91408658_91408768_91416737_91416839_91417630
transcript_44610.known	chr14	-	550	4	FSM	ENSG00000015133.20	ENST00000553437.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	7.78888096369861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTCATCTTTTGTCTCC	9090	False	NA	NA	False	AATAAA	-42	NA	91408758	91342142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91342464_91343598_91343658_91359641_91359712_91408658
transcript_44615.known	chr14	-	3751	12	FSM	ENSG00000165929.13	ENST00000360594.9	3751	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	8.92484692092719	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTCAGGTACAGAAGT	4	True	NA	NA	False	AATAAA	-31	NA	91836447	91780954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_4462.nnic	chr1	+	1219	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	37.7211994624891	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-32	True	NA	16	True	ATTAAA	-18	NA	43991772	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992005_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44622.known	chr14	-	1770	11	FSM	ENSG00000165929.13	ENST00000556018.5	1770	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	19.630588376307	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCAACCATAGATAG	4765	False	NA	-28	True	AATAAA	-15	NA	91836526	91782822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_44624.nic	chr14	-	866	3	ISM	ENSG00000165929.13	ENST00000556018.5	1770	11	-57	29193	-57	0	5prime_fragment	FALSE	canonical	3	57	junction_2	9.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTCAGAAAAAAAAAAAGA	10	True	NA	NA	False	NA	NA	NA	91836583	91812015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_91812546_91813702_91813826_91836370
transcript_44625.known	chr14	-	656	2	FSM	ENSG00000165929.13	ENST00000554424.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATTCAGAAAAAAAAAAAGA	528	False	NA	NA	False	NA	NA	NA	91813828	91812015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91812546_91813702
transcript_44627.known	chr14	-	2625	11	FSM	ENSG00000140092.15	ENST00000342058.9	2625	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.85227205685164	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTGGTTCATTTT	-12	True	NA	-1	True	ATTAAA	-13	NA	91947694	91869410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91870386_91877486_91877683_91881291_91881419_91882953_91883077_91887192_91887313_91891220_91891338_91894949_91895073_91936946_91937202_91940564_91940617_91942906_91942962_91947212
transcript_44630.nic	chr14	-	3802	11	ISM	ENSG00000100815.12	ENST00000267622.8	9996	21	-2	38559	-2	11283	5prime_fragment	FALSE	canonical	3	38	junction_2	8.37197706638044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCCACTAGATTTGAAAG	-11	True	NA	NA	False	AATAAA	-4	NA	92040061	92004549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_92006449_92007639_92007853_92010985_92011073_92011754_92011796_92014214_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_44635.nic	chr14	-	1555	7	ISM	ENSG00000100815.12	ENST00000267622.8	9996	21	-60	48289	-60	1553	5prime_fragment	FALSE	canonical	3	59	junction_4	3.62476052848859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAGAATTCTTGCCCAGA	NA	False	NA	NA	False	AGTAAA	-45	NA	92040119	92014279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_44636.nic	chr14	-	1470	7	ISM	ENSG00000100815.12	ENST00000267622.8	9996	21	-60	48374	-60	1468	5prime_fragment	FALSE	canonical	3	59	junction_4	3.62476052848859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATGGAAGAATGTGAAAAC	NA	False	NA	NA	False	NA	NA	NA	92040119	92014364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_44637.nic	chr14	-	1356	7	ISM	ENSG00000100815.12	ENST00000267622.8	9996	21	-60	48488	-60	1354	5prime_fragment	FALSE	canonical	3	59	junction_4	3.62476052848859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAACAACTTGAGGATAAA	NA	False	NA	NA	False	AATAGA	-24	NA	92040119	92014478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_44639.nic	chr14	-	1346	3	ISM	ENSG00000100815.12	ENST00000267622.8	9996	21	-60	58719	-60	5831	5prime_fragment	FALSE	canonical	3	62	junction_2	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCATTTCCTGTTATATT	NA	False	NA	NA	False	AATAAA	-16	NA	92040119	92024709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_92025421_92033191_92033254_92039546
transcript_44640.known	chr14	-	769	3	FSM	ENSG00000100815.12	ENST00000555105.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	29.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACATGCCTGTAATCCC	33	False	NA	NA	False	AATACA	-18	NA	92040017	92030540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92030777_92033191_92033254_92039546
transcript_44641.known	chr14	-	9996	21	FSM	ENSG00000100815.12	ENST00000267622.8	9996	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	11.0239511972795	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGACTTTTTCTTTAG	-9	True	NA	0	True	AATAAA	-19	NA	92040059	91965990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91969894_91972716_91972862_91974626_91974744_91975171_91975287_91976107_91976190_91988283_91988384_91993808_91993913_91995351_91995516_91999239_91999434_91999967_92000109_92003418_92006449_92007639_92007853_92010985_92011073_92011754_92011796_92014214_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_44646.known	chr14	-	1205	10	FSM	ENSG00000066427.25	ENST00000340660.10	1205	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	66.1664567586931	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	1	True	NA	-10	True	ATTAAA	-14	NA	92106610	92064093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_44651.known	chr14	-	6713	9	FSM	ENSG00000066427.25	ENST00000429774.6	6713	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	70.428598594605	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	NA	False	NA	-10	True	AATAAA	-20	NA	92106621	92058551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92106528
transcript_44656.known	chr14	-	857	9	FSM	ENSG00000066427.25	ENST00000555958.5	857	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.9318337237898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	0	True	NA	NA	False	NA	NA	NA	92106574	92070937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92071054_92080952_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_44657.known	chr14	-	1259	8	FSM	ENSG00000066427.25	ENST00000502250.5	1259	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	72.9867195076597	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTATCTCTACTTTCC	-8	True	NA	NA	False	NA	NA	NA	92106582	92063880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92106528
transcript_44659.known	chr14	-	803	8	FSM	ENSG00000066427.25	ENST00000555381.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	64.8310205417884	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTGCTCACCATTC	0	True	NA	NA	False	NA	NA	NA	92106574	92070934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92106528
transcript_44672.known	chr14	-	1315	10	FSM	ENSG00000066427.25	ENST00000503767.5	1315	10	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_8	60.7303288275815	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	11	False	NA	-10	True	ATTAAA	-14	NA	92106600	92064093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096673_92096839_92106528
transcript_44673.known	chr14	-	1022	10	FSM	ENSG00000066427.25	ENST00000553309.5	1022	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.3399832635618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	0	True	NA	NA	False	NA	NA	NA	92106574	92070937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92071054_92080952_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_44674.known	chr14	-	936	10	NNC	ENSG00000066427.25	novel	6950	12	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	60.3399832635618	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAAGTAGTTGGTACA	NA	False	NA	NA	False	NA	NA	NA	92106621	92080967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_92080995_92080996_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_44675.known	chr14	-	591	6	FSM	ENSG00000066427.25	ENST00000511362.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	67.6621016522543	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCATGTAGGGAGGCTG	7	True	NA	NA	False	GATAAA	-43	NA	92106567	92090378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92090568_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_44682.known	chr14	-	454	4	FSM	ENSG00000183648.11	ENST00000553514.5	454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1245.41746682254	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTCTTTTCATACAAAG	-23	True	NA	-16	True	AATAAA	-20	NA	92121724	92116121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92116230_92117497_92117643_92118848_92118967_92121641
transcript_44698.known	chr14	-	458	3	FSM	ENSG00000183648.11	ENST00000555441.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1323	1943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	595	False	NA	-20	True	AATAAA	-16	NA	92121404	92116125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92116230_92117497_92117643_92121195
transcript_44699.known	chr14	-	417	3	FSM	ENSG00000183648.11	ENST00000617122.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	43	20973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	190	False	NA	-20	True	AATAAA	-16	NA	92121809	92116125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92116230_92117497_92117643_92121641
transcript_4470.known	chr1	+	860	6	FSM	ENSG00000159214.13	ENST00000486504.5	860	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.1418405428999	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGGCTGTTGGTCTGTCT	-21	True	NA	NA	False	NA	NA	NA	43991783	43996279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43992020_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44703.nnic	chr14	-	1837	2	Antisense	novelGene_ENSG00000100599.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAACGCCGTAAAACAAG	1417	False	NA	NA	False	AAAAAG	-4	NA	92628005	92623610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_92625057_92627614
transcript_44705.known	chr14	-	2115	15	FSM	ENSG00000100600.15	ENST00000393218.6	2115	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	173.179392656333	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCTTAAAAAATAAAGATTT	NA	False	NA	-49	True	NA	NA	NA	92748679	92703843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92741061_92741180_92748488
transcript_44706.known	chr14	-	1980	14	FSM	ENSG00000100600.15	ENST00000334869.9	1980	14	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	47.9414090137623	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	-2	True	NA	-14	True	AATAAA	-21	NA	92748627	92703808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_44708.known	chr14	-	1797	13	FSM	ENSG00000100600.15	ENST00000557434.5	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	138.616276902181	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGATTTATAAC	5	True	NA	-44	True	NA	NA	NA	92748645	92703838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92704362_92704639_92704708_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_44710.known	chr14	-	1728	12	FSM	ENSG00000100600.15	ENST00000555699.5	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	146.095745804417	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCCGACACTGACTT	38	False	NA	-12	True	AATAAA	-23	NA	92748612	92703806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92704362_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_44713.known	chr14	+	2879	13	FSM	ENSG00000066455.13	ENST00000163416.7	2879	13	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	23.0663294773043	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTTTCTAAAATAAT	-32	True	NA	NA	False	AATAAA	-14	NA	92794304	92839947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92837385_92837450_92839365
transcript_44714.known	chr14	+	1985	8	FSM	ENSG00000100604.13	ENST00000216492.10	1985	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	13.8091953983938	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGAATTTTTTCGCCTC	0	True	NA	16	True	AATAAA	-18	NA	92923149	92935285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_92923406_92924198_92924246_92926604_92926699_92927549_92927619_92929716_92929816_92931249_92931703_92932369_92932852_92934800
transcript_44715.known	chr14	-	2407	3	FSM	ENSG00000165943.5	ENST00000298894.5	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	20	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGTCTGTTTTGTTT	-17	True	NA	-20	True	AATAAA	-16	NA	93184897	93182198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93184363_93184558_93184714_93184809
transcript_44717.known	chr14	+	3494	11	FSM	ENSG00000012963.15	ENST00000013070.11	3494	11	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	29.7430664189152	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	-4	True	NA	14	True	AATAAA	-15	NA	93207255	93229215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93207442_93209823_93209958_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_44721.nic	chr14	+	1343	10	NIC	ENSG00000012963.15	novel	3494	11	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	3	33	junction_3	84.8778352314681	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTCCGTCCTCCTCT	-1	True	NA	21	True	AATAAA	-22	NA	93207213	93227118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_93207442_93209823_93209958_93210647_93210709_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_44723.known	chr14	+	1276	10	FSM	ENSG00000012963.15	ENST00000553674.1	1276	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	87.096087139789	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTCCGTCCTCCTCT	-17	True	NA	21	True	AATAAA	-22	NA	93207242	93227118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93207442_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_44735.known	chr14	+	909	2	FSM	ENSG00000153485.6	ENST00000283534.4	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	0	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGCTTGCTTTAAAA	NA	False	NA	7	True	CATAAA	-18	NA	93184950	93187086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93185033_93186259
transcript_44736.known	chr14	+	2373	2	FSM	ENSG00000153485.6	ENST00000415050.3	2373	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGCATTTCTTTTCT	2	True	NA	5	True	AATACA	-18	NA	93185316	93188463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93185486_93186259
transcript_44737.known	chr14	-	1125	2	FSM	ENSG00000170270.5	ENST00000306954.5	1125	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTTTCTT	-11	True	NA	-3	True	AATATA	-14	NA	93207065	93202893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93203783_93206829
transcript_44738.known	chr14	-	398	2	FSM	ENSG00000170270.5	ENST00000556566.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTTTCTTGAGAAATAA	25	True	NA	NA	False	AATAAA	-2	NA	93207029	93203505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93203783_93206908
transcript_44741.nic	chr14	-	349	3	ISM	ENSG00000011114.15	ENST00000298896.7	2621	4	197	7225	141	0	5prime_fragment	FALSE	canonical	3	60	junction_2	3	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAGAACCTCTGGTC	403	False	NA	NA	False	NA	NA	NA	93332895	93294852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_93294938_93295969_93296158_93332819
transcript_44742.nic	chr14	+	1394	6	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	210880	-368	-472	0	3prime_fragment	FALSE	canonical	3	34	junction_1	4.8	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTAGTGTTTTTTCTT	NA	False	NA	5	True	AATAAA	-15	NA	93688520	93707272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_44744.nic	chr14	+	1726	6	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	210880	-700	-472	261	3prime_fragment	FALSE	canonical	3	34	junction_1	4.8	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTATACAATTTAATT	NA	False	NA	4	True	AATAAA	-18	NA	93688520	93707604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_44745.nic	chr14	+	1998	6	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	210880	-972	-472	0	3prime_fragment	FALSE	canonical	3	34	junction_1	4.8	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGCCTGGGGTTT	NA	False	NA	21	True	ATTAAA	-15	NA	93688520	93707876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_4475.nnic	chr1	+	1165	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-43	0	intron_retention	FALSE	canonical	2	7	junction_1	35.3530762452152	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-15	True	NA	16	True	ATTAAA	-18	NA	43992178	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992388_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44750.known	chr14	+	8400	50	FSM	ENSG00000133958.13	ENST00000256339.8	8400	50	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.9958153412442	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTAGTGTTTTTTCTT	-2	True	NA	5	True	AATAAA	-15	NA	93333218	93707272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93333524_93467670_93467792_93474247_93474394_93477557_93477729_93487662_93487756_93496410_93496467_93497156_93497287_93523977_93524043_93528557_93528647_93529285_93529327_93532549_93532579_93537988_93538219_93540659_93540832_93542465_93542697_93571893_93572085_93572692_93572817_93575057_93575199_93577841_93578064_93580148_93580377_93582202_93582345_93586595_93586676_93586759_93586909_93593679_93593838_93597358_93597541_93600568_93600771_93603238_93603419_93612796_93613084_93617121_93617305_93618191_93618355_93621620_93622842_93630800_93630909_93634520_93634638_93637215_93637300_93641144_93641248_93643556_93643698_93646607_93646647_93653741_93653855_93653939_93654026_93655233_93655408_93659192_93659262_93662603_93662715_93673350_93673456_93682616_93682695_93686571_93686662_93688664_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_44751.known	chr14	-	2168	3	FSM	ENSG00000100628.12	ENST00000553883.1	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGCCCAGTGAAGTCC	NA	False	NA	-14	True	AATAAA	-14	NA	93940495	93934166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93934793_93937697_93937852_93939107
transcript_44753.known	chr14	-	2769	9	FSM	ENSG00000089737.18	ENST00000555054.1	2769	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	264.167560461159	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTTAAACTTGATTTC	3	True	NA	10	True	NA	NA	NA	94081202	94050964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079622_94081118
transcript_44754.known	chr14	-	5573	9	FSM	ENSG00000089737.18	ENST00000621632.5	5573	9	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_6	98.6280100934821	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAAAGCAACTCTCCT	3	True	NA	NA	False	AATAAA	-20	NA	94081202	94048286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_4476.nnic	chr1	+	1126	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-40	0	intron_retention	FALSE	canonical	1	4	junction_1	36.5480505636074	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-12	True	NA	16	True	ATTAAA	-18	NA	43992181	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992388_43993839_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44763.known	chr14	+	3911	6	FSM	ENSG00000089723.10	ENST00000203664.10	3911	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	5.16139516022558	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTGTCCTGGCTTCT	-18	True	NA	17	True	ATTAAA	-14	NA	94026339	94048930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94026541_94037379_94037476_94038962_94039082_94043970_94044056_94044585_94044781_94045715
transcript_44768.known	chr14	+	708	3	FSM	ENSG00000089723.10	ENST00000553723.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGCCCCGGTGTTCTGC	20	True	NA	NA	False	AAAAAG	-3	NA	94026377	94039411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94026541_94037379_94037476_94038962
transcript_4477.nnic	chr1	+	1411	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-37	0	intron_retention	FALSE	canonical	3	12	junction_1	33.3622541204877	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	-9	True	NA	16	True	ATTAAA	-18	NA	43992184	43996528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992640_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_44770.known	chr14	-	810	2	FSM	ENSG00000089737.18	ENST00000555324.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_1	0	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGATAATTGGGAGAGA	59	False	NA	NA	False	NA	NA	NA	94081146	94078965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94079748_94081118
transcript_44771.known	chr14	-	5573	8	FSM	ENSG00000089737.18	ENST00000555762.1	5573	8	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_5	105.369708693742	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCATCCTGATTTT	7	True	NA	-16	True	ATTAAA	-16	NA	94081198	94050919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_44777.known	chr14	+	629	6	FSM	ENSG00000165948.11	ENST00000555341.5	629	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	38.2549343222544	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTTCACCCCCTTC	26	False	NA	NA	False	GGGGCT	-24	NA	94081374	94102541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096855_94096966_94097494_94097679_94100738_94100772_94101813_94101976_94102476
transcript_44784.known	chr14	+	647	6	FSM	ENSG00000165948.11	ENST00000553664.1	647	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	61.6311609496365	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGTGTCGGTTCTCTG	16	True	NA	18	True	AATAAA	-16	NA	94081364	94102708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94088247_94088304_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_44789.known	chr14	+	674	5	FSM	ENSG00000165948.11	ENST00000393115.7	674	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.8088901493419	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	23	False	NA	19	True	AATAAA	-17	NA	94081328	94102709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096840_94096966_94100738_94100772_94101813_94101976_94102476
transcript_44790.nic	chr14	+	802	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	50.3655388137564	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	19	True	AATAAA	-17	NA	94081269	94102709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94102060_94102476
transcript_44801.known	chr14	+	406	3	FSM	ENSG00000165948.11	ENST00000554544.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	23	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	38	False	NA	19	True	AATAAA	-17	NA	94081386	94102709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096855_94096966_94102476
transcript_44802.known	chr14	+	647	5	FSM	ENSG00000165948.11	ENST00000555523.6	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	8.22724133595217	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	4	True	NA	19	True	AATAAA	-17	NA	94081309	94102709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_44803.known	chr14	+	413	4	FSM	ENSG00000165948.11	ENST00000557218.5	413	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	59.5371032774241	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	33	False	NA	19	True	AATAAA	-17	NA	94081381	94102709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94102476
transcript_44804.known	chr14	+	571	4	FSM	ENSG00000165948.11	ENST00000554562.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	54.7905101272109	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	19	True	AATAAA	-17	NA	94096906	94102709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94096966_94100738_94100772_94101813_94102060_94102476
transcript_44809.nnic	chr14	+	695	5	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	666	4	NA	NA	-21	0	multi-exon	FALSE	canonical	2	3	junction_2	55.6793274025468	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGAATCTCTTCTTCTCG	NA	False	NA	9	True	AATAAA	-21	NA	94081279	94116695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94096886_94096966_94114850_94114881_94115780_94115943_94116441
transcript_44810.nnic	chr14	+	699	5	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	666	4	NA	NA	-3	0	multi-exon	FALSE	canonical	2	3	junction_2	21.2176223927187	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGAATCTCTTCTTCTCG	1	True	NA	9	True	AATAAA	-21	NA	94081306	94116695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94096855_94096966_94114850_94114881_94115780_94115943_94116441
transcript_44811.known	chr14	+	364	5	FSM	ENSG00000165949.13	ENST00000618200.4	364	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.84767985741633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTCTCCGGATTGACC	10	False	NA	NA	False	NA	NA	NA	94110746	94116447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94110798_94111658_94111774_94114850_94114881_94115780_94115943_94116441
transcript_44812.nnic	chr14	+	619	4	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	666	4	NA	NA	-24	0	multi-exon	FALSE	canonical	1	2	junction_1	4.49691252107735	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGAATCTCTTCTTCTCG	NA	False	NA	9	True	AATAAA	-21	NA	94081276	94116695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94114850_94114881_94115780_94115943_94116441
transcript_44815.nnic	chr14	+	589	3	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	681	2	NA	NA	-24	0	multi-exon	FALSE	canonical	1	2	junction_1	5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGAATCTCTTCTTCTCG	NA	False	NA	9	True	AATAAA	-21	NA	94081276	94116695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94115780_94115943_94116441
transcript_44816.known	chr14	+	644	5	FSM	ENSG00000165949.13	ENST00000621160.5	652	5	13	-5	2	0	multi-exon	FALSE	canonical	1	1	junction_1	4.49305018890286	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGAATCTCTTCTTCTCG	12	False	NA	9	True	AATAAA	-21	NA	94110748	94116695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94110798_94111624_94111774_94114850_94114881_94115780_94115943_94116441
transcript_44818.known	chr14	-	451	4	FSM	ENSG00000119632.4	ENST00000238609.4	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	35.8360464089194	3076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTTTGCTTCTTG	-19	True	NA	-11	True	AATAAA	-18	NA	94129604	94127780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94127993_94128513_94128676_94129261_94129292_94129557
transcript_44820.known	chr14	-	516	3	FSM	ENSG00000119632.4	ENST00000555558.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	1	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTGCTTCTTGCA	277	False	NA	-9	True	AATAAA	-20	NA	94129401	94127778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94127993_94128513_94128676_94129261
transcript_44821.known	chr14	-	676	2	FSM	ENSG00000119632.4	ENST00000554909.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTTTGCTTCTTG	701	False	NA	-11	True	AATAAA	-18	NA	94128977	94127780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94127993_94128513
transcript_44822.known	chr14	-	1486	5	FSM	ENSG00000186910.4	ENST00000334708.4	1486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGGAGCAATCCTTAC	-12	True	NA	0	True	AATAAA	-22	NA	94452800	94442463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94442810_94443077_94443226_94446330_94446605_94448131_94448778_94452728
transcript_44823.known	chr14	+	2278	6	FSM	ENSG00000188488.14	ENST00000329597.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.52380257212004	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAACTGTCTTTATGGA	-12	True	NA	10	True	AATAAA	-18	NA	94581425	94593118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94581491_94581614_94581711_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_44824.known	chr14	+	2211	5	FSM	ENSG00000188488.14	ENST00000554866.5	2211	5	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	3.34477204006491	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTATAACTGTCTTTAT	-3	True	NA	7	True	AATAAA	-15	NA	94581393	94593115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94581491_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_44825.known	chr14	-	1140	3	FSM	ENSG00000133937.5	ENST00000238558.5	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	8	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGGCCACATTCTGTATT	2	True	NA	-8	True	AATAAA	-15	NA	94770113	94768222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94768650_94768957_94769218_94769660
transcript_44830.nic	chr14	+	705	5	NIC	ENSG00000235706.9	novel	817	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	8.72854512504805	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	-6	True	NA	11	True	AATAAA	-23	NA	95157673	95179933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_95157859_95158192_95158235_95158875_95159036_95179498_95179634_95179750
transcript_44831.known	chr14	+	723	4	FSM	ENSG00000235706.9	ENST00000435343.2	817	4	83	11	75	0	multi-exon	FALSE	canonical	3	11	junction_1	1.69967317119759	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	80	False	NA	3	True	AATAAA	-15	NA	95157759	95179925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179503
transcript_44839.nnic	chr14	+	689	3	NIC	ENSG00000235706.9	novel	817	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTTTGGGCTGTCAC	-35	True	NA	9	True	AATAAA	-21	NA	95157644	95179931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_95157859_95158192_95158235_95179498
transcript_44840.nnic	chr14	+	770	3	NIC	ENSG00000235706.9	novel	817	4	NA	NA	-1	0	intron_retention	FALSE	canonical	2	2	junction_1	13	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	-4	True	NA	3	True	AATAAA	-15	NA	95157675	95179925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_95157859_95158875_95159036_95179498
transcript_44843.known	chr14	+	1709	3	FSM	ENSG00000235706.9	ENST00000554631.2	1709	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	12	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	-35	True	NA	11	True	AATAAA	-23	NA	95157644	95179933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95159036_95179498_95179634_95179750
transcript_44852.known	chr14	+	1103	2	FSM	ENSG00000182512.5	ENST00000331334.5	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	1517	junction_1	0	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTCGAGCCCTGGTCT	8	True	NA	14	True	ATTAAA	-14	NA	95535049	95544714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95535385_95543946
transcript_44854.known	chr14	-	981	2	FSM	ENSG00000247092.8	ENST00000554169.2	1375	2	394	0	-10	0	multi-exon	FALSE	canonical	3	99	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAGGATCAGTAACAAA	3	True	NA	NA	False	NA	NA	NA	95534245	95532633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95533062_95533692
transcript_44855.known	chr14	-	428	2	FSM	ENSG00000247092.8	ENST00000553559.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	NA	False	NA	-36	True	ATTAAA	-14	NA	95534872	95532913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95533062_95534592
transcript_44856.known	chr14	-	221	2	FSM	ENSG00000247092.8	ENST00000555866.5	221	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	-9	True	NA	-36	True	ATTAAA	-14	NA	95534586	95532913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95533062_95534513
transcript_44861.known	chr14	+	1142	4	FSM	ENSG00000213231.13	ENST00000340722.8	1142	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	6.64997911442	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	-1	True	NA	11	True	ATTAAA	-18	NA	95686425	95692628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95686630_95690735_95690907_95691267_95691337_95691930
transcript_44863.known	chr14	+	1724	3	FSM	ENSG00000213231.13	ENST00000464815.5	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	1	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	11	False	NA	11	True	ATTAAA	-18	NA	95686437	95692628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95686630_95690735_95690907_95691267
transcript_44864.known	chr14	-	1391	4	FSM	ENSG00000100721.11	ENST00000554012.5	1391	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTCCTTTGGA	NA	False	NA	79	True	AATAAA	-14	NA	95714196	95709966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95710882_95711753_95711803_95712219_95712397_95713946
transcript_44865.nnic	chr14	-	1080	3	Antisense	novelGene_ENSG00000250366.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	3	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTTTTGAGTCTGAT	NA	False	NA	NA	False	NA	NA	NA	95975695	95920169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_95920810_95921434_95921513_95975333
transcript_44870.nnic	chr14	-	715	3	Antisense	novelGene_ENSG00000250366.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	2	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATCTTACCAGTTCTG	NA	False	NA	-10	True	AATAAA	-19	NA	95975809	95920855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_95921017_95921434_95921513_95975333
transcript_44873.known	chr14	+	2930	2	FSM	ENSG00000250366.4	ENST00000504119.1	2930	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATACTCGATGTCTT	0	True	NA	15	True	AATAAA	-18	NA	95876391	95925562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95876540_95922780
transcript_44874.known	chr14	+	3197	2	FSM	ENSG00000250366.4	ENST00000503525.2	3197	2	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	0	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGATGTCTTTTCTTTCAA	1	True	NA	24	True	AATAAA	-27	NA	95876771	95925571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95877178_95922780
transcript_44875.nnic	chr14	-	798	2	Antisense	novelGene_ENSG00000250366.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTTTTGAGTCTGAT	NA	False	NA	NA	False	NA	NA	NA	95975491	95920169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_95920810_95975333
transcript_44878.known	chr14	+	774	3	FSM	ENSG00000227051.7	ENST00000556728.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	41.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTCTGTGTCTGGTTC	15	True	NA	11	True	AAGAAA	-6	NA	96039371	96093887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96039528_96086510_96086763_96093521
transcript_44881.nnic	chr14	+	862	3	NNC	ENSG00000227051.7	novel	536	3	NA	NA	-17	-45765	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGGCAGAATCTGCCC	-12	True	NA	NA	False	AATAAA	-18	NA	96039344	96041042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_96039528_96040210_96040368_96040520
transcript_44882.known	chr14	+	7627	2	FSM	ENSG00000227051.7	ENST00000555004.3	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCTGATGCTTTTCC	5	True	NA	95	True	TTTAAA	-21	NA	96039361	96093971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96039528_96086510
transcript_44883.known	chr14	+	2140	3	FSM	ENSG00000100744.15	ENST00000438650.5	2140	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	212.5	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTGTTTCCATTTTT	NA	False	NA	24	True	GATAAA	-12	NA	96363451	96387286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96363569_96382246_96382506_96385522
transcript_44885.known	chr14	+	2169	4	FSM	ENSG00000100744.15	ENST00000555181.6	2169	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	56.2217830461547	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGTTTCCATTTTTTA	1	True	NA	26	True	GATAAA	-14	NA	96363525	96387288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96363569_96379687_96379789_96382246_96382506_96385522
transcript_44887.known	chr14	+	3283	18	FSM	ENSG00000140057.9	ENST00000267584.9	3283	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	7.27797074269249	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTCTGGCTTCTTTC	-9	True	NA	16	True	AATAAA	-19	NA	96392127	96489427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96392260_96398074_96398264_96404756_96404866_96408846_96408942_96420821_96420933_96437834_96437916_96442729_96442819_96446516_96446608_96449801_96449880_96451420_96451571_96456346_96456476_96458082_96458213_96471477_96471607_96472686_96472756_96478464_96478663_96482998_96483220_96486897_96487057_96488304
transcript_44896.nnic	chr14	+	794	3	NNC	ENSG00000140057.9	novel	601	3	NA	NA	-29	1108	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGGGGCTGTGTTGGA	-8	True	NA	10	True	ATTAAA	-17	NA	96392098	96400400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_96392260_96398074_96398611_96400303
transcript_44897.known	chr14	+	1345	2	FSM	ENSG00000140057.9	ENST00000555570.1	1345	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGCATCCCCTCCAGAC	-4	True	NA	NA	False	AATAAA	-16	NA	96392132	96399292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96392260_96398074
transcript_44903.known	chr14	-	1512	1	FSM	ENSG00000260806.1	ENST00000569214.1	1512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTAGTTC	456	False	NA	NA	False	AAAAAG	-39	NA	96502321	96500809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_96500800_96502300
transcript_44904.known	chr14	+	3264	9	FSM	ENSG00000090060.19	ENST00000557320.5	3264	9	0	0	0	0	multi-exon	FALSE	canonical	3	1962	junction_7	93.3109720236586	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTGTATTTTTTA	-10	True	NA	8	True	AATAAA	-9	NA	96502400	96534885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510
transcript_44905.known	chr14	+	2173	12	FSM	ENSG00000090060.19	ENST00000618976.2	2173	12	0	0	0	0	multi-exon	TRUE	canonical	3	1207	junction_11	375.925876287879	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTCTCTGTGTTTT	-35	True	NA	5	True	ATTAAA	-18	NA	96502375	96537901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975
transcript_44906.known	chr14	+	4515	22	FSM	ENSG00000090060.19	ENST00000216277.13	4515	22	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_21	456.193881088794	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCCTGATTTCTTTTG	-29	True	NA	17	True	AATAAA	-21	NA	96502381	96567116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_44907.known	chr14	+	1421	7	FSM	ENSG00000090060.19	ENST00000557471.5	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2070	junction_3	74.1681647788771	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTAATGTTGTTTTTTT	30	True	NA	NA	False	ATTAAA	-8	NA	96502440	96532248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474
transcript_44908.known	chr14	+	848	6	FSM	ENSG00000090060.19	ENST00000554130.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	867.871096419278	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGAAGAGTATGTAGTA	1	True	NA	7	True	AATAAA	-20	NA	96502411	96531728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96527429_96527540_96527952_96528007_96531474
transcript_44909.known	chr14	+	892	6	FSM	ENSG00000090060.19	ENST00000553461.1	892	6	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_5	355.921564393056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGTATTTTTTATTTT	NA	False	NA	12	True	AATAAA	-13	NA	96527441	96534889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490
transcript_4491.known	chr1	+	482	2	FSM	ENSG00000230615.8	ENST00000623351.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTAATCCCAGCTACTC	12	True	NA	NA	False	AATACA	-26	NA	44030442	44040273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44030558_44039906
transcript_44910.known	chr14	+	2267	20	FSM	ENSG00000090060.19	ENST00000553689.5	2267	20	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_4	501.628030955651	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAACCTCAGGGGTCC	-13	True	NA	-2	True	AATAAA	-18	NA	96502397	96565048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_44911.known	chr14	+	644	5	FSM	ENSG00000090060.19	ENST00000556283.1	644	5	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_1	92.3644276764599	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGATTGGGTTTGTCAGG	NA	False	NA	NA	False	AGTAAA	-24	NA	96542728	96555950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846
transcript_44912.known	chr14	+	2449	3	FSM	ENSG00000258702.4	ENST00000665251.1	2449	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	96592749	96595743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96592816_96593120_96593250_96593489
transcript_44913.known	chr14	+	2716	2	FSM	ENSG00000258702.4	ENST00000662143.1	2716	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23	False	NA	NA	False	NA	NA	NA	96592787	96595743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96593250_96593489
transcript_44915.known	chr14	+	430	4	FSM	ENSG00000258979.3	ENST00000556669.1	430	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAATTGGCATTGATTG	NA	False	NA	NA	False	AATAAA	-17	NA	96741190	96790613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96741212_96744160_96744270_96753268_96753327_96790371
transcript_44916.known	chr14	+	1719	14	FSM	ENSG00000100749.9	ENST00000681355.1	1719	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	332.751839938187	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCAGAGTGGATAAAAAT	29	True	NA	-63	True	NA	NA	NA	96797412	96881516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96832430_96832611_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_44919.known	chr14	+	1681	13	FSM	ENSG00000100749.9	ENST00000679758.1	1681	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	341.326171799872	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTCATTTCAAAATAAT	-10	True	NA	NA	False	AAAAAG	-15	NA	96797373	96945418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96943516_96943681_96945048
transcript_44920.known	chr14	+	1682	13	FSM	ENSG00000100749.9	ENST00000680683.1	1682	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	261.89834488892	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTATGTTGTGGCTG	-4	True	NA	26	True	AATAAA	-23	NA	96797379	96881605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881155
transcript_44921.known	chr14	+	1202	10	FSM	ENSG00000100749.9	ENST00000679736.1	1202	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	289.800101389617	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTAGCAAGTTACTA	1	True	NA	NA	False	AATAAA	-18	NA	96797384	96860922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
transcript_44922.known	chr14	+	1634	13	FSM	ENSG00000100749.9	ENST00000680849.1	1634	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	257.709569520075	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTATGTTGTGGCTGT	21	True	NA	27	True	AATAAA	-24	NA	96797404	96881606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837815_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_44923.known	chr14	+	1070	11	FSM	ENSG00000100749.9	ENST00000680348.1	1070	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	354.480535431778	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACCTCAGTGTTGTGGA	11	True	NA	NA	False	ACTAAA	-29	NA	96797394	96860681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852836_96852944_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556
transcript_44924.known	chr14	+	947	9	FSM	ENSG00000100749.9	ENST00000680339.1	947	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	393.030453654675	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATTTTGTTATTAAATT	NA	False	NA	NA	False	AAAACA	-10	NA	96833466	96860735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96833632_96837761_96837818_96846094_96846165_96847261_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
transcript_44929.known	chr14	-	423	1	FSM	ENSG00000232573.1	ENST00000417615.1	423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	446	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGGAACAGATTTTGCA	NA	False	NA	-81	True	AAGAAA	-31	NA	98973301	98972878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_98972900_98973300
transcript_44930.known	chr14	-	2856	13	FSM	ENSG00000183576.13	ENST00000331768.10	2856	13	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	29.3300187521249	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTATTCCTTTT	4	True	NA	-6	True	ATTAAA	-17	NA	99480859	99397747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_99399126_99400098_99400260_99404224_99404311_99405204_99405372_99406515_99406591_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_44938.known	chr14	-	1330	9	FSM	ENSG00000183576.13	ENST00000329331.7	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	110.726013203763	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATCTTTTTTCTTTGT	3	True	NA	-1	True	AATAAA	-18	NA	99480788	99409803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_99410216_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_44947.known	chr14	+	811	5	FSM	ENSG00000090061.17	ENST00000555842.1	811	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.2016724367238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAAAGATATCA	8	True	NA	NA	False	AAGAAA	-5	NA	99481424	99495547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_99481480_99491945_99492321_99492625_99492875_99493513_99493596_99495497
transcript_44948.nic	chr14	+	595	4	ISM	ENSG00000090061.17	ENST00000557441.5	936	7	-11	6765	-8	0	5prime_fragment	FALSE	canonical	3	6	junction_1	11.1455023315337	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATGTAAAGATATCA	-16	True	NA	NA	False	AAGAAA	-5	NA	99481400	99495547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_99481615_99492625_99492875_99493513_99493596_99495497
transcript_4495.nic	chr1	+	1671	12	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	119.697345607388	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	NA	False	NA	18	True	AATAGA	-15	NA	44213438	44220673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_44213528_44213708_44213859_44214349_44214442_44214538_44214617_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_44950.known	chr14	+	936	7	FSM	ENSG00000090061.17	ENST00000557441.5	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	7.93725393319377	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCATGTATAGGAGATG	-5	True	NA	NA	False	AATACA	-14	NA	99481411	99502312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_99481615_99492625_99492875_99493513_99493596_99495497_99495630_99500765_99500872_99501355_99501414_99502206
transcript_44952.known	chr14	+	2241	8	FSM	ENSG00000182218.10	ENST00000357223.2	2241	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	11.4481974340852	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTTCTCAGCCCTTAGA	11	False	NA	NA	False	AATAAA	-20	NA	99645142	99669277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_99645463_99652223_99652871_99656999_99657144_99659427_99659757_99660279_99660407_99662875_99663022_99668221_99668304_99668831
transcript_44956.known	chr14	+	4460	22	FSM	ENSG00000066629.18	ENST00000262233.11	4460	22	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_13	15.0097473998333	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCATTTCATTTTAAT	14	True	NA	13	True	AATGAA	-25	NA	99793412	99942060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_99793544_99850852_99851036_99865513_99865647_99878484_99878620_99891198_99891228_99894628_99894759_99897144_99897295_99898232_99898303_99900928_99901040_99907637_99907734_99909344_99909480_99910241_99910342_99911421_99911577_99914178_99914305_99914565_99914698_99917781_99917850_99920788_99920878_99936028_99936127_99936246_99936335_99937816_99937913_99939196_99939328_99939986
transcript_44960.known	chr14	+	1547	3	FSM	ENSG00000196405.13	ENST00000555848.1	1547	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	14	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCGGGCTCAGGCCCTC	NA	False	NA	12	True	AATAAA	-16	NA	100140292	100144235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100141247_100141735_100141794_100143700
transcript_44962.known	chr14	-	3834	3	FSM	ENSG00000168350.8	ENST00000305631.7	3834	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACCTGGTGTTCCGTGT	-8	True	NA	NA	False	TATAAA	-16	NA	100159645	100143956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100146908_100148967_100149711_100159505
transcript_44964.known	chr14	+	6534	5	FSM	ENSG00000100811.14	ENST00000262238.10	6534	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	30.0613955098562	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCCTGTGGTTCTTGT	-13	True	NA	19	True	AATAAA	-19	NA	100239143	100282788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100239924_100262303_100262467_100274697_100274759_100276489_100276649_100277417
transcript_44968.known	chr14	-	2291	4	FSM	ENSG00000197119.13	ENST00000359232.8	2291	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	147.271480229163	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGAGGCTGCCTTTGCA	-3	True	NA	-19	True	AATAAA	-19	NA	100306444	100291115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100293033_100293293_100293378_100298841_100298886_100306198
transcript_44970.known	chr14	-	331	2	FSM	ENSG00000258982.1	ENST00000554537.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTAACACTCACTGCA	1474	False	NA	NA	False	NA	NA	NA	100238555	100207406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100207653_100238470
transcript_44971.known	chr14	+	2742	1	FSM	ENSG00000100811.14	ENST00000623799.1	2742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATGGCAGAACAAGATC	NA	False	NA	14	True	AATAAA	-19	NA	100275728	100278470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100275700_100278500
transcript_44972.known	chr14	+	826	2	FSM	ENSG00000100811.14	ENST00000554579.1	826	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTATCTTGCTCTGTAA	NA	False	NA	NA	False	ATTAAA	-35	NA	100276198	100277793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100276649_100277417
transcript_44974.known	chr14	+	2123	7	FSM	ENSG00000176473.14	ENST00000335290.10	2123	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	37.9956137819442	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	39	True	NA	32	True	AATAAA	-36	NA	100376493	100530303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100376705_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_44976.known	chr14	+	705	6	FSM	ENSG00000176473.14	ENST00000555775.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	40.4049501917772	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGACTTGCTGGTGAC	-37	True	NA	NA	False	NA	NA	NA	100376417	100529855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100376496_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_44978.nnic	chr14	+	1009	5	NIC	ENSG00000176473.14	novel	1923	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	50.563697451828	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	-41	True	NA	32	True	AATAAA	-36	NA	100376413	100530303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_100376496_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_44980.known	chr14	+	1923	7	FSM	ENSG00000176473.14	ENST00000402312.8	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	31.5700279801375	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	30	True	NA	32	True	AATAAA	-36	NA	100376484	100530303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100376496_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_44992.known	chr14	-	2690	10	FSM	ENSG00000140105.18	ENST00000344102.9	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_9	384.085381454324	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCACCCAGTAGAGTAAAT	4	True	NA	-48	True	NA	NA	NA	100375608	100333827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100375282
transcript_44994.known	chr14	-	2466	10	FSM	ENSG00000140105.18	ENST00000358655.8	2466	10	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_9	330.498090243077	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCTCCTGCTCTTGTC	-23	True	NA	-22	True	AATAAA	-4	NA	100376335	100333801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100376259
transcript_45.known	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102852	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00096_+_0_1100
transcript_45006.known	chr14	-	573	4	FSM	ENSG00000140105.18	ENST00000555063.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	469.689495541706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTGCTTATAAACCAT	-31	True	NA	NA	False	NA	NA	NA	100376343	100354400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100354567_100360553_100360663_100361707_100361922_100376259
transcript_45008.known	chr14	-	2639	11	FSM	ENSG00000140105.18	ENST00000392882.7	2639	11	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_10	275.829657578731	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCATTGTGCTCTGT	-1	True	NA	-10	True	AATAAA	-16	NA	100375347	100333789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100375282
transcript_45009.known	chr14	-	560	4	FSM	ENSG00000140105.18	ENST00000553769.6	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	411.910454130776	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGTCCTCTGCTTTCTTC	3	True	NA	NA	False	NA	NA	NA	100376309	100361707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100361922_100369086_100369259_100375282_100375407_100376259
transcript_4501.nic	chr1	+	1653	11	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.131969100652	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	NA	False	NA	18	True	AATAGA	-15	NA	44213424	44220673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_44213528_44213662_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_45010.known	chr14	-	582	3	FSM	ENSG00000140105.18	ENST00000557094.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCTTTCTTCCCAGA	0	True	NA	NA	False	NA	NA	NA	100375473	100361702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100361922_100369086_100369259_100375282
transcript_45015.known	chr14	+	1582	7	FSM	ENSG00000214548.18	ENST00000451743.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.6029964853047	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTGCTACTAATATAAG	7	False	NA	NA	False	AATAAA	-29	NA	100826125	100861031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100836166_100836301_100845457_100845534_100860690
transcript_45017.known	chr14	+	1426	6	FSM	ENSG00000214548.18	ENST00000521404.5	1426	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.93473376995095	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCTCAATAAATGTGTT	7	False	NA	NA	False	NA	NA	NA	100826125	100860989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100836166_100836301_100845457_100845534_100860690
transcript_45022.known	chr14	+	2853	4	FSM	ENSG00000214548.18	ENST00000524035.5	2853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.73053390247253	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGATGGATGTGCTA	226	False	NA	NA	False	AATAAA	-19	NA	100833763	100861021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100836076_100836166_100836301_100845457_100845534_100860690
transcript_45025.nnic	chr14	-	1266	6	NNC	ENSG00000230805.8	novel	1493	6	NA	NA	-46	3	intron_retention	FALSE	canonical	0	0	junction_2	9.45304183847718	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAATCTGAATTTTTTC	NA	False	NA	-13	True	AATAAA	-33	NA	101077721	101071974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_101072371_101072531_101072901_101074032_101074130_101074480_101074562_101076533_101076707_101077571
transcript_45026.nnic	chr14	-	1424	5	NIC	ENSG00000230805.8	novel	1493	6	NA	NA	-46	0	intron_retention	FALSE	canonical	0	0	junction_1	9.77241014284603	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTCCAAATCTGAATTTT	NA	False	NA	-16	True	AATAAA	-30	NA	101077721	101071977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_101072901_101074032_101074130_101074480_101074562_101076533_101076707_101077571
transcript_45033.nnic	chr14	-	846	3	Antisense	novelGene_ENSG00000258497.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGTCATATTGACTGC	NA	False	NA	NA	False	ATTAAA	-20	NA	101310986	101263299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_101263816_101286595_101286640_101310700
transcript_45038.nnic	chr14	+	1140	3	Antisense	novelGene_ENSG00000258460.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0.5	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGCTTTAAGA	NA	False	NA	NA	False	AAAAAG	-45	NA	101304952	101360234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_101305061_101356189_101356441_101359453
transcript_45041.nnic	chr14	+	912	2	Antisense	novelGene_ENSG00000258460.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGCTTTAAGA	NA	False	NA	NA	False	AAAAAG	-45	NA	101304929	101360234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_101305061_101359453
transcript_45043.nnic	chr14	+	1060	2	Antisense	novelGene_ENSG00000258460.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGCTTTAAG	NA	False	NA	NA	False	AAAAAG	-44	NA	101308966	101360233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_101309247_101359453
transcript_45045.known	chr14	-	866	3	FSM	ENSG00000258498.9	ENST00000554694.2	910	3	35	9	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTAAATGAGTGCGGTG	-16	True	NA	NA	False	AATAAA	-11	NA	101560403	101557307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_101557820_101558632_101558835_101560251
transcript_45046.known	chr14	-	686	2	FSM	ENSG00000258498.9	ENST00000557109.5	686	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGGTGCCGGGGGATTT	-16	True	NA	0	True	AATAAA	-23	NA	101560403	101552220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_101552755_101560251
transcript_45047.known	chr14	+	2102	1	FSM	ENSG00000197406.7	ENST00000510508.4	2102	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	319	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGCCTTTGGTCCCT	NA	False	NA	26	True	AATAAA	-20	NA	101561350	101563452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101561400_101563500
transcript_45048.known	chr14	+	639	4	FSM	ENSG00000258512.1	ENST00000556973.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAATAGAAACCAGCAGA	32	False	NA	NA	False	AATAAA	-20	NA	101730436	101732522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101730488_101731356_101731469_101731787_101731977_101732235
transcript_45049.known	chr14	+	438	1	FSM	ENSG00000241494.1	ENST00000472981.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1078	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATCTTATATACGAGCT	NA	False	NA	NA	False	AATACA	-33	NA	101677942	101678380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101677900_101678400
transcript_4505.known	chr1	+	1552	11	FSM	ENSG00000178028.14	ENST00000315913.9	1552	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	102.861119962793	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	-15	True	NA	26	True	AATAGA	-23	NA	44213487	44220681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44213528_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_45052.known	chr14	+	1526	12	FSM	ENSG00000078304.19	ENST00000445439.7	1526	12	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	27.9766726912982	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	12	False	NA	20	True	AATAAA	-22	NA	101809894	101912625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
transcript_45057.known	chr14	+	735	2	FSM	ENSG00000078304.19	ENST00000556946.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTTTAAATCCTAAG	16	True	NA	NA	False	ATTAAA	-19	NA	101809834	101836701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101810037_101836168
transcript_45058.known	chr14	+	2013	3	FSM	ENSG00000078304.19	ENST00000556260.6	2013	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	32.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGCTTCAGCTTAGTTT	76	False	NA	32	True	ATTAAA	-29	NA	101761869	101767049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101761921_101762904_101762971_101765153
transcript_45059.known	chr14	+	1307	10	FSM	ENSG00000078304.19	ENST00000557095.5	1307	10	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	19.6211022707948	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCTTTGTGGACTCATAA	22	False	NA	NA	False	AATAAA	-41	NA	101809904	101906647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401
transcript_45060.known	chr14	+	4045	15	FSM	ENSG00000078304.19	ENST00000328724.9	4045	15	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_2	161.541063838649	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTGTACAAAATGTCC	91	False	NA	11	True	AATAAA	-13	NA	101761884	101927685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101761921_101762904_101762971_101786017_101786184_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400_101912474_101925140
transcript_45061.known	chr14	-	448	2	FSM	ENSG00000259088.1	ENST00000554859.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGGGCTGAAGCTAGA	9194	False	NA	NA	False	NA	NA	NA	101810321	101796554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_101796898_101810216
transcript_45062.known	chr14	+	1079	1	FSM	ENSG00000271780.1	ENST00000607414.1	1079	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTTGAATAAGTGAT	-3	True	NA	83	True	ATTAAA	-36	NA	101948346	101949425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101948300_101949400
transcript_45066.nic	chr14	+	1484	7	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-41	21211	-41	-6133	5prime_fragment	FALSE	canonical	3	94	junction_4	16.303544263612	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAATCTGAAGATG	-6	True	NA	NA	False	AAGAAA	-3	NA	101964531	101983472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381
transcript_45069.known	chr14	-	3510	12	FSM	ENSG00000080824.19	ENST00000334701.11	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	1169.78661612823	3780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGACAGTGTCTT	-11	True	NA	-8	True	AATACA	-14	NA	102139686	102081048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102101874_102102086_102139249
transcript_4508.known	chr1	+	1545	11	FSM	ENSG00000178028.14	ENST00000361745.10	1545	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	118.635618597452	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	-6	True	NA	26	True	AATAGA	-23	NA	44213454	44220681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44213528_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_4510.nnic	chr1	+	1599	11	NNC	ENSG00000178028.14	novel	1552	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	117.169321923445	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	-6	True	NA	18	True	AATAGA	-15	NA	44213454	44220673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_44213550_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_45100.known	chr14	-	2355	11	FSM	ENSG00000080823.23	ENST00000519569.5	2355	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	23.4222116803687	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTAATGTTTTCCG	-4	True	NA	-15	True	ATTAAA	-22	NA	102305189	102228835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102229367_102229456_102229658_102231706_102231822_102232534_102232709_102233687_102233790_102250811_102250988_102251443_102251996_102263545_102263617_102265822_102265913_102283477_102283593_102304961
transcript_45117.known	chr14	+	491	3	FSM	ENSG00000140153.18	ENST00000557485.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	57	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACATGTACTTATATAA	79	False	NA	NA	False	NA	NA	NA	102139502	102208683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102139730_102194937_102195121_102208602
transcript_4512.nnic	chr1	+	1624	11	NNC	ENSG00000178028.14	novel	1552	11	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	121.65726447689	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	2	True	NA	18	True	AATAGA	-15	NA	44213462	44220673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_44213583_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_45121.known	chr14	+	785	3	FSM	ENSG00000140153.18	ENST00000556094.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGACGCTGCAATCACAG	15	True	NA	NA	False	NA	NA	NA	102139914	102223358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102139988_102194937_102195121_102222829
transcript_45123.known	chr14	+	2198	3	FSM	ENSG00000140153.18	ENST00000299135.6	2198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTTGTAGCACTTTG	11	True	NA	16	True	AATAAA	-16	NA	102139910	102210525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102193462_102193476_102208602
transcript_45124.known	chr14	+	2175	4	FSM	ENSG00000140153.18	ENST00000555879.5	2175	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	1.4142135623731	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGCAGTTTGTAGCAC	-7	True	NA	12	True	AATAAA	-12	NA	102139892	102210521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102193462_102193515_102194937_102195121_102208861
transcript_45125.known	chr14	+	2382	3	FSM	ENSG00000140153.18	ENST00000556807.1	2382	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	13	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTTGTTTATCTTCTG	-7	True	NA	NA	False	ATTAAA	-14	NA	102139892	102223671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102208602_102209863_102222829
transcript_45132.known	chr14	-	640	2	FSM	ENSG00000080823.23	ENST00000518045.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATAGAGAGCTCGGAAGTG	12	True	NA	NA	False	ATTAAA	-39	NA	102305139	102283130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102283593_102304961
transcript_45135.known	chr14	-	3228	11	FSM	ENSG00000080824.19	ENST00000216281.13	3228	11	0	0	0	0	multi-exon	FALSE	canonical	3	2377	junction_7	348.424468141949	26225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGTGTCTCAAAGTTC	-1	True	NA	-5	True	AATACA	-19	NA	102087044	102080741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_45136.known	chr14	-	581	5	FSM	ENSG00000080824.19	ENST00000553585.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1147.90556558456	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAGAAGAGAA	-1	True	NA	-133	True	AAGAAA	-18	NA	102087044	102084932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102084999_102085297_102085432_102085964_102086125_102086216_102086379_102086985
transcript_45137.known	chr14	+	2616	4	FSM	ENSG00000140153.18	ENST00000335263.9	2616	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	41.1204193666467	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGTTTATCTTCTGTT	420	False	NA	NA	False	ATTAAA	-16	NA	102139843	102223673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102194937_102195121_102208602_102209863_102222829
transcript_45138.known	chr14	+	2384	3	FSM	ENSG00000140153.18	ENST00000342702.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	12.5	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTAGCACTTTGAT	-3	True	NA	18	True	AATAAA	-18	NA	102139896	102210527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102194937_102195121_102208602
transcript_45139.known	chr14	+	2695	5	FSM	ENSG00000140153.18	ENST00000424963.6	2695	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	51.5703403130133	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATACCGCTTGTTTATCT	428	False	NA	NA	False	ATTAAA	-10	NA	102139851	102223667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102194937_102195121_102197754_102197848_102208602_102209863_102222829
transcript_45143.known	chr14	-	845	5	FSM	ENSG00000100865.15	ENST00000536961.6	845	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	202.199777447949	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGGCCTGGATCAGACC	167	False	NA	NA	False	NA	NA	NA	102362714	102348484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362573
transcript_45147.known	chr14	-	953	5	FSM	ENSG00000100865.15	ENST00000216756.11	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_4	40.1707293934277	2461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTGATCTAGTTTC	-9	True	NA	-2	True	AGTAAA	-23	NA	102362890	102348281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_45148.known	chr14	-	4270	6	FSM	ENSG00000100865.15	ENST00000559514.5	4270	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	175.419041155742	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACAGTGTGCTTTTTTTT	NA	False	NA	2	True	ATTAAA	-20	NA	102362916	102341101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102344390_102348278_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_45149.known	chr14	+	8704	20	FSM	ENSG00000196663.16	ENST00000359520.12	8704	20	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	12.0147646933729	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGTCTCTAACTACT	-5	True	NA	12	True	AATAAA	-21	NA	102362940	102502477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102363117_102376649_102376941_102407337_102407467_102408487_102408620_102414635_102414794_102424978_102425292_102428249_102428383_102431795_102432129_102434234_102435212_102438021_102438206_102440435_102440610_102443646_102443828_102445805_102445948_102449628_102449870_102450559_102450650_102452393_102452628_102465140_102465290_102496978_102497121_102497569_102497720_102498102
transcript_4515.nic	chr1	+	1656	11	NIC	ENSG00000178028.14	novel	1742	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.510621938483	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	10	True	NA	18	True	AATAGA	-15	NA	44213470	44220673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_44213663_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_45151.known	chr14	+	5751	12	FSM	ENSG00000089902.10	ENST00000262241.7	5751	12	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_5	5.30554053142359	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAATGAAAGCATTTTC	9	True	NA	NA	False	AATAAA	-28	NA	102592648	102730561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102593188_102593265_102593326_102681894_102681979_102701277_102701331_102707350_102707513_102708464_102708584_102710934_102711014_102714422_102714618_102721006_102721085_102721319_102721378_102722186_102722417_102726467
transcript_45152.known	chr14	+	7806	12	FSM	ENSG00000131323.16	ENST00000392745.8	7806	12	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_10	6.58322436008424	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGATCACACCGTCTC	4	True	NA	15	True	AATAAA	-19	NA	102777448	102911500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102777676_102830333_102830473_102870184_102870447_102871916_102871969_102875623_102875729_102876357_102876526_102886188_102886270_102889559_102889635_102891324_102891418_102897260_102897402_102903254_102903430_102905212
transcript_45153.known	chr14	-	486	2	FSM	ENSG00000259717.1	ENST00000558224.1	486	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTGTGTCTGCATCTG	3682	False	NA	NA	False	AATAAA	-20	NA	103122909	103120846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103121032_103122608
transcript_45154.nnic	chr14	+	837	2	Genic_Genomic	ENSG00000259374.2	novel	395	1	NA	NA	-802	52	multi-exon	FALSE	canonical	3	12	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTAAAGTTTGAGA	1511	False	NA	5	True	AATAAA	-17	NA	103138872	103140121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_+_103139261_103139672
transcript_45155.known	chr14	-	1558	3	FSM	ENSG00000251533.2	ENST00000514902.2	1558	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTCTTTTATTCAT	NA	False	NA	-5	True	AATAAA	-13	NA	103189028	103187220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103188271_103188376_103188448_103188591
transcript_45158.nic	chr14	+	1897	11	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	753.300345147936	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATGTTTGGCTCTGAA	NA	False	NA	9	True	AATAAA	-20	NA	103334171	103341356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_45161.nic	chr14	+	736	5	NIC	ENSG00000100664.11	novel	5710	12	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	1092.63866396902	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTTCCATGATGAAC	NA	False	NA	NA	False	CATAAA	-32	NA	103334171	103337227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676_103336850_103337115
transcript_45164.known	chr14	+	5710	12	FSM	ENSG00000100664.11	ENST00000216554.8	5710	12	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_1	242.614274003846	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACTTGTGTTCAA	25	True	NA	9	True	AATAAA	-22	NA	103334236	103345025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_45165.known	chr14	+	719	5	FSM	ENSG00000100664.11	ENST00000558316.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	1095.66654941182	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTTCCATGATGAAC	44	False	NA	NA	False	CATAAA	-32	NA	103334386	103337227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103334598_103335791_103335933_103336035_103336118_103336676_103336850_103337115
transcript_45167.nic	chr14	-	1254	6	ISM	ENSG00000166165.14	ENST00000348956.7	1420	8	549	0	21	0	3prime_fragment	FALSE	canonical	3	3069	junction_5	317.434087646554	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	6828	False	NA	-9	True	AATAAA	-19	NA	103522281	103519666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022
transcript_45172.known	chr14	-	270	3	FSM	ENSG00000166165.14	ENST00000555039.1	270	3	0	0	0	0	multi-exon	FALSE	canonical	2	60	junction_2	1939	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCCTGGGCTTCTCAGAG	8008	False	NA	NA	False	NA	NA	NA	103521101	103519991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103520043_103520121_103520312_103521072
transcript_45173.known	chr14	-	735	3	FSM	ENSG00000166165.14	ENST00000554282.5	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	1915	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTGCCTGCGTCTG	7666	False	NA	-21	True	AATAAA	-7	NA	103521443	103519678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103520043_103520121_103520312_103521262
transcript_45174.known	chr14	-	1420	8	FSM	ENSG00000166165.14	ENST00000348956.7	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	2324	junction_7	477.350553598095	3248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	1	True	NA	-9	True	AATAAA	-19	NA	103522830	103519666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022_103522178_103522300_103522506_103522765
transcript_45175.known	chr14	-	4063	1	FSM	ENSG00000260285.1	ENST00000568177.1	4063	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTTTGTCTCTGTGTCT	-11	True	NA	-4	True	NA	NA	NA	103529072	103525009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103525000_103529100
transcript_45179.nnic	chr14	+	2020	4	NNC	ENSG00000166166.13	novel	3217	4	NA	NA	-31	-1028	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	59.4773532998532	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGAGTGATCCCTAGC	7060	False	NA	9	True	AATAAA	-16	NA	103529164	103536045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_103529262_103530149_103530310_103532581_103532849_103534549
transcript_45180.known	chr14	+	3217	4	FSM	ENSG00000166166.13	ENST00000389749.9	3217	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	10.2740233382816	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	9	True	NA	8	True	ATTAAA	-19	NA	103529195	103537073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103529262_103529949_103530310_103532581_103532849_103534549
transcript_45183.known	chr14	+	2827	3	FSM	ENSG00000166166.13	ENST00000299202.4	2827	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	64.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	2	True	NA	8	True	ATTAAA	-19	NA	103529225	103537073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103529262_103532581_103532849_103534549
transcript_45188.known	chr14	-	4684	2	FSM	ENSG00000166170.12	ENST00000299204.6	4684	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTGTGAGTCTGAGG	-1	True	NA	-7	True	AATAAA	-26	NA	103562657	103556550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103561193_103562615
transcript_45189.nnic	chr14	+	774	4	NIC	ENSG00000256053.9	novel	1234	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	224.695843802733	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	-15	True	NA	23	True	AATAAA	-15	NA	103562959	103590527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_103563125_103571622_103571821_103574106_103574171_103590180
transcript_45190.nnic	chr14	+	1143	4	NIC	ENSG00000256053.9	novel	1234	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	224.695843802733	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTGCTGACGGGAATG	-15	True	NA	5	True	AATAAA	-17	NA	103562959	103590896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_103563125_103571622_103571821_103574106_103574171_103590180
transcript_45192.known	chr14	+	2505	18	FSM	ENSG00000256500.6	ENST00000472726.3	2505	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	137.151369916221	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTCACTTTGGTAACA	-13	True	NA	43	True	AATACA	-25	NA	103562961	103685924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985_103685037_103685637
transcript_45193.known	chr14	+	770	6	FSM	ENSG00000256053.9	ENST00000489117.5	770	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	245.455820872107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGGAGCTGATCTCA	16	False	NA	NA	False	GGGGCT	-6	NA	103563052	103590360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103563214_103563380_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_45198.known	chr14	+	575	3	FSM	ENSG00000256053.9	ENST00000440963.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	218.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGCCCAAGCACT	-10	True	NA	0	True	NA	NA	NA	103562964	103590504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103587273_103587365_103590180
transcript_45200.known	chr14	+	513	3	FSM	ENSG00000256053.9	ENST00000492189.5	513	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTTCCTAAGGGGCCCC	134	False	NA	NA	False	GGGGCT	-35	NA	103563170	103590389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563384_103587273_103587365_103590180
transcript_45201.known	chr14	+	2506	5	FSM	ENSG00000256053.9	ENST00000674165.1	2506	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_2	35.2526594741446	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGATT	-12	True	NA	NA	False	NA	NA	NA	103562962	103592171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_45202.known	chr14	+	782	4	FSM	ENSG00000256053.9	ENST00000458117.6	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	210.086225684175	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	4	True	NA	23	True	AATAAA	-15	NA	103562978	103590527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103571622_103571821_103587273_103587365_103590180
transcript_45203.known	chr14	+	906	5	FSM	ENSG00000256053.9	ENST00000477116.5	906	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	218.846264532891	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTTTCCTGTGTTTC	136	False	NA	22	True	AATAAA	-14	NA	103563172	103590526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563380_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_45204.known	chr14	+	811	1	FSM	ENSG00000269958.1	ENST00000602422.1	811	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCAGAAAGGCTGTTT	4866	False	NA	31	True	AATAAA	-32	NA	103696352	103697163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103696400_103697200
transcript_45206.known	chr14	-	2567	10	FSM	ENSG00000126215.14	ENST00000555055.6	2567	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	65.7047267029634	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	11	True	NA	-33	True	AATAAA	-16	NA	103715451	103697616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_45208.known	chr14	-	2563	9	FSM	ENSG00000126215.14	ENST00000352127.11	2563	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	63.1603861213657	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	NA	False	NA	-33	True	AATAAA	-16	NA	103715504	103697616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103715423
transcript_45209.known	chr14	-	2599	8	FSM	ENSG00000126215.14	ENST00000557439.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	108.736716289337	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCTTTTAATAGAAGC	-21	True	NA	NA	False	AATAAA	-12	NA	103715483	103704395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103706043_103706206_103706376_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_45217.known	chr14	+	1521	8	FSM	ENSG00000100711.14	ENST00000216602.10	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	153.364179092027	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCTCGCCTTCCTGTG	0	True	NA	24	True	ATTAAA	-21	NA	103715729	103733668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103729792_103729847_103732619_103732763_103732982
transcript_45220.known	chr14	+	1383	7	FSM	ENSG00000100711.14	ENST00000311141.7	1383	7	0	0	0	0	multi-exon	TRUE	canonical	3	381	junction_5	128.859958438954	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	2	True	NA	20	True	ATTAAA	-17	NA	103715809	103733664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103732619_103732763_103732982
transcript_45229.known	chr14	+	566	5	FSM	ENSG00000100711.14	ENST00000554630.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_4	26.6211851727154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGTTTGGTGCCATGC	23	True	NA	NA	False	NA	NA	NA	103715830	103729211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090
transcript_45237.nnic	chr14	+	1722	3	NNC	ENSG00000287346.1	novel	1338	4	NA	NA	-1060	0	intron_retention	FALSE	canonical	1	1	junction_1	2	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCCTCTCGGCCTCTGGG	NA	False	NA	25	True	AATAAA	-32	NA	103872087	103880381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_103872631_103877394_103877596_103879403
transcript_4524.known	chr1	+	1742	10	FSM	ENSG00000178028.14	ENST00000372289.7	1742	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.3829755422309	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	10	True	NA	18	True	AATAGA	-15	NA	44213470	44220673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_45240.known	chr14	-	472	5	FSM	ENSG00000156411.10	ENST00000557040.5	472	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2044.71330508705	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACCTGGTACTGCTTT	62	False	NA	-13	True	AATAAA	-18	NA	103921494	103912515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103918004_103918125_103921469
transcript_45242.known	chr14	-	842	5	FSM	ENSG00000156411.10	ENST00000414262.6	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2024.74381095486	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTACTTATCTTGT	55	False	NA	-30	True	AATAAA	-15	NA	103921501	103912301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103920939_103921209_103921469
transcript_45253.known	chr14	-	271	3	FSM	ENSG00000156411.10	ENST00000553449.1	271	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1952.5	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTACCTGGTACTGCTT	-15	True	NA	-14	True	AATAAA	-17	NA	103921538	103912516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103921469
transcript_45255.known	chr14	-	615	4	FSM	ENSG00000156411.10	ENST00000286953.8	615	4	0	0	0	0	multi-exon	TRUE	canonical	3	3952	junction_1	119.789630417476	17690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGCCTCTCTGAGCC	-6	True	NA	-16	True	AATAAA	-29	NA	103921529	103912287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103921469
transcript_45256.known	chr14	-	749	5	FSM	ENSG00000156411.10	ENST00000555030.5	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2027.97095331763	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTACTTATCTTGTGG	3	True	NA	-28	True	AATAAA	-17	NA	103921520	103912299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103914478_103914634_103915065_103915190_103921469
transcript_45257.known	chr14	-	636	4	FSM	ENSG00000258986.7	ENST00000615704.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.24264068711928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCTTTGCCGAGATGAA	41	False	NA	NA	False	NA	NA	NA	104604741	104594281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104594396_104595164_104595244_104596989_104597128_104604436
transcript_45258.known	chr14	-	2513	3	FSM	ENSG00000258986.7	ENST00000341595.7	2513	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCGGCTAAAGGTCAATTT	NA	False	NA	NA	False	ATTAAA	-27	NA	104605647	104594079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104595244_104596989_104597128_104604436
transcript_45259.known	chr14	-	3348	4	FSM	ENSG00000258986.7	ENST00000556573.6	3348	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTCTATTCCTCAAAA	10	True	NA	-1	True	AGTAAA	-15	NA	104604772	104590863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104593659_104595164_104595244_104596989_104597128_104604436
transcript_45262.known	chr14	+	550	3	FSM	ENSG00000184990.13	ENST00000347067.9	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	663	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTTGTCTGTCAGCAC	18	True	NA	33	True	AATAAA	-22	NA	104753158	104759659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104753320_104756603_104756761_104759427
transcript_45265.known	chr14	+	752	4	FSM	ENSG00000184990.13	ENST00000329967.11	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	1385	junction_3	47.6678321535836	16513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGACTCTTGTCTGTC	6	True	NA	28	True	AATAAA	-17	NA	104753146	104759654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104759427
transcript_45266.known	chr14	+	1244	3	FSM	ENSG00000184990.13	ENST00000535554.4	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	20	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGAGGCCCAGACTCAT	6	True	NA	NA	False	NA	NA	NA	104753146	104757479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104753320_104755629_104755825_104756603
transcript_45267.known	chr14	+	4142	2	FSM	ENSG00000184990.13	ENST00000556431.1	4142	2	0	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGAGGACTCTTGTCTGT	13	True	NA	27	True	AATAAA	-16	NA	104753201	104759653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104753320_104755629
transcript_45268.known	chr14	-	3066	14	FSM	ENSG00000142208.18	ENST00000555528.5	3066	14	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_13	175.266323130454	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAAAGTTGCTTTTCA	7248	False	NA	-24	True	AATATA	-26	NA	104793700	104769370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104793126
transcript_45269.known	chr14	-	1595	14	FSM	ENSG00000142208.18	ENST00000554848.5	1595	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	234.057975926211	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCGGTGGACTGCGCTG	6757	False	NA	NA	False	NA	NA	NA	104794191	104770340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104794118
transcript_45271.known	chr14	-	305	1	FSM	ENSG00000279140.1	ENST00000625139.1	305	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTATGATGCTCCATTT	NA	False	NA	NA	False	AATAAA	-18	NA	104815753	104815448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104815400_104815800
transcript_45272.known	chr14	-	856	1	FSM	ENSG00000196183.5	ENST00000476944.2	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGGTTTTTATACAAGAGA	NA	False	NA	NA	False	NA	NA	NA	104836852	104835996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104836000_104836900
transcript_45275.known	chr14	+	790	5	FSM	ENSG00000140104.14	ENST00000551606.5	790	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.65336728815391	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCCTGTGTTCTGGGCT	-12	True	NA	NA	False	NA	NA	NA	104985774	104994890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104985879_104988942_104989089_104991490_104991621_104992947_104993065_104994597
transcript_45276.known	chr14	-	1536	3	FSM	ENSG00000170779.11	ENST00000392590.3	1536	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	298.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGTGGTGTTAGTTA	20	True	NA	76	True	ATTAAA	-21	NA	105021060	105009935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105010634_105011159_105011936_105020998
transcript_45277.known	chr14	-	2448	2	FSM	ENSG00000170779.11	ENST00000336219.4	2448	2	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	0	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTAGTAGTTGTAGTGC	-3	True	NA	33	True	NA	NA	NA	105021083	105009572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105011936_105020998
transcript_45284.known	chr14	-	1042	5	FSM	ENSG00000183828.15	ENST00000551024.5	1042	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	89.6921819335442	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGTTGCGGTGAGCCTGA	NA	False	NA	NA	False	NA	NA	NA	105181323	105175487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105175988_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_45289.known	chr14	-	854	5	FSM	ENSG00000183828.15	ENST00000392568.7	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	17.6210101867061	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	-18	True	NA	-6	True	AATAAA	-17	NA	105181312	105172938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105173262_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_45291.known	chr14	-	541	2	FSM	ENSG00000183828.15	ENST00000550912.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGCTGGTTCTGA	7597	False	NA	-5	True	AATAAA	-18	NA	105173697	105172937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105173262_105173480
transcript_45293.nnic	chr14	+	693	2	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTCTCTGTGTCTGTCA	276	False	NA	NA	False	AATAAA	-17	NA	105301065	105307539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr14_+_105301289_105307069
transcript_45299.known	chr14	+	1178	8	FSM	ENSG00000182809.11	ENST00000329146.9	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	4.29997626951212	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTCTCTGCTTGTGGG	0	True	NA	23	True	AATAAA	-17	NA	105474820	105480162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_105474906_105478265_105478361_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_45302.known	chr14	+	677	6	FSM	ENSG00000213145.10	ENST00000409393.6	677	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.8852439661678	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCAGGCCACCCTAG	256	False	NA	NA	False	NA	NA	NA	105486866	105488947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_105486973_105487212_105487300_105488165_105488261_105488330_105488389_105488470_105488517_105488662
transcript_45303.known	chr14	+	1311	5	FSM	ENSG00000213145.10	ENST00000330233.11	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.63145976158349	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTACATGCGCGTG	0	True	NA	25	True	AGTAAA	-20	NA	105486316	105488791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_105487300_105488165_105488261_105488330_105488389_105488470_105488517_105488662
transcript_45308.known	chr14	-	627	1	FSM	ENSG00000225200.2	ENST00000392301.3	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTTTTGTCTTCACC	7932	False	NA	NA	False	NA	NA	NA	105979146	105978519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105978500_105979100
transcript_45314.known	chr15	+	582	6	FSM	ENSG00000170113.16	ENST00000557930.1	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	51.4563893020099	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAGAGCCCTCTGCCTG	41	False	NA	NA	False	NA	NA	NA	22786812	22823916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22814082_22814154_22820312_22820474_22823727
transcript_45316.known	chr15	+	6553	5	FSM	ENSG00000170113.16	ENST00000337435.9	6553	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	12.6589889011722	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	2	True	NA	20	True	AATAAA	-21	NA	22786643	22829789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22820312_22820474_22823727
transcript_45317.known	chr15	+	4223	3	FSM	ENSG00000274253.6	ENST00000619879.6	4229	3	6	0	6	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCCATCTGCTCCTC	-2	True	NA	NA	False	NA	NA	NA	22757840	22768189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22757995_22758818_22758922_22764223
transcript_45319.known	chr15	+	1449	5	FSM	ENSG00000274253.6	ENST00000619611.4	1449	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTCTTTTTTTTCATT	14	False	NA	18	True	ATTAAA	-22	NA	22757856	22778741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22757995_22758818_22758922_22764223_22764359_22774215_22774314_22777766
transcript_45320.known	chr15	-	6826	31	FSM	ENSG00000273749.5	ENST00000617928.5	6826	31	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_12	39.2561955478226	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATGTGCTGAGGTCAT	-6	True	NA	NA	False	AATAAA	-14	NA	22980368	22867051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
transcript_45322.nnic	chr15	-	1872	10	NNC	ENSG00000273749.5	novel	3471	10	NA	NA	12134	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	137.589656516204	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	NA	False	NA	-22	True	AATAAA	-14	NA	22893306	22869465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22893170
transcript_45323.nnic	chr15	-	1831	10	NNC	ENSG00000273749.5	novel	3471	10	NA	NA	12125	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_9	138.5018607532	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	NA	False	NA	-22	True	AATAAA	-14	NA	22893315	22869465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22893220
transcript_45325.known	chr15	-	4515	32	FSM	ENSG00000273749.5	ENST00000610365.4	4515	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	107.348257009783	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTTCATTTATTTAC	10	True	NA	-22	True	AATAAA	-14	NA	22980352	22869465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22947910_22948030_22980286
transcript_45327.known	chr15	+	3227	8	FSM	ENSG00000140157.16	ENST00000337451.8	3227	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	352.118080843831	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	-25	True	NA	9	True	AATAAA	-21	NA	22838665	22868384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_45329.known	chr15	+	2099	7	FSM	ENSG00000140157.16	ENST00000674477.1	2099	7	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	345.23023718479	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAGAAATCACCCCAAGG	-5	True	NA	145	True	AATGAA	-30	NA	22838685	22867398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22838922_22839654_22839791_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_45330.known	chr15	+	2280	6	FSM	ENSG00000140157.16	ENST00000398013.7	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_1	191.002198940222	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	-4	True	NA	8	True	AATAAA	-9	NA	22838686	22867716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22838922_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_45334.known	chr15	-	3744	23	FSM	ENSG00000275835.5	ENST00000615383.5	3744	23	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	15.8721649384925	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTATCCTTTTGCTGC	3	True	NA	-1	True	AATAAA	-19	NA	23039569	22999176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_45335.nic	chr15	-	2607	18	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	-69	5792	-69	-277	5prime_fragment	FALSE	canonical	3	87	junction_1	12.9320823661644	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATGTTTTACTTTTT	-2	True	NA	-13	True	AATAAA	-15	NA	23039641	23006075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_45337.nic	chr15	-	1666	13	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	-69	17677	-69	-8001	5prime_fragment	FALSE	canonical	3	94	junction_7	13.3570102276753	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAGAAAAAATGAGTGATA	-2	True	NA	NA	False	NA	NA	NA	23039641	23017960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_45340.nic	chr15	-	1183	9	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	-69	24289	-69	1550	5prime_fragment	FALSE	canonical	3	94	junction_3	14.6495520409329	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTGTGCATCTTTATA	-2	True	NA	NA	False	AAAAAG	-36	NA	23039641	23024572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_45342.known	chr15	-	3342	22	FSM	ENSG00000275835.5	ENST00000620435.4	3342	22	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	14.8719401281273	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGTGTAGTTTTTGTAA	0	True	NA	NA	False	AATAAA	-34	NA	23039572	23000283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_45345.nnic	chr15	+	1641	4	NNC	ENSG00000274471.2	novel	883	6	NA	NA	-5857	-2519	intron_retention	FALSE	canonical	3	33	junction_3	5.09901951359278	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAATCTGTTTTTACTA	-12	True	NA	NA	False	NA	NA	NA	23303749	23310757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_23303819_23304427_23304531_23309139_23309458_23309606
transcript_45346.nic	chr15	+	2003	3	ISM	ENSG00000274471.2	ENST00000649848.1	1856	4	216	0	216	0	3prime_fragment	FALSE	canonical	3	40	junction_2	1.5	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGCTCCTGGTTTTTGT	7335	False	NA	NA	False	AATAAA	-18	NA	23311096	23314566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_23311513_23311604_23311730_23313104
transcript_45347.known	chr15	-	1906	1	FSM	ENSG00000182636.8	ENST00000649030.2	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	816	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCTTAAGTTTCT	-4	True	NA	NA	False	AATAAA	-13	NA	23687305	23685399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_23685400_23687300
transcript_45361.nnic	chr15	+	814	3	NIC	ENSG00000128739.23	novel	849	8	NA	NA	-12	-55061	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	19.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTATCAGGTATTTATT	2	True	NA	NA	False	NA	NA	NA	24856538	24912924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_24856717_24886515_24886590_24912362
transcript_45420.known	chr15	+	1605	12	FSM	ENSG00000128739.23	ENST00000400097.5	1605	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	3395.95845354177	3395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	14	False	NA	21	True	AATAAA	-23	NA	24856550	24978582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_4553.known	chr1	+	916	10	FSM	ENSG00000187147.18	ENST00000475378.5	916	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_2	66.9766865648778	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCTGCCCCCAGCCT	290	False	NA	NA	False	NA	NA	NA	44632254	44650808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_4554.nic	chr1	+	1935	10	NIC	ENSG00000187147.18	novel	3099	15	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	276	junction_2	94.1960131262937	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	264	False	NA	NA	False	ATTAAA	-16	NA	44632228	44651723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_45561.known	chr15	+	525	5	FSM	ENSG00000128739.23	ENST00000400098.6	525	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	3294.9686644944	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGCTGAACTGAGGCAGG	-15	True	NA	NA	False	NA	NA	NA	24823636	24967985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24823824_24886515_24886590_24920010_24920125_24962113_24962210_24967931
transcript_4557.known	chr1	+	860	4	FSM	ENSG00000187147.18	ENST00000488865.2	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	160.217213668056	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCCCTCTTAAGGCTG	19	False	NA	19	True	ATTAAA	-22	NA	44631983	44636495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44632213_44632342_44632386_44635544_44635667_44636029
transcript_45570.known	chr15	+	1298	10	FSM	ENSG00000128739.23	ENST00000577565.1	1298	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	2424.93588053197	19950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAATAATAAATGCATAGA	26	False	NA	-13	True	NA	NA	NA	24955004	24978548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974287_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_45571.known	chr15	+	1751	13	FSM	ENSG00000128739.23	ENST00000400100.5	1751	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3611.52637302506	3324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	-5	True	NA	21	True	AATAAA	-23	NA	24823646	24978582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24823851_24829797_24829906_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_45572.known	chr15	+	1468	10	FSM	ENSG00000128739.23	ENST00000390687.9	1468	10	0	0	0	0	multi-exon	FALSE	canonical	3	7312	junction_5	229.178242131898	25951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	8	True	NA	12	True	GATAAA	-20	NA	24954986	24978723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_45573.known	chr15	+	1304	10	FSM	ENSG00000128739.23	ENST00000346403.10	1304	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_3	2323.23831040072	3774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTTGTATATATTTT	NA	False	NA	22	True	AATAAA	-24	NA	24954934	24978583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974386_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_45574.known	chr15	+	1763	12	FSM	ENSG00000128739.23	ENST00000554227.6	1763	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	3417.84548877271	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATAGCTAATAATAA	-3	True	NA	-22	True	NA	NA	NA	24954947	24978539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24974641_24974958_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_45582.nic	chr15	+	2636	4	ISM	ENSG00000224078.15	ENST00000551631.7	17832	11	17580	34086	-3168	0	internal_fragment	FALSE	canonical	3	596	junction_1	173.93549251247	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	968	False	NA	38	True	AATATA	-20	NA	24997136	25002404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_24998487_24998969_24999079_25000244_25000375_25001357
transcript_45583.known	chr15	+	1108	2	FSM	ENSG00000224078.15	ENST00000551938.1	1108	2	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGTTTTGTGGTTTT	4145	False	NA	38	True	AATATA	-20	NA	25000313	25002404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_25000375_25001357
transcript_45604.known	chr15	+	650	3	FSM	ENSG00000273173.5	ENST00000577949.5	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	7621	junction_1	42.5	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTTTCTGCCAGTAG	7	True	NA	NA	False	NA	NA	NA	24954985	24968408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931
transcript_45605.known	chr15	+	331	4	FSM	ENSG00000273173.5	ENST00000338327.4	331	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	3592.03436632904	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	35	False	NA	15	True	AATAAA	-23	NA	24955013	24968829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24968794
transcript_45606.known	chr15	+	796	7	FSM	ENSG00000273173.5	ENST00000580062.5	796	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2852.08283053319	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACAGTACCCACCAGGA	25	False	NA	NA	False	NA	NA	NA	24955003	24977850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24975357_24975510_24976304_24976417_24976876_24977030_24977777
transcript_45607.known	chr15	-	8728	13	FSM	ENSG00000114062.22	ENST00000648336.2	8728	13	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_10	131.316702627232	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-10	True	NA	1	True	CATAAA	-21	NA	25439024	25333727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_45608.known	chr15	-	445	4	FSM	ENSG00000114062.22	ENST00000626176.2	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	245.623469743608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAACAAAAAAAAGGAA	NA	False	NA	NA	False	AAAACA	-12	NA	25355982	25339121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25355891
transcript_45609.known	chr15	+	1074	3	FSM	ENSG00000206187.4	ENST00000662457.1	1074	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGATTTGTGTTTTATT	NA	False	NA	NA	False	AATAAA	-16	NA	26051226	26053122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_26051345_26052027_26052228_26052366
transcript_45611.nnic	chr15	-	1012	2	NNC	ENSG00000287280.1	novel	1406	6	NA	NA	64740	53	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCTGATTCTCTAACAAA	NA	False	NA	1	True	AATAAA	-21	NA	26413100	26403426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_26404267_26412928
transcript_45612.known	chr15	-	4494	9	FSM	ENSG00000166206.15	ENST00000299267.8	4494	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_8	277.794635252375	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTCCTGTCTTTCCA	7397	False	NA	-7	True	AATAAA	-13	NA	26773788	26544784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26773644
transcript_45620.known	chr15	-	1900	7	FSM	ENSG00000166206.15	ENST00000400188.7	1900	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	384.245870360228	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGGCTGGGGTGAGCC	-1	True	NA	NA	False	NA	NA	NA	26629090	26547188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26628976
transcript_45622.known	chr15	-	406	4	FSM	ENSG00000166206.15	ENST00000554722.1	406	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	468.317793336486	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGCTGCTTCAGAGAGC	2	True	NA	NA	False	NA	NA	NA	26773751	26771818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_26771958_26772401_26772470_26772680_26772773_26773644
transcript_45625.known	chr15	+	2761	11	FSM	ENSG00000186297.12	ENST00000400081.7	2761	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	37.7311542362542	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	13	False	NA	16	True	AATAAA	-20	NA	26867125	26949207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_26867385_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_45629.known	chr15	+	2183	10	FSM	ENSG00000186297.12	ENST00000355395.9	2183	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	50.7849496515563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAAGTACTGCATGATC	194	False	NA	NA	False	AATGAA	-32	NA	26866910	26948752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_26867112_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_4563.nic	chr1	+	745	3	ISM	ENSG00000187147.18	ENST00000488865.2	860	4	245	0	-6	0	3prime_fragment	FALSE	canonical	3	276	junction_2	136	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCCCTCTTAAGGCTG	264	False	NA	19	True	ATTAAA	-22	NA	44632228	44636495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_44632386_44635544_44635667_44636029
transcript_45636.known	chr15	+	2553	11	FSM	ENSG00000186297.12	ENST00000335625.10	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	42.8113302759912	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	-13	True	NA	17	True	AATAAA	-21	NA	26867061	26949208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_45637.known	chr15	-	15364	93	FSM	ENSG00000128731.18	ENST00000261609.13	15364	93	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_70	52.0765486444192	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGCTGAGCTTTCTTA	-1	False	NA	NA	False	AATAAA	-16	NA	28322179	28111039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_45639.known	chr15	-	3121	21	FSM	ENSG00000128731.18	ENST00000564734.5	3121	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	34.1304849071911	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATTGATGAACAG	29	False	NA	8	True	AAAAAG	-13	NA	28322149	28254487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28298516_28298630_28299401_28299517_28321361_28321465_28322074
transcript_45641.nic	chr15	-	898	5	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	29	168779	-1	215	5prime_fragment	FALSE	canonical	3	67	junction_2	36.9754986443726	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGAGACAATGTCTTG	28	False	NA	-9	True	AATAAA	-18	NA	28322150	28279818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_45645.known	chr15	-	491	3	FSM	ENSG00000128731.18	ENST00000563945.1	491	3	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_1	54	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGGATGATGGGAT	59	False	NA	NA	False	NA	NA	NA	28322119	28320121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_28320465_28321361_28321465_28322074
transcript_45646.known	chr15	+	409	1	FSM	ENSG00000256338.2	ENST00000544920.2	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41025	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTATCT	-1	True	NA	17	True	AATAAA	-19	NA	28315650	28316059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_28315600_28316100
transcript_45650.known	chr15	+	3351	5	FSM	ENSG00000261377.6	ENST00000566178.5	3351	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	16.422164899915	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTTGGTTTTGGG	3	True	NA	NA	False	AATATA	-41	NA	28832320	28859007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_28832461_28833275_28833379_28838687_28838823_28846738_28846837_28856132
transcript_45653.known	chr15	+	480	3	FSM	ENSG00000261377.6	ENST00000563144.2	581	3	96	5	49	-5	multi-exon	FALSE	canonical	3	40	junction_2	1.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTATGTGTACAGTT	62	False	NA	30	True	AATATA	-26	NA	28832379	28838983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_28832461_28833275_28833379_28838687
transcript_45657.known	chr15	+	1954	6	FSM	ENSG00000034053.15	ENST00000382938.3	1954	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.6517521908176	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCTAT	0	True	NA	NA	False	NA	NA	NA	29070657	29102759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_29071100_29074920_29075002_29076054_29076092_29093074_29093221_29098489_29098577_29101598
transcript_45658.known	chr15	-	4963	11	FSM	ENSG00000104059.5	ENST00000261275.5	4963	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	17.3381083166532	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTCTCTGAGGTCTAA	-24	True	NA	-4	True	AATAAA	-18	NA	29570979	29120251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_29123656_29124686_29124762_29126266_29126492_29128788_29128865_29136365_29136502_29137033_29137195_29151733_29151842_29196429_29196565_29252367_29252479_29381774_29381832_29570504
transcript_4566.known	chr1	-	1472	3	FSM	ENSG00000126106.14	ENST00000372244.3	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-24	True	NA	-4	True	AATAAA	-20	NA	44674477	44635237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44636458_44645359_44645465_44674330
transcript_45660.known	chr15	+	2530	2	FSM	ENSG00000256802.3	ENST00000536835.3	2588	2	58	0	2	0	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGTGAGGCCGGGCA	-2	True	NA	NA	False	AAGAAA	-15	NA	29674989	29679168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_29675527_29677175
transcript_45662.nic	chr15	-	575	4	ISM	ENSG00000104067.17	ENST00000495972.6	2890	9	211	13161	177	-13161	5prime_fragment	FALSE	canonical	3	557	junction_1	18.2391520270726	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTATCTTTTCTCTGTA	170	False	NA	0	True	NA	NA	NA	29822291	29772063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_29772167_29773232_29773358_29800645_29800703_29822001
transcript_45663.known	chr15	-	7022	29	FSM	ENSG00000104067.17	ENST00000356107.11	7022	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_27	212.379857994191	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTAGGTGTGACTGAATT	23	True	NA	-110	True	AATACA	-18	NA	29968915	29700234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_29701690_29704161_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29719776_29720017_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29956231_29956365_29968666
transcript_45670.known	chr15	+	1158	5	FSM	ENSG00000178081.12	ENST00000568486.5	1158	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.34520787991171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAACTCTGGTTACTGC	NA	False	NA	NA	False	AAAAAG	-26	NA	30103731	30131757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30104009_30110301_30110427_30116891_30116939_30127684_30127764_30131127
transcript_45672.known	chr15	+	593	4	FSM	ENSG00000178081.12	ENST00000565158.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.96655480858378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATTCTGGAACCATGGC	NA	False	NA	NA	False	NA	NA	NA	30103719	30131227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30104009_30110301_30110427_30127684_30127764_30131127
transcript_45680.known	chr15	+	573	6	FSM	ENSG00000260128.6	ENST00000561753.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.41660919471891	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAACAGTCCCAGAACTCC	NA	False	NA	NA	False	TTTAAA	-37	NA	30572764	30600107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30573017_30579287_30579413_30582893_30582958_30585877_30585925_30596659_30596739_30600101
transcript_45687.known	chr15	-	970	2	FSM	ENSG00000247728.2	ENST00000501830.2	970	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGGTATTTCAGTCAATA	NA	False	NA	NA	False	AATATA	-20	NA	30625773	30616997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_30617245_30625050
transcript_45688.known	chr15	+	4849	15	FSM	ENSG00000198690.10	ENST00000362065.9	4849	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	30.3342771027585	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTCATGAATGCCTT	9	True	NA	NA	False	AATAAA	-25	NA	30903914	30943108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_4569.known	chr1	-	2075	2	FSM	ENSG00000126106.14	ENST00000476724.1	2075	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	11	True	NA	NA	False	AATAAA	-17	NA	44674442	44653246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44655210_44674330
transcript_45691.known	chr15	+	2738	4	FSM	ENSG00000198690.10	ENST00000561594.5	2738	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	89.1640186522693	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACACCTGTA	-9	True	NA	NA	False	ATTAAA	-22	NA	30903851	30911788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30903888_30904511_30905898_30908117_30908259_30910613
transcript_45692.known	chr15	+	2157	4	FSM	ENSG00000198690.10	ENST00000658773.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	88.6954840388669	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGTAACAATTTACCAAAA	3	True	NA	NA	False	NA	NA	NA	30903863	30911212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613
transcript_45694.known	chr15	+	2687	4	FSM	ENSG00000198690.10	ENST00000561607.6	2687	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	76.5259578327656	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTATAGAATCCTCATCT	-14	True	NA	16	True	AATAAA	-28	NA	30903891	30911640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30904025_30904511_30905898_30908117_30908259_30910613
transcript_45697.known	chr15	+	2304	4	FSM	ENSG00000198690.10	ENST00000565466.5	2304	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	44.9221548904324	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTCAGTTGAAAATTAC	-13	True	NA	NA	False	NA	NA	NA	30903892	30911271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613
transcript_45700.nnic	chr15	-	551	3	NNC	ENSG00000166912.17	novel	4985	16	NA	NA	-13	-25738	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	31.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTTTTATTCTGAGA	8305	False	30991655	NA	False	AATAAA	-23	NA	30991641	30986618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_30986914_30990776_30990838_30991446
transcript_45701.known	chr15	+	4354	16	FSM	ENSG00000198690.10	ENST00000667837.1	4354	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	69.7669135208246	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTTGCTTATAGCAAAT	NA	False	NA	NA	False	NA	NA	NA	30890558	30943050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30890565_30903894_30904012_30904511_30905354_30908117_30908259_30910613_30910816_30913857_30914092_30918082_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_45703.known	chr15	+	3090	5	FSM	ENSG00000198690.10	ENST00000654013.1	3090	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	80.7724427017037	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCGTCTCAAAAAAAAAA	-5	True	NA	NA	False	NA	NA	NA	30903900	30919368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30904025_30904511_30905898_30908117_30908259_30913857_30914092_30918163
transcript_45704.known	chr15	-	4985	16	FSM	ENSG00000166912.17	ENST00000435680.6	4985	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	11.2380306697096	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	-7	True	NA	-16	True	AATAAA	-18	NA	30991628	30938940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_30942073_30942889_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
transcript_45705.known	chr15	+	1450	2	FSM	ENSG00000259448.3	ENST00000559292.2	1450	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGATTCCTGCATTA	40	False	NA	NA	False	NA	NA	NA	31216019	31220720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_31216038_31219288
transcript_45706.known	chr15	+	2160	3	FSM	ENSG00000175344.19	ENST00000636295.1	2160	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGTGGTGCACACCTG	80	False	NA	NA	False	AATACA	-12	NA	32030594	32103267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32030650_32030897_32031038_32101302
transcript_45708.known	chr15	+	3152	13	FSM	ENSG00000198826.11	ENST00000543522.5	3152	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	130.338315122181	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGATGTACATGTTAGT	16	False	NA	11	True	AATAAA	-23	NA	32615570	32637903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32615608_32615804_32615919_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_4571.known	chr1	-	1579	4	FSM	ENSG00000126106.14	ENST00000372243.7	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	56.1921307262463	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-9	True	NA	-4	True	AATAAA	-20	NA	44674462	44635237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44636458_44645359_44645465_44660173_44660296_44674330
transcript_45712.nic	chr15	+	2337	12	NIC	ENSG00000198826.11	novel	2422	11	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	103.085858462138	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	282	False	NA	4	True	ATTAAA	-15	NA	32615426	32636181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_32615608_32615804_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_45716.known	chr15	+	5876	12	FSM	ENSG00000198826.11	ENST00000361627.8	5876	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_11	42.6040777158305	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTATCTAATAACAAC	-11	True	NA	11	True	AATAAA	-14	NA	32615503	32639941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_4572.known	chr1	-	2236	3	FSM	ENSG00000126106.14	ENST00000372237.8	2236	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	23.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-28	True	NA	NA	False	AATAAA	-17	NA	44674481	44653246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44655210_44660173_44660296_44674330
transcript_45721.known	chr15	+	2422	11	FSM	ENSG00000198826.11	ENST00000567348.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	39.188773902739	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	24	False	NA	4	True	ATTAAA	-15	NA	32615538	32636181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_45722.known	chr15	+	2279	11	FSM	ENSG00000198826.11	ENST00000563864.5	2279	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	108.392988703144	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTTATTAGAATTAAAT	10	False	NA	-29	True	NA	NA	NA	32615564	32636148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32633062_32633109_32633932_32634042_32635776
transcript_45723.nic	chr15	+	1906	10	NIC	ENSG00000198826.11	novel	3152	13	NA	NA	-77	-2957	combination_of_known_junctions	TRUE	canonical	3	36	junction_1	113.707226390117	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCATATTTGAGTCATAA	282	False	NA	7	True	AATAAA	-21	NA	32615426	32633191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_32615608_32615804_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978
transcript_45724.nic	chr15	+	2082	9	ISM	ENSG00000198826.11	ENST00000567348.5	2422	11	-91	2990	-56	-2957	5prime_fragment	FALSE	canonical	3	317	junction_7	36.3386846212132	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCATATTTGAGTCATAA	303	False	NA	7	True	AATAAA	-21	NA	32615447	32633191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978
transcript_45733.nnic	chr15	-	1220	3	NNC	ENSG00000262728.6	novel	434	2	NA	NA	-245	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCACTCTGGCTTTGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	32615403	32586104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_32586261_32603106_32603204_32614436
transcript_45734.known	chr15	-	434	2	FSM	ENSG00000262728.6	ENST00000613931.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCACTCTGGCTTTGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	32614714	32586104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_32586261_32614436
transcript_45737.known	chr15	+	1238	6	FSM	ENSG00000166922.9	ENST00000300175.9	1198	6	-34	-6	0	0	multi-exon	FALSE	canonical	3	31	junction_3	21.3766227454198	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	-38	True	NA	12	True	AATAAA	-21	NA	32641675	32697098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709_32691764_32696513
transcript_45739.known	chr15	+	1235	6	FSM	ENSG00000166922.9	ENST00000413748.6	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	11.5308282443197	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	-38	True	NA	12	True	AATAAA	-21	NA	32641675	32697098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709_32691764_32696513
transcript_45742.known	chr15	+	949	5	FSM	ENSG00000166922.9	ENST00000497208.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.9330975564312	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGATTTCTTGCA	-12	True	NA	12	True	AATAAA	-14	NA	32641701	32696889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32696513
transcript_45747.known	chr15	+	1148	5	FSM	ENSG00000166922.9	ENST00000494364.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	34.3729544845944	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGGCATATGGAGTTT	-15	True	NA	2	True	AATAAA	-11	NA	32641698	32697088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32696513
transcript_4575.known	chr1	-	117	1	FSM	ENSG00000199377.1	ENST00000362507.1	117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTCTGTTACTAAAGA	0	True	NA	-4	True	NA	NA	NA	44721902	44721785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44721800_44721900
transcript_45754.nnic	chr15	+	662	3	NNC	ENSG00000166922.9	novel	1148	5	NA	NA	-8	-24643	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	32.5	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATTTCTTTTTACTTTT	-46	True	NA	NA	False	ATTAAA	-14	NA	32641667	32667120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_32641779_32643585_32643819_32666802
transcript_45755.known	chr15	+	659	4	FSM	ENSG00000166922.9	ENST00000471027.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	27.3901847788988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCAGAAAGTCTGTCCT	1909	False	NA	NA	False	NA	NA	NA	32643622	32691909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32643819_32679765_32679916_32684556_32684670_32691709
transcript_45758.known	chr15	-	1633	6	FSM	ENSG00000169857.9	ENST00000306730.8	1633	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	15.0811140172071	806	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCCTTTCCTTTCTTGT	-69	True	NA	-3	True	AATAAA	-19	NA	34039204	33866226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_33866729_33867494_33867856_33870934_33871031_33875924_33875996_34003031_34003210_34038779
transcript_4576.known	chr1	+	2862	21	FSM	ENSG00000142945.13	ENST00000372224.9	2862	21	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	61.6200251541656	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGATGTGTCTGAG	-18	True	NA	29	True	AATAAA	-37	NA	44739836	44767767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753131_44753255_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907_44757972_44758048_44758141_44759205_44759349_44760279_44760485_44760591_44760703_44761915_44761984_44762345_44762452_44762544_44762659_44766825_44766950_44767096
transcript_45760.known	chr15	-	506	5	FSM	ENSG00000134153.10	ENST00000528949.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	266.722116630774	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAAGTGGGGCTGGCAA	116	False	NA	NA	False	AGTAAA	-4	NA	34101807	34084363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101764
transcript_45761.known	chr15	-	581	4	FSM	ENSG00000134153.10	ENST00000527822.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	306.933579495992	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTCCAGAGCTGGCATTT	116	False	NA	NA	False	AGTAAA	-38	NA	34101807	34084329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34101603
transcript_45763.known	chr15	-	1069	5	FSM	ENSG00000134153.10	ENST00000256545.9	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	29.8202951024969	4642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCTTTTTTTTTAC	1	True	NA	0	True	ATTAAA	-23	NA	34101862	34084016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
transcript_45780.known	chr15	-	436	5	FSM	ENSG00000134152.11	ENST00000559515.1	436	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	196.615106235508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATCATCCCTTTCCAAAT	-4	True	NA	NA	False	GATAAA	-32	NA	34210077	34153004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34153070_34154643_34154685_34163559_34163691_34198259_34198332_34209950
transcript_45781.known	chr15	-	575	4	FSM	ENSG00000134152.11	ENST00000558473.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	170.664062480131	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGGCTCACTGCAGCC	-2	True	NA	NA	False	NA	NA	NA	34154831	34148542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34148751_34152789_34153070_34154643_34154685_34154785
transcript_45783.known	chr15	-	1553	1	FSM	ENSG00000134152.11	ENST00000560915.1	1553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGAGTGGTTATTCTG	4	True	NA	NA	False	AATAAA	-33	NA	34210069	34208516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34208500_34210100
transcript_45784.known	chr15	-	2740	10	FSM	ENSG00000134152.11	ENST00000256544.8	2740	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	42.5858609817338	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTAGTTATCACTGTC	5	True	NA	-7	True	GATAAA	-23	NA	34210096	34140673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_45785.known	chr15	-	7286	25	FSM	ENSG00000140199.13	ENST00000290209.9	7286	25	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_24	5.79990421376844	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGGTTATGGTATAGT	20	True	NA	-7	True	AATAAA	-20	NA	34318779	34229995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34233973_34235180_34235315_34236014_34236200_34236707_34236816_34237418_34237551_34238231_34238402_34238964_34239161_34240660_34240830_34241232_34241338_34242101_34242222_34243973_34244073_34245284_34245404_34245692_34245868_34250297_34250356_34250630_34250730_34250898_34251058_34252169_34252385_34254347_34254590_34255261_34255393_34256228_34256284_34257641_34257789_34258812_34258945_34260925_34261021_34275344_34275390_34318560
transcript_45790.known	chr15	+	1006	5	FSM	ENSG00000128463.13	ENST00000558205.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	528.880598528628	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	17	True	NA	26	True	AATAAA	-31	NA	34225036	34230156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_34225201_34225535_34225659_34227692_34227847_34228428_34228590_34229752
transcript_45791.known	chr15	+	852	4	FSM	ENSG00000128463.13	ENST00000249209.8	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	550.97872513878	1834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	-7	True	NA	17	True	AATAAA	-22	NA	34225012	34230147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34229752
transcript_45792.known	chr15	+	709	3	FSM	ENSG00000128463.13	ENST00000560947.1	709	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	654.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	2632	False	NA	26	True	AATAAA	-31	NA	34227694	34230156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_34227847_34228436_34228590_34229752
transcript_45793.known	chr15	-	436	2	FSM	ENSG00000182117.6	ENST00000557912.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	0	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	17	True	NA	-6	True	ATTAAA	-20	NA	34343123	34341718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34342051_34343019
transcript_45794.known	chr15	-	507	2	FSM	ENSG00000182117.6	ENST00000328848.6	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	5576	junction_1	0	25221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	4	True	NA	-6	True	ATTAAA	-20	NA	34343136	34341718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34342109_34343019
transcript_45796.nnic	chr15	-	1963	15	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	48.2459684262608	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATATTGATGTTACCATT	503	False	NA	NA	False	ATTAAA	-15	NA	34367209	34358908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361168_34361230_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_45797.known	chr15	-	1719	15	NNC	ENSG00000176454.15	novel	2165	14	NA	NA	-64	-17	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	55.25525185123	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATGAAGTCCAGTC	667	False	NA	NA	False	TATAAA	-25	NA	34367045	34358925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364073_34364193_34364225_34364225_34364307_34365007_34365229_34365558_34365702_34366986
transcript_45802.known	chr15	-	2165	14	FSM	ENSG00000176454.15	ENST00000314891.11	2165	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	22.8151823218378	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTACCATTCCATATT	-20	True	NA	NA	False	ATTAAA	-13	NA	34367196	34358632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_45827.nic	chr15	-	1357	8	ISM	ENSG00000215252.12	ENST00000484716.5	6114	23	-22	11511	-22	7693	5prime_fragment	FALSE	canonical	3	43	junction_7	27.0653027369896	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGTTAATGGGCTTGT	-6	True	NA	NA	False	ATTAAA	-24	NA	34582882	34537164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34582749
transcript_45832.known	chr15	-	6114	23	FSM	ENSG00000215252.12	ENST00000484716.5	6114	23	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_22	45.8300174107295	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGCTAATAGTGGTA	1	True	NA	NA	False	AATAAA	-20	NA	34582860	34525653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34582749
transcript_45833.known	chr15	-	1382	7	FSM	ENSG00000159251.8	ENST00000290378.6	1382	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	41.4919670940452	586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCCTCTCGTTTGTTT	-1	True	NA	NA	False	AATAAA	-23	NA	34795549	34790229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34790556_34791113_34791296_34792089_34792282_34792407_34792570_34793244_34793570_34794679_34794831_34795505
transcript_45834.known	chr15	-	9597	35	FSM	ENSG00000021776.11	ENST00000156471.10	9597	35	0	0	0	0	multi-exon	TRUE	canonical	3	266	junction_23	38.1324068192265	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGGCTTTCTGTTCT	-14	True	NA	-4	True	AGTAAA	-21	NA	34969742	34851781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523_34867610_34870751_34870923_34873827_34874000_34874676_34874865_34875934_34876007_34882501_34882640_34884524_34884735_34886525_34886662_34890214_34890325_34893662_34893774_34896896_34896967_34897558_34897706_34900621_34900864_34904335_34904506_34906544_34906713_34910134_34910314_34915037_34915180_34918257_34918379_34920331_34920435_34927034_34927139_34930257_34930372_34932317_34932435_34934570_34934636_34938736_34938814_34940898_34941000_34942011_34942081_34944287_34944429_34948263_34948385_34952884_34952921_34960773_34960815_34964233_34964291_34969538
transcript_45838.nnic	chr15	-	682	3	NNC	ENSG00000021776.11	novel	9597	35	NA	NA	-103	-15531	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	198	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTACGTGTATAATTT	NA	False	NA	NA	False	AAAAAG	-9	NA	34969845	34963664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_34963983_34964233_34964291_34969538
transcript_45840.known	chr15	+	315	1	FSM	ENSG00000231409.3	ENST00000491307.1	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCATCTTTTATTAT	26	False	NA	NA	False	NA	NA	NA	34943079	34943394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_34943100_34943400
transcript_45844.known	chr15	-	563	2	FSM	ENSG00000198146.4	ENST00000559564.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCACAGAGGAAAGATGG	459	False	NA	NA	False	AAGAAA	-28	NA	34988225	34983037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34983491_34988115
transcript_45845.known	chr15	+	1734	1	FSM	ENSG00000279364.1	ENST00000623582.1	1734	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACCTAGTCATTGCCAT	8679	False	NA	NA	False	AATAAA	-41	NA	34978350	34980084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_34978400_34980100
transcript_45846.known	chr15	-	5439	3	FSM	ENSG00000198146.4	ENST00000356321.4	5439	3	0	0	0	0	multi-exon	FALSE	canonical	3	1186	junction_1	17.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTTTTTTTGGGG	-17	True	NA	-3	True	AATAAA	-16	NA	34988287	34978340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34983491_34987556_34987674_34988115
transcript_45859.known	chr15	-	2098	9	FSM	ENSG00000134146.12	ENST00000256538.9	2098	9	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_1	44.7267746992783	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTTTGTGTGAAGATA	7	True	NA	-4	True	AATAAA	-22	NA	35546165	35370879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_35372204_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
transcript_45870.known	chr15	-	3648	4	FSM	ENSG00000134146.12	ENST00000440392.3	3648	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	92.6318879580173	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGGTTTCTTCATGT	-20	True	NA	NA	False	AATAAA	-15	NA	35546192	35518993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_35522279_35538273_35538468_35542412_35542508_35546118
transcript_45871.known	chr15	+	2716	3	FSM	ENSG00000248079.3	ENST00000501169.3	2716	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAACTATATAACATTA	124	False	NA	NA	False	AATAAA	-9	NA	35546153	35860199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_35546474_35711706_35711890_35857986
transcript_45873.known	chr15	+	2240	12	FSM	ENSG00000186073.14	ENST00000437989.6	2240	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	15.0173453432031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	57	False	NA	1	True	AATAAA	-16	NA	36579843	36810244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
transcript_45874.known	chr15	+	2872	11	FSM	ENSG00000186073.14	ENST00000566621.6	2872	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	6.28410693734599	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	-13	True	NA	1	True	AATAAA	-16	NA	36579625	36810244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_45876.known	chr15	+	2506	10	FSM	ENSG00000186073.14	ENST00000642817.1	2506	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	17.4575322453881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTCTGTTTCAGTAT	13	True	NA	NA	False	ATTAAA	-44	NA	36579651	36809950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_36579962_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_45887.known	chr15	+	7270	7	FSM	ENSG00000166068.13	ENST00000299084.9	7270	7	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	20.6074420214316	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAATAGTGTTTCTTTT	11	True	NA	15	True	AATAAA	-19	NA	38252835	38357249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_38253218_38299372_38299548_38322240_38322410_38324762_38324810_38339736_38339896_38349421_38349524_38351013
transcript_45890.known	chr15	+	3111	7	FSM	ENSG00000171262.11	ENST00000491535.5	3111	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.7950549357115	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7	True	NA	NA	False	NA	NA	NA	38454153	38483665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291
transcript_45895.known	chr15	-	789	2	FSM	ENSG00000259345.7	ENST00000558277.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCAGCAATCCCGTTAC	7180	False	NA	NA	False	AATGAA	-17	NA	39420709	39419029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_39419653_39420543
transcript_45899.known	chr15	-	2816	12	FSM	ENSG00000150667.8	ENST00000350221.4	2816	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	3.3153786416019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTTGCTGGCACAT	-15	True	NA	NA	False	AATAAA	-22	NA	39782841	39600030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_39600927_39617734_39618246_39713443_39713582_39726588_39726748_39738090_39738202_39739664_39739790_39741804_39741901_39763820_39763915_39765591_39765747_39770426_39770611_39776398_39776532_39782627
transcript_45907.nic	chr15	-	1040	4	ISM	ENSG00000150667.8	ENST00000350221.4	2816	12	-12	165219	-12	-25585	5prime_fragment	FALSE	canonical	2	4	junction_3	3.68178700572909	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGAATTTCC	-27	True	NA	NA	False	NA	NA	NA	39782853	39765249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_39765747_39770426_39770611_39776398_39776532_39782627
transcript_45910.known	chr15	+	7789	22	FSM	ENSG00000137801.11	ENST00000260356.6	7789	22	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	10.6649658507957	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTGTTTCTTTCTGTC	2	True	NA	NA	False	TATAAA	-40	NA	39581078	39599466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_39581229_39581828_39581925_39582192_39582753_39583616_39583693_39583987_39584188_39584299_39584423_39585469_39585564_39587346_39587521_39588041_39588219_39588525_39588700_39588958_39589087_39589201_39589355_39589804_39590024_39590515_39590624_39591190_39591351_39591504_39591624_39592567_39592803_39592999_39593228_39593396_39593669_39594098_39594197_39594300_39594441_39595361
transcript_45912.known	chr15	-	3912	3	FSM	ENSG00000166073.11	ENST00000561100.2	3912	3	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_2	96	1964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTTTATGAGCTATA	-4	True	NA	7	True	AATAAA	-28	NA	39920266	39799007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_39802255_39807005_39807259_39919854
transcript_45914.known	chr15	+	2730	2	FSM	ENSG00000246863.2	ENST00000499797.2	2730	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTGTTGGTTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	39921041	39924899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_39921659_39922786
transcript_45915.known	chr15	+	5538	39	FSM	ENSG00000128829.12	ENST00000263791.10	5538	39	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_12	46.3568373726157	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGCTTTTTAATTGTA	-30	True	NA	24	True	AATAAA	-13	NA	39934114	40035591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903_39953985_39955619_39955769_39961783_39961900_39965685_39965844_39967343_39967880_39972907_39973015_39973591_39973750_39976413_39976845_39978077_39978148_39985804_39985889_39987982_39988106_39990272_39990378_39992174_39992230_39992768_39992849_39996963_39997066_39998730_39998785_40000987_40001225_40002712_40002789_40003192_40003315_40007015_40007066_40008026_40008196_40009613_40009731_40011280_40011347_40016501_40016673_40017107_40017243_40019092_40019201_40020898_40021028_40022518_40022606_40025976_40026090_40029405_40029465_40030358_40030457_40032168_40032238_40032756_40032802_40034325_40034445_40035026
transcript_45920.known	chr15	+	687	4	FSM	ENSG00000128829.12	ENST00000560648.1	687	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	238.86444319367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATTGATTTCTACAGA	31	True	NA	NA	False	AATAAA	-20	NA	39934175	39946895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39946588
transcript_45930.known	chr15	-	468	4	FSM	ENSG00000140319.11	ENST00000560773.5	468	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3908.32106607883	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTTTTCACATAAGAT	14	True	NA	NA	False	NA	NA	NA	40039156	40036242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40039092
transcript_45931.known	chr15	-	780	4	FSM	ENSG00000140319.11	ENST00000558720.5	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	7479	junction_1	651.114087971959	41781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTCTCTTTATTCCT	120	False	NA	-14	True	ATTAAA	-15	NA	40039050	40036041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875
transcript_45932.known	chr15	-	1119	5	FSM	ENSG00000140319.11	ENST00000267884.11	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	6703	junction_4	794.831546618527	64540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATTACAGCCAAGGG	-11	True	NA	45	True	NA	NA	NA	40039181	40035689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
transcript_45933.known	chr15	-	791	6	FSM	ENSG00000140319.11	ENST00000558527.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3536.62785149922	2322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCTTTATTCCTT	6	True	NA	-13	True	ATTAAA	-16	NA	40039164	40036040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40036501_40036985_40037019_40037308_40037349_40038281_40038395_40038875_40038949_40039092
transcript_45944.known	chr15	+	669	4	FSM	ENSG00000248508.9	ENST00000560341.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.4571575998762	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTCCTCCTAATTTT	44	True	NA	NA	False	TATAAA	-23	NA	40039348	40057000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40056452_40056642_40056729
transcript_45945.known	chr15	+	1058	4	FSM	ENSG00000248508.9	ENST00000667323.1	1058	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	13.8884444373331	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	-14	True	NA	NA	False	ATTAAA	-19	NA	40039290	40065705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40064295_40064602_40065220
transcript_45949.known	chr15	+	879	4	FSM	ENSG00000248508.9	ENST00000668306.2	942	4	60	3	0	0	multi-exon	FALSE	canonical	3	7	junction_2	14.8398861930347	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	0	True	NA	NA	False	ATTAAA	-19	NA	40039304	40065705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40064460_40064602_40065220
transcript_45956.known	chr15	+	568	3	FSM	ENSG00000248508.9	ENST00000660446.2	613	3	45	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	14	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCCTAATTTTTCC	0	True	NA	NA	False	TATAAA	-26	NA	40039304	40057003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40056688
transcript_45959.known	chr15	+	2538	3	FSM	ENSG00000248508.9	ENST00000504245.7	2560	3	22	0	5	0	multi-exon	FALSE	canonical	3	15	junction_2	13.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATGTTTAATAGTT	-9	True	NA	-11	True	AATAAA	-6	NA	40039295	40067496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40065220
transcript_45963.nic	chr15	+	354	2	ISM	ENSG00000248508.9	ENST00000660446.2	613	3	-6	10884	-6	-10881	5prime_fragment	FALSE	canonical	3	42	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGAAAAGCTAGGTTTC	2881	False	NA	NA	False	TATAAA	-21	NA	40039253	40046119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_40039449_40045960
transcript_45966.known	chr15	+	3669	23	FSM	ENSG00000156970.13	ENST00000287598.11	3669	23	0	0	0	0	multi-exon	TRUE	canonical	3	565	junction_5	70.7227154409306	1274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	15	True	NA	15	True	AATAAA	-16	NA	40161068	40221123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_45967.known	chr15	-	1641	6	FSM	ENSG00000137841.12	ENST00000559381.5	1641	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.04648658313239	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTTAAGCCTGGTCT	6590	False	NA	-9	True	ATTAAA	-18	NA	40291329	40287907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40288919_40289271_40289359_40290024_40290083_40290576_40290673_40290760_40290838_40291017
transcript_45970.known	chr15	-	517	4	FSM	ENSG00000137841.12	ENST00000559671.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	18.624953392932	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTACTCCTTACTTTA	7247	False	NA	NA	False	AGTAAA	-16	NA	40290672	40284255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40284532_40289271_40289359_40290024_40290083_40290576
transcript_45976.known	chr15	-	442	1	FSM	ENSG00000273855.1	ENST00000622487.1	442	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCAGCTCTTTCCCTGAC	5404	False	NA	NA	False	AATAAA	-15	NA	40285909	40285467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40285500_40285900
transcript_45977.known	chr15	-	1763	8	FSM	ENSG00000137841.12	ENST00000543785.3	1763	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.81395937194174	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCGATGTCAGGCTG	29	False	NA	NA	False	AGTAAA	-17	NA	40307910	40300666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40301610_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
transcript_45978.nnic	chr15	+	839	3	NNC	ENSG00000259330.3	novel	594	2	NA	NA	-636	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGTAAGTTGATCATT	885	False	NA	24	True	AATACA	-20	NA	40324579	40326715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_40324958_40325348_40325489_40326394
transcript_45979.known	chr15	+	1388	9	FSM	ENSG00000128944.14	ENST00000561169.5	1388	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	156.330379325325	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAACAATACACCTTG	8	True	NA	32	True	AATAAA	-32	NA	40382978	40394160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389488_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_45980.known	chr15	+	665	3	FSM	ENSG00000128944.14	ENST00000559591.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	214	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGTCAATGAAGAGTG	-30	True	NA	NA	False	AATACA	-15	NA	40382940	40384922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40383045_40383227_40383323_40384456
transcript_45987.known	chr15	+	4350	12	FSM	ENSG00000128928.10	ENST00000487418.8	4350	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_7	46.5507809452384	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAGCCTGAGTGGTAA	-15	True	NA	10	True	AATAAA	-36	NA	40405794	40421308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_45993.known	chr15	+	4251	11	FSM	ENSG00000128928.10	ENST00000479013.7	4251	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	123.608616204535	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGAACCATGCAGCCT	-15	True	NA	1	True	AATAAA	-27	NA	40405794	40421299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40405972_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_46.known	ERCC-00099	+	1344	1	FSM	ERCC-00099A	DQ875387	1344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00099_+_0_1300
transcript_46000.known	chr15	+	4665	12	FSM	ENSG00000128928.10	ENST00000651168.1	4665	12	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_7	46.5507809452384	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGAGTGGTAAATGGA	6151	False	NA	15	True	AATAAA	-41	NA	40405484	40421313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_46001.known	chr15	+	668	5	FSM	ENSG00000128928.10	ENST00000610693.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	166.149593740099	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGGCCACTCTCAACT	-15	True	NA	NA	False	NA	NA	NA	40405794	40411351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40405972_40407635_40407813_40407938_40407991_40410627_40410798_40411259
transcript_46003.known	chr15	-	677	5	FSM	ENSG00000128891.16	ENST00000559911.5	677	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	29.6057426861749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATCACTTCCTCACTTT	11	True	NA	NA	False	NA	NA	NA	40565011	40534899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40535011_40539238_40539356_40557215_40557373_40562771_40563028_40564975
transcript_46007.known	chr15	-	576	4	FSM	ENSG00000128891.16	ENST00000558113.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.7248384425711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGGGCCAGGCAGGGATG	11	True	NA	NA	False	NA	NA	NA	40565011	40539228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40539356_40557215_40557373_40562771_40563028_40564975
transcript_46013.known	chr15	-	814	4	FSM	ENSG00000128891.16	ENST00000558750.5	814	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.5497436689865	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	135	False	NA	NA	False	AGTAAA	-29	NA	40564980	40553941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40554128_40557215_40557373_40562771_40563028_40564765
transcript_46014.known	chr15	-	557	4	FSM	ENSG00000128891.16	ENST00000559103.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	26.0895892391327	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGCCAGCAGCCGGG	8	True	NA	NA	False	NA	NA	NA	40565014	40554017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40554128_40557215_40557373_40562771_40563023_40564975
transcript_46017.known	chr15	-	349	3	FSM	ENSG00000128891.16	ENST00000558918.1	349	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGTAAATTACACACAC	3	True	NA	NA	False	NA	NA	NA	40565019	40553979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40554128_40557215_40557373_40564975
transcript_46019.known	chr15	-	1075	3	FSM	ENSG00000128891.16	ENST00000558871.1	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	3.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATCTGCCTGCCTCGGC	-20	True	NA	NA	False	NA	NA	NA	40565042	40556620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40557373_40562771_40563028_40564975
transcript_4602.known	chr1	+	778	6	FSM	ENSG00000142937.12	ENST00000396651.8	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	7586	junction_1	1650.31177660465	141610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	-26	True	NA	52	True	AATATA	-21	NA	44775539	44778779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44775601_44776033_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
transcript_46020.known	chr15	-	343	3	FSM	ENSG00000128891.16	ENST00000560109.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTCAGTACCCTGT	-13	True	NA	NA	False	TTTAAA	-13	NA	40565035	40561980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40562008_40562771_40563028_40564975
transcript_46021.known	chr15	+	2365	3	FSM	ENSG00000166133.18	ENST00000315616.12	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0.5	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGTCTCTGTTTCCCTT	-22	True	NA	14	True	TATAAA	-21	NA	40569298	40574949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40569944_40571603_40571901_40573526
transcript_46023.known	chr15	+	1558	3	FSM	ENSG00000166133.18	ENST00000559271.1	1558	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	83.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGACGGGCTTCTAA	11	True	NA	-67	True	NA	NA	NA	40569331	40574358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40569761_40571603_40571901_40573526
transcript_46027.known	chr15	+	631	1	FSM	ENSG00000166133.18	ENST00000616318.1	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCTCGCTTTCATTTGG	116	False	NA	21	True	ATTAAA	-18	NA	40569436	40570067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40569400_40570100
transcript_4603.known	chr1	+	685	6	FSM	ENSG00000142937.12	ENST00000372209.3	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	4302.76963826789	6688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	7	True	NA	52	True	AATATA	-21	NA	44775572	44778779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44775601_44776033_44776141_44776674_44776715_44777613_44777790_44777999_44778130_44778575
transcript_46032.known	chr15	+	5923	10	FSM	ENSG00000137812.21	ENST00000533001.1	5923	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	3.02254900194121	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTTATTTTGCCAA	-4	True	NA	NA	False	NA	NA	NA	40594264	40626042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40594393_40602914_40602967_40605109_40605150_40606392_40606453_40608846_40608909_40610244_40610298_40611477_40611512_40615340_40615379_40618958_40619012_40620639
transcript_4604.known	chr1	+	898	3	FSM	ENSG00000142937.12	ENST00000464658.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	11081	junction_1	197.5	5409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	1180	False	NA	52	True	AATATA	-21	NA	44777225	44778779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44777790_44777999_44778130_44778575
transcript_46045.known	chr15	+	2436	10	FSM	ENSG00000051180.17	ENST00000267868.8	2436	10	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	41.7854602865402	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	-2	True	NA	14	True	AATAAA	-15	NA	40695173	40732340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_46048.nic	chr15	+	1628	10	NIC	ENSG00000051180.17	novel	2436	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	121.691778230449	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTCTGCACAGATTCTT	NA	False	NA	17	True	AATAAA	-26	NA	40695131	40731594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_40695322_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_4605.known	chr1	-	385	1	FSM	ENSG00000234093.3	ENST00000594193.1	385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGGGATGTAATACATAT	7454	False	NA	NA	False	AAAACA	-30	NA	44780715	44780330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44780300_44780700
transcript_46050.known	chr15	+	1611	9	FSM	ENSG00000051180.17	ENST00000423169.6	1611	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	122.195284278895	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTCTGCACAGATTC	NA	False	NA	15	True	AATAAA	-24	NA	40695128	40731592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40731054
transcript_46053.known	chr15	+	1545	9	FSM	ENSG00000051180.17	ENST00000525066.5	1545	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_5	129.069688056491	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAAAATAAAATGCCTCA	11	True	NA	-20	True	ACTAAA	-39	NA	40695186	40731557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_4607.nnic	chr1	-	737	2	NNC	ENSG00000142959.5	novel	2512	9	NA	NA	3195	1745	intron_retention	FALSE	canonical	3	7	junction_1	0	78	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCTTGCATATATTTGA	3194	False	NA	-4	True	AATAAA	-22	NA	44784975	44781839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_44782230_44784628
transcript_46071.known	chr15	-	1242	4	FSM	ENSG00000245849.8	ENST00000650326.1	1242	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.02768199119819	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGTTTTATGGCTCA	5	True	NA	-84	True	AATAAA	-4	NA	40695093	40686242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40687147_40687798_40687845_40694585_40694796_40695011
transcript_46075.known	chr15	-	718	3	FSM	ENSG00000245849.8	ENST00000533146.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTGGACGGAACAGAG	2	True	NA	NA	False	NA	NA	NA	40695096	40686723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40687147_40694585_40694796_40695011
transcript_46076.known	chr15	-	1151	2	FSM	ENSG00000245849.8	ENST00000499988.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGCTGGGCGTGGTG	-9	True	NA	NA	False	NA	NA	NA	40695107	40693740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40694796_40695011
transcript_46077.known	chr15	-	1962	3	FSM	ENSG00000245849.8	ENST00000526635.2	1962	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACCCAGCTTTAAAATT	-3	True	NA	-24	True	NA	NA	NA	40695101	40686182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40687845_40694585_40694796_40695011
transcript_46079.nic	chr15	-	2182	13	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	30	0	intron_retention	TRUE	canonical	3	31	junction_12	39.3032194044655	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	NA	False	NA	-16	True	AATAAA	-16	NA	40755306	40735886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755198
transcript_46088.known	chr15	-	2246	13	FSM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_10	17.095117886565	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-12	True	NA	-16	True	AATAAA	-16	NA	40755254	40735886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755082
transcript_46089.known	chr15	-	2139	14	FSM	ENSG00000137824.16	ENST00000558777.5	2139	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	45.4614733827466	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCTCTTTATTCTTACT	-4	True	NA	-17	True	AATAAA	-15	NA	40755246	40735887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754631_40754728_40754791_40755082
transcript_46095.known	chr15	+	2059	11	FSM	ENSG00000166140.17	ENST00000564258.5	2059	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.7741801075232	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCCAGCATCTCATTTC	8	True	NA	24	True	AATAAA	-15	NA	40807088	40814565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40807672_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_46097.known	chr15	+	2775	11	FSM	ENSG00000166140.17	ENST00000355341.8	2775	11	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	18.52160900138	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCATCACTTTTGGT	8	True	NA	NA	False	TATAAA	-22	NA	40807088	40815084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_46099.known	chr15	+	1486	11	FSM	ENSG00000166140.17	ENST00000561768.5	1486	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.7741801075232	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTGGCACTTAGTGG	22	True	NA	-20	True	NA	NA	NA	40807767	40814521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40807822_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_4610.known	chr1	-	1900	12	FSM	ENSG00000070785.17	ENST00000360403.7	1900	12	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	56.0072309381152	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	-4	True	NA	NA	False	NA	NA	NA	44986595	44850521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44851004_44857703_44857808_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_46103.known	chr15	+	1555	10	FSM	ENSG00000166140.17	ENST00000299173.14	1555	10	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	24.2904238612261	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	509	False	NA	28	True	AATAAA	-19	NA	40807589	40814569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_46116.known	chr15	+	626	3	FSM	ENSG00000137880.6	ENST00000559445.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	260.5	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGGCTGCGCCTGT	43	False	NA	7	True	AATAAA	-7	NA	40764126	40767699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40764217_40765859_40765922_40767225
transcript_46118.known	chr15	+	695	3	FSM	ENSG00000137880.6	ENST00000559932.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	263.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGCGGCCCTGGCGCGT	342	False	NA	-50	True	NA	NA	NA	40764425	40767642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40764609_40765826_40765922_40767225
transcript_46119.known	chr15	+	412	2	FSM	ENSG00000137880.6	ENST00000558670.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGGTGCTCCCAGCTG	39	False	NA	NA	False	NA	NA	NA	40764122	40767543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40764217_40767225
transcript_46121.known	chr15	+	727	3	FSM	ENSG00000137880.6	ENST00000260447.6	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	20	2590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	-16	True	NA	16	True	AATAAA	-16	NA	40764067	40767708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40764217_40765826_40765922_40767225
transcript_46122.known	chr15	-	3721	11	FSM	ENSG00000104129.10	ENST00000220496.9	3721	11	0	0	0	0	multi-exon	TRUE	canonical	3	205	junction_6	13.6091880727691	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCACTTTGGGGGGC	-6	True	NA	NA	False	AATAAA	-19	NA	40807473	40765160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_46123.known	chr15	+	785	2	FSM	ENSG00000137880.6	ENST00000558467.1	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	1536	False	NA	16	True	AATAAA	-16	NA	40765619	40767708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40765922_40767225
transcript_46124.known	chr15	-	529	5	FSM	ENSG00000104129.10	ENST00000561110.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	11.6270159542335	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTACCTCTATCCCA	1266	False	NA	-3	True	AATAAA	-15	NA	40775621	40767872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552
transcript_46125.known	chr15	+	2978	11	FSM	ENSG00000166145.15	ENST00000562057.6	2978	11	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_5	129.925209255171	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTCGTTTATTCAGTGA	2	True	NA	NA	False	NA	NA	NA	40844047	40858207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853882_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_46126.known	chr15	+	3056	11	FSM	ENSG00000166145.15	ENST00000344051.8	3056	11	0	0	0	0	multi-exon	TRUE	canonical	3	298	junction_5	165.336142449254	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTCGTTTATTCAGTGA	7968	False	NA	NA	False	NA	NA	NA	40844017	40858207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40844187_40844489_40845030_40853123_40853252_40853488_40853628_40853710_40853930_40854059_40854087_40854396_40854523_40854638_40854690_40855891_40856063_40856275_40856324_40856769
transcript_46130.nnic	chr15	-	1082	3	NNC	ENSG00000261183.6	novel	643	3	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	73.5	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	NA	False	NA	-1	True	AATAAA	-24	NA	40844452	40835992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_40836283_40838168_40838687_40844178
transcript_46131.known	chr15	-	643	3	FSM	ENSG00000261183.6	ENST00000564302.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	55.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	3	True	NA	-1	True	AATAAA	-24	NA	40844387	40835992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40836283_40838542_40838687_40844178
transcript_46134.known	chr15	-	629	2	FSM	ENSG00000261183.6	ENST00000565315.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACAAAAATGTTCAGC	-5	True	NA	NA	False	TATAAA	-38	NA	40844332	40835807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40836283_40844178
transcript_46135.known	chr15	-	470	2	FSM	ENSG00000261183.6	ENST00000568525.2	579	2	109	0	-16	0	multi-exon	FALSE	canonical	3	158	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGCCCACTAATTC	90	False	NA	73	True	AATAAA	-19	NA	40844300	40838338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40838687_40844178
transcript_46137.nic	chr15	-	1432	2	ISM	ENSG00000104140.7	ENST00000220507.5	1650	3	407	0	407	0	3prime_fragment	FALSE	canonical	3	26	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGCGTTGTCTCTGTCA	403	False	NA	-3	True	AATAAA	-17	NA	40873827	40872213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_40873502_40873683
transcript_46138.known	chr15	+	163	1	FSM	ENSG00000274798.1	ENST00000612411.1	163	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGCATATGTTTGCAT	NA	False	NA	NA	False	ATTAAA	-25	NA	40874432	40874595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40874400_40874600
transcript_46141.known	chr15	+	3875	5	FSM	ENSG00000104142.11	ENST00000220509.10	3875	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	13.7363568678162	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	-14	True	NA	15	True	ATTAAA	-15	NA	40894449	40903975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40901015_40902615
transcript_46142.known	chr15	+	873	4	FSM	ENSG00000104142.11	ENST00000558474.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	86.1097490931711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCCAGGAGCTGCAGCG	3	True	NA	NA	False	NA	NA	NA	40894466	40902861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40902615
transcript_46144.nnic	chr15	+	1252	3	NNC	ENSG00000104142.11	novel	873	4	NA	NA	-35	-2567	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	90	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAAAAAAAACTGTT	-10	True	NA	NA	False	AAAAAG	-6	NA	40894414	40896830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_40894860_40895937_40896080_40896165
transcript_46146.nic	chr15	+	1350	2	ISM	ENSG00000104142.11	ENST00000558855.5	1050	5	-37	2555	-35	-2555	5prime_fragment	FALSE	canonical	3	182	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTTTAGGAGTGTAGA	-10	True	NA	NA	False	AAAAAG	-18	NA	40894414	40896842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_40894860_40895937
transcript_46147.known	chr15	+	1204	4	FSM	ENSG00000128965.13	ENST00000444189.7	1204	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	207.895807236862	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACTCCAGTGCACAAGA	NA	False	NA	NA	False	GGGGCT	-43	NA	40952961	40955822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40953815_40954227_40954264_40955372_40955415_40955549
transcript_46148.known	chr15	+	1520	3	FSM	ENSG00000128965.13	ENST00000617768.5	1520	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	2	2051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTGTGCCGGAATGT	-2	True	NA	12	True	CATAAA	-13	NA	40953470	40956512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40953815_40954227_40954264_40955372
transcript_46150.known	chr15	+	3201	7	FSM	ENSG00000187446.12	ENST00000334660.10	3201	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	2.3629078131263	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTCCATTTTACA	-8	True	NA	NA	False	AATAAA	-21	NA	41231267	41281887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
transcript_46152.nic	chr15	+	846	6	NIC	ENSG00000187446.12	novel	568	6	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	34.6606405018719	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTATGAGGCTAGCG	-1	True	NA	8	True	AATAAA	-22	NA	41231143	41272375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41272179
transcript_46153.nnic	chr15	+	1359	4	NNC	ENSG00000187446.12	novel	572	5	NA	NA	0	-4292	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	42.7109145561439	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTTGTCAAGTAGATT	-37	True	NA	NA	False	AATAAA	-17	NA	41231238	41258574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_41231450_41243666_41243740_41256909_41256991_41257580
transcript_46154.nic	chr15	+	851	2	ISM	ENSG00000187446.12	ENST00000560784.5	717	7	-78	34629	4	-18655	5prime_fragment	FALSE	canonical	3	88	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCGGAACTATGACAAT	-1	True	NA	NA	False	NA	NA	NA	41231143	41244211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_41231450_41243666
transcript_46156.known	chr15	+	1934	10	FSM	ENSG00000137804.14	ENST00000558123.5	1934	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	883.602530609077	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATCTGTCACTCACTATA	NA	False	NA	-34	True	NA	NA	NA	41332693	41380747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41332996_41342385_41342455_41349097_41349242_41351032_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41377195_41377305_41380092
transcript_4616.known	chr1	-	1923	11	FSM	ENSG00000070785.17	ENST00000620860.4	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	109.698176830793	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACGCCTGAGCATCAGC	5532	False	NA	NA	False	NA	NA	NA	44986722	44850521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44851004_44874677_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_46179.known	chr15	+	8829	4	FSM	ENSG00000247556.6	ENST00000500949.6	8829	4	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_3	91.2006335260647	1854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	6	True	NA	36	True	AATAAA	-28	NA	41284004	41306534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040
transcript_46180.known	chr15	+	1384	5	FSM	ENSG00000247556.6	ENST00000501665.2	1384	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	466.77778438996	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTGGTACAGGATCAG	33	False	NA	NA	False	AATAAA	-18	NA	41284031	41309737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719
transcript_46181.known	chr15	+	2347	15	FSM	ENSG00000285920.2	ENST00000668616.1	2347	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	825.28295704181	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTCTAACATTGCTTAC	8	True	NA	9	True	AATAAA	-10	NA	41284006	41380790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719_41308842_41342385_41342455_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_46182.known	chr15	+	1482	4	FSM	ENSG00000247556.6	ENST00000557993.5	1482	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	455.511678103744	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTGTATGTATATGT	32	False	NA	16	True	AATAAA	-18	NA	41284030	41289155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287982
transcript_46183.known	chr15	-	1201	5	FSM	ENSG00000104147.9	ENST00000220514.8	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_2	23.8012604708238	1436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTCTTTTTCAGT	-14	True	NA	NA	False	AATAAA	-15	NA	41332591	41309272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41309850_41313272_41313355_41319657_41319781_41331914_41331982_41332239
transcript_46184.known	chr15	+	2409	11	FSM	ENSG00000137804.14	ENST00000260359.10	2409	11	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_3	553.838324784409	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	NA	False	NA	25	True	AATAAA	-22	NA	41332693	41381050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41351032_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_46185.known	chr15	+	2256	11	FSM	ENSG00000137804.14	ENST00000560747.5	2256	11	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	659.193567929785	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	9	True	NA	25	True	AATAAA	-22	NA	41332885	41381050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_46186.known	chr15	+	2232	11	FSM	ENSG00000137804.14	ENST00000560177.5	2232	11	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	668.855208546663	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	36	False	NA	25	True	AATAAA	-22	NA	41332912	41381050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_46187.known	chr15	+	5021	18	FSM	ENSG00000137815.15	ENST00000389629.9	5030	18	9	0	9	0	multi-exon	FALSE	canonical	2	383	junction_16	78.3725024160138	1658	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTGAGTCTAAGGATT	NA	False	NA	NA	False	AATAAA	-25	NA	41417103	41483563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671_41457877_41464770_41464886_41466140_41466253_41470256_41470393_41471171_41471350_41474619_41474703_41475524_41475613_41475711_41475820_41476445_41476524_41477164_41477287_41477457_41477516_41478547_41478626_41479102_41479199_41480213_41480326_41480580
transcript_46204.known	chr15	-	1509	5	FSM	ENSG00000137806.10	ENST00000260361.9	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	32.7146756059112	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-7	True	NA	-6	True	AATAAA	-23	NA	41402496	41387352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402143
transcript_46205.known	chr15	-	1482	6	FSM	ENSG00000137806.10	ENST00000678745.1	1482	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	58.7761856537152	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAACCCAAGGCTTTTT	-3	True	NA	-55	True	NA	NA	NA	41402492	41387469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41387594_41388447_41388523_41394264_41394359_41394858_41395045_41396486_41397141_41402143
transcript_46206.known	chr15	-	1469	4	FSM	ENSG00000137806.10	ENST00000679240.1	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	59.0987873536054	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	29	True	NA	NA	False	NA	NA	NA	41402460	41394046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41394359_41394858_41395045_41396486_41397141_41402143
transcript_46207.known	chr15	-	1012	5	FSM	ENSG00000137806.10	ENST00000676906.1	1012	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.772867889869	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	6	True	NA	-6	True	AATAAA	-23	NA	41402483	41387352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41396960_41402446
transcript_46210.known	chr15	-	4663	25	FSM	ENSG00000103932.12	ENST00000304330.9	4663	25	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_24	29.04115853214	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	3	True	NA	-4	True	AATAAA	-21	NA	41544257	41517175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522251_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
transcript_46217.known	chr15	+	332	2	FSM	ENSG00000259838.1	ENST00000566760.1	332	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATTATAATAAACT	72	False	NA	NA	False	NA	NA	NA	41557026	41557435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41557169_41557245
transcript_4622.known	chr1	-	1457	10	FSM	ENSG00000070785.17	ENST00000372183.7	1457	10	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	28.5579333208052	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCAAAAACTTTACTAGG	4	True	NA	-5	True	AATAAA	-21	NA	44986587	44874526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_46223.known	chr15	+	7888	22	FSM	ENSG00000174197.18	ENST00000570161.6	7888	22	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	17.1004767142579	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACAAAAAAGAAAAAAGAAG	255	False	NA	NA	False	AAAACA	-15	NA	41621491	41762194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41621590_41668827_41669959_41696074_41697024_41698862_41698942_41699063_41699160_41707727_41707860_41708103_41708209_41710690_41711350_41713150_41713497_41727179_41727407_41729163_41729350_41734521_41734595_41736180_41736699_41739905_41740204_41742545_41743173_41748636_41748928_41749110_41750616_41754436_41754568_41757787_41757840_41760322_41760530_41761738_41761851_41762128
transcript_46235.known	chr15	+	1409	8	FSM	ENSG00000243789.11	ENST00000397299.9	1409	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	19.8484050662382	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	-18	True	NA	13	True	AATAAA	-13	NA	41828091	41837581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_46240.known	chr15	+	1192	7	FSM	ENSG00000243789.11	ENST00000408047.5	1192	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	54.6707315561891	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCCTGTCAGTAAAG	-8	True	NA	NA	False	NA	NA	NA	41828101	41837452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41828189_41834893_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_46244.known	chr15	-	6401	6	FSM	ENSG00000103966.11	ENST00000220325.9	6401	6	0	0	0	0	multi-exon	TRUE	canonical	3	369	junction_4	32.9824195595169	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCACTTGAGATTTTAGT	2	True	NA	NA	False	AATAAA	-30	NA	41972557	41895932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41901182_41909698_41909864_41919209_41919623_41943066_41943165_41953763_41953941_41972258
transcript_46246.known	chr15	+	3331	25	FSM	ENSG00000168970.22	ENST00000382448.8	3331	25	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_6	38.2573295446623	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGGCGCTGAGACCATC	6	True	NA	20	True	NA	NA	NA	41828115	41848143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41840157_41840231_41840523_41840661_41840773_41840906_41841054_41841096_41841230_41841274_41841516_41841572_41841818_41841950_41842192_41842277_41842553_41842592_41843675_41843812_41844470_41844608_41844847_41845071_41845202_41845321_41845637_41845776_41845942_41846048_41846202_41846383_41846668_41846836_41847336_41847524_41847648
transcript_46249.known	chr15	-	4832	25	FSM	ENSG00000166887.16	ENST00000318006.10	4832	25	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	24.3441756666536	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTCTTATTTCTCC	-3	True	NA	NA	False	AATAAA	-27	NA	42208304	42158700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42160830_42161681_42161774_42162031_42162167_42162331_42162482_42163349_42163396_42163625_42163729_42164357_42164487_42164995_42165114_42165717_42165817_42166158_42166233_42166562_42166650_42166771_42166914_42167393_42167538_42169723_42169867_42173722_42173853_42178217_42178339_42178449_42178571_42184516_42184701_42187270_42187364_42187757_42187857_42189113_42189209_42191124_42191168_42191495_42191561_42199895_42199962_42208080
transcript_46250.known	chr15	-	593	3	FSM	ENSG00000166887.16	ENST00000568357.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	12.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTGGTCCCTTTTTATTA	-6	True	NA	NA	False	NA	NA	NA	42208307	42191260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42191561_42199895_42199962_42208080
transcript_46258.known	chr15	-	3049	19	FSM	ENSG00000103978.16	ENST00000448392.5	3049	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	80.2367830737542	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTAGATTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	42273584	42210451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42273254
transcript_46286.nic	chr15	-	970	5	ISM	ENSG00000103994.18	ENST00000565380.5	5677	20	-29	31505	7	0	5prime_fragment	FALSE	canonical	3	45	junction_2	40.5115724207294	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAATAAAAGAAGGAA	-6	True	NA	NA	False	NA	NA	NA	42491134	42446625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_42446659_42448071_42448706_42466052_42466115_42472235_42472322_42490979
transcript_46287.nic	chr15	-	1539	5	ISM	ENSG00000103994.18	ENST00000564754.7	10396	22	-54	38158	-54	686	5prime_fragment	FALSE	canonical	3	95	junction_1	21.1822449235203	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATACTGGATCTCTT	NA	False	NA	NA	False	AAAAAG	-1	NA	42491195	42450980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_46296.known	chr15	-	3191	4	FSM	ENSG00000103994.18	ENST00000565948.1	3191	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	63.5627424063989	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAATAAAAGAAGGAA	3	False	NA	NA	False	NA	NA	NA	42457556	42446625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42446659_42448071_42448706_42449770_42451955_42457216
transcript_46297.nic	chr15	-	1584	2	ISM	ENSG00000103994.18	ENST00000567041.1	719	5	32843	-686	-11	686	3prime_fragment	FALSE	canonical	3	95	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATACTGGATCTCTT	NA	False	NA	NA	False	AAAAAG	-1	NA	42457567	42450980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_42451955_42456957
transcript_46298.known	chr15	-	1598	7	FSM	ENSG00000103978.16	ENST00000307216.10	1598	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	94.9625657240204	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTAGCAGTTTGGTGT	-7	True	NA	NA	False	AGTAAA	-26	NA	42273436	42257934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42258991_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_46304.known	chr15	-	7097	6	FSM	ENSG00000180979.10	ENST00000397130.8	7097	6	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_5	25.3250863769504	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGCAGTATTTGTCTT	-8	True	NA	-11	True	AATAAA	-22	NA	42548793	42537828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548692
transcript_46306.known	chr15	-	1459	5	FSM	ENSG00000180979.10	ENST00000569830.1	1459	5	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_4	27.5352047386614	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTCTGTTGGAATGTG	-8	True	NA	NA	False	NA	NA	NA	42548793	42544042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42548245_42548350_42548457_42548692
transcript_46310.known	chr15	+	2310	8	FSM	ENSG00000092531.10	ENST00000249647.8	2310	8	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_5	38.4697071388247	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTATTGTTCTTTCAA	-18	True	NA	18	True	ATTAAA	-14	NA	42495633	42533058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42528261_42528421_42529674_42529820_42531412
transcript_46311.known	chr15	+	846	7	FSM	ENSG00000092531.10	ENST00000566035.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	252.322544903674	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTTTTTATTGCCAC	26	True	NA	NA	False	AATAAA	-18	NA	42495677	42529820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513173_42513448_42515236_42515355_42528261_42528421_42529674
transcript_46312.known	chr15	-	2407	6	FSM	ENSG00000180979.10	ENST00000563454.5	2407	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	40.4405736853472	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGCTGGAAGCAAGG	13	True	NA	64	True	AATAAA	-14	NA	42548772	42542523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548666
transcript_46313.known	chr15	+	595	2	FSM	ENSG00000092531.10	ENST00000563451.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAACTTACTTTTTTTTTT	-1	True	NA	NA	False	ACTAAA	-10	NA	42495650	42512364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42495714_42511832
transcript_46316.known	chr15	+	626	7	FSM	ENSG00000137814.12	ENST00000564279.5	626	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	65.7917590246343	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGTGACTGAGACAGA	20	True	NA	NA	False	NA	NA	NA	42548857	42566630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_46327.known	chr15	+	3921	6	FSM	ENSG00000137814.12	ENST00000260372.8	3921	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	22.7033037243481	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	0	True	NA	81	True	AATAAA	-21	NA	42548837	42569994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_46334.known	chr15	+	2853	6	FSM	ENSG00000137814.12	ENST00000391623.8	2853	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	72.488343890587	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGTCTTGTGAATTC	0	True	NA	19	True	AATAAA	-19	NA	42548837	42568930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_46342.nic	chr15	+	841	5	ISM	ENSG00000137814.12	ENST00000564279.5	626	7	-63	4943	-33	0	5prime_fragment	TRUE	canonical	3	25	junction_3	58.5720709895083	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	-5	True	NA	6	True	AATAAA	-20	NA	42548794	42561687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269
transcript_46345.known	chr15	+	590	5	FSM	ENSG00000137814.12	ENST00000563479.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	70.1868043153412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATCTTTATAAACATGAT	0	True	NA	-14	True	AAGAAA	-1	NA	42548837	42566733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42558197_42558291_42561269_42561403_42563748_42563858_42566606
transcript_46348.known	chr15	+	1702	5	FSM	ENSG00000137814.12	ENST00000568876.5	1702	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	55.0022726803175	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAT	-10	True	NA	NA	False	AATAAA	-4	NA	42548827	42567858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_46357.nic	chr15	+	750	4	ISM	ENSG00000137814.12	ENST00000260372.8	3921	6	-41	8307	-31	0	5prime_fragment	FALSE	canonical	3	130	junction_2	12.2836838484589	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	-3	True	NA	6	True	AATAAA	-20	NA	42548796	42561687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269
transcript_46360.known	chr15	+	709	4	FSM	ENSG00000137814.12	ENST00000568846.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9.28559218478941	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	-4	True	NA	6	True	AATAAA	-20	NA	42548833	42561687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269
transcript_46363.nnic	chr15	+	742	3	NNC	ENSG00000137814.12	novel	3921	6	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	78.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	445	False	NA	81	True	AATAAA	-21	NA	42548793	42569994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_42548966_42558197_42558291_42569517
transcript_46367.known	chr15	+	861	5	FSM	ENSG00000137814.12	ENST00000570178.1	861	5	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_3	65.8876885313182	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATGTGTGTTTA	29	False	NA	NA	False	AATATA	-37	NA	42548866	42567096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42563748_42563858_42566606
transcript_46368.known	chr15	+	443	2	FSM	ENSG00000137814.12	ENST00000607467.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	NA	False	NA	6	True	AATAAA	-20	NA	42559383	42561687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42559409_42561269
transcript_46374.nic	chr15	+	761	4	ISM	ENSG00000159433.12	ENST00000564158.5	6049	14	-53	37842	0	-2879	5prime_fragment	FALSE	canonical	0	0	junction_1	0.942809041582063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTTTTTCAGCATTT	0	True	NA	NA	False	NA	NA	NA	42575605	42635272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_42575763_42583345_42583416_42585520_42585638_42634855
transcript_46375.known	chr15	+	15637	33	FSM	ENSG00000159433.12	ENST00000290607.12	15637	33	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	5.38371386683951	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGTGAAGAGTAGATGAA	0	True	NA	NA	False	ATTAAA	-19	NA	42575605	42720998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42575763_42583345_42583416_42585520_42585638_42634855_42634973_42637906_42637940_42638025_42638088_42638699_42638813_42651015_42651086_42652519_42652593_42661157_42661226_42662793_42662892_42663280_42663491_42663819_42663918_42665252_42665331_42665785_42665849_42669157_42669338_42674439_42674492_42674826_42674965_42675663_42675747_42675871_42675976_42681421_42681613_42682103_42682576_42684115_42694343_42694527_42694726_42695139_42695324_42695742_42695881_42716676_42716765_42716926_42717049_42717730_42717796_42717976_42718180_42718434_42718515_42718751_42718911_42719472
transcript_4638.known	chr1	+	1193	10	FSM	ENSG00000126088.14	ENST00000246337.9	1193	10	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	58.0372379395705	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	7	True	NA	15	True	AATAAA	-16	NA	45012253	45015575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_46380.known	chr15	-	3332	29	FSM	ENSG00000159459.12	ENST00000546274.6	3332	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	6.61977556805581	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTTTTTAAATTG	-15	True	NA	NA	False	AATAAA	-23	NA	43106113	43015655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43015870_43017094_43017182_43021274_43021376_43022701_43022802_43024828_43024984_43025380_43025430_43026560_43026664_43027775_43027829_43029943_43030069_43032567_43032632_43036177_43036280_43036527_43036594_43037772_43037884_43038170_43038233_43043214_43043396_43047160_43047290_43048391_43048492_43054741_43054900_43056343_43056443_43058340_43058430_43059084_43059193_43059701_43059826_43060051_43060115_43067897_43068037_43070794_43070926_43074978_43075090_43082637_43082717_43085983_43086241_43105941
transcript_4639.known	chr1	+	1335	10	FSM	ENSG00000126088.14	ENST00000651476.1	1335	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	251.518499430073	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	NA	False	NA	15	True	AATAAA	-16	NA	45012161	45015575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_46392.known	chr15	+	1634	12	FSM	ENSG00000166946.14	ENST00000566515.5	1634	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	96.6299920930392	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAATAAAATGCTAACT	36	False	NA	NA	False	AGTAAA	-32	NA	43185327	43195164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194138_43194414_43194462_43194726
transcript_46393.known	chr15	+	1831	11	FSM	ENSG00000166946.14	ENST00000565296.5	1831	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	76.0702964369142	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	18	True	NA	NA	False	AATAAA	-21	NA	43185438	43195195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194462_43194726
transcript_46394.known	chr15	+	3515	11	FSM	ENSG00000166946.14	ENST00000300213.9	3515	11	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_9	22.284748147556	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCAGTTATTCCTT	-18	True	NA	7	True	AATAAA	-20	NA	43185402	43197177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_46396.known	chr15	+	1385	10	FSM	ENSG00000166946.14	ENST00000568507.5	1385	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	76.6710143694763	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	18	True	NA	NA	False	AATAAA	-6	NA	43185438	43195180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_46397.known	chr15	+	1450	10	FSM	ENSG00000166946.14	ENST00000563065.5	1450	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	77.6980543792506	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	-15	True	NA	NA	False	AATAAA	-21	NA	43185405	43195195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_4640.known	chr1	-	3597	21	FSM	ENSG00000126107.15	ENST00000372172.5	3597	21	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_9	18.9300686739378	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTCAGAATGTGTTTAT	-13	True	NA	-7	True	AATAAA	-13	NA	45011324	45002547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45003577_45003668_45003741_45003854_45003937_45004059_45004135_45004247_45004378_45004599_45004807_45005793_45005884_45005996_45006117_45006691_45006796_45006950_45007016_45007218_45007272_45007412_45007596_45008239_45008322_45008535_45008702_45009143_45009227_45009368_45009483_45009567_45009684_45009985_45010122_45010200_45010294_45010545_45010707_45010888
transcript_46407.known	chr15	-	792	1	FSM	ENSG00000205871.5	ENST00000487100.1	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1808	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTCAGACTTCAAATA	26	False	NA	NA	False	NA	NA	NA	43116493	43115701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43115700_43116500
transcript_46408.known	chr15	+	1479	9	FSM	ENSG00000166946.14	ENST00000444658.7	1479	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_7	19.5923294939627	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATGAGTGCCCTTCCA	15	True	NA	NA	False	AATAAA	-18	NA	43185939	43195192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_4641.known	chr1	+	1177	9	FSM	ENSG00000126088.14	ENST00000652287.1	1177	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	276.435684201588	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	-4	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_4642.known	chr1	+	1173	9	FSM	ENSG00000126088.14	ENST00000636836.1	1173	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	286.2313039746	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	-4	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45015336
transcript_46421.known	chr15	+	1559	10	FSM	ENSG00000168803.16	ENST00000389651.8	1559	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	14.6599311133072	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	42	False	NA	3	True	ATTAAA	-16	NA	43330726	43349412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43330860_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
transcript_46422.known	chr15	+	3514	12	FSM	ENSG00000168803.16	ENST00000428046.7	3514	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_9	10.3348883571799	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCTGAGTTCTGTG	-11	True	NA	14	True	AATAAA	-14	NA	43330673	43353898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43348906_43349046_43350940_43351042_43351750
transcript_46425.nic	chr15	-	593	5	ISM	ENSG00000067369.14	ENST00000413546.1	3143	16	-103	48298	-33	16491	5prime_fragment	FALSE	canonical	3	209	junction_1	15.0748134316813	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGAAGAAGATACTTC	NA	False	NA	3	True	NA	NA	NA	43493189	43480946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_43481023_43491668_43491754_43492001_43492096_43492283_43492469_43493036
transcript_46426.nic	chr15	-	1242	4	ISM	ENSG00000067369.14	ENST00000413546.1	3143	16	-235	58427	-165	6362	5prime_fragment	FALSE	canonical	3	219	junction_2	11.5758369027902	113	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGAGTATTATCAGAAC	NA	False	NA	NA	False	NA	NA	NA	43493321	43491075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_43491754_43492001_43492096_43492283_43492469_43493036
transcript_4643.known	chr1	+	1102	9	FSM	ENSG00000126088.14	ENST00000636293.1	1102	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	287.907510105242	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	-4	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
transcript_46432.known	chr15	+	2617	18	FSM	ENSG00000137822.13	ENST00000260383.11	2617	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	13.8128870172338	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTATGGTTCATAT	16	True	NA	NA	False	AATATA	-13	NA	43371100	43405573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398037_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
transcript_46434.known	chr15	+	6812	18	FSM	ENSG00000137822.13	ENST00000564079.6	6812	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_12	7.21206217599723	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	16	True	NA	NA	False	ATTAAA	-21	NA	43371100	43409771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
transcript_4644.known	chr1	+	1142	9	FSM	ENSG00000126088.14	ENST00000652514.1	1142	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	381.47671537723	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	-4	True	NA	15	True	AATAAA	-16	NA	45012934	45015575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45013020_45013135_45013216_45013354_45013427_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_46445.nic	chr15	+	1910	13	ISM	ENSG00000137822.13	ENST00000564079.6	6812	18	-34	11388	-6	0	5prime_fragment	FALSE	canonical	3	61	junction_12	7.49583217528247	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	-18	True	NA	NA	False	NA	NA	NA	43371066	43398383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040
transcript_4645.known	chr1	+	1106	9	FSM	ENSG00000126088.14	ENST00000491773.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	365.638461290658	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTATTGTGTAGTTTT	1	True	NA	10	True	AATAAA	-11	NA	45012247	45015570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
transcript_46451.known	chr15	-	6055	6	FSM	ENSG00000140265.14	ENST00000684362.1	6055	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	37.7783006499763	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGGTGTTTCTTGAAG	-4	True	NA	-13	True	AATAAA	-16	NA	43371043	43358174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43361942_43363914_43364383_43366109_43366809_43368922_43369128_43369595_43370026_43370557
transcript_46452.nic	chr15	+	1231	4	ISM	ENSG00000137822.13	ENST00000260383.11	2617	18	-34	27947	-6	-277	5prime_fragment	TRUE	canonical	3	70	junction_2	5.31245915016974	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAAGA	-18	True	NA	NA	False	NA	NA	NA	43371066	43377626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013
transcript_46453.known	chr15	+	10553	7	FSM	ENSG00000166963.13	ENST00000382031.5	10553	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.1091263510296	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCTTAGGCTTTTTCT	5	True	NA	17	True	AATAAA	-24	NA	43510957	43531620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43511227_43512189_43512292_43520640_43520724_43520971_43521113_43521323_43529509_43529649_43529871_43530068
transcript_46454.known	chr15	+	10266	6	FSM	ENSG00000166963.13	ENST00000300231.6	10266	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.00665927567458	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGTAGTGCTGCTTAG	-23	True	NA	8	True	AATAAA	-15	NA	43517607	43531611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43517701_43520640_43520724_43520971_43521113_43521323_43529509_43529649_43529871_43530068
transcript_46456.known	chr15	+	1779	10	FSM	ENSG00000237289.10	ENST00000300283.10	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	47.0885690304275	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43593053	43599406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43593272_43594044_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_46460.known	chr15	+	1579	9	FSM	ENSG00000237289.10	ENST00000441322.6	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	16.1844833096395	1838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	927	False	NA	20	True	AGTAAA	-20	NA	43594026	43599406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_46463.nic	chr15	+	1456	8	NIC	ENSG00000237289.10	novel	1579	9	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	57.3097562659736	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	851	False	NA	20	True	AGTAAA	-20	NA	43593950	43599406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_43594368_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_4647.nnic	chr1	-	740	3	NNC	ENSG00000162415.7	novel	390	3	NA	NA	2123	-208275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGGGGGTCTCTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	45304086	45296349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_45296743_45297751_45297939_45303926
transcript_46470.known	chr15	+	1779	10	FSM	ENSG00000223572.10	ENST00000434505.5	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	46.2649375277266	1795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	17	True	AGTAAA	-20	NA	43692885	43699222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43693104_43693876_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_46471.known	chr15	+	1579	9	FSM	ENSG00000223572.10	ENST00000413453.7	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	7.46659226153404	1810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	959	False	NA	17	True	AGTAAA	-20	NA	43693858	43699222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_46473.nic	chr15	+	1688	9	NIC	ENSG00000223572.10	novel	1579	9	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	55.4254848873693	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	943	False	NA	17	True	AGTAAA	-20	NA	43693842	43699222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_43694200_43694710_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_4648.known	chr1	+	1816	1	FSM	ENSG00000186603.7	ENST00000334815.6	1816	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	195	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATCTTCTCCTGTGCTTC	-2	True	NA	44	True	AATAAA	-36	NA	45326894	45328710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45326900_45328700
transcript_46484.known	chr15	+	3680	13	FSM	ENSG00000167004.14	ENST00000300289.10	3680	13	0	0	0	0	multi-exon	TRUE	canonical	3	7091	junction_4	378.359910960744	1709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTCCCAGACCTTGT	9	True	NA	8	True	AGTAAA	-19	NA	43746437	43773278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43746707_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
transcript_46488.known	chr15	-	1755	11	FSM	ENSG00000128886.12	ENST00000319359.8	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	8.21279489577087	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTCTGTGTCCTT	18	True	NA	-31	True	ATTAAA	-2	NA	43776966	43772619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305_43775382_43775524_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
transcript_4649.known	chr1	-	2768	21	FSM	ENSG00000288208.1	ENST00000671898.1	2768	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	102.063705596064	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTTATTTTTGTAGTTA	7	True	NA	-24	True	NA	NA	NA	45491155	45329261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45329888_45330069_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333604_45334390_45334512_45355302_45355450_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_46497.known	chr15	+	1931	5	FSM	ENSG00000140264.21	ENST00000381359.5	1931	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4784.54466877466	27607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCGTGTGCCCAGGGCT	7	True	NA	51	True	NA	NA	NA	43777099	43794595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43777503_43785409_43785535_43791975_43792384_43792974_43793084_43793709
transcript_46504.known	chr15	-	603	4	FSM	ENSG00000205771.7	ENST00000692045.1	925	4	36	286	12	-69	multi-exon	FALSE	canonical	1	1	junction_1	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTGCCTAGGTGAAT	-4	True	NA	NA	False	NA	NA	NA	43746285	43736797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43737009_43744394_43744569_43745021_43745168_43746213
transcript_46505.known	chr15	-	1653	4	FSM	ENSG00000205771.7	ENST00000381680.7	1657	4	4	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.86744175568088	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCCGGGCTTGGTGGT	-21	False	NA	NA	False	ACTAAA	-23	NA	43746302	43735933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43737009_43744394_43744569_43745021_43745171_43746047
transcript_4651.known	chr1	-	3071	11	FSM	ENSG00000070759.17	ENST00000372086.4	3071	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	4.77493455452533	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	-1	True	NA	-1	True	AATAAA	-17	NA	45491163	45343882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_46516.known	chr15	+	690	3	FSM	ENSG00000140264.21	ENST00000403425.5	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	5328.5	8174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	32	False	NA	28	True	ATTAAA	-17	NA	43792367	43794046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792612_43792974_43793084_43793709
transcript_46519.known	chr15	+	586	3	FSM	ENSG00000140264.21	ENST00000402131.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	5333.5	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	32	False	NA	-1	True	NA	NA	NA	43792367	43793975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792579_43792974_43793084_43793709
transcript_46521.known	chr15	+	2927	3	FSM	ENSG00000242028.8	ENST00000497142.2	2927	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	1583.5	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	21	False	NA	NA	False	AATAAA	-18	NA	43800626	43804427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43800785_43801517_43801570_43801710
transcript_46523.known	chr15	-	1466	3	FSM	ENSG00000205771.7	ENST00000429276.1	1466	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAGGAAGTGGGTAG	NA	False	NA	NA	False	AAAAAG	-6	NA	43747094	43743812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43744569_43745021_43745168_43746530
transcript_46526.known	chr15	+	548	2	FSM	ENSG00000140264.21	ENST00000474290.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCCTGGCTAATGTTTT	-6	True	NA	NA	False	NA	NA	NA	43777086	43778116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43777503_43777984
transcript_46527.known	chr15	+	3096	2	FSM	ENSG00000242028.8	ENST00000458412.2	3096	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGCTAGTACCTGAGCT	-7	True	NA	NA	False	AATAAA	-18	NA	43800598	43804427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43800785_43801517
transcript_46529.known	chr15	+	582	2	FSM	ENSG00000140264.21	ENST00000409614.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	10706	junction_1	0	7984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	503	False	NA	28	True	ATTAAA	-17	NA	43792838	43794046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43793084_43793709
transcript_4653.known	chr1	-	3019	10	FSM	ENSG00000070759.17	ENST00000486676.5	3019	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	15.3043203776653	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCAGCCTTCTTACTT	1	True	NA	-2	True	AATAAA	-16	NA	45491161	45343883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45421724_45421847_45457563_45457872_45490851
transcript_46530.known	chr15	+	506	3	FSM	ENSG00000140264.21	ENST00000339624.9	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_2	3881.5	29945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	11	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792384_43792974_43793084_43793686
transcript_46531.known	chr15	+	2543	3	FSM	ENSG00000140264.21	ENST00000249786.9	2543	3	0	0	0	0	multi-exon	FALSE	canonical	3	8075	junction_1	1315.5	25481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGTAGGATGTGTGT	-16	True	NA	27	True	AATAAA	-36	NA	43792319	43796079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792384_43792974_43793084_43793709
transcript_46532.known	chr15	+	1030	2	FSM	ENSG00000140264.21	ENST00000486144.1	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	8075	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCACTCCCGGGGGT	-6	True	NA	-26	True	NA	NA	NA	43792329	43793950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792384_43792974
transcript_46534.known	chr15	-	2043	9	FSM	ENSG00000140259.7	ENST00000267812.4	2043	9	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_3	18.0329559418305	996	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTTCACATTTTGA	18	True	NA	-3	True	ATTAAA	-25	NA	43824690	43804491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43805277_43805375_43805466_43809754_43809915_43812986_43813148_43813248_43813358_43814500_43814689_43814944_43815075_43817228_43817449_43824490
transcript_4654.nnic	chr1	-	2927	10	NIC	ENSG00000070759.17	novel	3071	11	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_6	13.9452191019887	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCAGCCTTCTTACTT	-5	True	NA	-2	True	AATAAA	-16	NA	45491167	45343883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_46545.known	chr15	+	3932	13	FSM	ENSG00000092470.12	ENST00000263795.11	3932	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_10	10.295630140987	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCTCACTTTTGTGG	7	True	NA	27	True	AATAAA	-16	NA	43827001	43868412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43827093_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_46546.known	chr15	+	2586	13	FSM	ENSG00000092470.12	ENST00000381246.6	2586	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	38.4587621861246	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATTCTATAGTA	-15	True	NA	30	True	ATTAAA	-20	NA	43826979	43867018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43827119_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_4655.nic	chr1	-	2094	4	ISM	ENSG00000070759.17	ENST00000372086.4	3071	11	-4	40730	-4	14120	5prime_fragment	FALSE	canonical	3	47	junction_2	4.02768199119819	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-5	True	NA	NA	False	NA	NA	NA	45491167	45384612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_45385961_45421724_45421847_45457563_45457872_45490851
transcript_46550.nic	chr15	+	680	4	ISM	ENSG00000092470.12	ENST00000263795.11	3932	13	-42	32197	-20	-6456	5prime_fragment	FALSE	canonical	3	137	junction_2	10.8730042868667	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAATATCTAGTTTGCA	NA	False	NA	NA	False	NA	NA	NA	43826959	43836215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_43827093_43827964_43828367_43835060_43835151_43836160
transcript_46551.known	chr15	+	813	7	FSM	ENSG00000092470.12	ENST00000452115.1	813	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	49.5838235269887	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGAAATTCCTTGTG	-7	True	NA	NA	False	ATTAAA	-3	NA	43826987	43842671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43827093_43828074_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627
transcript_46554.nnic	chr15	-	396	2	Genic_Genomic	ENSG00000227973.1	novel	396	1	NA	NA	-32	44	multi-exon	FALSE	canonical	0	0	junction_1	0	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGCCCAGGACACCAAAG	3624	False	NA	NA	False	AATAAA	-44	NA	43876276	43875804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr15_-_43876123_43876198
transcript_46555.known	chr15	-	396	1	FSM	ENSG00000227973.1	ENST00000451079.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	387	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCATATGAAAGACTGAAA	3656	False	NA	NA	False	AAGAAA	-5	NA	43876244	43875848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43875800_43876200
transcript_46556.known	chr15	+	3974	10	FSM	ENSG00000166734.20	ENST00000299957.11	3974	10	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_9	37.2273628291056	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTTTTGCTGATTCT	-7	True	NA	11	True	AATAAA	-18	NA	44288718	44415758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44402886_44403055_44413335
transcript_46557.known	chr15	+	3764	9	FSM	ENSG00000166734.20	ENST00000345795.6	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	54.5067369689289	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGTTTTGCTGATTC	-6	True	NA	10	True	AATAAA	-17	NA	44288759	44415757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44413335
transcript_46561.known	chr15	+	6433	13	FSM	ENSG00000137770.14	ENST00000260327.9	6433	13	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_11	29.48964036554	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTTGATGATATTTT	7	True	NA	15	True	AATAAA	-16	NA	44427628	44529038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
transcript_46571.nic	chr15	+	589	4	ISM	ENSG00000137770.14	ENST00000260327.9	6433	13	-68	42460	-61	0	5prime_fragment	FALSE	canonical	3	430	junction_3	30.3461511379761	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATGTAAAACAAAATGGAA	316	False	NA	NA	False	NA	NA	NA	44427560	44486578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550
transcript_46575.nic	chr15	+	269	2	ISM	ENSG00000137770.14	ENST00000560834.1	571	4	-43	25262	-23	-25229	5prime_fragment	FALSE	canonical	3	450	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAATATTCAGAGGTTG	-23	True	NA	NA	False	NA	NA	NA	44427598	44459085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_44427773_44458990
transcript_46576.nic	chr15	+	372	2	ISM	ENSG00000137770.14	ENST00000560834.1	571	4	-32	25148	-12	-25115	5prime_fragment	FALSE	canonical	3	450	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATGATTTTACCATATA	-12	True	NA	3	True	ATTAAA	-27	NA	44427609	44459199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_44427773_44458990
transcript_46579.known	chr15	-	1408	3	FSM	ENSG00000179523.6	ENST00000560049.2	1408	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	20.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATTGATTCTGTTTC	NA	False	NA	-6	True	AATAAA	-19	NA	44536922	44534504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44535475_44536042_44536359_44536800
transcript_46580.known	chr15	-	1288	3	FSM	ENSG00000179523.6	ENST00000653319.1	1288	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	33	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTCTTTCTGCATATA	NA	False	NA	-28	True	NA	NA	NA	44537046	44534526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44535475_44536042_44536359_44537022
transcript_46587.known	chr15	-	500	2	FSM	ENSG00000179523.6	ENST00000559356.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAGTCAGGAAAAGG	-12	True	NA	NA	False	NA	NA	NA	44536894	44535068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44535475_44536800
transcript_46592.known	chr15	-	570	2	FSM	ENSG00000179523.6	ENST00000558323.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGATTGGAAGGAGGCA	939	False	NA	NA	False	NA	NA	NA	44535943	44535088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44535475_44535759
transcript_46593.known	chr15	-	1093	3	FSM	ENSG00000179523.6	ENST00000560750.1	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	31.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAAAACAATGTACACA	242	False	NA	NA	False	AAAACA	-20	NA	44536640	44527256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44527540_44535262_44535475_44536042
transcript_46599.known	chr15	-	6426	32	FSM	ENSG00000104133.16	ENST00000558319.5	6426	32	0	0	0	0	multi-exon	TRUE	canonical	2	32	junction_18	12.513135658013	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTTGCTTTTTATTGT	-10	True	NA	NA	False	AATACA	-36	NA	44663678	44573356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
transcript_46604.known	chr15	+	2479	8	FSM	ENSG00000104131.13	ENST00000261868.10	2479	8	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_6	87.3248684686168	2450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGGTACAGGTATTCT	-15	True	NA	21	True	ATTAAA	-18	NA	44537146	44562803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_46605.known	chr15	+	1550	6	FSM	ENSG00000104131.13	ENST00000424492.7	1550	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	230.825821779107	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTAAATTGTTATGTT	15	True	NA	38	True	TATAAA	-33	NA	44537124	44561999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44537238_44537323_44537428_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_46608.known	chr15	+	3190	2	FSM	ENSG00000185880.13	ENST00000560141.2	3190	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATGGATGTTGTGAG	1	True	NA	2	True	AATAAA	-12	NA	44729000	44734000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44729553_44731362
transcript_46612.known	chr15	+	817	2	FSM	ENSG00000140263.15	ENST00000674211.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTTAGTCCTCTTGTA	-45	True	NA	NA	False	NA	NA	NA	45023146	45036363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45023350_45035749
transcript_46614.known	chr15	+	4818	9	FSM	ENSG00000140263.15	ENST00000267814.14	4818	9	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_7	28.1247222208505	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTCCTGACTCAT	3	True	NA	NA	False	AATAAA	-27	NA	45023194	45077185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45023350_45040407_45040442_45043256_45043422_45061066_45061227_45065270_45065390_45068180_45068247_45068876_45069053_45072316_45072439_45073364
transcript_46615.known	chr15	-	595	2	FSM	ENSG00000259539.1	ENST00000558039.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACACCCTGGCCCAG	3	True	NA	NA	False	NA	NA	NA	45167526	45152663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_45153218_45167485
transcript_46621.known	chr15	-	2470	4	FSM	ENSG00000259520.6	ENST00000560344.6	2470	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATGACTGCTAGGAAT	-4	True	NA	NA	False	AATAAA	-25	NA	45279229	45251582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_45253935_45255329_45255368_45255951_45255999_45279196
transcript_46623.known	chr15	-	736	4	FSM	ENSG00000259520.6	ENST00000559003.5	736	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACTGCTAGGAATTAT	NA	False	NA	NA	False	AATAAA	-28	NA	45256002	45251579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_45252073_45253780_45253935_45255329_45255368_45255951
transcript_46624.known	chr15	+	4371	18	FSM	ENSG00000137860.12	ENST00000347644.8	4371	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1.23389276255312	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTACTTGGCTGAGGC	-7	True	NA	8	True	AATAAA	-18	NA	45252233	45277846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45252279_45253199_45253297_45253431_45253521_45262014_45262107_45263060_45263245_45263880_45264023_45264654_45264769_45265088_45265167_45265582_45265664_45266080_45266162_45267454_45267581_45267665_45267797_45268209_45268379_45269337_45269536_45270194_45270277_45272294_45272394_45272672_45272785_45275395
transcript_46625.known	chr15	-	2348	9	FSM	ENSG00000171766.17	ENST00000396659.8	2348	9	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_7	18.6949190958399	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATTGGTCTAGTCAT	0	True	NA	-5	True	AATAAA	-21	NA	45378544	45361123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_45362222_45363899_45364017_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600_45376820_45378384
transcript_46626.known	chr15	+	2561	8	FSM	ENSG00000171763.20	ENST00000305560.11	2561	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	10.8062717994728	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTGTGTGTGTTGAT	-11	True	NA	NA	False	AATAAA	-18	NA	45402335	45421415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45403519_45405319_45405506_45410371_45410531_45414570_45414781_45415586_45415780_45417268_45417400_45418556_45418683_45421042
transcript_46627.known	chr15	+	494	5	FSM	ENSG00000104164.12	ENST00000562384.5	494	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.3257571153372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTCTTCTCCTGTCC	3	True	NA	NA	False	NA	NA	NA	45587351	45606527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587526_45597879_45597892_45603099_45603188_45605427_45605515_45606394
transcript_46628.known	chr15	+	3838	5	FSM	ENSG00000104164.12	ENST00000565323.6	3838	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	48.5669640805352	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGATGTCATTTATCA	0	True	NA	12	True	AATAAA	-15	NA	45587589	45609708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587797_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_46630.known	chr15	+	616	5	FSM	ENSG00000104164.12	ENST00000565409.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	46.4724380681711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTATGTCATATGTTGA	-10	True	NA	NA	False	NA	NA	NA	45587784	45606601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587877_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_46632.known	chr15	+	480	4	FSM	ENSG00000104164.12	ENST00000568963.5	480	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.9142503040554	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTCTCCTGTCCCA	3	True	NA	NA	False	NA	NA	NA	45587351	45606529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587526_45603103_45603188_45605427_45605515_45606394
transcript_46634.known	chr15	+	4013	6	FSM	ENSG00000104164.12	ENST00000568816.5	4013	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	59.5939594254317	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGATGTCATTTATCAAG	1	True	NA	14	True	AATAAA	-17	NA	45587590	45609710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587797_45592134_45592277_45601233_45601408_45603099_45603188_45605427_45605515_45606394
transcript_46635.known	chr15	+	1051	3	FSM	ENSG00000104164.12	ENST00000567740.5	1051	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	64.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGATACTCTTTATTA	NA	False	NA	NA	False	NA	NA	NA	45587213	45607046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587526_45605427_45605515_45606394
transcript_46638.known	chr15	+	1839	5	FSM	ENSG00000104164.12	ENST00000567523.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	44.2627100390385	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAATT	2	True	NA	NA	False	NA	NA	NA	45587378	45607773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587526_45592134_45592277_45603103_45603188_45605427_45605515_45606394
transcript_46639.known	chr15	+	1701	10	FSM	ENSG00000137767.14	ENST00000260324.12	1701	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.415739709641549	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTTCTATGAGAAAATT	-21	True	NA	28	True	AATAAA	-44	NA	45635028	45691281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45635109_45658906_45659158_45661954_45662126_45669927_45669982_45673606_45673802_45676100_45676311_45682477_45682662_45688336_45688405_45689038_45689218_45690972
transcript_46642.known	chr15	+	5907	19	FSM	ENSG00000137872.17	ENST00000536845.7	5907	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	8.08290376865476	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTTGATATTGAAGAGGT	4	True	NA	17	True	AATAAA	-23	NA	47717504	47774228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_47717693_47759744_47759908_47760303_47760416_47760977_47761039_47761157_47761221_47761329_47761432_47761660_47761752_47762199_47762320_47763015_47763105_47763849_47764068_47764173_47764306_47764637_47764794_47764882_47765057_47765868_47766010_47766104_47766183_47766615_47766678_47767036_47767094_47768580_47768749_47770496
transcript_46643.known	chr15	-	792	1	FSM	ENSG00000213862.4	ENST00000497325.1	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	258	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTACACTGTTGAGTT	24	False	NA	NA	False	ACTAAA	-7	NA	47730935	47730143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_47730100_47730900
transcript_46647.nic	chr15	+	1729	3	ISM	ENSG00000074803.21	ENST00000560692.5	8632	22	74618	0	66219	0	3prime_fragment	FALSE	canonical	3	33	junction_1	0	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGGCCTAGGTCATG	NA	False	NA	12	True	AATAAA	-16	NA	48298943	48304078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_48299276_48301314_48301383_48302749
transcript_46650.nnic	chr15	+	780	3	NIC	ENSG00000233932.6	novel	2634	2	NA	NA	-56	-2024	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTCACCATGCTGTGTA	NA	False	NA	NA	False	AATAAA	-14	NA	48178410	48201673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_48178647_48191739_48191854_48201243
transcript_46652.known	chr15	+	2634	2	FSM	ENSG00000233932.6	ENST00000645050.1	2634	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAACTCTACCATAATA	NA	False	NA	NA	False	NA	NA	NA	48178466	48203697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48178647_48201243
transcript_46653.known	chr15	-	731	4	FSM	ENSG00000104177.19	ENST00000560172.5	731	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	75.6497778508892	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGCTTATTTGTTGCTT	2908	False	NA	NA	False	ATTAAA	-18	NA	48149326	48141797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48142137_48142895_48143072_48149031_48149084_48149162
transcript_46654.known	chr15	-	1742	6	FSM	ENSG00000104177.19	ENST00000620867.4	1742	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	26.3469163281019	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTATATAGCTTATT	NA	False	NA	NA	False	ATTAAA	-10	NA	48152280	48141805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48143072_48149031_48149084_48149162_48149372_48151472_48151572_48151873_48151943_48152233
transcript_46657.known	chr15	-	5560	27	FSM	ENSG00000103995.14	ENST00000380950.7	5560	27	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	13.1944941000484	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTATGAATTATTTT	2	True	NA	-1	True	AATAAA	-18	NA	48811069	48737937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_46660.known	chr15	-	1947	13	FSM	ENSG00000103995.14	ENST00000560322.5	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.49853789918334	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGATGAAAAAAGCATTG	NA	False	NA	NA	False	AAGAAA	-24	NA	48811146	48772514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_46663.known	chr15	-	253	2	FSM	ENSG00000103995.14	ENST00000559630.1	253	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAACAAGTTTTATTTC	-5	True	NA	NA	False	AAAAAG	-16	NA	48811076	48805519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48805657_48810960
transcript_46665.nnic	chr15	+	1107	2	NNC	ENSG00000255302.5	novel	584	2	NA	NA	-29	-368	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_1	0	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTGGCTAATAGTAT	-22	True	NA	17	True	AATAAA	-18	NA	48878104	48879805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_48878273_48878866
transcript_46666.known	chr15	+	2040	1	FSM	ENSG00000255302.5	ENST00000530028.3	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAATTCAGAGCCTTA	7	True	NA	3	True	AGTAAA	-20	NA	48878133	48880173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48878100_48880200
transcript_46667.known	chr15	+	584	2	FSM	ENSG00000255302.5	ENST00000560490.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCGCTATCTTTTGGG	9	True	NA	NA	False	NA	NA	NA	48878135	48878785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48878273_48878338
transcript_4667.known	chr1	-	1708	16	FSM	ENSG00000132781.20	ENST00000456914.7	1708	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	64.4780755158079	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	0	True	NA	-4	True	AGTAAA	-20	NA	45339970	45329241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
transcript_46670.nic	chr15	-	2147	12	ISM	ENSG00000138593.9	ENST00000559471.6	7059	18	-320	24061	-319	-1152	5prime_fragment	FALSE	canonical	1	4	junction_3	3.2878438763682	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAGAGAAGGAAATTGC	-1	True	NA	NA	False	NA	NA	NA	49046766	49012698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_46679.known	chr15	-	7059	18	FSM	ENSG00000138593.9	ENST00000559471.6	7059	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	2.81862318840257	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCCTTTCAGAAGAGAT	19	True	NA	-16	True	AATAAA	-19	NA	49046446	48988637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876_49001098_49009215_49009379_49011730_49011864_49012647_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_4668.known	chr1	-	1662	16	FSM	ENSG00000132781.20	ENST00000528013.6	1662	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	81.5024471343584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAAGCCCCCATT	472	False	NA	-68	True	NA	NA	NA	45339946	45329305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333604_45334390_45334512_45339898
transcript_46680.known	chr15	-	6779	17	FSM	ENSG00000138593.9	ENST00000261847.7	6779	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	3.39116499156263	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATTTTCATCTTTTGC	32	True	NA	0	True	AATAAA	-33	NA	49046433	48988769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876_49001098_49009215_49009379_49011730_49011864_49012647_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_46687.nic	chr15	+	2091	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	27.7064974329127	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	NA	False	NA	11	True	ATTAAA	-22	NA	49155726	49328514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49156017_49161739_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_46688.nic	chr15	+	2015	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	28.6949472904203	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	-16	True	NA	11	True	ATTAAA	-22	NA	49155778	49328514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49156017_49161763_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_46694.known	chr15	+	5299	10	FSM	ENSG00000156958.15	ENST00000327171.7	5299	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	19.715256986017	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	-30	True	NA	6	True	AATAAA	-18	NA	49155764	49331882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_46699.known	chr15	+	5176	10	FSM	ENSG00000156958.15	ENST00000560031.6	5176	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.6599311133072	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	-18	True	NA	6	True	AATAAA	-18	NA	49170246	49331882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_46701.nic	chr15	+	1874	9	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_5	31.4977677780506	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	NA	False	NA	11	True	ATTAAA	-22	NA	49155722	49328514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_46708.nnic	chr15	+	1610	8	NIC	ENSG00000156958.15	novel	1834	10	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	31.4363626706269	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACTGAATTGTATGCA	NA	False	NA	11	True	ATTAAA	-22	NA	49170192	49328514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49292326_49292538_49319603_49319806_49327951
transcript_46712.known	chr15	-	6576	13	FSM	ENSG00000166200.15	ENST00000388901.10	6576	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.875257746861	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTAAGTATTTACTGTG	0	True	NA	NA	False	AATAAA	-15	NA	49155599	49122726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_46713.known	chr15	-	2036	13	FSM	ENSG00000166200.15	ENST00000299259.10	2036	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	120.91258895031	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTTTGGTTCTTGATG	NA	False	NA	-6	True	AATAAA	-17	NA	49155661	49127349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137459_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_46714.known	chr15	-	803	8	FSM	ENSG00000166200.15	ENST00000558843.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.06186738388	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATGAATCTGGAAGTC	9	True	NA	NA	False	NA	NA	NA	49155590	49134032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_46723.nic	chr15	-	1574	8	NIC	ENSG00000166262.16	novel	911	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.15515416349971	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	4735	False	NA	-12	True	ATTAAA	-16	NA	49620916	49576135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49576846_49577171_49577306_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620699
transcript_46724.known	chr15	-	1139	8	FSM	ENSG00000166262.16	ENST00000558594.5	1139	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.22616851161035	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTTTTTTCCTTCTTGT	-7	True	NA	NA	False	NA	NA	NA	49620818	49576493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49576846_49577171_49577306_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620133_49620191_49620699
transcript_46727.known	chr15	-	792	8	FSM	ENSG00000166262.16	ENST00000559905.5	792	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	4.89481191400338	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAAATATTTCATTTT	4904	False	NA	NA	False	TTTAAA	-17	NA	49620747	49576740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620133_49620191_49620630
transcript_46739.nic	chr15	-	1476	7	NIC	ENSG00000166262.16	novel	1139	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3.35410196624968	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	0	True	NA	-12	True	ATTAAA	-16	NA	49620854	49576135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49576846_49577171_49577306_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620699
transcript_46741.nic	chr15	-	1498	7	ISM	ENSG00000166262.16	ENST00000561064.5	1596	11	24	153736	-8	0	5prime_fragment	FALSE	canonical	2	3	junction_4	4.20317340430616	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	4746	False	NA	-12	True	ATTAAA	-16	NA	49620905	49576135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620630
transcript_46742.nic	chr15	-	1379	7	ISM	ENSG00000166262.16	ENST00000299338.11	3316	16	-37	249166	-33	0	5prime_fragment	FALSE	canonical	2	3	junction_4	4.3365372770859	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-1	True	NA	-12	True	ATTAAA	-16	NA	49620855	49576135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620699
transcript_46747.nic	chr15	-	1199	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	-41	0	intron_retention	FALSE	canonical	0	0	junction_3	10.8148046676766	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	NA	False	NA	-1	True	AATAAA	-23	NA	49396483	49328392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367609_49371301_49371400_49395974
transcript_46750.nic	chr15	-	1957	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	-7	-439	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	3.89871773792359	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTTTTTACTTTTTTA	-18	True	NA	NA	False	AATAAA	-17	NA	49620829	49575299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49576846_49577628_49577665_49588015_49588084_49611214_49611269_49615120_49615244_49620699
transcript_46753.nic	chr15	-	1147	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	3.89871773792359	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-1	True	NA	-12	True	ATTAAA	-16	NA	49620855	49576135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49576846_49577628_49577665_49588015_49588084_49611214_49611269_49615120_49615244_49620699
transcript_46755.nnic	chr15	-	805	6	NNC	ENSG00000166262.16	novel	569	2	NA	NA	0	-311	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.61109401705356	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTGGTTTTGAACTCT	-5	True	NA	NA	False	AATAAA	-13	NA	49620816	49590086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_49590478_49606155_49606219_49611214_49611269_49615120_49615244_49620133_49620191_49620699
transcript_46758.nnic	chr15	-	759	5	NNC	ENSG00000166262.16	novel	2204	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.6183802907977	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	NA	False	NA	-1	True	AATAAA	-23	NA	49396451	49328392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974_49396098_49396266
transcript_46765.nic	chr15	-	960	4	ISM	ENSG00000166262.16	ENST00000559573.3	2204	5	-41	1431	-41	0	intron_retention	FALSE	canonical	3	18	junction_2	3.77123616632825	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	NA	False	NA	-1	True	AATAAA	-23	NA	49396483	49328392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974
transcript_46775.known	chr15	-	2204	5	FSM	ENSG00000166262.16	ENST00000559573.3	2204	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.6183802907977	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTCTCTTTTTTTCA	NA	False	NA	2	True	ATTAAA	-23	NA	49396442	49326961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974_49396098_49396243
transcript_46785.known	chr15	+	13776	6	FSM	ENSG00000104047.15	ENST00000251250.7	13776	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	158.108064310458	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	47	False	NA	NA	False	AATAAA	-20	NA	49621098	49656232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49623670_49623799_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_468.known	SIRV6	+	574	8	FSM	SIRV6A	SIRV602	574	8	0	0	0	0	multi-exon	FALSE	canonical	3	9392	junction_3	6562.61896762914	7369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
transcript_46804.known	chr15	+	794	5	FSM	ENSG00000104047.15	ENST00000559223.5	794	5	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_2	169.853429461992	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATATTTATAGATAGCAC	-7	True	NA	NA	False	NA	NA	NA	49621044	49634730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535
transcript_46805.known	chr15	+	13699	5	FSM	ENSG00000104047.15	ENST00000403028.8	13699	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	36.4717356318561	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	-4	True	NA	NA	False	AATAAA	-20	NA	49621047	49656232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_46812.known	chr15	+	1131	5	FSM	ENSG00000104047.15	ENST00000558653.5	1131	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	137.932954728013	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACATTAATAAACTTAT	13	True	NA	-16	True	NA	NA	NA	49621064	49643610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621194_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_46818.known	chr15	+	552	4	FSM	ENSG00000104047.15	ENST00000560632.5	552	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	189.221210932249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAGGATTCAAAATAA	30	True	NA	NA	False	AATAAA	-20	NA	49621081	49634595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49625112_49625432_49632170_49632303_49634535
transcript_46826.known	chr15	-	5688	28	FSM	ENSG00000104043.15	ENST00000284509.11	5688	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.388447721544501	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTTTTATCTCTTCT	-6	True	NA	NA	False	AGTAAA	-20	NA	50119233	49858237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49860476_49862244_49862376_49866345_49866485_49876277_49876524_49879375_49879460_49897291_49897516_49898067_49898252_49901091_49901240_49916933_49917040_49918838_49918951_49920245_49920411_49923378_49923495_49931118_49931308_49934016_49934183_49961976_49962021_49972581_49972791_49979616_49979814_49981205_49981295_49987390_49987550_49996676_49996760_50002152_50002224_50010844_50010918_50038767_50038830_50044593_50044693_50047350_50047465_50074126_50074186_50106938_50107009_50119122
transcript_46827.known	chr15	+	2384	10	FSM	ENSG00000140284.11	ENST00000267842.10	2384	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	6.8168274000791	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCACTGTCTCTGTGTT	-2	True	NA	10	True	ATTAAA	-18	NA	50182195	50236385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50182906_50197499_50197710_50202486_50202646_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
transcript_46828.known	chr15	-	2405	12	FSM	ENSG00000140287.11	ENST00000267845.8	2405	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.77138921583987	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACCCTGTGTCACTTAAT	5	True	NA	NA	False	AATAAA	-24	NA	50265726	50241946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50243007_50243142_50243245_50248244_50248344_50252429_50252521_50252611_50252775_50253599_50253667_50254129_50254274_50254529_50254665_50257424_50257548_50258403_50258518_50263234_50263408_50265592
transcript_46832.known	chr15	-	2726	9	FSM	ENSG00000104064.18	ENST00000220429.12	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	56.6545176927666	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	6	True	NA	-16	True	ATTAAA	-10	NA	50355153	50277262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_46833.known	chr15	-	4609	9	FSM	ENSG00000104064.18	ENST00000380877.8	4609	9	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	43.1637507058875	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGTCCAAAACGTGA	-8	True	NA	NA	False	AATAAA	-17	NA	50355198	50275388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_46835.known	chr15	-	1412	9	FSM	ENSG00000104064.18	ENST00000560825.5	1412	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	99.3164135478119	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATGAATGAATGAGTG	-12	True	NA	-24	True	AATAAA	-6	NA	50355202	50285893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50286184_50289482_50289666_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_46838.known	chr15	-	1392	8	FSM	ENSG00000104064.18	ENST00000429662.6	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	56.8976883429855	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	6	True	NA	-10	True	AATAAA	-20	NA	50355153	50285879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_46839.known	chr15	-	1401	8	FSM	ENSG00000104064.18	ENST00000396464.7	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	39.7199379328286	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-8	True	NA	-10	True	AATAAA	-20	NA	50355198	50285879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_46856.nic	chr15	+	1269	3	NIC	ENSG00000244879.9	novel	2277	3	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	176	False	NA	16	True	ATTAAA	-19	NA	50355448	50371343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_50355546_50356099_50356258_50370329
transcript_46857.nnic	chr15	+	1317	3	NNC	ENSG00000244879.9	novel	1098	2	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	15.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	176	False	NA	16	True	ATTAAA	-19	NA	50355448	50371343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_50355546_50356099_50356308_50370331
transcript_46858.known	chr15	+	2277	3	FSM	ENSG00000244879.9	ENST00000648591.1	2277	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTCATCTCACTTTCAG	-2	True	NA	NA	False	AATATA	-3	NA	50355475	50372158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355766_50356099_50356258_50370329
transcript_46860.nnic	chr15	+	1534	3	NNC	ENSG00000244879.9	novel	2277	3	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	28.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	179	False	NA	16	True	ATTAAA	-19	NA	50355451	50371343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_50355766_50356099_50356308_50370331
transcript_46863.nnic	chr15	+	509	2	NNC	ENSG00000244879.9	novel	3008	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGGAACCATAGGCTGT	-11	True	NA	1	True	ATTAAA	-26	NA	50354952	50356360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_50355201_50356099
transcript_46864.known	chr15	+	16182	2	FSM	ENSG00000244879.9	ENST00000499624.3	16182	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCACTTGTCTTTGTCCT	-11	True	NA	NA	False	CATAAA	-17	NA	50355466	50372202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355546_50356099
transcript_46868.known	chr15	+	1098	2	FSM	ENSG00000244879.9	ENST00000668321.1	1098	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	-18	True	NA	16	True	ATTAAA	-19	NA	50355459	50371343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355546_50370331
transcript_46869.known	chr15	+	709	2	FSM	ENSG00000244879.9	ENST00000560359.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGGCTGTGTTTTCTTTT	55	False	NA	11	True	ATTAAA	-36	NA	50355327	50356370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355766_50356099
transcript_4687.nic	chr1	+	2320	8	NIC	ENSG00000132773.12	novel	1887	8	NA	NA	-207	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_6	30.0326353101667	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	124	False	NA	27	True	NA	NA	NA	45339844	45343973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
transcript_46871.known	chr15	+	554	2	FSM	ENSG00000244879.9	ENST00000561289.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAGAAATTTGCCAAAT	67	False	NA	55	True	NA	NA	NA	50355544	50356414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355784_50356099
transcript_46873.known	chr15	+	1076	1	FSM	ENSG00000244879.9	ENST00000619314.1	1076	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAACTTAATCTAG	-5	True	NA	NA	False	AAGAAA	-43	NA	50354958	50356034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355000_50356000
transcript_46876.known	chr15	+	18865	20	FSM	ENSG00000138592.14	ENST00000307179.9	18865	20	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	54.9065183905595	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTGTCTCATACCTGT	1	True	NA	NA	False	AATAAA	-17	NA	50424404	50514421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_4688.known	chr1	+	1887	8	FSM	ENSG00000132773.12	ENST00000372090.6	1887	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	13.3950950511212	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	5	True	NA	27	True	NA	NA	NA	45340169	45343973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
transcript_46883.known	chr15	+	1917	12	FSM	ENSG00000138592.14	ENST00000559329.5	1917	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	87.2418505985961	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCGGGAAAGGCAGCA	1	True	NA	NA	False	AAGAAA	-3	NA	50424404	50481702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50424655_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_46887.nic	chr15	+	1746	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-53	32641	-28	75	5prime_fragment	FALSE	canonical	3	132	junction_1	48.9893866056721	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAGCTGAAGAAAATGA	NA	False	NA	NA	False	AAAAAG	-12	NA	50424351	50481780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_46895.known	chr15	+	1568	10	FSM	ENSG00000138592.14	ENST00000625664.2	1568	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.6214484191256	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAGAAAAA	23	True	NA	NA	False	AAGAAA	-37	NA	50424426	50481682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50424655_50439008_50439178_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_4690.known	chr1	+	2173	8	FSM	ENSG00000132773.12	ENST00000495703.5	2173	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	37.24053091535	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATATTTGACCAGCT	6	True	NA	18	True	NA	NA	NA	45340220	45343964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45340543_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
transcript_46925.known	chr15	+	652	5	FSM	ENSG00000138592.14	ENST00000560297.5	652	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	117.616697369039	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGTCGAAGAAGCTGAAA	-24	True	NA	NA	False	NA	NA	NA	50424379	50449440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50424515_50432337_50432500_50439008_50439178_50441348_50441494_50449399
transcript_46926.known	chr15	-	10382	39	FSM	ENSG00000092439.16	ENST00000646667.1	10382	39	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_15	21.4800203500422	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGATCAAGTAATTATTT	-6	True	NA	NA	False	AATAAA	-21	NA	50686797	50557157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583160_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
transcript_46931.known	chr15	-	7270	15	FSM	ENSG00000138600.10	ENST00000261854.10	7270	15	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	20.2208469916872	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTGTTTTATTTTG	-19	True	NA	NA	False	AATAAA	-19	NA	50765706	50702265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
transcript_46937.known	chr15	-	953	3	FSM	ENSG00000273674.6	ENST00000655436.2	980	3	27	0	25	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTTGGTACGTCCCTG	2	True	NA	NA	False	AAAAAG	-44	NA	50908572	50881794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50882505_50890855_50891078_50908551
transcript_46938.nnic	chr15	-	344	3	NIC	ENSG00000273674.6	novel	479	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATCTGTGGTATTTTGT	-9	True	NA	NA	False	AATAAA	-19	NA	50908609	50839874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_50840006_50874571_50874727_50908551
transcript_46939.nnic	chr15	-	328	3	NIC	ENSG00000273674.6	novel	2398	5	NA	NA	-6	-12547	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCCACCTAGTCTATGGT	-9	True	NA	NA	False	AATAAA	-12	NA	50908609	50852425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_50852541_50874571_50874727_50908551
transcript_46944.known	chr15	+	6743	21	FSM	ENSG00000081014.11	ENST00000261842.10	6743	21	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_11	11.4568756648573	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGGTCTATGTTC	-22	True	NA	11	True	AATAAA	-17	NA	50908682	51005895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50908929_50912077_50912150_50915447_50915572_50923930_50924005_50925097_50925220_50929008_50929169_50930804_50930972_50934623_50934698_50941441_50941565_50941665_50941776_50948019_50948160_50949825_50949939_50950050_50950170_50958491_50958795_50968262_50968378_50984021_50984146_50993369_50993626_50997325_50997884_50999071_50999263_51001025_51001184_51002501
transcript_46947.nic	chr15	-	841	6	ISM	ENSG00000104093.14	ENST00000449909.7	7465	41	-140	114525	-4	3706	5prime_fragment	FALSE	canonical	3	15	junction_3	5.6	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATGTTCCTTATTTA	-15	True	NA	NA	False	AATAAA	-13	NA	51622775	51563336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_51563448_51564124_51564261_51565087_51565167_51568486_51568559_51576055_51576182_51622458
transcript_46950.known	chr15	+	3160	12	FSM	ENSG00000104112.9	ENST00000220478.8	3160	12	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_6	36.5450022586214	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	6	True	NA	18	True	AATAAA	-16	NA	51681502	51721026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_46958.known	chr15	+	2163	11	FSM	ENSG00000104112.9	ENST00000542355.6	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	156.614846039576	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGGATCCAGGTAAA	-5	True	NA	NA	False	NA	NA	NA	51681491	51720071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51681838_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_46967.nic	chr15	+	1135	7	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	-14	28690	-3	0	5prime_fragment	FALSE	canonical	3	486	junction_6	45.5427149925088	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCACTGTGTGGTTGTG	-8	True	NA	7	True	NA	NA	NA	51681488	51692336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158
transcript_46971.known	chr15	+	896	5	FSM	ENSG00000104112.9	ENST00000558709.1	896	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	257.04316271786	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCACTGTGTGGTTGTG	12	False	NA	7	True	NA	NA	NA	51681531	51692336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51681838_51683078_51683125_51683218_51683435_51689218_51689369_51692158
transcript_46972.nic	chr15	+	657	4	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	-145	37730	-134	-9040	5prime_fragment	TRUE	canonical	3	568	junction_3	19.7033556081755	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGAAAGAAAGACAATCT	NA	False	NA	NA	False	NA	NA	NA	51681357	51683296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218
transcript_46974.known	chr15	-	775	3	FSM	ENSG00000140280.14	ENST00000558126.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTGCTGTTTAAGTGA	10	True	NA	NA	False	NA	NA	NA	51751437	51723243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51723650_51724789_51724992_51751270
transcript_46975.known	chr15	-	1277	3	FSM	ENSG00000140280.14	ENST00000267838.7	1277	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAATGCTGACAGCTT	-14	True	NA	54	True	AATAAA	-19	NA	51737655	51723010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51723650_51724789_51725122_51737349
transcript_46977.nic	chr15	+	966	7	ISM	ENSG00000128872.10	ENST00000249700.9	9150	10	-5	33491	-5	-264	5prime_fragment	FALSE	canonical	2	4	junction_3	3.19722101554181	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAAACTCTATTTACTTT	-8	True	NA	NA	False	AGTAAA	-36	NA	51751591	51782872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51751713_51766372_51766568_51768261_51768419_51773711_51773835_51776931_51777019_51781043_51781175_51782720
transcript_46978.known	chr15	+	9150	10	FSM	ENSG00000128872.10	ENST00000249700.9	9150	10	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	3.08320820566925	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGACTGGTTTTATATG	-3	True	NA	NA	False	AATAAA	-20	NA	51751596	51816363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51751713_51766372_51766568_51768261_51768419_51773711_51773835_51776931_51777019_51781043_51781175_51782720_51782829_51798196_51798341_51806376_51806522_51808419
transcript_4698.known	chr1	-	1888	16	FSM	ENSG00000132781.20	ENST00000372115.7	1888	16	0	0	0	0	multi-exon	FALSE	canonical	2	95	junction_15	48.9750957120045	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	NA	False	NA	-4	True	AGTAAA	-20	NA	45340470	45329241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_46982.known	chr15	+	8232	10	FSM	ENSG00000138594.14	ENST00000308580.12	8232	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_3	24.5633471801251	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTTTTTGAAAAAGC	-17	True	NA	16	True	AATAAA	-22	NA	51829652	51915725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51829837_51862810_51863011_51869216_51869374_51887588_51887712_51889055_51889146_51893814_51893946_51896418_51896527_51900154_51900299_51901891_51902037_51908775
transcript_4699.known	chr1	-	1776	16	FSM	ENSG00000132781.20	ENST00000355498.6	1776	16	0	0	0	0	multi-exon	FALSE	canonical	2	111	junction_15	46.4549483071741	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	5	True	NA	-4	True	AGTAAA	-20	NA	45340115	45329241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_46991.nic	chr15	+	564	3	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-24	46353	1	6389	5prime_fragment	FALSE	canonical	3	320	junction_2	10	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCCCCAGAATTTTAA	-2	True	NA	NA	False	CATAAA	-40	NA	51829628	51869372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51829837_51862810_51863011_51869216
transcript_46992.nic	chr15	+	1677	2	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-24	51446	1	1296	5prime_fragment	FALSE	canonical	3	340	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGGAAAAAGCATAAG	-2	True	NA	NA	False	NA	NA	NA	51829628	51864279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51829837_51862810
transcript_46993.nnic	chr15	-	1268	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5603	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.13634802694357	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACGATGTTAGAAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	51936230	51918962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_51919144_51922715_51922909_51924039_51924179_51925744_51925882_51926777_51926871_51928206_51928294_51929332_51929479_51930528_51930624_51936033
transcript_46994.nnic	chr15	-	1259	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5603	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.18330013267038	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACGATGTTAGAAAATT	NA	False	NA	NA	False	AATAAA	-17	NA	51936230	51918962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_51919144_51922724_51922909_51924039_51924179_51925744_51925882_51926777_51926871_51928206_51928294_51929332_51929479_51930528_51930624_51936033
transcript_46996.nnic	chr15	-	478	3	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5603	-10220	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGTAGAATAAATATTTTT	NA	False	NA	NA	False	ATTAAA	-23	NA	51936230	51929292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_51929479_51930528_51930624_51936033
transcript_47.known	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00108_+_0_1000
transcript_4700.known	chr1	-	1891	16	FSM	ENSG00000132781.20	ENST00000672818.3	1891	16	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_14	66.6261210037024	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-22	True	NA	-4	True	AGTAAA	-20	NA	45340440	45329241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45340218
transcript_47000.known	chr15	+	514	3	FSM	ENSG00000069956.14	ENST00000558100.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCACGGTAATCTGAGT	2	True	NA	NA	False	NA	NA	NA	52019237	52046124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52019377_52042753_52042834_52045829
transcript_47003.known	chr15	+	656	2	FSM	ENSG00000069956.14	ENST00000558841.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGATCTTTCCTTTTGAT	-17	True	NA	NA	False	AAGAAA	-44	NA	52019921	52046374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52020033_52045829
transcript_47009.known	chr15	-	2165	12	FSM	ENSG00000166477.13	ENST00000299601.10	2165	12	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_10	46.3167320675961	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-12	True	NA	-1	True	AATAAA	-16	NA	51971778	51938024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_4701.known	chr1	-	1677	16	FSM	ENSG00000132781.20	ENST00000475516.5	1677	16	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_14	64.5422858803952	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	338	False	NA	-4	True	AGTAAA	-20	NA	45340080	45329241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45339975
transcript_47012.known	chr15	-	1981	10	FSM	ENSG00000166477.13	ENST00000315141.5	1981	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	161.756179876984	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTCTATGTTTAAGAAA	-10	True	NA	-3	True	AATAAA	-14	NA	51971776	51938026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_47017.known	chr15	-	866	1	FSM	ENSG00000274528.1	ENST00000612566.1	866	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	1820	False	NA	2	True	AATAAA	-22	NA	52018032	52017166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52017200_52018000
transcript_47018.known	chr15	-	635	2	FSM	ENSG00000259712.1	ENST00000558607.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGAGTGGCGTGCCCAA	8	True	NA	NA	False	NA	NA	NA	52100523	52056674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52057256_52100469
transcript_47019.known	chr15	+	453	1	FSM	ENSG00000242327.1	ENST00000486386.1	453	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTGTCTATGTACTCA	11	True	NA	NA	False	NA	NA	NA	52095294	52095747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52095300_52095700
transcript_4702.known	chr1	-	740	7	FSM	ENSG00000132781.20	ENST00000488731.6	740	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	117.466898410668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTTGTATTTTTTT	423	False	NA	-5	True	AGTAAA	-19	NA	45339995	45329242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45332762_45332835_45334390_45334512_45339975
transcript_47020.known	chr15	-	1735	11	FSM	ENSG00000069966.19	ENST00000358784.11	1735	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	17.6022725805505	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTCTATTGTCTTTT	372	False	NA	-6	True	NA	NA	NA	52180001	52122205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
transcript_47026.nic	chr15	-	1582	7	ISM	ENSG00000069966.19	ENST00000358784.11	1735	11	18	10431	-10	3052	5prime_fragment	FALSE	canonical	3	204	junction_3	17.3341345968647	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGGGCATGGTGATGT	-47	True	NA	NA	False	NA	NA	NA	52179983	52132636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
transcript_47027.nnic	chr15	-	884	4	NNC	ENSG00000069966.19	novel	918	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	113.989278248244	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	-47	True	NA	NA	False	AATAAA	-18	NA	52179983	52149277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_52149767_52149883_52149926_52153939_52154077_52179767
transcript_47029.known	chr15	+	2554	3	FSM	ENSG00000259577.2	ENST00000654724.1	2554	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTCAGGAGTTCAAGAC	523	False	NA	NA	False	NA	NA	NA	52180027	52206915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52180402_52181049_52181203_52204888
transcript_4703.known	chr1	-	1742	16	FSM	ENSG00000132781.20	ENST00000481571.5	1742	16	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_14	66.2559347446618	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	30	True	NA	-4	True	AGTAAA	-20	NA	45340388	45329241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45340218
transcript_47030.known	chr15	+	2131	3	FSM	ENSG00000259577.2	ENST00000559779.2	2131	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCTAAAAGTAATTTTAAA	494	False	NA	NA	False	NA	NA	NA	52179998	52205963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52180402_52180549_52181203_52204888
transcript_47031.known	chr15	-	918	3	FSM	ENSG00000069966.19	ENST00000560116.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	14.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	36	True	NA	NA	False	AATAAA	-18	NA	52179900	52149277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52149926_52153939_52154077_52179767
transcript_47034.known	chr15	-	11971	40	FSM	ENSG00000197535.16	ENST00000687574.1	12223	40	252	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	16.6853150109646	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTTTTTGTCAGTGTC	19	True	NA	NA	False	AATAAA	-12	NA	52528880	52307285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52313849_52314122_52314204_52317047_52317223_52319059_52319343_52321358_52321510_52323354_52323445_52327851_52328007_52330352_52330500_52336462_52336557_52340195_52340395_52346360_52346462_52348817_52348827_52351253_52351482_52353604_52353659_52353870_52354015_52359967_52360082_52364553_52364703_52367030_52367125_52370168_52370418_52372123_52372364_52375303_52375461_52376346_52376559_52379624_52379734_52379821_52379909_52383090_52383189_52384160_52384323_52387828_52387913_52389237_52389364_52391929_52392071_52396315_52396398_52397200_52397467_52405286_52405394_52407291_52407400_52408058_52408141_52410332_52410477_52416144_52416302_52425829_52425975_52428397_52428570_52433174_52433286_52528779
transcript_47038.known	chr15	-	745	4	FSM	ENSG00000128989.11	ENST00000567669.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	745.590146572946	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACTCTTATTTAA	42	False	52569182	NA	False	TTTAAA	-45	NA	52569167	52551593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569111
transcript_47040.known	chr15	-	718	4	FSM	ENSG00000128989.11	ENST00000564163.5	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	709.843331697605	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGAGCAACATAAGTAAA	-16	True	NA	NA	False	NA	NA	NA	52569015	52551734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52552105_52557099_52557223_52564189_52564247_52568847
transcript_47042.known	chr15	-	275	3	FSM	ENSG00000128989.11	ENST00000567830.1	275	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	773.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCACATTCCCACTCC	42	False	52569182	NA	False	NA	NA	NA	52569167	52552008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52552105_52557099_52557223_52569111
transcript_47053.known	chr15	-	959	3	FSM	ENSG00000259203.3	ENST00000654059.2	1337	3	376	2	279	-2	multi-exon	FALSE	canonical	3	16	junction_1	8.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTCCAGAATCCA	351	False	NA	-14	True	AATAAA	-16	NA	52804613	52800167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52800918_52804208_52804298_52804493
transcript_47054.known	chr15	-	2130	3	FSM	ENSG00000259203.3	ENST00000660503.2	2211	3	0	81	0	-77	multi-exon	TRUE	canonical	2	6	junction_1	13.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTCATCAGTCAGAG	NA	False	NA	-81	True	NA	NA	NA	52805251	52802564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52803848_52804208_52804298_52804493
transcript_47062.nnic	chr15	+	1565	6	Antisense	novelGene_ENSG00000166415.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_5	7.52063827078527	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGACCAAGAGGAGGG	NA	False	NA	NA	False	AAAAAG	-44	NA	53492704	53517809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_53493004_53509129_53509183_53509731_53509801_53514003_53514093_53514770_53514904_53516887
transcript_47064.nnic	chr15	+	831	6	Antisense	novelGene_ENSG00000166415.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_5	6.73498329619309	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATGCAATGTATTTATAA	NA	False	NA	-50	True	AATAAA	-21	NA	53492704	53524299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_53493004_53509129_53509183_53509731_53509801_53514003_53514093_53514770_53514904_53524111
transcript_47066.nnic	chr15	+	887	6	Antisense	novelGene_ENSG00000166415.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_5	6.73498329619309	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACATAAGATATGTTTG	NA	False	NA	6	True	AATAAA	-20	NA	53492704	53524355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_53493004_53509129_53509183_53509731_53509801_53514003_53514093_53514770_53514904_53524111
transcript_47068.nnic	chr15	+	890	5	Antisense	novelGene_ENSG00000166415.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	22	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAAGACAAAATTTTTAAA	NA	False	NA	NA	False	CATAAA	-30	NA	53492704	53515150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_53493004_53509129_53509183_53509731_53509801_53514003_53514093_53514770
transcript_4707.known	chr1	-	1526	6	FSM	ENSG00000280670.3	ENST00000626657.2	1526	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.506519890914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTACTAAAGCAATCCTC	-17	True	NA	NA	False	NA	NA	NA	45499974	45494391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45495167_45495417_45495474_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_47072.known	chr15	-	4333	3	FSM	ENSG00000166415.15	ENST00000567224.1	4333	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTGTTTGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	53541103	53513740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_53517755_53523217_53523323_53540889
transcript_47073.known	chr15	-	4224	3	FSM	ENSG00000166415.15	ENST00000614174.4	4224	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGTTTTTTGTTTGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	53541080	53513741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_53517755_53523217_53523323_53540974
transcript_47078.nnic	chr15	+	907	4	Antisense	novelGene_ENSG00000259301.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_3	7.78888096369861	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTGCATTAAAAATGTCA	NA	False	NA	NA	False	AATAAA	-15	NA	53811818	53887267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_53812011_53876877_53877059_53878173_53878299_53886858
transcript_4708.known	chr1	-	2229	6	FSM	ENSG00000280670.3	ENST00000626177.2	2229	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7.44580418759451	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	-10	True	NA	60	True	ATTAAA	-18	NA	45500079	45493865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_47081.nnic	chr15	+	895	3	Antisense	novelGene_ENSG00000259301.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	5.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAAGAGCTAGCTGC	NA	False	NA	NA	False	AAAAAG	-7	NA	53811818	53878695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_53812011_53876877_53877059_53878173
transcript_47083.nnic	chr15	+	379	3	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_2	11.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAGAAAGTTGAGTT	NA	False	NA	NA	False	AAAAAG	-5	NA	53876873	53917404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr15_+_53877059_53878173_53878299_53917335
transcript_4709.known	chr1	-	2053	5	FSM	ENSG00000280670.3	ENST00000625766.2	2053	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	11.5542200082913	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGAGTGATACACTGAT	21	True	NA	0	True	AATAAA	-27	NA	45500048	45493925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45499344_45499444_45499531
transcript_47092.known	chr15	-	1778	6	FSM	ENSG00000137876.11	ENST00000569386.2	1778	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	877.234427049007	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAAATACATTAAGTAAC	216	False	NA	38	True	NA	NA	NA	55196709	55181141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196352
transcript_47094.known	chr15	-	1395	6	FSM	ENSG00000137876.11	ENST00000677730.1	1395	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	876.540244369875	5522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATATTTATTCTTTA	NA	False	NA	-2	True	AATAAA	-16	NA	55196958	55181314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55182220_55183310_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
transcript_4710.known	chr1	-	2095	5	FSM	ENSG00000280670.3	ENST00000629482.3	2095	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	8.74642784226795	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	-4	True	NA	60	True	ATTAAA	-18	NA	45500073	45493865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45495167_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_47100.known	chr15	-	3447	7	FSM	ENSG00000069974.16	ENST00000336787.6	3447	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	8.67307455417179	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGAACGTAACTG	-25	True	NA	0	True	AATAAA	-22	NA	55289813	55202965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55289715
transcript_47103.nnic	chr15	-	979	6	NIC	ENSG00000069974.16	novel	3447	7	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	15.7784663386528	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCAGCTTTGTAAAT	-5	True	NA	0	True	AATAAA	-21	NA	55289848	55205348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55289715
transcript_47105.known	chr15	-	1013	7	FSM	ENSG00000069974.16	ENST00000569493.5	1013	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	16.1012421881046	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTGTTGCAGCTTTGT	10	True	NA	-4	True	AATAAA	-17	NA	55270909	55205352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55270858
transcript_47106.known	chr15	-	4589	16	FSM	ENSG00000261771.5	ENST00000565113.5	4589	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	51.1096424909777	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGAGTACTGTTTCA	2	True	NA	-23	True	AATAAA	-24	NA	55498360	55355247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55432496_55432603_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47108.nnic	chr15	+	997	3	NIC	ENSG00000069943.10	novel	1910	12	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	25	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAGTTTTATTGTTTC	5	True	NA	8	True	AATAAA	-19	NA	55318960	55355648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_55319414_55354797_55354979_55355285
transcript_47115.known	chr15	+	1668	12	FSM	ENSG00000069943.10	ENST00000539642.5	1668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.5874394062067	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCCTAGATAAATTAAC	23	True	NA	NA	False	NA	NA	NA	55319250	55355432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_55319414_55320274_55320411_55321269_55321391_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_47131.known	chr15	+	1812	9	FSM	ENSG00000069943.10	ENST00000565367.5	1812	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.5755844542508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTAGTTTTATTGTTT	4	True	NA	7	True	AATAAA	-18	NA	55318959	55355647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_55319414_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_47133.known	chr15	-	3553	9	FSM	ENSG00000260916.8	ENST00000442196.8	3553	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	32.6831378542514	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTTCAGTCAATTTT	-10	True	NA	-14	True	AATAAA	-33	NA	55408359	55355238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_47140.known	chr15	-	6822	8	FSM	ENSG00000260916.8	ENST00000310958.10	6822	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	14.4321070632709	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTGAGTACTGTTT	NA	False	NA	-25	True	AATAAA	-22	NA	55408510	55355249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_47141.known	chr15	-	2970	8	FSM	ENSG00000260916.8	ENST00000569205.5	2970	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	37.096124446896	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAAGAGGCAAACTAAGC	4	True	NA	NA	False	GATAAA	-9	NA	55408052	55359017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55407846
transcript_47158.known	chr15	+	868	2	FSM	ENSG00000261652.3	ENST00000569691.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAAAAGCCTTTCATAT	-15	True	NA	103	True	AATAAA	-35	NA	55408494	55418798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_55408787_55418222
transcript_47159.known	chr15	-	944	2	FSM	ENSG00000225973.4	ENST00000436697.3	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	18	True	NA	-7	True	AATAAA	-27	NA	55319123	55317183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55317868_55318863
transcript_47160.known	chr15	-	371	2	FSM	ENSG00000225973.4	ENST00000565225.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTATGCCAAAGATCAGA	34	False	NA	NA	False	NA	NA	NA	55319107	55317703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55317868_55318900
transcript_47161.known	chr15	-	801	2	FSM	ENSG00000225973.4	ENST00000567948.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAAAACCCACAAATA	-20	True	NA	NA	False	AAAACA	-4	NA	55319161	55317321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55317868_55318906
transcript_47162.nnic	chr15	-	949	2	NIC	ENSG00000225973.4	novel	944	2	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	NA	False	NA	-7	True	AATAAA	-27	NA	55319195	55317183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_55317868_55318930
transcript_47163.known	chr15	-	1445	8	FSM	ENSG00000256061.7	ENST00000448430.6	1445	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.0915374807517	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	14	True	NA	3	True	ATTAAA	-22	NA	55498348	55417754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55418134_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47164.known	chr15	-	1567	8	FSM	ENSG00000256061.7	ENST00000457155.6	1567	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.2864823126702	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-15	True	NA	NA	False	AATAAA	-15	NA	55498377	55430307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55430780_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47167.known	chr15	-	965	3	FSM	ENSG00000069869.17	ENST00000508075.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGCAAATCAAAACCACTA	4	True	NA	NA	False	AAGAAA	-27	NA	55993602	55987208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55988002_55991925_55992006_55993510
transcript_47170.nic	chr15	-	1145	5	ISM	ENSG00000181827.16	ENST00000559447.8	10885	10	380	15861	380	413	intron_retention	FALSE	canonical	3	54	junction_1	5.80409338312195	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATCTTATGGA	1604	False	NA	NA	False	NA	NA	NA	56243499	56103140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_56103671_56142777_56142901_56144400_56144484_56179269_56179304_56243124
transcript_47176.nic	chr15	+	1658	12	ISM	ENSG00000151575.14	ENST00000352903.6	1433	13	-219	17191	-219	-1439	5prime_fragment	FALSE	canonical	3	29	junction_6	8.9220684700984	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATTCTCCTCCCTTA	8066	False	NA	21	True	AATAAA	-18	NA	56365207	56428683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660_56394835_56412301_56412437_56427604_56427740_56428366
transcript_47178.nic	chr15	+	2970	12	ISM	ENSG00000151575.14	ENST00000352903.6	1433	13	-92	15752	-92	0	5prime_fragment	FALSE	canonical	3	29	junction_6	8.9220684700984	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATGAAATGGCATTT	8193	False	NA	12	True	AATAAA	-27	NA	56365334	56430122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660_56394835_56412301_56412437_56427604_56427740_56428366
transcript_47187.known	chr15	+	2297	9	FSM	ENSG00000151575.14	ENST00000561221.6	2297	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	10.256095748383	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACTTAGACAAAATTTAT	11	True	NA	NA	False	AATAAA	-14	NA	56365445	56396298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660
transcript_47192.known	chr15	+	4440	8	FSM	ENSG00000151575.14	ENST00000558083.2	4440	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	10.9414023650666	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTCTTGCAGTGGCTA	12	True	NA	NA	False	ATTAAA	-21	NA	56365446	56398341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660
transcript_47208.known	chr15	-	2030	10	FSM	ENSG00000138587.6	ENST00000260453.4	2030	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.496903994999953	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTTTTTGGTCTACTG	0	True	NA	NA	False	AATAAA	-22	NA	56465137	56428723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56429194_56431372_56431499_56434137_56434396_56443429_56443538_56443637_56443855_56444443_56444674_56446840_56446944_56456393_56456522_56464025_56464248_56464969
transcript_47215.known	chr15	-	3666	6	FSM	ENSG00000137871.21	ENST00000558320.5	3666	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	20.0299775336868	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATTCTCTGTTTTA	4	True	NA	NA	False	AATAAA	-9	NA	56733494	56697762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
transcript_47216.nic	chr15	-	1741	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	-116	33329	-46	1349	5prime_fragment	FALSE	canonical	3	63	junction_4	8.59302042357633	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTACACTTGAATGTGT	6	False	NA	-8	True	ATTAAA	-20	NA	56733623	56699823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_47218.nic	chr15	-	583	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	-111	34482	-41	196	5prime_fragment	FALSE	canonical	3	63	junction_4	8.59302042357633	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCAGATAGTTCTGTT	-1	True	NA	-16	True	AATAAA	-18	NA	56733618	56700976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_47222.known	chr15	-	541	2	FSM	ENSG00000137871.21	ENST00000560298.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCATCTTAAATATTTG	10	True	NA	NA	False	NA	NA	NA	56733577	56732603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56733025_56733457
transcript_47223.known	chr15	-	4399	22	FSM	ENSG00000137871.21	ENST00000267807.12	4399	22	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	24.3224745130899	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTCCAATCACTG	-11	True	NA	-12	True	AATAAA	-18	NA	56733509	56630175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56632123_56635194_56635251_56642951_56642998_56654197_56654235_56654384_56654504_56658423_56658487_56666394_56666536_56666678_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_47224.nnic	chr15	-	484	5	ISM	ENSG00000137871.21	ENST00000559237.5	4902	21	498	70796	-11	196	5prime_fragment	FALSE	canonical	2	2	junction_3	32.5221078652661	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCAGATAGTTCTGTT	-1	True	NA	-16	True	AATAAA	-18	NA	56733588	56700976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707262_56707307_56733457
transcript_47226.nnic	chr15	-	1111	3	NNC	ENSG00000285331.2	novel	1441	2	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	17	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	990	False	56918504	-30	True	AATAAA	-19	NA	56918474	56916725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_56917213_56917539_56917695_56918005
transcript_47228.nnic	chr15	-	910	3	NNC	ENSG00000285331.2	novel	1441	2	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	18.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	990	False	56918504	-30	True	AATAAA	-19	NA	56918474	56916725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_56917213_56917539_56917695_56918206
transcript_47229.known	chr15	-	1441	2	FSM	ENSG00000285331.2	ENST00000560587.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	971	False	NA	-30	True	AATAAA	-19	NA	56918493	56916725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56917213_56917539
transcript_47230.known	chr15	+	596	2	FSM	ENSG00000276524.1	ENST00000621974.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCCAGGCTCTG	NA	False	NA	NA	False	AATAAA	-15	NA	56887106	56888219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56887171_56887687
transcript_47231.known	chr15	+	6114	21	FSM	ENSG00000140262.18	ENST00000333725.10	6114	21	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_15	55.0103626601389	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	-33	True	NA	NA	False	AATAAA	-37	NA	56918643	57289853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_47234.known	chr15	+	6061	20	FSM	ENSG00000140262.18	ENST00000267811.9	6061	20	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_14	35.1426850176435	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	-52	True	NA	NA	False	AATAAA	-37	NA	56918624	57289853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_47241.known	chr15	+	1809	14	FSM	ENSG00000140262.18	ENST00000543579.5	1809	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	89.7770413845506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGAAAAAACAAAACACT	-3	True	NA	NA	False	NA	NA	NA	57219429	57286251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_47242.known	chr15	+	3956	13	FSM	ENSG00000140262.18	ENST00000343827.7	3956	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	79.957410538361	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGTAAAATAGTGAGT	33	False	NA	10	True	AATAAA	-18	NA	57219465	57288506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_47247.nnic	chr15	+	907	6	NNC	ENSG00000140262.18	novel	6061	20	NA	NA	-95	1131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	120.727130339456	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATGTATTATCATTCCA	0	True	NA	NA	False	AATAAA	-22	NA	56918527	57093154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57092973
transcript_47251.nic	chr15	+	1175	4	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	-97	225478	-95	-27454	5prime_fragment	FALSE	canonical	3	258	junction_1	27.4347711247363	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAACAAAAAACCCCCAA	0	True	NA	NA	False	AAAACA	-5	NA	56918527	57064375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749
transcript_47252.nic	chr15	+	1613	4	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	-97	225040	-95	-27016	5prime_fragment	FALSE	canonical	3	258	junction_1	27.4347711247363	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAGAGAGAAAGACTTT	0	True	NA	NA	False	NA	NA	NA	56918527	57064813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749
transcript_47253.known	chr15	+	4786	21	FSM	ENSG00000140262.18	ENST00000438423.6	4786	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	82.248692998734	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTGAGTTTTTTACA	-54	True	NA	18	True	AATAAA	-26	NA	56918622	57288514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56918907_56919901_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_47254.known	chr15	+	2141	3	FSM	ENSG00000247982.7	ENST00000502027.1	2141	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACAGAACTGTGGCTT	4058	False	NA	NA	False	AATAAA	-27	NA	57304724	57307758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57306623_57307042_57307069_57307541
transcript_47255.known	chr15	+	1470	1	FSM	ENSG00000247982.7	ENST00000613170.1	1470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTTTCATGT	5633	False	NA	NA	False	AATAAA	-38	NA	57306299	57307769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57306300_57307800
transcript_47270.nnic	chr15	+	871	7	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9044	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7426099692057	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	9673	False	NA	22	True	AGTAAA	-16	NA	57386189	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57386305_57396923_57397107_57398340_57398431_57402018_57402039_57402660_57402715_57405965_57406065_57406972
transcript_47276.nnic	chr15	+	988	7	NNC	ENSG00000128849.11	novel	915	8	NA	NA	10850	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.7426099692057	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	1777	False	NA	22	True	AGTAAA	-16	NA	57387995	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57388228_57396923_57397107_57398340_57398431_57402018_57402039_57402660_57402715_57405965_57406065_57406972
transcript_47291.nnic	chr15	+	526	4	NIC	ENSG00000128849.11	novel	7214	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.4742552876052	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	-12	True	NA	22	True	AGTAAA	-16	NA	57376504	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_57376568_57402660_57402715_57405965_57406065_57406972
transcript_47293.nnic	chr15	+	586	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9036	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.556349186104	151	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	9665	False	NA	22	True	AGTAAA	-16	NA	57386181	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57386305_57402660_57402715_57405965_57406065_57406972
transcript_47298.nnic	chr15	+	550	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9071	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	-2	True	NA	22	True	AGTAAA	-16	NA	57386216	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57386305_57405395_57405449_57405965_57406065_57406972
transcript_47299.nnic	chr15	+	732	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	10813	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.8996644257513	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	1740	False	NA	22	True	AGTAAA	-16	NA	57387958	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57388228_57402660_57402715_57405965_57406065_57406972
transcript_47304.nnic	chr15	+	472	3	NIC	ENSG00000128849.11	novel	7214	19	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	-12	True	NA	22	True	AGTAAA	-16	NA	57376504	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_57376568_57405965_57406065_57406972
transcript_47305.nnic	chr15	+	489	3	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9036	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCATCTGTTTTGTTTT	9665	False	NA	24	True	AGTAAA	-18	NA	57386181	57407284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57386305_57402660_57402715_57406972
transcript_47306.nnic	chr15	+	523	3	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9045	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	9674	False	NA	22	True	AGTAAA	-16	NA	57386190	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57386305_57405965_57406065_57406972
transcript_47308.nnic	chr15	+	624	3	NNC	ENSG00000128849.11	novel	915	8	NA	NA	10867	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	1794	False	NA	22	True	AGTAAA	-16	NA	57388012	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57388228_57405965_57406065_57406972
transcript_47309.nnic	chr15	+	537	3	NNC	ENSG00000128849.11	novel	915	8	NA	NA	28175	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	NA	False	NA	22	True	AGTAAA	-16	NA	57405320	57407282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57405449_57405965_57406065_57406972
transcript_47310.known	chr15	+	7214	19	FSM	ENSG00000128849.11	ENST00000281282.6	7214	19	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	35.6762275174456	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	-12	True	NA	24	True	AATAAA	-20	NA	57376504	57550717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547354
transcript_47311.known	chr15	+	2896	7	FSM	ENSG00000255529.9	ENST00000482852.5	2896	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	117.657695597582	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTGGCTTGTTTTTTT	16	True	NA	NA	False	ATTAAA	-16	NA	57706711	57782762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57706956_57708713_57709359_57711983_57712189_57735466_57735655_57751170_57751447_57777594_57777746_57781575
transcript_47312.known	chr15	+	4114	4	FSM	ENSG00000255529.9	ENST00000299638.8	4114	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	11.5854314646552	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTTTGGTGTCTTTC	18	True	NA	NA	False	TATAAA	-18	NA	57706713	57717557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57706956_57708713_57709359_57711983_57712189_57714535
transcript_47313.known	chr15	-	1932	2	FSM	ENSG00000137845.15	ENST00000461408.2	1932	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCAGTCACTGTTGTGT	-59	True	NA	2	True	AATAAA	-28	NA	58749719	58747344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58749037_58749479
transcript_47314.known	chr15	-	11158	16	FSM	ENSG00000137845.15	ENST00000260408.8	11158	16	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_9	74.4322510743831	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTTTGTGGATGAA	-47	True	NA	NA	False	AATAAA	-14	NA	58749707	58588808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_47315.known	chr15	-	995	6	FSM	ENSG00000137845.15	ENST00000558733.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	352.670611194072	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCAGTTATTTCTT	11	True	NA	NA	False	ATTAAA	-21	NA	58749770	58655242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58655417_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_47316.known	chr15	-	1396	2	FSM	ENSG00000245975.2	ENST00000500929.2	1396	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTGCCTAAAAAAGAAT	998	False	NA	NA	False	AATAAA	-20	NA	58770974	58768071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58768880_58770386
transcript_47317.known	chr15	+	4803	14	FSM	ENSG00000157450.16	ENST00000557998.5	4803	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	37.5461845775488	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTCATAATTAGTT	432	False	NA	18	True	AATAAA	-21	NA	58988137	59096431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58988406_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092512_59092641_59094782
transcript_47320.known	chr15	+	1859	9	FSM	ENSG00000128923.11	ENST00000560289.5	1859	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.3143824813255	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGTTATTTTGTAAC	-18	True	NA	NA	False	GATAAA	-21	NA	58771285	58854591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810287_58821716_58821824_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_47323.known	chr15	+	9250	9	FSM	ENSG00000128923.11	ENST00000559228.6	9250	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	11.7553179455087	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTCGCTCTGTATATT	-2	True	NA	NA	False	AATAAA	-20	NA	58771301	58861900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_47324.known	chr15	+	4820	9	FSM	ENSG00000128923.11	ENST00000450403.3	4820	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	21.2893018908559	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58	False	NA	NA	False	AATAGA	-16	NA	58771361	58857533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854484
transcript_47329.known	chr15	-	3021	19	FSM	ENSG00000137776.17	ENST00000557924.5	3021	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_18	173.810640896606	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGTTCATTGCATTTC	-1	True	NA	NA	False	NA	NA	NA	58933599	58879559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58933403
transcript_47342.known	chr15	-	4168	21	FSM	ENSG00000137776.17	ENST00000380516.7	4168	21	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_15	73.5916265617224	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	0	True	NA	-6	True	AATAAA	-16	NA	58933679	58879049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_47343.known	chr15	-	674	4	FSM	ENSG00000137776.17	ENST00000560494.1	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	301.769595699913	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTAAAGTGTTGAGAACCTT	7531	False	NA	-7	True	AATAAA	-21	NA	58887007	58879424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58879777_58879979_58880108_58883625_58883787_58886974
transcript_47344.known	chr15	-	987	3	FSM	ENSG00000137776.17	ENST00000493062.5	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	8	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAAAGTGTTGA	7414	False	NA	-14	True	AATAAA	-14	NA	58887124	58879431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58880108_58883625_58883787_58886974
transcript_47345.known	chr15	-	1373	11	FSM	ENSG00000137776.17	ENST00000249736.11	1373	11	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_5	129.703854992826	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGATGAAAAGAGTAG	19	True	NA	NA	False	AAGAAA	-13	NA	58933579	58894157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_47346.known	chr15	-	896	10	FSM	ENSG00000137776.17	ENST00000558756.5	896	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	159.399412920833	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTATTTTTATTT	5	True	NA	NA	False	GATAAA	-27	NA	58933449	58894089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_47347.known	chr15	-	717	7	FSM	ENSG00000137776.17	ENST00000559880.5	717	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	191.639200930638	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGGAAGACTGCGTG	4	True	NA	NA	False	CATAAA	-5	NA	58933594	58899610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58899710_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_47348.known	chr15	-	3022	19	FSM	ENSG00000137776.17	ENST00000492526.5	3022	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	176.322979812265	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAAAGTGTTGAGAA	19	True	NA	-11	True	AATAAA	-17	NA	58933579	58879428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58916934_58917000_58932355_58932444_58933403
transcript_47349.known	chr15	-	585	5	FSM	ENSG00000137776.17	ENST00000558486.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	220.640403145027	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGCAAGTAAGCCAAAAGA	24	True	NA	NA	False	NA	NA	NA	58933574	58899704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58899938_58901259_58901288_58916934_58917000_58932355_58932444_58933403
transcript_47350.known	chr15	-	8644	28	FSM	ENSG00000157483.9	ENST00000288235.9	8644	28	0	0	0	0	multi-exon	TRUE	canonical	3	224	junction_17	39.0725118171102	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCTTTGGAATATG	-1	True	NA	NA	False	AGTAAA	-20	NA	59372871	59132433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59137457_59138197_59138368_59153589_59153792_59158286_59158380_59161072_59161231_59163156_59163304_59171896_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
transcript_47353.nnic	chr15	-	1283	3	NNC	ENSG00000157483.9	novel	578	2	NA	NA	-19	3518	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	169.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACCAAAGTCACC	226	False	NA	NA	False	NA	NA	NA	59372890	59268727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_59269598_59272429_59272450_59372497
transcript_47354.known	chr15	-	578	2	FSM	ENSG00000157483.9	ENST00000558646.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTTATGCTGGGTGC	-1	True	NA	NA	False	NA	NA	NA	59372871	59272245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59272450_59372497
transcript_47356.known	chr15	+	1488	9	FSM	ENSG00000157456.8	ENST00000288207.7	1488	9	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	46.9674089129899	3848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGTGTATTTATTTGT	19	True	NA	18	True	AATAAA	-23	NA	59105145	59125045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516_59123628_59124766
transcript_47357.known	chr15	-	2515	10	FSM	ENSG00000140299.13	ENST00000612191.4	2515	10	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_1	32.12283522994	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGTTTAATTACC	NA	False	NA	-23	True	AATAAA	-17	NA	59689443	59662864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_47362.known	chr15	-	758	5	FSM	ENSG00000140307.11	ENST00000396061.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	589.843782284767	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATCTTCTGTTATTCAT	0	True	NA	-4	True	AATAGA	-19	NA	59657479	59639108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657123
transcript_47369.known	chr15	-	863	4	FSM	ENSG00000140299.13	ENST00000477543.1	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_3	18.1169043222683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGACTTTTTAAGTAGG	9	True	NA	NA	False	NA	NA	NA	59689309	59679255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59679769_59680240_59680309_59682407_59682515_59689134
transcript_47370.known	chr15	-	1559	5	FSM	ENSG00000140307.11	ENST00000396060.7	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_2	103.094616736278	4499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	8	True	NA	-5	True	AATAAA	-18	NA	59657515	59638061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657405
transcript_47371.known	chr15	-	518	3	FSM	ENSG00000140307.11	ENST00000267869.8	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	690	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGAAGCTATTAAGGTA	26	True	NA	0	True	AATAAA	-26	NA	59657497	59638858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59642135_59642263_59657405
transcript_47372.known	chr15	-	970	6	FSM	ENSG00000140307.11	ENST00000396063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	720.495773755822	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATAACTGGTGAAGC	9	True	NA	-10	True	AATAAA	-16	NA	59657514	59638868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59656814_59657034_59657405
transcript_47373.known	chr15	-	633	4	FSM	ENSG00000140307.11	ENST00000396064.7	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	734.684966499247	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACTGGTGAAGCTAT	3	True	NA	-7	True	AATAAA	-19	NA	59657520	59638865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59650668_59650774_59652205_59652327_59657405
transcript_47374.known	chr15	-	408	4	FSM	ENSG00000140307.11	ENST00000484743.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	716.807893061701	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACACCATCTTCTGTTAT	3	True	NA	-8	True	AATAGA	-15	NA	59657520	59639112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59642135_59642263_59652205_59652327_59657405
transcript_47375.known	chr15	-	1278	2	FSM	ENSG00000140307.11	ENST00000480768.1	1278	2	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATATT	-18	True	NA	NA	False	AAAAAG	-2	NA	59657541	59651184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59652327_59657405
transcript_47376.known	chr15	-	832	5	FSM	ENSG00000140299.13	ENST00000560458.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	17.8518206354422	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACACAGGCGCTAGGT	-21	True	NA	NA	False	AGTAAA	-11	NA	59689339	59677812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_47378.known	chr15	+	795	1	FSM	ENSG00000234797.5	ENST00000484430.1	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9588	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	21	False	NA	NA	False	NA	NA	NA	59768351	59769146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_59768400_59769100
transcript_47379.known	chr15	-	757	3	FSM	ENSG00000259223.2	ENST00000560503.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGATCTGTGCTATTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	60118320	60073553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60074049_60074800_60074936_60118193
transcript_47383.known	chr15	-	1676	14	FSM	ENSG00000182718.18	ENST00000396024.7	1676	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	1078.86460699973	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACATTTCGAATGCTCAG	0	True	NA	-4	True	AATAAA	-32	NA	60397986	60347133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397942
transcript_47384.known	chr15	-	1964	14	FSM	ENSG00000182718.18	ENST00000559780.6	1964	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1084.19913998671	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393037_60393441_60397942
transcript_47385.known	chr15	-	1838	14	FSM	ENSG00000182718.18	ENST00000560468.6	1838	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1082.77585959892	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397942
transcript_47386.known	chr15	-	1709	14	FSM	ENSG00000182718.18	ENST00000559956.6	1709	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_13	1082.77585959892	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397942
transcript_47387.known	chr15	-	1616	14	FSM	ENSG00000182718.18	ENST00000558558.6	1616	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	1084.55532294149	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	0	True	NA	-14	True	AATAAA	-22	NA	60397986	60347143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396372_60396428_60397942
transcript_47390.known	chr15	-	1444	13	FSM	ENSG00000182718.18	ENST00000332680.8	1444	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	831.732612615911	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTACTTTGTGGCCCTGC	1	True	NA	-7	True	AATAAA	-21	NA	60397985	60347331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397870
transcript_47391.known	chr15	-	1560	13	FSM	ENSG00000182718.18	ENST00000679109.1	1560	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_12	836.860249019446	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	4735	False	NA	-14	True	AATAAA	-22	NA	60398157	60347143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398114
transcript_47392.known	chr15	-	1615	13	FSM	ENSG00000182718.18	ENST00000559818.6	1615	13	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_12	837.670015910535	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-2	True	NA	-14	True	AATAAA	-22	NA	60398742	60347143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398644
transcript_47399.known	chr15	-	567	2	FSM	ENSG00000182718.18	ENST00000560495.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGGTTTGTCCAAAAAT	-2	True	NA	NA	False	NA	NA	NA	60397988	60395906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60396428_60397942
transcript_47400.known	chr15	-	1554	13	FSM	ENSG00000182718.18	ENST00000451270.7	1554	13	0	0	0	0	multi-exon	FALSE	canonical	3	2478	junction_12	225.761842927945	6965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	0	True	NA	-21	True	AATAAA	-15	NA	60397986	60347150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_47401.known	chr15	-	1444	14	FSM	ENSG00000182718.18	ENST00000421017.6	1444	14	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_13	978.306512876253	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGAAACACGTACTTT	0	True	NA	-17	True	AATAAA	-11	NA	60397986	60347341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397257_60397339_60397942
transcript_47402.known	chr15	-	1938	12	FSM	ENSG00000182718.18	ENST00000678796.1	1938	12	0	0	0	0	multi-exon	FALSE	canonical	3	2478	junction_11	219.061257895466	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTACTTTGTGGCCCTGCTT	4815	False	NA	-5	True	AATAAA	-23	NA	60398077	60347329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_47403.known	chr15	-	908	3	FSM	ENSG00000182718.18	ENST00000560936.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	119.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCGCAGTCATGGCCGT	0	True	NA	NA	False	ATTAAA	-21	NA	60397986	60395644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60396428_60397257_60397339_60397942
transcript_47404.known	chr15	+	904	5	FSM	ENSG00000245534.7	ENST00000558140.6	904	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGCCTTACTGACAGA	-6	True	NA	NA	False	NA	NA	NA	60479184	60529889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_60479399_60488523_60488592_60510407_60510534_60528579_60528728_60529541
transcript_47406.known	chr15	+	890	5	FSM	ENSG00000245534.7	ENST00000660694.1	890	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGTCTCATGTTTTAT	1	True	NA	NA	False	AATAAA	-44	NA	60479153	60547966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_60479399_60488523_60488592_60510407_60510534_60546264_60546467_60547717
transcript_47416.known	chr15	-	7060	16	FSM	ENSG00000128915.12	ENST00000558181.5	7060	16	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_13	69.506834196358	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTACTGTTGCCATGT	NA	False	NA	-6	True	AATAAA	-19	NA	60479160	60419612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468163_60476062_60476168_60477936_60478070_60479002
transcript_47417.known	chr15	-	7206	16	FSM	ENSG00000128915.12	ENST00000261520.9	7206	16	0	0	0	0	multi-exon	TRUE	canonical	3	289	junction_13	40.4703457965075	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCCATGTCCCC	-26	True	NA	-2	True	AATAAA	-23	NA	60479142	60419608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_47430.known	chr15	-	3796	9	FSM	ENSG00000128915.12	ENST00000561114.5	3796	9	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	50.2885424326456	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTATCATGGATTTTC	0	True	NA	NA	False	AATAAA	-16	NA	60479073	60451094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_47435.known	chr15	-	568	5	FSM	ENSG00000128915.12	ENST00000560520.1	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	182.903492312203	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGTTTCTCTCGTTTCTC	3	True	NA	NA	False	NA	NA	NA	60479113	60468186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60468323_60476062_60476168_60477936_60478070_60478567_60478651_60479002
transcript_47436.known	chr15	-	584	5	FSM	ENSG00000128915.12	ENST00000560406.5	584	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	183.897219935485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCACAGAGAGAGCAGAGG	13	True	NA	-111	True	NA	NA	NA	60479103	60468170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60468323_60476062_60476168_60477936_60478070_60478567_60478661_60479002
transcript_47440.nic	chr15	-	676	4	ISM	ENSG00000128915.12	ENST00000561114.5	3796	9	-109	16970	-22	106	5prime_fragment	FALSE	canonical	3	289	junction_1	68.4446248193871	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTATGTATTGTGTTCT	NA	False	NA	-5	True	AATAAA	-22	NA	60479182	60468064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_60468323_60476062_60476168_60477936_60478070_60479002
transcript_47445.known	chr15	-	1701	10	FSM	ENSG00000069667.16	ENST00000449337.6	1701	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	5.89622184952071	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGAACTTGTTTTTCTC	-16	True	NA	-54	True	AATGAA	-10	NA	60592541	60497284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60592386
transcript_47454.nic	chr15	-	515	5	ISM	ENSG00000129003.19	ENST00000395898.3	11012	80	-57	165698	-32	-49729	5prime_fragment	FALSE	canonical	2	6	junction_1	4.96865172858795	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAAAGTTTTTTTGAGA	383	False	NA	NA	False	AAAAAG	-12	NA	62060505	62033441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_62033543_62034956_62035053_62041323_62041367_62044211_62044256_62060274
transcript_47456.nic	chr15	-	446	5	ISM	ENSG00000129003.19	ENST00000395898.3	11012	80	-57	165767	-32	-49798	5prime_fragment	FALSE	canonical	2	6	junction_1	4.96865172858795	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGCAGGATGTTAAACA	383	False	NA	NA	False	AAGAAA	-3	NA	62060505	62033510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_62033543_62034956_62035053_62041323_62041367_62044211_62044256_62060274
transcript_47458.known	chr15	+	648	2	FSM	ENSG00000259251.2	ENST00000560813.2	648	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGTAGTGCCTTTTTAAG	NA	False	NA	NA	False	TATAAA	-9	NA	62060502	62061274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_62060844_62060967
transcript_47467.nic	chr15	+	1142	10	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	309	junction_9	623.886029477963	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	25	False	NA	26	True	AATAAA	-15	NA	63042736	63066093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_47468.known	chr15	+	1295	10	FSM	ENSG00000140416.23	ENST00000288398.10	1295	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	679.716934547839	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	NA	False	NA	26	True	AATAAA	-15	NA	63042631	63066093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_47469.known	chr15	+	1217	10	FSM	ENSG00000140416.23	ENST00000403994.9	1217	10	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_9	730.254597916218	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTAGTGTTTGGCTG	-2	True	NA	16	True	AATAAA	-24	NA	63042746	63066178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_47470.known	chr15	+	1097	10	FSM	ENSG00000140416.23	ENST00000560970.6	1097	10	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_9	768.746020766576	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	81	False	NA	26	True	AATAAA	-15	NA	63042829	63066093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_47482.nic	chr15	+	1062	9	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	189	junction_8	571.324215638546	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTTGCTATTCTTT	25	False	NA	25	True	AATAAA	-14	NA	63042736	63066092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63065895
transcript_47484.known	chr15	+	1717	9	FSM	ENSG00000140416.23	ENST00000358278.7	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_8	225.619390511986	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	-2	True	NA	11	True	AATAAA	-1	NA	63042684	63071889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_47489.known	chr15	+	977	9	FSM	ENSG00000140416.23	ENST00000559556.5	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_5	607.384646970106	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACCTGCTTACCCCTT	9	True	NA	NA	False	NA	NA	NA	63042757	63071222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_47491.known	chr15	+	933	9	FSM	ENSG00000140416.23	ENST00000559397.6	933	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	790.797767684634	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTCTTTCGTTTTGTT	21	False	NA	NA	False	NA	NA	NA	63042769	63071190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_47492.known	chr15	+	1670	9	FSM	ENSG00000140416.23	ENST00000267996.11	1670	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	842.382697694462	10233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	9	True	NA	37	True	AATAAA	-27	NA	63042757	63071915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_47497.known	chr15	+	941	9	FSM	ENSG00000140416.23	ENST00000559281.6	941	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_8	781.931173042104	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	23	False	NA	26	True	AATAAA	-15	NA	63048575	63066093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_47505.known	chr15	+	943	8	FSM	ENSG00000140416.23	ENST00000404484.9	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	546.279550174428	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGTCACAGAAACATC	-18	True	NA	NA	False	TTTAAA	-38	NA	63048470	63071263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_47507.nic	chr15	+	495	4	ISM	ENSG00000140416.23	ENST00000560970.6	1097	10	-93	6503	-10	0	5prime_fragment	FALSE	canonical	3	1566	junction_2	200.237081702888	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAGATGAAGAAAAAAT	25	False	NA	NA	False	NA	NA	NA	63042736	63059590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562
transcript_47511.known	chr15	+	3957	2	FSM	ENSG00000140416.23	ENST00000610733.1	3957	2	0	0	0	0	multi-exon	FALSE	canonical	3	1643	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCTATCATTTGAGTT	0	True	NA	38	True	AAAACA	-20	NA	63042686	63047726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026
transcript_47512.known	chr15	+	1968	8	FSM	ENSG00000140416.23	ENST00000558910.3	1968	8	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	783.679911750731	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAATGTTTCAGAGTTC	-2	True	NA	10	True	ATTAAA	-26	NA	63048486	63065278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063
transcript_47513.known	chr15	+	1807	10	FSM	ENSG00000140416.23	ENST00000357980.9	1807	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	800.685323741057	10234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	-2	True	NA	37	True	AATAAA	-27	NA	63042746	63071915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63043705_63043832_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_47514.known	chr15	+	1911	6	FSM	ENSG00000103642.12	ENST00000261893.9	1911	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	22.8087702430447	486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACTTTCTGCATGTGTAA	-1	True	NA	12	True	AATAAA	-17	NA	63121860	63142061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63122229_63122635_63122703_63126858_63127050_63127352_63127690_63129484_63129651_63141279
transcript_47515.known	chr15	-	693	5	FSM	ENSG00000185088.14	ENST00000635699.1	693	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	1242.05082424191	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-1	True	NA	-7	True	AATAAA	-19	NA	63157477	63153852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786_63156974_63157399
transcript_47519.known	chr15	-	923	4	FSM	ENSG00000185088.14	ENST00000455271.5	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1169.38739897815	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	729	False	NA	-7	True	AATAAA	-19	NA	63157281	63153852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786
transcript_47523.known	chr15	-	528	4	FSM	ENSG00000185088.14	ENST00000411926.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1173.62979209327	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAATCCCCTCTTTTTCT	-11	True	NA	-13	True	AATAAA	-13	NA	63158021	63153858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157915
transcript_47525.known	chr15	-	6110	4	FSM	ENSG00000185088.14	ENST00000330964.10	6110	4	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_3	46.3105459551781	12136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATTGGATTGGTAAAT	-1	True	NA	NA	False	AATAAA	-22	NA	63157477	63148248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157399
transcript_47526.known	chr15	-	2944	2	FSM	ENSG00000185088.14	ENST00000482846.1	2944	2	0	0	0	0	multi-exon	FALSE	canonical	3	2474	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-1	True	NA	-7	True	AATAAA	-19	NA	63157477	63153852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63155732_63156412
transcript_47529.known	chr15	+	774	9	FSM	ENSG00000166128.13	ENST00000558119.5	774	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	124.432147674948	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCACCCAGCCTCAGA	10	True	NA	NA	False	NA	NA	NA	63189593	63263679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63251283_63251343_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_47534.known	chr15	+	4800	8	FSM	ENSG00000166128.13	ENST00000321437.9	4800	8	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	37.4002073550947	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATGGCTCTCTGAAAT	22	True	NA	16	True	AATAAA	-23	NA	63189605	63267776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_47538.known	chr15	+	584	7	FSM	ENSG00000166128.13	ENST00000559006.1	584	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	37.2006571029181	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTTTGGCATTTGAT	22	True	NA	56	True	NA	NA	NA	63189605	63262776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691
transcript_47545.known	chr15	+	4138	6	FSM	ENSG00000138613.14	ENST00000261879.10	4138	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	10.590561835899	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGTTTCCTGTTCT	-1	True	NA	20	True	AATAAA	-22	NA	63277604	63309126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63287423_63287547_63302344_63302473_63305613
transcript_47546.known	chr15	+	685	5	FSM	ENSG00000138613.14	ENST00000380343.8	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	42.9825546006749	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCGCAGACTACATCT	4	True	NA	-88	True	NA	NA	NA	63277609	63305801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63302344_63302473_63305613
transcript_47551.known	chr15	+	5499	16	FSM	ENSG00000140455.17	ENST00000559192.5	5499	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	34.4547368135194	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	13	False	NA	22	True	ATTAAA	-23	NA	63504733	63594640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63504831_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_47553.known	chr15	+	2439	16	FSM	ENSG00000140455.17	ENST00000558157.5	2439	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	31.7651101402501	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTCCTGCAAATACAA	12	True	NA	-6	True	AATAAA	-17	NA	63504634	63591444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_47554.known	chr15	+	5517	15	FSM	ENSG00000140455.17	ENST00000380324.8	5517	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	12.4261081302758	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACTTATTTCTGAAC	-30	True	NA	15	True	ATTAAA	-16	NA	63504592	63594633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63504831_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_47556.known	chr15	+	5474	14	FSM	ENSG00000140455.17	ENST00000540797.5	5474	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.6053699279731	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	470	False	NA	22	True	ATTAAA	-23	NA	63504510	63594640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63504831_63532646_63532708_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_47562.nic	chr15	+	1423	12	ISM	ENSG00000140455.17	ENST00000380324.8	5517	15	-88	6237	-6	0	5prime_fragment	TRUE	canonical	3	91	junction_5	10.5869091158893	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTGGATTCAAAAACT	464	False	NA	NA	False	CATAAA	-28	NA	63504504	63588396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_63504831_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304
transcript_47570.known	chr15	-	508	3	FSM	ENSG00000259248.7	ENST00000560622.5	508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACCTATAAAAATTGAATT	36	True	NA	NA	False	AATAAA	-29	NA	63600739	63591070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63591336_63594694_63594787_63600588
transcript_47575.known	chr15	-	539	4	FSM	ENSG00000035664.11	ENST00000559731.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGGAGTGTGGACTTAG	NA	False	NA	NA	False	CATAAA	-36	NA	63916592	63908252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63908601_63911907_63911992_63912107_63912198_63916575
transcript_47576.known	chr15	-	636	6	FSM	ENSG00000166797.11	ENST00000559705.1	636	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	517.848008589393	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAACTTACGGGAAATT	-23	True	NA	NA	False	GATAAA	-33	NA	64093853	64072980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64090197_64090316_64093644
transcript_47584.known	chr15	-	919	5	FSM	ENSG00000166797.11	ENST00000300030.8	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_2	120.175912727967	7311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTCACTGTTTTTAT	-8	True	NA	-22	True	AATAAA	-18	NA	64093838	64072564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64093644
transcript_47585.known	chr15	-	826	4	FSM	ENSG00000166797.11	ENST00000380290.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	414.153219097581	1899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGATTCTTATAATGAC	22	True	NA	-35	True	AATAAA	-5	NA	64093808	64072577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64073029_64075491_64075538_64088686_64088852_64093644
transcript_47590.known	chr15	+	8214	15	FSM	ENSG00000028528.15	ENST00000559844.6	8214	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.845305887103	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCCAGTGCATCCTTTGA	-11	True	NA	14	True	AATAAA	-22	NA	64095981	64144231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_47596.known	chr15	+	1374	13	FSM	ENSG00000028528.15	ENST00000561026.5	1374	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	118.492850229689	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAAGGACCCCAGAGC	21	True	NA	NA	False	NA	NA	NA	64096013	64137618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64096173_64112572_64112685_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_47603.known	chr15	+	3373	15	FSM	ENSG00000028528.15	ENST00000261889.9	3373	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	147.900769961153	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCCTCAGTTTGGATT	0	True	NA	NA	False	AATACA	-14	NA	64095992	64139875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64096173_64112572_64112685_64118116_64118245_64118787_64118855_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64138041
transcript_47604.known	chr15	+	3600	7	FSM	ENSG00000157734.14	ENST00000325881.9	3600	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.62466929133727	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGCGTCTGTCCACGT	5	True	NA	21	True	AATAAA	-18	NA	64151730	64157481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64151851_64152242_64152327_64152637_64152743_64153244_64153340_64153651_64153685_64153934_64154003_64154386
transcript_47607.known	chr15	-	888	5	FSM	ENSG00000166794.6	ENST00000680343.1	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2360.40974991631	9605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	582	False	NA	NA	False	NA	NA	NA	64162581	64155739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162492
transcript_47609.known	chr15	-	869	5	FSM	ENSG00000166794.6	ENST00000681658.1	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_4	2151.41052567844	9660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-30	True	NA	NA	False	NA	NA	NA	64163026	64155739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162956
transcript_47612.known	chr15	-	893	5	FSM	ENSG00000166794.6	ENST00000300026.4	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	5179	junction_4	144.993965391667	30970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGGGCCTGGTT	-26	True	NA	NA	False	AATAAA	-30	NA	64163022	64155816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
transcript_47613.known	chr15	-	4064	4	FSM	ENSG00000166794.6	ENST00000561048.2	4064	4	0	0	0	0	multi-exon	FALSE	canonical	3	5179	junction_3	164.140183989174	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTTTTTTTTTTAATA	-23	True	NA	NA	False	AATAAA	-10	NA	64163019	64155836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64160198_64162040_64162155_64162851
transcript_47614.known	chr15	-	1050	6	FSM	ENSG00000166794.6	ENST00000680158.1	1050	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2640.6925303791	9641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGGGCCTGGTT	29	False	NA	NA	False	AATAAA	-30	NA	64163134	64155816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64156910_64159266_64159312_64160103_64160198_64162040_64162155_64162851
transcript_47615.known	chr15	-	2485	13	FSM	ENSG00000169118.18	ENST00000634654.1	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	11.7505910016854	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCTGGTTATATTGG	57	False	NA	-4	True	TTTAAA	-32	NA	64356071	64171133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64171986_64180347_64180455_64188374_64188486_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_47622.known	chr15	-	8085	12	FSM	ENSG00000169118.18	ENST00000303052.13	8085	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	7.2590781009735	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGAAGAAGAAAATTAT	-45	True	NA	1	True	AATAAA	-20	NA	64356173	64165524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64171986_64180347_64180455_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_47632.nic	chr15	-	2033	3	FSM	ENSG00000166803.14	ENST00000380258.6	911	3	-61	-1061	-61	0	multi-exon	FALSE	canonical	3	286	junction_1	664.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTGTGCTTCCTAA	9451	False	NA	-18	True	AATAAA	-27	NA	64381505	64364303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64380957_64381039_64381325
transcript_47640.known	chr15	-	749	3	FSM	ENSG00000166803.14	ENST00000559519.5	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	716	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAGTATTAATTAAACA	-1	True	NA	-71	True	ATTAAA	-2	NA	64381441	64365605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64376742_64376906_64381325
transcript_47641.known	chr15	-	2132	4	FSM	ENSG00000166803.14	ENST00000300035.9	2132	4	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_2	142.323574997258	8207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTGTGCTTCCTAA	-1	True	NA	-18	True	AATAAA	-27	NA	64381441	64364303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64381325
transcript_47642.known	chr15	-	766	5	FSM	ENSG00000166803.14	ENST00000558008.3	766	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	723.822276183871	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTGCTTAGA	2	True	NA	35	True	NA	NA	NA	64381438	64365733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64373697_64373765_64376742_64376906_64380957_64381039_64381325
transcript_47643.known	chr15	-	690	4	FSM	ENSG00000166803.14	ENST00000560234.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	645.88406252378	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGTAAGACTAATTAT	3272	False	NA	21	True	TTTAAA	-33	NA	64387684	64365867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64387446
transcript_47646.nnic	chr15	+	1942	13	NIC	ENSG00000103671.10	novel	761	6	NA	NA	-17	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	43.7856997203425	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	NA	False	NA	14	True	TATAAA	-21	NA	64387730	64455303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_64387789_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_47649.nnic	chr15	+	2103	13	NIC	ENSG00000103671.10	novel	2013	13	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	40.3130114093315	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	-17	True	NA	14	True	TATAAA	-21	NA	64387829	64455303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_64388049_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_47661.known	chr15	+	2013	13	FSM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_7	11.4041902630373	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	-11	True	NA	14	True	TATAAA	-21	NA	64387835	64455303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_47662.known	chr15	+	1536	9	FSM	ENSG00000103671.10	ENST00000560567.5	1536	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	54.2849829602994	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAGTGCAAATAAAA	12	True	NA	NA	False	NA	NA	NA	64387858	64424330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64418540_64418729_64424030
transcript_47663.known	chr15	+	8746	9	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	38714	0	-3086	0	3prime_fragment	FALSE	canonical	3	19	junction_2	15.8936897855721	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGACTTAGTTTGCCTTT	NA	False	NA	50	True	AATAAA	-25	NA	64499291	64686068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_64500167_64622826_64623053_64670345_64670434_64673915_64676257_64678115_64678483_64680184_64680361_64680645_64680863_64681308_64681388_64681691
transcript_47665.nic	chr15	+	1461	3	ISM	ENSG00000180357.10	ENST00000326648.5	9006	10	38905	15172	-2895	463	internal_fragment	FALSE	canonical	3	19	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATGAATTGTGTATTAA	107	False	NA	NA	False	AAAAAG	-32	NA	64499482	64670896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_64500167_64622826_64623053_64670345
transcript_47666.known	chr15	+	348	1	FSM	ENSG00000243403.1	ENST00000483963.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGAGTTCTTAAAGAC	20	False	NA	NA	False	NA	NA	NA	64592978	64593326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64593000_64593300
transcript_47684.known	chr15	-	785	4	FSM	ENSG00000180304.14	ENST00000559753.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	1249.53546924002	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTTTATGAACTGGCA	10	True	NA	-42	True	AGTAAA	-3	NA	64703201	64688484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64703028
transcript_47691.known	chr15	-	1934	6	FSM	ENSG00000180304.14	ENST00000326005.10	1934	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	1118.04998099369	15190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTATTCTTTATTTCT	NA	False	NA	-5	True	AATAAA	-18	NA	64703281	64687572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_47692.known	chr15	-	1744	5	FSM	ENSG00000180304.14	ENST00000560258.6	1744	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1415.90695315759	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTCAATAAACTGATT	3	True	NA	-36	True	NA	NA	NA	64703208	64687603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64688835_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_47693.known	chr15	-	707	3	FSM	ENSG00000180304.14	ENST00000560837.5	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	2669	junction_1	173.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATGCCTGCCGGTTAA	17	False	NA	NA	False	ATTAAA	-20	NA	64703194	64690166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64690550_64691433_64691592_64703028
transcript_47695.nnic	chr15	-	1826	8	NNC	ENSG00000166831.9	novel	1746	8	NA	NA	2371	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	548.839666561954	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	2679	False	NA	-12	True	AATAAA	-15	NA	64773218	64739891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64773051
transcript_47697.nnic	chr15	-	1790	8	NNC	ENSG00000166831.9	novel	1746	8	NA	NA	803	0	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_7	504.024375827768	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	1111	False	NA	-12	True	AATAAA	-15	NA	64774786	64739891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64774655
transcript_47698.known	chr15	-	2017	8	FSM	ENSG00000166831.9	ENST00000300069.5	2017	8	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_2	161.68046087444	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	-4	True	NA	-11	True	AATAAA	-16	NA	64775589	64739890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
transcript_47702.nnic	chr15	-	1881	8	NNC	ENSG00000166831.9	novel	1746	8	NA	NA	-1327	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_7	508.689071465636	456	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	NA	False	NA	-12	True	AATAAA	-15	NA	64776916	64739891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64776694
transcript_47708.known	chr15	-	1746	8	FSM	ENSG00000166831.9	ENST00000560606.5	1746	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	548.503939300869	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	NA	False	NA	-12	True	AATAAA	-15	NA	64761217	64739891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64761130
transcript_4771.known	chr1	-	1234	6	FSM	ENSG00000117450.15	ENST00000262746.5	1234	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3249.31176712854	6238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	3238	False	NA	-20	True	ATTAAA	-28	NA	45521938	45511035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521608
transcript_47713.nnic	chr15	-	1293	2	NNC	ENSG00000140451.13	novel	1631	3	NA	NA	-1538	20	intron_retention	FALSE	canonical	3	7	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGAGGCTTTGGGTAT	2638	False	NA	NA	False	NA	NA	NA	64822995	64821569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64822133_64822265
transcript_4772.known	chr1	-	1107	6	FSM	ENSG00000117450.15	ENST00000447184.6	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_5	3053.83421946903	3967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	3238	False	NA	NA	False	NA	NA	NA	45521938	45510913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521857
transcript_47735.known	chr15	+	3689	6	FSM	ENSG00000241839.10	ENST00000323544.5	3689	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.56971411425142	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGCCTCAAGCCTGT	0	True	NA	16	True	AATAAA	-16	NA	64841914	64868002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64842029_64848592_64848743_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_47736.known	chr15	+	1477	6	FSM	ENSG00000166839.17	ENST00000496660.5	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	13.7549990912395	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTTGTGGCCTTTCTT	19	True	NA	13	True	AGTAAA	-24	NA	64911917	64932514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64911965_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486
transcript_47742.known	chr15	-	520	1	FSM	ENSG00000274383.1	ENST00000619654.1	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCCTCACAGGACTGG	1066	False	NA	0	True	AAAACA	-27	NA	64951435	64950915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64950900_64951400
transcript_47743.known	chr15	-	1613	9	FSM	ENSG00000090487.11	ENST00000433215.6	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	255.313410341094	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	-14	True	NA	-7	True	AATAAA	-12	NA	64989474	64963026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989405
transcript_47744.known	chr15	-	1799	9	FSM	ENSG00000090487.11	ENST00000204566.7	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	38.0441766240249	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTTTTGTGATTATTGT	-1	True	NA	-2	True	AATAAA	-17	NA	64989914	64963021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989664
transcript_47745.known	chr15	-	1533	8	FSM	ENSG00000090487.11	ENST00000416889.6	1533	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	264.167077619372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATTGGTTATTTTATGC	2	True	NA	41	True	NA	NA	NA	64989911	64963203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64980863_64981026_64983506_64983594_64989664
transcript_47747.nnic	chr15	-	1033	8	NNC	ENSG00000090487.11	novel	624	6	NA	NA	1	-5673	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	253.983608662819	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAGTCTACCCATTTG	-10	True	NA	-15	True	AATAAA	-29	NA	64989814	64968876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64969067_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989664
transcript_47748.known	chr15	-	2746	9	FSM	ENSG00000103707.10	ENST00000220058.9	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	29.0850047275224	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTGCAAACTCAT	-14	True	NA	-5	True	AATAAA	-13	NA	65029639	65001511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_47754.nnic	chr15	-	1009	7	NNC	ENSG00000103707.10	novel	2746	9	NA	NA	-4	68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	93.235812146764	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGAGATTATCTTTCC	-18	True	NA	-3	True	AATAAA	-22	NA	65029643	65002509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_65002693_65016452_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_47759.nic	chr15	-	1024	6	ISM	ENSG00000103707.10	ENST00000558460.5	1522	10	-27	13677	-4	0	5prime_fragment	FALSE	canonical	3	226	junction_1	14.0484874630688	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTATAGAGACCTTAGA	-18	True	NA	NA	False	TTTAAA	-1	NA	65029643	65016254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_47760.known	chr15	-	421	2	FSM	ENSG00000103707.10	ENST00000559633.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGCTTTCTGTAATAT	93	False	NA	NA	False	TATAAA	-33	NA	65029532	65026747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65027041_65029404
transcript_47761.known	chr15	+	589	1	FSM	ENSG00000270218.1	ENST00000604244.1	589	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAGCAAACATGTACAG	NA	False	NA	NA	False	NA	NA	NA	65026087	65026676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65026100_65026700
transcript_47762.known	chr15	-	1111	8	FSM	ENSG00000103707.10	ENST00000560717.5	1111	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	80.714412136437	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGGACTTTTTTTTT	-11	True	NA	-2	True	ATTAAA	-18	NA	65029598	65002995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65026817_65027041_65029404
transcript_47763.known	chr15	-	852	5	FSM	ENSG00000103707.10	ENST00000558614.1	852	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.581721902988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTATAGAGACCTTAGA	51	False	NA	NA	False	TTTAAA	-1	NA	65029574	65016254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65016528_65020196_65020273_65023671_65023795_65026830_65027041_65029404
transcript_47764.known	chr15	-	1707	6	FSM	ENSG00000246922.10	ENST00000559089.6	1707	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.44522215417857	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGCAGGCACCTGGTCT	-2	True	NA	NA	False	AATAAA	-20	NA	65115200	65092759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65093232_65094474_65094577_65099504_65099715_65102105_65102685_65106095_65106389_65115149
transcript_47765.known	chr15	-	7377	2	FSM	ENSG00000246922.10	ENST00000561387.1	7377	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAACAAAGTGATGCATAC	4685	False	NA	NA	False	ATTAAA	-11	NA	65101628	65093008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65093232_65094474
transcript_47766.known	chr15	-	2823	5	FSM	ENSG00000090470.15	ENST00000204549.9	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	12.4373429638327	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGCCTTTGCTGCCAA	-1	True	NA	0	True	AATAAA	-19	NA	65133808	65117378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65118841_65119375_65119464_65119717_65119955_65129031_65129171_65132911
transcript_47769.known	chr15	-	4695	14	FSM	ENSG00000166855.9	ENST00000300107.7	4695	14	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_8	30.1869912026658	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACGTGGTGGTGTGTCC	-11	True	NA	NA	False	AATAAA	-20	NA	65185342	65148218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_47773.nnic	chr15	+	1009	3	Antisense	novelGene_ENSG00000103742.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	2.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGATTCCTAACTTCC	NA	False	NA	NA	False	ATTAAA	-17	NA	65415441	65419569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_65415851_65416848_65416957_65419077
transcript_47786.nic	chr15	-	763	4	NIC	ENSG00000074603.19	novel	561	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	1.24721912892465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	18	False	65517712	1	True	AATAAA	-26	NA	65517694	65511960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_65512109_65512294_65512565_65515655_65515792_65517485
transcript_47787.known	chr15	-	561	3	FSM	ENSG00000074603.19	ENST00000560194.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	23.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	7	True	NA	1	True	AATAAA	-26	NA	65517628	65511960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65512109_65512294_65512565_65517485
transcript_47789.known	chr15	-	2822	18	FSM	ENSG00000074603.19	ENST00000358939.8	2822	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.5269605908662	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAGCACCATGTATTC	-5	True	NA	NA	False	ACTAAA	-18	NA	65517680	65446616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
transcript_47792.known	chr15	+	1824	11	FSM	ENSG00000074696.13	ENST00000568793.5	1824	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	653.047326003254	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAGTAAATCAACTATTT	3	True	NA	NA	False	AAGAAA	-37	NA	65530504	65577062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530644_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_47793.known	chr15	+	1658	11	FSM	ENSG00000074696.13	ENST00000566074.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	649.746111954508	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAACAACATCTATTATTA	131	False	NA	NA	False	GGGGCT	-33	NA	65530753	65576955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530834_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_47797.known	chr15	+	3228	11	FSM	ENSG00000074696.13	ENST00000261875.10	3228	11	0	0	0	0	multi-exon	TRUE	canonical	1	601	junction_6	426.511723168309	4519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGACTGTGCTTAAA	-39	True	NA	32	True	ATTAAA	-17	NA	65530462	65578349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_47798.known	chr15	+	393	2	FSM	ENSG00000074696.13	ENST00000566239.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	2182	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGAAGGAAAAAAAAAAAAA	22	False	NA	NA	False	TTTAAA	-35	NA	65530587	65551937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530719_65551675
transcript_47799.known	chr15	+	1465	12	FSM	ENSG00000074696.13	ENST00000565299.5	1465	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	753.022548585158	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTTCCCCAGTAAC	-12	True	NA	39	True	ATTAAA	-16	NA	65530489	65576499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530719_65535720_65535835_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_47803.known	chr15	-	2419	12	FSM	ENSG00000138614.16	ENST00000567744.5	2419	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	85.4956380889189	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCATTTTCAAGCTTCTG	14	True	NA	NA	False	NA	NA	NA	65611121	65579026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65610685
transcript_47804.known	chr15	-	2615	12	FSM	ENSG00000138614.16	ENST00000573314.5	2615	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	64.9954861751222	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGGTCTGTCTT	-1	True	NA	18	True	ACTAAA	-5	NA	65611136	65578752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610795
transcript_47809.known	chr15	-	1741	11	FSM	ENSG00000138614.16	ENST00000420799.7	1741	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	87.9027303330221	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTTGAATGACTGAT	1	True	NA	NA	False	NA	NA	NA	65611242	65579146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65611097
transcript_47812.known	chr15	-	2393	12	FSM	ENSG00000138614.16	ENST00000313182.7	2304	12	-114	25	-3	-22	multi-exon	FALSE	canonical	3	118	junction_11	55.8411264657034	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-2	True	NA	-11	True	AATAAA	-17	NA	65611245	65578781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
transcript_47815.known	chr15	+	635	5	FSM	ENSG00000103769.10	ENST00000567671.1	635	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	502.077185301224	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAACCACTGAAAACAAGC	11	True	NA	NA	False	NA	NA	NA	65870012	65887791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65870086_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_47821.known	chr15	+	4895	5	FSM	ENSG00000103769.10	ENST00000261890.7	4895	5	0	0	0	0	multi-exon	FALSE	canonical	3	1076	junction_4	77.9326632420579	8526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGTTTAATTTTTA	-6	True	NA	32	True	AATATA	-29	NA	65869490	65891989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_47822.known	chr15	+	3763	17	FSM	ENSG00000166938.13	ENST00000319194.9	3763	17	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	37.6583635298986	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	NA	False	NA	21	True	AATAAA	-18	NA	66293216	66333898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66293368_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_47824.known	chr15	+	3780	17	FSM	ENSG00000166938.13	ENST00000319212.9	3780	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	18.3591555837952	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	-8	True	NA	21	True	AATAAA	-18	NA	66293567	66333898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_47826.known	chr15	+	2399	12	FSM	ENSG00000166938.13	ENST00000564909.5	2399	12	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	16.6505155902599	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTCCTTGGTTTTT	20	True	NA	NA	False	AAAACA	-16	NA	66293595	66326561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830
transcript_47829.nic	chr15	+	1329	8	ISM	ENSG00000166938.13	ENST00000565281.5	2305	12	64	7700	-3	3677	5prime_fragment	FALSE	canonical	3	120	junction_6	15.6752762563945	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAAGATACTGGGATGTG	-11	True	NA	9	True	AATAAA	-20	NA	66293564	66318751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448
transcript_47840.known	chr15	-	1009	8	FSM	ENSG00000075131.10	ENST00000562124.5	1009	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	76.7460694998348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATATTACTGAAGCTAGA	-21	True	NA	-92	True	TTTAAA	-32	NA	66386724	66336980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66386606
transcript_47845.known	chr15	-	729	2	FSM	ENSG00000075131.10	ENST00000561773.1	729	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGATGTAATAAAAGACC	-4	True	NA	NA	False	NA	NA	NA	66386707	66379269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66379941_66386649
transcript_47850.known	chr15	-	1728	8	FSM	ENSG00000075131.10	ENST00000261881.9	1728	8	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	18.8593072350963	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGGCTTTATGGGAGG	15	True	NA	-2	True	AGTAAA	-18	NA	66356685	66336190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
transcript_47851.nnic	chr15	+	1785	7	NNC	ENSG00000169032.11	novel	1526	5	NA	NA	-12377	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	185.396347201221	325	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	3003	False	NA	18	True	AATAAA	-36	NA	66472504	66491544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_66472747_66481754_66481880_66484989_66485192_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_47854.nnic	chr15	-	929	3	Fusion	ENSG00000243404.2_ENSG00000174444.15	novel	569	6	NA	NA	-348	2	multi-exon	FALSE	canonical	0	0	junction_1	5268	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTGAGACGGA	5406	False	NA	NA	False	NA	NA	NA	66500166	66446452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_66446920_66499301_66499653_66500055
transcript_47858.known	chr15	-	1069	3	FSM	ENSG00000174446.13	ENST00000565465.1	1069	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	163	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATAAATTTATAAGTA	-8	True	NA	-30	True	NA	NA	NA	66497759	66493843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66494553_66495329_66495420_66497489
transcript_47860.known	chr15	-	574	2	FSM	ENSG00000174446.13	ENST00000566658.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTAGCATTGAGTAATA	13	True	NA	-93	True	NA	NA	NA	66497738	66494227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66494553_66497489
transcript_47861.known	chr15	-	1296	3	FSM	ENSG00000174446.13	ENST00000316634.6	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	14	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGCTGCTCTCGAACT	-11	True	NA	NA	False	AGTAAA	-20	NA	66497762	66493467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66494553_66495329_66495420_66497641
transcript_47862.known	chr15	-	794	2	FSM	ENSG00000174446.13	ENST00000307979.7	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACTTGAGACATCACT	-11	True	NA	-66	True	TATAAA	-24	NA	66497762	66493879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66494553_66497641
transcript_47865.known	chr15	+	3595	19	FSM	ENSG00000174442.12	ENST00000307897.10	3595	19	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_15	54.2646691779067	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTTAGACTAATTTT	8	True	NA	9	True	AATAAA	-19	NA	66505325	66550130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_47871.known	chr15	+	2206	18	FSM	ENSG00000174442.12	ENST00000535141.6	2206	18	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	138.421676603172	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAAGGGAGGAAGAT	5359	False	NA	NA	False	AAAACA	-22	NA	66504958	66548426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66505392_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_47882.known	chr15	-	2552	12	FSM	ENSG00000188501.11	ENST00000537670.5	2552	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	9.68853800090815	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGCATTTTTCTCA	17	True	NA	NA	False	GATAAA	-16	NA	66565964	66547467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66548606_66550040_66550105_66551661_66551862_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66565856
transcript_47924.known	chr15	-	2741	10	FSM	ENSG00000174444.15	ENST00000307961.11	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	8802	junction_7	641.677970078411	63523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCAGGTTCTTTAC	-5	True	NA	NA	False	ATTAAA	-17	NA	66504855	66498014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_47925.known	chr15	-	2003	8	FSM	ENSG00000174444.15	ENST00000567229.5	2003	8	0	0	0	0	multi-exon	FALSE	canonical	3	9520	junction_7	488.186983247449	39778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGGTGTGCTCTGT	4	True	NA	-23	True	AATAAA	-27	NA	66504846	66499319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501505_66501787_66501913_66502611_66503165_66503357_66503530_66504787
transcript_47926.known	chr15	-	1396	9	FSM	ENSG00000174444.15	ENST00000561775.5	1396	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3417.6249794265	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGATTATACAGGCAGT	0	True	NA	-49	True	AATAAA	-1	NA	66504827	66499345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502872_66503357_66503530_66504787
transcript_47927.known	chr15	+	3256	19	FSM	ENSG00000174442.12	ENST00000446801.6	3256	19	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	114.020533671639	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGGCATTTCTTG	5517	False	NA	77	True	AATAAA	-24	NA	66505116	66549487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_47928.known	chr15	-	593	2	FSM	ENSG00000174444.15	ENST00000566491.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	9520	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGATGATAATACGG	4	True	NA	NA	False	NA	NA	NA	66504846	66502995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66503530_66504787
transcript_47929.known	chr15	+	583	6	FSM	ENSG00000174442.12	ENST00000565960.1	583	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_5	288.528681416597	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTAAGTGTTTTGCTTCT	8	True	NA	NA	False	AAGAAA	-16	NA	66505325	66520657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518882_66518970_66520589
transcript_47931.known	chr15	+	3828	4	FSM	ENSG00000137834.15	ENST00000288840.10	3828	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	43.5226633171986	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGCTTAAAATAACTAACA	-6	True	NA	8	True	AATAAA	-16	NA	66702235	66782849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66704076_66711667_66711725_66716420_66716499_66780996
transcript_47933.known	chr15	+	6464	9	FSM	ENSG00000166949.17	ENST00000327367.9	6464	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.61769203083567	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGCCAGGAGCTCA	1	True	NA	15	True	AATAAA	-15	NA	67065601	67195169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67066361_67164894_67165089_67165252_67165385_67166778_67166854_67170553_67170605_67181240_67181454_67184726_67184865_67187364_67187510_67190412
transcript_47939.known	chr15	+	1822	7	FSM	ENSG00000103599.20	ENST00000629425.2	1822	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	3.85861230093007	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGATTTGTTTGCT	7	True	NA	NA	False	NA	NA	NA	67254847	67374168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67254948_67261271_67261395_67344062_67344192_67357344_67357422_67359846_67359886_67372110_67372663_67373366
transcript_47941.known	chr15	+	1000	6	FSM	ENSG00000103599.20	ENST00000512104.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.73563184232549	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGAATCTTTTATTTATT	6	True	NA	NA	False	AATAAA	-23	NA	67254799	67307224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67254948_67261271_67261395_67263121_67263217_67279394_67279513_67304338_67304456_67306825
transcript_47957.known	chr15	-	2251	10	FSM	ENSG00000103591.13	ENST00000561452.5	2251	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	149.07045314213	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACTGCAAATAAAAATCC	-20	True	NA	-53	True	TTTAAA	-13	NA	67254675	67201706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254413
transcript_47958.known	chr15	-	3132	10	FSM	ENSG00000103591.13	ENST00000261880.10	3132	10	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_3	66.4632080529623	1733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTGGTTTTTGGTTGT	-6	True	NA	NA	False	TTTAAA	-5	NA	67254661	67200666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
transcript_47977.nnic	chr15	-	419	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	0	3466	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	14	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	-35	True	NA	-2	True	AATAAA	-18	NA	67521662	67514919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_67515067_67518999_67519103_67521493
transcript_47978.nnic	chr15	-	409	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	-15	3466	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	13	69	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	NA	False	NA	-2	True	AATAAA	-18	NA	67521677	67514919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_67515067_67518999_67519103_67521518
transcript_47979.nnic	chr15	-	526	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	23	3466	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	7	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	NA	False	NA	-2	True	AATAAA	-18	NA	67521821	67514919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_67515067_67518999_67519103_67521545
transcript_47984.known	chr15	+	4193	2	FSM	ENSG00000189227.6	ENST00000342683.6	4193	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTGCAATGATTGAGG	1	True	NA	NA	False	AATAAA	-16	NA	67521130	67530146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67521595_67526417
transcript_47985.known	chr15	-	1533	1	FSM	ENSG00000270964.1	ENST00000604760.1	1533	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCCTCATGTACTTTT	NA	False	NA	NA	False	AATAAA	-10	NA	67542604	67541071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_67541100_67542600
transcript_47987.known	chr15	+	2344	22	FSM	ENSG00000137764.20	ENST00000178640.10	2344	22	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	9.55494909218228	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	-17	True	NA	20	True	AATAAA	-21	NA	67542702	67807114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_47988.known	chr15	+	1783	22	FSM	ENSG00000137764.20	ENST00000354498.9	1783	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.6008314251061	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTCTGCCATAAGAGT	-4	True	NA	17	True	AATAAA	-18	NA	67548997	67807111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67549208_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_47990.nnic	chr15	+	1464	14	NNC	ENSG00000137764.20	novel	412	3	NA	NA	-3664	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	21.2561164187417	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	NA	False	NA	20	True	AATAAA	-21	NA	67636888	67807114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_67637227_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_47996.known	chr15	+	7980	14	FSM	ENSG00000033800.14	ENST00000249636.11	7980	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	16.2600901763914	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGAAATCATCTATTAT	-3	True	NA	NA	False	AATAAA	-39	NA	68054314	68193847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541
transcript_48.known	ERCC-00109	+	520	1	FSM	ERCC-00109A	DQ854998	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00109_+_0_500
transcript_4800.known	chr1	+	5049	4	FSM	ENSG00000132763.15	ENST00000401061.9	5049	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.16024689946929	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCCAAGCTTTTCCATTA	-22	True	NA	NA	False	AATAAA	-17	NA	45500299	45513382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45500414_45507355_45507551_45508211_45508365_45508795
transcript_48004.nic	chr15	+	1359	2	ISM	ENSG00000033800.14	ENST00000564915.5	671	5	-15	54732	-15	-54732	5prime_fragment	FALSE	canonical	3	182	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAAGAAACAAAAACAAAG	106	False	NA	NA	False	AAGAAA	-37	NA	68054293	68087607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_68054351_68086305
transcript_48005.known	chr15	-	3857	5	FSM	ENSG00000129007.16	ENST00000467889.3	3857	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	32.2364312540951	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATAGCTATTTTATCA	-3	True	NA	NA	False	ATTAAA	-20	NA	68205332	68190704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439_68197629_68199540_68199682_68205120_68205152_68205244
transcript_48006.known	chr15	-	2520	4	FSM	ENSG00000129007.16	ENST00000448060.7	2520	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	39.2031744746377	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTCTATGTCTATA	8851	False	NA	0	True	AATAAA	-18	NA	68205488	68192056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439_68197629_68205120_68205152_68205244
transcript_48007.known	chr15	-	3651	3	FSM	ENSG00000129007.16	ENST00000540479.6	3651	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	44.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATAGCTATTTTATCA	-4	True	NA	NA	False	ATTAAA	-20	NA	68205298	68190704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439_68197629_68205244
transcript_48008.known	chr15	-	620	2	FSM	ENSG00000129007.16	ENST00000467188.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCGTGAGTCCGGCCC	8305	False	NA	-3	True	AATAAA	-21	NA	68197750	68193803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439
transcript_48010.known	chr15	+	7177	2	FSM	ENSG00000169018.6	ENST00000306917.5	7177	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTTGAGGTTTGTGTCT	-22	True	NA	29	True	AGTAAA	-14	NA	68277744	68295862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_68278666_68289606
transcript_48011.nnic	chr15	-	362	2	NIC	ENSG00000260657.2	novel	396	3	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTGCTTTGGGGTTTGT	NA	False	NA	-2	True	AATAAA	-19	NA	68278044	68267791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_68267954_68277844
transcript_48012.known	chr15	-	396	3	FSM	ENSG00000260657.2	ENST00000563057.1	396	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTGCTTTGGGGTTTGT	NA	False	NA	-2	True	AATAAA	-19	NA	68277994	68267791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68267954_68275033_68275118_68277844
transcript_48025.known	chr15	-	2440	7	FSM	ENSG00000140350.15	ENST00000465139.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_4	227.435705200393	5722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGGTTTACATATGGT	0	True	NA	-11	True	TATAAA	-18	NA	68820895	68778534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
transcript_48026.known	chr15	-	2001	7	FSM	ENSG00000140350.15	ENST00000409628.6	2001	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1100.89974566261	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGGGATGGCTTCT	-1	True	NA	-6	True	AATAAA	-14	NA	68820868	68778906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787496_68787769_68787920_68820697
transcript_48027.known	chr15	-	724	5	FSM	ENSG00000140350.15	ENST00000560303.1	724	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1279.79693213416	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTGGTGGTATGGCAGC	9	True	NA	NA	False	NA	NA	NA	68820886	68780419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68780471_68784384_68784596_68787412_68787536_68787769_68787920_68820697
transcript_48029.nnic	chr15	-	573	3	Antisense	novelGene_ENSG00000259222.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTTCAAAGTTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	69091801	69077617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_-_69077883_69091238_69091315_69091569
transcript_48033.known	chr15	+	5044	5	FSM	ENSG00000138604.10	ENST00000261858.7	5044	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	10.6183802907977	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	0	True	NA	NA	False	AATAAA	-20	NA	69160634	69272207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69160758_69210315_69210407_69255793_69256393_69261086_69261330_69268219
transcript_48036.known	chr15	+	1308	3	FSM	ENSG00000138604.10	ENST00000559798.2	1308	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	3	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATAATATAATGATTTA	5	True	NA	79	True	AATAAA	-16	NA	69160583	69197458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69160758_69194435_69194526_69196414
transcript_48038.nnic	chr15	+	1209	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-43	-52	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	0	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGTTTC	-38	True	NA	27	True	AATAAA	-26	NA	69160540	69197406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_69160758_69196414
transcript_48039.nnic	chr15	+	1262	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-43	1	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAATATAATGATTTAA	-38	True	NA	80	True	AATAAA	-17	NA	69160540	69197459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_69160758_69196414
transcript_48042.known	chr15	+	5372	9	FSM	ENSG00000137819.14	ENST00000395407.7	5372	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	14.8991400758567	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCCACTGTCCTAGG	-17	True	NA	NA	False	AGTAAA	-34	NA	69298911	69407780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69299057_69337340_69337502_69359965_69360132_69379882_69380011_69384676_69384883_69389653_69389781_69397467_69397565_69399973_69400116_69403580
transcript_48055.known	chr15	+	3660	24	FSM	ENSG00000137807.16	ENST00000679126.1	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	103.833333080476	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	11	True	NA	NA	False	ATTAAA	-21	NA	69414348	69448425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_48058.known	chr15	+	3620	23	FSM	ENSG00000137807.16	ENST00000647715.1	3620	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	65.6677084561681	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	11	True	NA	NA	False	ATTAAA	-23	NA	69414348	69448427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_48060.known	chr15	+	3351	22	FSM	ENSG00000137807.16	ENST00000352331.8	3351	22	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_17	55.4347075641343	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	13	False	NA	NA	False	ATTAAA	-21	NA	69414303	69448425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_48067.known	chr15	+	3723	23	FSM	ENSG00000137807.16	ENST00000260363.9	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_17	65.6677084561681	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	NA	False	NA	NA	False	ATTAAA	-23	NA	69414245	69448427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_48071.known	chr15	+	565	4	FSM	ENSG00000137807.16	ENST00000560042.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	33.9836562024878	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTAATGCAGTGAAGAAA	1	True	NA	NA	False	NA	NA	NA	69414380	69421916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646
transcript_48073.known	chr15	-	505	2	FSM	ENSG00000259426.6	ENST00000558107.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAAAGCTTATGGTCTG	-9	True	NA	NA	False	NA	NA	NA	69414220	69403844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_69404281_69414151
transcript_48074.known	chr15	+	532	4	FSM	ENSG00000137807.16	ENST00000560125.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	9.20144916122817	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTAATTGGGGTCTTGC	NA	False	NA	NA	False	NA	NA	NA	69444754	69446950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69445042_69446008_69446092_69446282_69446365_69446870
transcript_48077.known	chr15	+	1174	4	FSM	ENSG00000137818.12	ENST00000260379.11	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	20717	junction_3	1695.3651196391	245230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGCCAGGCACATGAA	-4	True	NA	78	True	AATAAA	-31	NA	69452817	69456205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69453021_69453646_69453722_69455169_69455288_69455427
transcript_4808.known	chr1	-	945	6	FSM	ENSG00000117450.15	ENST00000319248.13	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	7805	junction_5	167.765789122813	114087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGAGTCTTTATTTT	1	True	NA	-35	True	ATTAAA	-13	NA	45521884	45511050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
transcript_4809.known	chr1	+	1510	5	FSM	ENSG00000132763.15	ENST00000616135.1	1510	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.34428877022476	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACAAACTACAAAAGATT	19	True	NA	31	True	AATAAA	-28	NA	45500340	45511065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45500414_45507355_45507551_45508211_45508365_45508795_45509348_45510528
transcript_4810.known	chr1	-	609	5	FSM	ENSG00000117450.15	ENST00000372079.1	609	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3504.69480661298	3324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGAGTCTTTATTTT	3322	False	NA	-35	True	ATTAAA	-13	NA	45521854	45511050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514896_45518989_45519055_45521828
transcript_48115.known	chr15	+	256	2	FSM	ENSG00000137818.12	ENST00000560274.1	256	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	2	False	NA	50	True	AATAAA	-14	NA	69452883	69455546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69453021_69455427
transcript_48116.known	chr15	+	1962	3	FSM	ENSG00000137818.12	ENST00000487304.6	1962	3	0	0	0	0	multi-exon	FALSE	canonical	3	20717	junction_2	1435.5	7209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	-3	True	NA	50	True	AATAAA	-14	NA	69452818	69455546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69453021_69453646_69455288_69455427
transcript_48117.known	chr15	+	445	3	FSM	ENSG00000137818.12	ENST00000357790.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	1029	junction_1	9844	14488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCTTGTCCATA	-8	True	NA	51	True	AATAAA	-15	NA	69452813	69455547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69453021_69455169_69455288_69455427
transcript_48121.known	chr15	-	6904	19	FSM	ENSG00000137831.15	ENST00000322954.11	6904	19	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_10	28.0123429585012	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAAATCTTTAATATT	-4	True	NA	NA	False	AATAAA	-22	NA	70763558	70654553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70657128_70660150_70660217_70664661_70664815_70666723_70669463_70671038_70671092_70671964_70672002_70676492_70676592_70677107_70677141_70678098_70678207_70679607_70679677_70682757_70682796_70684264_70684447_70687539_70687647_70687749_70687821_70690453_70690512_70691298_70691364_70695016_70695106_70699526_70699661_70763329
transcript_48134.known	chr15	+	6176	16	FSM	ENSG00000137821.12	ENST00000260382.10	6176	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	11.5727649630021	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATAGTGTACTTGCGG	-17	True	NA	NA	False	AATAAA	-22	NA	70892825	71053658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_70892943_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_48141.known	chr15	+	602	6	FSM	ENSG00000137821.12	ENST00000558546.5	602	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	22.9381777829016	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATCAGGTATTGTAAAG	0	True	NA	NA	False	AAAAAG	-23	NA	70853377	70911589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_70853470_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531
transcript_48143.nnic	chr15	+	1022	3	NNC	ENSG00000137821.12	novel	557	3	NA	NA	-20	-25801	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATCCCTAAAGTTCCAT	NA	False	NA	NA	False	AATAAA	-12	NA	70853357	70875150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_70853470_70872907_70873224_70874556
transcript_48144.nic	chr15	+	370	3	ISM	ENSG00000137821.12	ENST00000560755.5	398	5	-22	4909	0	-4907	5prime_fragment	FALSE	canonical	3	67	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCATTGGGACCAAATT	-17	True	NA	NA	False	AATAAA	-19	NA	70892825	70896044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_70892943_70893583_70893641_70895848
transcript_48145.known	chr15	-	4467	3	FSM	ENSG00000166173.11	ENST00000299213.10	4467	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTATGGGCCAGGCAT	9	True	NA	NA	False	AATAAA	-17	NA	70854157	70829129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70833117_70836294_70836506_70853888
transcript_48147.known	chr15	-	473	2	FSM	ENSG00000166173.11	ENST00000560052.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGATCATCTCCCCA	1221	False	NA	-3	True	AATAAA	-36	NA	70853525	70851426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70851721_70853346
transcript_48148.known	chr15	-	527	2	FSM	ENSG00000166173.11	ENST00000344870.4	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGATCATCTCCCCA	625	False	NA	-3	True	AATAAA	-36	NA	70854121	70851426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70851721_70853888
transcript_48149.known	chr15	-	2047	3	FSM	ENSG00000129028.9	ENST00000249861.9	2047	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAGCCTGAACAATGA	-21	True	NA	-15	True	AATAAA	-18	NA	70892433	70881341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70882651_70882760_70882909_70891843
transcript_48150.known	chr15	-	537	3	FSM	ENSG00000129028.9	ENST00000560604.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCAACACAATGAAGATAAT	2	True	NA	NA	False	NA	NA	NA	70892410	70882299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70882651_70882760_70882909_70892372
transcript_48155.known	chr15	-	555	1	FSM	ENSG00000212664.5	ENST00000498103.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11515	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	71341712	71341157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_71341200_71341700
transcript_48159.known	chr15	-	4784	19	FSM	ENSG00000066933.16	ENST00000561618.5	4784	19	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_18	8.6139780173826	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACCGTGATTGTTTCC	100	False	NA	NA	False	AAAACA	-30	NA	71898838	71825991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_71827044_71827883_71828027_71830108_71830312_71848844_71848969_71850035_71850168_71851252_71851359_71852131_71852261_71854376_71854570_71859734_71859797_71862499_71862612_71875790_71875839_71878039_71878232_71879720_71879838_71880334_71880559_71883593_71883737_71888003_71888117_71892964_71893178_71893678_71893779_71897460
transcript_48161.known	chr15	+	4178	2	FSM	ENSG00000166192.15	ENST00000340912.6	4178	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCTCCATCTCGTCTC	-6	True	NA	NA	False	AATAAA	-17	NA	72118402	72143692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72118465_72139576
transcript_48163.known	chr15	-	3284	12	FSM	ENSG00000175318.12	ENST00000309731.12	3284	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	4.61760912698193	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGGTATAGAAAGTTCAT	1	True	NA	0	True	AATAAA	-22	NA	72197787	72159805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72162013_72162272_72162378_72163265_72163477_72163612_72163758_72165353_72165411_72166631_72166704_72166993_72167093_72167735_72167840_72168490_72168567_72168938_72168997_72169846_72169940_72197730
transcript_48177.known	chr15	-	2305	11	FSM	ENSG00000067225.20	ENST00000335181.10	2305	11	0	0	0	0	multi-exon	FALSE	canonical	2	6951	junction_5	1806.36751520835	23398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	10	True	NA	-5	True	AATAAA	-17	NA	72231190	72199028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
transcript_48178.known	chr15	-	1355	9	FSM	ENSG00000067225.20	ENST00000569857.5	1355	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4211.86323822367	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCGCCGTGGGTGCC	6318	False	NA	NA	False	NA	NA	NA	72231225	72202532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72202621_72206727_72206881_72207126_72207278_72208616_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
transcript_48183.nic	chr15	-	705	5	ISM	ENSG00000137817.17	ENST00000567974.5	1950	20	16586	-17	921	0	3prime_fragment	FALSE	canonical	3	19	junction_4	82.924664605894	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGATCACTGTGGTTTGA	NA	False	NA	-7	True	AATAAA	-30	NA	72249344	72241181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72249244
transcript_48184.known	chr15	-	3657	4	FSM	ENSG00000137817.17	ENST00000566991.5	3657	4	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	14.3836326735943	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACAATAAAATGGA	NA	False	NA	-43	True	NA	NA	NA	72245787	72241217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619
transcript_48186.known	chr15	-	4785	14	FSM	ENSG00000213614.11	ENST00000268097.10	4785	14	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_6	37.7420394051718	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTCTAGCCGAGCCACC	-28	True	NA	-12	True	AATAAA	-28	NA	72376014	72340923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_48187.known	chr15	-	1987	12	FSM	ENSG00000213614.11	ENST00000684125.1	1987	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	115.665876736928	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATATTGTTCTCTAGGC	-17	True	NA	-34	True	TTTAAA	-10	NA	72376003	72343453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_48188.known	chr15	-	1743	13	FSM	ENSG00000213614.11	ENST00000567411.5	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	107.288422281044	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGCATTTTTCTATAAT	-17	True	NA	-52	True	AATAAA	-6	NA	72376003	72343907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72355558_72355625_72356524_72356618_72375719
transcript_48189.known	chr15	-	1892	15	FSM	ENSG00000213614.11	ENST00000683681.1	1892	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	132.020406585884	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATGTGGCATTTTTCTA	-23	True	NA	-56	True	AATAAA	-2	NA	72376009	72343911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72344141_72345445_72345551_72345676_72345777_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_48190.known	chr15	-	1582	13	FSM	ENSG00000213614.11	ENST00000567159.5	1582	13	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_5	38.7230192808131	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGATCCAGGGCTGGGG	-7	True	NA	NA	False	NA	NA	NA	72375993	72345410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_48191.known	chr15	-	2390	11	FSM	ENSG00000213614.11	ENST00000684415.1	2390	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.818061058285	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATAACAACTATTTACATA	-17	True	NA	-12	True	AATAAA	-8	NA	72376003	72345240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72346326_72346526_72346711_72348030_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_48192.known	chr15	-	1000	2	FSM	ENSG00000213614.11	ENST00000567213.2	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGAGATGCCTTTCCT	-3	True	NA	NA	False	AATAAA	-23	NA	72375989	72369958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72370689_72375719
transcript_48195.known	chr15	+	21679	14	FSM	ENSG00000166233.15	ENST00000379887.9	21679	14	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	20.7333022571226	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGGTCCCTTTTGTTGA	5	True	NA	NA	False	GATAAA	-6	NA	72474329	72602987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72475015_72518066_72518135_72544819_72544965_72555270_72555364_72555851_72555908_72561482_72561550_72563393_72563501_72566562_72566606_72567105_72567178_72570176_72570308_72572107_72572166_72580730_72580992_72582074_72582188_72583207
transcript_48204.nic	chr15	+	864	2	ISM	ENSG00000166233.15	ENST00000570085.5	807	5	395	42747	-51	-26123	5prime_fragment	FALSE	canonical	3	157	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCTTGCTCACAAA	518	False	NA	NA	False	NA	NA	NA	72474884	72518800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_72475015_72518066
transcript_48206.known	chr15	-	513	3	FSM	ENSG00000259783.6	ENST00000565305.6	513	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCACTTGTTTCTTCTG	NA	False	NA	NA	False	AAGAAA	-27	NA	72636956	72608480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72608754_72633337_72633407_72636785
transcript_48208.known	chr15	+	1864	16	FSM	ENSG00000140463.14	ENST00000562084.5	1864	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	83.6799192691346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGAGAGAAATAAGAA	8	True	NA	NA	False	NA	NA	NA	72686219	72737570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72686565_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_48212.known	chr15	+	2055	15	FSM	ENSG00000140463.14	ENST00000566400.5	2055	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	110.674670331839	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAGAAAAAAAACAA	-3	True	NA	3	True	NA	NA	NA	72686185	72738087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72686252_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722788_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_48221.known	chr15	+	2467	16	FSM	ENSG00000140463.14	ENST00000268057.9	2467	16	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_6	28.4250280953638	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	-5	True	NA	15	True	AATAAA	-17	NA	72686206	72738473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_48222.known	chr15	-	2716	7	FSM	ENSG00000159322.18	ENST00000567941.5	2716	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	86.0982965375429	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTCTGTAATTGATT	3	True	NA	-12	True	ATTAAA	-19	NA	72783731	72751368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72752893_72755555_72755655_72756250_72756448_72760406_72760528_72771782_72771846_72774871_72775098_72783245
transcript_48228.known	chr15	-	2817	8	FSM	ENSG00000156642.17	ENST00000351217.10	2817	8	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	89.5001995209269	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATAATACTCTTTATT	NA	False	NA	-13	True	AATAAA	-17	NA	73634134	73560013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73633124
transcript_48229.known	chr15	-	2420	9	FSM	ENSG00000156642.17	ENST00000345330.9	2420	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	469.660249542156	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATAATACTCTTTATT	-18	True	NA	-13	True	AATAAA	-17	NA	73633389	73560013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73597021_73597370_73633124
transcript_48232.known	chr15	-	1094	8	FSM	ENSG00000156642.17	ENST00000562924.5	1094	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	394.745074028021	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTTTTTTTTTCCTT	0	True	NA	NA	False	NA	NA	NA	73633243	73560833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73561049_73561895_73561971_73563235_73563246_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73633124
transcript_48238.known	chr15	-	858	6	FSM	ENSG00000156642.17	ENST00000565325.5	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	428.590900510032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTTAAAATATTTAAAT	-2	True	NA	NA	False	NA	NA	NA	73633245	73560816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73633124
transcript_48239.known	chr15	+	3295	10	FSM	ENSG00000103855.18	ENST00000318443.10	3295	10	0	0	0	0	multi-exon	TRUE	canonical	3	636	junction_1	109.778677459201	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	-14	True	NA	18	True	AATAAA	-15	NA	73684382	73714514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_48240.known	chr15	+	2181	10	FSM	ENSG00000103855.18	ENST00000560928.5	2181	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	282.097697812497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGTGAAGACAGGGCAC	1	True	NA	NA	False	NA	NA	NA	73684437	73713580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73684461_73699585_73699719_73702379_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_48242.known	chr15	+	1620	2	FSM	ENSG00000103855.18	ENST00000559465.1	1620	2	0	0	0	0	multi-exon	FALSE	canonical	3	855	junction_1	0	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	2784	False	NA	18	True	AATAAA	-15	NA	73711131	73714514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73711171_73712933
transcript_48247.nnic	chr15	+	1377	4	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	NA	False	NA	44	True	NA	NA	NA	73752290	73770489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_73752397_73767788_73767882_73768752_73768911_73769469
transcript_48254.nnic	chr15	+	1283	3	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	NA	False	NA	44	True	NA	NA	NA	73752291	73770489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_73752397_73768752_73768911_73769469
transcript_48255.nnic	chr15	+	1407	3	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	73752291	73770613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_73752397_73768752_73768911_73769469
transcript_48256.known	chr15	-	779	3	FSM	ENSG00000205363.7	ENST00000559817.1	779	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGAGAGGGTGCGGTT	955	False	NA	NA	False	NA	NA	NA	73752378	73740255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73740643_73750974_73751098_73752109
transcript_48257.known	chr15	-	7150	3	FSM	ENSG00000205363.7	ENST00000569673.3	7150	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGAGCCCCATTTGCAG	-18	True	NA	-36	True	AATAAA	-16	NA	73753351	73735457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73740643_73750974_73751698_73752109
transcript_48258.known	chr15	+	1224	2	FSM	ENSG00000260469.3	ENST00000615095.1	1224	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	73752316	73770613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73752397_73769469
transcript_48261.nnic	chr15	+	1251	2	NIC	ENSG00000260469.3	novel	1193	3	NA	NA	-166	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	NA	False	NA	44	True	NA	NA	NA	73767955	73770489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_73768187_73769469
transcript_48262.nnic	chr15	+	1375	2	NIC	ENSG00000260469.3	novel	1193	3	NA	NA	-166	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	NA	False	NA	NA	False	ACTAAA	-16	NA	73767955	73770613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_73768187_73769469
transcript_48263.known	chr15	+	2346	7	FSM	ENSG00000129038.16	ENST00000261921.8	2346	7	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_2	14.4990421139544	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGCTCTGCATGCGG	2	True	NA	11	True	AATAAA	-15	NA	73926461	73952136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73927886_73942853_73942963_73946416_73946555_73947066_73947224_73947806_73947903_73949458_73949575_73951830
transcript_48270.known	chr15	-	765	4	FSM	ENSG00000261801.7	ENST00000568229.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.96655480858378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATTTGACAGCCCCACA	-13	True	NA	NA	False	NA	NA	NA	73926331	73908195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73908549_73912184_73912304_73919837_73920039_73926239
transcript_48273.known	chr15	-	533	3	FSM	ENSG00000261801.7	ENST00000562130.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATCAAGAAATAGGACAT	-24	True	NA	NA	False	NA	NA	NA	73926342	73919154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73919384_73919837_73920039_73926239
transcript_48274.known	chr15	-	3429	3	FSM	ENSG00000261801.7	ENST00000562739.6	3429	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACACCTGGATTCCTG	9	True	NA	-63	True	NA	NA	NA	73927697	73916199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73919384_73919837_73920039_73927653
transcript_48275.nic	chr15	-	604	3	NIC	ENSG00000261801.7	novel	701	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTTTTGGGGTAATTTG	-14	True	NA	-1	True	AATAAA	-18	NA	73926332	73916137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_73916448_73919837_73920039_73926239
transcript_48281.known	chr15	-	6280	7	FSM	ENSG00000067221.14	ENST00000541638.6	6280	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.13160143944688	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTCTTTGTTTGGACA	-3	True	NA	NA	False	AATAAA	-20	NA	73992295	73978925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_48282.known	chr15	-	1833	7	FSM	ENSG00000067221.14	ENST00000561656.5	1833	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	7.71902411793961	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGTTTACAATGTATA	NA	False	NA	-29	True	AATAAA	-1	NA	73994622	73983236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73994550
transcript_48283.known	chr15	-	1891	6	FSM	ENSG00000067221.14	ENST00000316911.10	1891	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	7.2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	2237	False	NA	-10	True	AATAAA	-20	NA	73992348	73983217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_48285.nnic	chr15	-	835	5	NNC	ENSG00000067221.14	novel	539	5	NA	NA	-8	645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.88590514779375	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAACTTGTGCTTCCTCTT	2259	False	NA	NA	False	AATAAA	-34	NA	73992326	73988008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_73988147_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_48288.known	chr15	+	1985	7	FSM	ENSG00000140464.20	ENST00000564428.5	1985	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	38.9657969677682	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	8	True	NA	14	True	AATAAA	-14	NA	73994743	74043338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988
transcript_48289.known	chr15	+	2199	8	FSM	ENSG00000140464.20	ENST00000395135.7	2199	8	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_7	34.6651621860876	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGTGCCTGAGTGTGCG	0	True	NA	13	True	AATAAA	-13	NA	73994672	74043337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033415_74034477_74034531_74042988
transcript_48290.known	chr15	-	3176	18	FSM	ENSG00000159289.6	ENST00000290438.3	3176	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.45283400414453	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAGGTATTTAGTGAA	-1	False	NA	NA	False	NA	NA	NA	74082550	74069856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74071038_74071123_74071278_74071366_74071471_74071553_74071657_74072217_74072310_74072741_74072818_74074147_74074217_74074492_74075002_74075402_74075491_74075682_74075791_74075898_74075986_74077017_74077125_74077220_74077303_74077402_74077454_74077714_74077754_74078608_74078690_74080615_74080736_74082425
transcript_48292.known	chr15	+	1346	5	FSM	ENSG00000140481.15	ENST00000560148.5	1346	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	NA	False	NA	6	True	AATAAA	-18	NA	74202704	74221557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74218496_74218862_74221249
transcript_48294.known	chr15	+	820	4	FSM	ENSG00000140481.15	ENST00000561332.1	820	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCGAGTCGGGTGTAT	25	False	NA	NA	False	NA	NA	NA	74203049	74212973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74212481
transcript_48296.known	chr15	+	589	4	FSM	ENSG00000140481.15	ENST00000558645.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGGTCCTTGTTCTGA	-15	True	NA	NA	False	CATAAA	-21	NA	74203009	74213488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74213267
transcript_48299.nnic	chr15	+	1081	4	NIC	ENSG00000140481.15	novel	1346	5	NA	NA	133	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	1.24721912892465	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	NA	False	NA	6	True	AATAAA	-18	NA	74202837	74221557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_74203099_74209387_74209535_74218496_74218862_74221249
transcript_48300.nic	chr15	+	1067	3	ISM	ENSG00000140481.15	ENST00000561332.1	820	4	-51	8	-11	-8	intron_retention	FALSE	canonical	2	2	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTGGGAGGCCGAGTC	4	True	NA	NA	False	NA	NA	NA	74202998	74212965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_74203099_74209387_74209535_74212145
transcript_48304.known	chr15	-	2565	19	FSM	ENSG00000137868.19	ENST00000563965.5	2565	19	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_18	17.7239636901256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAGGTCCTCCGGATCA	5	True	NA	NA	False	NA	NA	NA	74202858	74179974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202417
transcript_48305.known	chr15	-	2708	19	FSM	ENSG00000137868.19	ENST00000395105.9	2708	19	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	12.2075669712693	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-18	True	NA	-10	True	AATAAA	-16	NA	74202787	74179465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_48306.known	chr15	-	2864	19	FSM	ENSG00000137868.19	ENST00000323940.9	2864	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_18	18.5738432835261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-1	True	NA	-10	True	AATAAA	-16	NA	74209030	74179465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_48311.nic	chr15	-	1789	6	NIC	ENSG00000137868.19	novel	1889	6	NA	NA	-4	0	intron_retention	FALSE	canonical	3	63	junction_2	10.6695829346793	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	-22	True	NA	NA	False	AATAAA	-20	NA	74202791	74194386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_48312.known	chr15	-	1889	6	FSM	ENSG00000137868.19	ENST00000432245.6	1889	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	30.009331881933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	3280	False	NA	NA	False	AATAAA	-20	NA	74208978	74194386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_48317.known	chr15	-	612	2	FSM	ENSG00000277749.1	ENST00000611006.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTAAACTGCATGT	5	True	NA	-16	True	AATAAA	-15	NA	74319688	74311515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74311959_74319519
transcript_48322.known	chr15	-	2001	9	FSM	ENSG00000140459.18	ENST00000358632.8	2001	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	9.00607433902252	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCGTTCCATCAGAC	-6	True	NA	-18	True	AATAAA	-17	NA	74366206	74337758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74365715
transcript_48324.nnic	chr15	-	1671	8	NIC	ENSG00000140459.18	novel	2001	9	NA	NA	79	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	16.6537364809075	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTGCGTTCCATCA	3160	False	NA	-21	True	AATAAA	-14	NA	74366079	74337761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74347899_74348056_74365715
transcript_48326.nnic	chr15	-	1148	5	NIC	ENSG00000140459.18	novel	2001	9	NA	NA	81	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	21.0757562141908	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTGCGTTCCATCA	3162	False	NA	-21	True	AATAAA	-14	NA	74366077	74337761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74365715
transcript_48327.known	chr15	+	915	4	FSM	ENSG00000260266.1	ENST00000564109.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6.23609564462324	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTGGTGGATGGCAA	11	False	NA	NA	False	AATACA	-33	NA	74350767	74361903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74350940_74354525_74354686_74356282_74356476_74361513
transcript_48329.nic	chr15	+	1174	3	ISM	ENSG00000260266.1	ENST00000564109.1	915	4	3662	-335	-26	197	3prime_fragment	FALSE	canonical	2	3	junction_2	7.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTATAACCAATGCTTG	3630	False	NA	NA	False	AATAAA	-21	NA	74354429	74362238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_74354686_74356282_74356476_74361513
transcript_48330.known	chr15	+	3337	2	FSM	ENSG00000260266.1	ENST00000562009.1	3337	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTGCATTTTGTC	3656	False	NA	14	True	AATAAA	-20	NA	74354455	74364620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74354686_74361513
transcript_48336.known	chr15	-	1477	12	FSM	ENSG00000138629.16	ENST00000564488.5	1477	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	252.587796699133	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTCCAGTTCTTG	35	True	NA	-7	True	AATATA	-17	NA	74461118	74445977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461036
transcript_48341.known	chr15	-	1720	11	FSM	ENSG00000138629.16	ENST00000567435.5	1720	11	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_10	186.135864357195	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	51	False	NA	-6	True	AATATA	-18	NA	74461102	74445976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667
transcript_4835.known	chr1	+	775	3	FSM	ENSG00000117448.14	ENST00000496999.5	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	608.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGCAGTCTCACATG	13	True	NA	NA	False	NA	NA	NA	45550845	45567213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45551156_45566568_45566689_45566868
transcript_4836.known	chr1	+	1407	9	FSM	ENSG00000117448.14	ENST00000351829.9	1407	9	0	0	0	0	multi-exon	FALSE	canonical	3	916	junction_1	211.735684285857	3864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	-7	True	NA	27	True	AATAAA	-17	NA	45550825	45570049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_48362.known	chr15	-	1409	11	FSM	ENSG00000138629.16	ENST00000395081.7	1409	11	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_10	117.606802524344	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-7	True	NA	-6	True	AATATA	-18	NA	74461160	74445976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_48363.known	chr15	-	1360	11	FSM	ENSG00000138629.16	ENST00000361351.8	1360	11	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_10	135.672583818545	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-29	True	NA	-6	True	AATATA	-18	NA	74461182	74445976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_48364.known	chr15	-	458	3	FSM	ENSG00000138629.16	ENST00000565494.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	313.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	2218	False	NA	-6	True	AATATA	-18	NA	74449311	74445976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448559_74449185
transcript_48368.nnic	chr15	+	1542	5	NNC	ENSG00000247240.9	novel	1347	4	NA	NA	11	0	intron_retention	FALSE	canonical	1	4	junction_1	22.0609949911603	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	11	False	NA	13	True	AATAAA	-18	NA	74461275	74481288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74462028_74465036_74465275_74466035_74466131_74479059_74479279_74481050
transcript_4837.known	chr1	+	1360	10	FSM	ENSG00000117448.14	ENST00000621846.4	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	383.652910265979	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTTGCTTGTCTTAT	NA	False	NA	26	True	AATAAA	-16	NA	45550782	45570048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_48373.known	chr15	+	1333	4	FSM	ENSG00000247240.9	ENST00000499217.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	17.1529071070248	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCATTTTCATCCATTC	0	True	NA	27	True	AATAAA	-32	NA	74461264	74481302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462032_74466035_74466131_74479059_74479279_74481050
transcript_48375.nnic	chr15	+	1184	4	NNC	ENSG00000247240.9	novel	1347	4	NA	NA	0	0	intron_retention	FALSE	canonical	2	4	junction_3	22.9927524813074	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	0	True	NA	13	True	AATAAA	-18	NA	74461264	74481288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74462028_74466035_74466131_74479059_74479148_74481050
transcript_48376.known	chr15	+	1296	4	FSM	ENSG00000247240.9	ENST00000657781.2	1347	4	31	20	14	-5	multi-exon	FALSE	canonical	3	21	junction_1	15.5205956357638	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGTTTCCCTGTCA	14	False	NA	8	True	AATAAA	-13	NA	74461278	74481283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462028_74466035_74466131_74479059_74479279_74481050
transcript_48378.known	chr15	+	1344	4	FSM	ENSG00000247240.9	ENST00000666989.2	1391	4	42	5	0	0	multi-exon	FALSE	canonical	3	34	junction_1	10.8012344973464	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	6	True	NA	13	True	AATAAA	-18	NA	74461306	74481288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74481050
transcript_4838.known	chr1	+	667	5	FSM	ENSG00000117448.14	ENST00000497973.5	667	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	538.503017633142	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	2113	False	NA	27	True	AATAAA	-17	NA	45566868	45570049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45567021_45567981_45568178_45568926_45569000_45569142_45569230_45569890
transcript_48386.nnic	chr15	+	894	3	NNC	ENSG00000247240.9	novel	1347	4	NA	NA	0	1	intron_retention	FALSE	canonical	1	1	junction_2	10	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCTGTCATGGTCATTT	0	True	NA	17	True	AATAAA	-22	NA	74461264	74481292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74462028_74466035_74466083_74481208
transcript_48388.nnic	chr15	+	1216	3	FSM	ENSG00000247240.9	ENST00000691484.1	1187	3	-29	0	4	0	multi-exon	FALSE	canonical	2	7	junction_1	16	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	4	True	NA	13	True	AATAAA	-18	NA	74461268	74481288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462028_74479059_74479279_74481050
transcript_4839.known	chr1	+	948	4	FSM	ENSG00000117448.14	ENST00000473038.5	948	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	609.184336269044	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	2793	False	NA	27	True	AATAAA	-17	NA	45567548	45570049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45568178_45568926_45569000_45569142_45569230_45569890
transcript_48391.known	chr15	+	1251	3	FSM	ENSG00000247240.9	ENST00000659591.2	1300	3	45	4	0	-1	multi-exon	FALSE	canonical	3	10	junction_1	14.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCTGTCATGGTCAT	6	True	NA	15	True	AATAAA	-20	NA	74461306	74481290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462099_74479059_74479279_74481050
transcript_48396.known	chr15	-	3385	2	FSM	ENSG00000260103.2	ENST00000563287.1	3385	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAATATAA	-7	True	NA	NA	False	AATAAA	-15	NA	74490286	74478069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74481404_74490235
transcript_48397.known	chr15	-	240	2	FSM	ENSG00000260103.2	ENST00000568772.2	240	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGTTTGCATTAAAAT	8881	False	NA	NA	False	NA	NA	NA	74481398	74481024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74481131_74481264
transcript_48399.known	chr15	+	4228	9	FSM	ENSG00000179361.18	ENST00000346246.10	4228	9	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_7	73.904393475625	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCTCTCTCAGTTGCT	3	True	NA	27	True	AATAAA	-20	NA	74541219	74598131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593137_74593237_74595610
transcript_48400.nnic	chr15	+	1012	5	NNC	ENSG00000179361.18	novel	4243	9	NA	NA	2	821	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_4	409.864840526728	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTGACTTTGGGATG	5	True	NA	NA	False	AATAAA	-17	NA	74541221	74575838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74575709
transcript_48401.known	chr15	+	2654	4	FSM	ENSG00000179361.18	ENST00000569680.1	2654	4	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_3	62.1950337424317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATATAATCCTGAAAGA	-1	True	NA	NA	False	NA	NA	NA	74541263	74575017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131
transcript_48403.known	chr15	+	1854	13	FSM	ENSG00000179335.20	ENST00000395066.9	1854	13	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_3	32.9582016432262	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	-7	True	NA	12	True	AATAAA	-19	NA	74615835	74630201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_48408.nic	chr15	+	1859	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	61.5067182419034	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	39	False	NA	12	True	AATAAA	-19	NA	74615881	74630201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_74615950_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_48416.known	chr15	-	3810	9	FSM	ENSG00000179151.13	ENST00000647659.1	3810	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	131.344430315868	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGACTGACTGAGTC	83	False	NA	-19	True	AATAAA	-1	NA	74695936	74630574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74687090_74687180_74695879
transcript_48421.known	chr15	-	1825	8	FSM	ENSG00000179151.13	ENST00000568176.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	109.361411692365	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGGACCTTGTTAAA	19	True	NA	-37	True	NA	NA	NA	74696000	74632541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74687090_74687180_74695879
transcript_48426.known	chr15	-	3744	7	FSM	ENSG00000179151.13	ENST00000315127.9	3744	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	44.4800204836084	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCCGTGTGACTTG	-5	True	NA	-2	True	AATAAA	-18	NA	74696024	74630557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
transcript_48434.nic	chr15	-	1184	4	ISM	ENSG00000179151.13	ENST00000568176.5	1825	8	-49	38490	-20	513	5prime_fragment	FALSE	canonical	3	67	junction_2	134.494113873681	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAAATCCTGTTACTG	-30	True	NA	NA	False	AAAAAG	-11	NA	74696049	74671031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_74671775_74674960_74675143_74687090_74687180_74695879
transcript_48435.nic	chr15	-	1092	3	ISM	ENSG00000179151.13	ENST00000315127.9	3744	7	-22	40474	-17	513	5prime_fragment	FALSE	canonical	3	232	junction_2	68.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAAATCCTGTTACTG	-27	True	NA	NA	False	AAAAAG	-11	NA	74696046	74671031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_74671775_74674960_74675143_74695879
transcript_48437.known	chr15	+	958	1	FSM	ENSG00000179335.20	ENST00000568232.1	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	1624	False	NA	21	True	AATAAA	-21	NA	74629160	74630118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74629200_74630100
transcript_48438.known	chr15	+	833	7	FSM	ENSG00000179335.20	ENST00000569063.5	833	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	61.6062767364928	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGTGAATTCTGAGTT	-7	True	NA	NA	False	NA	NA	NA	74615835	74627401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351
transcript_48439.known	chr15	+	1900	14	FSM	ENSG00000103653.17	ENST00000439220.6	1900	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	33.9060658551703	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGGCATTTTACAAGAA	-29	True	NA	NA	False	AAGAAA	-10	NA	74782088	74802882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74782149_74782667_74782721_74798232_74798313_74798614_74798729_74798825_74798939_74799271_74799492_74800411_74800506_74800680_74800747_74800822_74800923_74801011_74801103_74801521_74801596_74801694_74801891_74801996_74802084_74802330
transcript_48441.known	chr15	-	1717	16	FSM	ENSG00000140474.14	ENST00000568210.5	1717	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_15	47.6149369654337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTACTGGGTCCTGTG	-7	True	NA	NA	False	NA	NA	NA	74842676	74836963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842534
transcript_48442.known	chr15	-	1470	16	FSM	ENSG00000140474.14	ENST00000568667.5	1470	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	62.2633832110727	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACAGATGTGAGCCATCT	-7	True	NA	NA	False	NA	NA	NA	74842676	74837212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842538
transcript_48443.known	chr15	-	2611	16	FSM	ENSG00000140474.14	ENST00000569437.5	2611	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	22.2854212434946	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	1883	False	NA	-3	True	ATTAAA	-13	NA	74843193	74836117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74837245_74837368_74837436_74837756_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_48445.known	chr15	-	2951	15	FSM	ENSG00000140474.14	ENST00000570276.5	2951	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	48.2269295590532	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	1730	False	NA	-3	True	ATTAAA	-13	NA	74843346	74836117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_48450.known	chr15	-	2453	9	FSM	ENSG00000140497.16	ENST00000268099.13	2453	9	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	13.4158255429921	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGTCCACATGTCTGGT	-17	True	NA	-7	True	AATAAA	-16	NA	74873365	74843729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74845218_74845472_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_48454.known	chr15	+	5793	8	FSM	ENSG00000178802.18	ENST00000352410.9	5793	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	28.8118456364668	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCCTCCATTCAACA	-7	True	NA	NA	False	AATAAA	-14	NA	74890041	74902219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_48458.known	chr15	+	1707	8	FSM	ENSG00000178802.18	ENST00000563786.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	52.2814205887284	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCAGCATTAGCTCAG	-7	True	NA	NA	False	NA	NA	NA	74890041	74898044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890437_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_48465.known	chr15	+	2809	7	FSM	ENSG00000178802.18	ENST00000566377.5	2809	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	42.4486618032758	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCTAAAGGGAACCCA	-10	True	NA	6	True	AATAAA	-19	NA	74890038	74899441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897511
transcript_48468.known	chr15	+	1523	7	FSM	ENSG00000178802.18	ENST00000535694.5	1523	7	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	46.8997157063167	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACCAGGTAATTTCTA	-7	True	NA	NA	False	NA	NA	NA	74890041	74898077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_48473.known	chr15	-	865	7	FSM	ENSG00000178761.15	ENST00000563671.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.3434398355838	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	18	True	NA	-11	True	AATAAA	-14	NA	74906793	74899991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74900138_74901949_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_48477.known	chr15	+	1481	6	FSM	ENSG00000178802.18	ENST00000563422.5	1481	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	22.8508205541945	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTCAGGTTAGGAGGC	-7	True	NA	NA	False	AATACA	-39	NA	74890041	74896930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_4848.known	chr1	+	531	4	FSM	ENSG00000132780.17	ENST00000530840.5	531	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	664.793200927928	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACTATTGGGTTTAGGAC	2	True	NA	NA	False	NA	NA	NA	45584044	45602278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45588650_45588949_45591222_45591271_45602254
transcript_48481.known	chr15	+	851	6	FSM	ENSG00000178802.18	ENST00000561470.5	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	57.6804993043576	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTACAGCTGCACC	-7	True	NA	NA	False	NA	NA	NA	74890041	74896188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890202_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_48485.known	chr15	-	568	6	FSM	ENSG00000178761.15	ENST00000564019.1	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75.2366931756041	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCATCCCCCCTAAGC	4	True	NA	NA	False	NA	NA	NA	74906807	74902709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74902784_74904663_74904713_74904981_74905040_74905153_74905232_74906277_74906366_74906586
transcript_48487.known	chr15	+	1148	5	FSM	ENSG00000178802.18	ENST00000565576.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	24.2834820402676	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGGGTGTGGTCACTG	13	True	NA	10	True	NA	NA	NA	74890061	74893786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137
transcript_4849.known	chr1	+	1538	14	FSM	ENSG00000132780.17	ENST00000351223.7	1538	14	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	746.159540025856	3322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	22	False	NA	14	True	AATAAA	-14	NA	45584064	45618247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_48494.known	chr15	-	587	5	FSM	ENSG00000178761.15	ENST00000562698.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.9872347679497	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCATCCCCCCTAAGCC	1	True	NA	NA	False	NA	NA	NA	74906883	74902708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74902784_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_48497.known	chr15	-	208	2	FSM	ENSG00000178761.15	ENST00000564723.1	208	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGAGCTGTGTCTGTGTT	6681	False	NA	-12	True	AATAAA	-13	NA	74900571	74899992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74900138_74900508
transcript_48498.known	chr15	+	1052	6	FSM	ENSG00000178802.18	ENST00000562606.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.1993464017386	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATGCTACTCTGATTT	4	True	NA	NA	False	NA	NA	NA	74890052	74896538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890552_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_4850.known	chr1	+	3225	15	FSM	ENSG00000132780.17	ENST00000350030.8	3225	15	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_5	629.410450585405	5482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	-2	True	NA	18	True	AATAAA	-14	NA	45584040	45618893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_48501.known	chr15	-	1173	5	FSM	ENSG00000178741.12	ENST00000322347.11	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	3850	junction_2	110.338966371813	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGTCTTAGAAGCG	5	True	NA	38	True	ATTAAA	-18	NA	74938073	74919790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937914
transcript_48503.known	chr15	-	579	4	FSM	ENSG00000178741.12	ENST00000567270.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	1672.07263265951	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-2	True	NA	-6	True	AATAAA	-24	NA	74938080	74920274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74937914
transcript_48505.known	chr15	-	571	4	FSM	ENSG00000178741.12	ENST00000568783.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	1881.93346204258	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTAGGTATTTGTTTC	-5	True	NA	-11	True	AATAAA	-19	NA	74938083	74920279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74926765_74926888_74929115_74929233_74937914
transcript_48506.known	chr15	-	441	3	FSM	ENSG00000178741.12	ENST00000562233.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	2038.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	8	True	NA	-6	True	AATAAA	-24	NA	74938070	74920274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74929115_74929233_74937914
transcript_48507.known	chr15	-	2355	1	FSM	ENSG00000178718.7	ENST00000322177.6	2355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACGTTCTGTGGCTGACT	-3	True	NA	-1	True	AATAAA	-18	NA	74956772	74954417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74954400_74956800
transcript_48508.known	chr15	+	593	3	FSM	ENSG00000198794.12	ENST00000567535.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCACTGGAGTAACTT	13	True	NA	NA	False	NA	NA	NA	74995583	75013124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74995674_75011791_75011847_75012676
transcript_48509.known	chr15	+	277	1	FSM	ENSG00000260483.2	ENST00000565251.2	277	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCTTTTTGAGATACTGT	487	False	NA	NA	False	NA	NA	NA	75022979	75023256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75023000_75023300
transcript_4851.known	chr1	+	1036	5	FSM	ENSG00000132780.17	ENST00000470768.5	1036	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	550.252896403099	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGTAGAGGCTGGAT	18	False	NA	NA	False	NA	NA	NA	45584060	45607972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45604935_45605017_45606481_45606592_45607320
transcript_48512.known	chr15	+	2215	6	FSM	ENSG00000138621.12	ENST00000342932.8	2215	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	37.2397636942019	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGAACCAACTTCTT	-9	True	NA	NA	False	AATAAA	-18	NA	75023589	75050726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_48515.known	chr15	+	926	5	FSM	ENSG00000138621.12	ENST00000568649.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	50.0118735901786	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGAGTCCTGGCTGAG	6	True	NA	NA	False	NA	NA	NA	75023604	75049581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75048552_75048722_75049149
transcript_48517.known	chr15	+	464	5	FSM	ENSG00000138621.12	ENST00000569562.5	464	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	42.4882336653337	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACAAAGTGAAAGAAGTC	-9	True	NA	NA	False	NA	NA	NA	75023589	75049182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75023627_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_48519.known	chr15	+	1127	4	FSM	ENSG00000138621.12	ENST00000568207.5	1127	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	29.4882274061286	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTGGGTGTGATTTCT	-13	True	NA	NA	False	NA	NA	NA	75023585	75045168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385
transcript_4852.known	chr1	+	535	6	FSM	ENSG00000132780.17	ENST00000528084.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	622.50738148234	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGGAGAAAAAACAG	-1	True	NA	14	True	NA	NA	NA	45584041	45606532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45594693_45594774_45602254_45602366_45604935_45605017_45606481
transcript_48520.known	chr15	+	757	4	FSM	ENSG00000138621.12	ENST00000564923.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	53.0722777603022	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGTTGTCCTCAC	-12	True	NA	NA	False	NA	NA	NA	75023586	75049490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75023627_75028246_75028454_75048552_75048722_75049149
transcript_48524.nnic	chr15	+	813	3	NIC	ENSG00000138621.12	novel	926	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	63.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAGACTCCATTCTTT	10	True	NA	12	True	AATAAA	-13	NA	75023571	75049738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_75023627_75048552_75048722_75049149
transcript_48525.known	chr15	+	4425	3	FSM	ENSG00000167173.19	ENST00000394987.5	4425	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	1	True	NA	28	True	ATTAAA	-22	NA	75201881	75212169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75202060_75205998_75208825_75210748
transcript_48526.known	chr15	+	4249	2	FSM	ENSG00000167173.19	ENST00000567617.1	4249	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	22	False	NA	28	True	ATTAAA	-22	NA	75206048	75212169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75208877_75210748
transcript_48527.known	chr15	+	353	2	FSM	ENSG00000167173.19	ENST00000564848.1	353	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACAGCCTGCCCCACTC	263	False	NA	NA	False	NA	NA	NA	75202204	75206129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75202427_75205998
transcript_48529.known	chr15	+	2123	18	FSM	ENSG00000140478.16	ENST00000434739.4	3178	18	0	1055	0	-1055	multi-exon	FALSE	canonical	0	0	junction_1	1.43365383611223	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCCAGGCTTGCCCAG	0	True	NA	NA	False	NA	NA	NA	75282834	75294475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75282960_75284649_75284770_75286692_75286774_75287628_75287668_75287928_75287980_75288079_75288162_75288257_75288365_75289396_75289484_75289591_75289700_75289891_75289980_75290380_75290890_75291165_75291235_75292564_75292641_75293072_75293165_75293728_75293832_75293914_75294019_75294107_75294262_75294347
transcript_4853.known	chr1	+	2080	12	FSM	ENSG00000132780.17	ENST00000453748.5	2080	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	793.021765565837	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAAATTGAGGAACT	2	True	NA	-35	True	ACTAAA	-41	NA	45584044	45615354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45600384_45600458_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304
transcript_4854.known	chr1	+	1458	13	FSM	ENSG00000132780.17	ENST00000372052.8	1458	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	922.429295694557	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGAGGCTTTGATGGTT	20	False	NA	13	True	AATAAA	-13	NA	45584062	45618246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_48544.known	chr15	+	895	8	FSM	ENSG00000140365.16	ENST00000267935.13	895	8	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	175.153693442447	6279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	-1	True	NA	NA	False	AATAAA	-17	NA	75336062	75340273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_48545.known	chr15	+	722	7	FSM	ENSG00000140365.16	ENST00000338995.10	722	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	313.144624024676	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	-5	True	NA	NA	False	AATAAA	-17	NA	75336058	75340273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_48546.known	chr15	+	677	6	FSM	ENSG00000140365.16	ENST00000567195.5	677	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	342.760207725459	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTGCAGGGGGTTCT	NA	False	NA	NA	False	AATAAA	-14	NA	75336019	75340270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339964
transcript_48547.known	chr15	+	850	8	FSM	ENSG00000140365.16	ENST00000562610.5	850	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	299.617783728754	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	18	False	NA	NA	False	AATAAA	-15	NA	75336053	75340271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75339036_75339105_75339263_75339345_75339701_75339879_75339964
transcript_48548.known	chr15	+	746	6	FSM	ENSG00000140365.16	ENST00000562789.5	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	390.160274758976	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	15	False	NA	NA	False	AATAAA	-15	NA	75336098	75340271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336231_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_48549.known	chr15	+	666	7	FSM	ENSG00000140365.16	ENST00000568301.1	666	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	283.675724493067	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCAGGTGAGGCTCAGCT	21	False	NA	NA	False	NA	NA	NA	75336104	75339871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336222_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701
transcript_4855.known	chr1	+	632	5	FSM	ENSG00000132780.17	ENST00000534450.1	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	1111.62816962328	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	7416	False	NA	14	True	AATAAA	-14	NA	45615058	45618247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45618060
transcript_48550.known	chr15	+	639	7	FSM	ENSG00000140365.16	ENST00000564815.5	639	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	311.649197371375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGGAGGCAGCCCTGGTT	17	False	NA	NA	False	NA	NA	NA	75336052	75340073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_48551.known	chr15	+	1897	3	FSM	ENSG00000140365.16	ENST00000563220.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGCAGGGGGTTC	1978	False	NA	NA	False	AATAAA	-13	NA	75338061	75340269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75338421_75338645_75339879_75339964
transcript_48552.known	chr15	+	536	5	FSM	ENSG00000140365.16	ENST00000565517.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	364.811595210459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGCAGAAGCACTTGCG	-1	True	NA	NA	False	NA	NA	NA	75336062	75339307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338139_75338354_75338421_75338645_75338686_75338984
transcript_48553.known	chr15	+	2284	2	FSM	ENSG00000140365.16	ENST00000566843.1	2284	2	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	75336020	75340273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061
transcript_48554.nnic	chr15	-	3279	26	NIC	ENSG00000140400.18	novel	3261	26	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	39.5757501508184	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-18	True	NA	-5	True	AATAAA	-16	NA	75368618	75355791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_75356033_75356109_75356220_75356293_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_48559.known	chr15	-	6723	21	FSM	ENSG00000169375.16	ENST00000394947.8	6723	21	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_20	40.2807646402101	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTATTTTTTTTTGT	3	True	NA	-9	True	ATTAAA	-14	NA	75451690	75369378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_4856.known	chr1	-	3641	13	FSM	ENSG00000159592.11	ENST00000355105.8	3641	13	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_12	132.909404190306	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	4	True	NA	-17	True	AATAAA	-27	NA	45686533	45627303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686411
transcript_48564.known	chr15	+	3711	10	FSM	ENSG00000140398.14	ENST00000355059.9	3711	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.3112068961068	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAATGATCATGAGTATCA	-20	True	NA	NA	False	AATAAA	-18	NA	75347038	75357115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75347474_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_48565.known	chr15	+	1797	10	FSM	ENSG00000140398.14	ENST00000569035.5	1797	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9.39398283904367	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	14	False	NA	21	True	AATAAA	-15	NA	75347637	75355247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75348027_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_48566.nic	chr15	+	1784	10	NIC	ENSG00000140398.14	novel	1797	10	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_1	10.7955180457699	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	0	True	NA	21	True	AATAAA	-15	NA	75347623	75355247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_75348000_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_48584.known	chr15	-	710	4	FSM	ENSG00000140400.18	ENST00000562067.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.5231211103713	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	NA	False	NA	-5	True	AATAAA	-16	NA	75356885	75355791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75356033_75356109_75356212_75356293_75356381_75356605
transcript_48589.known	chr15	-	4078	3	FSM	ENSG00000169375.16	ENST00000567289.5	4078	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	27	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATTGTCATGATATTT	-4	True	NA	NA	False	ATTAAA	-20	NA	75451664	75419209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75422824_75430186_75430409_75451422
transcript_48590.nic	chr15	-	844	3	ISM	ENSG00000169375.16	ENST00000360439.8	5050	21	-9	51427	-9	283	5prime_fragment	FALSE	canonical	3	46	junction_2	124	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGCTGCTTCCTTTT	409	False	NA	-3	True	AATAAA	-13	NA	75455792	75422359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_75422824_75430186_75430409_75455634
transcript_48591.nic	chr15	-	1030	3	ISM	ENSG00000169375.16	ENST00000564778.5	617	5	-289	9370	-289	283	5prime_fragment	FALSE	canonical	3	10	junction_2	142	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGCTGCTTCCTTTT	70	False	NA	-3	True	AATAAA	-13	NA	75456131	75422359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_75422824_75430186_75430409_75455787
transcript_48592.known	chr15	-	418	1	FSM	ENSG00000275645.1	ENST00000617892.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTTAGAGATGCATG	NA	False	NA	NA	False	AATAAA	-22	NA	75347161	75346743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75346700_75347200
transcript_48593.known	chr15	+	1430	1	FSM	ENSG00000260274.1	ENST00000563278.1	1430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAGGTAAAACTTACTC	48	False	NA	NA	False	AATAAA	-23	NA	75368154	75369584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75368200_75369600
transcript_48594.known	chr15	-	984	1	FSM	ENSG00000276744.1	ENST00000617588.1	984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTGTCTCACTGTGTG	2254	False	NA	-2	True	AATAAA	-24	NA	75453947	75452963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75453000_75453900
transcript_48595.known	chr15	+	498	2	FSM	ENSG00000140398.14	ENST00000569758.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTCTTGGCACCTCTTGG	6752	False	NA	19	True	AATAAA	-13	NA	75354602	75355245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75354819_75354963
transcript_48596.known	chr15	-	3261	26	FSM	ENSG00000140400.18	ENST00000267978.10	3261	26	0	0	0	0	multi-exon	FALSE	canonical	2	119	junction_9	23.1428952380639	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-7	True	NA	-5	True	AATAAA	-16	NA	75368607	75355791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_48597.known	chr15	-	5050	21	FSM	ENSG00000169375.16	ENST00000360439.8	5050	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_20	69.5284833719246	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAACTCTCAACCCACG	-4	True	NA	38	True	AATAAA	-23	NA	75455783	75370932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455634
transcript_48598.known	chr15	-	2961	24	FSM	ENSG00000140400.18	ENST00000563622.5	2961	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_19	39.5979797464467	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-4	True	NA	-5	True	AATAAA	-16	NA	75368604	75355791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_48600.nic	chr15	-	1873	10	NIC	ENSG00000169371.14	novel	1641	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_9	100.394776313866	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	16	True	NA	NA	False	AATATA	-17	NA	75625699	75598085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625335
transcript_48601.known	chr15	-	1641	10	FSM	ENSG00000169371.14	ENST00000567134.5	1641	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	102.292608617523	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTGGTTCTTAAGC	-6	True	NA	NA	False	AATATA	-20	NA	75625794	75598082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625665
transcript_48602.known	chr15	-	1931	10	FSM	ENSG00000169371.14	ENST00000564644.5	1931	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	109.778340079532	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGGTTTGTGGTTC	27	True	NA	NA	False	AATATA	-14	NA	75625688	75598088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75624714_75624936_75625335
transcript_48606.known	chr15	-	1682	9	FSM	ENSG00000169371.14	ENST00000564675.5	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	73.6355043440323	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	22	True	NA	NA	False	NA	NA	NA	75625693	75598121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
transcript_48607.known	chr15	-	1420	9	FSM	ENSG00000169371.14	ENST00000308588.10	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_8	44.5897970392331	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	-10	True	NA	NA	False	AATATA	-17	NA	75625725	75598085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
transcript_48623.known	chr15	+	8002	2	FSM	ENSG00000173548.9	ENST00000308527.6	8002	2	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCTTTCTGTTGGT	-6	True	NA	9	True	ATTAAA	-16	NA	75647911	75662301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75650574_75656961
transcript_48624.known	chr15	-	1132	1	FSM	ENSG00000177971.9	ENST00000403490.3	1132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	892	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTAATCTGTCTGGTTT	-14	True	NA	-25	True	AATAAA	-26	NA	75640224	75639092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75639100_75640200
transcript_48625.known	chr15	+	572	3	FSM	ENSG00000260206.1	ENST00000564683.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAACGAATTGAACCAG	NA	False	NA	NA	False	NA	NA	NA	75636138	75639239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75636513_75637894_75637898_75639044
transcript_48626.known	chr15	+	520	3	FSM	ENSG00000260288.5	ENST00000661459.1	520	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCACGTCCATGCTCATT	NA	False	NA	NA	False	CATAAA	-18	NA	75758517	75763320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75758614_75762341_75762428_75762982
transcript_48627.nnic	chr15	-	1219	2	NNC	ENSG00000246877.2	novel	763	2	NA	NA	-11	6	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGGTAATTGTCTATGA	NA	False	NA	NA	False	ATTAAA	-29	NA	75738640	75734777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_75735743_75738386
transcript_48628.known	chr15	+	1132	4	FSM	ENSG00000182950.3	ENST00000332145.3	1132	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTCCTTTTCTGT	-2	True	NA	NA	False	NA	NA	NA	75724040	75727688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75724318_75725107_75725219_75726057_75726172_75727058
transcript_48629.known	chr15	+	2968	13	FSM	ENSG00000140367.12	ENST00000267938.9	2968	13	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_2	22.7370231609642	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTCATTTTTCC	0	True	NA	67	True	TTTAAA	-37	NA	75843446	75901078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75843847_75854385_75854488_75859877_75859983_75868950_75869011_75873427_75873569_75876186_75876272_75877960_75878022_75879097_75879189_75883365_75883425_75890434_75890484_75890918_75891015_75896994_75897062_75899426
transcript_4863.known	chr1	-	3599	12	FSM	ENSG00000159592.11	ENST00000290795.7	3599	12	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_11	133.001273839671	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	1	True	NA	-17	True	AATAAA	-27	NA	45686536	45627303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686411
transcript_48638.known	chr15	+	2164	6	FSM	ENSG00000167196.14	ENST00000569022.1	2164	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	204.713849067424	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTGTGCAGGTATGAC	-1	True	NA	21	True	AATAAA	-15	NA	75903877	75934107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75904104_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_4864.nic	chr1	-	3413	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	13	-189	combination_of_known_junctions	FALSE	canonical	3	137	junction_11	166.491307196204	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	-20	True	NA	-60	True	AATAAA	-15	NA	45687120	45627492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_48644.known	chr15	+	10707	7	FSM	ENSG00000167196.14	ENST00000308275.8	10707	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	212.144146487451	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGCTTTTCATTTTG	-1	True	NA	8	True	AATAAA	-15	NA	75903877	75942511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_48645.known	chr15	+	1486	6	FSM	ENSG00000167196.14	ENST00000453211.6	1486	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	224.066954279296	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGGAGCCATTACTT	-1	True	NA	NA	False	GATAAA	-15	NA	75903877	75930655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883
transcript_48648.known	chr15	+	1932	4	FSM	ENSG00000169758.13	ENST00000559079.5	1932	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGTCTGTCCTTTCA	2	True	NA	NA	False	ATTAAA	-19	NA	76059984	76114203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_76060017_76109032_76109184_76112017_76112109_76112545
transcript_48649.nnic	chr15	-	1536	3	Antisense	novelGene_ENSG00000169758.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACCTGTTTCTTTTCA	NA	False	NA	NA	False	AATAAA	-15	NA	76116367	76107147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_-_76108393_76109062_76109190_76116203
transcript_48653.known	chr15	-	942	10	FSM	ENSG00000140374.17	ENST00000560726.5	942	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	328.465117376767	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGAGCTACATTTCATA	26	False	76311492	-106	True	NA	NA	NA	76311466	76216467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76311349
transcript_48654.known	chr15	-	792	9	FSM	ENSG00000140374.17	ENST00000559602.5	792	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	350.164604150677	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATTGGAAAGCATGGA	17	True	NA	-121	True	NA	NA	NA	76311414	76216482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76311349
transcript_48658.known	chr15	-	2289	12	FSM	ENSG00000140374.17	ENST00000557943.6	2289	12	0	0	0	0	multi-exon	TRUE	canonical	3	732	junction_11	104.943274720636	3454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGCATTTCAGTCTTC	23	False	76311492	1	True	TATAAA	-19	NA	76311469	76215352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_48659.known	chr15	-	1289	11	FSM	ENSG00000140374.17	ENST00000267950.12	1289	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	321.806914158164	4706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGTTTATTTATT	-17	True	NA	-23	True	AAGAAA	-7	NA	76311448	76216249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76295590_76295738_76311349
transcript_48660.known	chr15	-	1735	10	FSM	ENSG00000140374.17	ENST00000559075.5	1735	10	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_9	114.493516987202	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATCCCAGCACTTTGG	19	True	NA	NA	False	NA	NA	NA	76311412	76230503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_48662.known	chr15	-	2507	19	FSM	ENSG00000140386.13	ENST00000564590.5	2507	19	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	7.79224844332296	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAGAAAAGAAAAAGCT	6	True	NA	NA	False	NA	NA	NA	76905444	76702965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76703003_76705902_76705985_76728594_76728738_76733228_76733385_76753807_76753949_76764960_76765073_76765336_76765455_76765562_76765639_76766917_76767089_76771723_76771955_76774854_76775118_76795279_76795441_76800247_76800365_76804532_76804634_76841733_76841932_76857808_76857880_76862415_76862534_76883811_76883877_76905298
transcript_48670.known	chr15	+	6218	7	FSM	ENSG00000117906.14	ENST00000394885.8	6218	7	0	0	0	0	multi-exon	FALSE	canonical	3	1548	junction_4	106.020045274467	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGCCTGCTATAAAAT	6	True	NA	NA	False	AATAAA	-13	NA	76931748	76954393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76943757_76943872_76947420_76947518_76948409_76948553_76949069
transcript_48671.known	chr15	+	1052	10	FSM	ENSG00000140368.13	ENST00000557995.1	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	4.5242829047783	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTGCGTTCTGTTCTCC	NA	False	NA	-6	True	NA	NA	NA	77028342	77037313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_77028424_77028553_77028653_77029528_77029575_77030501_77030582_77031179_77031279_77032297_77032395_77032861_77032953_77035507_77035564_77035801_77035936_77037044
transcript_48678.nic	chr15	+	940	7	ISM	ENSG00000140368.13	ENST00000557995.1	1052	10	2063	-18	-1911	0	3prime_fragment	FALSE	canonical	2	6	junction_2	5.36708072936821	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTGTGCTGGGGTCCC	NA	False	NA	12	True	AATAAA	-18	NA	77030405	77037331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_77030582_77031179_77031279_77032297_77032395_77032861_77032953_77035507_77035564_77035801_77035936_77037044
transcript_48685.nnic	chr15	+	752	5	NIC	ENSG00000140368.13	novel	1349	14	NA	NA	-1911	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	6.13901457890434	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTGTGCTGGGGTCCC	NA	False	NA	12	True	AATAAA	-18	NA	77030405	77037331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_77030582_77031179_77031279_77035507_77035564_77035801_77035936_77037044
transcript_48688.nnic	chr15	+	649	4	NIC	ENSG00000140368.13	novel	1349	14	NA	NA	-1907	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	6.53197264742181	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTGTGCTGGGGTCCC	NA	False	NA	12	True	AATAAA	-18	NA	77030409	77037331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_77030582_77035507_77035564_77035801_77035936_77037044
transcript_48691.known	chr15	-	1592	7	FSM	ENSG00000140391.15	ENST00000561277.5	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	592.531480645168	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTCAATAAACTCTGT	9	True	NA	-35	True	AATAGA	-5	NA	77071122	77046059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77071004
transcript_48692.known	chr15	-	1340	7	FSM	ENSG00000140391.15	ENST00000558745.5	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	602.472244635017	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGACTAAAATAGATTG	NA	False	NA	-36	True	TTTAAA	-38	NA	77083984	77046331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77083846
transcript_4870.known	chr1	-	850	2	FSM	ENSG00000159592.11	ENST00000480941.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCATAGTGCCATAACT	960	False	45687165	NA	False	NA	NA	NA	45687146	45660529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45661226_45686992
transcript_48703.nnic	chr15	-	2251	3	NNC	ENSG00000173517.11	novel	12003	10	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAATGCTTGTCCTTT	7	True	NA	-5	True	AATAAA	-25	NA	77420173	77108157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_77110159_77286422_77286505_77420005
transcript_48704.nic	chr15	-	985	3	ISM	ENSG00000173517.11	ENST00000569159.1	531	6	-79	33252	-29	-1989	5prime_fragment	FALSE	canonical	3	26	junction_1	1.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGAATCAAATAGAT	7	True	NA	NA	False	AATAGA	-26	NA	77420173	77285750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_77286505_77365162_77365226_77420005
transcript_48705.nic	chr15	-	956	2	ISM	ENSG00000173517.11	ENST00000567337.5	555	5	-69	33295	-29	-1955	5prime_fragment	FALSE	canonical	2	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATAGGGGATATCAAAT	7	True	NA	NA	False	AATAAA	-7	NA	77420173	77285716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_77286505_77420005
transcript_48707.known	chr15	+	3805	10	FSM	ENSG00000140382.15	ENST00000336216.9	3805	10	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_6	42.2479453806796	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	-17	True	NA	16	True	ATTAAA	-17	NA	77420887	77485603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_48708.nic	chr15	+	1906	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-452	5999	24	0	5prime_fragment	FALSE	canonical	3	267	junction_6	38.6795730974374	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTTTTCTTATGCTT	621	False	NA	14	True	AATAAA	-16	NA	77420435	77479604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_48710.known	chr15	+	747	3	FSM	ENSG00000140382.15	ENST00000560986.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCTGGGCAGTCATG	30	False	NA	NA	False	NA	NA	NA	77420934	77464823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_77421005_77458403_77458497_77464239
transcript_48713.known	chr15	-	3477	2	FSM	ENSG00000169783.13	ENST00000355300.7	3477	2	0	0	0	0	multi-exon	TRUE	canonical	3	407	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGACTGTTCTCATTAT	-4	True	NA	-15	True	NA	NA	NA	77632912	77613026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_77615901_77632309
transcript_48718.known	chr15	-	6215	14	FSM	ENSG00000103740.10	ENST00000258873.9	6215	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	3.93437287770598	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTTCAAGTGCATT	-22	True	NA	NA	False	AAAAAG	-15	NA	78234565	78167467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78171530_78173592_78173840_78174384_78174525_78178613_78178832_78179549_78179781_78180754_78180937_78181968_78182146_78182465_78182616_78182704_78182786_78193505_78193627_78193931_78194021_78194505_78194727_78208001_78208103_78234370
transcript_4872.known	chr1	-	1947	10	FSM	ENSG00000197429.11	ENST00000359942.8	1947	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.3628275961788	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTCAGGGATTTTCA	-6	True	NA	NA	False	CATAAA	-38	NA	45750650	45694323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45694516_45700069_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_48720.known	chr15	+	2110	12	FSM	ENSG00000166411.14	ENST00000560667.5	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	95.0964712435493	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTCCAAGAGCTTTTA	-11	True	NA	NA	False	NA	NA	NA	78149359	78169715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78149431_78155212_78155276_78156907_78157163_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_48728.known	chr15	+	4083	11	FSM	ENSG00000166411.14	ENST00000299518.7	4083	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	17.5968747225182	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTAGGTTTCTGTCTTG	-9	True	NA	NA	False	AATAAA	-21	NA	78149361	78171945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_48734.known	chr15	+	1595	11	FSM	ENSG00000166411.14	ENST00000558554.5	1595	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	78.2840980020847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTTACAGAAATTACTGAG	-11	True	NA	NA	False	AATAGA	-12	NA	78149359	78169560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78160091_78160207_78161685_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_48741.known	chr15	-	1499	6	FSM	ENSG00000136425.14	ENST00000258930.8	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	65.3923542931435	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTCTGATCCTTGA	-2	True	NA	17	True	NA	NA	NA	78131445	78104605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78123704_78123740_78131164
transcript_48744.known	chr15	+	559	2	FSM	ENSG00000166411.14	ENST00000560414.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCTTATATAGGCTTTG	21	False	NA	NA	False	NA	NA	NA	78149391	78155732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78149431_78155212
transcript_48745.known	chr15	+	535	2	FSM	ENSG00000166411.14	ENST00000558016.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGACTGTATCATTTGCT	NA	False	NA	33	True	NA	NA	NA	78166104	78169258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78166303_78168921
transcript_48746.known	chr15	-	1036	11	FSM	ENSG00000140395.9	ENST00000560569.5	1036	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	225.514877558001	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGGAAATTCACATCTA	6948	False	NA	NA	False	AGTAAA	-41	NA	78299570	78283467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299455
transcript_48747.known	chr15	+	2961	8	FSM	ENSG00000140403.13	ENST00000343789.7	2961	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.76380914300945	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTTGCTTTTTCCTTT	42	True	NA	13	True	ATTAAA	-23	NA	78264561	78282196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
transcript_48751.known	chr15	-	1202	11	FSM	ENSG00000140395.9	ENST00000267973.7	1202	11	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_10	64.7580882979107	3291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-3	True	NA	-6	True	CATAAA	-17	NA	78299609	78283234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
transcript_48752.known	chr15	-	1266	11	FSM	ENSG00000140395.9	ENST00000558311.5	1266	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	214.57607042725	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	1	True	NA	-6	True	CATAAA	-17	NA	78299605	78283234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295794_78299561
transcript_48753.known	chr15	-	884	9	FSM	ENSG00000140395.9	ENST00000558459.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_6	238.260361789367	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTTTCTTAATGCAA	15	True	NA	-27	True	NA	NA	NA	78299591	78283255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78294945_78294974_78295674_78295726_78299561
transcript_48761.known	chr15	+	401	1	FSM	ENSG00000166426.8	ENST00000560753.1	401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	522	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACCTTTTCCCTTTTTTG	4259	False	NA	26	True	ATTAAA	-16	NA	78347820	78348221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78347800_78348200
transcript_48762.known	chr15	+	738	4	FSM	ENSG00000166426.8	ENST00000299529.7	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	2742	junction_3	88.6052418815551	26702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCCCTTTTTTGGTTT	1	True	NA	30	True	ATTAAA	-20	NA	78340352	78348225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78340499_78341042_78341222_78343498_78343613_78347926
transcript_48764.known	chr15	+	6324	22	FSM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	21.0416927661992	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTCTTGTTCTGTTTT	-19	True	NA	16	True	AATAAA	-19	NA	78438215	78501453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
transcript_48779.known	chr15	+	4396	8	FSM	ENSG00000136381.13	ENST00000560440.5	4396	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_6	21.6380239770792	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCAAGAGTAGAGGAGC	-9	True	NA	NA	False	NA	NA	NA	78438283	78476700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241
transcript_4878.known	chr1	-	3117	9	FSM	ENSG00000197429.11	ENST00000396478.4	3117	9	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	10.1242283656583	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTCCTTTTTTGCTA	-9	True	NA	NA	False	AAAAAG	-7	NA	45750653	45698710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_48780.nic	chr15	+	1500	5	ISM	ENSG00000136381.13	ENST00000560440.5	4396	8	-82	9476	-14	788	5prime_fragment	FALSE	canonical	3	164	junction_3	19.1882125274868	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCCGTATGTTAACGATA	-33	True	NA	NA	False	NA	NA	NA	78438201	78467224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270
transcript_48785.known	chr15	+	847	5	FSM	ENSG00000188266.14	ENST00000408962.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1.4790199457749	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAAGTGCCAGGTCCTG	-10	True	NA	9	True	AATAAA	-20	NA	78507563	78537372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78507672_78513083_78513426_78514967_78515108_78527379_78527564_78537299
transcript_48786.nic	chr15	+	986	4	ISM	ENSG00000188266.14	ENST00000566289.5	2180	5	-56	9856	-38	-9319	5prime_fragment	FALSE	canonical	1	1	junction_3	4.64279609239471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGCAGTGTAAATAGTAT	-1	True	NA	NA	False	NA	NA	NA	78507525	78518945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_78507672_78513083_78513426_78514967_78515108_78518587
transcript_48789.known	chr15	+	1422	4	FSM	ENSG00000188266.14	ENST00000566332.5	1422	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGATCTAAGTGAGAATCTA	2	True	NA	NA	False	NA	NA	NA	78507616	78528264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78507672_78513083_78513426_78514967_78515108_78527379
transcript_48791.nnic	chr15	+	492	4	NIC	ENSG00000188266.14	novel	847	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.32049379893857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAAGTGCCAGGTCCTG	3	True	NA	9	True	AATAAA	-20	NA	78507576	78537372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_78507672_78514967_78515108_78527379_78527564_78537299
transcript_48796.known	chr15	+	1094	9	FSM	ENSG00000041357.16	ENST00000559082.5	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1238.37562455824	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGAAGGAATAAATT	-19	True	NA	10	True	AATAAA	-11	NA	78540420	78549186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540464_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_48799.known	chr15	+	786	9	FSM	ENSG00000041357.16	ENST00000559365.5	786	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1254.26990092842	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGTAATCAGAGTTC	-1	True	NA	NA	False	NA	NA	NA	78540734	78548820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540836_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_48810.known	chr15	+	1019	8	FSM	ENSG00000041357.16	ENST00000413382.6	1019	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1337.87682847236	2662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	-13	True	NA	28	True	AATAAA	-29	NA	78540426	78549204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_48811.known	chr15	+	944	9	FSM	ENSG00000041357.16	ENST00000560217.5	944	9	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_3	1208.75250129007	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTGGGAAAATAGGACA	NA	False	NA	NA	False	NA	NA	NA	78540404	78549037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542575_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_48812.known	chr15	+	674	7	FSM	ENSG00000041357.16	ENST00000559146.5	674	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	1407.72366488124	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAATTCATATCCTCTCC	0	True	NA	NA	False	AGTAAA	-15	NA	78540439	78546696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544868_78544958_78545633_78545765_78546574
transcript_48813.known	chr15	+	773	8	FSM	ENSG00000041357.16	ENST00000558281.5	773	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	1316.00910300183	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCATTTCAGTGTAAAA	38	False	NA	NA	False	GATAAA	-30	NA	78540477	78548970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78548789
transcript_48814.known	chr15	+	635	8	FSM	ENSG00000041357.16	ENST00000557929.5	635	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1346.89796289436	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAATGACCTTGAAGTC	27	False	NA	NA	False	TATAAA	-4	NA	78540466	78546610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546578
transcript_48820.known	chr15	-	3015	6	FSM	ENSG00000080644.16	ENST00000326828.6	3015	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.27636238330917	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCTGTGACTCATGTTT	-11	True	NA	-1	True	AATAAA	-16	NA	78620996	78595308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78596733_78601252_78602265_78617023_78617134_78618616_78618662_78618775_78618916_78620712
transcript_48822.known	chr15	-	2596	6	FSM	ENSG00000117971.12	ENST00000261751.8	2596	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	2.56124969497314	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGGCTCCTACCCCTCC	0	True	NA	NA	False	AATAAA	-16	NA	78641210	78624110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78625292_78628966_78629946_78631075_78631186_78631287_78631333_78635438_78635588_78641078
transcript_48841.known	chr15	+	1468	12	FSM	ENSG00000185787.15	ENST00000559345.5	1468	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	2326.4949872329	2351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATGTTAATGCTATAT	6	True	NA	NA	False	NA	NA	NA	78873004	78897389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78873219_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_48856.known	chr15	+	855	10	FSM	ENSG00000185787.15	ENST00000558502.5	855	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2530.31843016342	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACTTATGTTTGGATC	31	False	NA	NA	False	NA	NA	NA	78873029	78897077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78873058_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_48864.known	chr15	+	678	8	FSM	ENSG00000185787.15	ENST00000559930.5	678	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	2732.0083589677	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTAAAACCGTGGCTTGT	-2	True	NA	NA	False	AGTAAA	-11	NA	78872886	78892259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78873119_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211
transcript_48867.known	chr15	+	2172	12	FSM	ENSG00000185787.15	ENST00000426013.7	2172	12	0	0	0	0	multi-exon	FALSE	canonical	3	6761	junction_6	612.367739135468	21782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCCCTTTGATAGG	1	True	NA	NA	False	ATTAAA	-26	NA	78872889	78898139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_48868.known	chr15	+	933	7	FSM	ENSG00000185787.15	ENST00000561171.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3111.26987739733	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCATCCTTTGCAAGTC	26	False	NA	-74	True	AGTAAA	-1	NA	78873024	78897514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78894819_78894905_78896982
transcript_48869.known	chr15	-	1540	13	FSM	ENSG00000103811.18	ENST00000677316.1	1540	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	64.6307890164501	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-30	True	NA	-29	True	AATAAA	-24	NA	78945058	78921768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537_78944632_78944890
transcript_48871.known	chr15	-	1783	12	FSM	ENSG00000103811.18	ENST00000677448.1	1783	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_11	50.0517087991909	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGATGGAGCATGCTGG	-21	True	NA	-36	True	AATAAA	-17	NA	78945049	78921775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537
transcript_48872.known	chr15	-	1881	12	FSM	ENSG00000103811.18	ENST00000678886.1	1881	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	49.2190247434284	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTGTGGCCTCCCCA	6	False	NA	NA	False	NA	NA	NA	78945094	78921482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944777
transcript_48874.known	chr15	-	1386	12	FSM	ENSG00000103811.18	ENST00000525807.6	1386	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	51.1634877558092	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGCATGCTGGTCCTG	23	True	NA	-31	True	AATAAA	-22	NA	78945005	78921770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939167_78944890
transcript_48875.known	chr15	-	1503	12	FSM	ENSG00000103811.18	ENST00000676808.1	1503	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	50.7829606355231	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-14	True	NA	-29	True	AATAAA	-24	NA	78945042	78921768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937497_78939139_78939172_78944890
transcript_48876.known	chr15	-	1524	13	FSM	ENSG00000103811.18	ENST00000679172.1	1524	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	63.340514943702	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGAGCATGCTGGTC	25	True	NA	-34	True	AATAAA	-19	NA	78945003	78921773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78937685_78937824_78939139_78939172_78944890
transcript_48877.known	chr15	-	1564	13	FSM	ENSG00000103811.18	ENST00000677874.1	1564	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	74.2534604506005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGTATTCGCTGTTC	-29	True	NA	-78	True	NA	NA	NA	78945057	78921817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78931868_78932042_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939167_78944890
transcript_48878.known	chr15	-	1903	12	FSM	ENSG00000103811.18	ENST00000676865.1	1903	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	50.2348204941816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGAGCACCTCCCCAG	24	True	NA	-50	True	AATAAA	-3	NA	78945004	78921789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78932039_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_48879.known	chr15	-	1136	11	FSM	ENSG00000103811.18	ENST00000676850.1	1136	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.4710396314005	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTAAAGTCTGCCAG	20	False	NA	NA	False	AATAAA	-21	NA	78945080	78923753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78923985_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_48880.known	chr15	-	572	2	FSM	ENSG00000103811.18	ENST00000528436.2	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATTAGTATATTGGAGG	-17	True	NA	NA	False	AAGAAA	-1	NA	78945045	78938754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78939172_78944890
transcript_48882.known	chr15	+	1483	4	FSM	ENSG00000166557.14	ENST00000543455.1	1483	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	227.288851953241	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGACTTGTGCCTT	-4	True	NA	14	True	AATAAA	-15	NA	79311158	79322837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_79311418_79313756_79314006_79314540_79314656_79321977
transcript_48883.known	chr15	+	1418	3	FSM	ENSG00000166557.14	ENST00000299705.10	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	22	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTTGTGCCTTTAT	3	True	NA	17	True	AATAAA	-18	NA	79311111	79322840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_79311418_79313756_79314006_79321977
transcript_48906.known	chr15	-	679	4	FSM	ENSG00000259332.3	ENST00000615374.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	392.782665378988	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCCCTTGTCAAAAAT	-10	True	NA	NA	False	AGTAAA	-14	NA	79923106	79845149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79845443_79889092_79889355_79907628_79907685_79923038
transcript_4892.nnic	chr1	+	1461	3	NNC	ENSG00000159596.7	novel	1465	3	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	138	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	810	False	NA	11	True	ATTAAA	-15	NA	45688162	45694436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_45688254_45690973_45691111_45693203
transcript_48920.known	chr15	-	2301	3	FSM	ENSG00000136371.11	ENST00000258874.4	2301	3	0	0	0	0	multi-exon	TRUE	canonical	3	595	junction_2	124.5	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTGAATATGGGTTTG	-9	True	NA	NA	False	AGTAAA	-16	NA	79897014	79843546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79845443_79889092_79889355_79896871
transcript_48921.known	chr15	-	948	3	FSM	ENSG00000136371.11	ENST00000559722.2	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	417	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	2771	False	NA	-1	True	ATTAAA	-34	NA	79897379	79844975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79845443_79889092_79889355_79897160
transcript_48922.known	chr15	-	632	3	FSM	ENSG00000259332.3	ENST00000494999.1	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	408.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCTACTATGATGCCT	-42	True	NA	NA	False	NA	NA	NA	79923754	79845375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79845443_79889092_79889355_79923451
transcript_48924.nic	chr15	-	953	3	NIC	ENSG00000136371.11	novel	2301	3	NA	NA	-64	-64	combination_of_known_junctions	FALSE	canonical	3	239	junction_2	302.5	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGTGTGAATAGTAGAA	3072	False	NA	-65	True	TATAAA	-19	NA	79897078	79845039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_48937.nnic	chr15	-	685	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	189	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTTTGTCTTCAGTT	-60	True	NA	-2	True	AATAAA	-22	NA	79923772	79898839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_48944.nnic	chr15	-	621	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	189	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-60	True	NA	-28	True	AATAAA	-23	NA	79923772	79898903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_48945.known	chr15	-	694	2	FSM	ENSG00000180953.11	ENST00000562759.1	694	2	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTTTGTCTTCAGTT	7101	False	NA	-2	True	AATAAA	-22	NA	79908036	79898839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79899126_79907628
transcript_48946.known	chr15	-	529	3	FSM	ENSG00000180953.11	ENST00000485386.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	87	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	10	True	NA	-28	True	AATAAA	-23	NA	79923702	79898903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79899126_79907628_79907685_79923451
transcript_48960.known	chr15	+	1602	7	FSM	ENSG00000086666.19	ENST00000559775.5	1602	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	869.317820030294	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAAAAGGAAAACCA	14	False	NA	-10	True	NA	NA	NA	80072582	80138358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80072648_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_4897.known	chr1	+	1465	3	FSM	ENSG00000159596.7	ENST00000372025.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	7	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	-6	True	NA	11	True	ATTAAA	-15	NA	45688180	45694436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45688276_45690973_45691111_45693203
transcript_48970.known	chr15	+	1446	6	FSM	ENSG00000086666.19	ENST00000559835.5	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	800.491099263446	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	9	True	NA	-8	True	NA	NA	NA	80072577	80138360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_48973.known	chr15	+	780	5	FSM	ENSG00000086666.19	ENST00000558688.5	780	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	876.916472647196	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTATTAGACAAATAAGGT	18	False	NA	NA	False	AAAAAG	-22	NA	80072586	80131517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179
transcript_48976.known	chr15	+	1472	6	FSM	ENSG00000086666.19	ENST00000558494.5	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	255.987812209878	4645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	35	True	NA	-8	True	NA	NA	NA	80059713	80138360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_48977.known	chr15	+	1706	7	FSM	ENSG00000086666.19	ENST00000261749.11	1706	7	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	794.156085973588	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	-3	True	NA	25	True	AATAAA	-27	NA	80059675	80138393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80059810_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_48979.known	chr15	+	2152	15	FSM	ENSG00000103876.14	ENST00000407106.5	2152	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	27.4818121673226	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTGCATGTCCAGTGT	-20	True	NA	NA	False	AATACA	-18	NA	80152779	80186946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80152906_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_4898.known	chr1	+	722	2	FSM	ENSG00000159596.7	ENST00000496366.1	722	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAGTAGTTAAAAGTAG	9	True	NA	NA	False	NA	NA	NA	45688195	45693845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45688276_45693203
transcript_48980.known	chr15	+	1471	15	FSM	ENSG00000103876.14	ENST00000261755.9	1471	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	31.1805963996318	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	-6	True	NA	13	True	AATAAA	-26	NA	80152793	80186343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80152842_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_48985.known	chr15	+	1456	14	FSM	ENSG00000103876.14	ENST00000561421.6	1456	14	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	13.3828469211889	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTGTGTCCACTTA	-9	True	NA	19	True	AATAAA	-32	NA	80152998	80186349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_4899.known	chr1	-	5174	11	FSM	ENSG00000117461.15	ENST00000420542.5	5174	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	30.6568100101756	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGTCTTCATGCTA	295	False	NA	NA	False	AATAAA	-17	NA	46133036	46040141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846_46131957_46132783
transcript_48993.known	chr15	+	1507	12	FSM	ENSG00000103876.14	ENST00000682012.1	1507	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	33.0546754672911	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATCGTGATTTGATCCA	-28	True	NA	37	True	NA	NA	NA	80152979	80186367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168317_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_48997.known	chr15	+	2124	5	FSM	ENSG00000103876.14	ENST00000558767.6	2124	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	11.5108644332213	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCAATGCTCACTTTCAT	-6	True	NA	NA	False	ATTAAA	-19	NA	80152793	80163744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245
transcript_48998.known	chr15	-	998	5	FSM	ENSG00000259495.3	ENST00000656160.1	998	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	8.04285397107271	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCATCTTGCAACTTG	746	False	NA	-23	True	AATAAA	-9	NA	80404214	80344868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_80345128_80347698_80347785_80397943_80398007_80403501_80403586_80403708
transcript_48999.known	chr15	+	2361	3	FSM	ENSG00000136379.12	ENST00000258884.5	2361	3	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	4.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGCTTGTGCAGTTT	-18	True	NA	18	True	AATAAA	-18	NA	80695309	80755621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80696020_80749512_80749693_80754150
transcript_49.known	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1804	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00111_+_0_1000
transcript_49005.known	chr15	-	1392	3	FSM	ENSG00000117899.11	ENST00000422879.3	1392	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTCCAAAATGATTTCAG	1	True	NA	NA	False	TTTAAA	-7	NA	80989819	80948085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_80948899_80951958_80952297_80989578
transcript_49008.known	chr15	-	4200	3	FSM	ENSG00000117899.11	ENST00000261758.6	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_2	31	5254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACCTGTATCAGAT	1	True	NA	-5	True	AATAAA	-27	NA	80989819	80975751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_80979478_80981949_80982183_80989578
transcript_49009.known	chr15	+	1612	7	FSM	ENSG00000156206.14	ENST00000286732.5	1612	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.763762615825973	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCATCTGTTCATTCC	-7	True	NA	NA	False	AATAAA	-19	NA	81134269	81149179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_81134399_81135269_81135360_81136515_81136749_81138050_81138136_81143661_81143821_81147857_81147932_81148337
transcript_4901.known	chr1	-	5596	10	FSM	ENSG00000117461.15	ENST00000262741.10	5596	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	15.6914697279198	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTTCATGCTATG	19	True	NA	NA	False	AATAAA	-19	NA	46132629	46040139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846
transcript_49010.known	chr15	-	4887	6	FSM	ENSG00000172345.14	ENST00000302824.7	4887	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	4.01995024844836	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCATTAAGCTCTCTT	-2	True	NA	0	True	AATAAA	-25	NA	81324141	81309052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81322898_81322949_81324000
transcript_49013.known	chr15	-	1264	5	FSM	ENSG00000172345.14	ENST00000325346.6	1264	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.39509972887452	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCAATGTGTCTTCCA	-12	True	NA	-7	True	TTTAAA	-25	NA	81324183	81312667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81324000
transcript_49017.known	chr15	+	1026	5	FSM	ENSG00000259343.8	ENST00000559277.2	1026	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.0312195418814	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	81324367	81343150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_81324562_81332344_81332542_81341149_81341220_81341561_81341709_81342732
transcript_49019.nnic	chr15	+	929	4	NNC	ENSG00000259343.8	novel	836	4	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	14.7271480229163	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	81324308	81343150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_81324562_81332344_81332456_81341561_81341709_81342732
transcript_49020.nic	chr15	+	1015	4	FSM	ENSG00000259343.8	ENST00000687585.1	836	4	-179	0	-29	0	multi-exon	FALSE	canonical	3	22	junction_3	6.94422221866655	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	81324308	81343150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_81324562_81332344_81332542_81341561_81341709_81342732
transcript_49023.nic	chr15	+	734	3	NIC	ENSG00000259343.8	novel	836	4	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	NA	False	NA	NA	False	AATAAA	-25	NA	81324392	81343150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_81324562_81341561_81341709_81342732
transcript_49055.nnic	chr15	-	717	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	100445	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	22.6274169979695	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81697625	81660374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81697153_81697278_81697507
transcript_4906.nnic	chr1	+	613	3	NNC	ENSG00000227857.2	novel	339	2	NA	NA	-1414	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAATATGATAATTGTG	NA	False	NA	NA	False	AATAAA	-34	NA	46133116	46139081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46133391_46134530_46134655_46138866
transcript_49061.nnic	chr15	-	748	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-357	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.3541565040626	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81798427	81660374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81797923_81798045_81798275
transcript_49067.nnic	chr15	-	736	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-357	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.0277537068951	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	81798427	81660386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81707869_81708009_81797923_81798045_81798275
transcript_49072.nnic	chr15	-	948	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-339	-13	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	NA	False	NA	NA	False	AAAAAG	-12	NA	81798409	81660387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660628_81706499_81706583_81707869_81708009_81797923
transcript_4908.known	chr1	-	2719	22	FSM	ENSG00000085998.15	ENST00000371984.8	2719	22	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	49.1348738439858	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	-6	True	NA	-16	True	ATTAAA	-20	NA	46198434	46188682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_49082.nnic	chr15	-	861	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	100262	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	23	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81697808	81660374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81697422
transcript_49083.nnic	chr15	-	622	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	100416	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	23.5	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81697654	81660374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81697507
transcript_49086.nnic	chr15	-	651	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-381	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81798451	81660374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81798275
transcript_49087.known	chr15	-	566	3	FSM	ENSG00000259692.6	ENST00000560097.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	20.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTTGAAGTAGAGCCC	9374	False	NA	NA	False	NA	NA	NA	81871125	81660481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_81660711_81661999_81662139_81870927
transcript_49089.nnic	chr15	-	949	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-339	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	81798409	81660386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81707869_81708009_81797923
transcript_49091.nnic	chr15	-	850	3	NNC	ENSG00000259692.6	novel	566	3	NA	NA	-189	-12	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAGAAGAA	9185	False	NA	NA	False	AAAAAG	-13	NA	81871314	81660386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81707869_81708009_81870927
transcript_49097.nnic	chr15	-	678	3	NNC	ENSG00000259692.6	novel	566	3	NA	NA	-53	-13	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	1	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGAAGA	9321	False	NA	NA	False	AAAAAG	-12	NA	81871178	81660387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81662034_81662139_81870927
transcript_49104.known	chr15	-	3643	20	FSM	ENSG00000140598.15	ENST00000268206.12	3643	20	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_11	29.4355015833365	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATGTTAGAGAACATGT	-33	True	NA	-16	True	AATAAA	-25	NA	82262734	82130232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_49110.nic	chr15	-	2316	18	ISM	ENSG00000140598.15	ENST00000268206.12	3643	20	-15	22060	-15	-136	5prime_fragment	FALSE	canonical	3	205	junction_9	27.3398450622472	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAAAGAAGATCAAAGCAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	82262749	82152292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_49116.nnic	chr15	-	1147	5	NNC	ENSG00000140598.15	novel	521	3	NA	NA	-15	9887	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	127.930645273132	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTACATGTGGTTCAT	NA	False	NA	NA	False	AATAAA	-21	NA	82262749	82251800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_82252549_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_49122.known	chr15	+	445	4	FSM	ENSG00000188659.10	ENST00000562097.5	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	4.02768199119819	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTCCTTATGTAGC	21	True	NA	0	True	AATAAA	-11	NA	82262826	82264881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82262933_82263138_82263189_82263358_82263439_82264672
transcript_49128.nic	chr15	+	1010	3	ISM	ENSG00000188659.10	ENST00000682753.1	3304	4	-223	12833	-215	0	5prime_fragment	FALSE	canonical	3	9	junction_1	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCACTTTGTGTCACAT	NA	False	NA	NA	False	ATTAAA	-17	NA	82262594	82272094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_82262933_82265568_82265749_82271602
transcript_49131.known	chr15	+	404	3	FSM	ENSG00000188659.10	ENST00000566861.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	20	True	NA	8	True	AATAAA	-19	NA	82262825	82264889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82262933_82263358_82263439_82264672
transcript_49132.nic	chr15	+	1079	3	NIC	ENSG00000188659.10	novel	811	4	NA	NA	-28	0	intron_retention	FALSE	canonical	3	16	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCACTTTGTGTCACAT	NA	False	NA	NA	False	ATTAAA	-17	NA	82262781	82272094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_82263189_82265568_82265749_82271602
transcript_49133.nic	chr15	+	700	3	NIC	ENSG00000188659.10	novel	445	4	NA	NA	-24	0	intron_retention	FALSE	canonical	3	11	junction_1	4.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	-20	True	NA	8	True	AATAAA	-19	NA	82262785	82264889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_82263189_82263358_82263439_82264672
transcript_49135.known	chr15	+	3134	3	FSM	ENSG00000188659.10	ENST00000339465.5	3134	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTACCTAATTTTTTT	5	True	NA	NA	False	AATAAA	-33	NA	82262810	82284930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82262933_82271602_82271803_82282118
transcript_49137.nic	chr15	+	394	2	ISM	ENSG00000188659.10	ENST00000682753.1	3304	4	-19	19099	-11	80	5prime_fragment	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTGTTCAGTTGATTT	-7	True	NA	NA	False	AATAAA	-19	NA	82262798	82265828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_82262933_82265568
transcript_49138.known	chr15	+	551	2	FSM	ENSG00000188659.10	ENST00000569120.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATTTAGTAACTATT	12	True	NA	NA	False	AAGAAA	-44	NA	82262817	82265748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82263189_82265568
transcript_49139.known	chr15	+	340	2	FSM	ENSG00000188659.10	ENST00000566205.1	340	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	4	True	NA	8	True	AATAAA	-19	NA	82262809	82264889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82262933_82264672
transcript_49140.known	chr15	+	262	2	FSM	ENSG00000188659.10	ENST00000565006.1	262	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	279	False	NA	8	True	AATAAA	-19	NA	82263143	82264889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82263189_82264672
transcript_49141.known	chr15	+	3304	4	FSM	ENSG00000188659.10	ENST00000682753.1	3304	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	4.92160768674447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTTTACCTAATTTT	12	True	NA	NA	False	AATAAA	-30	NA	82262817	82284927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82262933_82265568_82265749_82271602_82271803_82282118
transcript_49147.known	chr15	+	6549	6	FSM	ENSG00000197978.10	ENST00000618706.1	6549	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	10.0079968025574	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGTCTTGAAAACT	NA	False	NA	30	True	ATTAAA	-30	NA	82430044	82439153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82432898_82433561_82433650_82434033_82434603_82434868_82434930_82435966_82436070_82436278
transcript_49150.known	chr15	+	648	5	FSM	ENSG00000259429.5	ENST00000618775.4	648	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	11.6404467268228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAGATGTTAGAGGTCT	14	False	NA	NA	False	NA	NA	NA	82355141	82414738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82355375_82400659_82400717_82404611_82404752_82408287_82408368_82414600
transcript_49153.nnic	chr15	-	1246	5	Fusion	ENSG00000182774.13_ENSG00000237550.6	novel	488	5	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	5243.22689285901	26119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTTCAAGCACAATA	351	False	NA	1	True	AATAAA	-32	NA	82540140	82372196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_82372950_82536720_82536882_82538305_82538372_82538879_82538986_82539980
transcript_49156.known	chr15	-	636	2	FSM	ENSG00000237550.6	ENST00000418824.3	636	2	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	0	7682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTTCAAGCACAATAT	-7	True	NA	2	True	AATAAA	-33	NA	82372912	82372195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82372417_82372497
transcript_49157.known	chr15	-	579	1	FSM	ENSG00000237550.6	ENST00000466501.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2041	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGAGTTACCTGGCT	32	False	NA	NA	False	AAAAAG	-27	NA	82372888	82372309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82372300_82372900
transcript_49158.known	chr15	+	600	2	FSM	ENSG00000259429.5	ENST00000561287.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAGCTAAGCAT	NA	False	NA	NA	False	GATAAA	-19	NA	82414680	82416003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82414805_82415527
transcript_4916.known	chr1	+	1849	2	FSM	ENSG00000171357.6	ENST00000371980.4	1849	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGGGGATCTCACTTCC	-18	True	NA	10	True	AATAGA	-15	NA	46203333	46221256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46203625_46219698
transcript_49165.known	chr15	-	2068	10	FSM	ENSG00000214575.10	ENST00000617462.4	2068	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.80058475033046	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GGAAAAAAAAAAAAAAAAAA	5	True	NA	NA	False	NA	NA	NA	82571809	82544296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343
transcript_49172.known	chr15	-	522	5	FSM	ENSG00000182774.13	ENST00000561068.5	522	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6062.07204675101	3067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCTTGCCTGTGTCAT	360	False	NA	-25	True	AATAAA	-9	NA	82540131	82536758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539299_82539376_82539980
transcript_49178.known	chr15	-	488	5	FSM	ENSG00000182774.13	ENST00000647841.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_4	1585.89036506311	336374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCATCTTTGCAGT	-2	True	NA	-16	True	AATAAA	-18	NA	82540457	82536749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_49179.known	chr15	-	583	6	FSM	ENSG00000182774.13	ENST00000558397.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	5561.64884184537	2378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGCCTGTGTCATCTT	-4	True	NA	-22	True	AATAAA	-12	NA	82540437	82536755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82536882_82537921_82538043_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_49180.known	chr15	-	1909	4	FSM	ENSG00000182774.13	ENST00000561157.5	1909	4	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_3	1802.5173138327	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTGTGTCATCTTT	-4	True	NA	-21	True	AATAAA	-13	NA	82540459	82536754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82538372_82538879_82538986_82539980_82540133_82540425
transcript_49181.known	chr15	-	932	4	FSM	ENSG00000182774.13	ENST00000560639.1	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	8528	junction_3	1521.97072537184	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGAATTTTTTCTGTA	3	True	NA	-75	True	NA	NA	NA	82540452	82536808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82536882_82538305_82538986_82539980_82540133_82540425
transcript_49184.known	chr15	-	2650	18	FSM	ENSG00000103723.17	ENST00000660624.1	2650	18	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	6.75164980478884	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGCTCACCTTTCC	60	False	NA	-2	True	AATAAA	-14	NA	82680407	82659281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174
transcript_49186.known	chr15	-	829	6	FSM	ENSG00000103723.17	ENST00000666894.1	829	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.1913557184073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGGAGAGTAACATGG	57	False	NA	NA	False	NA	NA	NA	82680410	82676950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82677166_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174
transcript_4919.known	chr1	+	2577	19	FSM	ENSG00000085999.13	ENST00000671528.1	2577	19	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	84.099973576426	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCAGTGTGGTAAGCC	12	False	NA	19	True	AATAAA	-22	NA	46247699	46278480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46247747_46248317_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_49190.nnic	chr15	-	490	4	Fusion	ENSG00000286817.1_ENSG00000259315.1	novel	537	2	NA	NA	-35	0	multi-exon	FALSE	canonical	1	1	junction_3	2.86744175568088	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGTGTGTCCTTGTT	5	True	NA	-3	True	ATTAAA	-18	NA	82750490	82730789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_82730936_82738513_82738615_82739763_82739890_82750373
transcript_49197.known	chr15	+	674	5	FSM	ENSG00000250988.7	ENST00000559366.1	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	28.1813324738203	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	14	True	NA	NA	False	AATAAA	-19	NA	82750583	82757206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903_82756940_82757045
transcript_49204.nic	chr15	+	699	4	NIC	ENSG00000250988.7	novel	790	4	NA	NA	-35	0	intron_retention	FALSE	canonical	2	19	junction_1	22.9927524813074	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	834	False	NA	NA	False	AATAAA	-17	NA	82750528	82757204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_82750715_82754628_82754785_82756729_82756786_82756903
transcript_49206.known	chr15	+	790	4	FSM	ENSG00000250988.7	ENST00000561107.5	790	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	8.16496580927726	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	2	True	NA	NA	False	AATAAA	-17	NA	82750571	82757204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903
transcript_49215.known	chr15	+	725	3	FSM	ENSG00000250988.7	ENST00000558174.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	30	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	13	True	NA	NA	False	AATAAA	-19	NA	82750582	82757206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82750849_82754628_82754785_82756903
transcript_49219.known	chr15	+	594	2	FSM	ENSG00000250988.7	ENST00000544685.2	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAAAAAACAGTGTTGA	-6	True	NA	NA	False	TATAAA	-9	NA	82750563	82754937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82750849_82754628
transcript_49220.known	chr15	+	677	5	FSM	ENSG00000156232.7	ENST00000560964.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.17635004720366	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCAACCAAGAACGTCAAA	4241	False	NA	NA	False	GATAAA	-28	NA	82817919	82826794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82818090_82819322_82819489_82823099_82823288_82826387_82826497_82826750
transcript_49225.known	chr15	-	518	1	FSM	ENSG00000103942.13	ENST00000619240.1	518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCAGATTTGATGCCCT	94	False	NA	NA	False	AATACA	-18	NA	82986070	82985552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82985600_82986100
transcript_49226.known	chr15	-	1261	2	FSM	ENSG00000103942.13	ENST00000500334.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGTGGCTCACGCCTATA	296	False	NA	NA	False	AATAAA	-14	NA	82985868	82958129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82959309_82985786
transcript_4924.known	chr1	+	3078	18	FSM	ENSG00000085999.13	ENST00000371975.9	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_6	40.6263248386584	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	6	True	NA	12	True	AATAAA	-15	NA	46247762	46278473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_49240.known	chr15	+	1565	4	FSM	ENSG00000169612.4	ENST00000304191.4	1565	4	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	30.169889330626	2940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCAGTTAGCCCATT	-3	True	NA	37	True	AATAAA	-34	NA	82986209	82991057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82986370_82987335_82987385_82989009_82989189_82989880
transcript_49241.known	chr15	-	561	4	FSM	ENSG00000169609.14	ENST00000538348.6	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.3755076016458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTCTCTCCAAATAATGAA	1	True	NA	NA	False	ATTAAA	-18	NA	83011607	82988962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82989158_83008547_83008676_83010236_83010364_83011496
transcript_49242.known	chr15	-	11274	4	FSM	ENSG00000169609.14	ENST00000304177.10	11274	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.0039122552804	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTTATATAATTTTTCA	-31	True	NA	-7	True	AATAAA	-20	NA	83011639	82994816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83005693_83008547_83008676_83010236_83010364_83011496
transcript_49243.known	chr15	-	419	4	FSM	ENSG00000169609.14	ENST00000563387.5	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	60.8623218602628	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCCACAACGGTTCTG	6094	False	NA	-21	True	ATTAAA	-5	NA	83011543	83004866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011485
transcript_49245.known	chr15	-	3194	8	FSM	ENSG00000064726.10	ENST00000261721.9	3194	8	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_4	54.3582222532214	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTATGTCATTTGCCT	-21	True	NA	NA	False	AATAAA	-26	NA	83067252	83016422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83018226_83018706_83018854_83020674_83020763_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
transcript_49247.known	chr15	+	1885	10	FSM	ENSG00000136404.16	ENST00000322019.14	1885	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.52659116242039	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTTAAAGAAAATTTGT	-9	True	NA	NA	False	ATTAAA	-30	NA	83107644	83137408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119682_83121920_83122004_83122756_83122879_83124671_83124777_83126754_83126848_83127357_83127478_83136480
transcript_49254.known	chr15	-	934	7	FSM	ENSG00000166503.9	ENST00000563790.5	934	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	273.517011455514	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATTCCTCTCTGTTGTG	10	True	NA	NA	False	NA	NA	NA	83207541	83139131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83192251_83192309_83207330
transcript_49255.known	chr15	+	1469	6	FSM	ENSG00000136404.16	ENST00000258909.13	1469	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.27042925125413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTTAAAGAAAATTTGT	4	True	NA	NA	False	ATTAAA	-30	NA	83107657	83137408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119682_83127357_83127478_83136480
transcript_49258.known	chr15	-	12538	6	FSM	ENSG00000166503.9	ENST00000299633.7	12538	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_5	34.6156034181119	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGTGTAACCTTGG	18	True	NA	NA	False	AATAAA	-15	NA	83207823	83127752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83207330
transcript_49271.nnic	chr15	-	535	4	NNC	ENSG00000166503.9	novel	449	4	NA	NA	-602	-110	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	275.720067379136	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAAAAAGCAGGCTCAA	NA	False	NA	11	True	AAGAAA	-1	NA	83208425	83157460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_83157574_83157902_83158042_83163998_83164076_83208219
transcript_49272.known	chr15	+	1647	9	FSM	ENSG00000140600.17	ENST00000563901.5	1647	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	44.9325883963967	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCTTGGTTATTTTT	2	True	NA	30	True	AATAAA	-20	NA	83447375	83618739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_83447579_83559252_83559322_83565133_83565207_83568535_83568673_83572564_83572699_83576582_83576742_83586982_83587087_83588661_83588772_83618081
transcript_49279.known	chr15	+	812	5	FSM	ENSG00000259511.3	ENST00000558195.3	812	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCTTGCTATATGTCA	272	False	NA	NA	False	AATACA	-17	NA	84172908	84188379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84173075_84173978_84174158_84181981_84182084_84186841_84186989_84188161
transcript_49284.known	chr15	+	347	3	FSM	ENSG00000259511.3	ENST00000637567.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTCGGTGAGGAAAGAAA	336	False	NA	NA	False	NA	NA	NA	84172972	84182076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84173075_84174007_84174158_84181981
transcript_49302.nnic	chr15	-	1317	8	NNC	ENSG00000189136.9	novel	1631	8	NA	NA	2	11	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	5.78174466995659	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAATGAGAAAGG	NA	False	NA	NA	False	NA	NA	NA	84571007	84527184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_84527478_84527618_84527668_84538531_84538617_84542144_84542285_84546220_84546278_84554965_84555071_84569504_84569684_84570598
transcript_49323.nic	chr15	-	1674	9	NIC	ENSG00000177082.13	novel	2063	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_2	38.9163766941374	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	4303	False	NA	-35	True	AATAAA	-15	NA	84654303	84643081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_84643724_84645470_84645837_84645972_84646086_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_49330.known	chr15	-	1915	8	FSM	ENSG00000177082.13	ENST00000398528.7	1915	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	28.6975786506138	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	4263	False	NA	NA	False	NA	NA	NA	84654343	84642767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_49331.known	chr15	-	5331	8	FSM	ENSG00000177082.13	ENST00000434634.7	5331	8	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_7	23.2053829082471	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCATCTCCCTAAAATG	-1	True	NA	-14	True	AATAAA	-20	NA	84654283	84639284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_49337.known	chr15	-	2063	8	FSM	ENSG00000177082.13	ENST00000559994.5	2063	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	37.6845120570718	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	2	True	NA	NA	False	NA	NA	NA	84654280	84642767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84645972_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_49355.known	chr15	-	1007	6	FSM	ENSG00000177082.13	ENST00000561329.5	1007	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_5	26.4832022232962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGGAGAGAGATGGTG	8	True	NA	NA	False	NA	NA	NA	84654274	84645693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_49359.nic	chr15	+	1126	5	NIC	ENSG00000176371.14	novel	910	4	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	50.5717312339611	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTCTGTCTTTTACT	-20	True	NA	28	True	AATAAA	-18	NA	84601000	84623717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_84601136_84603819_84604334_84620601_84620773_84622645_84622715_84623480
transcript_49362.nic	chr15	+	1174	5	NIC	ENSG00000176371.14	novel	910	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	35.5176012703561	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTCTGTCTTTTACT	-15	True	NA	28	True	AATAAA	-18	NA	84601005	84623717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_84601189_84603819_84604334_84620601_84620773_84622645_84622715_84623480
transcript_49365.known	chr15	-	1180	5	FSM	ENSG00000177082.13	ENST00000560252.5	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	29.608909132219	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACTAAAAATACA	4308	False	NA	NA	False	NA	NA	NA	84654298	84647085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_4937.known	chr1	-	2842	10	FSM	ENSG00000132128.18	ENST00000615587.4	2842	10	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_6	43.8983112248645	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGCCCTTCTTGATG	-1	True	NA	-26	True	AATAAA	-14	NA	46303263	46278402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46279085_46279181_46279258_46279491_46279615_46280191_46280291_46280395_46280561_46281124_46281386_46285361_46286500_46297562_46297634_46298283_46298371_46303123
transcript_49370.nnic	chr15	+	1124	4	NNC	ENSG00000176371.14	novel	906	3	NA	NA	-4	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	53.2749680640188	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTGCTTCCGAGC	-20	True	NA	9	True	AATAAA	-17	NA	84601000	84616610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_84601136_84603819_84604334_84614654_84614828_84616308
transcript_49375.nnic	chr15	+	1172	4	NNC	ENSG00000176371.14	novel	906	3	NA	NA	1	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	30.6521704868604	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTGCTTCCGAGC	-15	True	NA	9	True	AATAAA	-17	NA	84601005	84616610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_84601189_84603819_84604334_84614654_84614828_84616308
transcript_49382.known	chr15	+	8975	4	FSM	ENSG00000176700.21	ENST00000348993.9	8975	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	1.4142135623731	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTCTGAGTCTACTA	-15	True	NA	4	True	ATTAAA	-15	NA	84631450	84647478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84632299_84637346_84637421_84638395_84638478_84639507
transcript_49385.known	chr15	-	528	4	FSM	ENSG00000177082.13	ENST00000558019.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	42.6640624205223	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCGGAGTTGCTCCAGG	-1	True	NA	NA	False	NA	NA	NA	84654283	84648311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84648626_84652713_84652803_84653631_84653700_84654226
transcript_49388.known	chr15	+	993	3	FSM	ENSG00000176371.14	ENST00000334141.7	993	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	41.5	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	-3	True	NA	12	True	AATAAA	-25	NA	84601017	84606889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84601136_84603819_84604334_84606528
transcript_49389.known	chr15	+	906	3	FSM	ENSG00000176371.14	ENST00000379358.7	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	30.5	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	29	False	NA	13	True	AATAAA	-21	NA	84601049	84616614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84601136_84603819_84604334_84616308
transcript_4939.nnic	chr1	-	715	4	NNC	ENSG00000132128.18	novel	3389	2	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	305.210674052458	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	-16	True	NA	3	True	AATAAA	-22	NA	46303352	46296741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_46297070_46297562_46297634_46298283_46298371_46303123
transcript_49390.known	chr15	+	2390	3	FSM	ENSG00000176371.14	ENST00000327179.6	2390	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGGCCGAGTCCTCAGA	29	False	NA	-34	True	NA	NA	NA	84601049	84622394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84601136_84603819_84604331_84620601
transcript_49395.nic	chr15	+	1058	3	NIC	ENSG00000176371.14	novel	993	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	17.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	-15	True	NA	12	True	AATAAA	-25	NA	84601005	84606889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_84601189_84603819_84604334_84606528
transcript_49396.nic	chr15	+	1003	3	NIC	ENSG00000176371.14	novel	906	3	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_2	6.5	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	-15	True	NA	13	True	AATAAA	-21	NA	84601005	84616614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_84601189_84603819_84604334_84616308
transcript_49397.known	chr15	+	3813	3	FSM	ENSG00000176371.14	ENST00000448803.6	3813	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	0.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	-16	True	NA	27	True	AATAAA	-17	NA	84601004	84623716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84601189_84603819_84604334_84620601
transcript_49401.known	chr15	-	277	1	FSM	ENSG00000277578.1	ENST00000613066.1	277	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACACACACACACAAAATA	NA	False	NA	NA	False	NA	NA	NA	84642763	84642486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84642500_84642800
transcript_49402.known	chr15	+	910	4	FSM	ENSG00000176371.14	ENST00000485222.2	910	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	33.2565782966318	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTCTGTCTTTTACT	-3	True	NA	28	True	AATAAA	-18	NA	84603900	84623717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84604334_84620601_84620773_84622645_84622715_84623480
transcript_49403.known	chr15	-	2031	7	FSM	ENSG00000177082.13	ENST00000559126.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	13.6218778278017	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	4360	False	NA	-35	True	AATAAA	-15	NA	84654246	84643081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631
transcript_49405.known	chr15	-	655	3	FSM	ENSG00000197696.10	ENST00000360476.8	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	0.5	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTGGTCCTCTCCTT	1	True	NA	-4	True	AATAAA	-18	NA	84658199	84655131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84655410_84657175_84657349_84657995
transcript_4941.nic	chr1	-	1208	3	ISM	ENSG00000132128.18	ENST00000498402.2	2068	5	-78	12575	14	0	5prime_fragment	FALSE	canonical	3	634	junction_1	25	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	-16	True	NA	3	True	AATAAA	-22	NA	46303352	46296741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_46297634_46298283_46298371_46303123
transcript_4942.known	chr1	+	2549	19	FSM	ENSG00000085999.13	ENST00000442598.5	2549	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.3760902808748	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	7	False	NA	12	True	AATAAA	-15	NA	46247694	46278473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46247747_46248343_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_49436.known	chr15	-	1079	6	FSM	ENSG00000140612.14	ENST00000268220.12	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_3	28.4042250378355	18283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-2	True	NA	-12	True	AATAAA	-18	NA	84716139	84669543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_49437.known	chr15	-	1223	7	FSM	ENSG00000140612.14	ENST00000455959.7	1223	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	551.047386548763	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCACATTGAACCCC	7	True	NA	-28	True	AATAAA	-2	NA	84716163	84669559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84714730_84714867_84716024
transcript_49438.known	chr15	-	1256	5	FSM	ENSG00000140612.14	ENST00000559729.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	523.305121320249	2088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAATTGTGTTTGTC	-28	True	NA	-6	True	AATAAA	-24	NA	84716460	84669537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84691534_84691645_84716024
transcript_49439.known	chr15	-	882	5	FSM	ENSG00000140612.14	ENST00000558217.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	512.05590515099	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	0	True	NA	-13	True	AATAAA	-17	NA	84716063	84669544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84687624_84687775_84691534_84691645_84716024
transcript_49440.known	chr15	-	1089	7	FSM	ENSG00000140612.14	ENST00000560266.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	557.049194915095	1903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-1	True	NA	-12	True	AATAAA	-18	NA	84716111	84669543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84679931_84679970_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_49441.known	chr15	-	971	5	FSM	ENSG00000140612.14	ENST00000558134.5	971	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	518.180168956706	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	3	True	NA	-12	True	AATAAA	-18	NA	84716089	84669543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_49445.known	chr15	+	5459	15	FSM	ENSG00000170776.22	ENST00000559362.5	5459	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	7.2678352053021	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATCACTGTGGGCATT	-3	True	NA	14	True	AATAAA	-26	NA	85380586	85684874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_85380799_85485709_85485754_85521427_85521576_85533583_85533881_85543771_85543956_85575130_85575330_85578929_85582108_85585701_85585824_85639373_85639450_85645817_85645955_85655416_85655788_85664562_85664756_85669721_85669831_85682157_85682213_85684740
transcript_49446.known	chr15	-	3650	3	FSM	ENSG00000183655.13	ENST00000337975.6	3650	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	8	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCCTGCCTTGTGTG	-8	True	NA	-5	True	AATAAA	-15	NA	85794925	85759325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_85761012_85768016_85769821_85794765
transcript_49447.known	chr15	-	548	2	FSM	ENSG00000183655.13	ENST00000559131.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTGCCCTGCTGGGG	-1	True	NA	NA	False	GGGGCT	-27	NA	85794918	85760616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_85761012_85794765
transcript_49448.known	chr15	+	801	3	FSM	ENSG00000273540.5	ENST00000560803.2	801	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTTTAGTGTGTTTGT	-6	True	NA	NA	False	ATTAAA	-20	NA	87038716	87047303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_87038818_87042004_87042198_87046796
transcript_49451.known	chr15	+	1966	3	FSM	ENSG00000259527.2	ENST00000560153.2	1966	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGTGACGATCACGTC	0	True	NA	NA	False	AATAAA	-14	NA	87576928	87579866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_87577048_87577709_87577765_87578074
transcript_49453.known	chr15	-	3826	14	FSM	ENSG00000140538.16	ENST00000317501.7	3826	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.40552978787364	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAATCAGACCTCTTA	17	True	NA	NA	False	AATAAA	-21	NA	88256159	87977363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_87979464_87981225_87981361_88032856_88033046_88126270_88126374_88127161_88127227_88128710_88128735_88135100_88135398_88135898_88136041_88136466_88136610_88137403_88137562_88147334_88147404_88183417_88183490_88184224_88184300_88255905
transcript_49464.known	chr15	-	2315	6	FSM	ENSG00000140543.15	ENST00000564406.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	18.9631221058137	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTGGTTGGATGA	5	True	NA	NA	False	AATAAA	-21	NA	88546653	88512482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88536311_88536382_88546539
transcript_49472.known	chr15	-	2276	5	FSM	ENSG00000140543.15	ENST00000268148.13	2276	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	10.2072278312968	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-23	True	NA	NA	False	AATAAA	-24	NA	88546681	88512479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88546539
transcript_49488.known	chr15	-	986	4	FSM	ENSG00000259494.2	ENST00000312475.5	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	46.4279609239471	2894	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTCTCAGCTGATTTG	1	True	NA	-15	True	AATAAA	-15	NA	88467388	88459477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88459864_88464702_88464877_88465586_88465774_88467149
transcript_49489.known	chr15	+	3392	6	FSM	ENSG00000181991.16	ENST00000325844.9	3392	6	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	40.4949379552556	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTGTCTCTTAATCAT	2	True	NA	11	True	AATAAA	-18	NA	88467707	88480776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467907_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_49490.known	chr15	+	2002	6	FSM	ENSG00000181991.16	ENST00000559323.5	2002	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	120.150572200052	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	0	True	NA	16	True	AATAAA	-18	NA	88467705	88478263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467907_88469146_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_49491.known	chr15	+	458	3	FSM	ENSG00000181991.16	ENST00000560850.1	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	115	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGCATTTACCCTCCCA	2	True	NA	19	True	AATAAA	-14	NA	88467707	88472620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467907_88468025_88472354
transcript_49492.known	chr15	+	766	5	FSM	ENSG00000181991.16	ENST00000353598.6	766	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	124.383228371031	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATAATTTTGAGATTTT	12	True	NA	12	True	AATAAA	-14	NA	88467717	88478259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467907_88468025_88475109_88475240_88476988_88477055_88477871
transcript_49493.known	chr15	+	453	2	FSM	ENSG00000181991.16	ENST00000559125.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAGTGAATGTGAGAT	-2	True	NA	85	True	AGTAAA	-23	NA	88467677	88468258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467910
transcript_49494.known	chr15	+	447	2	FSM	ENSG00000181991.16	ENST00000559557.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGCATTTACCCTCCCA	257	False	NA	19	True	AATAAA	-14	NA	88467962	88472620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88468025_88472235
transcript_49495.known	chr15	+	726	2	FSM	ENSG00000181991.16	ENST00000561262.1	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	0	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGATTTTTTGCTTTC	9019	False	NA	20	True	AATAAA	-22	NA	88476724	88478267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88477055_88477871
transcript_49496.known	chr15	+	3072	4	FSM	ENSG00000181026.15	ENST00000332810.4	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	71.3411210702184	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	-9	True	NA	28	True	AATAAA	-18	NA	88621339	88632281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88621383_88626145_88626750_88629225_88629427_88630057
transcript_49497.known	chr15	+	1242	2	FSM	ENSG00000181026.15	ENST00000557787.1	1242	2	0	0	0	0	multi-exon	TRUE	canonical	3	515	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGGGCTTAAGGGGAAA	-12	True	NA	NA	False	CATAAA	-2	NA	88621336	88627341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88621383_88626145
transcript_49501.known	chr15	+	1583	4	FSM	ENSG00000172183.16	ENST00000306072.10	1583	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.2836838484589	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAATTTTTTTTTTT	-6	True	NA	NA	False	AATAAA	-17	NA	88639015	88656483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88639077_88639342_88639595_88652109_88652311_88655414
transcript_49502.known	chr15	+	634	4	FSM	ENSG00000172183.16	ENST00000559876.2	634	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	18.7082869338697	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCATCCAGCCCGTTCC	-7	True	NA	-88	True	NA	NA	NA	88638952	88655531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88639077_88639342_88639595_88652169_88652311_88655414
transcript_49507.known	chr15	-	1892	5	FSM	ENSG00000140511.12	ENST00000359595.8	1892	5	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	40.1901729282172	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCCTTTTCTGTGT	-9	True	NA	-5	True	AATAAA	-25	NA	88895544	88877293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88895458
transcript_49510.known	chr15	-	3071	6	FSM	ENSG00000140511.12	ENST00000558770.5	3071	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	120.867530793013	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCAGCCCTTTTCTGTG	4	True	NA	-6	True	AATAAA	-24	NA	88895531	88877294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88878257_88878966_88879270_88879417_88880611_88881356_88881726_88887174_88887346_88895458
transcript_49511.known	chr15	-	807	3	FSM	ENSG00000140511.12	ENST00000563808.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGACAGAGCTGGGGTC	22	True	NA	NA	False	NA	NA	NA	88895513	88881144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88881726_88887174_88887346_88895458
transcript_49515.known	chr15	-	1936	8	FSM	ENSG00000140545.15	ENST00000268150.13	1936	8	0	0	0	0	multi-exon	FALSE	canonical	3	2267	junction_2	144.108519200367	9196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	0	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_4953.known	chr1	+	674	5	FSM	ENSG00000173660.12	ENST00000496387.5	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	2895.09579936485	7554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	23	True	NA	76	True	AATAAA	-19	NA	46303708	46316776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46303821_46309100_46309128_46309896_46310045_46310154_46310317_46316551
transcript_49532.nnic	chr15	+	691	3	NNC	ENSG00000260123.2	novel	597	4	NA	NA	-225	2505	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGTCTCAGTAAGAACAG	NA	False	NA	NA	False	AATAAA	-21	NA	89040997	89079720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_89041301_89070090_89070192_89079433
transcript_49533.known	chr15	+	8424	11	FSM	ENSG00000140526.18	ENST00000352732.10	8424	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	10.0995049383621	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTATGTGTCCTTTG	0	True	NA	12	True	AATAAA	-14	NA	89088455	89202355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89088564_89113724_89113825_89116321_89116522_89151676_89151853_89155366_89155535_89175811_89175996_89185423_89185517_89188192_89188304_89191079_89191150_89193234_89193320_89195226
transcript_49535.known	chr15	+	787	2	FSM	ENSG00000140526.18	ENST00000562254.1	787	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAATCAGGAAGCCCAAC	2	True	NA	NA	False	AATAAA	-4	NA	89088509	89094364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89088564_89093631
transcript_4954.known	chr1	+	687	2	FSM	ENSG00000173660.12	ENST00000486951.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	5331	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTC	21	True	NA	NA	False	NA	NA	NA	46303706	46309673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46303821_46309100
transcript_4955.known	chr1	+	553	4	FSM	ENSG00000173660.12	ENST00000489056.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2812.95325236663	4754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	12	True	NA	76	True	AATAAA	-19	NA	46303697	46316776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46303821_46309100_46309144_46310154_46310317_46316551
transcript_49564.nic	chr15	+	1111	10	NIC	ENSG00000140525.19	novel	3690	36	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	125.545427320105	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	-30	True	NA	8	True	AATAAA	-14	NA	89243963	89268631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_49573.nic	chr15	+	922	9	NIC	ENSG00000140525.19	novel	1070	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	209	junction_1	133.153048688342	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTGTGTATTTTA	-30	True	NA	8	True	AATAAA	-20	NA	89243963	89264651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521
transcript_49594.known	chr15	+	4733	38	FSM	ENSG00000140525.19	ENST00000310775.12	4733	38	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	84.2970503362846	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTGGTTGAAGTAGG	-15	True	NA	16	True	AATAAA	-16	NA	89243978	89317131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_49595.known	chr15	+	1070	11	FSM	ENSG00000140525.19	ENST00000567996.5	1070	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	261.512217687817	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTGTGTATTTTA	23	True	NA	8	True	AATAAA	-20	NA	89244016	89264651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89244068_89245194_89245312_89245755_89245840_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521
transcript_49596.known	chr15	+	526	5	FSM	ENSG00000140525.19	ENST00000570225.5	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_4	17.4696164811939	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	NA	False	NA	8	True	AATAAA	-14	NA	89261837	89268631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_49597.known	chr15	+	4713	37	FSM	ENSG00000140525.19	ENST00000300027.12	4713	37	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_23	113.032481265288	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCTGAGTCAAGAGTGGA	NA	False	NA	NA	False	TATAAA	-20	NA	89243948	89317261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_49598.known	chr15	+	754	8	FSM	ENSG00000140525.19	ENST00000565255.5	754	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	171.902559015037	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTTTCTCCTTAGTTC	-4	True	NA	NA	False	NA	NA	NA	89243989	89264037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89244045_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902
transcript_49599.known	chr15	+	1109	1	FSM	ENSG00000261441.1	ENST00000569473.1	1109	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	AATACA	-17	NA	89335052	89336161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89335100_89336200
transcript_49600.known	chr15	-	1952	11	FSM	ENSG00000140519.14	ENST00000268122.9	1952	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.4	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGAATGCTCCAATGG	-1	True	NA	NA	False	AATAAA	-24	NA	89496583	89471406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89471856_89472710_89472864_89476754_89476829_89477081_89477207_89477516_89477654_89477836_89477975_89479321_89479489_89480260_89480409_89483066_89483218_89486798_89486986_89496360
transcript_49602.known	chr15	+	6788	22	FSM	ENSG00000140534.14	ENST00000268138.12	6788	22	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	14.2766637997713	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCAGTTTCCCCTATA	-2	True	NA	14	True	ATTAAA	-21	NA	89575468	89628023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89576241_89582685_89582966_89584285_89584528_89585707_89585943_89592046_89592177_89594414_89594555_89595392_89595612_89599323_89599476_89600584_89600686_89601297_89601392_89601488_89601569_89601736_89601977_89602795_89602893_89606767_89606826_89608802_89608950_89616404_89616496_89618151_89618211_89619707_89619843_89621392_89621551_89623622_89625787_89625935_89626062_89626955
transcript_49603.nnic	chr15	-	589	3	NNC	ENSG00000166813.16	novel	4567	19	NA	NA	-35	-2239	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTTTAATGGCTAC	9989	False	NA	NA	False	NA	NA	NA	89655502	89650741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_89650875_89652602_89652955_89655398
transcript_49604.nic	chr15	-	2317	2	ISM	ENSG00000166813.16	ENST00000445906.1	1375	5	-51	2239	-35	-2239	5prime_fragment	FALSE	canonical	3	35	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTTTAATGGCTAC	9989	False	NA	NA	False	NA	NA	NA	89655502	89650741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_89652955_89655398
transcript_49605.known	chr15	-	4567	19	FSM	ENSG00000166813.16	ENST00000394412.8	4567	19	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_18	27.3318089005792	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGGAAGTTTTCACTT	-12	True	NA	-15	True	AATAAA	-19	NA	89655467	89627976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89628787_89628975_89629123_89629374_89629574_89630286_89630494_89631494_89631711_89632819_89632997_89633140_89633267_89633685_89633884_89642202_89642406_89645012_89645166_89645335_89645452_89645892_89646027_89646829_89647058_89647595_89647713_89648254_89648775_89648973_89649368_89649740_89649942_89652602_89652955_89655398
transcript_49606.known	chr15	-	2708	3	FSM	ENSG00000166821.9	ENST00000300056.8	2708	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTGTCTGTGAGTG	26	False	89690780	-3	True	AATAAA	-14	NA	89690754	89681534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89683949_89686430_89686547_89690576
transcript_49608.known	chr15	-	905	2	FSM	ENSG00000166821.9	ENST00000559170.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATGTGGGCAGAGATG	-3	True	NA	NA	False	NA	NA	NA	89690783	89683250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89683949_89690576
transcript_49609.known	chr15	-	978	3	FSM	ENSG00000166821.9	ENST00000561257.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTGAAAGGAAAAAAT	118	False	NA	-28	True	AATGAA	-2	NA	89690662	89683079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89683856_89686430_89686547_89690576
transcript_49610.known	chr15	+	1886	3	FSM	ENSG00000140527.15	ENST00000558000.1	1886	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGTTTAATGGAAAAAC	24	False	NA	NA	False	AATAAA	-18	NA	89690843	89704478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89690858_89701706_89702050_89702949
transcript_49611.known	chr15	-	3813	21	FSM	ENSG00000166825.15	ENST00000560137.2	3813	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	3.04795013082563	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGACTCATTACTAAACT	8751	False	89814877	1	True	AATAAA	-15	NA	89814864	89784894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89785502_89790459_89790542_89790952_89791094_89792159_89792328_89792451_89792563_89793034_89793127_89797574_89797723_89799259_89799316_89799425_89799560_89801110_89801188_89801434_89801608_89803238_89803305_89803441_89803508_89803646_89803791_89803888_89804003_89804252_89804408_89804490_89804618_89805077_89805218_89805320_89805464_89805969_89806946_89814771
transcript_49613.known	chr15	-	738	7	FSM	ENSG00000157823.17	ENST00000558011.5	738	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	214.935390809011	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTTGAGCCTTAGAAG	2	True	NA	NA	False	NA	NA	NA	89893994	89835439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89878264_89878301_89888520_89888633_89889048_89889141_89893880
transcript_49615.known	chr15	-	578	6	FSM	ENSG00000157823.17	ENST00000558806.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	185.321774219869	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCCAGAGATTCCTC	-32	True	NA	NA	False	AAAACA	-2	NA	89894028	89835593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889137_89893880
transcript_49616.known	chr15	-	2439	10	FSM	ENSG00000250021.7	ENST00000398333.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	230.409994210535	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAAGGTTTGTTGCTGTG	63	False	NA	-11	True	AATACA	-15	NA	89912882	89834307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889141_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
transcript_49625.known	chr15	-	1262	7	FSM	ENSG00000157823.17	ENST00000423566.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	222.443750692669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAACCAGAGTCACCCGC	19	True	NA	NA	False	NA	NA	NA	89893977	89834981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89877305_89877425_89888520_89888633_89889048_89889141_89893880
transcript_49626.known	chr15	-	2658	11	FSM	ENSG00000182054.10	ENST00000330062.8	2658	11	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	49.4716080191457	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTCCTCTGCATAGTA	16	True	NA	-16	True	AATAAA	-30	NA	90102468	90083044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90090478_90090645_90091552_90091645_90102275
transcript_49630.known	chr15	-	906	8	FSM	ENSG00000185043.12	ENST00000650306.1	906	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	253.923176555108	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	208	False	NA	-18	True	AATAAA	-16	NA	90233960	90230249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90231683_90231789_90232218_90232328_90233668_90233704_90233918
transcript_4964.known	chr1	+	4347	6	FSM	ENSG00000117481.11	ENST00000474844.6	4347	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	8.08455317256309	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGTGAAGCCTGGA	4	True	NA	12	True	AATAAA	-14	NA	46340806	46365018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46340920_46344800_46345145_46346920_46347076_46352867_46353029_46360703_46360829_46361569
transcript_49641.known	chr15	+	5258	5	FSM	ENSG00000183208.13	ENST00000559204.6	5258	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.69041575982343	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAGCTATTTATATGC	-47	True	NA	NA	False	AGTAAA	-23	NA	90234197	90245811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90234293_90234521_90234597_90236062_90236182_90238491_90238549_90240899
transcript_49651.known	chr15	+	1340	3	FSM	ENSG00000182768.9	ENST00000379095.5	1340	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	783.5	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTTGGTGCTCTTTG	0	True	NA	15	True	AATAAA	-17	NA	90265671	90272211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90265877_90266287_90266399_90271187
transcript_49659.known	chr15	-	1141	7	FSM	ENSG00000185043.12	ENST00000328649.11	1141	7	0	0	0	0	multi-exon	FALSE	canonical	3	459	junction_2	37.446257786623	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCTGAAGAATTAAAAAC	-11	True	NA	-2	True	AGTAAA	-16	NA	90233941	90229974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
transcript_49660.known	chr15	-	1096	7	FSM	ENSG00000185043.12	ENST00000612800.1	1096	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	194.820786593446	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTGACATGAGATACAC	10	True	NA	-14	True	AATAAA	-20	NA	90234047	90230245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232448_90233668_90233704_90233834
transcript_49661.known	chr15	+	2784	2	FSM	ENSG00000182768.9	ENST00000331497.3	2784	2	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATCAATTATTATTG	-13	True	NA	NA	False	ATTAAA	-16	NA	90265658	90273231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90266399_90271187
transcript_49662.known	chr15	+	3163	4	FSM	ENSG00000196391.11	ENST00000354377.8	3163	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.09120616516523	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGAAAATTTTGGCTAA	8	True	NA	31	True	TATAAA	-43	NA	90352283	90362847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90352412_90354641_90354765_90358850_90358958_90360042
transcript_49663.known	chr15	+	7205	38	FSM	ENSG00000140575.13	ENST00000268182.10	7205	38	0	0	0	0	multi-exon	TRUE	canonical	3	378	junction_16	63.0474446553932	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTTTTTCTCAGTT	-32	True	NA	19	True	AATAAA	-15	NA	90388241	90502239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662_90476819_90477066_90477231_90477664_90477890_90481959_90482101_90482196_90482282_90483360_90483594_90484219_90484353_90486029_90486133_90486953_90487090_90487494_90487583_90491332_90491546_90492544_90492712_90494712_90494836_90497231_90497341_90499994
transcript_49665.nic	chr15	+	2966	24	ISM	ENSG00000140575.13	ENST00000633485.1	5863	39	-49	24154	-44	-403	5prime_fragment	FALSE	canonical	3	378	junction_16	38.0497137746985	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGAACAGTTGTCTGATA	NA	False	NA	NA	False	AGTAAA	-18	NA	90388197	90476700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_90388397_90390773_90390874_90426109_90426267_90429588_90429667_90433718_90433796_90439331_90439400_90440501_90440616_90441505_90441685_90443393_90443479_90448572_90448737_90449558_90449644_90452774_90452939_90453131_90453293_90454427_90454553_90456151_90456316_90466000_90466092_90466268_90466437_90467449_90467593_90472839_90473011_90473714_90473799_90473895_90473968_90474063_90474134_90474484_90474694_90476662
transcript_49673.known	chr15	+	1201	2	FSM	ENSG00000140575.13	ENST00000559809.2	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTGTATGTGTG	34	False	NA	5	True	AATAAA	-28	NA	90388354	90391932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90388397_90390773
transcript_49675.nnic	chr15	-	1048	4	NNC	ENSG00000259736.1	novel	502	3	NA	NA	-47	34959	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACGGAAAACTGCTGTT	NA	False	NA	NA	False	AATAAA	-20	NA	90717188	90678033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_90678615_90713166_90713300_90714920_90715043_90716976
transcript_49676.known	chr15	-	502	3	FSM	ENSG00000259736.1	ENST00000558105.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTTTCCCATAGAGA	75	False	NA	NA	False	ATTAAA	-16	NA	90717049	90712992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90713300_90714920_90715043_90716976
transcript_49678.nnic	chr15	-	882	3	NNC	ENSG00000259736.1	novel	502	3	NA	NA	-7	34959	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACGGAAAACTGCTGTT	-24	True	NA	NA	False	AATAAA	-20	NA	90717148	90678033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_90678615_90713166_90713300_90716980
transcript_49679.nic	chr15	-	1289	2	ISM	ENSG00000259736.1	ENST00000559531.1	657	4	-62	92227	-62	759	5prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTATATCCATACAGTGG	NA	False	NA	NA	False	NA	NA	NA	90717203	90712233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_90713300_90716980
transcript_4968.known	chr1	+	4344	5	FSM	ENSG00000117481.11	ENST00000307089.7	4344	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	22.3886131772381	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGTGAGTATTAATG	-14	True	NA	NA	False	NA	NA	NA	46340788	46365152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46340920_46344800_46345145_46352867_46353029_46360703_46360829_46361569
transcript_49681.known	chr15	+	5240	22	FSM	ENSG00000197299.13	ENST00000355112.8	5240	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	28.503808871472	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCATTCTTTTGCC	-22	True	NA	NA	False	AATAAA	-16	NA	90717345	90816166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
transcript_49688.nic	chr15	+	1665	7	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-39	51039	-22	95	5prime_fragment	FALSE	canonical	3	184	junction_1	15.1510909031513	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCTCTTATTTCCCAG	-44	True	NA	NA	False	NA	NA	NA	90717323	90760917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593
transcript_4969.nic	chr1	+	1597	2	ISM	ENSG00000117481.11	ENST00000474844.6	4347	6	-120	18854	-102	790	5prime_fragment	FALSE	canonical	3	50	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTATCTACCAAATG	505	False	NA	NA	False	NA	NA	NA	46340686	46346164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_46340920_46344800
transcript_49692.nic	chr15	+	684	3	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-39	62125	-22	-129	5prime_fragment	FALSE	canonical	3	184	junction_1	23	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTAAGAGAAACTTTTTTA	-44	True	NA	NA	False	NA	NA	NA	90717323	90749831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_90717441_90747388_90747491_90749366
transcript_49693.nic	chr15	+	924	3	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-39	61885	-22	111	5prime_fragment	FALSE	canonical	3	184	junction_1	23	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTATTTTATCTTCATTT	-44	True	NA	12	True	NA	NA	NA	90717323	90750071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_90717441_90747388_90747491_90749366
transcript_49695.nnic	chr15	+	312	3	NNC	ENSG00000197299.13	novel	5033	22	NA	NA	-10	-2475	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTAAGTGTTTTGACT	-32	True	NA	7	True	AATAAA	-22	NA	90717335	90747485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_90717441_90724033_90724144_90747388
transcript_49697.nic	chr15	+	214	2	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-39	64471	-22	-2475	5prime_fragment	FALSE	canonical	3	184	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTAAGTGTTTTGACT	-44	True	NA	7	True	AATAAA	-22	NA	90717323	90747485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_90717441_90747388
transcript_49698.known	chr15	+	402	2	FSM	ENSG00000259704.3	ENST00000558221.2	430	2	26	2	10	-2	multi-exon	FALSE	canonical	3	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTCTACTCCTAAA	15	True	NA	NA	False	ATTAAA	-19	NA	90839723	90841378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90839901_90841153
transcript_49702.known	chr15	+	2737	19	FSM	ENSG00000182511.12	ENST00000328850.8	2737	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	13.2842847839928	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	0	True	NA	9	True	AATAAA	-20	NA	90884503	90895776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90884545_90885036_90885259_90885411_90885586_90886960_90887058_90887186_90887371_90889305_90889444_90889516_90889637_90889839_90889963_90890091_90890279_90890400_90890485_90890981_90891192_90891553_90891677_90892057_90892112_90892706_90892826_90893099_90893195_90893290_90893415_90893653_90893812_90893935_90894059_90895415
transcript_49705.known	chr15	+	4002	23	FSM	ENSG00000140553.18	ENST00000672480.1	4002	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	115.470050855744	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	-3	True	NA	26	True	AATAAA	-17	NA	90930179	90954093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90930256_90933976_90934144_90934338_90934550_90934943_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_49708.known	chr15	+	3252	20	FSM	ENSG00000140553.18	ENST00000418476.2	3252	20	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	34.7078028539314	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	-8	True	NA	26	True	AATAAA	-17	NA	90935284	90954093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90935376_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_4971.nnic	chr1	+	2004	16	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-562	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_5	125.07004259836	94	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393754	46413845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46405870_46405953_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_49717.known	chr15	+	855	7	FSM	ENSG00000140553.18	ENST00000553671.6	855	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	129.415888600366	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTGATATAGTTCACAAAA	-8	True	NA	NA	False	NA	NA	NA	90935284	90943084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942911
transcript_49740.known	chr15	-	457	4	FSM	ENSG00000184508.12	ENST00000561036.1	457	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	73.2438848414437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCGGCAACTGGAAGAG	2685	False	NA	NA	False	GGGGCT	-9	NA	90932476	90931336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932385
transcript_49744.known	chr15	-	1856	4	FSM	ENSG00000184508.12	ENST00000394272.8	1856	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	8.73053390247253	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTGGAAAAGCGATCA	-5	True	NA	-15	True	ATTAAA	-16	NA	90932549	90929967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932428
transcript_49745.known	chr15	-	1047	4	FSM	ENSG00000184508.12	ENST00000330334.7	1047	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	72.0293150198044	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-2	True	NA	-8	True	AATAAA	-17	NA	90932546	90930924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90931557_90931703_90931945_90932054_90932111_90932428
transcript_49746.known	chr15	-	1220	3	FSM	ENSG00000184508.12	ENST00000494993.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	9.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-8	True	NA	-8	True	AATAAA	-17	NA	90932552	90930924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90931406_90931703_90931945_90932054
transcript_49747.known	chr15	+	1730	6	FSM	ENSG00000140553.18	ENST00000471780.1	1730	6	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	21.7255609824004	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	NA	False	NA	26	True	AATAAA	-17	NA	90949352	90954093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90949444_90949653_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_49752.known	chr15	-	3072	15	FSM	ENSG00000198901.14	ENST00000394249.8	3072	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	97.9025963258735	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-2	True	NA	-3	True	AATAAA	-30	NA	90994535	90966039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90967203_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_49757.nnic	chr15	-	2664	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	-116	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	76.5434478468538	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	NA	False	NA	-3	True	AATAAA	-30	NA	90994718	90966039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_90966654_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_49759.nic	chr15	-	3136	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	64.674881033415	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	NA	False	NA	-3	True	AATAAA	-30	NA	90994718	90966039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_49760.nic	chr15	-	2577	14	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	-116	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	65.1276398118005	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	NA	False	NA	-13	True	AATAAA	-20	NA	90994718	90966049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_49761.known	chr15	-	4087	14	FSM	ENSG00000198901.14	ENST00000361188.9	4087	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	69.0223358068726	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	NA	False	NA	-40	True	AATATA	-13	NA	90995629	90966076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_49778.known	chr15	-	660	4	FSM	ENSG00000198901.14	ENST00000555791.5	660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	139.738644937214	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCTACTTCAAGAGCAAGA	48	False	NA	NA	False	AAAAAG	-19	NA	90994602	90981885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90981982_90983905_90984141_90984692_90984826_90994406
transcript_49782.known	chr15	-	728	3	FSM	ENSG00000198901.14	ENST00000556972.6	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	101	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	NA	False	NA	-13	True	AATAAA	-20	NA	90970427	90966049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90966654_90969523_90969624_90970403
transcript_49783.known	chr15	-	717	5	FSM	ENSG00000198901.14	ENST00000553494.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	123.564760348572	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGCTGTGGCCACCATT	-3	True	NA	NA	False	AAGAAA	-1	NA	90994536	90980936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90981034_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_49784.known	chr15	-	582	5	FSM	ENSG00000198901.14	ENST00000555745.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	146.402484610064	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGAGAGAAAACAGGAA	-2	True	NA	NA	False	AAAAAG	-37	NA	90994535	90981908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90981982_90982621_90982746_90984017_90984141_90984692_90984826_90994406
transcript_49785.known	chr15	-	414	4	FSM	ENSG00000198901.14	ENST00000559811.1	414	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	138.333734939176	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTGCAACTAGAAAAAGAT	33	True	NA	NA	False	NA	NA	NA	90994500	90981962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90982027_90984017_90984141_90984692_90984826_90994406
transcript_49786.known	chr15	-	2501	23	FSM	ENSG00000184056.15	ENST00000333371.8	2501	23	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_17	11.2811552072435	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGGTCGTTCTGGACA	-19	True	NA	-3	True	AATAAA	-21	NA	91022594	90998672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91016962_91017025_91017804_91017886_91022153
transcript_49787.known	chr15	-	2356	22	FSM	ENSG00000184056.15	ENST00000574755.5	2356	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	26.4832981209871	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGTTGGTCGTTCTGGA	62	False	NA	-5	True	AATAAA	-19	NA	91022513	90998674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91017804_91017886_91022153
transcript_49788.known	chr15	-	2420	22	FSM	ENSG00000184056.15	ENST00000535906.1	2420	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	26.7241726887043	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACGTTGGTCGTTCTGGA	-21	True	NA	-5	True	AATAAA	-19	NA	91022596	90998674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91016962_91017025_91022153
transcript_49795.known	chr15	+	563	4	FSM	ENSG00000214432.9	ENST00000556904.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGATTTTTGAGACTC	440	False	NA	NA	False	NA	NA	NA	91022618	91030706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_91022741_91023312_91023595_91030130_91030242_91030658
transcript_4980.nnic	chr1	+	1957	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-562	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	124.508851418815	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393754	46413845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410778_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_49803.known	chr15	+	435	1	FSM	ENSG00000278514.1	ENST00000620171.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAATGTGTGGATCTT	587	False	NA	NA	False	AATAAA	-28	NA	91022765	91023200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_91022800_91023200
transcript_49805.nnic	chr15	-	452	2	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGTTCAGCCCTCCTT	NA	False	NA	NA	False	AAGAAA	-23	NA	92163853	92163161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr15_-_92163489_92163728
transcript_49807.nic	chr15	+	1403	5	ISM	ENSG00000140557.12	ENST00000268164.8	5655	6	145	23277	-15	327	5prime_fragment	FALSE	canonical	3	32	junction_3	3.76662979332984	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATGTTATCATCAATCA	104	False	NA	2	True	AGTAAA	-16	NA	92394025	92445451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_92394163_92430048_92430112_92434246_92434376_92438352_92438611_92444635
transcript_49810.known	chr15	-	409	2	FSM	ENSG00000185442.13	ENST00000554082.1	409	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGCCTCGAGGTATTTT	-3	True	NA	NA	False	ATTAAA	-16	NA	92809884	92808843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_92809014_92809645
transcript_49812.known	chr15	+	2232	13	FSM	ENSG00000173575.22	ENST00000420239.7	2232	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7.1278015934477	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGGAGTTTTTAT	-6	True	NA	6	True	AATAAA	-17	NA	92900323	92949234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951
transcript_49814.nic	chr15	+	1147	6	ISM	ENSG00000173575.22	ENST00000420239.7	2232	13	-61	11646	-58	0	5prime_fragment	FALSE	canonical	3	19	junction_2	5.53534100123922	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTAAAAGCCAGA	3127	False	NA	NA	False	NA	NA	NA	92900262	92937588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517
transcript_49817.nic	chr15	+	891	4	ISM	ENSG00000173575.22	ENST00000625990.3	2827	18	-29	43229	-8	4704	5prime_fragment	FALSE	canonical	1	1	junction_1	12.0830459735946	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAAGTCTTTCATGGGGG	-17	True	NA	16	True	AAAAAG	-26	NA	92900312	92929089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_92900825_92924320_92924553_92927243_92927331_92929029
transcript_4982.nnic	chr1	+	1922	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-562	0	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_1	92.9575281556923	142	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393754	46413845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_49820.known	chr15	+	1740	2	FSM	ENSG00000173575.22	ENST00000627622.1	1740	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATGTGATTCATTATG	-9	True	NA	115	True	TATAAA	-21	NA	92900320	92902402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_92900825_92901166
transcript_49821.nic	chr15	+	852	6	NIC	ENSG00000272888.8	novel	556	6	NA	NA	88	0	intron_retention	FALSE	canonical	3	159	junction_2	382.191261019924	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	70	False	NA	19	True	AATAAA	-2	NA	92883102	92898072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_92883187_92883584_92883779_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_49822.nnic	chr15	+	1105	6	ISM	ENSG00000173575.22	ENST00000420239.7	2232	13	-11	11638	-8	8	5prime_fragment	FALSE	canonical	3	19	junction_2	5.53534100123922	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGCCAGAAGACCTGT	-17	True	NA	NA	False	NA	NA	NA	92900312	92937596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517
transcript_49824.known	chr15	+	802	5	FSM	ENSG00000272888.8	ENST00000556895.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_1	133.139729232112	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCACACTAACCCAGATA	12	False	NA	-78	True	AAGAAA	-2	NA	92882861	92897975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_92883187_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_49826.nic	chr15	+	715	5	NIC	ENSG00000272888.8	novel	1776	4	NA	NA	388	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	397.062652486985	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	94	False	NA	19	True	AATAAA	-2	NA	92883402	92898072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_92883544_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_49827.nnic	chr15	+	761	5	NNC	ENSG00000272888.8	novel	1776	4	NA	NA	-393	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	408.618021506639	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	879	False	NA	19	True	AATAAA	-2	NA	92884930	92898072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_92885118_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_49831.known	chr15	+	796	4	FSM	ENSG00000140563.16	ENST00000561608.5	796	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.90668171555645	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGCATTCCTTAAAA	-1	True	NA	NA	False	NA	NA	NA	94231571	94314344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_94231665_94278153_94278264_94298200_94298731_94314281
transcript_49834.known	chr15	+	1439	1	FSM	ENSG00000277654.6	ENST00000565166.3	1439	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCCCATCAGAGGCCGG	12	False	NA	NA	False	NA	NA	NA	94855473	94856912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_94855500_94856900
transcript_49835.known	chr15	-	1358	3	FSM	ENSG00000258433.2	ENST00000554649.2	1358	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCAAGGTGACCAAAACA	NA	False	NA	NA	False	AAGAAA	-2	NA	95047088	95034107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_95034745_95035383_95035739_95046722
transcript_49836.nnic	chr15	-	877	2	NIC	ENSG00000258433.2	novel	1354	4	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGTCATGTGTTCAGA	NA	False	NA	NA	False	AATAAA	-21	NA	95047078	95034223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_95034745_95046722
transcript_49838.known	chr15	-	3787	4	FSM	ENSG00000248441.8	ENST00000555332.6	3787	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGAAAGACTATTTATC	147	False	NA	NA	False	AATAAA	-20	NA	95326979	95274039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_95277377_95288301_95288469_95289421_95289555_95326829
transcript_49839.known	chr15	-	1135	4	FSM	ENSG00000258489.4	ENST00000668885.1	1135	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTGTTTCTGTGATTT	NA	False	NA	NA	False	AATAAA	-29	NA	95493843	95463586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_95464387_95464719_95464810_95491498_95491550_95493649
transcript_49840.known	chr15	-	1015	3	FSM	ENSG00000258489.4	ENST00000554412.3	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTTAGTTGTTTCTGT	1	True	NA	NA	False	AATAAA	-24	NA	95493779	95463591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_95464387_95464719_95464810_95493649
transcript_49845.known	chr15	+	1149	5	FSM	ENSG00000259485.2	ENST00000656523.1	1149	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.79021822544144	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACACACTTGTGCTTT	NA	False	NA	NA	False	AATAAA	-22	NA	97295836	97432089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_97296324_97411191_97411279_97429048_97429205_97429769_97429890_97431790
transcript_49850.nnic	chr15	+	787	5	NNC	ENSG00000259485.2	novel	1149	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.53325958665968	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295847	97432086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_97295976_97411191_97411279_97429048_97429205_97429769_97429890_97431790
transcript_49852.known	chr15	+	956	4	FSM	ENSG00000259485.2	ENST00000655490.1	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5.90668171555645	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACACACTTGTGCTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	97295874	97432090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_97296324_97411191_97411279_97429769_97429890_97431790
transcript_49854.nnic	chr15	+	682	4	NNC	ENSG00000259485.2	novel	956	4	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.2192186706253	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295796	97432086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_97295976_97411191_97411279_97429769_97429890_97431790
transcript_49855.known	chr15	+	798	3	FSM	ENSG00000259485.2	ENST00000659377.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295908	97432086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_97296324_97411191_97411279_97431790
transcript_49856.nnic	chr15	+	1255	3	NNC	ENSG00000259485.2	novel	565	3	NA	NA	-93	18928	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	9	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTATACATGTATATG	NA	False	NA	NA	False	AATAAA	-31	NA	97295743	97451022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_97296324_97411191_97411279_97450434
transcript_49857.nnic	chr15	+	945	3	NIC	ENSG00000259485.2	novel	956	4	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	10	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295794	97432086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_97296324_97429769_97429890_97431790
transcript_49858.known	chr15	-	899	4	FSM	ENSG00000259611.2	ENST00000664520.1	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAAGTGCAGGGTCTG	NA	False	NA	NA	False	GATAAA	-17	NA	98088477	98082980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_98083450_98083833_98083901_98085621_98085775_98088267
transcript_49859.known	chr15	-	334	2	FSM	ENSG00000259424.2	ENST00000560221.1	334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGAGATAAGAAGTGGTT	3465	False	NA	-11	True	AATAAA	-35	NA	98647371	98646950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_98647194_98647280
transcript_49861.known	chr15	+	459	1	FSM	ENSG00000278022.1	ENST00000618697.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTTTGATTAGGCTTT	8289	False	NA	NA	False	AATAAA	-14	NA	98660209	98660668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_98660200_98660700
transcript_49862.known	chr15	-	995	5	FSM	ENSG00000183571.11	ENST00000378919.6	995	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTAGCTTCAGTTATGG	-8	True	NA	NA	False	NA	NA	NA	99005562	98968279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_98968698_98969424_98969652_98971035_98971159_99001186_99001280_99005428
transcript_49863.known	chr15	+	1008	3	FSM	ENSG00000278090.3	ENST00000665845.1	1008	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACATTTGTGTATGTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	99014709	99031050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99014814_99024599_99024674_99030220
transcript_49872.known	chr15	+	967	10	FSM	ENSG00000168904.15	ENST00000561276.5	967	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	30.2177284240744	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTAGTTTTGTGGCTT	2	True	NA	NA	False	NA	NA	NA	99251519	99386035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99251542_99255897_99255974_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_49875.known	chr15	+	5852	10	FSM	ENSG00000168904.15	ENST00000301981.8	5852	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	12.6227308191743	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGAGTTTTGTGGTGTTT	3	True	NA	NA	False	NA	NA	NA	99251480	99390729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_49885.known	chr15	+	1235	9	FSM	ENSG00000168904.15	ENST00000447360.6	1235	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	28.0131107697806	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	27	True	NA	24	True	AATATA	-20	NA	99251504	99386296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99386029
transcript_49886.nnic	chr15	+	1252	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_5	31.5228092022269	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	NA	False	NA	24	True	AATATA	-20	NA	99251440	99386296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_49887.nic	chr15	+	1418	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	27.4451156856735	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	NA	False	NA	24	True	AATATA	-20	NA	99251440	99386296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_99251542_99255897_99256126_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_49908.nnic	chr15	-	1084	4	NNC	ENSG00000183060.16	novel	2710	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	23.4710223230453	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-11	True	NA	-11	True	AATAAA	-24	NA	99733415	99727404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_99727725_99729328_99729732_99731717_99732008_99733344
transcript_49909.known	chr15	-	2847	5	FSM	ENSG00000183060.16	ENST00000332728.8	2847	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.69740215917033	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	-40	False	NA	-7	True	AATAAA	-28	NA	99733444	99727400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99729732_99731172_99731199_99731717_99732008_99732928_99733029_99733344
transcript_49911.nic	chr15	-	2714	4	NIC	ENSG00000183060.16	novel	2885	6	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	12.4988888395018	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-11	True	NA	-11	True	AATAAA	-24	NA	99733415	99727404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_99729732_99731172_99731199_99731717_99732008_99733344
transcript_49916.nnic	chr15	-	794	3	NNC	ENSG00000183060.16	novel	2710	3	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-11	True	NA	-11	True	AATAAA	-24	NA	99733415	99727404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_99727725_99729328_99729732_99733344
transcript_49917.known	chr15	-	2672	3	FSM	ENSG00000183060.16	ENST00000409796.5	2672	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	26.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	65	False	NA	-11	True	AATAAA	-24	NA	99733339	99727404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99729732_99731717_99732008_99733284
transcript_49918.known	chr15	-	2710	3	FSM	ENSG00000183060.16	ENST00000684762.1	2710	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	11	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-33	True	NA	-11	True	AATAAA	-24	NA	99733437	99727404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99729732_99731717_99732008_99733344
transcript_49926.known	chr15	-	2431	2	FSM	ENSG00000183060.16	ENST00000545021.2	2431	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	-40	False	NA	-7	True	AATAAA	-28	NA	99733444	99727400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99729732_99733344
transcript_49929.known	chr15	+	804	4	FSM	ENSG00000259363.6	ENST00000653567.1	804	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTGTCTATTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	99805927	99839220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99805952_99808146_99808303_99812972_99813087_99838710
transcript_49930.known	chr15	+	760	4	FSM	ENSG00000259363.6	ENST00000560059.6	760	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTACTTTAGGTGAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	99806984	99839086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99807099_99808146_99808303_99812972_99813087_99838710
transcript_49931.known	chr15	+	860	4	FSM	ENSG00000259363.6	ENST00000661885.1	860	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAGACATTACTTTAGG	NA	False	NA	NA	False	AATAAA	-17	NA	99806629	99839080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99806850_99808146_99808303_99812972_99813087_99838710
transcript_49936.nnic	chr15	-	586	2	NNC	ENSG00000154227.14	novel	448	2	NA	NA	61937	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGACTCAGACTGGTCA	NA	False	NA	NA	False	AATATA	-26	NA	100417559	100402510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_100402866_100417328
transcript_49942.known	chr15	+	4926	6	FSM	ENSG00000183475.13	ENST00000332783.12	4926	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.1442284397967	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGGAGTTGTATTTTA	24	True	NA	19	True	ATTAAA	-22	NA	100602588	100651701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436_100630043_100648322
transcript_49943.nnic	chr15	-	1755	6	NNC	ENSG00000140471.17	novel	1612	5	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17.3158886575307	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGTCAGCTTTTTGT	-5	True	NA	NA	False	AAAAAG	-19	NA	100602210	100573476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_100574242_100574986_100575129_100576540_100576703_100580262_100580353_100580443_100580946_100602116
transcript_49945.known	chr15	+	1694	5	FSM	ENSG00000183475.13	ENST00000343276.4	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.08431365765238	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGATTTCATAAAAAT	44	True	NA	NA	False	AATAAA	-19	NA	100602608	100630209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436
transcript_49946.nic	chr15	-	1593	5	NIC	ENSG00000140471.17	novel	1612	5	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_4	12.2065556157337	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGTCAGCTTTTTGT	-5	True	NA	NA	False	AAAAAG	-19	NA	100602210	100573476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602116
transcript_49948.known	chr15	-	1196	5	FSM	ENSG00000140471.17	ENST00000560133.5	1196	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.1518949390439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGTCAGCTTTTTGT	1	True	NA	NA	False	AAAAAG	-19	NA	100602174	100573476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_100574242_100574986_100575129_100580262_100580353_100580800_100580946_100602120
transcript_49951.nnic	chr15	-	747	3	Fusion	ENSG00000259755.1_ENSG00000259376.1	novel	720	3	NA	NA	7933	1562	multi-exon	FALSE	canonical	0	0	junction_2	11	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCGTTAAACCTGTTGG	NA	False	NA	-12	True	ATTAAA	-18	NA	101078133	101049169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_101049665_101050633_101050780_101078027
transcript_49953.known	chr15	-	4662	3	FSM	ENSG00000131873.7	ENST00000254190.4	4662	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	26.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAAAGTTTTTCAAGTT	-1	True	NA	-19	True	AGTAAA	-15	NA	101252048	101175726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101178981_101235081_101235578_101251136
transcript_49956.known	chr15	-	1439	7	FSM	ENSG00000131871.15	ENST00000398226.7	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	344.908079541975	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCAGGAGTGTCCA	8	True	NA	NA	False	NA	NA	NA	101277450	101270816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101271646_101272763_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_49961.known	chr15	-	1218	6	FSM	ENSG00000131871.15	ENST00000526049.6	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_3	89.0721056223552	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTACTTATTTCTCT	-27	True	NA	-8	True	ATTAAA	-21	NA	101277485	101272190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_49962.known	chr15	-	856	4	FSM	ENSG00000131871.15	ENST00000527833.5	856	4	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_1	99.7095782761115	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCTGCCAATCTTCAGA	17	True	NA	NA	False	NA	NA	NA	101277441	101274167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101274682_101275254_101275362_101276540_101276676_101277341
transcript_49963.known	chr15	-	556	3	FSM	ENSG00000131871.15	ENST00000529968.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_1	1.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATCAAGAAGAATACACG	-42	True	NA	NA	False	NA	NA	NA	101277500	101275099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101275362_101276540_101276676_101277341
transcript_49964.known	chr15	-	355	2	FSM	ENSG00000131871.15	ENST00000534014.1	355	2	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAATA	5	True	NA	NA	False	AGTAAA	-35	NA	101277453	101276432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101276676_101277341
transcript_49981.known	chr15	-	556	6	FSM	ENSG00000131876.18	ENST00000394082.8	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	1316.29033271539	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGTGTTAGCAAAGT	88	False	NA	NA	False	NA	NA	NA	101295203	101281653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101295096
transcript_49984.known	chr15	-	506	5	FSM	ENSG00000131876.18	ENST00000540017.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	1402.32752950229	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATAATAGGCCCTCTTG	-22	True	NA	NA	False	NA	NA	NA	101295255	101281708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101295096
transcript_49988.known	chr15	-	1052	9	FSM	ENSG00000131876.18	ENST00000254193.11	1052	9	0	0	0	0	multi-exon	FALSE	canonical	3	2311	junction_3	231.296887138586	20083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-15	True	NA	-9	True	AATAAA	-22	NA	101295248	101281509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286213_101286294_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_49989.known	chr15	-	924	8	FSM	ENSG00000131876.18	ENST00000559309.5	924	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	980.736437165293	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	87	False	NA	-13	True	AATAAA	-18	NA	101295204	101281513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_49990.known	chr15	-	2108	7	FSM	ENSG00000131876.18	ENST00000558036.5	2108	7	0	0	0	0	multi-exon	FALSE	canonical	3	2560	junction_2	163.346683127907	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	9	False	NA	-13	True	AATAAA	-18	NA	101295282	101281513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_49991.known	chr15	-	588	6	FSM	ENSG00000131876.18	ENST00000560856.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1341.33590125665	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTCCAGAAAGTGAAACT	11	True	NA	NA	False	TATAAA	-22	NA	101295222	101286931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101287011_101287655_101287703_101289813_101289923_101291961_101292041_101293024_101293173_101295096
transcript_49993.known	chr15	-	1353	6	FSM	ENSG00000184277.13	ENST00000559107.5	1353	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	111.575266076313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	-5	True	NA	NA	False	NA	NA	NA	101652384	101632976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_49994.known	chr15	-	1395	6	FSM	ENSG00000184277.13	ENST00000333202.8	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	94.3029161797237	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGCCTGTTTTCTA	-2	True	NA	63	True	AATAAA	-17	NA	101652381	101641847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_49997.known	chr15	-	863	4	FSM	ENSG00000184277.13	ENST00000559024.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	96.713781621626	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCCTCTTCCAAGGTAA	-3	True	NA	NA	False	NA	NA	NA	101652382	101646384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101646900_101650003_101650162_101651695_101651774_101652270
transcript_49998.known	chr15	-	1329	5	FSM	ENSG00000184277.13	ENST00000347970.7	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	37.3162163140906	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCTGTTTTCTATA	-12	True	NA	65	True	AATAAA	-19	NA	101652391	101641845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_5.known	ERCC-00013	+	792	1	FSM	ERCC-00013A	EF011062	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00013_+_0_800
transcript_50.known	ERCC-00112	+	1120	1	FSM	ERCC-00112A	DQ459422	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00112_+_0_1100
transcript_50002.known	chr15	-	503	3	FSM	ENSG00000259658.5	ENST00000558592.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	101745710	101737098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101737370_101744440_101744597_101745634
transcript_50003.known	chr15	-	517	3	FSM	ENSG00000259658.5	ENST00000635726.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	101746870	101737098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101737370_101744440_101744597_101746780
transcript_50005.known	chr15	+	1187	3	FSM	ENSG00000248893.3	ENST00000507796.3	1187	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	101954884	101956412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_101955246_101955484_101955690_101955791
transcript_50006.known	chr15	-	712	3	FSM	ENSG00000259553.6	ENST00000561145.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAAGTCGCCCAGTG	NA	False	NA	NA	False	GATAAA	-6	NA	101961408	101959860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101959983_101960294_101960399_101960922
transcript_50014.known	chr15	+	427	3	FSM	ENSG00000185596.16	ENST00000559884.5	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	137	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAACTCACACTTCAT	-4	True	NA	NA	False	TATAAA	-24	NA	101961602	101966755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_101961642_101966069_101966224_101966521
transcript_50016.known	chr15	+	1394	10	FSM	ENSG00000185596.16	ENST00000560956.1	1394	10	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_6	88.0530143341688	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTCCATGACACCTTCC	4468	False	NA	NA	False	NA	NA	NA	101966074	101976266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_101966224_101972582_101972695_101972900_101973048_101973219_101973353_101973591_101973728_101973904_101974107_101974194_101974354_101975012_101975166_101975923_101975993_101976132
transcript_50017.known	chr16	+	1054	2	FSM	ENSG00000231439.4	ENST00000527434.1	1054	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	22909	25123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23086_24245
transcript_50027.known	chr16	+	1085	5	FSM	ENSG00000161981.11	ENST00000383018.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_2	50.8004675175337	5704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGCTCACAGTGGC	-30	True	NA	13	True	AATAAA	-24	NA	53828	57668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085
transcript_50028.known	chr16	+	1130	4	FSM	ENSG00000161981.11	ENST00000466183.1	1130	4	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	51.0838091331838	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTGAAAAGTAGAAAGCCA	1101	False	NA	11	True	AATAAA	-16	NA	54959	57444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_55550_55776_55883_56538_56614_57085
transcript_50029.known	chr16	+	329	3	FSM	ENSG00000161981.11	ENST00000493672.1	329	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	467	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAGCTGGTAAGTGGA	40	True	NA	NA	False	NA	NA	NA	53898	55871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_54059_55458_55550_55793
transcript_50033.nnic	chr16	+	819	2	Genic_Genomic	ENSG00000278995.1	novel	279	1	NA	NA	-1960	23	multi-exon	FALSE	canonical	3	8	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGCTTGGTGGT	1046	False	NA	0	True	AATAAA	-16	NA	72722	74984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr16_+_72937_74379
transcript_50034.known	chr16	+	279	1	FSM	ENSG00000278995.1	ENST00000624755.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAAACAGCCTTGTTGC	3006	False	NA	-23	True	NA	NA	NA	74682	74961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_74700_75000
transcript_50035.known	chr16	+	1193	5	FSM	ENSG00000103152.12	ENST00000219431.4	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	223.804602276182	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCCTTAGCCAGA	20	True	NA	24	True	AATAAA	-15	NA	78256	85842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78334_79138_79332_79424_79701_83051_83257_85400
transcript_50037.known	chr16	+	1036	4	FSM	ENSG00000103152.12	ENST00000356432.8	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	29.2612751298063	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTAGCCAGAGCTC	-12	True	NA	28	True	AATAAA	-19	NA	78224	85846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78334_79424_79701_83051_83257_85400
transcript_50038.known	chr16	+	513	3	FSM	ENSG00000188536.13	ENST00000397806.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	12	False	NA	NA	False	AATAAA	-17	NA	172889	173710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_172959_173124_173330_173471
transcript_50039.known	chr16	+	576	3	FSM	ENSG00000188536.13	ENST00000251595.11	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.5	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	-2	True	NA	NA	False	AATAAA	-17	NA	172875	173710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_173008_173124_173330_173471
transcript_50041.known	chr16	+	577	3	FSM	ENSG00000206172.8	ENST00000320868.9	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	0	True	NA	NA	False	AATAAA	-17	NA	176679	177522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_176812_176928_177134_177282
transcript_50042.known	chr16	+	504	3	FSM	ENSG00000206172.8	ENST00000397797.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	24	False	NA	NA	False	AATAAA	-17	NA	176703	177522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_176763_176928_177134_177282
transcript_50043.known	chr16	+	528	3	FSM	ENSG00000086506.3	ENST00000199708.3	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0.5	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTGCCGTGCTCTCT	-10	True	NA	9	True	AGTAAA	-17	NA	180458	181179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_180582_180665_180871_180979
transcript_50044.known	chr16	-	547	1	FSM	ENSG00000268836.1	ENST00000595428.1	547	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTGTTTTTTGCTTTTT	NA	False	NA	-2	True	CATAAA	-18	NA	186294	185747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_185700_186300
transcript_50059.known	chr16	-	1520	11	FSM	ENSG00000007392.17	ENST00000629543.2	1520	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	185.28356645963	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCCTCTGCGTAGAG	-19	True	NA	-16	True	AATAAA	-38	NA	229450	188974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_50064.known	chr16	-	989	11	FSM	ENSG00000007392.17	ENST00000418978.5	989	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	232.200538328403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGCGTCGGAGGCGGTCA	5305	False	NA	NA	False	NA	NA	NA	229374	190121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
transcript_50065.known	chr16	-	1504	10	FSM	ENSG00000007392.17	ENST00000397783.5	1504	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	140.795973567569	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTGCGTAGAGGCTT	5216	False	NA	-12	True	AATAAA	-42	NA	229463	188970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_50069.known	chr16	-	1434	10	FSM	ENSG00000007392.17	ENST00000293872.13	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_9	70.1465837363199	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-18	True	NA	-31	True	AATAAA	-23	NA	229449	188989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_50076.known	chr16	-	1211	10	FSM	ENSG00000007392.17	ENST00000419516.5	1211	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	195.092254214054	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTCTGGTGGGGATG	-3	True	NA	NA	False	NA	NA	NA	229434	189895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_50085.known	chr16	-	2097	9	FSM	ENSG00000007392.17	ENST00000337351.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_8	72.4530020081984	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	5216	False	NA	-10	True	AATAAA	-44	NA	229463	188968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_50095.known	chr16	-	423	3	FSM	ENSG00000007392.17	ENST00000442701.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	273	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTAGTTTAAAATTT	NA	False	NA	-37	True	AATACA	-6	NA	190549	189114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_189340_189946_190136_190540
transcript_50105.known	chr16	+	2901	13	FSM	ENSG00000167930.17	ENST00000301678.7	2901	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	248.44762470634	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGTGCGTCTGCCTGT	28	False	NA	39	True	NA	NA	NA	234845	266120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_234858_249548_249655_254387_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_50107.nic	chr16	+	2908	13	NIC	ENSG00000167930.17	novel	2909	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	90	junction_4	230.202567801105	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	-23	True	NA	15	True	AATAAA	-23	NA	234794	266096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259995_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_50113.nic	chr16	+	1155	6	NIC	ENSG00000167930.17	novel	984	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	15	junction_5	344.238870553574	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGAATCAAGGAATCT	-23	True	NA	NA	False	AATAAA	-17	NA	234794	260788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_260412
transcript_50116.known	chr16	+	964	6	FSM	ENSG00000242173.10	ENST00000219409.8	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	4.58693797647189	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTCGTCTCTTT	-7	True	NA	14	True	ATTAAA	-22	NA	280590	283010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_282531_282614
transcript_50118.known	chr16	+	680	6	FSM	ENSG00000242173.10	ENST00000414650.1	680	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.9699718221417	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAACCCCCAGTCCGTGTC	174	False	NA	NA	False	NA	NA	NA	280854	282810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_280934_281745_281926_282024_282109_282296_282374_282466_282531_282614
transcript_50120.known	chr16	+	432	3	FSM	ENSG00000167930.17	ENST00000447499.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGGTGAGCCTCGGCT	12	True	NA	NA	False	NA	NA	NA	234829	254674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_234858_249548_249659_254380
transcript_50121.known	chr16	+	739	4	FSM	ENSG00000167930.17	ENST00000421000.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_3	403.367767125183	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGAATCAAGGAATCT	491	False	NA	NA	False	AATAAA	-17	NA	254627	260788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_254682_259482_259600_259968_260161_260412
transcript_50122.known	chr16	+	583	5	FSM	ENSG00000167930.17	ENST00000419173.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	382.607501233313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATCCAAGATGTTCTT	0	True	NA	NA	False	TATAAA	-6	NA	234817	259521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_234858_249548_249655_253832_253930_254380_254682_259482
transcript_5013.nnic	chr1	+	1156	9	NNC	ENSG00000117480.16	novel	527	3	NA	NA	-552	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	127.758316754722	74	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393764	46413845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46393862_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_50132.known	chr16	-	800	6	FSM	ENSG00000086504.18	ENST00000441883.5	800	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	720.756824456071	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTCAGAGCCGGCGG	5735	False	NA	NA	False	NA	NA	NA	370432	367723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370361
transcript_50140.known	chr16	-	1512	5	FSM	ENSG00000086504.18	ENST00000483764.5	1512	5	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	521.5363721736	2631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-2	True	NA	-11	True	AGTAAA	-26	NA	370509	367383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_367783_368327_368415_368500_369221_369930_370226_370498
transcript_50141.known	chr16	-	1467	4	FSM	ENSG00000086504.18	ENST00000469744.1	1467	4	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_3	75.2374020462341	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGGAGCGAGTAAAGT	0	True	NA	-54	True	NA	NA	NA	370234	367426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_367783_368327_368415_368500_369221_369930
transcript_50142.known	chr16	-	865	6	FSM	ENSG00000086504.18	ENST00000389675.6	865	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	724.456320284391	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACAGATCCCGGGGAG	-2	True	NA	NA	False	NA	NA	NA	370509	367612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370484
transcript_50143.known	chr16	-	722	5	FSM	ENSG00000086504.18	ENST00000447696.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	683.544210347802	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGGTGAGTGTGTGAG	5	True	NA	NA	False	NA	NA	NA	370502	368334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_368415_368500_368636_369067_369221_369930_370226_370443
transcript_50144.known	chr16	-	2346	13	FSM	ENSG00000129925.11	ENST00000250930.7	2346	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	181.327435565854	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTTCCTCCTACTGAG	-13	True	NA	-13	True	AATAAA	-16	NA	381978	371863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_372284_372610_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377806_381907
transcript_50148.known	chr16	+	1012	9	FSM	ENSG00000242612.7	ENST00000424398.6	1012	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.741374914752	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAACACTCAGCTATT	-4	True	NA	NA	False	NA	NA	NA	401881	411976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_402044_404955_405025_406345_406362_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_50150.known	chr16	+	1551	9	FSM	ENSG00000242612.7	ENST00000219481.10	1551	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	42.3489964461969	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATCGTTTAGGGGTTGT	-1	True	NA	13	True	ATTAAA	-16	NA	401884	412482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_50173.known	chr16	+	1167	6	FSM	ENSG00000103202.13	ENST00000448828.5	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	1062.96464663694	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTTTTGCACACCCA	3	True	NA	0	True	AGTAAA	-1	NA	397198	400734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398207_398395_398989_399124_399378_399481_399626_399740_400218
transcript_50183.known	chr16	+	1232	5	FSM	ENSG00000103202.13	ENST00000397722.5	1232	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	972.644944211401	2517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCAGTTCCATAACGT	-2	True	NA	12	True	AGTAAA	-13	NA	396724	400746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397080_398989_399124_399378_399481_399626_399740_400218
transcript_50186.known	chr16	+	966	5	FSM	ENSG00000103202.13	ENST00000433358.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	939.572608955795	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	2	True	NA	22	True	ATTAAA	-18	NA	397236	400648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400108
transcript_50188.known	chr16	+	1000	5	FSM	ENSG00000103202.13	ENST00000219479.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	3	1786	junction_1	233.536934980315	3251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	3	True	NA	20	True	AGTAAA	-21	NA	397198	400754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400218
transcript_50190.known	chr16	+	1652	5	FSM	ENSG00000103202.13	ENST00000460297.1	1652	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	936.60647419287	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGCCCAGCACATGG	12	False	NA	7	True	ATTAAA	-3	NA	397207	400633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398207_399124_399378_399481_399626_399740_400218
transcript_50191.known	chr16	+	985	5	FSM	ENSG00000103202.13	ENST00000450036.1	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	959.771164132368	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAACCTGCCTGTCCCAA	450	False	NA	NA	False	NA	NA	NA	397741	400416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_398180_398989_399124_399378_399481_399626_399740_400218
transcript_50193.known	chr16	+	904	4	FSM	ENSG00000103202.13	ENST00000621774.4	904	4	0	0	0	0	multi-exon	TRUE	canonical	2	83	junction_2	882.056813488917	2322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	-4	True	NA	19	True	AGTAAA	-20	NA	397191	400753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398989_399124_399626_399740_400218
transcript_50197.known	chr16	+	2958	11	FSM	ENSG00000007541.17	ENST00000321878.10	2958	11	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_9	31.1576635837798	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCAGGCTCGGTCCCGGGT	0	True	NA	18	True	AATAAA	-19	NA	569967	584109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133_576255_578378_578506_578784_578939_579068_579181_580182_580264_580857_580973_582247_582310_582882
transcript_50198.known	chr16	+	1289	4	FSM	ENSG00000282907.1	ENST00000635107.1	1289	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	102.931476667193	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACTGGGGTGGAGCCC	511	False	NA	NA	False	NA	NA	NA	569460	576257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_569796_574065_574764_575838_575971_576133
transcript_50199.known	chr16	+	2052	4	FSM	ENSG00000007541.17	ENST00000422307.6	2052	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	11.7756811551038	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGCTCTTATCCTTTA	8	True	NA	25	True	TATAAA	-33	NA	569975	577234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133
transcript_502.known	SIRV6	+	485	4	FSM	SIRV6A	SIRV609	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	16794	junction_3	6208.15930852294	8862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1137	2120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
transcript_50202.known	chr16	+	2112	3	FSM	ENSG00000007541.17	ENST00000470411.2	2112	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	10	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAAGTCTCTTCCTGCTGC	94	False	NA	8	True	TATAAA	-16	NA	570061	577217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_570097_574065_574764_575838
transcript_50203.known	chr16	+	2096	2	FSM	ENSG00000257108.2	ENST00000424439.3	2096	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	-16	True	NA	NA	False	AATAAA	-16	NA	567004	569495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_567076_567470
transcript_50204.known	chr16	+	2071	2	FSM	ENSG00000257108.2	ENST00000540585.1	2071	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	-16	True	NA	NA	False	AATAAA	-16	NA	567004	569495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_567076_567495
transcript_50205.known	chr16	-	797	6	FSM	ENSG00000130731.16	ENST00000301686.13	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_4	221.560826862512	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	29	True	NA	-18	True	AATAAA	-18	NA	636305	634429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_635611_635775_636093
transcript_50208.known	chr16	-	755	6	FSM	ENSG00000130731.16	ENST00000456420.6	755	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	354.823110859482	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACAGCCCCACCCAGTC	95	False	NA	-101	True	NA	NA	NA	636239	634512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_635611_635775_636093
transcript_50209.known	chr16	-	588	5	FSM	ENSG00000130731.16	ENST00000568077.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_4	320.420036826663	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	3	True	NA	-90	True	NA	NA	NA	636331	634501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_636093
transcript_50211.known	chr16	-	518	5	FSM	ENSG00000130731.16	ENST00000564039.1	518	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	434.121742717409	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTGATCTTCCGG	56	False	NA	NA	False	NA	NA	NA	636278	634625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_636093
transcript_50213.known	chr16	-	726	5	FSM	ENSG00000130731.16	ENST00000397666.6	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	366.778117531567	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	32	True	NA	-18	True	AATAAA	-18	NA	636302	634429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_635280_635341_635611_635775_636093
transcript_50215.known	chr16	-	604	4	FSM	ENSG00000130731.16	ENST00000397664.8	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	448.718421977772	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGGCTTGCTGGTGTC	-17	True	NA	-26	True	AATAAA	-10	NA	636351	634437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_635280_635341_636093
transcript_50216.known	chr16	-	558	4	FSM	ENSG00000130731.16	ENST00000397665.6	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	447.460240319368	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGACCTTGTGGACGACA	44	False	NA	-114	True	NA	NA	NA	636290	634525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_635611_635775_636093
transcript_50217.known	chr16	-	544	3	FSM	ENSG00000130731.16	ENST00000338401.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	535.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTCTGCCCCACC	-8	True	NA	-17	True	AATAAA	-19	NA	636342	634428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_636093
transcript_50219.nnic	chr16	+	849	5	NIC	ENSG00000172366.20	novel	1050	6	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	165.55871315035	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	-16	True	NA	23	True	AATAAA	-15	NA	641916	648474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_642044_646471_646609_647416_647545_647782_647885_648119
transcript_5022.nnic	chr1	+	756	4	NNC	ENSG00000117480.16	novel	2042	15	NA	NA	-557	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	190.79191690309	109	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393759	46413845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46393862_46412142_46412252_46413074_46413221_46413446
transcript_50220.known	chr16	+	1050	6	FSM	ENSG00000172366.20	ENST00000491999.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	139.308291210538	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	22	True	NA	23	True	AATAAA	-15	NA	641845	648474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_642044_642119_642250_646471_646609_647416_647545_647782_647885_648119
transcript_50221.known	chr16	+	1379	5	FSM	ENSG00000172366.20	ENST00000615744.4	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	165.25283658685	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCTCCAGGCTAAT	13	True	NA	-14	True	GGGGCT	-5	NA	642450	648437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_643145_646471_646609_647416_647545_647782_647885_648119
transcript_50223.known	chr16	+	628	4	FSM	ENSG00000172366.20	ENST00000611328.4	628	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	173.395501671756	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	2351	False	NA	23	True	AATAAA	-15	NA	636902	648474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_636946_647416_647545_647782_647885_648119
transcript_50224.nnic	chr16	+	714	4	NIC	ENSG00000172366.20	novel	931	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	175.731487091971	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	-18	True	NA	23	True	AATAAA	-15	NA	641914	648474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_642044_647416_647545_647782_647885_648119
transcript_50225.known	chr16	+	931	5	FSM	ENSG00000172366.20	ENST00000307650.9	931	5	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	42.7631558704453	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	4	True	NA	23	True	AATAAA	-15	NA	641827	648474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_642044_642119_642250_647416_647545_647782_647885_648119
transcript_50227.nnic	chr16	+	1301	4	NIC	ENSG00000172366.20	novel	1379	5	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	169.65913539277	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	-9	True	NA	23	True	AATAAA	-15	NA	642428	648474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_643145_647416_647545_647782_647885_648119
transcript_50232.known	chr16	+	1728	1	FSM	ENSG00000172366.20	ENST00000575894.1	1728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	3844	False	NA	23	True	AATAAA	-15	NA	646746	648474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_646700_648500
transcript_50233.known	chr16	+	5589	41	FSM	ENSG00000161996.19	ENST00000549091.5	5589	41	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	24.8430573802823	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCATTGTTGCACTGG	-40	True	NA	36	True	AATAAA	-21	NA	649324	667833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_649427_649762_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651826_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772_655890_656301_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
transcript_50234.known	chr16	+	5540	41	FSM	ENSG00000161996.19	ENST00000293879.9	5540	41	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_33	26.1717404847289	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCTGCATTGTTGCAC	0	True	NA	33	True	AATAAA	-18	NA	649364	667830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_649427_649762_649855_649990_650168_650253_650363_650538_650710_650994_651104_651198_651267_651643_651748_651826_652040_652466_652536_653340_653452_653524_653671_653745_653804_655028_655148_655306_655469_655572_655704_655772_655890_656301_656538_656731_656872_657090_657222_657761_657893_658182_658345_658524_658654_658895_659012_659085_659127_659244_659377_660057_660162_660611_660715_661050_661173_661341_661502_661596_661788_661890_662060_662219_662332_662678_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
transcript_5024.nnic	chr1	+	644	4	NNC	ENSG00000232022.8	novel	708	4	NA	NA	8	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.35702260395516	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGCAAGCCACTAAGT	NA	False	NA	-11	True	AATAAA	-3	NA	46442845	46482475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46443038_46453897_46453993_46455819_46455911_46482209
transcript_5025.nic	chr1	+	566	3	FSM	ENSG00000232022.8	ENST00000455247.2	575	3	-9	18	-1	-18	multi-exon	FALSE	canonical	2	5	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGCAAGCCACTAAGT	NA	False	NA	-11	True	AATAAA	-3	NA	46442828	46482475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46443038_46455819_46455911_46482209
transcript_50251.known	chr16	+	2490	19	FSM	ENSG00000140983.14	ENST00000315082.9	2490	19	0	0	0	0	multi-exon	TRUE	canonical	3	612	junction_10	159.400961937708	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTGTTTGTCTTTA	13	True	NA	12	True	NA	NA	NA	668131	674171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_50252.known	chr16	+	672	7	FSM	ENSG00000140983.14	ENST00000562708.5	672	7	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_1	97.9173404232139	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCCCCTCTATGACCCT	-7	True	NA	NA	False	NA	NA	NA	668111	670525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_668237_668352_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455
transcript_50253.known	chr16	+	2559	18	FSM	ENSG00000140983.14	ENST00000569675.5	2559	18	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_5	259.685609761024	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	16	True	NA	15	True	NA	NA	NA	668134	674174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_668237_668352_668412_668487_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_50255.known	chr16	+	1458	8	FSM	ENSG00000103269.14	ENST00000352681.8	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.20883424647321	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	-13	True	NA	15	True	AATAAA	-15	NA	675670	678268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
transcript_50259.known	chr16	-	2205	8	FSM	ENSG00000161999.13	ENST00000567120.5	2205	8	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_7	46.9398225260334	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGTGTCGGGAGTCGGT	9604	False	NA	-13	True	AGTAAA	-13	NA	684528	681670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065
transcript_50260.known	chr16	-	1015	8	FSM	ENSG00000161999.13	ENST00000562824.5	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	180.855788755933	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGGACCAGGACGC	9769	False	NA	NA	False	CATAAA	-33	NA	684363	682527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684233
transcript_50261.known	chr16	+	1340	7	FSM	ENSG00000103266.11	ENST00000219548.9	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1250	junction_4	50.1386965216377	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	-5	True	NA	12	True	NA	NA	NA	680409	682801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
transcript_50266.known	chr16	-	3243	9	FSM	ENSG00000127580.17	ENST00000293883.9	3243	9	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_8	23.2002155162404	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-13	True	NA	-8	True	AATAAA	-15	NA	690398	684621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_5027.nnic	chr1	+	567	3	NNC	ENSG00000232022.8	novel	575	3	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTTTGGGGGTAATTTG	NA	False	NA	3	True	AATAAA	-17	NA	46442845	46482489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46443038_46453897_46453993_46482209
transcript_50272.known	chr16	-	2095	11	FSM	ENSG00000103245.14	ENST00000251588.7	2095	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	17.7471124411832	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTACGAAAACAGCTCCT	1	True	NA	-14	True	AATAAA	-19	NA	740997	729764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740919
transcript_50277.known	chr16	+	1512	8	FSM	ENSG00000103253.19	ENST00000389703.8	1512	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.7556419517717	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	1	True	NA	9	True	AATAAA	-14	NA	727105	729715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
transcript_5028.known	chr1	+	398	2	FSM	ENSG00000232022.8	ENST00000635606.2	492	2	94	0	62	0	multi-exon	FALSE	canonical	3	20	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGGGTAATTTGTTAT	41	False	NA	7	True	AATAAA	-21	NA	46442923	46482493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46443038_46482209
transcript_50282.nic	chr16	+	680	3	NIC	ENSG00000103254.10	novel	870	5	NA	NA	-77	0	intron_retention	FALSE	canonical	3	152	junction_2	17.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	-8	True	NA	17	True	GATAAA	-17	NA	721594	722590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_721942_722083_722135_722308
transcript_50288.nnic	chr16	-	892	3	NNC	ENSG00000103245.14	novel	499	2	NA	NA	2	-371	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACTATTAAAATTCAC	-15	True	NA	NA	False	NA	NA	NA	741013	738351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_738694_739282_739739_740919
transcript_5029.nic	chr1	+	711	2	FSM	ENSG00000232022.8	ENST00000692135.1	718	2	1	6	1	-6	multi-exon	FALSE	canonical	3	6	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCCTCATGATCTCTGG	NA	False	NA	NA	False	AATAAA	-16	NA	46442830	46445702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46443038_46445198
transcript_50291.known	chr16	+	1686	3	FSM	ENSG00000103254.10	ENST00000566525.5	1686	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	94.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGACTCATGTTTTATG	-3	True	NA	16	True	GATAAA	-16	NA	720580	722589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_721703_721800_722084_722308
transcript_50292.known	chr16	+	454	3	FSM	ENSG00000103254.10	ENST00000568916.1	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	95.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	4	True	NA	17	True	GATAAA	-17	NA	721671	722590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_721703_721800_721942_722308
transcript_50294.known	chr16	+	475	2	FSM	ENSG00000103254.10	ENST00000570237.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	274	False	NA	17	True	GATAAA	-17	NA	721941	722590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_722135_722308
transcript_50295.known	chr16	-	499	2	FSM	ENSG00000103245.14	ENST00000567172.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	1	True	NA	-8	True	NA	NA	NA	740997	739317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_739739_740919
transcript_50296.known	chr16	-	1585	14	FSM	ENSG00000162004.19	ENST00000345165.10	1585	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	10.6815108742262	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTCTTTATCGTGTCTA	5	True	NA	NA	False	CATAAA	-23	NA	726443	722581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_722790_722921_723023_723094_723162_723856_723937_724105_724206_724321_724510_724680_724807_724910_724990_725077_725146_725236_725294_725412_725581_725793_725881_725965_726086_726307
transcript_50298.known	chr16	+	4494	19	FSM	ENSG00000127586.17	ENST00000471202.5	4494	19	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	135.44740676735	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	-23	True	NA	27	True	TATAAA	-21	NA	788634	798072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790006_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_50300.known	chr16	-	985	3	FSM	ENSG00000127588.5	ENST00000248150.5	985	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCAGCTTCCTGTCTCTG	-2	True	NA	NA	False	TATAAA	-5	NA	800734	798040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_798825_798979_799112_800665
transcript_50301.known	chr16	-	2606	11	FSM	ENSG00000103227.19	ENST00000262301.16	2606	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	15.3231850475024	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGTTTAAATGAAGAA	-12	True	NA	-3	True	NA	NA	NA	970984	853633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_934243_934255_954356_954667_970787
transcript_50302.known	chr16	-	1603	10	FSM	ENSG00000103227.19	ENST00000568897.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	12.5324270751942	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGACCCAGCCCCTCGGC	-1	True	NA	-28	True	AATAAA	-3	NA	970866	854511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_954352_954667_970787
transcript_50305.known	chr16	-	813	3	FSM	ENSG00000260807.7	ENST00000565069.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGGACCTCCCAGAGAG	-5	True	NA	NA	False	NA	NA	NA	981298	976520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_977094_979024_979111_981144
transcript_50306.nic	chr16	-	807	2	ISM	ENSG00000196364.9	ENST00000568091.2	1864	4	2004	0	1156	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCCGGGCTCTGTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	1261841	1260951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_1261463_1261545
transcript_50312.known	chr16	+	3109	8	FSM	ENSG00000103275.21	ENST00000397515.6	3109	8	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	934.562912133096	4203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	-24	True	NA	20	True	ATTAAA	-15	NA	1309634	1327018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309774_1312346_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_50316.known	chr16	+	2832	7	FSM	ENSG00000103275.21	ENST00000325437.9	2832	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	786.541303570399	4457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	-12	True	NA	20	True	ATTAAA	-15	NA	1309152	1327018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309272_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_50317.known	chr16	+	3253	7	FSM	ENSG00000103275.21	ENST00000355803.8	3253	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	794.942083844268	4475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	NA	False	NA	20	True	ATTAAA	-15	NA	1308879	1327018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309420_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_5032.nnic	chr1	+	2925	5	NIC	ENSG00000197587.11	novel	5050	6	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	5.24404424085076	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAATAAA	5	True	NA	NA	False	NA	NA	NA	46489816	46514212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_46489878_46506998_46507165_46510475_46510655_46510934_46511284_46512042
transcript_50320.known	chr16	+	1098	7	FSM	ENSG00000103275.21	ENST00000566587.5	1098	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	800.788240145643	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGAATTGCCCGTTTC	87	False	NA	-30	True	NA	NA	NA	1309802	1324952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1310254_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_50321.known	chr16	+	2850	7	FSM	ENSG00000103275.21	ENST00000397514.8	2850	7	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_1	199.951382979852	7555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	-23	True	NA	19	True	ATTAAA	-14	NA	1309635	1327017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_50322.known	chr16	+	1771	4	FSM	ENSG00000103275.21	ENST00000473256.6	1771	4	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_1	120.66850827324	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	-23	True	NA	NA	False	NA	NA	NA	1309635	1317125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653
transcript_50323.known	chr16	-	1210	6	FSM	ENSG00000007520.4	ENST00000007390.3	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_5	78.0138449251157	623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTTGTGAGTCTGTTTT	-32	True	NA	-6	True	AATGAA	-16	NA	1351878	1349239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1349609_1349888_1349953_1350057_1350235_1350806_1351001_1351378_1351599_1351692
transcript_50326.known	chr16	+	1237	11	FSM	ENSG00000090581.11	ENST00000683887.1	1237	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	114.555706972634	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTGGGTTAAGAAAATT	8	True	NA	5	True	AGTAAA	-16	NA	1351954	1363351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361694_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_50328.known	chr16	+	1975	11	FSM	ENSG00000090581.11	ENST00000204679.9	1975	11	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	27.9291961932312	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAGTAGCACAAAATATA	-16	True	NA	5	True	AATAAA	-20	NA	1351930	1364113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_5033.known	chr1	+	5050	6	FSM	ENSG00000197587.11	ENST00000360032.4	5050	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.21110255092798	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTCAGTCCATGTTCATT	0	True	NA	18	True	AATAAA	-19	NA	46489835	46516216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46489878_46490643_46490784_46506998_46507165_46510475_46510655_46510934_46511284_46512042
transcript_50332.known	chr16	+	2185	10	FSM	ENSG00000090581.11	ENST00000683366.1	2185	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	117.155273140783	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	-7	True	NA	NA	False	GATAAA	-31	NA	1351939	1364387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_50334.known	chr16	+	2313	10	FSM	ENSG00000090581.11	ENST00000527168.6	2313	10	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	19.5681777446678	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	-1	True	NA	NA	False	GATAAA	-31	NA	1351945	1364387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_50339.known	chr16	-	1431	6	FSM	ENSG00000059145.19	ENST00000301712.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5463442476886	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGAGTAGAGGATTTTGT	5986	False	NA	NA	False	AATAAA	-17	NA	1414751	1398304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_50340.nnic	chr16	-	1134	5	NIC	ENSG00000059145.19	novel	1431	6	NA	NA	-14	-54	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	8.86002257333467	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAATGTGTCCCATAAATA	-11	True	NA	NA	False	AATAAA	-21	NA	1414718	1398358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1414614
transcript_50342.known	chr16	+	379	2	FSM	ENSG00000260132.1	ENST00000568554.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAGGAACCTTGTAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	1408833	1412248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1408893_1411928
transcript_50343.known	chr16	-	917	2	FSM	ENSG00000174109.5	ENST00000442039.3	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-10	True	NA	-7	True	AATAAA	-22	NA	1420747	1419751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1420613_1420691
transcript_50344.known	chr16	-	1005	1	FSM	ENSG00000174109.5	ENST00000563974.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1835	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-19	True	NA	-7	True	AATAAA	-22	NA	1420756	1419751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1419800_1420800
transcript_50346.known	chr16	-	708	6	FSM	ENSG00000197599.13	ENST00000483702.5	708	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.46969384566991	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGTTCCCTGATGTGT	6610	False	NA	NA	False	AATAAA	-25	NA	1437903	1434382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1434535_1434667_1434853_1435088_1435176_1436444_1436522_1436691_1436812_1437816
transcript_50348.known	chr16	+	3314	21	FSM	ENSG00000100726.15	ENST00000262319.11	3314	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	77.7718458055356	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	-13	True	NA	NA	False	AATAAA	-15	NA	1493359	1510454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_5035.known	chr1	-	2686	13	FSM	ENSG00000079277.22	ENST00000650508.1	2686	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41.8535807574719	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-4	True	NA	-1	True	AATAAA	-23	NA	46604294	46557407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_50353.known	chr16	+	1327	4	FSM	ENSG00000100726.15	ENST00000568240.1	1327	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	8.01387685344754	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGAGTGTTGGTGGCCGGT	NA	False	NA	NA	False	AATAAA	-18	NA	1506533	1510457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1507052_1507305_1507371_1507600_1507717_1509829
transcript_50357.known	chr16	+	593	6	FSM	ENSG00000206053.13	ENST00000566742.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	385.052412016858	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACACCTGTCCAATT	6	True	NA	NA	False	NA	NA	NA	1678289	1700225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810_1698844_1700073
transcript_50363.known	chr16	+	3185	6	FSM	ENSG00000206053.13	ENST00000562684.5	3185	6	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_1	435.157167009806	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTTGTTTTGTTTTG	-7	True	NA	88	True	NA	NA	NA	1678276	1701490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_50367.known	chr16	+	3695	5	FSM	ENSG00000206053.13	ENST00000248098.8	3695	5	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_4	50.4430371805664	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTATTTTCATAT	-5	True	NA	25	True	AATAAA	-32	NA	1678278	1702086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_5037.known	chr1	-	2612	12	FSM	ENSG00000079277.22	ENST00000341183.9	2612	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	50.684080666989	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-4	True	NA	-1	True	AATAAA	-23	NA	46604294	46557407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_50372.known	chr16	+	1065	4	FSM	ENSG00000206053.13	ENST00000561516.5	1065	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	431.008893953091	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGCCCTGACCCTCT	-5	True	NA	44	True	NA	NA	NA	1678278	1699599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1685438_1685588_1697811_1697861_1698810
transcript_50376.known	chr16	+	911	4	FSM	ENSG00000206053.13	ENST00000569256.5	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	416.240582142374	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCCATTCTGGAGA	7445	False	NA	NA	False	NA	NA	NA	1678255	1699428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1691842_1691986_1697811_1697861_1698810
transcript_50392.known	chr16	-	811	5	FSM	ENSG00000103024.8	ENST00000564628.1	811	5	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_3	167.765461284497	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	1975	False	NA	-6	True	AATAAA	-40	NA	1771495	1770319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771268_1771411_1771488
transcript_50394.known	chr16	-	813	5	FSM	ENSG00000103024.8	ENST00000568561.5	813	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	187.862150259173	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGCCCAGGAACAGG	20	True	NA	-28	True	AATAAA	-18	NA	1771510	1770341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771192_1771279_1771411_1771488
transcript_50397.known	chr16	-	913	4	FSM	ENSG00000103024.8	ENST00000566600.1	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_3	32.3419232575925	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTTTTTTATAATAAAGT	1913	False	1771572	-63	True	NA	NA	NA	1771557	1770376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771411_1771488
transcript_50399.known	chr16	+	722	1	FSM	ENSG00000275092.1	ENST00000621884.1	722	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATCATTCCTCCTTT	444	False	NA	NA	False	TATAAA	-14	NA	1707251	1707973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1707300_1708000
transcript_50404.known	chr16	+	1049	8	FSM	ENSG00000095906.17	ENST00000565987.5	1049	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	289.107846553454	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCGCTTTCCAGGGCC	25	True	NA	NA	False	NA	NA	NA	1782989	1788726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1783876_1784067_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_50408.known	chr16	+	1349	7	FSM	ENSG00000095906.17	ENST00000262302.14	1349	7	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	113.831259131908	3008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	-5	True	NA	18	True	ATTAAA	-25	NA	1782959	1789186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_50413.known	chr16	+	815	6	FSM	ENSG00000095906.17	ENST00000565134.5	815	6	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	119.210066689018	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGACTTCATCCAGGAG	42	True	NA	NA	False	NA	NA	NA	1783006	1788613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788208_1788568
transcript_50417.known	chr16	+	1173	6	FSM	ENSG00000095906.17	ENST00000568834.5	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	168.872259415216	2633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCTGATGTTTCTAGA	-33	True	NA	13	True	ATTAAA	-20	NA	1782931	1789181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_50418.known	chr16	+	582	6	FSM	ENSG00000095906.17	ENST00000569898.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	277.48225168468	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGGACGCGACGCCCG	34	True	NA	NA	False	NA	NA	NA	1782998	1788680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788160_1788208_1788568
transcript_50420.known	chr16	+	995	6	FSM	ENSG00000095906.17	ENST00000565603.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	113.73899946808	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGAAACAGAGGCCT	31	True	NA	NA	False	NA	NA	NA	1782995	1788767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_50428.known	chr16	+	2196	5	FSM	ENSG00000095906.17	ENST00000567700.5	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	41.2128620699898	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGATGTTTCTAGAGT	-33	True	NA	15	True	ATTAAA	-22	NA	1782931	1789183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1787832_1787940_1788052_1788137_1788208_1788568
transcript_50429.nnic	chr16	+	1108	5	NIC	ENSG00000095906.17	novel	1349	7	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	297.678097951462	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	NA	False	NA	18	True	ATTAAA	-25	NA	1782882	1789186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_1783037_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_5043.nic	chr1	-	754	6	ISM	ENSG00000079277.22	ENST00000649800.1	2809	14	-1	17418	-1	0	5prime_fragment	FALSE	canonical	3	58	junction_5	44.3684572641421	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	-5	True	NA	2	True	AATAAA	-20	NA	46604295	46574825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_50435.known	chr16	-	1040	3	FSM	ENSG00000074071.15	ENST00000177742.7	1040	3	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	1202	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGTGGTGTCTTTGCGCT	-12	True	NA	-4	True	AATAAA	-19	NA	1773150	1771889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1772535_1772603_1772647_1772798
transcript_50436.known	chr16	-	998	3	FSM	ENSG00000074071.15	ENST00000397375.7	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_2	40	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGGTCGTGGTGTCTTT	4	True	NA	-9	True	AATAAA	-14	NA	1773134	1771894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1772514_1772603_1772647_1772798
transcript_50438.known	chr16	-	713	2	FSM	ENSG00000074071.15	ENST00000569585.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	2723	junction_1	0	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGTCGTGGTGTCTT	33	True	NA	-10	True	AATAAA	-13	NA	1772698	1771895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1772514_1772603
transcript_50439.known	chr16	-	1628	6	FSM	ENSG00000162032.16	ENST00000567868.5	1628	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_5	80.3328077437855	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	-4	True	NA	-8	True	AATAAA	-19	NA	1782557	1776717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1782501
transcript_50440.known	chr16	-	1535	7	FSM	ENSG00000162032.16	ENST00000566339.6	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_6	78.0628308195107	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-18	True	NA	-2	True	AATAAA	-25	NA	1782571	1776711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1782501
transcript_50441.known	chr16	-	1746	5	FSM	ENSG00000162032.16	ENST00000563741.5	1746	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	88.0379889593123	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACCCACATGGCGTGA	NA	False	NA	-12	True	AATAAA	-15	NA	1782594	1776721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778613_1781357_1781496_1782501
transcript_50442.known	chr16	-	520	2	FSM	ENSG00000162032.16	ENST00000568416.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTACGGGGCTGGGCACT	-14	True	NA	NA	False	NA	NA	NA	1782567	1781041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1781496_1782501
transcript_50443.known	chr16	-	1781	4	FSM	ENSG00000162032.16	ENST00000569380.5	1781	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	101.6267681273	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	1	True	NA	-8	True	AATAAA	-19	NA	1782552	1776717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1777444_1777746_1778613_1781357_1781496_1782501
transcript_50444.known	chr16	-	1257	10	FSM	ENSG00000063854.13	ENST00000397353.6	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	77.9387223685662	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTTGCAGACTGTTT	-24	True	NA	-5	True	NA	NA	NA	1826841	1809102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826506_1826603_1826711
transcript_50445.known	chr16	-	2619	9	FSM	ENSG00000063854.13	ENST00000397356.8	2619	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	28.3978432279636	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGCTCATTTGTCAAC	-8	True	NA	NA	False	NA	NA	NA	1826825	1807628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826711
transcript_50446.known	chr16	+	1964	3	FSM	ENSG00000180185.12	ENST00000382666.6	1964	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTTTCAATTTTTGAA	21	False	NA	NA	False	AATAAA	-16	NA	1826966	1840207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1827866_1838015_1838135_1839261
transcript_50448.known	chr16	+	1974	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	415	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAGGGTAATTTTTTT	-5	True	NA	27	True	AATAAA	-20	NA	1826940	1828914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1826900_1828900
transcript_50449.known	chr16	-	1277	4	FSM	ENSG00000198736.13	ENST00000361871.8	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	18.1842422626478	2088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTGTTTTG	-2	True	NA	-5	True	AATGAA	-14	NA	1943199	1938228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1939144_1940777_1940893_1941256_1941406_1943101
transcript_50450.known	chr16	-	1363	5	NNC	ENSG00000198736.13	novel	550	5	NA	NA	-94	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	142.037847069012	872	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTGTCTTTTTTTTTG	9625	False	NA	-10	True	AATGAA	-9	NA	1943293	1938233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_1939144_1940777_1940812_1940814_1940893_1941256_1941406_1943101
transcript_50451.known	chr16	-	2145	10	FSM	ENSG00000140986.8	ENST00000268661.8	2145	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.993807989999907	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGTGGTGGCGCATG	1	True	NA	NA	False	ATTAAA	-13	NA	1954689	1943973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1944894_1945498_1945619_1945834_1945931_1946624_1946727_1946937_1947099_1947193_1947381_1950843_1950980_1952873_1953043_1953955_1954149_1954628
transcript_50453.nnic	chr16	+	670	2	Antisense	novelGene_ENSG00000140986.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCTCTGTGTGAATT	NA	False	NA	3	True	AATAAA	-24	NA	1943488	1944633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_1943756_1944230
transcript_50455.nnic	chr16	+	505	2	Antisense	novelGene_ENSG00000140986.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCTCTGTGTGAATT	NA	False	NA	3	True	AATAAA	-24	NA	1943498	1944633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_1943756_1944385
transcript_50460.known	chr16	+	675	4	FSM	ENSG00000140990.15	ENST00000268668.11	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	2364	junction_3	225.700391374642	10475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	-4	True	NA	26	True	TATAAA	-14	NA	1959537	1961975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1959755_1961152_1961292_1961496_1961637_1961796
transcript_50461.known	chr16	+	830	3	FSM	ENSG00000140990.15	ENST00000543683.6	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	2740	junction_1	81.5	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1	True	NA	26	True	TATAAA	-14	NA	1959542	1961975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1959755_1961152_1961292_1961496
transcript_50462.known	chr16	+	628	4	FSM	ENSG00000140990.15	ENST00000569148.1	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	1195.47823996182	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	10	True	NA	26	True	TATAAA	-14	NA	1959551	1961975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1959755_1961152_1961259_1961496_1961637_1961796
transcript_50463.known	chr16	-	945	7	FSM	ENSG00000140988.16	ENST00000343262.9	945	7	0	0	0	0	multi-exon	FALSE	canonical	3	17165	junction_4	11939.2473241267	19214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	-5	True	NA	-24	True	AATAAA	-18	NA	1964826	1962057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448_1964629_1964806
transcript_50480.known	chr16	-	625	4	FSM	ENSG00000140988.16	ENST00000533186.5	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_3	23471.2579599437	15971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	465	False	NA	-27	True	AATAAA	-15	NA	1964356	1962060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1964275
transcript_50484.known	chr16	-	170	3	FSM	ENSG00000140988.16	ENST00000563194.1	170	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	8497.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTTGAAGATTATGCC	NA	False	NA	NA	False	NA	NA	NA	1964841	1963211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1963257_1964275_1964366_1964806
transcript_50485.known	chr16	-	878	3	FSM	ENSG00000140988.16	ENST00000526586.6	878	3	0	0	0	0	multi-exon	FALSE	canonical	3	47622	junction_2	1048	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	1565	False	NA	-27	True	AATAAA	-15	NA	1963256	1962060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1962657_1962735_1962910_1963148
transcript_50486.known	chr16	+	275	2	FSM	ENSG00000255198.5	ENST00000531523.2	335	2	60	0	60	0	multi-exon	FALSE	canonical	3	570	junction_1	0	2118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCGGGTGTTCTTGGG	7	True	NA	20	True	AATAAA	-20	NA	1964958	1965509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1965130_1965405
transcript_50487.known	chr16	-	242	1	FSM	ENSG00000277602.1	ENST00000618631.1	242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTATTGAGCACCTT	9572	False	NA	NA	False	AATAAA	-19	NA	1971896	1971654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1971700_1971900
transcript_5049.known	chr1	-	2815	4	FSM	ENSG00000142961.16	ENST00000319928.9	2738	4	-73	-4	-73	4	multi-exon	FALSE	canonical	3	9	junction_3	4.92160768674447	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGGGAAGCGGTGATCT	NA	False	NA	NA	False	AATAAA	-20	NA	46616884	46607714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46609685_46610001_46610205_46612903_46613372_46616710
transcript_50490.known	chr16	+	6783	22	FSM	ENSG00000183751.16	ENST00000568546.6	6783	22	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_10	35.9624394633372	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCACTCCCCATATGA	-21	True	NA	NA	False	NA	NA	NA	1972052	1982929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_50497.known	chr16	+	2365	3	FSM	ENSG00000127554.13	ENST00000248114.7	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	13	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTCTTTTTGTTGT	-10	True	NA	10	True	AATAAA	-20	NA	1984192	1987749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1984477_1984746_1984944_1985865
transcript_50498.known	chr16	+	483	2	FSM	ENSG00000127554.13	ENST00000567719.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTCTCAGTTGGG	9	True	NA	26	True	ATTAAA	-18	NA	1984710	1986115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1984944_1985865
transcript_50500.nic	chr16	-	1517	4	ISM	ENSG00000167962.15	ENST00000562988.5	3382	11	9991	1	298	0	3prime_fragment	TRUE	canonical	3	187	junction_2	13.5728487143349	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGTGTTCTGAGCTT	9991	False	NA	-17	True	AATAAA	-21	NA	1999773	1997654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495
transcript_50512.known	chr16	-	802	5	FSM	ENSG00000065057.9	ENST00000651583.1	802	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	272.87726178632	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	52	False	NA	-8	True	AATAAA	-17	NA	2047778	2039820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2046127_2046367_2047708
transcript_50513.known	chr16	-	564	2	FSM	ENSG00000065057.9	ENST00000561862.5	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	7362	False	NA	-7	True	AATAAA	-18	NA	2040468	2039819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132
transcript_50514.known	chr16	-	733	5	FSM	ENSG00000065057.9	ENST00000651522.1	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	261.629986813439	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGGCTGATGTCTG	1640	False	NA	-5	True	AATAAA	-20	NA	2046190	2039817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132_2040242_2043566_2043727_2044629_2044801_2046127
transcript_50515.known	chr16	-	1030	6	FSM	ENSG00000065057.9	ENST00000651570.2	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_3	20.1553962997506	6763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-4	True	NA	-7	True	AATAAA	-18	NA	2047834	2039819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046367_2047708
transcript_50516.known	chr16	-	837	6	FSM	ENSG00000065057.9	ENST00000568513.5	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	253.299822344983	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	36	False	NA	-8	True	AATAAA	-17	NA	2047794	2039820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046279_2046367_2047708
transcript_50517.known	chr16	-	691	4	FSM	ENSG00000065057.9	ENST00000565406.5	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_3	25.7293606605372	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	3004	False	NA	-7	True	AATAAA	-18	NA	2044826	2039819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629
transcript_50518.known	chr16	+	5437	40	FSM	ENSG00000103197.18	ENST00000401874.7	5437	40	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_25	52.756421160855	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCTTTTATTGACTTTG	6	True	NA	47	True	NA	NA	NA	2047988	2088718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401_2055520_2056195_2056245_2056643_2056770_2057104_2057179_2058746_2058874_2060669_2060814_2061870_2062009_2062496_2062601_2062971_2063054_2064271_2064428_2065518_2065636_2070455_2070579_2071509_2071617_2071783_2071935_2072240_2072364_2072848_2072984_2074199_2074390_2075798_2075893_2076067_2076171_2076490_2076586_2079034_2079197_2079275_2079429_2079556_2079670_2080164_2080378_2081594_2081799_2083694_2083817_2084227_2084716_2084950_2085027_2085229_2085323_2086192_2086380_2086731_2086872_2087862_2087942_2088047_2088140_2088226_2088326_2088445
transcript_5052.nic	chr1	-	569	4	ISM	ENSG00000079277.22	ENST00000528077.6	1557	11	-27	22047	-1	0	5prime_fragment	FALSE	canonical	3	58	junction_3	56.1129812669641	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	-5	True	NA	-18	True	AATAAA	-19	NA	46604295	46580439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_46580628_46583227_46583330_46594112_46594281_46604184
transcript_50522.nic	chr16	+	1073	6	ISM	ENSG00000103197.18	ENST00000642812.1	2320	15	-44	9211	-1	0	5prime_fragment	FALSE	canonical	3	146	junction_5	9.60416576283438	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAG	11	True	NA	NA	False	NA	NA	NA	2047993	2055892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341_2053453_2054295_2054441_2055401
transcript_50526.known	chr16	+	2793	4	FSM	ENSG00000103197.18	ENST00000461648.3	2793	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	7.78888096369861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTGCTTGAAACCGGAA	2	True	NA	NA	False	NA	NA	NA	2047984	2055799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2048066_2048586_2048754_2050399_2050487_2053341
transcript_50527.known	chr16	+	1674	9	FSM	ENSG00000167964.13	ENST00000210187.11	1674	9	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_7	8.64580823289529	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTCTAGAGCAGGAT	1	True	NA	35	True	AATAAA	-41	NA	2148624	2154165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2148979_2149940_2150052_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2152886_2152988_2153046_2153145_2153223_2153318
transcript_50529.known	chr16	-	342	2	FSM	ENSG00000260260.2	ENST00000563192.2	394	2	47	5	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	7414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTCAAGTGTCTTTA	-4	False	NA	0	True	AATAAA	-23	NA	2155358	2154796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2154923_2155142
transcript_50531.known	chr16	+	3683	21	FSM	ENSG00000131653.13	ENST00000326181.11	3683	21	0	0	0	0	multi-exon	TRUE	canonical	3	1002	junction_1	81.8256683443527	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGGGGTGCGGTGGG	-5	True	NA	10	True	AATAAA	-21	NA	2155781	2178129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263_2171357_2171571_2171606_2172190_2172375_2172464_2172600_2173181_2173400_2173480_2173555_2173787_2173837_2173920_2174049_2174250_2174334_2175110_2175151_2175300_2175418_2175499_2175623_2175833_2175954_2176048_2176181_2176264_2176385_2176559
transcript_50535.known	chr16	+	666	4	FSM	ENSG00000131653.13	ENST00000567653.5	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	104.260357865405	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTTGCTGCTGGGTA	17	True	NA	6	True	AATAAA	-16	NA	2155803	2168510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076
transcript_50537.known	chr16	+	1861	9	FSM	ENSG00000167965.18	ENST00000382450.8	1861	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	222.317305612946	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	-20	True	NA	15	True	AATAAA	-16	NA	2205203	2209396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206030_2206215_2206360_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_50539.known	chr16	+	1861	9	FSM	ENSG00000167965.18	ENST00000564088.5	1861	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	171.797437044328	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	NA	False	NA	15	True	AATAAA	-16	NA	2205176	2209396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_50542.known	chr16	+	1671	9	FSM	ENSG00000167965.18	ENST00000569417.6	1671	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	142.176771573278	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGCGAGGGTGCCG	-15	True	NA	30	True	GATAAA	-19	NA	2205453	2209453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_50546.known	chr16	+	1691	9	FSM	ENSG00000167965.18	ENST00000397124.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	135.959035650449	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	-8	True	NA	16	True	AATAAA	-17	NA	2205740	2209397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_50548.known	chr16	+	1588	9	FSM	ENSG00000167965.18	ENST00000565250.1	1588	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	180.396784893745	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGGGCTCAGTCTGGGA	20	True	NA	-29	True	NA	NA	NA	2205768	2209352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205876_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_50550.known	chr16	+	1865	8	FSM	ENSG00000167965.18	ENST00000568542.5	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	179.238639238079	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGATGTTGCTCGGGAAG	33	False	NA	12	True	AATAAA	-13	NA	2205256	2209393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206060_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_50554.known	chr16	+	1403	8	FSM	ENSG00000167965.18	ENST00000565330.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	147.836230405162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGGCTAGCCTGCACT	-15	True	NA	NA	False	NA	NA	NA	2205453	2209098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_5056.known	chr1	-	594	5	FSM	ENSG00000079277.22	ENST00000486716.5	594	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	28.8389927008556	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	10020	False	NA	2	True	AATAAA	-20	NA	46594231	46574825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112
transcript_50560.known	chr16	-	826	6	FSM	ENSG00000182685.8	ENST00000328540.8	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	9.95991967839099	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGGTGTTCTCTA	-6	True	NA	-18	True	AATAAA	-15	NA	2210863	2209252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
transcript_50561.known	chr16	+	1646	7	FSM	ENSG00000167965.18	ENST00000563067.5	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_5	52.7523037938208	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTAATAAAAGCAGACCG	163	False	NA	-11	True	GGGGCT	-9	NA	2206028	2209370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208614_2208758
transcript_50562.known	chr16	-	905	2	FSM	ENSG00000184207.9	ENST00000562001.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCGGGTTCAGAGGGTG	913	False	NA	NA	False	NA	NA	NA	2213899	2212261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2212848_2213580
transcript_50563.known	chr16	-	3164	2	FSM	ENSG00000184207.9	ENST00000333503.8	3164	2	0	0	0	0	multi-exon	FALSE	canonical	3	1544	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCGGGACTT	-28	True	NA	NA	False	ACTAAA	-3	NA	2214840	2211592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2214054_2214137
transcript_50564.known	chr16	+	2194	6	FSM	ENSG00000167968.13	ENST00000564065.5	2194	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.33238075793812	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTCCCAGGCCTCTG	NA	False	NA	NA	False	AATAAA	-27	NA	2235815	2238711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2236961_2237037_2237127_2237217_2237302_2237375_2237650_2237766_2238019_2238361
transcript_50565.known	chr16	-	2037	7	FSM	ENSG00000205937.12	ENST00000566458.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_6	703.416582750854	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-5	True	NA	78	True	AATAAA	-23	NA	2268397	2253116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_50568.known	chr16	-	735	5	FSM	ENSG00000205937.12	ENST00000570051.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	1168	junction_4	833.016356382034	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGGCTGCACTTCTT	14	True	NA	NA	False	GGGGCT	-14	NA	2268114	2262207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_5057.known	chr1	-	464	3	FSM	ENSG00000079277.22	ENST00000465783.6	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	6.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAAGCTGTATTCACTG	9971	False	NA	-12	True	AATAAA	-25	NA	46594280	46580433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46580628_46583227_46583330_46594112
transcript_50570.nnic	chr16	+	753	3	NIC	ENSG00000260778.5	novel	543	2	NA	NA	11	5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	23	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACCTGGGGTTTTCTGA	NA	False	NA	18	True	AATAAA	-18	NA	2268165	2273423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_2268266_2271675_2271892_2272986
transcript_50571.known	chr16	+	543	2	FSM	ENSG00000260778.5	ENST00000563734.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGACCTGGGGTTT	NA	False	NA	13	True	AATAAA	-13	NA	2268154	2273418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2268266_2272986
transcript_50572.nic	chr16	-	498	2	ISM	ENSG00000205937.12	ENST00000570051.5	735	5	0	1686	0	3	5prime_fragment	FALSE	canonical	3	1168	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATTTGTAAAATTAGCT	14	True	NA	NA	False	AAAAAG	-1	NA	2268114	2263893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_2264332_2268054
transcript_50573.known	chr16	-	1826	1	FSM	ENSG00000205937.12	ENST00000566783.1	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	1518	False	NA	NA	False	NA	NA	NA	2267328	2265502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2265500_2267300
transcript_50574.known	chr16	-	1951	8	FSM	ENSG00000205937.12	ENST00000320225.10	1951	8	0	0	0	0	multi-exon	FALSE	canonical	3	1146	junction_7	744.902486427394	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTCTGGGTTCACTGC	2	True	NA	75	True	AATAAA	-20	NA	2268126	2253119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
transcript_50575.known	chr16	+	1700	3	FSM	ENSG00000238098.9	ENST00000482286.5	1700	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCACTTTCTTGCTTCT	497	False	NA	NA	False	AATAAA	-12	NA	2340970	2362666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2341374_2361115_2361201_2361454
transcript_50576.known	chr16	+	4230	17	FSM	ENSG00000162063.13	ENST00000397066.9	4230	17	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	54.0014105718545	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTGATGGACGTCCTT	-2	True	NA	29	True	ATTAAA	-20	NA	2429446	2458854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
transcript_5058.known	chr1	-	540	4	FSM	ENSG00000079277.22	ENST00000474868.2	540	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.5686858611256	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	9990	False	NA	-18	True	AATAAA	-19	NA	46594261	46580439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46580628_46583227_46583330_46585873_46585975_46594112
transcript_50580.nic	chr16	+	1177	6	ISM	ENSG00000162063.13	ENST00000397066.9	4230	17	-14	20197	-14	735	5prime_fragment	FALSE	canonical	3	394	junction_1	59.3720472950024	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGGAAAAGGAGGAAGAT	-16	True	NA	NA	False	NA	NA	NA	2429432	2438657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069
transcript_50586.known	chr16	+	1633	10	FSM	ENSG00000162062.15	ENST00000361837.9	1633	10	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	45.8583433447065	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	-14	True	NA	17	True	ATTAAA	-17	NA	2460108	2464963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_5059.known	chr1	-	588	4	FSM	ENSG00000079277.22	ENST00000525888.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.1661358757205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGCTTCCATTTTAAA	5	True	NA	NA	False	NA	NA	NA	46604246	46584546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46584804_46585873_46585975_46594112_46594281_46604184
transcript_50590.nic	chr16	+	1566	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	73.1948384450707	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	1804	False	NA	17	True	ATTAAA	-17	NA	2460076	2464963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_50592.known	chr16	+	1864	9	FSM	ENSG00000162062.15	ENST00000563531.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	48.4613247858537	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTTGTGTGATATTAAA	11	True	NA	-19	True	NA	NA	NA	2460133	2464927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_50596.nic	chr16	+	1857	8	NIC	ENSG00000162062.15	novel	2156	8	NA	NA	-9	0	intron_retention	FALSE	canonical	3	34	junction_1	78.2286027340019	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	1804	False	NA	16	True	ATTAAA	-16	NA	2460076	2464962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_5060.known	chr1	-	738	8	FSM	ENSG00000079277.22	ENST00000496619.6	738	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	44.3023010412667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCAGAAAAGGTACTTT	-4	True	NA	NA	False	AATATA	-9	NA	46604294	46568455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_50601.known	chr16	+	3172	11	FSM	ENSG00000162066.16	ENST00000293971.11	3172	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	32.251511592482	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	-10	True	NA	27	True	AATACA	-22	NA	2520370	2531417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
transcript_50603.known	chr16	+	2890	10	FSM	ENSG00000162066.16	ENST00000648227.1	2890	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	62.0089599260551	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGATGGTTGGTCCACA	16	True	NA	NA	False	GGGGCT	-2	NA	2520396	2531230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528993_2529096_2529474
transcript_50604.known	chr16	+	3273	10	FSM	ENSG00000162066.16	ENST00000302956.8	3273	10	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_8	25.5579709003514	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTTCTGTGACATGAAGT	-16	True	NA	32	True	AATACA	-27	NA	2520364	2531422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528719_2528993_2529096_2529474
transcript_50608.known	chr16	+	6673	7	FSM	ENSG00000162065.14	ENST00000567020.6	6673	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	3.87298334620742	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACTGTGAAATAACTTGC	3446	False	NA	21	True	AATAAA	-22	NA	2475050	2505734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2475171_2496033_2497114_2498237_2498397_2499356_2499421_2499834_2499931_2500267_2500491_2500803
transcript_5061.known	chr1	-	1222	6	FSM	ENSG00000123472.12	ENST00000526821.5	1222	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	324.243365390874	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCAGTATAAATAAAATTC	3089	False	NA	-41	True	AATGAA	-4	NA	46665372	46635078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46635971_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255
transcript_50611.known	chr16	+	1093	3	FSM	ENSG00000185883.12	ENST00000330398.9	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_1	22	670	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	-10	True	NA	26	True	AATAAA	-15	NA	2513951	2520218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2514183_2519217_2519402_2519540
transcript_5062.known	chr1	-	535	6	FSM	ENSG00000123472.12	ENST00000474020.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	91.0757926125268	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTTAATAAAGATGC	9568	False	NA	NA	False	AATAAA	-41	NA	46668109	46652420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_50620.known	chr16	+	2748	4	FSM	ENSG00000215154.6	ENST00000399702.5	2748	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	7.31816613336672	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAATAAGTTACTA	5471	False	NA	NA	False	AATAAA	-23	NA	2603349	2630494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2603728_2610461_2611053_2613959_2614069_2628824
transcript_50627.known	chr16	-	5775	3	FSM	ENSG00000260565.8	ENST00000671018.1	5775	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGCAGGTGGCCGTCCT	-10	True	NA	NA	False	AAGAAA	-9	NA	2673421	2667087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2672571_2672706_2672860_2673282
transcript_50628.known	chr16	+	2434	6	FSM	ENSG00000167977.9	ENST00000301738.9	2434	6	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_2	30.6698549067321	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCGTAGTAGCTGTTTAT	-2	True	NA	16	True	AATAAA	-17	NA	2682522	2709030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2682801_2695934_2696044_2697905_2697998_2699820_2699917_2702352_2702479_2707297
transcript_50631.nnic	chr16	-	672	4	NIC	ENSG00000205913.7	novel	818	6	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCGAGCACACAATGAT	9849	False	NA	NA	False	AGTAAA	-28	NA	2752611	2737085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_2737289_2737479_2737611_2743551_2743720_2752441
transcript_50634.known	chr16	+	3314	11	FSM	ENSG00000167978.17	ENST00000576924.5	3314	11	0	0	0	0	multi-exon	TRUE	canonical	3	343	junction_1	407.562755903922	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGTCTAAAGACTCACT	-46	True	NA	NA	False	NA	NA	NA	2752625	2763582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2752855_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560
transcript_50638.known	chr16	+	9044	15	FSM	ENSG00000167978.17	ENST00000301740.13	9044	15	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	638.187580382995	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTGTAGACTGTTTA	-34	True	NA	18	True	AATAAA	-18	NA	2752637	2771412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
transcript_50640.known	chr16	+	461	4	FSM	ENSG00000167978.17	ENST00000576415.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	634.408911244685	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAAGATAGAGG	42	True	NA	38	True	NA	NA	NA	2752713	2758524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2752847_2757471_2757580_2757780_2757946_2758469
transcript_50643.known	chr16	+	711	3	FSM	ENSG00000167978.17	ENST00000572278.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	765.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGTTTCTCGGCATGCC	167	False	NA	NA	False	NA	NA	NA	2759746	2761810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2760009_2760300_2760500_2761560
transcript_50644.known	chr16	+	1759	3	FSM	ENSG00000167978.17	ENST00000574331.5	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	6.5	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	307	False	NA	16	True	AATAAA	-16	NA	2769373	2771410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2770466_2770603_2770718_2770857
transcript_50645.known	chr16	-	331	3	FSM	ENSG00000103363.16	ENST00000572954.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	2272	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTTGCTGCCTCTTT	7	True	NA	-8	True	AATAAA	-16	NA	2777272	2771942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2772103_2776992_2777128_2777236
transcript_50646.known	chr16	-	997	3	FSM	ENSG00000103363.16	ENST00000409477.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	7288	junction_1	636.5	5876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGCATTTCTCATTT	9410	False	NA	-9	True	AATAAA	-15	NA	2777195	2771414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2772103_2775450_2775557_2776992
transcript_50647.known	chr16	-	974	4	FSM	ENSG00000103363.16	ENST00000409906.9	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	4933	junction_3	1502.92078596608	18379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-1	True	NA	-8	True	AATAAA	-16	NA	2777280	2771413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2772103_2775450_2775557_2776992_2777128_2777236
transcript_50648.known	chr16	-	582	5	FSM	ENSG00000103363.16	ENST00000262306.11	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	3240.46470432869	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	2	True	NA	-8	True	AATAAA	-16	NA	2777277	2771413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2771605_2771993_2772103_2775450_2775557_2776992_2777128_2777236
transcript_50649.known	chr16	-	472	3	FSM	ENSG00000103363.16	ENST00000494946.6	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	3630	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGCTGCCTCTTTTT	9478	False	NA	-6	True	AATAAA	-18	NA	2777127	2771940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2772103_2775450_2775626_2776992
transcript_5065.known	chr1	+	2256	12	FSM	ENSG00000186377.8	ENST00000371901.4	2256	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.43688521524088	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTTATGGTATTCT	-12	True	NA	10	True	AATAAA	-19	NA	47023668	47050751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_47023995_47029989_47030132_47031435_47031481_47033240_47033369_47035805_47035934_47036016_47036172_47038659_47038767_47039341_47039533_47046466_47046601_47048564_47048630_47049421_47049505_47049999
transcript_50650.known	chr16	+	1106	6	FSM	ENSG00000007038.11	ENST00000450020.7	1106	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTCATGGACAGC	45	False	NA	27	True	AATAAA	-39	NA	2817179	2821719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2817333_2817429_2817457_2817800_2817967_2818676_2818970_2820954_2821068_2821365
transcript_50651.known	chr16	+	1091	6	FSM	ENSG00000007038.11	ENST00000005995.8	1091	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.979795897113271	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTCATGGACAGC	-1	True	NA	27	True	AATAAA	-39	NA	2817236	2821719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2817333_2817429_2817457_2817800_2817967_2818676_2818970_2820954_2821110_2821365
transcript_50652.known	chr16	+	873	6	FSM	ENSG00000007038.11	ENST00000574813.5	873	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.979795897113271	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGGCCGGTCTGAGC	53	False	NA	NA	False	NA	NA	NA	2817290	2821587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2817333_2817429_2817457_2817800_2817967_2818682_2818970_2820980_2821110_2821365
transcript_50656.known	chr16	-	752	5	FSM	ENSG00000172460.18	ENST00000475030.5	752	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGCTTTTCTAGTAA	NA	False	NA	NA	False	AATAAA	-28	NA	2842710	2839567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2839932_2841162_2841329_2841572_2841600_2841679_2841772_2842607
transcript_50657.known	chr16	-	683	3	FSM	ENSG00000263280.3	ENST00000659109.1	683	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCATGTTATTTTGCT	0	True	NA	NA	False	AATAAA	-11	NA	2868204	2866351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2866853_2867460_2867530_2868091
transcript_50660.known	chr16	+	915	4	FSM	ENSG00000162076.13	ENST00000293981.10	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	114.624023078352	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCTTCTGGGTCCTT	-3	True	NA	29	True	AATAAA	-43	NA	2883212	2899382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2883273_2895219_2895321_2896351_2896772_2899048
transcript_50661.known	chr16	+	990	4	FSM	ENSG00000162076.13	ENST00000396958.8	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	31.3793987620328	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	-1	True	NA	12	True	AATAAA	-26	NA	2883214	2899365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2883367_2895219_2895321_2896351_2896772_2899048
transcript_50664.known	chr16	+	511	2	FSM	ENSG00000162076.13	ENST00000573965.1	511	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGCCCCTCAGGAGCCT	12	False	NA	NA	False	NA	NA	NA	2883227	2896723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2883367_2896351
transcript_50665.known	chr16	+	643	4	FSM	ENSG00000059122.17	ENST00000573525.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	48.9285192909003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTTGCAGATCCTGCC	13	True	NA	NA	False	NA	NA	NA	2912023	2929916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2912155_2914175_2914290_2928823_2928918_2929612
transcript_50666.known	chr16	+	5043	10	FSM	ENSG00000059122.17	ENST00000253928.14	5043	10	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	14.0694924316391	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTAAGAACTCTAAGTT	1	True	NA	NA	False	AATAAA	-23	NA	2911930	2951208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2912155_2914175_2914290_2929612_2930011_2930409_2930881_2933129_2933583_2933715_2933980_2937120_2937385_2938183_2938457_2940031_2940093_2948687
transcript_50667.known	chr16	-	510	3	FSM	ENSG00000262482.1	ENST00000573260.1	510	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTCTTGTAAAGACA	921	False	NA	NA	False	AAGAAA	-13	NA	2954276	2939713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2939981_2943326_2943485_2954191
transcript_50668.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000262300.13	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	418	junction_6	61.8595940416683	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTCATGTGGCAACAT	1	True	NA	-23	True	AATAAA	-28	NA	2980446	2972807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_50670.known	chr16	-	846	2	FSM	ENSG00000127564.17	ENST00000571102.1	846	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCAGAGAGCGGAGATGA	NA	False	NA	NA	False	NA	NA	NA	2970241	2968023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2968516_2969887
transcript_50671.known	chr16	-	717	2	FSM	ENSG00000127564.17	ENST00000574680.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCTTGCTCATGTGGC	8576	False	NA	-28	True	AATAAA	-23	NA	2973602	2972812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2973065_2973137
transcript_50673.nnic	chr16	-	899	2	Antisense	novelGene_ENSG00000272079.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTAGTACACTGCCCTTC	7338	False	NA	0	True	AATAAA	-38	NA	3007947	3006367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_3006786_3007466
transcript_50675.known	chr16	+	1269	1	FSM	ENSG00000272079.2	ENST00000607794.2	1269	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCTGCCCAGGTGTA	1903	False	NA	6	True	AATAAA	-20	NA	3006119	3007388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3006100_3007400
transcript_50676.known	chr16	+	1583	1	FSM	ENSG00000213937.4	ENST00000445369.3	1583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTCTAATCTGTGCGC	0	True	NA	NA	False	AATAAA	-17	NA	3012922	3014505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3012900_3014500
transcript_50677.known	chr16	+	648	4	FSM	ENSG00000006327.14	ENST00000573001.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	700.302950316663	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCATTTGCACAGGGGAG	45	False	NA	NA	False	AAAACA	-22	NA	3018444	3022086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3018537_3021214_3021320_3021554_3021690_3021770
transcript_50678.known	chr16	+	977	4	FSM	ENSG00000006327.14	ENST00000326577.9	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	1214	junction_1	133.479087001173	6673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	-1	True	NA	23	True	AATAAA	-19	NA	3020367	3022383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3020492_3021214_3021320_3021554_3021690_3021770
transcript_50682.known	chr16	+	881	3	FSM	ENSG00000006327.14	ENST00000341627.5	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	719.5	6541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	-10	True	NA	23	True	AATAAA	-19	NA	3020358	3022383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3020492_3021554_3021690_3021770
transcript_50690.known	chr16	-	1366	2	FSM	ENSG00000184697.7	ENST00000328796.5	1366	2	0	0	0	0	multi-exon	FALSE	canonical	3	4055	junction_1	0	30227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTTGCAGCGGGTTA	0	True	NA	-30	True	AATAAA	-19	NA	3018183	3014711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3016043_3018148
transcript_50691.known	chr16	-	461	3	FSM	ENSG00000184697.7	ENST00000572154.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	1864	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACGTCCACCCCCCAG	6101	False	NA	NA	False	NA	NA	NA	3018170	3014856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3015182_3015928_3016043_3018148
transcript_50692.known	chr16	+	1133	3	FSM	ENSG00000006327.14	ENST00000575124.1	1133	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	761.5	6491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	6	True	NA	23	True	AATAAA	-19	NA	3020374	3022383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3020760_3021554_3021690_3021770
transcript_50697.known	chr16	+	1300	14	FSM	ENSG00000131652.14	ENST00000574549.5	1300	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	306.571400604556	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTTCTATGAATGG	5	True	NA	69	True	AATAAA	-22	NA	3024040	3027755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3024087_3024192_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_50703.known	chr16	-	495	5	FSM	ENSG00000103145.11	ENST00000573842.1	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	186.37244297374	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCAGTCCCCCCTACC	-15	True	NA	NA	False	NA	NA	NA	3024286	3022917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3023969_3024180
transcript_50710.known	chr16	-	610	4	FSM	ENSG00000103145.11	ENST00000572355.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	241.905399324245	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCTTCAGTCTGGAAC	37	True	NA	-31	True	AATAAA	-15	NA	3024234	3022628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3024180
transcript_5072.known	chr1	+	661	2	FSM	ENSG00000224805.2	ENST00000429328.2	661	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTATGACGGCAGTA	NA	False	NA	NA	False	AATAAA	-25	NA	47179249	47180339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_47179439_47179867
transcript_50721.known	chr16	-	765	3	FSM	ENSG00000103145.11	ENST00000354679.3	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	273.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCCTTCTTCCCCAC	-2	True	NA	NA	False	NA	NA	NA	3024273	3022840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023413_3023846
transcript_50723.known	chr16	-	410	3	FSM	ENSG00000261971.9	ENST00000572222.2	639	3	224	5	223	-5	multi-exon	FALSE	canonical	0	0	junction_1	6	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGTGGTGGCATGTGCC	9136	False	NA	NA	False	AATAAA	-14	NA	3059085	3057860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3058018_3058539_3058703_3058995
transcript_50725.known	chr16	-	618	3	FSM	ENSG00000103145.11	ENST00000574151.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	213.5	2474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	7	True	NA	-27	True	AATAAA	-19	NA	3023961	3022624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023846
transcript_50726.known	chr16	-	828	4	FSM	ENSG00000103145.11	ENST00000573095.1	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	211.54826084529	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAGTCTGGAACCTG	4618	False	NA	-28	True	AATAAA	-18	NA	3024215	3022625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023531_3023846_3023969_3024180
transcript_50727.known	chr16	-	656	4	FSM	ENSG00000103145.11	ENST00000248089.8	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_3	103.82998924524	3530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	26	True	NA	-27	True	AATAAA	-19	NA	3023942	3022624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846
transcript_50728.known	chr16	-	1199	3	FSM	ENSG00000103145.11	ENST00000576921.1	1199	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	259	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	2	True	NA	-27	True	AATAAA	-19	NA	3024269	3022624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023969_3024180
transcript_50729.known	chr16	-	1365	2	FSM	ENSG00000103145.11	ENST00000575214.1	1365	2	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	10	True	NA	-65	True	NA	NA	NA	3024261	3022662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232
transcript_50730.known	chr16	-	845	5	FSM	ENSG00000103145.11	ENST00000574980.5	845	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	214.209447737489	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCATCCCACCCCCAAGA	10	True	NA	-78	True	NA	NA	NA	3024261	3022675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3024133_3024211
transcript_50731.known	chr16	+	1246	12	FSM	ENSG00000131652.14	ENST00000253952.9	1246	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	258.573710257566	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTCTTTCTTTCTAT	28	True	NA	63	True	AATAAA	-16	NA	3024063	3027749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3024366_3025707_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027576
transcript_50732.known	chr16	+	1360	13	FSM	ENSG00000131652.14	ENST00000575576.5	1360	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	237.503099394981	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAATAAAGTTTCAGG	18	True	NA	36	True	NA	NA	NA	3024053	3027722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_50733.known	chr16	+	920	7	FSM	ENSG00000008517.19	ENST00000440815.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.42555646998182	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGGAGGTGGGTTTCCCA	25	False	NA	25	True	AATAAA	-38	NA	3065368	3069551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065495_3065780_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_50734.known	chr16	+	674	7	FSM	ENSG00000008517.19	ENST00000530538.6	674	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.42555646998182	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGACCCCTCCCTCAG	16	False	NA	NA	False	AATGAA	-41	NA	3065652	3069396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065688_3065780_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_50735.known	chr16	+	814	7	FSM	ENSG00000008517.19	ENST00000533097.6	814	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.09459888459759	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGGAGATACCATGAT	167	False	NA	6	True	AATAAA	-19	NA	3065613	3069532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065656_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_50736.known	chr16	+	892	7	FSM	ENSG00000008517.19	ENST00000444393.7	892	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.09459888459759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGGAGGTGGGTTTCCCA	163	False	NA	25	True	AATAAA	-38	NA	3065609	3069551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065711_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_50738.known	chr16	+	810	6	FSM	ENSG00000008517.19	ENST00000548807.5	810	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.91454357496375	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTCTGAACCCCAATCC	-7	True	NA	NA	False	NA	NA	NA	3065391	3069326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065495_3065780_3065827_3067376_3067614_3067983_3068011_3068179_3068240_3068989
transcript_50739.known	chr16	+	1056	6	FSM	ENSG00000008517.19	ENST00000008180.13	1056	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.10925397308532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGATGGAGTTTCGCT	-6	True	NA	NA	False	NA	NA	NA	3065630	3069819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_50740.known	chr16	+	1067	6	FSM	ENSG00000008517.19	ENST00000396890.6	1067	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	5.56417109729742	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTATAAAGAAAAGAAGTT	2	True	NA	114	True	TATAAA	-20	NA	3065638	3069640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065688_3065783_3065827_3067376_3067614_3067983_3068011_3068179_3068240_3068989
transcript_50741.known	chr16	+	774	6	FSM	ENSG00000008517.19	ENST00000530890.5	774	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.23904756996088	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCGCGGAGGTGGGTTTC	163	False	NA	22	True	AATAAA	-35	NA	3065609	3069548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065656_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_50742.known	chr16	+	623	6	FSM	ENSG00000008517.19	ENST00000552356.5	623	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.23904756996088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCTGTCCTGTGCCC	40	False	NA	NA	False	NA	NA	NA	3065676	3069409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065711_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_50744.known	chr16	+	1014	5	FSM	ENSG00000008517.19	ENST00000548476.5	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTTATACTTCCCTGG	25	False	NA	-12	True	AATAAA	-1	NA	3065661	3069514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065827_3067376_3067614_3067983_3068011_3068179_3068240_3068989
transcript_50748.known	chr16	-	2716	6	FSM	ENSG00000130182.8	ENST00000576985.6	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	145.53542524073	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-4	True	NA	-31	True	ATTAAA	-31	NA	3099294	3088889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3099189
transcript_50749.known	chr16	-	2247	5	FSM	ENSG00000130182.8	ENST00000575108.5	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	220.854024187924	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCCCCTCTTTATTT	-2	True	NA	-35	True	ATTAAA	-27	NA	3099292	3088893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3099189
transcript_50751.known	chr16	-	2350	5	FSM	ENSG00000130182.8	ENST00000538082.5	2350	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	205.984677828231	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCACTTTCACAGCTG	-5	True	NA	-130	True	NA	NA	NA	3099295	3088988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092541_3093005_3099189
transcript_50757.known	chr16	-	747	4	FSM	ENSG00000130182.8	ENST00000576483.1	747	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	95.1571799124422	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCAAGAAGGAATTGCCT	-4	True	NA	NA	False	NA	NA	NA	3099294	3092228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3092317_3092541_3093005_3093267_3093359_3099189
transcript_50759.known	chr16	+	1968	7	FSM	ENSG00000122386.11	ENST00000219091.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	19.3081732837562	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	8	True	NA	20	True	ATTAAA	-16	NA	3112585	3120517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3112683_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_5076.known	chr1	-	5019	17	FSM	ENSG00000123473.17	ENST00000371877.8	5019	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_3	23.0268186035327	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTGTCTGTTATAGTT	-25	True	NA	-6	True	AATAAA	-22	NA	47314147	47250138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_47251923_47260288_47260540_47262902_47263117_47269634_47269867_47272075_47272242_47280240_47281210_47282344_47282460_47287550_47287661_47289434_47289586_47293457_47293545_47295764_47295849_47299904_47300153_47301560_47301749_47302233_47302347_47304888_47304997_47310275_47310363_47314035
transcript_50761.known	chr16	+	2062	7	FSM	ENSG00000122386.11	ENST00000382192.7	2062	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	21.0587801693788	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	-18	True	NA	20	True	ATTAAA	-16	NA	3112559	3120517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3112683_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_50762.known	chr16	+	2309	7	FSM	ENSG00000122386.11	ENST00000620094.4	2309	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.1551696790195	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCCCGCCTACACAGCT	1	True	NA	18	True	ATTAAA	-14	NA	3112578	3120515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3112951_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_50774.known	chr16	-	1489	4	FSM	ENSG00000263072.9	ENST00000573447.2	1489	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	19.0262975904404	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATATATTAAATTTTCC	-11	True	NA	-33	True	NA	NA	NA	3134873	3128861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3129654_3131746_3132104_3132849_3132946_3134629
transcript_50776.known	chr16	+	302	3	FSM	ENSG00000263011.2	ENST00000570700.2	305	3	0	3	0	-3	multi-exon	FALSE	canonical	2	3	junction_1	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGATGCTCAGACTTCA	-3	True	NA	NA	False	AATAAA	-17	NA	3106763	3109576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3106831_3108248_3108332_3109424
transcript_50779.known	chr16	-	2558	4	FSM	ENSG00000263072.9	ENST00000674022.1	2558	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAATTGGGAAAATTAC	NA	False	NA	NA	False	AATAAA	-9	NA	3143734	3100695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3101478_3114794_3114888_3114967_3116520_3143603
transcript_50780.known	chr16	-	1592	3	FSM	ENSG00000263072.9	ENST00000571963.5	1592	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGGGTTCTCCAGAAA	-20	True	NA	NA	False	NA	NA	NA	3134882	3128671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3129654_3131746_3132104_3134629
transcript_50781.nic	chr16	-	788	3	ISM	ENSG00000263072.9	ENST00000573447.2	1489	4	-12	2806	-3	-1	5prime_fragment	FALSE	canonical	2	5	junction_2	16.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	-23	True	NA	-12	True	CATAAA	-17	NA	3134885	3131667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_3132104_3132849_3132946_3134629
transcript_50782.known	chr16	-	634	2	FSM	ENSG00000263072.9	ENST00000575089.2	688	2	53	1	8	-1	multi-exon	FALSE	canonical	3	50	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	8860	False	NA	-12	True	CATAAA	-17	NA	3134827	3131667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3132104_3134629
transcript_50784.known	chr16	-	3348	5	FSM	ENSG00000010539.12	ENST00000431561.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	19.3455421221531	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATAGTTTTTGTTTCTTGC	0	True	NA	-36	True	NA	NA	NA	3235167	3222344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_50785.known	chr16	-	3008	5	FSM	ENSG00000010539.12	ENST00000414144.7	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	17.5552698640608	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	9	True	NA	-16	True	NA	NA	NA	3235158	3222324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_50787.known	chr16	-	2373	5	FSM	ENSG00000010539.12	ENST00000396870.8	2373	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	20.7484939212464	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGACTCTCATTTGT	-19	True	NA	-103	True	AATATA	-13	NA	3235186	3223335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_50788.known	chr16	-	1350	5	FSM	ENSG00000010539.12	ENST00000575948.1	1350	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	19.2272592950738	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGAACCCTTTCTGGG	-5	True	NA	NA	False	NA	NA	NA	3235070	3223891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_50796.known	chr16	+	629	4	FSM	ENSG00000262668.2	ENST00000576468.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATAAATCTTTCCATCTA	NA	False	NA	NA	False	NA	NA	NA	3188211	3224779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3188480_3189748_3189799_3191237_3191338_3224568
transcript_508.known	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11891.1818588398	8545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
transcript_50803.known	chr16	+	2859	7	FSM	ENSG00000162086.16	ENST00000669516.2	2859	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	21.7153299665364	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	3	True	NA	NA	False	AATAAA	-17	NA	3305496	3318851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
transcript_50806.known	chr16	+	2546	6	FSM	ENSG00000162086.16	ENST00000498240.6	2546	6	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	28.7569122125447	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	NA	False	NA	16	True	AATAAA	-17	NA	3305405	3318574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_50807.known	chr16	+	2361	6	FSM	ENSG00000162086.16	ENST00000574298.6	2361	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	30.0931885980864	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGTTGGGCGAGGATG	NA	False	NA	NA	False	AATAAA	-18	NA	3305471	3318852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
transcript_50810.known	chr16	+	598	5	FSM	ENSG00000162086.16	ENST00000571101.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	36.9687367920517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGCAGGCGTCATA	14	True	NA	NA	False	NA	NA	NA	3305507	3317252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_50815.nic	chr16	+	1309	3	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	66	6209	0	0	5prime_fragment	FALSE	canonical	3	27	junction_2	22.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGAGTCCCTGAGTACT	NA	False	NA	14	True	AATAAA	-28	NA	3305471	3312365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_3305644_3308312_3308837_3311752
transcript_50816.known	chr16	-	731	3	FSM	ENSG00000140993.11	ENST00000573695.5	731	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATTTAGGAAAACAAAT	1	True	NA	NA	False	TATAAA	-19	NA	3305430	3301678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3302010_3304763_3304945_3305211
transcript_50818.known	chr16	+	2468	2	FSM	ENSG00000281005.1	ENST00000573951.1	2468	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCAAGAACAATGCTGGA	4361	False	NA	NA	False	ATTAAA	-19	NA	3263742	3267567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3265769_3267125
transcript_50820.nic	chr16	+	1325	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	66	9109	0	-7	5prime_fragment	FALSE	canonical	3	72	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAACAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	3305471	3309465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_3305644_3308312
transcript_50821.nic	chr16	+	1627	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	66	8807	0	295	5prime_fragment	FALSE	canonical	3	72	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGATCCACAAGGAGAAC	NA	False	NA	NA	False	NA	NA	NA	3305471	3309767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_3305644_3308312
transcript_50822.known	chr16	-	3421	2	FSM	ENSG00000140993.11	ENST00000396862.2	3421	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTGTGTTTCATAA	1	True	NA	1	True	TATAAA	-44	NA	3305430	3298807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3302010_3305211
transcript_50823.known	chr16	+	691	3	FSM	ENSG00000006194.10	ENST00000574674.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAACTTGAATGTCTCTT	2972	False	NA	7	True	AATATA	-19	NA	3290402	3301401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3290554_3299105_3299157_3300912
transcript_50825.known	chr16	-	3108	7	FSM	ENSG00000140987.21	ENST00000396852.9	3108	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	10.3225750448013	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-13	True	NA	-4	True	AATAAA	-17	NA	3401004	3382084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_50839.known	chr16	-	906	5	FSM	ENSG00000140987.21	ENST00000571906.1	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	21.6029511872799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTACAGGGCCATGGCG	15	True	NA	NA	False	NA	NA	NA	3400976	3384839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3384942_3390009_3390134_3390422_3390518_3397191_3397745_3400944
transcript_50843.known	chr16	-	2441	4	FSM	ENSG00000140987.21	ENST00000576500.5	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	17.6320415405843	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAACAGAAAGAAG	-4	True	NA	NA	False	NA	NA	NA	3400995	3382357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3383712_3384458_3384942_3397191_3397745_3400944
transcript_50845.known	chr16	-	1746	3	FSM	ENSG00000140987.21	ENST00000439568.2	1746	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTCCTTTCCTGGAA	-3	True	NA	NA	False	NA	NA	NA	3400994	3382498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3383712_3384458_3384942_3400944
transcript_50848.known	chr16	+	1068	4	FSM	ENSG00000103343.13	ENST00000575752.5	1068	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	33.6286914537109	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTCCTCCTCTGTG	10	True	NA	7	True	AATAAA	-19	NA	3401234	3405043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3404908
transcript_50849.known	chr16	+	1586	4	FSM	ENSG00000103343.13	ENST00000571936.5	1586	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	34.4125300177453	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTTGCATGTAAATCA	10	True	NA	NA	False	NA	NA	NA	3401234	3408973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3408320
transcript_5085.known	chr1	+	2937	6	FSM	ENSG00000162368.14	ENST00000371873.10	2937	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_5	18.088670487352	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGTTTAGATTTCTG	-8	True	NA	33	True	AATAAA	-23	NA	47333789	47378839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_47334117_47368468_47368616_47372954_47373108_47374908_47374986_47375196_47375294_47376703
transcript_50852.known	chr16	-	5483	4	FSM	ENSG00000167981.7	ENST00000301744.7	5483	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.35702260395516	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAACTTTTTAAAAA	-26	True	NA	NA	False	ATTAAA	-23	NA	3443504	3432413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3437539_3440806_3440934_3443120_3443207_3443359
transcript_50860.known	chr16	+	2656	8	FSM	ENSG00000122390.19	ENST00000407558.9	2656	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	144.772164423403	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	-9	True	NA	14	True	AATAAA	-16	NA	3443679	3486953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443838_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_50863.known	chr16	+	1950	7	FSM	ENSG00000122390.19	ENST00000572169.6	1950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	153.995670934824	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCTGGCACAGGCGGT	17	True	NA	NA	False	NA	NA	NA	3443705	3485878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_50866.known	chr16	+	1149	7	FSM	ENSG00000122390.19	ENST00000424546.6	1149	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	142.842181756262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCCTGCCCTCACT	-7	True	NA	NA	False	NA	NA	NA	3443681	3485574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3448470_3448541_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_50871.known	chr16	+	2531	7	FSM	ENSG00000122390.19	ENST00000575076.5	2531	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	121.4780501435	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3	True	NA	13	True	AATAAA	-15	NA	3458077	3486952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_50872.known	chr16	+	2619	7	FSM	ENSG00000122390.19	ENST00000414063.6	2619	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	137.7672150969	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	-22	True	NA	13	True	AATAAA	-15	NA	3458011	3486952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_50875.known	chr16	+	2931	6	FSM	ENSG00000122390.19	ENST00000572584.2	2931	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	130.752590796512	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCATTACGAGCAAA	11	True	NA	-25	True	NA	NA	NA	3458044	3486914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_50877.known	chr16	+	833	6	FSM	ENSG00000122390.19	ENST00000570819.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	121.682537777612	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCGCTGCCTGTTCTTG	17	False	NA	NA	False	NA	NA	NA	3458129	3485604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485062_3485466
transcript_50878.known	chr16	+	1089	6	FSM	ENSG00000122390.19	ENST00000572942.5	1089	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	138.281741383308	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGAGTGGCCCCCACTC	3	True	NA	NA	False	NA	NA	NA	3458077	3485786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485084_3485466
transcript_5088.known	chr1	-	7524	7	FSM	ENSG00000269113.4	ENST00000606738.3	7524	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	8.61039423539299	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTAGTGTTTCTGTGTG	-16	True	NA	2	True	AATAAA	-18	NA	47997385	47760527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_47766107_47775169_47775440_47778453_47778545_47794585_47794761_47801472_47801620_47994033_47994598_47996687
transcript_50884.known	chr16	+	2522	6	FSM	ENSG00000122390.19	ENST00000360862.9	2522	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	147.199184780351	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	NA	False	NA	13	True	AATAAA	-15	NA	3457992	3486952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_50885.known	chr16	+	561	5	FSM	ENSG00000122390.19	ENST00000571107.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_4	137.395414770654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATTCACTGCTCACGA	17	True	NA	NA	False	NA	NA	NA	3458050	3482911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3482824
transcript_50886.known	chr16	+	3899	5	FSM	ENSG00000122390.19	ENST00000648681.1	3899	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	28.1813324738203	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCACCCTGCCCCAC	-8	True	NA	-98	True	NA	NA	NA	3458104	3486841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362
transcript_50888.nic	chr16	+	531	4	NIC	ENSG00000122390.19	novel	326	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	2.94392028877595	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	-21	True	NA	NA	False	AATAAA	-17	NA	3443667	3450165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_3443828_3447481_3447621_3448470_3448541_3450003
transcript_50891.known	chr16	+	328	3	FSM	ENSG00000122390.19	ENST00000575042.1	328	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCCTTCAGAACCATGA	57	False	NA	NA	False	NA	NA	NA	3443745	3450145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443838_3448470_3448541_3449979
transcript_50892.known	chr16	+	326	3	FSM	ENSG00000122390.19	ENST00000615865.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	16.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	45	False	NA	NA	False	AATAAA	-17	NA	3443733	3450165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3448470_3448541_3450003
transcript_50893.known	chr16	+	1719	3	FSM	ENSG00000122390.19	ENST00000573201.6	1719	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTAAACCTCTTTTTTT	34	True	NA	NA	False	NA	NA	NA	3443722	3449945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3447481_3447621_3448470
transcript_50895.known	chr16	+	537	2	FSM	ENSG00000122390.19	ENST00000574762.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGGAAGCAGTATCAT	99	False	NA	NA	False	NA	NA	NA	3443787	3448967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3448470
transcript_50898.known	chr16	+	266	2	FSM	ENSG00000122390.19	ENST00000574256.1	266	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACTTAAGTGAAATCCAT	65	False	NA	NA	False	NA	NA	NA	3443753	3448596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443894_3448470
transcript_50900.known	chr16	+	568	1	FSM	ENSG00000240311.1	ENST00000459875.1	568	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCTCTTATTAAAAAGA	32	False	NA	NA	False	NA	NA	NA	3496200	3496768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3496200_3496800
transcript_50901.known	chr16	+	4083	12	FSM	ENSG00000103351.13	ENST00000576634.6	4083	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	10.8025096563731	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGGTAGTAGTTAT	11	True	NA	NA	False	AATACA	-23	NA	3501003	3539048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3536121
transcript_50902.known	chr16	+	1643	13	FSM	ENSG00000103351.13	ENST00000341633.9	1643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	34.7733734342816	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAAGAGCTGACGCC	19	True	NA	-18	True	NA	NA	NA	3501011	3536559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3533098_3533156_3536121
transcript_50903.known	chr16	-	2223	18	FSM	ENSG00000126602.11	ENST00000246957.10	2223	18	0	0	0	0	multi-exon	FALSE	canonical	3	1360	junction_11	133.174703792063	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTGGGCTTTTTTT	3	True	NA	-5	True	TTTAAA	-18	NA	3717524	3658036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3690826_3690986_3717420
transcript_50907.nnic	chr16	-	1099	3	FSM	ENSG00000262468.7	ENST00000687438.1	1114	3	9	6	5	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGACTTGCCGCTTCTGG	-12	True	NA	-11	True	AATAAA	-16	NA	4253807	4246011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4246861_4246972_4247062_4253646
transcript_50908.known	chr16	-	376	3	FSM	ENSG00000262468.7	ENST00000648010.2	1074	3	74	624	3	-70	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCTGAAATGGCTGG	6811	False	NA	NA	False	AAAAAG	-39	NA	4253738	4246635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4246861_4246972_4247062_4253676
transcript_50909.known	chr16	-	2163	7	FSM	ENSG00000090447.12	ENST00000204517.11	2163	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	4.29793231940921	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	17	True	NA	-5	True	AATAAA	-20	NA	4273023	4257185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657
transcript_50912.known	chr16	-	595	4	FSM	ENSG00000090447.12	ENST00000574639.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.4276973520408	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCGTGAAGCCTGTC	-26	True	NA	NA	False	NA	NA	NA	4272894	4258188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4272657
transcript_50913.known	chr16	-	3472	28	FSM	ENSG00000262246.6	ENST00000251166.9	3472	28	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	14.8448769065415	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGCTGCTGTGGTC	-12	True	NA	-4	True	ATTAAA	-18	NA	4416596	4354541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_50914.known	chr16	-	2826	26	FSM	ENSG00000262246.6	ENST00000574025.5	2826	26	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_23	27.1601472750057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCAGCTGCTGCTCATC	-1	True	NA	NA	False	NA	NA	NA	4416627	4354963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4412355_4412431_4413307_4413405_4416458
transcript_5092.nnic	chr1	-	1666	8	NNC	ENSG00000242267.6	novel	817	4	NA	NA	-32079	-26576	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	4.95695759225642	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTTGACATTCTGGTATA	NA	False	NA	NA	False	AATAAA	-23	NA	48214507	48128290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_48128574_48159548_48159657_48161798_48161910_48164630_48164913_48166472_48166821_48179154_48179236_48212159_48212369_48214263
transcript_50926.known	chr16	-	674	6	FSM	ENSG00000217930.8	ENST00000571941.5	674	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	352.784353394535	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	5407	False	NA	-9	True	AATAAA	-14	NA	4345904	4340250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4343482_4343595_4345785
transcript_5095.nnic	chr1	-	1367	3	Antisense	novelGene_ENSG00000223720.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	8	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTTGGCCTTTCATTC	NA	False	NA	-4	True	AGTAAA	-21	NA	48214507	48186385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_48187300_48212159_48212369_48214263
transcript_50956.known	chr16	-	340	4	FSM	ENSG00000262686.1	ENST00000576080.1	340	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.86744175568088	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGCTGAATGAATCGTCG	NA	False	NA	NA	False	AATAAA	-1	NA	4328340	4324666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4324776_4325269_4325355_4326429_4326495_4328259
transcript_50957.known	chr16	-	353	4	FSM	ENSG00000217930.8	ENST00000571178.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	370.7086307181	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGGCTCCCCCCGCCCA	18	True	NA	-76	True	AAAAAG	-22	NA	4351293	4340317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4351231
transcript_50968.known	chr16	-	806	2	FSM	ENSG00000217930.8	ENST00000575942.1	806	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGGCACCGTGCCTG	-9	True	NA	NA	False	ATTAAA	-18	NA	4351320	4345289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4346007_4351231
transcript_50969.known	chr16	-	533	5	FSM	ENSG00000217930.8	ENST00000318059.8	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_4	142.967435103243	7284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-10	True	NA	-9	True	AATAAA	-14	NA	4351321	4340250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4351231
transcript_50970.known	chr16	-	650	5	FSM	ENSG00000217930.8	ENST00000573614.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	292.769000237389	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4	True	NA	-9	True	AATAAA	-14	NA	4351270	4340250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341673_4343206_4343292_4351231
transcript_50971.known	chr16	-	606	5	FSM	ENSG00000217930.8	ENST00000571986.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	320.10193688886	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4	True	NA	-9	True	AATAAA	-14	NA	4351315	4340250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341584_4343206_4343292_4351231
transcript_50972.known	chr16	+	2816	2	FSM	ENSG00000168140.5	ENST00000304735.4	2816	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGGTAGAAGGGCTG	0	True	NA	42	True	AATAAA	-26	NA	4371847	4383538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4371994_4380868
transcript_50975.known	chr16	+	2700	12	FSM	ENSG00000103423.14	ENST00000262375.11	2700	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	152.864440567722	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	-2	True	NA	17	True	AAAAAG	-17	NA	4425867	4456775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545
transcript_50978.nnic	chr16	+	2244	12	NNC	ENSG00000103423.14	novel	2700	12	NA	NA	14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	143.856907784629	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425818	4456775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545_4456155_4456542
transcript_50980.known	chr16	+	2591	11	FSM	ENSG00000103423.14	ENST00000355296.8	2591	11	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	62.4695926031217	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	-10	True	NA	17	True	AAAAAG	-17	NA	4425859	4456775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545
transcript_50987.known	chr16	+	403	3	FSM	ENSG00000103423.14	ENST00000573120.5	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	80	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAT	178	False	NA	NA	False	NA	NA	NA	4426047	4437625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4426093_4434383_4434518_4437401
transcript_5099.known	chr1	-	5003	13	FSM	ENSG00000132122.12	ENST00000371847.8	5003	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.7704085029937	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTTTGTTTATCCATT	-5	True	NA	NA	False	AATATA	-1	NA	48472204	48295372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48298894_48305786_48305879_48355669_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_50995.known	chr16	+	1797	7	FSM	ENSG00000103415.12	ENST00000458134.7	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	212.998435049024	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCGCTGTGTAAATGCT	1617	False	NA	-39	True	NA	NA	NA	4476339	4510295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4476488_4483636_4483755_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51.known	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29586	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00113_+_0_800
transcript_5100.known	chr1	-	2297	13	FSM	ENSG00000132122.12	ENST00000371843.7	2297	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	17.7920081934434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGAACCACAATGTGA	189	False	NA	NA	False	TTTAAA	-9	NA	48472010	48297836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48298894_48305786_48305879_48355717_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_51001.known	chr16	+	1727	6	FSM	ENSG00000103415.12	ENST00000406590.6	1727	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	189.877434151613	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	22	False	NA	12	True	AATAAA	-17	NA	4474702	4510346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4474848_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51003.known	chr16	+	1908	6	FSM	ENSG00000103415.12	ENST00000619913.4	1908	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	192.23901789179	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	1617	False	NA	12	True	AATAAA	-17	NA	4476339	4510346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4476666_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51005.known	chr16	+	1027	5	FSM	ENSG00000103415.12	ENST00000575120.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	205.46456507145	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGTGACTTTTTAAA	-4	True	NA	-52	True	ACTAAA	-6	NA	4476405	4509836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4476488_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51010.known	chr16	+	1673	6	FSM	ENSG00000103415.12	ENST00000570646.6	1673	6	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	53.4475443776419	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	-12	True	NA	13	True	AATAAA	-18	NA	4476397	4510347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4476488_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51011.known	chr16	-	1240	6	FSM	ENSG00000153406.14	ENST00000574425.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	174.487134196192	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCTTCCAGGAGAAGA	-41	True	NA	-22	True	AATAAA	-15	NA	4474643	4461694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474422
transcript_51012.known	chr16	-	1092	6	FSM	ENSG00000153406.14	ENST00000283429.11	1092	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	159.787859363595	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-23	True	NA	-21	True	AATAAA	-16	NA	4474625	4461693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474553
transcript_51017.known	chr16	-	1463	6	FSM	ENSG00000089486.17	ENST00000563507.5	1463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	310.441363223395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCCGGAAGGAGCCCCTG	-4	True	NA	NA	False	NA	NA	NA	4538784	4511805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4512684_4512790_4512948_4513695_4513852_4514045_4514145_4514574_4514665_4538701
transcript_51020.known	chr16	-	2774	6	FSM	ENSG00000089486.17	ENST00000563332.6	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_5	62.7330853696835	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATATGTGCTTTTTTA	9	True	NA	26	True	AATGAA	-10	NA	4538470	4510674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538324
transcript_51021.known	chr16	-	2706	6	FSM	ENSG00000089486.17	ENST00000567695.6	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	233.490556554221	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTTTTTAAAACCC	7	True	NA	32	True	AATACA	-3	NA	4538773	4510668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538701
transcript_51029.known	chr16	-	315	1	FSM	ENSG00000261612.1	ENST00000564581.1	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATTCGAGCCATATAAA	93	False	NA	NA	False	AAGAAA	-5	NA	4563128	4562813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4562800_4563100
transcript_51030.known	chr16	-	1374	3	FSM	ENSG00000153443.13	ENST00000283474.12	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	8.5	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCAGGCTCTGTGGTCTT	-5	True	NA	-6	True	NA	NA	NA	4614888	4608883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4609984_4610492_4610556_4614677
transcript_51032.known	chr16	+	709	3	FSM	ENSG00000168101.14	ENST00000590460.1	709	3	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_1	184	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCTGTCATCATCTCC	44	False	NA	NA	False	NA	NA	NA	4693760	4695292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4693880_4693983_4694239_4694957
transcript_51033.known	chr16	+	922	3	FSM	ENSG00000168101.14	ENST00000586252.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	255	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCCTTGTCTCGGTCAGC	6	True	NA	NA	False	NA	NA	NA	4693702	4695561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4693880_4693977_4694239_4695077
transcript_51043.nic	chr16	-	662	3	ISM	ENSG00000168096.15	ENST00000589065.5	561	6	-24	24431	0	-316	5prime_fragment	FALSE	canonical	3	21	junction_2	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGAAAGTGATGGCCTGG	-20	True	NA	NA	False	AATAAA	-7	NA	4734271	4729673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_4730152_4731511_4731580_4734155
transcript_51045.known	chr16	-	834	2	FSM	ENSG00000168096.15	ENST00000590689.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATCCCTGGCCTTC	3772	False	NA	NA	False	AAAAAG	-7	NA	4734195	4729357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4730152_4734155
transcript_51047.nic	chr16	-	428	2	ISM	ENSG00000168096.15	ENST00000589065.5	561	6	-24	26025	0	-1910	5prime_fragment	FALSE	canonical	3	21	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGGTGTTCAGTTC	-20	True	NA	NA	False	AATAAA	-22	NA	4734271	4731267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_4731580_4734155
transcript_51048.known	chr16	-	1418	11	FSM	ENSG00000067836.13	ENST00000322048.12	1418	11	0	0	0	0	multi-exon	TRUE	canonical	3	392	junction_2	19.8343137012602	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	13	True	NA	-6	True	AATAAA	-16	NA	4802633	4796967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
transcript_51052.known	chr16	-	1362	10	FSM	ENSG00000067836.13	ENST00000587843.5	1362	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	126.258993079041	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGAGCCCCTGTCTGTC	13	True	NA	-7	True	AATAAA	-15	NA	4802633	4796968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801502_4801586_4802381_4802454_4802526
transcript_51056.known	chr16	+	394	4	FSM	ENSG00000267795.6	ENST00000588606.5	394	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTCTGCAGTGTCTT	12	False	NA	NA	False	NA	NA	NA	4795377	4796281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4795450_4795714_4795859_4795947_4796034_4796189
transcript_51057.known	chr16	+	628	4	FSM	ENSG00000267795.6	ENST00000586005.6	628	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATCACGAGGTCAGGAGA	3	True	NA	NA	False	NA	NA	NA	4795368	4796491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4795450_4795714_4795859_4795947_4796049_4796189
transcript_51059.known	chr16	-	1091	1	FSM	ENSG00000275056.1	ENST00000614098.1	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCGGCTTGTTCTCAC	6954	False	NA	-1	True	AATAAA	-14	NA	4840334	4839243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4839200_4840300
transcript_51060.known	chr16	-	1831	16	FSM	ENSG00000140632.17	ENST00000591451.5	1831	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	170.477238624072	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGTCAGCAGGATTGG	23	True	NA	NA	False	NA	NA	NA	4847265	4805048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_51062.known	chr16	+	3900	13	FSM	ENSG00000033011.14	ENST00000262374.10	3900	13	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_12	21.5450110234365	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGCTATGTTGCTCAAG	9	True	NA	11	True	GATAAA	-18	NA	5071842	5087379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_51068.known	chr16	+	1419	13	FSM	ENSG00000033011.14	ENST00000544428.1	1419	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	87.7879389336725	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTTCTTCTCTGGAGG	414	False	NA	33	True	NA	NA	NA	5072247	5085057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072304_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_51069.known	chr16	+	1689	13	FSM	ENSG00000033011.14	ENST00000591822.5	1689	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.0562872384603	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTGGTTCTGTGAC	15	True	NA	-6	True	NA	NA	NA	5071848	5085018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072214_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_51070.known	chr16	+	2058	13	FSM	ENSG00000033011.14	ENST00000683739.1	2058	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.0562872384603	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCCGCTTTCCCATAT	702	False	NA	-10	True	AATGAA	-3	NA	5072535	5085550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072738_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_51071.known	chr16	+	2668	12	FSM	ENSG00000033011.14	ENST00000682985.1	2668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	122.232538173883	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	332	False	NA	-28	True	NA	NA	NA	5033922	5085532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5034062_5042094_5042968_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_51072.known	chr16	+	2051	12	FSM	ENSG00000033011.14	ENST00000684190.1	2051	12	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_7	91.3930753114044	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	NA	False	NA	-28	True	NA	NA	NA	5071805	5085532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_51076.known	chr16	-	1360	8	FSM	ENSG00000153446.16	ENST00000472572.8	1360	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.9488706664723	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTTGAGTCTTGTTT	-12	True	NA	-1	True	AATAAA	-17	NA	5065956	5044121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5044479_5047877_5047965_5055245_5055351_5056052_5056189_5058492_5058611_5060285_5060437_5062424_5062575_5065700
transcript_51080.known	chr16	-	1282	8	FSM	ENSG00000118894.15	ENST00000587161.5	1282	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	131.445185285327	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	28	False	NA	NA	False	NA	NA	NA	5097766	5085362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097279_5097354_5097643
transcript_51088.nnic	chr16	-	1007	6	NNC	ENSG00000153446.16	novel	1360	8	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.8894911581615	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTTGAGTCTTGTTT	7311	False	NA	-1	True	AATAAA	-17	NA	5058719	5044121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_5044479_5047877_5047965_5054616_5054712_5055245_5055351_5056052_5056189_5058492
transcript_51091.nic	chr16	-	912	5	ISM	ENSG00000153446.16	ENST00000472572.8	1360	8	7237	0	-99	0	3prime_fragment	FALSE	canonical	3	17	junction_2	4.26468052730799	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTTGAGTCTTGTTT	7311	False	NA	-1	True	AATAAA	-17	NA	5058719	5044121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_5044479_5047877_5047965_5055245_5055351_5056052_5056189_5058492
transcript_51097.known	chr16	-	456	4	FSM	ENSG00000153446.16	ENST00000592343.1	456	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.89897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATGAAAATACCCAAGGG	7410	False	NA	NA	False	AAAACA	-9	NA	5058620	5047877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5047965_5055245_5055351_5056052_5056189_5058492
transcript_51101.known	chr16	+	2265	2	FSM	ENSG00000033011.14	ENST00000632058.1	2265	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	111	False	NA	NA	False	NA	NA	NA	5033701	5043999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5034062_5042094
transcript_51102.known	chr16	+	6445	16	FSM	ENSG00000103184.12	ENST00000251170.12	6445	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	6.01627422542852	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTGTGTGTGTTT	8	True	NA	13	True	NA	NA	NA	4958329	5019157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4958446_4959272_4959387_4987556_4987707_4988148_4988281_4990766_4990896_4991837_4992031_4996347_4996461_4996854_4997045_5000654_5000744_5000854_5000926_5003401_5003574_5005913_5006049_5007351_5007487_5008420_5008649_5011094_5011274_5014858
transcript_51103.known	chr16	-	2397	8	FSM	ENSG00000118894.15	ENST00000427587.9	2397	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	60.4243497343275	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTGTGGCTACTTTC	-1	True	NA	NA	False	AATAAA	-37	NA	5097795	5084283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097643
transcript_51104.known	chr16	-	2268	7	FSM	ENSG00000118894.15	ENST00000458008.8	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	93.5546483196972	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	6	False	NA	NA	False	AATAAA	-17	NA	5097788	5084303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5093483_5093565_5095451_5095515_5097643
transcript_51111.nnic	chr16	+	1216	2	NIC	ENSG00000267070.1	novel	531	4	NA	NA	34336	19645	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCATCACTGTCCTACC	NA	False	NA	NA	False	AATAAA	-22	NA	5133074	5162240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_5133380_5161329
transcript_51115.nic	chr16	+	1084	2	ISM	ENSG00000078328.23	ENST00000551752.5	974	11	-175	998457	-143	-68498	5prime_fragment	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGAGCTC	167	False	NA	NA	False	NA	NA	NA	6483617	6655389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_6483915_6654602
transcript_51116.known	chr16	+	1580	3	FSM	ENSG00000078328.23	ENST00000585867.2	1580	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGTTGTCAG	NA	False	NA	NA	False	AATACA	-18	NA	5239814	5600151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5240106_5467215_5467255_5598901
transcript_51117.known	chr16	-	1179	2	FSM	ENSG00000287340.2	ENST00000661083.2	1203	2	24	0	24	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATTATGTAAAGACCCA	1	True	NA	NA	False	AATGAA	-7	NA	7304638	7301604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_7302626_7304480
transcript_51118.known	chr16	+	456	2	FSM	ENSG00000260379.1	ENST00000567734.1	456	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCCCCCTTTGAGGGCT	NA	False	NA	NA	False	NA	NA	NA	8508068	8508585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8508216_8508276
transcript_51119.known	chr16	-	945	4	FSM	ENSG00000232258.7	ENST00000620492.5	1618	4	673	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	2.16024689946929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGCTTTACAGATTGC	673	False	NA	0	True	AATAAA	-19	NA	8589838	8569499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8570006_8572086_8572225_8589212_8589294_8589618
transcript_51120.known	chr16	-	899	4	FSM	ENSG00000232258.7	ENST00000568335.3	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGCTTTACAGATTGC	318	False	NA	0	True	AATAAA	-19	NA	8590193	8569499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8570006_8572086_8572225_8589212_8589294_8590019
transcript_51121.known	chr16	-	560	3	FSM	ENSG00000232258.7	ENST00000624696.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCTTGGCCCCGGA	673	False	NA	NA	False	NA	NA	NA	8589838	8569746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8570006_8589212_8589294_8589618
transcript_51132.known	chr16	+	4974	11	FSM	ENSG00000067365.15	ENST00000381920.8	4974	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	34.0189652987859	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGCGG	0	True	NA	NA	False	AATACA	-17	NA	8621697	8649654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_51138.nnic	chr16	+	1435	10	NIC	ENSG00000067365.15	novel	4974	11	NA	NA	-51	0	intron_retention	FALSE	canonical	3	24	junction_9	59.845067455601	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	NA	False	NA	17	True	AGTAAA	-18	NA	8621631	8646218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_51141.known	chr16	+	1510	10	FSM	ENSG00000067365.15	ENST00000163678.11	1510	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	45.8693797647189	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGATTTTGTCATTT	-7	True	NA	23	True	AGTAAA	-24	NA	8621690	8646224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_51146.nnic	chr16	+	1394	9	NIC	ENSG00000067365.15	novel	1510	10	NA	NA	-51	0	intron_retention	FALSE	canonical	3	24	junction_8	69.9820289431508	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	NA	False	NA	17	True	AGTAAA	-18	NA	8621631	8646218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_51154.known	chr16	+	1312	12	FSM	ENSG00000067365.15	ENST00000561758.5	1312	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.5611500267456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGTAAAATCAGAAGCT	5	True	NA	-10	True	NA	NA	NA	8621728	8646191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8628877_8629044_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_51155.known	chr16	+	4779	16	FSM	ENSG00000183044.12	ENST00000268251.13	4779	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	3.80992854992788	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGTGAATGTGGACTTT	0	True	NA	9	True	AATAAA	-15	NA	8674616	8784570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8674712_8735698_8735810_8746000_8746099_8748107_8748138_8750421_8750540_8757756_8757807_8764068_8764150_8764737_8764831_8766207_8766271_8768192_8768257_8768824_8768974_8772779_8772918_8774889_8775058_8776343_8776491_8779478_8779591_8781308
transcript_51159.nnic	chr16	+	1344	2	NIC	ENSG00000183044.12	novel	1870	2	NA	NA	-44	140	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATAGTATTTTATTAAT	NA	False	NA	NA	False	AATAAA	-14	NA	8674551	8715773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_8674712_8714589
transcript_51173.known	chr16	-	565	4	FSM	ENSG00000153048.11	ENST00000567908.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1298.03090187492	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCATCACTCACCTGGCAC	1293	False	NA	NA	False	NA	NA	NA	8867887	8855230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8867706
transcript_51174.known	chr16	-	3026	4	FSM	ENSG00000153048.11	ENST00000396593.6	3026	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	1290.52159997421	3411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTTTGTGTGGAGG	779	False	NA	-27	True	AATAAA	-22	NA	8868401	8852941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868048
transcript_51175.known	chr16	-	729	4	FSM	ENSG00000153048.11	ENST00000561530.5	729	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1301.31634210219	2023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGAGGTGCCCACT	-6	True	NA	-27	True	ATTAAA	-8	NA	8868361	8854920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868326
transcript_5118.known	chr1	-	1038	6	FSM	ENSG00000132122.12	ENST00000463938.5	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	23.5287058717644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGACATTAGTACTAAAAT	3	True	NA	NA	False	AATAGA	-36	NA	48472016	48399051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48452993_48453132_48471957
transcript_51186.known	chr16	-	1439	2	FSM	ENSG00000184857.8	ENST00000333050.7	1439	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	933	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGTACGTTATTTTATA	1	True	NA	1	True	AATAAA	-16	NA	8797639	8795179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8796591_8797611
transcript_51187.known	chr16	+	2285	8	FSM	ENSG00000140650.13	ENST00000268261.9	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_3	38.2425129393763	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCATTCCGATT	-7	True	NA	25	True	ATTAAA	-15	NA	8797838	8849325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_51188.known	chr16	+	931	7	FSM	ENSG00000140650.13	ENST00000562318.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	127.195387757051	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCCCCACCCACCCCC	-4	True	NA	NA	False	NA	NA	NA	8797841	8848051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_51189.known	chr16	-	2709	4	FSM	ENSG00000153048.11	ENST00000311052.10	2709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1731	junction_3	494.741908024331	19696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTATGCGTGTGTTTGTGT	2	True	NA	-32	True	AATAAA	-17	NA	8869006	8852946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868965
transcript_51190.known	chr16	-	1913	2	FSM	ENSG00000153048.11	ENST00000563815.5	1913	2	0	0	0	0	multi-exon	FALSE	canonical	3	1731	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCG	2	True	NA	NA	False	AATACA	-10	NA	8869006	8857463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8859336_8868965
transcript_51191.known	chr16	+	793	6	FSM	ENSG00000140650.13	ENST00000565221.5	793	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	135.529480187891	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAATGCCTCGCACAAA	21	True	NA	NA	False	NA	NA	NA	8797866	8848030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_51192.known	chr16	+	498	2	FSM	ENSG00000261481.1	ENST00000570290.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATTTACTTGAGGCC	8821	False	NA	NA	False	AATAAA	-14	NA	8869250	8870032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8869329_8869612
transcript_51194.known	chr16	-	5831	31	FSM	ENSG00000187555.16	ENST00000344836.9	5831	31	0	0	0	0	multi-exon	FALSE	canonical	2	331	junction_30	79.3211755390002	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACGTGTTGTAATGTTTCC	15	True	NA	-3	True	ATTAAA	-17	NA	8963906	8892096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8894105_8894549_8894641_8894783_8894856_8895030_8895151_8895641_8895742_8896998_8897100_8898359_8898438_8898530_8898640_8899120_8899189_8899603_8899758_8900529_8900631_8900989_8901058_8901141_8901235_8902081_8902188_8902380_8902483_8903267_8903403_8904434_8904566_8905186_8905332_8906425_8906583_8908340_8908451_8910744_8910828_8915253_8915345_8915444_8915526_8916501_8916557_8917025_8917157_8919030_8919140_8920358_8920448_8921156_8921296_8923214_8923414_8930292_8930398_8963206
transcript_51195.known	chr16	+	427	2	FSM	ENSG00000260979.1	ENST00000564485.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTCCACATCTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	8962705	8966990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8962895_8966752
transcript_51196.known	chr16	+	5952	4	FSM	ENSG00000182831.12	ENST00000327827.12	5952	4	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_3	10.8730042868667	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTGACTTGTGTTCCT	17	True	NA	NA	False	AATAAA	-36	NA	9091643	9121635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_9092271_9092920_9093002_9102983_9103260_9116667
transcript_51200.known	chr16	-	480	1	FSM	ENSG00000220793.5	ENST00000484462.1	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGGTGTTAAAAAAAAA	33	False	NA	NA	False	NA	NA	NA	9156881	9156401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_9156400_9156900
transcript_51207.nnic	chr16	-	1047	4	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	24.7161665492222	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676909	9666884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667391_9668890_9669099_9674300_9674398_9676673
transcript_51217.nnic	chr16	+	1255	3	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_2	10	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTACTTGTCCCTCAG	NA	False	NA	4	True	AATAAA	-22	NA	9674319	9717656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_9674462_9701069_9701257_9716730
transcript_51225.nnic	chr16	-	713	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	canonical	2	60	junction_2	4	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676973	9666884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667201_9674300_9674398_9676673
transcript_51229.nnic	chr16	-	872	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	29	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676973	9666884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667360_9674300_9674398_9676673
transcript_51233.nnic	chr16	-	1205	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	59	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676957	9666884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667360_9674300_9674747_9676673
transcript_51236.nnic	chr16	-	903	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	30	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676973	9666884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667391_9674300_9674398_9676673
transcript_51239.nnic	chr16	-	1236	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-114	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676957	9666884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667391_9674300_9674747_9676673
transcript_51245.nnic	chr16	-	723	2	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	628	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676921	9666884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667360_9676673
transcript_51246.known	chr16	-	660	2	FSM	ENSG00000260362.1	ENST00000561538.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	NA	False	NA	NA	False	AATAAA	-22	NA	9676843	9666884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_9667375_9676673
transcript_51250.nnic	chr16	+	809	2	Antisense	novelGene_ENSG00000183454.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAGACCAAGAAGGAAA	NA	False	NA	NA	False	AAGAAA	-9	NA	9674332	9755866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_9674462_9755186
transcript_51255.nnic	chr16	+	1466	3	NNC	ENSG00000283221.1	novel	179	2	NA	NA	-120252	-5072	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	16	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACACTGCATCTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	9674384	9800499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_9674462_9794521_9794723_9799311
transcript_51264.nnic	chr16	+	700	4	Fusion	ENSG00000283221.1_ENSG00000287830.1	novel	179	2	NA	NA	-120328	39	multi-exon	FALSE	canonical	2	6	junction_3	13.490737563232	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGTTATTGGTTAT	NA	False	NA	8	True	AATAAA	-20	NA	9674308	9810765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9810465
transcript_51284.known	chr16	+	576	3	FSM	ENSG00000166669.14	ENST00000566316.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	9.5	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	-1	True	NA	11	True	AATAAA	-21	NA	10386057	10387741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10386123_10387143_10387291_10387377
transcript_51290.known	chr16	+	1681	1	FSM	ENSG00000166669.14	ENST00000562396.1	1681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	2	True	NA	11	True	AATAAA	-21	NA	10386060	10387741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10386100_10387700
transcript_51291.known	chr16	+	3665	12	FSM	ENSG00000166669.14	ENST00000396560.6	3665	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.7956220082705	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCTATGTCTTTATTTT	-4	True	NA	11	True	AATAAA	-17	NA	10386054	10483638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10386123_10428867_10429017_10430610_10431456_10433524_10433650_10438100_10438236_10440363_10440463_10457371_10457530_10472109_10472184_10473478_10473535_10473922_10473990_10480878_10480965_10481835
transcript_51292.known	chr16	+	559	2	FSM	ENSG00000166669.14	ENST00000570163.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGTATTAGTTCTCAT	1033	False	NA	7	True	AATAAA	-17	NA	10387091	10387737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10387291_10387377
transcript_51295.known	chr16	-	5097	5	FSM	ENSG00000213853.10	ENST00000359543.8	5097	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	9.86154146165801	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTCCCTCTGCTTCTTT	-7	True	NA	NA	False	GATAAA	-20	NA	10580598	10528421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_10533093_10537927_10538075_10543569_10543661_10547539_10547678_10580548
transcript_51296.known	chr16	-	3582	2	FSM	ENSG00000213853.10	ENST00000342147.4	3582	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAATGTAG	-5	True	NA	NA	False	AAAAAG	-2	NA	10580632	10544179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_10547678_10580548
transcript_51304.known	chr16	-	3370	8	FSM	ENSG00000166676.17	ENST00000299866.13	3370	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	11.1976673955802	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCGTTTTGTCCAATT	-21	True	NA	0	True	AATAAA	-21	NA	10818794	10766674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_10769102_10770271_10770332_10771669_10771799_10773312_10773442_10774038_10774129_10774951_10775097_10818102_10818183_10818484
transcript_51306.known	chr16	-	3677	8	FSM	ENSG00000166676.17	ENST00000573360.5	3677	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.7428312159496	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCGTTTTGTCCAAT	11	True	NA	-1	True	AATAAA	-20	NA	10818651	10766675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_10769102_10770271_10770332_10771669_10771799_10773312_10773442_10774038_10774129_10774951_10775548_10818102_10818183_10818484
transcript_51327.known	chr16	+	1231	11	FSM	ENSG00000103274.11	ENST00000283027.10	1231	11	0	0	0	0	multi-exon	TRUE	canonical	3	194	junction_10	35.5681036885578	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	6	True	NA	23	True	AATAAA	-16	NA	10743841	10769351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_51328.known	chr16	+	1185	10	FSM	ENSG00000103274.11	ENST00000433392.6	1185	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	84.6138651335554	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	19	True	NA	23	True	AATAAA	-16	NA	10743854	10769351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_51329.known	chr16	-	1569	2	FSM	ENSG00000182108.11	ENST00000331808.5	1569	2	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGGGCCCTGCCTTTT	-4	True	NA	-1	True	ATTAAA	-22	NA	10942468	10928890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_10929560_10941568
transcript_51331.nic	chr16	+	2168	10	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-56	122804	-39	-20936	5prime_fragment	FALSE	canonical	3	43	junction_7	10.6249183003395	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGTTTAGTATTTT	-2	True	NA	NA	False	NA	NA	NA	10944524	11003983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073
transcript_51334.nic	chr16	+	1024	3	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-56	163711	-39	-61843	5prime_fragment	FALSE	canonical	3	69	junction_1	5.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAAGATCAAGTTGCCAG	-2	True	NA	NA	False	NA	NA	NA	10944524	10963076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_10944798_10957781_10957911_10962454
transcript_51335.nic	chr16	+	554	2	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-56	168725	-39	-66857	5prime_fragment	FALSE	canonical	3	69	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCCCTTGAAGCACTA	-2	True	NA	NA	False	NA	NA	NA	10944524	10958062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_10944798_10957781
transcript_51338.known	chr16	+	1865	5	FSM	ENSG00000175643.10	ENST00000572173.1	1865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.8613807855649	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTATGAGTTTTTTT	23	False	NA	8	True	AATAAA	-8	NA	11249648	11351755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11249779_11295215_11295295_11312828_11312938_11316451_11316885_11350641
transcript_5134.known	chr1	-	1693	6	FSM	ENSG00000162373.13	ENST00000371833.4	1693	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	18.7552659272003	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTCTTTATCCTCATTT	0	True	NA	1	True	AATAAA	-23	NA	48776891	48727518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48761336_48761471_48776605
transcript_51342.known	chr16	+	818	2	FSM	ENSG00000175643.10	ENST00000576027.1	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACTCAAACATTTAGAC	-1	True	NA	NA	False	NA	NA	NA	11345449	11351365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11345544_11350641
transcript_51343.known	chr16	+	1427	2	FSM	ENSG00000175643.10	ENST00000312499.6	1427	2	0	0	0	0	multi-exon	FALSE	canonical	3	1703	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTTTTTTTTTTTA	8	True	NA	13	True	AATAAA	-13	NA	11345458	11351760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11345767_11350641
transcript_51344.known	chr16	-	399	2	FSM	ENSG00000175646.4	ENST00000312511.4	399	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACTCTTCTCTCCTTGT	1	True	NA	-4	True	AATAAA	-14	NA	11281330	11280840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11281036_11281126
transcript_51346.known	chr16	-	714	2	FSM	ENSG00000263080.1	ENST00000572913.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTCTGTGTCTATC	NA	False	NA	NA	False	CATAAA	-1	NA	11345211	11341808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11342424_11345112
transcript_51347.known	chr16	-	505	2	FSM	ENSG00000263080.1	ENST00000572706.1	505	2	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGACATTAAGGCTATT	-1	True	NA	NA	False	ATTAAA	-13	NA	11345197	11344350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11344771_11345112
transcript_51358.known	chr16	-	717	5	FSM	ENSG00000189067.14	ENST00000574763.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	591.49529795257	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGGAGGGAGCCGGGTGC	2	True	NA	NA	False	NA	NA	NA	11586919	11549625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11575405_11575587_11586885
transcript_5136.known	chr1	-	1465	6	FSM	ENSG00000162373.13	ENST00000463562.1	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	24.1412510032103	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTCGTGTTTTCCTT	NA	False	NA	NA	False	AATAAA	-16	NA	48776932	48727869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759367_48761336_48761471_48776605
transcript_51360.known	chr16	-	593	5	FSM	ENSG00000189067.14	ENST00000570798.5	593	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	592.986667219424	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGCCCTGCAGGACGTG	3	True	NA	NA	False	NA	NA	NA	11586918	11549710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11584189_11584333_11586885
transcript_51365.known	chr16	-	1118	4	FSM	ENSG00000189067.14	ENST00000570904.5	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_3	417.923703829087	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGACTTCATTAGCACA	220	False	NA	NA	False	NA	NA	NA	11587247	11549106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587150
transcript_51366.known	chr16	-	2632	4	FSM	ENSG00000189067.14	ENST00000571688.5	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	536.755893203688	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	NA	False	NA	-12	True	AATAAA	-16	NA	11587563	11547721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587337
transcript_51371.known	chr16	-	2440	4	FSM	ENSG00000189067.14	ENST00000622633.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_3	242.910591690761	2376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	2	True	NA	-12	True	AATAAA	-16	NA	11586919	11547721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586885
transcript_51372.known	chr16	-	486	2	FSM	ENSG00000189067.14	ENST00000574703.5	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACGAATCTTTTGGCACA	2	True	NA	NA	False	AATAAA	-32	NA	11586919	11556283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11556736_11586885
transcript_51373.known	chr16	-	2292	5	FSM	ENSG00000189067.14	ENST00000413364.6	2292	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	462.719407416633	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTATGAGTTCTTTT	-4	True	NA	-51	True	AATAAA	-20	NA	11586950	11547998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11551706_11551805_11553532_11553690_11556510_11556736_11586885
transcript_51374.known	chr16	+	3264	2	FSM	ENSG00000184602.6	ENST00000329565.6	3264	2	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_1	0	955	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTTTCACCTCTGA	3	True	NA	21	True	AATAAA	-33	NA	11668454	11679152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11668541_11675974
transcript_51375.known	chr16	+	808	1	FSM	ENSG00000277369.1	ENST00000615722.1	808	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGAGGTCTCATTTATA	-40	True	NA	NA	False	NA	NA	NA	11797467	11798275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11797500_11798300
transcript_51377.known	chr16	-	1470	8	FSM	ENSG00000171490.13	ENST00000396503.7	1470	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	792.658610922374	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTTTGTAACCTTCTC	-4	True	NA	NA	False	NA	NA	NA	11851580	11837717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11851407
transcript_51380.known	chr16	-	710	5	FSM	ENSG00000171490.13	ENST00000573618.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	896.570131110779	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGCAGTGAAGGAAAA	19	True	NA	0	True	NA	NA	NA	11851518	11837954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11841930_11851407
transcript_51381.known	chr16	-	766	5	FSM	ENSG00000171490.13	ENST00000573029.1	766	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	899.576115456608	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCCAAAAATCAAAGAAGA	19	True	NA	-15	True	NA	NA	NA	11851518	11837969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11851407
transcript_51383.known	chr16	-	1323	9	FSM	ENSG00000171490.13	ENST00000355674.9	1323	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	746.968529708582	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAATCAAAGAAGAGGCA	-7	True	NA	-11	True	NA	NA	NA	11851544	11837965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841818_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_51384.known	chr16	-	871	7	FSM	ENSG00000171490.13	ENST00000570767.5	871	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	877.622055455663	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAGAAAAAAGTTAGTA	-5	True	NA	13	True	NA	NA	NA	11851542	11841707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850414_11851403
transcript_51385.known	chr16	-	2509	15	FSM	ENSG00000103342.13	ENST00000439887.6	2509	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_12	416.930896491229	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCGGTATTTGAATT	804	False	NA	-18	True	AATAAA	-16	NA	11915878	11872678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896783_11897839_11897882_11897993_11898036_11915368
transcript_51386.known	chr16	-	1603	15	FSM	ENSG00000103342.13	ENST00000420576.6	1603	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	500.510091847124	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTCTTGATGACCCTG	600	False	NA	NA	False	NA	NA	NA	11916082	11873118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11916041
transcript_51389.known	chr16	+	2248	8	FSM	ENSG00000048471.14	ENST00000564111.5	2248	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	3.32584192194938	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	11976744	12053284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846
transcript_51392.known	chr16	+	8173	21	FSM	ENSG00000048471.14	ENST00000566228.6	8173	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	4.73787927241714	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTCTGTCTCAGTTC	-5	True	NA	16	True	TATAAA	-16	NA	11976733	12574287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846_12052223_12061527_12061647_12069056_12069133_12078832_12078916_12126632_12126697_12129629_12129759_12199600_12199684_12277932_12278037_12356162_12356280_12398445_12398502_12403447_12403530_12477718_12477860_12524701_12524842_12568505
transcript_51396.known	chr16	-	6143	4	FSM	ENSG00000103381.12	ENST00000381774.9	6143	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	18.6607133363712	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-48	True	NA	1	True	ATTAAA	-21	NA	12803887	12659798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_12665116_12704623_12705050_12781184_12781404_12803706
transcript_51399.known	chr16	-	1993	3	FSM	ENSG00000103381.12	ENST00000433677.6	1993	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	68.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTCTTCTTTTAGTGT	-12	True	NA	-1	True	ATTAAA	-16	NA	12803851	12663486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_12665116_12781184_12781404_12803706
transcript_514.known	SIRV6	+	454	3	FSM	SIRV6A	SIRV611	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	2869	junction_1	13939	8902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1303	1950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1382_1468_1535_1640
transcript_5140.known	chr1	+	1653	7	FSM	ENSG00000162374.18	ENST00000448907.7	1653	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2.6718699236469	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAAATAATA	NA	False	NA	NA	False	AAGAAA	-4	NA	50048013	50201570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_50048183_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
transcript_51402.nnic	chr16	-	762	3	NNC	ENSG00000103381.12	novel	568	2	NA	NA	-18	9198	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	68.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTTTGGTTTGCTGGG	NA	False	NA	NA	False	AATAAA	-14	NA	12803905	12771775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_12772120_12781184_12781404_12803706
transcript_51403.known	chr16	+	324	1	FSM	ENSG00000241932.1	ENST00000468671.1	324	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACTAATGAAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	12881169	12881493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_12881200_12881500
transcript_51404.known	chr16	+	4043	2	FSM	ENSG00000237515.9	ENST00000423335.2	4043	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCTGAGCATTTTCATTA	131	False	NA	20	True	AATAAA	-23	NA	12901756	12911650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_12902628_12908478
transcript_51414.nnic	chr16	+	850	4	NNC	ENSG00000262801.6	novel	997	5	NA	NA	6584	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_2	4.98887651569859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTAAACCAATGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	13355312	13562918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13355700_13355797_13355917_13474209_13474342_13562706
transcript_5142.known	chr1	+	2467	7	FSM	ENSG00000162374.18	ENST00000371819.1	2467	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.12310562561766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAATTTTCCTTTTGATC	68	False	NA	NA	False	ATTAAA	-3	NA	50109705	50202294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_50109965_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
transcript_51420.known	chr16	+	1032	4	FSM	ENSG00000262801.6	ENST00000574540.2	1032	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	7.54247233265651	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTTTCTCTGTCATAGG	NA	False	NA	NA	False	ATTAAA	-16	NA	13246233	13563012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_13246391_13350179_13350617_13474209_13474342_13562706
transcript_51423.nnic	chr16	+	860	3	NNC	ENSG00000262801.6	novel	997	5	NA	NA	6672	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTAAACCAATGTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	13355400	13562918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13355917_13474209_13474342_13562706
transcript_51424.nnic	chr16	+	954	3	NNC	ENSG00000262801.6	novel	997	5	NA	NA	6672	0	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_1	2	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTTTCTCTGTCATAGG	NA	False	NA	NA	False	ATTAAA	-16	NA	13355400	13563012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13355917_13474209_13474342_13562706
transcript_51430.known	chr16	+	6764	11	FSM	ENSG00000175595.16	ENST00000311895.8	6764	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	16.4085343647749	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTGTTTAATTCAT	-16	True	NA	17	True	AATAAA	-28	NA	13920153	13952348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145_13935744_13937765_13937859_13944722_13944836_13947613
transcript_51433.known	chr16	+	2803	8	FSM	ENSG00000175595.16	ENST00000683407.1	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	6.20730313782869	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTTCTCTGTTTA	-12	True	NA	NA	False	NA	NA	NA	13920157	13936727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
transcript_51438.known	chr16	+	2073	6	FSM	ENSG00000175595.16	ENST00000575156.5	2073	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	5.57135531087365	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAATATCCTTTTTAA	-13	True	NA	NA	False	AATAAA	-17	NA	13920156	13933247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156
transcript_51441.known	chr16	+	604	3	FSM	ENSG00000175595.16	ENST00000576348.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTGAGATCTACTG	21	True	NA	NA	False	NA	NA	NA	13920190	13926801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_13920373_13922030_13922212_13926560
transcript_51454.known	chr16	+	4351	3	FSM	ENSG00000186260.17	ENST00000572400.5	4351	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	12.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACAAAAAATTAGCC	-2	True	NA	NA	False	NA	NA	NA	14071321	14144785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14071366_14079289_14079355_14140543
transcript_51455.nnic	chr16	-	416	3	Antisense	novelGene_ENSG00000201075.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	14.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCTTTGGCTTTTCTT	-16	True	NA	NA	False	AATAAA	-15	NA	14283988	14251833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_14252007_14255987_14256104_14283861
transcript_51457.known	chr16	+	5365	2	FSM	ENSG00000262454.4	ENST00000641433.1	5365	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTCCTTCCTTTCTCT	11	True	NA	15	True	AATAAA	-23	NA	14302287	14331067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14302598_14326012
transcript_51458.known	chr16	-	2552	25	FSM	ENSG00000140694.17	ENST00000652051.1	2552	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	121.473526779843	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTCTCGCACTGA	1	True	NA	NA	False	NA	NA	NA	14630235	14436311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14558372_14558490_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_51459.known	chr16	-	3071	24	FSM	ENSG00000140694.17	ENST00000437198.7	3071	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	77.9885358256381	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	3810	False	14630279	-1	True	ATTAAA	-16	NA	14630260	14435700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_51460.known	chr16	-	2100	24	FSM	ENSG00000140694.17	ENST00000341484.11	2100	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	104.369110148162	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACCAAGTTGTCTCCTG	3	True	NA	NA	False	NA	NA	NA	14630276	14436604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630189
transcript_51462.known	chr16	-	2360	23	FSM	ENSG00000140694.17	ENST00000420015.6	2360	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	79.5348694255888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCGGTTAGTCTCCCAGT	3811	False	14630279	NA	False	NA	NA	NA	14630259	14436272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627137_14628190_14628252_14629596_14629675_14630106
transcript_51465.nic	chr16	-	1630	19	NIC	ENSG00000140694.17	novel	1988	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	115.459896303093	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGGACTTGTAGTTT	3782	False	NA	NA	False	AATAAA	-38	NA	14630288	14576071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_14576277_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_51468.nic	chr16	-	1636	18	ISM	ENSG00000140694.17	ENST00000651027.1	1740	22	-41	29055	-6	-4591	5prime_fragment	FALSE	canonical	0	0	junction_15	88.8334626311785	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCTAGACGTAGTATAG	3782	False	NA	NA	False	ATTAAA	-29	NA	14630288	14580662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_51476.known	chr16	-	3075	24	FSM	ENSG00000140694.17	ENST00000650960.1	3075	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	122.435415635715	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTAATTCTCAGTGGT	3771	False	NA	NA	False	AATAAA	-1	NA	14630299	14460722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14461835_14482269_14482389_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_51479.nic	chr16	-	1061	4	NIC	ENSG00000140694.17	novel	598	6	NA	NA	-6	560	intron_retention	FALSE	canonical	0	0	junction_1	182.736604616225	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGAATTAAGGAATAAGA	3782	False	NA	NA	False	NA	NA	NA	14630288	14626615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_14627337_14628171_14628252_14629596_14629675_14630106
transcript_51482.known	chr16	-	2879	23	FSM	ENSG00000140694.17	ENST00000651049.1	2879	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	104.449046457041	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTTTCTGATGCTTTAA	28	True	NA	NA	False	AATAAA	-15	NA	14630208	14460708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14461835_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_51490.known	chr16	+	2903	8	FSM	ENSG00000103429.11	ENST00000261658.7	2903	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	56.9346205784158	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAGAGAAAAAGCAATT	16	True	NA	NA	False	AATAAA	-30	NA	14632950	14669236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803_14649974_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_51508.known	chr16	+	1662	6	FSM	ENSG00000103429.11	ENST00000563971.5	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	94.7641282342638	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTCTGTCTTATTGAAG	-4	True	NA	23	True	CATAAA	-31	NA	14632930	14668350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14633019_14644273_14644610_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_5151.known	chr1	-	6821	19	FSM	ENSG00000185104.21	ENST00000396153.7	6821	19	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_9	30.3795435559303	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGTCTATAAACTCT	0	True	NA	NA	False	AATAAA	-17	NA	50960267	50437027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_50441524_50475463_50475680_50490587_50490666_50491720_50491802_50535368_50535458_50539591_50539729_50567076_50567232_50582617_50582700_50583651_50583716_50584684_50584812_50596120_50596217_50655441_50655529_50705785_50705892_50738862_50738955_50744683_50744776_50787999_50788206_50801630_50801678_50857928_50857998_50959766
transcript_51523.known	chr16	+	1414	4	FSM	ENSG00000103429.11	ENST00000562442.5	1414	4	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_3	13.0213499897497	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTATTTTGTGTCTG	-3	True	NA	15	True	TATAAA	-14	NA	14632931	14650589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803
transcript_51526.known	chr16	+	1177	3	FSM	ENSG00000103429.11	ENST00000566520.5	1177	3	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	137	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGACGTTTGATATAAA	-4	True	NA	-18	True	NA	NA	NA	14632930	14650556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14633019_14644273_14644610_14649803
transcript_5153.known	chr1	+	995	2	FSM	ENSG00000123080.12	ENST00000371761.4	995	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACATTTTTCTGTGATTTT	-11	True	NA	17	True	ATTAAA	-18	NA	50970244	50974634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_50970498_50973892
transcript_51533.known	chr16	-	587	5	FSM	ENSG00000069764.10	ENST00000567462.1	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.60232526704263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAGTACAACTTAAAG	NA	False	NA	NA	False	NA	NA	NA	14694276	14672680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14672750_14678644_14678761_14688164_14688272_14690494_14690646_14694132
transcript_51534.nnic	chr16	-	670	5	NNC	ENSG00000069764.10	novel	587	5	NA	NA	32	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	7.92148975887743	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694244	14672547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_14672750_14678644_14678743_14688164_14688272_14690494_14690646_14694132
transcript_51538.known	chr16	-	636	4	FSM	ENSG00000069764.10	ENST00000438167.8	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1.69967317119759	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694308	14672547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14672750_14688164_14688272_14690494_14690646_14694132
transcript_51539.nnic	chr16	-	508	3	NIC	ENSG00000069764.10	novel	636	4	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	9	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694331	14672547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_14672750_14688164_14688272_14694132
transcript_51540.nnic	chr16	-	470	3	NIC	ENSG00000069764.10	novel	636	4	NA	NA	27	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	7.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694249	14672547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_14672750_14690494_14690646_14694132
transcript_51541.nnic	chr16	-	745	4	NNC	ENSG00000254609.1	novel	355	3	NA	NA	-77	17951	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.9566858950296	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCACTTGTCTGGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	14733424	14709330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_14709644_14727281_14727389_14729611_14729763_14733250
transcript_51543.nnic	chr16	+	1525	8	NNC	ENSG00000254852.8	novel	954	7	NA	NA	382	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	76.2166621667253	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	14751194	14765413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14751730_14755191_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607_14763644_14765002
transcript_51546.known	chr16	-	706	2	FSM	ENSG00000255277.3	ENST00000542005.2	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGAGCCTTTCTGCTC	NA	False	NA	-24	True	AATAAA	-13	NA	14824702	14822431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14823069_14824633
transcript_51547.known	chr16	+	4312	31	FSM	ENSG00000103512.16	ENST00000287667.12	4312	31	0	0	0	0	multi-exon	TRUE	canonical	3	934	junction_11	364.893836920031	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAGATGTATTTCTTGGA	3	True	NA	24	True	AATAAA	-29	NA	14833720	14896157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14834017_14838406_14838497_14841361_14841408_14844673_14844775_14846576_14846684_14848898_14848972_14852429_14852583_14853466_14853605_14853936_14854027_14857216_14857323_14857504_14857656_14863012_14863188_14864584_14864727_14865023_14865156_14866554_14866692_14868547_14868636_14871620_14871685_14872233_14872330_14875035_14875255_14875339_14875423_14876358_14876519_14876663_14876791_14878720_14878835_14880014_14880143_14881543_14881686_14882593_14882678_14884371_14884483_14886760_14886863_14889095_14889216_14894997_14895091_14895513
transcript_51552.nic	chr16	+	1552	8	NIC	ENSG00000183426.17	novel	657	6	NA	NA	385	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	115.380647760147	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	14937827	14952056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_14938359_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219_14950256_14951614
transcript_51555.known	chr16	+	4598	23	FSM	ENSG00000179889.20	ENST00000396410.9	4598	23	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_18	97.9217620736234	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGCCTGAATTAGTAAGA	17	True	NA	NA	False	AATAAA	-17	NA	14975025	15038332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_51556.known	chr16	+	2683	22	FSM	ENSG00000179889.20	ENST00000627450.2	2683	22	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	176.994612829096	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCCCGTGGCAACTTTT	12	True	NA	NA	False	NA	NA	NA	14975128	15036604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14975221_14997752_14997827_14998342_14998406_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_51564.nic	chr16	+	2454	17	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-41	5034	-16	0	5prime_fragment	FALSE	canonical	3	502	junction_16	78.7747728892315	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGCT	-10	True	NA	NA	False	NA	NA	NA	14975063	15032653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734
transcript_51565.known	chr16	+	2048	17	FSM	ENSG00000179889.20	ENST00000535621.6	2048	17	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_16	157.912740441517	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGACCTAACTCCATCTAA	3	True	NA	NA	False	AATAAA	-41	NA	14975011	15139339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15138878
transcript_51568.nnic	chr16	+	2240	17	NNC	ENSG00000179889.20	novel	2048	17	NA	NA	-16	22229	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_16	171.049232222042	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTGCCTGGGAGATTT	-10	True	NA	NA	False	AATAAA	-25	NA	14975063	15161568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15160863
transcript_51570.nnic	chr16	+	2589	17	NNC	ENSG00000179889.20	novel	2048	17	NA	NA	-16	179	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_16	172.375124637373	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAACTGGCTGTGGTGGCT	-10	True	NA	NA	False	AATAAA	-36	NA	14975063	15139518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030410_15138817
transcript_51573.nic	chr16	+	2268	15	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-41	7882	-16	0	5prime_fragment	FALSE	canonical	3	555	junction_4	72.4053217121842	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTCTAAGTAATCAGAC	-10	True	NA	NA	False	CATAAA	-19	NA	14975063	15029805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877
transcript_51577.nic	chr16	+	1328	13	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-41	14881	-16	5419	5prime_fragment	FALSE	canonical	3	555	junction_4	73.8682667546311	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTTGAATGATTTTAG	-10	True	NA	8	True	AATATA	-18	NA	14975063	15022806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703
transcript_51578.nic	chr16	+	1431	13	ISM	ENSG00000179889.20	ENST00000570001.5	4828	22	-41	14778	-16	5522	5prime_fragment	FALSE	canonical	3	555	junction_4	73.8682667546311	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAACAAAAAAACCTGCT	-10	True	NA	111	True	AGTAAA	-30	NA	14975063	15022909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703
transcript_5158.known	chr1	+	3074	3	FSM	ENSG00000123091.5	ENST00000242719.4	3074	3	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	40.5	793	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAAAGTTAGAGTTGAT	-18	True	NA	11	True	AATAAA	-20	NA	51236272	51273447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51236880_51269955_51270126_51271150
transcript_51585.known	chr16	+	884	9	FSM	ENSG00000179889.20	ENST00000562119.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	231.022590886692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGGCCTTCCAGAAAGG	15	False	NA	NA	False	GGGGCT	-25	NA	14975088	15036197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001789_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_51588.nic	chr16	+	1030	6	ISM	ENSG00000179889.20	ENST00000455313.6	2183	14	-16	22907	-16	474	5prime_fragment	FALSE	canonical	3	555	junction_4	99.1390942060699	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAAGTATAGTTTAT	-10	True	NA	NA	False	AATATA	-16	NA	14975063	15006898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393
transcript_51591.nnic	chr16	+	918	3	NNC	ENSG00000179889.20	novel	283	3	NA	NA	-5	-20396	at_least_one_novel_splicesite	TRUE	canonical	3	3	junction_2	4	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTATGCGATCATCATT	1	True	NA	NA	False	TTTAAA	-27	NA	14975074	14977966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14975221_14976199_14976306_14977300
transcript_51593.nnic	chr16	+	1336	3	NNC	ENSG00000179889.20	novel	283	3	NA	NA	-5	-19978	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	4	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTATATTATTATTATT	1	True	NA	NA	False	ATTAAA	-19	NA	14975074	14978384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14975221_14976199_14976306_14977300
transcript_51594.nic	chr16	+	231	2	ISM	ENSG00000179889.20	ENST00000565362.5	720	7	-88	11014	-16	-536	5prime_fragment	FALSE	canonical	3	758	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTAGGACAGAGGTGAC	-10	True	NA	NA	False	NA	NA	NA	14975063	14997826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_14975221_14997752
transcript_51599.nnic	chr16	-	1187	10	NNC	ENSG00000157045.9	novel	1210	10	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	250.581595099219	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	-17	True	NA	-4	True	AATAAA	-17	NA	15055815	15037856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055654
transcript_5160.known	chr1	-	870	1	FSM	ENSG00000233406.5	ENST00000480705.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGGGTTTTTAGACAAGG	NA	False	NA	NA	False	NA	NA	NA	51251472	51250602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51250600_51251500
transcript_51600.nic	chr16	-	1174	10	NIC	ENSG00000157045.9	novel	1210	10	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	250.581595099219	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	222	False	NA	-4	True	AATAAA	-17	NA	15055888	15037856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055740
transcript_51601.known	chr16	-	1210	10	FSM	ENSG00000157045.9	ENST00000287706.8	1210	10	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_9	106.15397621694	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	0	True	NA	-4	True	AATAAA	-17	NA	15056074	15037856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055890
transcript_51603.known	chr16	-	1043	9	FSM	ENSG00000157045.9	ENST00000565187.5	1043	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	231.834497810399	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTATTTTGGCAAAGGC	-14	True	NA	-21	True	NA	NA	NA	15056027	15037873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15055890
transcript_51606.known	chr16	-	1049	8	FSM	ENSG00000157045.9	ENST00000622833.4	1049	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	252.971967471755	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	-5	True	NA	-1	True	AATAAA	-20	NA	15056079	15037853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15055890
transcript_51609.known	chr16	-	339	4	FSM	ENSG00000157045.9	ENST00000567420.1	339	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	347.347088659168	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCATAGGTGAATTGAG	11	True	NA	NA	False	CATAAA	-45	NA	15055787	15047427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15047551_15047854_15047921_15047996_15048100_15055740
transcript_5161.known	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000413473.6	2718	18	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_17	9.96776812451429	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-3	True	NA	1	True	NA	NA	NA	51345116	51287257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51344990
transcript_51610.known	chr16	-	3706	18	FSM	ENSG00000085721.13	ENST00000198767.11	3706	18	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_6	20.9454721304669	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTCAATTTCTGTTT	NA	False	NA	-24	True	AATAAA	-16	NA	15094272	15060032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_51611.known	chr16	-	2198	17	FSM	ENSG00000085721.13	ENST00000429751.6	2198	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	44.2236856786044	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTAATATAGGCAGCA	7	False	NA	NA	False	NA	NA	NA	15094249	15061427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15091314_15091372_15092508_15092615_15094144
transcript_51615.nic	chr16	-	771	3	ISM	ENSG00000085721.13	ENST00000564131.1	1001	10	-58	14439	0	-14439	5prime_fragment	FALSE	canonical	3	226	junction_2	3	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCACTGATTCAGCATT	NA	False	NA	NA	False	TTTAAA	-30	NA	15094311	15090873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_15091372_15092508_15092615_15094144
transcript_51616.known	chr16	-	2128	19	FSM	ENSG00000085721.13	ENST00000563559.5	2128	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	53.5880779536403	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCTTTCAATTTCTGT	NA	False	NA	-26	True	AATAAA	-14	NA	15094311	15060034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15060174_15061788_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_51619.known	chr16	-	2493	8	FSM	ENSG00000250251.6	ENST00000424133.2	2493	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_7	52.2122825490286	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCCCACAAAGAAAAGCT	NA	False	NA	NA	False	NA	NA	NA	15131499	15126658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15127597_15127686_15127898_15127991_15128136_15128221_15128390_15129881_15130078_15130201_15130455_15130634_15130792_15131073
transcript_51620.nnic	chr16	-	1552	8	NNC	ENSG00000183793.14	novel	1084	8	NA	NA	386	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	119.262016465548	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	422	False	NA	NA	False	AATAAA	-21	NA	15377908	15363627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15377377
transcript_51622.known	chr16	+	1854	5	FSM	ENSG00000166780.11	ENST00000566490.5	1854	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	80.5306618624236	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTACTTTTTTTCTTGA	NA	False	NA	19	True	AATAAA	-31	NA	15434474	15587972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15586716
transcript_51623.known	chr16	+	2111	6	FSM	ENSG00000166780.11	ENST00000300006.9	2111	6	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	27.1366910289372	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGTCTGTTTAGTAA	-2	True	NA	11	True	ATTAAA	-37	NA	15434587	15588259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15586716
transcript_51624.known	chr16	+	865	5	FSM	ENSG00000166780.11	ENST00000564389.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	84.0873801470827	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAAGTTTTTACTTTT	NA	False	NA	11	True	AATAAA	-23	NA	15515304	15587964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15587495
transcript_5163.known	chr1	-	5163	25	FSM	ENSG00000085832.17	ENST00000371733.8	5163	25	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_16	25.1553161489884	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-8	True	NA	-9	True	AATAAA	-20	NA	51519266	51354262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51448045_51448136_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_51630.known	chr16	-	7730	27	FSM	ENSG00000166783.22	ENST00000396368.8	7730	27	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	10.5867087598962	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTTTCCCAAGTGAG	-22	True	NA	-18	True	AATAAA	-20	NA	15643154	15594386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625801_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
transcript_51634.nnic	chr16	+	2808	10	NNC	ENSG00000072864.16	novel	5861	10	NA	NA	-6	1423	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	19.0146142626022	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTTGTTGGGCTTC	-10	True	NA	26	True	AATAAA	-16	NA	15650238	15701914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15699728_15700631_15701054
transcript_51637.known	chr16	+	3203	9	FSM	ENSG00000072864.16	ENST00000396354.6	3203	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	7.07106781186548	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGTTTTTTTTCTTTT	-4	True	NA	18	True	AATAAA	-20	NA	15650244	15726353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
transcript_51639.nic	chr16	+	1112	8	ISM	ENSG00000072864.16	ENST00000396354.6	3203	9	-6	29427	-6	-3004	5prime_fragment	FALSE	canonical	3	42	junction_5	6.92525693916618	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCAGCCCACAGCCATG	-10	True	NA	NA	False	NA	NA	NA	15650238	15696926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708
transcript_51640.known	chr16	+	5693	9	FSM	ENSG00000072864.16	ENST00000674588.1	5693	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	20.5715215771707	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTTTGGATTTATAGT	-21	True	NA	NA	False	NA	NA	NA	15650227	15734462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15724190_15727001_15732484
transcript_51646.known	chr16	-	565	4	FSM	ENSG00000133393.13	ENST00000575744.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	275.778091144956	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTGAGATGGA	-3	True	NA	48	True	AAAAAG	-21	NA	15888603	15867219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15888557
transcript_51652.known	chr16	-	2264	5	FSM	ENSG00000133393.13	ENST00000255759.11	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_3	34.2928563989645	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCAAAGGGTGTTC	-3	True	NA	-11	True	AATAAA	-17	NA	15888603	15865718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15884007_15884206_15888557
transcript_51653.known	chr16	-	2039	3	FSM	ENSG00000133393.13	ENST00000573968.5	2039	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	274	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGCAAAGGGTGT	-2	True	NA	-13	True	AATAAA	-15	NA	15888602	15865720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15884007_15884206_15888557
transcript_51654.known	chr16	-	530	4	FSM	ENSG00000133393.13	ENST00000575073.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	247.958777936083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGTTTCTACAAAACAC	9277	False	NA	-70	True	NA	NA	NA	15888625	15867337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15879803_15879889_15884007_15884206_15888557
transcript_51655.known	chr16	-	796	6	FSM	ENSG00000133393.13	ENST00000572415.5	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	280.28171542218	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTACATTTGTGAATAAAA	9279	False	NA	-39	True	AAAACA	-13	NA	15888623	15867306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15882948_15883049_15884007_15884206_15888557
transcript_51656.nic	chr16	+	2380	4	ISM	ENSG00000103222.20	ENST00000676806.1	3077	9	13795	-17	13795	0	3prime_fragment	FALSE	canonical	3	249	junction_2	14.0791413879619	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTATTTCTTTCTAA	NA	False	NA	16	True	AGTAAA	-19	NA	16134371	16143053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_16134509_16136477_16136645_16138363_16138559_16141172
transcript_51657.known	chr16	-	714	2	FSM	ENSG00000091262.17	ENST00000575728.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	26	False	NA	NA	False	AATAAA	-21	NA	16223467	16221186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_16221832_16223398
transcript_5166.known	chr1	-	1773	9	FSM	ENSG00000085832.17	ENST00000371727.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.7528139059899	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	13	True	NA	NA	False	NA	NA	NA	51519245	51457535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51458734_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_51665.known	chr16	+	1459	1	FSM	ENSG00000257563.1	ENST00000549796.1	1459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCACCATTCGAGTTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	18402145	18403604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_18402100_18403600
transcript_51666.known	chr16	-	4235	31	FSM	ENSG00000185164.15	ENST00000622306.5	4235	31	0	0	0	0	multi-exon	TRUE	canonical	3	575	junction_20	416.278967627346	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATAGATGTATTTCTT	-1	True	NA	NA	False	AATAAA	-26	NA	18562097	18499926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
transcript_51667.known	chr16	+	2943	11	FSM	ENSG00000256340.9	ENST00000546162.6	2943	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.2865780427261	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATTTGTTGAAGAAAATAA	NA	False	NA	40	True	AATAAA	-15	NA	18571187	18598328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_18571312_18572876_18573061_18574319_18574436_18574760_18574887_18575025_18575155_18580209_18580336_18582405_18582468_18585805_18585938_18591103_18591308_18592538_18592717_18596766
transcript_51669.known	chr16	+	796	2	FSM	ENSG00000256340.9	ENST00000565118.2	813	2	0	17	0	-17	multi-exon	FALSE	canonical	3	47	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	18571161	18573522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_18571312_18572876
transcript_51685.known	chr16	-	2203	5	FSM	ENSG00000134419.15	ENST00000322989.8	2203	5	0	0	0	0	multi-exon	FALSE	canonical	3	1333	junction_4	5357.45718601652	28791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTGTTGTCACCATT	-4	True	NA	-4	True	AATAAA	-18	NA	18790334	18781294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790243
transcript_5169.known	chr1	-	987	5	FSM	ENSG00000085832.17	ENST00000493793.1	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	8.13557004763649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAAAGAGGTAAAAAATG	-7	True	NA	NA	False	AATAGA	-3	NA	51422104	51403428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785
transcript_51693.known	chr16	-	2278	6	FSM	ENSG00000170540.15	ENST00000304414.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	3644	junction_2	115.149641771045	7848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTCACTTTCTTTATA	-2	True	NA	-19	True	AATAAA	-16	NA	18801549	18791668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
transcript_51694.known	chr16	-	802	5	FSM	ENSG00000134419.15	ENST00000565420.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	5826.7977644243	15132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	8517	False	NA	-36	True	AATAAA	-13	NA	18790260	18782968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18789896
transcript_51695.known	chr16	-	418	4	FSM	ENSG00000134419.15	ENST00000574723.5	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	4949.11610514668	2978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCACTTGGTCGTTTTG	8415	False	NA	-29	True	AATAAA	-20	NA	18790362	18782961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788980_18789119_18790309
transcript_51696.known	chr16	-	589	6	FSM	ENSG00000134419.15	ENST00000576008.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	5772.98106700516	3257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	8415	False	NA	-35	True	AATAAA	-14	NA	18790362	18782967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18786239_18786337_18788062_18788143_18788980_18789119_18790309
transcript_51697.known	chr16	-	481	5	FSM	ENSG00000134419.15	ENST00000569365.6	481	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	5447.53280738171	3383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-4	True	NA	-35	True	AATAAA	-14	NA	18790334	18782967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788160_18788980_18789119_18790309
transcript_51698.known	chr16	-	427	5	FSM	ENSG00000134419.15	ENST00000562935.5	427	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	5365.30625290859	2773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-4	True	NA	-35	True	AATAAA	-14	NA	18790334	18782967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788106_18788980_18789119_18790309
transcript_51699.known	chr16	-	2190	4	FSM	ENSG00000134419.15	ENST00000576436.5	2190	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6561.6819659461	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	9640	False	NA	-35	True	AATAAA	-14	NA	18789137	18782967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18784824_18786239_18786337_18788062_18788143_18788980
transcript_517.known	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4143	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_-_1500_1800
transcript_51700.known	chr16	-	606	2	FSM	ENSG00000134419.15	ENST00000573554.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	6512	junction_1	0	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCAGCCTGGGCGACAG	8437	False	NA	NA	False	NA	NA	NA	18790340	18788543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18789119_18790309
transcript_51701.known	chr16	-	581	3	FSM	ENSG00000170540.15	ENST00000567969.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	3779	junction_1	104.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTTTACATTTCCAT	3	True	NA	NA	False	NA	NA	NA	18801544	18797711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18798045_18798700_18798835_18801430
transcript_51702.known	chr16	-	764	7	FSM	ENSG00000260342.2	ENST00000567078.2	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	4491.81214359342	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAACGAGTGATCTACA	28	False	NA	NA	False	NA	NA	NA	18801519	18788062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18788143_18788980_18789119_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
transcript_51704.known	chr16	-	16062	63	FSM	ENSG00000157106.18	ENST00000446231.7	16062	63	0	0	0	0	multi-exon	TRUE	canonical	2	26	junction_48	46.2788791070482	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCATTTAAGTTCTGAA	6477	False	NA	-7	True	AATAAA	-18	NA	18926408	18804859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18809647_18811760_18811868_18811947_18812128_18815174_18815282_18815439_18815652_18816301_18816530_18817290_18817471_18819501_18819655_18828030_18828169_18829285_18829756_18829925_18830116_18830218_18830370_18832939_18833167_18834203_18834439_18834891_18835165_18835932_18836213_18836359_18836533_18837252_18837444_18838013_18838233_18838356_18838467_18838550_18838690_18839697_18839947_18841564_18841795_18842207_18842455_18845428_18845652_18847452_18847608_18847815_18848034_18849216_18849379_18849948_18850127_18850236_18850468_18852066_18852206_18852317_18852463_18853582_18853868_18854655_18854905_18858169_18858291_18859021_18859182_18859555_18859704_18860666_18860777_18863649_18863852_18864001_18864145_18866620_18866776_18868189_18868355_18868522_18868720_18869103_18869304_18869853_18869995_18870609_18870712_18870800_18870889_18871363_18871483_18872183_18872346_18872493_18872625_18876123_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18925949
transcript_51705.known	chr16	+	2642	6	FSM	ENSG00000167186.11	ENST00000321998.10	2642	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	5.38144961882948	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGATCTGCTCTTTAA	-1	True	NA	80	True	AATAAA	-22	NA	19067613	19080095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19067738_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_51706.known	chr16	+	819	6	FSM	ENSG00000167186.11	ENST00000544894.6	819	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	28.9896533266612	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTGTTGATTTTTC	9	True	NA	21	True	AATAAA	-29	NA	19067916	19078304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19068009_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_51708.known	chr16	+	584	2	FSM	ENSG00000167186.11	ENST00000567314.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGACTGTGGTATTTTGT	986	False	NA	10	True	AATAAA	-21	NA	19078591	19079262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19078900_19078986
transcript_51709.known	chr16	+	2575	6	FSM	ENSG00000167186.11	ENST00000569127.1	2575	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	28.203545876361	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGACTGTGGTATTTTGT	81	False	NA	10	True	AATAAA	-21	NA	19067988	19079262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19068879_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_51711.known	chr16	+	2546	5	FSM	ENSG00000261210.8	ENST00000636231.2	2546	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.11803398874989	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAATTTTTATTTTTATT	0	True	NA	NA	False	GATAAA	-11	NA	19285730	19310947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19285940_19298672_19298839_19304061_19304156_19307544_19307678_19309003
transcript_5172.known	chr1	+	3660	24	FSM	ENSG00000117859.19	ENST00000428468.6	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	183.922766728274	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACTGCAGTTTATTTAT	3	True	NA	6	True	CATAAA	-44	NA	51617091	51789219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_51720.nnic	chr16	-	648	3	NNC	ENSG00000260592.2	novel	698	3	NA	NA	52	16893	intron_retention	FALSE	canonical	0	0	junction_1	2.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTGTTTTTCTCTTTCC	-9	True	NA	NA	False	AATGAA	-23	NA	19487912	19460022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_19460190_19486928_19487321_19487823
transcript_51722.known	chr16	-	633	3	FSM	ENSG00000260592.2	ENST00000561762.2	698	3	65	0	65	0	multi-exon	FALSE	canonical	1	1	junction_1	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAACTCCTCATCTTCCC	4	True	NA	NA	False	NA	NA	NA	19487899	19476915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19477081_19486928_19487321_19487823
transcript_51723.known	chr16	+	3581	21	FSM	ENSG00000103534.17	ENST00000541464.5	3581	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.98089185987261	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAATACCTGGATTGC	35	False	NA	NA	False	AGTAAA	-18	NA	19410538	19498140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19410774_19430412_19430641_19439959_19440827_19444080_19444251_19449541_19449632_19460234_19460335_19463279_19463368_19463775_19464025_19466081_19466234_19469680_19469826_19474124_19474277_19477439_19477519_19479430_19479529_19481369_19481466_19486944_19487021_19487192_19487327_19490394_19490569_19492149_19492229_19494261_19494367_19497120_19497164_19497919
transcript_51726.known	chr16	-	2238	6	FSM	ENSG00000006007.12	ENST00000564172.1	2238	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	88.843682949324	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAACTAGAAC	-18	True	NA	NA	False	NA	NA	NA	19522123	19502382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517186_19521703
transcript_51737.known	chr16	+	510	2	FSM	ENSG00000260934.1	ENST00000569345.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGGATTGAGTAAGATAA	3078	False	NA	NA	False	NA	NA	NA	19501688	19502286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19501890_19501977
transcript_51739.known	chr16	+	5446	15	FSM	ENSG00000103540.16	ENST00000381396.9	5446	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_13	22.9241206183018	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	-21	True	NA	NA	False	AATAAA	-20	NA	19523856	19553408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19548514_19548601_19551195
transcript_51742.known	chr16	+	3606	31	FSM	ENSG00000103544.16	ENST00000417362.7	3606	31	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	35.2954041704519	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCTCCAGAAGAGAAAGA	-10	True	NA	55	True	NA	NA	NA	19555702	19701163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19616113_19616192_19616685_19616809_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19650381_19650460_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19699501_19699649_19700377
transcript_51749.known	chr16	+	557	4	FSM	ENSG00000103544.16	ENST00000543460.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	68.585712797929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTCATGTAGTATGTCAG	7	True	NA	NA	False	NA	NA	NA	19555719	19573380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118
transcript_5175.known	chr1	+	3352	26	FSM	ENSG00000117859.19	ENST00000371714.5	3352	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	238.770403526065	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	10	False	NA	20	True	CATAAA	-29	NA	51577178	51788469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51577257_51598123_51598194_51614304_51614420_51616873_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_51753.known	chr16	+	920	8	FSM	ENSG00000174628.16	ENST00000564955.5	920	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	21.1775776688073	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACTTGGAACATGTGC	-14	True	NA	NA	False	NA	NA	NA	19718278	19856641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19718488_19733697_19733828_19735352_19735451_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_51758.known	chr16	+	280	3	FSM	ENSG00000174628.16	ENST00000568061.1	280	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	28	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGTAAGCTGGTATCAT	NA	False	NA	5	True	AATAAA	-17	NA	19827063	19857585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19827138_19856486_19856562_19857454
transcript_51759.known	chr16	+	946	8	FSM	ENSG00000174628.16	ENST00000561839.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	26.467538839962	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTTCACTTTCTGCAT	22	True	NA	NA	False	AAGAAA	-4	NA	19718314	19856736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19763901_19764034_19764113_19788837_19788923_19827025_19827138_19856486
transcript_51760.known	chr16	+	1915	7	FSM	ENSG00000174628.16	ENST00000568300.6	1915	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	26.9814751264641	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCCTTAGCTCTTCATC	-10	True	NA	6	True	AATAAA	-20	NA	19718282	19857539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19718488_19730429_19730495_19733697_19733828_19763847_19764113_19788837_19788923_19827025_19827138_19856486
transcript_51768.known	chr16	-	6422	5	FSM	ENSG00000103550.14	ENST00000219837.12	6422	5	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_3	34.928498393146	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-20	True	NA	-8	True	AATAAA	-30	NA	19718227	19701936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
transcript_5178.known	chr1	+	2831	23	FSM	ENSG00000117859.19	ENST00000495776.5	2831	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	186.689714732164	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	3	True	NA	20	True	CATAAA	-29	NA	51617091	51788469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51617222_51651990_51652042_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_51786.nic	chr16	-	1204	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-252	3904	-252	635	5prime_fragment	FALSE	canonical	3	752	junction_1	0	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAGGAAAGAGAGTG	320	False	NA	15	True	AAGAAA	-3	NA	19718487	19714163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_19715038_19718157
transcript_51787.nic	chr16	-	1153	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-252	3955	-252	584	5prime_fragment	FALSE	canonical	3	752	junction_1	0	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGTAGAGCAGCCAGTCA	320	False	NA	-36	True	AAAAAG	-15	NA	19718487	19714214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_19715038_19718157
transcript_51789.nic	chr16	-	984	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-252	4124	-252	415	5prime_fragment	FALSE	canonical	3	752	junction_1	0	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGGAGGGAGATGCC	320	False	NA	18	True	AAGAAA	-8	NA	19718487	19714383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_19715038_19718157
transcript_51791.nic	chr16	-	734	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-187	4309	-187	230	5prime_fragment	FALSE	canonical	3	752	junction_1	0	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCCCAGGACCCCACAG	385	False	NA	NA	False	AAAACA	-16	NA	19718422	19714568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_19715038_19718157
transcript_51792.nic	chr16	-	480	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-187	4563	-187	-24	5prime_fragment	FALSE	canonical	3	752	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTGTCAGCACCCTTTG	385	False	NA	NA	False	AAAAAG	-13	NA	19718422	19714822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_19715038_19718157
transcript_51794.known	chr16	-	5144	4	FSM	ENSG00000167191.12	ENST00000300571.7	5144	4	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_2	61.5196445590079	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCTTGTACAGAAAAG	7	True	NA	54	True	ATTAAA	-17	NA	19884848	19856690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19860545_19861836_19861974_19871815_19872847_19884726
transcript_51795.known	chr16	-	2078	2	FSM	ENSG00000167191.12	ENST00000562348.1	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_1	0	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTAGTCTCTGCTGTCT	9947	False	NA	-6	True	AATAAA	-19	NA	19862340	19858970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19860545_19861836
transcript_518.known	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1018	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	2547	2358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_-_2400_2500
transcript_51800.known	chr16	+	2533	14	FSM	ENSG00000005187.12	ENST00000289416.10	2533	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	7.17325737038447	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTTGTGGTTCCTGAA	3	True	NA	NA	False	AATAAA	-17	NA	20764013	20797581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077_20786159_20790586_20790689_20792001_20792130_20792235_20792336_20796369_20796490_20796885
transcript_51802.known	chr16	+	1517	9	FSM	ENSG00000005187.12	ENST00000440284.6	1517	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	4.18143217091943	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCTTCTTGGTCTCCA	-11	True	NA	16	True	TATAAA	-21	NA	20764039	20786314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077
transcript_51813.known	chr16	-	4122	5	FSM	ENSG00000066654.14	ENST00000381337.6	4122	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	118.904110526087	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	NA	False	NA	-16	True	AATAAA	-16	NA	20742084	20733663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20736359_20736859_20737287_20737707_20737957_20738896_20739072_20741508
transcript_51816.known	chr16	-	4357	4	FSM	ENSG00000066654.14	ENST00000396083.7	4357	4	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_2	17.5941909605289	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	-5	True	NA	-16	True	AATAAA	-16	NA	20741818	20733663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20737287_20737707_20737957_20738896_20739072_20741508
transcript_51824.known	chr16	-	2903	10	FSM	ENSG00000196678.14	ENST00000563117.5	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	26.8718954566309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTTATAAGTTCTT	NA	False	NA	NA	False	NA	NA	NA	20806676	20797373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
transcript_51827.known	chr16	-	3502	9	FSM	ENSG00000196678.14	ENST00000357967.9	3502	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	23.9099874529453	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	-10	True	NA	-2	True	AATAAA	-21	NA	20806472	20796339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_51828.known	chr16	-	2646	9	FSM	ENSG00000196678.14	ENST00000569729.5	2646	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	30.0663329157382	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTATGCATTTGT	-14	True	NA	-6	True	AATAAA	-17	NA	20806476	20796343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_51829.known	chr16	-	763	6	FSM	ENSG00000196678.14	ENST00000567859.5	763	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	24.693318934481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTCTAGTTTTATA	16	True	NA	NA	False	NA	NA	NA	20806446	20801146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
transcript_51832.known	chr16	-	230	4	FSM	ENSG00000196678.14	ENST00000563537.5	230	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	34.9094065642295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACACATCAACTGGACAG	-7	True	NA	NA	False	NA	NA	NA	20806469	20802902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20802924_20803432_20803512_20803602_20803671_20806407
transcript_51834.known	chr16	+	2691	20	FSM	ENSG00000005189.20	ENST00000261377.11	2691	20	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	8.8452375404403	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	0	True	NA	11	True	AATAAA	-20	NA	20806526	20849665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_51835.known	chr16	+	2604	19	FSM	ENSG00000005189.20	ENST00000348433.10	2604	19	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	10.2083238851052	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	-6	True	NA	11	True	AATAAA	-20	NA	20806520	20849665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_51841.known	chr16	+	857	5	FSM	ENSG00000102897.10	ENST00000568663.5	857	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	68.854919940408	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCCCTAGAGTTTCTCA	15	True	NA	NA	False	NA	NA	NA	20899901	20924263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900005_20900297_20900536_20915555_20915715_20920121_20920215_20923999
transcript_51843.known	chr16	+	1626	5	FSM	ENSG00000102897.10	ENST00000219168.8	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	56.8391370448215	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	38	False	NA	9	True	AATAAA	-15	NA	20900752	20925004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900890_20902485_20902718_20915555_20915715_20920121_20920215_20923999
transcript_51847.known	chr16	+	1378	4	FSM	ENSG00000102897.10	ENST00000567954.6	1378	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	44.6119067315243	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	-4	True	NA	11	True	AATAAA	-17	NA	20900770	20925006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900890_20915555_20915715_20920121_20920215_20923999
transcript_51850.known	chr16	+	931	4	FSM	ENSG00000102897.10	ENST00000562740.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	63.92356546863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCGGAAGGATGTAAG	3	True	NA	NA	False	NA	NA	NA	20900665	20924381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900890_20902485_20902718_20920121_20920215_20923999
transcript_51854.nic	chr16	+	829	3	ISM	ENSG00000102897.10	ENST00000567954.6	1378	4	-109	4443	-4	-900	5prime_fragment	FALSE	canonical	3	52	junction_1	38	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCATAAAGTAGAAAGTAAA	-1	True	NA	NA	False	AATAAA	-19	NA	20900661	20920563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_20900890_20915555_20915715_20920121
transcript_51860.known	chr16	-	6136	3	FSM	ENSG00000188215.10	ENST00000324344.9	6136	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	5.5	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGATATTTCTACAAAAA	0	True	NA	-24	True	AATAAA	-15	NA	20900358	20854924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20860370_20862107_20862644_20900203
transcript_51862.nic	chr16	+	411	2	ISM	ENSG00000102897.10	ENST00000562740.5	931	4	100	21609	-5	2281	5prime_fragment	FALSE	canonical	3	36	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTCTCCCCCAGGTAC	-9	True	NA	21	True	GATAAA	-14	NA	20900765	20902772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_20900890_20902485
transcript_51864.nnic	chr16	+	506	4	NNC	ENSG00000289640.1	novel	479	2	NA	NA	-8	8817	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGAACTCACAGTTTG	-2	True	NA	NA	False	AATAAA	-20	NA	21116430	21130108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_21116538_21120911_21120990_21129219_21129414_21129981
transcript_51869.known	chr16	+	1378	6	FSM	ENSG00000011638.11	ENST00000451578.6	1378	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	47.4737822381996	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTTTTTTTTTT	10	True	NA	NA	False	NA	NA	NA	21158688	21180220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21161084_21161279_21166839_21166912_21170436_21170606_21174009_21174149_21179474
transcript_5187.nic	chr1	+	2735	21	NIC	ENSG00000117859.19	novel	2210	21	NA	NA	-39	-66	combination_of_known_junctions	FALSE	canonical	3	186	junction_1	133.555456646294	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGTTTAATTAATTATT	2613	False	NA	14	True	ATTAAA	-18	NA	51729768	51788398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_5188.nic	chr1	+	2806	21	NIC	ENSG00000117859.19	novel	2721	20	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_1	133.555456646294	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	2613	False	NA	20	True	CATAAA	-29	NA	51729768	51788469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_51886.known	chr16	+	1717	5	FSM	ENSG00000011638.11	ENST00000233047.9	1717	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	24.4693686064843	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	-5	True	NA	21	True	AATAAA	-27	NA	21158673	21180616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_51893.known	chr16	+	1812	5	FSM	ENSG00000011638.11	ENST00000261388.7	1812	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	12.0415945787923	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTACTGAGTGGTT	0	True	NA	14	True	AATAAA	-20	NA	21158678	21180609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21160977_21161279_21170436_21170606_21174009_21174149_21179474
transcript_51895.known	chr16	+	584	4	FSM	ENSG00000011638.11	ENST00000572258.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	46.2048578494609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGATTATGGCTTAGA	-18	True	NA	NA	False	NA	NA	NA	21158660	21179609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21179474
transcript_519.known	SIRV6	+	1969	1	FSM	SIRV6A	SIRV603	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	918	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8999	10968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_9000_11000
transcript_51900.nic	chr16	+	1758	4	NIC	ENSG00000011638.11	novel	1812	5	NA	NA	-60	0	intron_retention	FALSE	canonical	3	10	junction_3	47.5558151602468	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	5052	False	NA	21	True	AATAAA	-27	NA	21158600	21180616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_21158747_21160977_21161279_21170436_21170606_21179474
transcript_51909.known	chr16	+	4323	2	FSM	ENSG00000175311.7	ENST00000311620.7	4323	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGTTATCAATGTTCT	2	True	NA	NA	False	AATAAA	-21	NA	21233698	21253850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21233902_21249730
transcript_51910.known	chr16	+	1661	3	FSM	ENSG00000189149.12	ENST00000338573.9	1661	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	False	NA	NA	False	NA	NA	NA	21300848	21317948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21301336_21315883_21315971_21316861
transcript_51913.known	chr16	+	3153	5	FSM	ENSG00000197006.15	ENST00000358154.8	3153	5	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_4	148.578893184732	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	-31	True	NA	13	True	AATAAA	-19	NA	21599576	21657471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655226
transcript_51914.known	chr16	+	1817	5	FSM	ENSG00000197006.15	ENST00000396014.8	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	294.169487710741	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAGAAACAAA	34	False	NA	NA	False	NA	NA	NA	21599557	21656119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655229
transcript_5192.known	chr1	+	2210	21	FSM	ENSG00000117859.19	ENST00000531828.5	2210	21	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_6	117.471475261018	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGAAGATGCAAAGTTTA	2652	False	NA	NA	False	NA	NA	NA	51729807	51787789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_51924.known	chr16	-	1151	8	FSM	ENSG00000248124.9	ENST00000551681.2	1178	8	27	0	10	0	multi-exon	FALSE	canonical	2	6	junction_6	24.4365066476953	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	21820410	21810426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819301_21819482_21820294
transcript_51931.nic	chr16	-	786	3	ISM	ENSG00000248124.9	ENST00000692968.1	1001	7	-39	6597	-35	-6594	5prime_fragment	FALSE	canonical	2	6	junction_2	39	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGTTTCAGCATTTCCA	NA	False	NA	NA	False	TTTAAA	-30	NA	21820476	21817020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_21817519_21818655_21818762_21820294
transcript_51932.nic	chr16	-	517	2	ISM	ENSG00000248124.9	ENST00000551681.2	1178	8	-50	8731	-46	-8731	5prime_fragment	FALSE	canonical	3	30	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCACGTAGAGATTTG	NA	False	NA	NA	False	NA	NA	NA	21820487	21819157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_21819482_21820294
transcript_51935.known	chr16	+	1914	14	FSM	ENSG00000140740.11	ENST00000268379.9	1914	14	0	0	0	0	multi-exon	FALSE	canonical	3	888	junction_11	56.5333854340871	2975	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATATTCCCATTCATTC	-10	True	NA	56	True	AATAAA	-38	NA	21953360	21983660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407_21965506_21968627_21968686_21971524_21971621_21971922_21972123_21973895_21973977_21976166_21976244_21980546_21980701_21983087
transcript_51937.nnic	chr16	+	969	4	NIC	ENSG00000185716.12	novel	1359	7	NA	NA	28	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	7.58653778449403	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCATTCCTTTGTT	120	False	NA	13	True	AATAAA	-16	NA	22008236	22087534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_22008408_22075486_22075700_22085643_22085751_22087056
transcript_51939.known	chr16	+	4469	3	FSM	ENSG00000185716.12	ENST00000542527.7	4469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTGAAAT	-6	True	NA	NA	False	AATAAA	-24	NA	22008110	22084654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22008408_22075486_22075700_22080695
transcript_51942.known	chr16	+	695	2	FSM	ENSG00000185716.12	ENST00000562695.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACATAAAAATATAAAT	166	False	NA	NA	False	AATAAA	-15	NA	22008282	22076056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22008408_22075486
transcript_51948.known	chr16	+	7398	18	FSM	ENSG00000103319.12	ENST00000263026.10	7398	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	7.78295538106623	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTCAAATGTCTCC	-24	True	NA	20	True	AATAAA	-20	NA	22206277	22288738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22206680_22225653_22225976_22244629_22244731_22248754_22248816_22250653_22250692_22251150_22251323_22256747_22256898_22257252_22257386_22257642_22257771_22258493_22258696_22260461_22260530_22263109_22263188_22264817_22264881_22266389_22266525_22266687_22266877_22273625_22273751_22280197_22280377_22283886
transcript_51950.known	chr16	-	467	2	FSM	ENSG00000261113.1	ENST00000562376.1	467	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGAGTAGAATTGCGG	9889	False	NA	NA	False	NA	NA	NA	22288736	22286912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_22287074_22288430
transcript_51951.known	chr16	+	3690	21	FSM	ENSG00000058600.16	ENST00000299853.10	3690	21	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	30.5697562960518	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATATGTCTCAGCTT	-11	True	NA	9	True	AGTAAA	-15	NA	22297408	22335096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_51954.known	chr16	+	2464	21	FSM	ENSG00000058600.16	ENST00000564209.5	2464	21	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_19	50.3403168444538	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAAATTCCTGATGTA	-9	True	NA	-56	True	NA	NA	NA	22297410	22333935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332122_22332186_22333643
transcript_51957.known	chr16	+	2469	20	FSM	ENSG00000058600.16	ENST00000359210.8	2469	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_19	44.2218030730997	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTAATATTTTCTT	13	True	NA	34	True	AATAAA	-36	NA	22297432	22334025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22333643
transcript_51959.known	chr16	-	2704	5	FSM	ENSG00000140743.8	ENST00000268383.7	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	3.26917420765551	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGATCTGTGTCTTAC	-16	True	NA	NA	False	AATAAA	-19	NA	22374619	22345935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22364901_22365015_22374230
transcript_5196.known	chr1	+	2721	20	FSM	ENSG00000117859.19	ENST00000361556.9	2721	20	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	128.759368860103	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	2659	False	NA	20	True	CATAAA	-29	NA	51729814	51788469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_51960.known	chr16	+	2661	9	FSM	ENSG00000257838.5	ENST00000550753.5	2661	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11102430216445	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTTAATTTTTTT	9282	False	NA	NA	False	ATTAAA	-12	NA	22545697	22576865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22547057_22552383_22552514_22556842_22557031_22561003_22561160_22568062_22568206_22568506_22568644_22569164_22569263_22573221_22573418_22576611
transcript_51963.nnic	chr16	-	755	3	Antisense	novelGene_ENSG00000122254.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTTGTTTTGTATTCA	NA	False	NA	NA	False	AATAAA	-17	NA	22860273	22846972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_22847397_22850938_22851184_22860187
transcript_51965.nnic	chr16	-	806	3	Antisense	novelGene_ENSG00000122254.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTTGTTTTGTATTCA	NA	False	NA	NA	False	AATAAA	-17	NA	22860273	22846972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_22847397_22850938_22851235_22860187
transcript_51967.known	chr16	+	2329	2	FSM	ENSG00000122254.7	ENST00000261374.4	2329	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGCTTTTCTCTGTAA	-3	True	NA	37	True	AATAAA	-23	NA	22814161	22916338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22815096_22914943
transcript_51970.known	chr16	-	2935	17	FSM	ENSG00000168434.13	ENST00000307149.10	2935	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	15.0244592248773	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTGTTTCCTTCTTCT	-14	True	NA	-1	True	AATAAA	-20	NA	23453189	23388492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
transcript_51977.nnic	chr16	+	822	4	NNC	ENSG00000260136.6	novel	730	3	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.24264068711928	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	NA	False	NA	-5	True	NA	NA	NA	23452727	23457588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23453266_23454735_23454798_23455469_23455531_23457427
transcript_51979.known	chr16	+	730	3	FSM	ENSG00000260136.6	ENST00000570080.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	12.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	NA	False	NA	-5	True	NA	NA	NA	23452757	23457588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23453266_23455469_23455531_23457427
transcript_51982.nnic	chr16	+	920	3	NNC	ENSG00000260136.6	novel	579	2	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	NA	False	NA	10	True	AATAAA	-33	NA	23452727	23455789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23453266_23454735_23454798_23455469
transcript_51984.known	chr16	+	438	2	FSM	ENSG00000260136.6	ENST00000562842.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATAGTCTTTTCTCAT	NA	False	NA	13	True	CATAAA	-16	NA	23453006	23457606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23453266_23457427
transcript_51985.known	chr16	+	579	2	FSM	ENSG00000260136.6	ENST00000565747.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	NA	False	NA	10	True	AATAAA	-33	NA	23453006	23455789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23453266_23455469
transcript_51986.nnic	chr16	+	829	2	NNC	ENSG00000260136.6	novel	658	2	NA	NA	-32	-762	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTGGGATTTTGACAG	NA	False	NA	NA	False	NA	NA	NA	23452725	23455027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23453270_23454742
transcript_51987.nnic	chr16	+	927	2	NNC	ENSG00000260136.6	novel	658	2	NA	NA	-32	-664	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGAAACGCCTCTTCA	NA	False	NA	NA	False	NA	NA	NA	23452725	23455125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23453270_23454742
transcript_51988.nnic	chr16	+	1230	2	NNC	ENSG00000260136.6	novel	658	2	NA	NA	-32	-361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAAATTTATTTATT	NA	False	NA	NA	False	AATACA	-14	NA	23452725	23455428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23453270_23454742
transcript_51989.nnic	chr16	+	1231	2	NNC	ENSG00000260136.6	novel	658	2	NA	NA	-30	-361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAAATTTATTTATT	NA	False	NA	NA	False	AATACA	-14	NA	23452727	23455428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23453266_23454735
transcript_51990.nnic	chr16	+	697	2	NNC	ENSG00000260136.6	novel	579	2	NA	NA	-13	-6	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACATGAATGGAATTT	NA	False	NA	4	True	AATAAA	-27	NA	23452744	23455783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23453128_23455469
transcript_51992.known	chr16	-	5973	17	FSM	ENSG00000103365.15	ENST00000309859.8	5973	17	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	35.1425112043804	919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTGTCGTCTTTTTT	-21	True	NA	-5	True	AATAAA	-15	NA	23510494	23463541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
transcript_51995.known	chr16	-	3840	10	FSM	ENSG00000103356.18	ENST00000674054.1	3840	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	66.727379761808	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAGAAGCAGTATTTTT	-1	True	NA	-5	True	AGTAAA	-17	NA	23557350	23522016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23523418_23523510_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_51996.known	chr16	-	5196	9	FSM	ENSG00000103356.18	ENST00000449606.7	5196	9	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_6	17.1464281994822	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGCTGTGCTATC	-1	True	NA	-28	True	AATAAA	-37	NA	23557350	23520753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_51999.known	chr16	+	1024	1	FSM	ENSG00000260751.2	ENST00000568262.2	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGCCCCACTGTCTT	NA	False	NA	10	True	AATAAA	-23	NA	23568672	23569696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23568700_23569700
transcript_52.known	ERCC-00116	+	1977	1	FSM	ERCC-00116A	DQ668367	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00116_+_0_2000
transcript_520.known	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	10867.1241200237	6980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
transcript_52000.known	chr16	-	599	1	FSM	ENSG00000103356.18	ENST00000564759.1	599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATACATCGTGGCTTC	NA	False	NA	-32	True	AAGAAA	-28	NA	23523645	23523046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23523000_23523600
transcript_52011.known	chr16	-	503	4	FSM	ENSG00000004779.10	ENST00000562133.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1574.63794780472	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	34	False	NA	-27	True	AATAAA	-14	NA	23596277	23581013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23596122
transcript_52012.known	chr16	-	665	5	FSM	ENSG00000004779.10	ENST00000007516.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	3223	junction_2	123.704284485219	10377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-5	True	NA	-27	True	AATAAA	-14	NA	23596316	23581013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
transcript_52013.known	chr16	-	843	6	FSM	ENSG00000004779.10	ENST00000484769.1	843	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1662.9343222148	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATCTATAAAACCAAC	8	True	NA	21	True	TTTAAA	-24	NA	23596303	23581032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23595428_23595639_23596122
transcript_52016.known	chr16	-	4008	13	FSM	ENSG00000083093.10	ENST00000261584.9	4008	13	0	0	0	0	multi-exon	TRUE	canonical	1	44	junction_1	22.4405077680718	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTGGCATGTTATTG	-15	True	NA	-11	True	AATAAA	-17	NA	23641310	23603164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
transcript_52019.known	chr16	-	789	5	FSM	ENSG00000083093.10	ENST00000567003.1	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	53.4666952410564	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTGGGAAAAGACTAAAG	-6	True	NA	NA	False	NA	NA	NA	23641301	23636034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23636335_23637849_23637953_23638069_23638130_23638458_23638593_23641109
transcript_5202.known	chr1	+	2755	20	FSM	ENSG00000117859.19	ENST00000462759.5	2755	20	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	110.341323882907	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	27	False	NA	20	True	CATAAA	-29	NA	51729903	51788469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_52021.nic	chr16	-	1191	4	ISM	ENSG00000083093.10	ENST00000261584.9	4008	13	-7	32350	-7	520	5prime_fragment	FALSE	canonical	3	92	junction_1	16.0831174424198	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTAAAAGAACAAAATCAAA	-22	True	NA	NA	False	AATGAA	-39	NA	23641317	23635514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_23636335_23637849_23637953_23638069_23638130_23641109
transcript_52027.nnic	chr16	+	1567	7	NNC	ENSG00000166847.10	novel	10954	6	NA	NA	-94	-12	at_least_one_novel_splicesite	TRUE	canonical	2	12	junction_6	138.283525169607	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTCTGGAACTGCTT	1870	False	NA	7	True	AATAAA	-18	NA	23641371	23669860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046_23667574_23669442
transcript_52029.known	chr16	+	878	6	FSM	ENSG00000166847.10	ENST00000563998.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	149.418338901221	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGAACAGTCACTTTG	-16	True	NA	103	True	NA	NA	NA	23641470	23667371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667016
transcript_52031.known	chr16	+	10954	6	FSM	ENSG00000166847.10	ENST00000300087.7	10954	6	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_3	24.9158584038359	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTTCAAAGTCTTC	-21	True	NA	28	True	AATAAA	-31	NA	23641465	23677472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046
transcript_52042.known	chr16	+	523	3	FSM	ENSG00000166847.10	ENST00000568272.1	523	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	200	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTTTGCAAGTATAGT	42	False	NA	NA	False	AATAAA	-29	NA	23641528	23651147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23641591_23642954_23643024_23650755
transcript_52043.known	chr16	+	3405	1	FSM	ENSG00000166847.10	ENST00000563614.1	3405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	977	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTTCCTTTTTGTTTT	NA	False	NA	19	True	AATAAA	-30	NA	23666467	23669872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23666500_23669900
transcript_52047.known	chr16	-	759	5	FSM	ENSG00000134398.15	ENST00000562458.2	759	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	2.9474565306379	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAATTTGTAAAATTAG	NA	False	NA	NA	False	NA	NA	NA	23694760	23690637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23691044_23691128_23691197_23691301_23691426_23691962_23692091_23694727
transcript_52049.known	chr16	+	2160	10	FSM	ENSG00000166851.15	ENST00000300093.9	2160	10	0	0	0	0	multi-exon	FALSE	canonical	3	1524	junction_2	137.598449603669	3229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTATTTCCTGAG	-16	True	NA	28	True	ATTAAA	-16	NA	23678888	23690367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
transcript_52050.known	chr16	+	4135	9	FSM	ENSG00000166851.15	ENST00000562272.5	4135	9	0	0	0	0	multi-exon	TRUE	canonical	3	1524	junction_1	145.376182282381	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTGTATTTCCTGA	NA	False	NA	27	True	ATTAAA	-15	NA	23677655	23690366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
transcript_52052.known	chr16	+	2707	17	FSM	ENSG00000166501.14	ENST00000321728.12	2707	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	27.5969172870812	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTGTTTATATGTCTTT	2	True	NA	NA	False	ATTAAA	-19	NA	23835982	24220611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23836349_23837374_23837407_23988507_23988591_24032135_24032248_24035418_24035548_24092790_24092948_24094162_24094298_24112972_24113070_24123834_24123982_24154683_24154858_24172269_24172362_24174517_24174581_24180789_24180929_24185110_24185192_24185459_24185568_24191089_24191231_24219960
transcript_52055.known	chr16	+	1917	4	FSM	ENSG00000006116.4	ENST00000005284.4	1917	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGAGCCGGGGGTGTTTTGT	3	True	NA	NA	False	ATTAAA	-23	NA	24256334	24362412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_24256966_24346733_24346818_24354832_24354974_24361351
transcript_52058.nnic	chr16	+	1076	9	NNC	ENSG00000122257.20	novel	3384	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	51.644820650284	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	5	True	NA	28	True	AATAAA	-36	NA	24539551	24559805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_24539638_24540611_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_52059.nic	chr16	+	1184	9	NIC	ENSG00000122257.20	novel	6858	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	51.9613738752162	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	-9	True	NA	28	True	AATAAA	-36	NA	24539565	24559805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_24539760_24540611_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_52061.nnic	chr16	+	1288	9	NNC	ENSG00000122257.20	novel	6858	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	49.4341417949174	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	-9	True	NA	28	True	AATAAA	-36	NA	24539565	24559805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_24539864_24540611_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_52065.known	chr16	+	854	3	FSM	ENSG00000122257.20	ENST00000452655.6	854	3	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCCATTTTCACGTT	889	False	NA	14	True	AATAAA	-17	NA	24540495	24549401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_24540793_24546162_24546263_24548944
transcript_52066.known	chr16	+	3700	18	FSM	ENSG00000090905.19	ENST00000450465.6	3700	18	0	0	0	0	multi-exon	TRUE	canonical	3	148	junction_1	69.0182263676361	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTAGTTTCTTAGAG	NA	False	NA	NA	False	TTTAAA	-15	NA	24791486	24824786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_24791818_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
transcript_52072.known	chr16	+	454	3	FSM	ENSG00000090905.19	ENST00000566108.2	454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACGACAAGAAAAAGAAGGA	1	True	NA	NA	False	AAAAAG	-7	NA	24610208	24750777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_24610485_24640883_24641010_24750725
transcript_52074.known	chr16	+	8491	25	FSM	ENSG00000090905.19	ENST00000395799.8	8491	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	101.09297666285	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGTGGTTTGGAT	-5	True	NA	23	True	AATAAA	-16	NA	24729650	24826218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24804704_24804852_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
transcript_52075.nic	chr16	+	432	2	ISM	ENSG00000090905.19	ENST00000562829.1	277	3	-42	46519	20	-20269	5prime_fragment	FALSE	canonical	3	226	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCGCAAAGCAATTCT	15	False	NA	NA	False	TTTAAA	-10	NA	24729670	24730508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_24729847_24730252
transcript_52076.known	chr16	-	3495	20	FSM	ENSG00000140750.17	ENST00000289968.11	3495	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	122.104741378196	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATAATTCTTGGAGGTA	-21	True	NA	-6	True	ATTAAA	-25	NA	25015369	24919388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_52077.known	chr16	+	1032	1	FSM	ENSG00000262587.3	ENST00000619106.1	1032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGCGGTGTCATTAGAGT	4	True	NA	11	True	ATTAAA	-24	NA	25031743	25032775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25031700_25032800
transcript_52081.nic	chr16	-	645	3	FSM	ENSG00000260448.7	ENST00000566507.2	618	3	-29	2	-13	-2	multi-exon	FALSE	canonical	2	2	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTTTCAGCTTGTC	NA	False	NA	NA	False	AATAAA	-23	NA	25111568	25085591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_25085773_25103350_25103642_25111395
transcript_52082.known	chr16	-	432	3	FSM	ENSG00000260448.7	ENST00000563176.2	561	3	41	88	41	-88	multi-exon	FALSE	canonical	2	4	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGAGCAACAGAGGGA	66	False	NA	NA	False	NA	NA	NA	25111414	25100563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_25100686_25103350_25103642_25111395
transcript_52083.known	chr16	-	534	1	FSM	ENSG00000275494.1	ENST00000613406.1	534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	196	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGATTTGCTTAGTGAAT	18	True	NA	-1	True	AATAAA	-18	NA	25107102	25106568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_25106600_25107100
transcript_52084.known	chr16	-	389	2	ISM	ENSG00000260448.7	ENST00000566507.2	618	3	7981	2	7897	-2	3prime_fragment	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTTTCAGCTTGTC	7922	False	NA	NA	False	AATAAA	-23	NA	25103558	25085591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_25085773_25103350
transcript_52091.nic	chr16	+	1540	12	NIC	ENSG00000205629.12	novel	1529	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	291.248495189955	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	-23	True	NA	28	True	AATAAA	-16	NA	25111720	25178228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_25111997_25125963_25126127_25128474_25128571_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_52097.nic	chr16	+	1427	11	NIC	ENSG00000205629.12	novel	1352	11	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	247.678905036339	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	NA	False	NA	28	True	AATAAA	-16	NA	25111670	25178228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_521.known	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	3414	junction_3	8043.65104834241	8338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
transcript_52121.known	chr16	+	1168	9	FSM	ENSG00000205629.12	ENST00000564011.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	256.903161473346	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTGTTTAAATAAATCTCA	-9	True	NA	-2	True	NA	NA	NA	25111734	25178198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_52152.known	chr16	+	1352	11	FSM	ENSG00000205629.12	ENST00000399069.8	1352	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	247.678905036339	2486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	-2	True	NA	28	True	AATAAA	-16	NA	25111741	25178228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_52153.known	chr16	+	1529	12	FSM	ENSG00000205629.12	ENST00000380962.9	1529	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	291.248495189955	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	-13	True	NA	31	True	AATAAA	-19	NA	25111730	25178231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25111997_25125963_25126127_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_52160.nnic	chr16	+	609	3	Genic_Genomic	ENSG00000274925.1	novel	3115	1	NA	NA	407	266645	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGTGTCAAGGTTTCC	765	False	NA	NA	False	TTTAAA	-1	NA	25258358	25527711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr16_+_25258680_25329802_25329870_25527490
transcript_52165.nnic	chr16	-	456	2	NNC	ENSG00000236481.1	novel	294	2	NA	NA	-4573	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	51	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGATTTCTGAATTACTT	NA	False	NA	-5	True	AATAAA	-18	NA	26599386	26584758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_26584945_26599116
transcript_52166.known	chr16	+	2431	8	FSM	ENSG00000155666.12	ENST00000286096.9	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	7.02473763036814	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGTCTTGAACT	0	True	NA	13	True	AATAGA	-20	NA	27203525	27221768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_52169.nic	chr16	+	2381	7	NIC	ENSG00000155666.12	novel	2431	8	NA	NA	-34	-9	intron_retention	FALSE	canonical	1	1	junction_6	12.1712320201732	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATGTTGCCCAGGCTGG	4362	False	NA	4	True	AATAGA	-11	NA	27203473	27221759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220565
transcript_52176.known	chr16	-	1042	8	FSM	ENSG00000169189.17	ENST00000361439.9	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	5.01426536422407	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-18	True	NA	-4	True	AATAAA	-22	NA	27268772	27224993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_52177.known	chr16	-	1782	10	FSM	ENSG00000169189.17	ENST00000569236.5	1782	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	40.3350167998839	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCGTCTGTGTTCTCGAG	-10	True	NA	-5	True	AATAAA	-21	NA	27268764	27224994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27241352_27241890_27257434_27257582_27268162_27268375_27268705
transcript_52178.known	chr16	-	1853	7	FSM	ENSG00000169189.17	ENST00000565070.5	1853	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	5.12076383191241	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATAAACCATCCTGGG	13	True	NA	-35	True	NA	NA	NA	27268741	27225024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_27225237_27225725_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_52179.known	chr16	+	3624	11	FSM	ENSG00000077238.14	ENST00000395762.7	3624	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	13.9413055342748	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	40	True	NA	33	True	AATAAA	-18	NA	27313973	27364778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_52182.known	chr16	+	3539	10	FSM	ENSG00000077238.14	ENST00000543915.6	3539	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	15.1249936230983	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	-8	True	NA	33	True	AATAAA	-18	NA	27313925	27364778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27314021_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_52183.known	chr16	-	7015	37	FSM	ENSG00000077235.18	ENST00000561623.5	7015	37	0	0	0	0	multi-exon	TRUE	canonical	3	404	junction_29	76.2807719732798	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTGTGTGTTTCCT	-8	True	NA	-8	True	ATTAAA	-16	NA	27549913	27460612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_27461563_27462293_27462487_27463540_27463593_27464394_27464837_27465259_27465541_27469290_27469551_27470107_27470396_27471747_27471921_27476450_27476545_27478468_27478532_27481078_27481192_27483043_27483126_27484210_27484354_27485996_27486155_27488226_27488416_27488553_27488636_27489042_27489179_27489601_27489744_27492337_27492516_27492616_27492714_27493198_27493297_27494762_27494909_27495210_27495493_27497636_27497822_27498629_27498734_27501190_27501345_27502858_27502996_27505898_27506117_27506846_27507157_27508539_27508656_27511748_27511902_27528597_27528722_27533290_27533388_27537783_27537928_27538179_27538357_27545313_27545524_27549669
transcript_52195.nic	chr16	+	713	5	ISM	ENSG00000047578.14	ENST00000261588.10	6599	28	-42	148946	-31	144	5prime_fragment	FALSE	canonical	3	24	junction_1	8.25757228245687	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGGCAGCACGTA	224	False	NA	NA	False	AATAAA	-13	NA	27550101	27631398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064
transcript_52196.nic	chr16	+	875	5	ISM	ENSG00000047578.14	ENST00000261588.10	6599	28	-42	148784	-31	306	5prime_fragment	FALSE	canonical	3	24	junction_1	8.25757228245687	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCTATGGGGAGTAGGTG	224	False	NA	NA	False	NA	NA	NA	27550101	27631560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064
transcript_52198.known	chr16	+	6624	28	FSM	ENSG00000047578.14	ENST00000261588.10	6599	28	0	-25	0	25	multi-exon	TRUE	canonical	3	19	junction_6	8.67663244682428	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCGAGTCACCGGATTT	-1	True	NA	NA	False	AATAAA	-18	NA	27550143	27780369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064_27631163_27648603_27648736_27677728_27677997_27681398_27681531_27698327_27698501_27699533_27699600_27701588_27701696_27703895_27703999_27708704_27708921_27721557_27721696_27740040_27740921_27749583_27750307_27751718_27751925_27754172_27754252_27761412_27761591_27766308_27766475_27769860_27770019_27771587_27771653_27773098_27773210_27774944_27775085_27776927_27777030_27777609_27777771_27777880_27777970_27778573
transcript_522.known	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	7976.38286164572	7066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
transcript_52200.known	chr16	-	1173	6	FSM	ENSG00000169181.13	ENST00000380897.7	1173	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.09544511501033	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCGGTGTATGGAGG	NA	False	NA	-3	True	AATAAA	-17	NA	27888157	27790893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_27791468_27807486_27807555_27828788_27828957_27844949_27845062_27884485_27884639_27888059
transcript_52202.nnic	chr16	-	828	2	NNC	ENSG00000169181.13	novel	1173	6	NA	NA	79699	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCGGTGTATGGAGG	NA	False	NA	-3	True	AATAAA	-17	NA	27804871	27790893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_27791468_27804617
transcript_52209.known	chr16	-	2481	2	FSM	ENSG00000246465.1	ENST00000501520.1	2481	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGTAAATTCTTTC	-9	True	NA	NA	False	NA	NA	NA	28292064	28284884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28287068_28291766
transcript_52210.known	chr16	-	1329	7	FSM	ENSG00000198156.10	ENST00000533640.5	1329	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.98607881119482	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	NA	False	NA	NA	False	AAAAAG	-41	NA	28356654	28342554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28343189_28344547_28344584_28344692_28344754_28348833_28349030_28349141_28349242_28352878_28353062_28356535
transcript_52215.nic	chr16	-	436	2	ISM	ENSG00000198156.10	ENST00000533640.5	1329	7	-67	10257	-67	-10257	5prime_fragment	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTTCTGGACTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	28356721	28352811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_28353062_28356535
transcript_52218.known	chr16	-	2913	21	FSM	ENSG00000205609.13	ENST00000380876.5	2913	21	0	0	0	0	multi-exon	TRUE	canonical	3	2702	junction_12	503.475845994622	2567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-8	True	NA	NA	False	ACTAAA	-16	NA	28403841	28379714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
transcript_52229.nnic	chr16	-	688	3	Antisense	novelGene_ENSG00000261089.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTATGGTATTTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	28426451	28412780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_28412957_28414468_28414713_28426183
transcript_52237.known	chr16	-	1876	15	FSM	ENSG00000188603.22	ENST00000359984.12	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_10	33.9255637764654	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-12	True	NA	1	True	AATAAA	-27	NA	28492074	28477271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_52238.known	chr16	-	1720	14	FSM	ENSG00000188603.22	ENST00000357857.14	1720	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	56.0089806830991	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATATCGTTTTTGT	3565	False	NA	-7	True	AATAAA	-19	NA	28492005	28477279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_52240.known	chr16	-	1608	14	FSM	ENSG00000188603.22	ENST00000333496.14	1608	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	66.2831473400424	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGACTTCTTATATCGTT	3679	False	NA	-12	True	AATAAA	-14	NA	28491891	28477284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28489289_28489387_28491481_28491561_28491713
transcript_52241.known	chr16	-	1536	14	FSM	ENSG00000188603.22	ENST00000636172.1	1536	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	63.0762664130922	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	4	True	NA	NA	False	GGGGCT	-44	NA	28492058	28477515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_52242.known	chr16	-	1173	14	FSM	ENSG00000188603.22	ENST00000355477.10	1173	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	64.0437165781007	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	3811	False	NA	NA	False	GGGGCT	-44	NA	28491759	28477515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_52246.known	chr16	-	1318	14	FSM	ENSG00000188603.22	ENST00000565316.6	1318	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.4093166011146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACACCCAGGCCCACC	3811	False	NA	NA	False	NA	NA	NA	28491759	28477463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482607_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_52247.known	chr16	-	1957	14	FSM	ENSG00000188603.22	ENST00000561689.6	1957	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	35.0966543694551	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGGACTTCTTATAT	18	True	NA	-16	True	AATAAA	-10	NA	28492044	28477288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_52252.known	chr16	-	1577	13	FSM	ENSG00000188603.22	ENST00000637578.1	1577	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	78.8565416859417	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGGCCAGCCATTGTCTC	-3	True	NA	-88	True	NA	NA	NA	28492023	28477360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_52254.known	chr16	-	1224	13	FSM	ENSG00000188603.22	ENST00000636228.1	1224	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	78.8424941823183	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGGGCAGAGGGACAGG	3714	False	NA	NA	False	NA	NA	NA	28491856	28477482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_52255.known	chr16	-	1168	13	FSM	ENSG00000188603.22	ENST00000568422.6	1168	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	68.274517370848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATACTCGGGATCCTCA	3738	False	NA	NA	False	GGGGCT	-39	NA	28491832	28477520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_52264.known	chr16	-	1469	12	FSM	ENSG00000188603.22	ENST00000357806.11	1469	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	89.1220724717109	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	3587	False	NA	-18	True	AATAAA	-8	NA	28491983	28477290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_52270.known	chr16	-	931	11	FSM	ENSG00000188603.22	ENST00000566057.5	931	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	93.1087536164028	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	3811	False	NA	NA	False	GGGGCT	-44	NA	28491759	28477515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28487661_28487742_28491481_28491561_28491713
transcript_52271.known	chr16	-	1430	11	FSM	ENSG00000188603.22	ENST00000395653.9	1430	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	102.781564494806	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	-3	True	NA	-18	True	AATAAA	-8	NA	28492023	28477290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_52274.known	chr16	-	1183	10	FSM	ENSG00000188603.22	ENST00000628023.3	1183	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	77.606955269311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACAGGTCAGACACCCA	26	True	NA	NA	False	NA	NA	NA	28492036	28477471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28489289_28489387_28491481_28491561_28491713
transcript_52291.known	chr16	-	1685	16	FSM	ENSG00000188603.22	ENST00000636147.2	1685	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	49.2474928859892	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-12	True	NA	-6	True	AATAAA	-20	NA	28492074	28477278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_52292.known	chr16	-	1968	13	FSM	ENSG00000188603.22	ENST00000568076.6	1968	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_12	53.0714272362152	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATCCATGGACTTCT	-8	True	NA	-21	True	AATAAA	-5	NA	28492070	28477293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_52293.known	chr16	-	1753	17	FSM	ENSG00000188603.22	ENST00000637184.1	1753	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	79.6397160655411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAATGCCGATTTTAT	15	True	NA	-33	True	NA	NA	NA	28492047	28477305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28479643_28479766_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_523.known	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	14247	junction_1	3254.29027400753	7307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
transcript_52300.known	chr16	+	1159	10	FSM	ENSG00000176476.9	ENST00000317058.8	1159	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	9.44117590499911	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	-3	True	NA	22	True	ATTAAA	-16	NA	28553919	28591790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_52305.nic	chr16	+	1874	9	ISM	ENSG00000176476.9	ENST00000317058.8	1159	10	-61	0	-56	0	intron_retention	FALSE	canonical	3	110	junction_1	9.97183533758957	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	NA	False	NA	22	True	ATTAAA	-16	NA	28553858	28591790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772
transcript_52308.nic	chr16	+	1234	9	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	0	0	intron_retention	TRUE	canonical	3	110	junction_1	9.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	-8	True	NA	22	True	ATTAAA	-16	NA	28553914	28591790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590443_28590630_28590667_28590772_28590936_28591589
transcript_5231.nic	chr1	+	476	3	ISM	ENSG00000117859.19	ENST00000481937.5	630	7	-71	9619	-22	-1648	5prime_fragment	FALSE	canonical	3	321	junction_1	98	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGGTAACTTCCATAA	2630	False	NA	NA	False	NA	NA	NA	51729785	51746750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_51730125_51745535_51745632_51746709
transcript_52312.nnic	chr16	+	1073	9	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	42.0548377122062	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	-7	True	NA	22	True	ATTAAA	-16	NA	28553915	28591790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28554098_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_52313.known	chr16	-	1653	11	FSM	ENSG00000196502.13	ENST00000564818.5	1653	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	17.3161774072686	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATGATTGTGGGCCA	368	False	NA	15	True	AATAAA	-31	NA	28623252	28605586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609362_28609436_28609930_28610192_28620062_28620134_28623130
transcript_52315.known	chr16	-	1031	8	FSM	ENSG00000197165.11	ENST00000335715.9	1031	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.68534797531291	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTCTCTATTCCAAG	-1	True	NA	-3	True	AATAAA	-18	NA	28597050	28591942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28592141_28592262_28592444_28593251_28593347_28593441_28593569_28595366_28595465_28595549_28595676_28595782_28595935_28596996
transcript_52319.known	chr16	-	939	8	FSM	ENSG00000196502.13	ENST00000566189.5	939	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	15.2917211161425	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGGCAGGCTGCAGC	76	False	NA	NA	False	NA	NA	NA	28609990	28605864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608891_28609930
transcript_52324.nnic	chr16	-	898	6	NIC	ENSG00000197165.11	novel	1031	8	NA	NA	-89	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.71593044902064	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTCTCTATTCCAAG	NA	False	NA	-3	True	AATAAA	-18	NA	28597139	28591942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_28592141_28592262_28592444_28595366_28595465_28595549_28595676_28595782_28595935_28596996
transcript_52332.known	chr16	+	764	3	FSM	ENSG00000176476.9	ENST00000564682.5	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	15	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATGATGGAGAAAAGGTAA	-8	True	NA	NA	False	NA	NA	NA	28553914	28585403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28554098_28581054_28581145_28584912
transcript_52333.known	chr16	-	5291	3	FSM	ENSG00000176046.9	ENST00000324873.8	5291	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGTCAATTACTCCTC	-8	True	NA	NA	False	AATGAA	-21	NA	28538974	28532707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28537670_28538005_28538156_28538795
transcript_52335.nnic	chr16	-	554	3	NIC	ENSG00000197165.11	novel	1991	4	NA	NA	-83	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTCTCTATTCCAAG	NA	False	NA	-3	True	AATAAA	-18	NA	28597133	28591942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_28592141_28592262_28592482_28596996
transcript_52337.known	chr16	-	432	1	FSM	ENSG00000275441.1	ENST00000613454.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATTGCTGCTTGCTGG	49	False	NA	0	True	AATAAA	-28	NA	28554140	28553708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28553700_28554100
transcript_52338.known	chr16	+	1537	8	FSM	ENSG00000255524.8	ENST00000683297.1	1537	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.55658923167897	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTGTTTCAATATCTG	NA	False	NA	NA	False	AATAAA	-44	NA	28638064	28658744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28638151_28638322_28638481_28648134_28648318_28651956_28652057_28652168_28652365_28656462_28656524_28656632_28656669_28658027
transcript_5234.known	chr1	-	3895	33	FSM	ENSG00000078618.23	ENST00000354831.11	3895	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	306.10881790376	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-1	True	NA	-3	True	AATAAA	-45	NA	51878805	51789190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
transcript_52340.known	chr16	+	3128	21	FSM	ENSG00000184110.15	ENST00000566501.5	3128	21	0	0	0	0	multi-exon	TRUE	canonical	2	72	junction_1	892.055906319778	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGATTGCTTGTTGC	NA	False	NA	NA	False	ACTAAA	-18	NA	28688557	28735598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28688829_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_52346.known	chr16	+	2910	21	FSM	ENSG00000184110.15	ENST00000331666.11	2910	21	0	0	0	0	multi-exon	FALSE	canonical	3	3157	junction_1	369.781459107944	2656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-6	True	NA	NA	False	ACTAAA	-16	NA	28711463	28735596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_52351.known	chr16	+	3137	21	FSM	ENSG00000184110.15	ENST00000395587.5	3137	21	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	854.043469326942	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGCTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	28711416	28735727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28711568_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_52375.known	chr16	+	581	5	FSM	ENSG00000184110.15	ENST00000569690.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	1609.03859105368	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGATTTCGAGTCCCATA	-7	True	NA	NA	False	AATACA	-2	NA	28711462	28714409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28711568_28711656_28711788_28713700_28713767_28713908_28714099_28714320
transcript_52376.known	chr16	+	2986	20	FSM	ENSG00000184110.15	ENST00000566866.5	2986	20	0	0	0	0	multi-exon	FALSE	canonical	3	3269	junction_7	344.966857776206	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGATTGCTTGTTG	33	False	NA	NA	False	ACTAAA	-17	NA	28711526	28735597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_52377.known	chr16	+	424	3	FSM	ENSG00000184110.15	ENST00000566086.1	424	3	0	0	0	0	multi-exon	FALSE	canonical	3	4319	junction_1	124.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTTCTGGTTGATTG	NA	False	NA	NA	False	ACTAAA	-10	NA	28734918	28735590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28735020_28735172_28735336_28735430
transcript_52382.nnic	chr16	+	596	4	NNC	ENSG00000196993.8	novel	2037	7	NA	NA	-11117	-10307	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.09120616516523	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTTCTGGACTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	28740669	28762500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_28740769_28752193_28752283_28752434_28752593_28762250
transcript_52383.nnic	chr16	+	626	3	NNC	ENSG00000196993.8	novel	2037	7	NA	NA	6402	-10307	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTTCTGGACTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	28758188	28762500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_28758477_28758681_28758770_28762250
transcript_52384.known	chr16	+	1963	2	FSM	ENSG00000251417.2	ENST00000507031.2	1963	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTTTGTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	28802742	28817828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28803013_28816135
transcript_52389.known	chr16	+	1294	9	FSM	ENSG00000168488.19	ENST00000568266.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	167.006549272776	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCGTGGTATCAATGG	10	True	NA	NA	False	NA	NA	NA	28824137	28830768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614
transcript_52390.known	chr16	+	603	2	FSM	ENSG00000168488.19	ENST00000564284.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	2833	False	NA	NA	False	NA	NA	NA	28829777	28830936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28830059_28830614
transcript_52394.known	chr16	-	2011	10	FSM	ENSG00000178952.11	ENST00000313511.8	2011	10	0	0	0	0	multi-exon	TRUE	canonical	3	1397	junction_5	90.0634892659919	3223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTCTCAGTGAAGTT	14	False	28846362	-15	True	AATAAA	-16	NA	28846348	28842410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28843149_28843735_28843856_28843949_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845313_28845481_28845911_28846107_28846217
transcript_52395.known	chr16	-	814	3	FSM	ENSG00000178952.11	ENST00000569217.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	1649	junction_1	34	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGTTGGCCTGCCTGGCTG	2030	False	NA	-56	True	NA	NA	NA	28844332	28842837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28843149_28843735_28843856_28843949
transcript_52398.known	chr16	+	3033	10	FSM	ENSG00000178188.15	ENST00000359285.9	3033	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	37.1227526650718	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGTGATGGCTATGGCCA	6	True	NA	21	True	AATAAA	-22	NA	28863804	28874205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28863946_28866011_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872759_28873169_28873270_28873446
transcript_524.known	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	20083	junction_1	2545.79880500317	2969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
transcript_52404.known	chr16	+	6043	9	FSM	ENSG00000178188.15	ENST00000337120.9	6043	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	17.7372313228418	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	NA	False	NA	17	True	AATAAA	-18	NA	28862803	28874201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_52406.known	chr16	-	2307	13	FSM	ENSG00000177548.13	ENST00000358201.9	2307	13	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_4	10.6258986548067	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-31	True	NA	-3	True	AATAAA	-17	NA	28925238	28904420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
transcript_52414.known	chr16	-	558	2	FSM	ENSG00000260442.6	ENST00000561547.5	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	21	True	NA	-8	True	ATTAAA	-19	NA	28879895	28878956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28879108_28879488
transcript_52415.known	chr16	-	530	2	FSM	ENSG00000260442.6	ENST00000566956.2	546	2	16	0	16	0	multi-exon	FALSE	canonical	3	37	junction_1	0	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-4	True	NA	-8	True	ATTAAA	-19	NA	28879920	28878956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28879108_28879541
transcript_52418.nic	chr16	+	1756	8	NIC	ENSG00000176953.13	novel	4564	8	NA	NA	-12	391	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	89.4281150148097	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTTTCATGTGTGAATA	NA	False	NA	13	True	NA	NA	NA	28950975	28964670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28951052_28952131_28952205_28954564_28954683_28955977_28956059_28956150_28956338_28958716_28958862_28958990_28959101_28963704
transcript_52420.known	chr16	+	4569	8	FSM	ENSG00000176953.13	ENST00000320805.9	4564	8	0	-5	0	5	multi-exon	FALSE	canonical	3	233	junction_3	14.7786387487247	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTGGAGGATTTTTGT	NA	False	NA	17	True	AATAAA	-21	NA	28950936	28967097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28951399_28952131_28952205_28954564_28954683_28955977_28956059_28956150_28956338_28958716_28958862_28958990_28959101_28963704
transcript_52426.nic	chr16	+	650	3	ISM	ENSG00000176953.13	ENST00000320805.9	4564	8	360	12053	290	-1673	5prime_fragment	FALSE	canonical	3	244	junction_1	12.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCTGGCATGGT	298	False	NA	NA	False	AATAAA	-2	NA	28951296	28955039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_28951399_28952131_28952205_28954564
transcript_52429.nic	chr16	+	2143	13	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_1	175.634563796537	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	444	False	NA	10	True	AATAAA	-11	NA	28974753	28984540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_5243.known	chr1	-	3594	31	FSM	ENSG00000078618.23	ENST00000352171.12	3594	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	199.502773581388	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-1	True	NA	-22	True	AATAAA	-26	NA	51878727	51789209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_52432.nnic	chr16	+	1883	13	NIC	ENSG00000169682.18	novel	1979	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	184.527079464114	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-9	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28974864_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_52433.known	chr16	+	2102	13	FSM	ENSG00000169682.18	ENST00000323081.12	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	155.412957953962	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	12	True	NA	13	True	AATAAA	-14	NA	28974793	28984543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_52435.nic	chr16	+	1987	12	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_1	238.457335442729	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	444	False	NA	10	True	AATAAA	-11	NA	28974753	28984540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_52439.nic	chr16	+	1962	12	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	223.760165289195	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-7	True	NA	10	True	AATAAA	-11	NA	28974774	28984540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_52441.nic	chr16	+	1981	12	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	232.841378277179	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	-7	True	NA	10	True	AATAAA	-11	NA	28974774	28984540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28975101_28975187_28975393_28975491_28975558_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_52450.known	chr16	+	2443	4	FSM	ENSG00000213658.13	ENST00000564447.5	2443	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3.85861230093008	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGCGTCTGTGTGTGCC	1543	False	NA	12	True	AATAAA	-22	NA	28987565	28990454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28989590_28989773_28989840_28989932_28990020_28990188
transcript_52451.known	chr16	+	2205	12	FSM	ENSG00000169682.18	ENST00000311008.16	2205	12	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_6	74.0115023448304	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	-4	True	NA	13	True	AATAAA	-14	NA	28974777	28984543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_52455.nnic	chr16	-	714	2	NNC	ENSG00000260908.1	novel	351	3	NA	NA	96	1978	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTATAGGTGTCTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	29107615	29101678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_29102132_29107354
transcript_52456.known	chr16	-	1840	2	FSM	ENSG00000260908.1	ENST00000562618.1	1840	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	29107711	29103656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29105140_29107354
transcript_52457.known	chr16	-	2972	14	FSM	ENSG00000288632.1	ENST00000675579.1	2972	14	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_13	245.249950991919	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTGGAGATAG	8	True	NA	NA	False	NA	NA	NA	29613717	29442916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29551188_29551362_29553085_29553184_29554415_29554489_29554866_29554993_29558664_29558879_29560156_29560216_29561514_29561652_29565350_29565507_29566085_29566250_29569270_29569329_29613102
transcript_52460.known	chr16	+	1356	8	FSM	ENSG00000213648.11	ENST00000360423.12	1356	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	77.8357768848317	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATGTAGAGCCT	28	False	NA	11	True	AATAAA	-19	NA	29459912	29464966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29459986_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
transcript_52464.known	chr16	+	762	5	FSM	ENSG00000181625.17	ENST00000351581.4	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	401.850329724886	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	33	False	NA	NA	False	AATAAA	-14	NA	29454561	29458219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29454931_29455397_29455450_29457631_29457760_29457927_29458016_29458094
transcript_52469.known	chr16	-	1012	3	FSM	ENSG00000183336.9	ENST00000330978.4	399	3	-613	0	-613	0	multi-exon	FALSE	canonical	3	2413	junction_1	236.5	14504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	62	False	NA	NA	False	ATTAAA	-14	NA	29454964	29453592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29453733_29454015_29454114_29454190
transcript_52470.known	chr16	-	937	5	FSM	ENSG00000261740.7	ENST00000569622.6	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_3	984.792363902158	3648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTTGATAAGTTTTT	3	True	NA	NA	False	NA	NA	NA	29454347	29443229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29446923_29454015_29454114_29454190
transcript_52471.known	chr16	-	3103	6	FSM	ENSG00000261740.7	ENST00000565417.6	3103	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1057.88271561643	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTCTTTTTCCTTGA	-6	True	NA	NA	False	AATAAA	-35	NA	29454356	29443248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29450111_29450277_29452108_29454114_29454190
transcript_52472.known	chr16	+	1165	6	FSM	ENSG00000181625.17	ENST00000330181.9	1165	6	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_2	128.219499297104	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	-1	True	NA	NA	False	AATAAA	-14	NA	29454500	29458219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29454931_29455397_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29458094
transcript_52478.known	chr16	+	418	1	FSM	ENSG00000279228.2	ENST00000624430.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTTTCTTGTGCACTT	5724	False	NA	NA	False	AATAAA	-15	NA	29467160	29467578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29467200_29467600
transcript_52483.known	chr16	+	913	3	FSM	ENSG00000103485.19	ENST00000219771.7	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	349.5	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTTGAGACCAGCCTGG	NA	False	NA	NA	False	NA	NA	NA	29679007	29697776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29679211_29696995_29697128_29697198
transcript_52488.known	chr16	+	2200	4	FSM	ENSG00000103485.19	ENST00000395384.9	2200	4	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	49.8285950924656	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	20	True	NA	17	True	AATAAA	-17	NA	29679179	29698699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29679211_29694663_29695200_29696995_29697128_29697198
transcript_52493.known	chr16	+	2081	14	FSM	ENSG00000079616.14	ENST00000160827.9	2081	14	0	0	0	0	multi-exon	TRUE	canonical	3	1334	junction_8	89.840489810928	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	10	True	NA	25	True	AATACA	-15	NA	29790750	29805384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_52494.known	chr16	+	2493	14	FSM	ENSG00000079616.14	ENST00000400751.9	2493	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	408.196292263601	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	191	False	NA	25	True	AATACA	-15	NA	29790970	29805384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29791462_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_525.known	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	21087	junction_2	2414	2697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_10819_11031_11109_11205
transcript_52504.known	chr16	+	672	4	FSM	ENSG00000103495.15	ENST00000561855.1	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	458.281087931365	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGTCCCTTGGTACAA	115	False	NA	NA	False	NA	NA	NA	29806647	29810266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29806894_29808229_29808294_29808569_29808742_29810076
transcript_52509.known	chr16	+	2462	4	FSM	ENSG00000167371.21	ENST00000358758.12	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	38.3782345723313	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCCTCCAATCTCGGTTG	-3	True	NA	7	True	AATAAA	-17	NA	29812192	29815881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29812324_29812989_29813934_29814332_29814466_29814627
transcript_52512.known	chr16	+	1464	3	FSM	ENSG00000103495.15	ENST00000568544.5	1464	3	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_2	211.5	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCGGACCCCATTACAATA	240	False	NA	-26	True	NA	NA	NA	29808050	29811125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29808294_29808569_29808742_29810076
transcript_52514.known	chr16	+	1470	3	FSM	ENSG00000167371.21	ENST00000567659.3	1470	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	24	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCCCCCACCCCTAAG	-5	True	NA	NA	False	NA	NA	NA	29812190	29814725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29812324_29812989_29813934_29814332
transcript_52516.known	chr16	+	2540	5	FSM	ENSG00000103495.15	ENST00000322945.11	2540	5	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_4	186.508042722023	2954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCTGGATTGAAT	-4	True	NA	13	True	AATAAA	-18	NA	29806528	29811164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29810076
transcript_52517.known	chr16	+	1593	4	FSM	ENSG00000103495.15	ENST00000568282.1	1593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	479.55627638706	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACCCCATTACAATAAAT	8	True	NA	-23	True	NA	NA	NA	29808145	29811128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29808294_29808569_29808742_29809539_29809772_29810087
transcript_52518.known	chr16	+	3002	2	FSM	ENSG00000167371.21	ENST00000300797.7	3002	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTCCAATCTCGGTT	-21	True	NA	6	True	AATAAA	-16	NA	29812240	29815880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29812352_29812989
transcript_52519.known	chr16	+	2867	2	FSM	ENSG00000167371.21	ENST00000647876.1	2867	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTACAACGCGGTTCGGA	1442	False	NA	-30	True	NA	NA	NA	29812149	29815682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29812324_29812989
transcript_52520.known	chr16	+	3874	3	FSM	ENSG00000280789.2	ENST00000320330.8	3874	3	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_1	1	1688	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTGTGTCCTTGTT	5	True	NA	21	True	NA	NA	NA	29816151	29822489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29817008_29817209_29817293_29819554
transcript_52521.known	chr16	-	1843	6	FSM	ENSG00000103502.14	ENST00000219789.11	1843	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_4	11.2960169971544	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGAGTGTGG	-18	True	NA	-13	True	AATAAA	-18	NA	29863226	29858356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814
transcript_52522.known	chr16	-	1532	7	FSM	ENSG00000103502.14	ENST00000569956.5	1532	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	178.438286873143	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTAATAAATACTCGTCT	3	True	NA	-41	True	NA	NA	NA	29863205	29858384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814_29862866_29863127
transcript_52525.known	chr16	+	729	6	FSM	ENSG00000214725.9	ENST00000565014.5	729	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.78885438199983	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGTTTCTCTGGGG	NA	False	NA	NA	False	AATAAA	-21	NA	29863592	29868053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865355_29865443_29867863
transcript_52526.nnic	chr16	+	730	6	NNC	ENSG00000214725.9	novel	729	6	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.78885438199983	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTGTGGTTTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	29863548	29868048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865393_29865443_29867863
transcript_52527.known	chr16	+	757	6	FSM	ENSG00000214725.9	ENST00000398859.4	757	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.33238075793812	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTGTGGTTTCTC	-10	True	NA	NA	False	AATAAA	-16	NA	29863833	29868048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29864005_29864303_29864392_29864727_29864876_29865159_29865238_29865355_29865443_29867863
transcript_52528.nnic	chr16	+	681	5	NIC	ENSG00000214725.9	novel	729	6	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	1.92028643696715	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTGTGGTTTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	29863548	29868048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29867863
transcript_52535.nnic	chr16	+	533	4	NIC	ENSG00000214725.9	novel	729	6	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTGTGGTTTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	29863548	29868048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29863731_29864303_29864392_29865159_29865238_29867863
transcript_52536.known	chr16	-	3843	18	FSM	ENSG00000174938.15	ENST00000617533.5	3843	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_13	69.7347421021643	783	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	7	True	NA	-11	True	AATAAA	-21	NA	29899550	29871158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_5255.known	chr1	-	3819	31	NNC	ENSG00000078618.23	novel	3594	31	NA	NA	-132	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	259.682415012389	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTTGTTTGTATT	NA	False	NA	-8	True	AATAAA	-40	NA	51878937	51789195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792426_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_52554.nic	chr16	+	1245	6	NIC	ENSG00000174939.11	novel	1732	5	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	43.0627449194777	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	-17	True	NA	NA	False	AATAAA	-17	NA	29900359	29919864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787_29905960_29906078_29906128_29919530
transcript_52564.known	chr16	+	775	4	FSM	ENSG00000174939.11	ENST00000563177.5	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	28.8905982400273	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTTGAAGGAAGGTGC	-2	True	NA	NA	False	GGGGCT	-33	NA	29900374	29905887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787
transcript_52566.nnic	chr16	+	1024	4	NIC	ENSG00000174939.11	novel	1732	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	42.2453153221356	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	-17	True	NA	NA	False	AATAAA	-17	NA	29900359	29919864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900567_29901551_29901921_29904851_29904966_29919530
transcript_52567.known	chr16	+	1115	4	FSM	ENSG00000174939.11	ENST00000483405.5	1115	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.4630711207319	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	2	True	NA	10	True	TATAAA	-19	NA	29900378	29906056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29900742_29901551_29901921_29904851_29904966_29905787
transcript_52575.nnic	chr16	+	910	3	NIC	ENSG00000174939.11	novel	1732	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	15	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	-17	True	NA	NA	False	AATAAA	-17	NA	29900359	29919864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900567_29901551_29901921_29919530
transcript_52577.nnic	chr16	+	1085	3	NIC	ENSG00000174939.11	novel	1115	4	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	6.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	-17	True	NA	NA	False	AATAAA	-17	NA	29900359	29919864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900742_29901551_29901921_29919530
transcript_52581.known	chr16	+	1816	3	FSM	ENSG00000174939.11	ENST00000308748.10	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	13	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	-3	True	NA	10	True	TATAAA	-19	NA	29900487	29906056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29901921_29904851_29904966_29905787
transcript_52582.known	chr16	+	563	4	FSM	ENSG00000174939.11	ENST00000651383.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.7806883464712	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGCACTGAAATATAAATT	44	False	NA	-26	True	NA	NA	NA	29900881	29906020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29900921_29901743_29901921_29904851_29904966_29905787
transcript_52583.known	chr16	+	1732	5	FSM	ENSG00000174939.11	ENST00000566693.1	1732	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	47.9374592568275	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	20	False	NA	NA	False	AATAAA	-17	NA	29900857	29919864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29901921_29904851_29904966_29905787_29905960_29906078_29906128_29919530
transcript_52584.known	chr16	+	1013	7	FSM	ENSG00000149932.17	ENST00000570255.6	1013	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	423.442243208366	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	31	False	NA	14	True	AATAAA	-16	NA	29962110	29973048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
transcript_52589.known	chr16	+	946	6	FSM	ENSG00000149932.17	ENST00000279396.11	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	276.530938594581	5021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	-1	True	NA	14	True	AATAAA	-16	NA	29962078	29973048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_52596.known	chr16	+	1249	5	FSM	ENSG00000149932.17	ENST00000561899.6	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	304.19771531029	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGGTTTTACTTAT	24	True	NA	-10	True	NA	NA	NA	29962103	29972005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407
transcript_52599.known	chr16	+	721	5	FSM	ENSG00000149932.17	ENST00000575829.6	721	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	409.506410206238	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCCTTCTCTGCTGTG	7	True	NA	NA	False	NA	NA	NA	29962086	29971466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971410
transcript_526.known	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	555	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6001_+_0_6000
transcript_52611.known	chr16	+	4937	16	FSM	ENSG00000149930.18	ENST00000308893.9	4937	16	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	15.5283253729721	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTTTGGCCCAGGCT	2	True	NA	14	True	AATAAA	-15	NA	29973867	29988393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264
transcript_52616.known	chr16	-	2560	7	FSM	ENSG00000149929.16	ENST00000279392.8	2560	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	25.1490004219297	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTACTATTCAGTGGCCA	7	True	NA	-9	True	AATAAA	-20	NA	29995617	29992329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29993905_29994844_29995102_29995218_29995342_29995464_29995540
transcript_52618.known	chr16	-	988	6	FSM	ENSG00000149929.16	ENST00000564026.1	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	47.9249413145181	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCCCCATTCTCACC	-19	True	NA	-1	True	AATAAA	-27	NA	29995643	29992989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29995102_29995218_29995342_29995464_29995540
transcript_5263.nic	chr1	-	2881	11	ISM	ENSG00000078618.23	ENST00000352171.12	3594	31	-211	25983	-133	736	5prime_fragment	FALSE	canonical	3	830	junction_9	55.803673714192	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAAAAAAGG	NA	False	NA	NA	False	ATTAAA	-9	NA	51878938	51815192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_52634.known	chr16	-	1050	3	FSM	ENSG00000149927.18	ENST00000567824.1	1050	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGCTCCTAGGAAGAG	9629	False	NA	NA	False	NA	NA	NA	30021688	30012263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30012678_30013466_30013597_30021182
transcript_52636.known	chr16	+	1154	7	FSM	ENSG00000169592.15	ENST00000563197.6	1154	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_6	41.4192655120242	2165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	5	True	NA	27	True	ATTAAA	-15	NA	29996240	30005791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005220
transcript_52637.known	chr16	+	625	6	FSM	ENSG00000169592.15	ENST00000567254.5	625	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	34.424409944108	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCACCTGAGGGAGGCT	8	True	NA	NA	False	NA	NA	NA	29996243	30001575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413
transcript_52638.known	chr16	+	1412	8	FSM	ENSG00000169592.15	ENST00000562441.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	106.813589290609	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCTGTATTAAAGGAGT	10	True	NA	-2	True	TTTAAA	-35	NA	29996245	30005762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30004567_30004658_30005220
transcript_52639.known	chr16	+	4469	7	FSM	ENSG00000169592.15	ENST00000569957.5	4469	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	104.056741999524	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGTGGCTCTGGGTTT	2	True	NA	10	True	AATGAA	-12	NA	29996237	30005774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30004658_30005220
transcript_52640.known	chr16	-	2065	12	FSM	ENSG00000149927.18	ENST00000616445.4	2065	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	15.9451539310318	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGGACTCGTGTGTGCT	1	True	NA	-7	True	AATAAA	-12	NA	30011421	30005515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010236_30010902_30010990_30011329
transcript_52642.known	chr16	+	2323	14	FSM	ENSG00000285043.3	ENST00000338110.11	2323	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	3406.02539887058	13267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	-21	True	NA	22	True	AATAAA	-18	NA	30053150	30070414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30053218_30053463_30053500_30054783_30054928_30055171_30055328_30063728_30064249_30064423_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_52647.known	chr16	+	1603	9	FSM	ENSG00000149925.22	ENST00000412304.6	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	2362.91697047844	6830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGGCCGTCCGTGTCT	27	False	NA	19	True	AATAAA	-15	NA	30064496	30070411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30064785_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_52658.known	chr16	+	1550	9	FSM	ENSG00000149925.22	ENST00000563060.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	1337	junction_1	1942.36762338518	11459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	62	False	NA	22	True	AATAAA	-18	NA	30064273	30070414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_52659.known	chr16	+	1640	10	FSM	ENSG00000149925.22	ENST00000642816.3	1640	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	2977.48801658191	9505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	-2	True	NA	22	True	AATAAA	-18	NA	30065759	30070414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30065928_30066884_30067039_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_52660.known	chr16	+	1499	8	FSM	ENSG00000149925.22	ENST00000569798.5	1499	8	0	0	0	0	multi-exon	FALSE	canonical	3	5055	junction_1	763.446962994891	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATGCTAAGTCCATCAC	10	False	NA	-40	True	NA	NA	NA	30065771	30070352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829
transcript_52661.known	chr16	+	1447	9	FSM	ENSG00000149925.22	ENST00000395240.7	1447	9	0	0	0	0	multi-exon	TRUE	canonical	2	289	junction_5	2311.14753693917	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	15	False	NA	-12	True	NA	NA	NA	30065776	30070380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068991_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_52662.known	chr16	+	801	4	FSM	ENSG00000149925.22	ENST00000566130.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	6801	junction_2	265.870060158885	2414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	355	False	NA	22	True	AATAAA	-18	NA	30069261	30070414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30069390_30069498_30069674_30069829_30070030_30070116
transcript_52668.known	chr16	+	1402	9	FSM	ENSG00000149923.14	ENST00000279387.12	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	2228	junction_1	343.816970748973	4358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	-10	True	NA	10	True	AATAAA	-15	NA	30075993	30085376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_52672.nic	chr16	+	1428	9	NIC	ENSG00000149923.14	novel	1402	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	616	junction_1	851.396637516851	4276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	-30	True	NA	10	True	AATAAA	-15	NA	30075973	30085376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_30076101_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_52680.known	chr16	+	1447	8	FSM	ENSG00000149923.14	ENST00000563200.5	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	2228	junction_1	367.517540883619	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTCTAATAAAAGAAG	3	True	NA	-19	True	GATAAA	-21	NA	30076006	30085347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083782_30084665_30084856_30084932
transcript_52682.known	chr16	+	941	8	FSM	ENSG00000149923.14	ENST00000562664.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	922.03740682894	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCGACTACTTCCTGTG	14	True	NA	NA	False	NA	NA	NA	30076017	30085041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_52684.known	chr16	+	1301	8	FSM	ENSG00000149923.14	ENST00000627746.2	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1035.68969428934	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAGAAAAATGGT	19	True	NA	-10	True	GATAAA	-30	NA	30076022	30085356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_52695.known	chr16	+	846	7	FSM	ENSG00000149923.14	ENST00000563732.5	846	7	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_2	1099.80250752376	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGGAAGGTTACAAG	-26	True	NA	NA	False	NA	NA	NA	30075977	30084779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665
transcript_52697.known	chr16	+	742	7	FSM	ENSG00000149923.14	ENST00000562222.5	742	7	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	1219.8985841272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTGGTGATGGAAGGT	28	True	NA	NA	False	NA	NA	NA	30076031	30084773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076101_30076314_30076476_30081258_30081311_30082483_30082535_30083393_30083568_30083654_30083782_30084665
transcript_527.known	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6002_+_0_6000
transcript_52704.known	chr16	+	1333	8	FSM	ENSG00000149923.14	ENST00000561610.1	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_4	174.856559289409	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGATAAAAATTTTGAGAA	221	False	NA	-48	True	NA	NA	NA	30076224	30085318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_52706.known	chr16	-	1843	9	FSM	ENSG00000149922.12	ENST00000395224.7	1843	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	5.93717104351896	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGGCTCCTGTGTTTGG	4337	False	NA	0	True	AATAAA	-28	NA	30091924	30085792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075_30091242_30091872
transcript_52707.known	chr16	-	1796	8	FSM	ENSG00000149922.12	ENST00000279386.6	1796	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	1.88441513689613	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGGGCTCCTGTGTT	5012	False	NA	-3	True	AATAAA	-25	NA	30091249	30085795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075
transcript_52719.known	chr16	-	371	5	FSM	ENSG00000090238.12	ENST00000568674.1	371	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	125.473851857668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGTACAAAGAGGGGAAG	13	True	NA	NA	False	NA	NA	NA	30096208	30092777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095336_30096096
transcript_52722.known	chr16	-	796	5	FSM	ENSG00000090238.12	ENST00000566595.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	147.550838696363	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGCTCTGGACCCTC	NA	False	NA	NA	False	NA	NA	NA	30096912	30092636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096615
transcript_52723.known	chr16	-	730	5	FSM	ENSG00000090238.12	ENST00000563788.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	147.117937383584	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCATGCACTGTGA	NA	False	NA	NA	False	NA	NA	NA	30096915	30092576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096744
transcript_52730.nnic	chr16	+	1348	2	FSM	ENSG00000250616.3	ENST00000693600.1	718	2	-630	0	15	0	multi-exon	FALSE	canonical	3	187	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	NA	False	NA	30	True	AGTAAA	-18	NA	30096444	30104116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30097420_30103743
transcript_52732.known	chr16	+	1650	2	FSM	ENSG00000250616.3	ENST00000515455.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	0	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	NA	False	NA	30	True	AGTAAA	-18	NA	30096429	30104116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30097420_30103456
transcript_52733.known	chr16	-	669	3	FSM	ENSG00000090238.12	ENST00000570099.5	669	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGCTCGCGTGTAATC	1381	False	NA	-35	True	AATAAA	-18	NA	30094880	30092313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30092800_30094384_30094476_30094788
transcript_52734.known	chr16	-	1078	10	FSM	ENSG00000102886.15	ENST00000406256.8	1078	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.05409255338946	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTTGTGCTGAGGGTGA	0	True	NA	1	True	AATAAA	-18	NA	30113537	30104809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30105010_30108212_30108265_30108372_30108433_30111387_30111522_30112131_30112222_30112305_30112425_30112522_30112569_30112657_30112794_30113021_30113065_30113339
transcript_52737.nic	chr16	-	1690	9	NIC	ENSG00000102882.12	novel	1787	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	115.647024929308	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	225	False	NA	-5	True	TATAAA	-24	NA	30123010	30114104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30122926
transcript_52738.known	chr16	-	1787	9	FSM	ENSG00000102882.12	ENST00000263025.9	1787	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	31.6336450634447	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	15	True	NA	-5	True	TATAAA	-24	NA	30123220	30114104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_52739.known	chr16	-	2567	8	FSM	ENSG00000102882.12	ENST00000484663.5	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	33.3582899772168	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	-1	True	NA	-6	True	TATAAA	-23	NA	30122968	30114105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823
transcript_52742.known	chr16	+	1623	11	FSM	ENSG00000102879.16	ENST00000219150.10	1623	11	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_7	10.9178752511649	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAGACTCTGATGACT	-13	True	NA	NA	False	AATAAA	-20	NA	30183601	30189076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30183726_30185208_30185408_30186597_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_52747.known	chr16	+	1355	8	FSM	ENSG00000261052.6	ENST00000338971.10	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	78.0418516710419	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	0	True	NA	7	True	AATAAA	-18	NA	30199254	30204310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30199328_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_52749.known	chr16	+	762	5	FSM	ENSG00000132207.18	ENST00000345535.8	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	399.835903840563	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	11	False	NA	NA	False	AATAAA	-14	NA	30193903	30197561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30194273_30194739_30194792_30196973_30197102_30197269_30197358_30197436
transcript_5275.known	chr1	-	1020	2	FSM	ENSG00000078618.23	ENST00000491410.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	920	junction_1	0	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTATATCTCTCAGAGG	33	False	NA	NA	False	TATAAA	-41	NA	51878771	51839991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51840515_51878274
transcript_52757.known	chr16	-	335	3	FSM	ENSG00000169627.9	ENST00000569282.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	1140.5	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	0	True	NA	NA	False	ATTAAA	-15	NA	30193666	30192933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30193075_30193357_30193418_30193532
transcript_52760.known	chr16	-	1012	3	FSM	ENSG00000169627.9	ENST00000305321.4	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_1	122	13951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	62	False	NA	NA	False	ATTAAA	-14	NA	30194306	30192934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30193075_30193357_30193456_30193532
transcript_52761.known	chr16	-	307	2	FSM	ENSG00000169627.9	ENST00000565525.1	307	2	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	844	False	NA	NA	False	ATTAAA	-14	NA	30193524	30192934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30193075_30193357
transcript_52762.known	chr16	-	687	2	FSM	ENSG00000169627.9	ENST00000567436.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	2651	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	-5	True	NA	NA	False	ATTAAA	-15	NA	30193697	30192933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30193456_30193532
transcript_52763.known	chr16	+	1133	6	FSM	ENSG00000132207.18	ENST00000251303.11	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_2	122.025571090653	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	4	False	NA	NA	False	AATAAA	-14	NA	30193874	30197561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30194273_30194739_30194792_30194885_30195228_30196973_30197102_30197269_30197358_30197436
transcript_52764.known	chr16	+	2380	9	FSM	ENSG00000213599.10	ENST00000566712.2	2380	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	287.62038240535	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGGCTCATGTCTGCAA	1878	False	NA	NA	False	AATAAA	-21	NA	30195789	30204008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30197102_30197269_30197358_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_52770.known	chr16	+	418	1	FSM	ENSG00000278887.2	ENST00000624024.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTTTCTTGTGCACTT	5731	False	NA	NA	False	AATAAA	-15	NA	30206509	30206927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30206500_30206900
transcript_52776.known	chr16	-	3361	7	FSM	ENSG00000169217.9	ENST00000305596.8	3361	7	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_6	36.052816194516	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-34	True	NA	-8	True	AATAAA	-17	NA	30355308	30350772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
transcript_52779.known	chr16	-	1417	6	FSM	ENSG00000169217.9	ENST00000569466.1	1417	6	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_2	30.5195019618604	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTTGGCTGTGCTG	425	False	NA	-33	True	AATAAA	-17	NA	30354934	30352846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603
transcript_52781.known	chr16	+	992	2	FSM	ENSG00000260219.3	ENST00000563252.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACAACAGCAGGTTCTTT	774	False	NA	NA	False	AAAACA	-7	NA	30355440	30357104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30355621_30356292
transcript_52782.nnic	chr16	+	934	2	NIC	ENSG00000260219.3	novel	992	2	NA	NA	-19	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTACAACAGCAGGTT	755	False	NA	NA	False	AAAACA	-3	NA	30355421	30357100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_30355621_30356365
transcript_52783.nnic	chr16	+	850	2	FSM	ENSG00000260219.3	ENST00000688695.1	853	2	-13	16	-11	-4	multi-exon	FALSE	canonical	3	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTACAACAGCAGGTT	1218	False	NA	NA	False	AAAACA	-3	NA	30355884	30357100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30356000_30356365
transcript_52784.known	chr16	+	657	7	FSM	ENSG00000180209.12	ENST00000322861.12	657	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.34846922834953	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	0	True	NA	18	True	AATAAA	-24	NA	30374801	30377991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30374861_30375819_30375913_30376144_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_52785.nic	chr16	+	764	6	ISM	ENSG00000180209.12	ENST00000322861.12	657	7	852	0	-166	0	3prime_fragment	FALSE	canonical	3	10	junction_1	4.92341345003647	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	840	False	NA	18	True	AATAAA	-24	NA	30375653	30377991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_30375913_30376144_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_52786.nic	chr16	+	729	5	ISM	ENSG00000180209.12	ENST00000322861.12	657	7	1119	0	101	0	3prime_fragment	FALSE	canonical	3	12	junction_3	4.52769256906871	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	66	False	NA	18	True	AATAAA	-24	NA	30375920	30377991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_52787.nnic	chr16	+	511	3	NNC	ENSG00000180209.12	novel	336	2	NA	NA	-395	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	1006	False	NA	18	True	AATAAA	-24	NA	30377167	30377991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_30377434_30377653_30377703_30377795
transcript_52788.known	chr16	+	336	2	FSM	ENSG00000180209.12	ENST00000563728.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	1401	False	NA	18	True	AATAAA	-24	NA	30377562	30377991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30377703_30377795
transcript_52789.known	chr16	+	3234	2	FSM	ENSG00000180035.13	ENST00000320159.2	3234	2	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	0	1281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGCGGCTTTCTAGCTCC	-31	True	NA	27	True	AATAAA	-18	NA	30395418	30400108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30395874_30397329
transcript_52793.nic	chr16	+	851	3	NIC	ENSG00000179965.12	novel	2069	3	NA	NA	-24	-405	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	37.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAGACTGGAAAATGTG	1	True	NA	28	True	AATAAA	-20	NA	30407581	30414204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_30407665_30408044_30408195_30413586
transcript_52799.known	chr16	-	878	3	FSM	ENSG00000179958.10	ENST00000568973.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	568	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACCAGGGGTGCCTCTGA	210	False	NA	48	True	NA	NA	NA	30429800	30423978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424534_30429056_30429168_30429588
transcript_528.known	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6003_+_0_6000
transcript_5280.known	chr1	-	3149	31	FSM	ENSG00000078618.23	ENST00000485608.5	3149	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	288.942985533286	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTGTATTTTAAAA	24	True	NA	-24	True	AATAAA	-24	NA	51840454	51789211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51840225
transcript_52800.known	chr16	-	1024	3	FSM	ENSG00000179958.10	ENST00000678016.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	565	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCGTGAGGTTTCAAT	186	False	NA	-17	True	AATAAA	-20	NA	30429824	30423697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424534_30429056_30429168_30429747
transcript_52801.known	chr16	-	749	3	FSM	ENSG00000179958.10	ENST00000565758.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	569	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTATTCCTGGATGGC	18	True	NA	-7	True	AGTAAA	-21	NA	30429992	30424033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424534_30429056_30429168_30429854
transcript_52802.known	chr16	+	1187	2	FSM	ENSG00000179965.12	ENST00000564550.1	1187	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTCTTGGTCACTAATT	416	False	NA	NA	False	TTTAAA	-5	NA	30408030	30414609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30408195_30413586
transcript_52803.known	chr16	-	1181	3	FSM	ENSG00000179958.10	ENST00000319285.5	1181	3	0	0	0	0	multi-exon	FALSE	canonical	3	1112	junction_2	13	2963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTGTTATTACCTGTTT	-20	True	NA	-3	True	AGTAAA	-22	NA	30430030	30423614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424534_30429056_30429168_30429879
transcript_52804.known	chr16	-	2244	1	FSM	ENSG00000179918.19	ENST00000478753.5	2244	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTAATGTTTGGTGG	-1	True	NA	-1	True	AATAAA	-26	NA	30445874	30443630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30443600_30445900
transcript_52807.known	chr16	-	1511	3	FSM	ENSG00000169955.8	ENST00000568028.1	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCTTTGCTGAGGCAG	6169	False	NA	NA	False	NA	NA	NA	30535004	30532305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30533149_30534196_30534311_30534450
transcript_52811.known	chr16	-	2289	2	FSM	ENSG00000169957.10	ENST00000380412.7	2289	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	1334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGACTTGTCCTTAAAATG	-3	True	NA	-20	True	AATAAA	-17	NA	30526566	30524003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30526052_30526325
transcript_52812.known	chr16	+	1153	2	FSM	ENSG00000235560.4	ENST00000664247.1	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCTTCCACTTCATTG	-15	True	NA	NA	False	GATAAA	-21	NA	30535048	30537149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30535481_30536428
transcript_52814.known	chr16	-	2846	3	FSM	ENSG00000169951.10	ENST00000395091.3	2846	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	4	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGCTTGTATTGCAT	4	True	NA	-32	True	AGTAAA	-17	NA	30558374	30553763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30556108_30557732_30557847_30557986
transcript_52815.known	chr16	-	2738	3	FSM	ENSG00000169951.10	ENST00000252797.6	2738	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	10	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGCTTGTATTGCAT	239	False	NA	-32	True	AGTAAA	-17	NA	30558263	30553763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30556111_30557732_30557847_30557986
transcript_52817.nic	chr16	-	630	2	ISM	ENSG00000169951.10	ENST00000395091.3	2846	3	-128	3969	-128	-2095	5prime_fragment	FALSE	canonical	3	25	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTATCGGGTGCTCAG	0	True	NA	NA	False	NA	NA	NA	30558502	30557732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_30557847_30557986
transcript_52820.known	chr16	-	1106	3	FSM	ENSG00000229809.9	ENST00000223459.11	1106	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTTTTGTTTA	5	True	NA	-11	True	AATAGA	-17	NA	30571714	30569725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30570437_30571009_30571124_30571433
transcript_52821.known	chr16	-	1492	3	FSM	ENSG00000229809.9	ENST00000563276.5	1492	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGACCCTGGACTCAT	NA	False	NA	43	True	AAAAAG	-5	NA	30572734	30569671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30570437_30571009_30571124_30572121
transcript_52824.known	chr16	-	540	3	FSM	ENSG00000229809.9	ENST00000567855.1	540	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATAATAGCCCCTG	745	False	NA	NA	False	AATAAA	-29	NA	30571652	30570733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30570941_30571009_30571124_30571433
transcript_52825.known	chr16	+	1488	2	FSM	ENSG00000239791.2	ENST00000492040.1	1488	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCGTGGTGGCCCAT	12	False	NA	NA	False	AATAAA	-13	NA	30572254	30583860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30572412_30582529
transcript_52829.known	chr16	+	2078	12	FSM	ENSG00000156858.12	ENST00000300835.9	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	15.9570705072565	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	-22	True	NA	28	True	AGTAAA	-20	NA	30650959	30656413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_5283.nnic	chr1	-	941	6	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	-20	-9467	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	102.075658214875	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTCCACTTTTGAGT	-7	True	NA	NA	False	ATTAAA	-21	NA	51990720	51917422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_51917536_51919927_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_52832.known	chr16	+	2124	11	FSM	ENSG00000156858.12	ENST00000287463.8	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	16.7320052593824	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	3	True	NA	28	True	AGTAAA	-20	NA	30650984	30656413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_52835.known	chr16	+	5309	20	FSM	ENSG00000103549.22	ENST00000324685.11	5309	20	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	25.1539305399106	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	-1	True	NA	17	True	AATAAA	-18	NA	30762321	30776307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_52841.known	chr16	+	1536	10	FSM	ENSG00000156873.16	ENST00000328273.11	1536	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	72.1202699199978	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	25	True	NA	-12	True	NA	NA	NA	30748439	30757331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756354_30756521_30756589_30756716_30756803
transcript_52849.known	chr16	+	1791	9	FSM	ENSG00000156873.16	ENST00000563913.5	1791	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	27.7297223210042	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAATCTGCTACAC	28	True	NA	-9	True	NA	NA	NA	30748442	30757334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_5285.known	chr1	-	12780	5	FSM	ENSG00000169213.7	ENST00000371655.4	12780	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	14.0423466699836	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	13	True	NA	-10	True	ATTAAA	-17	NA	51990700	51907955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_52853.known	chr16	+	1618	7	FSM	ENSG00000156873.16	ENST00000564838.5	1618	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	93.555687516402	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCCTGTGTCTGTCT	-13	True	NA	22	True	AATAAA	-23	NA	30748401	30757365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756589_30756716_30756803
transcript_52858.known	chr16	+	1649	3	FSM	ENSG00000281991.2	ENST00000615541.3	1649	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	7.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTAGTTTTCATTGCT	-8	True	NA	NA	False	NA	NA	NA	30740641	30745196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30740708_30741740_30741909_30743781
transcript_5286.nic	chr1	-	902	4	ISM	ENSG00000169213.7	ENST00000371655.4	12780	5	-20	25101	-20	-25101	5prime_fragment	FALSE	canonical	3	243	junction_3	11.4309521329882	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTTTACCAGTTC	-7	True	NA	NA	False	AATAAA	-16	NA	51990720	51933056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_51933443_51937293_51937413_51976889_51977118_51990551
transcript_52861.known	chr16	-	1142	2	FSM	ENSG00000261840.4	ENST00000568500.1	1142	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACACTACTTGGTGCCTT	-1	True	NA	-9	True	AATAAA	-17	NA	30699058	30697712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30697932_30698135
transcript_52862.known	chr16	-	306	2	FSM	ENSG00000261840.4	ENST00000564775.3	348	2	41	1	41	-1	multi-exon	FALSE	canonical	3	9	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGGTGCCTTGATTAT	96	False	NA	-3	True	AATAAA	-23	NA	30698961	30697706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30697932_30698880
transcript_52863.known	chr16	-	496	2	FSM	ENSG00000196118.12	ENST00000537986.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCCCTGCACCCTGCTG	1663	False	NA	-17	True	AATAAA	-19	NA	30760559	30757434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30757655_30760283
transcript_52864.known	chr16	-	6083	3	FSM	ENSG00000102870.6	ENST00000262525.6	6083	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTGTTTCTTGTTTTTT	-13	True	NA	-7	True	AATAAA	-15	NA	30787205	30778455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30784255_30784409_30784516_30787027
transcript_52865.known	chr16	-	1603	6	FSM	ENSG00000099385.12	ENST00000572628.5	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	331.652468707833	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGAACGAATTGGGCTAT	3127	False	NA	NA	False	NA	NA	NA	30893942	30851245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30852323_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_52868.known	chr16	-	857	6	FSM	ENSG00000099385.12	ENST00000215115.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	47.50999894759	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCATGTCATTTCC	-29	True	NA	-2	True	AATAAA	-14	NA	30894077	30887794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30887991_30888859_30888946_30892585_30892748_30892839_30892949_30893211_30893291_30893852
transcript_52874.known	chr16	+	648	3	FSM	ENSG00000260083.3	ENST00000564901.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTGGGAGGGGACGAGG	14	True	NA	NA	False	NA	NA	NA	30875460	30895080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30875487_30876029_30876119_30894547
transcript_52877.known	chr16	+	1375	2	FSM	ENSG00000260083.3	ENST00000663816.1	1375	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAAATGAGTGTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	30875407	30895211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30876119_30894547
transcript_52878.known	chr16	+	1284	2	FSM	ENSG00000260083.3	ENST00000662645.2	1361	2	77	0	77	0	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	10	True	NA	16	True	AATAAA	-22	NA	30875538	30895220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30876119_30894516
transcript_52879.known	chr16	+	925	1	FSM	ENSG00000260083.3	ENST00000658747.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	5399	False	NA	16	True	AATAAA	-22	NA	30894295	30895220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30894300_30895200
transcript_52880.known	chr16	-	561	2	FSM	ENSG00000262721.1	ENST00000572471.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACCTTTATATTTTGGAA	1853	False	NA	NA	False	AGTAAA	-6	NA	30895216	30875765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30876034_30894923
transcript_52883.known	chr16	+	628	2	FSM	ENSG00000175938.7	ENST00000562699.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCCTTCCACCTTTTC	61	False	NA	NA	False	NA	NA	NA	30949151	30956461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30949518_30956199
transcript_52885.known	chr16	-	328	1	FSM	ENSG00000275263.1	ENST00000614997.1	328	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGACTGGACTGGTGTG	NA	False	NA	-6	True	AATAAA	-15	NA	30957199	30956871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30956900_30957200
transcript_52886.known	chr16	+	5934	19	FSM	ENSG00000099381.19	ENST00000684162.1	5934	19	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	7.92324288266981	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTGGTCGGTGTATTTG	-2	True	NA	16	True	ATTAAA	-16	NA	30957970	30984664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30958125_30958716_30958882_30959090_30959187_30961266_30961538_30963432_30963555_30964093_30964324_30964611_30965462_30965600_30966387_30966883_30967061_30967500_30967589_30969304_30969463_30969601_30969690_30971377_30971720_30979144_30980195_30980484_30980658_30980738_30980850_30981060_30981181_30983634_30983773_30983849
transcript_52887.known	chr16	+	2171	7	FSM	ENSG00000099377.14	ENST00000297679.10	2171	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.57436097443867	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	-3	True	NA	23	True	ATTAAA	-15	NA	30985206	30989147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30985298_30985652_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_52888.nnic	chr16	+	2354	7	NNC	ENSG00000099377.14	novel	2171	7	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14.5114897006935	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	-17	True	NA	23	True	ATTAAA	-15	NA	30985192	30989147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_30985298_30985483_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_52892.known	chr16	-	4674	10	FSM	ENSG00000099365.11	ENST00000215095.11	4674	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.73755680118397	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCGTGTGCTCACTTCC	23	True	NA	-1	True	NA	NA	NA	31010638	30989255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30992902_30993129_30993241_30993346_30993485_30996682_30996757_30996950_30997060_30997501_30997576_31000927_31001003_31001093_31001194_31001528_31001604_31010366
transcript_52897.known	chr16	+	1410	11	FSM	ENSG00000103496.15	ENST00000313843.8	1410	11	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	16.9422548676379	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCCTGTGCACGTGTG	-5	True	NA	9	True	ATTAAA	-19	NA	31033557	31040164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_52898.known	chr16	+	1002	3	FSM	ENSG00000103496.15	ENST00000461455.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	20.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	25	True	NA	6	True	AATAAA	-18	NA	31033587	31034877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31033836_31034012_31034115_31034225
transcript_52899.known	chr16	+	846	4	FSM	ENSG00000103496.15	ENST00000565483.1	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	97.3801257387199	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTACTTTCTCCT	43	True	NA	-18	True	NA	NA	NA	31033605	31034853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461
transcript_529.known	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1781.10201841444	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
transcript_52900.known	chr16	+	649	4	FSM	ENSG00000103496.15	ENST00000613541.1	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_3	26.4701089281224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	16	False	NA	6	True	AATAAA	-18	NA	31033804	31034877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461
transcript_52901.known	chr16	-	2685	3	FSM	ENSG00000167394.13	ENST00000300849.5	2685	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	4.5	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATCTTCTGTGTTCTGG	-16	True	NA	-5	True	ATTAAA	-19	NA	31074240	31060846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31062281_31063812_31064482_31073658
transcript_52909.known	chr16	-	664	3	FSM	ENSG00000167397.15	ENST00000394971.7	664	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	398.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCTTTGGCATGTGA	1448	False	NA	NA	False	NA	NA	NA	31094549	31091103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31093311_31093422_31094234
transcript_5291.known	chr1	-	1708	1	FSM	ENSG00000198841.4	ENST00000371614.2	1708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATCTCTTTCACTTAA	-11	True	NA	-4	True	AATAAA	-19	NA	52033810	52032102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52032100_52033800
transcript_52911.known	chr16	-	870	3	FSM	ENSG00000167397.15	ENST00000498155.1	870	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	398.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTCCAAGAACCCCAG	17	False	NA	NA	False	NA	NA	NA	31095980	31091174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31093311_31093422_31095388
transcript_52913.known	chr16	-	876	3	FSM	ENSG00000167397.15	ENST00000300851.10	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	391	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	5	True	NA	-1	True	AATAAA	-30	NA	31094760	31090841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31093311_31093483_31094556
transcript_52914.known	chr16	+	582	2	FSM	ENSG00000167395.10	ENST00000564189.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTACCGTCACCCCGGGA	-5	True	NA	NA	False	NA	NA	NA	31074422	31076488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31074762_31076245
transcript_52915.known	chr16	+	6892	3	FSM	ENSG00000167395.10	ENST00000300850.5	6892	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCCAGTCCTCATAGGCA	-6	True	NA	NA	False	NA	NA	NA	31074421	31084196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31074632_31076245_31081702_31082970
transcript_52916.known	chr16	-	840	3	FSM	ENSG00000167397.15	ENST00000394975.3	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	714	junction_2	41.5	4995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTCTGAACCATGTGT	-32	True	NA	-13	True	AATAAA	-18	NA	31094797	31090853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31093311_31093422_31094556
transcript_52917.known	chr16	-	901	2	FSM	ENSG00000167397.15	ENST00000354895.4	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-14	True	NA	-1	True	AATAAA	-30	NA	31094956	31090841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31094556
transcript_52918.known	chr16	-	1077	4	FSM	ENSG00000167397.15	ENST00000319788.11	1077	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	333.103587491939	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	2	True	NA	-1	True	AATAAA	-30	NA	31094940	31090841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31092782_31092865_31093311_31093422_31094556
transcript_52919.known	chr16	+	2036	12	FSM	ENSG00000103507.14	ENST00000219794.11	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_11	63.5270489666663	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCCGGGTCCCAG	-25	True	NA	15	True	NA	NA	NA	31108385	31112791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868_31112028_31112120
transcript_5292.known	chr1	-	1416	7	FSM	ENSG00000117862.13	ENST00000371626.9	1416	7	0	0	0	0	multi-exon	TRUE	canonical	3	1216	junction_2	108.304226859138	3545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGATGGCCTTTTT	-5	True	NA	-8	True	AATAAA	-15	NA	52055191	52020130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
transcript_52923.known	chr16	+	392	1	FSM	ENSG00000278133.1	ENST00000613584.1	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTTTTTGTAGTTCTT	5615	False	NA	NA	False	AATAAA	-19	NA	31123672	31124064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31123700_31124100
transcript_52924.known	chr16	-	1837	6	FSM	ENSG00000052344.16	ENST00000317508.11	1837	6	0	0	0	0	multi-exon	TRUE	canonical	3	606	junction_1	28.3083026690051	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTGCATGTGTGAAG	-9	True	NA	-17	True	ATTAAA	-15	NA	31135727	31131432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31132336_31132428_31132596_31132681_31132954_31133225_31133389_31135153_31135172_31135413
transcript_52931.known	chr16	-	521	3	FSM	ENSG00000052344.16	ENST00000564025.1	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAGGTCAAAGTTAAT	-9	True	NA	NA	False	NA	NA	NA	31135727	31133199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31133389_31135153_31135172_31135413
transcript_52935.nnic	chr16	-	1121	3	NIC	ENSG00000178226.11	novel	2811	15	NA	NA	628	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTGTGTGGCCTTGTGG	7959	False	NA	-2	True	AATAAA	-14	NA	31142230	31138925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_31139417_31140293_31140416_31141722
transcript_52938.nnic	chr16	-	982	2	NIC	ENSG00000178226.11	novel	2811	15	NA	NA	645	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCTGTGTGGCCTTGTGG	7976	False	NA	-2	True	AATAAA	-14	NA	31142213	31138925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_31139417_31141722
transcript_52948.known	chr16	+	1818	15	FSM	ENSG00000089280.19	ENST00000380244.7	1818	15	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_3	510.220465553262	20159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	0	True	NA	28	True	ATTAAA	-17	NA	31180138	31191602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183860_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_52949.known	chr16	+	1787	14	FSM	ENSG00000089280.19	ENST00000566605.5	1787	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	665.017942543903	8630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	-1	True	NA	28	True	ATTAAA	-17	NA	31180137	31191602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_52950.known	chr16	+	4920	13	FSM	ENSG00000089280.19	ENST00000487509.6	4920	13	0	0	0	0	multi-exon	FALSE	canonical	3	1132	junction_3	443.552225097439	9727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	11	False	NA	28	True	ATTAAA	-17	NA	31180149	31191602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_52951.known	chr16	+	639	4	FSM	ENSG00000089280.19	ENST00000569760.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	2224	junction_1	299.943698420591	29990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTCCTCTTCCCCCTT	1907	False	NA	31	True	ATTAAA	-20	NA	31190215	31191605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31190399_31190741_31190843_31190962_31191111_31191398
transcript_52953.known	chr16	-	757	3	FSM	ENSG00000103490.14	ENST00000247470.10	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	5.5	2192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-9	True	NA	-13	True	AATATA	-18	NA	31202760	31201485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31201842_31202146_31202204_31202416
transcript_52955.known	chr16	+	1095	2	FSM	ENSG00000261359.2	ENST00000561916.2	1095	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTTGTTTGAATCCT	28	False	NA	17	True	ATTAAA	-22	NA	31201884	31203452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31201987_31202459
transcript_52956.known	chr16	-	696	2	FSM	ENSG00000103490.14	ENST00000350605.4	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-5	True	NA	-13	True	AATATA	-18	NA	31202756	31201485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31201842_31202416
transcript_52958.known	chr16	-	589	2	FSM	ENSG00000169900.8	ENST00000302964.4	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCTGCGCGCACACGT	-1	False	NA	-4	True	AATAAA	-19	NA	31217135	31215961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31216158_31216742
transcript_52959.known	chr16	-	372	3	FSM	ENSG00000156885.6	ENST00000287490.5	372	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.5	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGGCTCTGTGGGGAG	-14	True	NA	1	True	AATAAA	-16	NA	31428360	31427730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31427858_31428014_31428152_31428252
transcript_52960.known	chr16	+	1805	11	FSM	ENSG00000140682.19	ENST00000394863.8	1805	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.40337760755184	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	-7	True	NA	6	True	CATAAA	-18	NA	31472151	31477958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_52961.nic	chr16	+	2120	10	NIC	ENSG00000140682.19	novel	1805	11	NA	NA	-9	0	intron_retention	FALSE	canonical	3	12	junction_1	7.37027731190089	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	-27	True	NA	6	True	CATAAA	-18	NA	31472131	31477958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476563_31476861_31477011_31477309
transcript_52962.known	chr16	+	1302	10	FSM	ENSG00000140682.19	ENST00000563712.6	1302	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.2824313788971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGAGGCCGCGCCCTCCC	-5	True	NA	NA	False	NA	NA	NA	31472153	31477600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31472202_31473440_31473557_31473681_31473735_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_52963.nic	chr16	+	1339	7	ISM	ENSG00000140682.19	ENST00000569703.5	1005	8	-43	963	-9	566	5prime_fragment	FALSE	canonical	3	12	junction_1	7.86694914747063	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTGGTGTAAAGATGGG	-27	True	NA	6	True	AATAAA	-15	NA	31472131	31475325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562
transcript_52965.known	chr16	+	1770	10	FSM	ENSG00000140682.19	ENST00000567607.5	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	5.97112393001973	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	248	False	NA	6	True	CATAAA	-18	NA	31473425	31477958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_52966.known	chr16	+	4973	6	FSM	ENSG00000140682.19	ENST00000564176.5	4973	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	4.79165942028438	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	12	True	NA	6	True	CATAAA	-18	NA	31472170	31477958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31473557_31473681_31473978_31474151_31474240_31474349_31474456_31474562_31477011_31477309
transcript_52970.nic	chr16	+	1166	5	ISM	ENSG00000140675.13	ENST00000419665.6	1852	12	4802	-100	-100	0	3prime_fragment	FALSE	canonical	3	4	junction_3	2.58602010819715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTGGCCAAAGTGTCC	3251	False	NA	3	True	AATAAA	-18	NA	31487919	31490769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_31488174_31488382_31488491_31489122_31489339_31490103_31490231_31490308
transcript_52974.known	chr16	+	660	4	FSM	ENSG00000140675.13	ENST00000568891.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTCTGGTTTTGTGGA	3541	False	NA	NA	False	NA	NA	NA	31488209	31490344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31488491_31489122_31489339_31490103_31490231_31490308
transcript_52977.known	chr16	+	655	2	FSM	ENSG00000260625.3	ENST00000569782.2	655	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGATCCCCACAGTTT	-11	True	NA	NA	False	AATAAA	-25	NA	31508470	31509256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31509037_31509167
transcript_52979.known	chr16	-	2785	13	FSM	ENSG00000140688.17	ENST00000327237.7	2785	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	13.3624681685516	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTGCAGCTGGACCC	-2	True	NA	-10	True	AATAAA	-31	NA	31508391	31489474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
transcript_52980.known	chr16	+	961	2	FSM	ENSG00000260625.3	ENST00000651898.1	961	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTAAGTACTTTAAAAACA	-18	True	NA	NA	False	AATAAA	-13	NA	31508463	31509560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31509037_31509172
transcript_52982.known	chr16	+	488	3	FSM	ENSG00000169877.10	ENST00000302312.9	488	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCTTCTCTTTCAT	-1	True	NA	8	True	AATAAA	-23	NA	31527899	31528803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31527963_31528135_31528215_31528457
transcript_52983.nnic	chr16	+	498	2	NNC	ENSG00000169877.10	novel	488	3	NA	NA	236	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCTTCTCTTTCAT	81	False	NA	8	True	AATAAA	-23	NA	31528212	31528803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_31528365_31528457
transcript_52990.known	chr16	+	1812	9	FSM	ENSG00000131797.13	ENST00000254109.10	1844	9	32	0	4	0	multi-exon	TRUE	canonical	1	2	junction_1	6.63207169744115	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	-11	True	NA	NA	False	NA	NA	NA	31700589	31707437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31700739_31701662_31701859_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_52993.known	chr16	+	1571	8	FSM	ENSG00000131797.13	ENST00000693004.1	1643	8	72	0	5	0	multi-exon	FALSE	canonical	2	5	junction_1	5.71785602748272	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	34	True	NA	NA	False	NA	NA	NA	31700634	31707437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31700739_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_52999.known	chr16	+	1449	7	FSM	ENSG00000131797.13	ENST00000686087.1	1777	7	36	292	1	-15	multi-exon	FALSE	canonical	2	5	junction_1	5.5502752684489	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTCT	-6	True	NA	NA	False	NA	NA	NA	31700594	31707422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31700739_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_53.known	ERCC-00120	+	520	1	FSM	ERCC-00120A	DQ854992	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00120_+_0_500
transcript_5300.known	chr1	+	2159	5	FSM	ENSG00000134717.18	ENST00000472944.6	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	450.064439830565	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	-8	True	NA	45	True	NA	NA	NA	52056303	52088418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52056380_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_53004.known	chr16	+	572	6	FSM	ENSG00000197302.11	ENST00000544044.1	572	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.7820085666965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAGGACATGAGCCAAAA	29	True	NA	NA	False	NA	NA	NA	31713292	31793707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31753765_31753901_31759356_31759467_31792629_31792731_31793334_31793412_31793701
transcript_53012.known	chr16	+	1670	5	FSM	ENSG00000197302.11	ENST00000531864.6	1670	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	9.63068014212911	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTATAATTAACTTTCA	-17	True	NA	NA	False	TTTAAA	-11	NA	31713246	31794869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31753765_31753901_31792629_31792731_31793334_31793412_31793701
transcript_53015.known	chr16	+	518	5	FSM	ENSG00000197302.11	ENST00000529515.2	5982	5	62	5402	3	-52	multi-exon	FALSE	canonical	3	39	junction_4	29.5338788512447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGCCAAGGCATAAGC	2	True	NA	NA	False	AATAAA	-11	NA	31713305	31754484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31754454
transcript_53017.known	chr16	+	2769	5	FSM	ENSG00000197302.11	ENST00000316491.14	2759	5	-10	0	2	0	multi-exon	FALSE	canonical	3	74	junction_4	17.4839211849059	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTGTATTCATTTA	-30	True	NA	5	True	AATAAA	-14	NA	31713233	31761565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31759356
transcript_53020.known	chr16	+	1214	4	FSM	ENSG00000197302.11	ENST00000529943.6	1214	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	44.1688678696759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACCATTGCAAACGTAAAA	NA	False	NA	NA	False	NA	NA	NA	31713228	31754536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713449_31722625_31722753_31723257_31723354_31753765
transcript_53026.known	chr16	+	639	3	FSM	ENSG00000197302.11	ENST00000533488.6	639	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTAAAGAATGTGACAA	9	True	NA	NA	False	AAGAAA	-35	NA	31713272	31754795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31753765_31753901_31754454
transcript_53027.known	chr16	+	481	3	FSM	ENSG00000197302.11	ENST00000542684.5	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	24	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAATTAAATGGG	23	True	NA	NA	False	NA	NA	NA	31713286	31759553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31753765_31753901_31759356
transcript_53030.known	chr16	+	1339	2	FSM	ENSG00000197302.11	ENST00000398696.3	1339	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATCAGAGAATTCACACT	9	True	NA	NA	False	NA	NA	NA	31713272	31754928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713449_31753765
transcript_53032.nnic	chr16	+	363	2	ISM	ENSG00000197302.11	ENST00000689850.1	2924	6	-6	47275	0	-39601	5prime_fragment	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTATTTTGGCCTTACCT	-20	True	NA	NA	False	ATTAAA	-22	NA	31713243	31714255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_31713436_31714084
transcript_53033.known	chr16	+	680	5	FSM	ENSG00000185947.15	ENST00000394846.7	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	33.0189339621981	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAACTTTGATCAATATA	-2	True	NA	NA	False	NA	NA	NA	31873806	31914725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31890206_31890251_31914475
transcript_53037.known	chr16	+	3268	4	FSM	ENSG00000185947.15	ENST00000300870.15	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	27.7408643620842	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAAATTACTTCAATT	-2	True	NA	77	True	ATTAAA	-20	NA	31873806	31917357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475
transcript_53040.known	chr16	-	5177	13	FSM	ENSG00000171241.9	ENST00000303383.8	5177	13	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_8	16.2685791225499	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGTAATATATCAATGC	-29	True	NA	72	True	AATATA	-17	NA	46621379	46578590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46582055_46583515_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
transcript_53046.known	chr16	-	530	2	FSM	ENSG00000171241.9	ENST00000564272.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATGGCATCGCTTAT	-1	True	NA	NA	False	AATAAA	-27	NA	46621351	46620465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46620901_46621256
transcript_53047.known	chr16	-	1591	1	FSM	ENSG00000261512.2	ENST00000574180.1	1591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTAGAGATGGGGTTTC	NA	False	NA	NA	False	ATTAAA	-31	NA	46624451	46622860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46622900_46624500
transcript_53048.known	chr16	-	6776	17	FSM	ENSG00000069329.18	ENST00000299138.12	6776	17	0	0	0	0	multi-exon	TRUE	canonical	3	528	junction_3	61.7636624561724	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGGAGAAAGAAAAAAA	3	True	NA	NA	False	NA	NA	NA	46689178	46656131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46689130
transcript_53051.known	chr16	-	4017	17	FSM	ENSG00000069329.18	ENST00000568784.6	4017	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	165.800602664013	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGCTTTTTTTCCCC	34	False	NA	-7	True	AATAAA	-15	NA	46689147	46659676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46688313
transcript_53062.known	chr16	+	1615	7	FSM	ENSG00000091651.9	ENST00000219097.7	1615	7	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	35.3761532988286	1733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	-12	True	NA	27	True	AATAAA	-18	NA	46689658	46698394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_53066.known	chr16	+	3992	12	FSM	ENSG00000166123.14	ENST00000340124.9	3992	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	254.22122207256	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGTTTAACTTTCATTGT	-13	True	NA	28	True	AATAAA	-17	NA	46884361	46931289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_46884468_46884693_46884959_46897647_46897738_46900681_46900791_46906841_46906976_46909683_46909928_46916627_46916708_46918620_46918758_46922241_46922417_46924388_46924545_46926924_46927038_46928906
transcript_53068.known	chr16	-	3008	9	FSM	ENSG00000069345.12	ENST00000317089.10	3008	9	0	0	0	0	multi-exon	FALSE	canonical	3	634	junction_7	43.6348484585429	1235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGTAGTCTGTCTTT	-3	True	NA	-9	True	AATAAA	-17	NA	46973674	46955361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
transcript_53078.known	chr16	+	516	2	FSM	ENSG00000261173.1	ENST00000562536.1	516	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAGCCACTGTAGC	61	False	NA	14	True	AATAAA	-22	NA	46973988	46978983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_46974126_46978604
transcript_5308.known	chr1	+	794	5	FSM	ENSG00000134717.18	ENST00000489308.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_3	442.752188023955	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTCTTTTCCC	4	True	NA	9	True	AATAAA	-14	NA	52056270	52087155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52086111_52086172_52086711
transcript_53080.known	chr16	-	3185	18	FSM	ENSG00000129636.13	ENST00000320640.11	3185	18	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_13	43.3152122522417	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTTCAGTGAGTTT	11	True	NA	NA	False	AATAAA	-16	NA	47461063	47154390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_5309.known	chr1	+	5148	19	FSM	ENSG00000157077.16	ENST00000287727.8	5148	19	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	3.93661194179042	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGCACTCTTTGTACA	-13	True	NA	3	True	AATAAA	-14	NA	52142088	52346634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52142404_52216368_52216475_52233170_52233277_52237487_52239596_52263772_52263873_52266654_52266832_52268462_52268633_52274463_52274585_52278491_52278615_52281660_52281817_52293452_52293678_52295894_52295978_52303820_52303926_52332767_52332919_52334687_52334769_52337771_52337935_52340125_52340232_52344767_52344945_52346059
transcript_53090.nic	chr16	-	858	8	ISM	ENSG00000129636.13	ENST00000320640.11	3185	18	-9	211368	-9	-188	5prime_fragment	FALSE	canonical	3	338	junction_3	47.5325881766974	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGCCTTTCCAATTCT	2	True	NA	NA	False	AAAAAG	-1	NA	47461072	47365758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_53094.nic	chr16	-	1175	6	NIC	ENSG00000129636.13	novel	2663	5	NA	NA	-9	1530	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	165.953728490806	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGATTTTTTACTTAATC	2	True	NA	NA	False	AATAAA	-15	NA	47461072	47449865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_47450454_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_53096.known	chr16	-	2663	5	FSM	ENSG00000129636.13	ENST00000565940.6	2663	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	178.49562319564	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCTTTTGACTTTGTAA	2221	False	NA	NA	False	AATAAA	-17	NA	47459130	47448097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_47450454_47451395_47451471_47452732_47452791_47454012_47454159_47459102
transcript_53097.known	chr16	+	3829	32	FSM	ENSG00000102893.16	ENST00000566044.5	3829	32	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	33.1788267927984	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	-3	True	NA	13	True	AATAAA	-16	NA	47461294	47699745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_47461427_47463881_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_5310.known	chr1	-	5338	25	FSM	ENSG00000154222.15	ENST00000284376.8	5338	25	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_18	8.2525248661647	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAGTCTTGCTTACAA	-38	True	NA	-2	True	AATAAA	-20	NA	52366205	52350596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52353224_52353517_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357899_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
transcript_53102.known	chr16	+	5464	31	FSM	ENSG00000102893.16	ENST00000299167.12	5464	31	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	40.3393383959408	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGCCAATGCCTGTTTT	-6	True	NA	5	True	AGTAAA	-19	NA	47461325	47701523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_47461427_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_53111.nic	chr16	+	1017	8	ISM	ENSG00000102893.16	ENST00000567402.5	1617	11	-16	10268	-6	-7188	5prime_fragment	FALSE	canonical	3	12	junction_1	69.0619361183001	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAATTTTTTTTGA	-12	True	NA	NA	False	ACTAAA	-33	NA	47461319	47580570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_47461427_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294
transcript_53114.known	chr16	-	1325	2	FSM	ENSG00000261325.2	ENST00000570024.2	1330	2	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGTCTCTGGGTCTTTTC	NA	False	NA	NA	False	AATAAA	-15	NA	47887130	47849313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_47849949_47886440
transcript_53116.known	chr16	+	805	3	FSM	ENSG00000260450.2	ENST00000657877.1	805	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCTTTGCTTCTTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	47965619	47971693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_47966011_47966885_47966969_47971362
transcript_53119.known	chr16	+	8195	15	FSM	ENSG00000102910.14	ENST00000285737.9	8195	15	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_6	17.6844506818382	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGGTTAGGATCATA	-47	True	NA	NA	False	GATAAA	-18	NA	48244299	48357349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_48244622_48252130_48252366_48256609_48256742_48258617_48258741_48261423_48261588_48262777_48262873_48270015_48270275_48277337_48277480_48296014_48296166_48299661_48299789_48303171_48303306_48334215_48334359_48347506_48347715_48348099_48348291_48351580
transcript_5312.known	chr1	-	3080	17	FSM	ENSG00000085840.13	ENST00000371566.1	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_16	64.1209489461128	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTGTGAAGTTATTA	81	False	NA	-3	True	ATTAAA	-17	NA	52404387	52372830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52383829_52383938_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402226_52404245
transcript_53125.known	chr16	-	2683	7	FSM	ENSG00000196470.12	ENST00000568007.5	2683	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.19215773966098	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGCAAAACTAACATTCTT	16	True	NA	NA	False	AATAAA	-21	NA	48448402	48356363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_48356511_48361487_48362431_48387053_48387269_48392756_48392893_48393879_48393961_48403569_48403668_48447339
transcript_53126.known	chr16	-	2415	2	FSM	ENSG00000196470.12	ENST00000356721.3	2415	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	NA	False	NA	-23	True	ATTAAA	-25	NA	48365901	48360530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_48362431_48365386
transcript_53127.nnic	chr16	-	1956	2	NNC	ENSG00000196470.12	novel	2415	2	NA	NA	582	0	intron_retention	FALSE	canonical	2	24	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	2413	False	NA	-23	True	ATTAAA	-25	NA	48384831	48360530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_48362431_48384775
transcript_53128.known	chr16	-	2110	2	FSM	ENSG00000196470.12	ENST00000394725.3	2110	2	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-2	True	NA	-23	True	ATTAAA	-25	NA	48385413	48360530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_48362431_48385203
transcript_53132.known	chr16	-	7077	7	FSM	ENSG00000102921.8	ENST00000262384.4	7077	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	28.4160557119073	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGACAGTGCCTTCTT	10	True	NA	-4	True	AATAAA	-17	NA	48610180	48538725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_48543262_48546146_48546255_48548006_48548115_48551385_48551483_48553538_48553670_48560753_48562445_48609774
transcript_53133.nnic	chr16	+	427	2	FSM	ENSG00000289119.1	ENST00000690237.1	462	2	0	35	0	-35	multi-exon	FALSE	canonical	2	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1	True	NA	NA	False	NA	NA	NA	48610309	48610872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_48610519_48610654
transcript_53136.known	chr16	+	2237	4	FSM	ENSG00000260086.4	ENST00000568150.4	2244	4	7	0	7	0	multi-exon	FALSE	canonical	2	7	junction_2	0.471404520791032	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAATAAAAGACAAA	1929	False	NA	NA	False	GATAAA	-37	NA	48623421	48746318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_48623604_48741282_48741403_48744246_48744330_48744466
transcript_53141.known	chr16	+	674	3	FSM	ENSG00000260086.4	ENST00000565072.1	674	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCAACAAGAGCAAAACTC	5	True	NA	NA	False	NA	NA	NA	48623461	48676752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_48623604_48671860_48672034_48676393
transcript_53144.nnic	chr16	+	772	2	FSM	ENSG00000260086.4	ENST00000686696.1	750	2	-23	1	-4	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTGCGACATTTGCTT	1918	False	NA	NA	False	AATAAA	-16	NA	48623410	48676972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_48623604_48676393
transcript_53145.nnic	chr16	+	594	2	NNC	ENSG00000260086.4	novel	750	2	NA	NA	1	1450	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTACAGGAATTAGTTGT	1923	False	NA	NA	False	AATAAA	-20	NA	48623415	48678423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_48623604_48678017
transcript_53148.nnic	chr16	+	664	3	NNC	ENSG00000260052.1	novel	539	2	NA	NA	-13706	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATTTGTAGTAGTAAT	0	True	NA	NA	False	AATAAA	-19	NA	48623436	48638719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_48623604_48637184_48637285_48638322
transcript_53150.nnic	chr16	+	574	2	NIC	ENSG00000260086.4	novel	750	2	NA	NA	-1	-34753	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAGTAGTAATTTGTAG	-4	True	NA	NA	False	AATAAA	-25	NA	48623432	48638725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_48623604_48638322
transcript_53151.known	chr16	+	1266	5	FSM	ENSG00000279249.3	ENST00000665277.1	1266	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTATGTGTGTGAGAAAA	0	True	NA	NA	False	AATAAA	-26	NA	49282036	49290477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49285520_49285624_49287366_49287476_49289537_49289656_49289737
transcript_53152.known	chr16	+	1191	4	FSM	ENSG00000279249.3	ENST00000657271.1	1191	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	36	False	NA	NA	False	AATAAA	-21	NA	49282097	49290472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49287366_49287476_49289443_49289656_49289737
transcript_53153.known	chr16	+	1016	4	FSM	ENSG00000279249.3	ENST00000654606.1	1016	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	7994	False	NA	NA	False	AATAAA	-21	NA	49282020	49290472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49287366_49287476_49289537_49289656_49289895
transcript_53157.nic	chr16	-	459	3	ISM	ENSG00000102935.12	ENST00000563137.7	7968	8	282	243145	282	-93	5prime_fragment	FALSE	canonical	3	1134	junction_1	13	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAGTTAATGTCATTT	1959	False	NA	-6	True	ATTAAA	-16	NA	49855830	49730668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_49730972_49789486_49789547_49855734
transcript_53158.known	chr16	-	615	1	FSM	ENSG00000275155.1	ENST00000615979.1	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTGCACTGAATTTT	9600	False	NA	0	True	AATAAA	-18	NA	49847632	49847017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_49847000_49847600
transcript_53160.known	chr16	+	2965	7	FSM	ENSG00000205423.12	ENST00000458059.7	2965	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	94.6337971105226	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTTTTTCTTTATTGT	NA	False	NA	16	True	AATAAA	-22	NA	50024409	50037088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
transcript_53161.known	chr16	+	656	6	FSM	ENSG00000205423.12	ENST00000562576.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	91.9251869728857	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTGCAGATGAAGT	29	False	NA	NA	False	NA	NA	NA	50025270	50035696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50025341_50026395_50026468_50029724_50029799_50033396_50033507_50034106_50034157_50035416
transcript_53162.known	chr16	+	1992	5	FSM	ENSG00000205423.12	ENST00000568890.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	95.1774658204346	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGACTTTTTCTTTAT	13	True	NA	13	True	AATAAA	-19	NA	50025254	50037085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50025341_50026395_50026468_50033396_50033507_50034101_50034157_50035416
transcript_53168.known	chr16	-	2145	17	FSM	ENSG00000166164.16	ENST00000394689.2	2145	17	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	102.880923280266	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAATGTGCTTGGGGC	271	False	NA	-29	True	AATAAA	-21	NA	50368779	50319029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320778_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_53173.nic	chr16	-	1114	7	ISM	ENSG00000166164.16	ENST00000394689.2	2145	17	-222	15681	-13	0	5prime_fragment	FALSE	canonical	3	439	junction_4	45.8127226385374	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAAGATCTTTGGGATGT	-29	True	NA	NA	False	AATAAA	-3	NA	50369001	50334710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_53174.known	chr16	+	1579	4	FSM	ENSG00000121281.13	ENST00000568930.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	0.816496580927726	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTCCAGGCCAGCTGG	9102	False	NA	NA	False	NA	NA	NA	50313103	50315738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50314063_50314291_50314407_50315013_50315139_50315358
transcript_53178.nic	chr16	-	256	2	ISM	ENSG00000166164.16	ENST00000567826.1	740	5	94	18127	-47	-18127	5prime_fragment	FALSE	canonical	3	575	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAGCAGATTCCAGG	224	False	NA	17	True	AAAAAG	-10	NA	50368826	50368143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_50368299_50368725
transcript_53181.known	chr16	+	3513	18	FSM	ENSG00000083799.18	ENST00000569418.5	3513	18	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	17.7865078526308	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	7	False	NA	10	True	AATAAA	-17	NA	50742049	50796881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50742125_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_53188.known	chr16	+	1307	5	FSM	ENSG00000261241.8	ENST00000668895.1	1307	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTCTCACAGTCTG	-16	True	NA	NA	False	AATAAA	-14	NA	50880081	50901061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50880262_50884211_50884278_50884481_50884742_50893660_50893863_50900462
transcript_53189.known	chr16	+	1354	5	FSM	ENSG00000261241.8	ENST00000663343.1	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTCTCACAGTCTG	-18	True	NA	NA	False	AATAAA	-14	NA	50880079	50901061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50880262_50884211_50884323_50884481_50884742_50893660_50893863_50900462
transcript_5319.nic	chr1	-	1331	6	ISM	ENSG00000085840.13	ENST00000371568.8	3121	17	-69	20617	-69	-20615	5prime_fragment	FALSE	canonical	3	212	junction_1	40.6280691148373	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTGACCAGGGACATTAC	NA	False	NA	NA	False	AAAACA	-8	NA	52404492	52393445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402229_52404245
transcript_53191.known	chr16	+	965	3	FSM	ENSG00000261241.8	ENST00000657894.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATCTGTGTCTCACAGT	-3	True	NA	NA	False	AATAAA	-11	NA	50880094	50901058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50880262_50893660_50893863_50900462
transcript_53192.known	chr16	+	2248	2	FSM	ENSG00000261241.8	ENST00000576842.2	2264	2	16	0	16	0	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTCTGAGAGTCCCT	25	False	NA	NA	False	AATAAA	-17	NA	50880208	50884101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50880262_50881906
transcript_53193.known	chr16	+	2541	2	FSM	ENSG00000261241.8	ENST00000655464.1	2541	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTCTGAGAGTCCCTGC	-7	True	NA	NA	False	AATAAA	-19	NA	50880176	50884103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50880521_50881906
transcript_53194.known	chr16	+	619	2	FSM	ENSG00000261637.3	ENST00000653336.1	619	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCAGCTTCTGTGTTG	NA	False	NA	NA	False	ATTAAA	-28	NA	51030738	51035776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_51031117_51035535
transcript_53195.known	chr16	-	5134	3	FSM	ENSG00000103449.13	ENST00000251020.9	5134	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	130	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTCTGTGTTTTTAG	3	True	NA	17	True	GATAAA	-7	NA	51151270	51135981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_51137553_51138687_51142146_51151165
transcript_53196.known	chr16	+	1377	1	FSM	ENSG00000224578.5	ENST00000562726.1	1377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	132164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTGCAGAACACCTAT	NA	False	NA	NA	False	GATAAA	-29	NA	51645755	51647132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_51645800_51647100
transcript_5320.nnic	chr1	-	808	3	NNC	ENSG00000085840.13	novel	3121	17	NA	NA	-69	1036	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	127	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCAAGGTTTCTTGTA	NA	False	NA	NA	False	AATAAA	-44	NA	52404492	52371792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_52372254_52402128_52402229_52404245
transcript_53200.known	chr16	-	4959	7	FSM	ENSG00000103460.17	ENST00000219746.14	4959	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	12.6183288204985	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAGAAATGTGGTATC	-7	True	NA	NA	False	AATAAA	-19	NA	52547143	52436416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_52439969_52444275_52444357_52445993_52446222_52450276_52450547_52463933_52464189_52468508_52468575_52546636
transcript_53202.known	chr16	-	1687	3	FSM	ENSG00000277639.2	ENST00000619363.2	1687	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCCTGTGCATAGTGAG	NA	False	NA	NA	False	ATTAAA	-19	NA	53052849	53042744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53044264_53047204_53047284_53052760
transcript_53214.known	chr16	+	11504	39	FSM	ENSG00000177200.18	ENST00000564845.5	11504	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.10100295833626	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTTAATTATTT	NA	False	NA	25	True	ATTAAA	-27	NA	53130920	53327451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53131059_53155925_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307906_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
transcript_5322.known	chr1	-	2910	21	FSM	ENSG00000134744.14	ENST00000484723.6	2910	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_20	75.702889641017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCTTTGGCTGGGACTG	-13	True	NA	NA	False	AAAAAG	-38	NA	52553458	52446399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52446443_52446589_52446668_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52552930_52553091_52553432
transcript_53228.known	chr16	+	720	2	FSM	ENSG00000177200.18	ENST00000561869.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATCATGTTAGAGTC	27	True	NA	NA	False	NA	NA	NA	53055038	53121980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53055078_53121299
transcript_53231.known	chr16	+	968	2	FSM	ENSG00000177200.18	ENST00000564582.2	968	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTGTTCAATATTTAT	-11	True	NA	14	True	AATAAA	-28	NA	53099179	53122178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53099269_53121299
transcript_53236.known	chr16	+	703	3	FSM	ENSG00000177200.18	ENST00000565442.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	-12	True	NA	NA	False	ATTAAA	-17	NA	53208450	53222755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53208710_53209481_53209814_53222643
transcript_53237.known	chr16	+	4854	22	FSM	ENSG00000103479.17	ENST00000262133.11	4854	22	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_15	31.883148329365	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGTTTGGTTATATTG	4	True	NA	11	True	AATAAA	-15	NA	53434470	53491648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53465603_53467057_53467170_53469915_53470186_53470382_53470664_53470745_53470923_53479153_53479226_53479885_53479992_53480566_53480770_53481670_53481836_53490129
transcript_53238.known	chr16	-	2133	11	FSM	ENSG00000166971.17	ENST00000300245.8	2133	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	48.0001041665536	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAATAACATTTTCT	-26	False	NA	NA	False	AATAAA	-20	NA	53503244	53491378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53501520_53501571_53503146
transcript_53240.known	chr16	-	2384	10	FSM	ENSG00000166971.17	ENST00000394657.12	2384	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.7406298511598	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGTTTTGTATTTA	9	True	NA	NA	False	ATTAAA	-19	NA	53503209	53491039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_5325.known	chr1	-	5858	30	FSM	ENSG00000134744.14	ENST00000371544.7	5858	30	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	46.6472328030371	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTAATCTGTTGTATA	-12	True	NA	-7	True	AATAAA	-21	NA	52553100	52423274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52424003_52425348_52425508_52431012_52431461_52435364_52435466_52436754_52436976_52438219_52438336_52445786_52445870_52445956_52446005_52446264_52446443_52446589_52446668_52458335_52458450_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52525562_52526374_52552930
transcript_53250.known	chr16	+	6326	21	FSM	ENSG00000103479.17	ENST00000680543.1	6326	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	55.9847077334516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGCATTTATAAATTA	NA	False	NA	-9	True	NA	NA	NA	53434417	53491628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53434797_53439015_53439147_53442657_53442859_53447041_53447107_53451702_53451832_53453451_53453613_53453704_53453770_53454655_53454843_53459450_53459618_53461740_53461851_53462551_53462656_53464225_53464364_53465437_53467170_53469915_53470664_53470745_53470923_53479153_53479226_53479885_53479992_53480566_53480770_53481670_53481836_53490129_53490302_53490514
transcript_53251.known	chr16	-	1162	10	FSM	ENSG00000166971.17	ENST00000570004.5	1162	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	40.4145188432738	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGCCAGTGTTTTCCA	-5	True	NA	-5	True	AGTAAA	-17	NA	53503223	53492304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503117
transcript_53252.known	chr16	-	7935	27	FSM	ENSG00000103494.16	ENST00000647211.2	7935	27	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	22.8692255944521	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCTACTATCTAATTTG	-5	True	NA	NA	False	AATAAA	-21	NA	53703859	53598152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53602189_53605480_53605615_53610966_53611052_53619024_53619209_53622218_53622357_53636438_53636513_53637694_53637855_53638309_53638412_53641032_53641117_53641284_53641476_53645624_53646004_53648963_53649116_53652534_53652988_53656471_53656590_53657452_53657633_53658413_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
transcript_53254.nic	chr16	-	1524	12	ISM	ENSG00000103494.16	ENST00000564374.5	3877	25	-28	53018	21	4469	5prime_fragment	FALSE	canonical	3	34	junction_7	27.9409057633433	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTTCTGAACTTCATCG	NA	False	NA	NA	False	TATAAA	-3	NA	53703917	53658412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_53658465_53658771_53658879_53664869_53665010_53671509_53671584_53672869_53673017_53675016_53675123_53686432_53686577_53687862_53687966_53692065_53692365_53696150_53696296_53700638_53700731_53703802
transcript_5326.known	chr1	-	2152	3	FSM	ENSG00000134744.14	ENST00000355809.4	2152	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAATAAAACTATTGAC	451	False	NA	NA	False	NA	NA	NA	52552994	52514777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52516055_52525562_52526374_52552930
transcript_53263.known	chr16	-	2429	4	FSM	ENSG00000103494.16	ENST00000568653.7	2429	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	52.2323867176508	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTGTTTTTATTTTC	7	True	NA	NA	False	AATAAA	-23	NA	53703847	53693311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53695459_53696150_53696296_53700638_53700731_53703802
transcript_53266.known	chr16	-	893	3	FSM	ENSG00000103494.16	ENST00000566096.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	15.5	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGATTTATGTGCAAAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	53703938	53695630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53696296_53700638_53700731_53703802
transcript_53269.nic	chr16	+	2188	10	NIC	ENSG00000140718.21	novel	1636	10	NA	NA	-24	-500	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	123.762317007687	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCCTTAAATTTGATTA	316	False	NA	NA	False	AATAAA	-14	NA	53704131	54040226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54039344_54039435_54039545
transcript_53271.known	chr16	+	11573	9	FSM	ENSG00000140718.21	ENST00000471389.6	11573	9	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	39.645105309483	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATGCTTGGTGTTA	-6	True	NA	NA	False	AATAAA	-14	NA	53704155	54121941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54111761
transcript_53276.known	chr16	-	2625	4	FSM	ENSG00000177508.12	ENST00000329734.4	2625	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	11.8977121983832	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGCCTGTCTGCCCCCTCG	-4	True	NA	-19	True	AATAAA	-26	NA	54286787	54283303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54283741_54284245_54284313_54284496_54285614_54285783
transcript_53279.known	chr16	-	1866	5	FSM	ENSG00000245694.11	ENST00000559598.7	1866	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	109.130655638093	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTAACCTTTTGGGGT	19	True	NA	-32	True	TATAAA	-37	NA	54928827	54917969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928493
transcript_53280.known	chr16	-	1603	5	FSM	ENSG00000245694.11	ENST00000502066.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	15.1739909054935	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAACCTTTTGGGGTTT	8	True	NA	-30	True	ATTAAA	-2	NA	54928838	54917967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928769
transcript_53281.known	chr16	-	1883	5	FSM	ENSG00000245694.11	ENST00000660344.1	1883	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	116.448218105731	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTGACTCACCCGGC	-34	True	NA	-18	True	ATTAAA	-14	NA	54929189	54917955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54919210_54920297_54920328_54923584_54923651_54925100_54925214_54928769
transcript_53286.nnic	chr16	+	2835	14	NNC	ENSG00000087245.13	novel	3514	13	NA	NA	-61	0	intron_retention	FALSE	non_canonical	0	0	junction_1	75.1492400761556	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTTTGCCATCTGTTT	162	False	NA	10	True	AATAAA	-16	NA	55479136	55506237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_55479276_55479561_55479633_55482908_55483136_55484015_55484165_55485298_55485428_55485603_55485778_55488542_55488717_55489650_55489825_55491800_55491957_55493157_55493294_55496925_55497063_55498288_55498449_55502778_55502889_55505338
transcript_53290.known	chr16	+	5313	14	FSM	ENSG00000087253.13	ENST00000262134.10	5313	14	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_12	5.15327206905976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTCTTCTGGTGGGTT	-6	True	NA	NA	False	ATTAAA	-17	NA	55509071	55586666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_55509353_55525507_55525648_55528376_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55545734_55545818_55549276_55549403_55550948_55551103_55574630_55574730_55579108_55579245_55582913
transcript_53292.nic	chr16	+	1157	9	NIC	ENSG00000087253.13	novel	5313	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	6.2737050456648	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCAATCTTCCTCATC	-10	True	NA	7	True	AATAAA	-21	NA	55509067	55542028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_55509353_55525507_55525648_55528376_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55541837
transcript_53296.nnic	chr16	+	573	3	NNC	ENSG00000228695.10	novel	1704	14	NA	NA	32479	198	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	1	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	NA	False	NA	NA	False	AATAAA	-20	NA	55793120	55794158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_55793239_55793407_55793481_55793776
transcript_53297.known	chr16	-	1946	14	FSM	ENSG00000198848.13	ENST00000360526.8	1946	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	2.67577340475786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	11	True	NA	NA	False	AATAAA	-20	NA	55833096	55802850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_55803233_55803528_55803602_55806332_55806465_55810516_55810665_55810926_55811011_55812902_55813044_55816923_55816963_55819534_55819640_55820371_55820480_55821367_55821522_55823549_55823684_55826150_55826296_55828766_55828975_55833003
transcript_53299.nnic	chr16	-	540	3	NNC	ENSG00000198848.13	novel	659	4	NA	NA	6800	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	1	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	5238	False	NA	NA	False	AATAAA	-20	NA	55803855	55802850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_55803233_55803528_55803602_55803770
transcript_53300.nic	chr16	-	622	2	ISM	ENSG00000198848.13	ENST00000563241.5	509	3	6887	-85	6887	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	5325	False	NA	NA	False	AATAAA	-20	NA	55803768	55802850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_55803233_55803528
transcript_53301.nic	chr16	-	642	2	ISM	ENSG00000159398.16	ENST00000544479.1	1067	8	24961	-240	24961	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACGGGGGCAGAATTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	55846880	55846153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_55846683_55846767
transcript_53303.known	chr16	+	930	2	FSM	ENSG00000087258.16	ENST00000569295.6	930	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTCCAGGCCTGTTTT	5	True	NA	4	True	TTTAAA	-29	NA	56191546	56192696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56192354_56192573
transcript_53304.known	chr16	-	2341	18	FSM	ENSG00000125124.14	ENST00000682360.1	2341	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	47.7566640578853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTAGCTTTGTACCTCTCT	-24	True	NA	NA	False	AATAAA	-8	NA	56520049	56470415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56470615_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519956
transcript_53305.known	chr16	-	2835	17	FSM	ENSG00000125124.14	ENST00000682737.1	2835	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	43.4690982193098	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	56520114	56484132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519956
transcript_53306.known	chr16	-	2540	18	FSM	ENSG00000125124.14	ENST00000682855.1	2540	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	41.6706480220118	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTTCCTAAATCTTGG	1	True	NA	NA	False	AATAAA	-21	NA	56520024	56470402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56470615_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_53307.known	chr16	-	2704	17	FSM	ENSG00000125124.14	ENST00000245157.11	2704	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	34.6896395736537	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTTGATTGATTATA	1	True	NA	0	True	ATTAAA	-17	NA	56520024	56484384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_53308.known	chr16	-	2638	16	FSM	ENSG00000125124.14	ENST00000682449.1	2638	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	45.8473796658241	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	16	False	56520091	28	True	ATTAAA	-45	NA	56520075	56484356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_5331.known	chr1	+	5233	10	FSM	ENSG00000134748.13	ENST00000257181.10	5233	10	0	0	0	0	multi-exon	TRUE	canonical	3	384	junction_3	28.4752437421146	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGTTGGGAGTTAAAA	-5	True	NA	NA	False	AATAAA	-26	NA	52404601	52420836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52404880_52405679_52405840_52408568_52408691_52411114_52411201_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_53314.known	chr16	+	4587	13	FSM	ENSG00000087263.17	ENST00000566157.6	4587	13	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_8	26.8762596604017	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTTCTCTCTTTAT	8	True	NA	7	True	GATAAA	-24	NA	56451553	56479104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56451767_56453262_56453409_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_5332.known	chr1	+	1059	8	FSM	ENSG00000134748.13	ENST00000474048.1	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	147.989381858487	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGTAGTTTAGTTTTT	21	False	NA	33	True	ATTAAA	-22	NA	52404627	52417022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52404880_52405679_52405714_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_53328.known	chr16	-	4393	7	FSM	ENSG00000167005.14	ENST00000300291.10	4393	7	0	0	0	0	multi-exon	TRUE	canonical	3	1151	junction_4	78.4615971174575	3511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGATTGTTTTGG	-5	True	NA	-7	True	AATAAA	-18	NA	56451332	56429132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56432734_56434330_56434446_56434753_56434830_56439656_56439747_56446625_56446690_56447788_56447990_56451086
transcript_53329.known	chr16	+	2415	13	FSM	ENSG00000087263.17	ENST00000336111.9	2415	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	160.43714155048	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAGAAAA	-22	True	NA	NA	False	NA	NA	NA	56451523	56477129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56451568_56453262_56453381_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_53330.known	chr16	+	406	3	FSM	ENSG00000087250.9	ENST00000200691.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAAGGACTGGTCTCT	0	True	NA	NA	False	AATAAA	-15	NA	56589527	56591085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56589622_56589869_56589936_56590839
transcript_53331.known	chr16	+	421	3	FSM	ENSG00000087250.9	ENST00000565838.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCATGAGCCAAGGACT	5435	False	NA	NA	False	AATAAA	-8	NA	56589073	56591078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56589190_56589869_56589936_56590839
transcript_53333.known	chr16	+	401	3	FSM	ENSG00000125148.7	ENST00000245185.6	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	5	3133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	-2	True	NA	15	True	AATAAA	-16	NA	56608583	56609497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56608684_56608991_56609058_56609262
transcript_53334.known	chr16	+	581	2	FSM	ENSG00000125148.7	ENST00000561491.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTCTCTGGTTTCC	20	False	NA	12	True	AATAAA	-13	NA	56608605	56609494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56608684_56608991
transcript_53335.known	chr16	+	416	3	FSM	ENSG00000125148.7	ENST00000567300.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	60	False	NA	15	True	AATAAA	-16	NA	56608689	56609497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56608805_56608991_56609058_56609262
transcript_53336.known	chr16	+	704	3	FSM	ENSG00000169715.15	ENST00000306061.10	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	0.5	2088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	7297	False	NA	16	True	AATAAA	-18	NA	56625474	56627112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56625880_56626465_56626532_56626879
transcript_53338.known	chr16	+	746	2	FSM	ENSG00000169715.15	ENST00000330439.7	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	-3	True	NA	16	True	AATAAA	-18	NA	56625780	56627112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56625880_56626465
transcript_53339.known	chr16	+	332	2	FSM	ENSG00000169715.15	ENST00000568293.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	-3	True	NA	16	True	AATAAA	-18	NA	56625780	56627112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56625880_56626879
transcript_53340.known	chr16	+	398	3	FSM	ENSG00000205364.4	ENST00000379818.4	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	0.5	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	-1	True	NA	4	True	AATAAA	-17	NA	56632658	56633981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56632760_56633339_56633406_56633750
transcript_53341.known	chr16	+	186	3	FSM	ENSG00000255986.6	ENST00000444023.4	186	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAACAGCTCTTCTCC	90	False	NA	NA	False	NA	NA	NA	56635817	56636943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56635846_56636438_56636505_56636851
transcript_53342.known	chr16	+	396	3	FSM	ENSG00000205362.11	ENST00000290705.12	396	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTCTGGTTTTCTTT	-2	True	NA	NA	False	AATAAA	-15	NA	56638665	56640087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56638767_56639263_56639330_56639858
transcript_53343.nnic	chr16	+	195	3	Fusion	ENSG00000205362.11_ENSG00000169688.11	novel	396	3	NA	NA	67	-136	multi-exon	FALSE	canonical	0	0	junction_2	2	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGAGCCCTGCTCCCAG	65	False	NA	NA	False	NA	NA	NA	56638732	56653068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr16_+_56638767_56639263_56639330_56652973
transcript_53344.nnic	chr16	+	375	2	NIC	ENSG00000205362.11	novel	396	3	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTCTGGTTTTCTTT	2893	False	NA	NA	False	AATAAA	-15	NA	56638620	56640087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_56638767_56639858
transcript_53349.known	chr16	+	425	3	FSM	ENSG00000198417.7	ENST00000334350.7	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	6	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTCAGTTTCCCTT	-1	True	NA	9	True	ATTAAA	-15	NA	56657958	56659303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56658087_56658674_56658741_56659072
transcript_53350.known	chr16	+	416	3	FSM	ENSG00000198417.7	ENST00000568475.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	67	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTCAGTTTCCCTTAT	3	True	NA	11	True	ATTAAA	-17	NA	56658011	56659305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56658087_56658674_56658783_56659072
transcript_53356.known	chr16	-	305	2	FSM	ENSG00000125144.14	ENST00000569500.5	305	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	29	False	NA	-5	True	ATTAAA	-14	NA	56668034	56666734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56666971_56667965
transcript_53357.known	chr16	-	406	3	FSM	ENSG00000125144.14	ENST00000444837.6	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	102	4823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGGTTCCTGTTGTGT	-2	True	NA	-1	True	ATTAAA	-18	NA	56668065	56666730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56666971_56667311_56667378_56667965
transcript_53366.known	chr16	+	397	3	FSM	ENSG00000205358.4	ENST00000332374.5	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	5	3847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	7	True	NA	14	True	ATTAAA	-14	NA	56669813	56671129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56669913_56670505_56670572_56670897
transcript_53367.known	chr16	+	697	2	FSM	ENSG00000205358.4	ENST00000569155.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	4	True	NA	14	True	ATTAAA	-14	NA	56669839	56671129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56669913_56670505
transcript_53368.known	chr16	+	242	3	FSM	ENSG00000275691.2	ENST00000379816.5	242	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTAGAAAGTGTACAAA	5076	False	NA	NA	False	NA	NA	NA	56676131	56677763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56676218_56677070_56677115_56677651
transcript_5337.known	chr1	+	1229	3	FSM	ENSG00000116157.6	ENST00000361314.5	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	2.5	586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATAGTCTCCCTCCC	-11	True	NA	11	True	AATAAA	-20	NA	52602370	52609051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52602548_52606683_52606946_52608261
transcript_53371.nnic	chr16	+	398	2	NNC	ENSG00000275691.2	novel	242	3	NA	NA	-271	100	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACTTTATTCTGGCTCA	4805	False	NA	NA	False	AATAAA	-21	NA	56675860	56677863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_56676047_56677651
transcript_53377.known	chr16	+	1727	1	FSM	ENSG00000187193.9	ENST00000568370.1	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	0	True	NA	6	True	AATAAA	-14	NA	56682469	56684196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56682500_56684200
transcript_53378.known	chr16	+	404	3	FSM	ENSG00000187193.9	ENST00000394485.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_2	54	4824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	0	True	NA	6	True	AATAAA	-14	NA	56682469	56684196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56682569_56683164_56683231_56683957
transcript_53379.known	chr16	+	549	3	FSM	ENSG00000187193.9	ENST00000564974.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	551.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	11	False	NA	6	True	AATAAA	-14	NA	56682480	56684196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56682569_56683164_56683387_56683957
transcript_53384.known	chr16	+	442	4	FSM	ENSG00000102900.13	ENST00000566678.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_1	33.3099918276117	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTACTTGACTAGT	133	False	NA	7	True	AATAAA	-18	NA	56748348	56805686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56748427_56758537_56758656_56798475_56798539_56805503
transcript_53385.known	chr16	+	458	2	FSM	ENSG00000102900.13	ENST00000563465.1	458	2	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTTTTCAACATTCTT	2380	False	NA	14	True	AATAAA	-14	NA	56841640	56844763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56841834_56844498
transcript_53386.known	chr16	+	1862	8	FSM	ENSG00000051108.15	ENST00000300302.9	1862	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	107.822227082644	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	2	True	NA	29	True	AATAAA	-22	NA	56932146	56943881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_53390.known	chr16	+	798	6	FSM	ENSG00000051108.15	ENST00000565966.5	798	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	137.357052967804	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCCTGGAGCCAATCAAA	2	True	NA	NA	False	NA	NA	NA	56932146	56940047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935241_56935313_56935400_56935476_56936686_56936818_56939236_56939360_56939894
transcript_53391.known	chr16	+	1388	6	FSM	ENSG00000051108.15	ENST00000344114.8	1388	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.032325188638	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	2	True	NA	29	True	AATAAA	-22	NA	56932146	56943881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56942131_56942238_56943125
transcript_53392.known	chr16	+	1125	4	FSM	ENSG00000051108.15	ENST00000569569.5	1125	4	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	13.9283882771841	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCCCCTTTTTCTAGTA	2	True	NA	NA	False	NA	NA	NA	56932146	56937413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56935400_56935476_56936686
transcript_53394.known	chr16	+	1782	7	FSM	ENSG00000051108.15	ENST00000379792.6	1782	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	123.199927849907	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGTCATCCTAGCAG	15	False	NA	34	True	AATAAA	-27	NA	56932159	56943886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_53410.known	chr16	-	1055	8	FSM	ENSG00000172775.17	ENST00000564108.5	1055	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	384.604753385252	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACAGGGAGCTCCTCCC	1	True	NA	NA	False	NA	NA	NA	57186032	57154278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57175538_57175591_57185820
transcript_5343.nnic	chr1	+	715	4	NNC	ENSG00000182183.15	novel	924	3	NA	NA	-334	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.49691252107735	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTGGAGTCTCTTC	753	False	NA	4	True	AATAAA	-14	NA	52632833	52657065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_52633040_52639974_52640068_52642862_52643003_52656789
transcript_53434.known	chr16	-	1086	7	FSM	ENSG00000172775.17	ENST00000567439.5	1086	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	367.845717960971	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTGCATCCTGTGT	-7	True	NA	-81	True	NA	NA	NA	57186040	57154199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57185824
transcript_53436.nic	chr16	-	1690	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-67	203	intron_retention	FALSE	canonical	0	0	junction_3	343.115829163013	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAGAGAAACAAACGTAG	155	False	NA	41	True	AATAAA	-23	NA	57186183	57153532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_53440.nic	chr16	-	1487	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-67	0	intron_retention	FALSE	canonical	0	0	junction_3	343.115829163013	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGGGGGTGTCACTTC	155	False	NA	-29	True	AGTAAA	-15	NA	57186183	57153735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_53447.nic	chr16	-	1088	7	NIC	ENSG00000172775.17	novel	2823	7	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	343.115829163013	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTGTGGCCCGAATCG	155	False	NA	-16	True	NA	NA	NA	57186183	57154134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_53451.known	chr16	-	477	2	FSM	ENSG00000172775.17	ENST00000565353.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTATTCAGTAAGTAT	376	False	NA	NA	False	NA	NA	NA	57185962	57178513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57178853_57185824
transcript_53452.known	chr16	-	981	7	FSM	ENSG00000172775.17	ENST00000569266.5	981	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	363.178407336609	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGAATCCACCTGTG	7781	False	NA	-26	True	NA	NA	NA	57178557	57154144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57178501
transcript_53453.known	chr16	-	597	6	FSM	ENSG00000172775.17	ENST00000562324.5	597	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	349.715655926354	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTGTGAAAAGACTGAAA	222	False	NA	NA	False	NA	NA	NA	57186116	57164051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57186030
transcript_53455.nic	chr16	+	2122	15	NIC	ENSG00000159579.14	novel	3503	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	72.9309150316033	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	114	False	NA	NA	False	AAAAAG	-8	NA	57186264	57239046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_57186430_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_53457.nic	chr16	+	2473	15	NIC	ENSG00000159579.14	novel	3586	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	61.0324436973768	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	119	False	NA	NA	False	AAAAAG	-8	NA	57186269	57239046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_53458.known	chr16	+	3586	15	FSM	ENSG00000159579.14	ENST00000537866.5	3586	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	71.7639625893847	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATGAATTATTGACTA	9	True	NA	23	True	AATAAA	-20	NA	57186332	57239957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57187051_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_53459.known	chr16	+	1241	2	FSM	ENSG00000159579.14	ENST00000566352.1	1241	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAGTAAATATGGAGTG	-13	True	NA	NA	False	GATAAA	-20	NA	57186310	57205269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57186786_57204503
transcript_5346.nnic	chr1	+	644	3	NNC	ENSG00000182183.15	novel	924	3	NA	NA	-356	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	1	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTGGAGTCTCTTC	731	False	NA	4	True	AATAAA	-14	NA	52632811	52657065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_52633040_52642862_52643003_52656789
transcript_53460.known	chr16	+	3503	15	FSM	ENSG00000159579.14	ENST00000394420.9	3503	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	40.6687088257178	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	5	True	NA	36	True	AATAAA	-21	NA	57186328	57240469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57186452_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_53462.known	chr16	+	1969	6	FSM	ENSG00000102931.8	ENST00000219204.8	1969	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	16.2185079461706	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTTTCTTTA	13	True	NA	44	True	AGTAAA	-35	NA	57245258	57253635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57245406_57246079_57246142_57248536_57248644_57249766_57249853_57250410_57250508_57252165
transcript_53465.nnic	chr16	-	1438	3	NNC	ENSG00000102934.10	novel	1497	4	NA	NA	2860	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGACAAGATGTTGGCAA	1535	False	NA	-10	True	AATAAA	-21	NA	57260511	57256096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_57257030_57258461_57258585_57260129
transcript_5347.known	chr1	+	924	3	FSM	ENSG00000182183.15	ENST00000517870.2	924	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTGGAGTCTCTTC	-1	True	NA	4	True	AATAAA	-14	NA	52633167	52657065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52633676_52642862_52643003_52656789
transcript_53483.known	chr16	-	2021	9	FSM	ENSG00000005194.15	ENST00000394391.9	2021	9	0	0	0	0	multi-exon	FALSE	canonical	3	932	junction_2	116.953984006531	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	8	True	NA	-18	True	AATAAA	-15	NA	57447385	57428186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_53484.known	chr16	-	2016	9	FSM	ENSG00000005194.15	ENST00000567518.5	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	321.627016122713	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	NA	False	NA	-18	True	AATAAA	-15	NA	57447419	57428186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57440771_57440984_57447341
transcript_53487.known	chr16	+	1630	9	FSM	ENSG00000088682.14	ENST00000262507.11	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_5	25.5119457313628	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	-11	True	NA	16	True	AATAAA	-17	NA	57447478	57461270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_53490.known	chr16	+	1482	8	FSM	ENSG00000088682.14	ENST00000567072.5	1482	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.7300647563773	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATAAATATGTTTG	4	True	NA	-12	True	NA	NA	NA	57447493	57461242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456627_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_53495.known	chr16	-	1848	8	FSM	ENSG00000125170.11	ENST00000569548.5	1848	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	13.1086511393765	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAACAGCAGGTGGCTTC	6609	False	NA	NA	False	NA	NA	NA	57479874	57472876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_5350.known	chr1	-	908	3	FSM	ENSG00000162377.6	ENST00000486918.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	135.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAGCCTACAATGTTT	276	False	NA	-55	True	NA	NA	NA	52698068	52687561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52688169_52692726_52692868_52697908
transcript_53503.known	chr16	-	2851	7	FSM	ENSG00000125170.11	ENST00000566936.5	2851	7	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	10.6562449087639	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATCTCTGGTTTTCTCC	6678	False	NA	-5	True	AATAAA	-19	NA	57479805	57471921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_53507.known	chr16	+	882	6	FSM	ENSG00000088682.14	ENST00000567933.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	83.6946832242049	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATTGAAAAATGAGATG	7	True	NA	NA	False	NA	NA	NA	57447496	57460873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57459564_57459721_57460050_57460105_57460588
transcript_53509.known	chr16	+	1764	9	FSM	ENSG00000102978.13	ENST00000219252.10	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_5	36.3797247790579	3078	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	10	True	NA	28	True	AATAAA	-18	NA	57462678	57472009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57462811_57463028_57463079_57465952_57466022_57466174_57466228_57469164_57469294_57469709_57469762_57469960_57470130_57470279_57470355_57470974
transcript_53510.known	chr16	+	1118	4	FSM	ENSG00000088682.14	ENST00000569980.1	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	25.8370965001015	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	NA	False	NA	16	True	AATAAA	-17	NA	57458124	57461270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57458351_57459564_57459721_57460050_57460105_57460588
transcript_53518.nic	chr16	+	2708	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-8	0	intron_retention	FALSE	canonical	0	0	junction_16	83.2038513917871	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	-26	True	NA	13	True	ATTAAA	-13	NA	57735730	57757244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755789_57755918_57755991_57756067_57756355_57756473_57756813
transcript_53519.known	chr16	+	2618	20	FSM	ENSG00000140854.13	ENST00000379661.8	2618	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.2038513917871	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	13	True	NA	13	True	ATTAAA	-13	NA	57735769	57757244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_53521.nic	chr16	+	2801	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_16	93.6534544428868	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	31	False	NA	13	True	ATTAAA	-13	NA	57735847	57757244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_57736117_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_5353.known	chr1	-	3988	3	FSM	ENSG00000162377.6	ENST00000371538.5	3988	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	19.5	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTGCCTCATATCCCA	-3	True	NA	-15	True	ATTAAA	-8	NA	52698347	52684448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52688169_52692726_52692868_52698220
transcript_53532.known	chr16	+	718	2	FSM	ENSG00000187185.4	ENST00000568697.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACCTTCTAAGAGGA	6480	False	NA	NA	False	NA	NA	NA	57798264	57807952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57798633_57807602
transcript_53534.nic	chr16	-	813	2	ISM	ENSG00000070729.14	ENST00000311183.8	1633	13	13657	0	9893	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGATTGCATTGATATT	NA	False	NA	3	True	ATTAAA	-24	NA	57957459	57954674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_57955369_57957340
transcript_53535.nic	chr16	+	421	4	ISM	ENSG00000159648.13	ENST00000441824.4	1434	8	8577	545	-60	0	3prime_fragment	FALSE	canonical	3	25	junction_1	6.54896090146283	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAATTGTCTCTGTCTGTG	8574	False	NA	8	True	AATAAA	-24	NA	57985120	57987571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_57985268_57985481_57985547_57985908_57985942_57987395
transcript_53551.known	chr16	+	2248	7	FSM	ENSG00000103005.12	ENST00000219281.8	2248	7	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_5	40.297504747675	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGGACTACTTGTA	-22	True	NA	20	True	AATAAA	-22	NA	58001406	58021618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140
transcript_53556.known	chr16	+	1212	6	FSM	ENSG00000103005.12	ENST00000539737.6	1212	6	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_3	262.670439905217	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCTCTCTTCCTCTCC	-24	True	NA	NA	False	NA	NA	NA	58001404	58020634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58017333_58017440_58018971_58019056_58020140
transcript_53559.known	chr16	+	1217	4	FSM	ENSG00000103005.12	ENST00000423271.7	1217	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	329.709973562625	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCATTTCACTCACCCT	-22	True	NA	NA	False	NA	NA	NA	58001406	58011708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58011017
transcript_53560.known	chr16	+	1751	4	FSM	ENSG00000103005.12	ENST00000563149.1	1751	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_3	329.238852844287	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	-9	True	NA	7	True	AATAAA	-27	NA	58001419	58013558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58012320
transcript_53562.known	chr16	+	573	4	FSM	ENSG00000103005.12	ENST00000569252.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	336.586789204013	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAGAGAAAACCAGGTGG	-13	True	NA	NA	False	NA	NA	NA	58001415	58014310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58001582_58002478_58002664_58009928_58010113_58014272
transcript_53566.known	chr16	+	4062	10	FSM	ENSG00000102996.5	ENST00000219271.4	4062	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	31.6333157709821	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTGTTTGTAAGGC	-35	True	NA	23	True	AATAAA	-17	NA	58025753	58046901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58026513_58037471_58037621_58038265_58038395_58039874_58040183_58040536_58040699_58041616_58041871_58042230_58042370_58043209_58043361_58043511_58043628_58045006
transcript_53568.known	chr16	-	1281	6	FSM	ENSG00000070761.8	ENST00000262498.8	1281	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	31.2512399753994	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCCTAGTTTGTCTTT	-8	True	NA	-3	True	AATAAA	-24	NA	58129381	58113591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58114031_58114809_58114921_58115268_58115458_58116040_58116153_58116871_58116952_58129031
transcript_53569.known	chr16	-	1605	5	FSM	ENSG00000070761.8	ENST00000562622.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	20.6639783197718	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTGTAAATTTGTT	2	True	NA	-17	True	AATAAA	-10	NA	58129371	58113605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58114031_58114809_58115458_58116040_58116153_58116871_58116952_58129031
transcript_5357.known	chr1	+	8143	14	FSM	ENSG00000162378.13	ENST00000294353.7	8143	14	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	14.4148181482987	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAAGTGTGTCTTGTCTA	-8	True	NA	14	True	AATAAA	-15	NA	52726452	52827336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52726684_52756457_52756624_52771019_52771775_52779852_52779994_52784876_52785054_52790002_52790068_52796291_52796392_52796733_52796785_52801818_52801981_52802091_52802140_52813535_52813734_52813859_52813913_52816531_52816630_52821438
transcript_53570.known	chr16	+	4165	3	FSM	ENSG00000260927.2	ENST00000656934.1	4165	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGAGTTGCTTGAGTT	683	False	NA	NA	False	NA	NA	NA	58129566	58162881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58129664_58137950_58138051_58158913
transcript_53572.known	chr16	+	1743	4	FSM	ENSG00000260927.2	ENST00000660742.1	1743	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTAACCAGGCTCTCTT	728	False	NA	NA	False	ATTAAA	-5	NA	58129611	58160411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58129664_58137950_58138051_58138416_58138510_58158913
transcript_53575.known	chr16	+	5272	9	FSM	ENSG00000103021.10	ENST00000219299.8	5272	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	11.0049704679295	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	-27	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_53578.known	chr16	+	891	8	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	-11	5009	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	27.7885602655599	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAATTGAAAAAGAAA	14	True	NA	NA	False	AATATA	-43	NA	58249976	58267549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259869_58259869_58259935_58262384_58262541_58267478
transcript_53579.nnic	chr16	+	1340	8	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	-8	-6323	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	24.9391095204594	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTACTCACGAAATTGAA	-35	True	NA	NA	False	AATAAA	-15	NA	58249927	58277513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58277151
transcript_53580.nnic	chr16	+	1952	8	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	-8	-5711	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	24.9391095204594	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGTCTGATCAAAGTATA	-35	True	NA	NA	False	ATTAAA	-18	NA	58249927	58278125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58277151
transcript_53582.known	chr16	+	5110	8	FSM	ENSG00000103021.10	ENST00000443128.6	5110	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	26.4729357369109	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	-27	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58250116_58252726_58252854_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_53585.nnic	chr16	+	899	6	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	-8	-2119	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	32.8536147174097	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGTTTGTGGTGATTTGT	-35	True	NA	NA	False	AATAAA	-16	NA	58249927	58260421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58260236
transcript_53587.known	chr16	+	2200	3	FSM	ENSG00000181938.14	ENST00000318129.6	2200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTTGTGTGGTA	-20	True	NA	19	True	AATACA	-22	NA	58392470	58406147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58392788_58403097_58403332_58404498
transcript_53589.known	chr16	+	1932	2	FSM	ENSG00000181938.14	ENST00000328514.11	1932	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCTGTACAAGTGC	-2	True	NA	18	True	AATAAA	-19	NA	58392393	58406036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58392788_58404498
transcript_5359.nnic	chr1	+	997	2	Genic_Genomic	ENSG00000230953.2	novel	175	1	NA	NA	-148290	160	multi-exon	FALSE	canonical	0	0	junction_1	0	40392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCAATACAACGAAATGT	NA	False	NA	NA	False	AATAAA	-21	NA	52772131	52920756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_52772678_52920305
transcript_53591.known	chr16	-	655	1	FSM	ENSG00000276131.1	ENST00000613275.1	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAAGTCCGACCCTTTC	NA	False	NA	-11	True	AATAAA	-24	NA	58392807	58392152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58392200_58392800
transcript_53593.known	chr16	+	3324	16	FSM	ENSG00000103034.15	ENST00000258187.9	3324	16	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	25.0105755409365	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTCATTTCTCCCCTG	-8	True	NA	24	True	ATTAAA	-25	NA	58463664	58513628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58463798_58487755_58487851_58494963_58495009_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_53594.known	chr16	+	3265	14	FSM	ENSG00000103034.15	ENST00000566192.5	3265	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	42.3346767091826	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	NA	False	NA	15	True	ATTAAA	-16	NA	58500046	58513619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58500270_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_53598.known	chr16	+	560	5	FSM	ENSG00000103034.15	ENST00000566585.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	58.2296101652759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGAGGAAGTGTCCCTG	1	True	NA	NA	False	NA	NA	NA	58500144	58504733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58500270_58503797_58503904_58504153_58504275_58504358_58504422_58504588
transcript_53605.nic	chr16	-	408	3	ISM	ENSG00000125107.19	ENST00000568158.1	496	4	-22	23880	1	-28	5prime_fragment	FALSE	canonical	3	15	junction_1	21	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAAGTAATTATTTGAA	-5	True	NA	NA	False	AATAAA	-12	NA	58629837	58623253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_58623410_58624652_58624795_58629727
transcript_53606.known	chr16	-	304	2	FSM	ENSG00000125107.19	ENST00000569263.1	304	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGGAAGTATTTTCT	42	False	58629857	NA	False	AATAAA	-40	NA	58629847	58623225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58623410_58629727
transcript_53607.known	chr16	-	4999	31	FSM	ENSG00000125107.19	ENST00000441024.6	4999	31	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_12	76.9448287194576	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATCTGACAATCTCA	-6	True	NA	NA	False	AATAAA	-20	NA	58629838	58543326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556846_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
transcript_53608.known	chr16	-	582	4	FSM	ENSG00000125107.19	ENST00000564557.1	582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	306.120165222018	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCAAAGATTTCCATC	7	True	NA	NA	False	NA	NA	NA	58629825	58588820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58588907_58599235_58599512_58624672_58624795_58629727
transcript_5361.nnic	chr1	-	1016	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	-148114	55	multi-exon	FALSE	canonical	0	0	junction_1	0	38161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAAAAAACCATAT	6411	False	NA	NA	False	AATAAA	-30	NA	52920762	52772138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_52772740_52920347
transcript_53614.known	chr16	-	4058	12	FSM	ENSG00000103042.9	ENST00000219320.9	4058	12	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_11	32.0930980453549	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTCCCCTGTGTCTGA	-11	True	NA	-6	True	AATAAA	-19	NA	58684770	58665108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58667488_58670112_58670168_58671044_58671245_58672095_58672244_58675939_58676055_58676288_58676347_58677325_58677425_58678332_58678475_58678695_58678895_58679856_58680242_58683954_58684179_58684716
transcript_53617.known	chr16	-	562	2	FSM	ENSG00000103042.9	ENST00000567930.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGAACCTTGAGAACAC	2	True	NA	NA	False	NA	NA	NA	58684323	58681515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58681709_58683954
transcript_5362.nnic	chr1	-	984	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	-148114	55	multi-exon	FALSE	canonical	0	0	junction_1	0	38164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAAAAAACCATAT	6411	False	NA	NA	False	AATAAA	-30	NA	52920762	52772138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_52772740_52920379
transcript_53621.known	chr16	-	2421	10	FSM	ENSG00000125166.13	ENST00000245206.10	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_8	58.0748771675386	7459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTACTAAGTTATC	0	True	NA	-15	True	AATAAA	-17	NA	58734316	58707130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
transcript_53624.known	chr16	-	1615	9	FSM	ENSG00000125166.13	ENST00000434819.2	1615	9	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_7	387.736057131652	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACACGTTAGAGGCT	-10	True	NA	NA	False	NA	NA	NA	58734326	58707817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58723745_58723903_58734139
transcript_5363.nnic	chr1	-	997	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	-148114	55	multi-exon	FALSE	canonical	0	0	junction_1	0	38162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAAAAAACCATAT	6411	False	NA	NA	False	AATAAA	-30	NA	52920762	52772138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_52772753_52920379
transcript_53633.known	chr16	-	987	3	FSM	ENSG00000125166.13	ENST00000492378.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_1	53	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTAGTAGTAATCCTGA	-19	True	NA	NA	False	AATAAA	-29	NA	58734335	58721644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58722279_58723745_58723903_58734139
transcript_53638.known	chr16	-	566	1	FSM	ENSG00000224631.4	ENST00000591758.1	566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	148654	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGCTATCAACCT	NA	False	NA	NA	False	AATAAA	-30	NA	61055964	61055398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_61055400_61056000
transcript_53639.known	chr16	-	470	1	FSM	ENSG00000224631.4	ENST00000492222.1	470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATGAGTTAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	61055914	61055444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_61055400_61055900
transcript_5364.nnic	chr1	-	1006	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	-148114	55	multi-exon	FALSE	canonical	0	0	junction_1	0	38168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAAAAAACCATAT	6411	False	NA	NA	False	AATAAA	-30	NA	52920762	52772138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_52772762_52920379
transcript_53641.known	chr16	-	3986	9	FSM	ENSG00000150394.14	ENST00000584337.5	3986	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.1514304763539	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTTCTCTGAAGAAA	1	True	NA	NA	False	AATAAA	-43	NA	62036402	61725165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_61727216_61789345_61789483_61817478_61817733_61820925_61821114_61825011_61825180_61857118_61857239_61901178_61901474_62021151_62021603_62036079
transcript_53648.nnic	chr16	+	1288	3	Antisense	novelGene_ENSG00000150394.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGCAGGTGCTCTGAGT	NA	False	NA	6	True	AATAAA	-20	NA	61872621	61882905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_61873058_61875265_61875606_61882393
transcript_5365.known	chr1	-	455	1	FSM	ENSG00000228929.1	ENST00000437890.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5543	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGTGTACTCAAGC	27	False	NA	NA	False	NA	NA	NA	52772648	52772193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52772200_52772600
transcript_53654.nic	chr16	-	1154	3	ISM	ENSG00000150394.14	ENST00000584337.5	3986	9	-36	175964	0	0	5prime_fragment	FALSE	canonical	0	0	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCTGGCATCAAGGATG	-8	True	NA	NA	False	ATTAAA	-16	NA	62036438	61901129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_61901474_62021151_62021603_62036079
transcript_53657.nnic	chr16	+	637	2	Antisense	novelGene_ENSG00000150394.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTGCAGGTGCTCTGAG	NA	False	NA	5	True	AATAAA	-19	NA	61872931	61882904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_61873058_61882393
transcript_53660.nnic	chr16	+	454	2	Antisense	novelGene_ENSG00000150394.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTTACCTTAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	62036552	62037441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_62036778_62037212
transcript_53662.known	chr16	-	539	2	FSM	ENSG00000150394.14	ENST00000577228.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTAACTGGAGATATC	NA	False	NA	NA	False	NA	NA	NA	61918714	61901391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_61901474_61918257
transcript_53665.known	chr16	-	554	2	FSM	ENSG00000260668.1	ENST00000569153.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAACTGTCAAAACCATAA	NA	False	NA	NA	False	AAAAAG	-6	NA	64261239	64260569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_64261020_64261135
transcript_53675.nnic	chr16	-	647	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-132	5	at_least_one_novel_splicesite	FALSE	canonical	3	261	junction_2	242	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235065	65229840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_65230206_65233014_65233117_65234885
transcript_53677.nnic	chr16	-	690	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-118	5	at_least_one_novel_splicesite	FALSE	canonical	3	122	junction_2	311.5	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235051	65229840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_65230206_65233014_65233174_65234885
transcript_53679.nnic	chr16	-	777	3	FSM	ENSG00000260834.2	ENST00000691011.1	696	3	-76	-5	-76	5	multi-exon	FALSE	canonical	3	159	junction_2	293	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235009	65229840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_65230206_65233014_65233303_65234885
transcript_53687.nnic	chr16	-	525	3	NIC	ENSG00000260834.2	novel	146	2	NA	NA	-72	-10	combination_of_known_splicesites	FALSE	canonical	3	159	junction_2	22.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	NA	False	NA	-29	True	AATAAA	-17	NA	65235005	65227904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_65228022_65233014_65233303_65234885
transcript_53689.nnic	chr16	-	600	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-85	5	at_least_one_novel_splicesite	FALSE	canonical	3	261	junction_2	242	557	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235018	65229840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_65230206_65233014_65233117_65234885
transcript_53695.known	chr16	-	146	2	FSM	ENSG00000260834.2	ENST00000565901.1	146	2	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACACATGTGTACAGCA	8	True	NA	-19	True	AATAAA	-27	NA	65234904	65227894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_65228022_65234885
transcript_53699.nnic	chr16	+	1457	3	NNC	ENSG00000260364.1	novel	781	5	NA	NA	78	890	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTCTCTTATGTCTTTA	NA	False	NA	NA	False	ATTAAA	-21	NA	65233133	65433710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_65233404_65371096_65371186_65432612
transcript_53704.known	chr16	-	2745	9	FSM	ENSG00000166548.17	ENST00000527800.6	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	3.39116499156263	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCCTGAAGCTTTGGA	9	True	NA	-10	True	AATAAA	-16	NA	66549856	66510743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977
transcript_53707.known	chr16	+	656	4	FSM	ENSG00000217555.13	ENST00000264001.9	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	77.5112895003044	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	-36	True	NA	21	True	ATTAAA	-21	NA	66552575	66566068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66558189_66558349_66563121_66563218_66565885
transcript_53708.known	chr16	+	678	4	FSM	ENSG00000254788.7	ENST00000616804.5	678	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	98.0555398174366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCTTCCTCTCGTTGC	67	False	NA	NA	False	CATAAA	-27	NA	66552678	66579135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66558189_66558349_66577103_66577203_66578830
transcript_53710.known	chr16	+	508	3	FSM	ENSG00000217555.13	ENST00000351137.8	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	42.5	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66563121_66563218_66565885
transcript_53711.known	chr16	+	585	3	FSM	ENSG00000254788.7	ENST00000527729.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCTTCCTCTCGTTGC	1	True	NA	NA	False	CATAAA	-27	NA	66552612	66579135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66577103_66577203_66578830
transcript_53712.known	chr16	+	571	3	FSM	ENSG00000217555.13	ENST00000345436.8	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	50	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66558189_66558349_66565885
transcript_53714.known	chr16	+	564	2	FSM	ENSG00000217555.13	ENST00000526149.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGAGCATAAGTTCT	-39	True	NA	NA	False	NA	NA	NA	66552572	66558532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66558189
transcript_53715.known	chr16	+	412	2	FSM	ENSG00000217555.13	ENST00000362093.4	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	-43	True	NA	25	True	ATTAAA	-25	NA	66552568	66566072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66565885
transcript_53717.known	chr16	-	4326	13	FSM	ENSG00000135720.13	ENST00000258198.7	4326	13	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_6	34.9221356098901	2531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGGCTTTCTTTAT	1	True	NA	-3	True	AATAAA	-23	NA	66751609	66720892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_53718.known	chr16	-	1502	12	FSM	ENSG00000135720.13	ENST00000443351.6	1502	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	87.0948945757271	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCACATCTGGGCTTC	9	True	NA	NA	False	NA	NA	NA	66751601	66723477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66749196_66749314_66751272_66751347_66751484
transcript_53730.known	chr16	-	1909	21	FSM	ENSG00000159593.15	ENST00000379463.6	1909	21	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_20	406.688136045299	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTAGTCTTGTTCTT	-33	True	NA	NA	False	AATAAA	-17	NA	66830976	66802879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66827979_66828078_66830846
transcript_53736.known	chr16	-	1654	19	FSM	ENSG00000159593.15	ENST00000394074.6	1654	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_18	320.845622660255	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTCTTAATAAACATT	-12	True	NA	NA	False	NA	NA	NA	66830955	66802911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
transcript_53753.known	chr16	-	1460	8	FSM	ENSG00000159593.15	ENST00000567743.5	1460	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	479.568811431643	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAACACAGCACT	-25	True	NA	NA	False	AATGAA	-43	NA	66830968	66816613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
transcript_53757.known	chr16	-	1813	20	FSM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	0	0	0	multi-exon	FALSE	canonical	3	1311	junction_19	83.7365939987723	5444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-33	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_53758.known	chr16	+	574	3	FSM	ENSG00000172840.7	ENST00000561704.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGTGTTGCGGTTTGAG	-40	True	NA	NA	False	NA	NA	NA	66880518	66884594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66880641_66883014_66883103_66884230
transcript_53761.known	chr16	+	6997	2	FSM	ENSG00000172840.7	ENST00000311765.4	6997	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTAGTTTCTTTTGG	-44	True	NA	0	True	ATTAAA	-24	NA	66880514	66891101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66880641_66884230
transcript_53767.known	chr16	-	668	5	FSM	ENSG00000166595.12	ENST00000422424.7	668	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	492.605509002894	9859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCAGCATGCCTTGGTG	-8	True	NA	-13	True	AATAAA	-16	NA	66934402	66932064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_53768.known	chr16	-	696	6	FSM	ENSG00000166595.12	ENST00000567511.1	696	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	571.523087897593	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCCCAGCATGCCTTGG	3821	False	NA	-15	True	AATAAA	-14	NA	66934362	66932066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66932301_66932480_66932551_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_53769.known	chr16	-	718	4	FSM	ENSG00000166595.12	ENST00000563490.1	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_1	51.2315007262784	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCATACTGGTATC	3766	False	66934428	-134	True	NA	NA	NA	66934417	66932185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986
transcript_53770.known	chr16	+	3858	13	FSM	ENSG00000172828.13	ENST00000303334.9	3858	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.53432938662683	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGGTCCACACTGCC	4	True	NA	24	True	AATAAA	-16	NA	66961265	66975149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66961390_66963178_66963384_66963490_66963630_66963801_66963936_66964356_66964511_66964622_66964728_66966243_66966346_66966724_66966866_66969678_66969760_66971171_66971320_66972355_66972506_66972667_66972747_66972853
transcript_53771.known	chr16	+	3868	12	FSM	ENSG00000172831.14	ENST00000417689.6	3868	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	35.0916156311348	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAAAATAAATTCT	-26	True	NA	-10	True	NA	NA	NA	66934443	66945069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942738_66943298_66943372_66943838
transcript_53772.known	chr16	+	2871	12	FSM	ENSG00000172831.14	ENST00000317091.10	2871	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	20.1100279249059	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTCTGCCTCTCCCC	-7	True	NA	17	True	AATAAA	-18	NA	66935515	66945096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_53777.known	chr16	+	3391	12	FSM	ENSG00000172831.14	ENST00000568470.6	3391	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	30.057520613892	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	1	True	NA	NA	False	NA	NA	NA	66934470	66944306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66935977_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_53781.known	chr16	+	584	6	FSM	ENSG00000067955.15	ENST00000561924.6	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	256.669904741479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACACATTGCTTCTAG	12	False	NA	-46	True	NA	NA	NA	67029115	67098811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_53784.known	chr16	+	3103	6	FSM	ENSG00000067955.15	ENST00000412916.7	3103	6	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	142.009295470402	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	-11	True	NA	105	True	AATAAA	-18	NA	67029148	67101058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082309_67098709
transcript_53785.known	chr16	+	3134	6	FSM	ENSG00000067955.15	ENST00000290858.11	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	125.195846576474	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	-11	True	NA	105	True	AATAAA	-18	NA	67029148	67101058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_53793.known	chr16	+	1353	17	FSM	ENSG00000125149.12	ENST00000569600.5	1353	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	35.0708546196126	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACCACCACCCATGCCC	15	True	NA	NA	False	NA	NA	NA	67109962	67147131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67109990_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_538.known	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_2	1801.78014405199	20524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
transcript_5380.known	chr1	-	1556	10	FSM	ENSG00000121310.17	ENST00000371522.9	1556	10	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_5	41.3264629893471	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	7	True	NA	0	True	AATAAA	-38	NA	52921740	52895909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52906518_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_53800.known	chr16	+	2917	16	FSM	ENSG00000125149.12	ENST00000219139.8	2917	16	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_8	14.5958898324152	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTATTGGTTTTTTG	-7	True	NA	18	True	NA	NA	NA	67109940	67148544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_53805.known	chr16	+	1394	4	FSM	ENSG00000140939.14	ENST00000268605.11	1394	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.35412613473634	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	5709	False	NA	23	True	AATATA	-30	NA	67170496	67175735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67170575_67174161_67174465_67174620_67174945_67175046
transcript_53806.known	chr16	+	1592	6	FSM	ENSG00000140939.14	ENST00000564053.5	1592	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.64269439186635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAGGGTGACTTCTCT	7	True	NA	NA	False	NA	NA	NA	67170539	67175485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67170575_67171151_67171458_67173861_67174047_67174161_67174465_67174620_67174945_67175046
transcript_53808.known	chr16	+	317	2	FSM	ENSG00000140939.14	ENST00000564860.1	317	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGGGCAGGCCCAAGCC	305	False	NA	74	True	NA	NA	NA	67174843	67175260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67174947_67175046
transcript_53809.known	chr16	+	2110	10	FSM	ENSG00000205250.9	ENST00000379378.8	2110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	308.225066076763	1130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATGTGGTTCTTTGG	-16	True	NA	21	True	AATAAA	-18	NA	67192154	67198918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67192363_67192760_67192871_67193008_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_53811.known	chr16	+	2486	20	FSM	ENSG00000102890.16	ENST00000393997.8	2486	20	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	11.6006972758244	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGCCAGCTCTGTA	-1	True	NA	9	True	AATAAA	-20	NA	67199130	67204004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67199405_67199552_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_53812.known	chr16	-	1468	7	FSM	ENSG00000125122.17	ENST00000637247.1	1468	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.44802681092953	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCCTTGTCTTAAGTTCT	9829	False	NA	NA	False	ATTAAA	-14	NA	67226818	67207139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67207505_67207598_67207774_67207872_67208091_67208311_67208456_67210047_67210323_67223825_67223928_67226629
transcript_53819.known	chr16	+	887	6	FSM	ENSG00000168701.19	ENST00000563953.5	887	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	233.559414282533	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAGAATGTGGCTG	-18	True	NA	9	True	NA	NA	NA	67227119	67229262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227718_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_5382.nic	chr1	-	1308	10	NIC	ENSG00000121310.17	novel	1676	13	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_8	45.0678500830815	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-10	True	NA	-28	True	ATTAAA	-6	NA	52921706	52896231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52913894_52914096_52921552
transcript_53826.known	chr16	+	776	6	FSM	ENSG00000168701.19	ENST00000304800.14	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_4	36.9940535762168	5888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	-8	True	NA	25	True	AATAAA	-15	NA	67227129	67229278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_53827.known	chr16	+	775	6	FSM	ENSG00000168701.19	ENST00000562235.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	232.36522975695	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	19	True	NA	25	True	AATAAA	-15	NA	67227156	67229278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228658_67228796_67228882_67228975
transcript_53828.known	chr16	+	832	5	FSM	ENSG00000168701.19	ENST00000565201.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_4	39.274673773311	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	30	True	NA	25	True	AATAAA	-15	NA	67227167	67229278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796
transcript_53829.known	chr16	+	915	5	FSM	ENSG00000168701.19	ENST00000567193.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_4	22.3983816379666	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTATACTTATACTC	NA	False	NA	-28	True	NA	NA	NA	67227102	67229225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228882_67228975
transcript_53830.nic	chr16	-	978	8	ISM	ENSG00000135723.14	ENST00000258201.9	3813	22	-58	8086	-58	-3295	5prime_fragment	FALSE	canonical	3	109	junction_3	14.6913830082085	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCCAAGGACTGGGTG	NA	False	NA	NA	False	NA	NA	NA	67247539	67237474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_53834.known	chr16	-	735	2	FSM	ENSG00000135723.14	ENST00000569085.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTTCTTTCAGGGT	6451	False	NA	1	True	AATAAA	-22	NA	67230196	67229386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67229991_67230065
transcript_53835.known	chr16	-	3813	22	FSM	ENSG00000135723.14	ENST00000258201.9	3813	22	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_11	17.5313130933057	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	2	True	NA	-1	True	AATAAA	-20	NA	67247481	67229388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231187_67231350_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_53836.known	chr16	+	4480	20	FSM	ENSG00000196155.13	ENST00000450733.5	4480	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.09354280660861	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGGGCTATCTCCAATT	53	False	NA	34	True	AATAAA	-37	NA	67279588	67289499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67280397_67280881_67281006_67281090_67281185_67281566_67281645_67281723_67281838_67282008_67282108_67282200_67282350_67282502_67282642_67282741_67282859_67284274_67284458_67284712_67285216_67285289_67285537_67286273_67286364_67286444_67286667_67286748_67286920_67286999_67287178_67287897_67288015_67288166_67288401_67288488_67288605_67288802
transcript_53837.nnic	chr16	-	640	3	NNC	ENSG00000168676.11	novel	423	2	NA	NA	-3	569	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTTTAGTTAGACTAG	-1	True	NA	NA	False	AATAAA	-15	NA	67326763	67320076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_67320361_67320588_67320886_67326704
transcript_53838.known	chr16	-	1021	4	FSM	ENSG00000159713.11	ENST00000393957.7	1021	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44948974278318	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCTGGTTGACGATGA	-3	True	NA	-1	True	AATAAA	-18	NA	67393498	67389808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67390363_67390478_67390633_67390923_67391118_67393379
transcript_53839.nnic	chr16	+	1573	5	NNC	ENSG00000176387.7	novel	540	4	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	53.0253477122027	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	792	False	NA	44	True	AATAAA	-25	NA	67430594	67437553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_67430665_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_53840.nic	chr16	+	1672	5	NIC	ENSG00000176387.7	novel	540	4	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	50.9239629251299	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	-21	True	NA	44	True	AATAAA	-25	NA	67430610	67437553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_67430780_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_53845.known	chr16	-	905	6	FSM	ENSG00000159720.13	ENST00000565835.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	236.431469986548	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAGGATGGACGAAGA	2467	False	NA	NA	False	GGGGCT	-13	NA	67481079	67438320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67480956
transcript_53846.known	chr16	-	1636	8	FSM	ENSG00000159720.13	ENST00000290949.8	1636	8	0	0	0	0	multi-exon	TRUE	canonical	3	507	junction_6	36.284026957394	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCTGTCTCGTTTAG	-4	True	NA	-5	True	AATAAA	-21	NA	67481157	67438018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
transcript_53848.known	chr16	+	696	2	FSM	ENSG00000270049.4	ENST00000602596.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCATGCCTGTAGTAG	-4	True	NA	NA	False	AATAAA	-17	NA	67481383	67484669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67481520_67484109
transcript_53850.known	chr16	+	3370	11	FSM	ENSG00000039523.20	ENST00000569733.6	3370	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	26.2571894916421	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCTGGTACACTCCTG	2891	False	NA	13	True	AATAAA	-21	NA	67541346	67546786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67541579_67541652_67541783_67541866_67543265_67543350_67543470_67544298_67544432_67544694_67544831_67544955_67545118_67545375_67545535_67545663_67545861_67545948_67546232_67546365
transcript_53851.known	chr16	-	795	2	FSM	ENSG00000276075.2	ENST00000621378.2	880	2	85	0	8	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCTGTCACTTGGGAG	1644	False	NA	NA	False	AATAAA	-18	NA	67528675	67517949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67518386_67528316
transcript_53852.known	chr16	+	3706	12	FSM	ENSG00000102974.16	ENST00000646771.1	3706	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_11	114.371079393581	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTACAGCTAATAAATC	34	True	NA	-26	True	AATAAA	-39	NA	67562588	67639138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67562725_67571147_67571265_67610823_67611614_67611950_67612122_67616744_67616879_67620696_67620818_67621441_67621592_67626554_67626716_67628369_67628553_67629397_67629534_67636689_67636852_67637693
transcript_53854.nic	chr16	+	794	3	ISM	ENSG00000102974.16	ENST00000646771.1	3706	12	82	27692	82	125	5prime_fragment	FALSE	canonical	3	443	junction_1	13.5	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACCAAAAAGAGCAAAC	64	False	NA	NA	False	AAAAAG	-35	NA	67562670	67611446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_67562725_67571147_67571265_67610823
transcript_53855.nic	chr16	+	960	3	ISM	ENSG00000102974.16	ENST00000646771.1	3706	12	82	27526	82	291	5prime_fragment	FALSE	canonical	3	443	junction_1	13.5	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAAACGAGTTTATCCAT	64	False	NA	NA	False	ATTAAA	-7	NA	67562670	67611612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_67562725_67571147_67571265_67610823
transcript_53856.known	chr16	-	798	2	FSM	ENSG00000261386.2	ENST00000605277.1	798	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCCCTGCTTTGCAG	NA	False	NA	1	True	AATAAA	-21	NA	67563958	67549213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67549348_67563294
transcript_53866.known	chr16	-	1858	9	FSM	ENSG00000102977.17	ENST00000602860.5	1858	9	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	40.8516753022443	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTTTTTAATAAAATAAT	10	True	NA	-56	True	NA	NA	NA	67660281	67657562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659614_67659701_67659796_67659902_67660046_67660121
transcript_53867.known	chr16	-	1408	12	FSM	ENSG00000102977.17	ENST00000602320.1	1408	12	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_2	155.449973351159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCATGCGGCAGGAGAG	13	True	NA	-39	True	AATAAA	-3	NA	67660239	67657545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67657685_67657761_67657815_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660037_67660121
transcript_53868.known	chr16	+	1244	3	FSM	ENSG00000102981.10	ENST00000458121.7	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	37.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGTCCTTGTGTGTCC	-9	True	NA	12	True	ATTAAA	-18	NA	67660959	67662774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67661102_67661454_67661678_67661895
transcript_53869.nnic	chr16	+	1232	3	NNC	ENSG00000102981.10	novel	1244	3	NA	NA	45	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	74	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGTCCTTGTGTGTCC	36	False	NA	12	True	ATTAAA	-18	NA	67661004	67662774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_67661102_67661454_67661711_67661895
transcript_53871.known	chr16	+	1281	2	FSM	ENSG00000102981.10	ENST00000602727.1	1281	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCAGCCTGGGGAA	180	False	NA	-32	True	NA	NA	NA	67661231	67662730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67661678_67661895
transcript_53873.known	chr16	-	1565	7	FSM	ENSG00000124074.12	ENST00000243878.9	1565	7	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_5	14.4308696896618	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCCATAAGAGCTTT	-24	True	NA	0	True	ATTAAA	-17	NA	67666750	67662944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936_67664063_67664995_67665169_67666070_67666266_67666357
transcript_53882.known	chr16	+	677	4	FSM	ENSG00000159761.15	ENST00000602365.1	677	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.3061758225833	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCGCTGTACCAGTACG	69	False	NA	NA	False	NA	NA	NA	67666889	67668215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67667073_67667295_67667526_67667877_67668099_67668172
transcript_53883.known	chr16	+	1266	4	FSM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.9566858950296	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	-7	True	NA	11	True	AATAAA	-18	NA	67666813	67668755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67667073_67667295_67667526_67667877_67668099_67668199
transcript_53886.nic	chr16	+	1367	3	ISM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	intron_retention	FALSE	canonical	3	20	junction_1	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	-7	True	NA	11	True	AATAAA	-18	NA	67666813	67668755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_67667073_67667295_67667526_67667877
transcript_53887.known	chr16	+	1719	2	FSM	ENSG00000159761.15	ENST00000459925.1	1719	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	-5	True	NA	13	True	AATAAA	-20	NA	67666815	67668757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67667073_67667295
transcript_5389.known	chr1	-	1126	9	FSM	ENSG00000121310.17	ENST00000358358.9	1126	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	29.0492577357839	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCTGAGTCTTGGTAT	21	True	NA	-29	True	ATTAAA	-5	NA	52921726	52896232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_53890.known	chr16	-	2018	3	FSM	ENSG00000141098.13	ENST00000268797.12	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	7.5	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATGGCATGTGGTTTTT	18	True	NA	-7	True	AATAAA	-15	NA	67719316	67674535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67676054_67685456_67685803_67719162
transcript_53891.known	chr16	-	2029	3	FSM	ENSG00000141098.13	ENST00000602496.1	2029	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATTGAAGAGATTGAA	10	True	NA	-41	True	AATAAA	-3	NA	67719324	67680748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67681491_67684677_67685803_67719162
transcript_53892.known	chr16	-	1991	3	FSM	ENSG00000141098.13	ENST00000602377.1	1991	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	49.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATGTGGTTTTTGTTTG	-5	True	NA	-2	True	AATAAA	-20	NA	67719339	67674530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67676054_67685511_67685803_67719162
transcript_53893.known	chr16	-	5245	14	FSM	ENSG00000141084.12	ENST00000317506.8	5245	14	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	6.21888705581777	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTGTCTGGTCTCT	-7	True	NA	-3	True	ATTAAA	-18	NA	67806560	67723069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728512_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67772033_67772087_67805427_67805540_67806301
transcript_53894.known	chr16	-	2374	14	FSM	ENSG00000141084.12	ENST00000602677.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	16.8684432802267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATAGCTTATTATTTTC	-7	True	NA	NA	False	NA	NA	NA	67806560	67726030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728602_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67772033_67772087_67805427_67805540_67806301
transcript_539.known	SIRV7	-	2462	5	FSM	SIRV7A	SIRV705	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	2070	junction_2	1376.48435788424	21843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147925	1005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
transcript_53902.known	chr16	+	1119	5	FSM	ENSG00000102898.12	ENST00000569436.6	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1046.77179342013	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	-18	True	NA	28	True	AATAAA	-29	NA	67847160	67871323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_53903.known	chr16	+	1179	5	FSM	ENSG00000102898.12	ENST00000568396.2	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1127.81403608928	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	32	True	NA	28	True	AATAAA	-29	NA	67847210	67871323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67847567_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_53907.known	chr16	+	1876	1	FSM	ENSG00000168286.3	ENST00000303596.3	1876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTCTCGCCATTTTAT	11	True	NA	16	True	ATTAAA	-19	NA	67842319	67844195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67842300_67844200
transcript_53908.known	chr16	-	2133	12	FSM	ENSG00000102901.13	ENST00000565157.5	2133	12	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	52.560708701211	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	0	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_53909.known	chr16	-	2957	10	FSM	ENSG00000102901.13	ENST00000569862.5	2957	10	0	0	0	0	multi-exon	TRUE	canonical	3	366	junction_4	30.8776958137331	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-16	True	NA	0	True	AATAAA	-16	NA	67833913	67828156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832546_67833749
transcript_53910.known	chr16	-	1737	12	FSM	ENSG00000102901.13	ENST00000626059.2	1737	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	130.171088943337	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATATTCTGCATTT	1	True	NA	-8	True	AATAAA	-8	NA	67833896	67828164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832454_67832546_67833749
transcript_53911.known	chr16	+	2120	5	FSM	ENSG00000102898.12	ENST00000219169.9	2120	5	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_1	464.994892445068	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCTTTCTTCCAA	3	True	NA	14	True	AATAAA	-15	NA	67846932	67872567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_53912.known	chr16	+	589	4	FSM	ENSG00000102898.12	ENST00000568233.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	1606	junction_1	393.16860957553	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGTAGAAAGTCCTAT	5	True	NA	NA	False	AATAAA	-41	NA	67846934	67868838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500
transcript_53913.known	chr16	-	1990	11	FSM	ENSG00000102901.13	ENST00000436104.6	1990	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	160.426805740188	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	0	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67828391_67828473_67828560_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831840_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_53914.known	chr16	+	4767	29	FSM	ENSG00000038358.15	ENST00000358933.10	4767	29	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_17	42.155733505028	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTATGTGTGTGCTTTT	-36	True	NA	17	True	AATAAA	-2	NA	67873051	67884499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67873344_67875944_67876102_67876487_67876600_67876872_67876973_67877216_67877407_67877508_67877657_67877740_67877846_67878165_67878276_67878359_67878444_67878535_67878632_67878736_67878840_67878956_67879138_67879236_67879310_67879411_67879504_67879586_67879775_67879849_67879972_67880062_67880217_67880556_67880991_67881075_67881181_67881264_67881418_67881496_67881534_67881667_67881846_67881953_67882110_67882211_67882328_67882428_67882595_67882678_67882866_67882957_67883178_67883567_67883732_67883955
transcript_53915.known	chr16	+	626	3	FSM	ENSG00000188038.8	ENST00000339176.8	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	15.5	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	-8	True	NA	28	True	ATTAAA	-17	NA	67884884	67886368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67884983_67885721_67885855_67885973
transcript_53916.nnic	chr16	+	641	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	26.5	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	NA	False	NA	28	True	ATTAAA	-17	NA	67884835	67886368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_67884983_67885721_67885855_67886007
transcript_53917.nnic	chr16	+	645	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	38	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	NA	False	NA	28	True	ATTAAA	-17	NA	67884844	67886368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_67884983_67885742_67885855_67885973
transcript_53921.known	chr16	+	397	3	FSM	ENSG00000188038.8	ENST00000576758.1	397	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	30	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTTGTGTAGATTT	15	True	NA	NA	False	AATAAA	-35	NA	67884907	67888855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67884983_67885721_67885855_67888666
transcript_53922.known	chr16	-	977	8	FSM	ENSG00000205220.12	ENST00000358514.9	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	269.826853022906	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-13	True	NA	-4	True	AATAAA	-20	NA	67936850	67934505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
transcript_53925.known	chr16	+	185	2	FSM	ENSG00000159792.10	ENST00000575198.1	185	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGTTTTGCTTTG	40	False	NA	12	True	AATAAA	-17	NA	67893300	67903145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67893372_67903031
transcript_53926.known	chr16	+	3497	3	FSM	ENSG00000159792.10	ENST00000291041.6	3497	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	6.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTGGCTTCTTGCTGT	-7	True	NA	34	True	AGTAAA	-39	NA	67893253	67929676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67893372_67908679_67909707_67927324
transcript_53928.known	chr16	-	591	4	FSM	ENSG00000205220.12	ENST00000570985.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	42.4604391038163	3561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-15	True	NA	-4	True	AATAAA	-20	NA	67935795	67934505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581
transcript_53930.known	chr16	-	3627	24	FSM	ENSG00000124067.17	ENST00000541864.6	3627	24	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_23	39.9961718394992	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAGGGTAGCCAGGGA	2745	False	NA	NA	False	NA	NA	NA	67966878	67944481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67966752
transcript_53931.known	chr16	-	1240	5	FSM	ENSG00000213398.8	ENST00000570980.1	1240	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	6.17960354715414	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGCACCTGGTGTGGA	496	False	NA	NA	False	NA	NA	NA	67943625	67940245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67940479_67942362_67942588_67942670_67942767_67942860_67942977_67943055
transcript_53933.known	chr16	-	673	5	FSM	ENSG00000124067.17	ENST00000576462.1	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	14.972892172189	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGGGCA	1154	False	NA	NA	False	TATAAA	-11	NA	67968469	67957528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_53938.known	chr16	+	1982	17	FSM	ENSG00000167264.18	ENST00000565263.6	1982	17	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	19.5095129039656	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	-6	True	NA	13	True	CATAAA	-1	NA	68023283	68079320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_53939.known	chr16	+	1933	16	FSM	ENSG00000167264.18	ENST00000358896.10	1933	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	25.3820584052769	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	-9	True	NA	13	True	CATAAA	-1	NA	68023252	68079320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68023352_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_53954.known	chr16	+	1864	15	FSM	ENSG00000167264.18	ENST00000432752.5	1864	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	42.8716642065215	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGGGCTTGTGTCCTG	2	True	NA	8	True	NA	NA	NA	68023291	68079315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_53962.known	chr16	+	833	5	FSM	ENSG00000167264.18	ENST00000564975.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	18.5792222657462	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTGTATTTGAGTTGT	-1	True	NA	NA	False	NA	NA	NA	68023260	68054035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563
transcript_53964.nnic	chr16	+	636	3	NNC	ENSG00000167264.18	novel	373	4	NA	NA	-20	-6519	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	57	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTCTTTTT	281	False	NA	7	True	AATAAA	-20	NA	68023232	68031627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_68023352_68025414_68025495_68031190
transcript_53968.known	chr16	+	2694	6	FSM	ENSG00000103066.13	ENST00000219345.10	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	9.23904756996088	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCTGGCCTACATTCT	-7	True	NA	19	True	AATAAA	-20	NA	68245372	68261058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255765_68255991_68259145
transcript_53969.known	chr16	+	1203	6	FSM	ENSG00000103066.13	ENST00000566188.5	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	22.4374686629308	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTGTTGGCCTCTGG	-7	True	NA	NA	False	NA	NA	NA	68245372	68259692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255890_68255991_68259145
transcript_53971.known	chr16	+	6308	12	FSM	ENSG00000103064.15	ENST00000566454.5	6308	12	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	42.2941294795123	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	29	False	NA	6	True	AATAAA	-16	NA	68264559	68301819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68264577_68266592_68266722_68273817_68273905_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_53975.known	chr16	+	6255	11	FSM	ENSG00000103064.15	ENST00000219343.11	6255	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	25.5765517613301	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	-5	True	NA	6	True	AATAAA	-16	NA	68264525	68301819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_5398.nic	chr1	-	1136	8	NIC	ENSG00000121310.17	novel	2645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	38.9022847028557	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	-27	True	NA	-19	True	ATTAAA	-15	NA	52921774	52896222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_52896598_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_53980.known	chr16	-	4191	5	FSM	ENSG00000103061.13	ENST00000263997.11	4191	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	5.59016994374947	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCAGGTAAGACTCAA	-5	True	NA	NA	False	AGTAAA	-18	NA	68310946	68298033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_68301406_68302380_68302502_68304025_68304233_68310334_68310614_68310734
transcript_53988.nic	chr16	-	1049	4	ISM	ENSG00000103061.13	ENST00000263997.11	4191	5	-5	4122	-5	-156	5prime_fragment	FALSE	canonical	3	100	junction_1	5.71547606649408	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGTGGCTCTTGGGC	-10	True	NA	NA	False	NA	NA	NA	68310951	68302155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_68302502_68304025_68304233_68310334_68310614_68310734
transcript_53989.nic	chr16	+	1115	3	ISM	ENSG00000103064.15	ENST00000618043.4	6124	10	-6	26214	-6	514	5prime_fragment	TRUE	canonical	3	71	junction_1	3	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATACTTTATAT	-21	True	NA	NA	False	NA	NA	NA	68264509	68275609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_68264577_68266592_68266722_68274690
transcript_53991.known	chr16	-	910	3	FSM	ENSG00000103061.13	ENST00000568538.2	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGTGACAACAAAATCT	119	False	NA	NA	False	GATAAA	-25	NA	68310822	68303689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_68304233_68310334_68310614_68310734
transcript_53993.known	chr16	+	658	4	FSM	ENSG00000103064.15	ENST00000567325.1	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	11.8977121983832	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCATATAGTGGGGCTC	3117	False	NA	1	True	ATTAAA	-14	NA	68294677	68297433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68294802_68296363_68296514_68296626_68296811_68297233
transcript_53994.known	chr16	+	3738	19	FSM	ENSG00000132600.18	ENST00000441236.3	3738	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	68.3258577663404	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAATCTCAGCAAGTT	-3	True	NA	8	True	ATTAAA	-19	NA	68311018	68358584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_53995.known	chr16	+	4238	19	FSM	ENSG00000132600.18	ENST00000339507.9	4238	19	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	76.8349401294187	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAGAAATTAAAAAAGTTT	2	True	NA	-23	True	AATACA	-9	NA	68311133	68358553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68311746_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_53997.nic	chr16	+	2311	18	NIC	ENSG00000132600.18	novel	3738	19	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	98	junction_1	59.827433500928	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-36	True	NA	13	True	AATAAA	-18	NA	68310985	68357259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54.known	ERCC-00126	+	1111	1	FSM	ERCC-00126A	DQ459427	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00126_+_0_1100
transcript_54000.nic	chr16	+	2307	18	NIC	ENSG00000132600.18	novel	4265	21	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	70.6511484343072	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-20	True	NA	13	True	AATAAA	-18	NA	68311001	68357259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68311112_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54004.known	chr16	+	2091	17	FSM	ENSG00000132600.18	ENST00000449359.7	2091	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	85.8850066949989	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	34	True	NA	13	True	AATAAA	-18	NA	68311055	68357259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_5401.nic	chr1	-	1118	8	NIC	ENSG00000121310.17	novel	1126	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	41.0634153673638	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-27	True	NA	-28	True	ATTAAA	-6	NA	52921774	52896231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_54014.nic	chr16	+	2217	16	FSM	ENSG00000132600.18	ENST00000691961.1	3416	16	-35	1234	0	0	multi-exon	FALSE	canonical	3	56	junction_11	83.7008960525513	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-29	True	NA	13	True	AATAAA	-18	NA	68310992	68357259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54018.nic	chr16	+	2089	15	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_10	76.0214792418725	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	-36	True	NA	13	True	AATAAA	-18	NA	68310985	68357259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54026.known	chr16	+	1723	11	FSM	ENSG00000132600.18	ENST00000565356.5	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_10	82.3103881657716	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATAAATTAAGCGT	42	True	NA	NA	False	NA	NA	NA	68311063	68352660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247
transcript_54028.known	chr16	+	1062	2	FSM	ENSG00000287760.1	ENST00000666035.1	1062	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAGAAAA	1	True	NA	NA	False	NA	NA	NA	68448842	68450002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68449067_68449164
transcript_54033.known	chr16	+	4568	5	FSM	ENSG00000184939.16	ENST00000563169.7	4568	5	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	18.1383571472171	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTCAGTTTGTCGTTT	-12	True	NA	5	True	AATAAA	-18	NA	68539290	68567131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68539480_68539757_68539826_68557997_68558125_68558472_68558569_68563043
transcript_54034.known	chr16	+	695	5	FSM	ENSG00000184939.16	ENST00000611381.4	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	19.5751756058534	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	13	True	NA	NA	False	NA	NA	NA	68539315	68576040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68539470_68539757_68539826_68557997_68558125_68558472_68558569_68575790
transcript_54038.nic	chr16	+	455	3	NIC	ENSG00000184939.16	novel	545	4	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGTGTTTTTCTTTTGC	3745	False	NA	23	True	AATAAA	-37	NA	68539260	68555240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68539480_68539757_68539826_68555072
transcript_54039.known	chr16	+	199	2	FSM	ENSG00000184939.16	ENST00000573161.1	199	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGTGTTTTTCTTTTGC	47	False	NA	23	True	AATAAA	-37	NA	68539794	68555240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68539826_68555072
transcript_54040.known	chr16	+	3611	16	FSM	ENSG00000062038.15	ENST00000429102.6	3611	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_15	221.02900764882	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGCCTGGGGAGTGAA	1	True	NA	13	True	ATTAAA	-13	NA	68644992	68699036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698092
transcript_54041.known	chr16	+	4452	16	FSM	ENSG00000062038.15	ENST00000264012.9	4452	16	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_13	87.5992389616866	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACTAATTCTGTAAAG	-11	True	NA	5	True	AATAAA	-16	NA	68645309	68700292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
transcript_54047.nic	chr16	+	1869	8	ISM	ENSG00000062038.15	ENST00000429102.6	3611	16	282	17172	-26	-528	5prime_fragment	FALSE	canonical	3	791	junction_7	88.3222300812803	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTCCGAGCAACTG	-1	True	NA	8	True	AATAAA	-20	NA	68645274	68681864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967
transcript_54054.known	chr16	+	607	3	FSM	ENSG00000062038.15	ENST00000569080.2	607	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTCTCTGTGAGTCTCT	0	True	NA	13	True	AATACA	-25	NA	68695824	68727468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68695924_68722424_68722617_68727152
transcript_54055.known	chr16	+	4893	18	FSM	ENSG00000103047.8	ENST00000261778.2	4893	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_14	10.7648666011789	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACTCCACGCAACCCAC	-5	True	NA	21	True	AATAAA	-28	NA	68843530	69085182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68843712_68859883_68860525_68862944_68863062_68867078_68867221_68875153_68875291_68878117_68878281_68880547_68880631_68900433_68900547_68902327_68902505_68907442_68907576_68909210_68909403_68919084_68919220_68927567_68928084_68930237_68930296_68974027_68974169_69022827_69022980_69040307_69040422_69083484
transcript_54059.known	chr16	+	542	5	FSM	ENSG00000103047.8	ENST00000562000.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	37.1214223865412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTGAAGCACGTAGTG	NA	False	NA	NA	False	NA	NA	NA	68973039	69083515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68973144_68974027_68974169_69022827_69022980_69040307_69040422_69083484
transcript_54063.known	chr16	+	9789	7	FSM	ENSG00000168807.17	ENST00000336278.9	9754	7	-35	0	-18	0	multi-exon	FALSE	canonical	3	50	junction_6	7.22072634081149	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTTGTTTTTTTTTTC	-29	True	NA	NA	False	AATAAA	-17	NA	69187128	69309052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69187747_69245601_69245816_69260049_69260261_69270142_69270286_69284047_69284245_69299589_69299775_69300831
transcript_54065.known	chr16	+	2186	17	FSM	ENSG00000141076.18	ENST00000562237.5	2186	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	194.896276500476	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGTCATTATAAATG	-30	True	NA	NA	False	AATAAA	-15	NA	69132595	69169020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69132690_69133511_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_54068.nic	chr16	+	2081	16	NIC	ENSG00000141076.18	novel	2188	17	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	221.435578793372	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	-31	True	NA	NA	False	AATAAA	-16	NA	69132594	69169021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_69132690_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_54075.nic	chr16	-	1380	5	NIC	ENSG00000168802.14	novel	1073	4	NA	NA	-87	0	combination_of_known_junctions	FALSE	canonical	3	148	junction_1	164.656270758207	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	442	False	NA	-10	True	AATAAA	-15	NA	69132233	69118009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_69118526_69120106_69120650_69121052_69121171_69121435_69121494_69132088
transcript_54077.known	chr16	+	4191	4	FSM	ENSG00000103044.11	ENST00000569188.6	4191	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	13.735598518691	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	-9	True	NA	13	True	AATAAA	-22	NA	69105652	69117660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69105788_69109395_69110032_69113440_69113543_69114342
transcript_54079.known	chr16	+	900	4	FSM	ENSG00000103044.11	ENST00000566118.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	12.3558353285671	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTCAACGTGGAGCGG	15	False	NA	NA	False	NA	NA	NA	69106608	69114397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69106716_69109395_69110032_69113440_69113543_69114342
transcript_54083.nic	chr16	-	1262	4	NIC	ENSG00000286140.2	novel	2761	3	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	3	148	junction_1	78.029908795709	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	442	False	NA	-10	True	AATAAA	-15	NA	69132233	69118009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_69118526_69120106_69120650_69121435_69121494_69132088
transcript_54085.known	chr16	-	1073	4	FSM	ENSG00000168802.14	ENST00000398235.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	139.207279503145	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGACCAAACCCCAATCT	1	True	NA	NA	False	NA	NA	NA	69132146	69119810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132088
transcript_54086.known	chr16	-	2921	4	FSM	ENSG00000168802.14	ENST00000448552.7	2921	4	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_2	72.8941393772885	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-12	True	NA	-10	True	AATAAA	-15	NA	69132588	69118009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132483
transcript_54091.known	chr16	-	2761	3	FSM	ENSG00000286140.2	ENST00000306585.9	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	56.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-4	True	NA	-10	True	AATAAA	-15	NA	69132151	69118009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69120650_69121435_69121494_69132088
transcript_54094.nnic	chr16	-	718	3	NIC	ENSG00000286140.2	novel	2761	3	NA	NA	-82	-1	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	57.5	2265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGTGTCACTGTGTTT	442	False	NA	-11	True	AATAAA	-14	NA	69132233	69118010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_69118526_69121435_69121494_69132088
transcript_54097.known	chr16	+	2188	17	FSM	ENSG00000141076.18	ENST00000314423.12	2188	17	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	72.6858609015536	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	23	True	NA	NA	False	AATAAA	-16	NA	69132648	69169021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_54098.known	chr16	+	4106	11	FSM	ENSG00000132612.16	ENST00000254950.13	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_8	32.9698346977961	585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGCCCACCACAAAAGC	-25	True	NA	NA	False	AATAAA	-19	NA	69311349	69326939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69311533_69316007_69316120_69316224_69316373_69318649_69318712_69318822_69318943_69319386_69319544_69320140_69320290_69320687_69320770_69321050_69321271_69322559_69322701_69324207
transcript_54101.known	chr16	-	2996	10	FSM	ENSG00000132604.11	ENST00000254942.8	2996	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	60.8221450898711	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAAGTAGCTGTTTAATT	-11	True	NA	-4	True	ATTAAA	-17	NA	69386007	69355566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69357057_69357517_69357562_69361403_69361490_69366806_69367200_69368375_69368483_69370482_69370630_69372268_69372356_69384579_69384711_69385390_69385487_69385592
transcript_54104.known	chr16	+	2055	5	FSM	ENSG00000132603.15	ENST00000254940.10	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	28.9946115683587	2470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGATTGTGGCCTT	-12	True	NA	19	True	AATAAA	-30	NA	69339771	69343106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341179_69341321_69341532
transcript_54112.known	chr16	+	1887	4	FSM	ENSG00000132603.15	ENST00000254941.6	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	204.43798298968	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAACTTGATTGTGGCC	13	True	NA	17	True	AATAAA	-28	NA	69339796	69343104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341532
transcript_54117.known	chr16	-	2859	2	FSM	ENSG00000258429.2	ENST00000288022.2	2859	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGTAAAATCTCTCCC	0	True	NA	NA	False	AATAAA	-18	NA	69330588	69326912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69329180_69329996
transcript_54118.known	chr16	+	577	3	FSM	ENSG00000103018.18	ENST00000684784.1	1679	3	196	906	103	124	multi-exon	FALSE	canonical	1	1	junction_1	501.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTATTTTTCCATTT	127	False	NA	NA	False	NA	NA	NA	69424782	69462902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69459092_69459122_69462429
transcript_54119.known	chr16	+	2421	1	FSM	ENSG00000260108.1	ENST00000567834.1	2421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCGACTACACTTAT	1220	False	NA	25	True	AATAAA	-18	NA	69463843	69466264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69463800_69466300
transcript_54120.known	chr16	+	4262	5	FSM	ENSG00000103018.18	ENST00000307892.13	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	32.889017923921	1750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCGACTACACTTAT	0	True	NA	25	True	AATAAA	-18	NA	69424618	69466264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092_69459122_69462429
transcript_54121.known	chr16	+	2492	3	FSM	ENSG00000103018.18	ENST00000514123.5	2492	3	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_2	11	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAAAAACTATTGAGC	0	True	NA	NA	False	NA	NA	NA	69424618	69450238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69447149_69447279_69448114
transcript_54122.known	chr16	+	1658	3	FSM	ENSG00000103018.18	ENST00000688840.1	4203	3	59	2486	-2	-26	multi-exon	FALSE	canonical	0	0	junction_2	486	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATAAAATACTGGCGGT	22	False	NA	-8	True	NA	NA	NA	69424677	69463778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69447149_69447279_69462429
transcript_54125.known	chr16	+	1588	1	FSM	ENSG00000260772.1	ENST00000561622.1	1588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGCAGTGGATAGCTG	3011	False	NA	3	True	AATAAA	-15	NA	69703064	69704652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69703100_69704700
transcript_54127.known	chr16	-	2521	6	FSM	ENSG00000181019.13	ENST00000320623.10	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_2	37.0599514300815	1979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	1	True	NA	-3	True	AATAAA	-26	NA	69726560	69709400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69711282_69713027_69713130_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_54128.known	chr16	-	2527	5	FSM	ENSG00000181019.13	ENST00000379047.7	2527	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	163.226070221641	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	NA	False	NA	-3	True	AATAAA	-26	NA	69726668	69709400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69711282_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_54130.known	chr16	-	1716	9	FSM	ENSG00000141101.13	ENST00000268802.10	1716	9	0	0	0	0	multi-exon	TRUE	canonical	3	444	junction_4	26.219029348929	3145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	2	True	NA	-25	True	AATAAA	-15	NA	69754926	69741870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
transcript_54131.known	chr16	-	556	4	FSM	ENSG00000141101.13	ENST00000562416.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	4.71404520791032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCAGCTTGTGAGCCTG	11	True	NA	NA	False	AAAAAG	-2	NA	69754917	69749309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69749339_69749558_69749631_69752240_69752372_69754593
transcript_54132.known	chr16	+	4487	24	FSM	ENSG00000198373.13	ENST00000359154.7	4487	24	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	24.9852130182077	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTGTTGTTGTGGAT	-9	True	NA	14	True	AATAAA	-14	NA	69762331	69941739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760_69908851_69917708_69917884_69925429_69925485_69929447_69929530_69930129_69930259_69931151_69931228_69931508_69931581_69931801_69931891_69933969_69934130_69935852_69935987_69936311_69936453_69937117_69937239_69937547_69937653_69939026_69939124_69939340_69939414_69939840
transcript_54135.nic	chr16	+	2502	9	ISM	ENSG00000198373.13	ENST00000359154.7	4487	24	-23	31489	-19	0	5prime_fragment	FALSE	canonical	3	138	junction_1	36.5476999960326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTATTTTGTTTATA	NA	False	NA	2	True	AATAAA	-13	NA	69762308	69910250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760
transcript_54136.known	chr16	+	3660	9	FSM	ENSG00000157322.18	ENST00000568102.5	3660	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.87096564180051	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCTGGCTGTCATTTA	7654	False	NA	NA	False	NA	NA	NA	69951173	69964452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69951491_69952034_69952127_69954333_69954574_69958941_69959040_69959459_69959582_69959738_69959847_69960372_69962085_69962975_69963068_69963573
transcript_54145.nnic	chr16	+	1196	6	NNC	ENSG00000090857.14	novel	8549	19	NA	NA	-132	-18270	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	41.4661307575231	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACTTTGTCAGTGTTTC	NA	False	NA	NA	False	AATAAA	-26	NA	70114199	70130321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_70114441_70120460_70120720_70127259_70127394_70128783_70128866_70128958_70129123_70130005
transcript_54148.known	chr16	+	8549	19	FSM	ENSG00000090857.14	ENST00000288050.9	8549	19	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	30.1647738305281	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTGCTTGTGAAATGTTC	-16	True	NA	22	True	AATAAA	-22	NA	70114331	70162537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70114441_70114820_70114931_70120460_70120720_70127259_70127394_70128783_70128866_70128958_70129123_70130422_70130545_70131301_70131420_70132150_70132301_70136193_70136387_70138898_70139024_70142233_70142390_70142552_70142687_70143509_70143659_70144420_70144534_70146133_70146229_70148463_70148554_70153390_70153574_70156474
transcript_54149.known	chr16	+	1970	12	FSM	ENSG00000157335.21	ENST00000569347.6	1970	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.16489003373258	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCATGCTCATTTCAA	239	False	NA	NA	False	ATTAAA	-17	NA	70174024	70186895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70174403_70174946_70175039_70177240_70177481_70181849_70181948_70182367_70182490_70182646_70182755_70183280_70183374_70183752_70183860_70184493_70184624_70184895_70184993_70185884_70185977_70186482
transcript_54151.known	chr16	-	5163	1	FSM	ENSG00000223496.3	ENST00000435634.3	5163	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTTCTTTTATTTTCCT	-4	True	NA	0	True	AATAAA	-22	NA	70251940	70246777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70246800_70251900
transcript_54152.known	chr16	-	3717	21	FSM	ENSG00000090861.17	ENST00000674963.1	3717	21	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_20	285.914829975642	1232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCGCGTCTTTAAACAA	NA	False	NA	NA	False	NA	NA	NA	70289580	70251982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
transcript_54159.known	chr16	+	2923	12	FSM	ENSG00000168872.17	ENST00000302243.12	2923	12	0	0	0	0	multi-exon	TRUE	canonical	3	323	junction_1	121.949928757531	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTGTGTATATAAAGTGA	14	True	NA	17	True	AATATA	-18	NA	70346902	70373383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361511_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_54164.known	chr16	+	1717	10	FSM	ENSG00000157349.17	ENST00000393657.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	185.897821396594	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCATCTTTTAATTTG	-30	True	NA	43	True	AATACA	-19	NA	70299161	70333826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_54165.known	chr16	+	1790	9	FSM	ENSG00000157349.17	ENST00000562519.5	1790	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	241.495341569977	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAGTGGTGGAAAGGG	4325	False	NA	NA	False	NA	NA	NA	70299141	70333972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_54174.known	chr16	+	564	6	FSM	ENSG00000168872.17	ENST00000562509.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	164.129948516412	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGCTGAACCGTGAGT	NA	False	NA	NA	False	NA	NA	NA	70346860	70361496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70356845_70356907_70361417
transcript_54180.known	chr16	-	887	3	FSM	ENSG00000261777.6	ENST00000570278.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAAATAATTTTTTTCT	24	True	NA	NA	False	NA	NA	NA	70346747	70333782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70333961_70341939_70342100_70346198
transcript_54182.known	chr16	+	1765	12	FSM	ENSG00000157349.17	ENST00000563206.5	1765	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	176.339782829243	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	5040	False	NA	40	True	AATACA	-16	NA	70294776	70333823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70294918_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_54183.known	chr16	+	3275	12	FSM	ENSG00000157349.17	ENST00000288071.11	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_4	115.740590535562	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGCAGACTCCCAC	-6	True	NA	104	True	ATTAAA	-26	NA	70299185	70335305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_54184.known	chr16	+	1692	11	FSM	ENSG00000157349.17	ENST00000355992.7	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	178.443520476368	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	2	True	NA	40	True	AATACA	-16	NA	70299193	70333823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_54185.known	chr16	+	1608	11	FSM	ENSG00000157349.17	ENST00000451014.7	1608	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	221.897476326343	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCTTGGAAGATTAGGC	-20	True	NA	-4	True	NA	NA	NA	70294796	70333779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70294918_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_54190.known	chr16	-	2820	19	FSM	ENSG00000103051.20	ENST00000323786.10	2820	19	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_11	34.4364237973489	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTGCTGTTACC	-8	True	NA	-34	True	AATAAA	-16	NA	70523554	70480570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_54191.known	chr16	-	3000	20	FSM	ENSG00000103051.20	ENST00000564415.6	3000	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_16	121.290795461617	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGCTGTTACCAGG	-12	True	NA	-31	True	AATAAA	-19	NA	70523558	70480567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70515867_70516041_70517625_70517741_70519648_70519732_70523372
transcript_54195.known	chr16	+	9692	26	FSM	ENSG00000189091.13	ENST00000302516.10	9692	26	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_18	108.99536870895	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGCATTTCTTTTTCTT	11	True	NA	5	True	AATAAA	-18	NA	70523815	70577668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70523929_70526586_70526727_70528872_70529200_70530744_70530918_70532478_70532621_70535307_70535421_70538322_70538461_70539103_70539208_70541668_70541835_70544437_70544534_70548369_70548443_70554445_70554598_70555050_70555207_70556178_70556335_70556885_70557030_70560468_70560592_70561629_70561785_70563875_70564051_70565064_70565271_70565367_70565525_70567410_70567537_70568282_70568496_70569042_70569142_70570005_70570150_70571094_70571200_70571672
transcript_54211.nnic	chr16	+	1730	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-24789	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.48528137423857	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70621769	70660682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_70621876_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_54213.nnic	chr16	+	1986	7	NNC	ENSG00000157368.12	novel	1613	6	NA	NA	-22791	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	4.6696419087073	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	33	True	ATTAAA	-18	NA	70623767	70660682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_70624130_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_54216.known	chr16	+	1607	6	FSM	ENSG00000157368.12	ENST00000288098.7	1613	6	6	0	2	0	multi-exon	FALSE	canonical	3	17	junction_3	4.12795348811006	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	7	True	NA	33	True	ATTAAA	-18	NA	70646564	70660682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_54218.known	chr16	-	1255	1	FSM	ENSG00000279122.1	ENST00000623155.1	1255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCGTGGTGGCACT	NA	False	NA	NA	False	AATAAA	-21	NA	70770221	70768966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70769000_70770200
transcript_54222.known	chr16	-	4875	3	FSM	ENSG00000180917.18	ENST00000434935.7	4875	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	11	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTTTGTAATCTGT	-1	True	NA	NA	False	ATTAAA	-15	NA	71289402	71281391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71285940_71288877_71288938_71289135
transcript_54225.known	chr16	-	2772	2	FSM	ENSG00000180917.18	ENST00000564690.1	2772	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACGAAAA	-28	True	NA	NA	False	NA	NA	NA	71289429	71286459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71288938_71289135
transcript_54226.known	chr16	+	1454	11	FSM	ENSG00000172137.19	ENST00000302628.9	1454	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	6.24819974072532	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATCTTGTCTAGTGGTC	-2	True	NA	8	True	AATAAA	-28	NA	71358722	71390433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71385576_71385649_71389748
transcript_54228.known	chr16	+	704	10	FSM	ENSG00000172137.19	ENST00000562305.5	704	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.11805216802087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGAGATTGTGCTCTG	69	False	NA	NA	False	NA	NA	NA	71358793	71389826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71389748
transcript_54234.known	chr16	-	2612	5	FSM	ENSG00000157429.16	ENST00000565637.5	2612	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.64852927038918	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGTTTATTCAGTT	22	False	NA	NA	False	ACTAAA	-22	NA	71489314	71474378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71476273_71478227_71478342_71478878_71479006_71484588_71484749_71488997
transcript_54235.known	chr16	-	1947	5	FSM	ENSG00000157429.16	ENST00000569717.5	1947	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	6.04152298679729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGAGTTAGGTTTTCT	7	True	NA	-2	True	AATAAA	-34	NA	71484613	71474748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71476273_71478227_71478342_71478878_71479101_71482081_71482144_71484588
transcript_54237.known	chr16	-	1286	1	FSM	ENSG00000157429.16	ENST00000617615.1	1286	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTCTTAATTTTTG	4	True	NA	NA	False	AATAAA	-15	NA	71564938	71563652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71563700_71564900
transcript_54244.known	chr16	-	3677	12	FSM	ENSG00000261611.6	ENST00000561908.1	3677	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	19.2306573423318	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTATGAGTACATTTTT	25	False	NA	2	True	AATAAA	-20	NA	71489311	71447599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71449886_71453242_71453351_71454041_71454169_71456071_71456122_71456763_71456829_71462209_71462371_71463545_71463649_71478227_71478342_71478878_71479006_71482081_71482144_71484588_71484749_71488997
transcript_54245.known	chr16	-	3242	6	FSM	ENSG00000167377.19	ENST00000393539.6	3242	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	21.8814990345726	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	19	True	NA	5	True	AATAAA	-23	NA	71462214	71447596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456071_71456122_71456763_71456829_71461658
transcript_54247.nic	chr16	-	3178	5	NIC	ENSG00000167377.19	novel	2627	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	14	junction_3	19.4084388862165	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-14	True	NA	5	True	AATAAA	-23	NA	71462247	71447596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763_71456829_71461658
transcript_5425.nic	chr1	-	1234	4	ISM	ENSG00000121310.17	ENST00000467988.2	702	7	-56	9662	0	213	5prime_fragment	FALSE	canonical	3	62	junction_3	29.4089933334837	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAAAGAGG	-27	True	NA	NA	False	AAAAAG	-1	NA	52921774	52907098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_52907955_52911565_52911654_52911722_52911791_52921552
transcript_54250.known	chr16	-	3186	5	FSM	ENSG00000167377.19	ENST00000357254.8	3186	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	21.6794833886788	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	NA	False	NA	5	True	AATAAA	-23	NA	71462759	71447596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456763_71456829_71462209
transcript_54251.known	chr16	+	230	3	FSM	ENSG00000247324.2	ENST00000567341.1	230	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAGCTCCTACTCCTAC	NA	False	NA	NA	False	AATAAA	-15	NA	71462326	71464067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71462387_71463257_71463293_71463932
transcript_54253.known	chr16	-	2358	3	FSM	ENSG00000167377.19	ENST00000539742.5	2358	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATGAAAAATAAAGAT	-19	True	NA	-34	True	NA	NA	NA	71462252	71447635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71449886_71456763_71456829_71462209
transcript_54255.nic	chr16	-	871	3	ISM	ENSG00000167377.19	ENST00000497160.5	2799	7	-7	7763	-1	1422	5prime_fragment	FALSE	canonical	3	13	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTCGGACATAGAGACTC	-20	True	NA	NA	False	AAGAAA	-9	NA	71462253	71455359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_71456122_71456763_71456829_71462209
transcript_54256.known	chr16	+	2793	2	FSM	ENSG00000247324.2	ENST00000500612.1	2793	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	71462277	71465941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71462387_71463257
transcript_54258.nic	chr16	-	1503	2	ISM	ENSG00000167377.19	ENST00000564588.1	576	3	147	3756	0	-3756	5prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGCTCTGCTACG	-12	True	NA	NA	False	CATAAA	-18	NA	71462245	71460537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_71462005_71462209
transcript_54260.known	chr16	-	2589	4	ISM	ENSG00000167377.19	ENST00000647773.2	2627	5	5419	0	0	0	3prime_fragment	FALSE	canonical	3	14	junction_3	19.7989898732233	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	5405	False	NA	5	True	AATAAA	-23	NA	71456828	71447596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763
transcript_54261.known	chr16	-	2690	5	FSM	ENSG00000167377.19	ENST00000358700.7	2690	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.3246274380513	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTTATTTAAAAAAGGAAA	5405	False	NA	-17	True	AATAAA	-1	NA	71456828	71447618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71449883_71450589_71450716_71453242_71453351_71454041_71454169_71456763
transcript_54262.known	chr16	+	2412	3	FSM	ENSG00000140835.10	ENST00000338482.5	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTTCTTTCTTGTGT	NA	False	NA	NA	False	AATAGA	-13	NA	71525232	71538746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71525365_71526119_71526313_71536659
transcript_54265.known	chr16	+	2159	2	FSM	ENSG00000140835.10	ENST00000539698.4	2159	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTCTTTCTTGTGTGA	-7	True	NA	NA	False	AATAGA	-15	NA	71526425	71538748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71526496_71536659
transcript_54267.known	chr16	+	742	3	FSM	ENSG00000260886.2	ENST00000656895.1	742	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGACCTTCCTCTGCTG	NA	False	NA	NA	False	AATAAA	-26	NA	71564951	71572439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71565123_71566050_71566202_71572019
transcript_5427.known	chr1	+	2759	16	FSM	ENSG00000116171.19	ENST00000371514.8	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	352.117871678726	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATCTGGACATAATCAC	-9	True	NA	107	True	AATAAA	-30	NA	52927275	53051698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52950754_52950887_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_54270.known	chr16	+	2214	3	FSM	ENSG00000140832.11	ENST00000299952.4	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	37.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACGTGTTTTATACCTA	-1	True	NA	13	True	AATAAA	-20	NA	71626186	71641965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71626697_71629366_71629495_71640389
transcript_54271.known	chr16	+	850	2	FSM	ENSG00000140832.11	ENST00000567566.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTAGATTTCCTGTG	2	True	NA	NA	False	AAAAAG	-17	NA	71626160	71629680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71626697_71629366
transcript_54272.known	chr16	-	3593	24	FSM	ENSG00000166747.13	ENST00000393512.7	3593	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	43.9945433976904	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATGGAGTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71809201	71732384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71767876_71767886_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_54274.known	chr16	-	6602	23	FSM	ENSG00000166747.13	ENST00000299980.9	6602	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_22	19.6750460740637	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTGCTTCTTAC	-9	True	NA	0	True	AATAAA	-25	NA	71808834	71728999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_54277.known	chr16	+	1962	11	FSM	ENSG00000182149.21	ENST00000541571.6	1962	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	341.243314952835	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTCTGTTGATCCTG	9519	False	NA	NA	False	NA	NA	NA	71893933	71927973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71894482_71894720_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_54285.known	chr16	+	1125	7	FSM	ENSG00000182149.21	ENST00000538850.5	1125	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	309.176549707265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTGGACAGTGGGAGA	22	True	NA	NA	False	NA	NA	NA	71895547	71928152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71895590_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_54289.known	chr16	+	428	4	FSM	ENSG00000224470.9	ENST00000569119.1	428	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	27.6043474836845	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTTACCTGGAGAAGCAG	56	False	NA	NA	False	NA	NA	NA	71846047	71885268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71846105_71848009_71848072_71883116_71883404_71885246
transcript_54293.known	chr16	+	7896	3	FSM	ENSG00000224470.9	ENST00000427980.7	7896	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	3	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTTGCGCCTTC	-16	True	NA	22	True	TATAAA	-14	NA	71845975	71857328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71846105_71848009_71848072_71849623
transcript_54296.known	chr16	+	445	2	FSM	ENSG00000224470.9	ENST00000565676.1	445	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTAAAAGAAAGCACAAAG	77	False	NA	NA	False	NA	NA	NA	71846068	71848418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71846105_71848009
transcript_54297.known	chr16	+	2356	10	FSM	ENSG00000182149.21	ENST00000329908.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	275.531316138183	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTACTGTTTGGTCA	17	True	NA	31	True	AATAAA	-21	NA	71895542	71929010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924772_71924818_71927613
transcript_54298.known	chr16	+	4082	10	FSM	ENSG00000182149.21	ENST00000535424.5	4082	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	271.050539681677	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTTTTAGTATTTTTT	293	False	NA	9	True	AATAAA	-25	NA	71894718	71930639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_54299.known	chr16	+	2255	9	FSM	ENSG00000182149.21	ENST00000378798.9	2255	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	264.963411389195	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTACTGTTTGGT	27	True	NA	29	True	AATAAA	-19	NA	71895552	71929008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71924768_71924818_71927613
transcript_54300.known	chr16	+	894	7	FSM	ENSG00000182149.21	ENST00000537613.5	894	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	339.833006375517	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTATATATAAGTGTGG	1068	False	NA	NA	False	NA	NA	NA	71895493	71922680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71895590_71915601_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473
transcript_54301.known	chr16	+	2031	7	FSM	ENSG00000182149.21	ENST00000456820.2	2031	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	333.843110191333	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGCTGCTAATAAAGTTA	940	False	NA	-5	True	NA	NA	NA	71916559	71928974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923385_71927613
transcript_54305.known	chr16	+	4669	9	FSM	ENSG00000102967.12	ENST00000219240.9	4669	9	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	20.3004772111396	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTCTGTGACTTACTT	-6	True	NA	13	True	AATATA	-14	NA	72008743	72027659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123_72021312_72022361_72022476_72023164_72023319_72023473_72023634_72024144
transcript_54309.known	chr16	+	607	5	FSM	ENSG00000102967.12	ENST00000574309.5	607	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	75.2429398681365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTCAGGCAAGCCTTT	19	False	NA	NA	False	NA	NA	NA	72008768	72024238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72024144
transcript_54313.known	chr16	+	4323	27	FSM	ENSG00000140829.12	ENST00000268482.8	4323	27	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	37.4117699734239	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTCTGACTTTTTCC	33	True	NA	22	True	AATAAA	-22	NA	72093846	72112912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_54316.known	chr16	-	3427	21	FSM	ENSG00000118557.16	ENST00000237353.15	3427	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.35287261472237	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGGTGAGCTGTTG	-5	True	NA	NA	False	AATAAA	-19	NA	72172155	72119096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72119355_72119850_72120090_72122913_72122989_72123545_72123650_72124766_72124935_72125237_72125406_72125967_72126133_72128656_72128795_72129065_72129234_72130212_72130358_72130532_72130723_72132747_72132992_72136447_72136606_72136692_72136820_72139288_72139400_72140411_72140583_72150607_72150830_72154210_72154460_72164763_72164917_72171196_72171269_72172053
transcript_54318.known	chr16	+	1187	5	FSM	ENSG00000257017.10	ENST00000565574.5	1187	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.1650635094611	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGCATTGCTGAGTCAA	1	True	NA	NA	False	NA	NA	NA	72054628	72061009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72054658_72056160_72056244_72056529_72056632_72057391_72057467_72060111
transcript_54319.nnic	chr16	+	1270	5	NNC	ENSG00000261701.9	novel	1558	6	NA	NA	10002	0	intron_retention	FALSE	canonical	2	3	junction_3	1.92028643696715	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTTGTGTTCAGTC	NA	False	NA	NA	False	AATAAA	-19	NA	72073230	72077246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72073294_72073891_72073978_72074283_72074386_72075144_72075220_72076302
transcript_5432.known	chr1	+	1889	15	FSM	ENSG00000116171.19	ENST00000371509.8	1889	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	363.994673654684	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATTAGGAACAGTAA	1	True	NA	NA	False	NA	NA	NA	52927285	53050970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_54321.nnic	chr16	-	931	4	NNC	ENSG00000140830.9	novel	2521	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	30.6521704868604	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	0	True	NA	-4	True	AATAAA	-17	NA	72093657	72084856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_72085176_72088986_72089139_72090617_72090787_72093366
transcript_54325.known	chr16	-	2521	4	FSM	ENSG00000140830.9	ENST00000268483.8	2521	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	8.05536398239638	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	2	True	NA	-4	True	AATAAA	-17	NA	72093620	72084856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72086803_72088986_72089139_72090617_72090787_72093366
transcript_54328.nic	chr16	+	816	3	ISM	ENSG00000140829.12	ENST00000268482.8	4323	27	-178	16000	56	0	5prime_fragment	FALSE	canonical	3	130	junction_1	7	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCGGGAACATGGTGTCTA	NA	False	NA	NA	False	NA	NA	NA	72093668	72096912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_72094052_72096138_72096481_72096821
transcript_54329.nic	chr16	+	1331	3	ISM	ENSG00000140829.12	ENST00000268482.8	4323	27	-178	15485	56	515	5prime_fragment	FALSE	canonical	3	130	junction_1	7	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGCACTAGTATTTTTTGA	NA	False	NA	NA	False	ATTAAA	-20	NA	72093668	72097427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_72094052_72096138_72096481_72096821
transcript_54334.nnic	chr16	+	753	2	NNC	ENSG00000140829.12	novel	2258	12	NA	NA	3441	0	intron_retention	FALSE	canonical	3	15	junction_1	0	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGCATGTCTGACTTTT	3688	False	NA	19	True	AATAAA	-19	NA	72112070	72112909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72112327_72112412
transcript_5434.known	chr1	+	742	4	FSM	ENSG00000116171.19	ENST00000533119.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	396.930164582582	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCAGTTTAAGAGTTTT	6	True	NA	NA	False	AAAAAG	-45	NA	53014965	53051062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53015044_53038916_53039047_53047857_53047938_53050608
transcript_54351.known	chr16	-	436	7	FSM	ENSG00000261008.8	ENST00000655530.1	436	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7.55902698029904	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-3	True	NA	NA	False	AATAAA	-27	NA	72664977	72521007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72521042_72522552_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_54355.nnic	chr16	-	1197	6	NIC	ENSG00000261008.8	novel	1984	6	NA	NA	2	792	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	9.86711710683521	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTGAACAAGTGTT	-28	True	NA	NA	False	NA	NA	NA	72665002	72478958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_72479791_72522552_72522624_72523331_72523416_72540577_72540612_72570450_72570516_72664891
transcript_54359.known	chr16	-	1984	6	FSM	ENSG00000261008.8	ENST00000659470.1	1984	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	5.91269819963779	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-40	False	NA	NA	False	AATAAA	-27	NA	72665014	72521007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_54366.known	chr16	-	831	5	FSM	ENSG00000261008.8	ENST00000570035.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.0591997693654	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAACACACGCAAACACA	-35	True	NA	NA	False	AATAAA	-38	NA	72665009	72522137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72522624_72523331_72523416_72555264_72555327_72570434_72570516_72664891
transcript_54371.nnic	chr16	-	1017	2	NIC	ENSG00000261008.8	novel	563	7	NA	NA	-34	-46399	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGAGGTGACACA	NA	False	NA	NA	False	AAAAAG	-12	NA	72627766	72569730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_72570516_72627534
transcript_54372.nic	chr16	-	896	2	ISM	ENSG00000261008.8	ENST00000570035.5	831	5	7	47593	2	-46399	5prime_fragment	FALSE	canonical	2	12	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGAGGTGACACA	-28	True	NA	NA	False	AAAAAG	-12	NA	72665002	72569730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_72570516_72664891
transcript_54399.nnic	chr16	+	775	5	NNC	ENSG00000259768.7	novel	2409	5	NA	NA	1	-9384	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	5.71729831301464	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	-18	True	NA	NA	False	AATAAA	-17	NA	72665128	72812308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72713332_72713417_72713946_72713990_72745404_72745467_72811927
transcript_54400.known	chr16	+	2409	5	FSM	ENSG00000259768.7	ENST00000668995.1	2409	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	4.60298815988049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAAAGTGAGTTTTTT	-24	True	NA	NA	False	NA	NA	NA	72665122	72822781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72665334_72713332_72713417_72713946_72713990_72745404_72745467_72820772
transcript_54403.nic	chr16	+	870	5	NIC	ENSG00000259768.7	novel	1031	6	NA	NA	-1	1	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	5.76085931090146	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGCTCTCGTGATTGT	-20	True	NA	9	True	AATAAA	-22	NA	72665126	72787587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_72665334_72713332_72713417_72745404_72745467_72781727_72781820_72787162
transcript_54405.nnic	chr16	+	809	5	NNC	ENSG00000259768.7	novel	2401	5	NA	NA	-1	-9384	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	6.81909084849293	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	-3	True	NA	NA	False	AATAAA	-17	NA	72665143	72812308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72713332_72713417_72745404_72745467_72781727_72781820_72811927
transcript_54406.known	chr16	+	2401	5	FSM	ENSG00000259768.7	ENST00000653037.1	2401	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.1894019222742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTATACTGTGTCATAA	-9	True	NA	NA	False	NA	NA	NA	72665137	72822739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72665334_72713332_72713417_72745404_72745467_72781727_72781820_72820772
transcript_54411.nnic	chr16	+	772	4	NNC	ENSG00000259768.7	novel	906	6	NA	NA	0	-9384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.5764535535124	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	-14	True	NA	NA	False	AATAAA	-17	NA	72665132	72812308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72713332_72713417_72745404_72745467_72811883
transcript_54412.nnic	chr16	+	1000	4	NNC	ENSG00000259768.7	novel	2409	5	NA	NA	-262	-9384	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	6.59966329107444	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	72664860	72812308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72713332_72713417_72745404_72745467_72811927
transcript_54417.nnic	chr16	+	771	4	NNC	ENSG00000259768.7	novel	2401	5	NA	NA	-25	-9384	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	4.98887651569859	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	72665097	72812308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72745404_72745467_72781727_72781820_72811927
transcript_54418.nic	chr16	+	1453	3	ISM	ENSG00000259768.7	ENST00000692742.1	1031	6	-5	41021	0	-36164	5prime_fragment	FALSE	canonical	3	11	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATCAGGCCAAGCGCGG	-19	True	NA	NA	False	ATTAAA	-9	NA	72665127	72746567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_72665334_72713332_72713417_72745404
transcript_54419.nnic	chr16	+	723	3	NNC	ENSG00000259768.7	novel	1337	4	NA	NA	-25	-9384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	72665097	72812308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72745404_72745467_72811883
transcript_54420.nnic	chr16	+	679	3	NNC	ENSG00000259768.7	novel	1337	4	NA	NA	-25	-9384	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	72665097	72812308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72745404_72745467_72811927
transcript_54421.nic	chr16	+	1398	2	ISM	ENSG00000259768.7	ENST00000563328.4	4842	5	-72	45058	-25	-36165	5prime_fragment	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACATCAGGCCAAGCGCG	NA	False	NA	NA	False	ATTAAA	-8	NA	72665097	72746566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_72665334_72745404
transcript_54423.known	chr16	+	1395	8	FSM	ENSG00000103035.11	ENST00000568717.1	1395	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	906.733833546515	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGAATGGAGACTGAT	0	True	NA	117	True	NA	NA	NA	74296819	74305888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_74296989_74299575_74299746_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_54430.known	chr16	-	734	2	FSM	ENSG00000214331.8	ENST00000568371.1	734	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGTTGAAAAATACAGC	4	True	NA	NA	False	NA	NA	NA	74368148	74367034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74367685_74368064
transcript_54431.known	chr16	+	1631	7	FSM	ENSG00000103035.11	ENST00000219313.9	1631	7	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_2	152.942708954112	8768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTAGTCGTTTTT	-6	True	NA	25	True	ATTAAA	-16	NA	74296813	74306288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_54432.known	chr16	+	931	6	FSM	ENSG00000103035.11	ENST00000568615.2	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	1788	junction_2	161.477676475728	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGGTGTCCTTCTCAAC	9	True	NA	NA	False	AATAAA	-18	NA	74296828	74304709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302
transcript_54434.known	chr16	-	9287	26	FSM	ENSG00000090863.12	ENST00000422840.7	9287	26	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_8	41.4976818629668	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTGTTAAATCTTCTC	-8	True	NA	-14	True	AATAAA	-14	NA	74607114	74447439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_54436.known	chr16	-	3033	14	FSM	ENSG00000168411.14	ENST00000571750.5	3033	14	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_13	80.9098409766322	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTGTGTCCGGTTTA	7	True	NA	NA	False	NA	NA	NA	74666870	74623428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74664623_74664746_74666785
transcript_54438.known	chr16	-	4948	13	FSM	ENSG00000168411.14	ENST00000361070.9	4948	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_12	57.680152565679	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	0	True	NA	-13	True	AATAAA	-15	NA	74666877	74621398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74666785
transcript_54442.nnic	chr16	-	601	3	NNC	ENSG00000168411.14	novel	458	2	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	92	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-20	True	NA	-13	True	AATAAA	-15	NA	74666897	74621398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_74621805_74664662_74664746_74666785
transcript_54444.nic	chr16	-	2406	3	ISM	ENSG00000168411.14	ENST00000361070.9	4948	13	-25	28955	-25	-5734	5prime_fragment	FALSE	canonical	3	245	junction_2	110.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGAATCTACTCAAGAC	-25	True	NA	NA	False	NA	NA	NA	74666902	74650353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_74652123_74660931_74661452_74666785
transcript_54445.nnic	chr16	-	478	2	NNC	ENSG00000168411.14	novel	4948	13	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-16	True	NA	-13	True	AATAAA	-15	NA	74666893	74621398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_74621769_74666785
transcript_54446.known	chr16	-	936	2	FSM	ENSG00000168411.14	ENST00000571776.1	936	2	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGGCACAATTAATTAAT	8	True	NA	NA	False	NA	NA	NA	74666869	74660599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74661452_74666785
transcript_54447.known	chr16	-	841	3	FSM	ENSG00000168411.14	ENST00000575397.5	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	19	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCACAAAGTAATGAA	45	False	NA	NA	False	AATAAA	-11	NA	74666832	74660779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74661452_74664623_74664746_74666785
transcript_54449.known	chr16	-	2477	11	FSM	ENSG00000168404.13	ENST00000308807.12	2477	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	2.37486841740758	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTGGTTTTTTAC	24	True	NA	2	True	AATAAA	-22	NA	74700862	74671854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74672539_74674959_74675101_74675354_74675405_74675612_74675765_74678898_74678981_74682650_74682787_74685485_74685584_74691276_74691464_74692341_74692417_74695297_74695760_74700452
transcript_54452.known	chr16	-	5878	26	FSM	ENSG00000103091.15	ENST00000262144.11	5878	26	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_11	29.3284844477174	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTGTTTGTTTATTTG	-10	True	NA	NA	False	AATAGA	-18	NA	74985123	74871361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74874445_74885652_74885796_74886269_74886397_74887682_74887756_74888168_74888320_74889702_74889816_74892483_74892566_74893678_74893813_74903946_74904101_74908907_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_54455.known	chr16	-	1953	17	FSM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	29.7363414023985	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGTATGGTTATTA	30	True	NA	0	True	ATTAAA	-18	NA	74985083	74908732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_54456.nic	chr16	-	1587	14	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	-52	3385	-12	0	5prime_fragment	FALSE	canonical	3	184	junction_2	14.4201535498887	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGATGAGATTCGGAAGT	-22	True	NA	-10	True	AGTAAA	-17	NA	74985135	74912117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_54460.nic	chr16	-	1401	10	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	1	12764	1	2453	5prime_fragment	FALSE	canonical	3	193	junction_7	13.5236418500672	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGATGATGTGATTT	31	True	NA	NA	False	AAAAAG	-12	NA	74985082	74921496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_54468.nnic	chr16	+	616	5	NNC	ENSG00000186187.12	novel	2046	2	NA	NA	-376	0	at_least_one_novel_splicesite	FALSE	canonical	3	42	junction_1	210.478027356777	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTATATAAAAA	NA	False	NA	-5	True	TTTAAA	-9	NA	74998647	75108004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_74998700_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_54473.known	chr16	+	964	2	FSM	ENSG00000186187.12	ENST00000568351.1	964	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATATTAAAATACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	75104783	75108590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75104890_75107732
transcript_54474.known	chr16	-	1666	2	FSM	ENSG00000247033.1	ENST00000499110.1	1666	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTAATATATAAATACAGA	6072	False	NA	NA	False	TTTAAA	-24	NA	75110712	75108600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75109882_75110327
transcript_54475.known	chr16	-	2007	11	FSM	ENSG00000166816.15	ENST00000450168.3	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	16.0374561573836	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTGGAAGTCAGCAGG	4	True	NA	-9	True	AATAAA	-29	NA	75116780	75111863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114166_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_54476.known	chr16	-	2067	11	FSM	ENSG00000166816.15	ENST00000300051.8	2067	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	26.0315193563495	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAGTCAGCAGGCAGC	17	True	NA	-5	True	AATAAA	-33	NA	75116767	75111859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114235_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_54481.known	chr16	+	3250	4	FSM	ENSG00000184517.12	ENST00000393430.6	3250	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	25.7725090401036	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTTTGTATATGAT	62	False	NA	11	True	AATAAA	-17	NA	75148581	75172236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75148663_75152908_75152967_75166769_75166897_75169252
transcript_54492.known	chr16	-	342	3	FSM	ENSG00000153774.9	ENST00000566254.1	342	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAGACACAGAAAACCCAA	74	False	NA	-17	True	AATGAA	-32	NA	75433391	75414632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75414696_75419017_75419194_75433288
transcript_54493.known	chr16	-	663	3	FSM	ENSG00000153774.9	ENST00000570103.5	663	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	489	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCTTTATTCTGCCGC	NA	False	NA	5	True	AATAAA	-44	NA	75306545	75293697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75294043_75305023_75305183_75306386
transcript_54494.known	chr16	-	1293	7	FSM	ENSG00000153774.9	ENST00000283882.4	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	87.1022706681953	4753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTCGCTCACCTTCCCT	-38	True	NA	-7	True	AATAAA	-41	NA	75433503	75293709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75294043_75305023_75305183_75395089_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_54495.known	chr16	-	1167	5	FSM	ENSG00000153774.9	ENST00000566901.5	1167	5	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	55.1333610439269	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	4	True	NA	NA	False	NA	NA	NA	75433461	75394681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_545.nic	SIRV7	-	929	5	NIC	SIRV7A	novel	949	5	NA	NA	-8	0	intron_retention	FALSE	canonical	3	2359	junction_4	2382.23271060994	1858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147965	56031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_SIRV7_-_56098_70883_70988_78841_78964_114680_114961_147608
transcript_54507.nnic	chr16	-	1030	3	ISM	ENSG00000153774.9	ENST00000564286.1	775	5	-679	6132	-646	1929	5prime_fragment	FALSE	canonical	3	744	junction_1	53	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAGAATCTGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	75434149	75412703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_75412755_75414577_75414696_75433288
transcript_54508.known	chr16	-	4959	3	FSM	ENSG00000166822.13	ENST00000357613.8	4959	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	38	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	0	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75447689_75451737_75451840_75464467
transcript_54510.known	chr16	-	2331	3	FSM	ENSG00000166822.13	ENST00000569540.5	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	46	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	14	True	NA	6	True	NA	NA	NA	75464416	75445713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75447689_75451668_75451840_75464231
transcript_54511.known	chr16	-	5028	3	FSM	ENSG00000166822.13	ENST00000561878.2	5028	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	24	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATTCTTATTAACTC	0	True	NA	-4	True	ATTAAA	-19	NA	75464689	75443053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75447689_75451668_75451840_75464467
transcript_54514.known	chr16	-	547	3	FSM	ENSG00000166822.13	ENST00000566980.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	47.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTCATGTGTACCTTT	NA	False	NA	NA	False	AAAACA	-40	NA	75464737	75447309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75447689_75451737_75451840_75464671
transcript_5452.known	chr1	+	2699	5	FSM	ENSG00000157184.7	ENST00000371486.4	2699	5	0	0	0	0	multi-exon	TRUE	canonical	3	218	junction_3	33.7120156620751	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTCTTAATTTCTTTT	0	True	NA	8	True	AATAAA	-19	NA	53196823	53214197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53213263
transcript_54522.nic	chr16	-	857	3	NIC	ENSG00000166822.13	novel	2331	3	NA	NA	-15	68	combination_of_known_junctions	FALSE	canonical	3	40	junction_2	32	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTTGGCAAACTCTT	-1	True	NA	-29	True	ATTAAA	-18	NA	75464431	75447133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_75447689_75451737_75451840_75464231
transcript_5453.known	chr1	-	490	1	FSM	ENSG00000162384.14	ENST00000602807.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGTCTTGGAAAGCTT	47	False	NA	0	True	ATTAAA	-21	NA	53220576	53220086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53220100_53220600
transcript_54531.nnic	chr16	-	870	3	NIC	ENSG00000183196.10	novel	2000	4	NA	NA	-6	57	combination_of_known_splicesites	FALSE	canonical	2	15	junction_1	9	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTGTGGTGGTTT	-5	True	NA	-4	True	AATAAA	-23	NA	75495390	75473123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_75473468_75481816_75481892_75494939
transcript_54532.known	chr16	-	1869	11	FSM	ENSG00000065457.11	ENST00000307921.7	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	18.1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGACTTCCATTGTGT	-25	True	NA	NA	False	NA	NA	NA	75623300	75600001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402_75622465_75623237
transcript_54535.known	chr16	-	5757	10	FSM	ENSG00000065457.11	ENST00000564657.2	5757	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	9.11652955411823	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTTTTGTTTATCC	-6	True	NA	-26	True	AATAAA	-16	NA	75623281	75596867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402
transcript_5454.known	chr1	-	1102	8	FSM	ENSG00000162384.14	ENST00000294360.5	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	29.2463149606153	2894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTTATCTTCAGTTG	-11	True	NA	-9	True	ATTAAA	-18	NA	53220634	53214098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260_53220345_53220569
transcript_54541.known	chr16	-	4247	7	FSM	ENSG00000205084.12	ENST00000258173.11	4247	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	9.17726659862414	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTGGTTTATTTCCT	-6	True	NA	-2	True	TATAAA	-17	NA	75556252	75536740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555803_75555974_75556070
transcript_54550.known	chr16	+	668	1	FSM	ENSG00000276408.1	ENST00000621911.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACTGTGTGTGTGCCTTT	990	False	NA	NA	False	GATAAA	-18	NA	75556391	75557059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75556400_75557100
transcript_54551.known	chr16	+	974	4	FSM	ENSG00000034713.8	ENST00000037243.7	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_1	39.1606378338703	7127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	-10	True	NA	NA	False	AATAAA	-19	NA	75566378	75577881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75566521_75566851_75566908_75568036_75568210_75577278
transcript_54552.known	chr16	+	791	3	FSM	ENSG00000034713.8	ENST00000563744.1	791	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	306.5	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	0	True	NA	NA	False	AATAAA	-19	NA	75566388	75577881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75566521_75566851_75566908_75577278
transcript_54553.known	chr16	+	2131	3	FSM	ENSG00000166848.7	ENST00000300086.5	2131	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	13	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCGTCAATAAGTGTTTT	-3	True	NA	55	True	AATAAA	-18	NA	75647772	75657432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75648553_75654272_75654398_75656206
transcript_54554.known	chr16	+	639	3	FSM	ENSG00000166848.7	ENST00000569234.1	639	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	84	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGAGGCTACTTCCG	199	False	NA	NA	False	NA	NA	NA	75648395	75656433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75648683_75654272_75654398_75656206
transcript_54573.known	chr16	-	1991	14	FSM	ENSG00000065427.15	ENST00000302445.8	1991	14	0	0	0	0	multi-exon	FALSE	canonical	3	751	junction_13	107.518541128452	5277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTCTCTTCTCTTT	-7	True	NA	-49	True	ATTAAA	-30	NA	75647665	75627723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75647577
transcript_54574.known	chr16	-	2421	15	FSM	ENSG00000065427.15	ENST00000319410.9	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_14	281.999963815311	2715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCTTTCTGGTGGTGG	-7	True	NA	NA	False	AGTAAA	-3	NA	75647665	75627473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75644282_75644463_75647577
transcript_54575.known	chr16	-	1942	14	FSM	ENSG00000065427.15	ENST00000564578.5	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	357.079707011983	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACAAGGAATTAAAAAT	10	True	NA	-95	True	NA	NA	NA	75647648	75627769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75644282_75644463_75647577
transcript_54576.known	chr16	-	644	2	FSM	ENSG00000065427.15	ENST00000566772.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTGCTCTTTCACTC	NA	False	NA	NA	False	AATAAA	-17	NA	75636073	75635323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75635806_75635911
transcript_54577.known	chr16	-	569	1	FSM	ENSG00000244485.1	ENST00000478088.1	569	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGATCCTACTCTCTTA	31	False	NA	NA	False	NA	NA	NA	76235623	76235054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_76235100_76235600
transcript_54580.nnic	chr16	+	577	3	NNC	ENSG00000152910.19	novel	4723	23	NA	NA	-69456	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGGTGTAGTCAATAT	NA	False	NA	NA	False	AATAAA	-15	NA	76487919	76495198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_76487964_76489639_76489884_76494909
transcript_54581.known	chr16	+	5813	6	FSM	ENSG00000103111.15	ENST00000248248.8	5813	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	9.21737489744233	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTACTGTGCTGGCCAT	-9	True	NA	14	True	AATAAA	-15	NA	77191189	77202398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77191259_77191475_77191634_77193450_77193778_77194334_77195155_77195534_77195683_77198107
transcript_54585.known	chr16	+	1057	11	FSM	ENSG00000205078.6	ENST00000378644.5	1057	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.1720256084048	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAACAGGGGCCGGAGGG	-18	True	NA	NA	False	NA	NA	NA	77199407	77213215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77199513_77206440_77206501_77208209_77208270_77208464_77208540_77209096_77209145_77209416_77209472_77211212_77211277_77212129_77212200_77212281_77212370_77212573_77212647_77212856
transcript_54589.known	chr16	+	652	3	FSM	ENSG00000260922.2	ENST00000561672.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACTCGAGTGGTAGTT	53	False	NA	NA	False	AGTAAA	-26	NA	77234876	77290934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77234950_77289275_77289456_77290535
transcript_54590.known	chr16	+	213	2	FSM	ENSG00000205078.6	ENST00000563157.1	213	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCGTTCTCCGCGGAGTC	126	False	NA	25	True	AATAAA	-21	NA	77212592	77213005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77212647_77212846
transcript_54594.nnic	chr16	+	1283	6	NNC	ENSG00000140876.11	novel	899	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	40.485058972416	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATGTGGCATTTACCT	-2	True	NA	NA	False	AATAAA	-16	NA	77722477	77742257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_77722618_77725430_77725585_77735827_77735987_77736649_77736744_77737393_77737454_77741581
transcript_54596.known	chr16	+	899	5	FSM	ENSG00000140876.11	ENST00000564085.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	38.989581941847	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATTCACGAGGATT	-11	True	NA	NA	False	CATAAA	-41	NA	77722513	77741969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77736649_77736744_77741581
transcript_546.known	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3450	junction_1	1852.2667700685	2677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
transcript_54601.known	chr16	+	1096	4	FSM	ENSG00000140876.11	ENST00000268533.9	1096	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	38.8529993122224	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGGCATTTACCTTAT	-11	True	NA	NA	False	AATAAA	-19	NA	77722513	77742260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77741581
transcript_54607.known	chr16	+	678	3	FSM	ENSG00000140876.11	ENST00000568787.5	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	32	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAGATGCTTCAGAATT	-9	True	NA	NA	False	NA	NA	NA	77722515	77736249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77725430_77725585_77735827
transcript_54608.known	chr16	+	930	3	FSM	ENSG00000140876.11	ENST00000437314.3	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	41.5	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGGCATTTACCTT	-6	True	NA	NA	False	AATAAA	-17	NA	77722518	77742258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77725430_77725585_77741581
transcript_5461.known	chr1	-	656	5	FSM	ENSG00000162385.11	ENST00000371470.8	656	5	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_2	98.4793760134578	15495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAACTCTTCTCAATT	-2	True	NA	-20	True	AATAAA	-44	NA	53238518	53226899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53227145_53228871_53228955_53233541_53233653_53235576_53235636_53238360
transcript_54612.known	chr16	+	316	2	FSM	ENSG00000140876.11	ENST00000563839.1	316	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGCCTTTATCATTTT	20	True	NA	NA	False	NA	NA	NA	77722544	77741824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77741581
transcript_54614.known	chr16	+	3791	9	FSM	ENSG00000171724.3	ENST00000302536.3	3791	9	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	18.0238557195734	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATCTGCTATTCCAC	0	True	NA	24	True	AATAAA	-24	NA	77788563	77980107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77884607_77884803_77971849_77971934_77977596
transcript_54619.known	chr16	+	710	6	FSM	ENSG00000186153.18	ENST00000355860.7	710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	35.7513636103576	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACATCTTCTTTTGTGG	-7	True	NA	NA	False	AATAAA	-21	NA	78099678	78278696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78164182_78164290_78278602
transcript_5462.known	chr1	-	500	4	FSM	ENSG00000162385.11	ENST00000371466.4	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	500.720369956015	4739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATTTTATAAAGA	17	True	NA	-46	True	AATAAA	-18	NA	53238499	53226925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53227145_53228871_53228955_53235576_53235636_53238360
transcript_54622.known	chr16	+	448	4	FSM	ENSG00000186153.18	ENST00000565562.5	448	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	38.9101529166874	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGTTCGGGGCCACTAC	48	False	NA	NA	False	GATAAA	-13	NA	78099733	78111992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78111819
transcript_54625.nic	chr16	+	877	3	ISM	ENSG00000186153.18	ENST00000565562.5	448	4	-86	1641	-6	-1641	5prime_fragment	FALSE	canonical	3	93	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAGGGAATGC	-38	True	NA	NA	False	NA	NA	NA	78099647	78110351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_78099886_78108422_78108488_78109777
transcript_54626.nic	chr16	+	528	2	ISM	ENSG00000186153.18	ENST00000565562.5	448	4	-324	3518	10	-3518	5prime_fragment	FALSE	canonical	3	93	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTGGCAGGAGGTTTGTA	-11	True	NA	22	True	AAAAAG	-5	NA	78099409	78108474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_78099886_78108422
transcript_54627.known	chr16	+	525	1	FSM	ENSG00000186153.18	ENST00000569818.1	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCAGCTCCCTCCTGC	-11	True	NA	23	True	AATAAA	-19	NA	78099674	78100199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78099700_78100200
transcript_54628.known	chr16	+	450	2	FSM	ENSG00000186153.18	ENST00000620008.1	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAACAGCTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	78424870	78432752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78425056_78432487
transcript_54629.known	chr16	-	1799	2	FSM	ENSG00000287106.1	ENST00000669173.1	1799	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTTGGATTTAATAAATG	NA	False	NA	NA	False	NA	NA	NA	78275607	78273496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_78275129_78275440
transcript_5463.known	chr1	-	695	3	FSM	ENSG00000162385.11	ENST00000495868.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_2	121.5	2288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATTTTTATTATTTTAT	4681	False	NA	41	True	AATAAA	-13	NA	53233939	53226930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53227145_53228871_53228955_53233541
transcript_54631.known	chr16	-	2669	2	FSM	ENSG00000178573.7	ENST00000326043.5	2669	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCTGTGTGATTTTTT	-1	True	NA	NA	False	AATACA	-17	NA	79600737	79593837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_79594554_79598784
transcript_54634.known	chr16	-	722	6	FSM	ENSG00000261390.7	ENST00000567993.7	727	6	5	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.8	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCCTGGCCTCCTGCT	-8	True	NA	NA	False	AATAAA	-30	NA	79770561	79721303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_79721622_79740146_79740238_79751213_79751277_79757650_79757716_79769152_79769223_79770446
transcript_54636.known	chr16	-	592	5	FSM	ENSG00000261390.7	ENST00000670969.2	639	5	47	0	39	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCCTGGCCTCCTGCT	-6	True	NA	NA	False	AATAAA	-30	NA	79770522	79721303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_79721622_79751213_79751277_79757650_79757716_79769152_79769223_79770446
transcript_54637.known	chr16	-	662	5	FSM	ENSG00000261390.7	ENST00000669528.1	662	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCCTGGCCTCCTGCT	-13	True	NA	NA	False	AATAAA	-30	NA	79770566	79721303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_79721622_79740146_79740238_79751213_79751277_79769152_79769223_79770446
transcript_54639.known	chr16	-	659	4	FSM	ENSG00000261390.7	ENST00000657613.1	659	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGGCCTCCTGCTTAG	NA	False	NA	NA	False	AATAAA	-33	NA	79770651	79721300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_79721622_79751213_79751277_79769152_79769223_79770446
transcript_54644.known	chr16	+	628	4	FSM	ENSG00000168589.15	ENST00000305904.11	628	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGCTCCTTGTGATAA	-13	True	NA	NA	False	AATACA	-22	NA	80540992	80550811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_80541080_80543275_80543352_80549483_80549652_80550514
transcript_54648.nnic	chr16	-	688	3	FSM	ENSG00000103121.9	ENST00000565108.5	399	3	-23	-266	-12	17	multi-exon	FALSE	canonical	3	70	junction_1	560.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTCTTTTGGCATTAGA	221	False	NA	7	True	AATAAA	-32	NA	81006909	80975783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80997313_80997430_81006733
transcript_54649.known	chr16	-	1339	4	FSM	ENSG00000286221.1	ENST00000652621.1	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	561.442784262119	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTGTAAAACCTTCT	-29	True	NA	NA	False	AATAAA	-21	NA	81006880	80829785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80830758_80840118_80840223_80997313_80997430_81006733
transcript_5466.known	chr1	+	1295	3	FSM	ENSG00000226754.2	ENST00000458151.2	1295	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	-1	True	NA	NA	False	AAAAAG	-22	NA	53238549	53242837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53239346_53241846_53241946_53242437
transcript_54663.known	chr16	-	573	6	FSM	ENSG00000103121.9	ENST00000562713.3	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	395.90221014791	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAGAGGAATCCGAAAA	-7	True	NA	NA	False	AAGAAA	-10	NA	81006858	80976116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81001247_81001335_81006733
transcript_54669.known	chr16	-	1560	5	FSM	ENSG00000140905.11	ENST00000315467.9	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	2157	junction_3	47.7879430400598	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGACTCTGATAGTATT	-8	True	NA	-6	True	AATAAA	-34	NA	81096395	81081944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81082964_81084462_81084595_81087600_81087665_81090600_81090681_81096130
transcript_54679.known	chr16	-	975	4	FSM	ENSG00000140905.11	ENST00000564386.6	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1041.94508279254	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCGTTAATCATGTTT	122	False	NA	-20	True	AATAAA	-4	NA	81096265	81082335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81082964_81084462_81084595_81090600_81090681_81096130
transcript_5468.known	chr1	+	567	3	FSM	ENSG00000225675.2	ENST00000445039.2	567	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTACTTCCTTTAAGT	3	True	NA	NA	False	NA	NA	NA	53328232	53336509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53328376_53331167_53331252_53336169
transcript_54682.known	chr16	-	612	3	FSM	ENSG00000103121.9	ENST00000569187.5	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	399	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTCTCCTTTCTCT	233	False	NA	-13	True	AATAAA	-12	NA	81006897	80975803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80981805_80981878_81006733
transcript_54686.known	chr16	-	403	3	FSM	ENSG00000140905.11	ENST00000561801.2	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1115.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTCTTAAATTAGTGG	130	False	NA	NA	False	AATAAA	-27	NA	81096257	81082819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81082964_81084462_81084595_81096130
transcript_54688.known	chr16	-	766	4	FSM	ENSG00000103121.9	ENST00000486645.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	498.469880957939	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	235	False	NA	-11	True	AATAAA	-14	NA	81006895	80975801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80980769_80980880_80997313_80997430_81006733
transcript_54689.known	chr16	-	801	5	FSM	ENSG00000103121.9	ENST00000570086.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	522.118281618256	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATTTTTTTCTCCTTTC	-24	True	NA	-16	True	AATAAA	-9	NA	81006875	80975806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80981805_80981878_80996922_80997021_80997313_80997430_81006733
transcript_54690.known	chr16	-	399	3	FSM	ENSG00000103121.9	ENST00000565108.5	399	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	560.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-35	True	NA	NA	False	AATAAA	-43	NA	81006886	80976049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80997313_80997430_81006733
transcript_54691.known	chr16	+	3928	11	FSM	ENSG00000166451.14	ENST00000305850.10	3928	11	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	456.452943905503	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGTGGTCTTTTGC	-11	True	NA	28	True	AATAAA	-19	NA	81007213	81031485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_54692.known	chr16	+	971	10	FSM	ENSG00000166451.14	ENST00000428963.6	971	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	475.671325472267	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTTAAGCACAGCTCC	19	True	NA	NA	False	GATAAA	-13	NA	81007243	81028660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_54693.known	chr16	+	1699	10	FSM	ENSG00000166451.14	ENST00000439957.7	1699	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	449.772782141778	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACATCAGTTAATTTTG	-18	True	NA	1	True	AATAAA	-14	NA	81007206	81029309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_54694.known	chr16	+	461	4	FSM	ENSG00000166451.14	ENST00000562943.1	461	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	481.793178310638	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTATAATTGTATTGT	NA	False	NA	14	True	AATAAA	-16	NA	81017754	81022874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81017835_81020099_81020277_81022596_81022653_81022726
transcript_54695.known	chr16	-	438	4	FSM	ENSG00000103121.9	ENST00000562828.5	438	4	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	397.05611134392	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGCTAGGACGACAGG	-41	True	NA	NA	False	NA	NA	NA	81006892	80980788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80980880_80981805_80981878_80997313_80997430_81006733
transcript_54699.known	chr16	-	1488	7	FSM	ENSG00000166473.17	ENST00000531391.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.77123616632825	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTCTGGGATCTGCT	-3	True	NA	0	True	AATAAA	-16	NA	81181329	81170288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81170806_81170942_81171075_81174719_81174915_81175604_81175751_81177806_81177984_81179644_81179787_81181150
transcript_54700.nic	chr16	-	1758	6	NIC	ENSG00000166473.17	novel	1608	6	NA	NA	-61	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.6	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGTGATGGGCTCTCA	NA	False	NA	NA	False	TATAAA	-18	NA	81141560	81123017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_81123785_81127760_81128067_81130458_81130645_81133562_81133701_81137436_81137534_81141296
transcript_54703.known	chr16	+	8666	33	FSM	ENSG00000197943.11	ENST00000564138.6	8666	33	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_19	12.5298082088275	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAATCTGCCCAGAAC	0	True	NA	NA	False	AATAAA	-18	NA	81779290	81962685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81779425_81785942_81786183_81854443_81854588_81858262_81858357_81859115_81859164_81869213_81869299_81870851_81870936_81880909_81880954_81883268_81883342_81889171_81889274_81891471_81891591_81893708_81893795_81895806_81895928_81900611_81900781_81905402_81905508_81907684_81907775_81908415_81908592_81910519_81910721_81912596_81912717_81919483_81919665_81921197_81921270_81923484_81923595_81927081_81927179_81928557_81928625_81931496_81931655_81934428_81934532_81936168_81936379_81937757_81937904_81938800_81938916_81939891_81940060_81946174_81946264_81956694_81956880_81957955
transcript_54704.nnic	chr16	+	885	5	NNC	ENSG00000197943.11	novel	8666	33	NA	NA	991	1564	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	44.4100213915733	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTAAGCCTTCTGTTGC	NA	False	NA	5	True	AATAAA	-18	NA	81939618	81958294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_81939723_81939891_81940060_81946174_81946264_81956694_81956880_81957955
transcript_54708.nnic	chr16	-	763	4	NIC	ENSG00000261235.1	novel	566	3	NA	NA	-123	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGTCTCATTTCTCC	NA	False	NA	-3	True	AATAAA	-14	NA	82139754	82044335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_82044606_82052292_82052459_82063092_82063254_82139588
transcript_54713.nnic	chr16	-	565	3	NIC	ENSG00000261235.1	novel	829	4	NA	NA	-123	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCATCTATCAGGAATA	NA	False	NA	-38	True	NA	NA	NA	82139754	82044370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_82044609_82063092_82063254_82139588
transcript_54715.known	chr16	-	566	3	FSM	ENSG00000261235.1	ENST00000561826.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGTCTCATTTCTCC	NA	False	NA	-3	True	AATAAA	-14	NA	82063222	82044335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_82044606_82052292_82052459_82063092
transcript_54724.known	chr16	-	617	5	FSM	ENSG00000135698.10	ENST00000563504.5	617	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	326.172117140629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTATCATTTTAGAAACAT	9	True	NA	-36	True	NA	NA	NA	82170195	82148615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164114_82164195_82170092
transcript_54730.known	chr16	-	1101	5	FSM	ENSG00000135698.10	ENST00000258169.9	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_2	17.5356779167502	3983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATTTTCTTGTAC	-20	True	NA	-8	True	AATAAA	-17	NA	82170224	82148161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
transcript_54731.known	chr16	-	392	2	FSM	ENSG00000135698.10	ENST00000569021.1	392	2	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCCTTTTTTACATTG	7	True	NA	NA	False	NA	NA	NA	82170197	82163875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_82164195_82170124
transcript_54732.known	chr16	+	7876	14	FSM	ENSG00000140945.17	ENST00000567109.6	7876	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.59815863493123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTTTAGTCTTAGA	1	True	NA	NA	False	AATAAA	-20	NA	82626968	83800640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_82627138_82858361_82858474_83032009_83032219_83125384_83125502_83217344_83217498_83344861_83345007_83486476_83486656_83602453_83602595_83670789_83670973_83678207_83678462_83748107_83748251_83779967_83780202_83783253_83783473_83795022
transcript_54733.known	chr16	+	831	5	FSM	ENSG00000140945.17	ENST00000431540.7	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.49106001094224	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATCACATTATTGGGT	2	True	NA	NA	False	AATAAA	-18	NA	82626969	83181094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_82627138_82858361_82858474_83032009_83032219_83125384_83125502_83180869
transcript_5474.known	chr1	-	369	3	FSM	ENSG00000236253.7	ENST00000566461.1	369	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAAGTCTGCCCAGATT	NA	False	NA	-17	True	AATAAA	-3	NA	53417666	53413162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53413269_53415400_53415525_53417527
transcript_54740.known	chr16	-	686	2	FSM	ENSG00000260788.7	ENST00000569165.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGGATTTACAACTGCT	-2	True	NA	NA	False	NA	NA	NA	83772917	83735341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_83735919_83772808
transcript_54749.known	chr16	+	1922	6	FSM	ENSG00000140961.14	ENST00000393306.6	1922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.00665927567458	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATGCGTCTGAGGACTC	0	True	NA	2	True	AATAAA	-17	NA	83953239	83966332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_83953371_83957639_83957739_83959259_83959397_83960568_83960761_83960980_83961073_83965061
transcript_54752.known	chr16	-	4377	23	FSM	ENSG00000140943.18	ENST00000343411.8	4377	23	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_5	23.8124993221405	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTAACGGACTCT	-22	True	NA	-15	True	AATAAA	-27	NA	84116942	84053762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84054646_84056004_84056136_84059301_84059429_84060681_84060814_84063304_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_54758.known	chr16	+	521	1	FSM	ENSG00000260018.1	ENST00000565382.1	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTGGGTGACTTAGAT	3	True	NA	23	True	AATAAA	-36	NA	84117050	84117571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84117000_84117600
transcript_5476.known	chr1	+	1910	4	FSM	ENSG00000143006.7	ENST00000371445.3	1910	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGGAAGGCTTATTC	2	True	NA	NA	False	AATAAA	-15	NA	53459398	53467488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53460031_53461472_53461646_53464636_53464848_53466594
transcript_54760.known	chr16	-	3648	6	FSM	ENSG00000103160.12	ENST00000219439.9	3648	6	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_5	25.6093732840146	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATAACTATGTGCCT	-14	True	NA	-12	True	ATTAAA	-23	NA	84145177	84122140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84124729_84129547_84129776_84129985_84130432_84131101_84131328_84135543_84135606_84145079
transcript_54761.known	chr16	-	1493	7	FSM	ENSG00000103160.12	ENST00000434463.7	1493	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	113.710768570478	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGCTGCACTTCA	-6	True	NA	NA	False	NA	NA	NA	84145169	84124122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84124729_84129547_84129776_84129985_84130172_84130336_84130432_84131101_84131328_84135543_84135606_84145079
transcript_54762.known	chr16	-	542	3	FSM	ENSG00000103160.12	ENST00000567294.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	37	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTTTCTTACTGCT	18	False	84145210	3	True	AATAAA	-30	NA	84145192	84130960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84131328_84135543_84135606_84145079
transcript_5477.known	chr1	-	4552	18	FSM	ENSG00000058804.12	ENST00000371429.4	4552	18	0	0	0	0	multi-exon	TRUE	canonical	3	461	junction_7	54.5177029119519	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAACAGTTAATTGAAATA	-5	True	NA	-18	True	AATAAA	-18	NA	53838296	53765477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_54773.known	chr16	-	5013	8	FSM	ENSG00000140950.16	ENST00000343629.11	5013	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.7851343953503	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAAAACTATATTTTG	-12	True	NA	NA	False	ATTAAA	-20	NA	84504659	84476354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_54779.known	chr16	-	437	2	FSM	ENSG00000140950.16	ENST00000565701.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAACGCATCCCTCCCC	18	True	NA	NA	False	NA	NA	NA	84504629	84497703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84498112_84504600
transcript_54780.known	chr16	-	1842	4	FSM	ENSG00000103187.8	ENST00000262428.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_1	84.2060963747083	1439	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-2	True	NA	-20	True	AATAAA	-24	NA	84618078	84565595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84566956_84590104_84590263_84617500_84617584_84617837
transcript_54782.known	chr16	+	6488	2	FSM	ENSG00000135686.13	ENST00000325279.4	6488	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGACTTCCTTTTGGTGTT	NA	False	NA	22	True	AATATA	-14	NA	84659538	84667686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84659918_84661577
transcript_54784.known	chr16	+	2618	3	FSM	ENSG00000135686.13	ENST00000564159.1	2618	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	60.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATCTTGCTTGAATAAC	9383	False	NA	17	True	ATTAAA	-17	NA	84657902	84662309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84659631_84659759_84659918_84661577
transcript_54799.known	chr16	+	888	5	FSM	ENSG00000103194.16	ENST00000562743.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	706.572492742252	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCCGGGGCTGATTTT	-9	True	NA	NA	False	NA	NA	NA	84699985	84745211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733052_84733106_84733434_84733504_84740308_84740370_84744632
transcript_54801.known	chr16	+	2717	15	FSM	ENSG00000103194.16	ENST00000570191.5	2717	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	496.240072126056	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGGGCTAGAATGAAA	9	True	NA	NA	False	NA	NA	NA	84700003	84779194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84704739_84704861_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_54802.known	chr16	+	3328	14	FSM	ENSG00000103194.16	ENST00000219473.12	3328	14	0	0	0	0	multi-exon	FALSE	canonical	3	1206	junction_4	163.701163728048	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	5	True	NA	31	True	AATAAA	-21	NA	84699999	84779922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_54803.known	chr16	+	1315	12	FSM	ENSG00000103194.16	ENST00000563048.5	1315	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	421.117423407677	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTGAAACCAACTGCTG	9	True	NA	NA	False	NA	NA	NA	84700003	84779015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733434_84733504_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_54804.known	chr16	+	502	5	FSM	ENSG00000103194.16	ENST00000570053.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	675.109991038497	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACGCACAGTCCAGGAT	45	False	NA	NA	False	NA	NA	NA	84700039	84768275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733434_84733504_84762988_84763089_84764085_84764264_84768192
transcript_54805.known	chr16	+	569	5	FSM	ENSG00000103194.16	ENST00000562283.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	737.203966009408	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCGTAAAAAGAAGAAAAAG	9	True	NA	NA	False	NA	NA	NA	84700003	84744923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733052_84733106_84733447_84733504_84740308_84740370_84744632
transcript_54806.known	chr16	+	1123	9	FSM	ENSG00000103196.12	ENST00000563066.5	1123	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.38570119821221	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCCCTCAGGTAACTAC	NA	False	NA	NA	False	NA	NA	NA	84842002	84873110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84842266_84845785_84845905_84849384_84849518_84850567_84850684_84854728_84854830_84866896_84867041_84868850_84868912_84872441_84872509_84872991
transcript_54808.known	chr16	+	7381	12	FSM	ENSG00000135709.14	ENST00000538274.6	7360	12	-31	10	-31	2	multi-exon	FALSE	canonical	2	5	junction_8	7.61360244225822	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTCTGTTTAA	2	False	NA	NA	False	AATAAA	-9	NA	85027750	85094220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924_85079004_85081314_85081393_85086643_85086725_85087071_85087167_85088275
transcript_54809.nic	chr16	+	1915	8	ISM	ENSG00000135709.14	ENST00000538274.6	7360	12	-15	14478	-15	-2	5prime_fragment	FALSE	canonical	3	18	junction_2	3.18157963590287	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATGTTTTAGAGGGT	-26	True	NA	5	True	AATACA	-14	NA	85027766	85079752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_85027859_85066899_85067401_85071782_85071883_85072924_85072999_85075843_85075915_85077424_85077633_85078414_85078456_85078924
transcript_54815.known	chr16	-	601	3	FSM	ENSG00000270124.1	ENST00000602862.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTGTCTACTGTCT	3	True	NA	NA	False	NA	NA	NA	85583571	85580008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85580230_85582018_85582170_85583342
transcript_54821.known	chr16	-	2628	5	FSM	ENSG00000131153.9	ENST00000253462.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	55.9598070046708	1566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGAAGATTTTATTTTT	12	True	NA	-10	True	CATAAA	-23	NA	85688954	85676197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
transcript_54822.known	chr16	-	744	4	FSM	ENSG00000154102.11	ENST00000602675.5	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	17.7826382244655	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	184	False	NA	92	True	AATAAA	-17	NA	85750951	85707516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85708067_85710163_85710286_85735189_85735236_85750925
transcript_54823.known	chr16	-	911	4	FSM	ENSG00000154102.11	ENST00000284245.9	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	11.0855260988773	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	39	False	85751117	92	True	AATAAA	-17	NA	85751096	85707516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85708067_85710163_85710308_85735189_85735236_85750925
transcript_54833.known	chr16	+	716	5	FSM	ENSG00000131143.10	ENST00000561569.5	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2370.22629457611	10248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	7	True	NA	31	True	AATAAA	-19	NA	85799696	85807002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85799753_85801183_85801279_85804936_85805105_85805732_85805865_85806737
transcript_54836.known	chr16	+	873	5	FSM	ENSG00000131143.10	ENST00000562336.5	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	2295.4336600085	5811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	3	True	NA	-7	True	AATGAA	-6	NA	85799692	85807044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85799885_85801204_85801279_85804936_85805105_85805732_85805865_85806737
transcript_5484.nic	chr1	-	2395	17	NIC	ENSG00000058804.12	novel	4552	18	NA	NA	-39	-2242	combination_of_known_junctions	FALSE	canonical	3	37	junction_16	134.460902774747	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCATTGATGGCAGTC	-2	True	NA	-16	True	AATAAA	-18	NA	53838502	53767719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53838204
transcript_54843.known	chr16	+	566	3	FSM	ENSG00000131143.10	ENST00000563774.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2605.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGCTGGGTAAGACATA	6	True	NA	NA	False	NA	NA	NA	85799695	85805350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85799753_85801183_85801279_85804936
transcript_54844.known	chr16	-	1966	5	FSM	ENSG00000131148.9	ENST00000253457.8	1966	5	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_3	32.2993807990184	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTCTTCCCCTTTCTTC	6227	False	85799559	0	True	AATAAA	-24	NA	85799544	85778623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85779868_85780378_85780474_85781210_85781281_85788973_85789051_85799064
transcript_54845.known	chr16	+	1235	3	FSM	ENSG00000131143.10	ENST00000564648.1	1235	3	0	0	0	0	multi-exon	FALSE	canonical	3	5238	junction_1	342	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCACTGCTAATAAATGA	920	False	NA	-4	True	NA	NA	NA	85801201	85806967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85801279_85804936_85805865_85806737
transcript_54846.known	chr16	+	1481	3	FSM	ENSG00000131143.10	ENST00000564903.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	5226	junction_2	6	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCACTGCTAATAAATGAC	920	False	NA	-3	True	NA	NA	NA	85801201	85806968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85801279_85804936_85805105_85805732
transcript_54847.nnic	chr16	+	694	2	Antisense	novelGene_ENSG00000268754.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGGCTCTTC	NA	False	NA	20	True	AATAAA	-22	NA	86278398	86281241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_86278682_86280830
transcript_54850.known	chr16	-	845	6	FSM	ENSG00000103248.19	ENST00000568037.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.44580418759451	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGACCATGTCTTATG	36	False	NA	-7	True	AATAAA	-15	NA	86555178	86547145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_86547569_86548034_86548112_86548463_86548578_86552178_86552293_86554644_86554752_86555168
transcript_54854.known	chr16	+	1980	1	FSM	ENSG00000280278.1	ENST00000624773.1	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAACCTTAACTCAAAT	1229	False	NA	NA	False	AATAAA	-21	NA	86555319	86557299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_86555300_86557300
transcript_54856.nic	chr16	-	1155	7	NIC	ENSG00000260456.7	novel	1113	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	25.7601112834035	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	0	True	NA	-13	True	AATAAA	-22	NA	87317430	87302813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_87303076_87305718_87305906_87310296_87310334_87311149_87311297_87314970_87315097_87315771_87315824_87317086
transcript_54858.nnic	chr16	-	1118	6	NIC	ENSG00000260456.7	novel	1113	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	25.9923065540556	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	0	True	NA	-13	True	AATAAA	-22	NA	87317430	87302813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_87303076_87305718_87305906_87311149_87311297_87314970_87315097_87315771_87315824_87317086
transcript_54860.known	chr16	-	974	5	FSM	ENSG00000260456.7	ENST00000618367.4	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	13.7545447034789	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGACCTCTGATTTC	10	False	NA	0	True	AATAAA	-35	NA	87317420	87302800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317086
transcript_54862.known	chr16	-	1113	7	FSM	ENSG00000260456.7	ENST00000567970.2	1113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	27.3704016939629	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	-10	True	NA	-13	True	AATAAA	-22	NA	87317392	87302813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87303076_87305718_87305906_87310296_87310334_87311149_87311297_87314970_87315097_87315771_87315824_87317090
transcript_54864.known	chr16	+	401	2	FSM	ENSG00000270006.3	ENST00000602282.3	417	2	16	0	9	0	multi-exon	FALSE	canonical	3	15	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGTTCTTTAAGTTA	0	True	NA	11	True	AGTAAA	-22	NA	87317508	87318043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87317723_87317856
transcript_54865.nnic	chr16	-	1983	12	NNC	ENSG00000104731.14	novel	4572	17	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	33.1757155035661	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCTAATCTTTAGTTT	-35	True	NA	-7	True	AATAAA	-18	NA	87765992	87698145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_87698463_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_54868.known	chr16	-	1924	12	FSM	ENSG00000104731.14	ENST00000270583.10	1924	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	17.0453939392862	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-29	True	NA	NA	False	AATAAA	-18	NA	87765986	87707811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_54871.known	chr16	-	1757	11	FSM	ENSG00000104731.14	ENST00000562155.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	43.7671109396085	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATAAATTGGACTTG	28	True	NA	NA	False	NA	NA	NA	87765929	87707839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87761948_87762041_87765791
transcript_54875.known	chr16	-	1663	10	FSM	ENSG00000104731.14	ENST00000353170.9	1663	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	47.9214892903222	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	9239	False	NA	NA	False	AATAAA	-18	NA	87765899	87707811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87765791
transcript_54881.known	chr16	+	1030	2	FSM	ENSG00000154118.13	ENST00000301008.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGCTCTAGTCCTCCC	-11	True	NA	3	True	AATAAA	-13	NA	87602886	87604627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87603529_87604239
transcript_54890.nic	chr16	+	1036	3	ISM	ENSG00000172530.21	ENST00000393207.5	2438	14	95152	0	-5903	0	3prime_fragment	FALSE	canonical	3	32	junction_1	47	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	NA	False	NA	17	True	AATAAA	-18	NA	88065169	88077318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_88065333_88072068_88072213_88076589
transcript_54891.nic	chr16	+	680	2	ISM	ENSG00000172530.21	ENST00000412691.5	586	5	-41	31503	-28	0	5prime_fragment	FALSE	canonical	2	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCTGTCATCATT	916	False	NA	20	True	ATTAAA	-21	NA	87951403	87952748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_87951516_87952180
transcript_54892.known	chr16	+	502	1	FSM	ENSG00000172530.21	ENST00000612301.1	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCTGTCATCATT	615	False	NA	20	True	ATTAAA	-21	NA	87952246	87952748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87952200_87952700
transcript_54893.known	chr16	+	498	3	FSM	ENSG00000260420.3	ENST00000569362.2	498	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGCGTGAATTTTTACA	NA	False	NA	NA	False	AATAAA	-27	NA	88194280	88195217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88194512_88194749_88194866_88195066
transcript_54899.nic	chr16	+	758	2	ISM	ENSG00000158545.16	ENST00000569435.5	694	6	-91	22115	-16	-22115	5prime_fragment	FALSE	canonical	3	235	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGACGATGATGGAGAAAT	NA	False	NA	NA	False	AAAAAG	-4	NA	88570386	88577687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_88570567_88577109
transcript_54900.known	chr16	+	3705	18	FSM	ENSG00000158545.16	ENST00000301011.10	3705	18	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	28.5202532297779	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTTGCCCTCGTGGT	-1	True	NA	15	True	AATAAA	-16	NA	88570402	88631964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_54901.known	chr16	+	3211	19	FSM	ENSG00000158545.16	ENST00000452588.6	3211	19	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	62.0787035310723	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTAAAAAAGAAAAAA	-1	True	NA	NA	False	NA	NA	NA	88570402	88631398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88587541_88587614_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_54903.known	chr16	+	1060	3	FSM	ENSG00000124391.5	ENST00000244241.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGAGGCCAACATTCA	0	True	NA	13	True	ATTAAA	-13	NA	88638571	88640468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88638648_88638980_88639310_88639813
transcript_54905.known	chr16	-	692	6	FSM	ENSG00000051523.11	ENST00000261623.8	692	6	0	0	0	0	multi-exon	FALSE	canonical	3	2382	junction_1	134.6054976589	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	-6	True	NA	-4	True	AATAAA	-17	NA	88651053	88643288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
transcript_54915.known	chr16	-	217	2	FSM	ENSG00000167508.12	ENST00000562741.1	217	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACAGGTTTTTGTGTGA	9030	False	NA	-16	True	AATAAA	-17	NA	88663161	88662101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88662168_88663010
transcript_54916.known	chr16	-	1799	10	FSM	ENSG00000167508.12	ENST00000301012.8	1799	10	0	0	0	0	multi-exon	TRUE	canonical	3	465	junction_4	48.883080463035	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	18	True	NA	-10	True	AATAAA	-15	NA	88663091	88651939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_54919.known	chr16	+	2446	4	FSM	ENSG00000260630.8	ENST00000669434.1	2446	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCAGCTGTCCCCCAT	-13	True	NA	11	True	AGTAAA	-11	NA	88663334	88675484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88673603
transcript_54920.known	chr16	+	1090	4	FSM	ENSG00000260630.8	ENST00000563261.7	1094	4	0	4	0	-4	multi-exon	TRUE	canonical	0	0	junction_3	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCAGTGTCTGGGTCT	NA	False	NA	110	True	CATAAA	-15	NA	88663297	88687278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88686790
transcript_54922.known	chr16	+	588	3	FSM	ENSG00000260630.8	ENST00000569786.6	1136	3	46	502	0	-502	multi-exon	FALSE	canonical	3	5	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGATTGTTTTCTGGT	21	True	NA	NA	False	NA	NA	NA	88663368	88672179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88663401_88671276_88671466_88671812
transcript_54924.nnic	chr16	-	1719	3	NNC	ENSG00000185669.6	novel	1740	3	NA	NA	554	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	27.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	544	False	NA	-11	True	AATAAA	-14	NA	88685953	88677687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_88678630_88681093_88681715_88685797
transcript_54925.known	chr16	-	1740	3	FSM	ENSG00000185669.6	ENST00000332281.6	1740	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	5.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	-10	True	NA	-11	True	AATAAA	-14	NA	88686507	88677687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88678630_88681093_88681715_88686330
transcript_54928.known	chr16	+	1905	15	FSM	ENSG00000174177.13	ENST00000567949.5	1905	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	48.9750040368366	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	23	True	NA	6	True	AATAAA	-24	NA	88706521	88715386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712060_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_54929.known	chr16	+	1721	15	FSM	ENSG00000174177.13	ENST00000453996.7	1721	15	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	23.6987901180888	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGGGGACGGCAGCGC	4	True	NA	16	True	AATAAA	-34	NA	88706502	88715396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_5493.nic	chr1	-	1895	11	ISM	ENSG00000058804.12	ENST00000371429.4	4552	18	-288	34865	-121	18627	5prime_fragment	FALSE	canonical	3	477	junction_1	37.9327035682931	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGATGACTGTA	NA	False	NA	NA	False	NA	NA	NA	53838584	53800342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_54932.known	chr16	+	1672	14	FSM	ENSG00000174177.13	ENST00000312060.9	1672	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	47.9817519554055	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	-16	True	NA	6	True	AATAAA	-24	NA	88706482	88715386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715181
transcript_54934.known	chr16	+	1586	14	FSM	ENSG00000174177.13	ENST00000564105.5	1586	14	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_2	50.0194045186702	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGGGGGACTGGCCTCT	-16	True	NA	-60	True	NA	NA	NA	88706482	88715320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88706599_88707135_88707211_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_54938.known	chr16	-	2884	7	FSM	ENSG00000103335.22	ENST00000484567.6	2884	7	0	0	0	0	multi-exon	TRUE	canonical	3	155	junction_4	17.2086864370552	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGAGGCCAGTCCCCC	6927	False	NA	-7	True	ATTAAA	-25	NA	88718741	88715345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88715855_88715932_88716120_88716197_88716278_88716360_88716484_88716558_88716732_88716805_88716899_88717022
transcript_54940.known	chr16	+	2664	10	FSM	ENSG00000167513.9	ENST00000301019.9	2664	10	0	0	0	0	multi-exon	TRUE	canonical	3	424	junction_1	50.3265877255628	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGCAGAAGAGCCCTCG	-13	True	NA	18	True	AATAAA	-20	NA	88803788	88809258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88804060_88804544_88804668_88804761_88804899_88805439_88805638_88805723_88805870_88806020_88806122_88806485_88806675_88807050_88807204_88807280_88807483_88808114
transcript_54950.known	chr16	-	542	4	FSM	ENSG00000198931.11	ENST00000568319.5	542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1912.83077023441	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-10	True	NA	-5	True	AGTAAA	-15	NA	88811937	88809468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809707_88810069_88810149_88811549_88811657_88811819
transcript_54951.known	chr16	-	664	5	FSM	ENSG00000198931.11	ENST00000426324.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2079.327941307	3889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	2	True	NA	-5	True	AGTAAA	-15	NA	88811925	88809468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809707_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_54952.known	chr16	-	667	4	FSM	ENSG00000198931.11	ENST00000567391.5	667	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2038.97343451715	2927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-1	True	NA	-5	True	AGTAAA	-15	NA	88811928	88809468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809841_88810069_88810149_88811549_88811657_88811819
transcript_54953.known	chr16	-	788	5	FSM	ENSG00000198931.11	ENST00000569616.1	788	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2416.31708391097	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAATTACACACAGCG	2460	False	NA	-54	True	GGGGCT	-44	NA	88811897	88809517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809908_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_54954.known	chr16	-	437	2	FSM	ENSG00000198931.11	ENST00000567057.5	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	1711	junction_1	0	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	4089	False	NA	-5	True	AGTAAA	-15	NA	88810268	88809468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809707_88810069
transcript_54956.known	chr16	+	1060	6	FSM	ENSG00000167515.10	ENST00000564365.5	1060	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	445.637700380028	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCCTCCTCTTTCTGGA	NA	False	NA	NA	False	NA	NA	NA	88856219	88861415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88856247_88858618_88858790_88859344_88859444_88859572_88859751_88859892_88859973_88860910
transcript_54965.known	chr16	+	854	5	FSM	ENSG00000167515.10	ENST00000567895.5	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	485.410650892623	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCCAGAACCAGCCTA	NA	False	NA	NA	False	NA	NA	NA	88857085	88861351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858641_88858792_88859662_88859751_88859892_88859973_88860913
transcript_54970.known	chr16	+	2215	5	FSM	ENSG00000167515.10	ENST00000301021.7	2215	5	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_4	334.243455433311	4961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGTTTTCTGTTAGG	NA	False	NA	22	True	AATAAA	-29	NA	88857085	88862686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860910
transcript_54971.known	chr16	+	499	4	FSM	ENSG00000167515.10	ENST00000567312.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	455.321376124113	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	2	True	NA	28	True	ACTAAA	-16	NA	88857134	88861112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858618_88858790_88859892_88859973_88860913
transcript_54972.known	chr16	+	915	5	FSM	ENSG00000167515.10	ENST00000564404.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	534.512102295168	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGGCTTTTTCCTTC	11	True	NA	26	True	ACTAAA	-14	NA	88857143	88861110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860892
transcript_54973.known	chr16	+	980	2	FSM	ENSG00000167515.10	ENST00000564547.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	1029	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTACCCAGCACGGCCAC	NA	False	NA	NA	False	NA	NA	NA	88857097	88859512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858618
transcript_54974.known	chr16	+	4095	11	FSM	ENSG00000176715.17	ENST00000614302.5	4095	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	23.3957261054236	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTCTGGTGCTGAC	3	True	NA	NA	False	ATTAAA	-18	NA	89093851	89156233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89093997_89098590_89098764_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_54976.known	chr16	+	2247	10	FSM	ENSG00000176715.17	ENST00000406948.7	2247	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.8506570848124	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCCCACGCCGTCTG	-19	True	NA	9	True	AAAACA	-24	NA	89093882	89154589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89093997_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_54978.known	chr16	+	1541	9	FSM	ENSG00000176715.17	ENST00000378345.8	1541	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	33.990577738544	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCCACGCCGTCT	-4	True	NA	8	True	AAAACA	-23	NA	89093897	89154588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89093993_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_5498.nic	chr1	-	1950	12	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_10	96.9243549295655	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	872	False	NA	-18	True	AATAAA	-27	NA	53889861	53851718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_54983.nic	chr16	+	1507	2	ISM	ENSG00000176715.17	ENST00000614302.5	4095	11	41	56240	-5	-774	5prime_fragment	FALSE	canonical	3	68	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGTGTGGTATCACAT	-9	True	NA	NA	False	AATACA	-35	NA	89093892	89099993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89093997_89098590
transcript_54984.nic	chr16	+	1008	3	ISM	ENSG00000129910.8	ENST00000289746.3	2866	14	21641	0	21622	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGGGCGCCCACTGCCAC	3030	False	NA	NA	False	AATGAA	-25	NA	89193388	89195492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89193607_89193754_89193914_89194861
transcript_54985.known	chr16	-	2443	1	FSM	ENSG00000259877.2	ENST00000570267.2	2443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTATAGGAGTTC	-2	True	NA	1	True	ATTAAA	-16	NA	89217653	89215210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89215200_89217700
transcript_54986.known	chr16	-	1584	10	NNC	ENSG00000167522.17	novel	9301	13	NA	NA	1	-9	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	59.4918813840786	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGCGAAAGAAAGAAACAA	1187	False	NA	NA	False	AATAAA	-9	NA	89490318	89285174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_89285563_89285563_89285650_89286038_89286187_89288527_89288671_89290624_89290829_89291012_89291184_89305205_89305345_89316932_89317079_89418283_89418369_89490244
transcript_54992.nnic	chr16	-	726	5	NNC	ENSG00000261118.1	novel	405	3	NA	NA	-3868	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCCTCTCATCTAGAATA	525	False	NA	NA	False	AATAAA	-17	NA	89508328	89492402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_89492634_89493719_89493909_89504206_89504312_89505044_89505154_89508236
transcript_55.known	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41640	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00130_+_0_1100
transcript_55005.known	chr16	+	2187	6	FSM	ENSG00000167526.14	ENST00000311528.10	2187	6	0	0	0	0	multi-exon	FALSE	canonical	3	8794	junction_1	3343.70971228066	1900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCCTGTAATCCCAGC	9	True	NA	30	True	AATACA	-20	NA	89560681	89564542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_55017.known	chr16	+	924	5	FSM	ENSG00000167526.14	ENST00000484610.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	8794	junction_1	3466.06527636166	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCAGTCATGCTGGGTCT	6	True	NA	3	True	AATAAA	-25	NA	89560678	89563067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561752_89562334_89562392_89562883
transcript_5502.known	chr1	-	1602	11	FSM	ENSG00000058799.15	ENST00000464950.6	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	74.148769376167	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	1000	False	NA	-18	True	AATAAA	-27	NA	53889733	53851718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_55020.known	chr16	+	554	5	FSM	ENSG00000167526.14	ENST00000563270.5	554	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7492.43286172789	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATAAAGCCCTCCTG	8	True	NA	-32	True	AAAAAG	-34	NA	89560680	89563032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_55024.known	chr16	+	958	5	FSM	ENSG00000167526.14	ENST00000562879.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7024.13504906476	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCAGAGGTGAGGGATC	9	True	NA	47	True	AAGAAA	-43	NA	89560681	89563473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89560939_89561064_89561595_89561752_89562334_89562392_89562883
transcript_55027.nic	chr16	+	1652	11	FSM	ENSG00000015413.10	ENST00000690203.1	1631	11	-24	3	-24	0	multi-exon	FALSE	canonical	2	4	junction_5	4.66476151587624	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	-5	True	NA	3	True	AATAAA	-15	NA	89613617	89638430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_55028.nnic	chr16	+	2369	11	NNC	ENSG00000015413.10	novel	1631	11	NA	NA	-84	3080	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_10	5.76541412215983	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATGATTAGTAACATATA	197	False	NA	12	True	AATAAA	-16	NA	89613464	89641536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89640593
transcript_55032.known	chr16	+	1734	11	FSM	ENSG00000015413.10	ENST00000393092.7	1734	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.00333240792145	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCCTGGGGTACGTGTC	-4	True	NA	2	True	AATAAA	-14	NA	89620591	89638429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89620777_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_55034.known	chr16	-	2330	7	FSM	ENSG00000131165.16	ENST00000535997.7	2330	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	189.290781603331	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTGTTGTAAATAAACA	-20	True	NA	-43	True	NA	NA	NA	89657713	89644470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646734_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_55035.known	chr16	-	2412	7	FSM	ENSG00000131165.16	ENST00000674799.1	2412	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	190.701701326676	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTAGAATGCTGTTGTA	-32	True	NA	-51	True	NA	NA	NA	89657725	89644478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89654021_89657581
transcript_55036.known	chr16	-	2300	7	FSM	ENSG00000131165.16	ENST00000675536.1	2300	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	194.505712569637	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTCCTAGAATGCTGT	34	True	NA	-55	True	NA	NA	NA	89657659	89644482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649553_89651568_89651647_89653903_89653924_89657581
transcript_55039.known	chr16	-	2550	6	FSM	ENSG00000131165.16	ENST00000675909.1	2550	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	181.326887140325	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAGTACATGGTCTC	NA	False	NA	NA	False	TTTAAA	-13	NA	89657738	89644236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89657581
transcript_55042.known	chr16	-	494	2	FSM	ENSG00000131165.16	ENST00000675760.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	NA	False	NA	-7	True	AATAAA	-19	NA	89645504	89644434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89644695_89645270
transcript_55043.known	chr16	-	2797	6	FSM	ENSG00000131165.16	ENST00000551981.6	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	38.2591165606317	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	18	True	NA	-7	True	AATAAA	-19	NA	89657675	89644434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_55044.known	chr16	-	803	7	FSM	ENSG00000131165.16	ENST00000550102.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	196.524807594359	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGGTCTGTGTCCTGG	-2	True	NA	NA	False	NA	NA	NA	89657650	89645888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649377_89649498_89651568_89651647_89653903_89653924_89657581
transcript_55048.nic	chr16	+	1190	3	NIC	ENSG00000167523.15	novel	1264	2	NA	NA	24	0	intron_retention	FALSE	canonical	3	12	junction_2	11.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	NA	False	NA	-4	True	NA	NA	NA	89657763	89661483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89657836_89658247_89658422_89660539
transcript_55049.known	chr16	+	2190	3	FSM	ENSG00000167523.15	ENST00000301031.8	2190	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	33	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAAAGC	-15	True	NA	NA	False	NA	NA	NA	89657801	89671267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89657836_89658247_89658422_89669285
transcript_55051.nic	chr16	+	1263	3	NIC	ENSG00000167523.15	novel	1264	2	NA	NA	2	0	intron_retention	FALSE	canonical	3	12	junction_2	34.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	-13	True	NA	-4	True	NA	NA	NA	89657803	89661483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89657949_89658247_89658422_89660539
transcript_55053.known	chr16	+	1297	3	FSM	ENSG00000167523.15	ENST00000457689.3	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	10	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCCACCCTGTGAG	21	True	NA	NA	False	NA	NA	NA	89657837	89670297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89657949_89658247_89658422_89669285
transcript_55056.known	chr16	+	2368	2	FSM	ENSG00000167523.15	ENST00000565890.1	2368	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCTGAAA	12	True	NA	NA	False	NA	NA	NA	89657828	89671272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89658210_89669285
transcript_55059.known	chr16	+	1546	2	FSM	ENSG00000167523.15	ENST00000611218.1	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGGCTCTGCAGAG	-5	True	NA	9	True	AATAAA	-19	NA	89658046	89670456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89658422_89669285
transcript_5506.known	chr1	-	1821	11	FSM	ENSG00000058799.15	ENST00000072644.7	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	94.6678403683109	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-8	True	NA	-32	True	AATAAA	-13	NA	53889797	53851732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_55060.known	chr16	+	3339	2	FSM	ENSG00000167523.15	ENST00000564238.2	3339	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTCTGGTATGTCTT	14	False	NA	21	True	ATTAAA	-21	NA	89657870	89661508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89657949_89658247
transcript_55070.nic	chr16	+	1758	13	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	132	junction_1	89.3144802867312	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	NA	False	NA	27	True	GATAAA	-16	NA	89686659	89696354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_55071.known	chr16	+	1424	13	FSM	ENSG00000185324.22	ENST00000505473.5	1424	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_12	124.218529437261	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAGGACAAGAGGGACA	-16	True	NA	NA	False	NA	NA	NA	89686669	89696164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686760_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_55090.known	chr16	+	1376	12	FSM	ENSG00000185324.22	ENST00000510811.6	1376	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	115.485536284459	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGGTGGACGCTGGC	5	True	NA	NA	False	NA	NA	NA	89686690	89696038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686798_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_55120.known	chr16	+	2532	11	FSM	ENSG00000185324.22	ENST00000472018.5	2532	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	78.4841385249274	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	14	True	NA	27	True	GATAAA	-16	NA	89686699	89696354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_55121.known	chr16	+	1767	13	FSM	ENSG00000185324.22	ENST00000353379.12	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	77.4078304968058	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	3	True	NA	27	True	GATAAA	-16	NA	89686688	89696354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_55122.known	chr16	+	1703	12	FSM	ENSG00000185324.22	ENST00000505733.5	1703	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	120.88598548882	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	4	True	NA	27	True	GATAAA	-16	NA	89686689	89696354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_55123.known	chr16	-	4601	43	FSM	ENSG00000187741.15	ENST00000568369.5	4601	43	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	47.3160898455974	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGGCTACTTGAGCC	-3	True	NA	-5	True	AATAAA	-17	NA	89816646	89738402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89738709_89738881_89738975_89739128_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_55128.nic	chr16	-	2180	13	NIC	ENSG00000187741.15	novel	5452	43	NA	NA	-22	8	intron_retention	FALSE	canonical	3	131	junction_3	35.7032522639356	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACACACACA	-36	True	NA	NA	False	NA	NA	NA	89816679	89791035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_5513.nic	chr1	-	1655	10	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	138	junction_1	60.0791658800246	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	882	False	NA	-32	True	AATAAA	-13	NA	53889851	53851732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_55131.known	chr16	-	1088	11	FSM	ENSG00000187741.15	ENST00000534992.5	1088	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	64.8448147502944	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCTGCACCAATGTT	-12	True	NA	NA	False	NA	NA	NA	89816655	89798918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89799080_89799171_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_55133.known	chr16	-	1694	10	FSM	ENSG00000187741.15	ENST00000563673.5	1694	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	20.5882622678524	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATAAAGCACTGTGT	8	True	NA	-34	True	ATTAAA	-32	NA	89816635	89798384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_55134.known	chr16	-	2660	15	FSM	ENSG00000075399.14	ENST00000389386.8	2660	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	12.9104055485709	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCCGTGTGGCTCCCTC	8	True	NA	-6	True	AATAAA	-16	NA	89720898	89707133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89707955_89708426_89708532_89708856_89708957_89709226_89709436_89709776_89709907_89710585_89711011_89711326_89711413_89711881_89711970_89712046_89712100_89712459_89712523_89712604_89712717_89716461_89716625_89716729_89716823_89719026_89719103_89720762
transcript_55135.nnic	chr16	-	1126	8	NNC	ENSG00000187741.15	novel	571	6	NA	NA	-22	-4638	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	78.0928280696657	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAATCTGACTA	-36	True	NA	NA	False	NA	NA	NA	89816679	89803628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_89803705_89805002_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_55142.known	chr16	+	1753	4	FSM	ENSG00000261373.1	ENST00000562866.1	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.1937739383873	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTCTCCTTGCCAGTT	5	True	NA	10	True	NA	NA	NA	89711855	89718165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89712223_89712688_89712819_89716470_89716905_89717343
transcript_55143.known	chr16	-	5452	43	FSM	ENSG00000187741.15	ENST00000389301.8	5452	43	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	54.1566605095903	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGATTCTTGTCTTTTT	-4	True	NA	-6	True	AAGAAA	-23	NA	89816647	89737548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89738709_89738881_89738975_89739132_89739290_89739477_89739554_89739993_89740100_89740803_89740867_89742799_89742939_89744958_89745072_89746583_89746689_89746830_89746891_89748658_89748768_89749729_89749903_89752137_89752223_89758576_89758706_89761948_89762023_89764889_89765067_89767140_89767238_89769836_89770025_89770165_89770260_89770563_89770635_89771677_89771815_89773270_89773385_89775741_89775816_89778800_89778851_89778942_89779004_89779868_89779958_89782858_89782919_89783006_89783103_89784853_89784965_89791402_89791537_89791926_89792069_89792470_89792548_89795905_89796019_89799165_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_55145.known	chr16	+	2172	13	FSM	ENSG00000204991.11	ENST00000393062.6	2172	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_12	9.3760184631976	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATATATTTATATACAC	16	False	NA	12	True	AATATA	-9	NA	89828498	89870391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89828795_89845321_89845366_89850303_89850661_89854285_89854367_89854486_89854652_89855599_89855687_89856112_89856237_89858337_89858508_89859164_89859355_89860682_89860796_89863475_89863611_89863793_89863862_89870049
transcript_55147.known	chr16	+	2377	19	FSM	ENSG00000141002.20	ENST00000263347.11	2377	19	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_17	98.3242305893499	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTCCGCACCTTCTCCT	-2	True	NA	37	True	TATAAA	-19	NA	89873585	89911384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909084_89910590_89910664_89911079
transcript_55153.known	chr16	+	2248	18	FSM	ENSG00000141002.20	ENST00000263346.13	2248	18	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_7	36.9005959198324	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	4	True	NA	32	True	TATAAA	-14	NA	89873591	89911379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_55165.known	chr16	+	1706	4	FSM	ENSG00000258947.8	ENST00000315491.12	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_1	35.5902608401044	1196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGCCAGAGATGTCC	-1	True	NA	35	True	AATAAA	-23	NA	89923341	89936097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934728
transcript_55166.nic	chr16	+	503	3	ISM	ENSG00000141002.20	ENST00000614813.4	2047	6	-90	6020	-19	0	5prime_fragment	FALSE	canonical	3	359	junction_1	17	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAACAAGA	NA	False	NA	NA	False	NA	NA	NA	89873550	89884613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89873860_89883350_89883513_89884581
transcript_55168.known	chr16	+	2111	1	FSM	ENSG00000258839.4	ENST00000555147.2	2111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGCCCCTTCCAGAAAG	-5	True	NA	6	True	AATAAA	-20	NA	89918861	89920972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89918900_89921000
transcript_55169.known	chr16	+	477	3	FSM	ENSG00000141002.20	ENST00000565404.1	477	3	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_2	9.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGAGTTTATTGGCTG	7545	False	NA	NA	False	AATAAA	-23	NA	89883393	89886130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89883513_89884581_89884657_89885847
transcript_55170.known	chr16	+	515	3	FSM	ENSG00000141002.20	ENST00000566283.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	160.5	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	1695	False	NA	32	True	TATAAA	-14	NA	89908965	89911379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89909108_89910590_89910664_89911079
transcript_55175.known	chr16	+	3620	13	FSM	ENSG00000140995.17	ENST00000563594.6	3620	13	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_10	163.028861623402	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	-11	True	NA	5	True	ATTAAA	-14	NA	89948754	89968060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_55179.nic	chr16	+	919	6	NIC	ENSG00000140995.17	novel	852	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	190.884886777345	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	NA	False	NA	NA	False	ATTAAA	-14	NA	89948724	89959366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89948815_89949419_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_55181.known	chr16	+	612	6	FSM	ENSG00000140995.17	ENST00000561784.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	205.896478843131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGAGCACCGCTTTTACA	-11	True	NA	NA	False	NA	NA	NA	89948754	89959048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957472_89957661_89959013
transcript_55182.known	chr16	+	852	6	FSM	ENSG00000140995.17	ENST00000418391.6	852	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	175.302025088132	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	29	True	NA	NA	False	ATTAAA	-14	NA	89948794	89959366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_55183.known	chr16	+	549	6	FSM	ENSG00000140995.17	ENST00000566820.5	549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.022498783185	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCACCGCTTTTACAAG	-11	True	NA	NA	False	NA	NA	NA	89948754	89959050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957537_89957661_89959013
transcript_55186.known	chr16	+	580	6	FSM	ENSG00000140995.17	ENST00000561741.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	248.073859969163	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACAAGTGTAACACCAT	9	True	NA	NA	False	NA	NA	NA	89948774	89959097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89949564_89949639_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_55188.known	chr16	+	816	5	FSM	ENSG00000140995.17	ENST00000610455.4	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	133.507256357098	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	NA	False	NA	NA	False	ATTAAA	-11	NA	89948730	89959363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_5519.known	chr1	-	1503	9	FSM	ENSG00000058799.15	ENST00000371399.5	1503	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	110.872392866755	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	10	True	NA	-32	True	AATAAA	-13	NA	53889779	53851732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53889712
transcript_55191.known	chr16	+	535	2	FSM	ENSG00000140995.17	ENST00000562044.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGTCTAGTTTGTAC	12	True	NA	NA	False	ATTAAA	-13	NA	89958350	89959365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89958534_89959013
transcript_55192.known	chr16	-	2744	1	FSM	ENSG00000177946.7	ENST00000646748.1	2744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTAAAAGCTCATATA	273	False	NA	-25	True	ATTAAA	-17	NA	89972534	89969790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89969800_89972500
transcript_5520.nic	chr1	-	1491	9	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_7	107.943272138656	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	882	False	NA	-32	True	AATAAA	-13	NA	53889851	53851732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53888906_53888987_53889712
transcript_55205.known	chr16	+	1687	11	FSM	ENSG00000141013.17	ENST00000536122.7	1687	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	21.910956163527	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCATCCTCTTTCCTGG	11	True	NA	10	True	AATGAA	-16	NA	90019642	90043472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_90019769_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_55206.known	chr16	+	3094	11	FSM	ENSG00000141013.17	ENST00000268699.9	3094	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	25.8302148655407	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	7	True	NA	14	True	TATAAA	-16	NA	90022679	90044960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_90022725_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_55210.known	chr16	-	1349	5	FSM	ENSG00000222019.7	ENST00000409873.5	1349	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.12132034355964	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTACTTATTAATTGT	NA	False	NA	NA	False	AGTAAA	-23	NA	90047625	90039760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90040418_90043647_90043990_90044501_90044624_90046956_90047097_90047537
transcript_55211.known	chr16	-	2056	4	FSM	ENSG00000003249.15	ENST00000002501.11	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_3	25.6645020732269	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	0	True	NA	-7	True	ATTAAA	-20	NA	90019456	90004870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019310
transcript_55212.known	chr16	-	2073	4	FSM	ENSG00000003249.15	ENST00000568838.2	2073	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	311.14412523245	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-26	True	NA	-7	True	ATTAAA	-20	NA	90019890	90004870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019727
transcript_55213.known	chr16	-	398	4	FSM	ENSG00000222019.7	ENST00000610227.1	398	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAAGACTGGCAGCGGGA	NA	False	NA	NA	False	NA	NA	NA	90047597	90043913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90043990_90044501_90044624_90046956_90047097_90047537
transcript_55214.known	chr16	-	1381	4	FSM	ENSG00000222019.7	ENST00000517889.5	1381	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.82842712474619	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTTCCCACTCAGGTT	NA	False	NA	NA	False	NA	NA	NA	90047773	90042901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90043990_90044501_90044624_90046956_90047097_90047742
transcript_55216.known	chr16	+	1906	4	FSM	ENSG00000260528.6	ENST00000663989.1	1906	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	7.36357401145817	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTTGTGGTCTGTGCTT	4261	False	NA	NA	False	AATAAA	-13	NA	90106528	90120883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_90106706_90111371_90111486_90116287_90116484_90119464
transcript_55221.known	chr17	-	2578	9	FSM	ENSG00000181031.16	ENST00000618002.4	2578	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	15.8094117537624	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCAGTGAAAGGAGGGGC	NA	False	NA	81	True	NA	NA	NA	352842	212388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_213924_215653_215803_219622_219737_247110_247286_281767_281855_319419_319550_321271_321416_327466_327580_352711
transcript_55238.known	chr17	-	880	2	FSM	ENSG00000181031.16	ENST00000572965.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCCCAGGACCGTGGG	NA	False	NA	NA	False	NA	NA	NA	215933	213323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_213924_215653
transcript_55239.known	chr17	+	307	2	FSM	ENSG00000262920.5	ENST00000572998.1	307	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAGGTCTAAGGCGTTT	153	False	NA	NA	False	NA	NA	NA	321516	322453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_321632_322261
transcript_55240.known	chr17	+	411	2	FSM	ENSG00000262920.5	ENST00000570501.5	411	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAGGTCTAAGGCGTTT	28	False	NA	NA	False	NA	NA	NA	321391	322453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_321611_322261
transcript_55241.known	chr17	+	1841	2	FSM	ENSG00000187624.9	ENST00000360127.7	1841	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCCATTATAAAAAGCCT	-31	True	NA	NA	False	CATAAA	-17	NA	410324	414666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_410647_413147
transcript_55245.known	chr17	-	3621	2	FSM	ENSG00000183688.4	ENST00000329099.4	3621	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGAGATGCTTCTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	445939	439977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_443495_445835
transcript_55248.known	chr17	-	3070	19	FSM	ENSG00000141252.21	ENST00000571805.6	3070	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	10.9036181558641	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTCCAGCCTGGGCAACAA	-22	True	NA	NA	False	NA	NA	NA	714857	532004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_55249.known	chr17	-	2695	18	FSM	ENSG00000141252.21	ENST00000291074.10	2695	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	12.3856709261411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	-22	True	NA	NA	False	NA	NA	NA	714857	532292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_532912_537027_537177_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
transcript_55258.known	chr17	-	2939	7	FSM	ENSG00000141252.21	ENST00000576019.6	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	12.0657918651588	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCGGATTTGTGTGTG	26	True	NA	NA	False	CATAAA	-19	NA	714809	651059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_55259.nic	chr17	-	1964	6	ISM	ENSG00000141252.21	ENST00000681154.1	2161	16	-28	100386	-10	200	5prime_fragment	FALSE	canonical	3	9	junction_2	17.19302184027	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGTGAACCACAAAAACT	6447	False	NA	NA	False	NA	NA	NA	714867	652005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
transcript_55260.known	chr17	-	3813	5	FSM	ENSG00000141252.21	ENST00000680970.1	3813	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.9823301690668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACGTATGCAAGCATTT	-4	True	NA	NA	False	AATAAA	-27	NA	714839	667409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_670808_697417_697485_699330_699381_710532_710614_714622
transcript_55261.known	chr17	-	1264	5	FSM	ENSG00000141252.21	ENST00000681295.1	1264	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.9823301690668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTAGCTTGTTTTAAGT	-4	True	NA	NA	False	NA	NA	NA	714839	674034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_674884_697417_697485_699330_699381_710532_710614_714622
transcript_55262.nnic	chr17	-	1090	5	NIC	ENSG00000141252.21	novel	3402	6	NA	NA	-10	294	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	21.2529409729571	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCGTCCTCCGTATATT	6447	False	NA	NA	False	ATTAAA	-21	NA	714867	676010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_676658_697417_697485_699330_699381_710532_710614_714622
transcript_55263.nic	chr17	-	942	5	NIC	ENSG00000141252.21	novel	1057	8	NA	NA	-10	622	intron_retention	FALSE	canonical	0	0	junction_1	22.9823301690668	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTTTTATAAGTCTTAT	6447	False	NA	NA	False	NA	NA	NA	714867	696795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_697295_697417_697485_699330_699381_710532_710614_714622
transcript_55264.nic	chr17	-	1062	4	ISM	ENSG00000141252.21	ENST00000681295.1	1264	5	-28	22764	-10	619	5prime_fragment	FALSE	canonical	3	52	junction_2	1.4142135623731	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTATAAGTCT	6447	False	NA	NA	False	NA	NA	NA	714867	696798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_697485_699330_699381_710532_710614_714622
transcript_55266.known	chr17	-	957	3	FSM	ENSG00000141252.21	ENST00000681442.1	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTATATTTTTTGTAGA	6640	False	NA	NA	False	NA	NA	NA	714674	698556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_699381_710532_710614_714622
transcript_55267.known	chr17	-	1369	3	FSM	ENSG00000141252.21	ENST00000571456.2	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTGTGATTGTCTTT	21	True	NA	1	True	AATAAA	-14	NA	714814	704999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_706096_710532_710614_714622
transcript_55268.known	chr17	-	1387	3	FSM	ENSG00000141252.21	ENST00000679865.1	1387	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	26	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTAGTTTCGTGTCTTT	6033	False	NA	NA	False	NA	NA	NA	715281	708140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_708788_710532_710614_714622
transcript_55270.known	chr17	+	2224	5	FSM	ENSG00000167695.15	ENST00000308278.13	2224	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.6631167472837	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCATTTGTGAAAT	7	True	NA	5	True	ATTAAA	-19	NA	732595	742968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_732770_733097_733182_737845_738048_740504_740601_741300
transcript_55273.known	chr17	+	677	2	FSM	ENSG00000167695.15	ENST00000570892.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTAATTGTCTTTTTTT	1133	False	NA	10	True	TTTAAA	-14	NA	741663	742884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_742053_742596
transcript_55274.known	chr17	-	3744	2	FSM	ENSG00000179409.11	ENST00000319004.6	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGAGTTATTTCGTCTT	8	True	NA	-10	True	AAAAAG	-25	NA	752264	744420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_748033_752132
transcript_55276.known	chr17	-	1809	10	FSM	ENSG00000167699.14	ENST00000301328.9	1809	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	386.324305649803	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGAAATCAAGCTGTG	1	True	NA	-20	True	AATAAA	-17	NA	782279	759329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778621_778662_780683_780739_782165
transcript_55286.nnic	chr17	+	979	4	NNC	ENSG00000171861.11	novel	1729	4	NA	NA	-17	1020	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	86.8600406784769	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTTTCTGGTTCTTTAT	5	False	NA	6	True	AATAGA	-15	NA	782335	789218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_782693_783082_783328_787964_788133_789009
transcript_55287.nnic	chr17	+	1541	4	NNC	ENSG00000171861.11	novel	1729	4	NA	NA	-17	1582	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	86.8600406784769	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGGTTTTCACATTG	5	False	NA	NA	False	AATAAA	-15	NA	782335	789780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_782693_783082_783328_787964_788133_789009
transcript_55288.known	chr17	+	1729	4	FSM	ENSG00000171861.11	ENST00000304478.9	1729	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	31.2836485510668	1956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTTTTGTGTCGTT	-9	True	NA	27	True	AATAAA	-23	NA	782352	792509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_782693_783082_783328_787964_788133_791533
transcript_55296.known	chr17	+	572	3	FSM	ENSG00000171861.11	ENST00000571157.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	35	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGGTCACTTGAGCCCA	198	False	NA	NA	False	NA	NA	NA	782599	788198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_782693_783082_783328_787964
transcript_55297.known	chr17	+	727	3	FSM	ENSG00000171861.11	ENST00000574509.1	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	85.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGATGTAGAAAC	5	True	NA	NA	False	NA	NA	NA	782366	791766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_782693_787964_788133_791533
transcript_55299.known	chr17	+	770	2	FSM	ENSG00000171861.11	ENST00000574916.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGTGGGGTTTCACCA	-4	True	NA	NA	False	NA	NA	NA	782357	783517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_782693_783082
transcript_55303.known	chr17	-	2059	9	FSM	ENSG00000167699.14	ENST00000301329.11	1765	9	-61	-233	-47	226	multi-exon	FALSE	canonical	3	771	junction_5	28.6792607994	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGATGCTATTATACCTT	NA	False	NA	NA	False	NA	NA	NA	782341	759096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
transcript_55307.known	chr17	-	3776	5	FSM	ENSG00000159842.16	ENST00000572585.5	3776	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	12.0701077045733	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCAGCCCTGTGGTGT	NA	False	NA	-9	True	AATAAA	-26	NA	1012589	1003526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1006170_1007164_1007313_1009678_1009785_1010728_1010864_1011845
transcript_55308.known	chr17	+	3182	4	FSM	ENSG00000177370.5	ENST00000327158.5	3182	4	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_3	53.0178167118271	1511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCATCCTACCTGTGT	2	True	NA	NA	False	ATTAAA	-17	NA	997128	1003671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_997381_998778_998976_999511_999585_1001011
transcript_55313.known	chr17	-	1818	7	FSM	ENSG00000108953.17	ENST00000571732.5	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	4821.76792150855	4087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCGCCTCCATCCTTT	-22	True	NA	-17	True	AATAAA	-25	NA	1400220	1344539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1369708_1369742_1400046
transcript_55319.known	chr17	-	258	2	FSM	ENSG00000108953.17	ENST00000572108.1	258	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTAGTAGGTCCTCTT	609	False	NA	-7	True	AATAAA	-14	NA	1399589	1398877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1399017_1399470
transcript_5532.known	chr1	+	1861	4	FSM	ENSG00000211452.12	ENST00000361921.8	1861	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGATGGCTTCCGTGTG	-1	True	NA	NA	False	ATTAAA	-14	NA	53894186	53911086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53894548_53904665_53904810_53906094_53906295_53909930
transcript_55320.known	chr17	-	2052	6	FSM	ENSG00000108953.17	ENST00000264335.13	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	9776	junction_2	536.426472128287	7600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTGTAATTATGGATCA	-24	True	NA	-8	True	ATTAAA	-18	NA	1400222	1344274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
transcript_55321.known	chr17	-	312	2	FSM	ENSG00000108953.17	ENST00000498643.1	312	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGTATTTTGGTTGAC	63	False	NA	NA	False	AATAAA	-21	NA	1400135	1399043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1399267_1400046
transcript_55322.known	chr17	-	3850	3	FSM	ENSG00000167193.8	ENST00000300574.3	3850	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	84	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTGAATATTTTTC	-1	True	NA	-2	True	AATAAA	-42	NA	1456232	1420692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1423651_1436619_1437156_1455876
transcript_55323.known	chr17	-	4724	32	FSM	ENSG00000197879.17	ENST00000648446.1	4724	32	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_31	38.5159669310902	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	6	True	NA	0	True	AATAAA	-19	NA	1485760	1464185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1485693
transcript_55324.known	chr17	-	4931	32	FSM	ENSG00000197879.17	ENST00000648651.1	4931	32	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_31	48.8540266602018	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTCCTTATGAATAT	10	True	NA	0	True	AATAAA	-19	NA	1492686	1464185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1465753_1467241_1467342_1467479_1467578_1467839_1467911_1467987_1468124_1468252_1468309_1468402_1468497_1469530_1469615_1470174_1470335_1470434_1470520_1470620_1470690_1471070_1471148_1471222_1471337_1471906_1472025_1472122_1472229_1474609_1474691_1474811_1474859_1474937_1475033_1477504_1477597_1477890_1477972_1478086_1478193_1478409_1478493_1478615_1478736_1479430_1479503_1479591_1479706_1480526_1480626_1480705_1480886_1482477_1482559_1482860_1483060_1483609_1483726_1484147_1484304_1492412
transcript_55326.known	chr17	-	3888	12	FSM	ENSG00000174238.16	ENST00000313486.12	3888	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	162.713559605028	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACCAAACAAGCAAAACAT	-7	True	NA	NA	False	NA	NA	NA	1562792	1517717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562540
transcript_55330.known	chr17	-	3612	12	NNC	ENSG00000174238.16	novel	3888	12	NA	NA	1	-275	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_7	177.387095974261	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTTCTGGAGTCCAGT	-6	True	NA	-12	True	AATAAA	-10	NA	1562791	1517992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1541641_1541650_1548295_1548388_1553003_1553150_1558528_1558560_1562540
transcript_55332.known	chr17	+	542	2	FSM	ENSG00000236618.3	ENST00000425081.3	601	2	54	5	54	-5	multi-exon	FALSE	canonical	3	193	junction_1	0	2971	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAAAGTGTAGTTTGT	7	True	NA	18	True	AATAAA	-18	NA	1516930	1518096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_1517094_1517717
transcript_55333.nnic	chr17	-	814	4	NIC	ENSG00000167705.12	novel	1560	8	NA	NA	-89	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_3	41.5879255981295	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCCTCGCCTGTCTGTC	-17	True	NA	-6	True	AATAAA	-24	NA	1648935	1646149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_1646620_1646905_1646990_1647834_1647958_1648798
transcript_55334.known	chr17	-	7280	43	FSM	ENSG00000174231.17	ENST00000304992.11	7280	43	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_28	197.26541078012	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGGGCTGGTTTGTTT	-21	True	NA	-8	True	AATAAA	-30	NA	1684867	1650628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
transcript_55336.known	chr17	-	865	3	FSM	ENSG00000174231.17	ENST00000571346.1	865	3	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_2	40	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCGTCTCAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	1684852	1683020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1683702_1684471_1684583_1684779
transcript_55337.known	chr17	+	426	1	FSM	ENSG00000277597.1	ENST00000615078.1	426	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTGTTGTCATCAATG	257	False	NA	3	True	AATAAA	-24	NA	1684725	1685151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_1684700_1685200
transcript_55338.known	chr17	-	7445	42	FSM	ENSG00000174231.17	ENST00000572621.5	7445	42	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_28	198.336256575088	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCAGGGGCTGGTTTGT	9	True	NA	-10	True	AATAAA	-28	NA	1684837	1650630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471
transcript_55339.known	chr17	-	1383	4	FSM	ENSG00000186594.15	ENST00000334146.8	1488	4	59	46	0	9	multi-exon	FALSE	canonical	1	1	junction_1	3.55902608401044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTGGAGAGGTGGG	1	True	NA	NA	False	AATATA	-25	NA	1716210	1711492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712400_1713702_1714015_1714370_1714454_1716129
transcript_55340.known	chr17	-	450	4	FSM	ENSG00000186594.15	ENST00000610106.6	1722	4	12	1260	0	-406	multi-exon	FALSE	canonical	0	0	junction_1	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCAGGATGCGTGTGGGA	3	True	NA	NA	False	NA	NA	NA	1716208	1712766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712896_1713855_1714015_1714370_1714454_1716129
transcript_55341.known	chr17	-	754	4	FSM	ENSG00000186594.15	ENST00000576749.6	1266	4	45	467	-1	-200	multi-exon	FALSE	canonical	1	1	junction_1	3.55902608401044	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATACTTAAGGATTTA	-1	True	NA	NA	False	NA	NA	NA	1716212	1711970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712400_1713855_1714015_1714370_1714454_1716129
transcript_55342.known	chr17	-	555	4	FSM	ENSG00000186594.15	ENST00000608198.6	1911	4	38	1318	-1	-464	multi-exon	FALSE	canonical	2	2	junction_1	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGATGTGGAGAAGA	2	True	NA	NA	False	NA	NA	NA	1716209	1712824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712905_1713702_1714015_1714370_1714454_1716129
transcript_55346.known	chr17	-	557	4	FSM	ENSG00000186594.15	ENST00000574016.6	2092	4	64	1471	0	-614	multi-exon	FALSE	canonical	0	0	junction_1	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCCTTCCAGATATCA	1	True	NA	NA	False	NA	NA	NA	1716210	1712974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1713056_1713702_1714015_1714370_1714454_1716129
transcript_55347.known	chr17	-	525	3	FSM	ENSG00000186594.15	ENST00000690262.1	1326	3	36	765	0	92	multi-exon	FALSE	canonical	1	1	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGGAAATTCATAAAAG	0	True	NA	NA	False	NA	NA	NA	1716211	1712268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712400_1713702_1714015_1716129
transcript_5535.known	chr1	-	894	6	FSM	ENSG00000081870.12	ENST00000371378.6	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	328.958356027021	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTTTGCCAAGTTT	1	True	NA	-20	True	AATAAA	-15	NA	53945572	53916573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53917117_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_55350.known	chr17	-	584	3	FSM	ENSG00000186594.15	ENST00000609442.6	1855	3	59	1212	0	-353	multi-exon	FALSE	canonical	2	2	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAACAAAGGTGACTCTG	1	True	NA	NA	False	NA	NA	NA	1716210	1712713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712905_1713702_1714015_1716129
transcript_55352.known	chr17	-	570	3	FSM	ENSG00000186594.15	ENST00000608913.6	1965	3	23	1372	0	-518	multi-exon	FALSE	canonical	0	0	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTGGGAGGAGATGTG	1	True	NA	NA	False	NA	NA	NA	1716210	1712878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1713056_1713702_1714015_1716129
transcript_55353.known	chr17	-	2626	2	FSM	ENSG00000186594.15	ENST00000574306.2	2633	2	0	7	0	-4	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCAGTGTTATTATTTA	-1	True	NA	NA	False	AATATA	-7	NA	1716251	1711510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1714015_1716129
transcript_55357.known	chr17	+	1438	8	FSM	ENSG00000132386.11	ENST00000254722.9	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	21.2468485058037	919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	0	True	NA	29	True	AATAAA	-17	NA	1762059	1777565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_1762114_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_55367.known	chr17	-	4405	11	FSM	ENSG00000186532.12	ENST00000305513.12	4405	11	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	16.6916146612603	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGAGATGGAGTTTCA	-35	True	NA	38	True	NA	NA	NA	1829902	1779484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1781440_1783034_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
transcript_55377.known	chr17	+	1636	2	FSM	ENSG00000108963.19	ENST00000575162.2	1636	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	28	False	NA	14	True	AATAAA	-25	NA	2041533	2043898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2041876_2042604
transcript_55378.known	chr17	+	1031	2	FSM	ENSG00000262664.3	ENST00000572195.3	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	0	536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	-7	True	NA	10	True	AATAAA	-14	NA	2042021	2043425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2042232_2042604
transcript_55379.nnic	chr17	-	906	3	NNC	ENSG00000070366.14	novel	5974	19	NA	NA	-50	-113368	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	8	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGGATGGGAAAAGG	14	False	NA	NA	False	GGGGCT	-16	NA	2303835	2300104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_2300665_2303013_2303157_2303632
transcript_55380.nnic	chr17	-	1093	2	NNC	ENSG00000070366.14	novel	5974	19	NA	NA	239	-113368	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGGATGGGAAAAGG	-17	True	NA	NA	False	GGGGCT	-16	NA	2303546	2300104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_2300665_2303013
transcript_55381.nic	chr17	-	772	2	ISM	ENSG00000070366.14	ENST00000263073.11	5974	19	-59	240262	-59	-113368	5prime_fragment	FALSE	canonical	3	55	junction_1	0	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGGATGGGAAAAGG	5	True	NA	NA	False	GGGGCT	-16	NA	2303844	2300104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_2300665_2303632
transcript_55382.known	chr17	-	475	1	FSM	ENSG00000262402.1	ENST00000573670.1	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATAAAGTGTCTATTTA	NA	False	NA	NA	False	NA	NA	NA	2127904	2127429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_2127400_2127900
transcript_55387.known	chr17	+	2482	8	FSM	ENSG00000167720.13	ENST00000344595.10	2482	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	16.9428812334206	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGACCTGCAGGGTCTG	-14	True	NA	11	True	AATAAA	-24	NA	2303949	2325260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2304018_2315556_2315729_2317869_2317997_2318825_2318930_2321305_2321426_2321541_2321617_2323135_2323346_2323654
transcript_5539.known	chr1	-	685	6	FSM	ENSG00000081870.12	ENST00000194214.10	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_5	99.674269498201	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-10	True	NA	-8	True	ATTAAA	-15	NA	53945699	53921560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_55396.known	chr17	-	4245	15	FSM	ENSG00000167721.11	ENST00000301364.10	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_7	72.4602635650628	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCATTGCCTGGATCA	-8	True	NA	-21	True	AATAAA	-18	NA	2336457	2322395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
transcript_55397.known	chr17	-	573	2	FSM	ENSG00000167721.11	ENST00000576202.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	561	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTGCCCCCGCTTG	6	True	NA	NA	False	AATGAA	-23	NA	2336443	2335564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_2335731_2336036
transcript_55398.known	chr17	-	2813	1	FSM	ENSG00000070444.15	ENST00000575402.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGGAGAGTGGGGGAGG	9004	False	NA	NA	False	AGTAAA	-10	NA	2392078	2389265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_2389300_2392100
transcript_55415.known	chr17	-	5740	10	FSM	ENSG00000127804.13	ENST00000263092.11	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	18.5758372192228	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	1	True	NA	-5	True	AATAAA	-33	NA	2511888	2416048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_5542.nnic	chr1	-	636	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-633	0	at_least_one_novel_splicesite	FALSE	canonical	3	280	junction_5	228.989432070565	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	NA	False	NA	-8	True	ATTAAA	-15	NA	53946332	53921560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
transcript_55420.nnic	chr17	-	1918	7	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.3455043696562	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	NA	False	NA	-5	True	AATAAA	-33	NA	2511914	2416048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_2417174_2464298_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_55421.nnic	chr17	-	896	7	NNC	ENSG00000127804.13	novel	5740	10	NA	NA	-23	-1013	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	59.3455043696562	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGAACCCA	NA	False	NA	NA	False	NA	NA	NA	2511914	2417070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_2417174_2464298_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_55441.known	chr17	+	5589	11	FSM	ENSG00000007168.14	ENST00000397195.10	5589	11	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_4	44.4185771946829	1985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGATTTTTTTTTTTTT	9	True	NA	13	True	ATTAAA	-15	NA	2593653	2685615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_55443.known	chr17	+	5204	10	FSM	ENSG00000007168.14	ENST00000676353.1	5204	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	172.381360167894	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	-3	True	NA	6	True	ATTAAA	-41	NA	2593946	2685608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2594007_2638098_2638321_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_55450.known	chr17	+	3544	4	FSM	ENSG00000007168.14	ENST00000675385.1	3544	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	280.744644749558	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGATGATTATTGAC	3096	False	NA	17	True	AATAAA	-17	NA	2674714	2684499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2675038_2676313_2676607_2680163_2680321_2681728
transcript_55453.known	chr17	+	443	2	FSM	ENSG00000262050.1	ENST00000572876.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTCGGCCGGGCGG	286	False	NA	NA	False	TTTAAA	-29	NA	2712308	2712833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2712400_2712481
transcript_55456.nnic	chr17	-	590	4	NNC	ENSG00000277200.2	novel	4643	4	NA	NA	169	-6386	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	8.52447456836295	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGCCAGGCACGGTGA	174	False	NA	-13	True	AATAAA	-23	NA	2749483	2727186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_2727503_2730445_2730494_2735015_2735169_2749410
transcript_55459.nic	chr17	-	758	4	NIC	ENSG00000261848.5	novel	534	4	NA	NA	22	65	combination_of_known_junctions	TRUE	canonical	2	3	junction_2	1.69967317119759	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTGGTTGTTCTTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	3177009	3134903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_3135191_3160233_3160289_3163692_3163890_3176790
transcript_55464.nnic	chr17	-	764	3	NIC	ENSG00000261848.5	novel	534	4	NA	NA	-39	65	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTGGTTGTTCTTTTGT	NA	False	NA	NA	False	AATAAA	-23	NA	3177070	3134903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_3135191_3163692_3163890_3176790
transcript_55468.known	chr17	+	2657	12	FSM	ENSG00000040531.16	ENST00000673965.1	2657	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19.8461021007915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGCTTGTCAGTCC	-22	True	NA	-72	True	NA	NA	NA	3636458	3661448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636704_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_55469.known	chr17	+	4139	12	FSM	ENSG00000040531.16	ENST00000046640.9	4139	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	9.916177616017	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAAAGAGGAAAATGAC	-1	True	NA	NA	False	ATTAAA	-22	NA	3636759	3663103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_55472.known	chr17	-	1998	12	FSM	ENSG00000083454.22	ENST00000547178.5	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	18.2869686700802	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	313	False	NA	-4	True	AATAAA	-17	NA	3696096	3673226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
transcript_55476.known	chr17	-	2031	11	FSM	ENSG00000083454.22	ENST00000345901.7	2031	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	19.8143887112371	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGTCAATTTCAAACG	20	True	NA	-22	True	CATAAA	-7	NA	3696216	3673244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3691643_3691795_3695868
transcript_55482.known	chr17	+	803	6	FSM	ENSG00000040531.16	ENST00000399306.7	803	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	27.3671335729557	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGCTGAGAGGGGAT	68	False	NA	NA	False	AATAAA	-21	NA	3636828	3650519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3650173
transcript_55489.known	chr17	+	536	4	FSM	ENSG00000040531.16	ENST00000495445.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	5.90668171555645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTCAGATGCGCTATT	23	False	NA	NA	False	NA	NA	NA	3636746	3647604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443
transcript_55495.known	chr17	+	656	2	FSM	ENSG00000127774.7	ENST00000248378.6	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	1261	junction_1	0	3307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	2	True	NA	18	True	ATTAAA	-15	NA	3668811	3669665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3668900_3669097
transcript_55496.known	chr17	+	762	2	FSM	ENSG00000127774.7	ENST00000397133.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGTTCTTTCCTGCTG	12	True	NA	21	True	ATTAAA	-18	NA	3668821	3669668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3669013_3669097
transcript_55497.known	chr17	+	2490	13	FSM	ENSG00000040531.16	ENST00000381870.8	2490	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	25.4300511206722	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGTGCTCGATACAGA	-22	True	NA	22	True	ATTAAA	-23	NA	3636458	3661542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636709_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235_3660351_3660616
transcript_55498.known	chr17	-	1280	4	FSM	ENSG00000213977.8	ENST00000225525.4	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_3	6.0184900284226	2036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	0	True	NA	-6	True	AATAAA	-15	NA	3668578	3662894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3663886_3664194_3664273_3664678_3664799_3668487
transcript_55499.known	chr17	-	1302	3	FSM	ENSG00000213977.8	ENST00000611779.4	1302	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	174.5	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGGCTTTGCTGAGGC	NA	False	NA	-7	True	AATAAA	-14	NA	3668679	3662895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3663886_3664678_3664799_3668487
transcript_55507.known	chr17	-	721	5	FSM	ENSG00000083457.12	ENST00000570360.1	721	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	262.530950556311	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGTGCAAAAAGTAAAC	NA	False	NA	-75	True	NA	NA	NA	3723854	3714691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723287_3723384_3723687
transcript_55508.known	chr17	-	672	4	FSM	ENSG00000083457.12	ENST00000572179.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_3	11.6141675934562	4795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCCTTTAATCTGGAA	-34	True	NA	-11	True	AATAAA	-19	NA	3723837	3714627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723687
transcript_55509.known	chr17	-	731	3	FSM	ENSG00000083457.12	ENST00000572433.5	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_2	1.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCAGTAGTGCCTTTA	3184	False	NA	-19	True	AATAAA	-11	NA	3720619	3714635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3714943_3716687_3716799_3720306
transcript_55517.known	chr17	-	518	2	FSM	ENSG00000074356.17	ENST00000572988.1	518	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCATCAGTTGTTCTAG	NA	False	NA	-9	True	AATAAA	-13	NA	3803382	3802164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3802482_3803181
transcript_55518.known	chr17	-	12772	13	FSM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_6	33.2802702646611	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTTCTAGTGGCATT	-7	True	NA	-2	True	AATAAA	-20	NA	3846246	3802157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_55519.known	chr17	-	2459	16	FSM	ENSG00000004660.15	ENST00000158166.5	2459	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	14.1609792505085	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCCTGTGCTGGAGTTT	28	True	NA	NA	False	AATAAA	-20	NA	3893044	3865156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3866012_3869486_3869616_3869800_3869889_3872553_3872628_3873408_3873463_3876222_3876423_3880345_3880435_3881626_3881649_3882256_3882371_3882527_3882565_3883041_3883176_3883428_3883481_3883883_3883938_3884379_3884428_3885327_3885731_3892938
transcript_55534.known	chr17	-	1881	9	FSM	ENSG00000185722.18	ENST00000570934.5	1881	9	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_6	24.6221445044903	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	4242450	4194460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255
transcript_55538.nnic	chr17	+	1313	4	NNC	ENSG00000167740.10	novel	1969	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.3071540382928	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	-13	True	NA	12	True	ATTAAA	-25	NA	4143192	4157697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_4143346_4149890_4150032_4154673_4154861_4156865
transcript_55539.known	chr17	+	694	4	FSM	ENSG00000167740.10	ENST00000577075.6	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	33.2365260920372	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTCTTCTGTTAATAA	NA	False	NA	NA	False	NA	NA	NA	4143167	4157085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4143314_4149890_4150032_4154673_4154861_4156865
transcript_55540.known	chr17	+	1588	4	FSM	ENSG00000167740.10	ENST00000575251.5	1588	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	38.8930156540563	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCAGGTGTGGTGTG	5	True	NA	35	True	TTTAAA	-29	NA	4143210	4157572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4143764_4149890_4150032_4154673_4154861_4156865
transcript_55542.known	chr17	+	1969	4	FSM	ENSG00000167740.10	ENST00000301391.8	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.6144555520604	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	-9	True	NA	12	True	ATTAAA	-25	NA	4143196	4157697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4144006_4149890_4150032_4154673_4154861_4156865
transcript_55545.nnic	chr17	-	1717	6	NNC	ENSG00000132388.13	novel	4167	6	NA	NA	24554	549	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_5	470.259332709091	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAAGTTGTTGGCTTTT	NA	False	NA	-6	True	AATATA	-16	NA	4307369	4271430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4307242
transcript_55546.known	chr17	-	4167	6	FSM	ENSG00000132388.13	ENST00000396981.7	4167	6	0	0	0	0	multi-exon	FALSE	canonical	3	1134	junction_3	87.1862374460557	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGAGCTATTTTGGTTTT	-19	True	NA	-40	True	AATAAA	-20	NA	4366675	4269258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4366270
transcript_55551.known	chr17	-	4104	27	FSM	ENSG00000132382.15	ENST00000381556.6	4104	27	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_1	151.494863896379	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGTTCTTGTACAACAA	-17	True	NA	-1	True	AATAAA	-43	NA	4555386	4538896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4538976_4539438_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_55552.known	chr17	+	537	2	FSM	ENSG00000262921.1	ENST00000574133.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTTCCTGGATCAGTGT	NA	False	NA	NA	False	NA	NA	NA	4565751	4571760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4565855_4571326
transcript_55553.known	chr17	+	1919	8	FSM	ENSG00000188176.12	ENST00000338859.8	1919	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.63624111659431	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	4	False	NA	9	True	CATAAA	-20	NA	4583998	4608319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4584099_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_55558.known	chr17	-	2697	14	FSM	ENSG00000161905.13	ENST00000293761.8	2697	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	3.19578124274477	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAGAGCATCAAAAAATTT	-1	True	NA	NA	False	AATAAA	-16	NA	4641678	4630918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4631780_4631888_4632057_4632180_4632282_4632860_4632983_4633145_4633316_4633413_4633501_4635758_4635969_4637114_4637259_4638216_4638378_4638580_4638685_4638849_4638973_4639050_4639133_4639429_4639632_4641516
transcript_55562.known	chr17	-	3465	17	FSM	ENSG00000141456.16	ENST00000574876.5	3465	17	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_9	56.5461302278945	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	0	True	NA	-3	True	AATAAA	-20	NA	4704129	4671384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_55566.known	chr17	-	3673	17	FSM	ENSG00000141456.16	ENST00000301396.8	3673	17	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_9	56.5461302278945	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	8283	False	NA	-3	True	AATAAA	-20	NA	4704337	4671384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_55574.known	chr17	+	472	2	FSM	ENSG00000244184.1	ENST00000497885.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCTGCGTGTGGCTT	NA	False	NA	7	True	CATAAA	-17	NA	4704229	4705529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4704371_4705198
transcript_55575.known	chr17	-	402	1	FSM	ENSG00000213939.4	ENST00000466297.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAATCTTTGGCGCG	7403	False	NA	NA	False	AAGAAA	-4	NA	4705217	4704815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4704800_4705200
transcript_55576.known	chr17	-	484	4	FSM	ENSG00000141456.16	ENST00000570823.5	484	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	430.683952181489	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGCTTGTATTTTCTCCT	0	True	NA	NA	False	NA	NA	NA	4704129	4683033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4683080_4690887_4690994_4691377_4691443_4703862
transcript_55578.known	chr17	+	1778	15	FSM	ENSG00000141480.18	ENST00000269260.7	1778	15	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	61.3775535650669	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	-33	True	NA	19	True	AATAAA	-15	NA	4710631	4721497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_55580.known	chr17	+	1779	15	FSM	ENSG00000141480.18	ENST00000412477.7	1779	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	130.232073073966	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTGTGTTTTCTCTG	28	True	NA	18	True	AATAAA	-14	NA	4710692	4721496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716672_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_55588.known	chr17	+	1236	14	FSM	ENSG00000141480.18	ENST00000381488.10	1236	14	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	126.297057549106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGGGTTGGGAGAGG	28	True	NA	NA	False	NA	NA	NA	4710692	4721061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_55592.known	chr17	+	1348	14	FSM	ENSG00000141480.18	ENST00000574954.5	1348	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	79.9128963679653	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACTGTCAATGGGG	-35	True	NA	NA	False	NA	NA	NA	4710629	4721096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_55599.nic	chr17	+	1666	13	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_7	142.052880411955	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	-37	True	NA	19	True	AATAAA	-15	NA	4710627	4721497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_556.known	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_3	1474.61759110625	21346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
transcript_5560.known	chr1	+	1764	9	FSM	ENSG00000116212.15	ENST00000371370.8	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	83.2442753286975	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-7	True	NA	28	True	AATAAA	-19	NA	53946349	53968168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53946550_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_55605.known	chr17	-	2324	6	FSM	ENSG00000161921.17	ENST00000293778.12	2324	6	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_4	5.84465567848098	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGTATGTATTTTCA	-22	True	NA	NA	False	ATTAAA	-29	NA	4739928	4733532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4734480_4734582_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_55606.known	chr17	-	1668	5	FSM	ENSG00000161921.17	ENST00000574412.6	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.85234995535981	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGCTTTTCACACTGG	-16	True	NA	NA	False	TTTAAA	-16	NA	4739922	4734285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_55608.known	chr17	+	706	2	FSM	ENSG00000161920.11	ENST00000674339.1	706	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTCACTGGG	2	True	NA	NA	False	AATAAA	-34	NA	4731427	4733608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4731575_4733049
transcript_5561.nic	chr1	+	1861	9	NIC	ENSG00000116212.15	novel	1764	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	120.54330134852	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-18	True	NA	28	True	AATAAA	-19	NA	53946338	53968168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_53946550_53947861_53947982_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_55610.known	chr17	+	836	3	FSM	ENSG00000161920.11	ENST00000293777.6	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	3.5	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGACTCTCACTGG	2	True	NA	NA	False	AATAAA	-33	NA	4731427	4733607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4731575_4731775_4731907_4733049
transcript_55611.known	chr17	+	802	2	FSM	ENSG00000161920.11	ENST00000573708.1	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTGGTGGTGAGTA	5	True	NA	NA	False	NA	NA	NA	4731430	4732433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4731575_4731775
transcript_55612.known	chr17	-	712	3	FSM	ENSG00000182853.12	ENST00000416307.6	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCGCCTGTTTAT	4093	False	NA	-1	True	ATTAAA	-16	NA	4786398	4785284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4785660_4785956_4786053_4786157
transcript_55613.known	chr17	-	698	3	FSM	ENSG00000182853.12	ENST00000328739.6	698	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCGCCTGTTTAT	1	True	NA	-1	True	ATTAAA	-16	NA	4786364	4785284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4785660_4785936_4786053_4786157
transcript_5562.nnic	chr1	+	1631	9	NNC	ENSG00000116212.15	novel	611	3	NA	NA	264	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	106.830400050735	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	192	False	NA	28	True	AATAAA	-19	NA	53946621	53968168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_53946689_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_55636.known	chr17	+	824	6	FSM	ENSG00000142507.10	ENST00000270586.8	824	6	0	0	0	0	multi-exon	FALSE	canonical	3	6421	junction_3	391.823123360529	44654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTACTTTGGGGTTCT	-12	True	NA	30	True	AATAAA	-16	NA	4796163	4798495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798279
transcript_55637.known	chr17	+	871	6	FSM	ENSG00000142507.10	ENST00000614486.4	871	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	2699.12007884051	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	5541	False	NA	37	True	AATAAA	-23	NA	4796143	4798502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798259
transcript_55638.nnic	chr17	-	382	2	NNC	ENSG00000262165.2	novel	562	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTGTGTGTGTGTGCT	-7	True	NA	0	True	NA	NA	NA	4807011	4801158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_4801456_4806926
transcript_55639.known	chr17	-	386	2	FSM	ENSG00000262165.2	ENST00000635921.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTGTGTGTGTGTGCT	3	True	NA	0	True	NA	NA	NA	4802335	4801158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4801456_4802246
transcript_55641.known	chr17	+	3391	25	FSM	ENSG00000129219.14	ENST00000572940.5	3391	25	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_23	24.2525771826418	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCATGCGTCTTCCTTGG	3	True	NA	8	True	AATAAA	-12	NA	4807168	4823428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819550_4821792_4821908_4822639
transcript_55642.known	chr17	+	3443	25	FSM	ENSG00000129219.14	ENST00000263088.11	3443	25	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_23	15.6097703556316	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCGTCTTCCTTGGAG	-14	True	NA	10	True	AATAAA	-14	NA	4807151	4823430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
transcript_55646.nic	chr17	+	1456	10	ISM	ENSG00000129219.14	ENST00000263088.11	3443	25	-21	12129	-21	1976	5prime_fragment	FALSE	canonical	3	143	junction_1	9.70426913817691	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTGAG	-35	True	NA	5	True	AATAAA	-17	NA	4807130	4811301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801
transcript_5565.known	chr1	+	1727	8	FSM	ENSG00000116212.15	ENST00000319223.8	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	59.8682226363256	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	-4	True	NA	28	True	AATAAA	-19	NA	53946352	53968168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53946550_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_55652.known	chr17	+	1728	11	FSM	ENSG00000108523.16	ENST00000571816.5	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	266.192580662948	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	3370	False	NA	-3	True	NA	NA	NA	4940007	4945191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940231_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_55655.known	chr17	+	1775	10	FSM	ENSG00000108523.16	ENST00000262482.11	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	171.139968706579	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	-3	True	NA	28	True	AATAAA	-21	NA	4940267	4945222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940361_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_55657.nic	chr17	+	1939	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-34	0	intron_retention	TRUE	canonical	3	175	junction_1	194.385895947237	2689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	3336	False	NA	28	True	AATAAA	-21	NA	4939973	4945222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_4940231_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_55682.known	chr17	-	952	7	FSM	ENSG00000108528.14	ENST00000544061.6	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	395.178862457664	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTGCTGCGCCTATA	4	True	NA	NA	False	GGGGCT	-4	NA	4940053	4937723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939815
transcript_55686.known	chr17	+	1757	9	FSM	ENSG00000108523.16	ENST00000575111.5	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_3	44.4297197830461	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	11	False	NA	-3	True	NA	NA	NA	4940380	4945191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_55687.known	chr17	+	1436	10	FSM	ENSG00000108523.16	ENST00000576229.5	1436	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	229.500800181504	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGTCTTCACTTCTTG	90	False	NA	-22	True	GGGGCT	-28	NA	4940486	4945172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940727_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_55688.known	chr17	+	1511	11	FSM	ENSG00000108523.16	ENST00000572430.5	1511	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	281.259470951646	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTGGGTCTTCACTTCT	-12	True	NA	-24	True	GGGGCT	-26	NA	4940119	4945170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940231_4940486_4940643_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_55689.known	chr17	+	535	2	FSM	ENSG00000108523.16	ENST00000571365.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCGCAGAACTCCGCTTC	-3	True	NA	NA	False	NA	NA	NA	4940045	4940836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940231_4940486
transcript_55697.known	chr17	+	1453	12	FSM	ENSG00000108515.18	ENST00000519602.6	1453	12	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_4	34.9240024970395	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	0	True	NA	21	True	AATAAA	-17	NA	4951118	4957129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_55699.known	chr17	+	1521	12	FSM	ENSG00000108515.18	ENST00000323997.10	1521	12	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_1	43.4286724040335	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	538	False	NA	23	True	AATAAA	-19	NA	4951094	4957131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_557.known	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	5737	junction_1	1441.5	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_56098_78841_78964_114680
transcript_55723.known	chr17	-	807	3	FSM	ENSG00000108518.8	ENST00000225655.6	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	28033	junction_2	437	9966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	0	True	NA	-16	True	AATAAA	-18	NA	4948530	4945651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4945998_4946627_4946821_4948262
transcript_55724.known	chr17	-	1173	2	FSM	ENSG00000108518.8	ENST00000574872.1	1173	2	0	0	0	0	multi-exon	FALSE	canonical	3	28907	junction_1	0	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTACTAACAAGGTGC	3015	False	NA	-31	True	AATAAA	-3	NA	4947469	4945666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4945998_4946627
transcript_55726.known	chr17	-	1668	7	FSM	ENSG00000091640.8	ENST00000573366.5	1668	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	344.192492977726	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTCAATAAATACTG	5575	False	NA	-32	True	GGGGCT	-8	NA	4967191	4959255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4966400
transcript_55739.known	chr17	-	431	2	FSM	ENSG00000091640.8	ENST00000570341.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGCCGCGGCGGACGGA	6017	False	NA	NA	False	NA	NA	NA	4966749	4966237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4966320_4966400
transcript_55740.known	chr17	-	579	2	FSM	ENSG00000091640.8	ENST00000571023.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTAGCTGGGCTTGGT	11	True	NA	NA	False	AATAAA	-34	NA	4967808	4965829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4966320_4967719
transcript_55741.known	chr17	-	1005	7	FSM	ENSG00000091640.8	ENST00000206020.8	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	868	junction_1	42.5519290592879	7316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	2	True	NA	-2	True	AATAAA	-16	NA	4967817	4959225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_55742.known	chr17	-	1094	6	FSM	ENSG00000091640.8	ENST00000575142.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_4	32.6042941957037	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	4976	False	NA	-2	True	AATAAA	-16	NA	4967790	4959225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_55745.known	chr17	-	856	2	FSM	ENSG00000108509.21	ENST00000572192.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGGCGCCGCGGGGA	1	True	NA	NA	False	NA	NA	NA	4969081	4968138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4968820_4968906
transcript_55750.known	chr17	+	551	2	FSM	ENSG00000262227.1	ENST00000574260.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGGTTCCTTCTGGCTG	-21	True	NA	NA	False	NA	NA	NA	4987705	4988446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4988226_4988415
transcript_55751.known	chr17	+	7917	23	FSM	ENSG00000129250.12	ENST00000320785.10	7917	23	0	0	0	0	multi-exon	TRUE	canonical	3	282	junction_9	33.6055141087351	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCCACCAGTCTTA	-1	True	NA	11	True	AATAAA	-18	NA	4997949	5028401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4998157_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
transcript_55765.known	chr17	+	462	3	FSM	ENSG00000234327.9	ENST00000571138.5	462	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	208.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCTTTGAACATTCATT	NA	False	NA	12	True	AATAAA	-17	NA	5111467	5114379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5111641_5113385_5113453_5114157
transcript_55770.known	chr17	-	1907	3	FSM	ENSG00000167840.13	ENST00000574735.1	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	67	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	NA	False	NA	-5	True	CATAAA	-19	NA	5112064	5105734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5106534_5108925_5109769_5111799
transcript_55777.known	chr17	+	1646	1	FSM	ENSG00000234327.9	ENST00000623522.1	1646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGTCTATGGTATTTTG	1353	False	NA	2	True	AATAAA	-16	NA	5113358	5115004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5113400_5115000
transcript_55778.known	chr17	-	1610	4	FSM	ENSG00000167840.13	ENST00000575898.5	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	47.1616605117146	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTGTTT	22	True	NA	72	True	NA	NA	NA	5111841	5105540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5106507_5108925_5109053_5109393_5109869_5111799
transcript_55779.known	chr17	-	1553	5	FSM	ENSG00000167840.13	ENST00000573015.5	1553	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	16.9558249578132	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	18	True	NA	-43	True	NA	NA	NA	5111845	5105772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111075_5111220_5111799
transcript_55780.known	chr17	+	452	3	FSM	ENSG00000234327.9	ENST00000665679.2	469	3	16	1	-15	-1	multi-exon	FALSE	canonical	3	112	junction_1	152.5	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	-17	True	NA	15	True	AATAAA	-20	NA	5111941	5114382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5112102_5113385_5113453_5114157
transcript_55781.known	chr17	-	4863	2	FSM	ENSG00000180626.10	ENST00000575779.2	4863	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTTTAGTATG	-16	True	NA	-3	True	AATAAA	-17	NA	5191868	5179534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5184277_5191747
transcript_55782.known	chr17	-	757	2	FSM	ENSG00000180626.10	ENST00000576772.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGTGGCCAAAACTTCAA	-10	True	NA	NA	False	NA	NA	NA	5191862	5183950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5184277_5191431
transcript_55789.known	chr17	+	1058	6	FSM	ENSG00000261879.8	ENST00000667038.1	1058	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	6.20966987850401	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCATCTTGGCGGGACG	-1	True	NA	6	True	AATAAA	-20	NA	5192089	5231761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5192164_5209749_5209896_5214049_5214210_5215146_5215294_5223316_5223485_5231398
transcript_55793.nnic	chr17	+	789	5	NNC	ENSG00000261879.8	novel	1640	6	NA	NA	-22	-8395	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	5.40832691319598	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGAGCACACCTTCCTG	NA	False	NA	4	True	AATAAA	-16	NA	5191984	5215248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_5192164_5209749_5209896_5213014_5213217_5214049_5214210_5215146
transcript_55794.nic	chr17	+	587	4	ISM	ENSG00000261879.8	ENST00000667038.1	1058	6	-105	16513	-22	-8395	5prime_fragment	FALSE	canonical	3	6	junction_2	4.89897948556636	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGAGCACACCTTCCTG	NA	False	NA	4	True	AATAAA	-16	NA	5191984	5215248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_5192164_5209749_5209896_5214049_5214210_5215146
transcript_55796.nnic	chr17	+	621	4	NNC	ENSG00000261879.8	novel	1041	5	NA	NA	0	-8395	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	6.16441400296898	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGAGCACACCTTCCTG	-1	True	NA	4	True	AATAAA	-16	NA	5192006	5215248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_5192164_5213014_5213217_5214049_5214210_5215146
transcript_55797.nnic	chr17	+	448	3	ISM	ENSG00000261879.8	ENST00000573772.3	1041	5	-29	32934	-29	-8395	5prime_fragment	FALSE	canonical	2	4	junction_1	7	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGAGCACACCTTCCTG	NA	False	NA	4	True	AATAAA	-16	NA	5191977	5215248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_5192164_5214049_5214210_5215146
transcript_55798.known	chr17	+	461	3	FSM	ENSG00000029725.17	ENST00000570487.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	140	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTTGCTTCCTCCCTC	NA	False	NA	5	True	AATAAA	-18	NA	5332054	5336689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5332153_5335183_5335345_5336487
transcript_55799.known	chr17	+	5909	18	FSM	ENSG00000029725.17	ENST00000537505.6	5909	18	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_8	42.0262728832423	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAATGTTGAAACATCT	9	True	NA	26	True	AATAAA	-30	NA	5282283	5386340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5282521_5308693_5308823_5331948_5332153_5335183_5335345_5338018_5338139_5346789_5346926_5350450_5350630_5354358_5354491_5361207_5361676_5362911_5363017_5365121_5365239_5368369_5368469_5373313_5373455_5377115_5377306_5378176_5378233_5380363_5380463_5381388_5381506_5383121
transcript_558.known	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	294	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV8001_+_0_8000
transcript_55802.known	chr17	+	995	7	FSM	ENSG00000129197.15	ENST00000381209.8	995	7	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	199.660267009293	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTAAATTTGGTATT	-8	True	NA	5	True	AATAAA	-16	NA	5420181	5432877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541
transcript_55807.known	chr17	+	1394	6	FSM	ENSG00000129197.15	ENST00000381208.9	1394	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	263.455954573056	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5432541
transcript_55810.known	chr17	+	1471	6	FSM	ENSG00000129197.15	ENST00000539417.6	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	293.834919640263	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5428070_5428212_5432541
transcript_55812.known	chr17	+	1688	6	FSM	ENSG00000129197.15	ENST00000571613.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_4	189.100396615131	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5428070_5428212_5432541
transcript_55816.known	chr17	+	1423	6	FSM	ENSG00000129197.15	ENST00000571558.5	1423	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	268.521433036545	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5428070_5428212_5432541
transcript_55819.known	chr17	-	901	6	FSM	ENSG00000108561.8	ENST00000574444.5	901	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2501.37517377942	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTGGTTTATCTCCT	343	False	NA	26	True	NA	NA	NA	5438778	5432800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438708
transcript_55820.known	chr17	-	1169	6	FSM	ENSG00000108561.8	ENST00000225698.8	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	5817	junction_4	306.41775405482	2381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTGTCTTTTTCTAT	-34	True	NA	-4	True	CATAAA	-20	NA	5439155	5432776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438841
transcript_55821.known	chr17	+	815	5	FSM	ENSG00000129197.15	ENST00000327154.10	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	315.623589105757	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCATTCCCTCTGAGG	398	False	NA	-72	True	NA	NA	NA	5419887	5432608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5432541
transcript_55823.known	chr17	+	1547	5	FSM	ENSG00000129197.15	ENST00000571043.5	1547	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	272.371414616145	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426300_5432541
transcript_55826.known	chr17	+	1282	5	FSM	ENSG00000129197.15	ENST00000573577.5	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	338.584830581643	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5426235_5426300_5432541
transcript_55828.known	chr17	+	1359	5	FSM	ENSG00000129197.15	ENST00000575599.5	1359	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	328.80883503945	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTTAAATTTGGTAT	151	False	NA	4	True	AATAAA	-15	NA	5419640	5432876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5428070_5428212_5432541
transcript_55833.known	chr17	+	1057	4	FSM	ENSG00000129197.15	ENST00000536255.6	1057	4	0	0	0	0	multi-exon	TRUE	canonical	3	275	junction_3	248.210931803309	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTTGGTCTTTTGTG	151	False	NA	35	True	AAGAAA	-18	NA	5419640	5432715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5432541
transcript_55837.known	chr17	+	597	3	FSM	ENSG00000129197.15	ENST00000572174.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_2	3.5	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGTAAGATAGTAGTAT	9	True	NA	NA	False	NA	NA	NA	5420166	5423069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768
transcript_55841.known	chr17	+	732	2	FSM	ENSG00000129197.15	ENST00000575711.1	732	2	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGTGTGCCACCATGC	-1	True	NA	NA	False	NA	NA	NA	5420188	5421924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295
transcript_55843.known	chr17	-	2081	11	FSM	ENSG00000108559.12	ENST00000574867.5	2081	11	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_7	45.5126356081473	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGAGGTTGCAGTGAGC	0	True	NA	NA	False	NA	NA	NA	5419662	5388375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_55844.known	chr17	+	2728	5	FSM	ENSG00000129197.15	ENST00000573126.1	2728	5	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_4	183.704926444557	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCCGACATCTGTTCTT	10	True	NA	24	True	AAGAAA	-7	NA	5420199	5432704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5428212_5432541
transcript_55845.known	chr17	-	5535	12	FSM	ENSG00000005100.13	ENST00000225296.8	5535	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	3.24737656354395	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTGTGTGGCTTGTT	11	True	NA	-7	True	ATTAAA	-14	NA	5468982	5440916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5463528_5463690_5468570
transcript_55868.known	chr17	+	945	4	FSM	ENSG00000167842.16	ENST00000576570.5	945	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	49.9955553580071	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCATTTCAAGACTAC	0	True	NA	NA	False	NA	NA	NA	5486384	5488935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5486685_5487556_5487695_5488195_5488590_5488822
transcript_55874.known	chr17	+	2502	3	FSM	ENSG00000167842.16	ENST00000611091.5	2502	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	23.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	-13	True	NA	28	True	ATTAAA	-16	NA	5486565	5490811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5486685_5488195_5488590_5488822
transcript_55877.known	chr17	+	2505	3	FSM	ENSG00000167842.16	ENST00000381165.3	2505	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	54	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTATTTTCTGC	14	False	NA	31	True	ATTAAA	-19	NA	5486926	5490814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5487046_5488195_5488590_5488822
transcript_55881.known	chr17	+	551	2	FSM	ENSG00000167842.16	ENST00000576988.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGTACAAGACTGAATT	NA	False	NA	NA	False	AAGAAA	-15	NA	5486284	5489237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5486421_5488822
transcript_55883.known	chr17	+	2204	2	FSM	ENSG00000167842.16	ENST00000573759.1	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	11	True	NA	-46	True	AATGAA	-24	NA	5486395	5490737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5486685_5488822
transcript_55886.known	chr17	-	4167	7	FSM	ENSG00000072849.11	ENST00000158771.9	4167	7	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_2	52.2390339369582	732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATCTGGTATTTTTAA	-3	True	NA	-2	True	AATAAA	-25	NA	5486178	5471253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_55888.known	chr17	-	1500	2	FSM	ENSG00000286190.2	ENST00000568641.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTCTCCATTAATT	-7	True	NA	-16	True	AATAAA	-23	NA	5501006	5499426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5499951_5500030
transcript_55890.known	chr17	-	2894	6	FSM	ENSG00000129221.16	ENST00000381129.8	2894	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTGTAGGTGTGTT	4	True	NA	NA	False	AATAAA	-16	NA	6435121	6423737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6425831_6426614_6426757_6426880_6427058_6428317_6428507_6433918_6434099_6435008
transcript_55891.known	chr17	-	2783	5	FSM	ENSG00000129221.16	ENST00000250087.9	2783	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.433012701892219	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTGTAGGTGTGTT	8999	False	NA	NA	False	AATAAA	-16	NA	6435199	6423737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6425831_6426614_6426757_6426880_6427058_6433918_6434099_6435008
transcript_55892.known	chr17	-	2111	5	FSM	ENSG00000129221.16	ENST00000575265.5	2111	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAGGGTACAGAAGAGC	4	True	NA	NA	False	AAAACA	-2	NA	6435121	6425304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6426757_6426880_6427058_6428317_6428507_6433918_6434099_6435008
transcript_55895.known	chr17	+	1908	6	FSM	ENSG00000129195.16	ENST00000572447.6	1908	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	326.120223230636	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTGTCACAGATAATAC	1	True	NA	7	True	AATAAA	-18	NA	6444454	6451469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_55896.known	chr17	+	1473	5	FSM	ENSG00000129195.16	ENST00000250056.12	1473	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	398.066812859349	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCCCTTTCACCGG	18	False	NA	23	True	AATAAA	-17	NA	6444440	6451065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450361
transcript_55897.known	chr17	+	1551	6	FSM	ENSG00000129195.16	ENST00000572595.6	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	285.895505386146	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTGACATCTGTTCC	-8	True	NA	13	True	AATAAA	-7	NA	6444445	6451055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6444489_6445075_6445405_6446094_6446188_6447462_6447759_6449311_6449408_6450361
transcript_559.known	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	275	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV8002_+_0_8000
transcript_55903.known	chr17	+	391	4	FSM	ENSG00000129235.11	ENST00000576020.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	1475.55029282863	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACTGTATACTTGCT	185	False	NA	-6	True	NA	NA	NA	6640984	6643067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641101_6641752_6641835_6642248_6642325_6642950
transcript_55905.known	chr17	+	518	4	FSM	ENSG00000129235.11	ENST00000577146.5	518	4	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_1	1557.87469186567	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGCATGTGTCTAAA	248	False	NA	15	True	AATAAA	-11	NA	6641307	6643119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641499_6641752_6641835_6642248_6642325_6642950
transcript_55907.known	chr17	+	505	4	FSM	ENSG00000129235.11	ENST00000573792.5	505	4	0	0	0	0	multi-exon	FALSE	canonical	2	144	junction_1	1513.69489073004	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCATGTGTCTAAAC	406	False	NA	16	True	AATAAA	-12	NA	6641465	6643120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641643_6641752_6641835_6642248_6642325_6642950
transcript_55909.known	chr17	-	619	4	FSM	ENSG00000108590.11	ENST00000574128.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	49.6409329306191	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAATTGTTCTTTGATTT	6337	False	NA	-28	True	AATAGA	-15	NA	6651427	6644294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651348
transcript_55916.known	chr17	+	2100	1	FSM	ENSG00000129235.11	ENST00000574429.1	2100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATGTGTCTAAACAAT	8	False	NA	19	True	AATAAA	-15	NA	6641023	6643123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641000_6643100
transcript_55917.known	chr17	+	1917	4	FSM	ENSG00000129235.11	ENST00000250101.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	2869	junction_3	332.862667710808	17827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	0	True	NA	-41	True	NA	NA	NA	6641059	6644541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641228_6641752_6641835_6642248_6642325_6642950
transcript_55918.known	chr17	+	459	4	FSM	ENSG00000129235.11	ENST00000570330.5	459	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1579.9874120455	3794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTGGCATGTGT	0	True	NA	10	True	AATAAA	-41	NA	6641015	6643114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641153_6641752_6641835_6642248_6642325_6642950
transcript_55919.known	chr17	+	392	3	FSM	ENSG00000129235.11	ENST00000571957.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	3256	junction_1	214	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTCAGAACTCTTTTAA	-4	True	NA	NA	False	TTTAAA	-19	NA	6641026	6642357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641228_6641752_6641835_6642248
transcript_55920.known	chr17	+	616	4	FSM	ENSG00000129235.11	ENST00000574734.5	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1447.1411664228	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGGCATGTGTCT	3	True	NA	12	True	AATAAA	-43	NA	6641033	6643116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641228_6641752_6641933_6642248_6642325_6642950
transcript_55921.known	chr17	-	1629	4	FSM	ENSG00000108590.11	ENST00000225728.8	1629	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	21.4009345590327	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGGTGTGCTCTGCA	-17	True	NA	NA	False	AATAAA	-22	NA	6651605	6643310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651500
transcript_55922.known	chr17	-	593	3	FSM	ENSG00000108590.11	ENST00000575197.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	70	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGGATTTGTAA	6130	False	NA	-12	True	AATAGA	-31	NA	6651634	6644278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6644660_6650355_6650434_6651500
transcript_55924.known	chr17	+	700	4	FSM	ENSG00000274114.2	ENST00000603173.6	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	6.0184900284226	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTAGAATGATCTGAAT	7	True	NA	NA	False	AATAAA	-13	NA	6657303	6658491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6657405_6657644_6657784_6657861_6657985_6658154
transcript_55927.known	chr17	+	1009	4	FSM	ENSG00000274114.2	ENST00000634558.1	1009	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.73488351136175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACACACACACC	5238	False	NA	NA	False	AAAAAG	-36	NA	6657033	6693211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6657405_6657644_6657784_6689875_6690028_6692864
transcript_55928.nic	chr17	+	660	4	NIC	ENSG00000274114.2	novel	700	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	4.54606056566195	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTAGAATGATCTGAAT	-10	True	NA	NA	False	AATAAA	-13	NA	6657286	6658491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657701_6657784_6657861_6657985_6658154
transcript_55933.nic	chr17	+	1050	3	ISM	ENSG00000274114.2	ENST00000603173.6	700	4	-173	-7	-83	7	intron_retention	FALSE	canonical	3	13	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATCTGAATGACTTCA	5335	False	NA	NA	False	AATAAA	-20	NA	6657130	6658498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_6657405_6657644_6657784_6657861
transcript_55934.nnic	chr17	+	642	3	NIC	ENSG00000274114.2	novel	1009	4	NA	NA	-15	-8267	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	3	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTGTCTCTCATGTCT	-8	True	NA	NA	False	AATAAA	-22	NA	6657288	6684944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657644_6657784_6684557
transcript_55935.nnic	chr17	+	1312	3	NIC	ENSG00000274114.2	novel	1009	4	NA	NA	-20	339	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	4.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTTGCACTAAATAAT	-13	True	NA	28	True	AATAAA	-39	NA	6657283	6693916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657644_6657784_6692864
transcript_55936.nnic	chr17	+	714	3	NIC	ENSG00000274114.2	novel	2493	5	NA	NA	-9	-8267	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTGTCTCTCATGTCT	-2	True	NA	NA	False	AATAAA	-22	NA	6657294	6684944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657644_6657862_6684557
transcript_55937.nic	chr17	+	837	3	ISM	ENSG00000274114.2	ENST00000621574.1	984	7	73	2915	-17	7	intron_retention	FALSE	canonical	3	9	junction_1	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATCTGAATGACTTCA	-10	True	NA	NA	False	AATAAA	-20	NA	6657286	6658498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_6657405_6657701_6657784_6657861
transcript_55938.nnic	chr17	+	587	3	NIC	ENSG00000274114.2	novel	984	7	NA	NA	-17	-8267	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTGTCTCTCATGTCT	-10	True	NA	NA	False	AATAAA	-22	NA	6657286	6684944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657701_6657784_6684557
transcript_55939.nnic	chr17	+	1252	3	NIC	ENSG00000274114.2	novel	1009	4	NA	NA	-17	339	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	1	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTTGCACTAAATAAT	-10	True	NA	28	True	AATAAA	-39	NA	6657286	6693916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657701_6657784_6692864
transcript_55941.nic	chr17	+	966	2	ISM	ENSG00000274114.2	ENST00000603173.6	700	4	-11	-7	-11	7	intron_retention	FALSE	canonical	3	16	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATCTGAATGACTTCA	-4	True	NA	NA	False	AATAAA	-20	NA	6657292	6658498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_6657405_6657644
transcript_55949.nic	chr17	+	1167	3	ISM	ENSG00000262943.8	ENST00000574271.6	2490	15	-39	7609	-11	-1752	5prime_fragment	TRUE	canonical	3	4	junction_2	9	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCGTGGTAGCGG	NA	False	NA	NA	False	AATACA	-10	NA	6853849	6892736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_6854061_6854213_6854436_6892002
transcript_55950.nnic	chr17	+	901	3	NNC	ENSG00000262943.8	novel	509	3	NA	NA	-11	5205	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	10.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCTAGGTTCTGAAGC	NA	False	NA	NA	False	ATTAAA	-13	NA	6853849	6864638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_6854061_6854213_6854454_6864188
transcript_55951.nic	chr17	+	1185	3	ISM	ENSG00000262943.8	ENST00000576636.6	574	5	-80	2366	-11	-1752	5prime_fragment	FALSE	canonical	3	17	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCGTGGTAGCGG	NA	False	NA	NA	False	AATACA	-10	NA	6853849	6892736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_6854061_6854213_6854454_6892002
transcript_55957.known	chr17	-	573	4	FSM	ENSG00000215067.11	ENST00000575727.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.55777733351102	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTCGAGCGTCTCAAC	-9	True	NA	NA	False	NA	NA	NA	7012349	6999398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6999587_7002483_7002621_7009795_7009890_7012195
transcript_55959.known	chr17	-	665	3	FSM	ENSG00000215067.11	ENST00000399541.6	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTGGTTTCACTGACT	6	True	NA	NA	False	CATAAA	-22	NA	7012334	6985108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6985541_7009795_7009890_7012195
transcript_55960.known	chr17	-	557	3	FSM	ENSG00000215067.11	ENST00000571010.4	557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTGGTGGGCGGTGA	2	True	NA	NA	False	NA	NA	NA	7012338	6999309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6999587_7002483_7002621_7012195
transcript_55961.known	chr17	-	1730	3	FSM	ENSG00000215067.11	ENST00000399540.2	1730	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAAATTAGCC	-2	True	NA	NA	False	NA	NA	NA	7012342	7001131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7002621_7009795_7009890_7012195
transcript_55962.known	chr17	-	495	2	FSM	ENSG00000215067.11	ENST00000573939.1	495	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTTCTTCCTTGCCT	-9	True	NA	NA	False	NA	NA	NA	7012349	7002279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7002621_7012195
transcript_55963.known	chr17	-	1224	1	FSM	ENSG00000215067.11	ENST00000666062.1	1224	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTAGTTCTTGTCCATT	7121	False	NA	NA	False	AATAAA	-22	NA	7012530	7011306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7011300_7012500
transcript_55970.known	chr17	+	783	4	FSM	ENSG00000219200.12	ENST00000549393.2	783	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	772.124486221116	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTCTTCAGCCCTGT	11	True	NA	18	True	AATAAA	-6	NA	7012647	7014519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012762_7013318_7013536_7013665_7013743_7014144
transcript_55973.known	chr17	+	425	3	FSM	ENSG00000219200.12	ENST00000570898.1	425	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	830	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCTGCACCGTGTCACC	-15	True	NA	NA	False	TTTAAA	-2	NA	7012621	7014330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012762_7013643_7013743_7014144
transcript_55979.known	chr17	+	1485	2	FSM	ENSG00000219200.12	ENST00000552176.2	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	9	True	NA	31	True	AATAAA	-19	NA	7012645	7014532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7013743_7014144
transcript_55980.known	chr17	+	1856	7	FSM	ENSG00000161939.19	ENST00000549775.5	1856	7	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_3	469.833540262459	9423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGATTTCCCTCTCAGC	-2	True	NA	12	True	AAAACA	-1	NA	7012634	7017502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012762_7013665_7013743_7014144_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_55981.known	chr17	+	595	3	FSM	ENSG00000219200.12	ENST00000552842.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	831	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGTGTCTGTGCTTG	9	True	NA	29	True	AATAAA	-17	NA	7012645	7014530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012778_7013665_7013743_7014144
transcript_55982.known	chr17	+	1662	8	FSM	ENSG00000161939.19	ENST00000547863.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	408.481058936891	4490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	23	True	NA	30	True	AATAAA	-14	NA	7012659	7017520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012758_7013665_7013743_7014144_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_55983.known	chr17	+	739	3	FSM	ENSG00000219200.12	ENST00000552321.2	739	3	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	794.5	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	1	True	NA	19	True	AATAAA	-7	NA	7013230	7014520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7013517_7013665_7013743_7014144
transcript_55984.known	chr17	+	760	5	FSM	ENSG00000258315.5	ENST00000552402.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	239.804086704126	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	12	False	NA	29	True	AATAAA	-13	NA	7014768	7017519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017260
transcript_55985.known	chr17	+	764	5	FSM	ENSG00000258315.5	ENST00000546760.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	254.37410933505	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCCTCTCAGCTTCG	-4	True	NA	16	True	AAAACA	-5	NA	7014752	7017506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017256
transcript_55986.known	chr17	+	2343	3	FSM	ENSG00000258315.5	ENST00000549857.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_2	62	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTCTGCTTAACATTA	-3	True	NA	35	True	AATAAA	-19	NA	7014753	7017525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7014879_7015061_7017015_7017260
transcript_55987.known	chr17	+	850	6	FSM	ENSG00000258315.5	ENST00000439424.6	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	67.8987481475174	3986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	-16	True	NA	30	True	AATAAA	-14	NA	7014781	7017520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_55988.known	chr17	+	779	5	FSM	ENSG00000258315.5	ENST00000552775.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	171.80566783433	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	-19	True	NA	30	True	AATAAA	-14	NA	7015039	7017520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017256
transcript_55989.known	chr17	+	430	4	FSM	ENSG00000258315.5	ENST00000547747.1	430	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	274.840964114805	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGCTGTCTGCTTAAC	341	False	NA	31	True	AATAAA	-15	NA	7015842	7017521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7015876_7016494_7016526_7016909_7017015_7017260
transcript_55990.known	chr17	+	3527	9	FSM	ENSG00000161940.11	ENST00000293805.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	4.23526858652435	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTCCTGGGTTCT	-1	True	NA	12	True	AATAAA	-18	NA	7023049	7029644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7027502
transcript_55992.known	chr17	+	1804	4	FSM	ENSG00000174327.7	ENST00000308027.7	1804	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGAGGACTCT	7	True	NA	NA	False	GGGGCT	-25	NA	7036014	7040117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7036582_7036726_7036871_7038151_7038890_7039762
transcript_55994.nic	chr17	+	1164	2	ISM	ENSG00000174327.7	ENST00000308027.7	1804	4	34	2760	34	293	5prime_fragment	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGAAACCAAGTATACA	-19	True	NA	NA	False	NA	NA	NA	7036048	7037357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_7036582_7036726
transcript_55995.nic	chr17	-	511	2	ISM	ENSG00000174326.15	ENST00000574600.3	1726	5	1874	0	1388	0	3prime_fragment	FALSE	canonical	1	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAACTGTTCACCAATC	1874	False	NA	NA	False	AATAAA	-26	NA	7042218	7041620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_7041909_7041995
transcript_55996.known	chr17	-	927	2	FSM	ENSG00000174326.15	ENST00000573338.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCCCAATAAAGAATTTT	486	False	NA	NA	False	NA	NA	NA	7043606	7041658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7041909_7042929
transcript_55998.known	chr17	-	944	8	FSM	ENSG00000141505.12	ENST00000380920.8	944	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	11.2231539093728	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAAGGATAGGGTGA	1436	False	NA	-87	True	NA	NA	NA	7178116	7173552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178084
transcript_56.known	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	555	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00131_+_0_800
transcript_560.known	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV8003_+_0_8000
transcript_56006.known	chr17	-	1894	2	FSM	ENSG00000132535.22	ENST00000489885.1	1894	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGGCCTGGTTA	14	True	NA	NA	False	NA	NA	NA	7192235	7189889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7190815_7191266
transcript_56007.known	chr17	+	903	9	FSM	ENSG00000072778.20	ENST00000583850.5	903	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_5	270.874942316561	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCATGCTTTGCTCCTGTG	718	False	NA	10	True	AATAAA	-12	NA	7223686	7225261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224483_7224553_7224641_7224715_7224808_7224885_7224956
transcript_56008.known	chr17	+	1016	9	FSM	ENSG00000072778.20	ENST00000542255.6	1016	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	298.092660719784	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	229	False	NA	15	True	AATAAA	-17	NA	7223197	7225266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7223238_7223643_7223731_7223812_7223876_7223967_7224070_7224145_7224244_7224320_7224394_7224479_7224553_7224714_7224885_7224956
transcript_56009.known	chr17	+	709	5	FSM	ENSG00000072778.20	ENST00000578809.5	709	5	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_1	85.4908620847866	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	1248	False	NA	15	True	AATAAA	-17	NA	7224216	7225266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_56010.known	chr17	+	562	2	FSM	ENSG00000072778.20	ENST00000578033.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_1	0	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	1664	False	NA	15	True	AATAAA	-17	NA	7224632	7225266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7224885_7224956
transcript_56013.known	chr17	-	2659	15	FSM	ENSG00000004975.12	ENST00000575458.5	2659	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	146.628104469805	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGACAGCAGCCTGAGGA	8683	False	NA	-64	True	NA	NA	NA	7234318	7225454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230138_7230284_7230431_7230727_7230798_7234068
transcript_56015.known	chr17	-	615	3	FSM	ENSG00000004975.12	ENST00000574591.1	615	3	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	23.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAAGTGCT	8848	False	NA	NA	False	NA	NA	NA	7229406	7228599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7229046_7229134_7229275_7229377
transcript_56026.known	chr17	-	1662	5	FSM	ENSG00000040633.13	ENST00000454255.6	1662	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	278.172046582686	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTCCCCTCCCTCATCT	4071	False	NA	-28	True	TATAAA	-18	NA	7238930	7235286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7238785
transcript_5604.known	chr1	-	6457	8	FSM	ENSG00000116209.12	ENST00000234831.10	6457	8	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_7	151.553721868666	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATCTTGTAAAAGTGTC	16	True	NA	-11	True	AATAAA	-28	NA	54053204	54026680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
transcript_56040.known	chr17	-	1768	5	FSM	ENSG00000040633.13	ENST00000571362.5	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	253.626078115008	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCACTGTCCTGCTCG	4	True	NA	-4	True	AATAAA	-26	NA	7239439	7235028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7235841_7235929_7236567_7237384_7237478_7237628_7237661_7239245
transcript_56041.known	chr17	-	1978	5	FSM	ENSG00000040633.13	ENST00000320316.8	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_4	89.0066710982946	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-14	True	NA	-13	True	AATAAA	-17	NA	7239457	7235037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7239245
transcript_56043.known	chr17	+	1389	9	FSM	ENSG00000170291.16	ENST00000396627.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	225.729373365541	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	19	False	NA	NA	False	AATAAA	-28	NA	7252231	7259940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_56045.known	chr17	+	1423	8	FSM	ENSG00000170291.16	ENST00000396628.7	1491	8	71	-3	0	0	multi-exon	FALSE	canonical	3	201	junction_6	202.846679810649	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_56048.known	chr17	+	1083	7	FSM	ENSG00000170291.16	ENST00000570322.6	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	245.664687916047	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	-14	True	NA	NA	False	AATAAA	-28	NA	7252524	7259940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7259570
transcript_5605.known	chr1	-	1116	8	FSM	ENSG00000116209.12	ENST00000371341.5	1116	8	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_7	227.108982199997	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGATGTTTGGGATTGT	NA	False	NA	28	True	NA	NA	NA	54053504	54031965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
transcript_56050.known	chr17	+	2209	6	FSM	ENSG00000170291.16	ENST00000574993.6	2209	6	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_4	194.8790394065	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587
transcript_5606.known	chr1	-	600	3	FSM	ENSG00000116209.12	ENST00000371337.3	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_2	101.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTATTTTGTTTCTTC	274	False	NA	NA	False	ATTAAA	-18	NA	54053192	54045485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54045787_54047266_54047373_54052999
transcript_56062.known	chr17	+	473	5	FSM	ENSG00000170291.16	ENST00000570500.6	473	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	268.801506692206	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGCCTTTCCTGGGGGGC	24	False	NA	NA	False	NA	NA	NA	7252236	7254633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252346_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_56064.known	chr17	-	605	5	FSM	ENSG00000181885.18	ENST00000575313.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	656.774504681782	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCCTGGGAGGTGCAC	0	True	NA	NA	False	NA	NA	NA	7263200	7260488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262086_7263158
transcript_56067.known	chr17	-	1228	5	FSM	ENSG00000181885.18	ENST00000397317.8	1228	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	630.434919321574	2965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTTCCCTTCAGGG	756	False	7263223	-52	True	AATAAA	-19	NA	7263213	7260136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262344_7263158
transcript_56077.known	chr17	+	687	4	FSM	ENSG00000170291.16	ENST00000573657.6	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	57.567351858497	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTTCATTTTTTTG	97	False	NA	32	True	AATAAA	-20	NA	7252375	7254906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582
transcript_5608.known	chr1	+	10429	5	FSM	ENSG00000116205.14	ENST00000234827.6	10429	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	8.83176086632785	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGGTGGGCTGCATTTG	1	True	NA	6	True	AATAAA	-17	NA	54053607	54106082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54053759_54054380_54054525_54068755_54068898_54088596_54088791_54096284
transcript_56080.known	chr17	-	762	4	FSM	ENSG00000170296.10	ENST00000577035.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	1006.68796886953	2208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGCTCCCCTCGTC	1	True	NA	-10	True	AATAAA	-32	NA	7241819	7240407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7241767
transcript_56083.known	chr17	-	568	4	FSM	ENSG00000170296.10	ENST00000571129.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	1086.21677803691	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCCTGCTGTAGACTTC	9978	False	NA	NA	False	NA	NA	NA	7242156	7240627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242078
transcript_56096.known	chr17	-	583	3	FSM	ENSG00000170296.10	ENST00000570856.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	1211	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTCTGTTCCCTTTC	33	True	NA	NA	False	NA	NA	NA	7242358	7240573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7240920_7241341_7241461_7242240
transcript_56099.known	chr17	-	1319	4	FSM	ENSG00000170296.10	ENST00000302386.10	1319	4	0	0	0	0	multi-exon	FALSE	canonical	3	1716	junction_3	310.935148651076	8838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTTGGCTAGACTTTT	-58	True	NA	NA	False	AGTAAA	-20	NA	7242449	7240007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242240
transcript_56100.known	chr17	-	1767	8	FSM	ENSG00000175826.12	ENST00000574322.6	1767	8	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_4	55.8964056381563	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTTAGGTCCTTCTCT	-13	True	NA	-6	True	TTTAAA	-27	NA	7251734	7243590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194
transcript_56101.known	chr17	-	1549	9	FSM	ENSG00000175826.12	ENST00000318988.10	1549	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	211.240976138627	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTGTGATTTGATTT	12	True	NA	-16	True	NA	NA	NA	7251961	7243838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194_7251602_7251798
transcript_56102.known	chr17	+	671	5	FSM	ENSG00000170291.16	ENST00000574255.6	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	255.198452189664	3048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTTTTGACTTTTT	1077	False	NA	39	True	AATAAA	-27	NA	7252055	7254913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_56103.known	chr17	+	1304	9	FSM	ENSG00000170291.16	ENST00000354429.7	1522	9	252	-34	-3	0	multi-exon	FALSE	canonical	3	40	junction_1	222.044160866707	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	1074	False	NA	NA	False	AATAAA	-19	NA	7252052	7259931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_56104.known	chr17	-	1542	4	FSM	ENSG00000181885.18	ENST00000360325.11	1542	4	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_3	55.6496980125579	7526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGTTCTACTCTCTC	0	True	NA	-30	True	AATAAA	-24	NA	7262478	7259902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820
transcript_56105.known	chr17	+	3375	11	FSM	ENSG00000181856.15	ENST00000317370.13	3375	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	4.73392015141785	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAAGCCTGTTTTTGTTTT	-17	True	NA	NA	False	AAAACA	-25	NA	7281717	7288257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704_7285909_7286425
transcript_56106.known	chr17	+	1768	10	FSM	ENSG00000181856.15	ENST00000571308.5	1768	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.64471543707927	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGCATTAATACTACAA	1	True	NA	-8	True	AATAAA	-8	NA	7281735	7286151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704
transcript_5611.nic	chr1	+	753	4	ISM	ENSG00000116205.14	ENST00000234827.6	10429	5	-36	17206	-12	-7617	5prime_fragment	FALSE	canonical	3	48	junction_2	10.1980390271856	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTAGTAGGTGCTCTT	-35	True	NA	NA	False	AATAAA	-19	NA	54053571	54088876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_54053759_54054380_54054525_54068755_54068898_54088596
transcript_56114.known	chr17	-	1176	11	FSM	ENSG00000132522.16	ENST00000380728.7	1176	11	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_10	182.755574470384	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	-8	True	NA	-8	True	AATAAA	-16	NA	7315360	7312660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330
transcript_56128.known	chr17	+	1256	6	FSM	ENSG00000132507.18	ENST00000336452.11	1256	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	4199.86728361742	9964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	5	True	NA	-42	True	AATAAA	-28	NA	7306998	7312463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7307116_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_56133.known	chr17	+	1264	6	FSM	ENSG00000132507.18	ENST00000336458.13	1264	6	0	0	0	0	multi-exon	FALSE	canonical	3	9070	junction_1	611.167603853477	16711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	-6	True	NA	-42	True	AATAAA	-28	NA	7307627	7312463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_56139.known	chr17	+	1336	6	FSM	ENSG00000132507.18	ENST00000416016.2	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	4162.27963500772	10163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	12	True	NA	38	True	AATAAA	-20	NA	7308370	7312455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_5614.nnic	chr1	+	736	3	NNC	ENSG00000116205.14	novel	2538	5	NA	NA	-5	-41083	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	24.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTGTACTTAGTCCCCT	-28	True	NA	NA	False	AATAAA	-36	NA	54053578	54055410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_54053759_54054380_54054525_54054998
transcript_56149.known	chr17	+	1271	6	FSM	ENSG00000132507.18	ENST00000419711.6	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	1515	junction_1	3625.28407714485	10188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	-18	True	NA	38	True	AATAAA	-20	NA	7307973	7312455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7308114_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_5615.nnic	chr1	+	721	3	NNC	ENSG00000116205.14	novel	2538	5	NA	NA	-12	-38728	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAAGGCCTTCCATGAC	-35	True	NA	NA	False	AATAAA	-21	NA	54053571	54057765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_54053759_54054380_54054525_54057375
transcript_56150.known	chr17	-	573	5	FSM	ENSG00000132522.16	ENST00000573684.5	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	425.863461099916	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTGCTGCTGTTTGT	1631	False	NA	-7	True	AATAAA	-17	NA	7313721	7312659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7312840_7313028_7313098_7313211_7313292_7313379_7313470_7313567
transcript_56151.known	chr17	-	823	3	FSM	ENSG00000132522.16	ENST00000573807.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_2	16.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCTGCTGCTGTTTGTG	1595	False	NA	-6	True	AATAAA	-18	NA	7313757	7312658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7312840_7313028_7313125_7313211
transcript_56152.known	chr17	+	2511	22	FSM	ENSG00000072818.12	ENST00000158762.8	2511	22	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_2	11.1948319790227	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	-14	True	NA	21	True	ATTAAA	-21	NA	7336528	7351477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
transcript_56157.known	chr17	+	761	5	FSM	ENSG00000072818.12	ENST00000576628.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	9.16515138991168	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	6	False	NA	NA	False	ACTAAA	-14	NA	7336596	7342753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415
transcript_56159.nic	chr17	+	1064	4	NIC	ENSG00000072818.12	novel	761	5	NA	NA	-28	0	intron_retention	FALSE	canonical	3	78	junction_2	10.4986771653491	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	NA	False	NA	NA	False	ACTAAA	-14	NA	7336500	7342753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_7336788_7337311_7337370_7341947_7342329_7342415
transcript_5616.nnic	chr1	+	1317	3	NNC	ENSG00000116205.14	novel	2538	5	NA	NA	-5	-38125	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	25.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGTGCTGTATCATGG	-28	True	NA	NA	False	ATTAAA	-20	NA	54053578	54058368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_54053759_54054380_54054525_54057375
transcript_56162.known	chr17	+	274	3	FSM	ENSG00000072818.12	ENST00000570504.5	274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	28	False	NA	21	True	ATTAAA	-21	NA	7350389	7351477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7350431_7350949_7351000_7351294
transcript_56164.known	chr17	+	412	3	FSM	ENSG00000072818.12	ENST00000574499.1	412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	59	False	NA	21	True	ATTAAA	-21	NA	7350420	7351477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7350600_7350949_7351000_7351294
transcript_56166.known	chr17	+	3051	1	FSM	ENSG00000213859.8	ENST00000576980.2	3051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTTGTGAAGGCTGTT	54	False	NA	8	True	AATAAA	-16	NA	7351888	7354939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7351900_7354900
transcript_56167.known	chr17	-	2032	8	FSM	ENSG00000187838.17	ENST00000574401.5	2032	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	80.1299964216311	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	26	True	NA	-7	True	TATAAA	-20	NA	7394807	7389732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394272_7394476
transcript_56169.known	chr17	-	1740	7	FSM	ENSG00000187838.17	ENST00000573070.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	95.6302195380147	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-9	True	NA	-1	True	TATAAA	-26	NA	7394842	7389726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394160_7394476
transcript_5618.nic	chr1	+	1194	3	ISM	ENSG00000116205.14	ENST00000234827.6	10429	5	-36	36464	-12	-26875	5prime_fragment	FALSE	canonical	3	48	junction_2	3	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACTTAGAGTTTGGTA	-35	True	NA	NA	False	NA	NA	NA	54053571	54069618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_54053759_54054380_54054525_54068755
transcript_56196.known	chr17	-	581	5	FSM	ENSG00000187838.17	ENST00000573213.1	581	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	88.2057254377515	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTCCATCCAGGATGC	-12	True	NA	NA	False	NA	NA	NA	7394545	7392883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7392953_7393466_7393510_7393600_7393837_7394103_7394268_7394476
transcript_56197.known	chr17	-	446	4	FSM	ENSG00000205544.4	ENST00000302422.4	446	4	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_3	41.1204193666467	10648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	-1	True	NA	-23	True	AATAAA	-1	NA	7404097	7402974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7403210_7403309_7403391_7403657_7403690_7403999
transcript_56198.known	chr17	+	2560	11	FSM	ENSG00000170175.11	ENST00000306071.7	2560	11	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_2	32.5699247773156	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCATTGGTAATGAGAA	-25	True	NA	14	True	ATTAAA	-18	NA	7445060	7457710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_56203.known	chr17	+	1623	10	FSM	ENSG00000170175.11	ENST00000536404.6	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	16.7994708911389	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATCTTGAAGAAGCTC	-14	True	NA	NA	False	NA	NA	NA	7445502	7456926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_56208.nic	chr17	+	2115	9	NIC	ENSG00000170175.11	novel	1623	10	NA	NA	-15	-97	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	30.4197201663658	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	-29	True	NA	23	True	AATAAA	-32	NA	7445487	7457613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_56213.known	chr17	+	2315	5	FSM	ENSG00000161958.11	ENST00000575082.5	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.1245437895437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	-4	True	NA	-12	True	NA	NA	NA	7440742	7444902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_56217.nic	chr17	+	2626	4	ISM	ENSG00000161958.11	ENST00000575082.5	2315	5	7	-35	7	0	intron_retention	FALSE	canonical	3	20	junction_1	19.2930615046504	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGTCTGTCATCTGTCG	3	True	NA	23	True	ATTAAA	-20	NA	7440749	7444937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593
transcript_56218.known	chr17	+	1095	2	FSM	ENSG00000170175.11	ENST00000575379.1	1095	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTTCACTGCAGCA	16	False	NA	NA	False	NA	NA	NA	7455593	7457329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7455942_7456582
transcript_56219.known	chr17	-	5956	4	FSM	ENSG00000174282.12	ENST00000311403.4	5956	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	21.1397466609439	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGCCAGGTGCAATT	-22	True	NA	-5	True	AATAAA	-30	NA	7484263	7459365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7484003
transcript_5622.known	chr1	-	3276	18	FSM	ENSG00000157216.16	ENST00000610401.5	3276	18	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	50.3013754653133	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-2	True	NA	-23	True	ATTAAA	-19	NA	54406419	54225432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54258068_54258150_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_56220.known	chr17	+	6751	29	FSM	ENSG00000181222.19	ENST00000617998.6	6751	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	171.558265672069	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTACATCGAGTGCTTC	0	True	NA	98	True	AATAAA	-22	NA	7484365	7514616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7484858_7495940_7496074_7496209_7496347_7496439_7496614_7496763_7497046_7497355_7497518_7497649_7497871_7498077_7498211_7499038_7499164_7499280_7499492_7500638_7500849_7500939_7501109_7501288_7501384_7501525_7501730_7501899_7502123_7502517_7502702_7503120_7503293_7503384_7503491_7503585_7503792_7508250_7508476_7508943_7509191_7509531_7509633_7511214_7511320_7511405_7511589_7511810_7512015_7512157_7512345_7512476_7512591_7512773_7512924_7513020
transcript_56221.known	chr17	+	548	3	FSM	ENSG00000181222.19	ENST00000576718.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	13	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCACGCTGCTCTTCA	3856	False	NA	NA	False	NA	NA	NA	7502920	7503655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7503293_7503384_7503491_7503585
transcript_56223.nic	chr17	+	1444	8	NIC	ENSG00000161955.17	novel	1593	7	NA	NA	-48	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_7	7.89988375011342	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	65	False	NA	8	True	AATAAA	-16	NA	7558243	7561601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_7558376_7559067_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723_7560818_7560998
transcript_56225.nnic	chr17	+	1414	7	NNC	ENSG00000239697.11	novel	522	6	NA	NA	-419	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.2825245151302	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCATAGTCTCTCTCTT	NA	False	NA	NA	False	ATTAAA	-6	NA	7548638	7557881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_7548931_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
transcript_56226.known	chr17	+	1377	7	FSM	ENSG00000239697.11	ENST00000293825.11	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.88075958812578	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCATAGTCTCTCTCTT	-4	True	NA	NA	False	ATTAAA	-6	NA	7549057	7557881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
transcript_56229.nic	chr17	+	1587	7	NIC	ENSG00000161955.17	novel	1593	7	NA	NA	-10	0	intron_retention	FALSE	canonical	3	6	junction_1	6.37704215656966	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	5	True	NA	8	True	AATAAA	-16	NA	7558281	7561601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_7558376_7559067_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_56237.known	chr17	+	959	5	FSM	ENSG00000161955.17	ENST00000483039.5	959	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.23309265630969	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCATCTATCGGACCCC	15	False	NA	NA	False	NA	NA	NA	7558291	7561292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7558376_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_56264.known	chr17	+	1311	8	FSM	ENSG00000129214.15	ENST00000340624.9	1311	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.1189138534559	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATTATTCATTTATTCA	-14	True	NA	NA	False	ATTAAA	-30	NA	7627968	7633382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7628152_7630415_7630508_7630679_7630870_7631199_7631362_7631588_7631749_7631878_7632016_7632751_7632960_7633203
transcript_56273.known	chr17	+	1705	6	FSM	ENSG00000129226.14	ENST00000250092.11	1705	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.83303027798234	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTTTCTATGCCTTCC	16	True	NA	NA	False	ATTAAA	-20	NA	7579637	7582111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7579727_7579809_7580328_7580465_7580586_7580710_7580784_7580895_7581067_7581377
transcript_56278.known	chr17	+	900	5	FSM	ENSG00000129255.16	ENST00000574558.1	900	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	185.939506291697	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAGAGTGGAGGGACTG	42	False	NA	NA	False	NA	NA	NA	7583894	7587938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7583966_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_5628.known	chr1	-	2784	17	FSM	ENSG00000157216.16	ENST00000371319.8	2784	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_12	68.1789637186574	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	7473	False	NA	-23	True	ATTAAA	-19	NA	54406008	54225432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_56292.known	chr17	-	1050	3	FSM	ENSG00000129194.8	ENST00000538513.6	1050	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	22	False	NA	-5	True	ATTAAA	-19	NA	7590072	7588177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7588547_7589143_7589739_7589986
transcript_56294.known	chr17	-	535	3	FSM	ENSG00000141504.12	ENST00000576579.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	195	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGGTGTTGGGTCTT	362	False	NA	NA	False	AATAAA	-16	NA	7627479	7626237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7627362
transcript_56296.known	chr17	-	679	2	FSM	ENSG00000233223.4	ENST00000690435.1	1442	2	259	504	12	-497	multi-exon	FALSE	canonical	3	18	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTGGACAGGACAGGA	27	True	NA	NA	False	NA	NA	NA	7583518	7582471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7582532_7582899
transcript_56297.known	chr17	-	287	2	FSM	ENSG00000233223.4	ENST00000572046.2	1058	2	732	39	520	-37	multi-exon	FALSE	canonical	2	4	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCGTCACATTTAATAA	7084	False	NA	-48	True	CATAAA	-35	NA	7583010	7582011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7582164_7582875
transcript_56298.known	chr17	-	299	2	FSM	ENSG00000233223.4	ENST00000417897.2	371	2	30	42	4	-41	multi-exon	FALSE	canonical	0	0	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCAGTTCGTCACATTTA	6026	False	NA	-52	True	CATAAA	-31	NA	7584068	7582015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7582164_7583917
transcript_56299.known	chr17	-	1320	2	FSM	ENSG00000129194.8	ENST00000250055.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	0	True	NA	-5	True	ATTAAA	-19	NA	7590094	7588177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7588547_7589143
transcript_56301.known	chr17	+	1440	1	FSM	ENSG00000161960.16	ENST00000584798.1	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTGCGTGATGAGGC	31	False	NA	NA	False	AAAAAG	-11	NA	7574745	7576185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7574700_7576200
transcript_56302.known	chr17	-	1563	1	FSM	ENSG00000141504.12	ENST00000576846.1	1563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	45	False	NA	NA	False	AATAAA	-20	NA	7627796	7626233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626200_7627800
transcript_56303.known	chr17	+	1758	11	FSM	ENSG00000161960.16	ENST00000293831.13	1758	11	0	0	0	0	multi-exon	FALSE	canonical	3	9200	junction_1	996.406187254977	33095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGCTTCTCATTTCT	-1	True	NA	20	True	AATAAA	-18	NA	7572824	7579006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
transcript_56304.known	chr17	+	1319	11	FSM	ENSG00000161960.16	ENST00000577269.5	1319	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	3555.16880611878	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	11	False	NA	-33	True	AATAAA	-35	NA	7572836	7578641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578226_7578245_7578341
transcript_56305.known	chr17	+	1645	10	FSM	ENSG00000161960.16	ENST00000582746.5	1645	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_9	3608.75604914245	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAAACTGCCTGTT	16	False	NA	4	True	AATAAA	-2	NA	7572841	7578990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578341
transcript_56306.known	chr17	+	1577	9	FSM	ENSG00000161960.16	ENST00000578324.5	1577	9	0	0	0	0	multi-exon	FALSE	canonical	3	10834	junction_4	726.94050650655	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGCAAAAGAAGGAACC	325	False	NA	36	True	AATAAA	-10	NA	7574258	7578616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7578245_7578341
transcript_56307.known	chr17	-	725	2	FSM	ENSG00000233223.4	ENST00000655859.2	745	2	12	8	12	-1	multi-exon	FALSE	canonical	3	19	junction_1	0	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGACTGCATTATCTC	0	True	NA	-12	True	AATAAA	-16	NA	7584086	7581975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7582532_7583917
transcript_56308.known	chr17	+	1645	5	FSM	ENSG00000129255.16	ENST00000577088.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_4	21.1704392963396	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATAATACAAAACTGTT	-1	True	NA	-22	True	AATAAA	-15	NA	7583851	7588177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7587272_7587425
transcript_56309.known	chr17	+	938	7	FSM	ENSG00000129214.15	ENST00000574539.5	938	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.54405625374562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACCTAAGAACCCCCTT	32	False	NA	NA	False	ATTAAA	-2	NA	7614063	7633354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7614112_7630417_7630508_7630679_7630870_7631199_7631362_7631588_7631749_7631878_7632016_7633203
transcript_56310.known	chr17	-	912	6	FSM	ENSG00000141504.12	ENST00000269298.10	912	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	113.118345108121	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	20	True	NA	NA	False	AATAAA	-20	NA	7627821	7626233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
transcript_56311.known	chr17	-	974	6	FSM	ENSG00000141504.12	ENST00000380466.6	974	6	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	99.2298342233826	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGTGTTGGGTCTTT	-28	True	NA	NA	False	AATAAA	-17	NA	7627869	7626236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627552
transcript_56312.known	chr17	-	640	5	FSM	ENSG00000141504.12	ENST00000573566.1	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	114.298950126412	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGACTACGTCCACAG	36	True	NA	NA	False	NA	NA	NA	7627805	7626387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627569
transcript_56313.known	chr17	-	582	5	FSM	ENSG00000141504.12	ENST00000576686.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	91.3848318923879	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAGCCCAAGATCTGAC	-35	True	NA	NA	False	NA	NA	NA	7627876	7626533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627552
transcript_56314.known	chr17	+	1267	8	FSM	ENSG00000129214.15	ENST00000380450.9	1267	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.8405855323893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGTTACTGATTATT	-6	True	NA	NA	False	ATTAAA	-20	NA	7630134	7633372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7630284_7630415_7630508_7630679_7630870_7631199_7631362_7631588_7631749_7631878_7632016_7632751_7632960_7633203
transcript_56315.known	chr17	+	916	8	FSM	ENSG00000161960.16	ENST00000578495.5	916	8	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	3974.8903822647	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCCCGCTGCCAG	0	True	NA	NA	False	NA	NA	NA	7572825	7577706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576529_7576693_7577055_7577166_7577343_7577488_7577568
transcript_56316.known	chr17	+	809	7	FSM	ENSG00000129255.16	ENST00000576272.5	809	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	155.326537762654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCCTCTGCACTTGC	32	False	NA	NA	False	NA	NA	NA	7583884	7587643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_56317.known	chr17	+	3341	7	FSM	ENSG00000129244.9	ENST00000250111.9	3341	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	19.8221256848671	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGGGTTGTTC	1	True	NA	16	True	AATAAA	-41	NA	7650925	7657770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7651631_7653373_7653503_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
transcript_56321.known	chr17	-	2653	12	FSM	ENSG00000141510.18	ENST00000420246.6	2653	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	108.897859490685	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGCCAGTGCAGGCTAC	7	True	NA	-2	True	AATAAA	-30	NA	7687481	7668403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7669691_7670608_7670716_7673206_7673340_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
transcript_56324.known	chr17	+	2657	11	FSM	ENSG00000141499.17	ENST00000498311.5	2657	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	74.4586462407154	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGAGTCTTCGTGTCTGT	165	False	NA	13	True	TATAAA	-15	NA	7687599	7703501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701426_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_56326.known	chr17	+	1749	11	FSM	ENSG00000141499.17	ENST00000396463.7	1749	11	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	20.2605528058837	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	16	True	NA	14	True	TATAAA	-16	NA	7688476	7703502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_56329.known	chr17	-	2506	11	FSM	ENSG00000141510.18	ENST00000445888.6	2506	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	83.3076227004468	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	1	True	NA	-19	True	AATAAA	-13	NA	7687487	7668420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676620_7687376
transcript_5634.known	chr1	-	454	3	FSM	ENSG00000157216.16	ENST00000448572.1	454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAACAAAATTTACCATT	15	False	NA	NA	False	AGTAAA	-5	NA	54413466	54412707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54412878_54413080_54413254_54413355
transcript_56342.nic	chr17	-	1167	4	ISM	ENSG00000141510.18	ENST00000604348.5	568	5	-60	239	-9	-172	5prime_fragment	FALSE	canonical	3	224	junction_3	33.7177829770714	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAAGCTCCTGA	47	False	NA	NA	False	NA	NA	NA	7687547	7675400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_7676273_7676381_7676404_7676520_7676623_7687376
transcript_56347.known	chr17	-	1112	1	FSM	ENSG00000141510.18	ENST00000571370.1	1112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTACAATTCTTTTTG	1223	False	NA	-20	True	AATAAA	-14	NA	7686371	7685259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7685300_7686400
transcript_56348.known	chr17	-	1883	12	FSM	ENSG00000141510.18	ENST00000635293.1	1883	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	108.520935254124	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTGTGGGTTTTT	-3	True	NA	-4	True	ATTAAA	-14	NA	7687491	7665415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7665532_7666901_7667426_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
transcript_56349.known	chr17	+	4011	10	FSM	ENSG00000141499.17	ENST00000316024.9	4011	10	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	18.3491514251938	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7686300	7703502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_56350.nnic	chr17	-	1258	2	Antisense	novelGene_ENSG00000132510.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGATTTTCAGGGGT	6094	False	NA	-33	True	AATAAA	-21	NA	7851850	7850457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_-_7851322_7851456
transcript_56353.known	chr17	+	874	2	FSM	ENSG00000167874.7	ENST00000301599.7	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCTCTGCGAACAGAGGC	1	True	NA	9	True	AATAAA	-17	NA	7855065	7856099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7855285_7855444
transcript_56354.known	chr17	+	510	2	FSM	ENSG00000167874.7	ENST00000574668.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGTCCACGCATCAATA	1	True	NA	-29	True	GGGGCT	-23	NA	7855065	7856061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7855285_7855770
transcript_56358.known	chr17	-	556	5	FSM	ENSG00000183011.14	ENST00000576861.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	208.662856062118	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCCTGTGTCTGTGTGT	5501	False	NA	-5	True	ATTAAA	-12	NA	7885209	7856685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7857014_7857199_7866490_7866559_7883234_7883336_7885164
transcript_56359.known	chr17	+	3489	4	FSM	ENSG00000182224.12	ENST00000332439.5	3489	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	2.62466929133727	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAACTCATCCGT	-31	True	NA	10	True	AATAAA	-18	NA	7858002	7862282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859381
transcript_56361.known	chr17	+	1870	4	FSM	ENSG00000182224.12	ENST00000571846.5	1870	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	21.0765799460496	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGAAACTTTGGAAAGTTTAA	20	True	NA	NA	False	NA	NA	NA	7857745	7860474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859449
transcript_56369.known	chr17	+	538	3	FSM	ENSG00000182224.12	ENST00000574196.1	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGATCCGGGATGAGGAG	251	False	NA	NA	False	NA	NA	NA	7858284	7859505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7858480_7858605_7858825_7859381
transcript_56381.known	chr17	+	1975	2	FSM	ENSG00000170004.18	ENST00000682344.1	1975	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCTCAGGTTCCTGGAAGA	39	False	NA	NA	False	AATACA	-32	NA	7909937	7912402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7910974_7911463
transcript_56382.known	chr17	-	424	2	FSM	ENSG00000183011.14	ENST00000576384.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATGACCGAATGGGCC	-59	True	NA	-18	True	NA	NA	NA	7857263	7856698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7856984
transcript_56383.known	chr17	-	520	3	FSM	ENSG00000183011.14	ENST00000575771.6	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	89	5489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-40	True	NA	-4	True	ATTAAA	-13	NA	7857559	7856684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7857014_7857199_7857382
transcript_56384.known	chr17	-	553	3	FSM	ENSG00000183011.14	ENST00000575071.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	116	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-43	True	NA	-4	True	ATTAAA	-13	NA	7857562	7856684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7856984_7857199_7857382
transcript_56388.known	chr17	+	2783	19	FSM	ENSG00000170037.14	ENST00000565740.5	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_17	29.9281031477889	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	880	False	NA	17	True	AATAAA	-17	NA	7933079	7949578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949158_7949384
transcript_56389.known	chr17	+	3996	19	FSM	ENSG00000170037.14	ENST00000563694.6	3996	19	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	23.1879731491442	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTAAGTTATTGTATA	6	True	NA	NA	False	AAAACA	-43	NA	7932205	7949920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949084_7949158_7949384
transcript_56394.known	chr17	-	759	5	FSM	ENSG00000170043.12	ENST00000540486.5	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	449.887208086649	2563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	1080	False	NA	-3	True	AATAAA	-20	NA	7931999	7930344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730_7931830_7931939
transcript_56397.known	chr17	-	648	4	FSM	ENSG00000170043.12	ENST00000571739.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	555.721153097486	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTGAGCGTGTTGGTT	-13	True	NA	-6	True	AATAAA	-17	NA	7931962	7930347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7930735_7931010_7931150_7931730_7931830_7931939
transcript_56398.known	chr17	-	409	4	FSM	ENSG00000170043.12	ENST00000572656.2	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	466.776891744511	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCCACTGGGATCAAAGT	956	False	NA	NA	False	NA	NA	NA	7932123	7931094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7931150_7931505_7931577_7931730_7931830_7931939
transcript_56400.known	chr17	-	561	3	FSM	ENSG00000170043.12	ENST00000575639.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	616.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCAGAGCAACAGCCTA	28	True	NA	NA	False	NA	NA	NA	7931921	7930503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7930735_7931010_7931150_7931730
transcript_56403.known	chr17	-	812	4	FSM	ENSG00000170043.12	ENST00000303731.9	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_2	60.0721788073869	6751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGAGCGTGTTGGT	3	True	NA	-7	True	AATAAA	-16	NA	7931946	7930348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730
transcript_56404.known	chr17	+	3769	19	FSM	ENSG00000170037.14	ENST00000380262.7	3769	19	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_17	41.0859157027783	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	1492	False	NA	15	True	AATAAA	-15	NA	7932154	7949576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948686_7949084_7949158_7949384
transcript_56406.nic	chr17	+	552	3	ISM	ENSG00000132518.7	ENST00000254854.5	3680	20	13451	0	-63	0	3prime_fragment	FALSE	canonical	0	0	junction_2	1.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTGTGTGCTGCTT	9807	False	NA	4	True	AATAAA	-17	NA	8016065	8020342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_8016291_8016442_8016555_8020127
transcript_56407.known	chr17	+	2697	14	FSM	ENSG00000179593.16	ENST00000380183.9	2697	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	1.5268794800984	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCTGGTGGTATGTGG	0	True	NA	NA	False	AATAAA	-15	NA	8039058	8049134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8039303_8039385_8039606_8039901_8039984_8042368_8042492_8042780_8042885_8044828_8045002_8045237_8045385_8045482_8045687_8046667_8046755_8046906_8047077_8047257_8047380_8047563_8047665_8047744_8047916_8048385
transcript_56409.known	chr17	-	517	2	FSM	ENSG00000263427.1	ENST00000577807.1	517	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTATTAATCTTTAAAT	NA	False	NA	NA	False	AGTAAA	-17	NA	8057621	8056224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8056692_8057571
transcript_5641.known	chr1	+	1179	5	FSM	ENSG00000116221.15	ENST00000336230.10	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	720.481566384595	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTTTGGTATGAG	-15	True	NA	24	True	AATAAA	-20	NA	54200166	54218381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54200590_54209947_54210132_54212500_54212659_54216140_54216345_54218171
transcript_56412.nnic	chr17	+	564	2	NNC	ENSG00000214999.3	novel	1804	2	NA	NA	-149	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	NA	False	NA	4	True	AATAAA	-19	NA	8079332	8081565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_8079525_8081193
transcript_56413.known	chr17	+	1804	2	FSM	ENSG00000214999.3	ENST00000399413.3	1804	2	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	NA	False	NA	4	True	AATAAA	-19	NA	8079481	8081565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8079525_8079804
transcript_56414.nnic	chr17	+	480	2	NNC	ENSG00000214999.3	novel	1804	2	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	NA	False	NA	4	True	AATAAA	-19	NA	8079457	8081565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_8079525_8081152
transcript_56415.known	chr17	-	4676	23	FSM	ENSG00000179094.16	ENST00000317276.9	4676	23	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_22	12.1175373217416	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTTTGTGGAATGAAG	-8	True	NA	-4	True	GATAAA	-7	NA	8152404	8140471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8141341_8141804_8141956_8142268_8142459_8142648_8142836_8143265_8143877_8144750_8144994_8145957_8146138_8146371_8146503_8146593_8146766_8146896_8147003_8147249_8147382_8147469_8147579_8147673_8147828_8147996_8148104_8148180_8148260_8148643_8148787_8149258_8149311_8149461_8149664_8149754_8149877_8149970_8150126_8150218_8150318_8150431_8150846_8152336
transcript_56430.known	chr17	-	2126	5	FSM	ENSG00000220205.9	ENST00000316509.11	2126	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	43.412987688018	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTCTAAGATCTTTT	12	True	NA	-2	True	AATAAA	-18	NA	8162948	8159148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162877
transcript_56435.known	chr17	-	1210	2	FSM	ENSG00000179029.15	ENST00000449985.6	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCTTTGTTTTTTGTC	1	True	NA	-27	True	AATACA	-3	NA	8176373	8173236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8174273_8176199
transcript_56438.known	chr17	-	134	1	FSM	ENSG00000200463.1	ENST00000363593.1	134	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGACGATCACTTAC	-1	True	NA	NA	False	NA	NA	NA	8173587	8173453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8173500_8173600
transcript_56439.known	chr17	-	2358	3	FSM	ENSG00000179029.15	ENST00000532998.5	2358	3	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	2.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTTAAAAAAAT	1	True	NA	NA	False	NA	NA	NA	8176373	8173741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8175858_8175958_8176027_8176199
transcript_56440.known	chr17	-	756	5	FSM	ENSG00000179029.15	ENST00000316425.9	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	30.7032164438842	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGACTTATATACAGT	-25	True	NA	-13	True	AATAAA	-17	NA	8176399	8174000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8174273_8174519_8174617_8175756_8175876_8175958_8176027_8176199
transcript_56441.known	chr17	-	726	5	FSM	ENSG00000179029.15	ENST00000533070.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	35.7036412708844	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTATATACAGTTT	-14	True	NA	-11	True	AATAAA	-19	NA	8176388	8173998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8174273_8174540_8174617_8175756_8175876_8175958_8176027_8176199
transcript_56442.known	chr17	-	455	3	FSM	ENSG00000179029.15	ENST00000431792.2	455	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	41	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTAAGACTTATATACA	1	True	NA	-15	True	AATAAA	-15	NA	8176316	8174002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8174273_8175958_8176027_8176199
transcript_56445.nnic	chr17	-	1330	3	Genic_Genomic	ENSG00000271002.1	novel	315	1	NA	NA	-791	7848	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGCTATGTGTTGCAA	-4	True	NA	NA	False	AATAAA	-42	NA	8200228	8191274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr17_-_8192501_8199212_8199289_8200200
transcript_56453.known	chr17	-	1167	8	FSM	ENSG00000178999.13	ENST00000534871.5	1167	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_7	245.48228249796	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-3	True	NA	-16	True	AATAAA	-13	NA	8210581	8204742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210529
transcript_56467.known	chr17	-	1243	9	FSM	ENSG00000178999.13	ENST00000585124.6	1243	9	0	0	0	0	multi-exon	TRUE	canonical	3	539	junction_8	87.8335606417046	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	3	True	NA	-7	True	AATAAA	-22	NA	8210575	8204733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_56468.known	chr17	-	742	7	FSM	ENSG00000178999.13	ENST00000581511.5	742	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	261.557779892364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGGTGGCCTGGGAGGCC	-6	True	NA	NA	False	NA	NA	NA	8210584	8206490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210226_8210529
transcript_56469.known	chr17	+	5369	28	FSM	ENSG00000178921.14	ENST00000314666.11	5369	28	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	49.1575948944054	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTGCCTGGGGTCCAC	-6	True	NA	14	True	AATAAA	-18	NA	8249288	8270486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255501_8255692_8255804_8255911_8256266_8256408_8256523_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
transcript_56471.known	chr17	-	7039	23	FSM	ENSG00000178971.16	ENST00000651323.1	7039	23	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_4	16.5427695124032	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTCTTGGTTATTAA	-7	True	NA	-1	True	AATAAA	-22	NA	8248056	8224814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8228320_8228502_8228630_8228726_8228893_8229141_8229207_8229301_8229447_8229890_8229969_8230293_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360_8232476_8232905_8233033_8234454_8234656_8234748_8234927_8235052_8235286_8235830_8235960_8236057_8236343_8237374_8237520_8238030_8238243_8238391_8238630_8242984_8243149_8248003
transcript_56475.known	chr17	+	4242	26	FSM	ENSG00000178921.14	ENST00000580356.5	4242	26	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	104.328358560844	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGTGGCTGTGTCTA	-9	True	NA	NA	False	NA	NA	NA	8249285	8269430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255804_8255911_8256266_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
transcript_56476.known	chr17	+	674	1	FSM	ENSG00000269947.1	ENST00000602597.1	674	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCAATCAGTCTCCCTC	9161	False	NA	18	True	ATTAAA	-23	NA	8277762	8278436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8277800_8278400
transcript_56478.known	chr17	-	1940	5	FSM	ENSG00000125434.11	ENST00000577745.2	1940	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	2.54950975679639	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATTGTCTTATGTTTA	-33	True	NA	2	True	TATAAA	-17	NA	8295400	8290060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
transcript_5648.known	chr1	-	3339	7	FSM	ENSG00000215883.11	ENST00000421415.5	3339	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	12.7725834852973	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAACCTTATGTGGTGGT	5	True	NA	NA	False	NA	NA	NA	54200010	54172335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54195418_54195716_54196368_54196492_54199975
transcript_56484.known	chr17	+	831	5	FSM	ENSG00000108961.14	ENST00000226105.11	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_4	81.0030863609529	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATCTCTGTGCCTTTGA	-3	True	NA	NA	False	AATAAA	-17	NA	8288669	8290087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502_8289589_8289812
transcript_56485.known	chr17	-	354	2	FSM	ENSG00000125434.11	ENST00000581320.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGCGCCTGGCCTCCT	6332	False	NA	NA	False	NA	NA	NA	8289035	8288168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8288433_8288945
transcript_56486.known	chr17	+	1074	4	FSM	ENSG00000108961.14	ENST00000407006.8	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	33.4896335536171	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTGCCTTTGAATC	-19	True	NA	NA	False	AATAAA	-20	NA	8288653	8290090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502
transcript_56487.known	chr17	+	749	4	FSM	ENSG00000108961.14	ENST00000580434.5	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	218.037203757116	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	-2	True	NA	NA	False	AATAAA	-22	NA	8288670	8290092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289812
transcript_56488.known	chr17	+	1140	3	FSM	ENSG00000108961.14	ENST00000439238.3	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	30.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	5	True	NA	NA	False	AATAAA	-22	NA	8288677	8290092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8288866_8288955_8289073_8289257
transcript_5649.known	chr1	+	1483	7	FSM	ENSG00000116221.15	ENST00000360840.9	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	1539	junction_5	73.6176307385368	2318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTGGTATGAGGG	-15	True	NA	26	True	AATAAA	-22	NA	54200166	54218383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54218171
transcript_56494.nnic	chr17	-	472	2	Antisense	novelGene_ENSG00000198844.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTCTGATAACAATGGT	NA	False	NA	NA	False	AATAAA	-15	NA	8315687	8314303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_-_8314538_8315449
transcript_56496.known	chr17	+	548	2	FSM	ENSG00000266279.1	ENST00000585275.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTGCCCTAGTATTGGA	NA	False	NA	NA	False	AATAAA	-19	NA	8337696	8338758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8337909_8338422
transcript_56497.nnic	chr17	+	585	2	NNC	ENSG00000266279.1	novel	548	2	NA	NA	350	4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCTAGTATTGGAGTAT	NA	False	NA	NA	False	AATAAA	-23	NA	8338046	8338762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_8338292_8338422
transcript_56498.known	chr17	+	1180	3	FSM	ENSG00000184650.11	ENST00000328248.7	1180	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGGCTGTTGTTGAGGC	-2	True	NA	NA	False	AATAAA	-22	NA	8339839	8346046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8340506_8345342_8345478_8345667
transcript_5650.known	chr1	+	1582	7	FSM	ENSG00000116221.15	ENST00000605337.5	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	599.895824289518	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACATATATCGTACACA	14	True	NA	-5	True	AATAAA	-6	NA	54200195	54225464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54225124
transcript_5651.nnic	chr1	-	1159	4	NNC	ENSG00000162391.12	novel	1975	8	NA	NA	11519	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTATGTGAGTCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	54612006	54609180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_54609942_54610411_54610556_54611605_54611746_54611892
transcript_56511.known	chr17	-	2570	4	FSM	ENSG00000184619.8	ENST00000647210.1	2570	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTTATTCTTAGGGC	19	True	NA	NA	False	AAAAAG	-16	NA	8376667	8368979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8370387_8371308_8371495_8371599_8371809_8375899
transcript_56515.known	chr17	-	353	4	FSM	ENSG00000161970.15	ENST00000585176.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5393.81052689098	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGGCAAATACAAGGAAG	-1	True	NA	1	True	AAAAAG	-42	NA	8383192	8377609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8381997_8382091_8383156
transcript_56522.known	chr17	-	564	4	FSM	ENSG00000161970.15	ENST00000583011.6	564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6073.10669170968	25964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGTGTTTTGTGTGTG	NA	False	NA	88	True	AATAAA	-41	NA	8383213	8377522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382339_8383156
transcript_56524.known	chr17	-	3209	3	FSM	ENSG00000184619.8	ENST00000643221.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGACCATGCCACTGC	6533	False	NA	NA	False	NA	NA	NA	8376658	8368709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8370387_8371308_8372082_8375899
transcript_5653.known	chr1	+	2356	10	FSM	ENSG00000243725.7	ENST00000371281.4	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_2	26.1892448002969	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTAATTTGAGGCTGG	-4	True	NA	26	True	AGTAAA	-26	NA	54715860	54742657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54733628_54733711_54737581_54737665_54741410
transcript_56530.known	chr17	-	12370	2	FSM	ENSG00000184619.8	ENST00000396267.3	12370	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTATGTCGGCGACTT	-18	True	NA	NA	False	GATAAA	-1	NA	8376704	8358821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8370387_8375899
transcript_56531.known	chr17	-	528	4	FSM	ENSG00000161970.15	ENST00000648839.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_3	2137.3447701919	212946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGGTGATTT	-2	True	NA	95	True	ATTAAA	-20	NA	8383193	8377515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8383156
transcript_56532.known	chr17	-	763	4	FSM	ENSG00000161970.15	ENST00000582556.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_3	5772.25370967778	5940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTGATTAAAACTTGA	25	False	NA	62	True	AATAAA	-15	NA	8383166	8377548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382861
transcript_56533.known	chr17	-	603	4	FSM	ENSG00000161970.15	ENST00000584906.6	603	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	5393.81052689098	5817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTTTGTGTGTGGT	876	False	NA	90	True	AATAAA	-43	NA	8382315	8377520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8380586_8380704_8382142
transcript_56534.known	chr17	-	443	3	FSM	ENSG00000161970.15	ENST00000582485.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6977	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGATTAAAACTTGAAACAA	882	False	NA	67	True	AATAAA	-20	NA	8382309	8377543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377679_8379795_8379937_8382142
transcript_56535.known	chr17	-	456	2	FSM	ENSG00000161970.15	ENST00000578069.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	11442	junction_1	0	3548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGTGTTTTGTGT	3107	False	NA	85	True	AATAAA	-38	NA	8380084	8377525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795
transcript_56536.known	chr17	-	563	4	FSM	ENSG00000161970.15	ENST00000584343.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	5960.23178147368	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAAAACTGGACAAAGACC	182	False	NA	-68	True	NA	NA	NA	8383009	8377678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382774
transcript_5654.known	chr1	+	2124	10	FSM	ENSG00000243725.7	ENST00000371284.9	2124	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	84.9666601281546	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTAGCTGTGTGACTTC	3	True	NA	14	True	NA	NA	NA	54715867	54742307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54716144_54716598_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54733628_54733711_54737581_54737665_54741410
transcript_56542.nic	chr17	-	3147	22	ISM	ENSG00000133026.14	ENST00000269243.8	7662	41	-166	38256	-62	-6864	5prime_fragment	FALSE	canonical	3	835	junction_17	102.795351809999	316	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGCACATATTCAGGTA	-1	True	NA	NA	False	AAGAAA	-34	NA	8630927	8512467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_5655.known	chr1	-	2356	2	FSM	ENSG00000162396.6	ENST00000371279.4	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTGCACATTAATTT	-3	True	NA	-15	True	AATAAA	-16	NA	54764523	54756897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54759191_54764460
transcript_56551.nic	chr17	-	1474	9	ISM	ENSG00000133026.14	ENST00000687661.1	2213	14	-106	7747	-10	-1830	5prime_fragment	FALSE	canonical	3	835	junction_4	142.846727298878	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTGAGGCAATATTAAT	-4	True	NA	NA	False	AATAAA	-20	NA	8630875	8548455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_56556.nic	chr17	-	1049	6	ISM	ENSG00000133026.14	ENST00000411957.2	1984	7	-106	2696	-10	1949	5prime_fragment	FALSE	canonical	3	78	junction_1	442.140882525016	92	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGCTTAGAGCCTTAT	-4	True	NA	NA	False	ATTAAA	-19	NA	8630875	8576509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_56557.known	chr17	-	732	6	ISM	ENSG00000133026.14	ENST00000692526.1	7809	43	90	103091	4	1153	5prime_fragment	FALSE	canonical	3	124	junction_5	529.866171783027	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGTTATTCAGTACC	8	True	NA	NA	False	NA	NA	NA	8630717	8577305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8623423_8623498_8630653
transcript_56558.nic	chr17	-	816	5	ISM	ENSG00000133026.14	ENST00000411957.2	1984	7	-106	3492	-10	1153	5prime_fragment	FALSE	canonical	3	1043	junction_4	89.0965066655253	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGTTATTCAGTACC	-4	True	NA	NA	False	NA	NA	NA	8630875	8577305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_56562.nic	chr17	-	1186	3	ISM	ENSG00000133026.14	ENST00000411957.2	1984	7	-106	30581	-10	-25936	5prime_fragment	FALSE	canonical	3	1043	junction_2	117.5	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAAGTTGGTTGATTT	-4	True	NA	NA	False	AATAAA	-13	NA	8630875	8604394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8604983_8622901_8623278_8630653
transcript_56571.nic	chr17	+	1411	9	NIC	ENSG00000166579.16	novel	2352	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	96.9162009160491	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTCTTTCTTAAAAAA	-1	True	NA	NA	False	ATTAAA	-35	NA	8435838	8461384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8461136
transcript_56572.known	chr17	+	2352	9	FSM	ENSG00000166579.16	ENST00000334527.12	2352	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_8	33.8922926341668	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTTGCTTTATTCAGT	-36	True	NA	23	True	AATAAA	-19	NA	8435883	8468163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
transcript_56581.known	chr17	+	2181	8	FSM	ENSG00000166579.16	ENST00000380025.8	2181	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	103.225728480879	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGACGTTGCTTTATTC	-20	True	NA	20	True	AATAAA	-16	NA	8435899	8468160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8466929
transcript_56584.known	chr17	-	2256	1	FSM	ENSG00000185156.6	ENST00000329805.6	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTATAGTCACTATATG	-4	True	NA	-2	True	AATACA	-19	NA	8799365	8797109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8797100_8799400
transcript_5659.known	chr1	-	4233	9	FSM	ENSG00000116133.13	ENST00000371269.9	4233	9	0	0	0	0	multi-exon	FALSE	canonical	3	2242	junction_1	204.988261859064	2654	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCGTTTCTTGCTTGG	-13	True	NA	-1	True	AATAAA	-19	NA	54887195	54849626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_56590.nnic	chr17	+	399	3	Antisense	novelGene_ENSG00000141506.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCTGATCACTCTGTTTA	NA	False	NA	7	True	ATTAAA	-18	NA	8886164	8891954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_8886318_8887621_8887701_8891787
transcript_56592.known	chr17	-	4491	19	FSM	ENSG00000141506.15	ENST00000447110.6	4491	19	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	30.6560468729506	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATGACCAGTAGTTACT	1	True	NA	-12	True	AATAAA	-18	NA	8965707	8878915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8880787_8880904_8881018_8881629_8881713_8881787_8881882_8884706_8884784_8886228_8886323_8886476_8886606_8887095_8887222_8887520_8887684_8888170_8888892_8889138_8889223_8889972_8890127_8890737_8890913_8893585_8893656_8904776_8904916_8905668_8905738_8909073_8909175_8911391_8911508_8965595
transcript_56593.known	chr17	+	402	2	FSM	ENSG00000266389.1	ENST00000585297.1	402	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCTTTGAGAGATATGAA	31	False	NA	NA	False	NA	NA	NA	8965895	8967070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8965994_8966766
transcript_56595.nnic	chr17	+	1770	2	FSM	ENSG00000265975.1_ENSG00000266389.1	ENST00000585297.1	402	2	-21	-1347	-21	1347	multi-exon	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCTCCTGCCTTCCCT	10	True	NA	10	True	AATAAA	-20	NA	8965874	8968417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8965994_8966766
transcript_56598.known	chr17	-	731	7	FSM	ENSG00000170310.15	ENST00000574431.5	731	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	221.037515669475	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCAAAGCTCTGACCTC	0	True	NA	-17	True	AATAAA	-2	NA	9575837	9250486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9575791
transcript_5660.known	chr1	+	403	2	FSM	ENSG00000233203.6	ENST00000433690.1	403	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTTATTTACT	916	False	NA	NA	False	AGTAAA	-19	NA	54887731	54888850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54887784_54888499
transcript_56605.known	chr17	-	830	8	FSM	ENSG00000170310.15	ENST00000306357.9	830	8	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_7	70.7504957796143	2576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	17	True	NA	-1	True	AATAAA	-18	NA	9575820	9250470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9568370_9568471_9575791
transcript_56606.known	chr17	-	638	6	FSM	ENSG00000170310.15	ENST00000575858.5	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	207.526962103723	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTGCATTGCTTCA	2	True	NA	-2	True	AATAAA	-17	NA	9575835	9250471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9568370_9568471_9575791
transcript_56607.known	chr17	-	367	3	FSM	ENSG00000170310.15	ENST00000570583.5	367	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	337.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTCTTGTGCATTGCTT	NA	False	NA	-4	True	AATAAA	-15	NA	9437889	9250473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9437796
transcript_56608.known	chr17	-	454	5	FSM	ENSG00000170310.15	ENST00000575294.6	454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	251.962670846298	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGCTCTCAATAAAT	26	True	NA	-37	True	NA	NA	NA	9575811	9250506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9568370_9568471_9575791
transcript_56610.known	chr17	+	711	4	FSM	ENSG00000166596.15	ENST00000576499.1	711	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTCACTATAGTTATT	11	True	NA	NA	False	ATTAAA	-18	NA	9576681	9594486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_9576766_9585772_9585973_9586701_9586835_9594192
transcript_56611.known	chr17	+	471	1	FSM	ENSG00000242692.1	ENST00000475545.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTATGAGTTAATAAAAGA	43	False	NA	NA	False	NA	NA	NA	10258761	10259232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10258800_10259200
transcript_56612.known	chr17	-	6044	40	FSM	ENSG00000125414.19	ENST00000245503.10	6044	40	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_39	8.82066189498355	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTAGACTGGTCTTGTCT	-1	True	NA	-2	True	AATAAA	-25	NA	10549658	10521147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10521433_10523089_10523186_10523307_10523413_10523495_10523667_10523758_10523885_10524465_10524670_10524756_10525066_10525223_10525349_10525450_10525617_10525692_10525877_10526598_10526796_10526937_10527057_10527747_10527875_10528689_10529080_10529161_10529253_10529335_10529482_10529563_10529741_10529831_10530075_10531632_10531889_10533284_10533422_10533508_10533633_10535072_10535191_10535277_10535366_10536529_10536607_10537232_10537543_10537664_10537836_10539204_10539355_10539443_10539563_10539927_10540067_10540593_10540698_10542874_10542974_10543097_10543162_10543710_10543804_10543901_10544017_10544099_10544128_10545345_10545503_10547474_10547619_10547716_10547941_10549374_10549418_10549635
transcript_56617.known	chr17	-	2813	6	FSM	ENSG00000187824.9	ENST00000341871.8	2813	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	4.3081318457076	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATCTTTTTTTTTTTT	-18	True	NA	NA	False	ATTAAA	-17	NA	10730023	10713294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729030_10729061_10729779
transcript_56622.known	chr17	-	1402	5	FSM	ENSG00000187824.9	ENST00000455996.6	1402	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	9.28372231381357	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGT	-18	True	NA	NA	False	NA	NA	NA	10730023	10714675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729779
transcript_56624.known	chr17	+	1534	4	FSM	ENSG00000170222.12	ENST00000379774.5	1534	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.32049379893857	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTATACTTGGATTTTT	-24	True	NA	NA	False	NA	NA	NA	10697593	10711558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10697668_10704909_10705528_10706437_10706555_10710833
transcript_56625.known	chr17	+	1277	4	FSM	ENSG00000170222.12	ENST00000468843.1	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	6.64997911442	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGCTTGCATAACAAAAT	-4	True	NA	12	True	AATAAA	-25	NA	10697613	10711233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10697668_10704909_10705616_10706437_10706555_10710833
transcript_56631.known	chr17	+	575	4	FSM	ENSG00000263400.8	ENST00000579114.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTATACCCAGGTGGTA	16	True	NA	NA	False	NA	NA	NA	10729803	10768030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10729901_10754228_10754363_10766678_10766857_10767864
transcript_56634.known	chr17	+	562	3	FSM	ENSG00000263400.8	ENST00000581366.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGACACGAGCAACTAAT	-11	True	NA	NA	False	NA	NA	NA	10729776	10767006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10729877_10754228_10754363_10766678
transcript_5664.nnic	chr1	+	919	3	NNC	ENSG00000143001.5	novel	1256	3	NA	NA	-75	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	2.5	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGACTCTATGAGTTG	NA	False	NA	5	True	AATAAA	-16	NA	54980552	54992288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_54980669_54986096_54986447_54991835
transcript_56643.known	chr17	-	429	1	FSM	ENSG00000264176.1	ENST00000584384.1	429	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGCAGTATATTTTTATA	NA	False	NA	NA	False	NA	NA	NA	10716430	10716001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10716000_10716400
transcript_56644.known	chr17	-	9577	6	FSM	ENSG00000133028.12	ENST00000255390.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	42.1881499949927	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTTTTTTTTGTA	-6	True	NA	NA	False	AATAAA	-17	NA	10697533	10672473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
transcript_56645.known	chr17	-	1601	6	FSM	ENSG00000133028.12	ENST00000577427.1	1601	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	136.551235805466	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTTTGCTGTTCAGAC	-3	True	NA	-20	True	AGTAAA	-5	NA	10697530	10680353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692856_10692962_10695740_10695832_10697234
transcript_56646.known	chr17	+	1138	3	FSM	ENSG00000170222.12	ENST00000609540.1	1138	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGCTTGCATAACAA	7282	False	NA	9	True	AATAAA	-22	NA	10704899	10711230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10705528_10706437_10706551_10710833
transcript_56649.known	chr17	+	1024	4	FSM	ENSG00000263508.6	ENST00000645807.1	1024	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATATGTCTATGTCAT	NA	False	NA	NA	False	AATAAA	-35	NA	10844673	10880895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10844965_10847891_10848046_10878369_10878525_10880471
transcript_5665.known	chr1	+	3637	12	FSM	ENSG00000169174.11	ENST00000302118.5	3637	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	19.2684386308992	714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATAGACTTGACTG	5	True	NA	19	True	AATAAA	-22	NA	55039547	55064852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_55040045_55043842_55044035_55046522_55046647_55052277_55052412_55052649_55052792_55055992_55056190_55057330_55057515_55058035_55058210_55058498_55058648_55059485_55059664_55061374_55061557_55063368
transcript_56652.known	chr17	-	2261	7	FSM	ENSG00000154957.14	ENST00000454073.7	2261	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	27.4043792120894	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTATCTTATTTGTTT	0	True	NA	-14	True	AATAAA	-13	NA	11997457	11977451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_56653.known	chr17	-	2295	7	FSM	ENSG00000154957.14	ENST00000580306.7	2295	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	25.0399680510978	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	-18	True	NA	-1	True	AATAAA	-26	NA	11997475	11977438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_56655.nnic	chr17	+	1617	3	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	46	junction_2	4.5	148	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGTTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	11971995	11976909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_11972336_11973569_11974438_11976500
transcript_56659.nnic	chr17	+	842	2	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	560	junction_1	0	1043	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGTTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	11971902	11976909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_11972336_11976500
transcript_56661.known	chr17	-	802	1	FSM	ENSG00000280168.1	ENST00000623460.1	802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAGAAAGAAACTGGTA	NA	False	NA	NA	False	AAGAAA	-8	NA	12973834	12973032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_12973000_12973800
transcript_56662.nic	chr17	-	2789	24	NIC	ENSG00000006744.19	novel	3767	24	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_23	173.38921109896	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGAGTTCTTTTGCTTCC	305	False	NA	-9	True	AATAAA	-15	NA	13017692	12992390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017566
transcript_56678.known	chr17	-	2291	3	FSM	ENSG00000236088.11	ENST00000660804.1	2291	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCTGAAATATACTTTAT	-22	True	NA	NA	False	NA	NA	NA	14069483	14028901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_14030572_14034007_14034417_14069271
transcript_5668.known	chr1	+	569	4	FSM	ENSG00000223956.4	ENST00000669154.1	569	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.49443825784929	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAGTTAGGTTCG	5	True	NA	4	True	AATAAA	-18	NA	56414945	56415962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_56415151_56415247_56415354_56415532_56415610_56415781
transcript_56680.known	chr17	-	5962	2	FSM	ENSG00000236088.11	ENST00000661551.1	5962	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTAGGGCATAATAATTT	-31	True	NA	NA	False	AATATA	-10	NA	14069492	14028675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_14034417_14069271
transcript_56682.known	chr17	+	4948	14	FSM	ENSG00000006695.12	ENST00000664217.1	4948	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	117.859659800476	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTAAGTAAAACCATC	NA	False	NA	NA	False	AAAAAG	-41	NA	14069489	14231736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809_14207269_14208553_14208780_14209508_14209966_14210467_14210566_14211287_14211509_14215809_14215938_14216684_14217666_14230402
transcript_56684.known	chr17	+	2898	7	FSM	ENSG00000006695.12	ENST00000261643.8	2898	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	45.6240677225908	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	-15	True	NA	14	True	AATAAA	-15	NA	14069503	14208677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809
transcript_56686.nnic	chr17	+	1090	6	NNC	ENSG00000006695.12	novel	2898	7	NA	NA	3	-25205	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_5	105.808506274307	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTGTGTATGTGAAAC	-20	True	NA	NA	False	AATAAA	-43	NA	14069498	14182308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14182020
transcript_56687.known	chr17	+	1509	6	FSM	ENSG00000006695.12	ENST00000581931.5	1509	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	100.276417965542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATACACAGCTTCCTCT	85	False	NA	NA	False	NA	NA	NA	14069603	14207513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14159876_14159948_14191988_14192222_14206809
transcript_56688.known	chr17	+	875	3	FSM	ENSG00000006695.12	ENST00000429152.6	875	3	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	10.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCTTTAGTGTTT	-23	True	NA	NA	False	ATTAAA	-22	NA	14069495	14077322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_14069649_14074322_14074457_14076734
transcript_56689.known	chr17	-	779	3	FSM	ENSG00000223510.7	ENST00000420162.7	779	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTTTGAACTCCCTAA	-1	False	NA	NA	False	AATAAA	-21	NA	14236862	14235672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_14236012_14236281_14236431_14236571
transcript_56690.known	chr17	-	459	1	FSM	ENSG00000230897.1	ENST00000412454.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	569	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTTTGTT	41	False	NA	NA	False	AAGAAA	-4	NA	14705534	14705075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_14705100_14705500
transcript_56691.known	chr17	-	1740	9	FSM	ENSG00000125409.13	ENST00000395930.6	1740	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGTCTCGGAAAGCCT	2	True	NA	NA	False	ATTAAA	-27	NA	15341597	15303811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15304153_15308663_15308819_15312258_15312482_15314086_15314231_15319076_15319148_15327991_15328076_15331006_15331615_15340027_15340062_15341517
transcript_56694.known	chr17	-	2423	5	FSM	ENSG00000109099.16	ENST00000674673.1	2423	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	3.8405728739343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGAGTTTTTGTGGGA	9102	False	NA	6	True	AATAAA	-22	NA	15263190	15229772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260762_15262428
transcript_56695.known	chr17	-	2047	5	FSM	ENSG00000109099.16	ENST00000675808.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.16441400296898	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCACTGGTCTCTCTTG	9687	False	NA	-7	True	AATAAA	-9	NA	15262605	15229785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260984_15262428
transcript_56696.known	chr17	-	2833	7	FSM	ENSG00000259024.6	ENST00000522212.6	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	103.660369583666	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	61	False	NA	-18	True	AATAAA	-15	NA	15563561	15436020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_5670.known	chr1	+	633	4	FSM	ENSG00000223956.4	ENST00000662108.1	633	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTAGGTTCGCTAT	20	False	NA	8	True	AATAAA	-22	NA	56414960	56415966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_56415151_56415247_56415343_56415532_56415696_56415781
transcript_56700.known	chr17	-	1527	6	FSM	ENSG00000175106.17	ENST00000225576.7	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	94.3152161636711	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGCCTTCGTAATGAAA	78	False	NA	NA	False	ATTAAA	-19	NA	15563544	15502263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_56702.nnic	chr17	-	1900	6	NNC	ENSG00000175106.17	novel	1527	6	NA	NA	-15	6413	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	116.926643670294	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGTTTGTAATTCTT	12	False	NA	NA	False	ATTAAA	-39	NA	15563610	15530566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_15531843_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_56706.known	chr17	-	2989	7	FSM	ENSG00000175106.17	ENST00000584811.5	2989	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	130.03001790185	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	194	False	NA	NA	False	TATAAA	-21	NA	15563428	15536979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15538154_15540432_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15562192
transcript_56708.known	chr17	-	3358	12	FSM	ENSG00000221926.13	ENST00000649191.2	3358	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	17.6227688934252	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-6	True	NA	-13	True	AATAAA	-16	NA	15684311	15627965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15651090_15651947_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_56709.nic	chr17	-	2599	12	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-22	0	intron_retention	FALSE	canonical	2	6	junction_5	16.9086021434736	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	NA	False	NA	-13	True	AATAAA	-16	NA	15684333	15627965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15658801_15658877_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_5671.known	chr1	-	3273	6	FSM	ENSG00000162407.9	ENST00000371250.4	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_5	8.97552226892675	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGACTTGCAAGCCTGG	-1	True	NA	-15	True	AATAAA	-19	NA	56579563	56494760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_56496677_56511975_56512153_56523822_56523881_56524276_56524555_56536954_56537113_56578877
transcript_56722.nic	chr17	-	1436	6	ISM	ENSG00000221926.13	ENST00000460728.5	793	8	-50	40217	-22	736	5prime_fragment	FALSE	canonical	3	27	junction_1	8.25590697622012	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAATTCTCA	NA	False	NA	NA	False	AAGAAA	-9	NA	15684333	15676438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_5673.known	chr1	-	141	1	FSM	ENSG00000225475.1	ENST00000442812.1	141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	56619549	56619408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_56619400_56619500
transcript_56730.nic	chr17	+	772	5	ISM	ENSG00000187607.16	ENST00000585194.5	607	6	-33	7620	-7	0	5prime_fragment	FALSE	canonical	3	33	junction_1	74.0709119695444	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	NA	False	NA	10	True	AATAAA	-22	NA	15699711	15708424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154
transcript_56733.known	chr17	+	582	3	FSM	ENSG00000187607.16	ENST00000585207.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	86	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGATGTGGAGTTTC	NA	False	NA	NA	False	NA	NA	NA	15699576	15701300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15699778_15700134_15700367_15701151
transcript_56734.known	chr17	+	427	3	FSM	ENSG00000187607.16	ENST00000481540.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	1080	False	NA	10	True	AATAAA	-22	NA	15701198	15708424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15701241_15706386_15706502_15708154
transcript_56735.known	chr17	+	690	1	FSM	ENSG00000276855.1	ENST00000612568.1	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTGTCTAAAAGTGG	2833	False	NA	21	True	AATAAA	-24	NA	15789015	15789705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15789000_15789700
transcript_5674.known	chr1	+	9355	9	FSM	ENSG00000162409.12	ENST00000371244.9	9355	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	8.67107259801231	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTCTGCTCCATCA	-31	True	NA	15	True	ATTAAA	-25	NA	56645313	56715335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_56645482_56674380_56674523_56691393_56691488_56692357_56692503_56693764_56693853_56695934_56696160_56703970_56704476_56706091_56706219_56707474
transcript_56750.known	chr17	-	1264	8	FSM	ENSG00000214941.8	ENST00000490395.5	1264	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	238.555431456823	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	11	True	NA	-4	True	GATAAA	-32	NA	15999650	15976559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_56751.known	chr17	-	969	6	FSM	ENSG00000214941.8	ENST00000476496.5	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	251.610333651064	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	882	False	NA	-4	True	GATAAA	-32	NA	15999588	15976559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_56752.known	chr17	-	558	6	FSM	ENSG00000214941.8	ENST00000495825.6	558	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	215.967034521475	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-22	True	NA	-4	True	AATAAA	-25	NA	15999683	15977729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_56753.known	chr17	-	987	8	FSM	ENSG00000214941.8	ENST00000585208.5	987	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	205.395387743061	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTAGTCTTTTTTT	836	False	NA	-7	True	AATAAA	-22	NA	15999634	15977732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15986799_15986887_15987265_15987369_15990864_15991105_15993756_15993779_15999505
transcript_56754.known	chr17	-	671	6	FSM	ENSG00000214941.8	ENST00000474716.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_5	173.606912304781	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	22	True	NA	-1	True	AATAAA	-28	NA	15999639	15977726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_56755.known	chr17	-	918	6	FSM	ENSG00000214941.8	ENST00000486706.6	918	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	240.875569537469	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTAGTCTTTTTTT	-8	True	NA	-7	True	AATAAA	-22	NA	15999669	15977732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
transcript_56756.known	chr17	-	677	5	FSM	ENSG00000214941.8	ENST00000584519.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	237.369437796865	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGCTGGGGTGCAGTG	834	False	NA	43	True	NA	NA	NA	15999636	15977682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15999518
transcript_56757.known	chr17	-	1877	16	FSM	ENSG00000141027.22	ENST00000582357.5	1877	16	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	80.1444251890853	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATGAAAAAGAAGAC	8	True	NA	-25	True	AAAAAG	-25	NA	16215529	16126106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_56759.known	chr17	-	1883	15	FSM	ENSG00000141027.22	ENST00000411510.5	1883	15	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	68.6424111773829	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTAAATAATTAGTTA	0	True	NA	0	True	AAAAAG	-20	NA	16215537	16126081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16126210_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16215361
transcript_56766.nic	chr17	+	2278	9	ISM	ENSG00000011295.16	ENST00000261647.10	3050	10	239	618	229	0	3prime_fragment	FALSE	canonical	3	513	junction_6	39.3636888515291	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	240	False	NA	33	True	AATAAA	-19	NA	16000062	16028786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_56769.known	chr17	+	3050	10	FSM	ENSG00000011295.16	ENST00000261647.10	3050	10	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	69.9048736357108	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGTCACTGGAGTTTTC	1	True	NA	10	True	ATTAAA	-15	NA	15999823	16029404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16000033_16000117_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_56772.nnic	chr17	+	1285	8	NNC	ENSG00000108474.17	novel	1289	7	NA	NA	-16	-157	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	39.816927996796	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACAGATGTGACTTTTA	NA	False	NA	15	True	CATAAA	-26	NA	16217174	16326254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_16217462_16233970_16234071_16284020_16284139_16299887_16299979_16313546_16313615_16316680_16316713_16317774_16317909_16325799
transcript_56780.known	chr17	+	1289	7	FSM	ENSG00000108474.17	ENST00000225609.10	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	17.4419672692682	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	-6	True	NA	NA	False	NA	NA	NA	16217209	16326411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16316713_16317774_16317909_16325799
transcript_56786.nic	chr17	+	2229	6	NIC	ENSG00000108474.17	novel	1289	7	NA	NA	-16	-157	intron_retention	FALSE	canonical	3	66	junction_2	18.5105375394665	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCACAGATGTGACTTTTA	NA	False	NA	15	True	CATAAA	-26	NA	16217174	16326254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16317909_16325799
transcript_56787.known	chr17	+	1257	6	FSM	ENSG00000108474.17	ENST00000395844.8	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	36.8423669163641	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	-6	True	NA	NA	False	NA	NA	NA	16217209	16326411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16317774_16317909_16325799
transcript_56789.nnic	chr17	+	807	5	NNC	ENSG00000108474.17	novel	946	5	NA	NA	-16	-2661	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	37.1508748214628	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGTGACATAGAGT	NA	False	NA	NA	False	AATAAA	-20	NA	16217174	16314172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16313911
transcript_56796.known	chr17	+	888	2	FSM	ENSG00000108474.17	ENST00000463810.2	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCCATTTGTTTG	30	False	NA	14	True	AATAAA	-25	NA	16217245	16218219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16217462_16217547
transcript_56797.known	chr17	+	395	2	FSM	ENSG00000108474.17	ENST00000489009.1	395	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTAATGTGAGTGGC	21	False	NA	NA	False	AATAAA	-29	NA	16217236	16234140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16217462_16233970
transcript_56799.nnic	chr17	-	1423	6	NNC	ENSG00000166582.11	novel	1132	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	1015.07201714952	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	0	True	NA	-20	True	AATAAA	-17	NA	16353450	16342536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_16342942_16344596_16344712_16348615_16348686_16349023_16349334_16349930_16350030_16353026
transcript_568.known	chr1	+	712	3	FSM	ENSG00000243485.5	ENST00000473358.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAAGTCGCCCAGTG	NA	False	NA	NA	False	GATAAA	-6	NA	29553	31097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_30040_30563_30668_30975
transcript_56800.nic	chr17	-	1307	6	NIC	ENSG00000166582.11	novel	1132	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	1000.3282261338	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	0	True	NA	-20	True	AATAAA	-17	NA	16353450	16342536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_16342942_16344596_16344712_16348615_16348686_16349139_16349334_16349930_16350030_16353026
transcript_56803.known	chr17	-	1132	5	FSM	ENSG00000166582.11	ENST00000299736.5	1132	5	0	0	0	0	multi-exon	FALSE	canonical	3	1808	junction_3	237.799679352181	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-19	True	NA	-20	True	AATAAA	-17	NA	16353469	16342536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
transcript_56804.known	chr17	-	1770	5	FSM	ENSG00000166582.11	ENST00000476243.5	1770	5	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_3	778.611705216406	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	-6	True	NA	-17	True	AATAAA	-20	NA	16353456	16342533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16342942_16344596_16344712_16348615_16349334_16349930_16350030_16353026
transcript_56808.nic	chr17	-	1554	3	FSM	ENSG00000166582.11	ENST00000631687.2	1593	3	39	0	39	0	multi-exon	FALSE	canonical	3	558	junction_1	907	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACCACTGTTAATATTT	265	False	NA	-17	True	AATAAA	-25	NA	16353185	16348037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16349334_16349930_16350030_16353026
transcript_56809.known	chr17	-	671	1	NIC	ENSG00000166582.11	novel	1770	5	NA	NA	1248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACCACTGTTAATATTT	4742	False	NA	-17	True	AATAAA	-25	NA	16348708	16348037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_16348000_16348700
transcript_56810.known	chr17	-	554	2	FSM	ENSG00000166582.11	ENST00000472570.2	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	2327	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	8708	False	NA	-17	True	AATAAA	-20	NA	16344742	16342533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16342942_16344596
transcript_56819.known	chr17	+	376	2	FSM	ENSG00000170315.14	ENST00000577958.1	376	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAGGCAAGCAGCTGG	-14	True	NA	NA	False	NA	NA	NA	16380797	16382038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381037_16381901
transcript_56821.known	chr17	+	477	2	FSM	ENSG00000170315.14	ENST00000578649.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTTTGTCATGAAA	1	True	NA	29	True	AATAAA	-23	NA	16381094	16382745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381185_16382358
transcript_56822.known	chr17	+	1014	2	FSM	ENSG00000170315.14	ENST00000395837.1	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	0	3762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	6	True	NA	24	True	AATAAA	-18	NA	16381340	16382740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381516_16381901
transcript_56823.known	chr17	+	933	2	FSM	ENSG00000170315.14	ENST00000302182.8	933	2	0	0	0	0	multi-exon	FALSE	canonical	3	6628	junction_1	0	58283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	-3	True	NA	24	True	AATAAA	-18	NA	16381090	16382740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381185_16381901
transcript_56824.known	chr17	+	1012	2	FSM	ENSG00000170315.14	ENST00000395839.5	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	0	6409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	196	False	NA	24	True	AATAAA	-18	NA	16381289	16382740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381463_16381901
transcript_56825.known	chr17	+	704	3	FSM	ENSG00000170315.14	ENST00000535788.1	704	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3314	2767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATACTTGGTGTTTTGTC	-3	True	NA	23	True	AATAAA	-17	NA	16381090	16382739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381185_16381901_16382131_16382358
transcript_56826.known	chr17	+	1056	2	FSM	ENSG00000170315.14	ENST00000614404.1	1056	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	3342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTTTGTCATG	0	True	NA	26	True	AATAAA	-20	NA	16381464	16382742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381680_16381901
transcript_56828.nnic	chr17	+	1322	2	Genic_Genomic	ENSG00000265095.1	novel	449	1	NA	NA	-4090	626	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATCTACTGATTAATG	4750	False	NA	NA	False	NA	NA	NA	16387343	16392508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr17_+_16387434_16391276
transcript_56829.known	chr17	+	2779	15	FSM	ENSG00000187688.15	ENST00000338560.12	2779	15	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	1.11574995370095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	7	True	NA	25	True	AATATA	-17	NA	16415570	16437003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16415834_16417561_16417869_16420114_16420249_16422598_16422890_16423468_16423768_16426098_16426270_16426721_16426878_16427448_16427548_16428316_16428388_16428816_16428983_16431783_16431851_16431965_16432301_16433573_16433699_16434889_16434970_16436788
transcript_56831.known	chr17	+	483	2	FSM	ENSG00000187688.15	ENST00000493434.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	4516	False	NA	25	True	AATATA	-17	NA	16434701	16437003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16434970_16436788
transcript_56834.known	chr17	+	1043	6	FSM	ENSG00000175061.19	ENST00000487066.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	1475.02257609841	2563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	8789	False	NA	-26	True	AATAAA	-20	NA	16438974	16442018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439030_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441367
transcript_56840.known	chr17	+	904	5	FSM	ENSG00000175061.19	ENST00000663781.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	1371.4202492307	7036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	12	False	NA	-16	True	AATAAA	-30	NA	16439000	16442028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439030_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_56848.known	chr17	+	793	4	FSM	ENSG00000175061.19	ENST00000658116.2	801	4	1	7	0	-5	multi-exon	FALSE	canonical	3	20	junction_1	1570.24867103554	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCAATTCTTGAAAATGT	1	True	NA	-33	True	AATAAA	-13	NA	16439037	16442011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16440184_16440254_16441073_16441131_16441367
transcript_56857.known	chr17	+	1165	4	FSM	ENSG00000175061.19	ENST00000655540.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	70.7153920067383	7494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16440184_16440254_16441073_16441131_16441367
transcript_56858.known	chr17	+	1201	5	FSM	ENSG00000175061.19	ENST00000475953.6	1209	5	8	0	7	0	multi-exon	FALSE	canonical	3	198	junction_1	1446.31037039081	2154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	8	False	NA	-16	True	AATAAA	-30	NA	16439044	16442028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_56859.known	chr17	+	1057	3	FSM	ENSG00000175061.19	ENST00000470491.7	1108	3	22	29	3	-3	multi-exon	FALSE	canonical	3	428	junction_2	1386.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTCTTGGGTGTCAAT	22	False	NA	42	True	AATAAA	-1	NA	16439058	16441999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16440184_16440254_16441367
transcript_56860.known	chr17	+	1061	6	FSM	ENSG00000175061.19	ENST00000662869.1	1061	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1366.90037676489	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439531_16439704_16440184_16440254_16441073_16441131_16441367
transcript_56861.known	chr17	+	879	5	FSM	ENSG00000175061.19	ENST00000582911.6	885	5	0	6	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	1371.05898851946	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATTCTTGAAAATGTG	31	False	NA	-32	True	AATAAA	-14	NA	16439019	16442012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439394_16440184_16440254_16441073_16441131_16441367
transcript_56862.known	chr17	+	993	6	FSM	ENSG00000175061.19	ENST00000481898.6	997	6	0	4	0	0	multi-exon	FALSE	canonical	3	198	junction_2	1310.53766065688	2840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	-2	True	NA	-16	True	AATAAA	-30	NA	16438986	16442028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_56863.known	chr17	+	1159	4	FSM	ENSG00000175061.19	ENST00000491009.6	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	397.256424323971	1869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	15	False	NA	-26	True	AATAAA	-20	NA	16439003	16442018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073
transcript_56864.known	chr17	+	1300	5	FSM	ENSG00000175061.19	ENST00000653954.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_2	1165.75219815362	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTGAAAATGTGTATT	0	True	NA	-28	True	AATAAA	-18	NA	16439036	16442016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441073
transcript_56865.known	chr17	+	897	4	FSM	ENSG00000175061.19	ENST00000580180.6	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	1170.31970940518	2452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	8796	False	NA	-16	True	AATAAA	-30	NA	16438981	16442028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441367
transcript_56866.known	chr17	+	1035	5	FSM	ENSG00000175061.19	ENST00000654778.1	1035	5	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_4	814.961770575774	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	21	False	NA	-26	True	AATAAA	-20	NA	16439009	16442018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441367
transcript_56867.known	chr17	+	1685	4	FSM	ENSG00000175061.19	ENST00000497774.6	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	2444	junction_1	427.564679967319	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	22	False	NA	-26	True	AATAAA	-20	NA	16439010	16442018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16440254_16441073_16441131_16441367
transcript_56868.known	chr17	+	1149	6	FSM	ENSG00000175061.19	ENST00000484836.2	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1407.83612682727	2072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440110_16440254_16441073_16441131_16441367
transcript_56869.known	chr17	+	876	5	FSM	ENSG00000175061.19	ENST00000666215.2	879	5	3	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	880.255751188256	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441367
transcript_56870.known	chr17	+	973	5	FSM	ENSG00000175061.19	ENST00000477249.7	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1369.39137940912	2069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	0	True	NA	-16	True	AATAAA	-30	NA	16439036	16442028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16440110_16440254_16441073_16441131_16441367
transcript_56871.known	chr17	+	960	5	FSM	ENSG00000175061.19	ENST00000483140.7	965	5	0	5	0	5	multi-exon	FALSE	canonical	3	209	junction_2	877.879405157679	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTATTTGAAGAA	0	True	NA	-21	True	AATAAA	-25	NA	16439036	16442023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441367
transcript_56872.known	chr17	+	1178	5	FSM	ENSG00000175061.19	ENST00000480811.6	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_2	1051.04552113598	2328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	0	True	NA	-26	True	AATAAA	-20	NA	16439036	16442018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439704_16440184_16440254_16441073_16441131_16441367
transcript_56873.known	chr17	+	794	6	FSM	ENSG00000175061.19	ENST00000472367.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	330.790810029541	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGAGGGCCTGGGTGT	8	True	NA	16	True	AAAAAG	-15	NA	16439326	16463986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16439527_16439704_16440184_16440254_16462832_16462942_16463163_16463248_16463718
transcript_56874.known	chr17	+	564	3	FSM	ENSG00000175061.19	ENST00000584141.5	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_1	75.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAAAACTCGCTTCA	0	True	NA	-88	True	AATAAA	-8	NA	16439036	16441190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16440184_16440254_16441073
transcript_56875.known	chr17	+	1016	5	FSM	ENSG00000175061.19	ENST00000481027.5	1016	5	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	1346.68618746165	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACAATAAAGGATGGTC	2	True	NA	30	True	NA	NA	NA	16439320	16441987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16439527_16439704_16440184_16440254_16441073_16441131_16441367
transcript_56876.known	chr17	+	688	5	FSM	ENSG00000175061.19	ENST00000483588.2	688	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1385.20781383156	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGAGGGCCTGGGTGT	8	True	NA	16	True	AAAAAG	-15	NA	16439326	16463986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16440184_16440254_16462832_16462942_16463163_16463318_16463718
transcript_56878.nic	chr17	-	1231	6	NIC	ENSG00000141040.15	novel	7639	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	31.707412382596	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGCAACCTTCAATCA	-11	True	NA	-16	True	AATAAA	-19	NA	16569206	16553109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567676_16568951
transcript_56879.nnic	chr17	-	883	5	NIC	ENSG00000141040.15	novel	7639	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	33.1888535505522	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGCAACCTTCAATCA	-10	True	NA	-16	True	AATAAA	-19	NA	16569205	16553109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16568951
transcript_56880.known	chr17	-	4241	6	FSM	ENSG00000197566.10	ENST00000311331.12	4241	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	2.56124969497314	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCGTTTTATTTATTG	-13	True	NA	NA	False	ATTAAA	-16	NA	16653850	16620733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16624510_16633861_16633958_16634629_16634757_16647328_16647395_16649657_16649747_16653763
transcript_56881.known	chr17	+	8802	26	FSM	ENSG00000266302.6	ENST00000448331.7	8802	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.71705723163867	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTGTTTTTCCTCAT	15	True	NA	8	True	ATTAAA	-16	NA	16690260	16804453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16690745_16692978_16693050_16705150_16705400_16707468_16707543_16708795_16709636_16711678_16711816_16720197_16720232_16720516_16720659_16727526_16727741_16731799_16731984_16732537_16732667_16734689_16735644_16761424_16761719_16762312_16762534_16763964_16764176_16771976_16772020_16773496_16774283_16783622_16783734_16784422_16784481_16786947_16787123_16787934_16788136_16796042_16796235_16798241_16798531_16799950_16800372_16801035_16801129_16802258
transcript_56883.nnic	chr17	+	435	3	NNC	ENSG00000170160.18	novel	935	3	NA	NA	-22489	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGGGAGGCTGAGGTG	NA	False	NA	NA	False	AATAAA	-40	NA	16667047	16695486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_16667205_16692978_16693050_16695279
transcript_56884.nic	chr17	-	930	2	ISM	ENSG00000240505.9	ENST00000261652.7	1391	5	31580	0	524	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGGTTGGGTCTTTGA	NA	False	NA	-22	True	AATAAA	-28	NA	16940538	16939080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_16939798_16940325
transcript_56885.known	chr17	+	628	3	FSM	ENSG00000287114.1	ENST00000659709.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGCTTAAGTGTGAGT	NA	False	NA	NA	False	ATTAAA	-21	NA	17028359	17035057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_17028677_17028827_17028984_17034902
transcript_56886.known	chr17	-	3667	14	FSM	ENSG00000154803.13	ENST00000285071.9	3667	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	10.9965029406206	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTACTACATGGTTTTAT	-9	True	NA	-10	True	AATAAA	-17	NA	17237168	17212211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17213857_17214984_17215091_17215184_17215317_17216379_17216504_17217068_17217183_17219018_17219210_17221536_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_56889.known	chr17	-	1692	8	FSM	ENSG00000154803.13	ENST00000389169.9	1692	8	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	8.34461820943442	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTCCCAAGTTTTCCAT	20	True	NA	-7	True	AATAAA	-14	NA	17237139	17221170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_56894.known	chr17	-	1699	12	FSM	ENSG00000141030.13	ENST00000539941.6	1699	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	224.898912094205	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTCTTCTGTATCACTT	522	False	NA	-16	True	ATTAAA	-34	NA	17280777	17246819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17280573
transcript_569.known	chr1	-	1187	3	FSM	ENSG00000237613.2	ENST00000417324.1	1187	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	36081	34553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35175_35276_35482_35720
transcript_56907.known	chr17	-	1814	12	FSM	ENSG00000141030.13	ENST00000268717.10	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	648	junction_9	78.6130811565456	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	-3	True	NA	NA	False	AATAAA	-24	NA	17281246	17246615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_56908.known	chr17	-	1625	12	FSM	ENSG00000141030.13	ENST00000578317.5	1625	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	286.034413926739	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTTGAACATTAATG	108	False	NA	32	True	ATTAAA	-17	NA	17281191	17246836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17268046_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_56910.known	chr17	+	1581	5	FSM	ENSG00000205309.14	ENST00000389022.9	1581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.2226242670917	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGGCCTGCCCTAAGA	16	True	NA	18	True	AATAAA	-24	NA	17303372	17347663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_17303818_17306542_17306644_17323184_17323246_17344793_17344909_17346804
transcript_56911.known	chr17	-	636	1	FSM	ENSG00000215030.5	ENST00000392730.2	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	857	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCTGGGGACTTGGA	48	False	NA	NA	False	AAAAAG	-44	NA	17384012	17383376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17383400_17384000
transcript_56912.known	chr17	+	2209	2	FSM	ENSG00000141026.6	ENST00000268711.4	2209	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGCTTTTTGTACTGA	-9	True	NA	18	True	ATTAAA	-27	NA	17476999	17493221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_17477266_17491278
transcript_56914.known	chr17	-	1050	8	FSM	ENSG00000133027.18	ENST00000395781.6	1050	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	227.847335212122	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGCTCCAGCCTCTG	-18	True	NA	-12	True	AATAAA	-15	NA	17591708	17505564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226_17506302_17507168_17507200_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_56926.known	chr17	-	1021	7	FSM	ENSG00000133027.18	ENST00000255389.10	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_6	38.4812364088728	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-18	True	NA	-10	True	AATAAA	-17	NA	17591708	17505562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_56927.nic	chr17	-	1015	7	NIC	ENSG00000133027.18	novel	960	8	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_6	182.930238676448	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-1	True	NA	-10	True	AATAAA	-17	NA	17591768	17505562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591596
transcript_56933.nic	chr17	-	911	6	NIC	ENSG00000133027.18	novel	1021	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	45	junction_4	186.861017871572	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-24	True	NA	-10	True	AATAAA	-17	NA	17591714	17505562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17576919_17577028_17591530
transcript_5694.nnic	chr1	-	763	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	816	1408	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	54.6524371724527	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	1089	False	NA	NA	False	AATAAA	-18	NA	57423241	57144008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423016
transcript_56943.known	chr17	-	708	5	FSM	ENSG00000133027.18	ENST00000580147.5	708	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	218.290374272436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAATAAAGGCACCCTGA	7	True	NA	-36	True	NA	NA	NA	17591683	17505588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17576919_17577028_17591530
transcript_56946.known	chr17	-	960	8	FSM	ENSG00000133027.18	ENST00000435340.6	960	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	250.154156553147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	11	True	NA	-10	True	AATAAA	-17	NA	17591679	17505562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226_17506302_17507168_17507203_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591596
transcript_56947.known	chr17	-	383	2	FSM	ENSG00000133027.18	ENST00000582268.5	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	8915	False	NA	-10	True	AATAAA	-17	NA	17506323	17505562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226
transcript_5695.nnic	chr1	-	655	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	11	1408	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	42.6692707538653	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	2	True	NA	NA	False	AATAAA	-18	NA	57424046	57144008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423929
transcript_56950.known	chr17	-	5735	15	FSM	ENSG00000175662.18	ENST00000379504.8	5735	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	5.20792175244519	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-5	True	NA	NA	False	AATAAA	-17	NA	17972400	17843510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_56951.known	chr17	-	5595	14	FSM	ENSG00000175662.18	ENST00000581396.5	5595	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	6.72978014710751	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-15	True	NA	NA	False	AATAAA	-17	NA	17972410	17843510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17898595_17898675_17907446_17907532_17972261
transcript_56952.known	chr17	-	1766	14	FSM	ENSG00000175662.18	ENST00000395739.8	1766	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.76398398060942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTGCTTCCTGAGCAG	-9	True	NA	NA	False	NA	NA	NA	17972404	17847348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_56958.known	chr17	+	2064	14	FSM	ENSG00000171962.18	ENST00000313838.12	2064	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1.88736063790543	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	NA	False	NA	NA	False	AATAAA	-29	NA	17972812	18016873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_17972975_17973851_17973963_17977581_17977759_17983827_17983945_17987931_17988099_17992764_17992912_17994298_17994419_17994998_17995110_17997457_17997635_18004362_18004495_18006182_18006255_18007024_18007148_18016063_18016196_18016557
transcript_5696.nnic	chr1	-	791	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	-811	1408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	56.7881051707916	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	NA	False	NA	NA	False	AATAAA	-18	NA	57424871	57144008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57424618
transcript_56968.known	chr17	-	1553	8	FSM	ENSG00000171953.16	ENST00000474627.8	1553	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.4553368303793	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTAAGCTGGTTGT	12	True	NA	-1	True	NA	NA	NA	18039168	18018020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623_18024705_18026318_18026417_18028231_18028378_18028614_18028660_18038880
transcript_56969.known	chr17	-	633	3	FSM	ENSG00000171953.16	ENST00000497871.1	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	21.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACCTCCTCTCAAGTCA	-21	False	NA	NA	False	GGGGCT	-28	NA	18039201	18028110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18028378_18028614_18028660_18038880
transcript_56974.known	chr17	+	1900	13	FSM	ENSG00000108591.10	ENST00000225729.8	1900	13	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_8	19.6701974231747	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTTCAGACTGAGAAC	-8	True	NA	24	True	AATAAA	-14	NA	18087947	18107969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_56980.known	chr17	+	2531	12	FSM	ENSG00000108591.10	ENST00000467099.6	2531	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	115.924312725984	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTCAGACTGAGAACA	12	True	NA	25	True	AATAAA	-15	NA	18087967	18107970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18088088_18093812_18093969_18098269_18098360_18099016_18099094_18099632_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_56988.known	chr17	+	891	6	FSM	ENSG00000108591.10	ENST00000583355.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	117.69214077414	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCCCTGGAGGCT	51	False	NA	NA	False	NA	NA	NA	18088006	18107600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18088088_18093812_18093974_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_56993.known	chr17	+	577	4	FSM	ENSG00000108591.10	ENST00000578767.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	141.423713240272	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACCAAACTAGCCTTGT	6	True	NA	NA	False	NA	NA	NA	18087961	18099221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18088088_18093812_18093969_18098269_18098360_18099016
transcript_56999.known	chr17	-	4181	30	FSM	ENSG00000177731.16	ENST00000327031.9	4181	30	0	0	0	0	multi-exon	TRUE	canonical	3	526	junction_19	152.736870873204	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-8	True	NA	NA	False	ATTAAA	-24	NA	18258738	18244814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251817_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_57.known	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3966	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00136_+_0_1000
transcript_57001.nic	chr17	-	1721	10	ISM	ENSG00000177731.16	ENST00000545457.6	3975	29	11270	-5	-17	0	3prime_fragment	FALSE	canonical	3	993	junction_9	116.810493355797	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTATTTTTAATATTAAA	9822	False	NA	NA	False	ATTAAA	-25	NA	18247453	18244835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168
transcript_57013.known	chr17	-	926	4	FSM	ENSG00000177731.16	ENST00000577398.6	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_3	69.0716214438961	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTATTTTTAATATTAAA	1353	False	NA	NA	False	ATTAAA	-25	NA	18246062	18244835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18245420_18245554_18245661_18245743_18245851_18245933
transcript_57014.known	chr17	+	3236	4	FSM	ENSG00000177427.13	ENST00000323019.9	3236	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	3.85861230093008	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATCTCAGTCTGTTTG	47	True	NA	NA	False	AATAAA	-31	NA	18260661	18266552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263709
transcript_57019.nic	chr17	-	1524	5	ISM	ENSG00000177302.15	ENST00000580095.5	2929	19	-540	29748	-236	-1866	5prime_fragment	FALSE	canonical	3	118	junction_2	17.4122801493658	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGCTCTAACAGTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	18315243	18304551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_18305221_18306890_18306967_18308350_18308425_18308881_18308942_18314598
transcript_57022.nnic	chr17	-	1060	5	NIC	ENSG00000177302.15	novel	6596	19	NA	NA	0	15	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	77.8600507320667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACCAGGCATGGTGATG	-10	True	NA	NA	False	NA	NA	NA	18314994	18306534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_18306967_18307472_18307571_18308350_18308425_18308881_18308942_18314598
transcript_57024.known	chr17	-	913	4	FSM	ENSG00000177302.15	ENST00000472959.5	913	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	72.4998084288657	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGCCTGGGCAACAT	24	True	NA	NA	False	NA	NA	NA	18314960	18306587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18306967_18308312_18308425_18308881_18308942_18314598
transcript_57025.known	chr17	-	727	4	FSM	ENSG00000177302.15	ENST00000583328.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	20.0720922897661	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTTAA	210	False	NA	NA	False	NA	NA	NA	18314774	18306549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18306967_18308350_18308425_18308881_18308942_18314598
transcript_57026.nic	chr17	-	888	3	ISM	ENSG00000177302.15	ENST00000582981.5	3239	18	13	31811	0	15	5prime_fragment	FALSE	canonical	2	3	junction_1	75.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAACCAGGCATGGTGATG	-10	True	NA	NA	False	NA	NA	NA	18314994	18306534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_18306967_18308881_18308942_18314598
transcript_57027.known	chr17	-	474	2	FSM	ENSG00000177302.15	ENST00000580713.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGCTAATATA	172	False	NA	NA	False	AATAAA	-29	NA	18314812	18308681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18308942_18314598
transcript_57037.known	chr17	-	2527	12	FSM	ENSG00000176974.21	ENST00000316694.8	2527	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	35.8234883009679	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-19	True	NA	-10	True	AATAAA	-19	NA	18363550	18327872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_57043.known	chr17	-	1656	11	FSM	ENSG00000176974.21	ENST00000354098.7	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	79.5537554110427	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	80	False	NA	-9	True	ATTAAA	-12	NA	18363451	18328527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_57053.nnic	chr17	-	2287	10	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_3	93.7195711934885	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-19	True	NA	-10	True	AATAAA	-19	NA	18363550	18327872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_57077.known	chr17	+	8297	2	FSM	ENSG00000176994.11	ENST00000406438.5	8297	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTGATTACG	1	True	NA	9	True	AATAAA	-19	NA	18315292	18328056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18318150_18322616
transcript_57078.nic	chr17	+	1008	3	ISM	ENSG00000214860.5	ENST00000399134.5	1979	11	5663	0	-2963	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCCTTTTTGAACTC	5663	False	NA	NA	False	AATAAA	-17	NA	18383440	18389647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_18383588_18388218_18388289_18388856
transcript_57079.nnic	chr17	+	1173	3	NNC	ENSG00000220161.4	novel	1871	2	NA	NA	366	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCACGGTTTGTAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	18411524	18414380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_18412338_18412669_18412799_18414149
transcript_57082.known	chr17	+	1871	2	FSM	ENSG00000220161.4	ENST00000577684.1	1871	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCACGGTTTGTAGTC	NA	False	NA	NA	False	AATAAA	-14	NA	18411158	18414380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18412799_18414149
transcript_57083.nnic	chr17	+	750	2	NNC	ENSG00000220161.4	novel	1871	2	NA	NA	818	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACGGTTTGTAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	18411976	18414382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_18412494_18414149
transcript_57088.nic	chr17	-	1334	3	ISM	ENSG00000240445.6	ENST00000395675.7	5859	4	-6	12216	-6	906	5prime_fragment	FALSE	canonical	3	25	junction_1	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTTGAATTTAGGCGG	NA	False	NA	NA	False	NA	NA	NA	18682320	18679844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_18680830_18681614_18681847_18682203
transcript_57089.known	chr17	-	5859	4	FSM	ENSG00000240445.6	ENST00000395675.7	5859	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	3.2659863237109	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTCCTTTATTGCT	NA	False	NA	1	True	ATTAAA	-16	NA	18682314	18667628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18673056_18680740_18680830_18681614_18681847_18682203
transcript_57098.known	chr17	+	815	5	FSM	ENSG00000108448.23	ENST00000449697.8	836	5	21	0	18	0	multi-exon	FALSE	canonical	0	0	junction_4	5.35607132140714	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTTAATCTATTTCCT	24	False	NA	11	True	AATAAA	-23	NA	18698027	18704547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704128
transcript_57101.known	chr17	+	2989	7	FSM	ENSG00000171928.14	ENST00000476139.5	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	106.452519410716	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	50	False	NA	NA	False	TATAAA	-21	NA	18781313	18806714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18782550_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_57107.known	chr17	+	1876	7	FSM	ENSG00000171928.14	ENST00000307767.13	1876	7	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	46.1398839279954	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	-2	True	NA	NA	False	TATAAA	-21	NA	18781182	18806714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18781306_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_5711.nic	chr1	-	1929	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	24.7941525364349	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-26	True	NA	NA	False	AATAAA	-19	NA	58546755	58480718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
transcript_5712.known	chr1	-	1861	9	FSM	ENSG00000162600.12	ENST00000371226.8	1861	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.7561183575623	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	3	True	NA	NA	False	AATAAA	-19	NA	58546726	58480718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
transcript_57120.known	chr17	+	1958	12	FSM	ENSG00000141127.15	ENST00000268835.7	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	56.297615292331	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	-19	True	NA	35	True	AATAAA	-36	NA	18858130	18931287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18858262_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_57132.nic	chr17	+	1876	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	66.1202692069535	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	56	False	NA	16	True	AATAAA	-17	NA	18858097	18931268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_57142.known	chr17	+	1540	10	FSM	ENSG00000141127.15	ENST00000395656.6	1540	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	99.6907564099112	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTTAATAAAATAA	-13	True	NA	NA	False	NA	NA	NA	18858136	18931024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18858262_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_57149.known	chr17	+	968	9	FSM	ENSG00000141127.15	ENST00000412418.5	968	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	67.2918085653819	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTAGACCTCTTTTATT	-20	True	NA	NA	False	NA	NA	NA	18858129	18923984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913
transcript_57150.known	chr17	+	575	5	FSM	ENSG00000141127.15	ENST00000478622.6	575	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	86.2916566071135	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTCCATGATGTGCAA	-1	True	NA	NA	False	AAAAAG	-23	NA	18858148	18877845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18858262_18865468_18865565_18865801_18865953_18872582_18872650_18877697
transcript_57151.known	chr17	-	463	2	FSM	ENSG00000264273.1	ENST00000577360.1	463	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCGCTGAATTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	18861466	18859353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18859773_18861422
transcript_57154.known	chr17	+	758	1	FSM	ENSG00000265185.6	ENST00000577988.2	758	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGTTCTGGGATTACAGG	-6	True	NA	NA	False	NA	NA	NA	19061911	19062669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19061900_19062700
transcript_57155.nnic	chr17	+	572	3	NNC	ENSG00000230197.6	novel	392	2	NA	NA	-1055	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGATTTGTTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	19076719	19087878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_19076995_19079987_19080121_19087714
transcript_57157.nnic	chr17	+	1137	3	NNC	ENSG00000228157.4	novel	1176	2	NA	NA	-3533	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19089440	19094307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_19089641_19093212_19093307_19093464
transcript_5716.nnic	chr1	-	1431	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	-10	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_7	34.7333868671816	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	58546812	58480718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58546702
transcript_57160.known	chr17	-	637	1	FSM	ENSG00000262202.4	ENST00000573866.2	637	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCACTCCAGGCTTTTTTT	8	True	NA	NA	False	GGGGCT	-13	NA	19112636	19111999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19112000_19112600
transcript_57161.nnic	chr17	-	712	4	NNC	ENSG00000197665.7	novel	553	3	NA	NA	-3513	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.816496580927726	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19162624	19155726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_19156006_19158461_19158621_19158778_19158873_19162444
transcript_57162.nnic	chr17	-	1171	3	NNC	ENSG00000197665.7	novel	1173	2	NA	NA	-3570	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19162681	19157780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_19158621_19158778_19158873_19162444
transcript_57164.known	chr17	-	553	3	FSM	ENSG00000197665.7	ENST00000399087.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19158893	19155726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19156006_19158461_19158621_19158778
transcript_57167.known	chr17	+	309	3	FSM	ENSG00000072134.16	ENST00000582969.5	309	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAACAAAGAAAATAAAAA	99	False	NA	NA	False	TTTAAA	-3	NA	19237496	19283100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19237532_19281954_19282078_19282949
transcript_57172.nnic	chr17	+	727	4	NNC	ENSG00000281856.1	novel	536	3	NA	NA	-3528	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.816496580927726	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19215614	19222527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_19215810_19219381_19219476_19219633_19219793_19222248
transcript_57174.nnic	chr17	+	1129	3	NNC	ENSG00000281856.1	novel	1173	2	NA	NA	-3528	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19215614	19220473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_19215810_19219381_19219476_19219633
transcript_57175.known	chr17	+	536	3	FSM	ENSG00000281856.1	ENST00000628484.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19219377	19222527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19219476_19219633_19219793_19222248
transcript_57181.known	chr17	+	3059	7	FSM	ENSG00000166484.20	ENST00000395602.8	3059	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	49.2634640366356	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	228	False	NA	24	True	AATACA	-21	NA	19378252	19383544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19378543_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_57182.known	chr17	+	2902	7	FSM	ENSG00000166484.20	ENST00000395604.8	2902	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	57.5634915163731	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	-13	True	NA	24	True	AATACA	-21	NA	19378497	19383544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19378631_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_57184.known	chr17	-	923	7	FSM	ENSG00000108641.20	ENST00000461069.6	923	7	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	87.5195216318432	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCACCTTCTGTATATT	-7	True	NA	-6	True	AATAAA	-13	NA	19362614	19340920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19341327_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_57192.known	chr17	-	733	7	FSM	ENSG00000108641.20	ENST00000395616.7	733	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	83.5452305972971	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGTTCTCAGGGCTTTGT	10	True	NA	NA	False	NA	NA	NA	19362733	19343453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19343551_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_57195.known	chr17	-	1031	7	FSM	ENSG00000108641.20	ENST00000261499.11	913	7	0	-118	0	0	multi-exon	FALSE	canonical	3	139	junction_1	40.8275506109403	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	-12	True	NA	NA	False	NA	NA	NA	19362723	19343056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_57197.known	chr17	-	744	7	FSM	ENSG00000108641.20	ENST00000642870.2	744	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	83.7531093950149	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCCTAGGCCTGGGGCT	-2	True	NA	-10	True	AATAAA	-13	NA	19377910	19343178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19377858
transcript_57199.known	chr17	-	1346	6	FSM	ENSG00000108641.20	ENST00000647252.1	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	22.969545054267	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGCCAGGAGACCAG	1	True	NA	NA	False	NA	NA	NA	19362710	19343056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_57200.known	chr17	-	593	6	FSM	ENSG00000108641.20	ENST00000575478.7	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	87.2545700808846	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGTTGGGGTGAAT	-10	True	NA	NA	False	NA	NA	NA	19362721	19343727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362599
transcript_57205.known	chr17	-	755	6	FSM	ENSG00000108641.20	ENST00000268841.10	755	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	97.059569337598	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATGAGTCAGACACCT	74	False	NA	-2	True	ATTAAA	-23	NA	19362669	19346945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19347197_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_57208.known	chr17	-	601	6	FSM	ENSG00000108641.20	ENST00000440841.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	89.515585235198	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAGTATGAGTCAGAC	201	False	NA	-6	True	ATTAAA	-19	NA	19362542	19346949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19347174_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_57212.known	chr17	-	1932	6	FSM	ENSG00000166482.12	ENST00000395592.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	34.1970758983864	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-7	True	NA	-12	True	AATAAA	-20	NA	19387190	19383441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387040
transcript_57213.known	chr17	-	1820	6	FSM	ENSG00000166482.12	ENST00000299610.5	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	10.6282642044691	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTCAGGGGGAGTTG	-7	True	NA	-15	True	AATAAA	-17	NA	19387190	19383444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387149
transcript_5722.nic	chr1	-	1779	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	37.4236638003937	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-26	True	NA	NA	False	AATAAA	-19	NA	58546755	58480718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_58481175_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
transcript_57227.known	chr17	+	699	3	FSM	ENSG00000166484.20	ENST00000571657.5	699	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCAGGTTCATCTCAG	44	False	NA	NA	False	NA	NA	NA	19377798	19383339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19378102_19382812_19382947_19383077
transcript_5723.nic	chr1	-	1788	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	45.0328678153354	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	58546803	58480718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_58481175_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
transcript_57231.known	chr17	-	883	1	FSM	ENSG00000189343.7	ENST00000458332.1	883	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	5552	False	NA	NA	False	NA	NA	NA	19446852	19445969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19446000_19446900
transcript_57235.known	chr17	+	3183	11	FSM	ENSG00000072210.19	ENST00000581518.6	3183	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	111.594085864798	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATGCCTTGGAGCTC	NA	False	NA	NA	False	NA	NA	NA	19648135	19677130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19648266_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_57237.known	chr17	+	1708	11	FSM	ENSG00000072210.19	ENST00000672357.1	1708	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	108.779777532407	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATATGCAAAC	NA	False	NA	-73	True	AATGAA	-28	NA	19648722	19675664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19648844_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_57246.known	chr17	+	3703	10	FSM	ENSG00000072210.19	ENST00000176643.11	3703	10	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_9	40.2246776414433	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	-15	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_57247.known	chr17	+	3828	11	FSM	ENSG00000072210.19	ENST00000339618.8	3828	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	143.379252334499	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	-15	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19673150_19673276_19675557
transcript_57248.known	chr17	+	1558	9	FSM	ENSG00000072210.19	ENST00000630662.2	1558	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	120.922431231761	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGTCCCAACATTCCC	11	False	NA	5	True	AATAAA	-13	NA	19648805	19675742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19675557
transcript_57249.known	chr17	+	5084	10	FSM	ENSG00000072210.19	ENST00000672564.1	5084	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	145.0310311623	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTGGAGACAATCCTTT	-15	True	NA	-42	True	NA	NA	NA	19648750	19677529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19665048_19671720_19671957_19675495_19675500_19675561
transcript_57250.known	chr17	+	390	1	FSM	ENSG00000231096.1	ENST00000418418.1	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTCAATGATGACTATA	NA	False	NA	NA	False	NA	NA	NA	19840125	19840515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19840100_19840500
transcript_57253.known	chr17	-	4063	15	FSM	ENSG00000108599.15	ENST00000225737.11	4063	15	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_11	21.0203982563876	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCGGCTACTTTT	-7	True	NA	NA	False	TATAAA	-16	NA	19977828	19904301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_57255.nic	chr17	-	3500	14	NIC	ENSG00000108599.15	novel	4063	15	NA	NA	-27	-466	combination_of_known_junctions	FALSE	canonical	3	14	junction_8	38.6741814094663	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTGTGTCAACTTT	NA	False	NA	-7	True	AATATA	-16	NA	19977855	19904767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_57261.known	chr17	+	2167	12	FSM	ENSG00000128487.19	ENST00000681731.1	2167	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	58.6853213516699	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAAAACAC	-9	True	NA	-42	True	NA	NA	NA	20156057	20314700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232415_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_57262.known	chr17	+	3081	5	FSM	ENSG00000128487.19	ENST00000679740.1	3081	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	79.3473376995095	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGACGTGTGAAGAAAAA	-9	True	NA	NA	False	NA	NA	NA	20156057	20239273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_57264.known	chr17	+	2262	13	FSM	ENSG00000128487.19	ENST00000680740.1	2262	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.1354361228383	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAAAACAC	NA	False	NA	-42	True	NA	NA	NA	20096651	20314700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20096799_20110426_20110563_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_57265.known	chr17	-	1184	1	FSM	ENSG00000261033.1	ENST00000564549.1	1184	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTTTTTTTTTTAAAT	NA	False	NA	NA	False	AATAAA	-36	NA	20009234	20008050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_20008000_20009200
transcript_57268.nnic	chr17	-	455	2	Genic_Genomic	ENSG00000260907.1	novel	840	1	NA	NA	-1294	-6	multi-exon	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACGGTTTGTAGTCAT	NA	False	NA	NA	False	AATAAA	-16	NA	20532175	20530047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr17_-_20530281_20531953
transcript_57269.known	chr17	-	840	1	FSM	ENSG00000260907.1	ENST00000563569.1	840	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTGTAGTCATTTGTTC	NA	False	NA	NA	False	AATAAA	-22	NA	20530881	20530041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_20530000_20530900
transcript_57274.nic	chr17	+	1533	4	FSM	ENSG00000233098.10	ENST00000692309.1	1488	4	-40	-5	4	0	multi-exon	FALSE	canonical	3	15	junction_2	14.4299072146089	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	244	False	NA	NA	False	AATAAA	-29	NA	20868446	20930046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20892229_20892433_20924358_20924834_20929430
transcript_57275.known	chr17	+	709	4	FSM	ENSG00000233098.10	ENST00000417232.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATACAATGAAAAGGAAAAAA	16	False	NA	NA	False	NA	NA	NA	20868504	20924425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20887591_20887850_20892229_20892433_20924358
transcript_57280.known	chr17	+	1257	3	FSM	ENSG00000233098.10	ENST00000443508.8	1293	3	36	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	15	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	31	False	NA	NA	False	AATAAA	-29	NA	20868519	20930046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20924358_20924834_20929430
transcript_57281.known	chr17	+	3382	3	FSM	ENSG00000233098.10	ENST00000583962.2	3382	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	11.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	31	False	NA	NA	False	AATAAA	-20	NA	20868519	20905230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20892229_20892433_20902217
transcript_57285.known	chr17	+	4586	3	FSM	ENSG00000233098.10	ENST00000662319.2	4618	3	32	0	32	0	multi-exon	FALSE	canonical	2	8	junction_1	19.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGACCTCAACTGATC	17	False	NA	NA	False	NA	NA	NA	20921044	20933416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20921170_20924358_20924834_20929430
transcript_5729.known	chr1	-	383	2	FSM	ENSG00000162600.12	ENST00000460671.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACCTGTATTGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	58506199	58462551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58462795_58506059
transcript_57290.known	chr17	+	1910	1	FSM	ENSG00000109016.18	ENST00000581020.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	21126963	21128873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_21127000_21128900
transcript_57291.known	chr17	+	668	3	FSM	ENSG00000109016.18	ENST00000583388.1	668	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	54.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGTCCTTTGAATTCT	NA	False	NA	52	True	AATAAA	-41	NA	21183733	21191445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_21183811_21184370_21184464_21190947
transcript_57292.known	chr17	+	444	2	FSM	ENSG00000109016.18	ENST00000579099.1	444	2	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCAGCCTGGCCCCG	13	False	NA	NA	False	NA	NA	NA	21126946	21172416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_21126992_21172017
transcript_57294.known	chr17	-	827	4	FSM	ENSG00000178307.10	ENST00000583929.1	827	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.9620697104393	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGATCTCCTGGCAGTT	-9	True	NA	NA	False	NA	NA	NA	21214176	21198539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_21198841_21208391_21208540_21210935_21211228_21214090
transcript_57297.known	chr17	-	1246	3	FSM	ENSG00000178307.10	ENST00000577419.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	16	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCCGCTGTTCTCTC	6	True	NA	-11	True	ATTAAA	-13	NA	21214161	21197957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_21198841_21210935_21211228_21214090
transcript_57298.known	chr17	-	819	3	FSM	ENSG00000178307.10	ENST00000583264.1	819	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	46.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGTGAGGCAGCAGA	4	True	NA	NA	False	NA	NA	NA	21214163	21198255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_21198841_21211066_21211228_21214090
transcript_5730.known	chr1	-	1820	1	FSM	ENSG00000184292.7	ENST00000371225.4	1820	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCAGAAGTCGGCATTT	0	True	NA	NA	False	AATAAA	-31	NA	58577252	58575432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58575400_58577300
transcript_57300.known	chr17	-	958	2	FSM	ENSG00000178307.10	ENST00000317635.6	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	0	3962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCTGTTCTCTCTTTC	6	True	NA	-7	True	ATTAAA	-17	NA	21214161	21197953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_21198841_21214090
transcript_57301.known	chr17	+	1152	2	FSM	ENSG00000235530.7	ENST00000580291.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTGGGTCAGAGTGT	-13	True	NA	NA	False	AATAAA	-23	NA	21214330	21219120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_21214451_21218088
transcript_57313.known	chr17	-	2519	3	FSM	ENSG00000212719.14	ENST00000659749.1	2519	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	22.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTCACTTTATGGATTT	-8	True	NA	-16	True	AATAAA	-3	NA	21551669	21527376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_21529111_21535427_21535539_21550995
transcript_57314.known	chr17	+	371	1	FSM	ENSG00000239223.3	ENST00000475295.1	371	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	235	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGAAACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27274106	27274477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27274100_27274500
transcript_5732.known	chr1	-	7751	20	FSM	ENSG00000162601.11	ENST00000472487.6	7751	20	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_15	42.4312381659924	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	3	True	NA	-21	True	AATAAA	-15	NA	58700062	58654742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_57322.nnic	chr17	+	2297	10	NNC	ENSG00000109046.15	novel	4187	9	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	74	junction_6	181.757333813692	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	NA	False	NA	NA	False	AATACA	-10	NA	27294058	27312887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27307920_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_57329.known	chr17	+	4187	9	FSM	ENSG00000109046.15	ENST00000467843.6	4187	9	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_5	105.785159639715	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	NA	False	NA	38	True	ATTAAA	-20	NA	27294092	27313631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27309273_27310060_27310175_27311508_27311617_27312209
transcript_57332.known	chr17	+	5105	9	FSM	ENSG00000109046.15	ENST00000262394.7	5105	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_5	141.619593895054	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCGTCATAACCTTGG	2	True	NA	2	True	AATAAA	-15	NA	27294113	27315926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_57348.known	chr17	+	1611	7	FSM	ENSG00000109046.15	ENST00000348811.6	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	257.474917872272	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	19	False	NA	NA	False	AATACA	-10	NA	27294130	27312887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_57353.known	chr17	+	1900	5	FSM	ENSG00000109046.15	ENST00000581185.5	1900	5	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	32.5614803103299	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACACAGGCGCACAATGG	2	True	NA	NA	False	NA	NA	NA	27294113	27307789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781
transcript_57357.known	chr17	+	544	2	FSM	ENSG00000109046.15	ENST00000584354.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCAGTGTAGGGTAATAA	2	True	NA	NA	False	NA	NA	NA	27294113	27302009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27301787
transcript_57365.known	chr17	-	807	5	FSM	ENSG00000232859.10	ENST00000508862.5	807	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7539677541881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGCAATAAGATGAAGGT	NA	False	NA	NA	False	AAGAAA	-43	NA	27893383	27879050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_27879491_27880120_27880184_27880273_27880367_27882568_27882713_27893316
transcript_57377.nnic	chr17	-	1500	4	NNC	ENSG00000232859.10	novel	1419	4	NA	NA	3096	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	16.9705627484771	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	4131	False	NA	-5	True	AGTAAA	-18	NA	27889225	27878357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_27879491_27880273_27880367_27882568_27882713_27889095
transcript_57378.known	chr17	-	1419	4	FSM	ENSG00000232859.10	ENST00000379102.8	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	12.2565175405668	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-9	True	NA	-5	True	AGTAAA	-18	NA	27893365	27878357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27893316
transcript_57380.nnic	chr17	-	628	4	NNC	ENSG00000232859.10	novel	1419	4	NA	NA	3096	-179	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	16.9705627484771	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTGTTTTTTATTTT	4131	False	NA	-15	True	NA	NA	NA	27889225	27879229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_27879491_27880273_27880367_27882568_27882713_27889095
transcript_57385.nnic	chr17	-	1289	3	NIC	ENSG00000232859.10	novel	1419	4	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	18.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	NA	False	NA	-5	True	AGTAAA	-18	NA	27893379	27878357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_27879491_27880273_27880367_27893316
transcript_5739.nic	chr1	-	1275	8	ISM	ENSG00000162601.11	ENST00000659812.1	3533	20	-155	22903	-77	-5099	5prime_fragment	FALSE	canonical	3	101	junction_3	45.6874921480213	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAATTCCTGAGTTTTT	3054	False	NA	NA	False	AATAGA	-35	NA	58700154	58681870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_57390.known	chr17	-	1685	5	FSM	ENSG00000232859.10	ENST00000379103.7	1685	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.2208671582886	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTGTCTCCTTCCTGAG	1035	False	NA	-1	True	GATAAA	-19	NA	27892321	27878313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27882938_27883131_27892242
transcript_57395.known	chr17	+	1503	2	FSM	ENSG00000087095.13	ENST00000582037.2	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTCTCTTTGGGTTT	163	False	NA	16	True	AATAAA	-29	NA	28042838	28048926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28043332_28047916
transcript_57397.known	chr17	-	852	6	FSM	ENSG00000109083.14	ENST00000585313.5	852	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	73.4373202125459	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAATGGCTTGATGTA	26	True	NA	-25	True	AATAAA	-7	NA	28335439	28328336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332182_28335339
transcript_57404.known	chr17	+	1075	2	FSM	ENSG00000109084.14	ENST00000582384.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGTGTATCACCTGT	86	False	NA	-50	True	ACTAAA	-17	NA	28319268	28327511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28319366_28326533
transcript_57407.known	chr17	+	2463	3	FSM	ENSG00000109084.14	ENST00000226230.8	2463	3	0	0	0	0	multi-exon	TRUE	canonical	3	1015	junction_1	19	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTGCTTCTACTTT	17	True	NA	12	True	AATAAA	-17	NA	28319199	28328685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28319366_28325502_28325648_28326533
transcript_57408.known	chr17	-	1071	6	FSM	ENSG00000109083.14	ENST00000585089.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	53.3906358830835	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGATGTACCTTTTTT	16	True	NA	-17	True	AATAAA	-15	NA	28335449	28328328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_57409.known	chr17	-	860	5	FSM	ENSG00000109083.14	ENST00000395418.8	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_4	28.2001773044071	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-7	True	NA	-14	True	AATAAA	-18	NA	28335472	28328325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28335339
transcript_57410.known	chr17	-	974	6	FSM	ENSG00000109083.14	ENST00000357896.7	974	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.5368926253462	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATGTACCTTTTTTCC	-4	True	NA	-15	True	AATAAA	-17	NA	28335469	28328326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28329172_28329277_28330110_28330229_28330442_28330529_28331858_28331988_28335339
transcript_57411.known	chr17	-	774	4	FSM	ENSG00000109083.14	ENST00000588477.5	774	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.9814793641114	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTACCTTTTTTCCTG	-24	True	NA	-13	True	AATAAA	-19	NA	28335489	28328324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28330442_28330529_28331858_28331988_28335339
transcript_57412.known	chr17	-	2670	11	FSM	ENSG00000004142.12	ENST00000540200.6	2670	11	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_7	30.6	2839	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTGAGTTCAATGTTA	-26	True	NA	-13	True	ATTAAA	-14	NA	28357527	28346632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28348232_28349082_28349163_28350437_28350564_28350765_28350793_28351663_28351801_28352911_28353020_28353240_28353317_28353694_28353792_28354487_28354586_28355794_28355877_28357287
transcript_57414.known	chr17	+	3570	7	FSM	ENSG00000109079.10	ENST00000226225.7	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	5.76387215526353	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGCCATGTTTAC	-2	True	NA	9	True	AATAAA	-17	NA	28335760	28347009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28335857_28339407_28339727_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_57416.known	chr17	+	1656	6	FSM	ENSG00000109079.10	ENST00000544907.6	1656	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	46.1666546329708	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAGAATCAATCTGAG	16	False	NA	NA	False	NA	NA	NA	28335601	28345255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28335857_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_57420.known	chr17	-	1626	8	FSM	ENSG00000109072.14	ENST00000226218.9	1626	8	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_3	4.05069910821652	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAATTATTGTTCTGA	-9	True	NA	-4	True	AATAAA	-17	NA	28370307	28367283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28367482_28367714_28368060_28368520_28368674_28368871_28369029_28369288_28369429_28369506_28369852_28369926_28370047_28370139
transcript_57425.known	chr17	+	493	2	FSM	ENSG00000265254.1	ENST00000580714.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTCTGGTATATTCAA	NA	False	NA	34	True	AAAAAG	-11	NA	28405239	28406796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28405452_28406515
transcript_57426.known	chr17	+	3082	6	FSM	ENSG00000244045.13	ENST00000292114.8	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	5.34415568635495	583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTATCTTTGCTTCAT	-9	True	NA	19	True	ATTAAA	-16	NA	28357646	28363683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361156
transcript_57434.known	chr17	+	585	1	FSM	ENSG00000263266.2	ENST00000571702.1	585	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAATGACTAAATAAAA	42	False	NA	NA	False	NA	NA	NA	28467821	28468406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28467800_28468400
transcript_57435.known	chr17	-	1379	5	FSM	ENSG00000109103.12	ENST00000335765.9	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	31.4880929876676	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-15	True	NA	-8	True	AATAAA	-18	NA	28552624	28546707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591_28548706_28552337
transcript_57436.known	chr17	-	1653	4	FSM	ENSG00000109103.12	ENST00000301032.8	1653	4	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	15.9652400197707	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-22	True	NA	-8	True	AATAAA	-18	NA	28552631	28546707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28547850_28547998_28548102_28548591_28548706_28552337
transcript_5744.known	chr1	-	378	5	FSM	ENSG00000162601.11	ENST00000483003.5	378	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	24.3451740597598	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTTAAAAATTATGGAAT	-7	True	NA	-128	True	TATAAA	-11	NA	58700072	58690187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_57440.known	chr17	-	2529	12	FSM	ENSG00000087111.21	ENST00000308360.8	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_11	24.4729569082837	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-4	True	NA	-5	True	AATAAA	-29	NA	28571524	28553386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571462
transcript_57442.known	chr17	-	2815	11	FSM	ENSG00000087111.21	ENST00000395346.6	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_7	21.6168915434204	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-16	True	NA	-5	True	AATAAA	-29	NA	28571536	28553386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048
transcript_57443.known	chr17	-	2397	11	FSM	ENSG00000087111.21	ENST00000268758.13	2397	11	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_10	91.1754352882398	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTACTCTTTCT	-8	True	NA	-1	True	AATAAA	-33	NA	28571528	28553382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571462
transcript_57451.known	chr17	-	1722	10	FSM	ENSG00000109107.14	ENST00000395321.6	1722	10	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_9	62.1118067939573	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGTCTGTTTTACA	7643	False	NA	0	True	AATAAA	-19	NA	28576948	28573114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28575964_28576021_28576800
transcript_57454.known	chr17	-	1608	9	FSM	ENSG00000109107.14	ENST00000226253.9	1608	9	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_8	21.9598354957409	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTACTTTGCCTGTCTGTT	3	True	NA	-5	True	AATAAA	-14	NA	28576895	28573119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28576800
transcript_57457.known	chr17	-	3786	24	FSM	ENSG00000076382.17	ENST00000321765.10	3786	24	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_17	70.0284036351678	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-6	True	NA	-13	True	AATAAA	-15	NA	28599025	28577573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28593067_28598509_28598636_28598895
transcript_57462.known	chr17	-	1582	11	FSM	ENSG00000007202.15	ENST00000580882.5	1582	11	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	28.1211664053965	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAATGATAAGGAATGTC	-10	True	NA	NA	False	AATAAA	-17	NA	28645155	28639060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_57467.known	chr17	-	7428	39	FSM	ENSG00000007202.15	ENST00000528896.7	7428	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	74.1777503208292	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCATTTTTGTGTGTGTG	-13	True	NA	-10	True	AAAAAG	-16	NA	28645158	28614445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28615247_28615663_28615799_28616095_28616198_28616378_28616510_28616617_28616754_28616888_28617000_28617231_28617319_28618790_28618972_28619653_28619776_28619859_28620016_28620508_28620631_28620987_28621171_28621398_28621499_28623759_28623967_28624232_28624391_28628264_28628560_28631478_28631682_28631819_28631920_28632048_28632240_28632941_28633163_28633282_28633402_28633548_28633752_28633894_28634087_28634516_28635610_28636964_28637171_28637835_28638095_28638251_28638416_28638523_28638643_28639314_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_57468.known	chr17	-	719	7	FSM	ENSG00000076382.17	ENST00000582076.1	719	7	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	263.472800620228	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTTCTCCAAGCTTA	5185	False	NA	-19	True	AATAAA	-9	NA	28579406	28577579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28577752_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364
transcript_5747.known	chr1	-	698	3	FSM	ENSG00000162601.11	ENST00000489282.1	698	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	7	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTTTTCCCTACATT	-12	True	NA	NA	False	AATAAA	-26	NA	58700077	58692405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58692932_58695128_58695208_58699984
transcript_57474.known	chr17	-	823	2	FSM	ENSG00000132581.10	ENST00000585749.5	823	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-21	True	NA	-3	True	GATAAA	-20	NA	28662180	28648588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28649277_28662045
transcript_57475.known	chr17	-	1309	3	FSM	ENSG00000132581.10	ENST00000247020.9	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	11	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTATCTGTTACTGC	3	True	NA	NA	False	AATAAA	-17	NA	28661906	28648345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28649277_28655286_28655484_28661725
transcript_57476.known	chr17	-	1025	3	FSM	ENSG00000132581.10	ENST00000592250.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	130.5	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-26	True	NA	-3	True	GATAAA	-20	NA	28662185	28648588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28649277_28655286_28655484_28662045
transcript_57477.nic	chr17	+	817	5	ISM	ENSG00000109111.15	ENST00000314616.11	6404	37	-273	27680	-266	0	5prime_fragment	FALSE	canonical	3	284	junction_4	8.26135582092915	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGACGAGGACGATGACGA	-4	True	NA	-32	True	NA	NA	NA	28661931	28674999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969
transcript_57478.nnic	chr17	+	516	3	NNC	ENSG00000109111.15	novel	6404	37	NA	NA	3	-3469	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGGGCAACAAGAGCGA	1	True	NA	NA	False	NA	NA	NA	28662207	28670854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_28662343_28668532_28668631_28670571
transcript_57480.nnic	chr17	+	743	2	NNC	ENSG00000109111.15	novel	6404	37	NA	NA	-263	-3417	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAATTCTCTTCAAATC	-1	True	NA	NA	False	AAAAAG	-9	NA	28661934	28670906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_28662343_28670571
transcript_57481.known	chr17	+	6404	37	FSM	ENSG00000109111.15	ENST00000314616.11	6404	37	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	44.3167175072487	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCCTCTGCCGTTCAT	-2	True	NA	7	True	AGTAAA	-15	NA	28662204	28702679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28662343_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
transcript_57482.known	chr17	+	5569	38	FSM	ENSG00000109111.15	ENST00000347486.8	5569	38	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	86.9516124475651	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTCTTTGGTGGTCAAC	-9	True	NA	23	True	CATAAA	-17	NA	28662197	28701735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28662343_28672756_28672859_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
transcript_57485.known	chr17	-	1684	5	FSM	ENSG00000167525.15	ENST00000682792.1	1684	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	24.0974583722018	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-22	True	NA	-5	True	AATAAA	-18	NA	28711888	28703196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28706679_28706764_28711569
transcript_57491.nic	chr17	-	1703	4	NIC	ENSG00000167525.15	novel	1566	4	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	21.7919455049082	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	1	True	NA	-5	True	AATAAA	-18	NA	28711292	28703196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28704213_28704306_28704436_28704707_28704844_28710870
transcript_57492.known	chr17	-	1566	4	FSM	ENSG00000167525.15	ENST00000301039.6	1566	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	20.4993224820291	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	12	True	NA	-5	True	AATAAA	-18	NA	28711854	28703196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28711569
transcript_57495.known	chr17	-	1007	4	FSM	ENSG00000167525.15	ENST00000579650.5	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	23.3285709425636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCGCCACCGCCTCCC	-6	True	NA	NA	False	NA	NA	NA	28711299	28704080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28704213_28704306_28704617_28704707_28704844_28710870
transcript_57501.known	chr17	-	810	4	FSM	ENSG00000167525.15	ENST00000415329.7	810	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	23.5372045918796	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGAGAACTGTCCAGCGA	9985	False	NA	NA	False	NA	NA	NA	28707883	28703713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28707837
transcript_57502.nic	chr17	-	927	4	NIC	ENSG00000167525.15	novel	1007	4	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	21.7919455049082	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGAGATGGATGAGAAGG	9608	False	NA	NA	False	AAAAAG	-18	NA	28711235	28703915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28704213_28704306_28704436_28704707_28704844_28710870
transcript_57505.nnic	chr17	-	1608	3	NIC	ENSG00000167525.15	novel	1684	5	NA	NA	-144	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	29.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	8811	False	NA	-5	True	AATAAA	-18	NA	28712032	28703196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28704213_28704306_28704436_28711569
transcript_57512.known	chr17	-	766	2	FSM	ENSG00000167525.15	ENST00000581289.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTCACAAGCCAGGAAGG	9096	False	NA	NA	False	AAAAAG	-12	NA	28711747	28703624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28704213_28711569
transcript_57516.known	chr17	-	863	11	FSM	ENSG00000109113.20	ENST00000436730.7	863	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	357.163883952451	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGCCCAGCCCTAGG	18	True	NA	NA	False	NA	NA	NA	28718161	28714624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_57518.known	chr17	-	1592	11	FSM	ENSG00000109113.20	ENST00000301043.10	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	356.879825711681	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	6	True	NA	-1	True	ATTAAA	-19	NA	28718415	28714283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
transcript_57523.known	chr17	-	1184	11	FSM	ENSG00000109113.20	ENST00000450529.5	1184	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	446.390871322432	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	13	True	NA	-2	True	ATTAAA	-18	NA	28718166	28714284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_5753.nic	chr1	-	1011	4	NIC	ENSG00000235215.2	novel	317	3	NA	NA	-312	1864	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.69967317119759	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGCATTTCTGTGTCC	NA	False	NA	5	True	AATAAA	-19	NA	59078428	59054134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_59054531_59056012_59056186_59059637_59059683_59078031
transcript_57548.known	chr17	-	914	9	FSM	ENSG00000109113.20	ENST00000430132.6	914	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_8	430.744685834892	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGGCTGAGGAGACTGT	9532	False	NA	NA	False	NA	NA	NA	28718405	28714646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28718121
transcript_5755.known	chr1	-	317	3	FSM	ENSG00000235215.2	ENST00000451090.1	317	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTCACATTGAT	NA	False	NA	NA	False	NA	NA	NA	59078116	59055998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_59056186_59059637_59059683_59078031
transcript_57565.known	chr17	-	1741	10	FSM	ENSG00000109113.20	ENST00000395245.9	1741	10	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_8	121.045446010992	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	0	True	NA	-1	True	ATTAAA	-19	NA	28717868	28714283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_57566.known	chr17	-	1597	10	FSM	ENSG00000109113.20	ENST00000395243.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	345.438851318146	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	5	True	NA	-1	True	ATTAAA	-19	NA	28717748	28714283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_57567.known	chr17	-	1293	10	FSM	ENSG00000109113.20	ENST00000415040.6	1293	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	500.585163756218	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	-4	True	NA	-2	True	ATTAAA	-18	NA	28718183	28714284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28716902_28716995_28717212_28717426_28718121
transcript_57568.known	chr17	-	717	10	FSM	ENSG00000109113.20	ENST00000412625.5	717	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	387.011851032376	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGCAGCACTGACCTTTG	-8	True	NA	NA	False	NA	NA	NA	28718429	28714872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718369
transcript_57573.known	chr17	+	3573	15	FSM	ENSG00000160602.14	ENST00000268766.11	3573	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	13.4892247247004	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	-8	True	NA	12	True	AATAAA	-14	NA	28728787	28743455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28728861_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737515_28737674_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
transcript_57596.known	chr17	+	580	6	FSM	ENSG00000198242.14	ENST00000394935.7	580	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6717.78128253667	5970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACATGCCTGTCTGTCA	9	True	NA	55	True	AATATA	-23	NA	28720263	28723933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720329_28720413_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_57601.known	chr17	+	636	5	FSM	ENSG00000198242.14	ENST00000496182.5	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	5907.74417078973	11424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	78	False	NA	58	True	AATATA	-26	NA	28720078	28723936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720214_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_57603.known	chr17	+	688	5	FSM	ENSG00000198242.14	ENST00000394938.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	5901.40197326025	11637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	-11	True	NA	58	True	AATATA	-26	NA	28720243	28723936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_57607.known	chr17	-	1042	4	FSM	ENSG00000160606.11	ENST00000292090.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_3	2.94392028877595	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTCCTTTATTGGGC	-12	True	NA	1	True	AATGAA	-15	NA	28726233	28724347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28725903
transcript_57609.known	chr17	-	784	4	FSM	ENSG00000160606.11	ENST00000394933.7	784	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_3	119.04714285619	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	1005	False	NA	-104	True	NA	NA	NA	28726932	28724452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28726755
transcript_57613.known	chr17	+	590	2	FSM	ENSG00000160602.14	ENST00000581000.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTAGCCGGGTG	18	False	NA	NA	False	AATACA	-6	NA	28728813	28734525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28728861_28733982
transcript_57614.known	chr17	+	970	5	FSM	ENSG00000198242.14	ENST00000422514.7	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	11065	junction_1	1714.97208432091	108237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAGTGTTTTCAAT	3	True	NA	35	True	AATAAA	-23	NA	28719984	28724359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720031_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_57615.known	chr17	+	587	5	FSM	ENSG00000198242.14	ENST00000355731.8	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	6070.63796070891	11867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGGGCTTGGGCAAGA	44	False	NA	114	True	NA	NA	NA	28720298	28723992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720329_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_57616.known	chr17	+	639	4	FSM	ENSG00000198242.14	ENST00000472628.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	11726	junction_3	1471.09264003174	11679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	16	False	NA	58	True	AATATA	-26	NA	28720568	28723936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720891_28722722_28722900_28723570_28723641_28723866
transcript_57617.known	chr17	-	408	2	FSM	ENSG00000160606.11	ENST00000581236.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTGAAGTCCTTGTCC	3087	False	NA	-9	True	AATGAA	-5	NA	28724850	28724357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28724654_28724738
transcript_57618.known	chr17	-	578	4	FSM	ENSG00000160606.11	ENST00000580518.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	108.677913528412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTACTTTTCCCGCCTC	2	True	NA	NA	False	NA	NA	NA	28727935	28724598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28727818
transcript_5762.nnic	chr1	-	454	3	NNC	ENSG00000224609.8	novel	2544	2	NA	NA	-82	-1570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCTGGCATTCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	59296573	59293300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_59293391_59295108_59295268_59296368
transcript_57621.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583307.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	137.07912860826	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	60	False	NA	-18	True	AGTAAA	-15	NA	28842727	28755979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_57624.known	chr17	-	4162	4	FSM	ENSG00000173065.14	ENST00000577376.6	4162	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	145.249976094854	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28834292_28834327_28842681
transcript_57625.known	chr17	-	4050	4	FSM	ENSG00000173065.14	ENST00000577682.6	4050	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	16.539514973407	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759765_28766585_28766708_28834292_28834327_28842681
transcript_57626.known	chr17	-	4169	4	FSM	ENSG00000173065.14	ENST00000581229.6	4169	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	148.728686614998	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	4	True	NA	-18	True	AGTAAA	-15	NA	28842783	28755979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28842681
transcript_5763.known	chr1	-	338	1	FSM	ENSG00000270457.1	ENST00000604999.1	338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGGATTCATGTTTCTTT	3063	False	NA	NA	False	ATTAAA	-23	NA	59289640	59289302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_59289300_59289600
transcript_57630.known	chr17	-	4246	3	FSM	ENSG00000173065.14	ENST00000452648.8	4246	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	31.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	1	True	NA	-18	True	AGTAAA	-15	NA	28812435	28755979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28812208
transcript_57631.known	chr17	-	4128	3	FSM	ENSG00000173065.14	ENST00000581407.6	4128	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	142	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-3	True	NA	-18	True	AGTAAA	-15	NA	28842790	28755979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28842681
transcript_57633.known	chr17	-	4010	3	FSM	ENSG00000173065.14	ENST00000582266.6	4010	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	3	True	NA	-18	True	AGTAAA	-15	NA	28842784	28755979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759765_28766585_28766708_28842681
transcript_57636.known	chr17	+	1841	10	FSM	ENSG00000132591.12	ENST00000254928.10	1841	10	0	0	0	0	multi-exon	TRUE	canonical	3	494	junction_9	42.2727767519593	4362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	-5	True	NA	33	True	AATAAA	-22	NA	28855015	28861061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
transcript_57638.nnic	chr17	-	2522	10	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_9	394.001410036958	1408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	3	True	NA	-7	True	AATAAA	-17	NA	28897669	28879338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28897525
transcript_57641.known	chr17	-	1569	3	FSM	ENSG00000167536.14	ENST00000426464.2	1569	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	106.5	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	-11	True	NA	-12	True	AATAAA	-15	NA	28902965	28897783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28898893_28900989_28901302_28902817
transcript_57642.known	chr17	+	583	3	FSM	ENSG00000266642.2	ENST00000580603.2	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTATTATAATTACTAA	4603	False	NA	NA	False	AATAAA	-26	NA	28897737	28899402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28897987_28898289_28898506_28899284
transcript_57647.known	chr17	+	2169	8	FSM	ENSG00000179761.12	ENST00000323372.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	18.5075825608019	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	5	True	NA	28	True	AATAAA	-33	NA	29043140	29057216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_29043340_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
transcript_57651.nnic	chr17	-	692	3	NNC	ENSG00000109118.14	novel	4506	15	NA	NA	-117	-12231	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTTTGCTGTATCCC	421	False	NA	NA	False	AATAAA	-19	NA	28951071	28939244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_28939578_28950064_28950247_28950894
transcript_57653.nic	chr17	-	1350	2	ISM	ENSG00000063015.21	ENST00000442608.7	3805	16	-8	25666	-8	753	5prime_fragment	FALSE	canonical	3	34	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGCTCATGCCTGTA	533	False	NA	-7	True	AATAAA	-13	NA	29005921	28980796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_28982040_29005814
transcript_57654.known	chr17	-	517	3	FSM	ENSG00000263613.1	ENST00000581964.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATGGGGGCTCTATGTA	NA	False	NA	NA	False	AGTAAA	-24	NA	29011009	29009798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29009917_29010076_29010440_29010973
transcript_57655.known	chr17	-	9980	42	FSM	ENSG00000196535.18	ENST00000527372.7	9980	42	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_32	28.7968535527576	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTCTTTTGTCTTTGT	6	True	NA	NA	False	AATAAA	-23	NA	29180398	29071121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29074915_29082315_29082439_29085603_29085649_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
transcript_57656.known	chr17	+	798	6	FSM	ENSG00000108255.8	ENST00000225387.8	798	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTAGACTGAATTAACT	0	True	NA	NA	False	AATAAA	-21	NA	29246858	29254494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_29246895_29249141_29249207_29250181_29250301_29252063_29252206_29253639_29253783_29254201
transcript_57657.known	chr17	-	10877	4	FSM	ENSG00000108256.9	ENST00000225388.9	10877	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	10.3708994574027	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTTGTTATCTTTT	-1	True	NA	-13	True	AATAAA	-16	NA	29294148	29255838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29264592_29267497_29267531_29285991_29287717_29293782
transcript_57658.known	chr17	-	341	1	FSM	ENSG00000239256.1	ENST00000492004.1	341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	29340822	29340481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29340500_29340800
transcript_57661.known	chr17	+	12643	20	FSM	ENSG00000160551.12	ENST00000261716.8	12643	20	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.09715799074286	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGTCCAGTTTTTTTA	2	True	NA	17	True	AATAAA	-17	NA	29390362	29551903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_29391025_29451454_29451681_29467144_29467217_29475669_29475772_29477660_29477707_29478250_29478348_29480367_29480482_29482196_29482289_29489663_29489758_29491783_29491866_29495559_29495728_29498317_29498522_29502588_29502724_29507895_29508133_29510863_29510993_29517452_29517657_29522279_29522520_29530406_29530620_29534117_29534301_29542560
transcript_57662.nic	chr17	+	917	4	NIC	ENSG00000264290.1	novel	465	2	NA	NA	-870	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	192.569179488538	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAATAGCTCCAGG	-4	True	NA	NA	False	NA	NA	NA	29568709	29570519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_29568831_29569017_29569087_29569317_29569963_29570437
transcript_57663.known	chr17	+	465	2	FSM	ENSG00000264290.1	ENST00000579050.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAATAGCTCCAGG	492	False	NA	NA	False	NA	NA	NA	29569579	29570519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_29569963_29570437
transcript_57665.known	chr17	-	965	8	FSM	ENSG00000141298.19	ENST00000579040.5	965	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.0709255283711	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTACATCTATATCAT	34	True	NA	NA	False	AATAAA	-32	NA	29930173	29673900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29674160_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
transcript_57667.known	chr17	-	560	3	FSM	ENSG00000141298.19	ENST00000582084.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTTTTCTGTAGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	29930276	29925216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29925556_29929937_29930041_29930158
transcript_57668.nnic	chr17	-	688	3	NNC	ENSG00000141298.19	novel	570	2	NA	NA	-27	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATATTTTAGTTTTCT	7	True	NA	NA	False	AATAAA	-16	NA	29930200	29925223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_29925556_29928491_29928585_29929937
transcript_57669.nic	chr17	-	2307	2	ISM	ENSG00000141298.19	ENST00000577483.1	1630	7	-121	116092	0	1694	5prime_fragment	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGGAAGAAGAAGAAT	-21	True	NA	NA	False	ACTAAA	-14	NA	29930228	29791921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_29793938_29929937
transcript_57671.known	chr17	-	570	2	FSM	ENSG00000141298.19	ENST00000590153.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTGATACCTATATT	-21	True	NA	NA	False	NA	NA	NA	29930228	29925276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29925556_29929937
transcript_57678.known	chr17	+	1242	8	FSM	ENSG00000126653.18	ENST00000475652.5	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	177.605386937975	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGAACCGACCCAGTG	9	True	NA	16	True	AAGAAA	-17	NA	30116828	30185193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_5768.nic	chr1	+	1935	16	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	16.5939748101532	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	-26	True	NA	8	True	AATAAA	-19	NA	59296782	59762724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_57695.known	chr17	+	2506	7	FSM	ENSG00000126653.18	ENST00000247026.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	78.9444248963929	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCATTTATTTTAAAA	-4	True	NA	19	True	AATAAA	-22	NA	30116815	30186475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_57700.known	chr17	+	1800	7	FSM	ENSG00000126653.18	ENST00000394826.8	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	200.452543566357	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGAGTGTGTTACCAG	0	True	NA	-14	True	NA	NA	NA	30116819	30185744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30156539_30156663_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_57701.known	chr17	+	774	7	FSM	ENSG00000126653.18	ENST00000580103.6	774	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	145.914072887665	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAATCAAGGGGCTTCTC	352	False	NA	NA	False	TATAAA	-5	NA	30117171	30184630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30117333_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_57724.nic	chr17	+	412	5	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-29	7331	6	0	5prime_fragment	FALSE	canonical	3	233	junction_1	88.3544000036218	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	-3	True	NA	NA	False	AAAAAG	-8	NA	30116786	30179144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089
transcript_5773.known	chr1	+	1873	16	FSM	ENSG00000172456.18	ENST00000303721.12	1873	16	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.8096131631513	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTTCATTTCAAAA	14	True	NA	14	True	AATAAA	-25	NA	59297093	59762730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_59297151_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_57733.known	chr17	+	540	4	FSM	ENSG00000126653.18	ENST00000479218.6	540	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	16.539514973407	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAGCATTTATAGAAATT	7	True	NA	NA	False	TATAAA	-35	NA	30116826	30128236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30127858
transcript_57735.nic	chr17	+	322	4	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-29	8311	6	0	5prime_fragment	FALSE	canonical	3	233	junction_1	92.3628111790069	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAAATTGCTTTTG	-3	True	NA	28	True	AAAAAG	-8	NA	30116786	30178164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070
transcript_57740.known	chr17	+	582	4	FSM	ENSG00000126653.18	ENST00000585881.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	206.856364551724	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	172	False	NA	NA	False	AAAAAG	-8	NA	30116991	30179144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30117333_30172541_30172599_30178070_30178200_30179089
transcript_57741.known	chr17	+	482	3	FSM	ENSG00000126653.18	ENST00000584423.5	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAGTTATATATATAT	NA	False	NA	NA	False	NA	NA	NA	30116780	30128163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30118079_30118174_30127858
transcript_57743.known	chr17	+	2420	6	FSM	ENSG00000126653.18	ENST00000612959.4	2420	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	155.444652529445	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	-13	True	NA	18	True	AATAAA	-21	NA	30116806	30186474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_57744.known	chr17	+	497	4	FSM	ENSG00000126653.18	ENST00000588614.1	497	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	39.6568615332412	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAGAAAAGAGGGCT	259	False	NA	NA	False	AAGAAA	-26	NA	30118037	30179264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30118174_30172541_30172599_30178070_30178200_30179089
transcript_57745.known	chr17	+	564	7	FSM	ENSG00000126653.18	ENST00000584317.5	564	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	199.806295084904	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAGATCAGAAAAAAGGAA	10	True	NA	NA	False	NA	NA	NA	30116829	30179120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30118079_30118174_30156539_30156663_30163066_30163163_30172541_30172599_30178070_30178200_30179089
transcript_57747.known	chr17	-	2307	12	FSM	ENSG00000108578.15	ENST00000261714.11	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_8	37.309737722552	3494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	23	True	NA	-16	True	AATAAA	-19	NA	30291944	30248202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
transcript_57752.known	chr17	+	5987	9	FSM	ENSG00000108587.16	ENST00000451249.7	5987	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	70.7582813174543	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	-9	True	NA	NA	False	NA	NA	NA	30477407	30527592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30477465_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_57755.known	chr17	+	6039	9	FSM	ENSG00000108587.16	ENST00000225724.9	6039	9	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_2	85.8297733889587	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATATCCTTGGGTTTGTC	NA	False	NA	NA	False	NA	NA	NA	30477361	30527592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_57759.known	chr17	+	1011	9	FSM	ENSG00000108587.16	ENST00000467337.6	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	155.582725181814	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGTTGCTTTTGTC	6	True	NA	NA	False	ATTAAA	-14	NA	30477422	30522609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30477487_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_57760.known	chr17	+	947	9	FSM	ENSG00000108587.16	ENST00000414833.2	947	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	160.16163710452	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTTTCTAACACATT	25	False	NA	NA	False	NA	NA	NA	30477441	30522558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30477487_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_57761.nnic	chr17	+	1524	9	NNC	ENSG00000108587.16	novel	1011	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	155.877355635769	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGTTGCTTTTGTC	0	True	NA	NA	False	ATTAAA	-14	NA	30477416	30522609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_30477994_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_5777.nic	chr1	+	1719	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	15.7546559363723	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	-25	True	NA	8	True	AATAAA	-19	NA	59296783	59762724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_57772.known	chr17	+	723	4	FSM	ENSG00000108587.16	ENST00000491489.6	723	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_2	133.7235955245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGGAATTATTTACTATA	6	True	NA	NA	False	NA	NA	NA	30477422	30485134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30477465_30481142_30481264_30484213_30484302_30484662
transcript_57774.known	chr17	+	1273	7	FSM	ENSG00000214719.13	ENST00000651170.1	1273	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	28.6569751059358	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGAAGTTAAGTTG	168	False	NA	NA	False	AATAAA	-22	NA	30600891	30634326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
transcript_57778.known	chr17	+	815	3	FSM	ENSG00000250462.8	ENST00000412831.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	69.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAACGTCACTTTCCC	NA	False	NA	NA	False	AATACA	-37	NA	30631754	30634170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30632100_30633097_30633391_30633993
transcript_57779.known	chr17	-	1352	3	FSM	ENSG00000231421.8	ENST00000436477.7	1352	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCGTGTGATCTGGTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	30577000	30573470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30573778_30573935_30573986_30576005
transcript_57780.known	chr17	-	561	3	FSM	ENSG00000231421.8	ENST00000584763.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTCGTGTGATCTGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	30574420	30573472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30573778_30573935_30573986_30574214
transcript_57792.known	chr17	-	1392	7	FSM	ENSG00000176390.12	ENST00000578692.1	1392	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.6178371974522	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTATAGAAGATATAGG	37	True	NA	NA	False	AATAAA	-16	NA	30824671	30783935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30824522
transcript_57797.nnic	chr17	+	883	5	NIC	ENSG00000264538.7	novel	929	6	NA	NA	-134	0	intron_retention	FALSE	canonical	3	102	junction_1	126.040668040121	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	461	False	NA	14	True	AATATA	-18	NA	30709473	30770050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_30709812_30759490_30759540_30766502_30766589_30768833_30769065_30769871
transcript_57802.known	chr17	-	2873	8	FSM	ENSG00000176390.12	ENST00000324238.7	2873	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.6418390534633	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTACTTTTTTCTTC	16	True	NA	-8	True	AATAAA	-17	NA	30824692	30782683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
transcript_57805.known	chr17	+	418	1	FSM	ENSG00000242439.1	ENST00000490847.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCTGTAATGCTGTAA	19	False	NA	NA	False	NA	NA	NA	30830900	30831318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30830900_30831300
transcript_57809.nic	chr17	+	1838	2	ISM	ENSG00000176208.9	ENST00000578295.5	4051	15	-24	40922	-20	-34335	5prime_fragment	FALSE	canonical	3	72	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAATAAGAAAACAT	-41	True	NA	NA	False	AATAAA	-9	NA	30831945	30835517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_30832414_30834147
transcript_57810.known	chr17	+	6873	23	FSM	ENSG00000176208.9	ENST00000321990.5	6873	23	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	17.7056394807273	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAGATGTAATCATCT	-21	True	NA	28	True	ATTAAA	-37	NA	30831965	30895869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30832414_30834147_30836049_30837205_30837315_30840616_30840782_30843912_30844040_30844834_30844917_30855142_30855328_30856954_30857113_30858160_30858324_30860432_30860613_30865703_30865801_30868332_30868413_30869247_30869391_30869495_30869647_30876373_30876551_30877415_30877550_30878002_30878097_30879422_30879488_30887191_30887373_30892606_30892789_30893293_30894151_30894563_30894723_30894834
transcript_57814.nnic	chr17	-	1294	4	NNC	ENSG00000172171.11	novel	1306	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	55.874860178796	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-21	True	NA	-5	True	AATAAA	-13	NA	30906249	30898985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_30899607_30900412_30900563_30904065_30904530_30906190
transcript_57817.nnic	chr17	-	870	3	NIC	ENSG00000172171.11	novel	1306	4	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	58	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	490	False	NA	-5	True	AATAAA	-13	NA	30906266	30898985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_30899607_30900412_30900563_30906167
transcript_5782.nic	chr1	+	1671	14	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	21.9609659092818	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	-26	True	NA	8	True	AATAAA	-19	NA	59296782	59762724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59321535_59321751_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_57820.known	chr17	-	1306	4	FSM	ENSG00000172171.11	ENST00000581216.6	1306	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	8.80656320908194	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-10	True	NA	-5	True	AATAAA	-13	NA	30906238	30898985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30899607_30900412_30900563_30904065_30904530_30906167
transcript_57821.known	chr17	-	2109	3	FSM	ENSG00000172171.11	ENST00000580840.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-7	True	NA	-5	True	AATAAA	-13	NA	30906235	30898985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30900563_30904065_30904530_30906167
transcript_57822.known	chr17	-	1262	4	FSM	ENSG00000172171.11	ENST00000306049.9	1262	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	52.083266666624	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-7	True	NA	-5	True	AATAAA	-13	NA	30906235	30898985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30899607_30900412_30900522_30904065_30904530_30906167
transcript_57823.known	chr17	+	1598	11	FSM	ENSG00000184060.11	ENST00000580525.5	1598	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.51327459504216	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTTTAATCTG	16	False	NA	NA	False	AATGAA	-41	NA	30921931	30958220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30922109_30922939_30923071_30926808_30926919_30931888_30931969_30934184_30934298_30944906_30945054_30949286_30949371_30953287_30953351_30954477_30954556_30956240_30956470_30957834
transcript_57824.known	chr17	+	2669	11	FSM	ENSG00000184060.11	ENST00000330889.8	2669	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGTTTTGGATGATT	-4	True	NA	NA	False	GATAAA	-17	NA	30921944	30959322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30922109_30922939_30923071_30926826_30926919_30931888_30931969_30934184_30934298_30944906_30945054_30949286_30949371_30953287_30953351_30954477_30954556_30956240_30956470_30957834
transcript_57825.known	chr17	+	2054	5	FSM	ENSG00000181481.14	ENST00000328381.10	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	20.4006740084733	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGAGTTCTGTGAGT	-5	True	NA	21	True	AATAAA	-21	NA	30971038	30999911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30971446_30984616_30984761_30987943_30988107_30997241_30997332_30998661
transcript_57826.known	chr17	+	2265	14	FSM	ENSG00000196712.19	ENST00000487476.5	2265	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.42976873993968	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCAGTTGACTTTAAA	19	True	NA	NA	False	AATAAA	-17	NA	31094926	31219359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_31095370_31155982_31156127_31159009_31159094_31163185_31163377_31169890_31169998_31181421_31181490_31181709_31181786_31182507_31182666_31200421_31200596_31201036_31201160_31201410_31201486_31206239_31206372_31214450_31214586_31219004
transcript_57841.nnic	chr17	-	614	4	NNC	ENSG00000264107.1	novel	492	3	NA	NA	718	45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.25718035235908	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	NA	False	NA	NA	False	AATAAA	-32	NA	31094732	31090741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31090936_31091024_31091119_31093372_31093492_31094525
transcript_57843.nnic	chr17	-	489	4	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-363	45	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	6.79869268479038	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	NA	False	NA	NA	False	AATAAA	-32	NA	31095813	31090741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31090936_31091024_31091119_31093372_31093492_31095731
transcript_57847.nnic	chr17	-	364	3	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-357	45	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	8	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	NA	False	NA	NA	False	AATAAA	-32	NA	31095807	31090741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31090936_31091024_31091119_31095731
transcript_5785.nic	chr1	+	1605	14	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	17.1484986490701	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	-23	True	NA	8	True	AATAAA	-19	NA	59296785	59762724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_57850.nnic	chr17	-	578	3	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-363	45	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	6	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	NA	False	NA	NA	False	AATAAA	-32	NA	31095813	31090741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31091119_31093372_31093492_31095731
transcript_57852.known	chr17	-	492	3	FSM	ENSG00000264107.1	ENST00000583377.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAATAAATAAATG	NA	False	NA	NA	False	NA	NA	NA	31095450	31090786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_31090936_31093372_31093492_31095226
transcript_57858.known	chr17	-	1041	4	FSM	ENSG00000172301.11	ENST00000378634.6	1041	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	268.500775914459	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGCTTCGTCTGCTT	246	False	NA	-13	True	AATAAA	-16	NA	31859074	31851870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31858757
transcript_57859.known	chr17	-	868	4	FSM	ENSG00000172301.11	ENST00000302362.11	868	4	0	0	0	0	multi-exon	FALSE	canonical	2	450	junction_2	86.8498064988569	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGCTTCGTCTGCTT	-13	True	NA	-13	True	AATAAA	-16	NA	31859244	31851870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31859100
transcript_57861.known	chr17	-	4330	19	FSM	ENSG00000108651.10	ENST00000261708.9	4330	19	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	30.1205397292321	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTACTTTAGAACA	-3	True	NA	-29	True	ATTAAA	-13	NA	31901708	31860903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_57862.known	chr17	-	410	2	FSM	ENSG00000108651.10	ENST00000579459.1	410	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGGGTCTTGCTCTGTT	NA	False	NA	-8	True	ATTAAA	-16	NA	31868112	31863173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_31863517_31868045
transcript_57863.known	chr17	+	4495	16	FSM	ENSG00000178691.11	ENST00000322652.10	4495	16	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_4	36.8573225047917	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGTTTTGGGGTTTTT	-3	True	NA	21	True	TATAAA	-6	NA	31937006	32001038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_57864.known	chr17	+	3977	15	FSM	ENSG00000178691.11	ENST00000580398.1	3977	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	76.4131159272692	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTTAGGGGAGATGT	15	True	NA	NA	False	NA	NA	NA	31937066	32000649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_57868.known	chr17	+	3025	12	FSM	ENSG00000185158.12	ENST00000341671.11	3025	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	20.3518634799725	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTACTGAAGATTTGAC	34	False	NA	24	True	AATAAA	-37	NA	32021141	32053504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32022826_32024710_32024783_32027768_32027841_32030655_32030728_32031377_32031459_32034909_32034982_32035564_32035640_32045699_32045819_32047760_32047902_32049101_32049395_32050002_32050108_32053265
transcript_57873.known	chr17	+	393	2	FSM	ENSG00000185158.12	ENST00000581370.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCCGAAGCTTTGT	648	False	NA	13	True	AATAAA	-14	NA	32008035	32017220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32008133_32016924
transcript_57876.known	chr17	+	431	3	FSM	ENSG00000264164.1	ENST00000358484.4	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	12.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACACATGGACATAACTG	NA	False	NA	NA	False	AAGAAA	-17	NA	32083178	32096989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32083323_32095061_32095202_32096842
transcript_57881.nic	chr17	+	805	2	ISM	ENSG00000264164.1	ENST00000358484.4	431	3	-159	1426	-159	-1426	5prime_fragment	FALSE	canonical	3	111	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATAATCTTCCT	NA	False	NA	NA	False	CATAAA	-17	NA	32083019	32095563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_32083323_32095061
transcript_57885.nnic	chr17	+	1647	3	NNC	ENSG00000264164.1	novel	431	3	NA	NA	-119	15346	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	54.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACATTTCAACATGGCCAA	NA	False	NA	85	True	ATTAAA	-21	NA	32083059	32112411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_32083323_32095061_32095202_32111167
transcript_57888.known	chr17	+	860	1	FSM	ENSG00000277511.1	ENST00000613639.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTCATTTATTTAT	3	True	NA	NA	False	ATTAAA	-16	NA	32127594	32128454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32127600_32128500
transcript_57889.known	chr17	+	3289	21	FSM	ENSG00000126858.19	ENST00000583994.5	3289	21	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	115.210285999124	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	NA	False	NA	10	True	AATAAA	-20	NA	32142474	32225727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171042_32171102_32172936_32173061_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32224615
transcript_57890.known	chr17	+	3297	21	FSM	ENSG00000126858.19	ENST00000358365.7	3297	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	104.534731070587	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	NA	False	NA	10	True	AATAAA	-20	NA	32142465	32225727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32211115_32211239_32224615
transcript_57891.known	chr17	+	2960	20	FSM	ENSG00000126858.19	ENST00000394692.6	2960	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_19	83.5223857397979	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	102	False	NA	10	True	AATAAA	-20	NA	32142679	32225727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32224615
transcript_57892.known	chr17	+	3165	20	FSM	ENSG00000126858.19	ENST00000545287.7	3165	20	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_18	93.1850688882715	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	4	True	NA	10	True	AATAAA	-20	NA	32142501	32225727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32211115_32211239_32224615
transcript_57895.known	chr17	+	2919	19	FSM	ENSG00000126858.19	ENST00000354266.7	2919	19	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	84.4801094275386	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTCCATCATCAG	13	False	NA	24	True	AATAAA	-29	NA	32142559	32225666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171046_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
transcript_57917.known	chr17	+	2124	11	FSM	ENSG00000010244.19	ENST00000394673.6	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_8	169.709192444016	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTTTTTATTCATAAC	NA	False	NA	28	True	AATAAA	-15	NA	32350137	32370343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32367771_32368015_32369294_32369455_32369598
transcript_57918.known	chr17	-	776	7	FSM	ENSG00000108666.10	ENST00000583221.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	205.321495870906	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGACATTAACAGGTAAAG	8419	False	NA	NA	False	AAAACA	-4	NA	32342209	32334788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339925_32341203_32341285_32341999
transcript_57919.known	chr17	+	2283	11	FSM	ENSG00000010244.19	ENST00000321233.10	2283	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	398.5993602604	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATATCATTGGATTC	NA	False	NA	21	True	AATAAA	-22	NA	32350131	32370451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_5792.nnic	chr1	+	1454	13	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	20.894410470001	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	-24	True	NA	8	True	AATAAA	-19	NA	59296784	59762724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_57920.known	chr17	+	13740	12	FSM	ENSG00000010244.19	ENST00000394670.9	13740	12	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_8	262.148560493082	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTTGTCTGAGCCCAT	-5	True	NA	14	True	AATAAA	-20	NA	32350156	32381885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_57921.known	chr17	+	847	8	FSM	ENSG00000010244.19	ENST00000394679.9	847	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	398.694962934557	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCACCAACAGCAACTGTA	22	False	NA	NA	False	AATAGA	-5	NA	32350183	32365416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32350327_32351797_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329
transcript_57929.known	chr17	+	3850	14	FSM	ENSG00000108671.11	ENST00000261712.8	3850	14	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_5	139.509919903494	3689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCTTTTACTTGT	20	True	NA	NA	False	AATAAA	-19	NA	32444509	32483319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32480752
transcript_57930.known	chr17	+	670	2	FSM	ENSG00000108671.11	ENST00000585265.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	2042	junction_1	0	3166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATTATTCTAAAT	NA	False	NA	-25	True	AAAAAG	-11	NA	32480191	32480982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32480632_32480752
transcript_57931.known	chr17	-	3500	22	FSM	ENSG00000176658.17	ENST00000579584.5	3500	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	26.1232904484652	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGAAAATATGTCTG	0	True	NA	NA	False	AATAAA	-20	NA	32877144	32594202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_32594567_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
transcript_57932.known	chr17	-	927	2	FSM	ENSG00000265222.1	ENST00000578408.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACCTTCTCCTCCCAA	24	False	NA	NA	False	AATAAA	-19	NA	32523424	32509953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_32510853_32523396
transcript_57933.nnic	chr17	+	1018	4	Fusion	ENSG00000226377.2_ENSG00000236377.1	novel	3024	3	NA	NA	-33	2	multi-exon	FALSE	canonical	1	3	junction_1	1.88561808316413	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATGTGTGCATGTGTGT	NA	False	NA	NA	False	AATAAA	-24	NA	32876725	32906586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr17_+_32876894_32877843_32877962_32878299_32878636_32906190
transcript_57934.known	chr17	+	3024	3	FSM	ENSG00000226377.2	ENST00000435733.2	3024	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGAGATGAAGTGCTTA	NA	False	NA	NA	False	NA	NA	NA	32876758	32881070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32876894_32877843_32877962_32878299
transcript_57935.known	chr17	+	896	9	FSM	ENSG00000006042.12	ENST00000439138.5	896	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	343.725544584629	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGCAATTTAGTGCCT	31	True	NA	NA	False	GATAAA	-34	NA	32928209	32940978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32928238_32930899_32930972_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_57936.known	chr17	+	4218	8	FSM	ENSG00000006042.12	ENST00000579849.6	4218	8	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_1	89.5975127205788	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGGAAGAGGGTT	-26	True	NA	NA	False	AATAAA	-13	NA	32928152	32944315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_57942.known	chr17	+	1683	7	FSM	ENSG00000006042.12	ENST00000394642.7	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	254.11398361103	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	24	False	NA	-4	True	NA	NA	NA	32927909	32941613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32928238_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_57946.nnic	chr17	+	1256	6	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	308.830309393362	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	-27	True	NA	-4	True	NA	NA	NA	32928151	32941613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_32928238_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_57947.nnic	chr17	+	1123	5	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	348.219399229853	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	-26	True	NA	-4	True	NA	NA	NA	32928152	32941613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_32928238_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_57954.nnic	chr17	+	493	2	Genic_Genomic	ENSG00000265689.1	novel	372	1	NA	NA	-105863	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGCTTGTTTACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	33582939	33689174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr17_+_33583108_33688849
transcript_57957.known	chr17	+	3810	4	FSM	ENSG00000263571.3	ENST00000583224.3	3810	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	13.0724477007517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCACTATTAATACCAC	NA	False	NA	NA	False	AATAAA	-11	NA	34155565	34165736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34156703_34159042_34159116_34161424_34161900_34163611
transcript_57959.nnic	chr17	+	1470	4	NNC	ENSG00000263571.3	novel	3810	4	NA	NA	2238	-1472	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	13.5973853695808	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGGGGAAAAGGAGAAA	NA	False	NA	NA	False	AATAAA	-17	NA	34157851	34164264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_34158121_34159042_34159116_34161424_34161900_34163611
transcript_57962.known	chr17	+	1937	3	FSM	ENSG00000263571.3	ENST00000667899.1	1937	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	7.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	34155613	34162199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34156703_34159042_34159116_34161424
transcript_57963.nnic	chr17	+	2002	3	NNC	ENSG00000263571.3	novel	3810	4	NA	NA	1353	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	12	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	NA	False	NA	NA	False	NA	NA	NA	34156966	34162199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_34158121_34159042_34159116_34161424
transcript_57970.nnic	chr17	+	758	3	Antisense	novelGene_ENSG00000261156.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	8	True	AATAAA	-22	NA	34178367	34183585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_34178545_34182496_34182645_34183152
transcript_57972.nnic	chr17	-	420	3	NNC	ENSG00000261156.6	novel	306	3	NA	NA	-1356	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1.5	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTTGAGGACATTTT	NA	False	NA	2	True	AATAAA	-20	NA	34184988	34169371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_34169560_34183755_34183882_34184882
transcript_57980.known	chr17	+	996	1	FSM	ENSG00000108691.9	ENST00000582017.1	996	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	420	False	NA	22	True	AATAAA	-18	NA	34256207	34257203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34256200_34257200
transcript_57981.known	chr17	+	741	3	FSM	ENSG00000108691.9	ENST00000225831.4	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_2	17	3958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	1	True	NA	22	True	AATAAA	-18	NA	34255284	34257203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34255426_34256221_34256340_34256721
transcript_57983.known	chr17	+	8382	20	FSM	ENSG00000005156.12	ENST00000378526.9	8382	20	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	29.29768882757	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAGGAGGGAAACTGA	-20	True	NA	NA	False	NA	NA	NA	34980511	35009743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_57988.known	chr17	-	1847	14	FSM	ENSG00000132141.14	ENST00000314144.10	1847	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	3.96881333523521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAATATTTAAATATTT	-3	True	NA	60	True	AATAAA	-16	NA	34961460	34927860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34958559_34958695_34959586_34959651_34961256
transcript_57990.known	chr17	-	1639	13	FSM	ENSG00000132141.14	ENST00000436961.7	1639	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	4.17249592237335	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCTTAATAGTCTC	-1	True	NA	-11	True	AATAAA	-14	NA	34961458	34927931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34959586_34959651_34961256
transcript_57994.known	chr17	-	7210	7	FSM	ENSG00000092871.17	ENST00000394597.7	7210	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	35.7382459309662	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	-12	True	NA	NA	False	ATTAAA	-20	NA	35063707	35005989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35063575
transcript_58.known	ERCC-00137	+	521	1	FSM	ERCC-00137A	DQ855000	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00137_+_0_500
transcript_58002.nnic	chr17	+	559	2	NNC	ENSG00000198783.6	novel	667	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCTCTTAGTGTGCTT	-17	True	NA	20	True	CATAAA	-23	NA	34961539	34963186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_34961936_34963023
transcript_58003.known	chr17	+	667	2	FSM	ENSG00000198783.6	ENST00000578339.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCTCTTAGTGTGCTT	808	False	NA	20	True	CATAAA	-23	NA	34962364	34963186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34962869_34963023
transcript_58004.known	chr17	+	271	1	FSM	ENSG00000243423.1	ENST00000479840.1	271	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTTCAACAATTAGTAAC	NA	False	NA	NA	False	NA	NA	NA	35076736	35077007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35076700_35077000
transcript_58005.known	chr17	+	3055	20	FSM	ENSG00000005156.12	ENST00000262327.9	3055	20	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_19	78.7123871394883	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAAGCAGGTCCAGCAA	14	True	NA	NA	False	NA	NA	NA	34980545	35003172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35002994
transcript_58008.known	chr17	-	9966	10	FSM	ENSG00000185379.21	ENST00000345365.11	9966	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	19.9078122267195	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCTATAAATATGTCA	-17	True	NA	NA	False	AATAAA	-17	NA	35119860	35092220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35118500_35118620_35119110_35119173_35119531
transcript_58012.known	chr17	-	1571	9	FSM	ENSG00000185379.21	ENST00000586044.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	16.0058583025091	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	3	True	NA	-12	True	TATAAA	-15	NA	35119746	35100382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35119110_35119173_35119531
transcript_58014.known	chr17	-	1064	9	FSM	ENSG00000185379.21	ENST00000460118.6	1064	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	25.7436278523444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATCTTGGGTTCCTTGGC	5	True	NA	NA	False	NA	NA	NA	35119744	35100826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107062_35107365_35107448_35119110_35119173_35119531
transcript_58019.known	chr17	-	1409	8	FSM	ENSG00000185379.21	ENST00000588594.5	1409	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	25.4822867650356	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	1791	False	NA	-12	True	TATAAA	-15	NA	35119719	35100382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35107365_35107448_35119110_35119173_35119531
transcript_58020.known	chr17	-	1353	7	FSM	ENSG00000185379.21	ENST00000335858.11	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	20.5946325261921	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	4	True	NA	-12	True	TATAAA	-15	NA	35119745	35100382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35119110_35119173_35119531
transcript_58028.known	chr17	-	5193	13	FSM	ENSG00000073536.18	ENST00000442241.9	5193	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_12	27.1890245421853	379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCCCAACCGGATCC	-9	True	NA	11	True	AATAAA	-39	NA	35142303	35128729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_58034.known	chr17	+	10555	5	FSM	ENSG00000166750.10	ENST00000299977.9	10555	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.67423461417477	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTCTTCTTTCTTCT	-1	True	NA	NA	False	AATAAA	-24	NA	35243071	35273655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35243144_35258650_35259703_35260970_35261097_35264182_35264904_35265071
transcript_58037.known	chr17	+	1225	2	FSM	ENSG00000166750.10	ENST00000592325.1	1225	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAATTGTCTGACTTAT	16	False	NA	NA	False	NA	NA	NA	35243088	35259820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35243144_35258650
transcript_58038.known	chr17	+	718	5	FSM	ENSG00000267364.3	ENST00000591886.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.04152298679729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	0	True	NA	NA	False	ATTAAA	-21	NA	35313625	35324909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35316355_35316410_35321734_35321866_35323147_35323344_35324653
transcript_58041.known	chr17	+	1088	4	FSM	ENSG00000267364.3	ENST00000664542.1	1088	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.68331255192114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTACTCCATTTTCCAT	-13	True	NA	NA	False	GATAAA	-12	NA	35313505	35325296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35321734_35321866_35323147_35323261_35324653
transcript_58043.known	chr17	+	1343	4	FSM	ENSG00000267364.3	ENST00000664469.1	1343	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	2.05480466765633	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	-4	True	NA	20	True	AATATA	-31	NA	35313485	35325448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35321734_35321866_35323147_35323344_35324653
transcript_58046.nic	chr17	+	661	4	FSM	ENSG00000267364.3	ENST00000690246.1	646	4	-15	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.49691252107735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	2	True	NA	NA	False	ATTAAA	-21	NA	35313491	35324909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313645_35321734_35321866_35323147_35323269_35324653
transcript_58047.known	chr17	+	1271	4	FSM	ENSG00000267364.3	ENST00000657419.1	1271	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.24933858267454	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	6	True	NA	20	True	AATATA	-31	NA	35313495	35325448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313645_35321734_35321866_35323147_35323344_35324653
transcript_58049.known	chr17	+	1140	3	FSM	ENSG00000267364.3	ENST00000669048.1	1140	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	6	True	NA	20	True	AATATA	-31	NA	35313495	35325448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313645_35323147_35323344_35324653
transcript_58051.known	chr17	+	1116	3	FSM	ENSG00000267364.3	ENST00000659130.2	1167	3	51	0	1	0	multi-exon	FALSE	canonical	2	4	junction_1	3	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTTATTTCCAGGTT	-11	True	NA	21	True	AATATA	-32	NA	35313507	35325449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35323147_35323269_35324653
transcript_58053.known	chr17	+	1219	3	FSM	ENSG00000267364.3	ENST00000662865.1	1219	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	-11	True	NA	20	True	AATATA	-31	NA	35313478	35325448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35323147_35323344_35324653
transcript_58055.nic	chr17	+	848	2	ISM	ENSG00000267364.3	ENST00000664542.1	1088	4	-24	2939	0	-2552	5prime_fragment	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCATTGCTTTGTGCAT	-8	True	NA	NA	False	AATAAA	-11	NA	35313481	35322357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35313707_35321734
transcript_58056.known	chr17	+	764	4	FSM	ENSG00000267364.3	ENST00000585387.2	764	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.71547606649408	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	5	True	NA	NA	False	ATTAAA	-21	NA	35313523	35324909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35321736_35321866_35323147_35323344_35324653
transcript_58057.known	chr17	+	526	3	FSM	ENSG00000267364.3	ENST00000663051.2	540	3	14	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	6	True	NA	NA	False	ATTAAA	-21	NA	35313495	35324909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313645_35323147_35323269_35324653
transcript_58058.known	chr17	-	2506	4	FSM	ENSG00000172123.13	ENST00000304905.10	2506	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_3	5.09901951359278	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAAAACAAAACTCCA	4	True	NA	NA	False	AATGAA	-19	NA	35432500	35410921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432187
transcript_58061.known	chr17	-	2423	4	FSM	ENSG00000172123.13	ENST00000452764.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.34846922834953	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGGGAAAATTGCAACAC	NA	False	NA	-11	True	AATAAA	-17	NA	35433283	35411070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432904
transcript_58065.known	chr17	-	6004	7	FSM	ENSG00000154760.14	ENST00000526861.5	6004	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	37.5218454888467	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTTCACGAATTAA	-7	True	NA	NA	False	NA	NA	NA	35448782	35437542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35446716_35446754_35447267_35447415_35448721
transcript_58067.known	chr17	-	8398	6	FSM	ENSG00000154760.14	ENST00000285013.11	8398	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	23.2155120555201	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTTTTTACTCTGC	9	True	NA	0	True	AATAAA	-19	NA	35448766	35435095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35447267_35447415_35448721
transcript_58071.nic	chr17	-	1435	3	NIC	ENSG00000154760.14	novel	6004	7	NA	NA	-13	-147	intron_retention	FALSE	canonical	3	24	junction_1	41	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAGAAAAAAGCTACAGA	911	False	NA	NA	False	NA	NA	NA	35448850	35445594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_35446754_35447267_35447415_35448721
transcript_58075.known	chr17	-	463	2	FSM	ENSG00000154760.14	ENST00000526483.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAAGATTTAACTTTG	20	True	NA	NA	False	AATAAA	-15	NA	35448755	35446985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35447415_35448721
transcript_58076.known	chr17	+	5700	22	FSM	ENSG00000006125.18	ENST00000610402.5	5700	22	0	0	0	0	multi-exon	TRUE	canonical	2	100	junction_14	63.8072494264177	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	10	True	NA	NA	False	AATAAA	-18	NA	35587321	35726413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_58079.known	chr17	+	5702	21	FSM	ENSG00000006125.18	ENST00000621914.4	5702	21	0	0	0	0	multi-exon	FALSE	canonical	2	181	junction_14	40.1239018541318	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAGTTTGTGGTATG	-38	True	NA	NA	False	AATAAA	-14	NA	35587273	35726409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_58080.nic	chr17	+	2553	15	NIC	ENSG00000006125.18	novel	2161	15	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_14	73.5477076877482	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	8491	False	NA	19	True	AATAAA	-24	NA	35587244	35660120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
transcript_58081.nic	chr17	+	2611	15	NIC	ENSG00000006125.18	novel	2285	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	47	junction_14	90.0899776980362	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	44	True	NA	19	True	AATAAA	-24	NA	35587355	35660120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_35587598_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
transcript_58087.known	chr17	+	2542	14	FSM	ENSG00000006125.18	ENST00000616784.4	2542	14	0	0	0	0	multi-exon	FALSE	canonical	2	221	junction_9	37.4092985940899	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATCTTTCTTCCCTT	8145	False	NA	NA	False	NA	NA	NA	35586898	35657791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598
transcript_58088.nic	chr17	+	351	3	ISM	ENSG00000006125.18	ENST00000588093.1	334	4	-175	2759	-11	-2707	5prime_fragment	FALSE	canonical	3	74	junction_1	108	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGGAGGCTGTGAAGA	44	True	NA	NA	False	ACTAAA	-31	NA	35587355	35598278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35587598_35594007_35594068_35598229
transcript_5809.nic	chr1	+	843	6	NIC	ENSG00000172456.18	novel	681	5	NA	NA	-12	78273	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	16.2308348522188	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGGAGGATCTTGATGG	-26	True	NA	NA	False	AATAAA	-22	NA	59296782	59457110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960
transcript_58092.nic	chr17	+	1688	2	ISM	ENSG00000006125.18	ENST00000590538.5	568	6	-19	12596	-11	-5416	5prime_fragment	FALSE	canonical	3	234	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCCAGATTATTTTAAT	-9	True	NA	NA	False	ATTAAA	-7	NA	35587302	35595569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35587429_35594007
transcript_58094.nic	chr17	+	354	2	ISM	ENSG00000006125.18	ENST00000592167.5	461	5	-197	11700	2	-6919	5prime_fragment	FALSE	canonical	3	8	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGTATGAGAATACAAT	57	False	NA	NA	False	AATAAA	-4	NA	35587368	35594066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35587664_35594007
transcript_58095.known	chr17	+	690	3	FSM	ENSG00000006125.18	ENST00000587805.1	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	149.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	NA	False	NA	19	True	AATAAA	-24	NA	35650649	35660120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35650790_35657598_35657792_35659763
transcript_58096.known	chr17	+	1504	3	FSM	ENSG00000267321.4	ENST00000638682.1	1504	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTACAAAATCATAACATAG	0	True	NA	NA	False	AATGAA	-37	NA	35568108	35574843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35568502_35573579_35573724_35573876
transcript_58097.known	chr17	-	1604	3	FSM	ENSG00000108733.11	ENST00000586663.2	1604	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAAGGGAATCATGT	-4	True	NA	NA	False	ATTAAA	-15	NA	35578552	35575788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35576182_35577037_35577592_35577895
transcript_58098.known	chr17	+	1298	2	FSM	ENSG00000267321.4	ENST00000592381.1	1298	2	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	0	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGTCTGAATGAAAAATT	11	True	NA	NA	False	TATAAA	-20	NA	35568119	35574792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35568502_35573876
transcript_5810.nnic	chr1	+	734	6	NNC	ENSG00000172456.18	novel	623	3	NA	NA	-6858	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26.9265668067803	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	NA	False	NA	8	True	AATAAA	-19	NA	59653360	59762724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_59653520_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_58109.known	chr17	+	2140	16	FSM	ENSG00000270647.7	ENST00000604841.5	2140	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	15.9114214743163	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	6	True	NA	38	True	AATAAA	-20	NA	35809488	35847234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
transcript_58110.known	chr17	+	808	10	ISM	ENSG00000270647.7	ENST00000604841.5	2140	16	-8	11048	-1	2245	5prime_fragment	FALSE	canonical	3	8	junction_4	7.39536057435277	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGTGTCTACAGATCAAG	-2	True	NA	NA	False	NA	NA	NA	35809480	35836186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131
transcript_58111.known	chr17	+	1041	3	FSM	ENSG00000270806.2	ENST00000605587.2	1041	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTGAGGTGGCGCAGG	-6	True	NA	NA	False	AATAAA	-20	NA	35760886	35765079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35760955_35764006_35764326_35764425
transcript_58112.nnic	chr17	-	315	2	NNC	ENSG00000271392.1	novel	480	2	NA	NA	-6420	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGTCTATTTTTTATTT	NA	False	NA	NA	False	TATAAA	-20	NA	35764745	35757200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_35757450_35764679
transcript_58113.nnic	chr17	+	988	5	Fusion	ENSG00000270240.2_ENSG00000270647.7	novel	4497	8	NA	NA	-377	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGTGAATCATCCTT	28	False	NA	NA	False	AATAAA	-18	NA	35844557	35885863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr17_+_35845039_35884381_35884536_35884666_35884780_35885530_35885613_35885705
transcript_58114.known	chr17	-	1163	7	FSM	ENSG00000278023.7	ENST00000620284.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	22.6764684689266	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	1	True	NA	-19	True	AATAAA	-16	NA	35930773	35918079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_58116.known	chr17	-	1032	6	FSM	ENSG00000278023.7	ENST00000616596.4	1032	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	33.3142612104786	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGAGGCGGGGCCGCGG	47	False	NA	-5	True	AATAAA	-30	NA	35930727	35918065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_58118.nnic	chr17	-	1009	6	NNC	ENSG00000278023.7	novel	779	5	NA	NA	-18	1084	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	31.7389350798038	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTCAGAAGCTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	35930791	35921070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_35921349_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_58119.known	chr17	-	506	5	FSM	ENSG00000278023.7	ENST00000619368.4	506	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	16.5736990439672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTGAATATCCCAAGG	47	False	NA	NA	False	NA	NA	NA	35930727	35918341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35925514_35925638_35930631
transcript_58121.known	chr17	-	587	5	FSM	ENSG00000278023.7	ENST00000615288.4	587	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.5333751520442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTGAATATCCCAAGG	47	False	NA	NA	False	NA	NA	NA	35930727	35918341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35925514_35925638_35930075_35930256_35930631
transcript_58125.known	chr17	-	779	5	FSM	ENSG00000278023.7	ENST00000613308.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	11.9032558571174	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTATGCTTTCATT	10	True	NA	-4	True	AATAAA	-20	NA	35930740	35922477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_58127.nic	chr17	-	658	4	ISM	ENSG00000278023.7	ENST00000619193.4	686	6	-64	4139	-18	0	5prime_fragment	FALSE	canonical	3	6	junction_1	38.6810318143431	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCTATAGTATGCTTTC	NA	False	NA	-7	True	AATAAA	-44	NA	35930791	35922480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_35922676_35925514_35925638_35930075_35930256_35930631
transcript_58128.known	chr17	-	1535	6	FSM	ENSG00000278023.7	ENST00000619262.4	1535	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	23.2843294943187	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	5	True	NA	-19	True	AATAAA	-16	NA	35930769	35918079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075
transcript_58129.known	chr17	-	588	4	FSM	ENSG00000275718.2	ENST00000617897.2	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGCTGAGCCCCAACA	0	True	NA	NA	False	AATAAA	-17	NA	36001553	35997581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35997861_35998279_35998392_35998865_35998926_36001416
transcript_5813.known	chr1	+	333	4	FSM	ENSG00000172456.18	ENST00000472783.5	333	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.7210060089875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGAAGGAGTATTTGG	15	False	NA	NA	False	AAGAAA	-27	NA	59673656	59762544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_59673791_59674038_59674134_59757930_59757993_59762502
transcript_58131.known	chr17	-	1458	2	FSM	ENSG00000276085.1	ENST00000612839.1	1458	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATTGAGTTTGGTTTT	2385	False	NA	0	True	AATAAA	-22	NA	36196747	36194868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_36195377_36195797
transcript_58133.known	chr17	-	3931	26	FSM	ENSG00000278259.5	ENST00000614623.5	3931	26	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_14	31.3591836628443	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGAATGTCAAGTTTT	-10	True	NA	-2	True	AGTAAA	-15	NA	36534868	36495635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_58146.known	chr17	-	1640	11	FSM	ENSG00000278259.5	ENST00000621344.4	1640	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_4	12.879829191414	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-10	True	NA	-26	True	ATTAAA	-21	NA	36534868	36513085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_5815.known	chr1	+	5713	22	FSM	ENSG00000134709.13	ENST00000371208.5	5713	22	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_19	19.8124997764616	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAGTTGTGAAATGAT	-17	True	NA	-45	True	AATAAA	-18	NA	59814948	59876322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314_59848517_59849072_59849184_59858427_59858516_59858984_59859046_59860187_59860329_59862783_59862878_59864631_59864667_59865162_59865246_59865871_59865973_59868249_59868352_59871041_59871111_59872794
transcript_58155.known	chr17	+	926	4	FSM	ENSG00000273611.5	ENST00000619730.4	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	306.805403400194	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCTTTTTAAAGGA	NA	False	NA	82	True	AATAAA	-22	NA	36486628	36495823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36495222
transcript_58157.known	chr17	+	567	4	FSM	ENSG00000273611.5	ENST00000622312.4	567	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	351.220095603249	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCTAAAGCCTTGGTTC	9	True	NA	NA	False	NA	NA	NA	36486693	36497917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36492817_36492900_36493925_36494007_36497605
transcript_58163.known	chr17	+	876	2	FSM	ENSG00000277161.2	ENST00000619326.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCACTGAAGAGGTTAA	11	True	NA	NA	False	NA	NA	NA	36535019	36537934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36535055_36537093
transcript_58166.known	chr17	+	2264	2	FSM	ENSG00000277161.2	ENST00000620233.1	2264	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATACTTGTTTATTG	27	True	NA	39	True	TATAAA	-40	NA	36535554	36539310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36535602_36537093
transcript_58167.known	chr17	+	2816	2	FSM	ENSG00000277161.2	ENST00000614443.2	2816	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGATTGTCAATACTTG	-22	True	NA	32	True	AATAAA	-39	NA	36534986	36539303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36535593_36537093
transcript_58168.known	chr17	+	834	5	FSM	ENSG00000273611.5	ENST00000620324.4	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	313.088246345978	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGTTAGGGATGGATC	10	True	NA	36	True	NA	NA	NA	36486694	36498148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36497605
transcript_58169.known	chr17	+	881	5	FSM	ENSG00000273611.5	ENST00000620863.4	881	5	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_2	319.905747838328	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	15	True	NA	81	True	AATAAA	-21	NA	36486699	36495822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36486934_36486967_36492817_36492900_36493925_36494007_36495222
transcript_5817.nic	chr1	+	1282	11	ISM	ENSG00000134709.13	ENST00000686716.1	3756	15	-113	13998	-30	13101	5prime_fragment	FALSE	canonical	3	167	junction_4	15.7098695093244	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCTTAGAAGAAGAATTAAAA	-7	True	NA	-1	True	AATACA	-5	NA	59814901	59848451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314
transcript_58170.known	chr17	+	2816	14	FSM	ENSG00000278311.5	ENST00000613102.5	2816	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	62.253632768694	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	-16	True	NA	NA	False	AATAAA	-28	NA	36544918	36589848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
transcript_58174.nic	chr17	+	1906	12	ISM	ENSG00000278311.5	ENST00000613102.5	2816	14	-25	3695	-18	0	5prime_fragment	TRUE	canonical	3	94	junction_1	66.657010319946	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAAAG	4591	False	NA	NA	False	NA	NA	NA	36544893	36586153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049
transcript_58176.known	chr17	+	2346	10	FSM	ENSG00000278311.5	ENST00000618837.4	2346	10	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	69.6506272516135	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAAAGCAAGA	-3	True	NA	NA	False	AATAAA	-3	NA	36544931	36586158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299
transcript_58184.known	chr17	+	2315	2	FSM	ENSG00000278311.5	ENST00000611219.1	2315	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATATCTCAAAATAAC	-23	True	NA	NA	False	AATAAA	-17	NA	36544911	36547747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36545098_36545618
transcript_58185.known	chr17	+	695	4	FSM	ENSG00000278311.5	ENST00000616019.1	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	20.0166597280032	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGATGTCAGTTGCA	466	False	NA	NA	False	AAAAAG	-8	NA	36545503	36560818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772
transcript_58186.known	chr17	+	1515	7	FSM	ENSG00000278535.5	ENST00000618403.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	51.4805788623244	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTGGCTTCAGGAGT	-7	True	NA	16	True	ATTAAA	-20	NA	36591878	36600804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36592157_36594970_36595181_36598162_36598258_36598920_36599051_36599670_36599764_36599971_36600038_36600161
transcript_58188.nnic	chr17	+	675	3	NNC	ENSG00000278535.5	novel	926	5	NA	NA	664	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCTGAGTCTATTAG	693	False	NA	12	True	ATTAAA	-25	NA	36592578	36597013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_36592858_36594970_36595181_36596827
transcript_58189.known	chr17	+	1839	5	FSM	ENSG00000278619.5	ENST00000614766.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_1	8.61321658847611	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	-34	True	NA	13	True	AATAAA	-14	NA	36601582	36608964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36602353_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_5819.known	chr1	-	1879	9	FSM	ENSG00000134716.11	ENST00000371204.4	1879	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.97647022494766	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTCCTTCCTGCTTC	-21	True	NA	1	True	CATAAA	-26	NA	59926773	59893307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_59893830_59900964_59901104_59904870_59905059_59907785_59907928_59909783_59909961_59911607_59911769_59912161_59912312_59915937_59916101_59926536
transcript_58190.known	chr17	+	1284	5	FSM	ENSG00000278619.5	ENST00000612760.1	1284	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	24.3823706804732	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	345	False	NA	13	True	AATAAA	-14	NA	36601961	36608964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36602177_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_58198.known	chr17	+	601	3	FSM	ENSG00000275613.2	ENST00000610398.2	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTTTTGTGGTTTTGA	5017	False	NA	NA	False	AAGAAA	-39	NA	36722442	36726346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36722809_36725347_36725381_36726144
transcript_5820.known	chr1	-	1667	8	FSM	ENSG00000134716.11	ENST00000466095.5	1667	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.34248118673448	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCTATAGTGTGCCT	-9	True	NA	-11	True	CATAAA	-14	NA	59926761	59893319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_59893830_59900964_59901104_59907785_59907928_59909783_59909961_59911607_59911769_59912161_59912312_59915937_59916101_59926536
transcript_58200.nnic	chr17	-	466	2	NNC	ENSG00000277268.2	novel	490	3	NA	NA	70783	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTCGTGTGGCTGTTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	36862460	36861673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_36861963_36862283
transcript_58206.known	chr17	+	2007	12	FSM	ENSG00000275700.6	ENST00000679997.1	2007	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	238.254430291902	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGCTTGTGATTTCTTA	28	True	NA	18	True	AATAAA	-18	NA	36949007	37056871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031690_37056605
transcript_58208.known	chr17	+	2018	11	FSM	ENSG00000275700.6	ENST00000680340.1	2018	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_10	225.077431120937	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCTTGTGATTTCTT	6718	False	NA	17	True	AATAAA	-17	NA	36948924	37056870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37056600
transcript_5821.known	chr1	-	2028	12	FSM	ENSG00000162598.13	ENST00000371201.3	2028	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.49378879319591	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTGATTTTTTCCTAC	-8	True	NA	NA	False	AATAAA	-18	NA	60073770	59990393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_59990834_59997608_59997817_60001076_60001157_60010391_60010457_60025400_60025499_60033475_60033642_60037991_60038108_60039916_60040181_60040990_60041132_60055203_60055439_60072536_60072671_60073689
transcript_58210.known	chr17	+	1963	11	FSM	ENSG00000275700.6	ENST00000680579.1	1963	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	253.147407650167	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	6718	False	NA	5	True	AATAAA	-5	NA	36948924	37056858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_58211.known	chr17	+	1940	11	FSM	ENSG00000275700.6	ENST00000616434.2	1940	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	248.67892954571	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	6718	False	NA	5	True	AATAAA	-5	NA	36948924	37056858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_58219.known	chr17	+	2712	11	FSM	ENSG00000275700.6	ENST00000679881.1	2712	11	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_1	58.634119759744	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACCGCCACCACCGCTT	310	False	NA	7	True	AATAAA	-7	NA	36949289	37056860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_5822.known	chr1	-	1321	4	FSM	ENSG00000226476.7	ENST00000668078.1	1321	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTAGTTTATGGTAATT	NA	False	NA	NA	False	AATAAA	-15	NA	60640489	60595510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_60596374_60600126_60600251_60640010_60640127_60640271
transcript_58229.known	chr17	-	569	2	FSM	ENSG00000278540.5	ENST00000614438.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	NA	False	NA	1	True	AATAAA	-24	NA	37330399	37328644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37328987_37330172
transcript_5823.known	chr1	-	1360	4	FSM	ENSG00000226476.7	ENST00000663215.1	1360	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAGTTTATGGTAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	60640507	60595509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_60596374_60600126_60600271_60640010_60640127_60640271
transcript_58230.known	chr17	-	10013	56	FSM	ENSG00000278540.5	ENST00000616317.5	10013	56	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	68.2754363340987	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAGTTTGTCATTTCAA	-6	True	NA	-21	True	AATAAA	-20	NA	37406836	37084991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37087440_37088937_37089075_37096995_37097167_37097829_37097985_37111530_37111644_37113087_37113266_37121354_37121491_37122530_37122628_37125697_37125795_37129364_37129486_37130074_37130219_37149863_37149975_37151300_37151422_37155682_37155781_37161780_37162051_37179259_37179407_37181200_37181357_37188276_37188481_37191119_37191276_37192089_37192306_37193373_37193416_37200138_37200184_37200426_37200484_37205764_37205873_37206782_37206880_37207656_37207801_37210466_37210491_37221723_37221843_37223511_37223602_37224991_37225106_37226338_37226453_37234974_37235100_37240475_37240565_37241952_37242054_37243370_37243560_37244587_37244735_37245079_37245215_37246825_37246977_37248010_37248157_37248592_37248675_37252004_37252109_37252885_37253037_37257702_37257867_37258211_37258374_37259359_37259531_37263684_37263895_37270750_37270862_37274192_37274300_37275950_37276050_37277032_37277115_37277895_37278006_37283266_37283406_37284837_37284971_37330172_37330426_37339803_37339851_37406261
transcript_58235.known	chr17	+	2211	17	FSM	ENSG00000276234.5	ENST00000620628.4	2211	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	17.0733710789639	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	-14	True	NA	24	True	ATTAAA	-17	NA	37406889	37478267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477491_37478053
transcript_58237.nic	chr17	+	2320	17	NIC	ENSG00000276234.5	novel	2211	17	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_16	17.0733710789639	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	-20	True	NA	24	True	ATTAAA	-17	NA	37406883	37478267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477566_37478025
transcript_58239.known	chr17	+	4236	16	FSM	ENSG00000276234.5	ENST00000615182.5	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.22030007562579	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGACTCTTCTCTGTG	-18	True	NA	5	True	AATAAA	-18	NA	37406885	37479725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_58248.known	chr17	+	1043	11	FSM	ENSG00000276234.5	ENST00000620367.4	1043	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	6.13921819126833	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTCCCCTTTATTAC	35	False	NA	NA	False	AATAAA	-17	NA	37406938	37465653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430
transcript_58270.known	chr17	+	1948	16	FSM	ENSG00000276234.5	ENST00000612272.4	1948	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	15.9284511348579	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCCTAACACCTCTTG	-12	True	NA	5	True	ATTAAA	-13	NA	37407223	37477228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37407497_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_58271.known	chr17	+	1474	3	FSM	ENSG00000276023.5	ENST00000617516.5	1474	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	20.5	505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	-1	True	NA	NA	False	AATAAA	-18	NA	37489890	37513498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37489959_37510676_37510765_37512180
transcript_58274.nic	chr17	-	486	5	ISM	ENSG00000275066.5	ENST00000619976.1	1375	10	57	13509	0	0	5prime_fragment	FALSE	canonical	3	92	junction_3	10.8714074525794	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGTGAAACCCAAGGTA	18	True	NA	60	True	AAAAAG	-42	NA	37609381	37585341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_58275.known	chr17	-	485	5	FSM	ENSG00000275066.5	ENST00000620424.1	485	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.9818717136523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTGTGAAACCCAAGGTA	2483	False	NA	60	True	AAAAAG	-42	NA	37609472	37585341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37585431_37586418_37586550_37596222_37596342_37600362_37600404_37609367
transcript_58277.known	chr17	-	8141	22	FSM	ENSG00000275066.5	ENST00000612223.5	8141	22	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_16	15.8532098654673	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGCTACTAAGCCTTT	-19	True	NA	-19	True	AATACA	-13	NA	37609418	37514806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_58278.known	chr17	-	6383	15	FSM	ENSG00000278053.5	ENST00000617633.5	6383	15	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_12	53.7297185276568	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGACTCAGCCTACTCTT	-7	True	NA	-2	True	AATAAA	-35	NA	37643446	37609738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_58282.nic	chr17	-	1744	13	ISM	ENSG00000278053.5	ENST00000617633.5	6383	15	-69	10029	-69	0	5prime_fragment	FALSE	canonical	3	342	junction_10	51.631910352675	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAATCTTGAATTTACCT	12	False	NA	-1	True	CATAAA	-22	NA	37643515	37619767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_58284.nic	chr17	-	363	2	ISM	ENSG00000278053.5	ENST00000613633.1	776	6	-82	15302	-69	-11319	5prime_fragment	FALSE	canonical	3	550	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACGATGACTTCAGGT	12	False	NA	61	True	AAGAAA	-5	NA	37643515	37642127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_37642309_37643333
transcript_58285.known	chr17	-	1971	9	FSM	ENSG00000275410.6	ENST00000621123.4	1971	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	9.25928587959136	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTATTGCCACAATGCCT	1	True	NA	NA	False	NA	NA	NA	37745059	37687171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37687393_37699075_37699195_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733744_37739439_37739640_37744540
transcript_58287.known	chr17	-	2790	9	FSM	ENSG00000275410.6	ENST00000617811.5	2790	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	5.25446238924593	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTCATATTTCTG	1	True	NA	-5	True	ATTAAA	-20	NA	37745059	37686430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37687393_37699075_37699195_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733822_37739439_37739640_37744540
transcript_58288.known	chr17	-	1819	8	FSM	ENSG00000275410.6	ENST00000614313.4	1819	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.4103219459444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACGTCCTGCTGGCACCTC	71	False	NA	NA	False	NA	NA	NA	37745018	37687241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37687393_37700982_37701178_37704916_37705050_37710502_37710664_37731594_37731831_37733556_37733822_37739439_37739640_37744540
transcript_58295.known	chr17	-	1479	12	FSM	ENSG00000274487.3	ENST00000620148.2	1479	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	149.641279053255	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGCTTGAGATAGAAAT	193	False	NA	NA	False	NA	NA	NA	38257152	38195871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202735_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
transcript_58296.known	chr17	-	1643	12	FSM	ENSG00000274487.3	ENST00000649858.2	1815	12	172	0	2	0	multi-exon	FALSE	canonical	1	2	junction_9	145.769488582669	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAATCTGAAACTTTT	153	False	NA	NA	False	NA	NA	NA	38257192	38195702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
transcript_58312.known	chr17	+	1553	8	FSM	ENSG00000278845.5	ENST00000613675.5	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	34.6221587650311	2998	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTAGCCTTTGATTGTG	-6	True	NA	12	True	TATAAA	-18	NA	38297167	38323211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38320617_38320768_38322125_38322300_38322508
transcript_58316.known	chr17	-	482	4	FSM	ENSG00000276170.5	ENST00000617855.1	482	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.6823829464998	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAGAAATTAGCCA	1159	False	NA	-22	True	NA	NA	NA	38452444	38450587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38450724_38451305_38451394_38451625_38451757_38452317
transcript_58317.nnic	chr17	-	670	4	NNC	ENSG00000276170.5	novel	734	4	NA	NA	143	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	16.391054470859	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1383	False	NA	NA	False	AATAAA	-33	NA	38452220	38450393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_38450724_38451305_38451394_38451625_38451828_38452170
transcript_58319.nic	chr17	-	830	4	NIC	ENSG00000276170.5	novel	734	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	17.7451088722749	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1137	False	NA	NA	False	AATAAA	-33	NA	38452466	38450393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_38450724_38451305_38451526_38451625_38451757_38452317
transcript_58320.nnic	chr17	-	802	4	NNC	ENSG00000276170.5	novel	734	4	NA	NA	143	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	16.6599986661331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1383	False	NA	NA	False	AATAAA	-33	NA	38452220	38450393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_38450724_38451305_38451526_38451625_38451828_38452170
transcript_58322.nic	chr17	-	1025	3	ISM	ENSG00000276170.5	ENST00000617990.5	734	4	199	0	131	0	3prime_fragment	FALSE	canonical	3	26	junction_2	8.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1371	False	NA	NA	False	AATAAA	-33	NA	38452232	38450393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_38450724_38451305_38451394_38451625
transcript_58323.nic	chr17	-	1145	3	FSM	ENSG00000276170.5	ENST00000692656.1	850	3	-295	0	143	0	multi-exon	FALSE	canonical	3	16	junction_2	13.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1383	False	NA	NA	False	AATAAA	-33	NA	38452220	38450393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38450724_38451305_38451526_38451625
transcript_58324.nic	chr17	-	610	3	NIC	ENSG00000276170.5	novel	654	3	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	10	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	1137	False	NA	NA	False	AATAAA	-33	NA	38452466	38450393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_38450724_38451625_38451757_38452317
transcript_58327.known	chr17	-	401	2	FSM	ENSG00000276170.5	ENST00000615582.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGCTGAGATTCTATTCC	1915	False	NA	NA	False	NA	NA	NA	38451688	38451055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38451394_38451625
transcript_58328.known	chr17	-	643	2	FSM	ENSG00000276170.5	ENST00000619955.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGGAGCCTCTCCGCTC	1700	False	NA	NA	False	AATAAA	-13	NA	38451903	38451160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38451526_38451625
transcript_58329.known	chr17	+	5911	24	FSM	ENSG00000275832.5	ENST00000622683.5	5911	24	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	36.8128665762075	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	-5	True	NA	28	True	AATAAA	-14	NA	38428463	38512385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38428549_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38509943
transcript_5833.known	chr1	-	921	8	FSM	ENSG00000162604.12	ENST00000488206.5	921	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	120.286562603049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTGTTGAGTTAA	349	False	NA	NA	False	NA	NA	NA	61725113	61681244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724287_61724426_61724901
transcript_58330.known	chr17	-	702	4	FSM	ENSG00000276170.5	ENST00000617990.5	734	4	32	0	32	0	multi-exon	FALSE	canonical	3	19	junction_3	10.077477638554	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	0	True	NA	NA	False	AATAAA	-33	NA	38452399	38450393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38450724_38451305_38451394_38451625_38451828_38452317
transcript_58333.known	chr17	-	486	2	FSM	ENSG00000275532.2	ENST00000618407.2	494	2	0	8	0	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAAAATGTCAGTCCTAA	NA	False	NA	NA	False	AATAAA	-18	NA	38706261	38703479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38703758_38706053
transcript_58335.known	chr17	+	2296	1	FSM	ENSG00000277969.1	ENST00000612330.1	2296	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCGTGTGAGAGCGTC	-10	True	NA	NA	False	AATAAA	-20	NA	38702451	38704747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38702500_38704700
transcript_58342.nnic	chr17	-	1423	11	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	-80	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	38.9780707577992	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGTAGTTCTTT	-1	True	NA	-6	True	AATAAA	-13	NA	38748458	38733899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_38734254_38735491_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_58346.known	chr17	-	1534	11	FSM	ENSG00000277258.5	ENST00000616129.4	1534	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	41.3967390020035	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	1450	False	NA	-25	True	AATATA	-43	NA	38748378	38735043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195
transcript_5835.nic	chr1	-	1031	7	NIC	ENSG00000162604.12	novel	921	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	93.0049281848369	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	300	False	NA	-6	True	AATAAA	-18	NA	61725162	61681045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
transcript_58351.known	chr17	-	2179	10	FSM	ENSG00000277258.5	ENST00000611883.4	2179	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	33.8923495500783	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAATTGCCCCTCCAC	3200	False	NA	NA	False	NA	NA	NA	38746628	38734279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38746467
transcript_58352.nnic	chr17	-	1352	10	NNC	ENSG00000277258.5	novel	2179	10	NA	NA	617	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	33.8923495500783	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	-9	True	NA	-25	True	AATATA	-43	NA	38747567	38735043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747469
transcript_58353.known	chr17	-	1499	10	FSM	ENSG00000277258.5	ENST00000618941.4	1499	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.9858164339244	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGGGTTTTATAAATAAAT	1644	False	NA	-90	True	NA	NA	NA	38748184	38735108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878
transcript_58354.nnic	chr17	-	1517	10	NIC	ENSG00000277258.5	novel	1534	11	NA	NA	-80	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_9	33.8923495500783	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	-1	True	NA	-25	True	AATATA	-43	NA	38748458	38735043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_58362.known	chr17	+	2552	4	FSM	ENSG00000277972.2	ENST00000613478.2	2552	4	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	15.121728296285	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGTGGGGAGGAGAGA	-7	True	NA	NA	False	NA	NA	NA	38730340	38735605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38730407_38730759_38730796_38731319_38731440_38733275
transcript_58363.known	chr17	+	2098	1	FSM	ENSG00000277182.1	ENST00000610658.1	2098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTAAATTCATTCTTAA	NA	False	NA	NA	False	AATAGA	-16	NA	38749359	38751457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38749400_38751500
transcript_58364.known	chr17	-	459	2	FSM	ENSG00000277258.5	ENST00000610747.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGTAGTTCTTT	-5	True	NA	-6	True	AATAAA	-13	NA	38735596	38733899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38734254_38735491
transcript_58366.known	chr17	+	762	6	FSM	ENSG00000277791.5	ENST00000619426.5	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_5	206.633395171255	9822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	-25	True	NA	27	True	AATAAA	-16	NA	38752740	38764225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760430_38760609_38762410_38762506_38764118
transcript_58367.known	chr17	+	552	5	FSM	ENSG00000277791.5	ENST00000620309.4	552	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	1121.77415284896	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	7	True	NA	27	True	AATAAA	-16	NA	38752772	38764225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38762410_38762506_38764118
transcript_58368.known	chr17	+	662	6	FSM	ENSG00000277791.5	ENST00000613870.4	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	1095.93185919563	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	-2	True	NA	27	True	AATAAA	-16	NA	38752763	38764225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760507_38760609_38762410_38762506_38764118
transcript_58369.known	chr17	+	426	3	FSM	ENSG00000277791.5	ENST00000614132.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2335	junction_2	195.5	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	7619	False	NA	27	True	AATAAA	-16	NA	38760384	38764225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38760609_38762410_38762506_38764118
transcript_58370.known	chr17	-	5383	10	FSM	ENSG00000276293.5	ENST00000619039.5	5383	10	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_9	13.1740485635797	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTATGTGTGAGTCC	-52	True	NA	-15	True	AATAAA	-20	NA	38799556	38765690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38769772_38770435_38770540_38771013_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38784242_38784340_38786822_38786921_38799265
transcript_58376.known	chr17	-	3067	10	FSM	ENSG00000273559.5	ENST00000614790.5	3067	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	13.9044357430761	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCACCTGTGGAGTA	5	True	NA	-8	True	AATAAA	-30	NA	38825321	38800440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_5838.nnic	chr1	-	935	6	NIC	ENSG00000162604.12	novel	969	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	106.691330481909	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-9	True	NA	-6	True	AATAAA	-18	NA	61725144	61681045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724919
transcript_58387.nic	chr17	-	712	5	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-53	10132	-19	-219	5prime_fragment	FALSE	canonical	3	82	junction_1	9.85837207656518	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGAAGAAAAAGAAGG	NA	False	NA	NA	False	NA	NA	NA	38825374	38810572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_58390.nic	chr17	-	689	4	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-53	12354	-19	-2441	5prime_fragment	FALSE	canonical	3	95	junction_3	5.73488351136175	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGTATACCAGATAA	NA	False	NA	NA	False	ATTAAA	-35	NA	38825374	38812794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_38812865_38814860_38815098_38820900_38821074_38825165
transcript_58393.nic	chr17	-	383	2	ISM	ENSG00000273559.5	ENST00000622665.1	976	6	-68	10546	-19	-10546	5prime_fragment	FALSE	canonical	3	95	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGAGGAGCTGGGGGTG	NA	False	NA	0	True	NA	NA	NA	38825374	38820899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_38821074_38825165
transcript_58398.known	chr17	-	588	5	FSM	ENSG00000125691.14	ENST00000245857.9	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	3172.46137683345	4155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	338	False	NA	-25	True	AATAAA	-25	NA	38853428	38850080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853301
transcript_58408.known	chr17	-	3081	1	FSM	ENSG00000125691.14	ENST00000577760.1	3081	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTGG	2	True	NA	NA	False	NA	NA	NA	38853764	38850683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38850700_38853800
transcript_58409.known	chr17	-	2706	5	FSM	ENSG00000125691.14	ENST00000479035.7	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_4	898.178260424956	8478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	9	True	NA	NA	False	ATTAAA	-22	NA	38853721	38847859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_58410.known	chr17	-	625	6	FSM	ENSG00000125691.14	ENST00000394332.5	625	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	2722.71585002916	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTAAATGTTTTCCTT	8	True	NA	NA	False	ATTAAA	-17	NA	38853722	38847864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38848040_38850116_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_58411.known	chr17	-	615	4	FSM	ENSG00000125691.14	ENST00000577407.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_3	994.9275797207	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAAAAACTA	-7	True	NA	6	True	NA	NA	NA	38853737	38850113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38850476_38852603_38852733_38853021_38853106_38853697
transcript_58412.known	chr17	-	2779	3	FSM	ENSG00000125691.14	ENST00000584912.5	2779	3	0	0	0	0	multi-exon	FALSE	canonical	3	5280	junction_2	1084	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-10	True	NA	-25	True	AATAAA	-25	NA	38853740	38850080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38852733_38853021_38853106_38853697
transcript_58413.known	chr17	-	444	4	FSM	ENSG00000125691.14	ENST00000394333.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3127.85563747576	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTAAATGTTTTCCTT	-5	True	NA	NA	False	ATTAAA	-17	NA	38853735	38847864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38848058_38852603_38852733_38853021_38853106_38853697
transcript_58418.known	chr17	+	357	1	FSM	ENSG00000244086.1	ENST00000462007.1	357	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTATTTTAATAAATT	120	False	NA	-24	True	NA	NA	NA	38855313	38855670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38855300_38855700
transcript_58420.known	chr17	+	3910	7	FSM	ENSG00000002834.18	ENST00000318008.11	3910	7	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_6	57.1792988958611	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTCCTCTCTGGCTC	-3	True	NA	27	True	AATAAA	-22	NA	38870057	38921770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604
transcript_58428.known	chr17	+	3492	8	FSM	ENSG00000002834.18	ENST00000435347.7	3492	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	221.563921766544	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCGGACTTGGTTTCCT	82	False	NA	18	True	AATAAA	-13	NA	38870142	38921761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604_38919983_38920306
transcript_58429.known	chr17	+	3692	2	FSM	ENSG00000263874.2	ENST00000583195.2	3692	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAGAATTATAAATTA	5791	False	NA	NA	False	AATAAA	-22	NA	38925167	38929384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38925892_38926416
transcript_58431.known	chr17	+	2698	4	FSM	ENSG00000214553.11	ENST00000647826.2	2714	4	0	16	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	76.3675323681471	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCACTCTGCAAAGAAT	5848	False	NA	7	True	AATAAA	-31	NA	39033108	39053199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39033446_39034169_39034242_39044387_39046342_39052864
transcript_58436.known	chr17	+	2305	5	FSM	ENSG00000263818.5	ENST00000583447.5	2305	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	4.38035386698381	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	NA	False	NA	NA	False	NA	NA	NA	39057018	39081451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39057160_39063421_39063547_39072466_39072592_39073067_39073334_39079803
transcript_58437.known	chr17	+	2777	1	FSM	ENSG00000280177.1	ENST00000623613.1	2777	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGCCTGATTAAAAAAAAT	1	True	NA	NA	False	NA	NA	NA	39165072	39167849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39165100_39167800
transcript_58438.known	chr17	-	3722	13	FSM	ENSG00000067191.16	ENST00000622445.4	3722	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	13.2610017218409	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTCTTGTGGCATCACTGT	-1	True	NA	NA	False	AATACA	-15	NA	39197703	39173455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39175658_39177349_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_58441.known	chr17	+	792	6	FSM	ENSG00000108298.12	ENST00000582193.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5873.55610852574	46480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	-2	True	NA	67	True	AATAAA	-10	NA	39200344	39204720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39200479_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_58445.known	chr17	+	1330	5	FSM	ENSG00000108298.12	ENST00000678573.1	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	13054	junction_4	951.293067356217	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAGATCAGCCATTAAA	134	False	NA	33	True	AATAAA	-38	NA	39200506	39204686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_58446.known	chr17	+	1051	6	FSM	ENSG00000108298.12	ENST00000579260.5	1051	6	0	0	0	0	multi-exon	FALSE	canonical	3	1226	junction_1	5401.4371050675	6926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTAATCTGCCTTC	-5	True	NA	58	True	AATAAA	-1	NA	39200341	39204711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39200744_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_58447.known	chr17	+	1247	5	FSM	ENSG00000108298.12	ENST00000577741.2	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	10069	junction_1	1954.85376690943	4778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	2	True	NA	74	True	AATAAA	-17	NA	39200316	39204727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39200350_39201212_39201320_39202316_39203110_39204076_39204188_39204524
transcript_5845.known	chr1	-	577	5	FSM	ENSG00000162604.12	ENST00000496465.1	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	107.64292823962	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTTTCTCAATCTAGA	-9	True	NA	NA	False	NA	NA	NA	61725144	61694697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
transcript_58450.known	chr17	-	1620	15	FSM	ENSG00000108306.13	ENST00000577399.5	1620	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	8.47445139997937	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGAGGTGGTCAACCTT	37	False	NA	NA	False	NA	NA	NA	39402523	39261459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39402172
transcript_58452.known	chr17	-	8137	17	FSM	ENSG00000125686.12	ENST00000300651.11	8137	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	6.06958349065239	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-2	True	NA	0	True	AATAAA	-20	NA	39451263	39404284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_58453.known	chr17	-	4584	16	FSM	ENSG00000125686.12	ENST00000577831.5	4584	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	9.65401470891774	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAGAAAGTAAAAGAC	-11	True	NA	NA	False	AATACA	-31	NA	39451272	39407713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_58456.known	chr17	+	860	2	FSM	ENSG00000266469.2	ENST00000582842.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTACTTCAAAAGTGAGCT	9	True	NA	NA	False	NA	NA	NA	39401792	39406233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39401899_39405479
transcript_58457.known	chr17	-	2870	18	FSM	ENSG00000125686.12	ENST00000394287.7	2870	18	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	8.27134964280285	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-7	True	NA	0	True	AATAAA	-20	NA	39451268	39404284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39405309_39410580_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_58459.nnic	chr17	+	617	2	NNC	ENSG00000167258.15	novel	4165	13	NA	NA	-22	-32224	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAGAAGTCTCCAGCAAG	NA	False	NA	NA	False	AAAAAG	-7	NA	39461463	39462468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_39461669_39462056
transcript_58460.known	chr17	+	8287	14	FSM	ENSG00000167258.15	ENST00000447079.6	8287	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	15.7829208867046	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTCCATTGCAT	-9	True	NA	6	True	ATTAAA	-18	NA	39461485	39534544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39463118_39470878_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530603
transcript_58462.known	chr17	+	645	1	FSM	ENSG00000273576.1	ENST00000615852.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGCCTAAACTCCCTT	3989	False	NA	16	True	AATAAA	-16	NA	39566914	39567559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39566900_39567600
transcript_58463.known	chr17	+	1815	7	FSM	ENSG00000131771.14	ENST00000254079.9	1815	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	8.05018978382222	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGACTCCTCTTTCA	-2	True	NA	14	True	AATAAA	-14	NA	39626951	39636624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39627474_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_58464.known	chr17	+	1504	7	FSM	ENSG00000131771.14	ENST00000394267.2	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	24.3584345419268	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACTCCTCTTTCAGG	-8	True	NA	16	True	AATAAA	-16	NA	39628497	39636626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39628707_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_58468.known	chr17	+	1419	7	FSM	ENSG00000131771.14	ENST00000394265.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.4280029363954	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGACTCCTCTTTCAG	-8	True	NA	15	True	AATAAA	-15	NA	39628497	39636625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39628623_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_5847.known	chr1	-	1056	5	FSM	ENSG00000162604.12	ENST00000371178.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	115.810999045859	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAAGGGC	342	False	NA	NA	False	NA	NA	NA	61725120	61694153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61694771_61700933_61701026_61709328_61709438_61723712_61723787_61724956
transcript_58471.known	chr17	+	2770	15	FSM	ENSG00000131748.16	ENST00000336308.10	2770	15	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	26.6095157139436	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGCTCAGTAATCAAT	-9	True	NA	17	True	ATTAAA	-18	NA	39637143	39664201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_5848.known	chr1	-	427	1	FSM	ENSG00000271200.1	ENST00000605725.1	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAGTCATTATTTTCT	NA	False	NA	0	True	AATAAA	-20	NA	61742424	61741997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61742000_61742400
transcript_58480.nic	chr17	+	2028	14	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	95.4569204858352	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	7900	False	NA	32	True	ATTAAA	-27	NA	39637069	39663484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_58483.known	chr17	+	1949	14	FSM	ENSG00000131748.16	ENST00000394250.8	1949	14	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_4	100.81044371557	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTATTAAGCCAAT	-9	True	NA	-18	True	NA	NA	NA	39637143	39663434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_5849.nic	chr1	+	3730	26	ISM	ENSG00000132849.22	ENST00000635214.1	4863	36	-52	199592	-52	39127	5prime_fragment	FALSE	canonical	3	59	junction_5	7.05362318245028	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGGTAACTTGAACCTC	-40	True	NA	NA	False	AAGAAA	-6	NA	61742424	61914658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_61742556_61762857_61762915_61763012_61763180_61766278_61766474_61769282_61769423_61771430_61771627_61775205_61775335_61787753_61787973_61791347_61791448_61795466_61795559_61797286_61797429_61801622_61801770_61805447_61805525_61808473_61808531_61822944_61823080_61827421_61827584_61833653_61833786_61856029_61856240_61861550_61861668_61864237_61864634_61875242_61875367_61884236_61884409_61899582_61899655_61901281_61901460_61908371_61908483_61914586
transcript_58496.known	chr17	+	1989	14	FSM	ENSG00000131748.16	ENST00000580611.5	1989	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	134.230791271764	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	0	True	NA	32	True	ATTAAA	-27	NA	39637152	39663484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39637232_39653480_39653751_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662368_39662803
transcript_58497.known	chr17	+	960	2	FSM	ENSG00000173991.6	ENST00000309889.3	960	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATCTCTTTCCTTGTG	0	True	NA	15	True	AATAAA	-20	NA	39665348	39666554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39665470_39665715
transcript_58500.known	chr17	+	821	3	FSM	ENSG00000141744.4	ENST00000394246.1	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	23	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	12	False	NA	6	True	AATAAA	-15	NA	39667980	39670473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39668071_39669628_39669837_39669950
transcript_58502.nnic	chr17	+	848	3	NNC	ENSG00000141744.4	novel	821	3	NA	NA	444	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	25	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGTCAGTGCTGTGTG	282	False	NA	8	True	AATAAA	-17	NA	39668906	39670475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_39669022_39669628_39669837_39669950
transcript_58505.known	chr17	-	2687	8	FSM	ENSG00000161395.14	ENST00000300658.9	2687	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	23.8353193597147	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-19	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_58506.known	chr17	-	2533	7	FSM	ENSG00000161395.14	ENST00000378011.8	2533	7	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_5	49.5232829642337	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-19	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39685921_39686020_39687833
transcript_58507.known	chr17	-	3028	7	FSM	ENSG00000161395.14	ENST00000309862.10	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	16.8498269031663	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-19	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_58513.known	chr17	+	849	4	FSM	ENSG00000141736.14	ENST00000584014.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	7.71722460186015	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCGCAGGACAGAAGA	6	True	NA	NA	False	NA	NA	NA	39688100	39695181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39688279_39688695_39688801_39693260_39693326_39694680
transcript_58514.known	chr17	-	2220	4	FSM	ENSG00000161395.14	ENST00000579146.5	2220	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	66.0504857413378	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-19	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39672867_39684596_39684750_39685921_39686020_39687833
transcript_5852.nic	chr1	+	1853	11	ISM	ENSG00000132849.22	ENST00000646453.1	5234	18	-97	46555	-97	0	5prime_fragment	FALSE	canonical	3	6	junction_1	24.5242736895509	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTAGATTTTTCTCTC	NA	False	NA	18	True	AATAAA	-27	NA	61951955	62117395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_61952412_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131
transcript_58520.known	chr17	-	706	3	FSM	ENSG00000141741.12	ENST00000474210.1	706	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	295	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	0	True	NA	-6	True	AGTAAA	-20	NA	39730532	39729155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729606_39729684_39729762_39730353
transcript_58521.known	chr17	-	1397	4	FSM	ENSG00000141741.12	ENST00000394231.8	1397	4	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_3	22.6421435969889	2629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCTGTACAAAGCCTGG	0	True	NA	NA	False	AGTAAA	-15	NA	39730532	39728509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729606_39729684_39729762_39730193_39730292_39730406
transcript_58522.known	chr17	-	825	3	FSM	ENSG00000141741.12	ENST00000469568.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	594	junction_1	23.5	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	41	False	NA	-6	True	AGTAAA	-20	NA	39730491	39729155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729606_39729684_39729762_39730193
transcript_58523.known	chr17	-	806	3	FSM	ENSG00000141741.12	ENST00000577810.1	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_2	24.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTAACTAGTGTGTGTT	-4	True	NA	-8	True	AGTAAA	-18	NA	39730510	39729157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729762_39730193_39730292_39730406
transcript_58524.known	chr17	-	925	2	FSM	ENSG00000141741.12	ENST00000498164.2	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCTAACTAGTGTGTG	16	False	NA	-10	True	AGTAAA	-16	NA	39730516	39729159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729762_39730193
transcript_58525.known	chr17	-	804	6	FSM	ENSG00000161395.14	ENST00000584620.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	60.4297939761505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACACATCAGCTGTCCTG	37	False	NA	NA	False	NA	NA	NA	39688001	39673874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39674055_39674616_39674680_39676613_39676756_39684596_39684750_39685921_39686020_39687833
transcript_58526.known	chr17	+	2233	15	FSM	ENSG00000141738.14	ENST00000309156.9	2233	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	37.0427910307382	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	0	True	NA	24	True	AATAAA	-18	NA	39737937	39747285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_58529.known	chr17	+	2093	15	FSM	ENSG00000141738.14	ENST00000394211.7	2093	15	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	28.7473157575678	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	-3	True	NA	24	True	AATAAA	-18	NA	39738336	39747285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_58530.known	chr17	+	1955	15	FSM	ENSG00000141738.14	ENST00000394209.6	1955	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	49.3075003608653	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGATGAGGAGCGGGA	1208	False	NA	NA	False	NA	NA	NA	39739966	39746988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39740182_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_58536.nic	chr17	+	2057	14	NIC	ENSG00000141738.14	novel	2093	15	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_12	45.4048194923853	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	323	False	NA	24	True	AATAAA	-18	NA	39738284	39747285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
transcript_58544.nic	chr17	+	1367	5	NIC	ENSG00000141738.14	novel	2093	15	NA	NA	-21	223	intron_retention	FALSE	canonical	3	100	junction_1	33.3419780457009	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGGCCAGGAAT	323	False	NA	NA	False	NA	NA	NA	39738284	39743835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_39738393_39742251_39742457_39742565_39743055_39743179_39743302_39743392
transcript_58547.nic	chr17	+	1457	4	ISM	ENSG00000141738.14	ENST00000584819.5	1146	7	-21	770	-21	222	intron_retention	FALSE	canonical	3	100	junction_1	38.0029238641216	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGCCAGGAA	323	False	NA	NA	False	NA	NA	NA	39738284	39743834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_39738393_39742251_39742457_39742565_39743055_39743179
transcript_58549.nic	chr17	+	1584	3	ISM	ENSG00000141738.14	ENST00000578702.5	630	6	-68	267	-21	224	intron_retention	FALSE	canonical	3	100	junction_1	46.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGGCCAGGAATG	323	False	NA	NA	False	NA	NA	NA	39738284	39743836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_39738393_39742251_39742457_39742565
transcript_58554.known	chr17	-	2209	4	FSM	ENSG00000073605.19	ENST00000479136.5	2209	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	3.85861230093008	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	9845	False	NA	0	True	ATTAAA	-23	NA	39907739	39904594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110
transcript_58557.known	chr17	-	2109	4	FSM	ENSG00000172057.10	ENST00000304046.7	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	15.1070255914995	1261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCTGGCCTTCGC	-1	True	NA	-8	True	AATAAA	-20	NA	39927601	39921042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39922686_39923111_39923264_39924029_39924226_39927483
transcript_58558.known	chr17	+	2147	12	FSM	ENSG00000108344.15	ENST00000264639.9	2147	12	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_3	58.5512419499732	2867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGCATCAGTTACTAT	0	True	NA	69	True	AATAAA	-16	NA	39980806	39997959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39981191_39984293_39984485_39986574_39986713_39988682_39988820_39989738_39989930_39990093_39990198_39994953_39995069_39995175_39995296_39995423_39995528_39996182_39996339_39997329_39997381_39997503
transcript_58562.known	chr17	-	3480	26	FSM	ENSG00000008838.21	ENST00000394128.7	3480	26	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_25	39.892134563094	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-2	True	NA	-13	True	AATAAA	-17	NA	40054408	40019103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
transcript_58563.nic	chr17	-	3511	26	NIC	ENSG00000008838.21	novel	3480	26	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	95	junction_25	41.4272181059747	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-11	True	NA	-13	True	AATAAA	-17	NA	40054417	40019103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053658_40054360
transcript_58568.known	chr17	+	2538	10	FSM	ENSG00000126351.13	ENST00000264637.8	2538	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	5.18544972870135	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	540	False	NA	21	True	CATAAA	-18	NA	40062809	40093867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093019
transcript_58569.known	chr17	+	5204	9	FSM	ENSG00000126351.13	ENST00000450525.7	5204	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	5.35607132140714	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCGTCTCGTAAAGGAG	-2	True	NA	NA	False	TATAAA	-22	NA	40062964	40093002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205
transcript_58570.known	chr17	-	2630	8	FSM	ENSG00000126368.6	ENST00000246672.4	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	3.39867921524866	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTCTGTGGTGTGTG	-6	True	NA	-6	True	NA	NA	NA	40100589	40092792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40093283_40093911_40094123_40094934_40095121_40095443_40096088_40096442_40096588_40096690_40096780_40097064_40097404_40100063
transcript_58574.known	chr17	+	3890	14	FSM	ENSG00000108349.17	ENST00000264645.12	3890	14	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_13	71.3226687450987	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTGCCAGTGTTTTG	11	True	NA	18	True	AATAAA	-19	NA	40140536	40172171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170446
transcript_58576.known	chr17	+	580	4	FSM	ENSG00000108349.17	ENST00000581849.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_3	31.0519278342299	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTGGGTAAAAAGGGC	11	True	NA	NA	False	NA	NA	NA	40140536	40162023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752
transcript_58577.known	chr17	+	7492	8	FSM	ENSG00000171475.14	ENST00000323571.9	7492	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	6.5993196928292	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTCCTGACTTGAAA	6	True	NA	21	True	AATAAA	-21	NA	40219303	40284136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40219493_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_58583.known	chr17	+	1948	12	FSM	ENSG00000094804.12	ENST00000649662.1	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	240.022106419904	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTTGTGTATCTCTAG	30	True	NA	-72	True	CATAAA	-41	NA	40287932	40302236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40287950_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_5859.nnic	chr1	-	985	2	Antisense	novelGene_ENSG00000132849.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTTTTTAATCATTCCT	NA	False	NA	3	True	NA	NA	NA	62180898	62178542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_62179316_62180686
transcript_58592.known	chr17	+	4564	12	FSM	ENSG00000094804.12	ENST00000209728.9	4564	12	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_11	66.7073291969859	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCCACAGATGTTTCT	-24	True	NA	8	True	AATAAA	-19	NA	40287878	40304657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40288091_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_58593.known	chr17	+	2024	9	FSM	ENSG00000131759.18	ENST00000394089.6	2024	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	15.1801679832603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTACTGGGGACCTTC	14	True	NA	NA	False	NA	NA	NA	40318280	40356331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40318449_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_58594.known	chr17	+	2285	8	FSM	ENSG00000131759.18	ENST00000394081.7	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13.0540477732122	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	-13	True	NA	26	True	NA	NA	NA	40342362	40356795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40342868_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_58597.known	chr17	-	5695	35	FSM	ENSG00000131747.15	ENST00000423485.6	5695	35	0	0	0	0	multi-exon	TRUE	canonical	1	375	junction_4	170.132952285227	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAGAATGCCTCTTTTA	-2	True	NA	-5	True	AATAAA	-19	NA	40417896	40388524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_58599.nic	chr17	-	3982	29	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-82	6940	-82	918	5prime_fragment	FALSE	canonical	3	914	junction_19	113.207435574647	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGAAAAGAGAACCAGGTAT	NA	False	NA	NA	False	AAGAAA	-1	NA	40417978	40395464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_58600.nic	chr17	-	3891	28	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-82	7774	-82	84	5prime_fragment	FALSE	canonical	3	914	junction_18	115.246964497069	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGAAAATTAAGGTAA	NA	False	NA	NA	False	AAGAAA	-3	NA	40417978	40396298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_5861.known	chr1	+	569	3	FSM	ENSG00000132849.22	ENST00000465798.2	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	19	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTAGATTTTTCTCTC	NA	False	NA	18	True	AATAAA	-27	NA	62114089	62117395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62114247_62116531_62116680_62117131
transcript_58615.nic	chr17	-	249	2	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-82	28330	-82	-3375	5prime_fragment	FALSE	canonical	3	1317	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATGCTAAGAAAAGAC	NA	False	NA	-33	True	AATAAA	-7	NA	40417978	40416854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_40416896_40417770
transcript_58616.known	chr17	+	2205	4	FSM	ENSG00000141753.7	ENST00000269593.5	2205	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_3	1.24721912892465	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTGTTTGGTTGAT	1	True	NA	34	True	AAAACA	-23	NA	40443449	40457725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40444085_40452984_40453143_40453927_40454063_40456448
transcript_58617.known	chr17	-	2492	11	FSM	ENSG00000073584.20	ENST00000643683.1	2492	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	378.934677748026	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTATATGTTTCTTAAAG	1016	False	NA	-55	True	AATAGA	-26	NA	40647641	40627762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647452
transcript_58620.known	chr17	-	2764	6	FSM	ENSG00000213424.9	ENST00000394049.5	2764	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	5.19230199429887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTGTTAAAAAA	-2	True	NA	NA	False	AATAAA	-19	NA	40665156	40654664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40664921
transcript_58621.known	chr17	-	2703	6	FSM	ENSG00000213424.9	ENST00000394052.5	2703	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.78567765543682	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTGTTAAAAAA	-23	True	NA	NA	False	AATAAA	-19	NA	40665177	40654664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40665003
transcript_58625.known	chr17	+	1419	1	FSM	ENSG00000278834.1	ENST00000619697.1	1419	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAAGGGATTTCAGT	218	False	NA	NA	False	ATTAAA	-16	NA	40648299	40649718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40648300_40649700
transcript_58626.known	chr17	-	5150	11	FSM	ENSG00000073584.20	ENST00000348513.12	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_2	90.2576312563098	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTTAAGAGCCTGA	16	True	NA	-1	True	ATTAAA	-18	NA	40647818	40624961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_58627.known	chr17	-	2388	10	FSM	ENSG00000073584.20	ENST00000578112.6	2388	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	396.703764216083	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCAGTGTTTTTAATGC	-14	True	NA	-2	True	AATAAA	-18	NA	40647848	40627709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645795_40645848_40647772
transcript_58628.known	chr17	-	2488	12	FSM	ENSG00000073584.20	ENST00000644701.1	2488	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	451.564973862937	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAAAAAGGTCTCAG	-3	True	NA	-14	True	AATAAA	-6	NA	40647837	40627721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_58629.known	chr17	-	2319	6	FSM	ENSG00000073584.20	ENST00000493660.6	2319	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	495.896118153792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAACCAGTCTCAAAAA	-8	True	NA	NA	False	NA	NA	NA	40647842	40634162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
transcript_58630.known	chr17	-	2156	4	FSM	ENSG00000073584.20	ENST00000474246.2	2156	4	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_2	25.8499946271217	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCCTAGTTATGCAT	-12	True	NA	-5	True	AATAAA	-16	NA	40647846	40640573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40642560_40645575_40645620_40645795_40645848_40647772
transcript_58631.known	chr17	-	1320	9	FSM	ENSG00000073584.20	ENST00000646482.1	1320	9	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_1	79.6232338893617	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGCCCACCACTTGTT	2821	False	NA	NA	False	NA	NA	NA	40645836	40630454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795
transcript_58634.nic	chr17	+	634	4	NIC	ENSG00000167920.11	novel	611	4	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	41.9602986961088	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTGTGTGTGTGG	NA	False	NA	7	True	ATTAAA	-12	NA	40819103	40836267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_40819209_40833114_40833200_40834381_40834520_40835961
transcript_58636.known	chr17	+	611	4	FSM	ENSG00000167920.11	ENST00000662074.1	611	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	48.5821183381522	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTGTGTGTGTGG	17	False	NA	7	True	ATTAAA	-12	NA	40819197	40836267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40819280_40833114_40833200_40834381_40834520_40835961
transcript_58637.known	chr17	+	854	3	FSM	ENSG00000167920.11	ENST00000436612.5	854	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	49.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTTTCATGACTTCT	NA	False	NA	13	True	AATAAA	-15	NA	40819105	40835085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40819171_40833114_40833200_40834381
transcript_58638.known	chr17	+	2070	3	FSM	ENSG00000167920.11	ENST00000301665.8	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	17	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTGTGGTTT	NA	False	NA	10	True	ATTAAA	-15	NA	40819112	40836270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40819209_40833114_40833200_40834381
transcript_58639.known	chr17	+	1164	3	FSM	ENSG00000167920.11	ENST00000654043.1	1164	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	52.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGCATCTGGAATATGA	-2	True	NA	6	True	AATAAA	-23	NA	40819178	40835359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40819280_40833114_40833200_40834381
transcript_58640.known	chr17	-	2163	8	FSM	ENSG00000186395.9	ENST00000635956.2	2163	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.4436582317338	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	-1	True	NA	-4	True	AATAAA	-22	NA	40822614	40818116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40818483_40818766_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_58641.known	chr17	+	789	2	FSM	ENSG00000167920.11	ENST00000670968.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTAGTTTTCATGACT	4904	False	NA	10	True	AATAAA	-12	NA	40833111	40835082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40833200_40834381
transcript_58642.known	chr17	+	1039	1	FSM	ENSG00000180386.7	ENST00000391354.1	1039	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTTTTTTTTTATTT	13	False	NA	NA	False	AATAAA	-23	NA	41275658	41276697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41275700_41276700
transcript_58653.known	chr17	-	1390	6	FSM	ENSG00000171345.13	ENST00000361566.7	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	4345	junction_5	224.824020069031	1191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACGTTTGGTTTATT	-2	True	NA	-14	True	AATAAA	-19	NA	41528308	41523616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
transcript_58654.known	chr17	-	1517	8	FSM	ENSG00000128422.18	ENST00000311208.13	1517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.989743318610787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGTGTCCTTGTTCTG	0	True	NA	-2	True	AATAAA	-18	NA	41624575	41619441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41619689_41620535_41620559_41620658_41620880_41620965_41621092_41621592_41621755_41622354_41622512_41622949_41623033_41624077
transcript_58656.known	chr17	-	684	4	FSM	ENSG00000128422.18	ENST00000649249.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCCTTGCCTGATGAC	-6	True	NA	-45	True	NA	NA	NA	41621201	41619484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41619689_41620535_41620559_41620658_41620880_41620965
transcript_58666.known	chr17	+	1120	3	FSM	ENSG00000173812.11	ENST00000310837.8	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2557	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCAGAAATACCTG	14	False	NA	16	True	AATAAA	-2	NA	41688900	41691630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41689070_41690087_41690190_41690781
transcript_58669.known	chr17	+	2338	4	FSM	ENSG00000173812.11	ENST00000469257.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	4217	junction_1	379.415632548558	25931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGTGACTTTTT	-2	True	NA	10	True	AATAAA	-17	NA	41688884	41692668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41689070_41689777_41689942_41690087_41690190_41690781
transcript_58670.known	chr17	+	2170	2	FSM	ENSG00000173812.11	ENST00000462917.1	2170	2	0	0	0	0	multi-exon	FALSE	canonical	3	5144	junction_1	0	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	-2	True	NA	32	True	AATAAA	-18	NA	41688884	41691646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41690190_41690781
transcript_58671.known	chr17	+	1428	3	FSM	ENSG00000173812.11	ENST00000482111.1	1428	3	0	0	0	0	multi-exon	FALSE	canonical	3	4217	junction_1	463.5	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTGTTTTCAGA	8	False	NA	8	True	TTTAAA	-10	NA	41688894	41691622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41689070_41689777_41690190_41690781
transcript_58672.known	chr17	+	815	4	FSM	ENSG00000173812.11	ENST00000469308.1	815	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2335.09971236062	4579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTAGTCTTGAAGTC	48	False	NA	36	True	AATAAA	-14	NA	41688934	41690999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41689266_41689777_41689942_41690087_41690190_41690781
transcript_58674.known	chr17	-	3298	15	FSM	ENSG00000173801.17	ENST00000393930.5	3298	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	153.215734258887	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	1548	False	NA	-1	True	AATAAA	-19	NA	41785155	41754603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41784946
transcript_58689.known	chr17	+	598	5	FSM	ENSG00000141756.19	ENST00000585664.5	598	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	50.6211418282915	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCCTGGCCTATGGCGA	-20	True	NA	NA	False	GGGGCT	-44	NA	41812679	41818496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41812740_41813192_41813280_41817057_41817204_41818088_41818279_41818381
transcript_58699.nic	chr17	+	1356	3	ISM	ENSG00000141756.19	ENST00000489591.5	2826	9	-285	4240	9	475	5prime_fragment	FALSE	canonical	2	10	junction_1	49.5	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAGGGGTGCTTTATTC	4	True	NA	NA	False	NA	NA	NA	41812703	41818971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_41813280_41818088_41818279_41818381
transcript_58700.nic	chr17	+	1455	2	ISM	ENSG00000141756.19	ENST00000489591.5	2826	9	-285	4244	9	471	intron_retention	FALSE	canonical	2	10	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAAGGGGTGCTTT	4	True	NA	NA	False	NA	NA	NA	41812703	41818967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_41813280_41818088
transcript_58701.known	chr17	+	398	4	FSM	ENSG00000141756.19	ENST00000429461.5	398	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.5822901229312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGATGTGGTTCTGCTGGA	90	False	NA	NA	False	GGGGCT	-26	NA	41812789	41818120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41812923_41813192_41813280_41817057_41817204_41818088
transcript_58702.known	chr17	+	2585	10	FSM	ENSG00000141756.19	ENST00000321562.9	2585	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	17.1658575861116	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTAGGGTGTCTTTTG	7	True	NA	13	True	AATAAA	-13	NA	41813003	41823213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41819676_41820268_41820462_41820946_41821090_41821653_41821818_41822222
transcript_58703.known	chr17	+	1129	3	FSM	ENSG00000141756.19	ENST00000464180.1	1129	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGACATCTCTGGTGTT	818	False	NA	NA	False	ACTAAA	-10	NA	41820442	41822540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41821090_41821653_41821818_41822222
transcript_58710.nic	chr17	-	1387	9	NIC	ENSG00000141698.17	novel	1408	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	209.285689907361	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	NA	False	NA	-47	True	TTTAAA	-17	NA	41836278	41825226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836078
transcript_58711.known	chr17	-	1408	9	FSM	ENSG00000141698.17	ENST00000435506.7	1408	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_8	162.772655873153	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCTGATTGTGTCTG	-9	True	NA	NA	False	NA	NA	NA	41836232	41825056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_58718.known	chr17	-	730	8	FSM	ENSG00000141698.17	ENST00000415460.5	730	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	235.707359205591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGGCGGGAGCGCTAC	-18	True	NA	NA	False	NA	NA	NA	41836241	41825653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_58727.known	chr17	-	1534	8	FSM	ENSG00000141698.17	ENST00000523903.5	1534	8	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_2	52.9296799575452	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTCTGATTCAGGGGAT	12	False	NA	-1	True	AATATA	-40	NA	41836258	41825180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858
transcript_58728.known	chr17	-	922	8	FSM	ENSG00000141698.17	ENST00000445655.5	922	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	218.237653647091	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTAGAGGACCAGGGCT	-21	True	NA	NA	False	NA	NA	NA	41836244	41827425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836078
transcript_58729.known	chr17	-	4309	29	FSM	ENSG00000131473.17	ENST00000590151.5	4309	29	0	0	0	0	multi-exon	TRUE	canonical	3	482	junction_28	336.929086283261	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGGCTCCTGGCATCC	26	False	NA	-36	True	AATAAA	-24	NA	41918962	41866916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
transcript_58731.known	chr17	-	3682	28	FSM	ENSG00000131473.17	ENST00000393896.6	3682	28	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_27	353.414413400828	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTCTGCTACCTGCT	NA	False	NA	-13	True	AATAAA	-20	NA	41919022	41867573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
transcript_58736.known	chr17	-	4318	28	FSM	ENSG00000131473.17	ENST00000353196.5	4318	28	0	0	0	0	multi-exon	TRUE	canonical	3	593	junction_15	285.329847869178	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATGAAGGCATACTGCT	NA	False	NA	-50	True	AATAAA	-10	NA	41919019	41866930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_58737.known	chr17	-	4293	29	FSM	ENSG00000131473.17	ENST00000352035.7	4293	29	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_16	268.646399110619	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGCTCCTGGCATC	1	True	NA	-37	True	AATAAA	-23	NA	41918951	41866917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_58738.known	chr17	+	3146	12	FSM	ENSG00000204815.10	ENST00000377540.6	3146	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	2.77235466945035	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTCACTCACTTCCT	-24	True	NA	NA	False	AATAAA	-38	NA	41930616	41966503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41930838_41935216_41935349_41935598_41935750_41936472_41936535_41936761_41936928_41938556_41938782_41938964_41939173_41945135_41945223_41949152_41949350_41955216_41955318_41961381_41961467_41964992
transcript_58743.known	chr17	-	1909	15	FSM	ENSG00000168259.17	ENST00000585866.6	1909	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_14	276.050322608478	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGACAGGGAGGCAGCT	-1	True	NA	-36	True	NA	NA	NA	42017439	41976530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42003358_42003558_42017339
transcript_58748.known	chr17	-	1774	14	FSM	ENSG00000168259.17	ENST00000426588.7	1774	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_13	203.049881649485	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGAG	5	True	NA	16	True	NA	NA	NA	42017151	41976478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017039
transcript_58749.known	chr17	-	1729	14	FSM	ENSG00000168259.17	ENST00000674166.1	1729	14	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_13	197.389112005859	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-6	True	NA	-28	True	NA	NA	NA	42017162	41976522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017051
transcript_58750.known	chr17	-	1692	14	FSM	ENSG00000168259.17	ENST00000674214.1	1692	14	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_13	176.499962284388	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGGGGGTGGACAGGGA	-16	True	NA	-43	True	NA	NA	NA	42018526	41976537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_58751.known	chr17	-	1702	14	FSM	ENSG00000168259.17	ENST00000674249.1	1702	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	278.637895705299	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACAGGGAGGCAGCTTG	5	True	NA	-34	True	NA	NA	NA	42017151	41976528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997136_41997240_42000481_42000571_42017039
transcript_58755.known	chr17	-	1713	13	FSM	ENSG00000168259.17	ENST00000316603.12	1713	13	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_12	219.572817585015	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCATTGTCTCCAGTC	17	True	NA	-6	True	AATAAA	-33	NA	42017421	41976420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42017339
transcript_58765.known	chr17	-	2291	9	FSM	ENSG00000168259.17	ENST00000674485.1	2291	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	234.969678894959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAATTTTATCTATAAT	5	True	NA	NA	False	NA	NA	NA	42017151	41986572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017039
transcript_58774.known	chr17	+	5172	4	FSM	ENSG00000173786.17	ENST00000393892.8	5172	4	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_2	32.8667342798493	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGTATTTGATTCCAT	-1	True	NA	16	True	AATAAA	-21	NA	41966794	41977740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41966888_41968067_41968741_41971891_41972032_41973474
transcript_58776.known	chr17	+	2948	4	FSM	ENSG00000168256.18	ENST00000307641.9	2948	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	147.88809583225	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTCCCCTCCCCCTTTTT	394	False	NA	23	True	AATAAA	-24	NA	42017019	42025644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42017627_42021563_42021672_42022398_42022641_42023653
transcript_58779.known	chr17	+	1644	4	FSM	ENSG00000168256.18	ENST00000393880.5	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	143.208472747483	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	-22	True	NA	NA	False	NA	NA	NA	42020096	42024774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42020270_42021563_42021672_42022398_42022641_42023653
transcript_58782.known	chr17	-	1989	4	FSM	ENSG00000187595.17	ENST00000461831.1	1989	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.31245915016974	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-4	True	NA	0	True	AATAAA	-17	NA	42028689	42025575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42027134_42027617_42027729_42028049_42028247_42028566
transcript_58783.known	chr17	+	563	3	FSM	ENSG00000168256.18	ENST00000587337.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCCCCTCAGCCGGA	0	True	NA	NA	False	NA	NA	NA	42020071	42023841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42020205_42022398_42022641_42023653
transcript_58785.known	chr17	+	622	2	FSM	ENSG00000173786.17	ENST00000441615.2	622	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGGCAGCTGTCGGCT	63	False	NA	NA	False	NA	NA	NA	41966881	41968557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41967014_41968067
transcript_58786.known	chr17	+	2583	4	FSM	ENSG00000173786.17	ENST00000393888.1	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	186.541029147894	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGTCTCTCTTACC	-4	True	NA	17	True	AATAAA	-17	NA	41966814	41975176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41966888_41968072_41968741_41971891_41972032_41973474
transcript_58787.known	chr17	-	1876	15	FSM	ENSG00000168259.17	ENST00000586335.2	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	267.531154012663	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	7	True	NA	38	True	ATTAAA	-20	NA	42017431	41976456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987594_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_58788.known	chr17	-	1658	13	FSM	ENSG00000168259.17	ENST00000674306.1	1658	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_10	223.82103155572	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAGAATAAA	-5	True	NA	22	True	ATTAAA	-4	NA	42017443	41976472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41997114_41997240_42000481_42000571_42017339
transcript_58789.known	chr17	-	2124	10	FSM	ENSG00000168259.17	ENST00000674175.1	2124	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	236.119764547309	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACATGAAGGTGTTTG	11	True	NA	NA	False	NA	NA	NA	42017427	41986591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_58790.known	chr17	-	912	4	FSM	ENSG00000168259.17	ENST00000674425.1	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_3	122.882961480517	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAATTTGAGTAAA	7	True	NA	NA	False	NA	NA	NA	42017431	41995818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41996425_41997114_41997240_42000481_42000571_42017339
transcript_58791.known	chr17	+	1598	4	FSM	ENSG00000168256.18	ENST00000393881.7	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	147.420034821142	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	-22	True	NA	NA	False	NA	NA	NA	42020096	42024774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42020205_42021544_42021672_42022398_42022641_42023653
transcript_58792.known	chr17	+	1461	4	FSM	ENSG00000168256.18	ENST00000449471.8	1461	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	129.213862345424	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAGATGGGCCTCACT	-13	True	NA	NA	False	NA	NA	NA	42020105	42024833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42023653
transcript_58793.known	chr17	-	2243	9	FSM	ENSG00000168259.17	ENST00000590847.2	2243	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_8	201.315944164887	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATCTATAATAGCAAAA	16	True	NA	NA	False	NA	NA	NA	42018494	41986565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_58795.nic	chr17	-	1395	6	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	10.8921990433521	81	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	4849	False	NA	0	True	AATAAA	-21	NA	42107855	42101403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42101947_42102215_42102313_42103607_42103799_42104765_42104928_42105017_42105168_42107603
transcript_58796.nnic	chr17	-	1183	5	NNC	ENSG00000108771.13	novel	2591	14	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	15.8173164601332	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	4849	False	NA	0	True	AATAAA	-21	NA	42107855	42101403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_42101947_42102215_42102292_42104765_42104928_42105017_42105168_42107603
transcript_58798.nic	chr17	-	1204	5	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	18.5067555233217	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	4849	False	NA	0	True	AATAAA	-21	NA	42107855	42101403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42101947_42102215_42102313_42104765_42104928_42105017_42105168_42107603
transcript_58805.nnic	chr17	-	892	3	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	21	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	4849	False	NA	0	True	AATAAA	-21	NA	42107855	42101403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42101947_42102215_42102313_42107603
transcript_58806.known	chr17	-	2990	18	FSM	ENSG00000108773.11	ENST00000465682.5	2990	18	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_12	23.640619550544	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGATTGTTTCTTT	-10	True	NA	-9	True	AATAAA	-12	NA	42121058	42113117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119053_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
transcript_58807.known	chr17	-	3115	18	FSM	ENSG00000108773.11	ENST00000225916.10	3115	18	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_12	30.9554876319672	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGTTTCTTTGGTGTAG	-13	True	NA	-2	True	AATAAA	-19	NA	42121367	42113110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42113843_42113999_42114085_42114218_42114283_42114357_42114395_42114489_42114605_42114891_42115036_42115722_42115834_42117034_42117162_42117387_42117597_42117677_42117815_42117906_42118018_42118296_42118404_42119244_42119437_42119536_42119719_42120029_42120120_42120224_42120371_42120705_42120830_42120965
transcript_58809.known	chr17	+	549	1	FSM	ENSG00000260325.2	ENST00000565659.2	549	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGGTGTCCGTTGTCTT	-2	True	NA	NA	False	NA	NA	NA	42122803	42123352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42122800_42123400
transcript_58810.known	chr17	-	1640	6	FSM	ENSG00000108774.15	ENST00000346213.9	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_2	52.681685622235	1510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-1	True	NA	-8	True	AATATA	-23	NA	42154989	42124978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42154892
transcript_58811.known	chr17	-	2408	10	FSM	ENSG00000167925.16	ENST00000587427.6	2408	10	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_9	3.76468318802165	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCTCAGGGTCTGCT	-14	True	NA	0	True	AATAAA	-16	NA	42194494	42189086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42189922_42190184_42190271_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_58812.known	chr17	-	2496	10	FSM	ENSG00000167925.16	ENST00000414034.7	2496	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.17241973881384	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGCCTCAGGGTCTGC	-14	True	NA	-1	True	AATAAA	-15	NA	42194494	42189087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42189922_42190184_42190360_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_58818.known	chr17	-	4921	24	FSM	ENSG00000168610.16	ENST00000264657.10	4921	24	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_23	70.0816159363462	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAGCATGGCAGCTCTGT	-31	True	NA	-12	True	AATAAA	-19	NA	42388442	42313323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_58819.known	chr17	-	4890	24	FSM	ENSG00000168610.16	ENST00000679014.1	4890	24	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	110.018506777943	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-19	True	NA	-42	True	NA	NA	NA	42388511	42313420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_58820.known	chr17	-	2772	24	FSM	ENSG00000168610.16	ENST00000588969.5	2772	24	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_23	89.9050959400658	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGGGGGGTGGCTAGAGG	10	True	NA	46	True	NA	NA	NA	42388482	42315490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_58834.known	chr17	-	1483	1	FSM	ENSG00000168610.16	ENST00000590776.1	1483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCACATTTATTTCCTT	-10	True	NA	NA	False	ATTAAA	-19	NA	42388421	42386938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42386900_42388400
transcript_58835.known	chr17	-	3395	24	FSM	ENSG00000168610.16	ENST00000677152.1	3395	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	161.998448031027	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTAACAGCCTCCTT	15	True	NA	NA	False	AAAAAG	-4	NA	42388477	42314847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42315801_42316788_42316890_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_58836.known	chr17	-	2633	24	FSM	ENSG00000168610.16	ENST00000404395.3	2633	24	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	122.695605953216	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGATCTGCTTTTAT	-3	True	NA	-22	True	AATAGA	-13	NA	42388414	42315558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_58837.known	chr17	-	3570	2	FSM	ENSG00000177469.13	ENST00000357037.6	3570	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTGATTGTATTCT	-1	True	NA	-1	True	AATAAA	-19	NA	42423256	42402448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42405389_42422626
transcript_58841.known	chr17	+	4110	21	FSM	ENSG00000033627.17	ENST00000264649.10	4110	21	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	46.9270710784298	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGTCACTGTGCCCA	-19	True	NA	24	True	AATAAA	-24	NA	42458879	42522582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_58842.known	chr17	+	3028	21	FSM	ENSG00000033627.17	ENST00000393829.6	3028	21	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_5	30.7318645708327	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGACTTTGAGTTCCCT	1773	False	NA	NA	False	NA	NA	NA	42458843	42521485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_58845.known	chr17	+	2774	20	FSM	ENSG00000033627.17	ENST00000537728.5	2774	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	63.3306409497211	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGAGCCAGTCTGCAT	-21	True	NA	NA	False	NA	NA	NA	42458877	42521394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_58847.known	chr17	+	1797	5	FSM	ENSG00000033627.17	ENST00000588629.1	1797	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_3	22.7087538187369	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGACTTGGTTGGGC	-41	True	NA	NA	False	NA	NA	NA	42458857	42471439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089
transcript_58857.known	chr17	+	1976	11	FSM	ENSG00000068120.15	ENST00000590958.5	1976	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	186.860509471638	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGCTCACCCTGGTT	-3	True	NA	NA	False	NA	NA	NA	42562150	42566037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42562220_42562355_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_58858.known	chr17	+	2071	10	FSM	ENSG00000068120.15	ENST00000421097.6	2071	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	152.072351201657	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAATGTTCTGAGATGT	-7	True	NA	0	True	NA	NA	NA	42562146	42566260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42562220_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_58863.known	chr17	+	2479	9	FSM	ENSG00000068120.15	ENST00000393818.3	2479	9	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	34.7922405142296	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	-6	True	NA	17	True	ATTAAA	-17	NA	42562147	42566277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_58876.known	chr17	-	2313	1	FSM	ENSG00000266962.2	ENST00000590513.2	2313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCCTGTCCTCTTTTC	19	True	NA	-1	True	AAAACA	-18	NA	42554748	42552435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42552400_42554700
transcript_58881.known	chr17	-	747	9	FSM	ENSG00000131470.15	ENST00000586337.5	747	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	183.126834461801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTGGCTTTTGTTG	21	True	NA	NA	False	NA	NA	NA	42577688	42572895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42574315_42574335_42577212_42577303_42577460_42577562_42577652
transcript_58885.known	chr17	+	2360	8	FSM	ENSG00000108788.12	ENST00000435881.7	2360	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	130.492317390562	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGCACTGCCTGTCA	-4	True	NA	10	True	AATAAA	-23	NA	42567099	42573203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567167_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_58889.known	chr17	+	2586	8	FSM	ENSG00000108788.12	ENST00000246912.8	2586	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	64.3979971801633	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567329_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_58892.known	chr17	-	1408	8	FSM	ENSG00000131470.15	ENST00000253789.9	1408	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	158.147696402923	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAATATGTAGTGCTGT	2905	False	NA	-23	True	AATAAA	-4	NA	42577831	42572322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573588_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_58894.known	chr17	-	902	8	FSM	ENSG00000131470.15	ENST00000588544.5	902	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	157.657598508118	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	2941	False	NA	NA	False	NA	NA	NA	42577795	42572961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577079_42577303_42577460_42577562_42577652
transcript_58895.known	chr17	-	1355	8	FSM	ENSG00000131470.15	ENST00000393795.8	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_7	87.357113654942	1951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-20	True	NA	-10	True	AATAAA	-17	NA	42577729	42572309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_58897.nic	chr17	-	1290	8	NIC	ENSG00000131470.15	novel	1355	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_4	122.700232024131	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	2975	False	NA	-10	True	AATAAA	-17	NA	42577761	42572309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460_42577562_42577652
transcript_58902.known	chr17	+	2334	7	FSM	ENSG00000108788.12	ENST00000346833.8	2334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	168.905052223629	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_58910.known	chr17	-	1244	7	FSM	ENSG00000131470.15	ENST00000589505.5	1244	7	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	76.9431608396744	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	2941	False	NA	NA	False	NA	NA	NA	42577795	42572961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42574211_42577212_42577303_42577460_42577562_42577652
transcript_58917.known	chr17	+	2537	6	FSM	ENSG00000108788.12	ENST00000590050.5	2537	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	179.391192648915	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	4	False	NA	46	True	NA	NA	NA	42567071	42573239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569607_42569981_42570184_42571546
transcript_58930.known	chr17	+	542	1	FSM	ENSG00000287710.1	ENST00000655617.1	542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGGCGCGCTTCTGT	558	False	NA	5	True	AATAAA	-15	NA	42577824	42578366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42577800_42578400
transcript_58931.known	chr17	+	2313	5	FSM	ENSG00000108788.12	ENST00000588320.1	2313	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	165.690977424844	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTAGCATTGTTCCAA	802	False	NA	38	True	AATAAA	-15	NA	42568076	42572705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42568944_42569203_42569304_42569506_42569607_42570096_42570184_42571546
transcript_58932.known	chr17	-	1381	7	FSM	ENSG00000131470.15	ENST00000587209.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_4	71.0297277358024	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	12	True	NA	-43	True	NA	NA	NA	42577697	42572342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460
transcript_58933.known	chr17	+	851	4	FSM	ENSG00000108788.12	ENST00000586393.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	162.516323966411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTAGCCATTGACTACAT	13	True	NA	-28	True	NA	NA	NA	42567116	42569499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567161_42567618_42567656_42568469_42568944_42569203
transcript_58935.known	chr17	-	3749	9	FSM	ENSG00000141699.11	ENST00000309428.10	3749	9	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_6	21.1035393950873	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGAGACTGATGCTG	0	True	NA	-37	True	AATAAA	-17	NA	42609374	42579514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42587833_42587865_42592055_42592163_42609085
transcript_58937.known	chr17	-	1632	8	FSM	ENSG00000141699.11	ENST00000586870.5	1632	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	78.0162201868618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGAAGTGAGAGTGTG	-12	True	NA	NA	False	NA	NA	NA	42609386	42581612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42592055_42592163_42609085
transcript_58942.known	chr17	+	1608	11	FSM	ENSG00000131462.9	ENST00000251413.8	1608	11	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_8	109.925611210491	2956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGCTCCCTTTAAAGC	-4	True	NA	15	True	AATAAA	-19	NA	42609682	42615238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
transcript_58943.known	chr17	+	1899	10	FSM	ENSG00000131462.9	ENST00000680678.1	1899	10	0	0	0	0	multi-exon	TRUE	canonical	3	1361	junction_7	99.9982715900013	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	196	False	NA	3	True	AATAAA	-7	NA	42609640	42615226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
transcript_58944.known	chr17	+	1719	10	FSM	ENSG00000131462.9	ENST00000681947.1	1719	10	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_8	113.26174209424	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	196	False	NA	1	True	AATAAA	-5	NA	42609640	42615224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614658_42614843
transcript_58945.known	chr17	+	1980	9	FSM	ENSG00000131462.9	ENST00000681490.1	1980	9	0	0	0	0	multi-exon	FALSE	canonical	3	1361	junction_7	100.786206273478	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	196	False	NA	1	True	AATAAA	-5	NA	42609640	42615224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
transcript_58946.known	chr17	+	1776	11	FSM	ENSG00000131462.9	ENST00000681413.1	1776	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	466.971101889614	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	196	False	NA	3	True	AATAAA	-7	NA	42609640	42615226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614137_42614259_42614413_42614495_42614658_42614843
transcript_58951.known	chr17	+	1782	11	FSM	ENSG00000037042.9	ENST00000251412.8	1782	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	161.0064905524	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	-3	True	NA	24	True	AATAAA	-26	NA	42659283	42667006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42662972_42663053_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_58952.nic	chr17	+	1713	10	NIC	ENSG00000037042.9	novel	1782	11	NA	NA	-11	0	combination_of_known_junctions	TRUE	canonical	3	30	junction_4	159.387020243878	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	-14	True	NA	24	True	AATAAA	-26	NA	42659272	42667006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_58958.nnic	chr17	-	759	3	NIC	ENSG00000068137.15	novel	2640	13	NA	NA	-1051	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	66	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	9858	False	NA	NA	False	AAAAAG	-18	NA	42670749	42667913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42668304_42669429_42669622_42670572
transcript_58961.known	chr17	-	4633	21	FSM	ENSG00000108799.13	ENST00000428826.7	4633	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	8.93084542470644	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAAGTTGTGTACTG	7	True	NA	-7	True	AATAAA	-14	NA	42745040	42700274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_58963.known	chr17	-	2501	20	FSM	ENSG00000108799.13	ENST00000592743.5	2501	20	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_19	10.6980724180856	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGACAGAGAGTTACAG	-2	True	NA	NA	False	NA	NA	NA	42745049	42702324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42745010
transcript_58965.nic	chr17	-	1521	9	NIC	ENSG00000108799.13	novel	2752	19	NA	NA	-4	-3	intron_retention	FALSE	canonical	3	24	junction_8	10.178869043268	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCATGTGGCACAGACTG	-6	True	NA	-1	True	AATAAA	-19	NA	42745053	42718008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_58967.nic	chr17	-	768	4	ISM	ENSG00000108799.13	ENST00000590082.1	565	5	-16	2833	-4	-2833	5prime_fragment	FALSE	canonical	3	24	junction_3	14.9666295470958	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGGAAATAAATA	-6	True	NA	NA	False	AAAAAG	-6	NA	42745053	42727257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_42727764_42728824_42728953_42730827_42730919_42745010
transcript_58969.known	chr17	+	345	1	FSM	ENSG00000239671.1	ENST00000479088.1	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAATGAAGTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	42714298	42714643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42714300_42714600
transcript_58970.known	chr17	-	1985	5	FSM	ENSG00000197291.9	ENST00000589716.5	1985	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.33012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGAGCAGTGTGAAG	64	False	NA	NA	False	NA	NA	NA	42761257	42753913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42755214_42759738_42759881_42760425_42760514_42760634_42760712_42760879
transcript_58972.known	chr17	+	858	4	FSM	ENSG00000131477.11	ENST00000589683.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	34.7083083233203	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	2	True	NA	9	True	AATAAA	-18	NA	42760774	42763041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42761013_42761833_42761900_42762354_42762464_42762596
transcript_58974.known	chr17	+	548	4	FSM	ENSG00000131477.11	ENST00000588928.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	57.3120115391762	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCACTTTGCCAACTGCT	32	False	NA	NA	False	NA	NA	NA	42760804	42762698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42761076_42761833_42761900_42762354_42762464_42762596
transcript_58975.known	chr17	+	549	4	FSM	ENSG00000131477.11	ENST00000587142.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.9702301823627	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACGAGCTTCTCAACAA	7	False	NA	NA	False	AGTAAA	-24	NA	42761257	42762854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42761359_42761833_42761900_42762339_42762464_42762596
transcript_58976.nnic	chr17	+	1005	4	NNC	ENSG00000131477.11	novel	752	4	NA	NA	91	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	62.9655990733565	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	98	False	NA	9	True	AATAAA	-18	NA	42761348	42763041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_42761734_42761833_42761900_42762354_42762464_42762596
transcript_58978.known	chr17	+	573	3	FSM	ENSG00000131477.11	ENST00000588576.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTGTAATCTTCAAAATA	7	False	NA	-30	True	NA	NA	NA	42761257	42763002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42761359_42761833_42761900_42762596
transcript_58981.known	chr17	+	1088	6	FSM	ENSG00000131475.7	ENST00000253794.7	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	1101	junction_3	43.4400736647626	8362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTCTTAAATTAC	-12	True	NA	29	True	ATTAAA	-14	NA	42773448	42779599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42773529_42773732_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
transcript_58982.known	chr17	-	780	2	FSM	ENSG00000183978.8	ENST00000328434.8	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_1	0	4801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGGCTGAGAGGCAG	-5	True	NA	-1	True	AATAAA	-28	NA	42798704	42797624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42798168_42798467
transcript_58998.known	chr17	-	2112	12	FSM	ENSG00000126581.13	ENST00000361523.8	2112	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	173.838150241363	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	10	True	NA	-12	True	AATAAA	-25	NA	42824263	42810133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
transcript_58999.known	chr17	-	2109	12	FSM	ENSG00000126581.13	ENST00000590099.6	2109	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	166.478946625156	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-9	True	NA	-12	True	AATAAA	-25	NA	42824282	42810133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
transcript_59.known	ERCC-00142	+	478	1	FSM	ERCC-00142A	DQ883646	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00142_+_0_500
transcript_59028.known	chr17	-	2504	11	FSM	ENSG00000126581.13	ENST00000543382.6	2504	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	174.500429798898	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCACTTAACAATATGAA	-14	True	NA	39	True	NA	NA	NA	42824287	42810413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42819610_42820773_42820842_42823747_42823880_42824154
transcript_59066.known	chr17	-	744	3	FSM	ENSG00000126581.13	ENST00000591307.5	744	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	161.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGAAAGAATTGTCAGT	20	True	NA	NA	False	NA	NA	NA	42824253	42820350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42820842_42823747_42823880_42824132
transcript_59067.known	chr17	-	557	3	FSM	ENSG00000126581.13	ENST00000593112.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	121.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTTGAAGCAGAATTA	13	True	NA	NA	False	TTTAAA	-16	NA	42824260	42820522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42820842_42823747_42823880_42824154
transcript_59070.known	chr17	+	3182	11	FSM	ENSG00000131467.12	ENST00000590720.6	3182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1429	junction_6	134.082661071445	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTCTGGTTTCCAAT	-29	True	NA	16	True	AATAAA	-25	NA	42833396	42843760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_59071.known	chr17	+	3144	11	FSM	ENSG00000131467.12	ENST00000293362.7	3144	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	516.524355669701	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTAGCCTTCTGGTTTCC	45	False	NA	13	True	AATAAA	-22	NA	42833470	42843757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838691_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_59072.known	chr17	+	1018	8	FSM	ENSG00000131467.12	ENST00000591152.5	1018	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	577.224569887347	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTAGGGCTGCTTGGGCT	-7	True	NA	NA	False	NA	NA	NA	42833418	42839009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42833940_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944
transcript_59073.known	chr17	-	1958	6	FSM	ENSG00000213373.7	ENST00000301683.7	1958	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGTGGTCTGGAGAAA	0	True	NA	NA	False	ATTAAA	-22	NA	42898704	42874669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42874864_42877974_42878074_42878526_42879819_42894565_42894635_42897686_42897919_42898632
transcript_59074.known	chr17	-	2042	18	FSM	ENSG00000108825.18	ENST00000409399.6	2042	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_17	138.035274564951	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGTTGCGCTACCACT	801	False	NA	-35	True	AATAAA	-13	NA	42980490	42950529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045_42980276_42980365
transcript_59075.known	chr17	-	1790	17	FSM	ENSG00000108825.18	ENST00000360221.8	1790	17	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_16	136.493990252318	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	1288	False	NA	-31	True	AATAAA	-17	NA	42980003	42950525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42979904
transcript_59087.known	chr17	-	1446	6	FSM	ENSG00000267060.7	ENST00000424284.5	1446	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	18.4867520132661	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGGTAAACTATTAGGA	1627	False	NA	2	True	AATAAA	-29	NA	42979664	42968087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979627
transcript_59090.known	chr17	-	1320	12	FSM	ENSG00000266967.7	ENST00000427569.7	1320	12	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_11	29.9740934974143	2870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	4	True	NA	-31	True	AATAAA	-17	NA	42964454	42950525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_59091.known	chr17	-	1543	7	FSM	ENSG00000267060.7	ENST00000591916.7	1543	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	10.3077640640442	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCTCTTGAACTCAT	0	True	NA	-13	True	AATAAA	-14	NA	42980080	42968102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_59092.known	chr17	-	562	5	FSM	ENSG00000266967.7	ENST00000591096.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	130.667517004036	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	8512	False	NA	-31	True	AATAAA	-17	NA	42955946	42950525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42950729_42951799_42951895_42954875_42954968_42955157_42955225_42955841
transcript_59093.known	chr17	-	2150	17	FSM	ENSG00000108825.18	ENST00000421990.7	2150	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	133.940037306811	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATAAAATAGATTGACTC	763	False	NA	-55	True	NA	NA	NA	42980528	42950549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_59094.known	chr17	-	752	7	FSM	ENSG00000266967.7	ENST00000430739.5	752	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	104.017092612491	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGAAGTGGATGGAGAG	NA	False	NA	NA	False	AAAAAG	-37	NA	42964498	42955900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964442
transcript_59101.known	chr17	+	598	5	FSM	ENSG00000131469.15	ENST00000590864.2	598	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5135.48960664901	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATTATAAAGAAAAAAA	139	False	NA	43	True	NA	NA	NA	42998689	43002939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998832_42999185_42999293_42999932_43000103_43002672_43002784_43002871
transcript_59108.known	chr17	+	460	4	FSM	ENSG00000131469.15	ENST00000586277.5	460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4894.8644062482	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGAAAAAAAGCCTGTG	22	False	NA	50	True	ATTAAA	-5	NA	42998808	43002946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998913_42999932_43000103_43002672_43002784_43002871
transcript_59112.known	chr17	+	505	5	FSM	ENSG00000131469.15	ENST00000253788.12	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	6211	junction_1	2029.62428789173	153784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	-3	True	NA	63	True	ATTAAA	-18	NA	42998418	43002959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998472_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_59113.known	chr17	+	730	4	FSM	ENSG00000131469.15	ENST00000589913.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	8517	junction_3	1257.51112210677	72149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	-2	True	NA	63	True	ATTAAA	-18	NA	42998470	43002959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998832_42999932_43000103_43002672_43002784_43002871
transcript_59114.known	chr17	+	585	5	FSM	ENSG00000131469.15	ENST00000589037.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	4501.65866653615	5152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAAAGCCTGTGTCT	2	True	NA	53	True	ATTAAA	-8	NA	42998272	43002949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998416_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_59115.known	chr17	+	318	4	FSM	ENSG00000131469.15	ENST00000588830.1	318	4	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_2	3474.12860377326	4281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	14	True	NA	63	True	ATTAAA	-18	NA	42998435	43002959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998472_42998748_42998832_43002672_43002784_43002871
transcript_59116.known	chr17	+	1872	3	FSM	ENSG00000131469.15	ENST00000593262.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	8517	junction_2	1525	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	-3	True	NA	52	True	ATTAAA	-7	NA	42998418	43002948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43000103_43002672_43002784_43002871
transcript_59119.known	chr17	+	1182	7	FSM	ENSG00000068079.8	ENST00000415816.7	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	8.75595035770913	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	9	True	NA	20	True	AGTAAA	-17	NA	43006783	43014456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013374_43013475_43013663_43013775_43013883_43014107
transcript_59121.known	chr17	-	2699	6	FSM	ENSG00000108828.16	ENST00000355653.8	2699	6	0	0	0	0	multi-exon	TRUE	canonical	3	1736	junction_1	58.2237065120385	1975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	-10	True	NA	-10	True	AATAAA	-14	NA	43022385	43014606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021935
transcript_59122.nnic	chr17	-	2396	6	NNC	ENSG00000108828.16	novel	2699	6	NA	NA	-2563	0	intron_retention	FALSE	canonical	2	5	junction_5	729.609045996553	1923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	NA	False	NA	-10	True	AATAAA	-14	NA	43027686	43014606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43027539
transcript_59142.known	chr17	+	4162	5	FSM	ENSG00000108830.10	ENST00000587250.4	4162	5	0	0	0	0	multi-exon	TRUE	canonical	3	748	junction_1	138.34558178706	2892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCAGAGTTTCTGTG	-4	True	NA	12	True	AATAAA	-19	NA	43025230	43032041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43025450_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_59151.known	chr17	+	503	2	FSM	ENSG00000108830.10	ENST00000587117.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTGAGCCCCTCAGCTG	6	True	NA	NA	False	NA	NA	NA	43025240	43026253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43025450_43025959
transcript_59152.known	chr17	-	2379	23	FSM	ENSG00000012048.23	ENST00000491747.6	2379	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	23.9239497554402	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGCCAGCCACAGGTAC	22	True	NA	NA	False	NA	NA	NA	43125356	43045677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43082403_43082576_43090943_43091033_43094743_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_59161.known	chr17	-	4497	10	FSM	ENSG00000012048.23	ENST00000354071.7	4497	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	17.3909299476608	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCAAGTTGCAGCGT	162	False	NA	NA	False	AGTAAA	-27	NA	43125315	43091097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_59162.known	chr17	-	1612	10	FSM	ENSG00000012048.23	ENST00000494123.5	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	17.7770833197694	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGCCATGTAACTGAAAA	27	False	NA	NA	False	NA	NA	NA	43125450	43094111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_59164.known	chr17	-	2108	10	FSM	ENSG00000012048.23	ENST00000470026.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	23.7585592114183	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAGAAAAAAAAGTACAA	1	True	NA	NA	False	NA	NA	NA	43125323	43093583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125181
transcript_59180.nic	chr17	-	1010	6	NIC	ENSG00000012048.23	novel	558	7	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_5	24.8708664907357	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCCTGAACATCTAAAAG	-11	True	NA	NA	False	AAAAAG	-9	NA	43125389	43104224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43124736
transcript_59182.known	chr17	-	7270	24	FSM	ENSG00000012048.23	ENST00000471181.7	7270	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	27.8868900908904	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	-6	True	NA	-5	True	AATAAA	-21	NA	43125483	43044294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43079333_43079400_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_59196.known	chr17	-	718	2	FSM	ENSG00000012048.23	ENST00000618469.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCATCTGGTAAGTCAGCA	14	True	NA	NA	False	NA	NA	NA	43125364	43124025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43124116_43124736
transcript_59198.known	chr17	+	4613	21	FSM	ENSG00000188554.15	ENST00000590996.6	4613	21	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_11	22.3049321899888	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGACTGGCTAGTCCTTG	3	True	NA	28	True	AATAAA	-19	NA	43171213	43211688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43202654_43202713_43203680_43203787_43209900
transcript_59202.nic	chr17	+	2749	17	ISM	ENSG00000188554.15	ENST00000589872.1	3097	21	-54	9091	-13	4646	5prime_fragment	FALSE	canonical	3	157	junction_11	23.239160779813	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATTCTGGATTTAA	-22	True	NA	10	True	AATAAA	-18	NA	43171188	43200766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166
transcript_59214.known	chr17	+	1344	5	FSM	ENSG00000198496.12	ENST00000460115.5	1344	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.672315572906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAAGGGGAGCAAAGGG	13	True	NA	18	True	GATAAA	-27	NA	43125609	43145113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43125771_43131207_43131271_43138656_43138923_43139815_43140284_43144727
transcript_59215.nic	chr17	+	1036	5	NIC	ENSG00000198496.12	novel	1344	5	NA	NA	29	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	17.7675969112314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	-17	True	NA	-14	True	NA	NA	NA	43125579	43153649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_43125771_43131207_43131271_43138656_43138923_43139815_43140284_43153601
transcript_59218.nnic	chr17	+	687	5	NNC	ENSG00000198496.12	novel	1344	5	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	17.0953209972788	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	-17	True	NA	-14	True	NA	NA	NA	43125579	43153649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_43125771_43131207_43131271_43138656_43138923_43140164_43140284_43153601
transcript_59227.known	chr17	+	978	4	FSM	ENSG00000198496.12	ENST00000356906.7	978	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	16.7597401199687	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTTTTGTGAGC	-9	True	NA	15	True	AATAAA	-22	NA	43125639	43140333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43125771_43131207_43131271_43138656_43138923_43139815
transcript_59228.nnic	chr17	+	686	4	NNC	ENSG00000198496.12	novel	978	4	NA	NA	29	-3	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	15.4128373622625	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTCCTGGGTTTTGTG	-17	True	NA	12	True	AATAAA	-19	NA	43125579	43140330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_43125771_43131207_43131271_43138656_43138923_43140164
transcript_59234.nnic	chr17	+	621	4	NNC	ENSG00000198496.12	novel	1895	3	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	2.16024689946929	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	-14	True	NA	-14	True	NA	NA	NA	43125582	43153649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_43125771_43138656_43138923_43140164_43140284_43153601
transcript_59244.nic	chr17	+	1928	3	ISM	ENSG00000198496.12	ENST00000356906.7	978	4	-60	3	29	-3	intron_retention	FALSE	canonical	3	36	junction_2	6	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTCCTGGGTTTTGTG	-17	True	NA	12	True	AATAAA	-19	NA	43125579	43140330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43125771_43131207_43131271_43138656
transcript_59251.known	chr17	-	5084	3	FSM	ENSG00000267002.4	ENST00000590740.2	5084	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCGGTGTCTGAGGAGTT	846	False	NA	-7	True	AATAAA	-15	NA	43170403	43160289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43164813_43166979_43167263_43170125
transcript_59253.nnic	chr17	-	958	3	NIC	ENSG00000267002.4	novel	1782	4	NA	NA	9	2	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	3	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	855	False	NA	0	True	ATTAAA	-20	NA	43170394	43148365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43148784_43166979_43167251_43170125
transcript_59254.nnic	chr17	-	950	3	NIC	ENSG00000267002.4	novel	1782	4	NA	NA	29	2	combination_of_known_splicesites	TRUE	canonical	2	4	junction_2	2.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	875	False	NA	0	True	ATTAAA	-20	NA	43170374	43148365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43148784_43166979_43167263_43170125
transcript_59256.known	chr17	+	964	2	FSM	ENSG00000188554.15	ENST00000592304.1	964	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGGATTCAGAAAGAAGT	14	True	NA	NA	False	NA	NA	NA	43171224	43176676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43171303_43175790
transcript_59257.known	chr17	-	2406	2	FSM	ENSG00000267002.4	ENST00000634503.1	2406	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGTTATCATCTTCGA	808	False	NA	NA	False	AAAAAG	-15	NA	43170441	43165759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43167850_43170125
transcript_59258.known	chr17	+	1895	3	FSM	ENSG00000198496.12	ENST00000657841.1	1895	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	NA	False	NA	-14	True	NA	NA	NA	43125550	43153649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43125771_43138656_43140284_43153601
transcript_59260.nic	chr17	+	896	4	ISM	ENSG00000184988.8	ENST00000612339.4	3266	9	-70	5836	-30	209	5prime_fragment	FALSE	canonical	3	6	junction_2	2.86744175568088	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43211804	43214205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43211923_43212226_43212395_43213020_43213253_43213827
transcript_59263.nic	chr17	+	705	3	ISM	ENSG00000184988.8	ENST00000536052.5	1181	7	-47	4060	-7	209	5prime_fragment	FALSE	canonical	0	0	junction_1	6.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43211827	43214205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43211923_43213020_43213253_43213827
transcript_59264.nic	chr17	+	1174	3	NIC	ENSG00000184988.8	novel	639	4	NA	NA	-4	209	intron_retention	FALSE	canonical	3	6	junction_1	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	43211830	43214205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_43212395_43213020_43213253_43213827
transcript_59277.known	chr17	-	191	1	FSM	ENSG00000274585.1	ENST00000618664.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43233977	43233786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43233800_43234000
transcript_59278.known	chr17	-	191	1	FSM	ENSG00000278048.1	ENST00000613119.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43252019	43251828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43251800_43252000
transcript_59279.known	chr17	-	191	1	FSM	ENSG00000274432.1	ENST00000619465.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43245864	43245673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43245700_43245900
transcript_59280.known	chr17	-	191	1	FSM	ENSG00000276596.1	ENST00000613778.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	6467	False	NA	NA	False	NA	NA	NA	43266823	43266632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43266600_43266800
transcript_59281.known	chr17	-	191	1	FSM	ENSG00000277903.1	ENST00000611544.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	1731	False	NA	NA	False	NA	NA	NA	43271559	43271368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43271400_43271600
transcript_59282.known	chr17	-	191	1	FSM	ENSG00000274062.1	ENST00000617785.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43284329	43284138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43284100_43284300
transcript_59283.known	chr17	-	192	1	FSM	ENSG00000278774.1	ENST00000613956.1	192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	-2	False	NA	NA	False	NA	NA	NA	43273292	43273100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43273100_43273300
transcript_59284.known	chr17	-	191	1	FSM	ENSG00000275219.1	ENST00000620268.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43296615	43296424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43296400_43296600
transcript_59285.known	chr17	-	191	1	FSM	ENSG00000278591.1	ENST00000618602.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43300231	43300040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43300000_43300200
transcript_59286.known	chr17	+	3266	9	FSM	ENSG00000184988.8	ENST00000612339.4	3266	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	3.15980616494113	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTGGGAGTGGGAAGG	-7	True	NA	NA	False	AATAAA	-25	NA	43211874	43220041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43211923_43212226_43212395_43213020_43213253_43213827_43213892_43215787_43215942_43216448_43216590_43216696_43216741_43217258_43217313_43217680
transcript_59290.known	chr17	-	1083	5	FSM	ENSG00000188825.15	ENST00000658754.1	1083	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.87228132326901	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATAGTTACCATCTCAT	859	False	NA	NA	False	AATAAA	-27	NA	43388350	43371076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43371427_43377670_43377814_43379122_43379263_43381272_43381661_43388288
transcript_59291.known	chr17	-	874	5	FSM	ENSG00000188825.15	ENST00000656704.1	874	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.67423461417477	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTGCGTGAATTACTC	9	True	NA	NA	False	AATAAA	-21	NA	43388314	43375929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43376107_43377670_43377814_43379122_43379263_43381272_43381661_43388288
transcript_59299.nnic	chr17	-	1120	3	Fusion	ENSG00000188825.15_ENSG00000279602.1	novel	1186	3	NA	NA	-1	0	multi-exon	FALSE	canonical	2	13	junction_2	2	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAAGCTGTCTCTCCT	-5	True	NA	NA	False	ATTAAA	-23	NA	43361362	43338740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr17_-_43339505_43341177_43341460_43361288
transcript_59303.nnic	chr17	-	589	3	Fusion	ENSG00000188825.15_ENSG00000279602.1	novel	1186	3	NA	NA	-1	14	multi-exon	FALSE	canonical	2	13	junction_2	2	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTAGTAATTACTCTTT	-5	True	NA	NA	False	TATAAA	-16	NA	43361362	43339271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr17_-_43339505_43341177_43341460_43361288
transcript_59306.nnic	chr17	-	530	3	Fusion	ENSG00000188825.15_ENSG00000279602.1	novel	1186	3	NA	NA	-1	-45	multi-exon	FALSE	canonical	2	13	junction_2	2	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGTTATACTGATATAG	-5	True	NA	NA	False	AATAAA	-14	NA	43361362	43339330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr17_-_43339505_43341177_43341460_43361288
transcript_59307.known	chr17	-	1321	1	FSM	ENSG00000279602.1	ENST00000624705.1	1321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCGGACTTGCCCTGAGT	-4	True	NA	NA	False	AATAAA	-17	NA	43361361	43360040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43360000_43361400
transcript_59308.known	chr17	-	2438	4	FSM	ENSG00000188825.15	ENST00000592135.5	2438	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGCGTGAATTACTCTT	11	True	NA	NA	False	AATAAA	-23	NA	43388312	43375927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43377814_43379122_43379263_43381272_43381661_43388288
transcript_59311.known	chr17	+	1578	2	FSM	ENSG00000175906.5	ENST00000320033.5	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_1	0	2585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATCTCTGTAGTTTT	0	True	NA	6	True	NA	NA	NA	43398992	43401137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43399094_43399660
transcript_59313.known	chr17	+	5549	23	FSM	ENSG00000067596.12	ENST00000262415.8	5549	23	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_22	22.1231059795368	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCTAGGCTGGCATCA	-14	True	NA	NA	False	NA	NA	NA	43483974	43525670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43523627
transcript_59314.known	chr17	+	3809	23	FSM	ENSG00000067596.12	ENST00000540306.5	3809	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_22	45.6741287060613	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGTTTTTAAAATTT	-26	True	NA	11	True	ATTAAA	-13	NA	43483962	43526786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43526495
transcript_59317.nic	chr17	+	486	4	ISM	ENSG00000067596.12	ENST00000262415.8	5549	23	-82	34472	28	705	5prime_fragment	FALSE	canonical	3	200	junction_1	3.39934634239519	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAGGAACTCTTCCCAG	8	False	NA	NA	False	AAAAAG	-5	NA	43483892	43491198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164
transcript_59318.known	chr17	+	590	4	FSM	ENSG00000067596.12	ENST00000592258.5	590	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	95.3950848955135	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCCTTAGTGTCCTGT	NA	False	NA	NA	False	NA	NA	NA	43483864	43492292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43484186_43490390_43490464_43491164_43491251_43492182
transcript_59319.known	chr17	+	235	3	FSM	ENSG00000067596.12	ENST00000605777.1	235	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	4	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATGGTGTAGGTTTTG	151	False	NA	NA	False	NA	NA	NA	43484139	43490493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43484186_43489448_43489535_43490390
transcript_5932.known	chr1	+	3831	4	FSM	ENSG00000240563.2	ENST00000498273.2	3831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1730	junction_1	54.2913948573395	5162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATACTGTTTGCTTA	-12	True	NA	26	True	ATTAAA	-16	NA	62194848	62212328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62194922_62196434_62196529_62206518_62207637_62209782
transcript_59322.known	chr17	-	1727	13	FSM	ENSG00000175832.13	ENST00000591713.5	1727	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	168.404522900465	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAATGGCAAGTCTAGA	1	True	NA	NA	False	NA	NA	NA	43545899	43528336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43545860
transcript_59326.nic	chr17	-	2279	11	ISM	ENSG00000175832.13	ENST00000393664.6	2182	12	95	-2	95	0	intron_retention	TRUE	canonical	3	587	junction_7	26.9992592490979	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	6	True	NA	-4	True	AATAAA	-20	NA	43545576	43527843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273
transcript_59328.nnic	chr17	-	2231	10	NIC	ENSG00000175832.13	novel	2147	12	NA	NA	95	0	intron_retention	TRUE	canonical	3	26	junction_9	190.162763292948	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	6	True	NA	-4	True	AATAAA	-20	NA	43545576	43527843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43545273
transcript_59332.known	chr17	-	2182	12	FSM	ENSG00000175832.13	ENST00000393664.6	2182	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_11	75.4757910943788	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	-8	True	NA	-6	True	AATAAA	-18	NA	43545671	43527845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557
transcript_59333.nic	chr17	-	1315	4	NIC	ENSG00000108861.9	novel	1019	4	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	49.6051072639367	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGGTATTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-11	NA	43779000	43766130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_59334.nic	chr17	-	944	4	NIC	ENSG00000108861.9	novel	2077	4	NA	NA	-23	10	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	49.6051072639367	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTACTGATCTTCAA	NA	False	NA	NA	False	TTTAAA	-13	NA	43779000	43766501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_59335.known	chr17	-	4095	3	FSM	ENSG00000108861.9	ENST00000226004.8	4095	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	4	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTTTTTTTGTCCTT	-11	True	NA	NA	False	AATAAA	-17	NA	43778977	43766124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43769815_43774711_43774939_43778799
transcript_59343.nic	chr17	-	895	3	NIC	ENSG00000108861.9	novel	3666	3	NA	NA	-23	1239	combination_of_known_junctions	FALSE	canonical	3	4	junction_1	61.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCACATCTCATTGGCT	NA	False	NA	NA	False	AGTAAA	-17	NA	43779000	43773642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43774110_43774711_43774939_43778799
transcript_59345.known	chr17	-	2186	19	FSM	ENSG00000161647.19	ENST00000496503.5	2186	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	4.04450549404473	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTAGCCACTGTCTTT	-10	True	NA	3	True	ATTAAA	-39	NA	43833170	43801417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_59352.known	chr17	-	4206	12	FSM	ENSG00000108852.16	ENST00000377184.7	4206	12	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_7	18.5142339702223	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGCTCTGCTTTTCTTT	22	True	NA	-1	True	ATTAAA	-16	NA	43900598	43875356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_59355.nic	chr17	-	1106	8	ISM	ENSG00000108852.16	ENST00000377184.7	4206	12	-51	5763	-51	1225	5prime_fragment	FALSE	canonical	3	157	junction_3	21.0809905665105	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGTATTTGACCACC	9017	False	NA	NA	False	AAAAAG	-5	NA	43900649	43881119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_59356.known	chr17	-	445	2	FSM	ENSG00000282199.1	ENST00000591374.5	445	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTTGTGAGTTATC	9990	False	NA	NA	False	ATTAAA	-16	NA	43917399	43914432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43914771_43917292
transcript_59357.nnic	chr17	-	1130	2	NNC	ENSG00000282199.1	novel	445	2	NA	NA	-529	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTGTGAGTTATCA	9461	False	NA	NA	False	ATTAAA	-17	NA	43917928	43914431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_43914771_43917137
transcript_59359.known	chr17	+	434	2	FSM	ENSG00000261514.2	ENST00000565120.2	544	2	106	4	106	-4	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGACTTCTGTGGGCC	74	False	NA	3	True	AATAAA	-17	NA	43938362	43938959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43938398_43938560
transcript_59361.known	chr17	-	580	3	FSM	ENSG00000131096.11	ENST00000592796.2	728	3	0	148	0	-148	multi-exon	FALSE	canonical	3	14	junction_1	7	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAAACCCGGATTCTGCC	-2	True	NA	NA	False	NA	NA	NA	43953940	43952888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43953190_43953295_43953484_43953849
transcript_59363.nic	chr17	+	1352	5	ISM	ENSG00000161653.11	ENST00000293404.8	2114	7	1347	74	-79	-66	3prime_fragment	FALSE	canonical	3	23	junction_3	9.02773504263389	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCATTTTAATTCCTTT	456	False	NA	16	True	NA	NA	NA	44005968	44008994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_44006238_44006528_44006710_44007322_44007495_44007590_44007774_44008447
transcript_59364.nic	chr17	+	1426	5	ISM	ENSG00000161653.11	ENST00000293404.8	2114	7	1347	0	-79	0	3prime_fragment	FALSE	canonical	3	23	junction_3	9.02773504263389	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGCTTACACTTGAAAGA	456	False	NA	19	True	ATTAAA	-21	NA	44005968	44009068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_44006238_44006528_44006710_44007322_44007495_44007590_44007774_44008447
transcript_59366.known	chr17	+	1955	4	FSM	ENSG00000161653.11	ENST00000592915.1	1955	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	10.077477638554	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGTCAGCTTACACTTG	-2	True	NA	14	True	ATTAAA	-16	NA	44006047	44009063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44006238_44006528_44007495_44007590_44007774_44008447
transcript_59370.known	chr17	-	1525	4	FSM	ENSG00000091947.10	ENST00000206380.8	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	6.34209919681348	1024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTGCTTTTCTGTT	20	True	NA	0	True	AATAAA	-16	NA	44014963	44011187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44012237_44013008_44013156_44014356_44014538_44014815
transcript_59394.known	chr17	+	1718	7	FSM	ENSG00000141349.9	ENST00000588558.5	1718	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	397.040999842026	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCGGCCCCAATAAAGCC	9	True	NA	-10	True	NA	NA	NA	44070749	44076310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44071184_44071627_44071822_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_59397.known	chr17	+	1572	6	FSM	ENSG00000141349.9	ENST00000585361.5	1572	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	315.830080897941	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCAGCCAGGGCGGCCC	10	True	NA	-20	True	NA	NA	NA	44070750	44076300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44071243_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_59405.known	chr17	+	1573	6	FSM	ENSG00000141349.9	ENST00000269097.9	1573	6	0	0	0	0	multi-exon	TRUE	canonical	3	771	junction_4	44.001818144254	7261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTTTCTTGCCTATGC	-6	True	NA	24	True	AATAAA	-18	NA	44070734	44076344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_59414.known	chr17	+	2698	10	FSM	ENSG00000125319.15	ENST00000585683.6	2698	10	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_4	27.0573236930798	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-1	True	NA	14	True	AATAAA	-14	NA	44141929	44162476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_59420.known	chr17	+	2272	7	FSM	ENSG00000125319.15	ENST00000245382.6	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	49.6770123453047	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	-14	True	NA	14	True	AATAAA	-14	NA	44142021	44162476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44161870
transcript_59426.nic	chr17	-	1111	4	NIC	ENSG00000267080.7	novel	2024	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	13.4412301024373	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAATATTTTCTTTCTG	-8	True	NA	-14	True	AATAAA	-6	NA	44186717	44175967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_44176643_44181622_44181742_44182929_44183094_44186564
transcript_59429.known	chr17	-	916	3	FSM	ENSG00000267080.7	ENST00000588785.6	916	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	6.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAATATTTTCTTTCTG	2	True	NA	-14	True	AATAAA	-6	NA	44186707	44175967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44176643_44181622_44181721_44186564
transcript_59431.known	chr17	-	1827	3	FSM	ENSG00000267080.7	ENST00000667107.1	1827	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTACTCTGTCTCCACC	-5	True	NA	NA	False	NA	NA	NA	44186714	44176436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44176643_44181622_44183094_44186564
transcript_59440.nnic	chr17	-	670	2	Genic_Genomic	ENSG00000267080.7	novel	916	3	NA	NA	-9	1119	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCGGTGTCTAGCTTCTT	-23	True	NA	NA	False	TATAAA	-21	NA	44186732	44185266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr17_-_44185492_44186287
transcript_59442.known	chr17	-	4795	21	FSM	ENSG00000108312.15	ENST00000436088.6	4795	21	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_20	88.279938264591	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTGCTGTCTGGTC	-1	True	NA	-12	True	AATAAA	-13	NA	44219675	44205039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_59444.known	chr17	-	4997	21	FSM	ENSG00000108312.15	ENST00000302904.8	4997	21	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	99.1516389173674	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGTCACTGGAA	476	False	NA	-5	True	AATAAA	-20	NA	44221626	44205032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212343_44212455_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44221200
transcript_59445.known	chr17	-	2683	20	FSM	ENSG00000108312.15	ENST00000393606.7	2683	20	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_19	77.2329641275177	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATACGG	2352	False	NA	NA	False	NA	NA	NA	44219750	44207115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_59446.known	chr17	-	4684	20	FSM	ENSG00000108312.15	ENST00000343638.9	4684	20	0	0	0	0	multi-exon	TRUE	canonical	3	113	junction_19	83.9887210472805	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGTCACTGGAA	1139	False	NA	-5	True	AATAAA	-20	NA	44220963	44205032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_59449.known	chr17	-	2459	19	FSM	ENSG00000108312.15	ENST00000526094.5	2459	19	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_13	58.7473403653306	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCCCACCCCAGGGCA	3600	False	NA	NA	False	NA	NA	NA	44218502	44207239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171
transcript_59463.known	chr17	+	2202	4	FSM	ENSG00000168591.16	ENST00000538716.7	2202	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	48.3321838943783	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGCGTGAGCCCCAC	-10	True	NA	NA	False	AATAAA	-14	NA	44186971	44191929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187110_44187675_44187744_44189021_44189589_44190500
transcript_59482.known	chr17	+	1569	3	FSM	ENSG00000168591.16	ENST00000590235.5	1569	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTTCTGTGACAGAGA	15	False	NA	16	True	AATAAA	-22	NA	44187049	44191731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187110_44189021_44189300_44190500
transcript_59483.known	chr17	+	1921	3	FSM	ENSG00000168591.16	ENST00000357984.7	1921	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	50.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	4	True	NA	15	True	AATAAA	-21	NA	44186985	44191730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187110_44189021_44189589_44190500
transcript_59488.known	chr17	+	1837	3	FSM	ENSG00000168591.16	ENST00000589184.5	1837	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTTTGTGGTCCTGCA	40	True	NA	-4	True	AATAAA	-2	NA	44187274	44191711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187744_44188934_44189092_44190500
transcript_59489.nic	chr17	+	2145	3	NIC	ENSG00000168591.16	novel	2151	4	NA	NA	-11	0	intron_retention	FALSE	canonical	3	14	junction_2	11.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTTCTGTGACAGAGA	-40	True	NA	16	True	AATAAA	-22	NA	44187194	44191731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_44187744_44188934_44189300_44190500
transcript_59490.known	chr17	+	2418	3	FSM	ENSG00000168591.16	ENST00000319511.6	2418	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	38.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	-29	True	NA	11	True	AATAAA	-17	NA	44187205	44191726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187744_44188934_44189589_44190500
transcript_59493.known	chr17	+	1918	3	FSM	ENSG00000168591.16	ENST00000589785.1	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	47	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTGTGGTCCTGCAG	27	True	NA	-3	True	AATAAA	-3	NA	44187261	44191712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187401_44189021_44189589_44190500
transcript_59496.nic	chr17	+	2026	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	-3	0	intron_retention	FALSE	canonical	3	32	junction_1	41	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	-32	True	NA	15	True	AATAAA	-21	NA	44187202	44191730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_44187432_44189021_44189589_44190500
transcript_59499.known	chr17	+	1505	2	FSM	ENSG00000168591.16	ENST00000589856.1	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	419	False	NA	NA	False	NA	NA	NA	44187653	44190349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187744_44188934
transcript_59501.known	chr17	+	1598	2	FSM	ENSG00000168591.16	ENST00000587172.1	1598	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTTCTGTGACAGAGA	1698	False	NA	16	True	AATAAA	-22	NA	44188932	44191731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44189300_44190500
transcript_59502.known	chr17	-	3010	20	FSM	ENSG00000108312.15	ENST00000527034.5	3010	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.753831045118	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCGGCTGCCGTCTCTGT	20	True	NA	NA	False	NA	NA	NA	44220854	44206593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44207368_44207453_44207598_44207702_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_59503.known	chr17	+	2005	11	FSM	ENSG00000108309.14	ENST00000426726.8	2005	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	5.77581163127746	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCCTTGTATGTGGGG	0	True	NA	13	True	AATAAA	-15	NA	44308600	44318670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44308940_44312579_44312696_44313103_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44318095
transcript_59505.known	chr17	+	3686	10	FSM	ENSG00000108309.14	ENST00000587483.5	3686	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.24400947476761	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGCCTTGTATGTGGG	1901	False	NA	12	True	AATAAA	-14	NA	44310703	44318669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44311514_44312579_44312696_44313118_44313253_44313417_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316389_44316523_44316618_44316726_44318095
transcript_59508.known	chr17	-	2100	4	FSM	ENSG00000267750.6	ENST00000586388.1	2100	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATCATTT	45	False	NA	NA	False	NA	NA	NA	44308393	44302516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44304208_44304980_44305044_44307291_44307501_44308256
transcript_59513.known	chr17	-	696	3	FSM	ENSG00000267750.6	ENST00000655016.1	696	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGAGGCAGGTGGATCA	162	False	NA	NA	False	NA	NA	NA	44308276	44303740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44304208_44307291_44307501_44308256
transcript_59514.known	chr17	+	746	2	FSM	ENSG00000108309.14	ENST00000588564.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCCTTGTATGTGGGG	94	False	NA	13	True	AATAAA	-15	NA	44316554	44318670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44316726_44318095
transcript_59519.known	chr17	-	1581	12	FSM	ENSG00000013306.16	ENST00000377095.10	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_8	501.50864959623	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	-13	True	NA	NA	False	NA	NA	NA	44324823	44319627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322553_44322807_44322853_44323283_44323344_44323477_44323578_44324710
transcript_59520.known	chr17	-	1542	12	FSM	ENSG00000013306.16	ENST00000590194.5	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	669.995263335915	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGAACTTCTGCCTG	1	True	NA	NA	False	NA	NA	NA	44324809	44319641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323591_44324710
transcript_59526.known	chr17	+	2130	13	FSM	ENSG00000030582.18	ENST00000053867.8	2130	13	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	125.616700942015	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	-1	True	NA	30	True	AATAAA	-19	NA	44345301	44353106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_59539.known	chr17	+	1632	9	FSM	ENSG00000030582.18	ENST00000589265.5	1632	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	367.113997962486	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTTGTACACTTTC	2	True	NA	6	True	NA	NA	NA	44345304	44353082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_59544.known	chr17	+	535	3	FSM	ENSG00000030582.18	ENST00000587109.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	503.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGCCCACTGCTCTGCC	0	True	NA	NA	False	NA	NA	NA	44345264	44349474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44345606_44349157_44349303_44349425
transcript_59546.known	chr17	-	2618	25	FSM	ENSG00000005961.19	ENST00000648408.1	2618	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	9.90370301116372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	15	True	NA	-35	True	AATAAA	-17	NA	44385340	44372179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44372424_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084_44376185_44376307_44376389_44377008_44377089_44377697_44377791_44378361_44378510_44378642_44378711_44379688_44379815_44380001_44380154_44380245_44380302_44380385_44380491_44380599_44380646_44380878_44381062_44383492_44383705_44383893_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385210_44385285
transcript_59552.nic	chr17	-	995	7	ISM	ENSG00000005961.19	ENST00000262407.6	3479	30	13425	0	-40	0	3prime_fragment	FALSE	canonical	3	23	junction_3	11.5854314646552	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	9131	False	NA	-36	True	AATAAA	-16	NA	44376224	44372180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_44372424_44374353_44374471_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084
transcript_59554.nnic	chr17	-	893	6	NIC	ENSG00000005961.19	novel	3479	30	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	12.2539789456323	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	9131	False	NA	-36	True	AATAAA	-16	NA	44376224	44372180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_44372424_44374353_44374471_44374997_44375112_44375590_44375717_44375832_44375986_44376084
transcript_59557.known	chr17	-	461	5	FSM	ENSG00000005961.19	ENST00000592075.5	461	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	3.60555127546399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGGCATTCAGTGGC	4442	False	NA	NA	False	NA	NA	NA	44385202	44383937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163
transcript_59561.known	chr17	-	496	3	FSM	ENSG00000005961.19	ENST00000587295.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	23.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	9171	False	NA	-36	True	AATAAA	-16	NA	44376184	44372180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44372424_44375832_44375986_44376084
transcript_59562.nic	chr17	-	496	2	ISM	ENSG00000005961.19	ENST00000648408.1	2618	25	10430	0	1274	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	1266	False	NA	-35	True	AATAAA	-17	NA	44374910	44372179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_44372424_44374658
transcript_59564.known	chr17	-	4713	9	FSM	ENSG00000186566.13	ENST00000587228.5	4713	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	50.3039200758748	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTTTGCTTTCAGT	-10	True	NA	NA	False	NA	NA	NA	44503404	44397415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44467096_44467115_44474828_44474904_44503325
transcript_59567.known	chr17	-	6832	8	FSM	ENSG00000186566.13	ENST00000591680.6	6832	8	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	15.7997675002268	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCAGAGTCTGTCGTAA	-12	True	NA	-4	True	AATAAA	-18	NA	44503406	44395280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_59572.nic	chr17	-	810	7	ISM	ENSG00000186566.13	ENST00000591680.6	6832	8	-199	10688	-175	-4561	5prime_fragment	FALSE	canonical	3	101	junction_1	17.0236763231552	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGGCGGCTCCATGAGT	-3	True	NA	NA	False	AAAAAG	-2	NA	44503605	44405968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_59579.known	chr17	-	650	3	FSM	ENSG00000186566.13	ENST00000592154.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGGCGCCTGTAGTC	172	False	NA	NA	False	NA	NA	NA	44503430	44473289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44473760_44474828_44474904_44503325
transcript_59581.known	chr17	-	565	2	FSM	ENSG00000186566.13	ENST00000588554.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTTATATTAAAAACAT	-12	True	NA	NA	False	NA	NA	NA	44503406	44474419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44474904_44503325
transcript_59582.known	chr17	+	4610	8	FSM	ENSG00000180336.18	ENST00000409122.7	4610	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.67486401886892	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTCATTTTTCTAAA	12	True	NA	8	True	AATAAA	-18	NA	44656467	44675801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44656683_44657126_44657262_44662316_44662472_44665383_44665489_44666375_44668234_44669382_44669518_44673365_44673547_44673975
transcript_59583.known	chr17	-	2114	5	FSM	ENSG00000180329.14	ENST00000315286.13	2114	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	122.7202102345	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-4	True	NA	-9	True	AATAAA	-40	NA	44689776	44677439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44679044_44680584_44680644_44682002_44682139_44683871_44683960_44689549
transcript_59584.known	chr17	-	2058	4	FSM	ENSG00000180329.14	ENST00000457422.6	2058	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	138.843637072628	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-7	True	NA	-9	True	AATAAA	-40	NA	44689779	44677439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44679044_44682002_44682139_44683871_44683960_44689549
transcript_59585.known	chr17	-	692	3	FSM	ENSG00000180329.14	ENST00000592333.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	2.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATACAATATAGCTGTA	126	False	NA	NA	False	AAAACA	-38	NA	44689745	44681730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44682139_44683871_44683960_44689549
transcript_59588.nic	chr17	+	3488	13	ISM	ENSG00000161692.18	ENST00000393547.6	1810	15	-9	1722	-9	303	5prime_fragment	FALSE	canonical	3	13	junction_5	14.613540144522	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAGAGATGGGGCTGGAA	NA	False	NA	10	True	AATAAA	-18	NA	44708598	44750542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_59591.known	chr17	+	2998	12	FSM	ENSG00000161692.18	ENST00000526924.5	2998	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	12.5993571920512	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCACTTTTTCTT	7	True	NA	NA	False	NA	NA	NA	44708697	44750239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_596.known	chr1	-	1397	10	FSM	ENSG00000279457.4	ENST00000623083.4	1397	10	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_4	86.0651490241155	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTCCATGACACCTTCC	4461	False	NA	NA	False	NA	NA	NA	195411	185216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262
transcript_59605.known	chr17	+	836	5	FSM	ENSG00000161692.18	ENST00000528766.5	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	5.3851648071345	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCACCTCCAACTCTG	10	True	NA	NA	False	NA	NA	NA	44708655	44731218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_59608.known	chr17	+	933	5	FSM	ENSG00000161692.18	ENST00000532789.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	21.821720830402	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGCGAAACCCCATCT	171	False	NA	NA	False	NA	NA	NA	44708861	44731422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708939_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_59610.nnic	chr17	+	580	4	NNC	ENSG00000161692.18	novel	836	5	NA	NA	1	-7361	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	24.9977776790036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAAATCTTTTTCCTTATT	11	True	NA	NA	False	AATAAA	-19	NA	44708656	44723799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_44708840_44709303_44709367_44722879_44723145_44723730
transcript_59613.known	chr17	+	624	4	FSM	ENSG00000161692.18	ENST00000531699.5	624	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.9196334794266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTGGAGGCTCAGACAA	155	False	NA	NA	False	NA	NA	NA	44708845	44731160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708939_44722879_44723023_44729904_44730097_44730964
transcript_59614.known	chr17	+	562	5	FSM	ENSG00000161692.18	ENST00000526915.5	562	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	22.5208236971919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCAGAGGTAGGTCATC	37	False	NA	NA	False	AAAACA	-10	NA	44708727	44734153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708840_44722879_44723023_44729904_44730097_44730964_44731016_44734089
transcript_59615.known	chr17	+	1810	15	FSM	ENSG00000161692.18	ENST00000393547.6	1810	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	20.1996413385011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCTTTTATGTCTTTC	NA	False	NA	2	True	AATAAA	-16	NA	44708607	44752264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340_44748466_44750594_44750678_44751939
transcript_59621.nic	chr17	-	2645	4	NIC	ENSG00000182963.11	novel	586	3	NA	NA	-47	12	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	85.0267931628352	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGGAAATTTTTTTTTG	197	False	NA	NA	False	AAAAAG	-4	NA	44830863	44803021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_44804115_44804587_44805838_44807393_44807470_44830637
transcript_59624.known	chr17	-	478	3	FSM	ENSG00000182963.11	ENST00000586267.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	93.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCATGTACGCTTCTG	1366	False	NA	NA	False	NA	NA	NA	44829694	44805607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44805838_44807393_44807470_44829522
transcript_59625.known	chr17	-	586	3	FSM	ENSG00000182963.11	ENST00000591424.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	79.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGAAGCAGACAAGAAGG	-5	True	NA	NA	False	NA	NA	NA	44830816	44805506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44805838_44807393_44807470_44830637
transcript_59627.known	chr17	-	4326	28	FSM	ENSG00000108883.13	ENST00000426333.7	4326	28	0	0	0	0	multi-exon	TRUE	canonical	3	817	junction_16	99.9256513737545	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCTGTTGCATGAT	-21	True	NA	NA	False	NA	NA	NA	44899445	44849947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_59630.known	chr17	-	3045	27	FSM	ENSG00000108883.13	ENST00000402521.7	3045	27	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_26	211.356257195337	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAGTGAGAGAGGAGCAT	-21	True	NA	NA	False	NA	NA	NA	44899445	44851119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44899368
transcript_59643.known	chr17	+	3397	4	FSM	ENSG00000214447.5	ENST00000331733.4	3397	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6.84754619472471	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTGCTTTGCTTTCT	7	True	NA	10	True	NA	NA	NA	44899773	44905390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44899860_44900989_44901142_44901519_44901653_44902364
transcript_59648.known	chr17	+	849	4	FSM	ENSG00000167131.17	ENST00000357776.6	849	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.0979218029257	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCAGGTTGACTGATGC	-5	True	NA	NA	False	NA	NA	NA	44899715	44902800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44899844_44900989_44901142_44901519_44901653_44902364
transcript_59653.known	chr17	-	594	4	FSM	ENSG00000131095.14	ENST00000585543.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCTTGCTGCCCTAGG	5401	False	NA	NA	False	NA	NA	NA	44911515	44907204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44907389_44908063_44908150_44910614_44910659_44911235
transcript_59659.nic	chr17	-	925	3	ISM	ENSG00000131095.14	ENST00000591880.2	1103	4	-235	2355	-12	0	5prime_fragment	FALSE	canonical	0	0	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTGAATGTGACGTGT	5389	False	NA	NA	False	AATAAA	-30	NA	44911527	44909671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_44910261_44910614_44910659_44911235
transcript_59660.known	chr17	-	3364	28	FSM	ENSG00000108883.13	ENST00000592576.5	3364	28	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_23	208.392673030602	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTACATTCTGAATATA	-7	True	NA	-62	True	NA	NA	NA	44899431	44850865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883129_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_59661.known	chr17	-	4088	16	FSM	ENSG00000186185.14	ENST00000593135.6	4088	16	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_7	53.4742305539157	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGTGTGTCTCTCTGTA	-57	True	NA	-4	True	AATAAA	-15	NA	44947773	44924710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44926187_44926413_44926500_44926988_44927079_44928025_44928579_44928818_44929025_44931601_44931730_44932055_44932207_44932672_44932774_44932911_44932987_44933922_44934100_44934232_44934431_44934506_44934618_44934830_44934936_44935258_44935417_44936031_44936359_44947627
transcript_59662.known	chr17	+	1028	1	FSM	ENSG00000267334.1	ENST00000591013.1	1028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGATGGCTTACAGCAT	18	False	NA	NA	False	AATAAA	-10	NA	44947911	44948939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44947900_44948900
transcript_59663.known	chr17	+	4918	13	FSM	ENSG00000136448.13	ENST00000678332.1	4918	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	238.804138713437	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAATAAAGAAAGCAGCTG	5	True	NA	NA	False	AATACA	-12	NA	45061319	45108989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061461_45078082_45078150_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_59664.known	chr17	+	4756	11	FSM	ENSG00000136448.13	ENST00000587670.2	4756	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	188.47071390537	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAATAAAGAAAGCAGCTG	-9	True	NA	NA	False	AATACA	-12	NA	45061305	45108989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061461_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_59667.known	chr17	+	1328	8	FSM	ENSG00000136448.13	ENST00000590310.2	1328	8	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_5	21.2929038672991	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTAGTGAACCTTCA	-14	True	NA	NA	False	AGTAAA	-19	NA	45061300	45099819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404
transcript_59668.known	chr17	+	3058	13	FSM	ENSG00000136448.13	ENST00000676828.1	3058	13	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_12	176.05815011587	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTGTTTCTAATAAAGA	346	False	NA	NA	False	AATACA	-3	NA	45061270	45108980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618_45105946_45107778
transcript_59669.known	chr17	+	1939	12	FSM	ENSG00000136448.13	ENST00000592654.3	1939	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	185.77227684177	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTAAATATCTTTCATG	364	False	NA	23	True	AATAAA	-30	NA	45061678	45105986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061911_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_59671.known	chr17	-	1000	5	FSM	ENSG00000172992.13	ENST00000651974.1	2171	5	13	1158	-1	-760	multi-exon	FALSE	canonical	0	0	junction_4	72.1504504490443	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGGCTCGCTGCCAT	2	True	NA	NA	False	NA	NA	NA	45051619	45024501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051360
transcript_59672.known	chr17	-	990	5	FSM	ENSG00000172992.13	ENST00000452796.7	2027	5	70	967	5	-569	multi-exon	FALSE	canonical	3	58	junction_4	48.0175749075273	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	11	True	NA	NA	False	NA	NA	NA	45051610	45024310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051552
transcript_59673.known	chr17	-	2122	5	FSM	ENSG00000172992.13	ENST00000310604.9	2112	5	-8	-2	4	0	multi-exon	FALSE	canonical	1	2	junction_4	71.306994748061	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGATTCCCAGACTTG	7	True	NA	-16	True	AATAAA	-28	NA	45061109	45023345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035003_45060887
transcript_59680.known	chr17	+	1276	12	FSM	ENSG00000181513.15	ENST00000619916.4	1276	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.7730594015283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCGTGAACTCAGCTCA	NA	False	NA	NA	False	NA	NA	NA	45132599	45142610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45132664_45135340_45135597_45135841_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137922_45137989_45139020_45139161_45142582
transcript_59682.known	chr17	+	1579	10	FSM	ENSG00000181513.15	ENST00000586346.5	1579	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	11.159892915102	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGATCGGGTCTCAGCCCC	-32	True	NA	NA	False	NA	NA	NA	45135646	45143850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
transcript_59684.known	chr17	+	1453	10	FSM	ENSG00000181513.15	ENST00000376955.8	1453	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.1240266435113	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGACCTTGCTTTCCT	15	True	NA	6	True	NA	NA	NA	45135693	45142959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137922_45137989_45139020_45139161_45142582
transcript_59685.known	chr17	+	1827	10	FSM	ENSG00000181513.15	ENST00000321854.13	1827	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	10.2415276638248	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	8	True	NA	12	True	AATAAA	-13	NA	45135686	45144176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_59688.known	chr17	+	1684	9	FSM	ENSG00000181513.15	ENST00000592162.5	1684	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	17.5708387676855	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	11	True	NA	12	True	AATAAA	-13	NA	45135689	45144176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45143442
transcript_59693.known	chr17	+	1986	9	FSM	ENSG00000181513.15	ENST00000398322.7	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	10.8512672071054	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTGGTCCCCTACGG	8	True	NA	17	True	AATAAA	-18	NA	45135686	45144181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_59694.known	chr17	-	1741	1	FSM	ENSG00000276728.1	ENST00000612013.1	1741	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCGTTCTTTTTATT	1801	False	NA	NA	False	NA	NA	NA	45148470	45146729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45146700_45148500
transcript_59697.known	chr17	+	1528	4	FSM	ENSG00000168517.11	ENST00000307275.7	1528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.3306450738701	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTAGGATTGATTTCAC	-8	True	NA	29	True	ATTAAA	-25	NA	45160699	45170040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45160944_45162487_45162636_45162749_45162860_45169014
transcript_597.known	chr1	+	372	1	FSM	ENSG00000225972.1	ENST00000416931.1	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	285	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATGTCTGATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	629061	629433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_629100_629400
transcript_59701.known	chr17	+	1436	4	FSM	ENSG00000168517.11	ENST00000589230.6	1436	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	33.4697209761633	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-23	True	NA	24	True	ATTAAA	-20	NA	45161874	45170035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45162032_45162487_45162636_45162749_45162860_45169014
transcript_59702.known	chr17	+	1345	3	FSM	ENSG00000168517.11	ENST00000585340.2	1345	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	22	False	NA	24	True	ATTAAA	-20	NA	45160729	45170035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45160944_45162749_45162860_45169014
transcript_59703.known	chr17	+	1302	3	FSM	ENSG00000168517.11	ENST00000593138.6	1302	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	0	True	NA	24	True	ATTAAA	-20	NA	45161077	45170035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45161249_45162749_45162860_45169014
transcript_59704.known	chr17	+	1176	3	FSM	ENSG00000168517.11	ENST00000591576.5	1176	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	41	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-3	True	NA	24	True	ATTAAA	-20	NA	45161894	45170035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45161940_45162749_45162860_45169014
transcript_59705.known	chr17	+	1246	3	FSM	ENSG00000168517.11	ENST00000592695.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	26.5	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	19	True	NA	24	True	ATTAAA	-20	NA	45161916	45170035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45162032_45162749_45162860_45169014
transcript_59708.known	chr17	-	570	2	FSM	ENSG00000224505.3	ENST00000589950.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGGGGATTTCTCTTC	-8	True	NA	NA	False	NA	NA	NA	45161510	45150399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45150920_45161460
transcript_59710.known	chr17	+	3625	1	FSM	ENSG00000186834.4	ENST00000332499.4	3625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCTTCGTGTTTTTT	-1	True	NA	13	True	ATTAAA	-15	NA	45148474	45152099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45148500_45152100
transcript_59711.known	chr17	+	1438	3	FSM	ENSG00000168517.11	ENST00000586681.6	1438	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	47.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	16	False	NA	24	True	ATTAAA	-20	NA	45161093	45170035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45161401_45162749_45162860_45169014
transcript_59712.known	chr17	+	1323	4	FSM	ENSG00000168517.11	ENST00000591070.6	1323	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.9959347578106	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	-2	True	NA	24	True	ATTAAA	-20	NA	45161895	45170035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45161940_45162487_45162636_45162749_45162860_45169014
transcript_59713.known	chr17	+	2487	14	FSM	ENSG00000184922.15	ENST00000587489.5	2487	14	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	6.31050593907498	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCGTCGGCTCCATGC	-10	True	NA	15	True	AATAAA	-14	NA	45241074	45247318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45241231_45241381_45241635_45241846_45242147_45242340_45242466_45243117_45243321_45243790_45244026_45244175_45244245_45244818_45244900_45244978_45245109_45245252_45245417_45245631_45245734_45245877_45245974_45246209_45246331_45246866
transcript_59718.known	chr17	+	2175	4	FSM	ENSG00000267278.6	ENST00000655903.1	2175	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	6.18241233033047	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	4	True	NA	-12	True	NA	NA	NA	45247934	45269814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45248004_45255134_45255219_45267112_45267329_45268008
transcript_59724.nnic	chr17	+	476	3	NNC	ENSG00000267278.6	novel	488	3	NA	NA	-13	-7623	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	23	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGCGTTACTGGGA	5436	False	NA	NA	False	TATAAA	-22	NA	45247902	45259843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_45248004_45255134_45255219_45259552
transcript_59725.known	chr17	+	2090	3	FSM	ENSG00000267278.6	ENST00000590100.6	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	23	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	5	True	NA	-12	True	NA	NA	NA	45247935	45269814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45248004_45267112_45267329_45268008
transcript_59726.known	chr17	+	2296	3	FSM	ENSG00000267278.6	ENST00000586450.6	2296	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAATGTAAGGAAGTGT	7046	False	NA	-2	True	AATAAA	-2	NA	45262079	45269824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45262344_45267112_45267329_45268008
transcript_59729.nic	chr17	-	651	3	ISM	ENSG00000233483.3	ENST00000420431.2	579	4	-75	2088	-75	-7	5prime_fragment	FALSE	canonical	1	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTCCTCGGGGCTGGGG	NA	False	NA	-7	True	TATAAA	-14	NA	45248414	45247273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_45247517_45247874_45248049_45248180
transcript_59730.nnic	chr17	-	628	3	NNC	ENSG00000233483.3	novel	579	4	NA	NA	-11	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTCCTCGGGGCTGGGG	-7	True	NA	-7	True	TATAAA	-14	NA	45248350	45247273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_45247517_45247874_45248090_45248180
transcript_59731.nic	chr17	-	563	3	ISM	ENSG00000233483.3	ENST00000420431.2	579	4	-75	2176	-75	19	5prime_fragment	FALSE	canonical	1	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCGGGTGGCTGCGG	NA	False	NA	3	True	AGTAAA	-19	NA	45248414	45247361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_45247517_45247874_45248049_45248180
transcript_59733.known	chr17	-	2238	2	FSM	ENSG00000267121.6	ENST00000591365.1	2238	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGGCCTGGTGGAATAA	32	True	NA	-49	True	GGGGCT	-28	NA	45222222	45219349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45219633_45220267
transcript_59734.known	chr17	-	377	2	FSM	ENSG00000233175.2	ENST00000393507.2	377	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAAAGTGTACAATTC	7146	False	NA	-13	True	CATAAA	-4	NA	45241197	45240314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45240605_45241110
transcript_59735.known	chr17	-	393	2	FSM	ENSG00000233483.3	ENST00000589518.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	500	False	NA	0	True	TATAAA	-21	NA	45247843	45247266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45247517_45247700
transcript_59736.nnic	chr17	-	422	2	NNC	ENSG00000233483.3	novel	393	2	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGGTCCTCGGGGCTGGGG	501	False	NA	-7	True	TATAAA	-14	NA	45247842	45247273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_45247517_45247663
transcript_59738.known	chr17	-	386	2	FSM	ENSG00000267446.1	ENST00000589730.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATTTGTACACCCATG	NA	False	NA	NA	False	AATAAA	-28	NA	45372057	45371401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45371592_45371861
transcript_59741.known	chr17	+	348	1	FSM	ENSG00000204652.6	ENST00000393490.3	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	29	False	NA	NA	False	NA	NA	NA	45608570	45608918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45608600_45608900
transcript_59743.known	chr17	+	2695	15	FSM	ENSG00000263715.7	ENST00000634540.1	2695	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.1834631024505	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAAGGCCTGGACT	4	True	NA	7	True	TATAAA	-23	NA	45620343	45835826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45807009_45807098_45816462_45816583_45821354_45821441_45829214_45829322_45830093_45830215_45830416_45830571_45830879_45830941_45833137_45833211_45833451_45833538_45833713_45833850_45834006_45834049_45834623
transcript_59785.known	chr17	+	546	4	FSM	ENSG00000204650.14	ENST00000585118.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	56.3461523876199	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGAAGGCCTGAACTGG	-12	True	NA	NA	False	NA	NA	NA	45620327	45636394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45636282
transcript_59787.known	chr17	+	9678	4	FSM	ENSG00000204650.14	ENST00000591271.5	9678	4	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_3	96.8813707582629	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTTGCCAGAGAATTT	0	True	NA	NA	False	AATAAA	-19	NA	45620339	45655156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45645900
transcript_5979.known	chr1	+	3507	9	FSM	ENSG00000162607.13	ENST00000371146.5	3507	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	95.0259832887827	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTGTGTATATATA	NA	False	NA	84	True	TATAAA	-24	NA	62436303	62451802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62436563_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_59790.known	chr17	+	2609	4	FSM	ENSG00000204650.14	ENST00000455565.5	2609	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	105.837401496614	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTAGCCTAGAGCTCGT	270	False	NA	13	True	AATAAA	-23	NA	45620609	45637959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45621153_45621907_45622042_45629903_45630159_45636282
transcript_59792.known	chr17	+	718	3	FSM	ENSG00000204650.14	ENST00000582491.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	64.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTTTGTTT	2	True	NA	NA	False	NA	NA	NA	45620341	45630456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45620373_45621907_45622042_45629903
transcript_59796.known	chr17	+	1107	9	FSM	ENSG00000186868.17	ENST00000334239.12	1107	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.49687304442977	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGTCAATAATTGTGGAG	15	False	NA	NA	False	NA	NA	NA	45894667	46024183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45894687_45962320_45962471_45978374_45978441_45987039_45987096_45991459_45991587_45996398_45996665_46014242_46014325_46018617_46018731_46023955
transcript_59797.nic	chr17	+	770	2	ISM	ENSG00000186868.17	ENST00000571311.5	544	5	-37	15493	2	-15493	5prime_fragment	FALSE	canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAAAAAGAAAGAAA	2	True	NA	NA	False	NA	NA	NA	45894528	45962932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_45894687_45962320
transcript_59798.known	chr17	-	3392	8	FSM	ENSG00000120071.15	ENST00000639375.1	3392	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	19.9028251507064	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCGTGGTGGCATATGT	8	True	NA	NA	False	AATACA	-9	NA	46225355	46049398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
transcript_598.known	chr1	+	681	1	FSM	ENSG00000248527.1	ENST00000514057.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	687	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	149	False	NA	46	True	NA	NA	NA	633695	634376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_633700_634400
transcript_59801.known	chr17	-	3365	4	FSM	ENSG00000120071.15	ENST00000638269.1	3365	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	21.7460085737335	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCATAACAGAAATTGTAAA	2	True	NA	NA	False	AAGAAA	-19	NA	46225361	46092869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46094702_46170854_46172233_46223670_46223805_46225340
transcript_59803.known	chr17	-	5147	16	FSM	ENSG00000120071.15	ENST00000574590.6	5147	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	26.6094385927667	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGTACCAGGCCTTTC	NA	False	NA	-14	True	AATAAA	-17	NA	46225389	46029915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034283_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46223670_46223805_46225340
transcript_59807.known	chr17	-	5309	15	FSM	ENSG00000120071.15	ENST00000262419.10	5309	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	25.2203554005611	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAAATTGAAAAAAA	4	True	NA	-54	True	NA	NA	NA	46192800	46029955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192418
transcript_59808.known	chr17	-	2655	2	FSM	ENSG00000120071.15	ENST00000639520.1	2655	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAACGAGAGAATTAA	-13	False	NA	NA	False	AGTAAA	-14	NA	46225376	46221185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46223805_46225340
transcript_59810.known	chr17	+	517	2	FSM	ENSG00000214401.5	ENST00000398275.5	527	2	8	2	8	-2	multi-exon	FALSE	canonical	3	41	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGAGTTCTAATGTT	-8	True	NA	1	True	AATAAA	-15	NA	46193575	46196721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46193739_46196367
transcript_59812.known	chr17	-	731	5	FSM	ENSG00000228696.10	ENST00000575960.5	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.974115859463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTGTCAAAAAAGAAGAG	27	False	NA	NA	False	NA	NA	NA	46361718	46330452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46330599_46339508_46339775_46352819_46352931_46358249_46358415_46361675
transcript_59817.nnic	chr17	-	659	4	NNC	ENSG00000228696.10	novel	1140	5	NA	NA	0	-6652	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.9874990232849	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGTCAAATAGAAATTCTA	NA	False	NA	NA	False	AATAAA	-20	NA	46361797	46317836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_46318098_46352819_46352931_46358249_46358415_46361675
transcript_59818.known	chr17	-	491	4	FSM	ENSG00000228696.10	ENST00000571246.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	79.0456970506442	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAAACCTGAGTCC	13	False	NA	NA	False	AATAAA	-18	NA	46361732	46334679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46334838_46352819_46352931_46358249_46358415_46361675
transcript_59819.known	chr17	-	5240	4	FSM	ENSG00000228696.10	ENST00000450673.4	5240	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	24.0878023535196	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46361766	46334901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46339775_46352819_46352931_46358249_46358415_46361675
transcript_59821.nnic	chr17	-	673	4	NNC	ENSG00000228696.10	novel	1140	5	NA	NA	0	-11171	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	79.5165950534157	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTGGACCTCCTCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	46361797	46346072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_46346348_46352819_46352931_46358249_46358415_46361675
transcript_59822.nnic	chr17	-	876	4	NNC	ENSG00000228696.10	novel	1140	5	NA	NA	0	-16828	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	78.1039193781095	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAGTCGACTGTCCCTT	NA	False	NA	NA	False	AGTAAA	-35	NA	46361797	46351729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_46352208_46352819_46352931_46358249_46358415_46361675
transcript_59825.nic	chr17	+	1034	9	ISM	ENSG00000260075.1	ENST00000570034.1	1471	13	-43	30189	-43	-30189	5prime_fragment	FALSE	canonical	3	260	junction_7	21.3717102731625	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGATGAATGAGACCCAGA	NA	False	NA	NA	False	AGTAAA	-17	NA	46372811	46456952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_46372867_46406663_46406750_46409033_46409134_46412830_46412871_46419797_46419965_46422476_46422585_46423065_46423142_46425526_46425683_46456706
transcript_59826.known	chr17	-	798	5	FSM	ENSG00000185829.18	ENST00000445552.6	798	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.0669376152123	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATCTCTCTTGCTTGGA	11	False	NA	NA	False	AATAAA	-22	NA	46579670	46516701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46517014_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_59827.known	chr17	+	3082	6	FSM	ENSG00000238083.8	ENST00000572638.1	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	7.93977329651168	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAATGAAAATTGTGAT	6342	False	NA	NA	False	AATAAA	-15	NA	46547224	46555643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46549844_46550414_46550520_46553399_46553450_46555151_46555207_46555284_46555425_46555530
transcript_59828.known	chr17	-	491	4	FSM	ENSG00000185829.18	ENST00000570550.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	79.0456970506442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAAACCTGAGTCC	24	False	NA	NA	False	AATAAA	-18	NA	46579657	46552532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46552691_46570758_46570870_46576174_46576340_46579600
transcript_59829.known	chr17	-	5242	4	FSM	ENSG00000185829.18	ENST00000336125.6	5242	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	23.6220236220354	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46579691	46552755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46557631_46570758_46570870_46576174_46576340_46579600
transcript_5983.known	chr1	+	3602	9	FSM	ENSG00000162607.13	ENST00000339950.5	3602	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	24.9899979991996	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGTGTATATATATA	-27	True	NA	86	True	TATAAA	-26	NA	62437048	62451804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_59830.known	chr17	+	3983	21	FSM	ENSG00000073969.18	ENST00000398238.8	3983	21	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_18	34.284690460904	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTAGACCAGTGTTT	NA	False	NA	17	True	AATAAA	-20	NA	46590668	46757464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852_46713987_46726548_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
transcript_59833.nic	chr17	+	2150	15	ISM	ENSG00000073969.18	ENST00000398238.8	3983	21	38	43158	38	-37277	5prime_fragment	FALSE	canonical	3	202	junction_13	31.9965718827017	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTTAAAGTTCTTTC	NA	False	NA	34	True	AATAAA	-18	NA	46590706	46714306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852
transcript_59834.nic	chr17	+	1060	9	ISM	ENSG00000073969.18	ENST00000398238.8	3983	21	38	82805	38	33963	5prime_fragment	FALSE	canonical	3	260	junction_7	21.6069288655283	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGATGAATGAGACCCAGA	NA	False	NA	NA	False	AGTAAA	-17	NA	46590706	46674659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413
transcript_59837.known	chr17	-	586	1	FSM	ENSG00000213326.4	ENST00000484240.1	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	941	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAATGGCTAAATAAAA	57	False	NA	NA	False	NA	NA	NA	46722167	46721581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46721600_46722200
transcript_59838.known	chr17	-	3287	5	FSM	ENSG00000108379.10	ENST00000225512.6	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.78564169540279	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACATTGTACACTGTG	-3	True	NA	-12	True	ATTAAA	-23	NA	46818692	46762505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46764622_46768311_46768800_46769782_46770049_46773667_46773910_46818517
transcript_59840.known	chr17	-	734	3	FSM	ENSG00000108379.10	ENST00000572508.1	734	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATGCCATGTACT	3	True	NA	NA	False	AATAAA	-16	NA	46833058	46830594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46830919_46831447_46831563_46832763
transcript_59841.known	chr17	-	395	3	FSM	ENSG00000261886.1	ENST00000572349.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAAACATTACCCAGTG	126	False	NA	NA	False	AATAAA	-8	NA	46923034	46916769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46916832_46917164_46917274_46922810
transcript_59842.nic	chr17	+	969	6	ISM	ENSG00000262633.2	ENST00000639822.1	1564	8	-32	82937	-5	-80159	5prime_fragment	FALSE	canonical	3	15	junction_5	134.406845063784	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTGTGAAGTCCCTT	-18	True	NA	21	True	ATTAAA	-14	NA	46923127	46966995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46938598_46938705_46966533
transcript_59850.known	chr17	+	1245	7	FSM	ENSG00000108433.17	ENST00000225567.9	1245	7	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_6	103.162897077066	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACATGGACATTTACTT	7027	False	NA	NA	False	TTTAAA	-36	NA	46923119	46941143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46940554
transcript_59852.known	chr17	+	1115	7	FSM	ENSG00000108433.17	ENST00000573224.2	1115	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	101.481799134404	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	-18	True	NA	26	True	ATTAAA	-19	NA	46923127	46967000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533
transcript_59856.known	chr17	+	2683	6	FSM	ENSG00000108433.17	ENST00000638374.1	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	110.362312407814	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCAGAGGTGGTTTT	18	True	NA	NA	False	NA	NA	NA	46923163	46940779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_59861.known	chr17	+	3574	6	FSM	ENSG00000108433.17	ENST00000638216.1	3574	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	108.558924091942	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGTCACCCAGGC	0	True	NA	NA	False	TTTAAA	-42	NA	46923145	46941600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_59862.known	chr17	+	885	5	FSM	ENSG00000108433.17	ENST00000639031.1	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	122.569113156619	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTTGTATTTTAGT	52	False	NA	NA	False	NA	NA	NA	46923197	46935586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028
transcript_59865.known	chr17	+	3808	5	FSM	ENSG00000108433.17	ENST00000638892.1	3808	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	143.398919103318	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAGTCCAAAAAAGATT	-8	True	NA	8	True	AATAAA	-20	NA	46923137	46942019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46938598
transcript_59870.known	chr17	+	2190	5	FSM	ENSG00000108433.17	ENST00000640269.1	2190	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	120.471988445447	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGATCTCTGATGGCA	14	True	NA	-6	True	AATACA	-8	NA	46923159	46936801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028
transcript_59873.known	chr17	+	2367	5	FSM	ENSG00000108433.17	ENST00000639287.1	2367	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.0887185161	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGTGGCTGAAAATGAA	20	True	NA	NA	False	GGGGCT	-29	NA	46923165	46936621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923633_46929519_46929585_46931098_46931208_46932066_46932200_46935028
transcript_59874.known	chr17	+	1425	4	FSM	ENSG00000108433.17	ENST00000640007.1	1425	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	135.450688034018	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTCTTCCTGGTCAT	15	True	NA	14	True	AATAAA	-16	NA	46923160	46933262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931104_46931208_46932066
transcript_59877.known	chr17	+	3395	4	FSM	ENSG00000108433.17	ENST00000640495.1	3395	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	115.854314646552	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGGCTAATTTTTTTT	17	True	NA	NA	False	NA	NA	NA	46923162	46941728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46935028_46935170_46938598
transcript_5988.nic	chr1	+	1493	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-412	6964	333	1520	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGTAAAAAATGTGGC	252	False	NA	NA	False	AAGAAA	-21	NA	62436636	62444840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_59881.known	chr17	+	2679	3	FSM	ENSG00000108433.17	ENST00000640709.1	2679	3	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	16.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTTTTTTTTTTTGGA	-8	True	NA	NA	False	AAGAAA	-11	NA	46923137	46933628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098
transcript_59883.known	chr17	+	788	5	FSM	ENSG00000108433.17	ENST00000393456.7	788	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	142.053467046743	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTCTCACTCTCGCTC	42	False	NA	28	True	AATGAA	-15	NA	46923187	46938997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46938598
transcript_59884.known	chr17	+	1273	9	FSM	ENSG00000108433.17	ENST00000638579.1	1273	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	131.180219545479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTACTTAAGCTGGTTTGC	12	True	NA	NA	False	AATAAA	-7	NA	46923157	46952820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46948565_46948658_46948942_46949348_46952662
transcript_59885.known	chr17	-	1411	6	FSM	ENSG00000262879.6	ENST00000655133.1	1411	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.60768096208106	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGAGTTGGGTTTCTGTC	8	False	NA	NA	False	AATAAA	-20	NA	47067523	47010069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47010737_47021581_47021722_47033277_47033382_47054117_47054214_47056459_47056754_47067413
transcript_5989.nic	chr1	+	1631	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-412	6826	333	1658	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATGGGAAAAGAAAAAG	252	False	NA	13	True	TTTAAA	-16	NA	62436636	62444978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_59890.known	chr17	-	633	2	FSM	ENSG00000262879.6	ENST00000670987.1	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTGGATGTGTG	-5	True	NA	-10	True	NA	NA	NA	47067499	47056206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47056754_47067413
transcript_59891.nnic	chr17	-	608	2	NIC	ENSG00000262879.6	novel	622	2	NA	NA	46	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTGGATGTGTG	377	False	NA	-10	True	NA	NA	NA	47099895	47056206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_47056754_47099834
transcript_59892.known	chr17	-	836	2	FSM	ENSG00000262879.6	ENST00000574741.1	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAAATACTTCCTGCTC	33	False	NA	NA	False	NA	NA	NA	47100239	47081919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47082351_47099834
transcript_59894.known	chr17	-	372	3	FSM	ENSG00000262879.6	ENST00000576938.1	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	7.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAATAAAATTCTAAG	331	False	NA	NA	False	NA	NA	NA	47099941	47071473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47071651_47072471_47072560_47099834
transcript_59896.known	chr17	-	2579	19	FSM	ENSG00000004897.12	ENST00000527547.5	2579	19	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	23.1882393562867	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTCTGTATACTGAGT	109	False	NA	NA	False	NA	NA	NA	47189224	47120879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142023_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_59897.known	chr17	-	3177	19	FSM	ENSG00000004897.12	ENST00000531206.5	3177	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_11	39.0654721091543	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGATCATTGTTGTCTT	157	False	NA	-5	True	NA	NA	NA	47189176	47120254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151937_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_599.known	chr1	-	6432	16	FSM	ENSG00000228327.4	ENST00000506640.2	6432	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	36.6232470191028	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGGAGTGAGTTTCT	13	True	NA	NA	False	NA	NA	NA	778626	725884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_729805_733306_733365_735422_735614_743179_743351_744194_744392_744727_744826_746694_746819_756076_756142_758966_759124_764722_765248_766328_766388_768547_768614_769496_769713_772975_773108_774170_774281_778283
transcript_5990.nic	chr1	+	1748	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-412	6709	333	1775	5prime_fragment	FALSE	canonical	3	276	junction_2	24.1114080882888	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAAGTGATACATTAGA	252	False	NA	NA	False	AAAAAG	-5	NA	62436636	62445095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_59909.nic	chr17	-	1399	11	ISM	ENSG00000004897.12	ENST00000527547.5	2579	19	-115	21495	-44	53	5prime_fragment	FALSE	canonical	3	100	junction_3	21.822236365689	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTAATAAAGGAGGAA	-6	True	NA	NA	False	ATTAAA	-43	NA	47189339	47142374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_59913.nic	chr17	-	1337	10	ISM	ENSG00000004897.12	ENST00000527547.5	2579	19	-115	23003	-44	0	5prime_fragment	FALSE	canonical	3	100	junction_2	22.0442876338509	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTAAAGATTTCTGTA	-6	True	NA	NA	False	NA	NA	NA	47189339	47143882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_59920.known	chr17	-	2570	18	FSM	ENSG00000004897.12	ENST00000533415.5	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_16	42.0786872056985	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTGCAATATTTAGCTG	30	True	NA	NA	False	AATGAA	-2	NA	47189251	47120770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47121018_47122443_47122601_47123885_47123961_47129392_47129522_47132256_47132375_47137151_47137361_47138738_47138892_47141852_47142026_47142228_47142437_47143882_47143983_47151805_47151919_47154671_47154787_47156912_47157125_47157229_47157385_47158205_47158304_47169916_47170043_47181561_47181638_47189145
transcript_59921.known	chr17	-	781	7	FSM	ENSG00000004897.12	ENST00000575483.5	781	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	56.6639705240954	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTCAAACAAGATACTT	29	True	NA	NA	False	NA	NA	NA	47189252	47156912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47156984_47157229_47157385_47158205_47158304_47169916_47170043_47171916_47172065_47181561_47181638_47189145
transcript_59922.known	chr17	+	850	8	FSM	ENSG00000198336.9	ENST00000572316.5	850	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	9.34595841931207	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCTCTGGGATTCTG	-21	True	NA	18	True	AATAAA	-18	NA	47209034	47223658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47209092_47209388_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_59923.known	chr17	+	907	8	FSM	ENSG00000198336.9	ENST00000354968.5	907	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.71779788708135	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTCTCTGTTTTGTTTG	6	True	NA	38	True	AATAAA	-38	NA	47209061	47223678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47209156_47209388_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_59926.known	chr17	+	855	7	FSM	ENSG00000198336.9	ENST00000393450.5	855	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	4.29793231940921	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTCTCTGTTTTGTTTGT	-1	True	NA	39	True	AATAAA	-39	NA	47209347	47223679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_59935.nic	chr17	+	1205	10	ISM	ENSG00000178852.16	ENST00000517484.5	3466	22	-81	56071	-11	0	5prime_fragment	FALSE	canonical	0	0	junction_8	3.0711722135745	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGAGAATGATGACCTT	-27	True	NA	NA	False	AATAAA	-26	NA	47323943	47374639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_47324075_47324453_47324524_47326225_47326388_47328268_47328384_47335195_47335357_47341920_47342033_47344161_47344293_47345015_47345099_47370436_47370509_47374471
transcript_59938.nic	chr17	+	1359	9	NIC	ENSG00000178852.16	novel	3957	25	NA	NA	-11	-12867	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	1.89983551919633	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACATCTCTTTTCCAA	-27	True	NA	NA	False	AATAAA	-20	NA	47323943	47361771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_47324075_47324453_47324524_47326225_47326388_47328268_47328384_47335195_47335357_47341920_47342033_47344161_47344293_47345015_47345099_47361377
transcript_59948.known	chr17	-	927	6	FSM	ENSG00000228782.8	ENST00000425159.7	927	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.5188161098741	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACACAAAACAAAAAAGAAAG	-1	False	NA	NA	False	NA	NA	NA	47492492	47450567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47450879_47456683_47456794_47482991_47483091_47490165_47490296_47491014_47491193_47492393
transcript_59951.nnic	chr17	-	1184	6	NNC	ENSG00000228782.8	novel	1765	7	NA	NA	-12	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.5188161098741	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAGTTTCTTTGAGTA	NA	False	NA	NA	False	ATTAAA	-6	NA	47492504	47455101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_47455553_47456578_47456794_47482991_47483091_47490165_47490296_47491014_47491193_47492393
transcript_59956.nic	chr17	-	931	5	ISM	ENSG00000228782.8	ENST00000425159.7	927	6	-12	5813	-12	-1013	5prime_fragment	FALSE	canonical	2	7	junction_1	61.1488961470279	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAGGTCTCCATCAAATT	NA	False	NA	NA	False	NA	NA	NA	47492504	47456380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_47456794_47482991_47483091_47490165_47490296_47491014_47491193_47492393
transcript_59958.known	chr17	-	473	4	FSM	ENSG00000228782.8	ENST00000573318.1	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	50.6776303927307	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAACTCCCTACCTT	32	False	NA	NA	False	AAAAAG	-41	NA	47492459	47482991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47483091_47490165_47490296_47491014_47491193_47492393
transcript_59963.nnic	chr17	-	743	4	FSM	ENSG00000228782.8	ENST00000691039.1	736	4	-12	5	-12	-5	multi-exon	FALSE	canonical	3	22	junction_1	64.8913622055269	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTCCTGCTTAGAACT	NA	False	NA	-5	True	AATAAA	-16	NA	47492504	47488631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47488956_47490165_47490296_47491014_47491193_47492393
transcript_59965.nic	chr17	-	555	3	FSM	ENSG00000228782.8	ENST00000688561.1	528	3	-27	0	-12	0	multi-exon	FALSE	canonical	3	69	junction_2	54	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTCTGTATTTAATGC	NA	False	NA	NA	False	NA	NA	NA	47492504	47490029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47490296_47491014_47491193_47492393
transcript_5997.known	chr1	-	122	2	FSM	ENSG00000116641.18	ENST00000636635.1	122	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCACCTTCGGTGTGCA	74	True	NA	NA	False	AATGAA	-16	NA	62688282	62687590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_62687657_62688226
transcript_59970.known	chr17	-	442	4	FSM	ENSG00000263766.6	ENST00000584391.6	786	4	29	315	-4	-315	multi-exon	FALSE	canonical	3	14	junction_1	7.78888096369861	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCAGAATATTTTCACA	6	True	NA	NA	False	NA	NA	NA	47649420	47621841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47622088_47626546_47626628_47636511_47636602_47649395
transcript_59971.nnic	chr17	-	1185	3	NIC	ENSG00000263766.6	novel	786	4	NA	NA	-201	279	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	6	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTTAAATTGCTGCTAT	472	False	NA	NA	False	AATAAA	-30	NA	47649650	47621247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_47622088_47636511_47636602_47649395
transcript_59972.nnic	chr17	-	905	3	NIC	ENSG00000263766.6	novel	786	4	NA	NA	-201	-1	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	6	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTCTTTTAGGCTAA	472	False	NA	-19	True	AATAAA	-14	NA	47649650	47621527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_47622088_47636511_47636602_47649395
transcript_59973.nnic	chr17	-	705	3	NNC	ENSG00000263766.6	novel	437	4	NA	NA	-118	-2097	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGCCCCTGCTTCA	555	False	NA	NA	False	ATTAAA	-19	NA	47649567	47623623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_47624067_47636511_47636602_47649395
transcript_59974.nnic	chr17	-	455	3	NNC	ENSG00000263766.6	novel	437	4	NA	NA	-145	-7993	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGGTGGAATTTCTCCT	528	False	NA	NA	False	AATAAA	-16	NA	47649594	47633998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_47634165_47636511_47636602_47649395
transcript_59975.nic	chr17	-	1074	2	ISM	ENSG00000263766.6	ENST00000580045.1	733	3	-234	9777	-201	-9777	5prime_fragment	FALSE	canonical	3	31	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGCAGTGGCTCACGCC	472	False	NA	NA	False	AAAAAG	-2	NA	47649650	47635782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_47636602_47649395
transcript_59977.known	chr17	+	6182	23	FSM	ENSG00000108424.11	ENST00000583648.6	6182	23	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	311.652328009465	8409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	43	False	NA	24	True	AATAAA	-24	NA	47649494	47685505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47649878_47650177_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_59978.known	chr17	+	6058	22	FSM	ENSG00000108424.11	ENST00000290158.9	6058	22	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	176.679732542124	8522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	6	True	NA	24	True	AATAAA	-24	NA	47649918	47685505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_59985.known	chr17	-	1622	6	FSM	ENSG00000159111.13	ENST00000414011.1	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	346.027397759195	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTTATAATAAAATGAA	-6	True	NA	-51	True	NA	NA	NA	47831534	47823489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47829138_47829237_47831459
transcript_59986.known	chr17	-	1576	5	FSM	ENSG00000159111.13	ENST00000421763.5	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	308.842192713366	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACCCAGAAGTGGGTCC	-2	True	NA	NA	False	NA	NA	NA	47831530	47823582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831310
transcript_59988.known	chr17	-	1749	5	FSM	ENSG00000159111.13	ENST00000351111.7	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	77.5258021564434	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACGTGTCTCTGGTGGT	-13	True	NA	-3	True	ATTAAA	-25	NA	47831541	47823271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831459
transcript_59989.known	chr17	+	1885	8	FSM	ENSG00000141294.10	ENST00000269025.9	1885	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.51185789203691	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAAGCTGGCCGCTCAGA	18	True	NA	NA	False	AATAAA	-20	NA	47831669	47837719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47832000_47832099_47832206_47834424_47834534_47835352_47835400_47835665_47835776_47836032_47836103_47836332_47836476_47836749
transcript_5999.known	chr1	+	1228	2	FSM	ENSG00000235545.1	ENST00000453229.1	1228	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCCTAGTATTTTGC	-14	True	NA	NA	False	GATAAA	-19	NA	62688481	62710694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62688653_62709637
transcript_59994.nic	chr17	-	1520	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_7	99.8570406702931	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	1	True	NA	-15	True	AATAAA	-15	NA	47841274	47837691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841184
transcript_59995.known	chr17	-	1496	8	FSM	ENSG00000141295.14	ENST00000290216.14	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_7	54.79162754454	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	2	True	NA	-15	True	AATAAA	-15	NA	47841273	47837691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_59999.known	chr17	-	1477	8	FSM	ENSG00000141295.14	ENST00000581645.5	1477	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	116.186338724148	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCTTTATTTTCTCTT	9917	False	NA	-31	True	NA	NA	NA	47841247	47837707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838720_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_6.known	ERCC-00014	+	1957	1	FSM	ERCC-00014A	DQ875385	1957	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00014_+_0_2000
transcript_60.known	ERCC-00143	+	767	1	FSM	ERCC-00143A	DQ668362	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00143_+_0_800
transcript_60002.nic	chr17	-	1426	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	106.408531190897	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	-22	True	NA	-43	True	NA	NA	NA	47841297	47837719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_60009.known	chr17	-	1779	7	FSM	ENSG00000141295.14	ENST00000407215.7	1779	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	48.5168928198096	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-14	True	NA	-15	True	AATAAA	-15	NA	47841289	47837691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_60014.known	chr17	-	952	6	FSM	ENSG00000141295.14	ENST00000579856.5	952	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	134.840646690825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGACACCAGGCAGCCC	10	True	NA	NA	False	NA	NA	NA	47841265	47838312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840669_47840844_47841207
transcript_60033.known	chr17	-	1745	7	FSM	ENSG00000141295.14	ENST00000584123.5	1745	7	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	42.3034671549902	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTTATTTTCTCTTC	9991	False	NA	-30	True	NA	NA	NA	47841173	47837706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
transcript_60034.known	chr17	-	932	5	FSM	ENSG00000141295.14	ENST00000584567.1	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	129.25048355809	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	1680	False	NA	-43	True	NA	NA	NA	47839595	47837719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443
transcript_60035.known	chr17	-	912	3	FSM	ENSG00000141295.14	ENST00000578840.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	143.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTTGGCCCTCT	9941	False	NA	NA	False	NA	NA	NA	47841223	47839673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47840373_47840669_47840844_47841184
transcript_60037.nnic	chr17	+	543	3	Antisense	novelGene_ENSG00000189120.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGACTCTCAGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	47848038	47849677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_47848094_47848550_47848757_47849395
transcript_60039.nnic	chr17	+	426	3	Antisense	novelGene_ENSG00000189120.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGACTCTCAGTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	47848038	47849677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_47848094_47848550_47848757_47849512
transcript_60043.known	chr17	-	522	3	FSM	ENSG00000264920.3	ENST00000691236.1	557	3	25	10	4	0	multi-exon	FALSE	canonical	3	19	junction_2	2	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCATAACTGGTGC	446	False	NA	NA	False	ATTAAA	-43	NA	47895812	47891228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47891582_47893899_47893959_47895702
transcript_60045.known	chr17	-	374	2	FSM	ENSG00000264920.3	ENST00000577279.2	470	2	47	49	23	-46	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCTTCA	15	True	NA	NA	False	NA	NA	NA	47895769	47891274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47891582_47895702
transcript_60048.known	chr17	+	3026	7	FSM	ENSG00000167182.16	ENST00000376741.5	3026	7	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	35.3270434653114	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTTCGGCTTCCTT	-1	True	NA	12	True	AATAAA	-28	NA	47896235	47928957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47896294_47915311_47915389_47916155_47917131_47922961_47923275_47924918_47925094_47925347_47925542_47927723
transcript_60055.known	chr17	-	1225	3	FSM	ENSG00000234494.8	ENST00000451140.6	1225	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGCCCAAATCTTATAA	NA	False	NA	NA	False	CATAAA	-17	NA	47941410	47898273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47899304_47918451_47918572_47941335
transcript_60057.known	chr17	+	1862	14	FSM	ENSG00000108465.15	ENST00000584991.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	172.782895548381	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGGACTTAATAAAAGAGG	11	True	NA	-4	True	NA	NA	NA	47971048	47981741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974036_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_60068.nic	chr17	+	2877	12	NIC	ENSG00000108465.15	novel	2759	12	NA	NA	-18	0	intron_retention	FALSE	canonical	0	0	junction_4	175.295594509804	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	NA	False	NA	27	True	AATAAA	-17	NA	47970989	47981772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974036_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_60074.known	chr17	+	3417	7	FSM	ENSG00000108439.11	ENST00000642017.2	3417	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	2.98607881119482	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTCAACCCGGCCTG	-9	True	NA	30	True	AATAAA	-23	NA	47941570	47949308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_60075.known	chr17	+	2256	6	FSM	ENSG00000108439.11	ENST00000225573.5	2256	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.0010526024218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTTTTCAGACTACTC	-13	True	NA	2	True	ATTAAA	-13	NA	47941566	47948272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945558_47945613_47946322_47946394_47946613
transcript_60077.known	chr17	-	1524	2	FSM	ENSG00000167183.3	ENST00000300557.3	1524	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTTCAAGCTTCAG	-26	True	NA	NA	False	AGTAAA	-20	NA	47957883	47951966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47953264_47957656
transcript_60078.known	chr17	+	2759	12	FSM	ENSG00000108465.15	ENST00000584063.5	2759	12	0	0	0	0	multi-exon	FALSE	canonical	2	399	junction_4	82.9907890936107	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	23	False	NA	27	True	AATAAA	-17	NA	47971103	47981772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_60079.known	chr17	+	1834	14	FSM	ENSG00000108465.15	ENST00000338399.9	1834	14	0	0	0	0	multi-exon	FALSE	canonical	2	326	junction_5	107.10554436226	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	-4	True	NA	36	True	AATAAA	-26	NA	47971112	47981781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_60080.known	chr17	+	2519	13	FSM	ENSG00000108465.15	ENST00000585163.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	2	351	junction_6	96.0538043667888	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	8	True	NA	23	True	AATAAA	-13	NA	47971124	47981768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_60081.known	chr17	+	2609	13	FSM	ENSG00000108465.15	ENST00000580287.5	2609	13	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_12	164.288596851868	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	10	True	NA	27	True	AATAAA	-17	NA	47971126	47981772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436_47981460_47981586
transcript_60082.known	chr17	+	709	5	FSM	ENSG00000108465.15	ENST00000583182.5	709	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	246.923064941289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTCTGGGAGCGAATA	-8	True	NA	NA	False	NA	NA	NA	47971131	47974789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971172_47971361_47971408_47973518_47973651_47973930_47974032_47974399
transcript_60083.known	chr17	+	2684	11	FSM	ENSG00000108465.15	ENST00000584168.5	2684	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	181.625548863589	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGACTTAATAAAAGAGGA	222	False	NA	-3	True	NA	NA	NA	47971361	47981742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971408_47973518_47973651_47973930_47974036_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_60084.known	chr17	+	852	7	FSM	ENSG00000108465.15	ENST00000583697.1	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	215.560316384997	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	5582	False	NA	23	True	AATAAA	-13	NA	47976721	47981768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436_47981460_47981586
transcript_60087.nnic	chr17	-	656	3	NNC	ENSG00000263412.2	novel	566	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	7710	False	NA	-12	True	AATAAA	-18	NA	48048091	48046880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48046971_48047208_48047308_48047624
transcript_60090.nnic	chr17	-	1001	2	NNC	ENSG00000263412.2	novel	566	2	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	7682	False	NA	-12	True	AATAAA	-18	NA	48048119	48046880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48046971_48047208
transcript_60091.known	chr17	-	539	2	FSM	ENSG00000263412.2	ENST00000584428.2	566	2	25	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-13	True	NA	-12	True	AATAAA	-18	NA	48048073	48046880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48046971_48047624
transcript_60092.known	chr17	+	4672	5	FSM	ENSG00000082641.16	ENST00000357480.9	4672	5	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	38.8651514856176	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGTGCACTTTTTC	5	True	NA	-9	True	AATAAA	-17	NA	48048369	48061479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057343_48057503_48058294
transcript_60097.known	chr17	+	2051	4	FSM	ENSG00000082641.16	ENST00000583378.5	2051	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	124.340929169227	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGCCGACAGAGGGGAA	-9	True	NA	NA	False	NA	NA	NA	48054691	48059936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48054762_48056418_48056599_48057343_48057503_48058294
transcript_60098.known	chr17	+	1998	4	FSM	ENSG00000082641.16	ENST00000582155.5	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	114.737381296013	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGGCCAGACCATTTA	102	False	NA	NA	False	NA	NA	NA	48054674	48059833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48054762_48056385_48056599_48057343_48057503_48058294
transcript_60101.known	chr17	+	2172	4	FSM	ENSG00000082641.16	ENST00000536222.5	2172	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	111.547697819762	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGTTTGAAGCCCACCA	9	True	NA	NA	False	NA	NA	NA	48054709	48059653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48055151_48056385_48056599_48057343_48057503_48058294
transcript_60105.nic	chr17	+	252	2	ISM	ENSG00000082641.16	ENST00000584137.5	529	3	-30	642	0	-317	5prime_fragment	FALSE	canonical	3	217	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCAGCTGTTCCTGAGA	-2	True	NA	NA	False	AATAAA	-28	NA	48048328	48050724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_48048463_48050606
transcript_60106.nic	chr17	+	223	2	ISM	ENSG00000082641.16	ENST00000585062.1	556	3	-26	694	-15	-319	5prime_fragment	FALSE	canonical	3	16	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAGCTGTTCCTGA	393	False	NA	NA	False	AATAAA	-26	NA	48048757	48050722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_48048865_48050606
transcript_60107.known	chr17	+	4839	6	FSM	ENSG00000082641.16	ENST00000362042.8	4839	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	94.0370139891734	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGACTGGCCATTGCGT	-6	True	NA	28	True	AATAAA	-19	NA	48048358	48061545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057031_48057122_48057343_48057503_48058294
transcript_60109.known	chr17	-	2422	5	FSM	ENSG00000108468.15	ENST00000393408.7	2422	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	251.1527174848	5812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTAAGTCTTACC	-14	True	NA	-7	True	AATAAA	-23	NA	48101198	48070051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48100754
transcript_60117.nic	chr17	-	807	3	ISM	ENSG00000108468.15	ENST00000393408.7	2422	5	-14	5955	-14	-918	5prime_fragment	FALSE	canonical	3	6	junction_2	323	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGTAAGAATAGAAGT	231	False	NA	NA	False	AAGAAA	-1	NA	48101212	48076006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_48076179_48076864_48077042_48100754
transcript_6012.known	chr1	+	2890	11	FSM	ENSG00000125703.15	ENST00000371120.7	2890	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	48.0141645767163	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTCTTTAGTCTAAA	-16	True	NA	10	True	AATAAA	-15	NA	62784134	62865513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62784226_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_60122.known	chr17	+	2733	8	FSM	ENSG00000002919.15	ENST00000393405.6	2733	8	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	57.7432741909022	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGGTATTCATCC	15	False	NA	10	True	AATAAA	-24	NA	48107557	48123074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107839_48110707_48110768_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_60126.known	chr17	+	922	8	FSM	ENSG00000002919.15	ENST00000584335.5	922	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.0102032553912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGTGCCTTTGGACCCT	120	False	NA	NA	False	NA	NA	NA	48107893	48121458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107980_48110707_48110768_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_60128.nic	chr17	+	2130	7	NIC	ENSG00000002919.15	novel	2733	8	NA	NA	-19	-329	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	54.0907159830183	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTGTTGCAATTTGTG	6719	False	NA	14	True	AATAAA	-15	NA	48107529	48122745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_48107597_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_60129.known	chr17	+	1200	7	FSM	ENSG00000002919.15	ENST00000580219.5	1200	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	63.5837155951812	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATCTCCTCAGGTGACC	6	True	NA	NA	False	NA	NA	NA	48107548	48121808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107597_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_60133.known	chr17	+	2992	7	FSM	ENSG00000002919.15	ENST00000359238.7	2992	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	13.30935343617	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCTCAGTTAATCTA	-8	True	NA	NA	False	NA	NA	NA	48107765	48123601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107839_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_60135.known	chr17	+	1282	7	FSM	ENSG00000002919.15	ENST00000582104.5	1282	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	44.9172077889483	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTTATGTTGTATCC	14	True	NA	NA	False	NA	NA	NA	48107787	48121887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107839_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_60136.nnic	chr17	+	2181	7	NIC	ENSG00000002919.15	novel	922	8	NA	NA	-32	-329	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	58.4677023853531	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTGTTGCAATTTGTG	88	False	NA	14	True	AATAAA	-15	NA	48107861	48122745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_48107980_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_60141.known	chr17	-	682	3	FSM	ENSG00000141293.16	ENST00000579476.5	682	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTGTGATGATGTTGA	14	False	NA	-9	True	AATAAA	-19	NA	48162670	48133445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48133817_48137228_48137338_48162468
transcript_60142.known	chr17	+	701	2	FSM	ENSG00000264451.1	ENST00000579972.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGCATCCTTGCCTTA	32	False	NA	NA	False	AATAAA	-21	NA	48460369	48466040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48460477_48465446
transcript_60143.known	chr17	-	382	2	FSM	ENSG00000159182.5	ENST00000290294.5	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGAAAGTTAACTGTG	-1	True	NA	NA	False	AATAAA	-20	NA	48722518	48721718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48721900_48722317
transcript_60144.known	chr17	+	560	2	FSM	ENSG00000229637.4	ENST00000422730.4	560	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTGTTTGCTCTGAA	-3	True	NA	NA	False	AATAAA	-15	NA	48723184	48724758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48723314_48724327
transcript_60145.known	chr17	+	504	2	FSM	ENSG00000229637.4	ENST00000432056.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCACATCTTTTGTTTG	504	False	NA	NA	False	AATAAA	-8	NA	48723691	48724751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48723772_48724327
transcript_60146.known	chr17	-	3039	2	FSM	ENSG00000159184.8	ENST00000290295.8	3039	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGAATCTTAGAGATT	-4	True	NA	NA	False	AATAAA	-17	NA	48728750	48724762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48727044_48727992
transcript_60148.nic	chr17	-	1008	7	ISM	ENSG00000170703.16	ENST00000393382.8	3573	16	136	34752	-16	144	5prime_fragment	FALSE	non_canonical	0	0	junction_5	2.51661147842358	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTCAAGACATTGTGAG	-6	True	NA	NA	False	ATTAAA	-26	NA	48817093	48796985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_48797205_48799603_48799761_48801254_48801386_48801524_48801644_48803890_48803929_48804771_48804992_48816969
transcript_60154.known	chr17	+	1396	12	FSM	ENSG00000136436.15	ENST00000508679.5	1396	12	0	0	0	0	multi-exon	TRUE	canonical	3	4	junction_1	38.0167427230783	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGCTACCTTTAAGTCG	-2	True	NA	NA	False	NA	NA	NA	48831034	48863196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48831079_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_60157.known	chr17	+	759	4	FSM	ENSG00000159199.14	ENST00000513781.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1287.00228783359	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAACCCCTGTCTG	8	True	NA	28	True	ATTAAA	-8	NA	48892853	48895861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48893126_48894348_48894450_48895155_48895335_48895654
transcript_6016.known	chr1	+	2944	11	FSM	ENSG00000125703.15	ENST00000317868.9	2944	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	48.0141645767163	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTTAGTCTAAATAC	-19	True	NA	13	True	AATAAA	-18	NA	62784131	62865516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62784274_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_60165.known	chr17	+	598	5	FSM	ENSG00000159199.14	ENST00000355938.9	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	380.723899302368	16724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	NA	False	NA	38	True	ATTAAA	-18	NA	48892764	48895871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_60166.known	chr17	+	646	5	FSM	ENSG00000159199.14	ENST00000393366.7	646	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	1006.11704090528	7560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	-4	True	NA	38	True	ATTAAA	-18	NA	48892786	48895871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892911_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_60167.known	chr17	+	468	4	FSM	ENSG00000159199.14	ENST00000506855.1	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	1044.73962731816	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	-1	True	NA	38	True	ATTAAA	-18	NA	48892816	48895871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48893457_48895155_48895335_48895654
transcript_60168.known	chr17	+	539	5	FSM	ENSG00000159199.14	ENST00000503641.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1071.53006840686	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	6	True	NA	38	True	ATTAAA	-18	NA	48892796	48895871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895182_48895335_48895654
transcript_60169.known	chr17	+	2214	3	FSM	ENSG00000159199.14	ENST00000513347.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	324	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	-2	True	NA	35	True	ATTAAA	-15	NA	48892766	48895868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48895335_48895654
transcript_60170.known	chr17	+	359	4	FSM	ENSG00000159199.14	ENST00000514808.5	359	4	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	439.360393703797	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCATCTCCCACTGTA	11	True	NA	NA	False	NA	NA	NA	48892801	48895349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155
transcript_60171.known	chr17	+	301	2	FSM	ENSG00000270781.1	ENST00000603088.1	301	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAATTTCAACCGATAGG	24	False	NA	NA	False	NA	NA	NA	48899130	48899748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48899232_48899548
transcript_60173.known	chr17	-	951	8	FSM	ENSG00000159210.10	ENST00000290330.7	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	534.014828197396	1161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCTTCCCTCAT	3	True	NA	29	True	AATAAA	-45	NA	48944810	48930373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48930613_48931642_48931715_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_60174.known	chr17	-	716	6	FSM	ENSG00000159224.4	ENST00000357424.2	716	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.58693797647189	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	-2	True	NA	-1	True	ATTAAA	-19	NA	48968596	48958553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48958717_48960885_48960988_48961726_48961820_48964309_48964481_48967146_48967254_48968516
transcript_60176.nnic	chr17	-	459	4	NNC	ENSG00000159224.4	novel	716	6	NA	NA	6579	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	4.54606056566195	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	6577	False	NA	-1	True	ATTAAA	-19	NA	48962017	48958553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48958717_48960885_48960988_48961726_48961820_48961916
transcript_60178.nnic	chr17	-	651	3	NNC	ENSG00000159224.4	novel	716	6	NA	NA	6925	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	-13	True	NA	-1	True	ATTAAA	-19	NA	48961671	48958553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48958717_48960605_48960988_48961565
transcript_60179.nnic	chr17	-	371	3	NNC	ENSG00000159224.4	novel	716	6	NA	NA	6925	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	-13	True	NA	-1	True	ATTAAA	-19	NA	48961671	48958553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48958717_48960885_48960988_48961565
transcript_60180.nnic	chr17	-	1218	2	NNC	ENSG00000159224.4	novel	716	6	NA	NA	6936	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	-2	True	NA	-1	True	ATTAAA	-19	NA	48961660	48958553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48958717_48960605
transcript_60181.nic	chr17	-	407	2	ISM	ENSG00000159224.4	ENST00000357424.2	716	6	7467	0	7467	0	3prime_fragment	FALSE	canonical	3	12	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	7465	False	NA	-1	True	ATTAAA	-19	NA	48961129	48958553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_48958717_48960885
transcript_60184.nnic	chr17	-	570	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	407	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	13	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTTGAGTAGAAAGAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	48997085	48995265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48995583_48996417_48996492_48996906
transcript_60185.nnic	chr17	-	462	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	357	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTTGAGTAGAAAGAGA	NA	False	NA	-8	True	ATTAAA	-16	NA	48997135	48995265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48995583_48996417_48996492_48997064
transcript_60186.known	chr17	+	8796	15	FSM	ENSG00000159217.10	ENST00000290341.8	8796	15	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_10	103.841642584725	560	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	0	True	NA	23	True	AATAAA	-24	NA	48997384	49056145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043966_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
transcript_60187.known	chr17	+	1629	8	FSM	ENSG00000108798.9	ENST00000225941.6	1629	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.81725406168211	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGTGTGTGGTGTG	-2	True	NA	5	True	NA	NA	NA	49210706	49223225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49210842_49216530_49216699_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_60191.known	chr17	-	993	4	FSM	ENSG00000167083.7	ENST00000507680.6	993	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCATGATTTCTTTAA	-1	True	NA	NA	False	NA	NA	NA	49210574	49206236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49206883_49207338_49207445_49208844_49208955_49210443
transcript_60194.known	chr17	-	889	4	FSM	ENSG00000167083.7	ENST00000300406.6	889	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATAAAGCATTTCCACG	-1	True	NA	NA	False	NA	NA	NA	49209385	49206388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49206883_49207338_49207445_49208844_49208955_49209206
transcript_60199.nic	chr17	-	890	2	ISM	ENSG00000198740.9	ENST00000362063.6	5988	6	-38	22628	-38	-22628	5prime_fragment	FALSE	canonical	3	5	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAGAAGATAGTAGAGAAAG	NA	False	NA	NA	False	AAGAAA	-3	NA	49362511	49317192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_49317984_49362412
transcript_60203.known	chr17	-	1908	8	FSM	ENSG00000167085.13	ENST00000614445.5	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	1533.3864483554	2856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-3	True	NA	-32	True	AATAAA	-4	NA	49414884	49404071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414241_49414334_49414834
transcript_60210.known	chr17	-	1834	7	FSM	ENSG00000167085.13	ENST00000300408.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	3120	junction_6	286.33119906073	13580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-1	True	NA	-12	True	AATAAA	-24	NA	49414882	49404051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_60211.known	chr17	+	963	2	FSM	ENSG00000250186.3	ENST00000506504.3	963	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAGCCTAAAAGAATGGA	NA	False	NA	NA	False	NA	NA	NA	49404080	49405197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49404623_49404776
transcript_60212.known	chr17	-	1885	7	FSM	ENSG00000167085.13	ENST00000617874.5	1885	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_6	1361.07224887831	2596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	38	False	NA	-32	True	AATAAA	-4	NA	49414858	49404071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414739
transcript_60213.known	chr17	+	5635	2	FSM	ENSG00000182575.8	ENST00000328741.6	5635	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTCTAAGATGGGT	23	True	NA	28	True	AATAAA	-18	NA	49575870	49583827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49576274_49578595
transcript_60219.known	chr17	-	1860	12	FSM	ENSG00000121067.19	ENST00000509079.6	1860	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	83.0666365979897	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAGAAGGGAAAAGGAA	-13	True	NA	-10	True	AAAAAG	-30	NA	49678110	49599989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49677932
transcript_60222.known	chr17	-	2965	11	FSM	ENSG00000121067.19	ENST00000347630.6	2965	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	69.8730277002507	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTCTGTCATTGACT	9489	False	NA	NA	False	AATAAA	-18	NA	49678163	49598885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49677932
transcript_60224.known	chr17	-	2985	11	FSM	ENSG00000121067.19	ENST00000393328.6	2985	11	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_9	76.0168402395153	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-13	True	NA	NA	False	AATAAA	-20	NA	49678110	49598883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49675894_49676017_49677932
transcript_60229.known	chr17	-	1707	11	FSM	ENSG00000121067.19	ENST00000513080.6	1707	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	79.3463294677202	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGTGGTACTTCGGAGAC	-16	True	NA	-113	True	NA	NA	NA	49678113	49600092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49620620_49620671_49621945_49622068_49622732_49622877_49677932
transcript_60234.known	chr17	-	2850	10	FSM	ENSG00000121067.19	ENST00000504102.6	2850	10	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	20.3348511880345	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	0	True	NA	NA	False	AATAAA	-20	NA	49678097	49598883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49677932
transcript_60240.known	chr17	+	3588	16	FSM	ENSG00000136504.13	ENST00000675278.1	3588	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	155.832160423393	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCTGTTTCATCTG	NA	False	NA	13	True	AATAAA	-12	NA	49788647	49829090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823236_49825505_49825543_49825999_49826147_49826692_49826800_49827400
transcript_60241.known	chr17	+	3469	14	FSM	ENSG00000136504.13	ENST00000424009.6	3469	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	138.118977953813	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	20	False	NA	19	True	AATAAA	-18	NA	49788705	49829096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_60242.known	chr17	+	1774	13	FSM	ENSG00000136504.13	ENST00000454930.6	1774	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	156.383853777243	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCCTGGATGGGATCT	-5	True	NA	NA	False	NA	NA	NA	49788680	49827703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49788850_49791885_49792034_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_60250.known	chr17	+	1289	9	FSM	ENSG00000136504.13	ENST00000512616.5	1289	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	142.579309070426	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATTGGCAAGTACAGT	140	False	NA	NA	False	NA	NA	NA	49815389	49827584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49815613_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_60262.known	chr17	-	1320	9	FSM	ENSG00000121073.15	ENST00000507773.6	1320	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_7	94.1540459831653	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCAAGCAAAATCACA	7048	False	NA	-33	True	AATAAA	-2	NA	49708090	49701338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707729
transcript_60263.known	chr17	-	1615	9	FSM	ENSG00000121073.15	ENST00000240333.12	1615	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_7	65.3604190240546	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTTTTCTTAGG	7174	False	49707987	-17	True	ATTAAA	-13	NA	49707964	49700942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49707729
transcript_60264.known	chr17	-	529	3	FSM	ENSG00000121073.15	ENST00000508607.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	96	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAGAACCATAGAACTT	16	True	NA	NA	False	AAAAAG	-27	NA	49707920	49706075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49706310_49706964_49707069_49707729
transcript_60266.known	chr17	-	657	5	FSM	ENSG00000176358.16	ENST00000436235.6	718	5	52	9	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.77263412660235	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGAATGGCTCCTTCT	2316	False	NA	-7	True	AATAAA	-7	NA	49848017	49838308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49838674_49839849_49839910_49841551_49841585_49844063_49844158_49847912
transcript_60267.known	chr17	-	624	4	FSM	ENSG00000176358.16	ENST00000398154.5	624	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.09120616516523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGAATGGCTCCTTCT	2316	False	NA	-7	True	AATAAA	-7	NA	49848017	49838308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49838674_49839849_49839910_49844063_49844158_49847912
transcript_60269.known	chr17	-	597	4	FSM	ENSG00000176358.16	ENST00000326219.5	597	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGAATGGCTCCTTCT	2316	False	NA	-7	True	AATAAA	-7	NA	49848017	49838308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49838674_49841551_49841585_49844063_49844158_49847912
transcript_60272.known	chr17	-	564	3	FSM	ENSG00000176358.16	ENST00000352793.6	564	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGAATGGCTCCTTCT	2316	False	NA	-7	True	AATAAA	-7	NA	49848017	49838308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49838674_49844063_49844158_49847912
transcript_60273.known	chr17	+	2018	3	FSM	ENSG00000108813.11	ENST00000240306.5	2018	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTGTGAGATGTGTT	-6	True	NA	12	True	ATTAAA	-20	NA	49969189	49974959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49969752_49973072_49973270_49973700
transcript_60275.known	chr17	+	3364	11	FSM	ENSG00000005882.12	ENST00000503176.6	3364	11	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_4	36.9866192020844	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAATGGGCCCTGAG	-23	True	NA	NA	False	NA	NA	NA	50095350	50112152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884_50106070_50106793_50106884_50107075_50107154_50108155_50108233_50108318_50108418_50108611_50108720_50109286_50109401_50109956
transcript_60276.known	chr17	+	865	4	FSM	ENSG00000005882.12	ENST00000505897.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	16.5730705262081	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTGTTTAGAGTTT	13	True	NA	NA	False	TATAAA	-22	NA	50095386	50106368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884
transcript_60277.known	chr17	-	547	2	FSM	ENSG00000253730.1	ENST00000523083.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCTAGTTGGGCTTT	5080	False	NA	-1	True	AATAAA	-18	NA	50161276	50158332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50158624_50161020
transcript_60278.known	chr17	+	1429	10	FSM	ENSG00000108823.17	ENST00000262018.8	1429	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.62936879248872	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	-12	True	NA	30	True	NA	NA	NA	50166004	50175928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50169091_50169255_50170142_50170352_50170639_50170667_50175256_50175450_50175711
transcript_60280.known	chr17	+	1090	9	FSM	ENSG00000108823.17	ENST00000513821.5	1090	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.73575857852991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGAACCCAGGCTC	-13	True	NA	NA	False	NA	NA	NA	50166003	50175797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50169091_50169255_50170639_50170667_50175256_50175450_50175711
transcript_60283.known	chr17	+	1057	8	FSM	ENSG00000108823.17	ENST00000344627.10	1057	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	1.98976975388345	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	-12	True	NA	30	True	NA	NA	NA	50166004	50175928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50170639_50170667_50175256_50175450_50175711
transcript_60287.known	chr17	+	672	6	FSM	ENSG00000108823.17	ENST00000511303.6	672	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.99332590941915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	24	True	NA	30	True	NA	NA	NA	50166040	50175928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50166078_50167946_50168020_50168373_50168573_50170639_50170667_50175256_50175376_50175711
transcript_60288.known	chr17	+	494	2	FSM	ENSG00000108823.17	ENST00000505964.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	8707	False	NA	30	True	NA	NA	NA	50175172	50175928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50175450_50175711
transcript_603.known	chr1	+	566	2	FSM	ENSG00000237491.10	ENST00000457084.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAAAAAACAGAAGAAGT	NA	False	NA	NA	False	CATAAA	-1	NA	778781	782191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_779093_781936
transcript_60303.known	chr17	+	1272	6	FSM	ENSG00000249406.3	ENST00000654981.1	1272	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	3.55527776692624	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGATTTATAGAAAAGT	6525	False	NA	NA	False	AATAAA	-24	NA	50208129	50215423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50208199_50209335_50209407_50213834_50213916_50214100_50214776_50214919_50214983_50215110
transcript_60308.known	chr17	-	5914	51	FSM	ENSG00000108821.14	ENST00000225964.10	5914	51	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_44	61.4258089079826	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATCCGCAGTGGCCTCC	-1	True	NA	-10	True	AATAAA	-21	NA	50201631	50184100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50185649_50185777_50186021_50186316_50186508_50186639_50186923_50187014_50187123_50187483_50187538_50187875_50187984_50188095_50188150_50188529_50188638_50188741_50188796_50188902_50189011_50189167_50189276_50189376_50189539_50189678_50189733_50189858_50189913_50190000_50190109_50190326_50190381_50190542_50190597_50190816_50190925_50191382_50191491_50191787_50191887_50191979_50192025_50192474_50192529_50192639_50192694_50192796_50192851_50192993_50193048_50193942_50194042_50194129_50194184_50194348_50194448_50194572_50194627_50194720_50194829_50195046_50195101_50195231_50195331_50195433_50195479_50195566_50195666_50195922_50195977_50196154_50196200_50196313_50196368_50196483_50196529_50196616_50196671_50197009_50197064_50197179_50197234_50197731_50197786_50197948_50198003_50198160_50198206_50198432_50198505_50199225_50199328_50199417_50199454_50199555_50199591_50199752_50199948_50201410
transcript_60312.nnic	chr17	+	982	5	NNC	ENSG00000167105.8	novel	2693	5	NA	NA	-23	677	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	102.27780795461	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTGATTGCGGCTGAG	16	False	NA	37	True	GATAAA	-18	NA	50274442	50279793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278955_50279194
transcript_60313.known	chr17	+	2693	5	FSM	ENSG00000167105.8	ENST00000507382.2	2693	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	19.6468827043885	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAAAGCATCCATCAC	-13	True	NA	19	True	AATAAA	-19	NA	50274465	50281485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278997_50279194
transcript_60315.nnic	chr17	+	857	4	NIC	ENSG00000167105.8	novel	2693	5	NA	NA	-52	677	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	110.460651616562	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTACTGATTGCGGCTGAG	5345	False	NA	37	True	GATAAA	-18	NA	50274413	50279793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_50274571_50277714_50277741_50278555_50278631_50279194
transcript_60318.known	chr17	+	3507	11	FSM	ENSG00000015532.10	ENST00000017003.7	3507	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	15.7254570680791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCATCACCATTCATTG	4	True	NA	42	True	NA	NA	NA	50346125	50361185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50346276_50353629_50354123_50354407_50354584_50354853_50355057_50355500_50355582_50355780_50355998_50356084_50356262_50356510_50356774_50357056_50357253_50358206_50358541_50359968
transcript_60319.nnic	chr17	+	1125	3	NNC	ENSG00000015532.10	novel	2107	10	NA	NA	-34	-5593	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCATTGGGAATACGAT	NA	False	NA	NA	False	AATAAA	-21	NA	50346091	50348081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_50346276_50346815_50346935_50347259
transcript_60322.nnic	chr17	+	380	2	NNC	ENSG00000015532.10	novel	2107	10	NA	NA	-27	-5596	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTGCATTGGGAATAC	NA	False	NA	NA	False	AATAAA	-18	NA	50346098	50348078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_50346276_50347875
transcript_60323.known	chr17	+	2174	1	FSM	ENSG00000015532.10	ENST00000571021.1	2174	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGCTCTGTGTTTTTC	536	False	NA	8	True	AATATA	-15	NA	50358977	50361151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50359000_50361200
transcript_60330.known	chr17	-	686	4	FSM	ENSG00000108826.16	ENST00000225969.9	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_3	124.115537571517	12276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	3	True	NA	-14	True	AATAAA	-38	NA	50373184	50367866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50373130
transcript_60331.known	chr17	-	2441	3	FSM	ENSG00000108826.16	ENST00000442592.3	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_2	20	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	9832	False	NA	-15	True	AATAAA	-37	NA	50373207	50367867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50370100_50370454_50370587_50373130
transcript_60332.known	chr17	-	869	4	FSM	ENSG00000108826.16	ENST00000511860.1	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	682.416783693563	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCATGCTATTTAGGGAC	2024	False	NA	-35	True	AATAAA	-17	NA	50371163	50367887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50370905
transcript_60333.known	chr17	-	742	5	FSM	ENSG00000108826.16	ENST00000503633.5	742	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	684.646076451184	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	-9	True	NA	-15	True	AATAAA	-37	NA	50373196	50367867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50368314_50368837_50368868_50370031_50370100_50370454_50370587_50373130
transcript_60335.known	chr17	+	2330	9	FSM	ENSG00000154920.15	ENST00000338165.9	2330	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	8.38152730712011	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTAGTGATTCTGA	-7	True	NA	38	True	AATAAA	-42	NA	50373228	50381483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50373278_50375184_50375984_50376065_50376194_50378594_50378682_50378773_50378896_50379106_50379225_50379451_50379568_50380311_50380502_50380762
transcript_60346.nic	chr17	+	1651	2	ISM	ENSG00000154920.15	ENST00000511711.5	679	4	-219	-387	-197	387	intron_retention	FALSE	canonical	3	84	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCAGATGTCATTTGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	50373022	50376580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_50373278_50375184
transcript_60347.known	chr17	-	2880	7	FSM	ENSG00000108829.10	ENST00000225972.8	2880	7	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_1	36.9082947617771	2586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTGTTCCTTTGTGT	-13	True	NA	-6	True	ATTAAA	-17	NA	50397523	50381237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50383236_50385117_50385292_50388059_50388133_50392397_50392503_50392738_50392898_50394928_50394989_50397212
transcript_60348.known	chr17	+	2177	16	FSM	ENSG00000167107.13	ENST00000300441.9	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	12.9020239583649	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	-6	True	NA	15	True	CATAAA	-21	NA	50426217	50474837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_60349.nic	chr17	+	2156	16	NIC	ENSG00000167107.13	novel	2177	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	22.5402356292525	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTCTTGCTGGTGGG	-9	True	NA	9	True	CATAAA	-15	NA	50426214	50474831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50464217_50464295_50464525_50464600_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_60356.known	chr17	+	594	6	FSM	ENSG00000167107.13	ENST00000506582.5	594	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	19.3556193390963	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGACCACAGTCATCTC	-6	True	NA	NA	False	NA	NA	NA	50426217	50462426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50426390_50460676_50460873_50461241_50461288_50461632_50461687_50462183_50462303_50462419
transcript_60357.nic	chr17	+	1295	6	ISM	ENSG00000167107.13	ENST00000300441.9	2177	16	-3	11796	-3	0	5prime_fragment	FALSE	canonical	3	50	junction_3	3.72021504754765	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGGCAACAATCCCTGT	-9	True	NA	NA	False	AATATA	-14	NA	50426214	50463041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419
transcript_60360.known	chr17	+	701	2	FSM	ENSG00000167107.13	ENST00000506052.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGGCAACAATCCCTGT	918	False	NA	NA	False	AATATA	-14	NA	50462238	50463041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50462318_50462419
transcript_60362.known	chr17	+	2467	9	FSM	ENSG00000136444.10	ENST00000258955.7	2467	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	19.8997487421324	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTGTGGTCCTCTCC	2	True	NA	14	True	AATAAA	-16	NA	50478859	50485974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50479020_50479628_50479763_50479879_50480085_50482090_50482457_50482642_50482707_50483339_50483488_50483705_50483761_50484441_50484546_50484743
transcript_60366.known	chr17	-	368	2	FSM	ENSG00000250107.1	ENST00000508920.1	368	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAATGGGACGACAGTGG	6443	False	NA	NA	False	NA	NA	NA	50559410	50557173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50557459_50559327
transcript_60367.known	chr17	+	1881	12	FSM	ENSG00000108846.16	ENST00000427699.5	1881	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.642824346533225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGGCCTTTGTGTCTGTG	-28	True	NA	NA	False	NA	NA	NA	50634856	50667923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50634982_50655831_50656009_50656701_50656828_50657045_50657184_50658081_50658208_50658434_50658497_50659236_50659369_50660922_50661115_50663680_50663859_50663949_50664112_50665152_50665246_50667553
transcript_60369.known	chr17	+	575	2	FSM	ENSG00000108846.16	ENST00000508929.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAGGAAATGACACCAAA	NA	False	NA	NA	False	AATATA	-39	NA	50687308	50691244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50687731_50691091
transcript_60370.known	chr17	-	4166	5	FSM	ENSG00000154945.7	ENST00000285243.7	4166	5	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	43.4647845962683	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCCTATATGCCTTCATT	-22	True	NA	-17	True	ATTAAA	-18	NA	50707914	50693197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
transcript_60380.known	chr17	+	1972	11	FSM	ENSG00000108848.16	ENST00000240304.5	1972	11	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_10	79.0364472885769	3268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	-10	True	NA	23	True	AATAAA	-14	NA	50719602	50752709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750695_50752199
transcript_60381.known	chr17	+	1112	9	FSM	ENSG00000108848.16	ENST00000508045.5	1112	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	309.470288355764	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTGTTTGTTT	NA	False	NA	22	True	ATTAAA	-22	NA	50719569	50744813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50738136_50738200_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
transcript_60382.known	chr17	+	6987	10	FSM	ENSG00000108848.16	ENST00000505658.6	6987	10	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_7	59.5572139072595	2668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGTGTAGGTAGTTAC	-10	True	NA	32	True	AATAAA	-26	NA	50719602	50756219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500
transcript_60383.known	chr17	+	2284	11	FSM	ENSG00000108848.16	ENST00000393227.6	2284	11	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_10	157.826772126911	2597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCTTGTTACACTCAAT	-14	True	NA	7	True	AATAAA	-13	NA	50719598	50751617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746
transcript_60384.known	chr17	+	533	4	FSM	ENSG00000108848.16	ENST00000508218.5	533	4	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_2	35.9660333586504	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCAGAGACCTCCCTAA	-16	True	NA	NA	False	NA	NA	NA	50719596	50741292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101
transcript_60385.known	chr17	+	840	7	FSM	ENSG00000108848.16	ENST00000504563.6	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	282.518091849393	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGTCCACAACGTCGGT	-14	True	NA	NA	False	ATTAAA	-17	NA	50719598	50743792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101_50741247_50741656_50741732_50743705
transcript_60386.known	chr17	+	561	5	FSM	ENSG00000108848.16	ENST00000507503.1	561	5	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_3	27.0046292327816	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTAAGTTTTTTTGTT	3300	False	NA	17	True	ATTAAA	-17	NA	50740266	50744808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
transcript_60387.known	chr17	-	1467	3	FSM	ENSG00000141232.5	ENST00000268957.3	1467	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAAAATGTATCGTA	-1	False	NA	NA	False	NA	NA	NA	50867978	50862979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50864164_50867493_50867603_50867804
transcript_60388.known	chr17	+	1351	2	FSM	ENSG00000229980.5	ENST00000416263.3	1351	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTATTTGTTTGTTTT	350	False	NA	21	True	TATAAA	-18	NA	50866678	50868307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50867218_50867495
transcript_60389.nnic	chr17	+	1144	3	Antisense	novelGene_ENSG00000247011.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCGTGGGTTTTTTTGTG	NA	False	NA	NA	False	CATAAA	-15	NA	50917584	50938088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_50917795_50918046_50918197_50937304
transcript_60394.known	chr17	-	1298	3	FSM	ENSG00000008294.22	ENST00000511987.5	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	7.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTACATGTCAGGCTT	864	False	NA	NA	False	NA	NA	NA	51046837	51030913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_51031723_51041500_51041652_51046499
transcript_60396.known	chr17	-	4949	27	FSM	ENSG00000008294.22	ENST00000510283.5	4949	27	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	55.5487951179254	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATAGGTTGG	0	True	NA	NA	False	AGTAAA	-37	NA	51046878	50965074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50966388_50970706_50970857_50974770_50974948_50975862_50975902_50977107_50977222_50979745_50979918_50982523_50982673_50984922_50984991_50985697_50985779_50987111_50987238_50989676_50989873_50990449_50990669_50993763_50993936_50995056_50995225_50995443_50995534_50996564_50996695_50998443_50998618_50999660_50999718_51001714_51001846_51005211_51005264_51006084_51006238_51007268_51007327_51014231_51014354_51020158_51020259_51021157_51021366_51041500_51041652_51046499
transcript_60400.known	chr17	+	796	6	FSM	ENSG00000239672.8	ENST00000013034.3	796	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1548.037648121	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGACCAGGCTGTAGGA	70	False	NA	NA	False	NA	NA	NA	51153664	51161898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153725_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_60405.known	chr17	+	850	5	FSM	ENSG00000243678.12	ENST00000514264.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	2863.09788515866	9024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	4226	False	NA	26	True	AATAAA	-17	NA	51165434	51171744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51165682_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_60409.known	chr17	+	749	5	FSM	ENSG00000243678.12	ENST00000503064.5	749	5	0	0	0	0	multi-exon	TRUE	canonical	3	370	junction_1	2727.74421454798	12285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	5	True	NA	26	True	AATAAA	-17	NA	51166417	51171744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51166564_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_60422.known	chr17	+	890	5	FSM	ENSG00000239672.8	ENST00000393196.8	890	5	0	0	0	0	multi-exon	FALSE	canonical	3	2690	junction_1	327.113512408155	24665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCATTCTTTGCCTGC	-36	True	NA	160	True	TATAAA	-29	NA	51153558	51162168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_60423.known	chr17	+	690	5	FSM	ENSG00000243678.12	ENST00000512737.6	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	4509	junction_1	993.013941241511	42949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-2	True	NA	26	True	AATAAA	-17	NA	51166410	51171744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_60424.known	chr17	+	986	6	FSM	ENSG00000239672.8	ENST00000336097.7	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	1510.05634331968	8717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCATTGCTTTTTT	-19	True	NA	53	True	ATTAAA	-43	NA	51153575	51162061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_60425.known	chr17	+	1021	8	FSM	ENSG00000011052.21	ENST00000393193.6	1021	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	2348.45255173595	8710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	-5	True	NA	26	True	AATAAA	-17	NA	51153589	51171744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_60426.known	chr17	+	781	5	FSM	ENSG00000239672.8	ENST00000475573.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1290.15018505599	4167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTCATTGAGTTGGTT	2	True	NA	27	True	ATTAAA	-17	NA	51153596	51162035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161097_51161273_51161727
transcript_60427.known	chr17	+	894	7	FSM	ENSG00000011052.21	ENST00000376392.10	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	2109.4924876746	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	9	True	NA	26	True	AATAAA	-17	NA	51153603	51171744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51171486
transcript_60428.known	chr17	+	692	5	FSM	ENSG00000243678.12	ENST00000513177.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2863.95500139231	5669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCCTTGTGCTTA	271	False	NA	25	True	AATAAA	-16	NA	51165814	51171743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51165905_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_60429.known	chr17	+	568	4	FSM	ENSG00000243678.12	ENST00000393183.7	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	2544.70971931094	1957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	7	True	NA	26	True	AATAAA	-17	NA	51166419	51171744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51171486
transcript_60430.known	chr17	+	1193	9	FSM	ENSG00000011052.21	ENST00000555572.1	1193	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	2798.82983360904	4596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCCTTGTGCTT	41	True	NA	24	True	AATAAA	-15	NA	51153635	51171742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_60431.known	chr17	+	1645	4	FSM	ENSG00000239672.8	ENST00000511355.5	1645	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1367.9242181739	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGGCTGGGTACGATGG	-14	True	NA	NA	False	AAAAAG	-4	NA	51153580	51162428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161097
transcript_60433.known	chr17	-	5365	17	FSM	ENSG00000011258.16	ENST00000586178.6	5365	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_13	11.6270159542335	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATTTGAGCAGTTCTT	18	True	NA	-5	True	AATAAA	-14	NA	51260049	51177424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_51180695_51192202_51192281_51192781_51193017_51193427_51193511_51195213_51195362_51201591_51201697_51202021_51202078_51202700_51202936_51203139_51203229_51203790_51203926_51206887_51207006_51217333_51217417_51218929_51219045_51220329_51220464_51225007_51225210_51259142_51259207_51259834
transcript_60435.known	chr17	-	3213	1	FSM	ENSG00000279089.1	ENST00000624148.1	3213	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	51186403	51183190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_51183200_51186400
transcript_60441.known	chr17	+	1876	14	FSM	ENSG00000011260.14	ENST00000225298.12	1876	14	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_2	65.1874856396814	959	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTATCTGGTTCTTCC	-8	True	NA	NA	False	AATAAA	-25	NA	51260545	51297933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51260927_51263273_51263387_51266181_51266281_51268836_51268905_51273361_51273451_51275865_51275992_51277129_51277305_51280004_51280106_51280388_51280480_51285244_51285369_51288028_51288204_51293902_51294046_51296964_51297004_51297781
transcript_60455.nnic	chr17	+	715	2	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTATTGTGTTTGTGTGGT	NA	False	NA	NA	False	TTTAAA	-39	NA	53061745	53237759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr17_+_53062044_53237342
transcript_60461.nnic	chr17	-	939	3	NNC	ENSG00000285939.2	novel	1168	3	NA	NA	-15787	29692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGTGAGAATTTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	54082612	54036256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_54036891_54066576_54066823_54082553
transcript_60462.nnic	chr17	-	529	3	NNC	ENSG00000285939.2	novel	1168	3	NA	NA	-15787	29282	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATCCAGTTTATGGTAA	NA	False	NA	NA	False	AATAAA	-15	NA	54082612	54036666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_54036891_54066576_54066823_54082553
transcript_60466.known	chr17	+	2168	16	FSM	ENSG00000141198.16	ENST00000575882.6	2168	16	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_15	88.9094420682578	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTTTTTTTTTTA	8	True	NA	8	True	AATAAA	-16	NA	54900851	54961956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_60467.known	chr17	+	2228	16	FSM	ENSG00000141198.16	ENST00000445275.6	2228	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	129.634289016791	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTAATACTTTTT	0	True	NA	1	True	AATAAA	-9	NA	54900751	54961949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949550_54949624_54950044_54950127_54960565_54960628_54961234
transcript_60468.known	chr17	+	1521	16	FSM	ENSG00000141198.16	ENST00000572158.5	1521	16	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	130.499791400429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGACAATACCTACCAAC	-8	True	NA	NA	False	NA	NA	NA	54900835	54961314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912686_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_60472.known	chr17	+	1895	15	FSM	ENSG00000141198.16	ENST00000348161.8	1895	15	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	130.160203485661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAATTATAAATTGTTA	3	True	NA	-24	True	ACTAAA	-44	NA	54900805	54961722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_60475.known	chr17	+	1522	14	FSM	ENSG00000141198.16	ENST00000536554.5	1522	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	132.203313030844	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTACTTAGTCCT	9	True	NA	NA	False	NA	NA	NA	54900852	54961475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_6048.nnic	chr1	-	1268	3	FSM	ENSG00000230798.6	ENST00000686970.1	492	3	-782	6	6	0	multi-exon	FALSE	canonical	0	0	junction_1	516.5	6417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	6	True	NA	-53	True	AATAAA	-24	NA	63322447	63320883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63321583
transcript_60484.known	chr17	+	1849	10	FSM	ENSG00000141198.16	ENST00000575333.5	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	38.7011340632	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTTCTTAGAACT	13	True	NA	14	True	AGTAAA	-20	NA	54900856	54938033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
transcript_6052.known	chr1	-	496	3	FSM	ENSG00000230798.6	ENST00000431294.6	678	3	176	6	176	0	multi-exon	FALSE	canonical	0	0	junction_1	21.5	6925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	166	False	NA	-53	True	AATAAA	-24	NA	63323582	63320883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63323490
transcript_60527.known	chr17	-	1054	5	FSM	ENSG00000166260.13	ENST00000572558.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	220.06930726478	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAACCTGTGTCCTTGT	-2	True	NA	-11	True	AATAAA	-11	NA	54968654	54951908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54952113_54961118_54961313_54963305_54963432_54964696_54964853_54968280
transcript_60528.known	chr17	-	453	3	FSM	ENSG00000166260.13	ENST00000573912.1	453	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGTGTCCTTGTGGA	7437	False	NA	-8	True	AATAAA	-14	NA	54961265	54951905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54952113_54953660_54953760_54961118
transcript_60529.known	chr17	-	652	2	FSM	ENSG00000166260.13	ENST00000576084.5	652	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGTGTCCTTGTGGA	4623	False	NA	-8	True	AATAAA	-14	NA	54954105	54951905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54952113_54953660
transcript_60530.known	chr17	-	3150	4	FSM	ENSG00000166260.13	ENST00000299335.8	3150	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	18.8325958557674	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTCTAGTTTATTT	-2	True	NA	NA	False	AGTAAA	-20	NA	54968654	54960421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54962916_54963305_54963432_54964696_54964853_54968280
transcript_60531.known	chr17	-	1108	3	FSM	ENSG00000166260.13	ENST00000571584.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	5	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAGGCTTAATCCC	-1	True	NA	11	True	ATTAAA	-33	NA	54968703	54962902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54963432_54964696_54964853_54968280
transcript_60533.known	chr17	+	15590	18	FSM	ENSG00000166263.13	ENST00000376352.6	15590	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	14.9978083750715	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATTGGTTTTTGTGTGAA	-1	True	NA	9	True	AATAAA	-18	NA	54968764	55173632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55047088_55047155_55072899_55073077_55078077_55078195_55078685_55078736_55081049_55081184_55141309_55141368_55159796
transcript_60539.nic	chr17	+	1854	16	ISM	ENSG00000166263.13	ENST00000376352.6	15590	18	-19	92310	19	36546	5prime_fragment	FALSE	canonical	3	24	junction_11	15.2717604311575	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGAGGAGAATATTTCC	-20	True	NA	NA	False	AATAAA	-18	NA	54968745	55081322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55047088_55047155_55072899_55073077_55078077_55078195_55078685_55078736_55081049
transcript_60543.nic	chr17	+	1221	11	ISM	ENSG00000166263.13	ENST00000434978.6	2807	17	-30	117551	19	0	5prime_fragment	FALSE	canonical	3	34	junction_9	15.4194682139171	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAATCCTATATTGGA	-20	True	NA	NA	False	AAAAAG	-6	NA	54968745	55043375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235
transcript_60548.known	chr17	+	1174	5	FSM	ENSG00000166263.13	ENST00000464340.5	1174	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	31.4672448746311	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATATAGCATGAGAAAGG	26	True	NA	NA	False	AATAAA	-19	NA	54968791	54991852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54991038
transcript_6055.known	chr1	-	491	3	FSM	ENSG00000230798.6	ENST00000427268.1	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.5	6723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	NA	False	NA	-53	True	AATAAA	-24	NA	63324441	63320883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63324354
transcript_60551.known	chr17	+	456	4	FSM	ENSG00000166263.13	ENST00000461444.5	456	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.3648246606609	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAAAAGACCCACCAG	5	True	NA	NA	False	NA	NA	NA	54968726	54990988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824
transcript_60555.nic	chr17	+	259	3	ISM	ENSG00000166263.13	ENST00000461444.5	456	4	16	4739	16	-4739	5prime_fragment	FALSE	canonical	3	76	junction_1	2	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGTCTACTTGAAAAGTA	-23	True	NA	9	True	AATAAA	-22	NA	54968742	54986249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_54968816_54985613_54985692_54986141
transcript_60556.nic	chr17	+	361	3	ISM	ENSG00000166263.13	ENST00000461444.5	456	4	19	4634	19	-4634	5prime_fragment	FALSE	canonical	3	76	junction_1	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTAATGTGGTCTAGG	-20	True	NA	114	True	ATTAAA	-17	NA	54968745	54986354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_54968816_54985613_54985692_54986141
transcript_60557.known	chr17	-	2569	7	FSM	ENSG00000108960.9	ENST00000262065.8	2569	7	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_6	24.0346971411471	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-3	True	NA	-20	True	AATAAA	-14	NA	55421835	55392621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
transcript_60558.known	chr17	-	570	2	FSM	ENSG00000108960.9	ENST00000577038.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACCCTGTTCAATT	-3	True	NA	NA	False	AAAAAG	-9	NA	55421797	55420091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_55420534_55421669
transcript_60559.nnic	chr17	-	1707	3	NNC	ENSG00000166292.12	novel	1755	2	NA	NA	-2550	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGTTAATTATTTGCT	6541	False	NA	NA	False	ATTAAA	-23	NA	55725574	55719626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_55721136_55722618_55722730_55725487
transcript_60560.nnic	chr17	-	1416	3	NNC	ENSG00000166292.12	novel	1962	4	NA	NA	-2550	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTCTTAAATGGTTGT	6541	False	NA	NA	False	AATAAA	-15	NA	55725574	55719917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_55721136_55722618_55722730_55725487
transcript_60565.known	chr17	+	2680	6	FSM	ENSG00000141179.14	ENST00000576183.5	2680	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	66.5540381945378	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTTGTCCTGTGTAC	16	True	NA	18	True	AATAAA	-11	NA	55751060	55777368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55775310
transcript_60567.known	chr17	+	1972	6	FSM	ENSG00000141179.14	ENST00000268896.10	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	24.5226425982193	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	6	True	NA	24	True	AATAAA	-17	NA	55751050	55777374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_60569.known	chr17	+	919	6	FSM	ENSG00000141179.14	ENST00000573500.5	919	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	69.3195499119837	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGAGCTCGCATTCTA	1	True	NA	NA	False	AATAAA	-20	NA	55751093	55823090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55822760
transcript_60574.known	chr17	+	1856	6	FSM	ENSG00000141179.14	ENST00000325214.10	1856	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	64.8919101275344	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	13	False	NA	24	True	AATAAA	-17	NA	55751399	55777374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751478_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_60576.known	chr17	+	2234	6	FSM	ENSG00000141179.14	ENST00000417982.6	2234	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	79.7932327957704	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCCTGTGTACCACTT	12	True	NA	23	True	AATAAA	-16	NA	55751104	55777373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751478_55767334_55767453_55771105_55771202_55773655_55773896_55774791_55774860_55776034
transcript_60577.known	chr17	-	5745	9	FSM	ENSG00000121060.19	ENST00000316881.9	5745	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	8.61684396980704	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGAGTTCTGTGATTTT	14	True	NA	-6	True	AATAAA	-17	NA	56914049	56887908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_56892230_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
transcript_60579.nic	chr17	+	1744	4	ISM	ENSG00000153933.10	ENST00000576869.5	1105	6	-18	1015	6	341	5prime_fragment	FALSE	canonical	3	15	junction_2	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAATTTTAAAGAC	-31	True	NA	NA	False	AATATA	-37	NA	56834112	56846643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_56834261_56834777_56835260_56844018_56844179_56845689
transcript_60580.known	chr17	-	689	2	FSM	ENSG00000214226.9	ENST00000570754.5	689	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGTGGTCTCTTCCTT	3729	False	NA	NA	False	AATAAA	-18	NA	56795292	56791912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_56792353_56795043
transcript_60581.known	chr17	+	1843	2	FSM	ENSG00000153933.10	ENST00000572810.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTTCTATTTCC	-37	True	NA	NA	False	AATAAA	-13	NA	56834106	56836466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_56834261_56834777
transcript_60582.known	chr17	+	348	1	FSM	ENSG00000274213.1	ENST00000619432.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTTTTTTCTTCTTCTT	12	False	NA	10	True	AATAAA	-20	NA	56914185	56914533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_56914200_56914500
transcript_60583.known	chr17	-	2634	7	FSM	ENSG00000121058.5	ENST00000240316.5	2634	7	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	28.3705637746043	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTACCGAGTTATCAT	-13	True	NA	-15	True	AATAAA	-17	NA	56961050	56938198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_56939155_56942034_56942124_56946441_56946512_56949386_56949435_56949680_56949768_56949888_56950997_56960774
transcript_60585.nic	chr17	-	662	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-68	12480	-68	234	5prime_fragment	FALSE	canonical	3	335	junction_1	0	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAATGTGAATATAAAA	NA	False	NA	NA	False	AAGAAA	-16	NA	56961118	56950678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_56950997_56960774
transcript_60586.nic	chr17	-	603	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-68	12539	-68	175	5prime_fragment	FALSE	canonical	3	335	junction_1	0	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGGCACAGTGGGTGA	NA	False	NA	NA	False	AATAAA	-4	NA	56961118	56950737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_56950997_56960774
transcript_60587.known	chr17	+	410	2	FSM	ENSG00000262623.1	ENST00000570407.1	410	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATGTAATACGTATTTACA	NA	False	NA	NA	False	AAGAAA	-23	NA	56951663	56952404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_56951780_56952110
transcript_60590.known	chr17	+	1915	13	FSM	ENSG00000121064.13	ENST00000576154.5	1915	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	111.800510583211	1764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGGAGCATTCTACT	11	True	NA	23	True	AATAAA	-23	NA	56978147	57006768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_56978236_56981081_56981231_56985377_56985468_56987694_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506_56995636_56996961_56997056_56998373_56998499_57000854_57000993_57002017_57002182_57006172
transcript_60602.nnic	chr17	-	965	3	NNC	ENSG00000263004.3	novel	740	3	NA	NA	3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGTTTGCAGTATT	-2	True	NA	-7	True	AATAAA	-16	NA	57085038	57078297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_57078704_57079286_57079411_57084603
transcript_60603.known	chr17	-	713	3	FSM	ENSG00000263004.3	ENST00000576871.2	740	3	19	8	2	-2	multi-exon	FALSE	canonical	3	12	junction_1	1.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGTTTGCAGTATT	14	False	NA	-7	True	AATAAA	-16	NA	57085022	57078297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57078704_57079286_57079411_57084839
transcript_60606.known	chr17	-	449	2	FSM	ENSG00000263004.3	ENST00000576313.2	1300	2	0	851	0	-851	multi-exon	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTACTCCAGTGTGACTG	12	False	NA	NA	False	NA	NA	NA	57085024	57079146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57079411_57084839
transcript_60607.known	chr17	+	6379	14	FSM	ENSG00000153944.12	ENST00000284073.7	6379	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	3.59157462459346	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGTGTTCTTTCAC	-24	True	NA	20	True	AATAAA	-25	NA	57256522	57684689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57652098_57652162_57674971_57675127_57676986_57677060_57679548
transcript_60609.known	chr17	+	6301	14	FSM	ENSG00000153944.12	ENST00000674964.1	6301	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	5.02066734525561	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTTGGTGTTCTTTCAC	-4	True	NA	20	True	AATAAA	-25	NA	57256542	57684689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57652098_57652162_57674971_57675127_57676986_57677060_57679606
transcript_60614.nic	chr17	+	1401	9	ISM	ENSG00000153944.12	ENST00000675656.1	2247	15	-241	64107	-2	0	5prime_fragment	FALSE	canonical	2	6	junction_1	3.53553390593274	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAGATGA	-6	True	NA	NA	False	TTTAAA	-38	NA	57256540	57616631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969
transcript_60617.known	chr17	+	534	6	FSM	ENSG00000153944.12	ENST00000581523.5	534	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.67802782663136	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTATGGGTGTGTGA	4	True	NA	16	True	AATAAA	-28	NA	57256742	57274489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57274267
transcript_60620.known	chr17	+	472	5	FSM	ENSG00000153944.12	ENST00000579531.5	472	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.52268050859363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGATTATGGGACTTAA	14	True	NA	-40	True	NA	NA	NA	57257041	57274433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57274267
transcript_60622.known	chr17	+	2247	15	FSM	ENSG00000153944.12	ENST00000675656.1	2247	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.77688921302736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTTTGGCTTGGGTG	43	False	NA	NA	False	TTTAAA	-11	NA	57256781	57680738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57650649_57650674_57652098_57652162_57674917_57675127_57676986_57677060_57679548
transcript_60631.known	chr17	-	5609	5	FSM	ENSG00000181610.13	ENST00000313608.13	5609	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_4	16.4981059518964	5394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCAGATTTCTTTTT	1	True	NA	-5	True	AATAAA	-22	NA	57850044	57834780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
transcript_60636.known	chr17	-	4630	6	FSM	ENSG00000136451.9	ENST00000581208.2	4630	6	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_3	18.2756668824971	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATGGATTGTTTAA	-32	True	NA	-6	True	ATTAAA	-17	NA	57988254	57971551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
transcript_6064.known	chr1	-	470	2	FSM	ENSG00000230798.6	ENST00000686639.1	1414	2	939	5	106	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	2219	False	NA	-53	True	AATAAA	-24	NA	63321529	63320883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366
transcript_6065.known	chr1	-	547	3	FSM	ENSG00000230798.6	ENST00000690549.1	571	3	18	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	175	7245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-5	True	NA	-53	True	AATAAA	-24	NA	63322458	63320883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63322315
transcript_60656.known	chr17	+	1514	1	FSM	ENSG00000279069.1	ENST00000624641.1	1514	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTGAAAATACCGGTCC	3	True	NA	NA	False	NA	NA	NA	58006673	58008187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58006700_58008200
transcript_60657.known	chr17	-	5343	4	FSM	ENSG00000136450.13	ENST00000258962.5	5343	4	0	0	0	0	multi-exon	FALSE	canonical	3	1661	junction_1	257.827246211274	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCCTTCATTTTGCAC	4	True	NA	-17	True	ATTAAA	-19	NA	58007246	58000918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006943
transcript_60658.known	chr17	-	3117	3	FSM	ENSG00000136450.13	ENST00000582730.6	3117	3	0	0	0	0	multi-exon	FALSE	canonical	3	1909	junction_2	189.5	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGGTATTAGCCATCT	-11	True	NA	-35	True	ATTAAA	-17	NA	58007261	58003359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58005974_58006342_58006528_58006943
transcript_60659.known	chr17	-	438	2	FSM	ENSG00000136450.13	ENST00000581497.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	2490	False	NA	-2	True	AATAAA	-18	NA	58005134	58003492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58003719_58004922
transcript_6066.known	chr1	-	941	4	FSM	ENSG00000230798.6	ENST00000418244.6	1006	4	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	272.422466033916	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	17	True	NA	-53	True	AATAAA	-24	NA	63322436	63320883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63321664_63322081_63322315
transcript_60660.known	chr17	-	1465	4	FSM	ENSG00000136450.13	ENST00000583741.1	1465	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	964.434549360401	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATATACATTTTCCTT	-11	True	NA	NA	False	ACTAAA	-17	NA	58007261	58004848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006906
transcript_60663.nnic	chr17	+	2304	3	NNC	ENSG00000264364.3	novel	6807	3	NA	NA	-504	-4319	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	25.5	1968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGCACTGTTTGGGTCT	NA	False	NA	35	True	ATTAAA	-15	NA	58082914	58091223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_58082996_58087081_58087223_58089141
transcript_60667.known	chr17	-	2343	18	FSM	ENSG00000011143.19	ENST00000393119.7	2343	18	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_4	20.1858150201492	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60668.known	chr17	-	2403	18	FSM	ENSG00000011143.19	ENST00000675753.2	2403	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	35.6368651703478	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214899_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60669.known	chr17	-	2214	17	FSM	ENSG00000011143.19	ENST00000676787.1	2214	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	38.6732607074966	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60670.known	chr17	-	2260	17	FSM	ENSG00000011143.19	ENST00000678463.1	2260	17	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	38.2522466660456	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60673.known	chr17	-	2126	16	FSM	ENSG00000011143.19	ENST00000313863.11	2126	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	37.9101862593976	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-14	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58206171_58206282_58206381_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60675.known	chr17	-	1467	15	FSM	ENSG00000011143.19	ENST00000580127.6	1467	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.1251231799241	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCATTGTGCCATAC	-14	True	NA	-9	True	AATAAA	-21	NA	58219255	58207560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58207730_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60677.known	chr17	-	1626	14	FSM	ENSG00000011143.19	ENST00000585134.2	1626	14	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_10	15.1294219415027	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCCAGGCATTGTGC	-14	True	NA	-14	True	AATAAA	-16	NA	58219255	58207565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60681.known	chr17	-	1289	12	FSM	ENSG00000011143.19	ENST00000581761.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	43.3280776639074	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTTTTTCTGAATG	-14	True	NA	NA	False	AATAAA	-29	NA	58219255	58208653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58208894_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60686.known	chr17	-	2810	8	FSM	ENSG00000011143.19	ENST00000677076.1	2810	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.7365890071378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATCCCTACAAAAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	58219255	58211756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58216244_58216665_58216737_58218619_58218730_58219150
transcript_6069.known	chr1	+	2055	15	FSM	ENSG00000088035.18	ENST00000603108.6	2055	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	96.9865338853907	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATATGGAGACCAAAG	NA	False	NA	-12	True	NA	NA	NA	63367580	63437182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415817_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_60694.known	chr17	-	1040	4	FSM	ENSG00000011143.19	ENST00000581180.2	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTGCTTTCATTATTAG	11	True	NA	NA	False	AATAAA	-15	NA	58219230	58215464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58216244_58216665_58216737_58218619_58218730_58219150
transcript_60698.known	chr17	-	1401	4	FSM	ENSG00000213246.7	ENST00000581166.5	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	230.912681909562	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCCATTTTTCAATAC	14	True	NA	-1	True	TATAAA	-24	NA	58352167	58345174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58346314_58347187_58347242_58351401_58351509_58352066
transcript_60699.known	chr17	-	539	3	FSM	ENSG00000213246.7	ENST00000581204.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_2	5	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGCCTTGCCTCCCTC	5467	False	NA	-8	True	AATAAA	-32	NA	58347611	58345911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58346314_58347187_58347242_58347528
transcript_6070.known	chr1	+	3325	15	FSM	ENSG00000088035.18	ENST00000263440.6	3325	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	83.0092507753546	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTGATTCAAGGTATC	-17	True	NA	NA	False	AATAAA	-32	NA	63367626	63438553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_60701.nic	chr17	-	2413	5	ISM	ENSG00000108389.10	ENST00000582663.5	572	7	-32	1248	18	-1094	5prime_fragment	FALSE	canonical	3	29	junction_4	39.2077798402307	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATATATATATATTCCAA	-21	True	NA	NA	False	NA	NA	NA	58517887	58509415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_58511512_58512389_58512507_58512851_58512942_58516579_58516619_58517816
transcript_60706.nic	chr17	-	960	6	ISM	ENSG00000121101.16	ENST00000240361.12	4911	33	126040	0	-1725	0	3prime_fragment	FALSE	canonical	3	20	junction_2	3.65513337649941	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGCTGTGTAAGATAT	NA	False	NA	-1	True	AATAAA	-20	NA	58565983	58556679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_58557048_58557798_58557851_58559452_58559563_58561519_58561613_58564868_58564969_58565746
transcript_60707.nic	chr17	-	829	5	NIC	ENSG00000121101.16	novel	4834	32	NA	NA	-1646	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.8822346383161	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGCTGTGTAAGATAT	NA	False	NA	-1	True	AATAAA	-20	NA	58565904	58556679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_58557048_58559452_58559563_58561519_58561613_58564868_58564969_58565746
transcript_60721.known	chr17	+	2562	9	FSM	ENSG00000108384.15	ENST00000337432.9	2562	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	7.36439916082772	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTTTCAAAATCACCTA	0	True	NA	NA	False	AATAAA	-19	NA	58692601	58735611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_60724.nic	chr17	+	1161	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	22.3239641417021	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	-35	True	NA	10	True	AATAAA	-21	NA	58692566	58734331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_58692633_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_60726.nic	chr17	+	1208	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	22.9506944339382	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	-29	True	NA	10	True	AATAAA	-21	NA	58692572	58734331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_58692686_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_60729.nic	chr17	+	1257	8	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	25.8756839602002	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	-36	True	NA	10	True	AATAAA	-21	NA	58692565	58734331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58732483_58732545_58734117
transcript_60730.known	chr17	+	1098	8	FSM	ENSG00000108384.15	ENST00000482007.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	25.7317401078822	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCAGATCATATGAAG	13	True	NA	6	True	AATAAA	-17	NA	58692614	58734327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58692789_58694930_58695190_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_6074.known	chr1	+	1841	15	FSM	ENSG00000088035.18	ENST00000647818.1	1841	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	83.0092507753546	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGGAACCACAGGAAAG	NA	False	NA	-68	True	TATAAA	-20	NA	63367574	63437126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411254_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_60751.known	chr17	+	567	2	FSM	ENSG00000108384.15	ENST00000421782.3	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTACTTCATTATCC	26	True	NA	7	True	ATTAAA	-18	NA	58692627	58695336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58692789_58694930
transcript_60755.known	chr17	+	1609	2	FSM	ENSG00000108384.15	ENST00000486827.1	1609	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTGTTACTTCATTA	4	True	NA	4	True	ATTAAA	-15	NA	58692605	58695333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58693812_58694930
transcript_60756.known	chr17	+	474	4	FSM	ENSG00000108384.15	ENST00000584804.1	474	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	32.4995726467629	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	5897	False	NA	10	True	AATAAA	-21	NA	58709858	58734331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58709991_58720745_58720813_58732483_58732545_58734117
transcript_60757.known	chr17	+	6560	7	FSM	ENSG00000175175.6	ENST00000308249.4	6560	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	4.01732359773132	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCATTTGTCTTTTTAT	-2	True	NA	20	True	AATAAA	-21	NA	58755853	58985179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58756462_58955648_58955768_58965693_58965894_58969538_58969728_58972131_58972276_58972831_58972926_58979973
transcript_60758.known	chr17	-	3622	25	FSM	ENSG00000108395.14	ENST00000393066.7	3622	25	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_1	64.1995045844506	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATTGCTAAAGTGAAGC	NA	False	NA	-17	True	AATAAA	-20	NA	59106921	58982650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58982922_58999380_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_60761.known	chr17	-	4489	24	FSM	ENSG00000108395.14	ENST00000262294.12	4489	24	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_22	33.8930264224901	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	24	False	59106904	-5	True	AATAAA	-16	NA	59106880	58998201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_60763.known	chr17	-	3548	23	FSM	ENSG00000108395.14	ENST00000393065.6	3548	23	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_22	66.0128493627698	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTGTTTAAATAATC	26	True	NA	NA	False	NA	NA	NA	59106826	58998986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59106440
transcript_60770.known	chr17	-	353	4	FSM	ENSG00000108395.14	ENST00000584889.3	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	36.3532055746884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTAGTTGCCTTTTAG	436	False	NA	NA	False	NA	NA	NA	59106468	59088225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59088408_59091299_59091341_59104292_59104395_59106440
transcript_60772.nnic	chr17	-	1637	3	NNC	ENSG00000108395.14	novel	3622	25	NA	NA	-22	-9343	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	166	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAATAAACATAA	-13	True	NA	NA	False	ATTAAA	-8	NA	59106762	59099395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_59100609_59104292_59104395_59106440
transcript_60775.known	chr17	-	4310	24	FSM	ENSG00000108395.14	ENST00000577554.5	4310	24	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_20	108.171291733932	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTGCTGTTTATTAAA	9	True	NA	-3	True	AATAAA	-18	NA	59106740	58998199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58999460_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59090016_59090093_59091299_59091341_59104292_59104395_59106440
transcript_60781.known	chr17	+	1338	2	FSM	ENSG00000224738.2	ENST00000451775.2	1524	2	0	186	0	-186	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAATCCTCT	153	False	NA	NA	False	NA	NA	NA	59106597	59118267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59107592_59117923
transcript_60785.known	chr17	-	689	2	FSM	ENSG00000182628.13	ENST00000580541.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTGTAAATTAAAGTAT	9	True	NA	-3	True	CATAAA	-36	NA	59155184	59111885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59154955
transcript_60791.known	chr17	-	2809	4	FSM	ENSG00000182628.13	ENST00000330137.12	2809	4	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_2	73.769912566032	2782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGTGTCTTTATGTCTT	7	True	NA	1	True	NA	NA	NA	59155186	59109856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59155130
transcript_60792.known	chr17	-	689	3	FSM	ENSG00000182628.13	ENST00000578105.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	214.5	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTTGTAAATTAAAGT	9	True	NA	-5	True	CATAAA	-34	NA	59155184	59111887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119318_59119496_59155130
transcript_60793.known	chr17	-	533	2	FSM	ENSG00000182628.13	ENST00000583927.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	516	False	NA	-60	True	NA	NA	NA	59155260	59111942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59155130
transcript_60794.known	chr17	-	595	3	FSM	ENSG00000182628.13	ENST00000581068.5	595	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	174	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGATAATATAGATGTT	-4	True	NA	61	True	NA	NA	NA	59155248	59111955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59131280_59131368_59155130
transcript_60795.known	chr17	-	625	3	FSM	ENSG00000182628.13	ENST00000437036.6	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	96.5	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTACACACGCATGCAC	-1	True	NA	-30	True	AATAAA	-42	NA	59155194	59112046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59131280_59131368_59154955
transcript_60796.known	chr17	-	583	4	FSM	ENSG00000182628.13	ENST00000583380.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	221.64887146616	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCAGCCAAAAGGATC	19	True	NA	-74	True	AATATA	-6	NA	59155174	59112090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119298_59119496_59131280_59131368_59155130
transcript_60797.known	chr17	-	570	4	FSM	ENSG00000182628.13	ENST00000583976.1	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	186.483839037656	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAATTCTAACAGAGAA	16	True	NA	NA	False	AAGAAA	-11	NA	59155177	59112261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59154955
transcript_60798.known	chr17	-	894	5	FSM	ENSG00000182628.13	ENST00000578519.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	258.258954346214	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGCTTTGTAAATTAAA	11	True	NA	-7	True	CATAAA	-32	NA	59155182	59111889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119318_59119496_59124306_59124429_59131280_59131368_59155130
transcript_60812.known	chr17	+	6226	10	FSM	ENSG00000068489.13	ENST00000262293.9	6226	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	8.12099853983182	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTTTTTAAACTAGAAA	-10	True	NA	NA	False	AATAAA	-34	NA	59155745	59206709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562
transcript_60822.nnic	chr17	+	961	4	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-304	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	28.4526897771644	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAATGGGTAGTGA	84	False	NA	NA	False	NA	NA	NA	59155427	59203847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59155806_59169747_59169881_59185053_59185092_59203435
transcript_60826.known	chr17	+	3221	4	FSM	ENSG00000167447.13	ENST00000300917.10	3221	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	22.7596133534821	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAATACATGGATGATA	5	True	NA	1	True	AATAAA	-23	NA	59210034	59215230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59211811_59212340_59212487_59212728_59213602_59214804
transcript_6083.known	chr1	+	1887	14	FSM	ENSG00000088035.18	ENST00000648964.1	1887	14	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	99.3625838881169	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAATGTATATGGAGA	NA	False	NA	-18	True	NA	NA	NA	63367602	63437176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63367688_63370770_63371060_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_60832.nnic	chr17	+	887	3	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-304	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAATGGGTAGTGACG	84	False	NA	NA	False	NA	NA	NA	59155427	59203849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59155806_59169747_59169843_59203435
transcript_60834.nnic	chr17	+	1776	3	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-304	33	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	34.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTATGGCCCAGTGCAG	84	False	NA	NA	False	AAAAAG	-19	NA	59155427	59204738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59155806_59169747_59169843_59203435
transcript_60843.known	chr17	+	199	3	FSM	ENSG00000068489.13	ENST00000577457.1	199	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCTCACTTTCAGTCC	-11	True	NA	32	True	AAAAAG	-1	NA	59155744	59169819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59155806_59163598_59163665_59169747
transcript_60846.known	chr17	+	2334	11	FSM	ENSG00000068489.13	ENST00000578542.5	2334	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	18.8162164103201	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	-10	True	NA	NA	False	NA	NA	NA	59155745	59204705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201758_59203645
transcript_60853.known	chr17	+	3241	10	FSM	ENSG00000153982.11	ENST00000284116.9	3241	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.57994645755099	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTCTTCATTCTTT	7	True	NA	NA	False	AATAAA	-17	NA	59220510	59275970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59257750_59257841_59267040_59267175_59270935_59270996_59272784_59272837_59273650
transcript_60857.known	chr17	+	1055	9	FSM	ENSG00000153982.11	ENST00000581276.5	1055	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.7662812973354	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGATTCCTCTTATGTAC	58	False	NA	NA	False	AATAAA	-18	NA	59220561	59273021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59257750_59257841_59267040_59267175_59270935_59270996_59272784
transcript_60861.nnic	chr17	+	1474	6	NIC	ENSG00000153982.11	novel	3241	10	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	7.65767588763066	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTCTTCATTCTTT	-31	True	NA	NA	False	AATAAA	-17	NA	59220472	59275970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59275119
transcript_60863.nic	chr17	+	991	5	ISM	ENSG00000153982.11	ENST00000581276.5	1055	9	-89	15413	6	8380	5prime_fragment	FALSE	canonical	1	1	junction_4	7.08431365765238	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAAATTTACATATTG	-31	True	NA	NA	False	AATAAA	-44	NA	59220472	59257608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121
transcript_60865.known	chr17	+	738	4	FSM	ENSG00000153982.11	ENST00000583543.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	4.96655480858378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATACAAAAAATATTA	4	True	NA	NA	False	NA	NA	NA	59220681	59249228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739
transcript_6087.known	chr1	-	1285	10	FSM	ENSG00000142856.17	ENST00000489099.5	1285	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	153.269390854272	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	NA	False	NA	-13	True	AATAAA	-16	NA	63523502	63440772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_60872.known	chr17	+	3575	18	FSM	ENSG00000108406.10	ENST00000251241.9	3575	18	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	19.3458774879442	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATAATGTGTGTTTT	-12	True	NA	15	True	AATAAA	-27	NA	59565609	59608345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59565784_59566626_59566795_59570517_59570664_59573115_59573236_59573739_59573968_59574187_59574255_59575339_59575472_59577265_59577366_59579471_59579559_59579696_59579880_59586152_59586234_59587895_59588054_59598736_59598852_59599374_59599484_59602521_59602617_59605114_59605185_59605445_59605675_59607032
transcript_60877.nic	chr17	+	3521	17	NIC	ENSG00000108406.10	novel	3575	18	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_10	32.3979165996828	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATAATGTGTGTTTT	NA	False	NA	15	True	AATAAA	-27	NA	59565582	59608345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_59565784_59566626_59566795_59570517_59570664_59573115_59573236_59573739_59573968_59574187_59574255_59575339_59575472_59577265_59577366_59579471_59579559_59579696_59579880_59587895_59588054_59598736_59598852_59599374_59599484_59602521_59602617_59605114_59605185_59605445_59605675_59607032
transcript_60880.known	chr17	+	814	5	FSM	ENSG00000108406.10	ENST00000580218.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	52.3282906275372	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCAGTATCAAGTTAAAA	NA	False	NA	NA	False	AATGAA	-37	NA	59565557	59574259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59565784_59566626_59566795_59573115_59573236_59573739_59573968_59574187
transcript_60882.nic	chr17	+	1357	2	ISM	ENSG00000108406.10	ENST00000577596.5	539	5	-28	5974	25	-5974	5prime_fragment	FALSE	canonical	3	133	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGCCGGGCGTGGTGGTGG	NA	False	NA	NA	False	AATAGA	-12	NA	59565582	59567782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_59565784_59566626
transcript_60886.known	chr17	+	8369	32	FSM	ENSG00000141367.12	ENST00000269122.8	8369	32	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_7	157.724281616517	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACCTGGAGACAAAATTT	-19	True	NA	NA	False	TATAAA	-3	NA	59619894	59696956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635_59690712_59693727
transcript_6089.known	chr1	-	1044	10	FSM	ENSG00000142856.17	ENST00000371092.7	1044	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	195.309314665383	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	12	True	NA	-13	True	AATAAA	-16	NA	63523194	63440772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
transcript_60893.known	chr17	-	2246	3	FSM	ENSG00000141378.15	ENST00000409433.2	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	4.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	NA	False	NA	-17	True	AATAAA	-17	NA	59707626	59697307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59697979_59698870_59700190_59707370
transcript_60894.known	chr17	-	1162	1	FSM	ENSG00000273702.1	ENST00000611877.1	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGCCTTTTATCTTT	206	False	NA	NA	False	AATAAA	-16	NA	59619714	59618552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59618600_59619700
transcript_60895.known	chr17	+	5292	31	FSM	ENSG00000141367.12	ENST00000393043.5	5292	31	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_7	148.569983509456	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTACTGTCTGA	-7	True	NA	NA	False	AATACA	-36	NA	59619857	59690826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635
transcript_60896.known	chr17	-	731	2	FSM	ENSG00000141378.15	ENST00000393038.3	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	0	4553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	3	True	NA	-17	True	AATAAA	-17	NA	59707430	59697307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59697979_59707370
transcript_60897.known	chr17	+	575	3	FSM	ENSG00000141367.12	ENST00000580081.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	624	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCTTGTTACGGATAAT	10	True	NA	NA	False	NA	NA	NA	59619923	59647502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59620174_59644275_59644496_59647397
transcript_60898.known	chr17	-	409	3	FSM	ENSG00000141378.15	ENST00000587935.1	409	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTATCGCTTT	18	True	NA	NA	False	ATTAAA	-23	NA	59707415	59674635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59674822_59679366_59679545_59707370
transcript_60901.nic	chr17	-	2153	7	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	35.1777233803187	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	NA	False	NA	-13	True	AATAAA	-27	NA	59892981	59859478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59878102_59878335_59880893_59881111_59886082_59886231_59892696
transcript_60905.known	chr17	-	1027	6	FSM	ENSG00000108423.15	ENST00000539018.5	1027	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	32.1409396253439	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATGGGAAAAGTATACC	20	True	NA	NA	False	NA	NA	NA	59892893	59860316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59892696
transcript_60912.nic	chr17	-	1704	5	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	43.1914343359884	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	NA	False	NA	-13	True	AATAAA	-27	NA	59892981	59859478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59886082_59886231_59892696
transcript_60920.known	chr17	-	1769	8	FSM	ENSG00000108423.15	ENST00000340993.10	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	26.4706229158103	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAAAGTTCCATTCT	-7	True	NA	NA	False	NA	NA	NA	59892920	59860012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_60921.known	chr17	-	2491	9	FSM	ENSG00000108423.15	ENST00000325752.8	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	16.684105459988	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-30	True	NA	-13	True	AATAAA	-27	NA	59892943	59859478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_60922.known	chr17	-	2184	7	FSM	ENSG00000108423.15	ENST00000613721.4	2184	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	34.1158158174312	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGTAAATGTGTACTT	-32	True	NA	-16	True	AATAAA	-45	NA	59892945	59859481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59863663_59863848_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_60923.known	chr17	-	1680	8	FSM	ENSG00000108423.15	ENST00000394239.7	1680	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.1587635755872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	55	False	NA	NA	False	NA	NA	NA	59892858	59860033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59866595_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_60927.known	chr17	+	5428	15	FSM	ENSG00000108443.14	ENST00000225577.9	5428	15	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_10	11.6726175299288	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTGCTGAGAAACTG	-6	True	NA	NA	False	AATAAA	-27	NA	59893120	59950574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59914634_59914704_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_60933.known	chr17	+	1913	14	FSM	ENSG00000108443.14	ENST00000443572.6	1913	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	41.0372900128363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTATCCTTTCATTAGG	3	True	NA	NA	False	NA	NA	NA	59893129	59947137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_60935.known	chr17	+	692	3	FSM	ENSG00000267302.5	ENST00000593015.5	692	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGATCACTTGGTGC	343	False	NA	NA	False	AATAAA	-23	NA	59964831	59973104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59965189_59966402_59966468_59972834
transcript_60936.known	chr17	+	2808	15	FSM	ENSG00000108443.14	ENST00000472940.5	2808	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	63.644099715303	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGTGGCTCGTTTG	8087	False	NA	10	True	AATAAA	-22	NA	59893085	59947461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59914634_59914704_59926415_59926583_59930116_59930175_59930799_59931053_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936542_59940835_59940944_59945405_59945519_59946550
transcript_60937.known	chr17	-	2122	9	FSM	ENSG00000189050.16	ENST00000305783.13	2122	9	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_5	16.431676725155	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	4	True	NA	NA	False	ATTAAA	-22	NA	59964740	59952239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59960067_59960169_59962539_59962617_59962826_59963285_59964607
transcript_60938.known	chr17	-	1893	8	FSM	ENSG00000189050.16	ENST00000482446.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	20.2121402193063	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTCTGGACGTCATA	10	True	NA	1	True	AATAAA	-14	NA	59964734	59952361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962539_59962617_59962826_59963285_59964607
transcript_60939.known	chr17	-	1809	7	FSM	ENSG00000189050.16	ENST00000466544.5	1809	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	21.7389818835504	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTAATAAGTGAAAATAA	-17	True	NA	-33	True	NA	NA	NA	59964761	59952395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962826_59963285_59964607
transcript_6094.known	chr1	-	961	9	FSM	ENSG00000142856.17	ENST00000271002.15	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	90.3949666740356	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-19	True	NA	-10	True	AATAAA	-19	NA	63523225	63440769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_60940.known	chr17	-	884	3	FSM	ENSG00000189050.16	ENST00000477207.2	884	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTACTGTTAAAGTAGT	7	True	NA	NA	False	AAGAAA	-7	NA	59964737	59962320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59962617_59962826_59963285_59964607
transcript_60942.nic	chr17	-	965	7	ISM	ENSG00000068097.16	ENST00000587003.5	3566	20	-19	26148	-18	98	5prime_fragment	FALSE	canonical	3	87	junction_3	14.3874945699382	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTATGTTTATTTAG	-11	True	NA	0	True	NA	NA	NA	60078940	60069710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_60069849_60070705_60070808_60072214_60072330_60073163_60073280_60073745_60073887_60076129_60076238_60078695
transcript_60945.known	chr17	-	561	4	FSM	ENSG00000261040.8	ENST00000590012.5	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.32049379893857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCATACTATTTGA	-2	True	NA	-6	True	AATAAA	-13	NA	60088313	60083571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085102_60085204_60085931_60086080_60088196
transcript_60946.known	chr17	-	558	4	FSM	ENSG00000261040.8	ENST00000589987.6	670	4	112	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_3	4.32049379893857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACTATTTGAGTTATT	173	False	NA	0	True	AATAAA	-19	NA	60088257	60083565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085102_60085204_60085931_60086127_60088196
transcript_60947.known	chr17	-	447	3	FSM	ENSG00000261040.8	ENST00000566140.6	523	3	76	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACTATTTGAGTTATT	137	False	NA	0	True	AATAAA	-19	NA	60088293	60083565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085054_60085204_60088196
transcript_60948.known	chr17	-	567	3	FSM	ENSG00000261040.8	ENST00000587298.2	577	3	0	10	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCATACTATTTGA	NA	False	NA	-6	True	AATAAA	-13	NA	60088467	60083571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085102_60085204_60088196
transcript_60949.known	chr17	-	1622	5	FSM	ENSG00000267248.4	ENST00000668564.1	1622	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.82915619758885	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGACTTTGTTCTTGT	NA	False	NA	NA	False	AATAAA	-27	NA	60135713	60126532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60126866_60128540_60128660_60128955_60129091_60132435_60132513_60134755
transcript_60951.known	chr17	-	786	4	FSM	ENSG00000267248.4	ENST00000590744.2	1563	4	720	57	527	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCAGACTTTGTTCTT	662	False	NA	NA	False	AATAAA	-25	NA	60134998	60126534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60126866_60128955_60129091_60132435_60132513_60134755
transcript_60953.known	chr17	-	1361	3	FSM	ENSG00000267248.4	ENST00000658811.2	1374	3	12	1	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACTTTGTTCTTGTCA	NA	False	NA	NA	False	AATAAA	-29	NA	60135704	60126530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60126866_60132435_60132513_60134755
transcript_60954.known	chr17	-	1384	2	FSM	ENSG00000267248.4	ENST00000670169.1	1384	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGCGTGGTGGCATGTAC	-22	True	NA	NA	False	AAAAAG	-10	NA	60135682	60132055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60132513_60134755
transcript_60955.known	chr17	+	1123	8	FSM	ENSG00000167434.10	ENST00000300900.9	1123	8	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	5.35666664550076	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAAGTGTGTTTTT	0	True	NA	8	True	ATTAAA	-24	NA	60149972	60159546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60150093_60155313_60155368_60156559_60156716_60157426_60157573_60157689_60157789_60158060_60158128_60158282_60158447_60159229
transcript_60957.known	chr17	-	6937	34	FSM	ENSG00000170832.13	ENST00000300896.9	6937	34	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_27	31.3445557535957	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAACTGTATAAAAAGTA	-2	True	NA	-50	True	AATAAA	-21	NA	60392133	60177326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60179429_60180544_60180638_60181323_60181749_60183164_60183454_60185459_60185652_60190562_60190684_60192843_60192931_60198259_60198445_60205446_60205659_60207020_60207133_60208058_60208211_60208653_60208829_60209369_60209544_60211012_60211119_60211375_60211515_60212023_60212099_60213580_60213663_60214619_60214775_60219669_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_60959.nic	chr17	-	2378	16	ISM	ENSG00000170832.13	ENST00000300896.9	6937	34	-218	42244	57	0	5prime_fragment	FALSE	canonical	3	164	junction_9	24.1826384003069	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGTGAAAACTA	4	True	NA	NA	False	NA	NA	NA	60392351	60219570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_60964.known	chr17	-	1868	12	FSM	ENSG00000170832.13	ENST00000393003.7	1868	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.9622470758073	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAACACGAAGAAACTGAG	1	True	NA	NA	False	AATAAA	-17	NA	60391975	60249057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60249754_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_60966.nic	chr17	-	2979	11	ISM	ENSG00000170832.13	ENST00000393003.7	1868	12	-376	1892	57	-1892	5prime_fragment	FALSE	canonical	3	164	junction_4	20.4880452947566	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAGGAATAAATGG	4	True	NA	NA	False	NA	NA	NA	60392351	60250949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_60972.known	chr17	-	430	3	FSM	ENSG00000170832.13	ENST00000589761.1	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	5.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCATTAGAGAAATATA	427	False	NA	NA	False	AATAAA	-24	NA	60391928	60301449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60301705_60345480_60345609_60391881
transcript_60973.nic	chr17	-	1722	2	ISM	ENSG00000170832.13	ENST00000589761.1	430	3	-202	42686	3	-42537	5prime_fragment	FALSE	canonical	3	234	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAGGAATTTTAGG	1	True	NA	NA	False	NA	NA	NA	60392130	60344135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_60345609_60391881
transcript_60975.known	chr17	-	436	2	FSM	ENSG00000170832.13	ENST00000590297.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAAGGTCTGTTTTCTG	86	False	NA	NA	False	AATAAA	-23	NA	60422337	60421207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60421552_60422245
transcript_60978.known	chr17	-	2319	1	FSM	ENSG00000213228.5	ENST00000588627.1	2319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3643	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	60435996	60433677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60433700_60436000
transcript_60979.known	chr17	-	6492	13	FSM	ENSG00000062725.10	ENST00000083182.8	6492	13	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_1	9.9173669220548	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTGTATCTGTTTCC	-14	True	NA	-10	True	AATAAA	-16	NA	60526242	60443157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60447835_60451879_60452046_60454301_60454493_60456295_60456382_60460662_60460788_60461809_60461916_60461993_60462062_60464020_60464111_60466290_60466460_60479147_60479272_60494465_60494618_60500398_60500488_60525793
transcript_60988.known	chr17	+	932	1	FSM	ENSG00000259349.3	ENST00000661567.1	932	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTCTATATAAATTC	8	True	NA	NA	False	AATAAA	-13	NA	60526303	60527235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60526300_60527200
transcript_60991.known	chr17	+	3517	24	FSM	ENSG00000141376.23	ENST00000407086.8	3517	24	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_9	13.4127439893279	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	-11	True	NA	13	True	AATAAA	-22	NA	60677850	61392831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60677915_60679452_60679541_60683981_60684037_60689685_60689762_60709218_60709326_60747197_60747280_60808003_60808077_60868575_60868684_60874661_60874739_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61391976
transcript_60992.known	chr17	+	2948	16	FSM	ENSG00000141376.23	ENST00000588874.5	2948	16	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	13.2648239926339	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAGTTGCTGGGGTA	NA	False	NA	12	True	AATAAA	-21	NA	60887049	61392830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60887212_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61391976
transcript_61.known	ERCC-00144	+	521	1	FSM	ERCC-00144A	DQ854995	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	170	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00144_+_0_500
transcript_61000.known	chr17	+	2094	4	FSM	ENSG00000141376.23	ENST00000592702.5	2094	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.1088341484633	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGAGTTGCTGGGGTAA	-6	True	NA	13	True	AATAAA	-22	NA	61245215	61392831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_61245372_61353587_61354503_61368326_61368495_61391976
transcript_61001.known	chr17	+	471	1	FSM	ENSG00000227694.1	ENST00000437246.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	301	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGCCTAAT	14	False	NA	-40	True	NA	NA	NA	61069870	61070341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_61069900_61070300
transcript_61002.known	chr17	-	247	2	FSM	ENSG00000267449.1	ENST00000593107.1	247	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61070356	61069855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61070005_61070258
transcript_61003.known	chr17	-	799	1	FSM	ENSG00000253506.3	ENST00000521764.3	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAATGCTCTCTTTT	-12	True	NA	NA	False	AATAAA	-29	NA	61591219	61590420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61590400_61591200
transcript_61005.known	chr17	-	8182	20	FSM	ENSG00000136492.10	ENST00000259008.7	8182	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	21.4669752161488	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTTTAGGGCTGCT	-26	True	NA	NA	False	ATTAAA	-15	NA	61863528	61679138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61684141_61685835_61686166_61693429_61693513_61715950_61716064_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_61008.known	chr17	-	2889	18	FSM	ENSG00000136492.10	ENST00000683381.1	2889	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	35.5746692665667	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGACCACATCTTCTTC	93	False	NA	NA	False	NA	NA	NA	61863409	61739116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61739411_61743012_61743135_61744431_61744592_61776400_61776563_61778119_61778180_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_61010.known	chr17	-	2807	17	FSM	ENSG00000136492.10	ENST00000584322.2	2807	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	28.5041115455297	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCCATTTTTGCCTAT	175	False	NA	NA	False	AATAAA	-26	NA	61863327	61739056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61739411_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_61018.known	chr17	-	1818	7	FSM	ENSG00000136492.10	ENST00000577913.2	1818	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.7229619700658	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGTTCTTACAATGATTA	NA	False	NA	NA	False	AATAAA	-21	NA	61863559	61844930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61845820_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861566_61863283
transcript_61019.known	chr17	-	1628	7	FSM	ENSG00000136492.10	ENST00000682369.1	1628	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.7229619700658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTGAGTTCTTACAAT	132	False	NA	NA	False	AATAAA	-16	NA	61863370	61844935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61845820_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_61020.known	chr17	-	6128	25	FSM	ENSG00000108506.13	ENST00000251334.7	6128	25	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_24	19.630926210673	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTAGTTTTTGTGTTTCA	0	True	NA	-1	True	TATAAA	-25	NA	61927982	61865366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927653
transcript_61021.known	chr17	-	5837	25	FSM	ENSG00000108506.13	ENST00000647009.1	5837	25	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_24	23.2217196583046	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATATTCTTTATCAAAC	0	True	NA	-24	True	TATAAA	-2	NA	61927982	61865389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61867727_61867832_61868010_61869033_61869140_61869272_61869381_61869736_61869989_61872264_61872461_61874912_61875039_61877886_61878089_61881006_61881172_61884900_61885006_61889785_61889895_61891512_61891690_61893764_61893900_61895314_61895384_61897468_61897584_61897667_61897740_61904459_61904586_61907407_61907635_61911519_61911694_61911939_61912071_61919399_61919514_61921724_61921828_61924960_61925100_61926351_61926663_61927921
transcript_61024.known	chr17	-	10461	30	FSM	ENSG00000108510.10	ENST00000397786.7	10461	30	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_27	13.6121754270694	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGTCTTATTCTGTT	-6	True	NA	0	True	AATAAA	-19	NA	62065278	61942604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61946601_61946916_61947018_61950824_61950999_61952964_61953114_61955381_61955568_61955679_61955839_61956338_61956482_61960866_61961091_61961587_61961780_61962751_61962972_61965005_61965469_61966461_61966652_61968034_61968259_61972726_61972889_61982197_61983115_61984170_61984368_61984650_61984866_61984999_61985091_61987006_61987129_61992539_61992622_61995151_61995366_62010549_62011234_62029540_62029652_62029850_62030014_62031443_62031639_62033786_62033985_62035462_62035609_62052536_62052706_62063066_62063302_62065139
transcript_61025.known	chr17	+	444	2	FSM	ENSG00000239527.1	ENST00000466210.1	444	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAATAGTGAAAACACT	27	False	NA	NA	False	NA	NA	NA	62397396	62398142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62397745_62398046
transcript_61026.known	chr17	+	348	1	FSM	ENSG00000239809.1	ENST00000495438.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	1112	False	NA	NA	False	NA	NA	NA	62381667	62382015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62381700_62382000
transcript_61029.nnic	chr17	+	690	5	NNC	ENSG00000087995.16	novel	1556	8	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	119.969527380915	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	NA	False	NA	-15	True	NA	NA	NA	62423851	62448914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_62424013_62440740_62440757_62444836_62444944_62447700_62447767_62448574
transcript_6103.nic	chr1	-	1198	8	NIC	ENSG00000142856.17	novel	945	6	NA	NA	13	-155	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	157.328332100841	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTTTAAATAATTTCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	63523489	63449457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_63449816_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_61032.known	chr17	+	5799	9	FSM	ENSG00000087995.16	ENST00000311506.10	5799	9	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_8	23.0908531674341	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGGCTCTGAATGGTA	7	True	NA	NA	False	AATAAA	-16	NA	62423896	62453385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62424013_62424218_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_61033.known	chr17	+	1556	8	FSM	ENSG00000087995.16	ENST00000333483.14	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	24.5755810444732	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	NA	False	NA	-15	True	NA	NA	NA	62423874	62448914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_61034.known	chr17	+	5405	23	FSM	ENSG00000146872.19	ENST00000683536.1	5405	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	92.0792081770494	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	50	False	NA	-28	True	ATTAAA	-43	NA	62479168	62615444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62479291_62481120_62481207_62508407_62508554_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_61036.known	chr17	+	5345	22	FSM	ENSG00000146872.19	ENST00000682203.1	5345	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	84.491355271686	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	11	False	NA	-28	True	ATTAAA	-43	NA	62479129	62615444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62479291_62481123_62481207_62508407_62508554_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_61037.known	chr17	+	5640	22	FSM	ENSG00000146872.19	ENST00000346027.10	5640	22	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	67.2455479479561	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGCCTCTTGATTTG	NA	False	NA	9	True	ATTAAA	-20	NA	62478824	62615481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62524235_62524332_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_6104.known	chr1	-	873	8	FSM	ENSG00000142856.17	ENST00000460394.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	169.407731794735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGATTTTGAGCTATA	24	True	NA	NA	False	ATTAAA	-15	NA	63523182	63451724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63452065_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_61049.known	chr17	-	447	1	FSM	ENSG00000239246.3	ENST00000460492.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGAGGATTCTTTTG	32	False	NA	NA	False	NA	NA	NA	62516767	62516320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_62516300_62516800
transcript_61059.known	chr17	+	423	1	FSM	ENSG00000277463.1	ENST00000617734.1	423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATTTAAAAATTTTAT	8413	False	NA	73	True	AATACA	-19	NA	62626030	62626453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62626000_62626500
transcript_61061.nic	chr17	-	1218	5	NIC	ENSG00000173838.12	novel	559	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	0.866025403784439	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCATTTGATTTCTTACC	64	False	NA	NA	False	AATAAA	-18	NA	62808334	62749975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_62750537_62759834_62760007_62788479_62788600_62801645_62801753_62808076
transcript_61062.known	chr17	-	3151	6	FSM	ENSG00000008283.16	ENST00000392976.5	3151	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	37.075059001976	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTCTCGCCTGTTATCT	2	True	NA	-10	True	AATAAA	-11	NA	63446184	63432306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63445897
transcript_61063.known	chr17	-	2929	6	FSM	ENSG00000008283.16	ENST00000360793.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	17.4126390877431	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCGCCTGTTATCTTCC	11	True	NA	-7	True	AATAAA	-14	NA	63446306	63432303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63446244
transcript_61070.known	chr17	+	1367	8	FSM	ENSG00000136485.16	ENST00000431926.7	1627	8	260	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	85.5216883817986	2307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGTGACGAATTC	0	True	NA	44	True	AATAAA	-27	NA	63550481	63594279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999_63589238_63594202
transcript_61073.known	chr17	+	6324	7	FSM	ENSG00000136485.16	ENST00000614556.5	6324	7	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_3	22.0504472113883	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGACTGAATTTCTTT	-5	True	NA	31	True	AATAAA	-14	NA	63550476	63594266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999
transcript_61081.known	chr17	+	1218	5	FSM	ENSG00000136463.9	ENST00000684587.1	1218	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	92.25609735947	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTCTTAATAATAACGGTG	119	False	NA	-14	True	NA	NA	NA	63601083	63608329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63601364_63604536_63604641_63606312_63606441_63607286_63607465_63607801
transcript_61085.known	chr17	-	2195	14	FSM	ENSG00000108588.15	ENST00000403162.7	2195	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	265.004454579061	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATGTCTACATTAAAC	10	True	NA	-6	True	AATAAA	-17	NA	63773570	63746402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63772776_63772864_63773411
transcript_61089.known	chr17	-	2166	13	FSM	ENSG00000266173.7	ENST00000336174.12	2166	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	54.2240081103892	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	11	True	NA	-18	True	ATTAAA	-25	NA	63741799	63702831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_61092.known	chr17	-	3283	13	FSM	ENSG00000108588.15	ENST00000225726.10	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_3	54.8723265610473	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGCCGCCTTGAC	-17	True	NA	-6	True	ATTAAA	-14	NA	63773597	63745254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_61098.known	chr17	-	2209	12	FSM	ENSG00000266173.7	ENST00000375840.9	2209	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_10	39.1065507818011	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	2	True	NA	-21	True	ATTAAA	-22	NA	63741874	63702834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_61099.known	chr17	-	2140	12	FSM	ENSG00000266173.7	ENST00000638702.1	2140	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	43.8540027103457	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGGCATTGTGTCTG	-22	True	NA	-24	True	ATTAAA	-19	NA	63741832	63702837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728357_63728414_63741740
transcript_6110.nic	chr1	-	1019	7	NIC	ENSG00000142856.17	novel	961	9	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	174.855575324958	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	NA	False	NA	-10	True	AATAAA	-19	NA	63523489	63440769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63508527_63508571_63523128
transcript_61100.known	chr17	-	1865	12	FSM	ENSG00000266173.7	ENST00000638276.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	47.8848481013144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGTGTGTGCCTCAT	11	True	NA	NA	False	NA	NA	NA	63741799	63703012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_61102.known	chr17	-	1342	12	FSM	ENSG00000266173.7	ENST00000638193.1	1342	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	64.0316295808318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGGAGTTCTGAGCCTCT	11	True	NA	NA	False	NA	NA	NA	63741799	63703612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_61105.known	chr17	-	2153	11	FSM	ENSG00000266173.7	ENST00000638708.1	2153	11	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_9	40.532086055371	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	16	False	NA	-5	True	ATTAAA	-38	NA	63741860	63702818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_61106.known	chr17	-	2130	11	FSM	ENSG00000266173.7	ENST00000639835.1	2130	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	38.5180477179205	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	15	False	NA	-5	True	ATTAAA	-38	NA	63741861	63702818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_61108.known	chr17	-	1925	11	FSM	ENSG00000266173.7	ENST00000640086.1	1925	11	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	48.8114740609214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTTTCGTTGTCAG	-5	True	NA	-73	True	NA	NA	NA	63741815	63702886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704431_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_61109.known	chr17	-	2086	11	FSM	ENSG00000266173.7	ENST00000640979.1	2086	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	53.7311827526623	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGAATGGCATTGTGTC	11	True	NA	-26	True	ATTAAA	-17	NA	63741799	63702839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_61111.known	chr17	-	2959	10	FSM	ENSG00000266173.7	ENST00000245865.10	2959	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.5566410010427	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	49	True	NA	-21	True	ATTAAA	-22	NA	63741761	63702834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63704909_63706634_63706731_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_61122.known	chr17	-	1168	9	FSM	ENSG00000266173.7	ENST00000579340.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	55.0817574156816	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTGTGTCAGAGGCCA	-22	True	NA	NA	False	NA	NA	NA	63741832	63704207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63704583_63706634_63706740_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_61131.known	chr17	+	4337	19	FSM	ENSG00000198231.14	ENST00000578681.5	4337	19	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_1	132.242202038532	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	61	False	NA	11	True	AGTAAA	-17	NA	63773862	63819317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63774377_63775107_63775179_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_61132.known	chr17	-	602	5	FSM	ENSG00000136490.9	ENST00000578993.5	602	5	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_2	488.157953433108	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCCTGCTTCCTGCTTCG	18	True	NA	NA	False	NA	NA	NA	63700102	63698334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63698819_63699027_63699070_63699256_63699349_63700031
transcript_61133.known	chr17	-	756	5	FSM	ENSG00000136490.9	ENST00000578061.5	756	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	504.427150339868	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCCCTGGGAGGCCCC	4538	False	NA	NA	False	NA	NA	NA	63699861	63698288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63699802
transcript_61136.known	chr17	-	3192	5	FSM	ENSG00000136490.9	ENST00000259006.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_4	52.4690384893796	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGAGCCAGCATGTCC	-5	True	NA	-11	True	AATAAA	-24	NA	63700125	63695887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700031
transcript_61139.known	chr17	-	566	5	FSM	ENSG00000136490.9	ENST00000584645.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	506.591736509786	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACAAGGAGCTCTGGGC	3	True	NA	NA	False	NA	NA	NA	63701172	63698608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700983
transcript_61142.known	chr17	-	709	4	FSM	ENSG00000136490.9	ENST00000579814.1	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_3	59.7550555741242	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCAGGTGGGAAGGGGA	-12	True	NA	NA	False	NA	NA	NA	63700132	63698466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63699070_63699256_63699349_63700031
transcript_61146.known	chr17	-	588	2	FSM	ENSG00000108588.15	ENST00000584112.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCACCTTTTACATTAACA	16	True	NA	NA	False	NA	NA	NA	63773564	63765759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63766195_63773411
transcript_61147.known	chr17	+	1824	1	FSM	ENSG00000279369.1	ENST00000623228.1	1824	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTATCTAGTGTAAGAGGT	6	True	NA	-9	True	AATAAA	-4	NA	63700846	63702670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63700800_63702700
transcript_61148.known	chr17	-	1264	10	FSM	ENSG00000266173.7	ENST00000578801.6	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	68.2544259859144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTACCACCGAACCTTC	28	True	NA	NA	False	NA	NA	NA	63741782	63704416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63704909_63706634_63706740_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_61149.known	chr17	-	2788	2	FSM	ENSG00000266173.7	ENST00000578507.2	2788	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGACTCCGTCTCAAAG	-8	True	NA	NA	False	NA	NA	NA	63741818	63725703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63728414_63741740
transcript_6115.nic	chr1	-	2046	7	ISM	ENSG00000142856.17	ENST00000460394.5	873	8	-213	893	107	-893	5prime_fragment	FALSE	canonical	3	402	junction_4	50.0422044100999	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAATTTAGAGG	NA	False	NA	NA	False	AAAAAG	-16	NA	63523395	63452617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_61150.known	chr17	-	1719	12	FSM	ENSG00000108588.15	ENST00000582252.1	1719	12	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	50.704784849278	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCGTGCCACACTGAGT	10	True	NA	NA	False	AATAAA	-15	NA	63773570	63751769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_61151.known	chr17	+	3959	18	FSM	ENSG00000198231.14	ENST00000389924.7	3959	18	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_5	51.2158063836684	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	-8	True	NA	11	True	AGTAAA	-17	NA	63774169	63819317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_61156.known	chr17	+	1494	12	FSM	ENSG00000087191.13	ENST00000375812.8	1494	12	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	521.637472669058	2575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGTCTGTTAATGAGG	207	False	NA	32	True	AATAAA	-25	NA	63827683	63832026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_61161.known	chr17	+	1331	12	FSM	ENSG00000087191.13	ENST00000310144.11	1331	12	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_7	153.961248746892	12411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGACTCCAGTCTGTT	-6	True	NA	25	True	AATAAA	-18	NA	63827430	63832019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63827515_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_61162.known	chr17	-	615	6	FSM	ENSG00000108592.17	ENST00000580272.5	615	6	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_1	72.0177755835322	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGCTTCATCACAAAGGT	0	True	NA	NA	False	NA	NA	NA	63827064	63825383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63825437_63825535_63825636_63826055_63826136_63826257_63826305_63826566_63826673_63826835
transcript_61163.known	chr17	+	828	7	FSM	ENSG00000087191.13	ENST00000582130.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	669.262467198034	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGCCACCAAGAACATC	16	True	NA	NA	False	NA	NA	NA	63827452	63831203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63827515_63828137_63828210_63829493_63829564_63829851_63829950_63830270_63830502_63830808_63830936_63831035
transcript_61165.known	chr17	-	1800	13	FSM	ENSG00000108604.17	ENST00000225742.13	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	242.949740458575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGGTCAGAGCTGGC	-4	True	NA	NA	False	NA	NA	NA	63842466	63832603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842380
transcript_61166.known	chr17	-	2464	13	FSM	ENSG00000108604.17	ENST00000448276.7	2464	13	0	0	0	0	multi-exon	TRUE	canonical	3	839	junction_2	38.5518229861515	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCCTGGACCTGGTCC	21	True	NA	-12	True	AATAAA	-16	NA	63842685	63832080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842458
transcript_61167.known	chr17	-	827	5	FSM	ENSG00000213218.11	ENST00000392886.7	827	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCTGACTAGGTGTCAT	8394	False	NA	NA	False	AATAAA	-16	NA	63873677	63872015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63872324_63872576_63872742_63872834_63872955_63873178_63873340_63873604
transcript_61168.known	chr17	-	903	5	FSM	ENSG00000136487.18	ENST00000423893.7	903	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.74165738677394	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGACTAGGTGTCC	-1	True	NA	-9	True	AATAAA	-15	NA	63881944	63880214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63880519_63880771_63880937_63881028_63881149_63881358_63881520_63881791
transcript_61169.known	chr17	-	794	5	FSM	ENSG00000136487.18	ENST00000456543.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.74165738677394	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGTTTGACTAGGTG	229	False	NA	-12	True	AATAAA	-12	NA	63881842	63880217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63880519_63880775_63880937_63881028_63881149_63881358_63881520_63881791
transcript_61172.known	chr17	-	1138	4	FSM	ENSG00000136487.18	ENST00000332800.7	1138	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.39934634239519	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCATCATTTTGTTTGAC	8	True	NA	-18	True	AATAAA	-6	NA	63881935	63880223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63880937_63881028_63881149_63881358_63881520_63881791
transcript_61174.known	chr17	-	1246	6	FSM	ENSG00000007312.13	ENST00000006750.8	1246	6	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	1.49666295470958	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-7	True	NA	-3	True	AATAAA	-21	NA	63932331	63928739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931386_63932194
transcript_61175.known	chr17	-	1254	6	FSM	ENSG00000007312.13	ENST00000392795.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.99332590941915	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-12	True	NA	-3	True	AATAAA	-21	NA	63932336	63928739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931389_63932194
transcript_61178.known	chr17	-	823	5	FSM	ENSG00000259384.7	ENST00000323322.10	823	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTGACTAGGTGTCC	208	False	NA	NA	False	AATAAA	-15	NA	63918839	63917202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63917507_63917759_63917925_63918016_63918137_63918345_63918507_63918766
transcript_61180.known	chr17	-	378	5	FSM	ENSG00000007312.13	ENST00000349817.2	378	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.89711431702997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGGTCGCCCCATGAC	88	False	NA	NA	False	NA	NA	NA	63932261	63929225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63931334_63931386_63932194
transcript_61183.known	chr17	-	537	3	FSM	ENSG00000259384.7	ENST00000342364.8	537	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTGACTAGGTGTCC	-3	True	NA	NA	False	AATAAA	-15	NA	63918838	63917202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63917507_63918345_63918507_63918766
transcript_61184.known	chr17	-	1159	4	FSM	ENSG00000007312.13	ENST00000559358.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATAAACGGTGTGTCCTG	1835	False	NA	-31	True	NA	NA	NA	63930514	63928767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073
transcript_61185.nic	chr17	-	1728	4	ISM	ENSG00000007314.12	ENST00000435607.3	7805	24	11204	12672	-21	-3272	internal_fragment	FALSE	canonical	3	12	junction_1	5.43650214343336	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGATGTGGTTATTAT	NA	False	NA	NA	False	NA	NA	NA	63961714	63951225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_63951901_63957161_63957519_63959264_63959439_63961192
transcript_61186.nic	chr17	-	1430	3	ISM	ENSG00000007314.12	ENST00000435607.3	7805	24	11204	18231	-21	2588	internal_fragment	FALSE	canonical	3	13	junction_1	5.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCAGTCCCAGCTCCTT	NA	False	NA	NA	False	AGTAAA	-30	NA	63961714	63956784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_63957519_63959264_63959439_63961192
transcript_61187.known	chr17	-	567	2	FSM	ENSG00000007314.12	ENST00000581514.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGCAGGGTTGGAATAT	NA	False	NA	NA	False	NA	NA	NA	63961693	63959372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63959439_63961192
transcript_61188.known	chr17	+	3128	6	FSM	ENSG00000224383.8	ENST00000412177.6	3128	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3.38230690505755	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTTAGATGGGCATT	-4	True	NA	NA	False	ATTAAA	-21	NA	63998350	64004305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63998425_63998706_63998783_63998967_63999075_64001083_64001311_64001466_64001538_64001732
transcript_61189.known	chr17	-	1135	5	FSM	ENSG00000108622.11	ENST00000579788.6	1135	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.433012701892219	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGCCCACAGTGTCT	-30	True	NA	NA	False	AATACA	-15	NA	64020633	64002594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64002926_64003643_64003965_64005106_64005374_64006630_64006736_64020522
transcript_61192.known	chr17	+	106	2	FSM	ENSG00000266402.4	ENST00000580828.1	106	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCGGTGTGTGTC	-1	True	NA	56	True	AATAAA	-16	NA	64145969	64146309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64145996_64146229
transcript_61194.known	chr17	+	278	2	FSM	ENSG00000266402.4	ENST00000582965.2	290	2	12	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	0	2139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGTCCGGCTGCTAG	-1	True	NA	31	True	NA	NA	NA	64145969	64146476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64146001_64146229
transcript_61197.known	chr17	-	1601	9	FSM	ENSG00000256525.8	ENST00000585104.2	1601	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	62.6333577257359	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATATCATCAGCTAAG	9974	False	NA	-73	True	ATTAAA	-15	NA	64496939	64477851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64477989_64480288_64480390_64481245_64481447_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_612.nnic	chr1	+	1370	7	NNC	ENSG00000228794.11	novel	5333	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	34.7918413169269	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCACCTACTGTGAAGA	762	False	NA	NA	False	AATAAA	-17	NA	827597	854096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853439_853487
transcript_61202.known	chr17	-	1557	9	FSM	ENSG00000256525.8	ENST00000671755.1	1557	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	63.0669287344802	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATAAATATTCTTCT	9974	False	NA	-33	True	NA	NA	NA	64496939	64477811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64483389_64483507_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_61212.known	chr17	-	1582	8	FSM	ENSG00000256525.8	ENST00000539111.7	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	11.8855082399723	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-15	True	NA	-6	True	AATAAA	-17	NA	64497054	64477784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_61213.nic	chr17	-	1472	8	NIC	ENSG00000256525.8	novel	1582	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	47.0644369401122	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	9844	False	NA	-6	True	AATAAA	-17	NA	64497069	64477784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496531
transcript_61221.nic	chr17	-	1545	7	NIC	ENSG00000256525.8	novel	1582	8	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	53.2186266472766	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGTTGTCTTATGTTC	9793	False	NA	-8	True	AATAAA	-15	NA	64497120	64477786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_64477989_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_61225.known	chr17	-	1731	5	FSM	ENSG00000256525.8	ENST00000585141.5	1731	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	13.0479883506999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGTCAGGATGGGATCAA	20	True	NA	NA	False	AAGAAA	-31	NA	64497019	64485157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_61229.known	chr17	+	2754	20	FSM	ENSG00000258890.8	ENST00000556440.7	2754	20	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_4	53.3092685782078	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	-14	True	NA	12	True	AATAAA	-16	NA	64506976	64537946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64516722_64516829_64519320_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
transcript_6124.known	chr1	-	657	5	FSM	ENSG00000142856.17	ENST00000462285.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	207.279250046887	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGGAGCAACAATGCAT	-3	True	NA	NA	False	ATTAAA	-19	NA	63523209	63453614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63453975_63454379_63454474_63454889_63454969_63508527_63508571_63523128
transcript_61246.known	chr17	-	3868	14	FSM	ENSG00000108654.16	ENST00000577922.6	3868	14	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_13	1067.03991374025	3066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	182	False	NA	-7	True	AATAAA	-14	NA	64506731	64498257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506260_64506513
transcript_61247.known	chr17	-	4461	14	FSM	ENSG00000108654.16	ENST00000585111.2	4461	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	1078.94807416556	3088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	NA	False	NA	-7	True	AATAAA	-14	NA	64507562	64498257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754
transcript_61250.known	chr17	-	2021	13	FSM	ENSG00000108654.16	ENST00000578804.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_12	1099.4193511678	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATGTAAATGTCTGTT	957	False	NA	NA	False	NA	NA	NA	64505956	64499913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64505745
transcript_61257.known	chr17	-	3684	13	FSM	ENSG00000108654.16	ENST00000225792.10	3684	13	0	0	0	0	multi-exon	FALSE	canonical	3	3473	junction_2	264.756321401817	5762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-2	True	NA	-3	True	AATAAA	-18	NA	64506289	64498253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_61258.known	chr17	-	3558	12	FSM	ENSG00000108654.16	ENST00000581230.5	3558	12	0	0	0	0	multi-exon	FALSE	canonical	3	3649	junction_9	220.01945819284	3151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATTGTACTTTATTT	-2	True	NA	-7	True	AATAAA	-23	NA	64506289	64499615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_61259.known	chr17	+	903	4	FSM	ENSG00000258890.8	ENST00000581056.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	5.43650214343336	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAGAACTTAACTGTCT	20	True	NA	NA	False	NA	NA	NA	64507010	64514807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247
transcript_61263.known	chr17	-	1168	6	FSM	ENSG00000214176.10	ENST00000584585.2	1191	6	20	3	3	0	multi-exon	FALSE	canonical	0	0	junction_1	9.30376267969041	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAGATAATCTTTTT	9621	False	NA	NA	False	AATAAA	-37	NA	64837136	64820693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64821018_64821766_64822053_64822253_64822394_64824624_64824873_64829160_64829250_64837055
transcript_61266.known	chr17	+	631	2	FSM	ENSG00000265218.1	ENST00000584959.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAGACAGAAATTGCC	NA	False	NA	3	True	AATAAA	-14	NA	64892823	64910180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64892869_64909594
transcript_6129.known	chr1	+	2178	14	FSM	ENSG00000203965.13	ENST00000371088.5	2178	14	0	0	0	0	multi-exon	TRUE	canonical	1	11	junction_7	9.00887136735837	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGTGTTCTTATTTA	-1	True	NA	7	True	ATTAAA	-19	NA	63523524	63572693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63523635_63525571_63525760_63531819_63532032_63532669_63532757_63533453_63533650_63534094_63534217_63545915_63546058_63551724_63551835_63555357_63555516_63557113_63557248_63561708_63561858_63568309_63568520_63571020_63571129_63572441
transcript_61292.nnic	chr17	-	1057	5	FSM	ENSG00000214174.9	ENST00000690715.1	993	5	-76	12	-76	0	multi-exon	FALSE	canonical	3	23	junction_4	78.0076118080793	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	330	False	NA	72	True	AATAAA	-15	NA	64975693	64968037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64975559
transcript_613.nnic	chr1	+	1659	7	NNC	ENSG00000228794.11	novel	1932	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	34.7918413169269	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAGGTACAATAGCTA	762	False	NA	10	True	AATAAA	-12	NA	827597	854385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853439_853487
transcript_61309.nnic	chr17	-	939	4	FSM	ENSG00000214174.9	ENST00000690613.1	921	4	-25	7	-16	0	multi-exon	FALSE	canonical	3	29	junction_3	93.8130528705302	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	390	False	NA	74	True	AATAAA	-17	NA	64975633	64968035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972317_64972663_64972753_64972928_64975559
transcript_61311.nnic	chr17	-	778	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-73	12	-73	0	multi-exon	FALSE	canonical	3	29	junction_3	83.5915997906222	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	333	False	NA	72	True	AATAAA	-15	NA	64975690	64968037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
transcript_61314.nnic	chr17	-	648	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-16	85	-16	0	multi-exon	FALSE	canonical	3	29	junction_3	83.5915997906222	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTAGAACCTTCTTTCA	390	False	NA	-1	True	AATAAA	-29	NA	64975633	64968110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
transcript_61322.known	chr17	-	6249	4	FSM	ENSG00000120063.10	ENST00000439174.7	6249	4	0	0	0	0	multi-exon	TRUE	canonical	3	230	junction_1	6.59966329107444	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTATGATGTTATTTAACA	-34	True	NA	-5	True	AATAAA	-19	NA	65056740	65009288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_65014830_65018252_65018304_65053501_65053729_65056310
transcript_61324.known	chr17	+	2387	19	FSM	ENSG00000108370.17	ENST00000584234.5	2387	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	5.14841459475693	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTAACTTTAAGTTTCT	27	False	NA	-10	True	NA	NA	NA	65137453	65227678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65189285_65189316_65190174_65190237_65193542_65193657_65197125_65197242_65201992_65202081_65204162_65204302_65207921_65208012_65210487_65210606_65225001_65225487_65227274
transcript_61328.known	chr17	+	645	10	FSM	ENSG00000108370.17	ENST00000577186.1	645	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	5.16636797225008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGTATTAAGAAGAATA	91	False	NA	NA	False	NA	NA	NA	65137591	65180037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65179995
transcript_61336.known	chr17	+	2492	19	FSM	ENSG00000108370.17	ENST00000262406.10	2492	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	4.05517502019881	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGTGTGTGTCTGGTTT	7	True	NA	15	True	AATAAA	-25	NA	65137369	65227703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65189285_65189316_65190174_65190237_65193542_65193657_65197125_65197242_65201992_65202081_65204162_65204302_65207921_65208008_65210487_65210606_65225001_65225487_65227274
transcript_61339.nnic	chr17	+	800	4	NNC	ENSG00000108370.17	novel	2736	3	NA	NA	-38	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	53.8392669588532	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGATGGATGCTTGATT	NA	False	NA	9	True	AATAAA	-1	NA	65100773	65111095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_65101043_65101206_65101297_65109191_65109253_65110715
transcript_61341.known	chr17	+	2736	3	FSM	ENSG00000108370.17	ENST00000638125.1	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	11	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGATTTCGTTGATT	9	True	NA	16	True	TATAAA	-19	NA	65100811	65113130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65101043_65101206_65101297_65110715
transcript_61343.known	chr17	+	761	3	FSM	ENSG00000108370.17	ENST00000583473.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGAGCACCTGCAGATC	4	True	NA	NA	False	NA	NA	NA	65137430	65158791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65137598_65153421_65153519_65158294
transcript_61344.known	chr17	+	563	2	FSM	ENSG00000108370.17	ENST00000582940.2	563	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTAATTCCTTAGCA	51	False	NA	27	True	AATAAA	-19	NA	65100877	65111113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65101043_65110715
transcript_61345.known	chr17	-	4260	11	FSM	ENSG00000168646.14	ENST00000307078.10	4260	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	37.8085969059948	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCCTCGTCTTTGAAT	0	True	NA	-5	True	ATTAAA	-19	NA	65561648	65528562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_65530103_65533911_65534080_65535625_65535722_65536319_65536554_65536868_65537064_65537323_65537836_65538202_65538344_65541454_65541558_65549519_65549661_65557805_65558737_65561449
transcript_61346.known	chr17	-	3447	27	FSM	ENSG00000154240.17	ENST00000535342.7	3447	27	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	5.53151273487594	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTTCTACTTTTTAT	-1	True	NA	1	True	ATTAAA	-21	NA	66192133	65635536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_65635975_65637123_65637189_65640963_65641066_65689128_65689219_65743067_65743218_65750661_65750725_65851803_65852035_65902151_65902335_65927581_65927690_65961462_65961599_66005689_66005770_66027500_66027561_66028312_66028406_66029122_66029253_66029868_66030024_66053735_66053880_66062962_66063082_66066777_66066878_66069914_66070002_66096250_66096329_66096584_66096633_66129745_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_61353.nic	chr17	-	1600	6	ISM	ENSG00000154240.17	ENST00000535342.7	3447	27	-1	493397	-1	47720	5prime_fragment	FALSE	canonical	3	20	junction_4	2.33238075793812	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTGTTATATAACATAT	-2	True	NA	NA	False	AATAAA	-23	NA	66192134	66128933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_61357.nic	chr17	-	2097	2	ISM	ENSG00000154240.17	ENST00000580624.1	569	3	-50	4695	-1	-4435	5prime_fragment	FALSE	canonical	3	23	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGGTACATAGAATTCAT	-2	True	NA	NA	False	AAGAAA	-8	NA	66192134	66181348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_66183308_66191996
transcript_61358.known	chr17	+	8964	17	FSM	ENSG00000154229.12	ENST00000413366.8	8964	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.87703732162098	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTAGTTGGCCTTAT	-3	True	NA	9	True	AATAAA	-15	NA	66302612	66810743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_66303025_66306095_66306128_66496200_66496284_66641354_66641467_66645382_66645512_66687110_66687268_66688301_66688437_66688950_66689048_66732687_66732826_66735488_66735663_66738763_66738856_66741658_66741722_66742621_66742761_66773986_66774068_66786866_66786975_66788838_66788980_66803872
transcript_61360.known	chr17	-	1872	14	FSM	ENSG00000198265.12	ENST00000417253.7	1872	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	12.5787460452545	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGGCTATCTAGGGA	0	True	NA	NA	False	AATATA	-3	NA	67245187	67167525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_61369.known	chr17	-	13817	33	FSM	ENSG00000198265.12	ENST00000358691.10	13817	33	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_4	15.2801635605611	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGATGTGTTTATTAT	-9	True	NA	-31	True	AATAAA	-16	NA	67245196	67070443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160363_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_61384.nnic	chr17	+	454	2	NNC	ENSG00000285877.1	novel	2511	5	NA	NA	1593	-15180	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGGTTCACACCTGT	1043	False	NA	6	True	AATAAA	-21	NA	67245874	67258323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_67245969_67257963
transcript_61385.nnic	chr17	+	582	2	NNC	ENSG00000285877.1	novel	2511	5	NA	NA	1593	-15052	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCATGGTGGTGCGTG	1043	False	NA	NA	False	ATTAAA	-14	NA	67245874	67258451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_67245969_67257963
transcript_61387.known	chr17	-	4356	11	FSM	ENSG00000197170.10	ENST00000356126.8	4356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_3	40.1950245677248	1194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	9	True	NA	-3	True	AATAAA	-20	NA	67366577	67337915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_61389.known	chr17	+	6182	10	FSM	ENSG00000154217.16	ENST00000580974.5	6182	10	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	88.4099597763415	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	20	True	NA	8	True	AATAAA	-17	NA	67377458	67697256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_61395.known	chr17	+	6241	9	FSM	ENSG00000154217.16	ENST00000581322.6	6241	9	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_3	100.294488258329	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	-30	True	NA	8	True	AATAAA	-17	NA	67377280	67697256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67692571
transcript_61397.known	chr17	+	6359	9	NNC	ENSG00000154217.16	novel	6182	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	84.5501884977201	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTAGCTTCCTCTCTCT	-30	True	NA	13	True	AATAAA	-22	NA	67377280	67697261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_67378203_67532801_67532951_67552256_67552346_67578183_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_61406.known	chr17	+	2844	18	FSM	ENSG00000130935.10	ENST00000253247.9	2844	18	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_10	73.7682708585956	1052	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTAATCTCTCAGTA	9	True	NA	NA	False	AATAAA	-15	NA	67717935	67744531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67718089_67719673_67719788_67719905_67719963_67721377_67721527_67722579_67722638_67724048_67724194_67726459_67726649_67734362_67734440_67735899_67736024_67736665_67736755_67737070_67737146_67737507_67737693_67737846_67737973_67738121_67738356_67738931_67739011_67739515_67739609_67743478_67743587_67743742
transcript_61418.known	chr17	+	11075	28	FSM	ENSG00000171634.19	ENST00000306378.11	11075	28	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	73.3847369410848	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGCAGTTTCTAATGA	-1	True	NA	11	True	AATAAA	-21	NA	67825502	67984378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540_67959876_67964211_67964405_67966571_67966657_67975771_67975959_67982251
transcript_6142.known	chr1	+	2337	11	FSM	ENSG00000079739.17	ENST00000371084.8	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_6	66.3502825917117	699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGTCGTCTTTTTTTC	15	True	NA	NA	False	AATAAA	-17	NA	63593410	63660245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63659585
transcript_61420.nic	chr17	+	1429	4	ISM	ENSG00000171634.19	ENST00000544778.6	7573	22	498	71009	-11	-17080	5prime_fragment	FALSE	canonical	3	112	junction_1	5.90668171555645	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAAAGACAAGAATGAG	327	False	NA	NA	False	AAAAAG	-35	NA	67826021	67874882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816
transcript_61423.nic	chr17	+	1163	3	ISM	ENSG00000171634.19	ENST00000544778.6	7573	22	498	79404	-11	-25475	5prime_fragment	FALSE	canonical	3	112	junction_1	6.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGAAAATTTGGTATT	327	False	NA	NA	False	AATGAA	-3	NA	67826021	67866487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_67826338_67853939_67854763_67866463
transcript_61426.nic	chr17	+	1139	2	ISM	ENSG00000171634.19	ENST00000544778.6	7573	22	498	91129	-11	-37200	5prime_fragment	FALSE	canonical	3	112	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAATCTGGTCTTAA	327	False	NA	NA	False	NA	NA	NA	67826021	67854762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_67826338_67853939
transcript_61427.known	chr17	+	2627	11	NNC	ENSG00000171634.19	novel	11292	30	NA	NA	-30	9804	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_8	54.0156458815407	253	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGGGTAAAATACACATT	417	False	NA	80	True	AAAAAG	-39	NA	67826111	67903882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67875555_67875745_67886127_67886317_67891843_67892035_67893369_67893679_67893679_67893726_67894033_67894166_67903788
transcript_61428.nnic	chr17	-	526	2	Antisense	novelGene_ENSG00000279880.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGTCTTCAAGAAAATAA	NA	False	NA	4	True	ATTAAA	-24	NA	67974960	67969656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_-_67969899_67974676
transcript_61430.known	chr17	-	1082	3	FSM	ENSG00000186665.10	ENST00000449250.3	1082	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	22	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAATAAAAAATAGT	25	True	NA	NA	False	ATTAAA	-5	NA	67993545	67991335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67992104_67993043_67993236_67993423
transcript_61431.nnic	chr17	-	1369	3	NIC	ENSG00000186665.10	novel	2105	4	NA	NA	175	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	67	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	156	False	NA	-23	True	AATAAA	-19	NA	67996294	67991098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_67992104_67993043_67993236_67996122
transcript_61432.known	chr17	-	1535	3	FSM	ENSG00000186665.10	ENST00000334461.7	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	22.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCAATAAATCTTGAC	2801	False	NA	-54	True	NA	NA	NA	67993649	67991129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67992104_67992900_67993236_67993423
transcript_61436.known	chr17	+	2456	11	FSM	ENSG00000182481.10	ENST00000537025.6	2456	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1410.71476918617	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGACTTCACCATGCCT	165	False	NA	8	True	AATAAA	-18	NA	68035959	68046842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68036557_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_61437.known	chr17	+	1977	11	FSM	ENSG00000182481.10	ENST00000330459.8	1977	11	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	342.90495767778	14860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	-7	True	NA	20	True	AATAAA	-30	NA	68035734	68046854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_61438.known	chr17	+	3043	10	FSM	ENSG00000182481.10	ENST00000677419.1	3043	10	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_5	361.223469699476	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTAATCCCAGCTACTCA	-12	True	NA	NA	False	AGTAAA	-43	NA	68035729	68047364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_61439.known	chr17	+	2007	11	FSM	ENSG00000182481.10	ENST00000584026.6	2007	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1410.42372711182	2043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	-7	True	NA	20	True	AATAAA	-30	NA	68035734	68046854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037079_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_61440.known	chr17	+	2082	10	FSM	ENSG00000182481.10	ENST00000679346.1	2082	10	0	0	0	0	multi-exon	FALSE	canonical	3	4251	junction_4	337.709313236863	1990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	-12	True	NA	20	True	AATAAA	-30	NA	68035729	68046854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_61441.known	chr17	+	2315	10	FSM	ENSG00000182481.10	ENST00000678388.1	2315	10	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	273.279443648782	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTAGATCATGTAGCTG	4	True	NA	-20	True	GGGGCT	-14	NA	68035712	68046588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771
transcript_61442.known	chr17	+	1963	9	FSM	ENSG00000182481.10	ENST00000677918.1	1963	9	0	0	0	0	multi-exon	FALSE	canonical	3	4203	junction_6	276.50517061169	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATAATCCCAGCTACTCA	4	True	NA	NA	False	NA	NA	NA	68035712	68044968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320
transcript_61443.known	chr17	-	672	3	FSM	ENSG00000265055.2	ENST00000579629.2	672	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTAATGAGTGTGG	-4	True	NA	57	True	ATTAAA	-30	NA	68101496	68096045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68096479_68100551_68100709_68101414
transcript_61445.known	chr17	-	432	2	FSM	ENSG00000265055.2	ENST00000584047.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTTTGTTTATATAC	23	False	NA	1	True	AATAAA	-17	NA	68101469	68096101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68096479_68101414
transcript_61446.nnic	chr17	+	731	5	FSM	ENSG00000237854.4	ENST00000692407.1	1357	5	-25	651	-21	-651	multi-exon	TRUE	canonical	3	29	junction_2	17.5071414000116	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAGGAAAGAAC	96	False	NA	NA	False	NA	NA	NA	68101852	68125897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68101960_68102942_68103059_68114421_68114526_68125389_68125481_68125584
transcript_61455.known	chr17	+	1339	8	FSM	ENSG00000196704.14	ENST00000580753.5	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	228.140754977344	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGAAACTCTTTATC	-36	True	NA	4	True	AATAAA	-1	NA	68248034	68257139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248059_68248643_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_61459.nic	chr17	+	1433	8	NIC	ENSG00000196704.14	novel	1498	8	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_1	253.416330836617	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	286	False	NA	20	True	AATAAA	-17	NA	68248012	68257155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_68248111_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_61462.known	chr17	+	1498	8	FSM	ENSG00000196704.14	ENST00000612294.4	1498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.410496716925	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTACTGGCCTGGTCTGT	277	False	NA	29	True	AATAAA	-26	NA	68248003	68257164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248158_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_61476.known	chr17	+	1378	8	FSM	ENSG00000196704.14	ENST00000392720.6	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	213.972914555243	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTCATCTTACTGG	-28	True	NA	19	True	AATAAA	-16	NA	68248042	68257154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248087_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_61477.known	chr17	+	1932	7	FSM	ENSG00000196704.14	ENST00000359904.8	1932	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_3	37.5972812255827	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	-28	True	NA	20	True	AATAAA	-17	NA	68248042	68257155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_61478.known	chr17	+	1722	6	FSM	ENSG00000196704.14	ENST00000359783.8	1722	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	295.263678768656	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAATAATAAAAACTCTAG	-20	True	NA	-8	True	AATGAA	-8	NA	68248050	68257127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248706_68250187_68250471_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_61479.known	chr17	+	2554	12	FSM	ENSG00000141337.13	ENST00000621439.5	2554	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_6	2.55193979047604	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACACAGAGCAGACATT	-8	True	NA	22	True	AATAAA	-29	NA	68291494	68420814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68291569_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
transcript_61483.known	chr17	-	1886	13	FSM	ENSG00000070540.13	ENST00000589316.5	1886	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	48.6902768071363	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACACTAATAATAAAATCAT	-7	True	NA	-45	True	AATAAA	-29	NA	68457499	68421309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_61484.known	chr17	-	1804	12	FSM	ENSG00000070540.13	ENST00000589459.5	1804	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	63.0569727958916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACTAATAATAAAATCATG	-7	True	NA	-44	True	AATAAA	-30	NA	68457499	68421308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68457341
transcript_61486.known	chr17	-	1908	13	FSM	ENSG00000070540.13	ENST00000262139.10	1908	13	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_5	32.6045327455487	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAGGTTTTTATATAT	-4	True	NA	-16	True	AATAAA	-15	NA	68457496	68421280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433467_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_61488.known	chr17	+	3697	12	FSM	ENSG00000108946.16	ENST00000536854.6	3697	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	651.826537286373	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	-3	True	NA	NA	False	AATAAA	-21	NA	68512449	68532762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512549_68514986_68515120_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_61490.known	chr17	+	3576	11	FSM	ENSG00000108946.16	ENST00000358598.6	3576	11	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_1	473.126251649599	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	2	True	NA	NA	False	AATAAA	-21	NA	68512031	68532762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512143_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_615.nnic	chr1	+	1661	7	NNC	ENSG00000228794.11	novel	1823	7	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	34.7918413169269	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGGTACAATAGCTATT	762	False	NA	12	True	AATAAA	-14	NA	827597	854387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853488_853536
transcript_61500.known	chr17	+	4253	11	FSM	ENSG00000108946.16	ENST00000589228.6	4253	11	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	181.078684554533	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTGGGTTGACAGTCC	-23	True	NA	16	True	AATAAA	-17	NA	68512429	68533431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_61501.known	chr17	+	3551	11	FSM	ENSG00000108946.16	ENST00000392710.8	3551	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	508.55683064924	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAATGAATCAGT	-3	True	NA	NA	False	AATAAA	-18	NA	68512449	68532759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512549_68515393_68515567_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_61502.known	chr17	+	556	2	FSM	ENSG00000108946.16	ENST00000592194.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAATTCTTTGTAACTT	-38	True	NA	NA	False	AATAAA	-8	NA	68512414	68515815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512549_68515393
transcript_61503.known	chr17	+	1209	10	FSM	ENSG00000108946.16	ENST00000588188.6	1209	10	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_9	510.724346418586	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	-10	True	NA	24	True	AATAAA	-25	NA	68515399	68551319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_61507.known	chr17	-	3017	21	FSM	ENSG00000154265.16	ENST00000593153.5	3017	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	5.29032135129805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGCTGGTGAGAGT	-5	True	NA	NA	False	CATAAA	-23	NA	69327182	69273970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_69274129_69277640_69277843_69283952_69284073_69285897_69286038_69286220_69286312_69287612_69287752_69289176_69289297_69289861_69290038_69291215_69291327_69294654_69294714_69297190_69297360_69301138_69301287_69302717_69302907_69304668_69304811_69306724_69306955_69308279_69308369_69309261_69309424_69313091_69313297_69314313_69314431_69325698_69325818_69327051
transcript_61509.known	chr17	-	804	6	FSM	ENSG00000154265.16	ENST00000587607.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	5.95315042645489	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGATAATGGGACT	188	False	NA	NA	False	AATAAA	-5	NA	69327090	69306762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_69306955_69308279_69308369_69309261_69309424_69313091_69313297_69314313_69314431_69327051
transcript_61512.known	chr17	+	1851	12	FSM	ENSG00000108984.15	ENST00000359094.7	1851	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	28.7206551641471	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTCTTCTGACACTTG	93	False	NA	NA	False	AGTAAA	-4	NA	69414833	69542510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517552_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_61516.known	chr17	+	13405	12	FSM	ENSG00000108984.15	ENST00000590474.7	13405	12	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	9.45279704113161	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTACATTAATTG	-14	True	NA	18	True	AATAAA	-20	NA	69414696	69553865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_6152.known	chr1	-	1263	8	FSM	ENSG00000162434.13	ENST00000672751.1	1263	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	44.2617446653013	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGGAAAATAAACACAAGAA	-21	True	NA	-21	True	AATAAA	-16	NA	65067754	64864927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_65067603
transcript_61521.known	chr17	+	1512	12	FSM	ENSG00000108984.15	ENST00000589647.5	1512	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.0027071976633	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAAGCTTCTCAGACTT	24	False	NA	38	True	ATTAAA	-24	NA	69502428	69542019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69502686_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_61528.known	chr17	+	431	2	FSM	ENSG00000108984.15	ENST00000592348.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGAGTCCTCAAGCTTC	NA	False	NA	30	True	ATTAAA	-16	NA	69536065	69542011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69536161_69541675
transcript_6153.known	chr1	-	5092	25	FSM	ENSG00000162434.13	ENST00000342505.5	5092	25	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	14.6765473346651	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCATATGCCTTTTAATA	-21	True	NA	-6	True	AATAAA	-17	NA	64966549	64833228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_64834658_64835395_64835507_64836097_64836216_64837931_64838105_64838464_64838590_64839602_64839796_64841244_64841340_64841450_64841602_64844063_64844216_64844753_64844890_64845512_64845641_64846648_64846737_64847531_64847676_64850803_64850911_64855508_64855699_64857655_64857780_64860104_64860263_64864786_64864973_64866865_64867209_64869310_64869475_64873369_64873524_64879024_64879149_64883276_64883476_64886258_64886342_64966332
transcript_61532.nnic	chr17	+	605	5	NNC	ENSG00000256124.6	novel	1364	5	NA	NA	31	1135	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.6393596310755	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTCTTAATAACATTT	-8	True	NA	NA	False	AATAAA	-19	NA	72030631	72037451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_72030852_72036238_72036316_72036459_72036592_72037044_72037132_72037362
transcript_61539.known	chr17	-	645	4	FSM	ENSG00000228639.8	ENST00000430908.8	645	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTACATGTGTCTT	3664	False	NA	NA	False	AATAAA	-19	NA	72030604	72021850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72021980_72024152_72024305_72025897_72025978_72030320
transcript_61540.nnic	chr17	+	403	3	NNC	ENSG00000256124.6	novel	3684	3	NA	NA	24	1135	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTCTTAATAACATTT	-15	True	NA	NA	False	AATAAA	-19	NA	72030624	72037451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_72030852_72037044_72037132_72037362
transcript_61541.known	chr17	+	3684	3	FSM	ENSG00000256124.6	ENST00000472655.4	3684	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTATTCTGTGGTTTTT	NA	False	NA	NA	False	AATAGA	-15	NA	72030560	72041310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_72030852_72037044_72037132_72038004
transcript_61544.known	chr17	+	1439	3	FSM	ENSG00000256124.6	ENST00000538810.6	1439	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCTTCCAAAGGACCCAA	NA	False	NA	NA	False	AAAAAG	-29	NA	72030580	72039595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_72030852_72037044_72037132_72038514
transcript_61549.known	chr17	-	4476	5	FSM	ENSG00000234899.11	ENST00000662263.1	4476	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTTTCCTTTATAAATT	3365	False	NA	NA	False	NA	NA	NA	72120805	72067098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72071232_72081920_72082042_72083905_72084029_72084989_72085046_72120762
transcript_61550.known	chr17	-	482	4	FSM	ENSG00000234899.11	ENST00000657467.1	482	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTGGAAATCCTTTC	3360	False	NA	NA	False	ATTAAA	-23	NA	72120810	72071041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72071232_72081920_72082042_72083905_72084029_72120762
transcript_61556.known	chr17	-	2752	10	FSM	ENSG00000133195.12	ENST00000542342.6	2752	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.137271518771	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTTACGTTCAG	-7	True	NA	-18	True	AATAAA	-16	NA	73092688	72645949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_61557.known	chr17	-	2737	10	FSM	ENSG00000133195.12	ENST00000255559.8	2732	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	43	junction_5	12.7956396894305	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTACGTTCAGT	-12	True	NA	-17	True	AATAAA	-17	NA	73092693	72645948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_61580.nic	chr17	-	1054	7	NIC	ENSG00000133195.12	novel	1004	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	33.3866240681304	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTTGTGTCTGGT	7040	False	NA	NA	False	TTTAAA	-16	NA	73092710	72837799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_72838121_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_61582.known	chr17	-	1004	7	FSM	ENSG00000133195.12	ENST00000579732.5	1004	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	25.8677190507569	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTTGTGTCTGGT	0	True	NA	NA	False	TTTAAA	-16	NA	73092681	72837799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72838121_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_61583.known	chr17	+	3014	14	FSM	ENSG00000166685.13	ENST00000299886.9	3014	14	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_3	13.3274641914787	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCTCTGCTCATCTGAT	4	True	NA	20	True	AATAAA	-25	NA	73193054	73208507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73193385_73196506_73196752_73196899_73197082_73197225_73197397_73199864_73200022_73200565_73200777_73201108_73201901_73202999_73203147_73203631_73203794_73205552_73205681_73206153_73206263_73206707_73206818_73207180_73207257_73208313
transcript_61586.known	chr17	+	3618	6	FSM	ENSG00000141219.16	ENST00000535032.7	3618	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	64.2638311960935	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCCCTGAGCTGATTA	1	True	NA	113	True	AATAAA	-22	NA	73232432	73248959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_61589.known	chr17	+	2075	6	FSM	ENSG00000141219.16	ENST00000426147.6	2075	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	79.3710274596468	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATACAGGAAGTAAACG	-15	True	NA	NA	False	AATAAA	-26	NA	73232661	73245344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73245167
transcript_61590.known	chr17	+	3645	6	FSM	ENSG00000141219.16	ENST00000359042.6	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	40.3910881259715	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAAAAGTACTCCC	11	False	NA	101	True	AATAAA	-10	NA	73232621	73248947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_61596.known	chr17	+	3449	5	FSM	ENSG00000141219.16	ENST00000268942.12	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	73.9746578227977	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGACTCTTTTATACT	26	False	NA	28	True	AATAAA	-13	NA	73232636	73248874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_616.nnic	chr1	+	1593	7	NNC	ENSG00000228794.11	novel	1823	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.7918413169269	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGGTACAATAGCTATT	-5	True	NA	12	True	AATAAA	-14	NA	827660	854387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853523_853576
transcript_6160.known	chr1	+	6887	6	FSM	ENSG00000162433.15	ENST00000545314.5	6887	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	315.347807983503	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	-43	True	NA	39	True	AATAAA	-27	NA	65147548	65232145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65147666_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_61604.known	chr17	+	2163	5	FSM	ENSG00000141219.16	ENST00000255557.8	2163	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	94.9404418569874	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATGATACAGGAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	73232232	73245339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242895_73243004_73245167
transcript_61610.known	chr17	+	7685	2	FSM	ENSG00000180616.9	ENST00000357585.4	7685	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTGCGTATGTCTT	-9	True	NA	NA	False	ATTAAA	-21	NA	73165009	73176633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73165289_73169227
transcript_61612.known	chr17	-	512	2	FSM	ENSG00000133193.13	ENST00000581110.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCCTACAGCACCGAG	NA	False	NA	NA	False	NA	NA	NA	73232394	73209565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_73209769_73232085
transcript_61615.known	chr17	-	2798	3	FSM	ENSG00000133193.13	ENST00000403627.7	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	20.5	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	-1	True	ATTAAA	-28	NA	73232367	73207352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_73209769_73227164_73227265_73232085
transcript_61616.known	chr17	-	2865	4	FSM	ENSG00000133193.13	ENST00000405159.8	2876	4	23	-12	-4	0	multi-exon	FALSE	canonical	3	112	junction_2	156.610628275634	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	-1	True	ATTAAA	-28	NA	73232371	73207352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_73209769_73212677_73212741_73227164_73227265_73232085
transcript_61617.known	chr17	-	3098	2	FSM	ENSG00000179604.10	ENST00000335793.4	3098	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGTGTCTGTCTCTGC	-1	True	NA	-2	True	ATTAAA	-18	NA	73312001	73283623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_73286613_73311892
transcript_61628.known	chr17	+	344	5	FSM	ENSG00000172809.13	ENST00000584577.5	344	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	5699.43179185434	51729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTTCGTCTTTGCG	9	True	NA	13	True	ATTAAA	-15	NA	74203692	74209878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209812
transcript_61629.known	chr17	+	532	4	FSM	ENSG00000172809.13	ENST00000533498.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	10545	junction_3	1626.41575933776	11559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	20	False	NA	31	True	ATTAAA	-33	NA	74203703	74209896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203959_74204129_74204191_74209186_74209310_74209803
transcript_6163.known	chr1	+	6998	6	FSM	ENSG00000162433.15	ENST00000395334.6	6998	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	328.221510568701	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	50	False	NA	39	True	AATAAA	-27	NA	65147829	65232145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65148058_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_61630.known	chr17	+	431	5	FSM	ENSG00000172809.13	ENST00000439590.6	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	830	junction_1	5378.79602583143	22206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCGTCTTTGCGGA	NA	False	NA	15	True	ATTAAA	-17	NA	74203581	74209880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203711_74203917_74203959_74204129_74204191_74209186_74209310_74209803
transcript_61631.known	chr17	+	576	3	FSM	ENSG00000172809.13	ENST00000529123.2	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	9748	junction_1	2255	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCGAGCACGGCACACT	-9	True	NA	NA	False	AATAAA	-22	NA	74203674	74204593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203746_74203917_74203959_74204129
transcript_61632.known	chr17	+	169	3	FSM	ENSG00000172809.13	ENST00000528433.2	169	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	7065.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTTGCTCCGAAGG	20	False	NA	15	True	NA	NA	NA	74203703	74204190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203771_74203917_74203959_74204129
transcript_61636.known	chr17	-	1727	3	FSM	ENSG00000204347.4	ENST00000375366.4	1727	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	1	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATGATTGAACCACTCAG	17	True	NA	-6	True	AATAAA	-21	NA	74361868	74356415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74357732_74359968_74360246_74361734
transcript_61638.nic	chr17	+	1834	4	NIC	ENSG00000170412.18	novel	2317	4	NA	NA	316	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	39.7520090337862	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	142	False	NA	27	True	AATAAA	-20	NA	74432448	74447429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_74432524_74439744_74440828_74443817_74443913_74446848
transcript_61641.known	chr17	+	393	3	FSM	ENSG00000170412.18	ENST00000582873.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGGACTCTCCAGGCTC	20	False	NA	NA	False	NA	NA	NA	74443076	74447088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74443135_74443817_74443913_74446848
transcript_61642.known	chr17	+	1813	4	FSM	ENSG00000170412.18	ENST00000392627.7	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	65.6167322834318	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	-15	True	NA	27	True	AATAAA	-20	NA	74432087	74447429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74432142_74439744_74440828_74443817_74443913_74446848
transcript_61645.known	chr17	+	1785	7	FSM	ENSG00000167851.15	ENST00000648095.1	1785	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.62995563967658	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	-1	True	NA	21	True	AGTAAA	-16	NA	74466398	74484794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74466656_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_61646.known	chr17	+	2613	9	FSM	ENSG00000172794.20	ENST00000392613.10	2613	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4.26468052730799	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	4	True	NA	21	True	ATTAAA	-21	NA	74737255	74747335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_61647.known	chr17	+	2528	8	FSM	ENSG00000172794.20	ENST00000392612.7	2528	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.23834069384271	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	7	True	NA	21	True	ATTAAA	-21	NA	74737229	74747335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74737366_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_61649.known	chr17	+	1993	6	FSM	ENSG00000109062.12	ENST00000262613.10	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_1	30.8259630830896	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGCCTCCGTGTGTT	-1	True	NA	37	True	NA	NA	NA	74748627	74769353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74749288_74762011_74762174_74763366_74763521_74766935_74766977_74768146_74768237_74768467
transcript_61660.known	chr17	-	1993	6	FSM	ENSG00000109065.12	ENST00000583834.5	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_4	22.2387049982682	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCTCAGTATAAAACAAA	24	True	NA	-53	True	NA	NA	NA	74776323	74770580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74771859_74771959_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_61661.known	chr17	-	418	2	FSM	ENSG00000109065.12	ENST00000579837.1	418	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAGCCAGGCATGGT	11	True	NA	NA	False	NA	NA	NA	74776336	74775359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74775708_74776266
transcript_61665.nnic	chr17	+	1018	10	NNC	ENSG00000109066.14	novel	4703	10	NA	NA	-22	3200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	56.8189674468693	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGCTCCAGCTCTTTC	7500	False	NA	NA	False	NA	NA	NA	74776476	74798789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74798261_74798326_74798639
transcript_61666.known	chr17	+	4676	10	FSM	ENSG00000109066.14	ENST00000582330.2	4676	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	43.3319088084942	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTGTTTCCCACATCAC	10	True	NA	27	True	AATAAA	-12	NA	74776519	74839750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74776578_74777266_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74835926
transcript_61667.known	chr17	+	1740	10	FSM	ENSG00000109066.14	ENST00000582773.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	41.7692071587032	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTCCCACATCACT	-10	True	NA	28	True	AATAAA	-13	NA	74776499	74839751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74838886
transcript_61675.nic	chr17	+	1002	5	ISM	ENSG00000109066.14	ENST00000582773.5	1740	10	-23	48967	-22	-4805	5prime_fragment	FALSE	canonical	3	108	junction_1	17.1081121109256	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGACTGTGTTAAA	7500	False	NA	NA	False	NA	NA	NA	74776476	74790784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199
transcript_61679.nic	chr17	+	795	3	ISM	ENSG00000109066.14	ENST00000578764.5	534	6	-23	4808	-22	-4808	5prime_fragment	FALSE	canonical	3	13	junction_2	47.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGACTGTGTT	7500	False	NA	NA	False	NA	NA	NA	74776476	74790781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_74776578_74777263_74777376_74790199
transcript_61684.known	chr17	-	1766	12	FSM	ENSG00000161513.12	ENST00000582944.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	52.0374944289815	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGGTTGGGAACATG	1	True	NA	-50	True	NA	NA	NA	74872985	74862543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866545_74866783_74866877_74872035_74872134_74872865
transcript_61686.known	chr17	-	2482	12	FSM	ENSG00000161513.12	ENST00000578473.5	2482	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	62.7598071095646	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGGTTGATGGGGGA	11	False	74873017	-5	True	AATAAA	-15	NA	74873006	74862498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872242
transcript_61687.known	chr17	-	1827	12	FSM	ENSG00000161513.12	ENST00000581530.5	1827	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	53.4930288190097	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCATGGTTGATGGGG	56	False	NA	-7	True	AATAAA	-13	NA	74872961	74862500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864950_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_61690.known	chr17	-	1705	11	FSM	ENSG00000161513.12	ENST00000420580.6	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	65.2476053200422	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGGTTGATGGGGGAC	12	True	NA	-4	True	AATAAA	-16	NA	74872974	74862497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866783_74866880_74872035_74872134_74872865
transcript_61697.known	chr17	-	1762	11	FSM	ENSG00000161513.12	ENST00000583917.5	1762	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	66.1528533020307	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACAGCTGCAACCAAG	2	True	NA	-24	True	NA	NA	NA	74873015	74862517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864346_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872865
transcript_61699.known	chr17	-	2174	6	FSM	ENSG00000172782.13	ENST00000612771.5	2174	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.72046505340853	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATAACTTTGAATGT	14	True	NA	NA	False	AATAAA	-40	NA	74893633	74877301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74878478_74879403_74879584_74881067_74881256_74882529_74882711_74892522_74892690_74893351
transcript_6170.nnic	chr1	+	1469	5	NIC	ENSG00000162433.15	novel	6887	6	NA	NA	27	138	combination_of_known_splicesites	FALSE	canonical	3	55	junction_1	384.092762233292	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGTCTTGGGAACC	-16	True	NA	52	True	NA	NA	NA	65147575	65227029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_65147666_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_61700.known	chr17	-	3298	19	FSM	ENSG00000167861.16	ENST00000425042.7	3298	19	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	16.9779268463496	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTCTGTGGTTGAGG	-2	True	NA	-5	True	AATAAA	-16	NA	74972759	74950741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_61702.nic	chr17	-	1750	12	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-4	7227	0	0	5prime_fragment	FALSE	canonical	3	80	junction_2	12.1824965889794	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTATCTATCATCAT	-6	True	NA	NA	False	ATTAAA	-27	NA	74972763	74957968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_61703.nic	chr17	-	1459	6	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-4	10507	0	348	5prime_fragment	FALSE	canonical	3	85	junction_3	12.6901536633722	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCATATAACCCAATAT	-6	True	NA	NA	False	AATAAA	-22	NA	74972763	74961248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_61705.nic	chr17	-	1111	6	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-4	10855	0	0	5prime_fragment	FALSE	canonical	3	85	junction_3	12.6901536633722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTAAAAAAGTTAAAAA	-6	True	NA	NA	False	AATAGA	-24	NA	74972763	74961596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_61708.known	chr17	+	593	6	FSM	ENSG00000167862.10	ENST00000584208.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	100.511889843938	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGCTGAGACAAAAGAG	-5	True	NA	NA	False	AAAACA	-9	NA	75012669	75020939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020466_75020658_75020920
transcript_61709.known	chr17	+	894	6	FSM	ENSG00000167862.10	ENST00000301585.10	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_4	20.448960853794	2472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTTCCCTTCTCATTC	-5	True	NA	11	True	AATAAA	-13	NA	75012669	75021261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020487_75020658_75020920
transcript_61726.known	chr17	-	609	6	FSM	ENSG00000167863.12	ENST00000301587.9	609	6	0	0	0	0	multi-exon	FALSE	canonical	3	2482	junction_5	245.353133258982	40293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-1	True	NA	-18	True	ATTAAA	-16	NA	75046969	75038862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75039064_75039208_75039272_75040091_75040164_75042180_75042278_75042528_75042660_75046924
transcript_61727.known	chr17	-	553	5	FSM	ENSG00000167863.12	ENST00000344546.8	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1242.25822597397	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-17	False	NA	-18	True	ATTAAA	-16	NA	75046985	75038862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75039064_75039208_75039272_75042180_75042278_75042528_75042660_75046924
transcript_61728.known	chr17	+	1940	7	FSM	ENSG00000170190.16	ENST00000329783.9	1940	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	19.3857049280019	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	-11	True	NA	NA	False	AATAAA	-22	NA	75087953	75106162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_6173.known	chr1	+	6845	5	FSM	ENSG00000162433.15	ENST00000327299.8	6845	5	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	115.970901522753	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	13	True	NA	39	True	AATAAA	-27	NA	65148202	65232145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_61731.nnic	chr17	+	1137	6	NIC	ENSG00000170190.16	novel	1940	7	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	32.932658562588	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	-18	True	NA	NA	False	AATAAA	-22	NA	75087946	75106162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75103969_75104181_75105879
transcript_61734.known	chr17	-	653	5	FSM	ENSG00000125458.7	ENST00000582170.1	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	228.111266709911	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCTGGAGCTAAAGG	15	True	NA	NA	False	NA	NA	NA	75131744	75130472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130638_75130752_75130868_75131044_75131106_75131180_75131282_75131533
transcript_61737.known	chr17	-	921	4	FSM	ENSG00000125458.7	ENST00000582744.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	215.146978185198	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTCGGGACCTT	4484	False	NA	-48	True	AATACA	-4	NA	75131473	75130270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180
transcript_61738.known	chr17	-	860	4	FSM	ENSG00000125458.7	ENST00000582160.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	14.1970262926979	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGACCCTTTATTTGG	4511	False	NA	-2	True	AATAAA	-20	NA	75131446	75130224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180
transcript_61739.nnic	chr17	+	625	3	NNC	ENSG00000125449.7	novel	2151	3	NA	NA	0	-1982	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCCTCATTTCATAACA	8	True	NA	NA	False	AATAAA	-18	NA	75109968	75112844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_75110380_75110462_75110607_75112774
transcript_61740.known	chr17	+	1204	3	FSM	ENSG00000125449.7	ENST00000582136.5	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	21	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCTCTTGTGTTTAT	17	True	NA	12	True	AATGAA	-27	NA	75109977	75114826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75110380_75110462_75110607_75114168
transcript_61741.known	chr17	+	445	3	FSM	ENSG00000125449.7	ENST00000584947.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTGTTTATTATG	138	False	NA	16	True	AATGAA	-31	NA	75110180	75114830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75110380_75110462_75110607_75114728
transcript_61742.known	chr17	+	2151	3	FSM	ENSG00000125449.7	ENST00000245543.6	2151	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCCATGCCAGCCA	8	True	NA	78	True	ATTAAA	-21	NA	75109968	75130272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75110380_75110462_75110607_75128676
transcript_61743.nnic	chr17	-	862	3	NIC	ENSG00000125458.7	novel	901	5	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	255.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	6	True	NA	-5	True	AATAAA	-17	NA	75131512	75130227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_75130643_75130752_75130868_75131180
transcript_61744.nic	chr17	+	920	2	ISM	ENSG00000125449.7	ENST00000582136.5	1204	3	-10	3856	-1	-3856	5prime_fragment	FALSE	canonical	3	52	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCCGCACACAGTG	7	True	NA	NA	False	NA	NA	NA	75109967	75110970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_75110380_75110462
transcript_61750.known	chr17	-	1633	6	FSM	ENSG00000189159.16	ENST00000304834.11	1633	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	901.406678475371	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTACTTCACAATCCT	NA	False	NA	-64	True	NA	NA	NA	75154675	75135306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75149090_75149186_75154341
transcript_61766.known	chr17	-	490	4	FSM	ENSG00000188612.12	ENST00000578238.2	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	1971.36314936307	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAAGATTACATTCTCA	-2	True	NA	NA	False	NA	NA	NA	75182563	75168297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182381
transcript_6177.known	chr1	+	928	5	FSM	ENSG00000162433.15	ENST00000474968.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	331.089395027989	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTCAAATGGTGTGTAA	6	True	NA	NA	False	AAGAAA	-14	NA	65149001	65226439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65149141_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_61772.known	chr17	-	1434	5	FSM	ENSG00000189159.16	ENST00000409753.8	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_4	50.5123747214482	18422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTACTGTGTCTTCT	0	True	NA	-5	True	AGTAAA	-20	NA	75154512	75135247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75154341
transcript_61773.known	chr17	-	3166	4	FSM	ENSG00000188612.12	ENST00000420826.7	3166	4	0	0	0	0	multi-exon	FALSE	canonical	3	3479	junction_3	432.653055769478	12179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTATTATGTGTTA	4	True	NA	-7	True	AATATA	-17	NA	75182959	75165585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182813
transcript_61774.known	chr17	-	809	3	FSM	ENSG00000188612.12	ENST00000314523.7	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	1606.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACGTAGCTGTTACA	7	True	NA	47	True	NA	NA	NA	75182956	75167867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75168402_75181056_75181189_75182813
transcript_61779.known	chr17	+	2133	19	FSM	ENSG00000125450.11	ENST00000245544.9	2133	19	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_7	55.3016698785672	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTAGAGTCCACCCAG	-27	True	NA	36	True	AATAAA	-19	NA	75205678	75235758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_61788.known	chr17	+	1890	18	FSM	ENSG00000125450.11	ENST00000579298.5	1890	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	116.951029292585	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTTTGTATGGCA	14	True	NA	-31	True	NA	NA	NA	75205719	75235691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_61791.known	chr17	+	2233	17	FSM	ENSG00000125450.11	ENST00000581104.5	2233	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	118.266647876737	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATAGATTTTTTTA	14	True	NA	-12	True	NA	NA	NA	75205719	75235710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75235202_75235577
transcript_6180.known	chr1	+	867	5	FSM	ENSG00000162433.15	ENST00000479060.1	867	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	407.383725742696	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAGTGTGGATTTCAAA	21	False	NA	NA	False	AAGAAA	-4	NA	65165931	65226429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65166020_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_61804.known	chr17	+	2010	18	FSM	ENSG00000125450.11	ENST00000579324.5	2010	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	119.331007174818	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTTAGAGTCCACCCA	1	True	NA	35	True	AATAAA	-18	NA	75205706	75235757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75205795_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_61805.known	chr17	-	3871	17	FSM	ENSG00000125447.18	ENST00000537686.6	3871	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	45.7506403643709	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	4	True	NA	-5	True	AATAAA	-16	NA	75261606	75236598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
transcript_61807.known	chr17	-	3766	16	FSM	ENSG00000125447.18	ENST00000538886.5	3766	16	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	74.3001719752758	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	10	True	NA	-5	True	AATAAA	-16	NA	75261600	75236598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75246508_75246585_75246711_75246797_75261547
transcript_61821.known	chr17	+	864	5	FSM	ENSG00000125445.11	ENST00000583407.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	578.656417919995	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGGCTGGAACTTGCT	76	False	NA	49	True	AAGAAA	-39	NA	75261960	75266084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75261984_75262462_75262689_75262803_75262868_75263339_75263508_75265701
transcript_61828.known	chr17	+	1638	4	FSM	ENSG00000125445.11	ENST00000579002.5	1638	4	0	0	0	0	multi-exon	FALSE	canonical	3	1291	junction_2	39.6063967897443	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGTCCTTATACAAAA	27	False	NA	17	True	NA	NA	NA	75261911	75266330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75262689_75262803_75262868_75263339_75263508_75265701
transcript_61829.known	chr17	+	1717	4	FSM	ENSG00000125445.11	ENST00000579761.5	1717	4	0	0	0	0	multi-exon	TRUE	canonical	3	1291	junction_3	52.6708859069431	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTCTTGTGTTCTCC	-12	True	NA	NA	False	NA	NA	NA	75261673	75264490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339
transcript_61830.known	chr17	+	1204	5	FSM	ENSG00000125445.11	ENST00000245539.11	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	1291	junction_3	48.442620697068	6229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCTCTGCCTCCACCC	-6	True	NA	27	True	TATAAA	-19	NA	75261878	75266376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701
transcript_61831.known	chr17	-	1319	6	FSM	ENSG00000125457.15	ENST00000325102.13	1319	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	34.1561121909388	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	4	True	NA	NA	False	AATAAA	-19	NA	75271231	75266227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75271143
transcript_61832.known	chr17	-	1358	7	FSM	ENSG00000125457.15	ENST00000245551.9	1358	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	69.3821943216622	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGCTTCCTTTATAT	-5	True	NA	NA	False	AATAAA	-14	NA	75271173	75266232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269449_75270113_75270246_75271143
transcript_61833.known	chr17	-	1419	7	FSM	ENSG00000125457.15	ENST00000579297.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	62.8667020148363	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTCTGATACTAAAAC	8	True	NA	NA	False	NA	NA	NA	75271227	75266246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
transcript_61837.known	chr17	-	1630	8	FSM	ENSG00000125454.12	ENST00000416858.7	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	55.8452672797885	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-16	True	NA	-16	True	ATTAAA	-13	NA	75289433	75272991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288501_75288592_75289353
transcript_61840.nic	chr17	-	1359	6	NIC	ENSG00000125454.12	novel	1630	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	53.794423502813	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-5	True	NA	-16	True	ATTAAA	-13	NA	75289422	75272991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75289353
transcript_61847.known	chr17	-	1486	7	FSM	ENSG00000125454.12	ENST00000375261.8	1486	7	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_3	65.0862675394912	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCATCTCCCCTGGCACA	-32	True	NA	-5	True	ATTAAA	-24	NA	75289449	75272980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75286303_75286460_75286632_75286803_75288501_75288592_75289353
transcript_61848.known	chr17	-	1496	7	FSM	ENSG00000125454.12	ENST00000442286.6	1496	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	33.304987948087	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTATCTTACTCCATC	27	True	NA	-17	True	ATTAAA	-12	NA	75289390	75272992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75289353
transcript_61849.known	chr17	-	1554	8	FSM	ENSG00000125454.12	ENST00000580994.5	1554	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	37.3592597051158	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAACCTATTTAATAGAC	6	True	NA	-54	True	NA	NA	NA	75289411	75273029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_61850.known	chr17	-	3273	6	FSM	ENSG00000177885.15	ENST00000316804.10	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_5	105.915815627318	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	5	True	NA	-6	True	AATAAA	-19	NA	75405678	75318075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550_75393766_75405488
transcript_61852.known	chr17	-	3182	5	FSM	ENSG00000177885.15	ENST00000392564.5	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	67.3772031179686	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-22	True	NA	-6	True	AATAAA	-19	NA	75393864	75318075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550
transcript_61856.nic	chr17	-	1170	4	ISM	ENSG00000177885.15	ENST00000582582.1	584	5	181	-614	12	614	3prime_fragment	FALSE	canonical	3	1037	junction_2	14.1656862405839	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGATTTGTTG	-10	True	NA	NA	False	NA	NA	NA	75393852	75321180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_75321828_75325897_75326021_75332699_75332798_75393550
transcript_61859.known	chr17	-	1612	10	FSM	ENSG00000177303.10	ENST00000581870.1	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	8.20568908339411	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAGTGGAGCTGTGAT	10004	False	NA	NA	False	AATAAA	-43	NA	75515440	75505318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514209_75515400
transcript_61865.known	chr17	-	4969	20	FSM	ENSG00000177303.10	ENST00000321617.8	4969	20	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	11.71688177629	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGCTGTGTGTTTGCCTC	-12	True	NA	0	True	AATGAA	-18	NA	75515537	75500260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75501171_75501467_75501691_75501778_75503255_75503388_75503528_75503658_75503761_75503851_75503963_75504214_75504307_75504419_75504481_75504571_75504694_75504811_75505074_75505556_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514209_75515400
transcript_61868.nic	chr17	+	1644	3	ISM	ENSG00000182173.14	ENST00000579449.2	2632	9	5686	-12	-869	0	3prime_fragment	FALSE	canonical	3	398	junction_1	9	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTTCTGTATGTACTG	5281	False	NA	13	True	ATTAAA	-16	NA	75522282	75524735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_75523336_75523662_75523780_75524261
transcript_61870.nic	chr17	+	1420	10	NIC	ENSG00000073350.14	novel	3527	22	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	164.062619782437	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCACGTACCTG	8033	False	NA	9	True	AATAAA	-12	NA	75525034	75564721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_75525175_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
transcript_61872.known	chr17	+	1374	10	FSM	ENSG00000073350.14	ENST00000375227.8	1374	10	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_7	42.5670132530337	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCACGTACCTG	15	True	NA	9	True	AATAAA	-12	NA	75525731	75564721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
transcript_61874.known	chr17	-	3669	20	FSM	ENSG00000108469.15	ENST00000317905.10	3669	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	24.3662042870313	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCTCCAGGGAGTT	-6	True	NA	-16	True	AATAAA	-36	NA	75667154	75626853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75627523_75627622_75627693_75628217_75628443_75628671_75628763_75628933_75629476_75629707_75629843_75630183_75630278_75630618_75630693_75630778_75630838_75630973_75631011_75631149_75631250_75631449_75631669_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_61877.known	chr17	-	1749	9	FSM	ENSG00000108469.15	ENST00000340830.9	1749	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	40.8044115262063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTGTGTGTTTTTAT	-6	True	NA	NA	False	AAAAAG	-21	NA	75667189	75650358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75650719_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_61881.known	chr17	+	866	3	FSM	ENSG00000259120.3	ENST00000556126.2	866	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTGAGAGCTCATTTT	-7	True	NA	10	True	AATAAA	-21	NA	75646242	75647975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75646372_75646654_75646787_75647370
transcript_61883.known	chr17	+	1140	2	FSM	ENSG00000259120.3	ENST00000579469.2	1140	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTGTGAGAGCTCATTT	1	True	NA	9	True	AATAAA	-20	NA	75646250	75647974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75646787_75647370
transcript_61884.known	chr17	+	709	3	FSM	ENSG00000266714.10	ENST00000583140.5	709	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTCTTGCTCCTTTGG	4051	False	NA	15	True	AATAAA	-21	NA	75619878	75620921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75620021_75620245_75620358_75620466
transcript_61885.known	chr17	-	1922	9	FSM	ENSG00000108469.15	ENST00000584999.1	1922	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	40.8044115262063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGGCTGTGTGTTTT	10	True	NA	NA	False	AAAAAG	-18	NA	75667173	75650361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75650719_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666621_75666900
transcript_61892.known	chr17	+	2500	11	FSM	ENSG00000161526.15	ENST00000584667.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_5	41.8168626274138	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTTGTTGGCTAAAT	-12	True	NA	21	True	TATAAA	-18	NA	75667337	75708059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_61899.known	chr17	+	2409	10	FSM	ENSG00000161526.15	ENST00000582022.5	2409	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	234.109713648732	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTTGGCTAAATCCA	21	True	NA	24	True	TATAAA	-21	NA	75667370	75708062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_619.nnic	chr1	+	1657	7	NNC	ENSG00000228794.11	novel	1932	8	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	34.7918413169269	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAGGTACAATAGCTA	762	False	NA	10	True	AATAAA	-12	NA	827597	854385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390_853586_853636
transcript_61900.known	chr17	+	2439	10	FSM	ENSG00000161526.15	ENST00000355423.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	204.285626718941	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTGTTTTTTGTTGGC	-4	True	NA	16	True	TATAAA	-13	NA	75667345	75708054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_61904.known	chr17	+	1097	6	FSM	ENSG00000161526.15	ENST00000577292.5	1097	6	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_5	53.353162980277	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTGGAGGGCCATCAGG	1	True	NA	NA	False	NA	NA	NA	75667350	75703158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479
transcript_61907.known	chr17	+	678	4	FSM	ENSG00000161526.15	ENST00000578909.1	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_3	50.3388517946129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAGGCATTATATGTAT	1118	False	NA	NA	False	AATAAA	-17	NA	75668515	75700259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75668626_75671815_75671864_75693439_75693483_75699782
transcript_61908.known	chr17	+	1558	11	FSM	ENSG00000161526.15	ENST00000580322.5	1558	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	234.403583590354	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGGCATCTCAGATG	24	True	NA	22	True	ATTAAA	-15	NA	75667373	75706756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75705610_75706093_75706339
transcript_61909.known	chr17	+	652	4	FSM	ENSG00000161526.15	ENST00000578756.5	652	4	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_3	31.1555238547945	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGGCATCTCAGATGC	NA	False	NA	23	True	ATTAAA	-16	NA	75703769	75706757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75703860_75704755_75704815_75706007_75706093_75706339
transcript_61910.known	chr17	+	574	6	FSM	ENSG00000161526.15	ENST00000578354.5	574	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	387.434949378602	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTATTGGGGGATCCTG	-4	True	NA	NA	False	AATACA	-35	NA	75667345	75693482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75690670_75690773_75691393_75691532_75693439
transcript_61911.known	chr17	-	1445	9	FSM	ENSG00000108479.13	ENST00000225614.6	1445	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	95.0867202873251	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTAGTAGAAACGGTT	2535	False	NA	NA	False	NA	NA	NA	75765236	75751593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75751738_75758033_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_61912.known	chr17	-	1251	8	FSM	ENSG00000108479.13	ENST00000592997.6	1251	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	97.9714660667345	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	2635	False	NA	31	True	NA	NA	NA	75765136	75757893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762796_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_61913.known	chr17	-	1397	8	FSM	ENSG00000108479.13	ENST00000588479.6	1397	8	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	16.1637033541961	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	-19	True	NA	31	True	NA	NA	NA	75765192	75757893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_61922.known	chr17	+	1312	4	FSM	ENSG00000132478.10	ENST00000586527.1	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	7.76029781788188	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTTATTTCAG	14	True	NA	27	True	ATTAAA	-27	NA	75784854	75794198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75784985_75791759_75792020_75792312_75792479_75793442
transcript_6193.nnic	chr1	+	2205	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	29	-1742	29	1742	multi-exon	FALSE	canonical	3	27	junction_2	99.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAACTTTAAAATTTTTT	10	False	NA	17	True	AATAAA	-21	NA	65420615	65433806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_61937.known	chr17	+	984	3	FSM	ENSG00000132478.10	ENST00000587501.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	51.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGAAGTAAGAGTACTT	8	True	NA	4	True	ATTAAA	-22	NA	75784848	75794124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75784985_75792312_75792479_75793442
transcript_61941.known	chr17	-	576	4	FSM	ENSG00000132475.10	ENST00000589599.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7353.07640832507	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	-3	True	NA	-88	True	NA	NA	NA	75779780	75778573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779646
transcript_61942.known	chr17	-	795	4	FSM	ENSG00000132475.10	ENST00000592643.5	795	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6795.12222112303	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTGTTTAACAATTGG	5785	False	NA	-22	True	AATAAA	-17	NA	75779758	75778249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75778724_75778882_75778964_75779046_75779185_75779656
transcript_61943.known	chr17	-	551	3	FSM	ENSG00000132475.10	ENST00000587560.5	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	15429	junction_2	168.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTCTGTAAAATACTT	6257	False	NA	-81	True	NA	NA	NA	75779286	75778566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75778724_75778809_75778964_75779046
transcript_61944.known	chr17	+	3890	16	FSM	ENSG00000132478.10	ENST00000589666.6	3890	16	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	7.17278808336681	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAGCTTGTTTACATGG	-35	True	NA	13	True	AATAAA	-14	NA	75784805	75825799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75784985_75809759_75809970_75812111_75812289_75812454_75812586_75813077_75813214_75813760_75813879_75815168_75815254_75816769_75816913_75817325_75817527_75818102_75818169_75818641_75818817_75819683_75819786_75819919_75820109_75822476_75822659_75823264_75823523_75824261
transcript_61947.nic	chr17	-	1791	9	NIC	ENSG00000092929.12	novel	4080	32	NA	NA	-68	0	intron_retention	FALSE	canonical	3	20	junction_8	11.9687092035858	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTGGCCTACAGTG	9570	False	NA	-16	True	AATAAA	-25	NA	75833337	75827224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_75828087_75828786_75828984_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
transcript_61951.nnic	chr17	+	1299	3	Antisense	novelGene_ENSG00000092929.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTTCTCTGTTTTAAAT	NA	False	NA	NA	False	AATACA	-19	NA	75830586	75833433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_75830747_75831248_75831316_75832361
transcript_61954.known	chr17	-	695	3	FSM	ENSG00000092929.12	ENST00000590856.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCACTGCACTCCAGCCT	2358	False	NA	NA	False	NA	NA	NA	75830661	75829661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75830152_75830361_75830483_75830577
transcript_61955.known	chr17	-	1374	9	FSM	ENSG00000132471.12	ENST00000588373.5	1374	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	225.705525796335	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCAGACCCTGCTCAC	13	True	NA	NA	False	NA	NA	NA	75855309	75846322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75852655_75852821_75855238
transcript_61959.known	chr17	-	1895	8	FSM	ENSG00000132471.12	ENST00000585462.5	1895	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	182.863504353629	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGGACCCTTTCTGG	0	True	NA	-16	True	AGTAAA	-6	NA	75855322	75845708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855179
transcript_61961.known	chr17	-	1907	6	FSM	ENSG00000132481.7	ENST00000587339.2	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	12.7027556065603	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	416	False	NA	NA	False	AATAAA	-16	NA	75878196	75874163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877850
transcript_61962.known	chr17	-	2269	6	FSM	ENSG00000132481.7	ENST00000254816.6	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	4.83321838943783	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	2	True	NA	NA	False	AATAAA	-16	NA	75878581	75874163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877873
transcript_61966.nnic	chr17	-	646	2	NNC	ENSG00000141569.12	novel	3384	6	NA	NA	1496	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATACGTGTAATATACATA	8970	False	NA	-3	True	AATAAA	-15	NA	75890653	75888962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_75889132_75890176
transcript_61969.known	chr17	-	4825	29	FSM	ENSG00000188878.20	ENST00000586717.5	4825	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	12.4668949377042	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTAGCTGCGCCTGGAT	19	True	NA	NA	False	ATTAAA	-20	NA	75941038	75909573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75910807_75912191_75912308_75913701_75913820_75913912_75914051_75914121_75914296_75914746_75914933_75915016_75915140_75917731_75917851_75917930_75918071_75918161_75918270_75919667_75919875_75920006_75920108_75920273_75920430_75921243_75921303_75921471_75921561_75921944_75922047_75923185_75923642_75925346_75925447_75926029_75926164_75926287_75926427_75926757_75926878_75927454_75927533_75928075_75928194_75929996_75930048_75931228_75931290_75932994_75933089_75937565_75937594_75938146_75938233_75940847
transcript_61972.known	chr17	-	1358	9	FSM	ENSG00000204316.13	ENST00000309352.4	1358	9	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_1	26.0612259880459	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGCTCACACCTGTA	13	True	NA	-11	True	AATAAA	-18	NA	75904884	75898643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
transcript_61988.known	chr17	-	727	4	FSM	ENSG00000204316.13	ENST00000493383.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	486.020804310085	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAGGAAAAAGAGGCT	9993	False	NA	NA	False	AATAGA	-4	NA	75904858	75901554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75901917_75902019_75902155_75904539_75904720_75904808
transcript_61990.known	chr17	-	535	3	FSM	ENSG00000204316.13	ENST00000410030.1	535	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	542	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCGCCTCAAATACTCTGT	3	True	NA	NA	False	NA	NA	NA	75905093	75904243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75904314_75904539_75904720_75904808
transcript_61993.known	chr17	-	7317	14	FSM	ENSG00000161533.12	ENST00000293217.10	7317	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	20.1896335225568	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTAATCTTTTTGTG	-14	True	NA	0	True	AATAAA	-39	NA	75979166	75941506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75960214_75960376_75978533_75978694_75978964
transcript_61994.known	chr17	-	2215	14	FSM	ENSG00000161533.12	ENST00000301608.8	2215	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	18.7446244759814	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAAGTGCAATTAACA	18	True	NA	-23	True	ATTAAA	-15	NA	75979134	75946576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75973624_75973786_75978533_75978694_75978964
transcript_62.known	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00145_+_0_1000
transcript_6200.known	chr1	+	4541	4	FSM	ENSG00000213625.9	ENST00000371065.9	4541	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	20.8859335970941	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	-16	True	NA	NA	False	AATAAA	-21	NA	65420667	65436007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65420741_65425302_65425379_65429861_65430049_65431802
transcript_62003.nic	chr17	-	1078	6	NIC	ENSG00000161533.12	novel	7317	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	40.0569594452699	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTGCCAAAAAAGAAAAAAA	-14	True	NA	NA	False	NA	NA	NA	75979166	75953248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75978533_75978694_75978964
transcript_62006.known	chr17	-	308	2	FSM	ENSG00000161533.12	ENST00000592329.1	308	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATCACCGTGCTTGGT	368	False	NA	NA	False	NA	NA	NA	75979045	75978466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75978694_75978964
transcript_62012.known	chr17	+	3287	10	FSM	ENSG00000261408.7	ENST00000569284.1	3287	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	79.7585863638858	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTGTTCTGCTCA	15	True	NA	19	True	AATAAA	-22	NA	75979259	76005999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_62016.known	chr17	+	1570	8	FSM	ENSG00000250506.9	ENST00000448471.3	1620	8	51	-1	51	0	multi-exon	FALSE	canonical	1	1	junction_1	38.0595666323843	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTGTTCTGCTCA	NA	False	NA	19	True	AATAAA	-22	NA	76000905	76005999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76000968_76001411_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_62021.known	chr17	+	862	4	FSM	ENSG00000257949.7	ENST00000588202.5	862	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	122.565175405668	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGGCCATGGAGGGTT	-4	True	NA	-52	True	NA	NA	NA	75979240	76000521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991578_76000140
transcript_62022.known	chr17	+	974	4	FSM	ENSG00000257949.7	ENST00000397640.6	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_3	2.35702260395516	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCGTGGTGCAGCGC	-5	True	NA	13	True	AATAAA	-24	NA	75979239	76000586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140
transcript_62026.known	chr17	+	3897	9	FSM	ENSG00000261408.7	ENST00000567351.5	3897	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	82.4832369333309	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGATTGTTCTGCTC	-14	True	NA	18	True	AATAAA	-21	NA	75979230	76005998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76003399_76005297
transcript_62027.known	chr17	-	2124	20	FSM	ENSG00000182473.22	ENST00000634349.1	2124	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	243.491113672908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	7	True	NA	-109	True	NA	NA	NA	76103692	76083647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_62029.known	chr17	-	4782	19	FSM	ENSG00000182473.22	ENST00000589210.6	4782	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_12	205.853845131821	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGGGAGAAGTGGTC	-33	True	NA	-35	True	AATAAA	-20	NA	76103787	76081015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_6203.known	chr1	+	377	3	FSM	ENSG00000213625.9	ENST00000497874.5	377	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	99.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTCATTTGTTTATG	-16	True	NA	9	True	AATAAA	-18	NA	65420667	65428009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65420741_65425302_65425379_65427781
transcript_62032.known	chr17	-	4596	18	FSM	ENSG00000182473.22	ENST00000332065.9	4596	18	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_12	59.1032174371132	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAGGGAGAAGTGGT	4	True	NA	-36	True	AATAAA	-19	NA	76103695	76081016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_62037.known	chr17	-	1941	15	FSM	ENSG00000167881.15	ENST00000592704.5	1941	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	228.349579838118	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCTTAAGCAGCGTGTC	9	True	NA	2	True	NA	NA	NA	76072497	76039550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76072344
transcript_62039.known	chr17	-	2958	6	FSM	ENSG00000182473.22	ENST00000405068.3	2958	6	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_2	67.5857973245859	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11	True	NA	NA	False	NA	NA	NA	76103743	76092314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_6204.known	chr1	+	492	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	99.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGGAGATGAGTTTTA	3	True	NA	NA	False	AAGAAA	-8	NA	65420586	65432064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_62043.known	chr17	-	718	4	FSM	ENSG00000182473.22	ENST00000406660.4	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_2	21.3541565040626	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTTGTTGTTGTTG	20	True	NA	NA	False	ATTAAA	-37	NA	76103734	76101011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76101377_76101678_76101864_76103360_76103427_76103632
transcript_62044.known	chr17	-	2831	16	FSM	ENSG00000167881.15	ENST00000307877.7	2831	16	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_5	90.8234918215913	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACACTTAACGATTCCC	-11	True	NA	-6	True	AATAAA	-18	NA	76072517	76038784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76070377_76070445_76072307
transcript_62048.known	chr17	+	660	2	FSM	ENSG00000185262.9	ENST00000589240.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGAGGGCAGGGGGTTT	357	False	NA	-90	True	NA	NA	NA	76265702	76270586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76265970_76270193
transcript_62052.known	chr17	-	3435	10	FSM	ENSG00000161542.17	ENST00000446526.8	3435	10	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	20.932578424699	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTCTCAATTGTTAAC	-23	True	NA	NA	False	NA	NA	NA	76353916	76309477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_62053.known	chr17	-	1678	10	FSM	ENSG00000161542.17	ENST00000324684.8	1678	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	152.255632991945	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTAGTCTTTTCATTAG	-1	False	NA	-43	True	AATAAA	-13	NA	76354198	76310933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76354116
transcript_62060.nic	chr17	+	1427	4	ISM	ENSG00000176170.14	ENST00000392496.3	1779	5	680	2	-51	0	3prime_fragment	FALSE	canonical	3	16	junction_3	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTCGTCCTGTCCTGG	565	False	NA	2	True	AATAAA	-13	NA	76385971	76387855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_76386138_76386220_76386316_76386392_76386509_76386805
transcript_62066.known	chr17	-	3511	19	FSM	ENSG00000129667.13	ENST00000675367.1	3511	19	0	0	0	0	multi-exon	TRUE	canonical	2	32	junction_12	15.8819915099142	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-31	True	NA	-16	True	ATTAAA	-18	NA	76501423	76470895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487910_76501352
transcript_62070.nic	chr17	+	730	3	NIC	ENSG00000214140.11	novel	504	2	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACCTCAATATTCTAA	2198	False	NA	17	True	AATAAA	-27	NA	76540020	76553574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_76540216_76540504_76540574_76553108
transcript_62072.known	chr17	+	504	2	FSM	ENSG00000214140.11	ENST00000587813.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACCTCAATATTCTAA	452	False	NA	17	True	AATAAA	-27	NA	76540535	76553574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76540574_76553108
transcript_62074.known	chr17	-	1904	9	FSM	ENSG00000070731.11	ENST00000225276.10	1904	9	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_5	6.32331993497087	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGCGTCAGTAAATTTG	-18	True	NA	-2	True	AATAAA	-15	NA	76585860	76565376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76566272_76567452_76567553_76568712_76568797_76570564_76570669_76572636_76572776_76573194_76573364_76574364_76574540_76578755_76578817_76585683
transcript_62078.known	chr17	+	3059	6	FSM	ENSG00000163597.16	ENST00000667091.1	3059	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	744.260868244462	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTCAGCTGAGTTCA	-5	True	NA	11	True	AATAAA	-9	NA	76557765	76565338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76557858_76557969_76558280_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_62083.known	chr17	+	2407	3	FSM	ENSG00000163597.16	ENST00000493536.7	2437	3	3	27	0	-17	multi-exon	FALSE	canonical	3	39	junction_2	603	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	-2	True	NA	-6	True	NA	NA	NA	76557768	76565321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76557858_76561287_76561403_76563118
transcript_62084.known	chr17	+	1830	4	FSM	ENSG00000163597.16	ENST00000653677.2	2536	4	0	706	0	-637	multi-exon	FALSE	canonical	3	39	junction_3	339.72930400541	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAACTGTAAGTCCAAT	-5	True	NA	-18	True	NA	NA	NA	76557765	76564642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76557858_76558944_76559044_76561287_76561403_76563118
transcript_62085.known	chr17	+	989	5	FSM	ENSG00000163597.16	ENST00000586942.7	993	5	3	1	0	-1	multi-exon	FALSE	canonical	3	50	junction_1	762.380810356609	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTGTCTCCGCAGA	-2	True	NA	13	True	GATAAA	-4	NA	76557768	76563581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76557858_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_62086.known	chr17	+	3607	3	FSM	ENSG00000163597.16	ENST00000448136.5	3607	3	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_1	585	1947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGTTCAAATTTACTGA	7	True	NA	21	True	AATAAA	-19	NA	76557777	76565348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76559044_76561287_76561399_76563118
transcript_62087.known	chr17	-	1950	5	FSM	ENSG00000182534.14	ENST00000375036.6	1950	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	146.499786689265	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTGTTTTTTCAGT	-11	True	NA	-4	True	AATAAA	-21	NA	76711004	76679568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76680880_76683846_76683928_76685071_76685166_76688112_76688177_76710604
transcript_62088.known	chr17	-	5661	4	FSM	ENSG00000182534.14	ENST00000355797.7	5661	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	160.74202935138	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGCAAGTTTACTTT	38	True	NA	NA	False	AATAAA	-24	NA	76710955	76672550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76677703_76685071_76685166_76688112_76688177_76710604
transcript_62089.known	chr17	-	1833	4	FSM	ENSG00000182534.14	ENST00000449428.7	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	54.1869192907497	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTTTTTTCAGTTTG	28	True	NA	-1	True	AATAAA	-24	NA	76710965	76679565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76680880_76685071_76685166_76688112_76688177_76710604
transcript_6209.known	chr1	+	3982	10	FSM	ENSG00000184588.18	ENST00000371045.9	3982	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	5.01356185452377	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGGCCCACTTATTT	191	False	NA	8	True	AATAAA	-20	NA	66332003	66374579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66332621_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
transcript_62090.known	chr17	+	1717	1	FSM	ENSG00000261335.1	ENST00000565271.1	1717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTTAGTATAATTAC	NA	False	NA	NA	False	AATAAA	-16	NA	76671941	76673658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76671900_76673700
transcript_62092.known	chr17	-	1898	7	FSM	ENSG00000070495.15	ENST00000542934.5	1898	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	59.7717882170733	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTCCTTTGAGAA	-5	True	NA	-23	True	AATAAA	-24	NA	76726784	76718445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76718861_76720359_76720499_76721262_76721357_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_62094.known	chr17	-	1621	6	FSM	ENSG00000070495.15	ENST00000397625.9	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	12.7216351150314	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAAATGTTTTCCTTT	7	True	NA	-28	True	AATAAA	-19	NA	76726606	76718450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76718861_76720359_76720499_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_62097.known	chr17	-	1330	5	FSM	ENSG00000070495.15	ENST00000585429.1	1330	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.0557757951846	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAAGAAAATCCTTTACAT	2	True	NA	-77	True	GATAAA	-39	NA	76726503	76718499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76718861_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_62099.known	chr17	+	2538	14	FSM	ENSG00000092931.12	ENST00000336509.8	2538	14	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	22.5645687597527	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGATAATTTTTTAAAA	18	True	NA	NA	False	AAAAAG	-12	NA	76737700	76779286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76737884_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_6210.known	chr1	+	2037	10	FSM	ENSG00000184588.18	ENST00000480109.2	2037	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	13.3869293171814	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCAGCCCACCATGGGGG	-6	True	NA	NA	False	NA	NA	NA	66354381	66372738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66354895_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
transcript_62100.known	chr17	+	1891	14	FSM	ENSG00000092931.12	ENST00000590514.5	1891	14	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.8378975201599	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATGTTTTGCCATGT	48	True	NA	19	True	TATAAA	-16	NA	76738070	76778727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76738166_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_62105.nic	chr17	+	875	5	NIC	ENSG00000181038.14	novel	1059	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	76.7772752837713	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	719	False	NA	NA	False	ATTAAA	-17	NA	76726796	76733880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_76726880_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_62106.known	chr17	+	1184	5	FSM	ENSG00000181038.14	ENST00000588783.5	1184	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	71.175838597097	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACCTCAAGAAAAGTGC	-10	True	NA	NA	False	ATTAAA	-32	NA	76726842	76733936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_62107.known	chr17	+	1171	5	FSM	ENSG00000181038.14	ENST00000615984.4	1171	5	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_1	65.807959245064	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGATTGTTCCTTAGTC	752	False	NA	NA	False	ATTAAA	-16	NA	76726829	76733879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727214_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_62109.known	chr17	+	617	4	FSM	ENSG00000181038.14	ENST00000589977.5	617	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	77.154966715623	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCTGACTGGTCACTT	752	False	NA	NA	False	TTTAAA	-19	NA	76726829	76733516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76726880_76729689_76729795_76732977_76733216_76733292
transcript_62112.nic	chr17	+	756	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	86.8766686490427	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	733	False	NA	NA	False	ATTAAA	-17	NA	76726810	76733880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_76726880_76732977_76733216_76733292_76733382_76733520
transcript_62119.known	chr17	+	585	3	FSM	ENSG00000181038.14	ENST00000591571.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	89	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAAAGAAGATATAGCAG	-14	True	NA	NA	False	NA	NA	NA	76726838	76733598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76726880_76732977_76733216_76733292
transcript_62128.nic	chr17	+	420	2	ISM	ENSG00000092931.12	ENST00000588031.5	757	8	-100	5935	-75	4	5prime_fragment	FALSE	canonical	3	35	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCGCGCTTTAATTGCATC	-27	True	NA	5	True	AATAAA	-17	NA	76737995	76738531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_76738166_76738281
transcript_62129.known	chr17	+	1006	4	FSM	ENSG00000181038.14	ENST00000590964.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_1	67.5886249469703	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGATTGTTCCTTAGT	1	True	NA	NA	False	ATTAAA	-15	NA	76726853	76733878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727179_76732977_76733216_76733292_76733378_76733520
transcript_62130.known	chr17	+	1128	5	FSM	ENSG00000181038.14	ENST00000341249.11	1128	5	0	0	0	0	multi-exon	FALSE	canonical	1	44	junction_1	60.2634839683203	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	-14	True	NA	NA	False	ATTAAA	-17	NA	76726838	76733880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_62131.known	chr17	+	446	2	FSM	ENSG00000092931.12	ENST00000591864.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGCAGTCCAGAAATGA	41	False	NA	-38	True	NA	NA	NA	76736852	76738488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76737092_76738281
transcript_62133.known	chr17	-	623	3	FSM	ENSG00000267568.6	ENST00000563583.1	623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATGTATTAAATATTTG	97	False	NA	NA	False	NA	NA	NA	76969097	76962891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76963050_76963892_76964144_76968883
transcript_62137.nnic	chr17	-	917	3	NNC	ENSG00000267568.6	novel	610	3	NA	NA	-167	629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGTTTATTCATTAATT	NA	False	NA	NA	False	NA	NA	NA	76969323	76962262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_76962489_76963892_76964144_76968883
transcript_62139.known	chr17	+	2908	18	FSM	ENSG00000129657.16	ENST00000443798.8	2908	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_17	45.3752520082224	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	34	True	NA	NA	False	AATAAA	-21	NA	77141031	77217101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917_77214020_77216548
transcript_62140.known	chr17	+	5500	17	FSM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	23.5981990838284	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	-29	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
transcript_62142.known	chr17	+	2712	17	FSM	ENSG00000129657.16	ENST00000585618.5	2712	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	47.7604700563133	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATTGATGCAAAAAATT	9	True	NA	33	True	ATTAAA	-17	NA	77140931	77214329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77141055_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
transcript_62143.nic	chr17	+	813	6	ISM	ENSG00000129657.16	ENST00000436233.9	5500	17	-65	23552	-28	0	5prime_fragment	FALSE	canonical	3	135	junction_4	22.5335305711289	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTATCTTGGGATTT	-19	True	NA	NA	False	ATTAAA	-4	NA	77140903	77193549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420
transcript_62145.known	chr17	+	437	3	FSM	ENSG00000129657.16	ENST00000588696.5	437	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACCTCAGGGTAAT	72	False	NA	NA	False	AATAAA	-17	NA	77141069	77143860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77141108_77142645_77142751_77143566
transcript_62147.known	chr17	+	1338	4	FSM	ENSG00000234912.12	ENST00000566583.5	1338	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.131126469709	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTACTGACTCGTTCTC	31	True	NA	13	True	AATAAA	-13	NA	77088748	77094983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77094069
transcript_62148.known	chr17	+	1849	4	FSM	ENSG00000234912.12	ENST00000650557.1	1849	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.6607133363712	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGGGAGGCCAAGGC	-52	True	NA	NA	False	NA	NA	NA	77088665	77099506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77098164
transcript_62149.known	chr17	+	592	4	FSM	ENSG00000234912.12	ENST00000648984.1	592	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.131126469709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTCAGGCGTGGTGGTG	-6	True	NA	NA	False	AATACA	-4	NA	77088711	77098348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77098217
transcript_62150.known	chr17	+	603	4	FSM	ENSG00000234912.12	ENST00000561633.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	15.8394724940223	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTATTGAATTAAAATAA	31	True	NA	-31	True	AAAACA	-9	NA	77088748	77099196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77099017
transcript_62153.known	chr17	+	2185	3	FSM	ENSG00000234912.12	ENST00000434411.6	2185	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	1.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTCGTTCTCCTGTGTG	NA	False	NA	20	True	AATAAA	-20	NA	77088630	77094990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243
transcript_62156.known	chr17	+	1187	3	FSM	ENSG00000234912.12	ENST00000648740.1	1187	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTTTTTTTTAAC	49	True	NA	NA	False	AATAAA	-14	NA	77088766	77099902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77099017
transcript_62159.known	chr17	+	849	2	FSM	ENSG00000234912.12	ENST00000366365.3	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATGAAACCCCATTTC	60	True	NA	NA	False	NA	NA	NA	77088777	77089829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152
transcript_62162.known	chr17	+	500	2	FSM	ENSG00000234912.12	ENST00000648926.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTGGCCTGACATCATG	NA	False	NA	NA	False	AATAAA	-11	NA	77088630	77089600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088683_77089152
transcript_62163.known	chr17	+	1234	3	FSM	ENSG00000234912.12	ENST00000565256.1	1234	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTACTGACTCGTTCTC	31	True	NA	13	True	AATAAA	-13	NA	77088748	77094983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77094069
transcript_62164.known	chr17	+	806	3	FSM	ENSG00000234912.12	ENST00000564509.5	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTATTGAATTAAAATAA	31	True	NA	-31	True	AAAACA	-9	NA	77088748	77099196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77089272_77093243_77093348_77099017
transcript_62166.known	chr17	+	3733	12	FSM	ENSG00000184640.20	ENST00000427177.6	3733	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	215.076884196565	2486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	28	True	NA	33	True	AATAAA	-22	NA	77281498	77500593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77281555_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_62167.known	chr17	+	2160	11	FSM	ENSG00000184640.20	ENST00000591198.5	2160	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	199.267558824812	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCACTTGCAGAGGAGCCCA	-20	True	NA	NA	False	NA	NA	NA	77281450	77499029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77281555_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_62168.known	chr17	+	3026	10	FSM	ENSG00000184640.20	ENST00000541152.6	3026	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	195.80943116544	2473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	16	False	NA	34	True	AATAAA	-23	NA	77450736	77500594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77450787_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_62169.known	chr17	+	1691	10	FSM	ENSG00000184640.20	ENST00000591088.5	1691	10	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	145.644247787478	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCGCACTTGCAGAGGA	494	False	NA	NA	False	NA	NA	NA	77451243	77499024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77451529_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_62170.nic	chr17	+	3137	10	NIC	ENSG00000184640.20	novel	817	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	184.679903256057	2502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	4130	False	NA	33	True	AATAAA	-22	NA	77466398	77500593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_77466561_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_62174.known	chr17	+	2451	2	FSM	ENSG00000267506.6	ENST00000590398.6	2452	2	0	1	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTGGCGCCCCCTGCTT	9	True	NA	NA	False	AATAAA	-18	NA	77546940	77563243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77547093_77560944
transcript_62176.known	chr17	-	8387	20	FSM	ENSG00000141524.17	ENST00000590602.6	8387	20	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_19	50.244885077531	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGATGCATGTTCTTCA	-5	True	NA	2	True	AATAAA	-22	NA	78128755	78107396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_62182.known	chr17	-	1681	12	FSM	ENSG00000141524.17	ENST00000306591.11	1681	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.5451923073286	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGCTTGTCCCTTGGG	5675	False	NA	-19	True	ATTAAA	-11	NA	78128630	78112924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78113212_78113547_78113622_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_62185.known	chr17	+	1495	4	FSM	ENSG00000108639.8	ENST00000225777.8	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_3	82.4311160235556	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGTCATTGGTTGAG	-4	True	NA	29	True	AATAAA	-15	NA	78168580	78172720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78168716_78170816_78171055_78171509_78171650_78171738
transcript_62189.known	chr17	+	2239	4	FSM	ENSG00000108639.8	ENST00000590201.1	2239	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	462.713974526621	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	9	True	NA	NA	False	NA	NA	NA	78169157	78173527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78169230_78170816_78171055_78171509_78171650_78171738
transcript_62190.known	chr17	+	2125	3	FSM	ENSG00000108639.8	ENST00000589168.1	2125	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	519	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	33	False	NA	NA	False	NA	NA	NA	78168617	78173527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78168716_78170816_78171055_78171738
transcript_62193.known	chr17	+	1553	3	FSM	ENSG00000108639.8	ENST00000588282.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_2	84	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	26	False	NA	28	True	AATAAA	-14	NA	78168610	78172719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78168716_78170816_78171055_78171509
transcript_62200.known	chr17	-	1431	7	FSM	ENSG00000167900.12	ENST00000301634.12	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	125.493691740528	5043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTGGACGCACATT	-3	True	NA	NA	False	NA	NA	NA	78187052	78174090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_62201.known	chr17	-	642	7	FSM	ENSG00000167900.12	ENST00000590862.5	642	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	403.128046930776	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATGCTGCCCAGCCACT	348	False	NA	NA	False	NA	NA	NA	78187036	78174701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78174789_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_62207.nic	chr17	+	1290	7	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_5	37.1707770522311	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	-3	True	NA	24	True	AATAAA	-17	NA	78187357	78207701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78204827_78204901_78205945_78206051_78206910
transcript_62208.known	chr17	+	778	7	FSM	ENSG00000183077.16	ENST00000588199.5	778	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	40.1265359692173	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCTGCCTCTTAGACTC	1	True	NA	NA	False	NA	NA	NA	78187361	78207187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205439_78205519_78205945_78206051_78206910
transcript_62211.nic	chr17	+	1266	6	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	17.1510932596147	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	2194	False	NA	24	True	AATAAA	-17	NA	78187308	78207701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205945_78206051_78206910
transcript_62216.nnic	chr17	+	1171	5	NIC	ENSG00000183077.16	novel	1686	11	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	37.3187285421141	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTCGTTCATTTACGT	2185	False	NA	25	True	AATAAA	-18	NA	78187299	78207702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78206910
transcript_62218.known	chr17	+	647	5	FSM	ENSG00000183077.16	ENST00000588800.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	38.555155297314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGACGCTCAAAAGTA	1	True	NA	NA	False	NA	NA	NA	78187361	78207240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78187434_78190969_78191061_78202702_78202752_78205945_78206051_78206910
transcript_6222.known	chr1	+	2262	5	FSM	ENSG00000152760.10	ENST00000282670.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.06201920231798	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTCTATTGTAACAATG	0	True	NA	NA	False	AATAAA	-30	NA	66752458	66779047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66752585_66754655_66754778_66770386_66770479_66776278_66776404_66777250
transcript_62223.nnic	chr17	+	554	3	NNC	ENSG00000183077.16	novel	631	6	NA	NA	0	-2435	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	53	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTTGGTAGGGGCAAG	-3	True	NA	NA	False	AATAAA	-15	NA	78187357	78195125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78187434_78190969_78191061_78194738
transcript_62224.known	chr17	+	550	3	FSM	ENSG00000183077.16	ENST00000586731.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	52	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	40	False	NA	4	True	AATAAA	-17	NA	78187400	78197560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78187434_78190969_78191061_78197134
transcript_62225.known	chr17	+	582	3	FSM	ENSG00000183077.16	ENST00000591952.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGCAGTGGCGTGAT	1	True	NA	NA	False	NA	NA	NA	78187361	78207329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78187434_78190969_78191061_78206910
transcript_62228.known	chr17	+	2574	4	FSM	ENSG00000089685.15	ENST00000350051.8	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	1139	junction_3	267.253936671972	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	-9	True	NA	26	True	AATAAA	-21	NA	78214252	78225635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78223464
transcript_62229.known	chr17	+	568	2	FSM	ENSG00000089685.15	ENST00000590449.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	1758	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAACAGTTTAATTGA	18	True	NA	NA	False	NA	NA	NA	78214279	78215099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78214428_78214679
transcript_62234.nic	chr17	+	619	2	ISM	ENSG00000267737.1	ENST00000586321.1	799	3	-7	3282	-7	159	5prime_fragment	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGCTTCTGAGAGATG	4	True	NA	NA	False	AAAAAG	-1	NA	78315721	78344516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_78315789_78343964
transcript_62245.nnic	chr17	+	698	5	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3323	702	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.71036092035419	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	5538	False	NA	13	True	AATAAA	-17	NA	78365993	78374613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78368727_78368894_78369789_78369878_78374362
transcript_62248.nnic	chr17	+	920	4	NNC	ENSG00000266970.2	novel	874	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	6.94422221866655	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	3713	False	NA	-13	True	CATAAA	-7	NA	78360397	78364905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78360774_78361765_78361822_78362672_78362752_78364496
transcript_62251.nnic	chr17	+	831	4	NNC	ENSG00000266970.2	novel	490	2	NA	NA	857	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	23.6220236220354	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	862	False	NA	-13	True	CATAAA	-7	NA	78361317	78364905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78361605_78361765_78361822_78362672_78362752_78364496
transcript_62256.nnic	chr17	+	688	4	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3245	702	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	4.10960933531265	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	5460	False	NA	13	True	AATAAA	-17	NA	78365915	78374613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78368727_78368894_78374362
transcript_62257.nnic	chr17	+	650	4	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3323	702	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.43650214343336	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	5538	False	NA	13	True	AATAAA	-17	NA	78365993	78374613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78369671_78369878_78374362
transcript_6226.nnic	chr1	+	842	4	NNC	ENSG00000152760.10	novel	758	3	NA	NA	-304	92	intron_retention	FALSE	canonical	1	1	junction_3	6.64997911442	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGAGTGATTTGATGTT	NA	False	NA	NA	False	AATATA	-13	NA	66752154	66770599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_66752585_66754655_66754778_66755643_66755721_66770386
transcript_62263.nic	chr17	+	845	3	FSM	ENSG00000266970.2	ENST00000687996.1	874	3	0	29	0	0	multi-exon	FALSE	canonical	3	12	junction_1	25	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	-4	True	NA	-13	True	CATAAA	-7	NA	78360416	78364905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78360774_78362672_78362752_78364496
transcript_62269.nnic	chr17	+	931	3	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3245	4451	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	2	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGAGTGGTGGCATGTG	5460	False	NA	NA	False	AAAAAG	-1	NA	78365915	78369387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78368727
transcript_6227.nnic	chr1	+	898	4	NNC	ENSG00000152760.10	novel	492	5	NA	NA	-304	95	intron_retention	FALSE	canonical	1	2	junction_3	6.37704215656966	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTGATTTGATGTTGCT	NA	False	NA	NA	False	AATATA	-16	NA	66752154	66770602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_66752585_66754655_66754778_66755643_66755774_66770386
transcript_62272.nnic	chr17	+	468	3	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3323	702	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	5538	False	NA	13	True	AATAAA	-17	NA	78365993	78374613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78374338
transcript_62273.nnic	chr17	+	522	3	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3245	702	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	3.5	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	5460	False	NA	13	True	AATAAA	-17	NA	78365915	78374613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78374362
transcript_62274.nnic	chr17	+	560	2	Antisense	novelGene_ENSG00000243870.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	9113	False	NA	13	True	AATAAA	-17	NA	78369568	78374613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_78369878_78374362
transcript_62276.known	chr17	+	490	2	FSM	ENSG00000266970.2	ENST00000587575.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	2215	False	NA	-13	True	CATAAA	-7	NA	78362670	78364905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78362752_78364496
transcript_62282.known	chr17	+	2297	10	FSM	ENSG00000087157.19	ENST00000262764.11	2297	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	43.6348484585429	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	-5	True	NA	14	True	AATAAA	-18	NA	78378648	78424659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_62289.nic	chr17	+	1168	3	NIC	ENSG00000267432.6	novel	2710	4	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	1	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAACAGGCCAACA	7008	False	NA	NA	False	AATGAA	-6	NA	78484818	78490625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78485163_78489374_78489575_78490001
transcript_62291.known	chr17	+	513	3	FSM	ENSG00000267432.6	ENST00000588565.5	513	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCATCCCTTCCTCTCT	9	True	NA	NA	False	NA	NA	NA	78484881	78490105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78485091_78489374_78489575_78490001
transcript_62294.known	chr17	-	3286	13	FSM	ENSG00000108669.17	ENST00000591455.5	3286	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	12.1541031023364	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	22	True	NA	-1	True	AATAAA	-21	NA	78782272	78674047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_62297.known	chr17	-	3187	17	ISM	ENSG00000055483.20	ENST00000312010.10	5234	20	23	5578	8	924	5prime_fragment	FALSE	canonical	3	125	junction_2	23.52251248804	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGAGACACAGCGGGCAG	573	False	78840893	NA	False	AAAAAG	-18	NA	78840864	78802460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_78802536_78803384_78803979_78806155_78806287_78806958_78807637_78812859_78813002_78813772_78813874_78814411_78814553_78818666_78818779_78819929_78820013_78820990_78821062_78821936_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_62298.nic	chr17	-	1528	7	ISM	ENSG00000055483.20	ENST00000588086.6	2923	16	-15	18050	-15	1687	5prime_fragment	FALSE	canonical	3	140	junction_2	22.9685775692696	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	-21	True	NA	NA	False	NA	NA	NA	78840831	78821434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_78822005_78827244_78827348_78828896_78829008_78835279_78835502_78836110_78836373_78838586_78838751_78840735
transcript_6230.known	chr1	+	758	3	FSM	ENSG00000152760.10	ENST00000525663.5	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACGTTTATCCATTACC	0	True	NA	NA	False	NA	NA	NA	66752458	66770896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66752585_66754655_66754778_66770386
transcript_62301.known	chr17	-	602	4	FSM	ENSG00000055483.20	ENST00000588130.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	72.866697163763	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGGTGCTTCCTTGT	6869	False	NA	1	True	AATACA	-24	NA	78799722	78787380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78787659_78798399_78798552_78798907_78799024_78799666
transcript_62302.known	chr17	-	2479	3	ISM	ENSG00000055483.20	ENST00000592231.6	5895	21	41830	1	6	0	3prime_fragment	FALSE	canonical	3	91	junction_1	33.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGTCTTTGTTGGT	7607	False	NA	-5	True	AATAAA	-17	NA	78798984	78795652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_78797903_78798399_78798552_78798907
transcript_62303.known	chr17	-	406	2	FSM	ENSG00000055483.20	ENST00000592326.1	406	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTCTTTGTTGGTT	9530	False	NA	-4	True	AATAAA	-18	NA	78797061	78795651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78795843_78796846
transcript_62304.known	chr17	-	3652	5	FSM	ENSG00000035862.12	ENST00000262768.11	3652	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	4.41588043316392	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCTCTCTCCGTGTGG	-1	True	NA	-9	True	AATAAA	-19	NA	78925387	78852976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78855865_78857521_78857647_78870897_78871007_78873818_78873920_78924958
transcript_62308.known	chr17	-	2202	6	FSM	ENSG00000108679.13	ENST00000262776.8	2202	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	36.1020775025482	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTGTACAGAAAGT	19	True	NA	-15	True	ATTAAA	-19	NA	78979923	78971254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78972705_78972969_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_62309.known	chr17	-	1961	5	FSM	ENSG00000108679.13	ENST00000591778.5	1961	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	166.459454522716	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGTTGGGTCCACACC	24	True	NA	2	True	ATTAAA	-36	NA	78979918	78971237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78972705_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_6231.known	chr1	-	1520	6	FSM	ENSG00000152763.17	ENST00000371022.3	1520	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.74355957741627	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTACAAGCAAAGTTATA	-18	True	NA	NA	False	NA	NA	NA	66924846	66870804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_66871510_66874780_66874938_66891153_66891267_66893228_66893414_66905200_66905376_66924661
transcript_62311.known	chr17	-	936	5	FSM	ENSG00000108679.13	ENST00000585407.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	39.8748040747538	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCACTCAGGTGGCTG	7	True	NA	NA	False	NA	NA	NA	78979935	78972797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_62315.known	chr17	-	3287	5	FSM	ENSG00000171302.17	ENST00000392446.10	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	33.8775368053818	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGTCTCCCGGTCTG	-12	True	NA	-10	True	AATAAA	-18	NA	79009764	78991715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
transcript_62317.known	chr17	-	3534	4	FSM	ENSG00000171302.17	ENST00000302345.6	3534	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	8.5764535535124	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTGTCTCCCGGTCT	NA	False	NA	-11	True	AATAAA	-17	NA	79009817	78991716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997964_79009663
transcript_62318.known	chr17	+	2886	4	FSM	ENSG00000173918.15	ENST00000579760.6	2886	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.10960933531265	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTCGTCAGTTTGCT	7	True	NA	6	True	ATTAAA	-22	NA	79024168	79049788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_79024495_79043954_79044124_79046554_79046695_79047537
transcript_62319.known	chr17	+	2624	3	FSM	ENSG00000173918.15	ENST00000311661.4	2624	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	9	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGCCTCGTCAGTTTGC	6	True	NA	5	True	ATTAAA	-21	NA	79024260	79049787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_79024495_79046554_79046695_79047537
transcript_6232.nic	chr1	-	1032	5	NIC	ENSG00000152763.17	novel	1520	6	NA	NA	-100	-441	combination_of_known_junctions	TRUE	canonical	1	3	junction_2	0.433012701892219	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGTTGGACACTGTGTT	427	False	NA	NA	False	AATAAA	-22	NA	66924956	66871245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_66871510_66891153_66891267_66893228_66893414_66905200_66905376_66924661
transcript_62324.nic	chr17	-	1140	11	NIC	ENSG00000167281.20	novel	1143	11	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	27.1014759745664	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	282	False	NA	25	True	AAAACA	-41	NA	79183441	79090799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291_79097425_79097691_79097746_79101583_79101645_79104072_79104127_79106650_79106789_79115493_79115749_79183263
transcript_62331.nic	chr17	-	576	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	908	-16	126	0	3prime_fragment	FALSE	canonical	3	76	junction_1	11.0538454847171	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	NA	False	NA	25	True	AAAACA	-41	NA	79097600	79090799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_62332.nic	chr17	-	698	5	ISM	ENSG00000167281.20	ENST00000648001.1	2461	11	17999	1433	145	0	3prime_fragment	FALSE	canonical	3	17	junction_4	35.1238878827501	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	NA	False	NA	25	True	AAAACA	-41	NA	79097581	79090799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096834_79097291
transcript_62334.nic	chr17	-	1185	5	ISM	ENSG00000167281.20	ENST00000582894.5	611	6	126	-433	126	0	3prime_fragment	FALSE	canonical	3	19	junction_1	35.1745646739231	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCGACGTAGTCAC	NA	False	NA	-20	True	ATTAAA	-15	NA	79097600	79091946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_79092642_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_62335.nic	chr17	-	1245	5	NIC	ENSG00000167281.20	novel	877	4	NA	NA	207	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	42.511763078	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCGACGTAGTCAC	NA	False	NA	-20	True	ATTAAA	-15	NA	79097519	79091946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_79092642_79094450_79094530_79095512_79095575_79096652_79096834_79097291
transcript_62339.nnic	chr17	+	1164	3	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	7	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAACGTGTGTGTTTGGC	NA	False	NA	9	True	AAAAAG	-3	NA	79183443	79186282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_79183693_79184419_79184578_79185525
transcript_6234.known	chr1	-	194	2	FSM	ENSG00000152763.17	ENST00000474506.1	194	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTCCAGTGCCTTT	687	False	NA	NA	False	AATAAA	-33	NA	66924696	66921242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_66921402_66924661
transcript_62342.known	chr17	-	260	2	FSM	ENSG00000167281.20	ENST00000580508.1	260	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCCCAGTACCCCCCTCC	251	False	NA	NA	False	NA	NA	NA	79183472	79115697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_79115749_79183263
transcript_62343.known	chr17	+	4237	2	FSM	ENSG00000267719.1	ENST00000592718.1	4237	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGTGTGTGAGTTTATT	NA	False	NA	NA	False	GATAAA	-20	NA	79707265	79712317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_79707657_79708471
transcript_62346.known	chr17	+	4628	5	FSM	ENSG00000173894.11	ENST00000310942.9	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_4	86.0014534760896	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTCAACTATGGCTGT	-27	True	NA	25	True	ATTAAA	-31	NA	79778147	79787983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79783731
transcript_62347.nnic	chr17	+	436	5	NNC	ENSG00000173894.11	novel	4628	5	NA	NA	5	405	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_4	326.574933973813	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	-7	True	NA	NA	False	AATAAA	-16	NA	79778167	79788388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79788308
transcript_62348.nnic	chr17	+	330	4	NNC	ENSG00000173894.11	novel	1061	4	NA	NA	5	405	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	384.79085228212	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	-7	True	NA	NA	False	AATAAA	-16	NA	79778167	79788388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79788308
transcript_62350.known	chr17	+	567	3	FSM	ENSG00000173894.11	ENST00000571484.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_2	12	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTTTTCTGCTGAG	-12	True	NA	20	True	GATAAA	-15	NA	79778162	79779739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_79778308_79778383_79778428_79779361
transcript_62352.known	chr17	-	3752	5	FSM	ENSG00000141570.11	ENST00000269385.9	3752	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	2.29128784747792	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTCTTGGTTTTATTC	-19	True	NA	NA	False	AATATA	-16	NA	79797077	79792131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_79795559_79796056_79796124_79796249_79796316_79796496_79796541_79796929
transcript_62359.nic	chr17	-	622	2	ISM	ENSG00000167291.16	ENST00000310924.7	10960	12	12	80711	12	-62483	5prime_fragment	FALSE	canonical	3	164	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGCTTTATTTAAT	12	False	NA	-2	True	AATAAA	-15	NA	80035860	80013053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_80013610_80035794
transcript_6236.known	chr1	+	4978	15	FSM	ENSG00000198160.15	ENST00000357692.6	4978	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	40.7792088882438	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTGCTATCGATGGA	NA	False	NA	18	True	AATAAA	-19	NA	66924956	66988031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66925096_66926141_66926243_66928886_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_62360.known	chr17	-	4244	8	FSM	ENSG00000167291.16	ENST00000340848.11	4244	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	77.5647195204477	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTGCTAATGTCTGC	12	True	NA	-22	True	NA	NA	NA	79950836	79937907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79950755
transcript_62363.known	chr17	+	1970	11	FSM	ENSG00000141519.15	ENST00000269318.9	1970	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	8.9	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGAGTGAATATTTTA	4	True	NA	20	True	TATAAA	-15	NA	80036651	80067901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80067504
transcript_62364.nic	chr17	+	1990	9	ISM	ENSG00000141519.15	ENST00000269318.9	1970	11	-13	8395	-3	-7264	5prime_fragment	FALSE	canonical	3	30	junction_1	4.38748219369606	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGAGTCACCATCTTCA	-9	True	NA	NA	False	NA	NA	NA	80036638	80059506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857
transcript_62367.known	chr17	+	714	4	FSM	ENSG00000141519.15	ENST00000576241.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTTCTGTGCAAGGGAT	29	False	NA	NA	False	NA	NA	NA	80036676	80047454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278
transcript_62369.known	chr17	+	816	3	FSM	ENSG00000141519.15	ENST00000572083.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTGGTGGCGCACGCCT	16	True	NA	NA	False	ACTAAA	-17	NA	80036663	80040535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80036692_80038122_80038187_80039811
transcript_6237.known	chr1	+	1728	15	FSM	ENSG00000198160.15	ENST00000371014.5	1728	15	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	32.3520967367697	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	NA	False	NA	NA	False	NA	NA	NA	66924958	66986670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_62370.known	chr17	+	537	3	FSM	ENSG00000141519.15	ENST00000574099.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	17	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCAGAGCCATCCCAC	13	True	NA	NA	False	NA	NA	NA	80036660	80040187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80036758_80038122_80038187_80039811
transcript_62372.known	chr17	+	3549	21	FSM	ENSG00000171298.13	ENST00000390015.7	3549	21	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	34.5193786154965	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	10	True	NA	9	True	AATAAA	-15	NA	80101593	80119877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80101626_80101810_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_62377.known	chr17	+	952	2	FSM	ENSG00000171298.13	ENST00000574376.1	952	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTTCCTGAGTTCTGT	13	True	NA	NA	False	AATAAA	-18	NA	80101596	80102733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80101626_80101810
transcript_62378.known	chr17	-	2524	12	FSM	ENSG00000141543.12	ENST00000649764.2	2524	12	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_7	86.4504826499726	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAGTAATTACCTGT	-2	True	NA	3	True	ATTAAA	-23	NA	80147128	80134368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792
transcript_62379.known	chr17	-	562	2	FSM	ENSG00000141543.12	ENST00000570625.5	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	1275	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATAAACTCTATACTTC	NA	False	NA	-49	True	ATTAAA	-14	NA	80136322	80135263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_80135507_80136003
transcript_62380.known	chr17	+	172	1	FSM	ENSG00000275479.1	ENST00000619415.1	172	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTCCTCACTCTACAAA	NA	False	NA	22	True	AATAAA	-14	NA	80149626	80149798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80149600_80149800
transcript_62382.known	chr17	+	2872	18	FSM	ENSG00000181045.15	ENST00000411502.7	2872	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	36.895344367361	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTTTTAATGTCTGCGT	5	True	NA	13	True	AATAAA	-15	NA	80220437	80253498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80220497_80220918_80221116_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_62390.known	chr17	-	2705	8	FSM	ENSG00000181523.13	ENST00000326317.11	2705	8	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	15.7155843619235	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGATACCAACCTG	0	True	NA	-20	True	AGTAAA	-29	NA	80220333	80209275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_80211012_80212070_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
transcript_62391.known	chr17	+	1519	2	FSM	ENSG00000181045.15	ENST00000572652.5	1519	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	5	True	NA	NA	False	NA	NA	NA	80220437	80222375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80220497_80220915
transcript_62397.nic	chr17	+	592	4	ISM	ENSG00000173821.20	ENST00000508628.6	17730	69	-39	116402	-25	-13097	5prime_fragment	FALSE	canonical	2	2	junction_3	8.73053390247253	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCCGAGTCAATAGTTT	-29	True	NA	NA	False	NA	NA	NA	80260826	80278910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_80260903_80263573_80263779_80273240_80273405_80278763
transcript_62401.nic	chr17	+	445	3	ISM	ENSG00000173821.20	ENST00000319921.4	5316	17	-43	48059	-25	-18603	5prime_fragment	FALSE	canonical	3	20	junction_1	0.5	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	-29	True	NA	51	True	AAGAAA	-45	NA	80260826	80273404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_80260903_80263573_80263779_80273240
transcript_62402.nnic	chr17	+	351	3	NNC	ENSG00000173821.20	novel	5316	17	NA	NA	-20	-18603	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.5	212	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	-24	True	NA	51	True	AAGAAA	-45	NA	80260831	80273404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_80260903_80263662_80263779_80273240
transcript_62404.known	chr17	+	21055	68	FSM	ENSG00000173821.20	ENST00000582970.6	21079	68	16	8	2	-8	multi-exon	FALSE	canonical	3	14	junction_18	44.8091519945726	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGAGATATATATA	12	True	NA	NA	False	NA	NA	NA	80260867	80398786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80260903_80263573_80263779_80273240_80273405_80287814_80288364_80288632_80288756_80289658_80289838_80290569_80290729_80291627_80291828_80294719_80295004_80295556_80295814_80298320_80298519_80306251_80306469_80307127_80307202_80309017_80309172_80313011_80313168_80317187_80317278_80319189_80319313_80325029_80325199_80327815_80327990_80328327_80328478_80332005_80332632_80334104_80334271_80336160_80336379_80337585_80337727_80337832_80337998_80339200_80340357_80343131_80343326_80343856_80344016_80344677_80348287_80349769_80349907_80350300_80350397_80351684_80351804_80352939_80353060_80353511_80353667_80354018_80354167_80354440_80354577_80358287_80358480_80360060_80360207_80361733_80361889_80363101_80363315_80363608_80363791_80364432_80364554_80367747_80367849_80367960_80368144_80369501_80369672_80369767_80369868_80371873_80371986_80372520_80372735_80372974_80373166_80374457_80374590_80375759_80375871_80376300_80376544_80376881_80376964_80377761_80377797_80379619_80379715_80380830_80380988_80381546_80381728_80382978_80383071_80383676_80383929_80385038_80385172_80385537_80385622_80386249_80386431_80386689_80386892_80388611_80388690_80389172_80389368_80389827_80389918_80390011_80390197_80393344
transcript_62415.nic	chr17	+	1182	10	NIC	ENSG00000173818.17	novel	2820	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.1179174895762	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	NA	False	NA	25	True	AATAGA	-22	NA	80415151	80430341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_62416.known	chr17	+	2820	10	FSM	ENSG00000173818.17	ENST00000518137.6	2820	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7704670451038	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTTTTTTCTTCAG	-10	True	NA	6	True	AATAAA	-22	NA	80415166	80438086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_62425.nic	chr17	+	1190	10	NIC	ENSG00000173818.17	novel	908	9	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	31.8437543540021	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	235	False	NA	25	True	AATAGA	-22	NA	80415411	80430341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415519_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_62428.nic	chr17	+	1391	9	ISM	ENSG00000173818.17	ENST00000518137.6	2820	10	-13	7743	-11	0	5prime_fragment	FALSE	canonical	0	0	junction_3	29.1965323283434	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	NA	False	NA	27	True	AATAGA	-24	NA	80415153	80430343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_62433.nic	chr17	+	1052	9	NIC	ENSG00000173818.17	novel	2680	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	16.1322658049017	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	NA	False	NA	25	True	AATAGA	-22	NA	80415146	80430341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_62439.nic	chr17	+	1055	9	NIC	ENSG00000173818.17	novel	908	9	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	24.7891105124811	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	235	False	NA	25	True	AATAGA	-22	NA	80415411	80430341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415519_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_6244.known	chr1	+	5456	14	FSM	ENSG00000198160.15	ENST00000401041.6	5456	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	33.1550062263578	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	-9	True	NA	NA	False	ATTAAA	-17	NA	66924989	66988619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_62443.known	chr17	+	1226	8	FSM	ENSG00000173818.17	ENST00000323854.9	1226	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	14.121918121437	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	7	True	NA	27	True	AATAGA	-24	NA	80415183	80430343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_62449.nic	chr17	+	1209	8	NIC	ENSG00000173818.17	novel	1475	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	19	junction_1	25.4830876288969	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	1	True	NA	27	True	AATAGA	-24	NA	80415468	80430343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415519_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_62456.known	chr17	+	702	7	FSM	ENSG00000173818.17	ENST00000522577.5	702	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	29.7624857086157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCACAGGACCACAGCCC	-10	True	NA	NA	False	NA	NA	NA	80415166	80429842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_62464.known	chr17	+	508	6	FSM	ENSG00000173818.17	ENST00000520484.1	508	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.366650958212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGTCCTCAGGTGAGGG	-12	True	NA	NA	False	NA	NA	NA	80415164	80429818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_6247.known	chr1	+	1648	14	FSM	ENSG00000198160.15	ENST00000401042.7	1648	14	0	0	0	0	multi-exon	FALSE	canonical	2	65	junction_1	20.0673422468465	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	-24	True	NA	NA	False	NA	NA	NA	66930242	66986670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_62472.nic	chr17	+	465	3	NIC	ENSG00000173818.17	novel	375	2	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	34.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCCCCTGCGTAATT	-13	True	NA	23	True	AATAAA	-37	NA	80415163	80417145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415251_80415649_80415822_80416939
transcript_62476.nnic	chr17	+	657	3	NIC	ENSG00000173818.17	novel	864	4	NA	NA	-1	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGGTATGTTAATTGT	-13	True	NA	NA	False	TTTAAA	-9	NA	80415163	80418839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415251_80415649_80415822_80418441
transcript_62478.nnic	chr17	+	699	3	NNC	ENSG00000173818.17	novel	690	2	NA	NA	-13	22243	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	35.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAAAAAACACACCAC	NA	False	NA	NA	False	AAAACA	-7	NA	80415151	80460329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_80415251_80415649_80416229_80460308
transcript_62479.nic	chr17	+	485	3	NIC	ENSG00000173818.17	novel	375	2	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCCCCTGCGTAATT	235	False	NA	23	True	AATAAA	-37	NA	80415411	80417145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415519_80415649_80415822_80416939
transcript_62482.known	chr17	+	690	2	FSM	ENSG00000173818.17	ENST00000520537.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTCTGGGGAGTCT	-12	True	NA	NA	False	NA	NA	NA	80415164	80416253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649
transcript_62483.nnic	chr17	-	1092	2	NNC	ENSG00000263069.6	novel	522	2	NA	NA	-45161	-34154	intron_retention	TRUE	canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCGACTCGCTCTGACG	7923	False	NA	NA	False	NA	NA	NA	80460329	80415157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_80416229_80460308
transcript_62484.nic	chr17	+	708	2	ISM	ENSG00000173818.17	ENST00000523228.5	545	5	-41	5992	-40	-3	5prime_fragment	FALSE	canonical	3	19	junction_1	0	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTCTGGGGAG	235	False	NA	NA	False	NA	NA	NA	80415411	80416250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_80415519_80415649
transcript_62485.known	chr17	+	2680	9	FSM	ENSG00000173818.17	ENST00000520367.5	2680	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	27.2304976083802	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTTGATTTTTTTTC	-10	True	NA	1	True	AATAAA	-17	NA	80415166	80438081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_62486.known	chr17	+	375	2	FSM	ENSG00000173818.17	ENST00000523165.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCCCCTGCGTAATT	185	False	NA	23	True	AATAAA	-37	NA	80415652	80417145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415822_80416939
transcript_62487.known	chr17	+	1847	2	FSM	ENSG00000173818.17	ENST00000521847.5	1847	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGGTATGTTAATT	1	True	NA	NA	False	TTTAAA	-7	NA	80415468	80418837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415822_80417343
transcript_62488.known	chr17	+	2286	9	FSM	ENSG00000141564.15	ENST00000570891.5	2286	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	3.6721077053921	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTTTATGCTTATTTC	25	True	NA	9	True	ATTAAA	-20	NA	80544876	80823620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80545792_80625690_80625794_80643727_80643811_80707840_80708000_80730559_80730707_80754009_80754186_80791449_80791510_80822200_80822302_80823078
transcript_62490.known	chr17	+	1664	8	FSM	ENSG00000176108.9	ENST00000325167.9	1664	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_7	13.7425304386471	541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCGTGGACTTGGGCG	-19	True	NA	26	True	ATTAAA	-19	NA	80991840	81000133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80991982_80994580_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365_80998421_80999097
transcript_62492.known	chr17	+	2229	16	FSM	ENSG00000175866.16	ENST00000575245.5	2229	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	23.3748202607469	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTGATCTGTCCGCC	8	True	NA	21	True	AATAAA	-16	NA	81035157	81116225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110956_81115769
transcript_62493.known	chr17	+	2129	15	FSM	ENSG00000175866.16	ENST00000435091.7	2129	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	14.5428641594145	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTGATCTGTCCGC	12	False	NA	20	True	AATAAA	-15	NA	81035161	81116224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110960_81115769
transcript_62496.known	chr17	+	1939	14	FSM	ENSG00000175866.16	ENST00000321280.11	1939	14	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_13	12.8450022514687	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACTGCCAGGCAGGAC	3622	False	NA	NA	False	NA	NA	NA	81035121	81109238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_62497.known	chr17	+	3304	14	FSM	ENSG00000175866.16	ENST00000428708.7	3304	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	14.4733993913257	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATCACCCAACTTCC	1	True	NA	NA	False	AATAAA	-26	NA	81035150	81117434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
transcript_6250.known	chr1	+	4818	13	FSM	ENSG00000198160.15	ENST00000355356.3	4818	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	19.3238123107792	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTGCTATCGATGG	-24	True	NA	17	True	AATAAA	-18	NA	66930242	66988030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_62500.known	chr17	+	2512	13	FSM	ENSG00000175866.16	ENST00000575712.5	2512	13	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	6.91767060987054	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	6	True	NA	NA	False	AAAAAG	-25	NA	81035155	81109387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474
transcript_62503.known	chr17	-	1747	13	FSM	ENSG00000141577.14	ENST00000573053.5	1747	13	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_5	44.1653301684578	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTTGAGTGACTGCCTT	60	False	NA	-12	True	AGTAAA	-18	NA	81197019	81189596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191351_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929
transcript_62505.known	chr17	-	2455	13	FSM	ENSG00000167302.11	ENST00000637944.2	2455	13	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_12	13.6737786373124	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-10	True	NA	-5	True	AATAAA	-19	NA	81239055	81228276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_62507.known	chr17	-	2287	12	FSM	ENSG00000167302.11	ENST00000300714.7	2287	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	22.0555272208972	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-2	True	NA	-5	True	AATAAA	-19	NA	81239091	81228276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_62510.known	chr17	+	278	3	FSM	ENSG00000224877.4	ENST00000577158.2	278	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	455	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCACATATCGAATGCC	4	True	NA	NA	False	NA	NA	NA	81239304	81241081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81239404_81239594_81239679_81240986
transcript_62511.known	chr17	+	741	3	FSM	ENSG00000224877.4	ENST00000573090.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	379.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCGTAAACCTGAGTTAG	-31	True	NA	29	True	NA	NA	NA	81239310	81241214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81239448_81239567_81239944_81240986
transcript_62512.nic	chr17	+	490	2	ISM	ENSG00000224877.4	ENST00000431388.3	565	3	195	0	-98	0	3prime_fragment	FALSE	canonical	3	910	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTCTTGGCCTCTC	171	False	NA	67	True	GGGGCT	-20	NA	81239512	81241310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_81239679_81240986
transcript_62513.known	chr17	+	365	2	FSM	ENSG00000224877.4	ENST00000576002.1	365	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGGGGCTTACTGTGT	269	False	NA	36	True	GATAAA	-18	NA	81239610	81241279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81239683_81240986
transcript_62514.nic	chr17	+	532	2	ISM	ENSG00000224877.4	ENST00000573090.1	741	3	396	-67	78	2	3prime_fragment	FALSE	canonical	2	2	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGGGCTTACTGTGTGC	365	False	NA	38	True	GATAAA	-20	NA	81239706	81241281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_81239944_81240986
transcript_62515.known	chr17	+	709	2	FSM	ENSG00000224877.4	ENST00000573173.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGAGGCGTGGGTAG	572	False	NA	-16	True	NA	NA	NA	81239913	81241169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81240440_81240986
transcript_62516.known	chr17	-	233	2	FSM	ENSG00000185332.8	ENST00000577027.1	233	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACAAAAGTTAGCCAGG	4771	False	NA	NA	False	NA	NA	NA	81329517	81327759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81327942_81329466
transcript_62517.known	chr17	-	633	2	FSM	ENSG00000185332.8	ENST00000571868.1	633	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAGAAAAAAGAA	3859	False	NA	NA	False	NA	NA	NA	81330429	81327594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81327942_81330143
transcript_62521.known	chr17	-	1449	6	FSM	ENSG00000184009.13	ENST00000571721.6	1449	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	6445.86870483723	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	1977	False	NA	NA	False	NA	NA	NA	81512778	81510689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512463
transcript_62524.known	chr17	-	1749	7	FSM	ENSG00000184009.13	ENST00000681092.1	1749	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7446.35925954572	5133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	0	True	NA	28	True	AATAAA	-12	NA	81512800	81509976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512247_81512361_81512733
transcript_62525.known	chr17	-	1919	6	FSM	ENSG00000184009.13	ENST00000573283.7	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_5	972.401768817807	36314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGCTCCTGTTTGGGG	1	True	NA	34	True	AATAAA	-18	NA	81512799	81509970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_62526.known	chr17	-	2005	7	FSM	ENSG00000184009.13	ENST00000572105.7	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	6943.3511941681	4877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	1904	False	NA	27	True	AATAAA	-11	NA	81512851	81509977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511762_81511804_81511902_81512143_81512231_81512361_81512733
transcript_62527.known	chr17	-	2241	5	FSM	ENSG00000184009.13	ENST00000574671.6	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_4	849.349898451751	5144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	1904	False	NA	28	True	AATAAA	-12	NA	81512851	81509976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81512143_81512231_81512361_81512733
transcript_62528.known	chr17	-	2141	6	FSM	ENSG00000184009.13	ENST00000679535.1	2141	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	6180.66490274307	4877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	1904	False	NA	27	True	AATAAA	-11	NA	81512851	81509977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_62529.known	chr17	-	1958	5	FSM	ENSG00000184009.13	ENST00000576917.5	1958	5	0	0	0	0	multi-exon	FALSE	canonical	3	13923	junction_4	1082.03220261691	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGCTGCCGTAACCA	1975	False	NA	13	True	NA	NA	NA	81512780	81509991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
transcript_62530.known	chr17	-	1859	7	FSM	ENSG00000184009.13	ENST00000681842.1	1859	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5909.15447044292	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGCTCCTGTTTGGGG	1908	False	NA	34	True	AATAAA	-18	NA	81512847	81509970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510288_81510395_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_62531.known	chr17	-	1842	6	FSM	ENSG00000184009.13	ENST00000680727.1	1842	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6459.43971564098	3547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	2251	False	NA	28	True	AATAAA	-12	NA	81512504	81509976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231
transcript_62532.nnic	chr17	-	535	4	NIC	ENSG00000182446.14	novel	301	3	NA	NA	100	-1	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	339.559518592347	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATACTTGGCCATGTGA	7309	False	NA	NA	False	AATAAA	-19	NA	81629775	81612679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_81612874_81613317_81613495_81622165_81622279_81629724
transcript_62533.known	chr17	+	1896	2	FSM	ENSG00000182612.10	ENST00000571914.1	1896	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTGGTGGTTTGGAAT	NA	False	NA	NA	False	AATATA	-22	NA	81637170	81639177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81637407_81637517
transcript_62537.known	chr17	-	458	4	FSM	ENSG00000185527.12	ENST00000571004.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.10960933531265	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGGGACTGCAACCT	20	True	NA	NA	False	NA	NA	NA	81653694	81650962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81651151_81651644_81651686_81653159_81653365_81653670
transcript_62539.known	chr17	-	923	2	FSM	ENSG00000204237.5	ENST00000571757.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCACACCCCCTCACAGA	-29	True	NA	-107	True	NA	NA	NA	81666633	81665140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81666154
transcript_62540.known	chr17	-	821	2	FSM	ENSG00000204237.5	ENST00000575992.1	821	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCAGCCTCCTTCCTTC	151	False	NA	-122	True	NA	NA	NA	81666537	81665155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81666145
transcript_62541.known	chr17	-	637	2	FSM	ENSG00000204237.5	ENST00000374741.4	637	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-1	True	NA	-2	True	AATAAA	-24	NA	81666605	81665035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81666517
transcript_62542.known	chr17	-	553	2	FSM	ENSG00000204237.5	ENST00000571092.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTGGGCTCCCAAGCA	26	True	NA	NA	False	NA	NA	NA	81666578	81665460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81666149
transcript_62543.known	chr17	-	1600	1	FSM	ENSG00000204237.5	ENST00000575963.1	1600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-31	True	NA	-2	True	AATAAA	-24	NA	81666635	81665035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665000_81666600
transcript_62544.known	chr17	+	2095	6	FSM	ENSG00000185298.13	ENST00000329214.13	2095	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	15.4609184720702	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAATTGGAGAATATA	-4	True	NA	20	True	ATTAAA	-20	NA	81666736	81673899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81666901_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_62548.nnic	chr17	+	1174	4	NNC	ENSG00000185298.13	novel	2095	6	NA	NA	-32	857	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	162.039775638233	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTTTGAAGGTTTGA	NA	False	NA	NA	False	AAAAAG	-10	NA	81666704	81671148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_81666901_81667728_81667863_81670224_81670454_81670533
transcript_6255.nic	chr1	+	987	9	ISM	ENSG00000198160.15	ENST00000357692.6	4978	15	-74	24879	-12	3074	5prime_fragment	FALSE	canonical	3	9	junction_2	45.5898837462874	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGTGGGTTATTAG	NA	False	NA	NA	False	AAGAAA	-2	NA	66924882	66963152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_66925096_66926141_66926243_66928886_66928964_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_62552.known	chr17	+	2978	23	FSM	ENSG00000185359.14	ENST00000678105.1	2978	23	0	0	0	0	multi-exon	TRUE	canonical	2	37	junction_1	200.674405299103	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	-18	True	NA	6	True	AATAAA	-13	NA	81683999	81702116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81684104_81684812_81684892_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_62554.known	chr17	+	2893	22	FSM	ENSG00000185359.14	ENST00000329138.9	2893	22	0	0	0	0	multi-exon	FALSE	canonical	2	512	junction_17	77.2118151521707	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTTTTTTCTTTAATT	-7	True	NA	11	True	AATAAA	-18	NA	81684010	81702121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_62563.known	chr17	-	763	5	FSM	ENSG00000214087.9	ENST00000573715.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	214.739376920024	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAACCCTACATGATGG	3391	False	NA	NA	False	NA	NA	NA	81683668	81681607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682150_81682490_81682676_81683012_81683127_81683592
transcript_62566.known	chr17	-	694	4	FSM	ENSG00000214087.9	ENST00000576135.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	217.306235529494	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCTCACACCTGTAAT	3391	False	NA	NA	False	AAAAAG	-20	NA	81683668	81681491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683592
transcript_62569.known	chr17	-	869	3	FSM	ENSG00000214087.9	ENST00000573392.5	869	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	257	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTGTCCCCA	3393	False	NA	-46	True	AATAAA	-1	NA	81683666	81681200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682150_81683592
transcript_62574.known	chr17	-	1977	1	FSM	ENSG00000262049.1	ENST00000575312.1	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGGATGCGCGTATCTG	-4	True	NA	NA	False	AGTAAA	-23	NA	81703300	81701323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81701300_81703300
transcript_62575.known	chr17	-	1087	5	FSM	ENSG00000214087.9	ENST00000622299.5	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	200.993003609578	4124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-4	True	NA	-32	True	AATAAA	-15	NA	81683797	81681186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683595_81683692
transcript_62576.known	chr17	-	1526	5	FSM	ENSG00000214087.9	ENST00000571082.5	1526	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	230.684849957686	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATATAAGAAATAAAA	5	True	NA	-65	True	NA	NA	NA	81683743	81681219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682676_81683012_81683127_81683535_81683595_81683692
transcript_62577.known	chr17	-	2343	3	FSM	ENSG00000214087.9	ENST00000577142.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	3278	False	NA	-32	True	AATAAA	-15	NA	81683781	81681186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81683595_81683692
transcript_62578.known	chr17	-	1856	4	FSM	ENSG00000214087.9	ENST00000570910.1	1856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	229.037114896254	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATATAAGAAATAA	10	True	NA	-67	True	NA	NA	NA	81683738	81681221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81683127_81683535_81683595_81683692
transcript_62579.known	chr17	+	1942	11	FSM	ENSG00000183048.12	ENST00000350690.10	1942	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	26.9646064313945	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	-16	True	NA	16	True	AATAAA	-16	NA	81712283	81721012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717783_81717862_81719830_81719888_81719975
transcript_62580.known	chr17	+	1009	5	FSM	ENSG00000262814.8	ENST00000333676.8	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_4	33.1841453106751	3498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGAGTGCCGTGCTC	-10	True	NA	29	True	AATACA	-13	NA	81703366	81707517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81703576_81704243_81704431_81704632_81704717_81706905_81707041_81707123
transcript_62582.known	chr17	-	1038	7	FSM	ENSG00000225663.8	ENST00000572645.5	1038	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	439.988636216891	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	11	True	NA	-18	True	AATAAA	-16	NA	81833268	81822416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379_81826516_81833237
transcript_62587.known	chr17	-	1282	5	FSM	ENSG00000225663.8	ENST00000455127.7	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_4	162.915622332544	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGGCAGGGCTGGAA	-12	True	NA	38	True	NA	NA	NA	81833291	81822360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_62588.known	chr17	-	925	6	FSM	ENSG00000225663.8	ENST00000538396.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_1	227.57029683155	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-12	True	NA	-18	True	AATAAA	-16	NA	81833291	81822416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_62589.known	chr17	-	1123	4	FSM	ENSG00000225663.8	ENST00000573478.5	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	366.400812711374	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	4533	False	NA	-30	True	AATAAA	-4	NA	81833302	81822428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81823312_81824286_81824406_81824498_81824555_81833237
transcript_6259.nic	chr1	+	910	8	ISM	ENSG00000198160.15	ENST00000371014.5	1728	15	-76	23518	-12	3074	5prime_fragment	FALSE	canonical	3	30	junction_2	38.5597866028476	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGTGGGTTATTAG	NA	False	NA	NA	False	AAGAAA	-2	NA	66924882	66963152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_62590.known	chr17	-	2469	11	FSM	ENSG00000185624.16	ENST00000681031.1	2469	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	737.381509125364	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACACATTGGCCAAA	9341	False	NA	-46	True	NA	NA	NA	81860613	81843201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860336
transcript_62591.known	chr17	-	2371	11	FSM	ENSG00000185624.16	ENST00000680593.1	2371	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	724.42876806488	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-1	True	NA	-10	True	AATAAA	-13	NA	81860535	81843165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845626_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_62592.known	chr17	-	2299	10	FSM	ENSG00000185624.16	ENST00000439918.7	2299	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	756.488933278498	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACACATTGGCCAAATAA	9392	False	NA	-43	True	NA	NA	NA	81860562	81843198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81859178_81859388_81860326
transcript_62593.known	chr17	-	1989	10	FSM	ENSG00000185624.16	ENST00000680732.1	1989	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	758.349539916362	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATCATGGCTCTTGCAT	1	True	NA	NA	False	NA	NA	NA	81860569	81843513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81859180_81859388_81860326
transcript_62595.known	chr17	+	529	2	FSM	ENSG00000262831.1	ENST00000576784.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	895	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTGCAGCCCCCGAGG	NA	False	NA	NA	False	NA	NA	NA	81843164	81843958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81843334_81843598
transcript_6260.nnic	chr1	+	986	8	Fusion	ENSG00000198160.15_ENSG00000289394.1	novel	473	2	NA	NA	-81	3074	multi-exon	FALSE	canonical	3	13	junction_1	42.9009300122779	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGTGGGTTATTAG	204	False	NA	NA	False	AAGAAA	-2	NA	66925245	66963152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_66925535_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_62601.known	chr17	+	325	1	FSM	ENSG00000278876.1	ENST00000623802.1	325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGAGTTTCTGTTTGT	1666	False	NA	NA	False	NA	NA	NA	81862777	81863102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81862800_81863100
transcript_62602.known	chr17	-	1837	6	FSM	ENSG00000141522.12	ENST00000269321.12	1837	6	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_5	85.8882995523837	908	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	12	True	NA	-18	True	AATAAA	-14	NA	81871337	81867720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_62603.known	chr17	-	5089	13	FSM	ENSG00000185813.11	ENST00000538936.7	5089	13	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_7	25.675728919654	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTCCTGTCTCTCTA	14	True	NA	1	True	AATAAA	-21	NA	81911399	81900957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_62611.known	chr17	-	1097	6	FSM	ENSG00000183684.8	ENST00000505490.3	1097	6	0	0	0	0	multi-exon	FALSE	canonical	3	1508	junction_5	131.260047234488	8922	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGATTCGTCCCACTG	3	True	NA	-5	True	AATAAA	-25	NA	81891586	81887834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81888146_81888240_81888419_81888519_81888584_81889181_81889330_81890688_81890821_81891322
transcript_62618.known	chr17	+	599	5	FSM	ENSG00000141552.18	ENST00000578550.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1598.0032071307	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGAAACAAGGGCTGGA	8	True	NA	-72	True	NA	NA	NA	81891749	81900159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891842_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_62620.known	chr17	+	672	5	FSM	ENSG00000141552.18	ENST00000577747.5	672	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1603.35607009173	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	18	True	NA	23	True	ATTAAA	-14	NA	81891759	81900254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891830_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_62624.known	chr17	+	578	4	FSM	ENSG00000141552.18	ENST00000572639.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1569.85908780233	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	NA	False	NA	24	True	ATTAAA	-15	NA	81891646	81900255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891706_81893551_81893615_81894466_81894587_81899919
transcript_62628.known	chr17	+	636	4	FSM	ENSG00000141552.18	ENST00000571874.6	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	1475.81804057576	3117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	4	True	NA	23	True	ATTAAA	-14	NA	81891745	81900254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891864_81893551_81893615_81894466_81894587_81899919
transcript_62640.known	chr17	+	687	4	FSM	ENSG00000141552.18	ENST00000392376.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1535.83426478539	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	13	True	NA	23	True	ATTAAA	-14	NA	81891937	81900254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81892107_81893551_81893615_81894466_81894587_81899919
transcript_62645.known	chr17	+	575	3	FSM	ENSG00000141552.18	ENST00000579978.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	1606.5	5414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	-22	True	NA	21	True	ATTAAA	-12	NA	81891719	81900252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891842_81894466_81894587_81899919
transcript_62646.known	chr17	+	563	3	FSM	ENSG00000141552.18	ENST00000579133.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	176	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	30	False	NA	23	True	ATTAAA	-14	NA	81891771	81900254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891842_81894466_81894625_81899919
transcript_62649.known	chr17	+	499	3	FSM	ENSG00000141552.18	ENST00000583839.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1898	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	43	False	NA	23	True	ATTAAA	-14	NA	81892062	81900254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81892107_81894466_81894587_81899919
transcript_62651.known	chr17	+	686	3	FSM	ENSG00000141552.18	ENST00000572851.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	1818.5	1857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-7	True	NA	27	True	AATAAA	-21	NA	81891734	81900356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891864_81894466_81894587_81899919
transcript_62652.known	chr17	+	638	4	FSM	ENSG00000141552.18	ENST00000344877.10	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	749	junction_1	1280.11622736201	8157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	-19	True	NA	24	True	ATTAAA	-15	NA	81891722	81900255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891842_81893551_81893615_81894466_81894587_81899919
transcript_62653.known	chr17	+	722	4	FSM	ENSG00000141552.18	ENST00000574924.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_1	1287.45045212104	4458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-10	True	NA	27	True	AATAAA	-21	NA	81891731	81900356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891834_81893551_81893615_81894466_81894587_81899919
transcript_62654.known	chr17	+	668	3	FSM	ENSG00000141552.18	ENST00000571024.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	1546	4052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	-19	True	NA	27	True	AATAAA	-21	NA	81891722	81900356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891834_81894466_81894587_81899919
transcript_62655.known	chr17	+	603	3	FSM	ENSG00000141552.18	ENST00000577425.5	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	236.5	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGGGTGC	-19	True	NA	22	True	ATTAAA	-13	NA	81891722	81900253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891834_81894466_81894625_81899919
transcript_62656.known	chr17	+	881	4	FSM	ENSG00000141552.18	ENST00000357385.7	881	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	101.983658821728	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	-3	True	NA	23	True	ATTAAA	-14	NA	81891738	81900254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891864_81894466_81894587_81899241_81899543_81899919
transcript_62657.known	chr17	+	1895	2	FSM	ENSG00000265688.2	ENST00000582106.1	1895	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCCAAACCGCTTCAT	-12	True	NA	12	True	NA	NA	NA	81927828	81930753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81928446_81929475
transcript_6266.nic	chr1	+	778	7	ISM	ENSG00000198160.15	ENST00000401042.7	1648	14	-24	23518	-24	3074	5prime_fragment	FALSE	canonical	3	65	junction_1	21.7689891563409	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAAGGTGGGTTATTAG	38	False	NA	NA	False	AAGAAA	-2	NA	66930218	66963152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_62664.known	chr17	-	1346	8	FSM	ENSG00000183010.17	ENST00000402252.6	1346	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	467.131585709366	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGTCTTCACCCACTCC	8	True	NA	NA	False	NA	NA	NA	81937239	81932934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937179
transcript_62665.known	chr17	-	1904	8	FSM	ENSG00000183010.17	ENST00000619204.4	1904	8	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_7	321.126524749917	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_62669.known	chr17	-	1740	7	FSM	ENSG00000183010.17	ENST00000629768.2	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	513.589221936061	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_62672.known	chr17	-	1811	7	FSM	ENSG00000183010.17	ENST00000403172.8	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	548.259797500743	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-23	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934325_81934490_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_62679.known	chr17	-	2269	7	FSM	ENSG00000183010.17	ENST00000329875.13	2269	7	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_2	129.815253341046	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	5	True	NA	-19	True	ATTAAA	-18	NA	81937300	81932390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_62680.known	chr17	-	1890	8	FSM	ENSG00000183010.17	ENST00000337943.9	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	467.469741463203	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-10	True	NA	-12	True	ATTAAA	-25	NA	81937257	81932383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81932964_81933306_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_62681.known	chr17	-	767	7	FSM	ENSG00000183010.17	ENST00000585215.5	767	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	487.794497941728	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAAGGACAACGTCAGCT	5	True	NA	NA	False	GGGGCT	-39	NA	81937300	81934445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937257
transcript_62682.known	chr17	+	2123	17	FSM	ENSG00000169696.16	ENST00000306729.11	2123	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	147.16486025458	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCCTTCCTGTCATGCTT	1	True	NA	19	True	AATAAA	-17	NA	81977549	82017404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82015074_82015357_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_62685.known	chr17	+	1764	16	FSM	ENSG00000169696.16	ENST00000306739.9	1764	16	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_7	38.8722122973325	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	10	True	NA	21	True	AATAAA	-19	NA	81977628	82017406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_62693.nnic	chr17	+	1263	14	NIC	ENSG00000169696.16	novel	1764	16	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	120.951112428258	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	10	True	NA	21	True	AATAAA	-19	NA	81977628	82017406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_62696.nic	chr17	+	1208	13	NIC	ENSG00000169696.16	novel	1764	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	119.035796436758	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	7	True	NA	21	True	AATAAA	-19	NA	81977625	82017406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_62704.known	chr17	+	564	6	FSM	ENSG00000169696.16	ENST00000579684.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	174.179218048538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTGTTTTGATCATTTT	86	False	NA	12	True	AATAAA	-12	NA	81977704	81995147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81994957
transcript_62706.known	chr17	+	720	5	FSM	ENSG00000169696.16	ENST00000581647.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	34.0248071265658	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTTGATCATTTTCAA	12	True	NA	15	True	AATAAA	-15	NA	81977630	81995150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820
transcript_62709.known	chr17	+	2698	17	FSM	ENSG00000169683.8	ENST00000306688.8	2698	17	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_12	14.1574571781094	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCCGCCTCTCC	7	True	NA	15	True	AATACA	-22	NA	82023304	82031151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82023864_82024277_82024340_82024692_82024764_82024999_82025179_82025378_82025508_82026898_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612_82028684_82029092_82029186_82029542_82029636_82030064_82030239_82030318_82030467_82030608
transcript_62718.known	chr17	-	702	4	FSM	ENSG00000169689.15	ENST00000579520.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	742.841840501732	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTTCTTGCCATTAA	NA	False	NA	-18	True	AATAAA	-20	NA	82024107	82018701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82024064
transcript_62722.known	chr17	-	730	5	FSM	ENSG00000169689.15	ENST00000584600.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	540.299454006757	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	23	False	NA	-19	True	AATAAA	-19	NA	82022858	82018702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019307_82019382_82019640_82019695_82019857_82019910_82022825
transcript_62723.known	chr17	-	710	4	FSM	ENSG00000169689.15	ENST00000580435.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	624.174299018756	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-11	True	NA	-19	True	AATAAA	-19	NA	82022892	82018702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019307_82019382_82019857_82019910_82022825
transcript_62724.known	chr17	-	882	5	FSM	ENSG00000169689.15	ENST00000584514.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	614.020917803294	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTCTCCCAGCTTGGC	7	True	NA	-32	True	AATAAA	-6	NA	82022821	82018715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022638
transcript_62725.known	chr17	-	799	5	FSM	ENSG00000169689.15	ENST00000584347.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	687.711921882993	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCCAGCCATGCGATAT	2	True	NA	-117	True	NA	NA	NA	82022879	82018800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022825
transcript_62726.known	chr17	+	1038	6	FSM	ENSG00000169750.9	ENST00000306897.9	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	29.36256119619	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	9	True	NA	37	True	AATAAA	-16	NA	82031677	82034204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82031797_82032386_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_62728.known	chr17	+	730	5	FSM	ENSG00000169750.9	ENST00000584341.1	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	58.1420673867038	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTCTGCCCGCCCCC	-7	True	NA	NA	False	NA	NA	NA	82032183	82033772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82032499_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_62736.known	chr17	-	676	8	FSM	ENSG00000169738.8	ENST00000582900.5	676	8	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	356.415373359998	1734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCATGACCACGGGTT	8	True	NA	NA	False	NA	NA	NA	82037687	82036017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037542_82037630
transcript_62769.known	chr17	-	968	6	FSM	ENSG00000169738.8	ENST00000578885.5	968	6	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_5	116.085141168024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGCTGCCCAGACTA	51	False	NA	-20	True	AATAAA	-3	NA	82037681	82035895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
transcript_62774.known	chr17	-	1076	5	FSM	ENSG00000169738.8	ENST00000580750.5	1076	5	0	0	0	0	multi-exon	FALSE	canonical	3	798	junction_4	124.061224804529	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTGCTATTCCTAGG	-2	True	NA	-5	True	AATAAA	-18	NA	82037697	82035880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036764_82036858_82037014_82037449_82037548_82037630
transcript_62778.known	chr17	-	715	5	FSM	ENSG00000169738.8	ENST00000579842.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_1	40.5246838359043	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTGCTATTCCTAGG	745	False	NA	-5	True	AATAAA	-18	NA	82036987	82035880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036764_82036858
transcript_62779.known	chr17	-	617	3	FSM	ENSG00000169738.8	ENST00000582613.5	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_1	24	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCACCCCAGCCCCAGC	-1	True	NA	NA	False	NA	NA	NA	82037309	82036520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036644_82036720_82036764_82036858
transcript_62780.known	chr17	-	631	5	FSM	ENSG00000169738.8	ENST00000582074.5	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_3	35.3022662162077	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACCTGATTCTGCTGC	804	False	NA	-28	True	NA	NA	NA	82036928	82035903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036449_82036543_82036644_82036720_82036764_82036858
transcript_62781.known	chr17	-	553	3	FSM	ENSG00000169738.8	ENST00000577286.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_1	51.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTGCTATTCCTAGG	1097	False	NA	-5	True	AATAAA	-18	NA	82036635	82035880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036309_82036383
transcript_62782.known	chr17	+	304	2	FSM	ENSG00000264569.2	ENST00000582558.2	597	2	159	134	130	-134	multi-exon	FALSE	canonical	0	0	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTCACCCTCCTTACC	112	False	NA	NA	False	NA	NA	NA	82038030	82039246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82038269_82039180
transcript_62783.nnic	chr17	+	731	2	NNC	ENSG00000264569.2	novel	713	2	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	5631	False	NA	8	True	NA	NA	NA	82037850	82039380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_82038382_82039180
transcript_62784.known	chr17	+	709	2	FSM	ENSG00000264569.2	ENST00000584705.2	713	2	4	0	4	0	multi-exon	FALSE	canonical	3	5	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	5685	False	NA	8	True	NA	NA	NA	82037904	82039380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82038414_82039180
transcript_62788.known	chr17	+	1949	14	FSM	ENSG00000169727.13	ENST00000320548.8	1949	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	501.18220003621	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	-28	True	NA	28	True	ATTAAA	-17	NA	82051874	82057470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82051965_82052374_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_6279.known	chr1	-	6193	12	FSM	ENSG00000116704.8	ENST00000235345.6	6193	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	5.04197259049529	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGACTAATCCAGAGC	2	True	NA	-9	True	AATAAA	-45	NA	67054148	66999349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_67004449_67009084_67009168_67020368_67020448_67021534_67021603_67042235_67042329_67047264_67047368_67049781_67049851_67050432_67050505_67052011_67052080_67052770_67052858_67052955_67052990_67053810
transcript_62790.nic	chr17	+	1847	13	NIC	ENSG00000169727.13	novel	875	8	NA	NA	-25	0	combination_of_known_junctions	TRUE	canonical	3	62	junction_1	405.250359860009	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	NA	False	NA	28	True	ATTAAA	-17	NA	82051451	82057470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_82051525_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_62792.known	chr17	+	1842	13	FSM	ENSG00000169727.13	ENST00000306823.10	1842	13	0	0	0	0	multi-exon	TRUE	canonical	3	217	junction_3	381.132404450504	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	6	True	NA	28	True	ATTAAA	-17	NA	82051908	82057470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_62806.known	chr17	-	1865	8	FSM	ENSG00000169733.12	ENST00000310496.9	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_6	38.7693335574626	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	18	True	NA	-1	True	AGTAAA	-19	NA	82051811	82047901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293_82051343_82051499
transcript_62807.known	chr17	-	994	7	FSM	ENSG00000169733.12	ENST00000429557.7	994	7	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_6	38.8776571081929	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGATGGGTGTTTTGGG	8555	False	NA	NA	False	NA	NA	NA	82051434	82048552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293
transcript_62810.known	chr17	-	1078	6	FSM	ENSG00000169733.12	ENST00000578676.5	1078	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_5	41.9351880882869	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCCAGCACTTGCGCACC	22	True	NA	NA	False	NA	NA	NA	82051335	82048444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82050007_82050401_82050556_82050661_82050765_82051293
transcript_62811.known	chr17	-	2082	6	FSM	ENSG00000169733.12	ENST00000580953.5	2082	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	43.412440613262	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACGTGGCTCCTGTCTTA	8427	False	NA	-5	True	AGTAAA	-15	NA	82051562	82047905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82050556_82050661_82050765_82051293_82051343_82051499
transcript_62813.known	chr17	+	583	3	FSM	ENSG00000169727.13	ENST00000578168.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	778.5	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	32	False	NA	28	True	ATTAAA	-17	NA	82056523	82057470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82056551_82056628_82056767_82057052
transcript_62814.known	chr17	+	796	3	FSM	ENSG00000169727.13	ENST00000583486.1	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1537	junction_2	19	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	32	False	NA	28	True	ATTAAA	-17	NA	82056523	82057470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82056551_82056628_82056767_82056839
transcript_62815.known	chr17	+	1855	13	FSM	ENSG00000169727.13	ENST00000584460.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	522.785249090548	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	26	True	NA	21	True	ATTAAA	-10	NA	82051928	82057463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82051965_82053233_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_62817.known	chr17	-	1040	4	FSM	ENSG00000169718.18	ENST00000542088.2	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_2	119.736748280922	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGCAAAAGTGAACAATAAA	5028	False	NA	-45	True	NA	NA	NA	82060775	82057913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82058255_82058340_82058819_82059947_82060094_82060700
transcript_62818.nic	chr17	-	1638	4	ISM	ENSG00000176155.20	ENST00000389641.9	2997	17	-33	92843	-16	-5963	5prime_fragment	FALSE	canonical	3	32	junction_1	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCATTGAGTCTCGTTT	5	True	NA	NA	False	AAAAAG	-10	NA	82212846	82194312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_82195365_82198313_82198423_82201537_82201953_82212784
transcript_62820.known	chr17	-	513	2	FSM	ENSG00000176155.20	ENST00000584717.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGCGTTGTTTATCTG	-4	True	NA	-5	True	ATTAAA	-30	NA	82106375	82101459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82101867_82106269
transcript_62821.nnic	chr17	-	603	2	NNC	ENSG00000176155.20	novel	2997	17	NA	NA	1976	0	intron_retention	FALSE	canonical	3	7	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTGCTTGGCCTTAGCGT	8574	False	NA	-15	True	ATTAAA	-20	NA	82104399	82101469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_82101867_82104193
transcript_62822.known	chr17	-	2047	10	FSM	ENSG00000141551.15	ENST00000392334.6	2047	10	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_2	80.6603915526828	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	4	True	NA	17	True	AAGAAA	-2	NA	82273697	82244361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82244832_82245975_82246040_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_62823.known	chr17	-	3712	9	FSM	ENSG00000141551.15	ENST00000314028.11	3681	9	-31	0	-31	0	multi-exon	FALSE	canonical	3	189	junction_1	70.0204211284108	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCCCCTTTCCATGT	NA	False	NA	-15	True	AATAAA	-22	NA	82273731	82242666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82244832_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_62827.known	chr17	-	598	2	FSM	ENSG00000141551.15	ENST00000579308.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	295	False	NA	NA	False	NA	NA	NA	82273406	82265299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82265797_82273305
transcript_62830.known	chr17	-	1284	4	FSM	ENSG00000173762.8	ENST00000312648.8	1284	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.942809041582063	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGACTTCTGCATTTA	-1	True	NA	-7	True	AATAAA	-16	NA	82317608	82314872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82315432_82316194_82316410_82316666_82316982_82317413
transcript_62832.known	chr17	+	1935	2	FSM	ENSG00000182459.5	ENST00000333437.5	1935	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGTAAGTCATTCC	-2	True	NA	NA	False	CATAAA	-14	NA	82359246	82363775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82359286_82361879
transcript_62833.known	chr17	+	1820	13	FSM	ENSG00000169660.17	ENST00000577944.5	1820	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.2590189414164	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACACGTGAAGGGTTATT	302	False	NA	16	True	AATAAA	-16	NA	82418696	82442641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441071_82441152_82441267_82441799_82441890_82442176
transcript_62836.known	chr17	-	841	8	FSM	ENSG00000178927.18	ENST00000578919.5	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	110.091798430367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGTGCACCGCCCACA	-39	True	NA	NA	False	NA	NA	NA	82450776	82443891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450699
transcript_62841.known	chr17	-	2073	7	FSM	ENSG00000178927.18	ENST00000306645.10	2073	7	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_6	46.4925322557887	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGTCTCCCTGTGCTGCT	-15	True	NA	-5	True	NA	NA	NA	82450752	82442585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_62844.known	chr17	-	866	7	FSM	ENSG00000178927.18	ENST00000583617.5	866	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	102.009803450453	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGGGGTGAACATCCAG	20	True	NA	NA	False	NA	NA	NA	82450717	82443455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82443823_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_62846.known	chr17	-	2050	6	FSM	ENSG00000178927.18	ENST00000434650.6	2050	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	108.811028852778	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	7938	False	NA	-6	True	CATAAA	-17	NA	82450829	82442643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82449169_82449293_82450699
transcript_62847.known	chr17	-	1965	6	FSM	ENSG00000178927.18	ENST00000584024.5	1965	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	107.296971066289	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-39	True	NA	-6	True	CATAAA	-17	NA	82450776	82442643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82447579_82447622_82449169_82449293_82450699
transcript_62854.known	chr17	+	742	2	FSM	ENSG00000169660.17	ENST00000583978.5	742	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACGATCACCAGAAGCTAG	278	False	NA	NA	False	NA	NA	NA	82418672	82420422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82418741_82419748
transcript_62855.known	chr17	+	1760	13	NNC	ENSG00000141562.19	novel	1722	12	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	287.252888971064	585	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTACTTTGGTTTCT	464	False	NA	23	True	ATTAAA	-21	NA	82458663	82488265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82481812_82481836_82483186_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_62857.known	chr17	+	1668	12	FSM	ENSG00000141562.19	ENST00000457415.7	1668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	272.825648923894	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCTGCCCTGAGTG	-2	True	NA	-27	True	NA	NA	NA	82458702	82488215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82480406_82480545_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_62859.known	chr17	+	1722	12	FSM	ENSG00000141562.19	ENST00000374611.9	1722	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	270.77171623722	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGATTACTTTGGTTT	-8	True	NA	21	True	ATTAAA	-19	NA	82458696	82488263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481219_82483173_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_62863.known	chr17	+	3814	11	FSM	ENSG00000141562.19	ENST00000309794.16	3814	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	188.424414553953	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGAATGGTTGAGTG	0	True	NA	20	True	AATAAA	-14	NA	82458740	82490537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_62871.known	chr17	+	2598	10	FSM	ENSG00000141562.19	ENST00000577812.5	2598	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.584434882943	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCAATGGATTACTTTG	7	True	NA	17	True	ATTAAA	-15	NA	82458711	82488259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82484951_82485496_82485655_82487915
transcript_62878.known	chr17	+	1487	10	FSM	ENSG00000141562.19	ENST00000345415.11	1487	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	191.611876226687	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGATTACTTTGGTT	449	False	NA	20	True	ATTAAA	-18	NA	82458648	82488262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_62885.known	chr17	-	357	3	FSM	ENSG00000265458.2	ENST00000579095.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATTTTTGGTGGAGA	-2	True	NA	NA	False	NA	NA	NA	82458521	82454272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82454414_82457437_82457549_82458416
transcript_62886.known	chr17	+	866	8	FSM	ENSG00000141562.19	ENST00000577432.5	866	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	281.138937254903	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGCTGTTCAACGAGGA	19	False	NA	NA	False	NA	NA	NA	82458723	82484900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82478799_82478919_82481081_82481212_82483715_82483780_82484812
transcript_62887.known	chr17	+	525	5	FSM	ENSG00000141562.19	ENST00000584411.5	525	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	319.07718501955	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGAATTCGTGCGTC	6	True	NA	NA	False	NA	NA	NA	82458710	82472618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459999_82460073_82464286_82464431_82468763_82468897_82472563
transcript_62888.known	chr17	-	2496	10	FSM	ENSG00000141580.16	ENST00000392325.9	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_8	40.342362013639	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTAGAATTGTGTGT	-5	True	NA	-4	True	AATAAA	-34	NA	82648444	82614561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_62889.known	chr17	-	704	6	FSM	ENSG00000141542.11	ENST00000538809.6	704	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.6079340099796	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGCCCCCCCAAAAACTG	21	True	NA	NA	False	NA	NA	NA	82698662	82657910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82658135_82658490_82658563_82659579_82659658_82660986_82661048_82664495_82664557_82698454
transcript_62890.known	chr17	-	3829	6	FSM	ENSG00000141542.11	ENST00000571995.6	3829	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	4.17612260356422	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTTTGTCATTTTCT	-15	True	NA	NA	False	ATTAAA	-6	NA	82698698	82654972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82698454
transcript_62891.known	chr17	-	2189	7	FSM	ENSG00000141542.11	ENST00000269347.10	2189	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	13.7800177390629	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGCGACCGGTTCTTT	-4	True	NA	1	True	AATAAA	-26	NA	82698687	82657066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82696388_82696854_82698454
transcript_62892.known	chr17	-	898	2	FSM	ENSG00000263063.1	ENST00000574471.1	898	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGCGTTGATGAGTTC	NA	False	NA	NA	False	NA	NA	NA	82716255	82713907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82714117_82715566
transcript_62898.known	chr17	+	1822	6	FSM	ENSG00000141560.15	ENST00000269373.11	1822	6	0	0	0	0	multi-exon	TRUE	canonical	3	355	junction_4	16.5336021483523	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACAAGATTGTATATTTC	-23	True	NA	39	True	AATAAA	-45	NA	82716705	82728013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82716897_82718905_82719058_82720271_82720364_82722803_82722887_82726479_82726603_82726832
transcript_62903.known	chr17	+	627	4	FSM	ENSG00000141560.15	ENST00000573158.5	627	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	168.610662638979	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCATGAGGAATCTGG	58	False	NA	NA	False	NA	NA	NA	82716786	82727143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82716897_82722803_82722887_82726479_82726603_82726832
transcript_62905.known	chr17	+	1393	6	FSM	ENSG00000167363.14	ENST00000300784.8	1393	6	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_5	5.27636238330917	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCTGCGCCTCGTTCCTCC	20	True	NA	12	True	AATAAA	-24	NA	82735614	82751196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82735778_82738488_82738641_82740762_82740855_82741310_82741394_82748854_82748978_82750416
transcript_62907.known	chr17	+	684	5	FSM	ENSG00000141556.22	ENST00000576432.5	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	22.0836477965032	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCCTTTTGTCTCTG	NA	False	NA	23	True	TATAAA	-16	NA	82937215	82942704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_62908.known	chr17	-	1383	13	FSM	ENSG00000175711.9	ENST00000320865.4	2985	13	-40	1642	-1	0	multi-exon	TRUE	canonical	3	39	junction_5	7.70777024970401	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-19	True	NA	-5	True	AATAAA	-21	NA	83051810	82943790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
transcript_62909.known	chr17	-	471	3	FSM	ENSG00000175711.9	ENST00000573363.5	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	NA	False	NA	-5	True	AATAAA	-21	NA	82956801	82943790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82944050_82946878_82946984_82956694
transcript_6291.known	chr1	-	3482	8	FSM	ENSG00000142864.15	ENST00000370995.6	3482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	1147.13107981857	4959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATCAAATAGGATC	31	False	NA	-32	True	AATAAA	-34	NA	67430386	67411037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_62910.known	chr17	+	1690	4	FSM	ENSG00000176845.13	ENST00000320095.12	1690	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	4.54606056566195	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGCCGGAGTCTGTC	-1	True	NA	8	True	AATAAA	-17	NA	83079608	83095122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_83079986_83084937_83085324_83093166_83093227_83094255
transcript_62914.known	chr18	+	4972	16	FSM	ENSG00000101557.15	ENST00000261601.8	4972	16	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_3	53.2413373235496	522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTCTCATTGTCATT	2	True	NA	10	True	AATAAA	-22	NA	158556	214629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_62918.known	chr18	-	2277	20	FSM	ENSG00000079134.13	ENST00000579232.5	2277	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	98.6538198818744	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	22	True	NA	-15	True	AATAAA	-15	NA	268019	214519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_62919.known	chr18	-	2108	21	FSM	ENSG00000079134.13	ENST00000261600.11	2108	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	96.9287753971957	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-6	True	NA	-15	True	AATAAA	-15	NA	268047	214519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_6292.known	chr1	-	1621	8	FSM	ENSG00000142864.15	ENST00000370990.5	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_4	1128.55848093839	4267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	45	False	NA	NA	False	AATATA	-24	NA	67430372	67412866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_62920.known	chr18	-	751	2	FSM	ENSG00000079134.13	ENST00000577429.5	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTACAGTCGGCTGG	NA	False	NA	-16	True	AATAAA	-14	NA	215778	214520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_214922_215428
transcript_62921.known	chr18	-	1811	12	FSM	ENSG00000079134.13	ENST00000582313.5	1811	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	110.866907029917	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGACATAGATGAACAAAG	14	True	NA	NA	False	ATTAAA	-8	NA	268027	244947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_245833_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_62922.known	chr18	-	552	3	FSM	ENSG00000079134.13	ENST00000580870.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCATTCCCTCATTTTCC	22	True	NA	NA	False	NA	NA	NA	268019	264939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_265364_265456_265531_267965
transcript_62923.known	chr18	+	2131	1	FSM	ENSG00000263884.1	ENST00000581677.1	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATTTAATTCAGAA	37	False	NA	NA	False	ATTAAA	-19	NA	268147	270278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_268100_270300
transcript_62925.known	chr18	-	5724	10	FSM	ENSG00000158270.12	ENST00000400256.5	5724	10	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	114.775142488839	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGTTCAACAACTCGTT	19	True	NA	-9	True	AATAAA	-24	NA	500701	316736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_320065_321661_321808_331667_331778_333006_333144_334741_335231_346294_347342_348064_348164_357399_357523_480706_480758_500507
transcript_6293.known	chr1	+	1352	4	FSM	ENSG00000116717.13	ENST00000370986.9	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	12.2836838484589	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTGTGTGCTCTTG	1	True	NA	14	True	AATAAA	-22	NA	67685200	67688334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_67685539_67686024_67686127_67686349_67686588_67687660
transcript_62930.known	chr18	-	4188	16	FSM	ENSG00000132199.20	ENST00000383578.7	4188	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	28.5574664297954	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCACAGTGGCTCATGCC	-13	True	NA	NA	False	ATTAAA	-18	NA	712662	670323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_673077_674160_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_706469_706579_712503
transcript_62933.known	chr18	-	5362	16	FSM	ENSG00000132199.20	ENST00000647584.2	5362	16	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_11	17.8093608344975	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	19	True	NA	NA	False	ATTAAA	-24	NA	712630	670317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_62939.known	chr18	-	1845	15	FSM	ENSG00000132199.20	ENST00000340116.12	1845	15	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_14	29.4847764247302	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGCAACGAAGGGAAAAAT	6080	False	NA	-14	True	AATAAA	-30	NA	712593	673899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712359
transcript_6295.known	chr1	+	902	3	FSM	ENSG00000116717.13	ENST00000370985.4	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	92.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAAAATAAGTCAAAAG	1	True	NA	43	True	AATGAA	-19	NA	67685200	67687986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_67685539_67686349_67686588_67687660
transcript_62953.known	chr18	-	1397	13	FSM	ENSG00000132199.20	ENST00000580982.5	1397	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	34.2226167906547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGCACCTAGACATTA	6058	False	NA	-56	True	NA	NA	NA	712615	674039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_693881_693909_694247_694335_706469_706579_712503
transcript_62961.known	chr18	+	1613	7	FSM	ENSG00000176890.16	ENST00000323274.15	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_3	49.5210392998101	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	-31	True	NA	104	True	ATTAAA	-19	NA	657652	673578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_657948_659640_659715_662145_662321_669071_669174_670691_670868_671379_671452_672859
transcript_62964.known	chr18	+	1327	6	FSM	ENSG00000176890.16	ENST00000323224.7	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	260.788496678822	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCATTCGTCCACGC	5	False	NA	10	True	AATAAA	-5	NA	657742	673484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_657948_659640_659715_662145_662321_670691_670868_671379_671452_672859
transcript_62966.nic	chr18	-	1040	5	ISM	ENSG00000132199.20	ENST00000580605.5	699	6	-33	398	5	-398	5prime_fragment	FALSE	canonical	3	66	junction_4	4.7169905660283	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTATCCAGTCACTTTG	6	True	NA	NA	False	AAAAAG	-12	NA	712643	693320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_693909_694247_694335_697239_697356_706469_706579_712503
transcript_62971.nnic	chr18	-	516	2	FSM	ENSG00000176912.6	ENST00000688642.1	487	2	-29	0	-29	0	multi-exon	FALSE	canonical	3	38	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	649	False	NA	-9	True	AATAAA	-20	NA	657624	649619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_649965_657453
transcript_62972.known	chr18	-	844	2	FSM	ENSG00000176912.6	ENST00000323813.4	991	2	0	147	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	NA	False	NA	-9	True	AATAAA	-20	NA	658340	649619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_649965_657841
transcript_62973.nnic	chr18	-	621	2	FSM	ENSG00000176912.6	ENST00000688530.1	586	2	-37	2	12	0	multi-exon	FALSE	canonical	3	46	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	NA	False	NA	-9	True	AATAAA	-20	NA	658328	649619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_649965_658052
transcript_62974.nnic	chr18	-	298	2	FSM	ENSG00000176912.6	ENST00000688642.1	487	2	-29	218	-29	-218	multi-exon	FALSE	canonical	3	38	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTATTTTTTCTTGGAGTA	649	False	NA	NA	False	AATAAA	-16	NA	657624	649837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_649965_657453
transcript_62976.nnic	chr18	-	457	2	FSM	ENSG00000176912.6	ENST00000688530.1	586	2	-94	223	-45	-221	multi-exon	FALSE	canonical	3	46	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTATTTTTTCTTGGA	NA	False	NA	NA	False	AATAAA	-13	NA	658385	649840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_649965_658052
transcript_62978.known	chr18	+	483	1	FSM	ENSG00000273355.1	ENST00000610185.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGCCTTTCTTCACTA	818	False	NA	6	True	ATTAAA	-17	NA	813273	813756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_813300_813800
transcript_62979.known	chr18	+	232	1	FSM	ENSG00000266575.1	ENST00000584794.1	232	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGACTGGAAGCTGCAC	NA	False	NA	NA	False	NA	NA	NA	832237	832469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_832200_832500
transcript_62987.known	chr18	-	657	3	FSM	ENSG00000272461.1	ENST00000606879.1	657	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAATCCA	NA	False	NA	NA	False	NA	NA	NA	976883	962591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_962956_963109_963263_976743
transcript_6299.known	chr1	-	4395	4	FSM	ENSG00000172380.6	ENST00000370982.4	4395	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	8.05536398239638	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTCCCCTTTCCCTT	-5	True	NA	-25	True	AATAAA	-15	NA	67833467	67701474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_67705577_67707593_67707713_67777457_67777508_67833343
transcript_62990.nnic	chr18	-	572	2	NIC	ENSG00000272461.1	novel	657	3	NA	NA	-4	64	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTTGGTGGATTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	976887	962527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_962956_976743
transcript_62991.nnic	chr18	-	538	2	NNC	ENSG00000272461.1	novel	657	3	NA	NA	-14	64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTTGGTGGATTTTTCT	NA	False	NA	NA	False	AATAAA	-16	NA	976897	962527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_962956_976787
transcript_63.known	ERCC-00148	+	478	1	FSM	ERCC-00148A	DQ883642	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00148_+_0_500
transcript_63005.known	chr18	-	3684	9	FSM	ENSG00000101574.15	ENST00000574538.2	3684	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	15.7619002661481	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-28	True	NA	-4	True	ATTAAA	-22	NA	2571505	2537529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
transcript_63011.known	chr18	-	3601	8	FSM	ENSG00000101574.15	ENST00000319888.10	3601	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.3119832167183	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTCTTTCCAGCTTC	-32	True	NA	1	True	ATTAAA	-27	NA	2571509	2537524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_2539146_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
transcript_63024.known	chr18	+	2126	17	FSM	ENSG00000080986.13	ENST00000261597.9	2126	17	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	34.6517834137004	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCTCATTTCTTA	7	True	NA	NA	False	AATAAA	-20	NA	2571556	2616635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414_2606508_2608699_2608831_2610758_2610862_2616436
transcript_63039.nic	chr18	+	1051	9	ISM	ENSG00000080986.13	ENST00000261597.9	2126	17	-50	27330	-50	6426	5prime_fragment	FALSE	canonical	3	304	junction_3	27.9013328534678	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCGGTTAGTAAACATGTT	NA	False	NA	NA	False	AAAAAG	-1	NA	2571506	2589305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203
transcript_63040.nic	chr18	+	1543	7	NIC	ENSG00000080986.13	novel	2126	17	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	117.264302610243	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCAGTCCTTATTACAG	NA	False	NA	NA	False	NA	NA	NA	2571506	2582879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2582101
transcript_63044.known	chr18	+	775	4	FSM	ENSG00000132205.11	ENST00000583776.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	1.24721912892465	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGCGTGGCCCAGCTG	321	False	NA	NA	False	NA	NA	NA	2906568	2913162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_2907086_2908942_2908976_2909690_2909820_2913066
transcript_63057.known	chr18	+	1004	5	FSM	ENSG00000101608.13	ENST00000578611.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1842.94804593076	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATTAAACTTTATGATA	-9	True	NA	-11	True	AATATA	-40	NA	3247812	3256211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247910_3249360_3249444_3253232_3253429_3253888_3254051_3255745
transcript_6306.known	chr1	-	1481	2	FSM	ENSG00000162595.8	ENST00000646789.1	1481	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTGTAAGAATTTGTCT	7	True	NA	NA	False	AATAAA	-18	NA	68050627	68045961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68047363_68050547
transcript_63062.known	chr18	+	947	4	FSM	ENSG00000101608.13	ENST00000579226.5	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1713.49979736082	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAATACTTACTTGTTT	5	True	NA	5	True	ATTAAA	-7	NA	3247480	3256227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247588_3253232_3253429_3253888_3254051_3255745
transcript_63069.known	chr18	+	1025	4	FSM	ENSG00000118680.14	ENST00000400175.9	1025	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	979.424661046814	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	36	False	NA	39	True	AATAAA	-28	NA	3262612	3278284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3262757_3272883_3273083_3277252_3277415_3277764
transcript_6307.known	chr1	-	2332	11	FSM	ENSG00000116729.14	ENST00000370976.7	2332	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	23.3814028663808	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTGCTTAAAATGCGTT	6	True	NA	-18	True	ATTAAA	-30	NA	68232544	68125491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68232193
transcript_63070.known	chr18	+	1249	4	FSM	ENSG00000118680.14	ENST00000581193.5	1249	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1035.7956683954	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	168	False	NA	39	True	AATAAA	-28	NA	3262416	3278284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3262785_3272883_3273083_3277252_3277415_3277764
transcript_63073.known	chr18	-	725	3	FSM	ENSG00000264235.6	ENST00000581905.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGCCTTACGGTTCCTT	-24	True	NA	NA	False	AATAAA	-17	NA	3261850	3255435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_3255839_3256241_3256323_3261609
transcript_63074.known	chr18	+	614	2	FSM	ENSG00000101608.13	ENST00000585090.1	614	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGACTCGACTTTATG	39	True	NA	NA	False	AATAAA	-21	NA	3247860	3249925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247910_3249360
transcript_63075.known	chr18	+	738	1	FSM	ENSG00000101608.13	ENST00000608786.1	738	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATTTGTTTCATGTTC	85	False	NA	15	True	AATAAA	-21	NA	3247906	3248644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247900_3248600
transcript_63076.known	chr18	+	958	4	FSM	ENSG00000101608.13	ENST00000217652.8	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	3449	junction_1	180.691880159446	24430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTGTTTAAACTTCTT	-21	True	NA	14	True	ATTAAA	-16	NA	3247800	3256236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247910_3253232_3253429_3253888_3254051_3255745
transcript_63077.known	chr18	+	1163	4	FSM	ENSG00000118680.14	ENST00000237500.10	1163	4	0	0	0	0	multi-exon	FALSE	canonical	3	2087	junction_2	84.2588603979163	12716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGCTTCTAGTCAGATG	-5	True	NA	NA	False	AGTAAA	-21	NA	3262132	3278461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3262238_3272883_3273083_3277252_3277415_3277764
transcript_63078.known	chr18	+	1064	4	FSM	ENSG00000118680.14	ENST00000584539.1	1064	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1035.7956683954	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	254	False	NA	39	True	AATAAA	-28	NA	3262955	3278284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3263139_3272883_3273083_3277252_3277415_3277764
transcript_63080.known	chr18	+	1670	4	FSM	ENSG00000177426.22	ENST00000401449.5	1670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	826.372124946679	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	327	False	NA	68	True	AATAAA	-12	NA	3411926	3458406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3412255_3418142_3418216_3456353_3456581_3457364
transcript_63081.known	chr18	+	1585	4	FSM	ENSG00000177426.22	ENST00000407501.6	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	732.837559687608	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	39	False	NA	11	True	AATAAA	-23	NA	3449881	3458349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3450071_3450321_3450506_3456353_3456581_3457364
transcript_63087.known	chr18	+	3030	3	FSM	ENSG00000177426.22	ENST00000618001.4	3030	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	837	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	19	False	NA	NA	False	AATATA	-23	NA	3447608	3459978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3447798_3456353_3456581_3457364
transcript_63089.known	chr18	+	801	3	FSM	ENSG00000177426.22	ENST00000549780.5	801	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	853	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGGACCTCAACCAGGAC	29	False	NA	NA	False	AATACA	-35	NA	3448498	3457839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3448598_3456353_3456581_3457364
transcript_63097.known	chr18	+	563	3	FSM	ENSG00000177426.22	ENST00000549253.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGGGCCAAGATTTCTG	73	False	NA	NA	False	NA	NA	NA	3449412	3457456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3449657_3456353_3456581_3457364
transcript_631.nic	chr1	+	1708	6	ISM	ENSG00000228794.11	ENST00000691316.1	3092	7	-94	2805	0	0	5prime_fragment	FALSE	canonical	3	35	junction_2	27.8237308785145	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAGGTACAATAGCTA	762	False	NA	10	True	AATAAA	-12	NA	827597	854385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390
transcript_63100.known	chr18	+	1689	3	FSM	ENSG00000177426.22	ENST00000405385.7	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	852	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	22	False	NA	68	True	AATAAA	-12	NA	3449650	3458406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3450071_3456353_3456581_3457364
transcript_63102.known	chr18	+	1088	3	FSM	ENSG00000177426.22	ENST00000345133.9	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	862.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAAACAAAGGGTTTT	-1	True	NA	-88	True	TATAAA	-11	NA	3451669	3458123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3451772_3456353_3456581_3457364
transcript_63107.known	chr18	+	1980	3	FSM	ENSG00000177426.22	ENST00000330513.10	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	827	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTAATTCAGAGTATT	6	True	NA	73	True	AATAAA	-17	NA	3451676	3458411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3452383_3456353_3456581_3457364
transcript_6311.known	chr1	-	2037	12	FSM	ENSG00000116729.14	ENST00000354777.6	2037	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	25.3908293459673	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTCTCTTACATCCA	5	True	NA	-15	True	AATAAA	-17	NA	68232545	68098472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68098754_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194222_68232193
transcript_63111.known	chr18	+	729	3	FSM	ENSG00000177426.22	ENST00000577543.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	564.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCGGGATCAGTTTTGGC	37	False	NA	NA	False	NA	NA	NA	3450211	3457604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3450506_3456353_3456581_3457396
transcript_63112.nnic	chr18	+	382	3	NNC	ENSG00000266835.6	novel	623	4	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	-13	True	NA	3	True	AATAAA	-19	NA	3466275	3478978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_3466358_3467126_3467204_3478755
transcript_63113.nnic	chr18	+	683	3	NIC	ENSG00000266835.6	novel	623	4	NA	NA	-208	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	0.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	4185	False	NA	3	True	AATAAA	-19	NA	3466041	3478978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_3466358_3467126_3467271_3478755
transcript_63114.known	chr18	+	450	3	FSM	ENSG00000266835.6	ENST00000581442.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAACTTGGCACTTAG	4393	False	NA	-48	True	CATAAA	-35	NA	3466249	3478927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3466358_3467126_3467297_3478755
transcript_63115.known	chr18	+	643	4	FSM	ENSG00000266835.6	ENST00000579007.5	643	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	8	True	NA	3	True	AATAAA	-19	NA	3466296	3478978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3466358_3467126_3467297_3473953_3474143_3478755
transcript_63116.known	chr18	+	613	3	FSM	ENSG00000266835.6	ENST00000581029.5	613	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGGCTGTTCCCTCAT	4393	False	NA	NA	False	AATAAA	-23	NA	3466249	3473203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3466358_3467126_3467271_3472842
transcript_6312.known	chr1	-	2716	12	FSM	ENSG00000116729.14	ENST00000262348.9	2716	12	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	7.99379924981113	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGCGTGCAGATTAT	-1	True	NA	-3	True	NA	NA	NA	68232523	68125359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_63121.nic	chr18	-	435	3	NIC	ENSG00000170579.17	novel	345	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	15.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTAAATCAAAATAAAAT	NA	False	NA	NA	False	TTTAAA	-10	NA	4151290	3986416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_3986655_4005115_4005202_4151179
transcript_63123.known	chr18	-	285	2	FSM	ENSG00000170579.17	ENST00000578250.6	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATTTCAAAGTAAAAGG	NA	False	NA	NA	False	ATTAAA	-34	NA	4151287	4005024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_4005202_4151179
transcript_63124.known	chr18	-	3525	12	FSM	ENSG00000170579.17	ENST00000581527.5	3525	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	2.94859540731397	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTGGAAGGAACTGCC	1	True	NA	-9	True	ATTAAA	-20	NA	4455266	3502218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
transcript_63125.known	chr18	+	501	4	FSM	ENSG00000177337.9	ENST00000573355.3	543	4	42	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	13.8884444373331	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGGGGTAGCTGGTTG	20	True	NA	21	True	AATAAA	-27	NA	3594111	3597385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3594241_3594419_3594485_3596578_3596676_3597175
transcript_63126.nnic	chr18	+	775	4	NNC	ENSG00000177337.9	novel	543	4	NA	NA	53	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	15.2825245151302	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	NA	False	NA	8	True	AATAAA	-14	NA	3593784	3597372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_3594241_3594419_3594485_3596578_3596676_3597215
transcript_63127.known	chr18	+	1977	3	FSM	ENSG00000177337.9	ENST00000317114.3	1979	3	2	0	2	0	multi-exon	FALSE	canonical	3	29	junction_2	3	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATTCTGTCTC	11	True	NA	NA	False	NA	NA	NA	3594102	3598352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3594241_3594419_3594485_3596578
transcript_63129.known	chr18	+	391	3	FSM	ENSG00000177337.9	ENST00000576606.6	398	3	0	7	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	20	True	NA	8	True	AATAAA	-14	NA	3594111	3597372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3594241_3594419_3594485_3597175
transcript_6313.known	chr1	-	700	2	FSM	ENSG00000116729.14	ENST00000370971.1	700	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAGCAAACAATTATTG	-1	True	NA	NA	False	AATAAA	-17	NA	68232523	68193857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68194228_68232193
transcript_63131.known	chr18	+	408	3	FSM	ENSG00000177337.9	ENST00000574411.5	408	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	35	True	NA	8	True	AATAAA	-14	NA	3594126	3597372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3594241_3596578_3596676_3597175
transcript_63134.nic	chr18	+	966	2	ISM	ENSG00000177337.9	ENST00000574411.5	408	3	-58	0	-1	0	intron_retention	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	-23	True	NA	8	True	AATAAA	-14	NA	3594068	3597372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_3594241_3596578
transcript_63136.nnic	chr18	-	1217	3	NNC	ENSG00000266268.5	novel	561	5	NA	NA	-39	-194610	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTTACCTAACAT	NA	False	NA	NA	False	AATAAA	-21	NA	5004576	5002544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_5003290_5003974_5004004_5004133
transcript_63138.nnic	chr18	-	949	3	NNC	ENSG00000266268.5	novel	561	5	NA	NA	-119	-194610	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	3	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTTACCTAACAT	NA	False	NA	NA	False	AATAAA	-21	NA	5004656	5002544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_5003290_5003974_5004004_5004481
transcript_6314.known	chr1	-	582	1	FSM	ENSG00000229133.1	ENST00000444127.1	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAAAATGACTAAATA	44	False	NA	NA	False	NA	NA	NA	68243055	68242473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68242500_68243100
transcript_63142.known	chr18	+	4548	4	FSM	ENSG00000263753.9	ENST00000665442.1	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	4.78423336480244	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAATAGGTACTCAAAAC	19	True	NA	0	True	ATTAAA	-19	NA	5238119	5246489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5240647_5241256_5241698_5241813_5243593
transcript_63143.known	chr18	+	4669	4	FSM	ENSG00000263753.9	ENST00000656810.1	4669	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	20.8326666559997	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTACTCAAAACTCATG	-20	True	NA	5	True	ATTAAA	-24	NA	5238080	5246494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5240647_5241256_5241698_5241890_5243593
transcript_63145.known	chr18	-	825	4	FSM	ENSG00000198081.11	ENST00000582388.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	57.5750717662504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGAGACCCCAGAATC	5	True	NA	NA	False	NA	NA	NA	5295702	5291544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295651
transcript_63146.known	chr18	-	3528	4	FSM	ENSG00000198081.11	ENST00000357006.8	3528	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	49.7482551341139	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTTTCATTTTTTCA	-16	True	NA	-2	True	TATAAA	-20	NA	5296040	5289018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295812
transcript_63149.known	chr18	+	4017	3	FSM	ENSG00000263753.9	ENST00000582008.6	4017	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	19	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGACTTTCTAGTTATT	-39	True	NA	19	True	ATTAAA	-38	NA	5238061	5246508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5241698_5241813_5243593
transcript_6315.known	chr1	-	5299	12	FSM	ENSG00000024526.17	ENST00000456315.7	5299	12	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_5	24.7726855712743	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-7	True	NA	-9	True	ATTAAA	-17	NA	68497082	68474151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_63152.known	chr18	+	1612	3	FSM	ENSG00000263753.9	ENST00000669574.2	1620	3	8	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	29.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGAGAGGTGCTTACTGG	-26	True	NA	NA	False	AATAAA	-10	NA	5238074	5290608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5241698_5241813_5290085
transcript_63153.known	chr18	+	4461	3	FSM	ENSG00000263753.9	ENST00000657250.1	4461	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	0.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTTTCAGCTACCTC	-39	True	NA	NA	False	NA	NA	NA	5238061	5246875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5241698_5241890_5243593
transcript_63156.known	chr18	+	1426	3	FSM	ENSG00000263753.9	ENST00000662359.1	1426	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	28.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATTTCCAGAACTTTT	-32	True	NA	NA	False	TATAAA	-32	NA	5238068	5290339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5241698_5241890_5290085
transcript_63157.known	chr18	+	2516	3	FSM	ENSG00000263753.9	ENST00000654155.1	2516	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTAAAGACAGTAAGAACA	-32	True	NA	-11	True	NA	NA	NA	5238068	5245170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5238894_5241698_5241813_5243593
transcript_63158.known	chr18	+	4199	3	FSM	ENSG00000263753.9	ENST00000666950.1	4199	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	26.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACATTGCAAATACAAAAAA	-20	True	NA	NA	False	ATTAAA	-29	NA	5238080	5246788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5238894_5241698_5241890_5243593
transcript_63159.known	chr18	-	1814	3	FSM	ENSG00000198081.11	ENST00000400143.7	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	40	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTGGGACAGGGACAC	707	False	NA	NA	False	NA	NA	NA	5296195	5290857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_5292205_5293243_5293328_5295812
transcript_63161.known	chr18	+	2034	1	FSM	ENSG00000263753.9	ENST00000581471.2	2034	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCCAGTTAGTATT	NA	False	NA	NA	False	AATAAA	-19	NA	5237825	5239859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5237800_5239900
transcript_63163.known	chr18	-	3549	19	FSM	ENSG00000154655.16	ENST00000317931.12	3549	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.58022301426107	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACCTCACTACCTTAA	3	True	NA	NA	False	AATAAA	-15	NA	6414911	5954716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_5956388_5960093_5960157_5969392_5969563_6080880_6080952_6093354_6093529_6138193_6138297_6171827_6171943_6213148_6213260_6215749_6215836_6237963_6238041_6239717_6239873_6241357_6241450_6243293_6243430_6244483_6244589_6263946_6264039_6301902_6301958_6311553_6311657_6311997_6312057_6414800
transcript_63166.nnic	chr18	-	784	2	NNC	ENSG00000235552.5	novel	748	2	NA	NA	0	56	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26854	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGACAGGATTGAGGG	0	True	NA	NA	False	ATTAAA	-35	NA	6463030	6462087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_6462774_6462932
transcript_63167.known	chr18	-	748	2	FSM	ENSG00000235552.5	ENST00000583065.1	748	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTAAATGTCTTAAGAA	15	False	NA	NA	False	NA	NA	NA	6463015	6462151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6462817_6462932
transcript_63168.known	chr18	-	867	1	FSM	ENSG00000235552.5	ENST00000489915.1	867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55515	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	20	False	NA	NA	False	NA	NA	NA	6463010	6462143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6462100_6463000
transcript_63171.nnic	chr18	+	1281	3	FSM	ENSG00000265174.2	ENST00000684855.1	765	3	-30	-486	-30	486	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGGCTAGATCAATAC	401	False	NA	NA	False	ATTAAA	-16	NA	6558107	6569398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_6558403_6558549_6558670_6568532
transcript_63174.known	chr18	-	491	2	FSM	ENSG00000266441.1	ENST00000577327.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCACATTAACAGATACC	NA	False	NA	79	True	NA	NA	NA	6729862	6728820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6729169_6729719
transcript_63176.known	chr18	-	545	4	FSM	ENSG00000265933.5	ENST00000578497.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGATTCATTTAGT	NA	False	NA	NA	False	AATACA	-43	NA	6929962	6927305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6927585_6928119_6928220_6928850_6928969_6929914
transcript_63178.known	chr18	-	9642	63	FSM	ENSG00000101680.16	ENST00000389658.4	9642	63	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_41	64.8763431949394	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAAGCCTTTTATTTCT	2	True	NA	-2	True	AATACA	-18	NA	7117797	6941741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956635_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
transcript_63185.known	chr18	+	4640	17	FSM	ENSG00000173482.17	ENST00000577827.5	4640	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	22.8633850293433	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTATGAGTCGTCGT	NA	False	NA	10	True	GATAAA	-18	NA	8121851	8406666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_8122317_8143646_8143780_8244057_8244210_8247844_8247920_8296367_8296456_8314780_8314858_8319177_8319215_8343422_8343521_8370889_8371007_8376045_8376201_8376461_8378415_8379166_8379341_8380295_8380428_8384560_8384687_8387071_8387236_8394475_8394612_8406108
transcript_63189.known	chr18	+	3963	10	FSM	ENSG00000168502.17	ENST00000518815.1	3963	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.0537506138611	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTCTCGGTCTCTCATT	76	False	NA	9	True	AATAAA	-18	NA	8789673	8832778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_8789723_8796231_8796463_8798096_8798292_8806892_8807061_8809447_8809562_8812978_8813234_8819046_8819260_8821466_8821499_8824698_8826233_8831606
transcript_63190.known	chr18	-	818	2	FSM	ENSG00000265962.2	ENST00000579368.2	896	2	78	0	78	0	multi-exon	FALSE	canonical	3	9	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTAAAATTATTGT	36	False	NA	NA	False	AATAAA	-15	NA	8707621	8695855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_8696122_8707069
transcript_63203.known	chr18	+	1338	9	FSM	ENSG00000101745.17	ENST00000540578.6	1338	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	31.1729049015327	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATCAGACTTTAATGG	-5	True	NA	16	True	AATAAA	-13	NA	9136804	9235820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9235637
transcript_63204.known	chr18	+	390	2	FSM	ENSG00000101745.17	ENST00000577992.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGACAGTGACAGCA	-14	True	NA	NA	False	NA	NA	NA	9136795	9182470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9137097_9182381
transcript_6321.known	chr1	-	4586	11	FSM	ENSG00000024526.17	ENST00000370966.9	4586	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	65.0984638835664	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	NA	False	NA	-9	True	ATTAAA	-17	NA	68497221	68474151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_63223.known	chr18	-	770	4	FSM	ENSG00000266053.3	ENST00000582375.2	856	4	0	86	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGTTGTAAGGTTA	1019	False	NA	NA	False	AATAAA	-20	NA	9136645	9121264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9121457_9132222_9132399_9133390_9133511_9136363
transcript_63226.known	chr18	+	868	2	FSM	ENSG00000178127.13	ENST00000497577.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATAACTGTTTTCTG	-18	True	NA	NA	False	NA	NA	NA	9102694	9103856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9102798_9103091
transcript_63228.known	chr18	-	779	1	FSM	ENSG00000266053.3	ENST00000608008.1	779	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTCCTGATTTCTCC	1173	False	NA	0	True	ATTAAA	-20	NA	9136491	9135712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9135700_9136500
transcript_63229.known	chr18	+	857	8	FSM	ENSG00000178127.13	ENST00000318388.11	857	8	0	0	0	0	multi-exon	FALSE	canonical	3	3513	junction_2	236.182565151691	11539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTATTCTGCTC	-14	True	NA	24	True	AATAAA	-25	NA	9102698	9134341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185
transcript_63230.nnic	chr18	-	1039	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-55	-7986	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	7	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGCATTGCTGTATC	322	False	NA	NA	False	AATAAA	-18	NA	9334500	9318507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_9319088_9322057_9322153_9334136
transcript_63231.nnic	chr18	-	1068	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-55	-7986	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGCATTGCTGTATC	322	False	NA	NA	False	AATAAA	-18	NA	9334500	9318507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_9319121_9322061_9322153_9334136
transcript_63232.nnic	chr18	-	1129	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-55	-7986	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	0.5	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGCATTGCTGTATC	322	False	NA	NA	False	AATAAA	-18	NA	9334500	9318507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_9319182_9322061_9322153_9334136
transcript_63233.nnic	chr18	-	954	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-55	-8100	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAACAATTTCTTTGTA	322	False	NA	2	True	AATAAA	-22	NA	9334500	9318621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_9319121_9322061_9322153_9334136
transcript_63235.nnic	chr18	-	1011	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-55	-8104	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	0.5	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTTTTAACAATTTCTT	322	False	NA	-2	True	AATAAA	-18	NA	9334500	9318625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_9319182_9322061_9322153_9334136
transcript_63238.known	chr18	+	3750	5	FSM	ENSG00000128791.12	ENST00000262120.10	3750	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	25.810608284192	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATATTTTTTGTTA	4	True	NA	10	True	AATAAA	-13	NA	9334772	9402420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279_9396547_9399345
transcript_63243.known	chr18	-	586	1	FSM	ENSG00000273335.1	ENST00000608162.1	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTGAATTTCTTTTAC	1806	False	NA	NA	False	ATTAAA	-21	NA	9474006	9473420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9473400_9474000
transcript_63244.known	chr18	+	4379	10	FSM	ENSG00000017797.13	ENST00000383432.8	4379	10	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_9	21.5240319321749	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	-22	True	NA	40	True	ATTAAA	-28	NA	9475512	9538114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9475692_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
transcript_63248.nic	chr18	+	677	3	ISM	ENSG00000017797.13	ENST00000019317.8	4368	10	-50	21110	-50	-154	5prime_fragment	FALSE	canonical	3	40	junction_1	241	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCATAAAGAAGAAAAGCACA	NA	False	NA	-65	True	AATAAA	-22	NA	9474958	9517004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_9475177_9512990_9513290_9516844
transcript_63251.known	chr18	+	3676	3	FSM	ENSG00000017797.13	ENST00000609094.2	3676	3	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	21	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTATTTTTGTGTTTT	65	False	NA	NA	False	AATAAA	-17	NA	9475669	9520199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9475692_9512990_9513290_9516844
transcript_63253.known	chr18	+	836	3	FSM	ENSG00000017797.13	ENST00000458039.3	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	238	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCAGCCGTTTTCCG	203	False	NA	NA	False	NA	NA	NA	9476126	9517221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9476287_9512990_9513290_9516844
transcript_63256.known	chr18	-	3885	20	FSM	ENSG00000154845.16	ENST00000400555.7	3885	20	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_18	29.3505888137174	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTCTCTGGAATCT	-18	True	NA	-1	True	ATTAAA	-22	NA	9614569	9546790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477
transcript_63258.known	chr18	-	3923	20	FSM	ENSG00000154845.16	ENST00000400556.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_18	33.4494284843251	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTTTCTCTGGAA	-8	True	NA	-4	True	ATTAAA	-19	NA	9614559	9546793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595154_9614225_9614271_9614477
transcript_6326.nic	chr1	-	2409	11	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-37	3644	-37	-899	5prime_fragment	FALSE	canonical	3	168	junction_4	24.5823107131937	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGGTAAGAGAATG	5	False	NA	NA	False	ATTAAA	-37	NA	68497119	68477795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_63267.known	chr18	-	481	3	FSM	ENSG00000154845.16	ENST00000577779.1	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	14	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACCTGCTGTATGACGG	2685	False	NA	NA	False	TATAAA	-43	NA	9614513	9594702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9595103_9614225_9614271_9614477
transcript_63270.known	chr18	-	379	4	FSM	ENSG00000154845.16	ENST00000581835.1	379	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	44.3946943776944	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGATCAGAATAATCAGGT	2911	False	NA	NA	False	NA	NA	NA	9614287	9588728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9588854_9593767_9593875_9595017_9595103_9614225
transcript_63271.known	chr18	-	378	2	FSM	ENSG00000154845.16	ENST00000580283.1	378	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTTCTTTGCAAAAAAAAA	-8	True	NA	NA	False	NA	NA	NA	9614274	9594824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9595154_9614225
transcript_63273.known	chr18	+	3919	7	FSM	ENSG00000168461.13	ENST00000578921.6	3919	7	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	21.505167337694	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTCTTTTTCTTATT	20	True	NA	21	True	AATAAA	-15	NA	9708300	9862551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_63276.known	chr18	+	783	6	FSM	ENSG00000168461.13	ENST00000578734.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	123.865087898084	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCAGGAAATGTACCTG	-6	True	NA	NA	False	NA	NA	NA	9708274	9859469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9708445_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_63278.known	chr18	+	1227	7	FSM	ENSG00000101558.14	ENST00000340541.4	1227	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	655.293996784819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACGGTTAGAAAACACAA	26	True	NA	NA	False	NA	NA	NA	9914061	9954358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9944923_9945059_9950394_9950569_9954052
transcript_63279.known	chr18	+	6801	6	FSM	ENSG00000101558.14	ENST00000400000.7	6801	6	0	0	0	0	multi-exon	FALSE	canonical	3	1356	junction_4	66.9525204902698	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGGGTGCTTTTGTG	-20	True	NA	NA	False	AATAAA	-14	NA	9914015	9960021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9950394_9950569_9954052
transcript_63282.known	chr18	+	917	3	FSM	ENSG00000101558.14	ENST00000577901.5	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	45.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAATGAGCTGGGTAT	16	True	NA	NA	False	AAAACA	-38	NA	9914051	9936589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9914336_9931809_9931963_9936109
transcript_63288.known	chr18	+	3559	12	FSM	ENSG00000134265.13	ENST00000322897.11	3559	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	23.9669193502314	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGTTCTTTGTATTA	-1	True	NA	NA	False	AATAAA	-18	NA	10526026	10552764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_63293.nic	chr18	+	764	9	ISM	ENSG00000134265.13	ENST00000322897.11	3559	12	-143	6400	-21	-4156	5prime_fragment	FALSE	canonical	3	192	junction_3	23.5156198089695	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATAAGGAAATTGAGA	NA	False	NA	NA	False	AAGAAA	-5	NA	10525883	10546364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325
transcript_63294.known	chr18	+	887	8	FSM	ENSG00000134265.13	ENST00000582978.5	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	24.715524328995	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTGACAAATAGTGTCA	25	True	NA	NA	False	CATAAA	-24	NA	10526101	10540779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328
transcript_63295.known	chr18	+	1516	8	FSM	ENSG00000134265.13	ENST00000580483.5	1516	8	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	84.2086815050344	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTATGAGTTTGAAAAA	4	True	NA	10	True	AATAAA	-20	NA	10525904	10550801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_10526159_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_63299.known	chr18	+	1038	8	FSM	ENSG00000141404.17	ENST00000602628.1	1038	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.8173672289039	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTGACTGCCAGCCC	4811	False	NA	NA	False	NA	NA	NA	11857439	11881172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11857786_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_63302.nic	chr18	+	1609	5	ISM	ENSG00000141404.17	ENST00000535121.5	1285	13	571	55393	-42	-7925	internal_fragment	FALSE	canonical	3	34	junction_1	36.2801598673435	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGAAAAGGACACT	-37	True	NA	NA	False	NA	NA	NA	11752042	11825742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917
transcript_63303.known	chr18	+	3032	1	FSM	ENSG00000255112.3	ENST00000526991.3	3032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	706	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGGATGTGAGTGTG	-4	True	NA	9	True	ATTAAA	-16	NA	11851412	11854444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11851400_11854400
transcript_63311.known	chr18	-	1636	8	FSM	ENSG00000154889.17	ENST00000309976.13	1636	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26.3647878962894	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGTGGTTCTCAAA	-5	True	NA	-8	True	AATAAA	-21	NA	11908350	11884052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11884628_11885675_11885817_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11908200
transcript_63312.known	chr18	-	1831	10	FSM	ENSG00000154889.17	ENST00000344987.11	1831	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	22.2660678562196	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTTTCCCTCTTCCTGT	340	False	NA	-23	True	AATAAA	-6	NA	11908330	11884067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_63313.known	chr18	-	379	3	FSM	ENSG00000154889.17	ENST00000593001.5	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	25	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTTGTCTTTGCTGTG	10	True	NA	NA	False	ATTAAA	-30	NA	11908301	11897185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11897357_11906202_11906310_11908200
transcript_63314.known	chr18	-	2324	9	FSM	ENSG00000154889.17	ENST00000317235.11	2324	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	25.4263642701822	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTCTTTTTGTTTTTTT	-4	True	NA	-24	True	AATAAA	-29	NA	11908349	11883470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11884628_11885675_11885817_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_63315.known	chr18	-	1568	9	FSM	ENSG00000154889.17	ENST00000589731.5	1568	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	23.1449238495183	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATATATAAATATAAG	-4	True	NA	NA	False	ATTAAA	-44	NA	11908315	11886114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11886622_11886712_11886782_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_63316.known	chr18	-	885	6	FSM	ENSG00000154889.17	ENST00000589267.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	32.012497559547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGACACCCAAGTCATG	304	False	NA	NA	False	NA	NA	NA	11908366	11889455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11889491_11893467_11893577_11896983_11897357_11897525_11897621_11906202_11906310_11908200
transcript_63324.nnic	chr18	-	1313	3	Antisense	novelGene_ENSG00000267661.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	3.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTCCTGAGTTCTGTGA	NA	False	NA	NA	False	AATAAA	-18	NA	11947776	11927374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_11928327_11946585_11946734_11947563
transcript_63331.known	chr18	+	923	8	FSM	ENSG00000141401.12	ENST00000589238.5	923	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	341.215354823529	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCTCGTGGCCCAC	11	False	NA	NA	False	NA	NA	NA	11981036	12030516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11981131_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_63334.nic	chr18	+	1401	8	NIC	ENSG00000141401.12	novel	923	8	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	338.443254822273	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	NA	False	NA	31	True	AATAAA	-14	NA	11980994	12030877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_11981206_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_63339.known	chr18	+	1449	8	FSM	ENSG00000141401.12	ENST00000269159.8	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_4	47.4956496396657	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	-5	True	NA	31	True	AATAAA	-14	NA	11981506	12030877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_63351.known	chr18	+	919	2	FSM	ENSG00000141401.12	ENST00000589374.1	919	2	0	0	0	0	multi-exon	FALSE	canonical	3	1039	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTGTATCTGTTTC	NA	False	NA	29	True	AATAAA	-12	NA	12028607	12030875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12028994_12030342
transcript_63353.known	chr18	+	807	3	FSM	ENSG00000267733.5	ENST00000586642.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTTGTTGACTCACATGAC	NA	False	NA	NA	False	ATTAAA	-37	NA	12208397	12212465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12208495_12209364_12209461_12211851
transcript_63355.known	chr18	+	1008	5	FSM	ENSG00000176194.18	ENST00000320477.10	1008	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGACACTTCCTGTG	0	True	NA	NA	False	AATAAA	-24	NA	12254360	12277595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12254422_12262824_12262970_12264306_12264454_12274092_12274275_12277122
transcript_63357.known	chr18	+	733	2	FSM	ENSG00000267069.2	ENST00000586226.2	884	2	45	106	45	-106	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTATTTTCTTCTCAC	11	False	NA	NA	False	NA	NA	NA	12288307	12291488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12288655_12291102
transcript_63358.known	chr18	-	3160	17	FSM	ENSG00000141385.12	ENST00000269143.8	3160	17	0	0	0	0	multi-exon	TRUE	canonical	3	591	junction_15	55.9637159238019	631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGTCCCTATTTATGC	5	True	NA	-1	True	AATAAA	-29	NA	12377227	12328943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
transcript_63359.known	chr18	+	485	3	FSM	ENSG00000176014.13	ENST00000591463.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	324.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCAGCTGGTGGAGAA	19	False	NA	NA	False	NA	NA	NA	12308262	12325353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12310942_12311054_12325066
transcript_6336.nic	chr1	-	1049	4	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-37	14425	-37	-1636	5prime_fragment	FALSE	canonical	3	192	junction_1	29.3371209675842	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTACTAGTCATATTCAT	5	False	NA	NA	False	AATAAA	-16	NA	68497119	68488576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_68489035_68489451_68489609_68494429_68494696_68496951
transcript_63362.known	chr18	+	1879	4	FSM	ENSG00000176014.13	ENST00000317702.10	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_2	53.160135440008	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTACTTGGGTCACT	-3	True	NA	33	True	CATAAA	-26	NA	12308240	12326616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12325066
transcript_63363.known	chr18	+	1017	4	FSM	ENSG00000176014.13	ENST00000591909.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	307.086307086461	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTATTCAGAAATATTAAT	-10	True	NA	15	True	ATTAAA	-18	NA	12308233	12329826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12329145
transcript_63364.known	chr18	+	580	6	FSM	ENSG00000141391.14	ENST00000587862.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9.94786409235671	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGATAATTGAACACTC	NA	False	NA	NA	False	NA	NA	NA	12420016	12429364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12420149_12420324_12420494_12421539_12421630_12427040_12427112_12427220_12427324_12429349
transcript_6337.nic	chr1	-	864	4	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-37	14610	-37	-1821	5prime_fragment	FALSE	canonical	3	192	junction_1	29.3371209675842	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCTAGTAGAGTAGAAATT	5	False	NA	NA	False	AATAAA	-14	NA	68497119	68488761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_68489035_68489451_68489609_68494429_68494696_68496951
transcript_63376.known	chr18	+	377	3	FSM	ENSG00000128789.21	ENST00000585853.2	377	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCCCAGGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	12658042	12663471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12658206_12658573_12658774_12663457
transcript_63379.known	chr18	+	471	2	FSM	ENSG00000128789.21	ENST00000400514.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGATTCATTTGTAACATT	-1	True	NA	NA	False	TATAAA	-39	NA	12658192	12658893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12658344_12658573
transcript_63381.known	chr18	-	720	1	FSM	ENSG00000267249.1	ENST00000585877.1	720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGTCTGGCATTAATATT	NA	False	NA	NA	False	AATAAA	-20	NA	12671145	12670425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12670400_12671100
transcript_63382.known	chr18	+	1070	7	FSM	ENSG00000128789.21	ENST00000317615.11	1070	7	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	19.5930826795808	7505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	6	True	NA	26	True	AATAAA	-19	NA	12703041	12725740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498_12724620_12725438
transcript_63383.known	chr18	+	1036	6	FSM	ENSG00000128789.21	ENST00000590217.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	21.3410402745508	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTAGATTAATTATGC	-13	True	NA	NA	False	AAAAAG	-33	NA	12703022	12724868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498
transcript_63388.known	chr18	-	1648	11	FSM	ENSG00000175354.20	ENST00000591115.5	1648	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_6	184.020216280712	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	-13	True	NA	-4	True	ATTAAA	-16	NA	12884214	12785480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12819213_12819283_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_63393.known	chr18	-	1706	10	FSM	ENSG00000175354.20	ENST00000327283.7	1706	10	0	0	0	0	multi-exon	TRUE	canonical	1	143	junction_7	103.454528688564	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGGTTTGTGTGCAT	179	False	NA	-1	True	ATTAAA	-19	NA	12884338	12785477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_63395.known	chr18	-	1326	10	FSM	ENSG00000175354.20	ENST00000645816.1	1326	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	195.298315657779	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTATATTGGCAACCTA	282	False	12884263	NA	False	AAAAAG	-7	NA	12884235	12794383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12821335_12821426_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_63401.known	chr18	-	3470	9	FSM	ENSG00000175354.20	ENST00000309660.10	3470	9	0	0	0	0	multi-exon	FALSE	canonical	1	143	junction_6	108.952326156902	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTGTCCTGATTCA	280	False	12884263	-3	True	ATTAAA	-17	NA	12884237	12792151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_6342.known	chr1	-	582	5	FSM	ENSG00000024526.17	ENST00000525124.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	80.529497701153	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTAAGTTAAATATATG	-7	True	NA	NA	False	NA	NA	NA	68497082	68486940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68496951
transcript_63420.known	chr18	-	1542	9	FSM	ENSG00000175354.20	ENST00000353319.8	1542	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	162.858019068758	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTTTTGTTGGTTTGTG	236	False	NA	-6	True	ATTAAA	-14	NA	12884281	12785482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12785845_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_63426.known	chr18	+	3494	9	FSM	ENSG00000085415.16	ENST00000262124.15	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_6	63.944189532748	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTTTTTGGTCTTTT	7	False	NA	27	True	AATAAA	-32	NA	12947994	12987536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_6343.known	chr1	+	1299	2	FSM	ENSG00000285407.1	ENST00000646995.1	1299	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCTCTCTCTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	68881576	68943452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_68882004_68942580
transcript_63439.known	chr18	+	582	4	FSM	ENSG00000085415.16	ENST00000585730.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	369.340854315721	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCCTGCTTTGGTTTTA	-16	True	NA	NA	False	AATATA	-15	NA	12948013	12971252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12948233_12951854_12951906_12963159_12963372_12971152
transcript_63441.known	chr18	+	6236	12	FSM	ENSG00000101654.18	ENST00000383314.7	6236	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	33.7607038428843	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	-10	True	NA	29	True	AATAAA	-20	NA	13726672	13764556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_63442.known	chr18	+	4108	12	FSM	ENSG00000101654.18	ENST00000592764.5	4108	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	43.2400564215502	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	21	True	NA	29	True	AATAAA	-20	NA	13726703	13764556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13762038
transcript_63446.known	chr18	+	1849	11	FSM	ENSG00000101654.18	ENST00000543302.6	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	26.0785352349399	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCCACAGTGTTCAGA	-23	True	NA	9	True	CATAAA	-31	NA	13726659	13760285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_63452.known	chr18	-	1091	4	FSM	ENSG00000177150.13	ENST00000592976.5	1091	4	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	6.94422221866655	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGAATAAGGTGCC	-31	True	NA	70	True	AAAAAG	-13	NA	13726586	13666493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_13666714_13671861_13671974_13681604_13682106_13726328
transcript_63453.nic	chr18	+	771	4	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-8	23178	-8	5286	5prime_fragment	FALSE	canonical	3	82	junction_1	25.381533094402	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTAACAAGCTAGT	-31	True	NA	NA	False	NA	NA	NA	13726651	13737107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009
transcript_63459.nic	chr18	+	572	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-40	32735	-27	0	5prime_fragment	FALSE	canonical	3	58	junction_1	11	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAGAAAAAGAGAA	50	False	NA	16	True	AAAAAG	-25	NA	13726632	13731821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_6346.known	chr1	+	549	6	FSM	ENSG00000287453.1	ENST00000662276.1	549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACTGTATCATACCCT	17	False	NA	NA	False	AATAAA	-29	NA	69551847	69563715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_69551944_69555417_69555466_69556935_69556994_69557779_69557937_69559738_69559820_69563606
transcript_63460.nic	chr18	+	653	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-40	32654	-27	81	5prime_fragment	FALSE	canonical	3	58	junction_1	11	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCACTTGAGGATGTTCCT	50	False	NA	97	True	GATAAA	-38	NA	13726632	13731902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_63461.known	chr18	+	572	3	FSM	ENSG00000101654.18	ENST00000591746.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	39	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAGAAAAAGAGAA	86	False	NA	16	True	AAAAAG	-25	NA	13726768	13731821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_13726866_13730626_13730756_13731475
transcript_63465.nic	chr18	+	503	2	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-72	28449	-72	15	5prime_fragment	FALSE	canonical	3	82	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTGAGGATGTTCCA	5	False	NA	31	True	AAAAAG	-40	NA	13726587	13731836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13731475
transcript_63466.nic	chr18	+	574	2	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-72	28378	-72	86	5prime_fragment	FALSE	canonical	3	82	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGGATGTTCCTGAAAA	5	False	NA	102	True	GATAAA	-43	NA	13726587	13731907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13731475
transcript_63467.known	chr18	-	321	1	FSM	ENSG00000243779.1	ENST00000494882.1	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATTATGAA	NA	False	NA	NA	False	NA	NA	NA	13919923	13919602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_13919600_13919900
transcript_63473.nnic	chr18	-	823	4	NNC	ENSG00000175322.12	novel	6760	3	NA	NA	-1	-52	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	24.3629956194955	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAATATTAGTAAACATC	NA	False	NA	1	True	AATAAA	-24	NA	14132491	14106045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_14106410_14108121_14108237_14124349_14124477_14132274
transcript_63474.known	chr18	-	6760	3	FSM	ENSG00000175322.12	ENST00000590202.3	6760	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	11.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-3	True	NA	-11	True	AATAAA	-26	NA	14132435	14099937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14106410_14124349_14124477_14132274
transcript_63475.known	chr18	-	661	3	FSM	ENSG00000175322.12	ENST00000587512.5	661	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGATATATCTATAT	3	True	NA	NA	False	NA	NA	NA	14132429	14121792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14122172_14124349_14124477_14132274
transcript_63478.known	chr18	-	2117	3	FSM	ENSG00000175322.12	ENST00000589498.5	2117	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	4	True	NA	-11	True	AATAAA	-26	NA	14132428	14099937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14101774_14124349_14124477_14132274
transcript_63481.known	chr18	-	599	2	FSM	ENSG00000175322.12	ENST00000588435.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATGAATGTGAAAAAGT	NA	False	NA	53	True	AGTAAA	-37	NA	14132457	14105993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14106410_14132274
transcript_63483.known	chr18	-	589	2	FSM	ENSG00000175322.12	ENST00000591987.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCACCACGTCTGGCT	0	True	NA	NA	False	NA	NA	NA	14132432	14124045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14124477_14132274
transcript_63485.known	chr18	-	9446	33	FSM	ENSG00000067900.8	ENST00000399799.3	9446	33	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_32	31.0008662933393	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCTGGATAACTGTGAG	-13	True	NA	NA	False	ATTAAA	-18	NA	21111813	20946905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_20951388_20953577_20953786_20954782_20955045_20955166_20955246_20959839_20959929_20960135_20960207_20966916_20967077_20967751_20967941_20968771_20968861_20969114_20969209_20970347_20970514_20979909_20980005_20982762_20982833_20984350_20984536_20986949_20987111_20991175_20991327_20992830_20992938_21006350_21006598_21006698_21006791_21008058_21008195_21015430_21015480_21020150_21020240_21023619_21023681_21028775_21028936_21039471_21039564_21042096_21042236_21042564_21042710_21044101_21044187_21045291_21045468_21049091_21049230_21049779_21049881_21070531_21070614_21110817
transcript_63486.known	chr18	-	480	1	FSM	ENSG00000244527.1	ENST00000473808.1	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGTGTTAAAAAAATAAAT	NA	False	NA	NA	False	AATACA	-9	NA	21119661	21119181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_21119200_21119700
transcript_63488.known	chr18	-	4488	12	FSM	ENSG00000141446.11	ENST00000269214.10	4488	12	0	0	0	0	multi-exon	TRUE	canonical	3	203	junction_6	30.4972563459092	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-26	True	NA	-45	True	AATAAA	-42	NA	21600704	21529283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
transcript_63493.nic	chr18	-	1743	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-138	45022	-138	18718	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTGAAGAGAAAAGTACT	-7	True	NA	NA	False	AATAAA	-13	NA	21601022	21574324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_63495.nic	chr18	-	1527	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-138	45238	-138	18502	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCTCAGAAAAAATTAGT	-7	True	NA	NA	False	AAAAAG	-4	NA	21601022	21574540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_63496.nic	chr18	-	1210	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-138	45555	-138	18185	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTACTCAGGAATGATG	-7	True	NA	NA	False	AAGAAA	-1	NA	21601022	21574857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_63497.nic	chr18	-	883	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	-138	45882	-138	17858	5prime_fragment	FALSE	canonical	3	243	junction_1	24.0739601136904	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAATTAAAAAATTAACAAA	-7	True	NA	NA	False	GATAAA	-39	NA	21601022	21575184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_63501.known	chr18	+	723	3	FSM	ENSG00000167088.11	ENST00000582475.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	2381.5	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAATAGGCTCAGAGGCT	5	True	NA	NA	False	NA	NA	NA	21612330	21629479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_21612444_21623747_21623940_21629061
transcript_63504.known	chr18	+	4858	4	FSM	ENSG00000167088.11	ENST00000300413.10	4858	4	0	0	0	0	multi-exon	FALSE	canonical	3	4976	junction_3	306.235566553303	20212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTTTTTTTTCTTTT	-12	True	NA	4	True	AATAAA	-14	NA	21612313	21633520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_21612444_21622724_21622802_21623747_21623940_21629061
transcript_63505.known	chr18	+	320	4	FSM	ENSG00000167088.11	ENST00000579618.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_2	2303.1648274108	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGAAGAGGGGGTCCT	-12	True	NA	-43	True	NA	NA	NA	21612313	21629109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_21612444_21622724_21622802_21623874_21623940_21629061
transcript_63506.known	chr18	+	745	2	FSM	ENSG00000167088.11	ENST00000577906.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTTTTTTCTTTTCTTT	6286	False	NA	8	True	AATAAA	-18	NA	21630137	21633524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_21630486_21633127
transcript_63508.known	chr18	-	2029	9	FSM	ENSG00000158201.10	ENST00000289119.7	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	9.50575483588757	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCTTTGTGAGTTTTT	16	True	NA	-6	True	AATAAA	-16	NA	21704774	21650900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21664117_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
transcript_6351.known	chr1	-	2843	15	FSM	ENSG00000066557.6	ENST00000370952.4	2843	15	0	0	0	0	multi-exon	TRUE	canonical	3	285	junction_7	24.4320173008238	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTTTATGTTTTCA	-14	True	NA	NA	False	AATAAA	-23	NA	70205579	70144804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
transcript_63510.known	chr18	-	1836	7	FSM	ENSG00000158201.10	ENST00000580981.5	1836	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	25.475478405714	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAAATAAATTCTACCA	23	True	NA	-33	True	TTTAAA	-31	NA	21704767	21650927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21702315_21702499_21703583_21703748_21704503
transcript_63513.nic	chr18	-	1319	5	NIC	ENSG00000266010.3	novel	980	4	NA	NA	-232	-2	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	9.08295106229247	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	2957	False	NA	-28	True	AATAAA	-14	NA	22169200	22166915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_22167309_22167603_22167804_22168043_22168163_22168310_22168384_22168666
transcript_63517.known	chr18	-	839	4	FSM	ENSG00000266010.3	ENST00000579431.3	980	4	116	25	-6	-2	multi-exon	FALSE	canonical	3	25	junction_2	8.60232526704263	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	3720	False	NA	-28	True	AATAAA	-14	NA	22168437	22166915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_22167309_22167603_22167804_22168043_22168163_22168310
transcript_63518.known	chr18	-	432	4	FSM	ENSG00000266010.3	ENST00000649729.2	835	4	21	382	-14	123	multi-exon	FALSE	canonical	0	0	junction_2	19.4821855949366	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCCTGGACACTCGATAC	5	True	NA	NA	False	NA	NA	NA	22168445	22167288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_22167309_22167603_22167804_22168085_22168163_22168310
transcript_63520.nic	chr18	-	1448	4	NIC	ENSG00000266010.3	novel	835	4	NA	NA	-121	-2	intron_retention	FALSE	canonical	3	23	junction_3	9.39266853573691	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	3068	False	NA	-28	True	AATAAA	-14	NA	22169089	22166915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_22167309_22167603_22168163_22168310_22168384_22168666
transcript_63527.nic	chr18	-	1725	3	NIC	ENSG00000266010.3	novel	872	2	NA	NA	-101	0	intron_retention	FALSE	canonical	3	23	junction_2	5.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTGATTCAGACAGAAAA	3088	False	NA	-26	True	AATAAA	-16	NA	22169069	22166913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_22168163_22168310_22168384_22168666
transcript_63528.nic	chr18	-	808	3	FSM	ENSG00000266010.3	ENST00000584373.2	698	3	-112	2	24	-2	multi-exon	FALSE	canonical	2	3	junction_2	21.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTGATTCAGACAGAA	0	True	NA	-28	True	AATAAA	-14	NA	22168525	22166915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_22167309_22167603_22167804_22168310
transcript_63530.nic	chr18	-	1227	3	NIC	ENSG00000266010.3	novel	872	2	NA	NA	-101	0	intron_retention	FALSE	canonical	3	23	junction_2	5.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGTCCAGGCTGTGTA	3088	False	NA	-5	True	AATAAA	-13	NA	22169069	22167411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_22168163_22168310_22168384_22168666
transcript_63532.known	chr18	-	194	2	ISM	ENSG00000266010.3	ENST00000584373.2	698	3	43	756	14	64	5prime_fragment	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGGCGTCCGCCCGGCCG	3787	False	NA	NA	False	TTTAAA	-45	NA	22168370	22167669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_22167804_22168310
transcript_63533.known	chr18	-	1788	2	FSM	ENSG00000266010.3	ENST00000583490.1	1788	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGGCTGCCTGACGT	3189	False	NA	-10	True	AATAAA	-32	NA	22168968	22166897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_22168384_22168666
transcript_63534.nic	chr18	-	1520	2	FSM	ENSG00000266010.3	ENST00000584201.2	872	2	-150	-498	-28	0	multi-exon	FALSE	canonical	3	34	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTTGATTCAGACAGAAAA	3576	False	NA	-26	True	AATAAA	-16	NA	22168581	22166913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_22168163_22168310
transcript_63536.nnic	chr18	-	610	3	NIC	ENSG00000266850.1	novel	413	3	NA	NA	-26107	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGCATTCTGGTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	22933828	22723490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_22723750_22920761_22920872_22933587
transcript_63539.nnic	chr18	-	717	4	NIC	ENSG00000266850.1	novel	381	2	NA	NA	-26107	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.77123616632825	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACTGGCATTCTGGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	22933828	22723492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_22723750_22786749_22786859_22920761_22920872_22933587
transcript_63545.known	chr18	+	3275	19	FSM	ENSG00000101773.19	ENST00000327155.10	3275	19	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	32.7157605391396	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-3	True	NA	15	True	AATACA	-16	NA	22933327	23026486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_63546.known	chr18	+	3293	19	FSM	ENSG00000101773.19	ENST00000399722.6	3293	19	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	56.3875478767747	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	-32	True	NA	17	True	AATACA	-18	NA	22933825	23026488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_22934079_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_63548.nic	chr18	+	3366	19	NIC	ENSG00000101773.19	novel	3293	19	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	57.1646960031784	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-26	True	NA	15	True	AATACA	-16	NA	22933831	23026486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_63556.known	chr18	+	3260	18	FSM	ENSG00000101773.19	ENST00000399725.6	3260	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	83.5251034514438	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	-17	True	NA	15	True	AATACA	-16	NA	22933840	23026486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23022128_23022271_23026142
transcript_63575.known	chr18	+	2229	11	FSM	ENSG00000101773.19	ENST00000399721.6	2229	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	79.4763486831145	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCTTTAAAATTCCTC	18	True	NA	NA	False	AATAAA	-45	NA	22933875	22993569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_22934265_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747
transcript_63582.nic	chr18	+	1441	4	ISM	ENSG00000101773.19	ENST00000327155.10	3275	19	15	75900	15	551	5prime_fragment	FALSE	canonical	3	209	junction_1	32.1489588564786	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAACCCACGATATCCC	12	True	NA	NA	False	NA	NA	NA	22933342	22950586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617
transcript_63584.known	chr18	+	617	3	FSM	ENSG00000101773.19	ENST00000581687.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	22	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	NA	False	NA	17	True	AATACA	-18	NA	23016795	23026488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23016925_23022128_23022271_23026142
transcript_63589.known	chr18	-	2994	15	FSM	ENSG00000134490.14	ENST00000383233.8	2994	15	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_7	21.2219803265292	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCACTTGTTTCTGAACC	-16	True	NA	-24	True	AATAAA	-16	NA	23437961	23296012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_23298068_23309679_23309745_23352195_23352290_23356593_23356664_23365633_23365669_23368714_23368751_23370215_23370262_23371421_23371471_23373711_23373764_23377645_23377672_23384989_23385068_23399565_23399648_23421366_23421445_23430630_23430678_23437780
transcript_636.known	chr1	+	6616	5	FSM	ENSG00000228794.11	ENST00000445118.7	6616	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	22.785686296445	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATGACTATATAACAT	762	False	NA	NA	False	AATAAA	-19	NA	827597	859446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390
transcript_63613.known	chr18	-	578	3	FSM	ENSG00000134490.14	ENST00000577448.5	578	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAGTGCCATCACCCTCA	NA	False	NA	NA	False	NA	NA	NA	23331574	23297874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_23298068_23309679_23309745_23331254
transcript_63616.nnic	chr18	-	1095	3	NNC	ENSG00000266495.1	novel	389	2	NA	NA	-26693	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGCTTCTCTATCCACC	NA	False	NA	-4	True	ATTAAA	-19	NA	23287047	23257163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_23257433_23258656_23258873_23286437
transcript_63620.known	chr18	+	3574	13	FSM	ENSG00000101782.15	ENST00000339486.8	3574	13	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_5	14.1074743782625	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTGTGGTATCTTC	-20	True	NA	19	True	ATTAAA	-21	NA	23453286	23483140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
transcript_63625.nic	chr18	+	1279	6	ISM	ENSG00000101782.15	ENST00000577501.5	1904	13	-30	14794	-9	-871	5prime_fragment	FALSE	canonical	3	82	junction_5	19.9739830779942	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTAAATAAGCCAG	-29	True	NA	NA	False	NA	NA	NA	23453277	23466706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132
transcript_63626.known	chr18	+	1904	13	FSM	ENSG00000101782.15	ENST00000577501.5	1904	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	36.7181456806062	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAACAGCTATAGGTT	1	True	NA	34	True	AATAAA	-39	NA	23453307	23481500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479325_23479425_23481171
transcript_63627.known	chr18	-	4760	25	FSM	ENSG00000141458.13	ENST00000269228.10	4760	25	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_10	16.782100252617	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCTAACCTGTCCTTA	-38	True	NA	41	True	AATACA	-19	NA	23586506	23531441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_23532285_23533354_23533518_23534445_23534560_23535468_23535701_23536672_23536877_23538541_23538672_23539354_23539471_23539810_23540002_23540447_23540538_23541067_23541209_23541305_23541434_23543454_23543570_23544343_23544527_23544959_23545150_23548005_23548109_23551626_23551728_23554757_23554985_23556242_23556614_23557116_23557191_23560230_23560481_23561359_23561528_23568822_23568999_23572073_23572181_23573451_23573575_23586286
transcript_63629.known	chr18	+	2200	20	FSM	ENSG00000141452.10	ENST00000269221.8	2200	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	88	junction_3	11.9833679753749	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTATAGAACTTGTGGG	1	True	NA	NA	False	TATAAA	-42	NA	23503510	23531822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_63638.known	chr18	-	846	2	FSM	ENSG00000154065.17	ENST00000585908.2	846	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGTTTTCCTGAAAACA	-2	True	NA	-35	True	AATAAA	-15	NA	23662772	23648410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_23649194_23662709
transcript_63642.nic	chr18	+	1296	5	ISM	ENSG00000053747.17	ENST00000588770.5	4921	32	51200	0	-432	0	3prime_fragment	FALSE	canonical	3	7	junction_2	5.97390157267426	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAGAATATGAAACTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	23949460	23954989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_23949925_23950028_23950160_23951683_23951778_23952989_23953110_23954502
transcript_63645.nic	chr18	+	966	3	ISM	ENSG00000053747.17	ENST00000588770.5	4921	32	53158	0	1526	0	3prime_fragment	FALSE	canonical	3	14	junction_2	4	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAGAATATGAAACTTT	1565	False	NA	NA	False	ATTAAA	-15	NA	23951418	23954989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_23951778_23952989_23953110_23954502
transcript_63648.nnic	chr18	-	534	2	Antisense	novelGene_ENSG00000053747.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTCCAGCTGTTAATG	NA	False	NA	NA	False	ATTAAA	-33	NA	23949912	23943618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_23943903_23949662
transcript_63650.known	chr18	+	4896	14	FSM	ENSG00000168234.13	ENST00000317571.8	4896	14	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_8	8.44473856714674	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATCTATGTGTGCTTC	-21	True	NA	14	True	AAGAAA	-22	NA	24014753	24135600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24015039_24064139_24064189_24066011_24066141_24069156_24069272_24080584_24080940_24082912_24083082_24114553_24114648_24118124_24118233_24123833_24123944_24125426_24125551_24128885_24128984_24130312_24130418_24131881_24131921_24132484
transcript_63651.known	chr18	+	1048	2	FSM	ENSG00000168234.13	ENST00000584250.1	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGAGATTCCTTTT	-1	True	NA	6	True	ATTAAA	-18	NA	24014419	24020288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24015039_24019859
transcript_63652.nnic	chr18	+	673	2	NNC	ENSG00000168234.13	novel	1048	2	NA	NA	-731	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTGGCTTGAGATTCCT	1128	False	NA	3	True	ATTAAA	-15	NA	24015902	24020285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_24016150_24019859
transcript_63658.known	chr18	-	3317	14	FSM	ENSG00000141447.19	ENST00000399443.7	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_13	49.0989822620754	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTTCTTTTAAAATT	-22	True	NA	-1	True	AATAAA	-23	NA	24272232	24162044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271621
transcript_63678.known	chr18	-	1887	5	FSM	ENSG00000141447.19	ENST00000399441.4	1887	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	102.942945362953	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	32	True	NA	-13	True	AATAAA	-15	NA	24397788	24357124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397572
transcript_63689.known	chr18	-	4152	28	FSM	ENSG00000141447.19	ENST00000319481.8	4152	28	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_17	127.871849429588	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAAGTGTGGTTTCTTT	-4	True	NA	-8	True	AATAAA	-16	NA	24397824	24162051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_63690.known	chr18	-	588	5	FSM	ENSG00000141447.19	ENST00000582350.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	117.178016282919	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATATTGGCCAGACTG	36	True	NA	NA	False	NA	NA	NA	24397784	24347664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24347839_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_63691.known	chr18	-	880	8	FSM	ENSG00000141447.19	ENST00000578013.1	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_7	135.910084321982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTAATCTACAAATAAGT	NA	False	NA	NA	False	ATTAAA	-22	NA	24179835	24163156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24179737
transcript_63694.known	chr18	+	1305	6	FSM	ENSG00000154040.21	ENST00000399496.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	10.0717426496113	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	0	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471_24160070_24161515
transcript_63695.known	chr18	+	824	6	FSM	ENSG00000154040.21	ENST00000415309.6	824	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.0466304267217	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTTGTATTGCTTTTT	6	True	NA	25	True	AATAAA	-15	NA	24139067	24161599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159945_24160070_24161515
transcript_63696.known	chr18	+	2226	6	FSM	ENSG00000154040.21	ENST00000621648.4	2226	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	17.0105849399719	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	33	False	NA	23	True	AATAAA	-13	NA	24139094	24161597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471_24160070_24161515
transcript_63697.known	chr18	+	1792	6	FSM	ENSG00000154040.21	ENST00000463087.5	1792	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	30.0466304267217	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	-4	True	NA	26	True	AATAAA	-16	NA	24139057	24161600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159945_24160070_24161515
transcript_63700.nic	chr18	+	2753	5	ISM	ENSG00000154040.21	ENST00000399496.8	1305	6	-2	0	2	0	intron_retention	FALSE	canonical	3	63	junction_4	7.75806032459145	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	-2	True	NA	26	True	AATAAA	-16	NA	24139059	24161600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471
transcript_63705.known	chr18	+	1109	4	FSM	ENSG00000154040.21	ENST00000327201.10	1109	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	25.6645020732269	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	16	False	NA	23	True	AATAAA	-13	NA	24139031	24161597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24155700_24156043_24159471_24160070_24161515
transcript_63706.nic	chr18	+	2086	4	NIC	ENSG00000154040.21	novel	2252	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	20.6074420214316	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	-1	True	NA	26	True	AATAAA	-16	NA	24139014	24161600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_24139119_24155700_24157000_24159471_24160070_24161515
transcript_63707.known	chr18	-	735	3	FSM	ENSG00000265750.1	ENST00000583267.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGGTGGTTGTCCTCG	1052	False	NA	-6	True	AATAAA	-18	NA	24162211	24159508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24159829_24160777_24160878_24161896
transcript_63708.known	chr18	+	1664	5	FSM	ENSG00000154040.21	ENST00000486759.6	1664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	33.5745439283991	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	0	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24161515
transcript_63712.known	chr18	+	3203	12	FSM	ENSG00000154059.11	ENST00000648078.1	3203	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	88.8536730057434	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTTCTATGGCTTAA	NA	False	NA	10	True	NA	NA	NA	24426633	24453510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778_24450815_24451360
transcript_63718.known	chr18	+	3734	11	FSM	ENSG00000154059.11	ENST00000284202.9	3734	11	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	24.0590939147758	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	3	True	NA	31	True	AATAAA	-20	NA	24426669	24453531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
transcript_63730.nnic	chr18	+	676	3	NNC	ENSG00000266573.6	novel	1952	4	NA	NA	-9368	-978	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTACATGGTAAGACGGCA	NA	False	NA	NA	False	AATAAA	-16	NA	24716393	24910165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_24716563_24716731_24716861_24909787
transcript_63735.nic	chr18	-	688	2	ISM	ENSG00000198795.11	ENST00000579111.5	594	5	-60	122899	-60	-28369	5prime_fragment	FALSE	canonical	3	36	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTTCTTTTTTCCTT	-1	True	NA	-1	True	AATAAA	-14	NA	25352250	25350505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_25350948_25352004
transcript_63736.nic	chr18	-	495	2	ISM	ENSG00000198795.11	ENST00000579111.5	594	5	0	123032	0	-28502	5prime_fragment	FALSE	canonical	3	36	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGAGAGAGAGAAAGAAA	59	False	25352212	NA	False	NA	NA	NA	25352190	25350638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_25350948_25352004
transcript_63738.known	chr18	-	2321	11	FSM	ENSG00000141380.14	ENST00000542420.6	2321	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	287.451995992374	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTTTACAAACCTTTG	-17	True	NA	-13	True	ATTAAA	-13	NA	26091217	26017342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_63744.nic	chr18	-	3320	10	NIC	ENSG00000141380.14	novel	3402	11	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_9	214.935132333249	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-19	True	NA	-22	True	AATAAA	-17	NA	26091219	26016252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_63746.known	chr18	-	3402	11	FSM	ENSG00000141380.14	ENST00000415083.7	3402	11	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_3	240.498669434989	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-2	True	NA	-22	True	AATAAA	-17	NA	26090613	26016252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_63749.known	chr18	-	814	5	FSM	ENSG00000134504.14	ENST00000580191.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.0208152801713	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCTCTGGACTAAATG	-13	True	NA	NA	False	GATAAA	-3	NA	26657401	26455759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26657359
transcript_63750.known	chr18	-	2103	5	FSM	ENSG00000134504.14	ENST00000408011.7	2103	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_4	9.52299847737046	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTGTGAAACACACAT	4	True	NA	-61	True	AATAAA	-18	NA	26549435	26454973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26548890
transcript_63758.known	chr18	-	2598	2	FSM	ENSG00000265369.3	ENST00000579458.1	2598	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATATAATTTGAAATTCC	-4	True	NA	NA	False	AATAAA	-20	NA	26703638	26687620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26689972_26703391
transcript_63759.known	chr18	-	913	1	FSM	ENSG00000266184.1	ENST00000583051.1	913	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGAGGACTGTTGGCTG	24	False	NA	NA	False	AGTAAA	-16	NA	26832432	26831519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26831500_26832400
transcript_63762.known	chr18	-	5200	5	FSM	ENSG00000171885.18	ENST00000672188.1	5200	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.04285397107271	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTATGTTTGATGAAG	-5	True	NA	-14	True	AATAAA	-22	NA	26865752	26852045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26856490_26860771_26860853_26861130_26861296_26862181_26862597_26865657
transcript_63771.known	chr18	-	11379	6	FSM	ENSG00000154080.14	ENST00000618847.5	11379	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	73.053405122554	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCCTGTGCATATTTC	-9	True	NA	-5	True	AATAAA	-23	NA	27185308	26906480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_63783.nnic	chr18	-	742	6	NNC	ENSG00000154080.14	novel	11379	6	NA	NA	-38	-19906	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	137.163260387029	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGTATATGCCTTGCT	-4	True	NA	NA	False	AATAAA	-21	NA	27185346	26935684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_26935880_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_63784.known	chr18	-	2033	5	FSM	ENSG00000154080.14	ENST00000580774.2	2033	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	121.520317231317	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTGGACTTAGGCA	1	True	NA	-5	True	GATAAA	-13	NA	27185298	26915778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26917351_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_63787.known	chr18	-	2043	5	FSM	ENSG00000154080.14	ENST00000581714.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	80.9826370279457	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGGACTTAGGCATT	10	True	NA	-3	True	GATAAA	-15	NA	27143038	26915776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688
transcript_63807.known	chr18	-	4016	16	FSM	ENSG00000170558.10	ENST00000269141.8	4016	16	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_11	59.2315981737976	578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	-10	True	NA	-11	True	AATAAA	-20	NA	28177130	27950965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
transcript_63813.known	chr18	+	953	3	FSM	ENSG00000265888.3	ENST00000654403.2	998	3	43	2	-5	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGGTTTTCCTGTTAAT	-5	True	NA	NA	False	AATAAA	-11	NA	31101582	31131301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_31101724_31103122_31103195_31130561
transcript_63815.nnic	chr18	-	445	3	NNC	ENSG00000134755.18	novel	12331	16	NA	NA	622	-26132	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	121	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTGGAGCAT	632	False	NA	NA	False	AAGAAA	-10	NA	31101799	31092129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_31092301_31093558_31093644_31101610
transcript_63816.nic	chr18	-	382	3	ISM	ENSG00000134755.18	ENST00000251081.8	12377	17	393	33290	393	-26132	5prime_fragment	FALSE	canonical	3	250	junction_1	8	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTGGAGCAT	403	False	NA	NA	False	AAGAAA	-10	NA	31102028	31092129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_31092301_31093558_31093644_31101902
transcript_63819.known	chr18	+	5697	15	FSM	ENSG00000046604.14	ENST00000261590.13	5697	15	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_11	68.8616255209515	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGGGGTACTTGGCAT	-35	True	NA	26	True	AATAAA	-29	NA	31498176	31549008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31524447_31524586_31524702_31524889_31530986_31531253_31535269_31535413_31536201_31536430_31538750_31538979_31541192_31541315_31542519_31542853_31545720
transcript_63822.nic	chr18	+	955	7	NIC	ENSG00000046604.14	novel	948	7	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	277.821685418703	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCATGTGTTTCTTT	-3	True	NA	7	True	AATAAA	-17	NA	31498208	31522608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31522386
transcript_63824.known	chr18	+	616	4	FSM	ENSG00000118271.12	ENST00000237014.8	616	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTCCACTTTAACT	0	True	NA	NA	False	AATAAA	-19	NA	31591876	31598821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_31591972_31592895_31593027_31595119_31595256_31598567
transcript_63827.known	chr18	-	4672	9	FSM	ENSG00000118276.12	ENST00000306851.10	4672	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	17.5957203603604	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTGAAGATGTAATT	-13	True	NA	-9	True	AATATA	-13	NA	31684581	31622245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_31625762_31626282_31626385_31626998_31627122_31630958_31631147_31638643_31638761_31645354_31645480_31657975_31658090_31666255_31666373_31684311
transcript_63831.nnic	chr18	+	838	2	Antisense	novelGene_ENSG00000153339.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTCTAATCAACAGATA	NA	False	NA	14	True	AATAAA	-18	NA	31819146	31829908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_+_31819445_31829368
transcript_63833.known	chr18	-	666	1	FSM	ENSG00000276282.1	ENST00000616300.1	666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGAATGTGTTGCCGTG	NA	False	NA	NA	False	AATAAA	-14	NA	31896410	31895744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_31895700_31896400
transcript_63836.known	chr18	+	3551	8	FSM	ENSG00000134758.14	ENST00000261593.8	3551	8	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	76.3653944492383	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	-16	True	NA	10	True	ATTAAA	-16	NA	32091873	32131561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_63846.nic	chr18	+	2428	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	741	846	5	0	3prime_fragment	FALSE	canonical	3	484	junction_2	42.3110177403265	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	605	False	NA	13	True	AATAAA	-15	NA	32092614	32130715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_63849.known	chr18	+	5573	6	FSM	ENSG00000101695.9	ENST00000217740.4	5573	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	14.0370937162933	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTACTATTTTACTC	-5	True	NA	45	True	ATTAAA	-31	NA	32018824	32073219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32065901_32066010_32068297
transcript_63858.nnic	chr18	+	1125	5	NNC	ENSG00000263917.1	novel	565	5	NA	NA	-339	-23635	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	23.6959912221456	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTGGCACTGGTCATT	30	False	NA	17	True	AATAAA	-19	NA	32018489	32088144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32087897
transcript_63859.known	chr18	+	2071	5	FSM	ENSG00000134758.14	ENST00000257190.9	2071	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	223.449518907515	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	9	True	NA	13	True	AATAAA	-15	NA	32092689	32130715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_32092887_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_63866.known	chr18	-	473	2	FSM	ENSG00000265008.1	ENST00000582233.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	32092119	32091294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_32091503_32091854
transcript_63867.nnic	chr18	-	273	2	Antisense	novelGene_ENSG00000263765.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGGGAAGTTTTTTCT	NA	False	NA	NA	False	AATAAA	-15	NA	32862692	32855272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_32855440_32862586
transcript_63870.known	chr18	-	1930	10	FSM	ENSG00000101746.16	ENST00000590712.5	1930	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.23560439523579	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGCATAAAAGGCTATCTA	1713	False	NA	NA	False	CATAAA	-6	NA	34223205	33852588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_33853036_33883243_33883425_33943064_33943179_33958238_33958419_34019317_34019602_34093464_34093598_34104046_34104160_34105048_34105161_34129870_34130021_34222989
transcript_63872.known	chr18	+	3353	22	FSM	ENSG00000134769.23	ENST00000684359.1	3353	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.994476868821	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTTGGAACCTC	28	True	NA	-59	True	NA	NA	NA	34493360	34891280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34875238_34875399_34877718_34877809_34879550_34879720_34882068_34882202_34884727_34884777_34890299
transcript_63875.known	chr18	+	2671	17	FSM	ENSG00000134769.23	ENST00000598774.6	2671	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.0699424515677	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAATTAAA	-2	True	NA	NA	False	NA	NA	NA	34493330	34866980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
transcript_63881.known	chr18	+	1706	13	FSM	ENSG00000134769.23	ENST00000315456.10	1706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	36.8567045009001	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTGAGTGGGCCT	-16	True	NA	13	True	AATAAA	-20	NA	34493316	34829328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34829040
transcript_63890.nnic	chr18	+	801	5	NNC	ENSG00000134769.23	novel	1508	11	NA	NA	-52	6195	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	40.6901400833175	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGAAAAGGTCTATAAT	NA	False	NA	NA	False	ATTAAA	-20	NA	34493238	34772222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34771971
transcript_63892.nic	chr18	+	1389	4	ISM	ENSG00000134769.23	ENST00000315456.10	1706	13	-78	62448	-52	853	5prime_fragment	FALSE	canonical	3	81	junction_1	8.73053390247253	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGACAATACTTAAAGAAAC	NA	False	NA	NA	False	AAGAAA	-2	NA	34493238	34766880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960
transcript_63895.known	chr18	+	528	2	FSM	ENSG00000134769.23	ENST00000588506.1	528	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTTCTTTGCCTATGCA	9	True	NA	NA	False	AATAGA	-43	NA	34493409	34513937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_34493515_34513514
transcript_63897.known	chr18	+	4212	7	FSM	ENSG00000166974.13	ENST00000300249.10	4212	7	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_4	19.6638416050035	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGGAGTTACAGATT	-10	True	NA	18	True	AATAAA	-21	NA	35041412	35143470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35041662_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
transcript_63900.known	chr18	+	622	2	FSM	ENSG00000166974.13	ENST00000585592.1	622	2	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTACAACACTCCTCCT	67	False	NA	NA	False	AAAACA	-8	NA	35041489	35070644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35041662_35070194
transcript_63901.known	chr18	+	1419	6	FSM	ENSG00000186812.13	ENST00000261333.10	1419	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	9.70360757656656	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTTGGAGGGTGAAT	8	True	NA	9	True	AATAAA	-20	NA	35241054	35258394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261_35245352_35254231_35254403_35257927
transcript_63909.known	chr18	+	2162	5	FSM	ENSG00000186812.13	ENST00000355632.8	2162	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	12.9711217710728	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCCAGGCTGGAGTGCA	8	True	NA	NA	False	NA	NA	NA	35241054	35259227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35254231_35254403_35257927
transcript_63917.known	chr18	+	5259	4	FSM	ENSG00000186812.13	ENST00000330501.12	5259	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	9.93310961716756	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATACTGGTTATGTGT	-13	True	NA	14	True	ATTAAA	-18	NA	35241033	35249808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261
transcript_63928.nic	chr18	+	2755	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	10.3708994574027	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	-13	True	NA	NA	False	ACTAAA	-14	NA	35241033	35246723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_35241691_35242390_35242885_35243151_35243294_35245261
transcript_63935.known	chr18	-	3368	4	FSM	ENSG00000186814.14	ENST00000589178.5	3368	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8.73053390247253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATATATAAAAAATAG	24	True	NA	NA	False	NA	NA	NA	35290197	35260642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35263241_35263512_35263658_35263944_35264456_35290083
transcript_63936.known	chr18	-	4122	4	FSM	ENSG00000186814.14	ENST00000333206.10	4122	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	6.37704215656966	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTTGAAATTATTCA	-8	True	NA	-5	True	AATAAA	-16	NA	35290229	35251061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35254382_35263512_35263658_35263944_35264456_35290083
transcript_63943.known	chr18	+	1516	3	FSM	ENSG00000186812.13	ENST00000591206.5	1516	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	10	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCACAGTGTATTCAAT	-10	True	NA	5	True	ATTAAA	-17	NA	35241036	35244100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390_35242885_35243151
transcript_63947.known	chr18	+	2046	3	FSM	ENSG00000186812.13	ENST00000585800.1	2046	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	11	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCCTATTAAAGACTG	10	True	NA	-26	True	NA	NA	NA	35241056	35244069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241691_35242390_35242885_35243151
transcript_63953.known	chr18	+	690	2	FSM	ENSG00000186812.13	ENST00000589630.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGCCATACTTGTCT	-17	True	NA	NA	False	GATAAA	-39	NA	35241029	35243000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390
transcript_63956.known	chr18	-	4382	2	FSM	ENSG00000268573.1	ENST00000586922.2	4382	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGAAATAAATCAA	20	True	NA	NA	False	TTTAAA	-22	NA	35290201	35280866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35285178_35290130
transcript_63958.known	chr18	+	5124	3	FSM	ENSG00000257267.4	ENST00000399070.3	5124	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	38.5	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTGGTTCCTGTTGAA	NA	False	NA	6	True	AATAAA	-17	NA	35290281	35310766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35290392_35291009_35291233_35305975
transcript_63963.known	chr18	+	2191	2	FSM	ENSG00000257267.4	ENST00000638208.2	2233	2	42	0	12	0	multi-exon	FALSE	canonical	3	121	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCACC	23	False	NA	NA	False	NA	NA	NA	35290335	35308110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35290392_35305975
transcript_63970.nnic	chr18	-	1478	4	NNC	ENSG00000172466.16	novel	6256	4	NA	NA	-16022	3022	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	113.862490165404	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGCACTCAGGTCTTT	NA	False	NA	NA	False	AAGAAA	-16	NA	35361504	35337212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_35337771_35339828_35339977_35340230_35340734_35361235
transcript_63973.known	chr18	-	6282	4	FSM	ENSG00000172466.16	ENST00000399061.3	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	8.04155872120988	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGTCAACTTTT	15	False	35344471	-20	True	AATAAA	-21	NA	35344456	35332226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344369
transcript_63974.known	chr18	-	3661	4	FSM	ENSG00000186496.12	ENST00000589332.7	3661	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.62466929133727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATTGTTTTCTGGCTT	-17	True	NA	NA	False	AGTAAA	-16	NA	35377337	35366693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35369661_35373455_35373601_35373875_35374365_35377277
transcript_63975.known	chr18	-	1320	3	FSM	ENSG00000186496.12	ENST00000586687.5	1320	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTAGAGGCCTTGTAG	-17	True	NA	NA	False	AAAACA	-42	NA	35377337	35372829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35373601_35373875_35374365_35377277
transcript_6398.known	chr1	+	2385	13	FSM	ENSG00000116754.14	ENST00000370951.5	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	293.336872611224	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACCTTATCTCTTG	-31	True	NA	NA	False	NA	NA	NA	70205681	70251617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_63980.known	chr18	-	904	7	FSM	ENSG00000153391.16	ENST00000441607.6	904	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	121.652510591986	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTAGTGTG	1	True	NA	-8	True	NA	NA	NA	35497943	35468462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385_35487440_35489331_35489386_35497718
transcript_63986.known	chr18	-	408	5	FSM	ENSG00000153391.16	ENST00000591139.1	408	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	105.47126385893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCACCATTGAAGAGT	NA	False	NA	NA	False	NA	NA	NA	35487470	35468710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385
transcript_6399.known	chr1	+	3784	13	FSM	ENSG00000116754.14	ENST00000370950.7	3784	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	311.187867515571	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	11	True	NA	20	True	AATAAA	-21	NA	70205723	70253052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_63997.known	chr18	-	455	3	FSM	ENSG00000267140.1	ENST00000589258.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	4	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTATGGTATTTT	4	True	NA	-2	True	AATAAA	-17	NA	35497940	35443870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35444023_35446874_35446956_35497718
transcript_63999.known	chr18	-	382	3	FSM	ENSG00000153391.16	ENST00000587450.1	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	111	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGACGTCGTCACCGG	-16	True	NA	NA	False	NA	NA	NA	35497960	35468670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35478281_35478350_35497718
transcript_64.known	ERCC-00150	+	727	1	FSM	ERCC-00150A	DQ883659	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00150_+_0_700
transcript_6400.known	chr1	+	1408	11	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	0	413	0	-333	5prime_fragment	FALSE	canonical	3	44	junction_9	345.196306469232	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	27	False	NA	-6	True	CATAAA	-22	NA	70221395	70250392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364
transcript_64000.known	chr18	-	595	2	FSM	ENSG00000153391.16	ENST00000590757.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAAGTCCCTGAATTTT	115	False	NA	-5	True	AATAAA	-17	NA	35497904	35468333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35497718
transcript_64001.known	chr18	-	3245	5	FSM	ENSG00000153391.16	ENST00000592173.5	3245	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	109.245995349944	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTCACTTGGTCATG	11	True	NA	-9	True	AATAAA	-20	NA	35497933	35452229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35454969_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_64002.known	chr18	-	943	5	FSM	ENSG00000153391.16	ENST00000334598.12	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	18.7533330370897	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCCCTGAATTTTT	-16	True	NA	-4	True	AATAAA	-18	NA	35497960	35468332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_64008.known	chr18	+	985	5	FSM	ENSG00000141428.17	ENST00000592875.6	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	27.5590275590413	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	1	True	NA	14	True	TATAAA	-19	NA	35972678	35979278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35972806_35972884_35972908_35974895_35975096_35977409_35977601_35978834
transcript_6401.known	chr1	+	668	3	FSM	ENSG00000116754.14	ENST00000469170.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	546.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATTGTATTA	-6	True	NA	NA	False	NA	NA	NA	70221479	70231268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70221840_70228421_70228556_70231094
transcript_64014.known	chr18	+	703	4	FSM	ENSG00000141428.17	ENST00000269194.10	703	4	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	124.408824267234	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGATTCCAAAGGTGG	NA	False	NA	NA	False	ACTAAA	-25	NA	35972633	35978939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35972841_35974895_35975096_35977409_35977601_35978834
transcript_6402.known	chr1	-	5658	13	FSM	ENSG00000118454.13	ENST00000370944.9	5658	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	22.3619220004801	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGGTTCAGCATATTA	-9	True	NA	-16	True	AATAAA	-20	NA	70354722	70258998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_64020.known	chr18	+	958	4	FSM	ENSG00000141428.17	ENST00000333234.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	15.121728296285	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	72	False	NA	14	True	TATAAA	-19	NA	35972784	35979278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35972908_35974895_35975096_35977409_35977601_35978834
transcript_64023.known	chr18	-	1945	9	FSM	ENSG00000141425.18	ENST00000590898.5	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	305.076937017533	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	24	True	NA	-2	True	AATAAA	-25	NA	36067530	35989823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_64024.known	chr18	-	1850	8	FSM	ENSG00000141425.18	ENST00000357384.8	1850	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	220.065852852815	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCTGATGACAGTA	-2	True	NA	-64	True	NA	NA	NA	36067556	35989885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_64025.known	chr18	-	1264	8	FSM	ENSG00000141425.18	ENST00000588737.5	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	291.551934674159	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAACGAGTAATTTATA	-5	True	NA	NA	False	AAGAAA	-12	NA	36067559	35993039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_6403.known	chr1	-	3327	12	FSM	ENSG00000118454.13	ENST00000262346.6	3327	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	60.9668654080719	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTCCATACTGATACAT	-21	True	NA	-15	True	AATAAA	-15	NA	70354734	70261236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70336057_70336100_70353978
transcript_64030.known	chr18	-	4421	7	FSM	ENSG00000141425.18	ENST00000399022.9	4421	7	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	88.6655701686587	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	-5	True	NA	-2	True	AATAAA	-25	NA	36067559	35989823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_64033.known	chr18	-	1022	7	FSM	ENSG00000141425.18	ENST00000589050.1	1022	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	255.899340019122	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-3	True	NA	-32	True	AATAAA	-13	NA	36067557	36025598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36025679_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_64035.nic	chr18	-	2337	7	ISM	ENSG00000141425.18	ENST00000588737.5	1264	8	-33	32559	-16	0	5prime_fragment	FALSE	canonical	3	44	junction_5	314.846523457594	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	NA	False	NA	-32	True	AATAAA	-13	NA	36067592	36025598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_64039.nic	chr18	-	2280	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	-38	35713	-18	0	5prime_fragment	FALSE	canonical	3	626	junction_5	60.2547923405267	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	NA	False	NA	-32	True	AATAAA	-13	NA	36067594	36025598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_6404.known	chr1	+	689	5	FSM	ENSG00000197568.15	ENST00000525653.1	689	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.4236596587959	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAAAGGGCCGGTTCCT	33	True	NA	NA	False	NA	NA	NA	70354854	70367723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355108_70366145_70366329_70366443_70366538_70366932_70366985_70367616
transcript_64044.known	chr18	-	3003	10	FSM	ENSG00000141424.13	ENST00000590986.5	3003	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	67.0910566062513	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAATTGGGGAGGCAT	-20	True	NA	NA	False	AATAAA	-17	NA	36129381	36109147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129100
transcript_64045.nic	chr18	-	2789	9	NIC	ENSG00000141424.13	novel	3566	10	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	3	3	junction_8	77.5914782692017	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	0	True	NA	-6	True	AATAAA	-19	NA	36129361	36108530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36129113
transcript_64047.nnic	chr18	-	1237	2	FSM	ENSG00000288917.1	ENST00000690777.1	909	2	-63	-265	-63	265	multi-exon	FALSE	canonical	3	11	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACTTTAAAAAAAAAATTAA	-42	True	NA	NA	False	NA	NA	NA	36129403	36127780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36128728_36129113
transcript_64049.known	chr18	+	2722	23	FSM	ENSG00000134759.14	ENST00000442325.6	2722	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	167.168865977089	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	-12	True	NA	27	True	AATAAA	-23	NA	36129897	36174651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36139418_36139614_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_64056.known	chr18	+	8432	22	FSM	ENSG00000134759.14	ENST00000358232.11	8432	22	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_5	50.1900243948221	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTTTGGTAAACCCC	-11	True	NA	10	True	AATAAA	-22	NA	36129898	36180557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_64058.known	chr18	+	2542	22	FSM	ENSG00000134759.14	ENST00000539560.5	2542	22	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_18	125.927272679651	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	-9	True	NA	27	True	NA	NA	NA	36129900	36174721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167152_36167223_36170062_36170197_36171046_36171161_36174484
transcript_64074.known	chr18	+	2453	21	FSM	ENSG00000134759.14	ENST00000351393.10	2453	21	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	132.342699080833	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTACATGCTTGCAGT	-19	True	NA	24	True	AATAAA	-20	NA	36129890	36174648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_6408.known	chr1	+	832	4	FSM	ENSG00000197568.15	ENST00000463058.6	863	4	31	0	-15	0	multi-exon	FALSE	canonical	3	19	junction_2	7.1336448530109	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	7	True	NA	14	True	ATTAAA	-22	NA	70354828	70368023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355108_70366443_70366538_70366932_70366985_70367616
transcript_64085.known	chr18	+	2385	19	FSM	ENSG00000134759.14	ENST00000423854.6	2385	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	143.287288039031	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTGAGTTTCTGGGTT	-11	True	NA	26	True	NA	NA	NA	36129898	36174720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_6409.nic	chr1	+	872	4	FSM	ENSG00000197568.15	ENST00000689607.1	868	4	0	-4	0	0	multi-exon	FALSE	canonical	3	19	junction_2	8.9938250421547	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-29	True	NA	14	True	ATTAAA	-22	NA	70354792	70368023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355112_70366443_70366538_70366932_70366985_70367616
transcript_6410.nnic	chr1	+	1003	4	NIC	ENSG00000197568.15	novel	1095	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	31.6789449880446	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-29	True	NA	14	True	ATTAAA	-22	NA	70354792	70368023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_70355112_70366145_70366329_70366443_70366538_70367616
transcript_64103.known	chr18	+	583	3	FSM	ENSG00000134759.14	ENST00000541190.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	7	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTAAGTTTTTTTCT	-16	True	NA	NA	False	NA	NA	NA	36129893	36136632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306
transcript_64105.known	chr18	-	609	2	FSM	ENSG00000260552.2	ENST00000568654.2	620	2	11	0	2	0	multi-exon	FALSE	canonical	3	10	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAATTTTTTTTCACA	-17	True	NA	NA	False	AATAAA	-30	NA	36187448	36179995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36180391_36187234
transcript_64106.known	chr18	+	674	4	FSM	ENSG00000134759.14	ENST00000541748.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_1	60.7014552269274	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACATGCTTGCAGTCACTG	NA	False	NA	29	True	AATAAA	-25	NA	36166965	36174653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36167223_36170062_36170197_36171046_36171161_36174484
transcript_64107.nnic	chr18	+	965	2	NNC	ENSG00000075643.6	novel	6182	15	NA	NA	61	-72507	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCATTCTACACAAAACAAA	35	False	NA	NA	False	AATAAA	-16	NA	36187557	36194307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_36187682_36193466
transcript_6411.nic	chr1	+	1095	4	FSM	ENSG00000197568.15	ENST00000486110.2	1095	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.4995726467629	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-24	True	NA	14	True	ATTAAA	-22	NA	70354797	70368023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355209_70366145_70366329_70366443_70366538_70367616
transcript_64114.known	chr18	+	4853	10	FSM	ENSG00000150477.15	ENST00000280020.10	4853	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	13.1824799555235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTTTGATATTGAATT	2	True	NA	12	True	AATAAA	-25	NA	36829126	37225334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_37066889_37067546_37160199_37160382_37172972_37173082_37222016
transcript_64115.nnic	chr18	+	1039	7	NNC	ENSG00000150477.15	novel	4853	10	NA	NA	-10	17648	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	15.4668103441602	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATGGCCATTTATTT	-8	True	NA	NA	False	AATAAA	-16	NA	36829116	36973500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_36973059
transcript_64121.nnic	chr18	+	711	6	NNC	ENSG00000150477.15	novel	4853	10	NA	NA	-49	10981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	13.3356664625357	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTTATAATGTGTGTG	81	False	NA	5	True	ATTAAA	-18	NA	36829056	36897385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36897204
transcript_64123.known	chr18	+	1190	5	FSM	ENSG00000150477.15	ENST00000592521.5	1190	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	4.18330013267038	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATGTTGTAATTGGTA	4	True	NA	NA	False	ATTAAA	-19	NA	36829128	36886404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556
transcript_64129.known	chr18	+	507	2	FSM	ENSG00000150477.15	ENST00000599493.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGAGAATCTTTTGAG	332	False	NA	NA	False	AATAAA	-21	NA	37067339	37084425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_37067546_37084124
transcript_64137.known	chr18	-	1239	7	FSM	ENSG00000134779.15	ENST00000590842.5	1239	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	396.556322187236	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-1	True	NA	-8	True	AATAAA	-16	NA	36828842	36786572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36787080_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_64138.known	chr18	-	3835	7	FSM	ENSG00000134779.15	ENST00000334295.9	3835	7	0	0	0	0	multi-exon	FALSE	canonical	3	998	junction_1	99.5020937803153	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGCATTTTACTATTC	-3	True	NA	-8	True	ACTAAA	-20	NA	36829002	36794107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_64139.known	chr18	-	1726	6	FSM	ENSG00000134779.15	ENST00000383056.7	1726	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	476.304356478082	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	13	True	NA	-26	True	TATAAA	-17	NA	36828986	36796071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36807846_36807935_36818893_36818974_36828682
transcript_6414.known	chr1	+	898	3	FSM	ENSG00000197568.15	ENST00000359875.9	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	33	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-10	True	NA	14	True	ATTAAA	-22	NA	70354811	70368023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355209_70366443_70366538_70367616
transcript_64140.known	chr18	-	1102	6	FSM	ENSG00000134779.15	ENST00000589049.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_2	42.3650799597971	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTCCTTTTTTC	13	True	NA	-19	True	CATAAA	-14	NA	36828781	36798017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_64145.known	chr18	-	579	2	FSM	ENSG00000101489.20	ENST00000590011.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGGCTGGGGCAAGTGG	-11	True	NA	NA	False	GGGGCT	-22	NA	37253981	37244833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_37245198_37253766
transcript_6415.known	chr1	+	692	3	FSM	ENSG00000197568.15	ENST00000361764.9	823	3	19	112	7	-108	multi-exon	FALSE	canonical	3	36	junction_1	19	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTACCCAAATCCTATAAA	-17	True	NA	-98	True	NA	NA	NA	70354804	70367911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355108_70366443_70366538_70367616
transcript_64151.nnic	chr18	-	832	3	NNC	ENSG00000267374.3	novel	457	2	NA	NA	0	-7702	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTATTGGCCCTTGTTGT	-24	True	NA	NA	False	AATAAA	-14	NA	39800316	39740829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_39741382_39751328_39751361_39800068
transcript_64152.known	chr18	-	590	4	FSM	ENSG00000267374.3	ENST00000652839.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.8662192343351	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGGTGGTTATTATT	-13	True	NA	NA	False	AATAAA	-21	NA	39800305	39275635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_39275799_39535457_39535616_39751328_39751361_39800068
transcript_64153.known	chr18	-	1442	4	FSM	ENSG00000267374.3	ENST00000670383.1	1442	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.7417989148054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGACCTTTTATTGTTTT	NA	False	NA	NA	False	AATAAA	-28	NA	39751999	39297572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_39298730_39535457_39535616_39751328_39751361_39751904
transcript_64154.nic	chr18	-	457	2	FSM	ENSG00000267374.3	ENST00000689119.1	457	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGAAGAGAAAAAATAGTA	-24	True	NA	NA	False	ATTAAA	-7	NA	39800316	39751151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_39751361_39800068
transcript_64155.known	chr18	-	801	1	FSM	ENSG00000175886.10	ENST00000588490.1	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	22	False	NA	NA	False	ACTAAA	-10	NA	39335672	39334871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_39334900_39335700
transcript_6416.known	chr1	+	802	3	FSM	ENSG00000197568.15	ENST00000370940.7	815	3	13	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	16.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-11	True	NA	14	True	ATTAAA	-22	NA	70354810	70368023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355112_70366443_70366538_70367616
transcript_6418.known	chr1	-	575	2	FSM	ENSG00000226088.1	ENST00000413943.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCATACCTATTAAGATA	0	True	NA	NA	False	ATTAAA	-17	NA	70360437	70359561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_70359996_70360296
transcript_64183.nnic	chr18	-	885	4	NIC	ENSG00000267313.7	novel	549	5	NA	NA	-56	-1648	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	5.24933858267454	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGCCATGCTCTGGG	NA	False	NA	4	True	AATAAA	-16	NA	41632241	41467430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_41467781_41501119_41501277_41516419_41516556_41631999
transcript_64200.known	chr18	+	9415	25	FSM	ENSG00000078142.14	ENST00000262039.9	9415	25	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_15	19.4415077147381	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	6	True	NA	NA	False	AATAAA	-20	NA	41955233	42087830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_64206.known	chr18	+	9206	24	FSM	ENSG00000078142.14	ENST00000398870.7	9206	24	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31.2694854184792	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	26	True	NA	NA	False	AATAAA	-20	NA	41955253	42087830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_41955360_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_64208.known	chr18	+	733	4	FSM	ENSG00000078142.14	ENST00000588156.5	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	29.7097066068763	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGTTCTGGAGGAAGT	NA	False	NA	36	True	AATAAA	-38	NA	42057834	42081421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_42058052_42064739_42064831_42067387_42067514_42081122
transcript_6423.known	chr1	+	2090	12	FSM	ENSG00000116761.12	ENST00000370938.8	2090	12	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	27.6877512674456	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAATGGCGTGAAACC	6	True	NA	NA	False	NA	NA	NA	70411267	70439851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_64234.known	chr18	-	3936	4	FSM	ENSG00000132872.12	ENST00000255224.8	3936	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	7.87400787401181	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTTCAATGCAGACTTT	-1	True	NA	-13	True	AATAAA	-18	NA	43277490	43267891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_43270649_43271711_43271833_43273579_43274395_43277247
transcript_64237.known	chr18	+	6280	6	FSM	ENSG00000152217.20	ENST00000677068.1	6280	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.24499443206436	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	58	False	NA	NA	False	NA	NA	NA	44680188	45064808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_44680396_44701174_44701833_44869229_44869284_44949880_44953341_45038484_45038656_45063078
transcript_64239.nic	chr18	+	1185	2	ISM	ENSG00000152217.20	ENST00000649279.2	9909	6	-75	366360	-75	-169996	5prime_fragment	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAATATATTTGCT	534	False	NA	NA	False	AAGAAA	-9	NA	44680812	44702150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_44681022_44701174
transcript_64241.known	chr18	-	3000	15	FSM	ENSG00000152229.18	ENST00000409746.5	3000	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.57644813704038	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTCGTATTTTTGTGT	13	True	NA	-2	True	AATAAA	-20	NA	46072260	45983535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_45985451_45988701_45988760_45990721_45990757_45991901_45991984_45992105_45992203_45993604_45993704_45997748_45997829_45998793_45998840_45999435_45999535_46005468_46005532_46011180_46011288_46015902_46015938_46024608_46024687_46039946_46040048_46072155
transcript_64249.known	chr18	-	2214	12	FSM	ENSG00000152234.16	ENST00000586592.5	2214	12	0	0	0	0	multi-exon	FALSE	canonical	2	147	junction_11	1812.47732844185	11059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	5962	False	NA	-16	True	AATAAA	-14	NA	46098315	46084149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46097835
transcript_64257.known	chr18	-	5761	12	FSM	ENSG00000152234.16	ENST00000398752.11	5761	12	0	0	0	0	multi-exon	FALSE	canonical	3	5718	junction_8	346.405986435016	13712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGTCTTTTTTGCTCT	-8	True	NA	2	True	TTTAAA	-20	NA	46098296	46080247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171
transcript_64258.known	chr18	-	1945	13	FSM	ENSG00000152234.16	ENST00000282050.6	1945	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1795.41843428396	20081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTCATTTGTGTTA	44	False	NA	-10	True	AATAAA	-20	NA	46104233	46084143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171_46098280_46104136
transcript_64259.known	chr18	-	1931	12	FSM	ENSG00000152234.16	ENST00000590156.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	1871.69721009596	10960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-7	True	NA	-16	True	AATAAA	-14	NA	46098295	46084149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46094979_46095132_46098171
transcript_64260.known	chr18	-	1793	12	FSM	ENSG00000152234.16	ENST00000590665.5	1793	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1874.77675585589	9934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-8	True	NA	-16	True	AATAAA	-14	NA	46098296	46084149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089888_46089997_46091681_46091852_46095052_46095132_46098171
transcript_64264.known	chr18	+	1072	9	FSM	ENSG00000152240.13	ENST00000282058.11	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_4	145.328883485011	9481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	9	True	NA	30	True	ATTAAA	-16	NA	46104384	46128333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_64265.known	chr18	+	1098	9	FSM	ENSG00000152240.13	ENST00000591715.5	1098	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	500.269411792286	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGTTTCTGTGTGGT	20	True	NA	27	True	ATTAAA	-13	NA	46104395	46128330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105409_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_64266.known	chr18	+	616	7	FSM	ENSG00000152240.13	ENST00000589554.5	616	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	579.247116714639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTACAGAGTTCTT	30	True	NA	NA	False	AATAAA	-30	NA	46104405	46128169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105369_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_64267.known	chr18	+	506	6	FSM	ENSG00000152240.13	ENST00000585518.5	506	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	614.238520446251	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTCTTTTTCCTCTTG	26	True	NA	NA	False	AATAAA	-40	NA	46104401	46128179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105369_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_6427.known	chr1	+	1196	11	FSM	ENSG00000116761.12	ENST00000346806.2	1196	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	104.561417358412	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGCAAAATTTTCAAGC	121	False	NA	NA	False	ATTAAA	-16	NA	70411382	70439204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70411584_70415955_70416038_70417936_70418033_70421565_70421676_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_64274.known	chr18	+	5264	4	FSM	ENSG00000152242.11	ENST00000619301.4	5264	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	30.8796948747159	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGATATCTTCTGAG	3	True	NA	2	True	AATAAA	-14	NA	46174033	46266983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46174331_46215810_46216596_46253696_46253824_46262928
transcript_64278.nnic	chr18	-	338	2	Antisense	novelGene_ENSG00000141622.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	229	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATCCAAAGAATTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	46433581	46429231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_46429415_46433426
transcript_64280.known	chr18	+	1193	4	FSM	ENSG00000270112.4	ENST00000662459.1	1193	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCACAGTTCTACATGGC	0	True	NA	NA	False	AATAAA	-17	NA	46756938	46784513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46757032_46759810_46760267_46782563_46782676_46783981
transcript_64282.known	chr18	+	633	2	FSM	ENSG00000270112.4	ENST00000602333.1	633	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATAGTTTGTTCAATCT	1385	False	NA	NA	False	NA	NA	NA	46756932	46760344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46757032_46759810
transcript_64286.known	chr18	-	11243	14	FSM	ENSG00000078043.16	ENST00000585916.6	11243	14	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	61.9273290465545	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGCTTTCATTGGTCA	-23	True	NA	NA	False	ATTAAA	-31	NA	46917507	46803217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_6429.known	chr1	+	2044	11	FSM	ENSG00000116761.12	ENST00000411986.6	2044	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	109.100870757295	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGAGAATGGCGTGAAACC	-4	True	NA	NA	False	NA	NA	NA	70411217	70439851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70411584_70415955_70416038_70421565_70421676_70424284_70424417_70429793_70429852_70430316_70430395_70432082_70432236_70433827_70433950_70435124_70435178_70438687_70438827_70439100
transcript_64292.known	chr18	-	4543	13	FSM	ENSG00000078043.16	ENST00000324794.11	4543	13	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	61.5559817474215	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-19	True	NA	2	True	AATAAA	-24	NA	46917503	46815710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_64295.known	chr18	-	1838	11	FSM	ENSG00000078043.16	ENST00000590127.5	1838	11	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_6	24.8427051667084	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGTGTGAGGTATTTA	10	True	NA	NA	False	NA	NA	NA	46917474	46827757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_64301.nnic	chr18	+	1010	3	FSM	ENSG00000289168.1	ENST00000688277.1	1001	3	-11	2	-4	-2	multi-exon	FALSE	canonical	3	9	junction_2	17.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868635	46875565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868693_46868811_46868969_46874769
transcript_64303.nnic	chr18	+	951	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-47	318	-43	-122	multi-exon	FALSE	canonical	3	44	junction_1	29.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	NA	False	NA	24	True	NA	NA	NA	46868596	46875445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_64305.nnic	chr18	+	1240	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-216	198	-212	-2	multi-exon	FALSE	canonical	3	44	junction_1	29.5	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868427	46875565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_64310.nnic	chr18	+	1126	2	FSM	ENSG00000289168.1	ENST00000690991.1	1127	2	-1	2	-1	-2	multi-exon	FALSE	canonical	3	9	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868638	46875565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868969_46874769
transcript_64312.known	chr18	+	2893	16	FSM	ENSG00000167216.19	ENST00000356157.12	2893	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_13	11.712481471585	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	-1	True	NA	NA	False	AATAAA	-16	NA	46946834	47102243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_64313.nic	chr18	+	1984	16	NIC	ENSG00000167216.19	novel	2893	16	NA	NA	-7	22	combination_of_known_junctions	FALSE	canonical	2	9	junction_13	12.171003793169	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTAATGTTACTCAT	-7	True	NA	8	True	CATAAA	-15	NA	46946789	47101292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_46946924_47046456_47046528_47052879_47053047_47054398_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_64321.nic	chr18	+	1375	13	ISM	ENSG00000167216.19	ENST00000356157.12	2893	16	-45	24701	-7	0	5prime_fragment	FALSE	canonical	3	24	junction_3	6.2893207547044	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	-7	True	NA	11	True	AATAAA	-22	NA	46946789	47077542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_64323.nic	chr18	+	1372	13	NIC	ENSG00000167216.19	novel	2893	16	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	7.74596669241483	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	-7	True	NA	11	True	AATAAA	-22	NA	46946789	47077542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_46946924_47046456_47046528_47052879_47053047_47054398_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_6433.known	chr1	+	466	1	FSM	ENSG00000271992.1	ENST00000607679.1	466	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCGTGGTTTAGATTT	NA	False	NA	14	True	AATAAA	-15	NA	70445070	70445536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70445100_70445500
transcript_64350.known	chr18	-	1443	7	FSM	ENSG00000267228.7	ENST00000602459.6	1443	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	261.413731255435	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGTTCTTTAGCCCAAG	-9	True	NA	NA	False	NA	NA	NA	47176345	47108187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47176186
transcript_64353.known	chr18	-	788	4	FSM	ENSG00000167220.12	ENST00000587841.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	247.968187923819	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGTTCTCTGCTGTCTC	4	True	NA	NA	False	GGGGCT	-25	NA	47150476	47108377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47150377
transcript_64358.known	chr18	-	3229	1	FSM	ENSG00000167220.12	ENST00000588861.1	3229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	649	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTAGTGCATTTGCATA	NA	False	NA	-41	True	AATAAA	-22	NA	47110856	47107627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47107600_47110900
transcript_64359.known	chr18	-	2185	7	FSM	ENSG00000167220.12	ENST00000300605.11	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	202.81415959773	3235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTGTTTTTGTTTTTG	-20	True	NA	-9	True	AATAAA	-15	NA	47150500	47107409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47150377
transcript_64360.known	chr18	-	2224	7	FSM	ENSG00000167220.12	ENST00000588183.5	2224	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	169.707264298131	2599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTTGTTTTTGCA	-20	True	NA	-7	True	AATAAA	-17	NA	47150500	47107407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136301_47136450_47150377
transcript_64361.known	chr18	-	3679	3	FSM	ENSG00000134049.6	ENST00000256433.6	3679	3	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	38.5	3243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTCATTGATTTAT	-28	True	NA	NA	False	AGTAAA	-20	NA	47176364	47152833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47156233_47157435_47157538_47176186
transcript_64362.known	chr18	+	938	2	FSM	ENSG00000287673.1	ENST00000658369.1	938	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATTGTACTTTTCATTAA	NA	False	NA	NA	False	NA	NA	NA	47263934	47282939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_47264319_47282385
transcript_64373.known	chr18	-	12075	11	FSM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_10	84.9329147033116	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAGTTTTTACAGTCT	-15	True	NA	NA	False	AATAAA	-19	NA	47931141	47831550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
transcript_64390.known	chr18	-	1971	9	FSM	ENSG00000175387.16	ENST00000586040.5	1971	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	108.302527671334	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCTTAATGTGTTC	NA	False	NA	3	True	AATAAA	-36	NA	47896811	47841224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520
transcript_64391.known	chr18	-	828	6	FSM	ENSG00000175387.16	ENST00000586514.5	828	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	113.804393588297	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTATTTTTGCCTTCTG	27	True	NA	NA	False	AAAACA	-42	NA	47930837	47868326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930360_47930447_47930799
transcript_64392.known	chr18	+	5765	12	FSM	ENSG00000134030.14	ENST00000256413.8	5765	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	12.2420491991758	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGAGTCTGTGCTCTT	-17	True	NA	NA	False	AATAAA	-21	NA	48539030	48863217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_48539313_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758406_48761389_48761690_48817220_48817377_48857587_48857642_48859343
transcript_64395.known	chr18	+	4407	13	FSM	ENSG00000134030.14	ENST00000382998.8	4407	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.1566140804298	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGCTCCAGACATACTG	17	True	NA	15	True	TATAAA	-45	NA	48539157	48861906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_48539313_48539757_48539832_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758412_48761389_48761690_48817220_48817377_48857587_48857642_48859343
transcript_64399.known	chr18	-	5049	17	FSM	ENSG00000141627.14	ENST00000269445.10	5049	17	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_14	12.2365998136737	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	NA	False	NA	-13	True	AATAAA	-20	NA	49460802	49041473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_6440.known	chr1	-	2821	11	FSM	ENSG00000132485.14	ENST00000254821.10	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	207.628249523036	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGGTGTTTGTTAGAA	16	True	NA	-10	True	AATAAA	-17	NA	71081011	71063336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_71065138_71065677_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_64450.known	chr18	-	614	7	FSM	ENSG00000265681.8	ENST00000580261.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	3	7848	junction_6	2323.29139727815	208950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-14	True	NA	-29	True	AATAAA	-21	NA	49492465	49488480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492457
transcript_6446.known	chr1	-	2816	10	FSM	ENSG00000132485.14	ENST00000370920.8	2816	10	0	0	0	0	multi-exon	TRUE	canonical	3	363	junction_1	230.610997350008	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTTCATTTTTAAAC	-8	True	NA	-3	True	AATAAA	-22	NA	71081035	71063290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_71065138_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_64472.known	chr18	-	584	6	FSM	ENSG00000265681.8	ENST00000581373.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4874.62612309908	4221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-28	True	NA	-32	True	AATAAA	-18	NA	49492479	49488483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491531_49491585_49492457
transcript_64496.known	chr18	-	5548	3	FSM	ENSG00000177576.12	ENST00000318240.8	5548	3	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_2	116.5	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTTAATTTA	5	True	NA	-1	True	AATAAA	-30	NA	49487234	49477242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49482411_49483583_49483772_49487042
transcript_64498.known	chr18	-	758	8	FSM	ENSG00000265681.8	ENST00000583637.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_7	5730.14217866844	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACAAAAACTTAT	140	False	NA	-100	True	AAGAAA	-40	NA	49492399	49488551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492274
transcript_64499.known	chr18	-	684	7	FSM	ENSG00000265681.8	ENST00000578532.5	684	7	0	0	0	0	multi-exon	FALSE	canonical	3	1548	junction_6	4354.61053558945	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAGAAACTGAAGAAACA	19	True	NA	-109	True	AAGAAA	-31	NA	49492432	49488560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492274
transcript_64500.known	chr18	-	1440	7	FSM	ENSG00000215472.10	ENST00000584895.5	1440	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6158.54256072183	950	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATTCAGTTTAACTG	953	False	NA	24	True	TATAAA	-42	NA	49491586	49481680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49482411_49483583_49483772_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_64501.known	chr18	-	747	8	FSM	ENSG00000265681.8	ENST00000618619.4	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	5676.97325938348	26650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGTCCTTACAAGAT	57	False	49492512	-1	True	ATTAAA	-39	NA	49492482	49488452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492457
transcript_64502.known	chr18	-	859	6	FSM	ENSG00000265681.8	ENST00000579408.5	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	9021	junction_1	1717.09226310062	47448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	699	False	NA	-32	True	AATAAA	-18	NA	49491840	49488483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_64503.known	chr18	-	705	6	FSM	ENSG00000265681.8	ENST00000580210.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	5131.13864166619	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCATTAAAATAAATGT	725	False	NA	-66	True	AGTAAA	-1	NA	49491814	49488517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491625
transcript_64504.known	chr18	-	523	4	FSM	ENSG00000265681.8	ENST00000584364.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	9021	junction_1	2019.83431663755	4354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	1601	False	NA	-29	True	AATAAA	-21	NA	49490938	49488480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792
transcript_64505.known	chr18	-	795	6	FSM	ENSG00000265681.8	ENST00000617346.4	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_5	5162.76122244676	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAGTAGTTGCTCGG	56	False	49492512	NA	False	AAAAAG	-1	NA	49492483	49489358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_64506.known	chr18	-	827	6	FSM	ENSG00000265681.8	ENST00000580387.5	827	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	5289.13825117098	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCATGGTCGGATTA	18	True	NA	NA	False	NA	NA	NA	49492433	49489476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492257
transcript_64507.known	chr18	-	576	7	FSM	ENSG00000265681.8	ENST00000583036.5	576	7	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	6119.89941820034	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGAGCTCTCCCTGCCA	4	True	NA	NA	False	NA	NA	NA	49492508	49489451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492457
transcript_64508.known	chr18	+	10418	10	FSM	ENSG00000101670.12	ENST00000261292.9	10418	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.94405318873308	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTACCATATTACAT	-2	True	NA	NA	False	AATAAA	-21	NA	49562056	49599185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414_49581658_49582361_49582483_49583555_49583775_49586745_49586851_49590500
transcript_64511.known	chr18	+	1453	6	FSM	ENSG00000101670.12	ENST00000580036.5	1453	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.72763633939717	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGGCTATCAGTCCA	28	False	NA	NA	False	AATAAA	-18	NA	49562086	49581852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414
transcript_64513.known	chr18	-	1693	9	FSM	ENSG00000167306.20	ENST00000592688.1	1693	9	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_7	2.57087047515039	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGCTCAGAATAAAAACAC	-4	True	NA	-34	True	NA	NA	NA	49849846	49826289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566
transcript_64519.nic	chr18	-	1803	10	NIC	ENSG00000167315.18	novel	1840	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_9	313.265240828138	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	-16	True	NA	-28	True	AATAAA	-18	NA	49813962	49783502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813681
transcript_64520.nic	chr18	-	1752	10	NIC	ENSG00000167315.18	novel	1840	10	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	326.187403530888	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	-15	True	NA	-28	True	AATAAA	-18	NA	49813961	49783502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_64528.known	chr18	+	421	1	FSM	ENSG00000267322.3	ENST00000615535.1	421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCAGGAGGCGGCCGC	-7	True	NA	16	True	NA	NA	NA	49814022	49814443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_49814000_49814400
transcript_64529.known	chr18	-	2926	10	FSM	ENSG00000167315.18	ENST00000285093.15	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_9	132.472032920813	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTACATATTCT	-7	True	NA	-13	True	AATAAA	-19	NA	49813533	49782163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813468
transcript_64530.known	chr18	-	1657	10	FSM	ENSG00000167315.18	ENST00000587994.5	1657	10	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_9	285.04831732511	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-7	True	NA	-30	True	AATAAA	-16	NA	49813953	49783504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813816
transcript_64531.known	chr18	-	727	5	FSM	ENSG00000167315.18	ENST00000586485.5	727	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	422.721539550565	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAATATGCCCTGCAGTC	9	True	NA	NA	False	AAAACA	-23	NA	49813937	49794319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_64532.known	chr18	-	1824	8	FSM	ENSG00000172361.6	ENST00000398545.5	1824	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.1189138534559	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTACTTAATCTCATGT	16	True	NA	NA	False	AATAAA	-41	NA	50266495	50227192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50227610_50238602_50238706_50242899_50243117_50250757_50250977_50251480_50251785_50261063_50261238_50261989_50262220_50266335
transcript_64533.nic	chr18	-	742	2	ISM	ENSG00000172361.6	ENST00000398545.5	1824	8	-47	34492	-47	-34492	5prime_fragment	FALSE	canonical	3	7	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGTGGGTCATACCTATA	NA	False	NA	NA	False	AATAAA	-21	NA	50266542	50261684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_50262220_50266335
transcript_64534.nic	chr18	-	638	2	ISM	ENSG00000172361.6	ENST00000398545.5	1824	8	-41	34590	-41	-34590	5prime_fragment	FALSE	canonical	3	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATTGAAACCTGTTCA	-25	True	NA	NA	False	AATATA	-19	NA	50266536	50261782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_50262220_50266335
transcript_64541.known	chr18	-	2434	17	FSM	ENSG00000141644.18	ENST00000382948.9	2434	17	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	64.5798923814526	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTCCACTGTGACCCT	1	True	NA	NA	False	NA	NA	NA	50281774	50267516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50267664_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_64544.known	chr18	-	3009	17	FSM	ENSG00000141644.18	ENST00000269468.10	3009	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	58.5650012806283	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-12	True	NA	-5	True	TTTAAA	-31	NA	50281523	50268845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_64549.known	chr18	-	2473	17	FSM	ENSG00000141644.18	ENST00000457839.6	2473	17	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_5	34.4514490805539	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTATTTGGTGTGTTC	6846	False	NA	-28	True	AATAAA	-11	NA	50281466	50271049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_64555.known	chr18	-	3091	16	FSM	ENSG00000141644.18	ENST00000347968.7	3091	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	64.3368220124888	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGCTTAGTGTTTC	1	True	NA	-6	True	TTTAAA	-30	NA	50281774	50268846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_64559.known	chr18	-	4905	16	FSM	ENSG00000141644.18	ENST00000591416.5	4905	16	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	47.9773094516796	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	6	True	NA	-5	True	TTTAAA	-31	NA	50281769	50268845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_64560.nic	chr18	-	2634	16	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_5	42.0963973122008	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTGTTCCTCTGTGG	-12	True	NA	-20	True	AATAAA	-19	NA	50281787	50271041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_64569.known	chr18	-	1845	15	FSM	ENSG00000141644.18	ENST00000398493.5	1845	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	54.7966556405385	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTGCAGACTGGCT	11	True	NA	NA	False	NA	NA	NA	50281500	50271468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_64574.known	chr18	-	385	2	FSM	ENSG00000141644.18	ENST00000589758.1	385	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCACCTACTTAATAAA	36	True	NA	NA	False	TTTAAA	-44	NA	50281475	50279745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50280018_50281362
transcript_64579.known	chr18	-	2320	15	FSM	ENSG00000154832.16	ENST00000285106.11	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_9	30.6980854285669	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-7	True	NA	28	True	AATAAA	-17	NA	50287692	50282346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_64581.known	chr18	-	2423	14	FSM	ENSG00000154832.16	ENST00000673786.1	2423	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	81.8544674782864	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTGAAGAAACCAAGGA	0	True	NA	11	True	NA	NA	NA	50287839	50282363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_64594.known	chr18	-	2242	15	FSM	ENSG00000154832.16	ENST00000589940.5	2242	15	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	78.52703291198	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	661	False	NA	28	True	AATAAA	-17	NA	50287651	50282346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283325_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_64598.nnic	chr18	+	2607	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	83.1620007416064	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50374971	50394168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392849_50393209
transcript_64603.nnic	chr18	+	2528	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	78.2064249148315	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	-14	True	NA	14	True	AATAAA	-14	NA	50375000	50394168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392838_50393203
transcript_64604.nnic	chr18	+	2533	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	78.2064249148315	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	-14	True	NA	14	True	AATAAA	-14	NA	50375000	50394168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392849_50393209
transcript_64605.known	chr18	+	979	7	FSM	ENSG00000154839.10	ENST00000398452.6	979	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	49.0082192652983	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTGTGAACTTTTGAA	-10	True	NA	NA	False	NA	NA	NA	50375039	50392247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_64607.known	chr18	+	2849	7	FSM	ENSG00000154839.10	ENST00000285116.8	2849	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	29.4207976325139	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	-4	True	NA	14	True	AATAAA	-14	NA	50375045	50394168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_64611.known	chr18	+	746	6	FSM	ENSG00000154839.10	ENST00000494518.1	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	84.6819933634064	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACGTGTTACTGAATAT	11	False	NA	NA	False	CATAAA	-32	NA	50375060	50392160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50375240_50375819_50375919_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_64613.known	chr18	+	1095	6	FSM	ENSG00000154839.10	ENST00000417656.6	1095	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	77.5721599544579	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAGATGGGGTTTCACCA	-7	True	NA	NA	False	NA	NA	NA	50375042	50392549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50391123_50391294_50392098
transcript_64616.nic	chr18	+	788	5	ISM	ENSG00000154839.10	ENST00000398452.6	979	7	-68	6834	-68	-6747	5prime_fragment	FALSE	canonical	3	99	junction_1	59.7933942839842	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGCTTAATTATATTAA	NA	False	NA	NA	False	AATAAA	-21	NA	50374971	50385413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215
transcript_64619.nic	chr18	+	714	5	ISM	ENSG00000154839.10	ENST00000285116.8	2849	7	-45	8755	-39	-6747	5prime_fragment	FALSE	canonical	3	161	junction_1	35.686131760111	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGCTTAATTATATTAA	-14	True	NA	NA	False	AATAAA	-21	NA	50375000	50385413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215
transcript_64620.nnic	chr18	+	1179	2	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	137	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50374974	50394168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_50375195_50393209
transcript_64621.known	chr18	-	2129	8	FSM	ENSG00000134042.14	ENST00000585524.5	2129	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.49897938350513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTACAAGAAAAATCT	-17	True	NA	NA	False	NA	NA	NA	50820019	50798203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50799391_50800035_50800144_50801348_50801505_50805153_50805337_50806703_50806851_50809301_50809405_50819580_50819703_50819896
transcript_64622.known	chr18	-	1125	7	FSM	ENSG00000134042.14	ENST00000436348.6	1125	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.0368111930481	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACTGCTTTCACTTA	5316	False	NA	NA	False	AGTAAA	-2	NA	50820064	50799149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50799391_50800035_50800144_50801348_50801505_50805153_50805337_50806703_50806851_50819580_50819703_50819896
transcript_64623.known	chr18	-	1657	6	FSM	ENSG00000134042.14	ENST00000431965.6	1657	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5213633723318	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATACTCAATAATCATGC	5316	False	NA	NA	False	AGTAAA	-44	NA	50820064	50798461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50799391_50800035_50800144_50805153_50805337_50806703_50806851_50819580_50819703_50819896
transcript_64625.known	chr18	+	9031	16	FSM	ENSG00000082212.13	ENST00000321341.11	9031	16	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_13	34.5191734161369	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATGATCTTGTTTTT	-20	True	NA	7	True	AGTAAA	-19	NA	50879117	50954257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
transcript_64626.known	chr18	+	2127	13	FSM	ENSG00000082212.13	ENST00000639398.1	2127	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	125.247310904821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATGGGAACTACTGCTG	23	True	NA	-96	True	ACTAAA	-27	NA	50879160	50947784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
transcript_6463.nic	chr1	-	3966	7	NIC	ENSG00000132485.14	novel	1257	10	NA	NA	-40	-2159	intron_retention	FALSE	canonical	3	1028	junction_6	56.1337688027448	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGTAGAGAGCAAATTA	NA	False	NA	NA	False	NA	NA	NA	71081329	71067877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_64633.known	chr18	+	2211	4	FSM	ENSG00000141642.9	ENST00000269466.8	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	14.522013940528	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTAAAACATGCTCC	7	True	NA	NA	False	AATAAA	-18	NA	50968039	50988121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50968115_50974396_50974562_50984095_50984564_50986618
transcript_64634.known	chr18	+	694	4	FSM	ENSG00000141642.9	ENST00000588577.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	22.0151463012778	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTTGCCTTGGCCA	NA	False	NA	NA	False	NA	NA	NA	50967990	50986946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50968115_50974396_50974562_50984486_50984564_50986618
transcript_64635.nnic	chr18	+	934	3	NIC	ENSG00000141642.9	novel	2211	4	NA	NA	21	338	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	30.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCATCCTTTTTGAAGT	-21	True	NA	NA	False	AATAAA	-21	NA	50968011	50987284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_50968115_50974396_50974562_50986618
transcript_64636.nnic	chr18	-	788	3	Antisense	novelGene_ENSG00000141646.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGGTTGCCATATCTT	-14	True	NA	NA	False	AATAAA	-14	NA	51030103	51019145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_51019626_51019839_51019962_51029917
transcript_64639.known	chr18	+	1505	2	FSM	ENSG00000141642.9	ENST00000586966.2	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTAGTTGAGTAGTGAG	12	True	NA	NA	False	AATAAA	-17	NA	50968044	50969866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50968115_50968431
transcript_6464.nic	chr1	-	2978	7	NIC	ENSG00000132485.14	novel	1257	10	NA	NA	28	-3079	intron_retention	FALSE	canonical	3	1028	junction_6	56.1337688027448	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGTAGTTCAAATAAA	24	False	NA	NA	False	NA	NA	NA	71081261	71068797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_64641.known	chr18	+	779	3	FSM	ENSG00000141646.15	ENST00000588860.5	779	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	264.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATCCATATCACTACG	NA	False	NA	NA	False	NA	NA	NA	51028393	51048816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_51028666_51046919_51047296_51048685
transcript_64648.known	chr18	+	3188	2	FSM	ENSG00000227115.9	ENST00000578152.5	3188	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGCATGGACATAT	1	True	NA	NA	False	AATAAA	-21	NA	51392041	51468378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_51392258_51465406
transcript_64649.known	chr18	+	621	2	FSM	ENSG00000187323.12	ENST00000578080.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATATGTTTACTAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	52752059	52759092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_52752375_52758786
transcript_6465.nic	chr1	-	733	6	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	-40	6516	-40	-6516	5prime_fragment	FALSE	canonical	3	1028	junction_5	58.9080639641128	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGGGAAAGCAGTTGG	NA	False	NA	-66	True	AAAAAG	-7	NA	71081329	71072234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_64650.known	chr18	-	1237	3	FSM	ENSG00000134046.12	ENST00000398398.6	1237	3	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	197	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGAAATACCTTTCATT	-14	True	NA	-13	True	AATAAA	-35	NA	54224647	54202679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_54203127_54204997_54205158_54224017
transcript_64651.known	chr18	-	1182	3	FSM	ENSG00000134046.12	ENST00000583046.1	1182	3	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	177.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGGAAATACCTTTCAT	16	True	NA	-14	True	AATAAA	-34	NA	54224617	54202680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_54203103_54204997_54205158_54224017
transcript_64653.known	chr18	+	6020	10	FSM	ENSG00000101751.11	ENST00000579534.6	6020	10	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	43.9514322299254	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAGTCCAGAGTTTTC	-38	True	NA	7	True	AATAAA	-14	NA	54269516	54298234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_64654.nnic	chr18	+	2520	10	NNC	ENSG00000101751.11	novel	6020	10	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	112.317451344585	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	-10	True	NA	11	True	AATAAA	-18	NA	54269544	54294724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_54269700_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_64660.known	chr18	+	2030	9	FSM	ENSG00000101751.11	ENST00000406285.7	2030	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	127.507597812836	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCTGAAAAGCAAGGGAAT	-36	True	NA	NA	False	CATAAA	-20	NA	54269518	54294483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_64668.known	chr18	+	2096	8	FSM	ENSG00000166845.15	ENST00000648616.1	2096	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	61.842459491181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAGAGAACCTCCTCAT	556	False	NA	70	True	NA	NA	NA	54358481	54378845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54361892_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_64669.known	chr18	+	4056	8	FSM	ENSG00000166845.15	ENST00000382911.8	4056	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	33.4053643498606	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATGTTAAATAGAAAA	659	False	NA	NA	False	NA	NA	NA	54358584	54380368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54362432_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_6467.nic	chr1	-	712	5	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	-40	6753	-40	-6753	5prime_fragment	FALSE	canonical	3	1028	junction_4	62.1087755474216	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTATATTTTGGTGTT	NA	False	NA	-2	True	AATATA	-36	NA	71081329	71072471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_64679.known	chr18	+	7003	6	FSM	ENSG00000041353.10	ENST00000262094.10	7003	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.35646599662505	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTGTACTCAAAGCAAC	29	True	NA	NA	False	AATAAA	-21	NA	54828476	54895516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54828701_54877566_54877739_54879368_54879455_54884332_54884437_54887994_54888119_54889223
transcript_64684.known	chr18	-	8041	20	FSM	ENSG00000196628.20	ENST00000354452.8	8041	20	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	27.0847648602425	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGTTCATTTTCAAA	30	True	NA	NA	False	ATTAAA	-17	NA	55588192	55222184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_64686.known	chr18	-	3789	20	FSM	ENSG00000196628.20	ENST00000629387.2	3789	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_19	41.2653060665318	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACAAGTAAAGTT	1	True	NA	NA	False	AATACA	-29	NA	55589807	55226792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_64689.known	chr18	-	8317	20	FSM	ENSG00000196628.20	ENST00000356073.8	8317	20	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	29.5888726558068	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTCTTTTAGTATTATA	1217	False	NA	-3	True	TATAAA	-14	NA	55588629	55222333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_64694.known	chr18	-	2628	19	FSM	ENSG00000196628.20	ENST00000568740.5	2628	19	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	56.1646609159396	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAGAAAAAAGTGC	2	True	NA	NA	False	AAAACA	-11	NA	55589806	55227845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351001_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_64695.known	chr18	-	2372	13	FSM	ENSG00000196628.20	ENST00000457482.7	2372	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	53.1081182327356	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAATTAATTTGTAA	0	True	NA	NA	False	NA	NA	NA	55322222	55227682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55321669
transcript_64696.known	chr18	-	3163	13	FSM	ENSG00000196628.20	ENST00000570287.6	3163	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	54.9143272137002	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCCAATATTCAATC	4413	False	NA	NA	False	ACTAAA	-35	NA	55321986	55226643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55321669
transcript_64697.nnic	chr18	+	653	3	NNC	ENSG00000267284.2	novel	1719	9	NA	NA	-20	-153670	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCTGAGGTTCTCTCTTC	NA	False	NA	NA	False	AATAAA	-18	NA	55589883	55605452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_55589976_55597079_55597164_55604975
transcript_6470.known	chr1	-	1257	10	FSM	ENSG00000132485.14	ENST00000611683.1	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	190.010590997865	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGGCCAACCCCTACG	NA	False	NA	NA	False	ACTAAA	-10	NA	71081289	71065718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_64703.known	chr18	+	555	2	FSM	ENSG00000267284.2	ENST00000592936.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACGCAATTGGGAGAGAG	NA	False	NA	NA	False	NA	NA	NA	55721062	55759122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_55721535_55759039
transcript_64710.known	chr18	+	518	3	FSM	ENSG00000267327.2	ENST00000589440.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCAATTTCTCTGCATC	NA	False	NA	NA	False	NA	NA	NA	55893037	56023462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_55893443_56017727_56017780_56023401
transcript_64715.nnic	chr18	+	2065	3	Fusion	ENSG00000287248.1_ENSG00000267327.2	novel	518	3	NA	NA	-73	0	multi-exon	FALSE	canonical	1	1	junction_2	3	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCTAATTTCATGATT	NA	False	NA	NA	False	ATTAAA	-24	NA	55892964	56029186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr18_+_55893443_56017727_56017780_56027651
transcript_64716.nnic	chr18	+	2098	2	Fusion	ENSG00000287248.1_ENSG00000267327.2	novel	518	3	NA	NA	-158	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTATCTAATTTCATGATT	NA	False	NA	NA	False	ATTAAA	-24	NA	55892879	56029186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr18_+_55893443_56027651
transcript_6472.known	chr1	+	4608	4	FSM	ENSG00000229956.11	ENST00000455406.6	4608	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATAAAAGAATCCAAGAA	4457	False	NA	NA	False	NA	NA	NA	71081323	71241548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_71081414_71091663_71091705_71223056_71223115_71237129
transcript_64725.nnic	chr18	+	860	3	Fusion	ENSG00000267057.6_ENSG00000267327.2	novel	620	4	NA	NA	-117	0	multi-exon	TRUE	canonical	0	0	junction_1	2.5	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGCACAACTTATTTA	NA	False	NA	9	True	AATAAA	-24	NA	55892920	56096314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr18_+_55893443_56050079_56050178_56096074
transcript_64726.known	chr18	+	430	3	FSM	ENSG00000267057.6	ENST00000592045.5	430	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGCACAACTTATTTA	NA	False	NA	9	True	AATAAA	-24	NA	56042252	56096314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_56042345_56050079_56050178_56096074
transcript_64730.known	chr18	-	1339	10	FSM	ENSG00000091164.13	ENST00000590954.5	1339	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	355.314258399831	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTTTCTAAATCAG	5	True	NA	-13	True	AATAAA	-25	NA	56651128	56602821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342_56638506_56647448_56647536_56651016
transcript_64732.known	chr18	-	2035	10	FSM	ENSG00000091164.13	ENST00000587807.5	2035	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	398.963100493712	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTCTTTCTAAATC	NA	False	NA	-15	True	AATAAA	-23	NA	56651274	56602823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626161_56626267_56626360_56626458_56638342_56639040_56651016
transcript_64737.known	chr18	-	6840	8	FSM	ENSG00000091164.13	ENST00000217515.11	6840	8	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_1	56.4338153078815	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTGTATTTTGT	14	True	NA	NA	False	ATTAAA	-16	NA	56638592	56597208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
transcript_64740.known	chr18	-	502	2	FSM	ENSG00000091164.13	ENST00000586079.1	502	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGACTTTTATTGGATTT	88	False	NA	NA	False	NA	NA	NA	56651045	56647062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_56647536_56651016
transcript_64745.known	chr18	-	2604	4	FSM	ENSG00000258609.3	ENST00000553704.3	2604	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	15.121728296285	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	NA	False	NA	-1	True	AATAAA	-15	NA	57072119	57054557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_57056251_57057499_57058001_57069809_57070004_57071903
transcript_64746.known	chr18	+	10087	4	FSM	ENSG00000177511.6	ENST00000324000.4	10087	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTGGTTGTCTGTCAC	-17	True	NA	13	True	AATAAA	-24	NA	57352556	57368931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_57353026_57354401_57354525_57356912_57357471_57359994
transcript_64749.known	chr18	-	7689	11	FSM	ENSG00000066926.13	ENST00000262093.11	7689	11	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	18.2493835512326	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATATGCATAGACTGTT	-9	True	NA	NA	False	AGTAAA	-29	NA	57586702	57544376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580072_57580200_57586553
transcript_64751.known	chr18	-	2762	14	FSM	ENSG00000134440.12	ENST00000256854.10	2762	14	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_13	132.476636323533	2195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTTAATTTTCTT	-39	True	NA	-26	True	AATAAA	-20	NA	57621836	57600655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_57601784_57602354_57602487_57602811_57602944_57605856_57605971_57606615_57606752_57607133_57607334_57607443_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57620568_57620652_57621707
transcript_64757.known	chr18	+	1106	3	FSM	ENSG00000267040.7	ENST00000591854.5	1106	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	16.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGCTATATTATCAAACA	NA	False	NA	NA	False	AATAAA	-1	NA	57630301	57667636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_57630519_57641558_57642053_57667241
transcript_64758.known	chr18	+	1954	3	FSM	ENSG00000267040.7	ENST00000592201.1	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	8	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTAAGGCTAAAACTCA	5	True	NA	NA	False	AATAAA	-44	NA	57630349	57669296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_57630519_57641558_57642053_57668005
transcript_64761.nic	chr18	+	1305	3	NIC	ENSG00000267040.7	novel	1106	3	NA	NA	9	62720	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGGTAAGATTTTTTT	NA	False	NA	NA	False	ATTAAA	-1	NA	57630310	57732016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_57630519_57641558_57642053_57731413
transcript_64762.nnic	chr18	+	1287	3	Fusion	ENSG00000267040.7_ENSG00000267787.7	novel	1106	3	NA	NA	9	-2309	multi-exon	FALSE	canonical	3	14	junction_2	11	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCTTTTCCACTAAATT	NA	False	NA	NA	False	ATTAAA	-21	NA	57630310	57735735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr18_+_57630519_57641558_57642053_57735150
transcript_64768.known	chr18	+	4978	29	FSM	ENSG00000049759.20	ENST00000456173.6	4978	29	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	46.1201292987196	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	86	True	NA	NA	NA	58195389	58398157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_58195734_58245426_58245509_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_6477.known	chr1	-	525	5	FSM	ENSG00000225087.2	ENST00000666164.1	525	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTATGGGTCTCCTG	NA	False	NA	NA	False	AATAAA	-21	NA	72898976	72748918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_72749029_72749165_72749277_72766644_72766688_72850749_72850801_72898766
transcript_64770.known	chr18	+	4814	28	FSM	ENSG00000049759.20	ENST00000675865.1	4814	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.783119411199	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACTAAAAAAAAAAAAAAAAA	30	True	NA	83	True	NA	NA	NA	58195468	58398154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_58195734_58248898_58248938_58252000_58252055_58315981_58316033_58322424_58322487_58323231_58323335_58324995_58325163_58328994_58329128_58330737_58330915_58333817_58333893_58341037_58341170_58341677_58341798_58342905_58343104_58349536_58349615_58350990_58351046_58357193_58357253_58364267_58364334_58365998_58366229_58367745_58367868_58370396_58370468_58373173_58373270_58383245_58383320_58385525_58385587_58387438_58387499_58389084_58389193_58390645_58390743_58391486_58391560_58396166
transcript_64773.known	chr18	+	9289	17	FSM	ENSG00000172175.15	ENST00000649217.2	9289	17	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	12.2417063761552	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGTCTGTACAGACT	-2	True	NA	NA	False	TTTAAA	-29	NA	58671464	58754477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_58671853_58681169_58681337_58696365_58696488_58700440_58700592_58709377_58709557_58709975_58710073_58710920_58710954_58714082_58714110_58715934_58715968_58723047_58723252_58733396_58733575_58734306_58734382_58735201_58735330_58741864_58742015_58744337_58744496_58745665_58745792_58747404
transcript_64782.known	chr18	+	727	6	FSM	ENSG00000166562.9	ENST00000299714.7	727	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	347.506201383515	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-29	True	NA	15	True	AATAAA	-16	NA	59139874	59158832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152613_59155687_59155808_59157607_59157666_59158631
transcript_64784.known	chr18	+	791	6	FSM	ENSG00000166562.9	ENST00000587834.6	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_5	65.9302661908778	5486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-20	True	NA	15	True	AATAAA	-16	NA	59139883	59158832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59157607_59157666_59158631
transcript_6479.known	chr1	-	499	5	FSM	ENSG00000225087.2	ENST00000445976.1	499	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGCCTATGGGTCTCC	NA	False	NA	NA	False	AATAAA	-19	NA	72899140	72748920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_72749029_72749165_72749277_72850749_72850801_72898766_72898884_72899028
transcript_64791.known	chr18	+	718	5	FSM	ENSG00000166562.9	ENST00000588875.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	356.436880807809	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	-5	True	NA	15	True	AATAAA	-16	NA	59139898	59158832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59158631
transcript_64795.known	chr18	+	2054	4	FSM	ENSG00000166562.9	ENST00000509791.7	2054	4	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_3	69.5045961709648	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTATTCTTTTTGTAC	-38	True	NA	NA	False	AATAAA	-17	NA	59139865	59157311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687
transcript_64797.known	chr18	+	1088	3	FSM	ENSG00000166562.9	ENST00000585864.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	46.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCATTTACCTTTATG	-20	True	NA	NA	False	AGTAAA	-23	NA	59139883	59153361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535
transcript_64803.known	chr18	+	824	3	FSM	ENSG00000134443.10	ENST00000529320.2	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	6	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGGCTGTTCTCTTAT	13	False	NA	20	True	AATAAA	-21	NA	59220171	59230770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59220405_59225491_59225716_59230403
transcript_64804.known	chr18	+	858	3	FSM	ENSG00000134443.10	ENST00000256857.7	858	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGCTGTTCTCTTATT	-1	True	NA	21	True	AATAAA	-22	NA	59220157	59230771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59220405_59225491_59225735_59230403
transcript_64805.known	chr18	-	4824	13	FSM	ENSG00000074695.6	ENST00000251047.6	4824	13	0	0	0	0	multi-exon	TRUE	canonical	3	535	junction_5	49.6914787016401	3237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTCCTTCATTGA	-5	True	NA	-19	True	AATAAA	-17	NA	59359265	59327822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_59331130_59331417_59331540_59333090_59333245_59338556_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_64814.known	chr18	+	1899	2	FSM	ENSG00000141682.12	ENST00000316660.7	1899	2	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	0	2241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTGTGTTAATTTT	0	True	NA	29	True	ATTAAA	-14	NA	59899995	59904305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59900236_59902646
transcript_64815.known	chr18	+	1262	3	FSM	ENSG00000141682.12	ENST00000269518.9	1262	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAGTTAATTTTT	20	False	NA	-5	True	AATAAA	-39	NA	59900015	59903537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59900236_59900427_59900579_59902646
transcript_64816.known	chr18	-	664	1	FSM	ENSG00000267742.1	ENST00000591086.1	664	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGGTTTTTATGTAG	NA	False	NA	NA	False	NA	NA	NA	60017441	60016777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_60016800_60017400
transcript_64817.known	chr18	+	790	1	FSM	ENSG00000242060.1	ENST00000472161.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	236	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	27	False	NA	NA	False	NA	NA	NA	60149575	60150365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_60149600_60150400
transcript_64818.known	chr18	-	348	1	FSM	ENSG00000243256.1	ENST00000482744.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGCAAAATTTCCCTTT	70	False	NA	NA	False	NA	NA	NA	61405205	61404857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_61404900_61405200
transcript_6482.known	chr1	-	603	4	FSM	ENSG00000225087.2	ENST00000666853.1	603	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTTTGGCCTAAAGG	NA	False	NA	NA	False	AATAAA	-2	NA	72898831	72748832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_72749277_72766644_72766688_72850749_72850801_72898766
transcript_64823.known	chr18	-	653	2	FSM	ENSG00000267279.3	ENST00000586949.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAACTGCTTATTTCC	15	True	NA	2	True	AATAAA	-18	NA	61606916	61606067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_61606655_61606850
transcript_64824.known	chr18	+	2143	3	FSM	ENSG00000260440.3	ENST00000663426.1	2143	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAGAGATTTTTAAAA	6	True	NA	NA	False	NA	NA	NA	61748184	61758464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_61748301_61748720_61748821_61756537
transcript_64826.known	chr18	-	7936	31	FSM	ENSG00000197563.11	ENST00000640252.2	7936	31	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_29	44.4104717380935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTCTTATGATTTGA	-36	True	NA	NA	False	AATAAA	-18	NA	62187056	62041163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62162252_62162330_62163530_62163657_62186843
transcript_64829.known	chr18	-	4456	30	FSM	ENSG00000197563.11	ENST00000400334.7	4456	30	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_28	37.8268160736365	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTTTATGGTATACCAG	-18	True	NA	66	True	NA	NA	NA	62187038	62044548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_64832.known	chr18	-	6045	29	FSM	ENSG00000197563.11	ENST00000640876.1	6045	29	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_28	22.6194110246496	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCCTCCTGGGCTCA	-36	True	NA	NA	False	NA	NA	NA	62187056	62042851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_64834.known	chr18	-	4505	29	FSM	ENSG00000197563.11	ENST00000640145.1	4505	29	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_28	39.5315038408402	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTAAAGGGTGCTCAG	NA	False	NA	-14	True	AATAAA	-13	NA	62187077	62044233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62187022
transcript_64835.known	chr18	-	4195	26	FSM	ENSG00000197563.11	ENST00000638167.1	4195	26	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_14	42.5657890799642	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTACAACATTGTAAAGG	22	True	NA	-22	True	AATAAA	-5	NA	62186998	62044241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_64846.known	chr18	-	1853	5	FSM	ENSG00000197563.11	ENST00000589720.6	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	38.2058568808501	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCTGGCCTGATTTTCAT	5	True	NA	NA	False	NA	NA	NA	62187015	62153444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_64848.nnic	chr18	+	773	3	Antisense	novelGene_ENSG00000197563.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTTGTGTTGCCTTCT	NA	False	NA	3	True	AATAAA	-16	NA	61894537	61905612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_+_61894721_61901462_61901635_61905194
transcript_64850.nnic	chr18	+	685	3	Antisense	novelGene_ENSG00000197563.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGCCTTCTGCTA	NA	False	NA	7	True	AATAAA	-20	NA	61894537	61905616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_+_61894721_61901462_61901635_61905286
transcript_64853.known	chr18	-	2367	15	FSM	ENSG00000197563.11	ENST00000638329.1	2367	15	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	50.3629682547462	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTAAAAAAATCTCT	-29	True	NA	NA	False	NA	NA	NA	62187049	62112564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_64854.known	chr18	+	6178	29	FSM	ENSG00000134444.15	ENST00000398130.6	6178	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	35.8882015459689	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTGCCATAATTACTAA	-9	True	NA	NA	False	ATTAAA	-16	NA	62187273	62307829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268868_62268949_62273979_62274087_62275373_62275474_62280359_62280443_62280645_62280710_62282305_62282445_62287350_62287468_62291542_62291632_62298789_62298861_62305413
transcript_64855.nic	chr18	+	1400	2	ISM	ENSG00000134444.15	ENST00000587725.5	3268	22	-38	63798	-2	-15677	5prime_fragment	FALSE	canonical	3	131	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAGCAAATAAATAAA	-30	True	NA	NA	False	ATTAAA	-7	NA	62187252	62211773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_62188032_62211152
transcript_64856.known	chr18	+	5579	30	FSM	ENSG00000134444.15	ENST00000256858.10	5579	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	36.4678934580806	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTGATTTGGTTTGG	-25	True	NA	12	True	AATAAA	-13	NA	62187257	62307112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268868_62268949_62269410_62269513_62273979_62274087_62275373_62275474_62279773_62279857_62280645_62280710_62282305_62282445_62287350_62287468_62291542_62291632_62298789_62298861_62305413
transcript_64857.known	chr18	+	8617	29	FSM	ENSG00000134444.15	ENST00000644646.2	8617	29	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	16.6722227133661	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTCTAATTTATTTTT	-28	True	NA	NA	False	ATTAAA	-38	NA	62187254	62310249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331_62232428_62244763_62244877_62252663_62252755_62255406_62255479_62257947_62258089_62258511_62258677_62261510_62261659_62263988_62264146_62264728_62264853_62266700_62266750_62268868_62268949_62273979_62274087_62275373_62275474_62279773_62279857_62280645_62280710_62282305_62282445_62287350_62287468_62291542_62291632_62298789_62298861_62305413
transcript_64858.known	chr18	+	575	2	FSM	ENSG00000141655.17	ENST00000592013.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCTCTGGAAGACAAA	17	False	NA	NA	False	NA	NA	NA	62325325	62336786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_62325428_62336313
transcript_64862.known	chr18	-	5143	10	FSM	ENSG00000119537.18	ENST00000645214.2	5143	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	10.9081462366888	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTATCTAGAAGTTTG	-7	True	NA	-3	True	AATAAA	-29	NA	63367206	63327725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_64865.known	chr18	+	785	2	FSM	ENSG00000267390.2	ENST00000589905.2	820	2	33	2	33	-2	multi-exon	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGTGGTTTATTAT	2	True	NA	5	True	AATAAA	-21	NA	63367327	63381629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_63367860_63381376
transcript_64866.known	chr18	-	3337	11	FSM	ENSG00000119541.10	ENST00000238497.10	3337	11	0	0	0	0	multi-exon	TRUE	canonical	3	310	junction_5	38.2653890611346	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTTCAATGACTTT	-10	True	NA	1	True	ATTAAA	-23	NA	63422476	63389189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63391077_63393408_63393550_63397033_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
transcript_64867.known	chr18	-	551	4	FSM	ENSG00000119541.10	ENST00000591519.1	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	4.54606056566195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTATTTGAATTGTTTT	-4	True	NA	NA	False	ATTAAA	-16	NA	63422390	63407375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63407500_63410289_63410447_63411466_63411579_63422232
transcript_64869.known	chr18	-	1707	8	FSM	ENSG00000206073.11	ENST00000341074.10	1707	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	2.35606035749581	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTTACCTGTTTTC	1	True	NA	NA	False	AATAAA	-18	NA	63644256	63637258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63638124_63639184_63639341_63639633_63639777_63640873_63640992_63641759_63641889_63643160_63643218_63643412_63643604_63644208
transcript_6487.nic	chr1	-	730	4	NIC	ENSG00000225087.2	novel	499	5	NA	NA	-180	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTATGGGTCTCCTG	NA	False	NA	NA	False	AATAAA	-21	NA	72899420	72748918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_72749029_72749165_72749277_72898766_72898884_72899028
transcript_64871.known	chr18	+	3387	7	FSM	ENSG00000166401.15	ENST00000353706.6	3387	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATCTTTGTATGGACAT	9882	False	NA	NA	False	AATAAA	-23	NA	63970028	63989371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_63970188_63978298_63978477_63979800_63979939_63981720_63981839_63983578_63983722_63985092_63985246_63986873
transcript_64872.known	chr18	+	3321	7	FSM	ENSG00000166401.15	ENST00000397985.7	3321	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.46249406456535	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTATGGACATATG	-9	True	NA	NA	False	AATAAA	-26	NA	63970080	63989374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_63970171_63978298_63978477_63979800_63979939_63981720_63981839_63983578_63983722_63985092_63985246_63986873
transcript_64876.nnic	chr18	+	812	5	NNC	ENSG00000221887.6	novel	2102	4	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	6.49519052838329	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	NA	False	NA	8	True	AATAAA	-16	NA	63949230	63961835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157_63960276_63961635
transcript_64877.known	chr18	+	2102	4	FSM	ENSG00000221887.6	ENST00000408945.5	2102	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.09120616516523	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	5	True	NA	8	True	AATAAA	-16	NA	63949300	63961835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157
transcript_64880.known	chr18	-	796	2	FSM	ENSG00000179676.7	ENST00000665461.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCTCCTTATTTTCAT	NA	False	NA	NA	False	ATTAAA	-36	NA	64084361	64079988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_64080403_64083979
transcript_64881.nic	chr18	+	772	3	NIC	ENSG00000081138.14	novel	3766	11	NA	NA	-1	-470	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTCTTTTCATTTGTTA	-2	True	NA	NA	False	AATAAA	-17	NA	65751010	65803340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_65751151_65762646_65763053_65803114
transcript_64882.known	chr18	+	173	1	FSM	ENSG00000265936.1	ENST00000579213.1	173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACATTTGAATAAATTAT	NA	False	NA	NA	False	NA	NA	NA	67375132	67375305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_67375100_67375300
transcript_64884.known	chr18	-	4737	16	FSM	ENSG00000166479.10	ENST00000299608.7	4737	16	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_7	19.0550080906132	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTATTTTTACTGT	-13	True	NA	0	True	AATAAA	-19	NA	68715108	68673687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_64887.known	chr18	-	1509	15	FSM	ENSG00000166479.10	ENST00000564631.5	1509	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	39.3200499304186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTTATTCGTATTTTG	18	True	NA	NA	False	NA	NA	NA	68715077	68676838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_64889.nic	chr18	-	1981	10	NIC	ENSG00000166479.10	novel	710	9	NA	NA	-43	536	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	48.4464831375309	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGAAGTATGATTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	68715151	68687880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_68689055_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_64893.known	chr18	-	937	8	FSM	ENSG00000166479.10	ENST00000562706.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	16.6990162242314	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTACAAGTGGTGGAT	37	True	NA	NA	False	AATAAA	-36	NA	68715058	68696935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_6491.known	chr1	-	552	3	FSM	ENSG00000225087.2	ENST00000671099.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTCTTTGGCCTAAAGG	NA	False	NA	NA	False	AATAAA	-2	NA	72898831	72748832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_72749277_72766644_72766688_72898766
transcript_64913.known	chr18	+	1859	4	FSM	ENSG00000150636.17	ENST00000580292.2	1859	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.34209919681348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTCTGT	5	True	NA	NA	False	AATAAA	-21	NA	68715312	68755005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_68715362_68716527_68716595_68734733_68734767_68753295
transcript_64918.nic	chr18	+	378	3	NIC	ENSG00000150636.17	novel	597	3	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAAGTCTGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	68715177	68718130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_68715362_68716527_68716595_68718003
transcript_64920.known	chr18	+	597	3	FSM	ENSG00000150636.17	ENST00000582077.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAAGTCTGTATTT	-32	True	NA	NA	False	AATAAA	-15	NA	68715208	68718130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_68715612_68716527_68716595_68718003
transcript_64923.nic	chr18	+	751	2	ISM	ENSG00000150636.17	ENST00000580292.2	1859	4	-135	37911	-31	-1036	5prime_fragment	FALSE	canonical	3	16	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGATGTGGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	68715177	68717094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_68715362_68716527
transcript_64924.nic	chr18	+	966	2	ISM	ENSG00000150636.17	ENST00000582077.5	597	3	2	1038	2	-1038	5prime_fragment	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCAGATGTGGTGGC	-30	True	NA	NA	False	NA	NA	NA	68715210	68717092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_68715612_68716527
transcript_64926.nnic	chr18	+	751	2	NNC	ENSG00000150636.17	novel	597	3	NA	NA	8	-1036	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGATGTGGTGGCAC	2	True	NA	NA	False	NA	NA	NA	68715242	68717094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_68715427_68716527
transcript_64931.known	chr18	+	5703	2	FSM	ENSG00000170677.6	ENST00000397942.4	5703	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTAGTCTACTTA	15	True	NA	9	True	AATAAA	-18	NA	70289044	70330199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_70289091_70324542
transcript_64937.known	chr18	-	6721	11	FSM	ENSG00000166342.19	ENST00000327305.11	6721	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	9.59166304662544	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATTTGTACTCTTTATT	-7	True	NA	-2	True	AATAAA	-23	NA	72867987	72743755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_72748165_72749013_72749089_72750061_72750621_72756033_72756148_72783677_72783907_72794116_72794245_72794362_72794405_72858825_72859075_72864807_72864946_72865187_72865242_72867263
transcript_64941.nnic	chr18	-	1396	5	NNC	ENSG00000166342.19	novel	575	4	NA	NA	-98	2425	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	19.904459299363	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAGTTTGAGACAATT	886	False	NA	NA	False	AATAAA	-20	NA	72867471	72856554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_72857302_72858825_72859075_72864807_72864946_72865187_72865242_72867263
transcript_64942.nnic	chr18	+	491	3	NIC	ENSG00000263958.3	novel	2957	2	NA	NA	-60	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATTCTGTTTTATTT	NA	False	NA	4	True	AATAAA	-16	NA	72868327	72881397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_72868463_72880086_72880235_72881189
transcript_64943.known	chr18	+	457	3	FSM	ENSG00000263958.3	ENST00000578967.2	562	3	103	2	59	-1	multi-exon	FALSE	canonical	2	2	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATTCTGTTTTATTT	40	False	NA	4	True	AATAAA	-16	NA	72869039	72881397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_72869141_72880086_72880235_72881189
transcript_64944.known	chr18	+	285	2	FSM	ENSG00000263958.3	ENST00000580564.1	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTCTGTTTTATTTTG	NA	False	NA	6	True	AATAAA	-18	NA	72868387	72881399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_72868463_72881189
transcript_64945.known	chr18	+	1285	4	FSM	ENSG00000261780.3	ENST00000659659.1	1285	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	8.99382504215469	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTTTTATAATTTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	73325109	73349878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_73325194_73326901_73327189_73332462_73332582_73349083
transcript_64947.known	chr18	+	1167	3	FSM	ENSG00000261780.3	ENST00000666831.1	1167	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTTTTATAATTTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	73324940	73349878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_73325194_73332462_73332582_73349083
transcript_64951.known	chr18	+	821	4	FSM	ENSG00000075336.12	ENST00000579071.1	821	4	0	0	0	0	multi-exon	TRUE	canonical	3	344	junction_1	23.3285709425636	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTATTCATTTTATAT	6412	False	NA	10	True	AATAAA	-15	NA	74155174	74158786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74155208_74155305_74155404_74158013_74158088_74158170
transcript_64955.known	chr18	-	718	5	FSM	ENSG00000166347.19	ENST00000299438.13	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	770.316290558625	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCGTGTTTGCCTGTTT	982	False	NA	-15	True	AATATA	-17	NA	74291041	74253295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74290887
transcript_64959.known	chr18	-	3231	5	FSM	ENSG00000166347.19	ENST00000340533.9	3231	5	0	0	0	0	multi-exon	FALSE	canonical	3	1744	junction_2	49.1655367101794	5623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGACTTGCCCTGAATT	-2	True	NA	0	True	AATAAA	-18	NA	74291963	74250845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74291746
transcript_64960.known	chr18	-	776	6	FSM	ENSG00000166347.19	ENST00000494131.6	776	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	889.985932473092	5834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	26	True	NA	-16	True	AATATA	-16	NA	74291935	74253296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74255776_74256829_74256854_74260914_74260945_74263348_74263478_74291746
transcript_64961.known	chr18	-	5913	4	FSM	ENSG00000166347.19	ENST00000583418.1	5913	4	0	0	0	0	multi-exon	FALSE	canonical	3	1753	junction_3	44.1688678696759	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	4	True	NA	-16	True	AATATA	-16	NA	74291957	74253296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74260945_74263348_74263478_74291746
transcript_64962.known	chr18	-	619	4	FSM	ENSG00000166347.19	ENST00000397914.4	619	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	847.332677681362	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAAGAACTGTCCT	-12	True	NA	-88	True	AATATA	-31	NA	74291973	74253437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74255776_74263348_74263478_74291746
transcript_6497.nic	chr1	-	970	3	ISM	ENSG00000162620.16	ENST00000370911.7	1591	4	-34	2420	-5	-2104	5prime_fragment	FALSE	canonical	2	5	junction_2	0.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATTGTAGAGAAACAAA	-19	True	NA	NA	False	ATTAAA	-16	NA	74198181	74182326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_74182862_74183435_74183685_74197995
transcript_64973.known	chr18	+	4975	12	FSM	ENSG00000133313.15	ENST00000324262.9	4975	12	0	0	0	0	multi-exon	FALSE	canonical	1	696	junction_9	333.339327769792	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGACCAGTTTTTTTTA	6	True	NA	13	True	AATAAA	-24	NA	74496362	74523454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_64996.nic	chr18	+	896	6	NIC	ENSG00000133313.15	novel	4975	12	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_5	679.979234977069	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCTGGGTGCAGT	5	True	NA	18	True	AATAAA	-19	NA	74496280	74509335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74509138
transcript_65.known	ERCC-00154	+	521	1	FSM	ERCC-00154A	DQ854997	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00154_+_0_500
transcript_65001.known	chr18	+	586	2	FSM	ENSG00000133313.15	ENST00000580229.1	586	2	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTGACTGGATGAGT	5	True	NA	NA	False	NA	NA	NA	74496361	74498024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74496432_74497508
transcript_65002.known	chr18	+	2653	12	FSM	ENSG00000133313.15	ENST00000579847.5	2653	12	0	0	0	0	multi-exon	TRUE	canonical	1	502	junction_1	463.241436077531	2344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCTCAGTTGCTCGTC	-50	True	NA	23	True	AATAAA	-30	NA	74496306	74521131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_65003.known	chr18	+	601	4	FSM	ENSG00000133313.15	ENST00000583399.5	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_1	230.385666992449	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCGTGCCCAGAGGAAAGG	-50	True	NA	NA	False	NA	NA	NA	74496306	74506028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848
transcript_65004.known	chr18	+	897	4	FSM	ENSG00000133313.15	ENST00000584768.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	1729	junction_3	58.970802568352	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCTGGGTGCAGTG	22	False	NA	19	True	AATAAA	-20	NA	74499940	74509336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74500034_74501328_74501473_74505848_74506012_74508839
transcript_65005.known	chr18	+	536	4	FSM	ENSG00000133313.15	ENST00000577355.2	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	806.392102033634	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCTGGGTGCAGT	171	False	NA	18	True	AATAAA	-19	NA	74501385	74509335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74501473_74505848_74506012_74508839_74508929_74509138
transcript_65007.known	chr18	-	951	2	FSM	ENSG00000264247.2	ENST00000577806.1	951	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTGGGACCCAGGC	877	False	NA	NA	False	NA	NA	NA	74597569	74593200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74597257
transcript_65008.known	chr18	-	2418	2	FSM	ENSG00000264247.2	ENST00000652782.1	2418	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTTGTGTTAACTAG	-13	True	NA	NA	False	AATAAA	-21	NA	74597833	74592827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74596427
transcript_65009.known	chr18	-	756	2	FSM	ENSG00000264247.2	ENST00000585279.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGACAACAAAATATGC	20	True	NA	NA	False	NA	NA	NA	74597800	74593148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74597735
transcript_65010.known	chr18	-	1076	2	FSM	ENSG00000264247.2	ENST00000657978.1	1076	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTCACTTCAAGGACTT	NA	False	NA	NA	False	AATAAA	-9	NA	74598835	74592839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74598759
transcript_65011.known	chr18	-	7518	2	FSM	ENSG00000180011.7	ENST00000322342.4	7518	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATGTGTAGAGCGT	11	True	NA	NA	False	AATAAA	-15	NA	75209139	75195112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_75202341_75208849
transcript_65012.known	chr18	+	631	3	FSM	ENSG00000265778.4	ENST00000657360.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTGCGCAGAGTTTGC	-3	True	NA	NA	False	AAAACA	-22	NA	76491628	76493168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76491690_76492175_76492334_76492756
transcript_65013.known	chr18	+	1200	2	FSM	ENSG00000265778.4	ENST00000581996.3	1225	2	23	2	23	-2	multi-exon	FALSE	canonical	3	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTGCGCAAGTTGATC	20	False	NA	NA	False	AATAAA	-25	NA	76491651	76493918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76491690_76492756
transcript_65018.known	chr18	+	2076	2	FSM	ENSG00000275763.3	ENST00000622985.1	2076	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCCCTTGCTATTGTCT	12	False	NA	NA	False	AATAAA	-16	NA	76495520	76498088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76495787_76496278
transcript_65019.known	chr18	+	980	2	FSM	ENSG00000266256.3	ENST00000655002.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGAAATTTGTTGCTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	76619396	76623562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76619571_76622756
transcript_65020.known	chr18	+	1371	2	FSM	ENSG00000266256.3	ENST00000666531.1	1371	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATTTGTTGCTTCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	76619458	76623564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76620022_76622756
transcript_65021.nic	chr18	+	1462	9	ISM	ENSG00000130856.17	ENST00000320610.14	10157	31	-24	91419	-24	0	5prime_fragment	FALSE	canonical	2	7	junction_1	7.15454401062709	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAGAAGAAGTCACCG	-27	True	NA	NA	False	GATAAA	-14	NA	76822532	76881482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_76822663_76849525_76849669_76851774_76851940_76868684_76868864_76871700_76871826_76875491_76875665_76878008_76878153_76880112_76880317_76881283
transcript_65024.known	chr18	+	10157	31	FSM	ENSG00000130856.17	ENST00000320610.14	10157	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	10.040196987886	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTATATTTACTTCTT	-3	True	NA	NA	False	AATAAA	-25	NA	76822556	76972901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76822663_76849525_76849669_76851774_76851940_76868684_76868864_76871700_76871826_76875491_76875665_76878008_76878153_76880112_76880317_76881283_76881513_76895012_76895286_76899018_76899223_76904379_76904522_76905154_76905416_76908319_76908574_76910067_76910170_76910659_76910812_76912243_76912348_76913746_76913899_76915646_76915860_76919775_76920059_76923070_76923175_76925188_76925555_76927036_76927183_76927276_76927518_76927926_76928107_76937155_76937344_76947520_76947653_76955984_76956183_76959686_76959817_76960678_76960856_76968214
transcript_65025.known	chr18	-	531	4	FSM	ENSG00000197971.16	ENST00000490754.5	531	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	20.6074420214316	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGACGAGCTCCAGACCA	518	False	NA	NA	False	NA	NA	NA	77133683	77017069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_77017269_77066297_77066386_77105210_77105287_77133515
transcript_65032.nnic	chr18	+	673	2	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-121	16685	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	77421497	77577729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77422025_77577583
transcript_65033.nnic	chr18	+	1577	2	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-89	-110370	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTTTGGACATCCAAT	NA	False	NA	NA	False	AATAAA	-24	NA	77421529	77450674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77422025_77449592
transcript_65034.known	chr18	-	471	2	FSM	ENSG00000263146.3	ENST00000572007.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGCACGCTGCTTTCG	2151	False	NA	NA	False	NA	NA	NA	78977883	78977287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_78977430_78977554
transcript_65035.known	chr18	-	1256	2	FSM	ENSG00000263146.3	ENST00000575722.1	1256	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTGCAATGTTGTT	1191	False	NA	NA	False	ATTAAA	-19	NA	78978843	78976554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_78977430_78978462
transcript_65036.known	chr18	+	838	3	FSM	ENSG00000256463.10	ENST00000573324.1	838	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	22.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAAATGTGATTATTTG	311	False	NA	NA	False	AATAAA	-16	NA	78994797	79002677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_78994906_78995121_78995463_79002288
transcript_65039.known	chr18	+	1650	5	FSM	ENSG00000166377.21	ENST00000586722.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	35.5694742721902	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAACCCCATCAAAAAG	-4	True	NA	NA	False	AAGAAA	-5	NA	79069407	79116082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79114993
transcript_6504.known	chr1	+	1426	5	FSM	ENSG00000254685.8	ENST00000534056.5	1426	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	28.7967011999639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAAAATGGCATACT	2	True	NA	NA	False	NA	NA	NA	74198266	74206223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390_74204457_74205218
transcript_65041.known	chr18	+	549	4	FSM	ENSG00000166377.21	ENST00000589326.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	36.8088153692684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAGAGTTCAATAATGT	NA	False	NA	NA	False	ATTAAA	-17	NA	79307111	79332998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_79307235_79329140_79329303_79330011_79330105_79332827
transcript_65042.nnic	chr18	-	901	2	Genic_Genomic	ENSG00000274828.1	novel	2072	1	NA	NA	-4	2	multi-exon	FALSE	canonical	3	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAAAGTTTTCCTTT	-14	True	NA	-6	True	ATTAAA	-16	NA	79679362	79677284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr18_-_79678029_79679205
transcript_65043.known	chr18	-	2072	1	FSM	ENSG00000274828.1	ENST00000616428.1	2072	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCTAAAGTTTTCCT	-10	True	NA	-8	True	ATTAAA	-14	NA	79679358	79677286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79677300_79679400
transcript_65044.known	chr18	+	3228	12	FSM	ENSG00000060069.18	ENST00000591598.5	3228	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	86.9172685388119	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCTTCTCGTGGGTGTG	278	False	NA	18	True	AATAAA	-15	NA	79680151	79754503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_79680262_79695224_79695309_79695976_79696071_79697859_79697989_79704766_79704918_79710345_79710437_79712971_79713139_79714490_79715529_79717534_79717677_79717809_79718017_79728906_79729070_79753651
transcript_65048.known	chr18	-	803	4	FSM	ENSG00000141759.15	ENST00000355491.5	803	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	636.689528385347	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTGAGAGGAGCAGGCCT	26	True	NA	36	True	AATAAA	-8	NA	79988536	79973524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79976717_79976788_79977597_79977702_79988239
transcript_6505.known	chr1	+	4692	4	FSM	ENSG00000254685.8	ENST00000370898.9	4692	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	4.08248290463863	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATACTCTGAAATTGTCA	-23	True	NA	NA	False	AATAAA	-16	NA	74198241	74208702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390
transcript_65050.nic	chr18	-	886	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	81	1	combination_of_known_junctions	FALSE	canonical	3	174	junction_2	610.975176800716	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCGTTTTGCATACT	-1	True	NA	0	True	AGTAAA	-22	NA	79988421	79973405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_65051.known	chr18	-	546	4	FSM	ENSG00000141759.15	ENST00000592957.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	696.500299114556	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	76	False	NA	-25	True	AATAAA	-20	NA	80033891	79973512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79977597_79977702_80030520_80030578_80033850
transcript_65052.nic	chr18	-	899	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	174	junction_2	610.975176800716	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	21	True	NA	-25	True	AATAAA	-20	NA	79988541	79973512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_65056.known	chr18	-	3472	3	FSM	ENSG00000141759.15	ENST00000269601.10	3472	3	0	0	0	0	multi-exon	FALSE	canonical	3	1382	junction_2	48	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTAAGTTTATTGTAT	-1	True	NA	-18	True	GATAAA	-15	NA	79988563	79970812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79977597_79977702_79988239
transcript_65059.known	chr18	-	1185	3	FSM	ENSG00000141759.15	ENST00000585474.5	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	722	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAATAGGAGAGCTAT	-18	True	NA	-6	True	AATAAA	-22	NA	80033949	79972874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79977597_79977702_80033850
transcript_65064.known	chr18	-	752	2	FSM	ENSG00000141759.15	ENST00000588162.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	0	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGCGTTTTGCATAC	21	True	NA	-1	True	AGTAAA	-21	NA	79988541	79973406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79988239
transcript_65066.known	chr18	-	448	2	FSM	ENSG00000141759.15	ENST00000586612.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGAAATAAACAAGCACGTG	-4	True	NA	19	True	NA	NA	NA	79986734	79973541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79986601
transcript_65068.known	chr18	+	5590	7	FSM	ENSG00000101546.13	ENST00000306735.10	5590	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	21.1141079744221	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATACTTTCTTTTT	-1	True	NA	111	True	AATAAA	-22	NA	80034433	80050651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80042134_80042220_80044211_80044286_80045773
transcript_65069.known	chr18	+	1219	6	FSM	ENSG00000101546.13	ENST00000262197.7	1219	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	49.8678252984828	2659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAATAGTGTCTCTGA	-10	True	NA	25	True	ATTAAA	-36	NA	80034465	80046397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80044211_80044286_80045773
transcript_65070.known	chr18	+	5157	4	FSM	ENSG00000101544.9	ENST00000262198.9	5157	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	7.34846922834953	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACTGTTTAATTCTTTT	-12	True	NA	76	True	ATTAAA	-21	NA	80109261	80140346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80109473_80117529_80117651_80133102_80133193_80135611
transcript_65071.known	chr18	+	823	4	FSM	ENSG00000101544.9	ENST00000559951.5	823	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	60.68680984274	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTGCTGGTAGCCCAT	313	False	NA	NA	False	NA	NA	NA	80109725	80135927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80110022_80117529_80117651_80133102_80133193_80135611
transcript_65074.nnic	chr18	-	831	3	NNC	ENSG00000178184.16	novel	3836	3	NA	NA	852	-19701	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGACAAAATACTAAACTGT	1019	False	NA	NA	False	ATTAAA	-30	NA	80246496	80202556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_80202933_80245047_80245403_80246396
transcript_65076.known	chr18	-	596	3	FSM	ENSG00000178184.16	ENST00000470488.2	596	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCTGGGAACATTTGT	167	False	NA	NA	False	AATAAA	-21	NA	80247348	80182849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_80183151_80202709_80202933_80247276
transcript_65077.known	chr18	+	1058	2	FSM	ENSG00000267270.7	ENST00000588226.6	1195	2	137	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTATTGCCCTCTCCCTCC	1	True	NA	22	True	ATTAAA	-31	NA	80148048	80149273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80148255_80148421
transcript_65079.known	chr19	-	398	3	FSM	ENSG00000282458.1	ENST00000632089.1	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	69	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	19	False	NA	NA	False	TATAAA	-16	NA	70945	65821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_66048_66345_66500_70927
transcript_65080.known	chr19	-	387	2	FSM	ENSG00000282458.1	ENST00000632496.1	387	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	4544	False	NA	NA	False	TATAAA	-16	NA	66420	65821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_66134_66345
transcript_65081.known	chr19	-	1183	3	FSM	ENSG00000282591.1	ENST00000631376.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	77686	76162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_76784_76885_77091_77329
transcript_65082.known	chr19	-	1228	6	FSM	ENSG00000141934.10	ENST00000269812.7	1228	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	320.72318282282	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	3	True	NA	-5	True	AGTAAA	-22	NA	291393	281042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291325
transcript_65091.known	chr19	-	1551	3	FSM	ENSG00000129946.11	ENST00000588376.5	1551	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	12.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAAGCCCACCTGCATAT	NA	False	NA	-4	True	ATTAAA	-20	NA	422828	416588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_417323_418922_419057_422145
transcript_65094.known	chr19	+	1147	5	FSM	ENSG00000099804.9	ENST00000586283.6	1147	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	765.47971070434	900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCTGTGCTTGGGAGG	273	False	NA	41	True	AATAAA	-20	NA	532031	542092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_532109_535836_535924_536242_536341_537012_537148_541342
transcript_65095.known	chr19	+	924	5	FSM	ENSG00000197540.8	ENST00000264553.6	924	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCCTGAGTCCCAGCCC	0	True	NA	NA	False	AATAAA	-23	NA	544052	549922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_544127_547279_547437_548541_548678_548921_549186_549629
transcript_65100.known	chr19	+	1946	9	FSM	ENSG00000172270.22	ENST00000333511.9	1946	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3708.19416124615	8953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	-1	True	NA	24	True	AATAAA	-24	NA	572595	583493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_577773_578122_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_65102.known	chr19	+	1795	8	FSM	ENSG00000172270.22	ENST00000545507.6	1795	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	2962.07784213331	9019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	8765	False	NA	24	True	AATAAA	-24	NA	571276	583493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_571580_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_65108.known	chr19	+	1605	7	FSM	ENSG00000172270.22	ENST00000346916.9	1605	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3177.90889055471	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	8	True	NA	24	True	AATAAA	-24	NA	571309	583493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_571580_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_6511.known	chr1	-	2301	10	FSM	ENSG00000116791.14	ENST00000417775.5	2301	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	128.472603603038	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGCTTTTCTAGTTT	NA	False	NA	-27	True	AATAAA	-15	NA	74733408	74705489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74730381_74730421_74732955
transcript_65112.known	chr19	+	1329	6	FSM	ENSG00000172270.22	ENST00000618006.4	1329	6	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	3407.47575780078	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCCTCTCCTGGCTC	22	False	NA	18	True	AATAAA	-18	NA	572618	583487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_65129.known	chr19	-	509	3	FSM	ENSG00000267751.6	ENST00000590292.6	1042	3	40	493	-6	-101	multi-exon	FALSE	canonical	3	77	junction_2	4	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGCTCTCGCTAGA	-5	True	NA	-8	True	NA	NA	NA	571734	567310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_567625_571439_571597_571696
transcript_65130.known	chr19	-	625	3	FSM	ENSG00000267751.6	ENST00000588908.6	1041	3	18	398	-8	-11	multi-exon	FALSE	canonical	3	10	junction_1	33.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGACGTCATGAATTAA	-7	True	NA	-18	True	NA	NA	NA	571736	567220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_567649_571439_571597_571696
transcript_65139.known	chr19	-	469	3	FSM	ENSG00000267751.6	ENST00000588290.3	469	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	40.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTAATTTTCCTTGTC	8466	False	NA	-27	True	AGTAAA	-19	NA	572228	567432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_567625_571439_571597_572108
transcript_65141.known	chr19	-	721	2	FSM	ENSG00000267751.6	ENST00000589457.3	733	2	12	0	8	0	multi-exon	FALSE	canonical	3	85	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTAATTGCGAGAATG	15	True	NA	-7	True	NA	NA	NA	571745	567209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_567625_571439
transcript_65146.known	chr19	+	1630	8	FSM	ENSG00000172270.22	ENST00000680065.1	1630	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3038.15017564898	4425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGATCGCCCCCAC	1003	False	NA	-7	True	NA	NA	NA	572528	583462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582579_582749
transcript_65147.known	chr19	+	2314	7	FSM	ENSG00000172270.22	ENST00000576925.4	2314	7	0	0	0	0	multi-exon	FALSE	canonical	3	8064	junction_6	332.628630090008	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGATCGCCCCCACC	10	True	NA	-6	True	NA	NA	NA	572571	583463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_579499_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_65148.known	chr19	+	960	4	FSM	ENSG00000172270.22	ENST00000614867.2	960	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3974.03673863239	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCCTCTCCTGGCTC	26	False	NA	18	True	AATAAA	-18	NA	572622	583487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_579499_579580_582519_582583_582749
transcript_65149.known	chr19	+	1519	8	FSM	ENSG00000172270.22	ENST00000618112.4	1519	8	0	0	0	0	multi-exon	FALSE	canonical	2	130	junction_3	2975.78090591361	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGATCGCCCCCACC	38	False	NA	-6	True	NA	NA	NA	572634	583463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_579499_579657_580378_580462_580655_580783_581314_581592_582305_582331_582513_582583_582749
transcript_65150.known	chr19	-	3771	21	FSM	ENSG00000099821.14	ENST00000588649.7	3771	21	0	0	0	0	multi-exon	TRUE	canonical	3	732	junction_14	77.7839315025925	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGTCTTCAGGAAGGG	1	True	NA	-29	True	AATAAA	-22	NA	633537	617220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
transcript_65151.known	chr19	-	469	4	FSM	ENSG00000099821.14	ENST00000592633.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	910	junction_1	38.0555150040335	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	NA	False	NA	-32	True	AATAAA	-19	NA	617997	617223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_617324_617418_617481_617569_617656_617776
transcript_65153.known	chr19	+	2144	3	FSM	ENSG00000070404.10	ENST00000592947.5	2144	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	9	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGTCCAGGCCTCAGT	791	False	NA	8	True	AATAAA	-15	NA	680706	683392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_680880_681332_681561_681649
transcript_65156.known	chr19	+	746	3	FSM	ENSG00000070404.10	ENST00000588773.5	746	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	16.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCCTCTAGTCTGGGT	799	False	NA	67	True	NA	NA	NA	680714	682107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_680775_681332_681561_681649
transcript_65159.known	chr19	+	1346	6	FSM	ENSG00000099864.18	ENST00000592870.5	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.59166304662544	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAGGAATGAACTGTGA	110	False	NA	50	True	NA	NA	NA	709096	735048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172
transcript_65161.nnic	chr19	-	685	2	Genic_Genomic	ENSG00000272473.1	novel	861	1	NA	NA	-790	0	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGAGTCCCCTTTTTCT	-6	True	NA	-2	True	AATAAA	-20	NA	782652	781001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_781238_782203
transcript_65164.nnic	chr19	-	1187	3	Antisense	novelGene_ENSG00000267530.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACAAAACCGAGGTGGG	NA	False	NA	NA	False	NA	NA	NA	786106	782218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_783208_783958_784049_785998
transcript_65166.nnic	chr19	+	1043	3	NNC	ENSG00000267530.4	novel	1296	3	NA	NA	0	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACATCTGTATCATCC	-31	True	NA	NA	False	AATAAA	-19	NA	782766	786096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_783331_784814_785117_785919
transcript_65168.known	chr19	+	1023	2	FSM	ENSG00000267530.4	ENST00000606242.3	1045	2	0	22	0	-22	multi-exon	FALSE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACCACTTGTTACCTC	-35	True	NA	NA	False	NA	NA	NA	782762	785269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_783331_784814
transcript_65169.known	chr19	+	864	2	FSM	ENSG00000267530.4	ENST00000665908.1	864	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACATCTGTATC	-20	True	NA	NA	False	AATAAA	-15	NA	782777	786092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_783331_785781
transcript_6517.known	chr1	-	1908	9	FSM	ENSG00000116791.14	ENST00000340866.10	1908	9	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	29.8137447329248	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTTTCTAGTTTTTAT	-19	True	NA	-23	True	AATAAA	-19	NA	74733050	74705485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_65170.known	chr19	+	603	1	FSM	ENSG00000267530.4	ENST00000666859.1	603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCTGCCCAGAAATCCA	-21	True	NA	NA	False	NA	NA	NA	782776	783379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_782800_783400
transcript_65175.known	chr19	+	1036	4	FSM	ENSG00000196415.10	ENST00000544537.2	1036	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.471404520791032	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCCTGTCTGTCCT	18	False	NA	NA	False	AATAAA	-13	NA	843340	848175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_843627_843892_844035_846146_846378_847798
transcript_65176.known	chr19	-	3420	15	FSM	ENSG00000175221.16	ENST00000395808.7	3420	15	0	0	0	0	multi-exon	TRUE	canonical	3	264	junction_5	52.3360413528746	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGTTTCTGTGTCTCT	-7	True	NA	NA	False	NA	NA	NA	893218	867629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
transcript_65179.known	chr19	+	107	1	FSM	ENSG00000207507.1	ENST00000384776.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTCCATTTTCCC	4	False	NA	NA	False	NA	NA	NA	893483	893590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_893500_893600
transcript_6518.known	chr1	+	3335	5	FSM	ENSG00000162623.16	ENST00000457880.6	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	60.0765137137634	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTAGTCTTAGT	-13	True	NA	NA	False	AATAAA	-13	NA	74733151	74766674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74733419_74736541_74736623_74748750_74748823_74752291_74752426_74763893
transcript_65180.known	chr19	-	1803	8	FSM	ENSG00000198858.10	ENST00000361574.10	1803	8	0	0	0	0	multi-exon	TRUE	canonical	3	588	junction_7	46.2839505836813	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-26	True	NA	-7	True	AATAAA	-17	NA	913219	896502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
transcript_65182.known	chr19	-	1704	7	FSM	ENSG00000198858.10	ENST00000589428.5	1704	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	241.957985333542	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	4420	False	NA	-7	True	AATAAA	-17	NA	913245	896502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901975_902131_913086
transcript_65184.known	chr19	+	1498	10	FSM	ENSG00000065268.11	ENST00000591985.6	1498	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	350.964842951049	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTCCTCTCCGGCCTCC	22	False	NA	24	True	NA	NA	NA	984357	994554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991233_991352_991954_992122_994019_994089_994212
transcript_65189.known	chr19	+	1397	9	FSM	ENSG00000065268.11	ENST00000607440.5	1397	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	355.045771697115	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	22	False	NA	27	True	NA	NA	NA	984357	994557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_984564_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994019_994089_994212
transcript_6519.known	chr1	+	3437	6	FSM	ENSG00000162623.16	ENST00000370867.8	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.3385574521497	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTAGTCTTAGTGTC	-13	True	NA	NA	False	AATAAA	-16	NA	74733151	74766677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_65191.known	chr19	+	417	2	FSM	ENSG00000065268.11	ENST00000591155.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	3	1245	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTCCTCTCCGGCCTCC	9584	False	NA	24	True	NA	NA	NA	994013	994554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_994089_994212
transcript_65192.known	chr19	+	1465	9	FSM	ENSG00000065268.11	ENST00000587001.6	1465	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	353.978724643163	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	-4	True	NA	27	True	NA	NA	NA	984331	994557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994212
transcript_65193.known	chr19	+	678	5	FSM	ENSG00000065268.11	ENST00000590354.3	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	481.748378305522	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	6704	False	NA	27	True	NA	NA	NA	991133	994557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_991146_991226_991352_991994_992122_994019_994089_994212
transcript_65196.known	chr19	+	2149	7	FSM	ENSG00000064666.15	ENST00000263097.9	2149	7	0	0	0	0	multi-exon	FALSE	canonical	3	3420	junction_6	186.293451307339	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGCCAAGAGAGTTG	-1	True	NA	30	True	AATAAA	-20	NA	1026607	1039065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1037624
transcript_65197.known	chr19	+	2033	6	FSM	ENSG00000064666.15	ENST00000348419.7	2033	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_4	1412.34791747643	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	1	True	NA	33	True	AATAAA	-23	NA	1026609	1039068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036415_1036563_1037624
transcript_65198.known	chr19	+	2109	7	FSM	ENSG00000064666.15	ENST00000565096.6	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_4	1271.39342848703	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	9	True	NA	33	True	AATAAA	-23	NA	1026617	1039068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032664_1036129_1036247_1036415_1036563_1037624
transcript_65199.known	chr19	+	2194	7	FSM	ENSG00000064666.15	ENST00000562958.6	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	1379.24815469234	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	20	True	NA	33	True	AATAAA	-23	NA	1026628	1039068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036066_1036247_1036415_1036563_1037624
transcript_6520.known	chr1	+	2258	9	FSM	ENSG00000162624.15	ENST00000356261.4	2258	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.43669858620224	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTTTGTCCTTTTTGTGT	-8	True	NA	13	True	ATTAAA	-28	NA	75134387	75161533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75134955_75136602_75136690_75137099_75137262_75140984_75141107_75143117_75143339_75143844_75143949_75148586_75148683_75156892_75157077_75160818
transcript_65200.known	chr19	+	1492	8	FSM	ENSG00000064666.15	ENST00000568865.3	1492	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	1638.84444107451	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTTTTTCCCCCAGGGG	22	True	NA	NA	False	AAGAAA	-3	NA	1026630	1038309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1036878_1037001_1037624
transcript_65201.known	chr19	+	6815	47	FSM	ENSG00000064687.13	ENST00000263094.11	6815	47	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	26.1429471598054	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	-23	True	NA	25	True	AATAAA	-33	NA	1040106	1065572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057914_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
transcript_65206.known	chr19	-	1214	8	FSM	ENSG00000099817.12	ENST00000591767.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1680.88871051681	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGCAGGTGGCCTT	20	True	NA	NA	False	AATAAA	-34	NA	1095336	1088147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093755_1093904_1095258
transcript_65208.known	chr19	-	487	7	FSM	ENSG00000099817.12	ENST00000585838.2	487	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1761.38822302814	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTCACGGCTGCTGCTC	8493	False	NA	NA	False	NA	NA	NA	1095261	1088644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088714_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1095258
transcript_65212.known	chr19	+	940	4	FSM	ENSG00000180448.11	ENST00000586378.5	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	11.8415464455544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGTGTGAGCTGGGGTGG	5388	False	NA	NA	False	NA	NA	NA	1082783	1085996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1083067_1083142_1083354_1084237_1084347_1085659
transcript_65213.known	chr19	-	2854	8	FSM	ENSG00000099817.12	ENST00000615234.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	3537	junction_1	328.412632434955	5787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	-19	True	NA	0	True	AATAAA	-22	NA	1095375	1086573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_65214.known	chr19	-	1286	8	FSM	ENSG00000099817.12	ENST00000215587.11	1286	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1414.70843610395	4943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCGACTAACAAGGTTT	-18	True	NA	NA	False	AATAAA	-19	NA	1095374	1088162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088721_1089471_1089574_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_65215.known	chr19	-	1096	8	FSM	ENSG00000099817.12	ENST00000586746.5	1096	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1416.17923747422	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACGGTGGCTTCCGAGA	2	True	NA	-5	True	AATAAA	-17	NA	1095354	1086578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1086989_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_65216.known	chr19	+	1563	3	FSM	ENSG00000180448.11	ENST00000592297.2	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGAAATAAAAAGTTTT	-5	True	NA	-12	True	NA	NA	NA	1082840	1086600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1083354_1084237_1084347_1085659
transcript_65218.known	chr19	+	1002	8	NNC	ENSG00000167468.19	novel	536	6	NA	NA	-56	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1735.99694347516	1910	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	-10	True	NA	21	True	AATAAA	-21	NA	1104649	1106787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_1104930_1105185_1105281_1105365_1105403_1105405_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_65230.known	chr19	+	812	6	FSM	ENSG00000167468.19	ENST00000589115.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	1615.49665428313	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	14	False	NA	13	True	AATAAA	-13	NA	1104007	1106779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106399_1106460_1106539
transcript_65231.known	chr19	+	803	7	FSM	ENSG00000167468.19	ENST00000588919.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	1470.30971793927	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCGTAGGGGCTTG	9	True	NA	22	True	AATAAA	-22	NA	1104072	1106788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106377_1106460_1106539
transcript_65232.known	chr19	+	1184	5	FSM	ENSG00000167468.19	ENST00000592940.2	1184	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1792.08760946556	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCGTAGGGGCTTGGGG	372	False	NA	25	True	AATAAA	-25	NA	1105155	1106791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1105281_1105365_1105511_1105664_1106267_1106399_1106460_1106539
transcript_65233.known	chr19	+	583	6	FSM	ENSG00000167468.19	ENST00000593032.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	1621.04341706199	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGAGGAGCCCCTGGTAG	3	True	NA	NA	False	NA	NA	NA	1104066	1106443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106180_1106267_1106399
transcript_65234.nnic	chr19	+	517	2	Antisense	novelGene_ENSG00000064932.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCACCTCTGGGCCTGTC	NA	False	NA	NA	False	AATAAA	-37	NA	1173795	1174987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_1173885_1174559
transcript_65236.nnic	chr19	+	275	2	NIC	ENSG00000267778.1	novel	844	3	NA	NA	-65	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCTGTACTAAACGGGG	NA	False	NA	NA	False	AATAAA	-27	NA	1238113	1239525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_1238227_1239363
transcript_65237.known	chr19	+	704	5	FSM	ENSG00000099624.8	ENST00000395633.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_4	336.318301613219	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	-40	True	NA	22	True	ATTAAA	-16	NA	1241745	1244825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244736
transcript_65238.nnic	chr19	+	736	5	NNC	ENSG00000099624.8	novel	1144	4	NA	NA	261	0	at_least_one_novel_splicesite	FALSE	canonical	1	18	junction_1	608.58421767246	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	295	False	NA	22	True	ATTAAA	-16	NA	1242080	1244825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_1242359_1242455_1242610_1244096_1244186_1244314_1244441_1244736
transcript_65239.known	chr19	+	995	4	FSM	ENSG00000099624.8	ENST00000215375.7	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_3	48.2861838992849	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	-35	True	NA	22	True	ATTAAA	-16	NA	1241750	1244825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314
transcript_65240.known	chr19	+	343	3	FSM	ENSG00000099624.8	ENST00000614837.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_2	357	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	2272	False	NA	22	True	ATTAAA	-16	NA	1244057	1244825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1244186_1244314_1244441_1244736
transcript_65241.known	chr19	+	640	2	FSM	ENSG00000099624.8	ENST00000589478.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	2271	False	NA	22	True	ATTAAA	-16	NA	1244056	1244825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1244186_1244314
transcript_65254.known	chr19	+	1303	7	FSM	ENSG00000099622.14	ENST00000586472.5	1303	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	435.605612911496	3530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	5513	False	NA	NA	False	ATTAAA	-18	NA	1266652	1273172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1266702_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_65256.known	chr19	+	1459	7	FSM	ENSG00000099622.14	ENST00000588090.5	1459	7	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	436.332983193137	3512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	383	False	NA	NA	False	ATTAAA	-18	NA	1267087	1273172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1267293_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_65257.known	chr19	+	870	7	FSM	ENSG00000099622.14	ENST00000585630.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	398.235971364829	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGACCGCTTCTGA	2561	False	NA	55	True	NA	NA	NA	1269265	1272582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_65258.known	chr19	+	942	7	FSM	ENSG00000099622.14	ENST00000586773.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	492.492103715605	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCGCCTGGAGCCCG	-6	True	NA	NA	False	NA	NA	NA	1269326	1274595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_6526.nnic	chr1	-	1754	2	NNC	ENSG00000230863.3	novel	1480	3	NA	NA	-36081	0	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCCATTTGTTTAGAAAA	NA	False	NA	NA	False	AATAAA	-33	NA	75678168	75641177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_75642493_75677729
transcript_65262.known	chr19	+	1835	6	FSM	ENSG00000099622.14	ENST00000589710.5	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	435.914945832326	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	2561	False	NA	NA	False	ATTAAA	-18	NA	1269265	1273172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_65267.known	chr19	+	796	2	FSM	ENSG00000099622.14	ENST00000592467.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTGACCCTCCAGGGAC	26	True	NA	NA	False	NA	NA	NA	1261165	1264572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1261642_1264252
transcript_65268.known	chr19	+	769	2	FSM	ENSG00000099622.14	ENST00000589161.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGCAAGATGCAACAT	681	False	NA	NA	False	NA	NA	NA	1261820	1264698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1262144_1264252
transcript_65269.known	chr19	-	1356	2	FSM	ENSG00000267493.4	ENST00000585832.3	1356	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGCCTAGTTATTAAG	5537	False	NA	-3	True	NA	NA	NA	1270260	1267470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1268391_1269824
transcript_65271.known	chr19	+	1328	7	FSM	ENSG00000099622.14	ENST00000320936.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_6	96.3213660386705	8049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	4	True	NA	NA	False	ATTAAA	-18	NA	1269336	1273172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_65272.known	chr19	+	1073	7	FSM	ENSG00000099622.14	ENST00000589235.5	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_6	370.582724308022	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	17	False	NA	18	True	AATAAA	-23	NA	1269349	1274810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_65273.known	chr19	+	1052	9	FSM	ENSG00000099622.14	ENST00000585914.5	1052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	565.450484127479	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGATTCGAATAAAGGGCC	19	False	NA	-19	True	NA	NA	NA	1269351	1274773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1273493_1273716_1274306_1274445_1274648
transcript_65274.known	chr19	+	584	4	FSM	ENSG00000099622.14	ENST00000444172.6	584	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	140.105515792761	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCGAGTCTGTGGTTC	798	False	NA	14	True	AATAAA	-19	NA	1271981	1274806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1272052_1273493_1273716_1274306_1274441_1274648
transcript_65275.known	chr19	+	1087	3	FSM	ENSG00000099622.14	ENST00000588917.2	1087	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	122	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	134	False	NA	18	True	AATAAA	-23	NA	1272924	1274810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1273716_1274306_1274441_1274648
transcript_65276.known	chr19	+	361	3	FSM	ENSG00000099622.14	ENST00000590188.5	361	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	166.5	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	126	False	NA	18	True	AATAAA	-23	NA	1272916	1274810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1273026_1274350_1274441_1274648
transcript_65277.known	chr19	+	716	2	FSM	ENSG00000099622.14	ENST00000586555.2	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	456	False	NA	18	True	AATAAA	-23	NA	1273503	1274810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1273716_1274306
transcript_65280.known	chr19	+	870	3	FSM	ENSG00000228300.14	ENST00000409293.6	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	91.5	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	-17	True	NA	24	True	AATAAA	-19	NA	1275529	1279228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1275831_1277182_1277300_1278776
transcript_65281.known	chr19	+	668	3	FSM	ENSG00000228300.14	ENST00000469144.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	129	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	3	True	NA	40	True	AATAAA	-35	NA	1276020	1279244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1276104_1277182_1277300_1278776
transcript_65282.known	chr19	+	751	3	FSM	ENSG00000228300.14	ENST00000590269.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	191.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGTGCCCAGCAACC	-8	True	NA	NA	False	NA	NA	NA	1276099	1278836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1276674_1277182_1277300_1278776
transcript_65283.nnic	chr19	+	756	3	NNC	ENSG00000228300.14	novel	668	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	186	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	40	False	NA	24	True	AATAAA	-19	NA	1276090	1279228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_1276278_1277182_1277300_1278776
transcript_65289.known	chr19	+	1675	2	FSM	ENSG00000228300.14	ENST00000485191.5	1675	2	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	42	False	NA	40	True	AATAAA	-35	NA	1276092	1279244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1277300_1278776
transcript_6529.known	chr1	+	1451	11	FSM	ENSG00000117054.15	ENST00000526196.5	1451	11	0	0	0	0	multi-exon	TRUE	canonical	3	123	junction_1	164.372777551515	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGTGTTTTCTTTA	-17	True	NA	NA	False	NA	NA	NA	75724705	75762954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_65293.nic	chr19	+	1633	5	NIC	ENSG00000160953.17	novel	1513	4	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_4	139.343101730943	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	-6	True	NA	NA	False	NA	NA	NA	1354977	1359894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1358587
transcript_65296.known	chr19	+	1513	4	FSM	ENSG00000160953.17	ENST00000590866.2	1513	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	142.663551367856	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	-12	True	NA	NA	False	NA	NA	NA	1354971	1359894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1355021_1357008_1357095_1358393_1358465_1358587
transcript_65299.known	chr19	+	522	3	FSM	ENSG00000160953.17	ENST00000592374.6	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	137	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTGTGTTGTTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	1354710	1357094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1355021_1356323_1356450_1357008
transcript_65306.known	chr19	+	745	8	FSM	ENSG00000115286.21	ENST00000534853.5	745	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	489.226503195168	5747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCTCCCAGTGTGGT	2	True	NA	20	True	AATAAA	-13	NA	1383906	1395576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1383938_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_65307.known	chr19	+	869	9	FSM	ENSG00000115286.21	ENST00000546172.7	869	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	595.807802483318	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	13	True	NA	28	True	AATAAA	-21	NA	1383917	1395584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1383943_1386517_1386640_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_65309.known	chr19	-	1110	6	FSM	ENSG00000130005.13	ENST00000252288.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	41.581726755872	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGACTCCCCTCCA	-13	True	NA	50	True	NA	NA	NA	1401542	1397025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_65310.known	chr19	-	1769	5	FSM	ENSG00000130005.13	ENST00000447102.8	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	25.4460212999989	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGGTGTGATTCTTTG	-41	True	NA	-2	True	NA	NA	NA	1401570	1397810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_65313.known	chr19	+	2086	12	FSM	ENSG00000071626.17	ENST00000587079.5	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	253.84761486027	4831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTCCGTTTTT	16	False	NA	30	True	AATAAA	-23	NA	1407679	1435683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
transcript_65320.known	chr19	+	873	3	FSM	ENSG00000115268.10	ENST00000592623.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	17253	junction_2	683.5	14020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	3	True	NA	29	True	AATAAA	-17	NA	1438400	1440494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_65321.known	chr19	+	562	4	FSM	ENSG00000115268.10	ENST00000586686.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7400.50450232205	2439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	-13	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1439967_1440254_1440348
transcript_65322.known	chr19	+	550	4	FSM	ENSG00000115268.10	ENST00000591032.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7397.27739704879	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTTGCGCAGCTT	2	True	NA	25	True	AATAAA	-13	NA	1438399	1440490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1439960_1440254_1440348
transcript_65323.known	chr19	+	711	5	FSM	ENSG00000115268.10	ENST00000591804.6	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	7788.01978602392	2040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	8	True	NA	29	True	AATAAA	-17	NA	1438405	1440494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1439605_1439827_1440018_1440254_1440348
transcript_65324.known	chr19	+	570	3	FSM	ENSG00000115268.10	ENST00000586096.3	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	13469	junction_1	2575.5	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	23	False	NA	29	True	AATAAA	-17	NA	1438420	1440494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1440018
transcript_65325.known	chr19	+	467	4	FSM	ENSG00000115268.10	ENST00000585665.2	467	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	7371.46287305911	2204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	24	False	NA	29	True	AATAAA	-17	NA	1438421	1440494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1440025_1440254_1440348
transcript_65326.known	chr19	+	629	4	FSM	ENSG00000115268.10	ENST00000593052.5	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	965	junction_1	8019.88263976198	15304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	21	False	NA	29	True	AATAAA	-17	NA	1438418	1440494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438581_1438806_1438893_1440018_1440254_1440348
transcript_65327.nnic	chr19	+	1925	3	FSM	ENSG00000268798.1_ENSG00000115268.10	ENST00000592623.5	873	3	405	-1457	384	13	multi-exon	FALSE	canonical	3	17253	junction_2	683.5	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACCATGATTTGCT	408	False	NA	NA	False	NA	NA	NA	1438805	1441951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_65337.known	chr19	-	1410	3	FSM	ENSG00000119559.17	ENST00000427685.2	1410	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	176.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	-19	True	NA	7	True	CATAAA	-33	NA	1479216	1474154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475259_1478653_1478906_1479162
transcript_65338.known	chr19	-	1287	3	FSM	ENSG00000119559.17	ENST00000592872.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	174.5	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCGTCTGAATGGTGC	14	True	NA	-12	True	CATAAA	-14	NA	1479183	1474173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475259_1478773_1478906_1479113
transcript_65339.known	chr19	-	1265	3	FSM	ENSG00000119559.17	ENST00000586564.5	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	187	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGAATGGTGCCTCTGT	16	True	NA	-6	True	CATAAA	-20	NA	1479181	1474167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475259_1478773_1478906_1479139
transcript_65340.known	chr19	-	2243	3	FSM	ENSG00000119559.17	ENST00000585675.6	2243	3	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	35	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACGGTGTCGTCCTTAC	-18	True	NA	-3	True	ATTAAA	-18	NA	1479215	1473200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475259_1478773_1478906_1479162
transcript_65342.known	chr19	-	1524	3	FSM	ENSG00000119559.17	ENST00000651077.1	1524	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	173.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCCGTCTGAATGGT	-18	True	NA	-14	True	CATAAA	-12	NA	1479215	1474175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475515_1478773_1478906_1479162
transcript_65346.known	chr19	-	357	3	FSM	ENSG00000119559.17	ENST00000592605.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	171	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTAGCTGGGCATAGT	-22	True	NA	NA	False	AATGAA	-33	NA	1479219	1478412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1478581_1478773_1478906_1479162
transcript_65355.nic	chr19	-	1972	2	ISM	ENSG00000119559.17	ENST00000591027.2	574	3	-17	1098	-11	-1098	5prime_fragment	FALSE	canonical	3	358	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAAATGAGCCAT	319	False	NA	NA	False	NA	NA	NA	1479230	1477001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_1478906_1479162
transcript_65356.known	chr19	-	492	2	FSM	ENSG00000119559.17	ENST00000589421.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	415	False	NA	NA	False	AATGAA	-11	NA	1479134	1478434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1478906_1479113
transcript_65359.known	chr19	+	552	4	FSM	ENSG00000115266.12	ENST00000587149.6	552	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	7.40870359029762	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGGCGTGGGAACCC	-8	True	NA	NA	False	NA	NA	NA	1452197	1453611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1452319_1452983_1453143_1453246_1453338_1453430
transcript_65360.known	chr19	-	537	2	FSM	ENSG00000115257.15	ENST00000586074.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGCATGGGACCCACC	7770	False	NA	NA	False	NA	NA	NA	1482667	1481985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1482208_1482352
transcript_65361.known	chr19	+	1360	5	FSM	ENSG00000115255.12	ENST00000233596.8	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_4	32.4220218370169	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGCCACGTGTGCGG	-4	True	NA	16	True	AATAAA	-17	NA	1491180	1497927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1491385_1495293_1495388_1495468_1495608_1496284_1496454_1497173
transcript_65363.nnic	chr19	+	478	3	NNC	ENSG00000267092.2	novel	457	2	NA	NA	-417	151	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGGTGGGAGCCTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	1507957	1509114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_1508117_1508663_1508762_1508893
transcript_65373.known	chr19	-	533	4	FSM	ENSG00000127540.12	ENST00000593029.1	533	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	2195.09974463323	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	7	True	NA	-24	True	ATTAAA	-16	NA	1605443	1598048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1598216_1599411_1599561_1602293_1602427_1605359
transcript_65379.known	chr19	-	1299	3	FSM	ENSG00000127540.12	ENST00000591899.8	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	4673	junction_1	32.5	9918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTACAAAGTCACACTC	-12	True	NA	-24	True	AATAAA	-24	NA	1605462	1597168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1598216_1599411_1599561_1605359
transcript_65385.known	chr19	-	1299	1	FSM	ENSG00000261526.2	ENST00000565797.2	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGGCTCATTTTTCT	11	True	NA	1	True	TATAAA	-33	NA	1876169	1874870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1874900_1876200
transcript_65387.known	chr19	+	2501	7	FSM	ENSG00000227500.10	ENST00000316097.13	2501	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	30.4617246174058	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	9	True	NA	33	True	AATAAA	-21	NA	1905398	1926013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_65388.known	chr19	+	2394	6	FSM	ENSG00000227500.10	ENST00000409472.5	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	110.97387079849	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	14	True	NA	33	True	AATAAA	-21	NA	1905403	1926013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1923069_1923188_1924107
transcript_65389.known	chr19	+	1477	6	FSM	ENSG00000227500.10	ENST00000414057.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	107.902548626064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAACCCAGCAAACCGG	-12	True	NA	NA	False	NA	NA	NA	1905377	1925016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1905440_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_65395.known	chr19	+	1599	2	FSM	ENSG00000213638.6	ENST00000329478.4	1599	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTGTCTGTTAGGAGGT	9	True	NA	8	True	AATAAA	-15	NA	1905398	1913447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1905440_1911889
transcript_65396.known	chr19	+	2895	12	FSM	ENSG00000133275.16	ENST00000255641.13	2895	12	0	0	0	0	multi-exon	TRUE	canonical	3	675	junction_2	49.2238939493534	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAGTGTAGAGGGATTTG	12	True	NA	NA	False	AATAAA	-18	NA	1941171	1981338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1941419_1969507_1969960_1978304_1978346_1978441_1978512_1978601_1978751_1978858_1979094_1979162_1979249_1979318_1979404_1979494_1979644_1979751_1979836_1979910_1980018_1980148
transcript_65399.known	chr19	+	468	1	FSM	ENSG00000267283.1	ENST00000588480.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCACGCCCCTTCATTTTC	2351	False	NA	28	True	AATAAA	-16	NA	1989902	1990370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1989900_1990400
transcript_6540.known	chr1	+	1941	10	FSM	ENSG00000117054.15	ENST00000681450.1	1941	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	284.062503989596	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	38	True	NA	-66	True	AAAAAG	-19	NA	75724760	75763596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75734790_75734876_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_65400.known	chr19	-	1744	14	FSM	ENSG00000099875.16	ENST00000309340.11	1744	14	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	245.222227435448	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	20	False	NA	-12	True	AATAAA	-22	NA	2051224	2037464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839_2042035_2042426_2042523_2042606_2042663_2042765_2042871_2043123_2043198_2043502_2043583_2046185_2046284_2046366_2046469_2046603_2046692_2050800_2050948_2051095
transcript_65402.known	chr19	-	875	4	FSM	ENSG00000099875.16	ENST00000591142.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_1	434.505338159255	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	9104	False	NA	-12	True	AATAAA	-22	NA	2042140	2037464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839
transcript_65403.nic	chr19	-	2896	4	ISM	ENSG00000099875.16	ENST00000250896.9	3785	14	9104	0	0	0	3prime_fragment	FALSE	canonical	3	966	junction_1	174.816093843406	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTGAGTTTTAGTT	9104	False	NA	-18	True	AATAAA	-16	NA	2042140	2037470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_2039857_2040133_2040178_2041039_2041205_2041839
transcript_65406.known	chr19	+	975	10	FSM	ENSG00000099840.14	ENST00000395301.8	975	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.16617929972778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTTCTTGTTGGGGCA	17	True	NA	18	True	ATTAAA	-23	NA	2096914	2099590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435_2098451_2098786_2098805_2098975_2099030_2099254
transcript_65408.known	chr19	+	869	8	FSM	ENSG00000099840.14	ENST00000395296.5	869	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.06394436993246	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGAAGAGTTCTTGTT	-2	True	NA	12	True	ATTAAA	-17	NA	2096942	2099584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098128_2098286_2098335_2098435_2098451_2099254
transcript_65410.known	chr19	+	1925	6	FSM	ENSG00000099840.14	ENST00000478879.5	1925	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.89827534923789	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCTTGTTGGGGCAGGG	NA	False	NA	21	True	ATTAAA	-26	NA	2096858	2099593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2097163_2097251_2097333_2097423_2097496_2097928_2097956_2098051_2098335_2098435
transcript_65411.known	chr19	-	3387	5	FSM	ENSG00000172081.14	ENST00000357066.8	3387	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	11.3880419739304	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTGTCGTTTTCCTG	-25	True	NA	-30	True	AATAAA	-23	NA	2096326	2071035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
transcript_65415.known	chr19	+	1619	9	FSM	ENSG00000104897.10	ENST00000221494.10	1619	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	72.6428549480264	7301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGTGCACTGATGTC	-15	True	NA	24	True	ATTAAA	-13	NA	2236823	2248655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766
transcript_65422.nnic	chr19	-	1161	6	NNC	ENSG00000104886.12	novel	1218	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	392	junction_5	552.077675694281	1309	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-15	True	NA	-5	True	AATAAA	-18	NA	2236329	2233152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235934_2236154
transcript_65424.known	chr19	-	1329	6	FSM	ENSG00000104886.12	ENST00000589791.5	1329	6	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_5	687.251453254193	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGGCGGTGAAGTG	3	True	NA	-7	True	AATAAA	-16	NA	2236665	2233154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236377
transcript_65430.known	chr19	+	759	4	FSM	ENSG00000104897.10	ENST00000589118.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	103.866367136924	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGC	-7	True	NA	NA	False	NA	NA	NA	2236831	2245186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732
transcript_65444.known	chr19	-	1218	6	FSM	ENSG00000104886.12	ENST00000326631.7	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_5	95.1012092457294	7581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-15	True	NA	-5	True	AATAAA	-18	NA	2236329	2233152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_65445.known	chr19	-	1311	5	FSM	ENSG00000104886.12	ENST00000587962.6	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_4	98.3221745080935	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCGGTGAAGTGAAGGAG	-12	True	NA	-1	True	AATAAA	-22	NA	2236326	2233148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_65446.known	chr19	-	1092	5	FSM	ENSG00000104886.12	ENST00000591099.6	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	732.086402004572	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	20	True	NA	-5	True	AATAAA	-18	NA	2236294	2233152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2233906_2233997_2234062_2235761_2235829_2235922_2235991_2236154
transcript_65447.known	chr19	+	3691	15	FSM	ENSG00000005206.17	ENST00000613503.5	3691	15	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	50.813635081581	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTTGCTGAGGC	-3	True	NA	NA	False	ATTAAA	-13	NA	2328683	2355095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
transcript_65448.known	chr19	+	2583	15	FSM	ENSG00000005206.17	ENST00000610743.4	2583	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	65.0480199388051	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	6	True	NA	30	True	AATAAA	-19	NA	2328692	2353933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
transcript_65449.known	chr19	+	2459	8	FSM	ENSG00000005206.17	ENST00000618220.4	2459	8	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	33.7088373321554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGGCATTGTGGTGT	9	True	NA	NA	False	AATACA	-7	NA	2328695	2342503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897
transcript_65475.known	chr19	+	1012	4	FSM	ENSG00000104904.12	ENST00000590943.6	1012	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	3437.6473867393	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	NA	False	NA	119	True	AATAAA	-15	NA	2269508	2273488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271781_2271955_2272734_2272821_2272971
transcript_65479.known	chr19	-	621	4	FSM	ENSG00000130332.15	ENST00000585395.6	621	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1942.2609391005	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	3964	False	NA	-15	True	AATAAA	-15	NA	2328477	2321520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2321823_2324124_2324193_2325979_2326140_2328386
transcript_65488.known	chr19	+	969	6	FSM	ENSG00000104904.12	ENST00000582888.8	969	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	3554.80654888561	6312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	9	False	NA	33	True	AATAAA	-20	NA	2269533	2273331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271390_2271443_2271443_2271531_2271781_2271955_2272734_2272821_2272971
transcript_65489.known	chr19	+	726	4	FSM	ENSG00000104904.12	ENST00000592727.3	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	7097	junction_1	209.956080063321	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGTGATACTGAAG	174	False	NA	-29	True	AATAAA	-42	NA	2271361	2273269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2271531_2271781_2271955_2272734_2272821_2272971
transcript_65490.known	chr19	-	512	4	FSM	ENSG00000130332.15	ENST00000585409.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	1440.53323460446	7747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	3830	False	NA	-15	True	AATAAA	-15	NA	2328611	2321520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2321823_2324124_2324193_2328386_2328478_2328560
transcript_65491.known	chr19	+	1131	4	FSM	ENSG00000104904.12	ENST00000581150.6	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	7210	junction_3	202.455482075004	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACGCTCACTCCGAA	0	True	NA	8	True	NA	NA	NA	2269519	2273221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271384_2271955_2272734_2272821_2272971
transcript_65492.known	chr19	+	1357	3	FSM	ENSG00000104904.12	ENST00000593012.1	1357	3	0	0	0	0	multi-exon	FALSE	canonical	3	7588	junction_2	44.5	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGGTTTAA	24	False	NA	27	True	AATAAA	-14	NA	2269548	2273325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271384_2271955_2272734
transcript_65493.known	chr19	-	575	3	FSM	ENSG00000130332.15	ENST00000587502.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	3817	junction_2	174.5	4413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAGCCCCGAATCTT	2	True	NA	-14	True	AATAAA	-16	NA	2328586	2321519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2321823_2324124_2324197_2328386
transcript_65494.known	chr19	-	539	3	FSM	ENSG00000130332.15	ENST00000589532.5	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_2	2058.5	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	7535	False	NA	-15	True	AATAAA	-15	NA	2324906	2321520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2321823_2324124_2324197_2324741
transcript_65495.known	chr19	-	1138	7	FSM	ENSG00000167476.10	ENST00000300961.10	1138	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.60874597374975	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGTCACCTGCTCCTTT	0	True	NA	NA	False	AATAAA	-16	NA	2256417	2252251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2252797_2252911_2253004_2253619_2253794_2254186_2254302_2254444_2254483_2255205_2255345_2256382
transcript_65498.known	chr19	-	631	3	FSM	ENSG00000099800.8	ENST00000591871.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	2028.5	1734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTCTTTATTTCCC	9609	False	NA	-38	True	AATAAA	-16	NA	2427538	2426564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2427047_2427255_2427325_2427458
transcript_65502.known	chr19	-	1664	3	FSM	ENSG00000099800.8	ENST00000215570.8	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	4197	junction_1	86	28326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGCTTGATCCGCTGG	-19	True	NA	-1	True	AATAAA	-38	NA	2427586	2425624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2427047_2427255_2427325_2427413
transcript_65503.known	chr19	-	4634	12	FSM	ENSG00000176619.13	ENST00000325327.4	4634	12	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_8	78.4568102485703	768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	-5	True	NA	-6	True	AATAAA	-14	NA	2456959	2428165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
transcript_65506.known	chr19	+	750	4	FSM	ENSG00000099860.9	ENST00000585359.1	750	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.7320284243028	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGAACCCCCTCCCC	19	False	NA	NA	False	AATACA	-4	NA	2476145	2477657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2476403_2476528_2476629_2477028_2477252_2477487
transcript_65509.known	chr19	-	4193	5	FSM	ENSG00000176533.13	ENST00000382159.8	4193	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	16.3324829710611	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCTGGGCTGTTC	-2	True	NA	-8	True	AATAAA	-20	NA	2702694	2511218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2515148_2520607_2520726_2555148_2555189_2646223_2646281_2702645
transcript_65514.nnic	chr19	-	446	4	NNC	ENSG00000176533.13	novel	4193	5	NA	NA	-19	-23183	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	91.6963588275032	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCAGTTTACCATCCATGG	-1	True	NA	NA	False	AATAAA	-19	NA	2702713	2538175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_2538457_2555148_2555189_2646223_2646281_2702645
transcript_65516.nic	chr19	-	1105	2	ISM	ENSG00000176533.13	ENST00000382159.8	4193	5	-19	134025	-19	-130251	5prime_fragment	FALSE	canonical	3	184	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAAAAG	-1	True	NA	NA	False	NA	NA	NA	2702713	2645243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_2646281_2702645
transcript_65521.nnic	chr19	-	1039	2	NNC	ENSG00000176490.5	novel	546	3	NA	NA	0	-1109	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGAGTTCCCAGGGCCGTT	-11	True	NA	NA	False	AATAAA	-28	NA	2721372	2718507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_2719478_2721303
transcript_65522.known	chr19	-	2940	2	FSM	ENSG00000141873.11	ENST00000455372.2	2940	2	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTCCACACGGGCA	-17	True	NA	-37	True	AATAAA	-18	NA	2740028	2734523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2737380_2739944
transcript_65523.known	chr19	-	1367	3	FSM	ENSG00000141873.11	ENST00000269740.9	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	11	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-6	True	NA	-4	True	TTTAAA	-32	NA	2740017	2732523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2733486_2737047_2737380_2739944
transcript_65526.known	chr19	-	2854	12	FSM	ENSG00000104969.11	ENST00000676943.1	2854	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	223.513306868087	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	128	False	NA	-12	True	AATAAA	-9	NA	2783241	2754722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2782569
transcript_65528.known	chr19	-	2255	12	FSM	ENSG00000104969.11	ENST00000678595.1	2255	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	239.528496898482	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCGTTGTGACCTC	1	True	NA	-24	True	NA	NA	NA	2783327	2754734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2755934_2757336_2757448_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_65532.known	chr19	-	2128	11	FSM	ENSG00000104969.11	ENST00000676984.1	2128	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	240.037684541407	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	-5	True	NA	-12	True	AATAAA	-9	NA	2783285	2754722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2768968_2769092_2783232
transcript_65535.known	chr19	+	4761	13	FSM	ENSG00000172009.15	ENST00000307741.11	4761	13	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_8	57.0600925925175	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGAACCTGTATGTT	-13	True	NA	NA	False	AATAAA	-18	NA	2785502	2815807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
transcript_65542.known	chr19	+	8504	4	FSM	ENSG00000186300.12	ENST00000334241.9	8504	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.71404520791032	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAAAAAAAAGCTTCAC	-2	True	NA	NA	False	ATTAAA	-16	NA	2841474	2860471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852379
transcript_65544.known	chr19	+	2270	4	FSM	ENSG00000186300.12	ENST00000591539.1	2270	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	10.3708994574027	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTGGATATTACGTATC	NA	False	NA	112	True	NA	NA	NA	2841443	2854209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852382
transcript_65549.known	chr19	+	1970	4	FSM	ENSG00000171970.14	ENST00000306908.10	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	8.01387685344754	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTAAGTCCTCTTT	-24	True	NA	NA	False	AATAAA	-17	NA	2900927	2918473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2901049_2915521_2915649_2916077_2916250_2916923
transcript_65552.nnic	chr19	-	577	4	NNC	ENSG00000175691.9	novel	549	2	NA	NA	34	1605	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.06283137026	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAAGACTCCCTTCTGT	9	True	NA	NA	False	NA	NA	NA	2944937	2931612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_2931782_2936523_2936705_2939280_2939408_2944837
transcript_65554.known	chr19	-	2040	4	FSM	ENSG00000175691.9	ENST00000314531.5	2040	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.96655480858378	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTATATTTTGTAATT	-25	True	NA	-3	True	AATAAA	-23	NA	2944971	2933217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2934816_2936523_2936705_2939280_2939408_2944837
transcript_65558.nnic	chr19	-	767	4	NNC	ENSG00000175691.9	novel	549	2	NA	NA	19	-2279	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.5134350376268	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACGAAAAAGAATTAGCCAG	-6	True	NA	NA	False	NA	NA	NA	2944952	2935496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_2935771_2936453_2936705_2939280_2939408_2944837
transcript_65562.known	chr19	+	1977	17	FSM	ENSG00000104953.20	ENST00000246112.9	1977	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.36895638531848	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	-3	True	NA	8	True	AATAAA	-17	NA	2977563	2995179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2977611_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_65563.nic	chr19	+	2012	17	NIC	ENSG00000104953.20	novel	1977	17	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	12	junction_1	9.82960292941683	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	NA	False	NA	8	True	AATAAA	-17	NA	2977537	2995179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_2977620_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_65572.known	chr19	+	1559	8	FSM	ENSG00000104953.20	ENST00000497878.5	1559	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.1832345778131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGTAATAAAGCACCCGG	5255	False	NA	-20	True	NA	NA	NA	2987410	2995151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2987439_2987723_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_65574.known	chr19	+	456	3	FSM	ENSG00000104953.20	ENST00000482627.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	10.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTTGTTGGCATTCA	NA	False	NA	27	True	ATTAAA	-44	NA	2977549	2980407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2977611_2978197_2978285_2980099
transcript_65575.nic	chr19	+	477	3	ISM	ENSG00000104953.20	ENST00000453329.5	582	7	0	6754	0	0	5prime_fragment	FALSE	canonical	3	12	junction_1	12.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTTGTTGGCATTCA	NA	False	NA	27	True	ATTAAA	-44	NA	2977537	2980407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_2977620_2978197_2978285_2980099
transcript_65587.nic	chr19	-	1192	5	ISM	ENSG00000065717.15	ENST00000455444.6	2253	18	22907	5	2652	0	3prime_fragment	FALSE	canonical	3	162	junction_2	34.4492380176979	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	NA	False	NA	-25	True	AATAAA	-15	NA	3006224	2997643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720
transcript_65589.known	chr19	-	1798	7	FSM	ENSG00000104964.15	ENST00000327141.9	1798	7	0	0	0	0	multi-exon	FALSE	canonical	3	2362	junction_2	226.945478033822	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	26	True	NA	-10	True	AATAAA	-16	NA	3062495	3052909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062173
transcript_65591.known	chr19	-	1884	7	FSM	ENSG00000104964.15	ENST00000221561.12	1884	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	990.7935652238	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-1	True	NA	-10	True	AATAAA	-16	NA	3063107	3052909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
transcript_65595.nnic	chr19	-	1480	7	NNC	ENSG00000104964.15	novel	1798	7	NA	NA	294	53	intron_retention	FALSE	non_canonical	0	0	junction_6	1013.02376027855	433	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTTGGTTTTTATTTT	-5	True	NA	-29	True	AATAAA	-16	NA	3061896	3053158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3061643
transcript_65601.known	chr19	+	4190	7	FSM	ENSG00000088256.9	ENST00000078429.9	4190	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	8.13941029804985	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGCCCCCTTCTGG	-12	True	NA	14	True	AATAAA	-14	NA	3094361	3123999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3094788_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
transcript_65602.known	chr19	+	362	2	FSM	ENSG00000266944.1	ENST00000588562.1	362	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGTGGCGCGTTGTCAAT	9127	False	NA	NA	False	NA	NA	NA	3130716	3131398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3130856_3131175
transcript_65603.nic	chr19	+	2227	4	ISM	ENSG00000060558.4	ENST00000262958.4	2273	7	14817	0	1010	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0.942809041582063	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCGCCAGCGTCCTGTTTA	1013	False	NA	5	True	ATTAAA	-17	NA	3150849	3163749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_3151836_3155822_3155953_3157727_3157882_3162792
transcript_65607.nic	chr19	+	754	4	ISM	ENSG00000161082.13	ENST00000334293.10	1591	13	60377	-60	1100	0	3prime_fragment	FALSE	canonical	3	8	junction_1	6.37704215656966	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	3285861	3297076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_3286026_3290271_3290375_3293318_3293487_3296757
transcript_65608.nic	chr19	+	783	4	ISM	ENSG00000161082.13	ENST00000292672.7	1896	13	61213	0	1112	0	3prime_fragment	FALSE	canonical	3	11	junction_1	4.96655480858378	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	3285873	3297076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_3286026_3290230_3290375_3293318_3293487_3296757
transcript_65609.known	chr19	+	1755	10	FSM	ENSG00000141905.19	ENST00000395111.7	1755	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACAGACGCCGGCCGCC	15	True	NA	NA	False	NA	NA	NA	3359646	3463142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3359686_3381711_3382244_3425105_3425178_3433517_3433593_3434276_3434401_3435082_3435208_3449013_3449140_3452481_3452667_3456549_3456636_3462751
transcript_65614.nic	chr19	+	853	5	ISM	ENSG00000141905.19	ENST00000590282.5	1558	10	68389	-71	-74	4	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATAAAAACCCACCCA	-27	True	NA	-18	True	AAGAAA	-25	NA	3434971	3462971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_3435208_3449013_3449140_3452481_3452667_3456549_3456636_3462751
transcript_65615.known	chr19	+	977	4	FSM	ENSG00000141905.19	ENST00000589537.1	977	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACCTCTCCCCGGGCCC	47	False	NA	NA	False	NA	NA	NA	3435045	3463255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3435208_3449013_3449140_3452481_3452667_3462751
transcript_65616.nnic	chr19	-	881	4	NNC	ENSG00000095932.7	novel	1312	4	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.71404520791032	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	4353	False	NA	-19	True	ATTAAA	-21	NA	3479243	3474406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_3474997_3478418_3478479_3478817_3478930_3479124
transcript_65617.known	chr19	-	1312	4	FSM	ENSG00000095932.7	ENST00000215531.6	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	2.35702260395516	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCGCTCTGTCA	-2	True	NA	NA	False	NA	NA	NA	3480525	3473985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3474997_3478418_3478479_3478817_3478930_3480396
transcript_65618.nic	chr19	-	1025	4	NIC	ENSG00000095932.7	novel	1312	4	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	4.24264068711928	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	3004	False	NA	-19	True	ATTAAA	-21	NA	3480592	3474406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_3474997_3478418_3478479_3478817_3478997_3480396
transcript_65619.known	chr19	-	820	3	FSM	ENSG00000095932.7	ENST00000587847.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	4508	False	NA	-120	True	NA	NA	NA	3479088	3474507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3474997_3478418_3478479_3478817
transcript_6562.known	chr1	+	1332	12	FSM	ENSG00000117054.15	ENST00000420607.6	1332	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	188.515952807209	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTCAGCTCCAGAAAAAAGAA	57	False	NA	NA	False	NA	NA	NA	75724779	75762809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75724818_75728388_75728489_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_65620.known	chr19	-	660	2	FSM	ENSG00000095932.7	ENST00000591708.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	2	True	NA	-19	True	ATTAAA	-21	NA	3478488	3474406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3474997_3478418
transcript_65627.known	chr19	-	714	2	FSM	ENSG00000161091.14	ENST00000589157.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGGAACGAGACTCAGC	7798	False	NA	NA	False	NA	NA	NA	3543382	3538649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3538757_3542775
transcript_65628.known	chr19	-	2176	11	FSM	ENSG00000011132.12	ENST00000316757.4	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	27.3278246481494	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGGTTGTGGGTTCTGT	-2	True	NA	91	True	ATTAAA	-16	NA	3761692	3750771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759560_3759601_3759688_3760302_3761535
transcript_6563.known	chr1	+	1448	9	FSM	ENSG00000137955.16	ENST00000319942.8	1448	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	136.902280386413	2881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	-3	True	NA	27	True	AATAAA	-24	NA	75786255	75795086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_65631.nnic	chr19	-	1328	3	NNC	ENSG00000011132.12	novel	725	2	NA	NA	0	1711	intron_retention	FALSE	canonical	0	0	junction_1	77	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGCTTGGTTATTCAT	-2	True	NA	-7	True	AATAAA	-15	NA	3761692	3757900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_3757981_3759210_3760302_3761535
transcript_65633.known	chr19	+	608	3	FSM	ENSG00000183617.5	ENST00000330133.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_2	5.5	4649	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTTGGTATTGTCTG	12	True	NA	28	True	AATAAA	-22	NA	3762681	3767565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3762819_3765165_3765332_3767260
transcript_65634.known	chr19	-	2098	14	FSM	ENSG00000007264.15	ENST00000310132.11	2098	14	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_12	24.4414528083871	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTAGGCGCCTGTGTGTCTC	8	True	NA	-6	True	GATAAA	-17	NA	3786381	3777972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3778423_3778508_3778596_3778991_3779188_3779377_3779452_3779532_3779618_3779697_3779798_3781606_3781673_3783125_3783220_3783813_3784034_3784123_3784240_3784337_3784452_3784824_3784885_3785063_3785287_3786168
transcript_65637.known	chr19	-	1019	3	FSM	ENSG00000105278.12	ENST00000586578.1	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	37.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	13	True	NA	-1	True	AATAAA	-25	NA	3869015	3851804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3852615_3855401_3855560_3868964
transcript_65638.nnic	chr19	-	1046	3	NNC	ENSG00000105278.12	novel	1019	3	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	64.5	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	NA	False	NA	-1	True	AATAAA	-25	NA	3869212	3851804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_3852615_3855401_3855560_3869134
transcript_65639.nic	chr19	-	1200	3	NIC	ENSG00000105278.12	novel	1019	3	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_2	27	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	NA	False	NA	-1	True	AATAAA	-25	NA	3869059	3851804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_3852615_3855401_3855697_3868964
transcript_6564.known	chr1	+	3863	7	FSM	ENSG00000137955.16	ENST00000496055.5	3863	7	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_2	190.646633562958	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGTCCTGTTATTC	NA	False	NA	42	True	AATAAA	-27	NA	75786196	75794833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75786275_75787496_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_65640.known	chr19	-	870	2	FSM	ENSG00000105278.12	ENST00000439086.2	870	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAAATGTGAATTTCAT	-4	True	NA	-9	True	AATAAA	-17	NA	3869032	3851812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3852615_3868964
transcript_65641.known	chr19	+	4971	13	FSM	ENSG00000167654.18	ENST00000450849.7	4971	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	8.50939023797958	612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTTGTTCCTTTTGA	14	True	NA	18	True	AATAAA	-18	NA	3880684	3928082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
transcript_65647.known	chr19	+	1139	8	FSM	ENSG00000077009.14	ENST00000616156.4	1139	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	393.570417421569	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	6	True	NA	10	True	AGTAAA	-18	NA	3933102	3942414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3933179_3933457_3933698_3936574_3936666_3937224_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
transcript_6565.known	chr1	+	2137	10	FSM	ENSG00000137955.16	ENST00000471759.5	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	191.599376271569	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	12	False	NA	12	True	AATAAA	-26	NA	75786700	75794803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_65657.known	chr19	+	691	5	FSM	ENSG00000077009.14	ENST00000599576.5	691	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	510.247733948912	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTGGTGTCTACCGT	19	False	NA	9	True	AGTAAA	-17	NA	3933115	3942413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3933179_3936574_3936666_3937239_3937289_3938602_3938760_3942082
transcript_6566.known	chr1	+	1177	2	FSM	ENSG00000137955.16	ENST00000459697.1	1177	2	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	0	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCTGTTATTCT	1977	False	NA	43	True	AATAAA	-28	NA	75793381	75794834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75794234_75794509
transcript_65662.nic	chr19	-	768	2	ISM	ENSG00000167657.14	ENST00000596311.5	671	4	26	4816	2	-4507	5prime_fragment	FALSE	canonical	3	233	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGTGTTAATCCTCT	-6	True	NA	NA	False	TTTAAA	-11	NA	3971097	3969137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_3969830_3971021
transcript_65664.nic	chr19	-	600	2	ISM	ENSG00000167657.14	ENST00000596311.5	671	4	26	4984	2	-4675	5prime_fragment	FALSE	canonical	3	233	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACCAGGTGTGGTAGCTC	-6	True	NA	NA	False	AATAAA	-13	NA	3971097	3969305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_3969830_3971021
transcript_65665.known	chr19	-	671	4	FSM	ENSG00000167657.14	ENST00000596311.5	671	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	17.4547032821147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCGACTTCGGCATCGCG	-32	True	NA	NA	False	AAAACA	-43	NA	3971123	3964321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3964374_3964630_3964992_3969673_3969830_3971021
transcript_65667.known	chr19	-	3158	15	FSM	ENSG00000167658.16	ENST00000309311.7	3158	15	0	0	0	0	multi-exon	FALSE	canonical	3	6813	junction_14	678.896001322916	47399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGCATTTTTCAC	-1	True	NA	-14	True	AATAAA	-17	NA	3985463	3976055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
transcript_65669.known	chr19	+	3069	11	FSM	ENSG00000105229.7	ENST00000262971.3	3069	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	10.5304320899002	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCGTCCGCTTTTCTG	-3	True	NA	30	True	AATAAA	-20	NA	4007735	4039386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4007788_4012922_4013350_4024035_4024121_4028145_4028188_4028509_4028601_4028719_4028849_4028930_4029037_4033099_4033174_4033419_4033581_4037373_4037505_4037615
transcript_6567.nnic	chr1	+	547	3	NNC	ENSG00000184005.11	novel	6836	5	NA	NA	-54	-259401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTACTCCTTACTCCC	NA	False	NA	8	True	AATAAA	-23	NA	76074691	76153602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_76074885_76152263_76152393_76153377
transcript_65670.known	chr19	-	1727	11	FSM	ENSG00000126934.15	ENST00000262948.10	1727	11	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_9	95.4792647646598	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCGCCATCCTGCTTCTTT	-16	True	NA	-8	True	AAAAAG	-5	NA	4124122	4090320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4090709_4094452_4094499_4095387_4095450_4097278_4097344_4099200_4099415_4101018_4101144_4101228_4101281_4102375_4102454_4110508_4110656_4117418_4117630_4123783
transcript_65676.known	chr19	-	1507	8	FSM	ENSG00000077463.15	ENST00000594279.5	1507	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	29.5185863275244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCAATGCAATAAAAACAAT	279	False	NA	-36	True	GGGGCT	-39	NA	4182279	4174140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182210
transcript_65677.nic	chr19	-	1616	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	22.4862769942297	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	NA	False	NA	-4	True	AATAAA	-19	NA	4182619	4174108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_65679.known	chr19	-	1600	8	FSM	ENSG00000077463.15	ENST00000337491.7	1600	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.4310342387469	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-5	True	NA	-4	True	AATAAA	-19	NA	4182563	4174108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_6568.nnic	chr1	+	519	3	NNC	ENSG00000184005.11	novel	6836	5	NA	NA	-9	-259401	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTACTCCTTACTCCC	6	True	NA	8	True	AATAAA	-23	NA	76074736	76153602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_76074885_76152246_76152393_76153377
transcript_65683.known	chr19	-	1361	7	FSM	ENSG00000077463.15	ENST00000601488.5	1361	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	29.9091216112335	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	11	True	NA	-4	True	AATAAA	-19	NA	4182547	4174108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_65685.known	chr19	-	1473	7	FSM	ENSG00000077463.15	ENST00000600938.5	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	24.6537128148187	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGTGTGTTTACTTTA	-7	True	NA	-5	True	AATAAA	-18	NA	4182565	4174109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_65686.known	chr19	-	827	7	FSM	ENSG00000077463.15	ENST00000597896.5	827	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	24.6080384337223	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCGGTCCCCAGCTGAC	58	False	NA	NA	False	NA	NA	NA	4182500	4174635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_65687.known	chr19	-	1506	7	FSM	ENSG00000077463.15	ENST00000305232.10	1506	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	28.1508831517276	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	8	True	NA	-4	True	AATAAA	-19	NA	4182550	4174108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_6569.nnic	chr1	+	533	3	NNC	ENSG00000184005.11	novel	6836	5	NA	NA	-4	-259401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTACTCCTTACTCCC	11	True	NA	8	True	AATAAA	-23	NA	76074741	76153602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_76074885_76152227_76152393_76153377
transcript_65692.known	chr19	-	1372	6	FSM	ENSG00000077463.15	ENST00000599365.5	1372	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34.284690460904	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	14	True	NA	-4	True	AATAAA	-19	NA	4182544	4174108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_65695.known	chr19	-	371	2	FSM	ENSG00000077463.15	ENST00000594341.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAATTCCAGACCAGC	12	True	NA	NA	False	NA	NA	NA	4182546	4180611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4180910_4182473
transcript_65698.known	chr19	+	1158	5	FSM	ENSG00000105246.6	ENST00000221847.6	1158	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.22474487139159	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGATGTTGC	1	True	NA	5	True	AATAAA	-1	NA	4229522	4237528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4229618_4231190_4231324_4233128_4233308_4234666_4234825_4236935
transcript_65699.known	chr19	+	1431	8	FSM	ENSG00000105248.16	ENST00000262962.12	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	24.9423825842599	692	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	-18	True	NA	23	True	AATAAA	-15	NA	4247079	4269088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4247171_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
transcript_65702.known	chr19	-	1020	1	FSM	ENSG00000280247.1	ENST00000622962.1	1020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGCCCCAAGGGCTGG	NA	False	NA	NA	False	AATAAA	-21	NA	4247358	4246338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4246300_4247400
transcript_65703.nnic	chr19	+	1206	7	NNC	ENSG00000105251.11	novel	1910	6	NA	NA	-267	0	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	16.918103387266	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	439	False	NA	17	True	AATAAA	-13	NA	4278998	4290722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_4279085_4280055_4280361_4282869_4282976_4283053_4283243_4284780_4284905_4288242_4288363_4290446
transcript_65704.nic	chr19	+	1168	3	ISM	ENSG00000105251.11	ENST00000593383.1	558	4	1050	-69	-298	0	3prime_fragment	FALSE	canonical	3	46	junction_2	5	103	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	4293	False	NA	17	True	AATAAA	-13	NA	4284132	4290722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_4284905_4288242_4288363_4290446
transcript_65705.known	chr19	-	1262	5	FSM	ENSG00000167664.8	ENST00000301272.6	1262	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.38484800354236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCTGGTGTTTGTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	4302431	4292231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4292886_4294566_4294681_4294774_4294817_4297985_4298346_4302339
transcript_65706.known	chr19	-	1212	5	FSM	ENSG00000167664.8	ENST00000595645.5	1212	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	1.92028643696715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCTGGTGTTTGTGGC	0	True	NA	NA	False	AATAAA	-17	NA	4302393	4292231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4292886_4294578_4294681_4294774_4294817_4297985_4298346_4302339
transcript_65710.known	chr19	+	1634	13	FSM	ENSG00000105255.11	ENST00000597590.5	1634	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	122.976595560113	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTCTTAATAAAGGTC	16	True	NA	-15	True	NA	NA	NA	4304675	4323806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323147_4323347_4323437_4323532
transcript_65711.known	chr19	+	1833	13	FSM	ENSG00000105255.11	ENST00000221856.11	1833	13	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_8	30.1602203057088	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	-12	True	NA	15	True	AATAAA	-15	NA	4304597	4323836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_65724.known	chr19	-	1376	13	FSM	ENSG00000178078.12	ENST00000594605.6	1376	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.1767938802135	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-16	True	NA	-3	True	ATTAAA	-16	NA	4338827	4324042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_65725.known	chr19	-	1508	13	FSM	ENSG00000178078.12	ENST00000600324.5	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.4550901292398	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-10	True	NA	-3	True	ATTAAA	-16	NA	4338821	4324042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4324198_4324454_4324668_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_65726.nic	chr19	-	1257	12	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	37.3553408176569	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	13	True	NA	-3	True	ATTAAA	-16	NA	4338843	4324042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_65733.nic	chr19	-	1393	12	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	36.5739373401605	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	3785	False	NA	-3	True	ATTAAA	-16	NA	4338919	4324042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4324198_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_65737.nic	chr19	-	1216	11	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	42.6672005174935	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	3827	False	NA	-3	True	ATTAAA	-16	NA	4338877	4324042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4324198_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_65757.known	chr19	+	1614	13	FSM	ENSG00000008382.16	ENST00000599840.6	1614	13	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	28.6078611962206	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCACGCTGGTCTCCC	-2	True	NA	6	True	AATAAA	-16	NA	4343561	4360078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_65758.known	chr19	+	1445	12	FSM	ENSG00000008382.16	ENST00000597036.5	1445	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	42.1151510790739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCGGATGGGCTCAGGTA	11	False	NA	-34	True	NA	NA	NA	4343710	4360038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357339_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_65759.known	chr19	+	1578	11	FSM	ENSG00000008382.16	ENST00000596722.5	1578	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	41.8890200410561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAGCAGCCAGCCACG	10	False	NA	-4	True	AATAAA	-6	NA	4343604	4360068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4359162_4359256_4359915
transcript_6576.known	chr1	-	4601	11	FSM	ENSG00000142892.15	ENST00000370812.8	4601	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_7	35.0279888089511	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAGGTGGCAGTGTC	-12	True	NA	-9	True	ATTAAA	-18	NA	77219430	77088988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
transcript_65763.known	chr19	+	379	3	FSM	ENSG00000008382.16	ENST00000601877.1	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	3.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGTGGCCAGGCCCAGT	9290	False	NA	6	True	AATAAA	-13	NA	4352989	4354577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4353030_4354044_4354130_4354323
transcript_65764.known	chr19	-	2516	10	FSM	ENSG00000141985.9	ENST00000269886.7	2516	10	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_6	56.2869631639709	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGCCTCGTCTTGGT	-43	True	NA	-8	True	ATTAAA	-15	NA	4400547	4360369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4400323
transcript_65767.known	chr19	-	1915	11	FSM	ENSG00000167671.12	ENST00000301281.11	1915	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	7.9724525711979	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGGTTCTCCGTTGA	-4	True	NA	NA	False	AATAAA	-18	NA	4457794	4445005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4445624_4446048_4446198_4446282_4446414_4446499_4446720_4446835_4446921_4447549_4447626_4448317_4448416_4452363_4452493_4453457_4453523_4453929_4454094_4457614
transcript_65770.known	chr19	+	3366	15	FSM	ENSG00000167670.16	ENST00000301280.10	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_3	70.356417690244	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	1	True	NA	24	True	TATAAA	-19	NA	4402639	4443397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
transcript_65773.known	chr19	+	2267	16	FSM	ENSG00000167674.15	ENST00000616600.5	2267	16	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_6	50.6234025811076	505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATCACTTTTATTGGCTT	26	True	NA	3	True	TATAAA	-20	NA	4472296	4502207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4472423_4475274_4475352_4475444_4475584_4488675_4488877_4491565_4491683_4491763_4491836_4493702_4493863_4493981_4494058_4494165_4494476_4496301_4496406_4497957_4498032_4498305_4498377_4498813_4498916_4499490_4499705_4501190_4501318_4501910
transcript_65776.known	chr19	-	907	2	FSM	ENSG00000214456.8	ENST00000586133.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGGGTGCCTGTATTCCC	-1	True	NA	NA	False	AATACA	-19	NA	4535224	4533248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4534096_4535164
transcript_65777.known	chr19	-	2605	2	FSM	ENSG00000171236.10	ENST00000306390.7	2605	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTACATCTGTGGTC	1	True	NA	NA	False	AATAAA	-17	NA	4540036	4536401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4538952_4539981
transcript_65778.nnic	chr19	+	792	3	Antisense	novelGene_ENSG00000167680.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTTACCCTGTTTTG	4859	False	NA	4	True	AATAAA	-18	NA	4580525	4586064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_4580773_4585411_4585583_4585690
transcript_65781.nnic	chr19	-	970	6	NNC	ENSG00000074842.8	novel	990	6	NA	NA	122	0	at_least_one_novel_splicesite	TRUE	canonical	1	19	junction_5	355.949659362107	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	131	False	NA	-47	True	AATAAA	-20	NA	4670220	4657544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670058
transcript_65783.known	chr19	-	990	6	FSM	ENSG00000074842.8	ENST00000262947.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_5	114.448940580505	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	9	True	NA	-47	True	AATAAA	-20	NA	4670342	4657544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
transcript_65786.known	chr19	+	2946	1	FSM	ENSG00000185361.9	ENST00000598107.1	2946	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAATTAA	4	True	NA	NA	False	NA	NA	NA	4639536	4642482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4639500_4642500
transcript_65787.known	chr19	-	2025	13	FSM	ENSG00000142002.18	ENST00000597849.5	2025	13	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_3	12.0715459748212	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGACTGTCTGTGGTCGC	50	True	NA	-5	True	AATAAA	-35	NA	4723750	4694316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_65788.known	chr19	-	1909	12	FSM	ENSG00000142002.18	ENST00000601764.5	1909	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	36.2527855869024	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGACTGTCTGTGGTCG	-13	True	NA	-6	True	AATAAA	-34	NA	4723813	4694317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4694824_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_65789.known	chr19	+	630	4	FSM	ENSG00000176840.13	ENST00000655494.2	631	4	1	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGATCCTTCTTCTAG	-1	True	NA	NA	False	AATAAA	-44	NA	4769132	4772560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4769170_4769283_4769352_4769629_4769758_4772163
transcript_65790.known	chr19	+	843	6	FSM	ENSG00000176840.13	ENST00000670508.1	843	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATGGCCTCAGCAC	-1	True	NA	NA	False	AATAAA	-37	NA	4769132	4772537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4769170_4769283_4769352_4769629_4769758_4770087_4770222_4770347_4770450_4772163
transcript_65791.known	chr19	-	418	2	FSM	ENSG00000268536.2	ENST00000598782.2	627	2	111	98	111	-98	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGGGATAAATAGAGAA	82	False	NA	NA	False	AATAAA	-13	NA	4791207	4785119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4785528_4791197
transcript_65792.known	chr19	+	511	2	FSM	ENSG00000267484.1	ENST00000591657.1	511	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTGCAGGGGAGAAC	6287	False	NA	NA	False	NA	NA	NA	4838331	4838907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4838411_4838475
transcript_65793.known	chr19	+	2651	17	FSM	ENSG00000276043.5	ENST00000615884.4	2651	17	0	0	0	0	multi-exon	TRUE	canonical	3	190	junction_1	70.8929375449346	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATACATTTTCAGGA	-2	True	NA	NA	False	AAAAAG	-36	NA	4910145	4960961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4910247_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_65796.nnic	chr19	-	830	2	NNC	ENSG00000105426.18	novel	5443	31	NA	NA	54393	-39	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGGTCCAAGACACC	NA	False	NA	NA	False	AATAAA	-13	NA	5165623	5158533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_5159105_5165364
transcript_65797.known	chr19	-	5443	31	FSM	ENSG00000105426.18	ENST00000588552.5	5443	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	69.1700320466409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGAAGGTCCGCGGCTT	-20	True	NA	NA	False	NA	NA	NA	5340803	5158494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5159105_5173968_5174083_5207921_5208058_5208236_5208392_5210468_5210595_5210678_5210806_5211589_5211769_5211964_5212251_5212336_5212492_5214360_5214481_5214560_5214737_5215288_5215413_5215497_5215596_5216719_5216768_5218419_5218533_5218786_5218799_5219309_5219468_5219938_5220155_5220259_5220354_5220999_5221254_5222122_5222221_5238918_5239064_5240198_5240333_5243900_5244483_5245775_5246046_5258016_5258128_5265007_5265197_5273441_5273584_5274198_5274345_5286049_5286235_5340663
transcript_65798.nnic	chr19	+	773	2	Genic_Genomic	ENSG00000274447.1	novel	450	1	NA	NA	-838	-14	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCTTCCCTTACCATGC	2856	False	NA	NA	False	AATAAA	-29	NA	5293408	5294682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_+_5293646_5294146
transcript_65799.known	chr19	-	279	1	FSM	ENSG00000233270.1	ENST00000435815.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATCAATGAAGTGAGA	8	True	NA	NA	False	NA	NA	NA	5576938	5576659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5576700_5576900
transcript_65800.known	chr19	+	3064	21	FSM	ENSG00000160633.13	ENST00000588852.2	3064	21	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_14	192.703522282287	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	-27	True	NA	56	True	AATAAA	-26	NA	5623082	5668478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_65801.known	chr19	+	3042	21	FSM	ENSG00000160633.13	ENST00000292123.9	3042	21	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_18	245.553537950484	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	-11	True	NA	56	True	AATAAA	-26	NA	5623098	5668478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
transcript_65802.known	chr19	+	3014	21	FSM	ENSG00000160633.13	ENST00000592224.5	3014	21	0	0	0	0	multi-exon	FALSE	canonical	3	865	junction_14	147.194802897385	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	8	True	NA	44	True	AATAAA	-14	NA	5623117	5668466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_65803.nic	chr19	+	3091	21	NIC	ENSG00000160633.13	novel	3042	21	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	376	junction_18	213.871801554109	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATTTAAAGTGTCAT	NA	False	NA	49	True	AATAAA	-19	NA	5623039	5668471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
transcript_6581.known	chr1	-	4318	8	FSM	ENSG00000142892.15	ENST00000445065.5	4318	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.8437580784267	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGAAAGGTGGCAGTGT	-12	True	NA	-10	True	ATTAAA	-17	NA	77219430	77088989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77219309
transcript_65810.nic	chr19	-	1916	12	ISM	ENSG00000130254.12	ENST00000252542.9	3167	21	-249	13215	-249	0	5prime_fragment	FALSE	canonical	3	171	junction_5	37.5941792575604	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTGAAGACATTAAGAAG	3454	False	NA	13	True	NA	NA	NA	5623025	5600213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_65819.nic	chr19	+	802	6	ISM	ENSG00000160633.13	ENST00000586934.5	995	9	-81	5200	5	-145	5prime_fragment	FALSE	canonical	3	953	junction_5	128.030621337241	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACTGTTAAATGAAAAAC	NA	False	NA	NA	False	NA	NA	NA	5623039	5648042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015
transcript_65822.known	chr19	-	3167	21	FSM	ENSG00000130254.12	ENST00000252542.9	3167	21	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_14	38.4765837880652	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGTGCGCGTGCACA	9	True	NA	-19	True	AATAAA	-15	NA	5622776	5586998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5587400_5587700_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_65823.known	chr19	-	836	9	FSM	ENSG00000130254.12	ENST00000591123.5	836	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	79.1556022969947	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATTAGCGTGAAAACCAC	6507	False	NA	NA	False	GATAAA	-16	NA	5616278	5598831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5612539_5612568_5613464_5613528_5616131
transcript_65829.known	chr19	+	874	6	FSM	ENSG00000130255.13	ENST00000577222.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6114.11172289156	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCTCCCTGAAATAAAGA	21	False	NA	3	True	AAGAAA	-19	NA	5681181	5691633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5681272_5684964_5685120_5690030_5690328_5690505_5690601_5691318_5691454_5691531
transcript_65845.known	chr19	+	730	4	FSM	ENSG00000167733.14	ENST00000422535.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	23.4236347876812	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	17	True	NA	NA	False	AATAAA	-23	NA	5681047	5685589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5685301
transcript_6585.nnic	chr1	-	728	4	NNC	ENSG00000142892.15	novel	4601	11	NA	NA	0	-26012	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	128.87461606797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCTCATATTTTGGG	-12	True	NA	NA	False	AATAAA	-18	NA	77219430	77180505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_77180967_77206639_77206732_77210435_77210490_77219309
transcript_65857.known	chr19	+	399	3	FSM	ENSG00000167733.14	ENST00000577701.1	399	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	31	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGGAGGCCGAGGAAA	24	True	NA	NA	False	AATAAA	-44	NA	5681054	5685328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5681272_5684964_5685120_5685301
transcript_65863.known	chr19	-	516	4	FSM	ENSG00000174917.9	ENST00000309324.9	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_3	28.9865869364129	5959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5	True	NA	-7	True	AATAAA	-15	NA	5680516	5678421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680457
transcript_65864.known	chr19	-	655	4	FSM	ENSG00000174917.9	ENST00000587950.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	233.807613220785	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-9	True	NA	-7	True	AATAAA	-15	NA	5680252	5678421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680054
transcript_65865.known	chr19	-	577	4	FSM	ENSG00000174917.9	ENST00000587589.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	228.824532484318	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCCTGGTAT	422	False	NA	NA	False	AATAAA	-2	NA	5680488	5678914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5679231_5679344_5679397_5679585_5679764_5680457
transcript_65866.known	chr19	-	773	2	FSM	ENSG00000174917.9	ENST00000590075.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGCTTGAGAGGCTGA	1	True	NA	NA	False	AATACA	-40	NA	5680510	5679043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5679764_5680457
transcript_65867.known	chr19	+	607	4	FSM	ENSG00000130255.13	ENST00000347512.8	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	2798.47784022354	58244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGATTAAGCCGACTGAG	-1	True	NA	21	True	ATTAAA	-17	NA	5690294	5691875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5690328_5690505_5690601_5691318_5691454_5691531
transcript_65868.known	chr19	+	556	3	FSM	ENSG00000130255.13	ENST00000394580.2	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	12706	junction_2	881	15384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCTCTCCTGCTGTC	-2	True	NA	37	True	AATAAA	-17	NA	5690315	5691667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5690601_5691318_5691454_5691531
transcript_65869.known	chr19	+	452	3	FSM	ENSG00000130255.13	ENST00000579446.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	7850	junction_1	3309	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	10	False	NA	23	True	AATAAA	-3	NA	5690305	5691653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5690328_5690505_5690601_5691318
transcript_65870.known	chr19	-	586	4	FSM	ENSG00000174917.9	ENST00000585605.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	251.025895078576	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGACCCGTGTGCTGGC	1147	False	NA	-6	True	AATAAA	-16	NA	5679763	5678420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5678649_5678774_5678903_5679344_5679397_5679585
transcript_65873.known	chr19	-	566	2	FSM	ENSG00000141994.16	ENST00000589854.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTCTGATGCCATTCCG	7	True	NA	NA	False	NA	NA	NA	5791210	5789936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5790336_5791043
transcript_65884.known	chr19	-	657	5	FSM	ENSG00000174886.14	ENST00000593233.1	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	1264.17621398284	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGTGTCCGGAGGGC	9	True	NA	-12	True	AATAAA	-16	NA	5903754	5894676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5901334_5901455_5903611
transcript_65895.known	chr19	-	604	2	FSM	ENSG00000174886.14	ENST00000591160.1	604	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGATGGTGC	-3	True	NA	NA	False	AGTAAA	-5	NA	5904006	5902430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5902640_5903611
transcript_65896.known	chr19	-	575	4	FSM	ENSG00000174886.14	ENST00000308961.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	2498	junction_1	205.647486950094	18954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-27	True	NA	-10	True	AATAAA	-18	NA	5903790	5894674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5903611
transcript_65897.known	chr19	-	2154	3	FSM	ENSG00000174886.14	ENST00000592634.5	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	2801	junction_1	98.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-8	True	NA	-10	True	AATAAA	-18	NA	5903771	5894674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5896576_5896904_5896998_5903611
transcript_65898.known	chr19	-	3233	17	FSM	ENSG00000031823.14	ENST00000340578.10	3233	17	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_15	180.11138047053	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCCTCTGCATGCCCC	0	True	NA	NA	False	ATTAAA	-14	NA	5978140	5916138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5951392_5951597_5957917_5957974_5978060
transcript_65900.known	chr19	-	1762	16	FSM	ENSG00000031823.14	ENST00000034275.12	1762	16	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_9	89.1865460705817	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACATTAAGACTTGTC	12	True	NA	-37	True	NA	NA	NA	5978086	5917351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_65901.known	chr19	-	1783	16	FSM	ENSG00000031823.14	ENST00000591092.5	1783	16	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_9	97.6100177008259	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGACTGGAGACCTCG	5	True	NA	-8	True	NA	NA	NA	5978093	5917322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_6591.known	chr1	-	1926	9	FSM	ENSG00000142892.15	ENST00000359130.1	1926	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	38.1114730101055	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACCTCAGACATTTGTC	-11	True	NA	NA	False	ATTAAA	-20	NA	77219429	77153535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
transcript_65910.known	chr19	-	535	8	FSM	ENSG00000031823.14	ENST00000588879.5	535	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	205.631729466212	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAATGCCTCTGAAGAGG	0	True	NA	NA	False	NA	NA	NA	5978140	5928061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957936_5978060
transcript_65914.known	chr19	-	310	2	FSM	ENSG00000087903.13	ENST00000590822.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTATGTGGCCTTTTG	33	True	NA	-7	True	TATAAA	-8	NA	6110468	6078100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6078335_6110392
transcript_65915.known	chr19	-	557	2	FSM	ENSG00000087903.13	ENST00000589641.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAGAGAGAGAAGACAG	NA	False	NA	NA	False	TATAAA	-44	NA	6199572	6191569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6192030_6199475
transcript_65916.known	chr19	-	2376	2	FSM	ENSG00000087903.13	ENST00000587700.1	2376	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAGAAA	-7	True	NA	NA	False	AGTAAA	-11	NA	6199529	6189727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6192054_6199479
transcript_65917.nnic	chr19	+	569	2	FSM	ENSG00000266983.2	ENST00000692109.1	388	2	-183	2	-183	-2	multi-exon	FALSE	canonical	3	39	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAGCGTCTGCTGATT	942	False	NA	11	True	AATAAA	-16	NA	5978171	5980727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5978515_5980501
transcript_65919.nic	chr19	+	789	2	FSM	ENSG00000266983.2	ENST00000685063.1	787	2	-2	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAACGGTTTTAAAAA	-15	True	NA	NA	False	AATGAA	-15	NA	5978361	6012755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5978515_6012119
transcript_65920.known	chr19	-	4532	12	FSM	ENSG00000130382.9	ENST00000252674.9	4532	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	7.39890543613666	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGCATGCATCTGCCTGGT	-20	True	NA	-6	True	AATAAA	-17	NA	6279975	6210380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6213171_6213336_6213409_6213725_6213798_6213938_6214039_6216404_6216514_6217953_6218042_6222120_6222685_6226976_6227103_6230569_6230714_6262227_6262311_6270578_6270760_6279772
transcript_65925.known	chr19	+	745	5	FSM	ENSG00000125656.11	ENST00000596149.5	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_1	38.0558799661761	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGACCCCCAGCTGGGC	8	True	NA	NA	False	NA	NA	NA	6361803	6368754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
transcript_65926.known	chr19	+	621	4	FSM	ENSG00000125656.11	ENST00000596605.2	621	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	248.666219838741	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGTCTGGGACACCC	39	False	NA	20	True	ATTAAA	-15	NA	6361887	6368902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6361941_6362445_6362543_6366257_6366364_6368537
transcript_65929.nnic	chr19	+	1399	4	NNC	ENSG00000125652.8	novel	556	4	NA	NA	-332	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	256.019530504999	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	162	False	NA	15	True	AATAAA	-22	NA	6373138	6375031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_6374018_6374202_6374377_6374464_6374590_6374810
transcript_6593.known	chr1	+	555	1	FSM	ENSG00000226084.5	ENST00000471722.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43662	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	41	False	NA	NA	False	AAGAAA	-34	NA	77129113	77129668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77129100_77129700
transcript_65931.known	chr19	+	603	4	FSM	ENSG00000125652.8	ENST00000596657.1	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	271.101866873362	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGGGACATTGCAGTG	494	False	NA	11	True	AATAAA	-18	NA	6373470	6375027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6373558_6374202_6374377_6374464_6374590_6374810
transcript_65934.known	chr19	+	556	4	FSM	ENSG00000125652.8	ENST00000599849.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	273.45850792315	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	727	False	NA	15	True	AATAAA	-22	NA	6373703	6375031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6373740_6374202_6374377_6374464_6374590_6374810
transcript_65939.known	chr19	+	970	4	FSM	ENSG00000125652.8	ENST00000245812.8	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	48.8011839564939	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCAGCACTGCAGCT	-6	True	NA	3	True	AATAAA	-13	NA	6372793	6375250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6373025_6374202_6374377_6374464_6374590_6374810
transcript_6594.known	chr1	+	3280	14	FSM	ENSG00000154027.19	ENST00000354567.7	3280	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	10.6254133229735	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTTTTTCTATTTATT	-8	True	NA	NA	False	AATAAA	-18	NA	77282018	77559966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77282374_77286940_77287128_77293792_77293961_77297558_77297729_77297833_77297948_77340376_77340569_77410980_77411072_77417638_77417716_77483316_77483360_77486307_77486353_77518563_77518728_77521826_77521944_77535846_77536039_77558601
transcript_65940.known	chr19	-	2432	13	FSM	ENSG00000125651.14	ENST00000394456.10	2432	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_8	23.1641185649031	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGATTTCTTTGTTT	-13	True	NA	-35	True	AATAAA	-18	NA	6393164	6379571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
transcript_65941.known	chr19	-	1382	10	FSM	ENSG00000125651.14	ENST00000595047.5	1382	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	136.573138728749	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAGGAGGAGAAGAAG	436	False	NA	NA	False	NA	NA	NA	6393205	6381412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392202_6392411_6392856_6392904_6392983
transcript_65942.known	chr19	-	2993	20	FSM	ENSG00000088247.19	ENST00000398148.7	2993	20	0	0	0	0	multi-exon	FALSE	canonical	2	137	junction_1	99.684488411773	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTGCGGGTGCTGTCT	9005	False	NA	28	True	AATAAA	-16	NA	6424794	6413347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452
transcript_65950.known	chr19	-	2422	12	FSM	ENSG00000205744.10	ENST00000590818.5	2422	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	11.1258763235505	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACTAATTTTATATAAAT	5569	False	NA	-6	True	AATAAA	-17	NA	6476215	6467207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6468119_6468233_6468442_6468577_6468646_6468845_6468954_6469595_6469641_6470294_6470367_6471264_6471306_6471405_6471497_6472888_6472994_6475273_6475400_6475483_6475752_6475836
transcript_65958.known	chr19	+	733	5	FSM	ENSG00000130545.16	ENST00000356762.7	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	68.9002902751505	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	9	True	NA	NA	False	TATAAA	-24	NA	6464282	6467221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465_6466610_6466950
transcript_65959.known	chr19	+	1443	4	FSM	ENSG00000130545.16	ENST00000598494.5	1443	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	116.110101005707	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	123	False	NA	NA	False	TATAAA	-24	NA	6463776	6467221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6464214_6464607_6464784_6465544_6465619_6466465
transcript_65960.known	chr19	+	1086	4	FSM	ENSG00000130545.16	ENST00000600229.6	1086	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	9.41629792788369	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	-3	True	NA	NA	False	TATAAA	-24	NA	6464270	6467221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465
transcript_65961.known	chr19	+	688	1	FSM	ENSG00000275234.1	ENST00000615487.1	688	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGTTCAGTTCTGATT	4933	False	NA	-16	True	AATAAA	-38	NA	6469464	6470152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6469500_6470200
transcript_65962.known	chr19	-	734	4	FSM	ENSG00000125648.15	ENST00000595810.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	123.169260234308	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGTCAGGTTTTTTG	5802	False	NA	-2	True	AATACA	-19	NA	6454009	6436078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6436465_6444150_6444302_6452311_6452480_6453980
transcript_65965.nnic	chr19	-	1155	4	Fusion	ENSG00000125726.11_ENSG00000125735.11	novel	911	3	NA	NA	8716	0	multi-exon	FALSE	canonical	1	1	junction_2	6.59966329107444	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGTGGCGTGCA	9106	False	NA	-6	True	ATTAAA	-15	NA	6661401	6585838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_6586406_6590102_6590137_6623561_6623723_6661008
transcript_65966.nnic	chr19	-	1087	3	Fusion	ENSG00000125726.11_ENSG00000125735.11	novel	911	3	NA	NA	8750	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGTGGCGTGCA	9140	False	NA	-6	True	ATTAAA	-15	NA	6661367	6585838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_6586406_6623561_6623723_6661008
transcript_65967.known	chr19	-	911	3	FSM	ENSG00000125726.11	ENST00000245903.4	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGTGGCGTGCA	9664	False	6591167	-6	True	ATTAAA	-15	NA	6591150	6585838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6586406_6590102_6590137_6590840
transcript_65969.nnic	chr19	-	3236	2	NNC	ENSG00000125735.11	novel	4336	4	NA	NA	8727	5078	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGAGTGTGGCGTTTCTCT	9117	False	NA	-4	True	AATAAA	-18	NA	6661390	6656174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_6659029_6661008
transcript_65977.nic	chr19	-	2030	18	NIC	ENSG00000125734.16	novel	2009	18	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	71.0930965263324	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-36	True	NA	-4	True	NA	NA	NA	6737307	6730054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_6730385_6730986_6731055_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_65984.known	chr19	-	2009	18	FSM	ENSG00000125734.16	ENST00000430424.8	2009	18	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	47.2346714485367	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAATAATGACCAAT	11	True	NA	-35	True	NA	NA	NA	6737260	6730085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_65985.nic	chr19	-	1956	18	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	55	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_17	61.3514466007119	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	135	False	NA	-4	True	NA	NA	NA	6737454	6730054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737267
transcript_65986.known	chr19	-	1834	18	FSM	ENSG00000125734.16	ENST00000597706.5	1834	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	63.0208950903832	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCAGCTATGTGTACA	29	False	NA	-47	True	NA	NA	NA	6737560	6730097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732471_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_6599.known	chr1	-	6412	15	FSM	ENSG00000036549.13	ENST00000370801.8	6412	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	71.3748726722478	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	1	True	NA	-5	True	TATAAA	-19	NA	77682658	77562415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
transcript_65994.nic	chr19	-	2013	17	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	-29	0	intron_retention	FALSE	canonical	3	172	junction_16	29.6267800098154	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-20	True	NA	-4	True	NA	NA	NA	6737609	6730054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_66.known	ERCC-00156	+	478	1	FSM	ERCC-00156A	DQ883643	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00156_+_0_500
transcript_66013.known	chr19	-	595	4	FSM	ENSG00000125734.16	ENST00000595620.5	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	29.3295452099452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGAGTGCTTCCGGTGTC	1	True	NA	NA	False	AATGAA	-18	NA	6737549	6735373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6735705_6735907_6735959_6736591_6736712_6737456
transcript_66014.known	chr19	-	368	2	FSM	ENSG00000125730.17	ENST00000601475.1	368	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGGAGTTCTTTGCC	7940	False	NA	-1	True	GATAAA	-18	NA	6678330	6677834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6678024_6678151
transcript_66015.known	chr19	-	816	3	FSM	ENSG00000125734.16	ENST00000601402.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGGGGACCGGGGGC	-2	True	NA	NA	False	NA	NA	NA	6737273	6735621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6735705_6735907_6735959_6736591
transcript_66016.known	chr19	+	1920	14	FSM	ENSG00000125733.18	ENST00000596758.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	195.520001549502	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTATACAAAAATGGG	67	False	NA	28	True	NA	NA	NA	6739761	6751464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751033
transcript_66017.known	chr19	+	2035	14	FSM	ENSG00000125733.18	ENST00000313285.12	2035	14	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_7	44.0587289607081	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	-15	True	NA	33	True	TATAAA	-18	NA	6739679	6751526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_66026.nic	chr19	-	1180	4	ISM	ENSG00000125731.13	ENST00000597687.1	859	6	-63	4502	-63	-1788	5prime_fragment	FALSE	canonical	3	67	junction_2	17.5941909605289	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACAATTATTCCAAG	NA	False	NA	NA	False	NA	NA	NA	6767526	6759117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6759671_6760637_6760988_6763679_6763817_6767386
transcript_66027.nic	chr19	-	830	3	ISM	ENSG00000125731.13	ENST00000437152.7	2013	8	-91	6953	-63	-1788	5prime_fragment	TRUE	canonical	2	21	junction_1	44.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACAATTATTCCAAG	NA	False	NA	NA	False	NA	NA	NA	6767526	6759117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6759671_6763679_6763817_6767386
transcript_66028.nic	chr19	-	855	2	ISM	ENSG00000125731.13	ENST00000245908.11	2281	10	13719	0	1525	0	3prime_fragment	FALSE	canonical	3	120	junction_1	0	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGCTGTGTACTTTCT	NA	False	NA	-1	True	AATAAA	-22	NA	6753716	6752159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6752754_6753455
transcript_66029.nic	chr19	-	1450	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-101	7601	-63	-5177	5prime_fragment	FALSE	canonical	3	110	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGGCCGGAAGAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	6767526	6762506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6763817_6767386
transcript_66030.nic	chr19	-	1277	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-101	7774	-63	-5350	5prime_fragment	FALSE	canonical	3	110	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTATCCAGGCATGGG	NA	False	NA	NA	False	AAAAAG	-2	NA	6767526	6762679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6763817_6767386
transcript_66031.nic	chr19	-	735	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-101	8316	-63	-5892	5prime_fragment	FALSE	canonical	3	110	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTATGCGCCTGTA	NA	False	NA	NA	False	AATAAA	-20	NA	6767526	6763221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6763817_6767386
transcript_66032.known	chr19	+	5759	8	FSM	ENSG00000130544.12	ENST00000252840.11	5759	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.99489470117416	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	5	True	NA	NA	False	ATTAAA	-30	NA	7069702	7087968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_66034.nnic	chr19	+	976	8	NNC	ENSG00000130544.12	novel	5759	8	NA	NA	-6	8238	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.73401357108153	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAACTGGTCCCTTAAAAC	-1	True	NA	NA	False	AATAAA	-18	NA	7069696	7096206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7095904
transcript_66035.known	chr19	+	5736	8	FSM	ENSG00000130544.12	ENST00000414706.2	5736	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	5.72855361593241	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	7	True	NA	NA	False	ATTAAA	-30	NA	7069704	7087968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075675_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_66040.nic	chr19	+	1316	7	ISM	ENSG00000130544.12	ENST00000252840.11	5759	8	-263	5531	-263	-5531	5prime_fragment	FALSE	canonical	3	10	junction_3	4.31083905212585	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGGCTTTATTAAATAG	-4	True	NA	NA	False	NA	NA	NA	7069439	7082437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969
transcript_66045.nic	chr19	+	1594	6	ISM	ENSG00000130544.12	ENST00000252840.11	5759	8	-24	5528	-24	-5528	intron_retention	FALSE	canonical	3	10	junction_3	4.17612260356422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTTATTAAATAGTTA	235	False	NA	NA	False	NA	NA	NA	7069678	7082440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359
transcript_6605.nic	chr1	-	1017	5	ISM	ENSG00000036549.13	ENST00000370801.8	6412	15	-18	70416	-1	350	5prime_fragment	FALSE	canonical	0	0	junction_4	100.614052199482	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAATTAAAAAGGTGAAT	-17	True	NA	5	True	ACTAAA	-41	NA	77682676	77632831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
transcript_66057.nic	chr19	+	1268	6	ISM	ENSG00000104880.19	ENST00000594665.2	5368	20	-52	24933	-39	3105	5prime_fragment	FALSE	canonical	3	152	junction_1	17.9710878913882	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATTCTTCACTGTGGG	-21	True	NA	NA	False	AAAAAG	-13	NA	7395115	7447534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042
transcript_6606.known	chr1	-	587	5	FSM	ENSG00000036549.13	ENST00000463166.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	25.3019268040993	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAACGGCTTGGATGAA	3	True	NA	NA	False	NA	NA	NA	77683403	77633311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
transcript_66060.known	chr19	+	5396	20	FSM	ENSG00000104880.19	ENST00000319670.14	5396	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	42.079465781343	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTGCACGTTCTTGGA	18	True	NA	22	True	AATAAA	-22	NA	7395154	7472485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7395248_7440343_7440483_7441652_7441766_7441911_7442053_7444203_7444455_7447042_7447169_7451148_7451267_7453466_7453716_7456326_7456404_7458511_7458691_7459902_7459995_7462151_7462335_7463817_7463956_7464559_7464688_7466917_7466975_7467070_7467119_7467213_7467685_7468824_7469132_7469903_7470030_7470125
transcript_66061.known	chr19	+	1690	9	FSM	ENSG00000198723.11	ENST00000361664.7	1690	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTTCCCATCAGTCAG	-6	True	NA	5	True	AATAAA	-20	NA	7497547	7508450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7497683_7500805_7501400_7504120_7504225_7504310_7504412_7505323_7505437_7505516_7505627_7505963_7506166_7507055_7507142_7508205
transcript_66064.known	chr19	-	1078	5	FSM	ENSG00000104883.8	ENST00000221480.6	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.07106781186548	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCAGGGGTGAAGG	-12	True	NA	-6	True	ATTAAA	-16	NA	7489035	7476874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_66066.known	chr19	-	806	5	FSM	ENSG00000104883.8	ENST00000593547.1	806	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	14.6180539060437	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATTAAACATTGTGGT	5	True	NA	-32	True	NA	NA	NA	7488972	7476900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7477254_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_66067.nnic	chr19	-	1018	4	NIC	ENSG00000104883.8	novel	1078	5	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	14.6969384566991	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCAGGGGTGAAGG	-15	True	NA	-6	True	ATTAAA	-16	NA	7489038	7476874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_7477437_7482032_7482212_7485837_7486027_7488950
transcript_66070.known	chr19	+	589	2	FSM	ENSG00000198723.11	ENST00000601292.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTCTTTCCCATCAGT	49	False	NA	2	True	AATAAA	-17	NA	7506794	7508447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7507142_7508205
transcript_66072.known	chr19	+	2084	14	FSM	ENSG00000090674.16	ENST00000264079.11	2084	14	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_8	21.8033166143276	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGAGGAGCAGTCCTTGC	-10	True	NA	31	True	AATAAA	-32	NA	7522623	7534009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527629_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
transcript_66073.nic	chr19	+	1601	10	ISM	ENSG00000032444.17	ENST00000600737.6	4372	32	19414	0	-130	0	3prime_fragment	FALSE	canonical	3	317	junction_5	30.2683471551747	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	NA	False	NA	24	True	AATAAA	-16	NA	7555130	7561764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_66076.nic	chr19	+	1463	9	ISM	ENSG00000032444.17	ENST00000600737.6	4372	32	19791	0	247	0	3prime_fragment	FALSE	canonical	3	317	junction_4	28.6222706122348	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	NA	False	NA	24	True	AATAAA	-16	NA	7555507	7561764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_66077.known	chr19	+	492	2	FSM	ENSG00000090674.16	ENST00000602227.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	5847	False	NA	12	True	AATAAA	-13	NA	7533393	7533990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7533654_7533758
transcript_66078.known	chr19	+	4372	32	FSM	ENSG00000032444.17	ENST00000600737.6	4372	32	0	0	0	0	multi-exon	TRUE	canonical	3	184	junction_18	55.1506686623307	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	-7	True	NA	24	True	AATAAA	-16	NA	7535716	7561764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_66079.known	chr19	+	753	8	FSM	ENSG00000032444.17	ENST00000601668.5	753	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	81.0439538089029	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGAAGTGCTTTATATG	6606	False	NA	NA	False	NA	NA	NA	7534152	7540024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7534240_7534378_7534447_7534749_7534903_7535508_7535578_7535932_7536021_7536190_7536274_7536448_7536547_7539917
transcript_6608.known	chr1	-	420	2	FSM	ENSG00000036549.13	ENST00000458763.2	420	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATTCTGTTTGTTTAG	-16	True	NA	NA	False	AATAAA	-9	NA	77682675	77676981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77677311_77682584
transcript_66080.nic	chr19	+	970	5	ISM	ENSG00000076826.10	ENST00000595692.1	1667	6	1001	-209	-771	0	3prime_fragment	FALSE	canonical	3	305	junction_2	12.9879752078605	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAACCTTGTCCCCCCCT	NA	False	NA	30	True	AATAAA	-16	NA	7615634	7618304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7615720_7616522_7616623_7617325_7617439_7617542_7617662_7617751
transcript_66081.known	chr19	-	2647	19	FSM	ENSG00000076924.12	ENST00000358368.5	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_7	14.6181858664026	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGAGCCTCCTTCCTG	7	True	NA	-2	True	AATACA	-18	NA	7629545	7619524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7619648_7619746_7619857_7619945_7620076_7620274_7620447_7620546_7620670_7620845_7621037_7621134_7621298_7622330_7622445_7622529_7622662_7622761_7622894_7623169_7623290_7623730_7623883_7624300_7624446_7625879_7626045_7626135_7626271_7627242_7627441_7627727_7627852_7628149_7628299_7629476
transcript_6610.known	chr1	-	4502	25	FSM	ENSG00000077254.14	ENST00000370793.5	4502	25	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_24	73.196652928942	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGAATGTTGAATTT	18	False	77759870	-8	True	AATAAA	-17	NA	77759852	77695990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_66105.known	chr19	+	219	3	FSM	ENSG00000229833.10	ENST00000456958.7	219	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1678.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTAAGTGTTTTATTC	16	True	NA	13	True	AATATA	-22	NA	7629813	7631620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7629861_7630822_7630847_7631472
transcript_66107.known	chr19	+	1815	1	FSM	ENSG00000229833.10	ENST00000623154.1	1815	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTGTTTTATTCTTT	11	True	NA	16	True	AATATA	-25	NA	7629808	7631623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7629800_7631600
transcript_66108.known	chr19	+	375	5	FSM	ENSG00000229833.10	ENST00000598540.6	375	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	1542.1656039479	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	41	False	NA	17	True	AATATA	-26	NA	7629838	7631624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231_7631322_7631472
transcript_66109.known	chr19	+	1859	19	FSM	ENSG00000076944.17	ENST00000414284.6	1859	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	124.249214419853	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	1	True	NA	21	True	AATAAA	-21	NA	7637126	7647873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640739_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_66110.known	chr19	+	1914	19	FSM	ENSG00000076944.17	ENST00000441779.6	1914	19	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_4	125.102291479147	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCCTACCTCACCT	-13	True	NA	20	True	AATAAA	-20	NA	7637112	7647872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640697_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_66111.known	chr19	+	811	7	FSM	ENSG00000076944.17	ENST00000599400.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	201.948563308141	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAGAGAAATAAACTCTT	4113	False	NA	-14	True	NA	NA	NA	7643214	7647838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7643246_7644613_7644753_7645196_7645307_7646171_7646345_7647161_7647248_7647353_7647512_7647724
transcript_66112.known	chr19	+	474	2	FSM	ENSG00000229833.10	ENST00000600836.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	3386	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	727	False	NA	17	True	AATATA	-26	NA	7630524	7631624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7630847_7631472
transcript_66113.known	chr19	-	1482	10	FSM	ENSG00000104921.15	ENST00000360067.8	1482	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.36986977843755	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCTGGGTCTGGTC	2649	False	NA	-1	True	AATAAA	-41	NA	7699479	7688757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7689431_7690158_7690266_7690405_7690558_7696824_7696915_7697012_7697076_7697235_7697299_7697526_7697590_7698355_7698410_7698740_7698855_7699376
transcript_66116.nic	chr19	-	1030	5	ISM	ENSG00000182566.15	ENST00000328853.11	1299	9	1228	1	1228	0	3prime_fragment	FALSE	canonical	2	4	junction_3	3.64005494464026	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTCTGGCGAGATC	7901	False	NA	NA	False	AATAAA	-22	NA	7730882	7728957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_7729505_7729820_7729937_7730018_7730168_7730350_7730441_7730754
transcript_6612.known	chr1	-	4327	24	FSM	ENSG00000077254.14	ENST00000370794.7	4327	24	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_11	57.5423243589238	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	18	False	77759870	-4	True	AATAAA	-21	NA	77759852	77695986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_66120.nic	chr19	-	1097	3	NIC	ENSG00000182566.15	novel	1295	8	NA	NA	1228	0	intron_retention	FALSE	canonical	0	0	junction_1	5.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTCTGGCGAGATC	7901	False	NA	NA	False	AATAAA	-22	NA	7730882	7728957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_7729505_7730018_7730441_7730754
transcript_66122.nic	chr19	+	818	4	ISM	ENSG00000268297.1	ENST00000596555.1	870	9	1214	426	1214	-426	internal_fragment	FALSE	canonical	2	5	junction_1	5.18544972870135	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	1290	False	NA	NA	False	NA	NA	NA	7788762	7790195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7788901_7789208_7789305_7789495_7789644_7789759
transcript_66127.known	chr19	+	3590	3	FSM	ENSG00000171017.11	ENST00000306708.11	3590	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.5	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTTTTGATCTCTTA	-2	True	NA	7	True	AATAAA	-18	NA	7888509	7902016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7888601_7895598_7895742_7898660
transcript_66128.known	chr19	+	3375	11	FSM	ENSG00000076984.18	ENST00000397979.4	3375	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	7.44580418759451	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	-6	True	NA	19	True	AATAAA	-19	NA	7903876	7914478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_66131.known	chr19	+	3396	12	FSM	ENSG00000076984.18	ENST00000397983.7	3396	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.1775389782253	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCCTTTTCTTCCAC	2	True	NA	0	True	TTTAAA	-44	NA	7903884	7914459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7904069_7905807_7905856_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_66132.nic	chr19	+	290	2	ISM	ENSG00000260001.7	ENST00000566166.1	479	3	386	0	386	0	3prime_fragment	FALSE	canonical	3	71	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTAAGTTCTGGTGCAGT	331	False	NA	4	True	AATAAA	-14	NA	7918013	7919090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7918130_7918916
transcript_66133.known	chr19	+	1413	5	FSM	ENSG00000104976.12	ENST00000597584.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	81.8138130146738	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	-5	True	NA	33	True	AATAAA	-24	NA	7921014	7923250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7921120_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_66134.known	chr19	+	1520	5	FSM	ENSG00000104976.12	ENST00000221573.11	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	9.90896059130321	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	-5	True	NA	33	True	AATAAA	-24	NA	7920337	7923250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7920550_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_66138.known	chr19	-	1797	13	FSM	ENSG00000104980.8	ENST00000595831.5	1797	13	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_9	127.884143531036	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATTGCAGAAGAGCAGC	93	False	NA	-25	True	AATAAA	-4	NA	7943635	7926735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934242_7935064_7935146_7938026_7938198_7941101_7941198_7943606
transcript_66149.known	chr19	-	556	3	FSM	ENSG00000104980.8	ENST00000600000.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	11.5	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCCGCCTCAGCCTT	-3	True	NA	NA	False	NA	NA	NA	7943666	7937797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7938198_7941101_7941198_7943606
transcript_66151.known	chr19	-	6054	6	FSM	ENSG00000066044.15	ENST00000407627.7	6054	6	0	0	0	0	multi-exon	FALSE	canonical	3	1825	junction_1	117.117035481607	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGTGTAGGGGTGAT	-6	True	NA	1	True	AATAAA	-20	NA	8005641	7958572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7963808_7967564_7967791_7973724_7973879_7981082_7981187_7991643_7991832_8005494
transcript_66152.nnic	chr19	+	1037	4	Fusion	ENSG00000267939.1_ENSG00000289255.1	novel	421	2	NA	NA	-24	0	multi-exon	FALSE	canonical	2	2	junction_3	6.34209919681348	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTGTATGTTATGAG	-6	True	NA	15	True	AATAAA	-19	NA	8005787	8016025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_8005959_8008292_8008431_8008611_8008777_8015462
transcript_66155.nnic	chr19	+	883	3	Fusion	ENSG00000267939.1_ENSG00000289255.1	novel	421	2	NA	NA	-3	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTGTATGTTATGAG	-8	True	NA	15	True	AATAAA	-19	NA	8005808	8016025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_8005964_8008611_8008777_8015462
transcript_66157.nnic	chr19	+	904	3	Fusion	ENSG00000267939.1_ENSG00000289255.1	novel	421	2	NA	NA	-3	0	multi-exon	FALSE	canonical	1	3	junction_2	1	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTGTGTATGTTATGAG	-8	True	NA	15	True	AATAAA	-19	NA	8005808	8016025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_8005964_8008611_8008877_8015541
transcript_66159.known	chr19	+	991	6	FSM	ENSG00000131142.14	ENST00000315626.6	991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.979795897113271	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTGTTACATTTCT	-1	True	NA	NA	False	AATAAA	-22	NA	8052759	8062650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8052823_8052999_8053123_8056151_8056270_8056365_8056500_8057800_8057921_8062217
transcript_6616.known	chr1	-	2917	22	FSM	ENSG00000077254.14	ENST00000370792.7	2917	22	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	77.703722438025	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	18	False	77759870	NA	False	AATAAA	-15	NA	77759852	77711651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_66160.known	chr19	+	958	6	FSM	ENSG00000131142.14	ENST00000253451.9	958	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.894427190999916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACCTTGGGGGGTGA	1	True	NA	NA	False	NA	NA	NA	8052761	8062622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8052823_8052999_8053123_8056151_8056270_8056365_8056500_8057803_8057921_8062217
transcript_66161.known	chr19	+	744	4	FSM	ENSG00000131142.14	ENST00000458625.5	744	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTGTTACATTTCT	33	False	NA	NA	False	AATAAA	-22	NA	8053049	8062650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8053123_8056151_8056270_8057800_8057921_8062217
transcript_66164.known	chr19	+	1780	12	FSM	ENSG00000090661.12	ENST00000251363.10	1780	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	98.782422232646	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	19	True	NA	15	True	ATTAAA	-16	NA	8209369	8262421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8209495_8210705_8210863_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_66168.known	chr19	+	1330	4	FSM	ENSG00000233927.5	ENST00000600659.3	1330	4	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_3	815.075592949649	131517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGCTGAAGTGTGGTT	2	True	NA	25	True	AATAAA	-30	NA	8321495	8323340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8321570_8321655_8321704_8321952_8322092_8322271
transcript_6617.nic	chr1	-	2942	22	ISM	ENSG00000077254.14	ENST00000370793.5	4502	25	-1	15661	-1	0	5prime_fragment	FALSE	canonical	3	165	junction_21	71.2346255839544	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	17	False	77759870	NA	False	AATAAA	-15	NA	77759853	77711651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_66178.known	chr19	-	1119	4	FSM	ENSG00000167775.11	ENST00000537716.6	1119	4	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_3	652.793654653257	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-16	True	NA	-6	True	ATTAAA	-17	NA	8308350	8302126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8308148
transcript_66190.known	chr19	-	1253	5	FSM	ENSG00000167775.11	ENST00000301458.10	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	1336	junction_2	75.0866166503725	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-24	True	NA	-6	True	ATTAAA	-17	NA	8308358	8302126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
transcript_66191.known	chr19	-	577	2	FSM	ENSG00000167775.11	ENST00000598299.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	3	1338	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTGCCAGTGCACTC	-1	True	NA	NA	False	NA	NA	NA	8308335	8304766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8305157_8308148
transcript_66192.known	chr19	-	569	5	FSM	ENSG00000267855.6	ENST00000593729.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	792.939625696686	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATCCCTGCCCTCCAG	1	True	NA	-5	True	AATAAA	-13	NA	8321375	8308767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8320856_8320907_8321307
transcript_66193.known	chr19	-	414	4	FSM	ENSG00000267855.6	ENST00000601101.5	414	4	0	0	0	0	multi-exon	FALSE	canonical	2	35	junction_1	865.499085306661	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACAGAAGATCCCTGCCC	1	True	NA	-10	True	AATAAA	-8	NA	8321375	8308772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8308885_8311411_8311596_8320856_8320907_8321307
transcript_66194.known	chr19	-	580	4	FSM	ENSG00000267855.6	ENST00000301457.3	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	1785	junction_2	59.5893353620334	3759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCATGAGCCACCACAC	1	True	NA	53	True	NA	NA	NA	8321375	8311283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8311596_8316495_8316646_8320856_8320907_8321307
transcript_66195.known	chr19	+	334	3	FSM	ENSG00000233927.5	ENST00000417088.2	334	3	0	0	0	0	multi-exon	FALSE	canonical	3	8750	junction_2	979	8535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTTGTCTGGGTT	140	False	NA	77	True	AATAAA	-21	NA	8321633	8322396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8321704_8321952_8322092_8322271
transcript_66196.known	chr19	+	1872	7	FSM	ENSG00000167772.12	ENST00000301455.7	1872	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	6.89806736219163	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTCTTTGTTCTTGTT	-1	True	NA	23	True	AATAAA	-16	NA	8364154	8374370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8364640_8365953_8366065_8366201_8366320_8369218_8369333_8371055_8371152_8371240_8371523_8373704
transcript_66200.nnic	chr19	-	826	3	NNC	ENSG00000269386.6	novel	1020	3	NA	NA	-2510	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	26.5	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAAGTGTTCTGAGGTT	9728	False	NA	NA	False	AAAAAG	-23	NA	8380337	8374378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_8374609_8376961_8377068_8379847
transcript_66203.known	chr19	-	1013	3	FSM	ENSG00000269386.6	ENST00000593581.6	1020	3	0	7	0	-6	multi-exon	FALSE	canonical	3	43	junction_2	6.5	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAAGTGTTCTGAGGTT	-13	True	NA	NA	False	AAAAAG	-23	NA	8390685	8374378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8374609_8376961_8377068_8390008
transcript_66204.known	chr19	+	1590	5	FSM	ENSG00000185236.12	ENST00000328024.11	1590	5	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_4	166.244360806615	807	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	-7	True	NA	38	True	NA	NA	NA	8390359	8404434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484_8402566_8403412
transcript_66206.known	chr19	+	2568	17	FSM	ENSG00000099783.12	ENST00000348943.7	2568	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1062.72908559755	11797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	6019	False	NA	17	True	AATAAA	-17	NA	8444766	8489114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8465479_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_66214.known	chr19	+	2477	16	FSM	ENSG00000099783.12	ENST00000325495.9	2477	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1053.21734382478	11722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	-5	True	NA	17	True	AATAAA	-17	NA	8444974	8489114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_6622.nic	chr1	-	2780	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	157	junction_8	58.8082477208767	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	77759894	77711651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_6624.nic	chr1	-	2804	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-42	15665	-42	0	5prime_fragment	FALSE	canonical	3	226	junction_8	48.4564495191301	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	NA	False	NA	NA	False	AATAAA	-15	NA	77759894	77711651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_66243.known	chr19	+	832	10	FSM	ENSG00000099783.12	ENST00000601645.5	832	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1565.73133624002	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGGTCCCGCAGGTG	14	False	NA	NA	False	AATAAA	-15	NA	8444993	8471410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8466234_8466389_8467534_8467585_8468773_8468835_8471325
transcript_66244.known	chr19	+	2373	14	FSM	ENSG00000099783.12	ENST00000600806.5	2373	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1379.06246774424	9802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	-3	True	NA	13	True	AATAAA	-13	NA	8444976	8489110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_66245.known	chr19	+	2458	15	FSM	ENSG00000099783.12	ENST00000620401.4	2458	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1045.09599207588	9823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	10	True	NA	13	True	AATAAA	-13	NA	8444989	8489110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462590_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_66247.known	chr19	-	2307	8	FSM	ENSG00000133250.14	ENST00000393927.9	2307	8	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_1	40.5829963388207	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGTAACCAGGAGAGGTG	-6	True	NA	NA	False	AATAAA	-17	NA	8514167	8509677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8510765_8510850_8511025_8511485_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
transcript_66248.known	chr19	-	467	2	FSM	ENSG00000133250.14	ENST00000600906.1	467	2	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCCCTGAAACAATAGAAGC	-3	True	NA	NA	False	NA	NA	NA	8514164	8512995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8513342_8514043
transcript_66249.nic	chr19	-	953	4	ISM	ENSG00000142347.19	ENST00000644032.2	4180	28	51870	334	1050	-315	3prime_fragment	FALSE	canonical	0	0	junction_1	2.94392028877595	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACGAGTTAACTTACTAAG	-3	True	NA	-14	True	AATAAA	-17	NA	8525572	8521111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_8521605_8522376_8522547_8522633_8522830_8525478
transcript_66253.known	chr19	+	4056	7	FSM	ENSG00000130803.15	ENST00000247956.11	4056	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	21.8784521085626	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	7	True	NA	10	True	AATAAA	-23	NA	9140396	9163413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113
transcript_66254.nic	chr19	+	1143	7	NIC	ENSG00000130803.15	novel	4056	7	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	65.9865306121046	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTTTCTTTTAAATT	-10	True	NA	21	True	AATAAA	-34	NA	9140379	9163424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9163054
transcript_66264.nic	chr19	+	2386	10	NIC	ENSG00000270011.8	novel	2470	10	NA	NA	0	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	17.9594880182188	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCTGGCAATGTGGAC	-14	True	NA	17	True	AATAAA	-14	NA	9324173	9382185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_9324229_9324694_9324781_9364861_9364949_9371609_9371753_9376315_9376424_9378258_9378345_9378961_9379089_9379526_9379620_9380056_9380140_9380667
transcript_66270.known	chr19	+	827	9	FSM	ENSG00000270011.8	ENST00000603656.5	827	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	22.4833271559171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTGTGGGAAAGCCTTC	103	False	NA	NA	False	NA	NA	NA	9324290	9381190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324405_9324694_9324781_9364861_9364949_9376315_9376424_9378258_9378345_9378961_9379089_9379526_9379620_9380056_9380140_9381147
transcript_66280.nic	chr19	+	2733	7	NIC	ENSG00000188321.14	novel	2732	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_6	18.3431791743477	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	-17	True	NA	16	True	AATAAA	-18	NA	9324170	9343843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_66281.known	chr19	+	4675	7	FSM	ENSG00000188321.14	ENST00000603380.6	4675	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	17.6580167503476	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATACACTTCCCAATT	-9	True	NA	NA	False	AATAAA	-24	NA	9324178	9345871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_66283.known	chr19	+	1488	7	FSM	ENSG00000188321.14	ENST00000592896.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	24.6170672501823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTATAAAACACAGGCG	9	True	NA	NA	False	NA	NA	NA	9324196	9342465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9338018_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_66290.known	chr19	+	1398	6	FSM	ENSG00000188321.14	ENST00000592504.5	1398	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	17.4974283824795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATACTCATAAGGAGTA	-9	True	NA	NA	False	NA	NA	NA	9324178	9342084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101
transcript_66292.known	chr19	+	967	6	FSM	ENSG00000188321.14	ENST00000585352.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	22.9904327927945	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAAGATGGAGAAAAA	-9	True	NA	NA	False	NA	NA	NA	9324178	9342148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_66293.known	chr19	+	2991	6	FSM	ENSG00000188321.14	ENST00000587557.5	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	22.3839228018683	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	23	False	NA	16	True	AATAAA	-18	NA	9323771	9343843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_66295.known	chr19	+	588	6	FSM	ENSG00000188321.14	ENST00000592298.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	23.8880723374658	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTGCAGGGGAAAAC	38	False	NA	NA	False	NA	NA	NA	9324225	9341145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324405_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101
transcript_66300.known	chr19	+	2117	4	FSM	ENSG00000188321.14	ENST00000605750.5	2117	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	15.7550697307953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACACATTGAGAAGTC	9	True	NA	NA	False	NA	NA	NA	9324196	9343610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9341101_9341185_9341694
transcript_66304.nic	chr19	+	826	2	ISM	ENSG00000188321.14	ENST00000592504.5	1398	6	-11	16625	-11	-13123	5prime_fragment	FALSE	canonical	3	48	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATACTGATCTAGAGAAC	-20	True	NA	NA	False	AAAAAG	-13	NA	9324167	9325459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_9324229_9324694
transcript_66305.nic	chr19	+	948	2	ISM	ENSG00000188321.14	ENST00000585377.5	571	4	-5	13119	0	-13119	5prime_fragment	FALSE	canonical	3	19	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGATCTAGAGAACATCT	38	False	NA	NA	False	AAAAAG	-17	NA	9324225	9325463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_9324405_9324694
transcript_66306.known	chr19	+	2732	7	FSM	ENSG00000188321.14	ENST00000317221.11	2732	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.6731920015663	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	-9	True	NA	16	True	AATAAA	-18	NA	9324178	9343843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337866_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_66307.known	chr19	+	692	3	FSM	ENSG00000188321.14	ENST00000591652.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCCTGAGTTATCTCAATT	NA	False	NA	18	True	AATAAA	-20	NA	9339255	9343845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9339320_9341101_9341185_9343300
transcript_66317.known	chr19	-	3544	11	FSM	ENSG00000174652.20	ENST00000592904.7	3544	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	18.3709009033308	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCCGTTCATTAGCTA	-7	True	NA	-11	True	AATAAA	-16	NA	9435573	9412428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419216_9419300_9420064_9420219_9433667_9433787_9434074_9434236_9434797_9434860_9435107_9435194_9435283
transcript_66318.nnic	chr19	+	1091	4	FSM	ENSG00000287275.2	ENST00000690644.1	1091	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCTATGTCTTTATT	NA	False	NA	NA	False	NA	NA	NA	9435589	9462529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9435773_9454350_9454505_9460089_9460340_9462025
transcript_66321.known	chr19	-	7104	8	FSM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	8.22638859936455	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-6	True	NA	-25	True	AATAAA	-19	NA	9538645	9523222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258_9538346_9538574
transcript_66322.nic	chr19	-	2549	7	ISM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	4784	0	0	intron_retention	FALSE	canonical	3	14	junction_2	7.56453714527348	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-6	True	NA	NA	False	NA	NA	NA	9538645	9528006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_66323.known	chr19	-	919	6	FSM	ENSG00000130818.12	ENST00000589289.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.3060960503321	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCTACGAATGGAGGAAT	251	False	NA	NA	False	NA	NA	NA	9538388	9529296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9529637_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_66324.known	chr19	-	2402	6	FSM	ENSG00000130818.12	ENST00000593003.5	2402	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.2889326333361	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	49	False	NA	NA	False	NA	NA	NA	9538590	9528006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9536207_9536357_9538258
transcript_66328.nnic	chr19	+	778	3	NNC	ENSG00000278611.3	novel	909	2	NA	NA	-23	-6	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTATTGGTGGTC	NA	False	NA	5	True	AATAAA	-16	NA	9538665	9539728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_9538999_9539135_9539258_9539405
transcript_66329.known	chr19	+	859	2	FSM	ENSG00000278611.3	ENST00000619671.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTGGTGGTCTCTTCA	0	True	NA	11	True	AATAAA	-22	NA	9538738	9539734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9538999_9539135
transcript_66330.known	chr19	+	595	2	FSM	ENSG00000278611.3	ENST00000613560.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTGGTGGTCTCTTCA	-6	True	NA	11	True	AATAAA	-22	NA	9538732	9539734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9538999_9539405
transcript_66338.nic	chr19	-	1157	5	NIC	ENSG00000197961.12	novel	7177	6	NA	NA	-36	407	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	23.7631542519086	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGTGGGAAAGCATTCA	-8	True	NA	1	True	AATAAA	-16	NA	9584540	9566252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_9567110_9567647_9567706_9568094_9568176_9569001_9569083_9584460
transcript_6634.nic	chr1	-	1613	12	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-42	27423	-42	-5386	5prime_fragment	FALSE	canonical	3	286	junction_11	42.4927801354108	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAATACAGAAGTGTTA	NA	False	NA	NA	False	AAAACA	-4	NA	77759894	77723409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_66342.known	chr19	-	6987	4	FSM	ENSG00000197961.12	ENST00000320451.7	6987	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6.84754619472471	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-2	True	NA	-27	True	AATAAA	-17	NA	9584504	9560328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9567110_9568094_9568176_9569001_9569083_9584460
transcript_66353.nic	chr19	-	1961	7	NIC	ENSG00000171469.11	novel	659	7	NA	NA	-12	-295	combination_of_known_junctions	TRUE	canonical	3	31	junction_3	47.109800820353	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGGTTGCCTGAGTCT	542	False	NA	-12	True	ATTAAA	-21	NA	9621248	9610050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9617620_9617759_9618090_9618180_9619431_9619583_9621161
transcript_66364.nic	chr19	-	2052	6	NIC	ENSG00000171469.11	novel	4529	6	NA	NA	0	-295	intron_retention	FALSE	canonical	0	0	junction_5	54.9414233525124	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCATGGTTGCCTGAGTCT	-14	True	NA	-12	True	ATTAAA	-21	NA	9621231	9610050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_9611337_9614020_9614104_9617044_9617172_9618090_9618180_9619431_9619583_9620915
transcript_66365.known	chr19	-	880	6	FSM	ENSG00000171469.11	ENST00000495503.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	51.1804650232879	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAGCAGTTCATACA	595	False	NA	NA	False	NA	NA	NA	9621195	9610936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9611337_9614020_9614104_9617048_9617172_9618090_9618180_9619431_9619583_9621161
transcript_66366.known	chr19	-	956	6	FSM	ENSG00000171469.11	ENST00000443819.5	956	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	50.9297555462423	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCTTCACACCTAAAGCA	-14	True	NA	NA	False	NA	NA	NA	9621231	9610955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9611337_9614020_9614104_9617044_9617227_9618090_9618180_9619431_9619583_9621161
transcript_66376.known	chr19	-	4419	5	FSM	ENSG00000171469.11	ENST00000424629.5	4419	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.1977535138194	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTGATGCATGTCTATA	9	True	NA	-12	True	AATAAA	-17	NA	9621208	9607325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9611337_9614020_9614104_9617044_9617172_9619431_9619583_9621161
transcript_66379.known	chr19	-	625	5	FSM	ENSG00000171469.11	ENST00000465974.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	54.4351678604925	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATCTTGAAGTTCTCAA	-15	True	NA	NA	False	NA	NA	NA	9621232	9611105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9611337_9614020_9614104_9618090_9618180_9619431_9619583_9621161
transcript_66380.known	chr19	-	2017	5	FSM	ENSG00000171469.11	ENST00000326044.9	2017	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	48.8793156662407	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGAAACCATCCATAAC	-13	True	NA	-96	True	NA	NA	NA	9621230	9609755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9611337_9617044_9617172_9618090_9618180_9619431_9619583_9621161
transcript_66385.known	chr19	-	728	4	FSM	ENSG00000171469.11	ENST00000490893.5	728	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.4682772904876	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGATGAAAGTGTCCTT	-19	True	NA	NA	False	NA	NA	NA	9621236	9617811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9618180_9619431_9619583_9620915_9621050_9621161
transcript_66388.known	chr19	-	326	3	FSM	ENSG00000171469.11	ENST00000485150.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	21.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATATGCTTTCATCCAAT	-2	True	NA	NA	False	NA	NA	NA	9621219	9618062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9618180_9619431_9619583_9621161
transcript_66389.nnic	chr19	-	934	2	NNC	ENSG00000171469.11	novel	4529	6	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGTGATGCATGTCT	547	False	NA	-15	True	AATAAA	-14	NA	9621243	9607328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_9607982_9620962
transcript_66393.known	chr19	+	2486	5	FSM	ENSG00000267106.9	ENST00000586614.6	2486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	55.1333610439269	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-1	True	NA	NA	False	NA	NA	NA	9621504	9635446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9626783_9626861_9627715_9627807_9632227_9632418_9633459
transcript_66402.known	chr19	+	2413	4	FSM	ENSG00000267106.9	ENST00000587536.6	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	41.4916323558806	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-19	True	NA	NA	False	NA	NA	NA	9621486	9635446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9633459
transcript_66408.known	chr19	+	2411	4	FSM	ENSG00000267106.9	ENST00000588765.5	2411	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	63.6605581711837	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-3	True	NA	NA	False	NA	NA	NA	9621502	9635446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9627715_9627807_9632227_9632418_9633459
transcript_66411.known	chr19	+	2261	3	FSM	ENSG00000267106.9	ENST00000591932.6	2261	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	67	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	5	True	NA	NA	False	NA	NA	NA	9621266	9635446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621351_9632227_9632418_9633459
transcript_66413.known	chr19	+	2337	3	FSM	ENSG00000267106.9	ENST00000585797.6	2341	3	4	0	-1	0	multi-exon	FALSE	canonical	3	90	junction_1	24	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	-20	True	NA	NA	False	NA	NA	NA	9621485	9635446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9632227_9632418_9633459
transcript_66424.nic	chr19	-	931	6	NIC	ENSG00000196605.7	novel	683	6	NA	NA	-94	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	6.30555310817378	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGGAGAACTTTTCT	9939	False	NA	-3	True	AATAAA	-34	NA	9786183	9758473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_9758765_9759859_9759943_9762081_9762166_9763281_9763409_9764935_9765036_9785937
transcript_66426.known	chr19	-	2016	6	FSM	ENSG00000196605.7	ENST00000397902.6	2016	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.43739077577243	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	91	False	NA	NA	False	NA	NA	NA	9768617	9757474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9758765_9759859_9759943_9762081_9762169_9763281_9763409_9764935_9765036_9768288
transcript_6643.known	chr1	-	500	5	FSM	ENSG00000077254.14	ENST00000528150.1	500	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	152.320386028923	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGAACTCAGCCTTCATT	17	True	NA	NA	False	NA	NA	NA	77759811	77739330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77739418_77740876_77740935_77741375_77741430_77741616_77741749_77759642
transcript_66432.known	chr19	-	1621	5	FSM	ENSG00000196605.7	ENST00000586293.5	1621	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	403	False	NA	NA	False	NA	NA	NA	9768305	9757474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9758765_9762081_9762169_9763281_9763409_9764935_9765036_9768288
transcript_66433.known	chr19	-	482	5	FSM	ENSG00000196605.7	ENST00000586814.5	482	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.02336923485777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGAAACTGTATGACTCT	6909	False	NA	NA	False	NA	NA	NA	9786089	9758748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9758765_9762081_9762169_9763281_9763409_9764935_9765036_9785937
transcript_66434.known	chr19	-	650	2	FSM	ENSG00000196605.7	ENST00000589038.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGTCATGACTATAA	2942	False	NA	2	True	AATAAA	-22	NA	9793180	9787407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9787811_9792933
transcript_66439.known	chr19	-	1920	4	FSM	ENSG00000127452.9	ENST00000589626.5	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	108.435336593853	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-7	True	NA	-2	True	ATTAAA	-29	NA	9819079	9810266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818727
transcript_66440.known	chr19	-	879	4	FSM	ENSG00000127452.9	ENST00000592067.1	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	10.4986771653491	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCTCAGCTATCTGCAG	-7	True	NA	NA	False	NA	NA	NA	9819079	9811281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818753
transcript_66442.known	chr19	-	777	4	FSM	ENSG00000127452.9	ENST00000590808.1	777	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	128.222029655161	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGACAGGGCTGGATGCTG	10	True	NA	NA	False	NA	NA	NA	9818816	9811307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9814137_9814343_9818544_9818618_9818727
transcript_66444.known	chr19	-	1873	3	FSM	ENSG00000127452.9	ENST00000247977.9	1873	3	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	2.5	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCAGTTTATTCAT	-7	True	NA	-5	True	ATTAAA	-26	NA	9819079	9810269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9818544_9818618_9818727
transcript_66445.known	chr19	-	1843	3	FSM	ENSG00000127452.9	ENST00000588922.5	1843	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	106.5	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATTCAGTTTATTCA	-4	True	NA	-6	True	ATTAAA	-25	NA	9819076	9810270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9818544_9818618_9818753
transcript_66447.known	chr19	-	544	2	FSM	ENSG00000127452.9	ENST00000586469.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGCCGACCTGAGCAT	-31	True	NA	NA	False	NA	NA	NA	9819103	9811549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9818727
transcript_66448.known	chr19	-	1736	2	FSM	ENSG00000127452.9	ENST00000586651.5	1736	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-3	True	NA	-2	True	ATTAAA	-29	NA	9818829	9810266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9818544
transcript_66453.known	chr19	+	390	5	FSM	ENSG00000198258.11	ENST00000590068.1	390	5	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	1988.22966165883	4115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-25	True	NA	20	True	AATAAA	-14	NA	9827893	9830115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827944_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_66460.known	chr19	+	407	5	FSM	ENSG00000198258.11	ENST00000586895.6	407	5	0	0	0	0	multi-exon	FALSE	canonical	3	3585	junction_1	464.183355474967	55950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-1	True	NA	20	True	AATAAA	-14	NA	9827917	9830115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_66461.known	chr19	+	513	5	FSM	ENSG00000198258.11	ENST00000358666.7	513	5	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	1757.41605418296	9523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-27	True	NA	20	True	AATAAA	-14	NA	9827891	9830115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9828065_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_66462.known	chr19	+	307	3	FSM	ENSG00000198258.11	ENST00000589960.5	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1788	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	-23	True	NA	20	True	AATAAA	-14	NA	9827895	9830115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326_9828394_9829964
transcript_66463.known	chr19	+	320	4	FSM	ENSG00000198258.11	ENST00000593087.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1937.27901965618	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTTGTTGTCTCTGT	-4	True	NA	18	True	AATAAA	-12	NA	9827914	9830113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326_9828390_9828836_9828875_9829964
transcript_66464.known	chr19	+	1450	4	FSM	ENSG00000198258.11	ENST00000589372.1	1450	4	0	0	0	0	multi-exon	FALSE	canonical	3	3585	junction_1	530.014045935472	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTAAAAACTCACCTT	7	True	NA	-19	True	NA	NA	NA	9827925	9830076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836
transcript_66465.known	chr19	-	750	2	FSM	ENSG00000267289.1	ENST00000591174.1	750	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCTCGGTGGCTCACA	NA	False	NA	NA	False	AATAAA	-23	NA	9835013	9834078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9834679_9834863
transcript_66471.known	chr19	+	702	6	FSM	ENSG00000127445.14	ENST00000590540.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	837.596466086146	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	23	True	NA	13	True	ATTAAA	-13	NA	9835339	9849682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089_9849202_9849532
transcript_66474.known	chr19	+	705	6	FSM	ENSG00000127445.14	ENST00000585442.5	705	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	888.590254279215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGAACCCCCCACTC	30	True	NA	NA	False	NA	NA	NA	9835346	9849274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9836822_9836881_9838016_9838099_9838435_9838649_9848029_9848141_9849089
transcript_66475.known	chr19	+	536	5	FSM	ENSG00000127445.14	ENST00000589058.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	886.777311392212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCTCGGGGCAGGGC	52	False	NA	NA	False	NA	NA	NA	9835368	9849214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089
transcript_66477.known	chr19	+	755	5	FSM	ENSG00000127445.14	ENST00000586352.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	909.116707304403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGACCGCCAGATTCTCC	29	True	NA	NA	False	NA	NA	NA	9835345	9849399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9838011_9838076_9838435_9838649_9848029_9848141_9849089
transcript_66479.known	chr19	+	1009	4	FSM	ENSG00000127445.14	ENST00000247970.9	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	1792	junction_3	45.3725320724628	2927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCTCATTTCTC	1	True	NA	20	True	ATTAAA	-20	NA	9835317	9849689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089
transcript_6648.known	chr1	+	6409	16	FSM	ENSG00000180488.16	ENST00000443751.3	6409	16	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_14	7.36538450380487	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTGCTGATGTATTGA	-19	True	NA	2	True	AATAAA	-12	NA	77779623	77879539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873000_77873121_77874845
transcript_66480.known	chr19	+	648	5	FSM	ENSG00000127445.14	ENST00000588695.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	682.261450984885	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	24	True	NA	13	True	ATTAAA	-13	NA	9835340	9849682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089_9849202_9849532
transcript_66484.known	chr19	-	6207	67	FSM	ENSG00000080573.7	ENST00000264828.4	6207	67	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	4.94136881880815	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	-3	True	NA	-2	True	AATAAA	-14	NA	10010504	9959560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9960558_9960650_9960891_9962818_9962888_9966313_9966427_9966535_9966747_9967346_9967401_9967903_9967940_9968025_9968080_9968384_9968493_9968674_9968729_9969348_9969403_9969574_9969683_9969868_9969923_9970621_9970676_9970974_9971029_9971204_9971259_9972918_9973027_9973569_9973624_9973755_9973810_9973918_9973973_9974170_9974225_9974300_9974409_9976557_9976612_9977228_9977283_9977364_9977473_9977593_9977702_9978573_9978628_9978890_9978981_9979131_9979240_9979363_9979418_9979838_9979893_9979993_9980048_9980647_9980693_9980805_9980860_9981087_9981133_9982064_9982119_9985841_9985896_9986314_9986423_9986552_9986607_9986713_9986759_9989123_9989178_9989321_9989367_9989468_9989523_9991609_9991655_9991787_9991842_9992003_9992049_9992826_9992881_9993022_9993068_9993379_9993434_9993618_9993673_9993752_9993807_9995563_9995618_9996065_9996120_9996205_9996263_9996432_9996517_9996614_9996690_9997370_9997434_9997983_9998026_9998101_9998150_10001523_10001671_10001767_10001882_10003564_10003715_10004040_10004146_10005557_10005715_10005795_10005986_10006072_10006232_10010297
transcript_66485.nnic	chr19	-	1461	4	NIC	ENSG00000080573.7	novel	6207	67	NA	NA	2197	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	8.28653526310404	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	1983	False	NA	-2	True	AATAAA	-14	NA	9966690	9959560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_9960558_9960650_9960891_9962818_9962888_9966535
transcript_66487.known	chr19	+	1481	6	FSM	ENSG00000080511.5	ENST00000591589.3	1481	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.748331477354788	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAGTTACATTTACTAT	-3	True	NA	NA	False	ATTAAA	-20	NA	10013482	10022279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10013601_10017056_10017216_10018730_10018911_10020708_10020803_10021254_10021439_10021533
transcript_66490.nnic	chr19	+	652	5	FSM	ENSG00000167798.18	ENST00000688591.1	702	5	40	10	18	0	multi-exon	FALSE	canonical	1	1	junction_4	0.433012701892219	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTGGACATTTGTCCC	17	False	NA	NA	False	AATAAA	-21	NA	10071406	10074135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10071527_10072923_10073011_10073089_10073180_10073299_10073436_10073916
transcript_66494.known	chr19	+	1928	8	FSM	ENSG00000130813.18	ENST00000253110.16	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_6	39.8241030492021	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCAGAGGGGCGTCT	-15	True	NA	15	True	AATAAA	-17	NA	10086316	10093243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
transcript_66496.known	chr19	+	1481	8	FSM	ENSG00000130813.18	ENST00000591813.5	1481	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	66.2635430901272	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCCCTGGCCCCCCAA	8	True	NA	NA	False	AATACA	-33	NA	10086339	10092927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091583_10091631_10092069
transcript_6650.known	chr1	+	1978	15	FSM	ENSG00000180488.16	ENST00000645756.1	1978	15	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_14	9.18433671074436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTCACATTATTCC	-13	True	NA	NA	False	AATAAA	-16	NA	77779629	77868636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77868247
transcript_66501.known	chr19	+	2079	7	FSM	ENSG00000130813.18	ENST00000585919.5	2079	7	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	18.1605494287908	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCGTCTTACCTACCC	137	False	NA	24	True	AATAAA	-26	NA	10086296	10093252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091631_10092069
transcript_66507.known	chr19	+	1461	3	FSM	ENSG00000130813.18	ENST00000592551.5	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-2	True	NA	NA	False	NA	NA	NA	10086121	10088260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10086449_10086928_10087053_10087250
transcript_66508.known	chr19	-	1103	11	FSM	ENSG00000130811.12	ENST00000253108.9	1103	11	0	0	0	0	multi-exon	FALSE	canonical	3	1728	junction_5	136.4	7420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTCTTTTTGTTCTTG	8	True	NA	-5	True	AATAAA	-19	NA	10119899	10115013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116075_10116799_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_66509.known	chr19	+	2302	12	FSM	ENSG00000130810.20	ENST00000253107.12	2302	12	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_7	68.2340406067284	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAATCACTTAAAC	8	True	NA	54	True	NA	NA	NA	10106361	10112012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10106413_10106500_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_66510.known	chr19	+	1575	11	FSM	ENSG00000130810.20	ENST00000393793.5	1575	11	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_6	71.4016806524888	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCAGCCCTTCCACTC	15	False	NA	6	True	CATAAA	-8	NA	10106418	10111254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_66511.known	chr19	+	757	5	FSM	ENSG00000130810.20	ENST00000444703.1	757	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	283.206086622445	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCCACGTCAGCGTTTG	382	False	NA	48	True	AGTAAA	-16	NA	10110145	10111296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10110247_10110323_10110403_10110484_10110615_10110696_10110792_10110944
transcript_66512.known	chr19	-	762	5	FSM	ENSG00000130811.12	ENST00000590940.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	885.416109803747	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTCTTTTAATTTTTT	207	False	NA	70	True	AATAAA	-37	NA	10119700	10118075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653
transcript_66513.known	chr19	-	537	6	FSM	ENSG00000130811.12	ENST00000587681.5	537	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	796.606904313539	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGACCTC	-1	True	NA	NA	False	NA	NA	NA	10119908	10118369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_66514.known	chr19	-	5408	40	FSM	ENSG00000130816.17	ENST00000340748.8	5408	40	0	0	0	0	multi-exon	TRUE	canonical	3	487	junction_32	84.3584288034732	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	6106	False	NA	42	True	AATAAA	-17	NA	10195135	10133345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_66520.nic	chr19	-	847	9	ISM	ENSG00000130816.17	ENST00000359526.9	5274	41	-25	39744	-23	0	5prime_fragment	FALSE	canonical	3	95	junction_4	200.000624999023	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCTCTATCACCTCTA	6263	False	NA	27	True	AAGAAA	-12	NA	10194978	10173089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_66526.known	chr19	-	521	3	FSM	ENSG00000130816.17	ENST00000591798.5	521	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	397	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACCCTGGGTGGGTATT	7382	False	NA	37	True	AATAAA	-12	NA	10135517	10133350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10133702_10134216_10134308_10135438
transcript_66530.known	chr19	+	1218	9	FSM	ENSG00000105364.14	ENST00000253099.11	1218	9	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_8	72.1819532501026	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTCAGTGTCATT	-21	True	NA	18	True	AATAAA	-28	NA	10252213	10260055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
transcript_66532.known	chr19	+	1423	8	FSM	ENSG00000105364.14	ENST00000590669.5	1423	8	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_4	58.4706449984145	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	41	True	NA	NA	False	NA	NA	NA	10252009	10259125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608
transcript_66539.known	chr19	+	2967	7	FSM	ENSG00000090339.9	ENST00000264832.8	2967	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	6.92017983067556	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGTGTGAGTTGAG	4	True	NA	4	True	AATAAA	-16	NA	10271119	10286615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10271227_10274764_10275029_10283480_10283787_10284032_10284321_10284402_10284658_10284782_10285029_10285114
transcript_6654.nnic	chr1	+	720	3	NNC	ENSG00000180488.16	novel	1978	15	NA	NA	-2	-73711	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	11	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTTTGTATCTTTTTT	-15	True	NA	NA	False	TTTAAA	-12	NA	77779627	77788504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_77779737_77783237_77783352_77788007
transcript_66544.known	chr19	+	1290	3	FSM	ENSG00000105371.10	ENST00000380770.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTCCTGTGACCTAA	-1	True	NA	30	True	AATAAA	-15	NA	10286954	10288520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10287407_10287535_10287839_10287985
transcript_66546.known	chr19	+	1176	3	FSM	ENSG00000105371.10	ENST00000340992.4	1176	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCTTCCTTAACCAGC	-20	True	NA	12	True	AATAAA	-41	NA	10286973	10288502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10287407_10287612_10287839_10287985
transcript_6655.nic	chr1	+	331	3	ISM	ENSG00000180488.16	ENST00000645756.1	1978	15	-2	67198	-2	-60777	5prime_fragment	FALSE	canonical	3	27	junction_1	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAAATATTACCATGGGA	-15	True	NA	NA	False	AAGAAA	-17	NA	77779627	77801438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_77779737_77783237_77783352_77801330
transcript_66550.known	chr19	-	1735	7	FSM	ENSG00000076662.10	ENST00000160262.10	1735	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_4	44.4575327950419	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	5	True	NA	-1	True	AATAAA	-18	NA	10339624	10333775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670_10335977_10338681_10338949_10339538
transcript_66552.known	chr19	-	2057	6	FSM	ENSG00000076662.10	ENST00000589900.5	2057	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	45.9103474175485	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	0	True	NA	-1	True	AATAAA	-18	NA	10339629	10333775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335977_10338681_10338949_10339538
transcript_66561.known	chr19	+	2813	1	FSM	ENSG00000274425.1	ENST00000612689.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTTTATGACTATGAT	158	False	NA	11	True	AATAAA	-22	NA	10333435	10336248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10333400_10336200
transcript_66562.known	chr19	-	1012	5	FSM	ENSG00000267673.6	ENST00000393708.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_4	122.427529583832	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTGGTGGTAAGTG	-8	True	NA	NA	False	AGTAAA	-6	NA	10316015	10310044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_66563.known	chr19	-	773	4	FSM	ENSG00000267673.6	ENST00000492239.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	231.357347456748	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	1303	False	NA	-7	True	AATAAA	-13	NA	10315795	10310216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10310643_10310852_10310941_10315385_10315554_10315704
transcript_66564.known	chr19	-	584	2	FSM	ENSG00000267673.6	ENST00000486454.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCACAAAT	1	True	NA	NA	False	NA	NA	NA	10316006	10315330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10315760_10315851
transcript_66565.known	chr19	-	2491	4	FSM	ENSG00000076662.10	ENST00000587992.1	2491	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	43.8710230866191	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	2	True	NA	-1	True	AATAAA	-18	NA	10339661	10333775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10334060_10334159_10335977_10338681_10338949_10339538
transcript_66568.nnic	chr19	-	972	5	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	29.2361078120874	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	297	False	NA	-11	True	AATAAA	-16	NA	10353947	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353813
transcript_66569.nnic	chr19	-	888	5	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.6173513332979	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	293	False	NA	-11	True	AATAAA	-16	NA	10353951	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353901
transcript_66571.nic	chr19	-	1664	4	ISM	ENSG00000105397.14	ENST00000527481.2	628	6	598	-414	154	0	3prime_fragment	FALSE	canonical	3	47	junction_2	16.1107279647928	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10	True	NA	-11	True	AATAAA	-16	NA	10353924	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925
transcript_66574.nnic	chr19	-	783	4	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	147	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	33.1360830515618	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-17	True	NA	-11	True	AATAAA	-16	NA	10353931	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10353813
transcript_66575.nnic	chr19	-	711	4	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	33.9836562024878	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	297	False	NA	-11	True	AATAAA	-16	NA	10353947	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10353901
transcript_66577.nnic	chr19	-	1153	4	NIC	ENSG00000105397.14	novel	3456	21	NA	NA	118	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	30.7354301526214	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	284	False	NA	-11	True	AATAAA	-16	NA	10353960	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_10350969_10351051_10351163_10352925_10353099_10353527
transcript_6658.known	chr1	+	3195	12	FSM	ENSG00000162614.19	ENST00000330010.12	3195	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	8.69501614634061	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTCTGTATTTTA	-5	True	NA	5	True	AATAAA	-16	NA	77888514	77943891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
transcript_66581.nnic	chr19	-	947	3	NIC	ENSG00000105397.14	novel	3456	21	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	37	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	919	False	NA	-11	True	AATAAA	-16	NA	10353325	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_10350969_10351051_10351163_10352925
transcript_66583.nnic	chr19	-	943	3	NIC	ENSG00000105397.14	novel	3456	21	NA	NA	155	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	41.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-9	True	NA	-11	True	AATAAA	-16	NA	10353923	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_10350969_10351051_10351163_10353527
transcript_66584.nnic	chr19	-	660	3	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	152	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	39	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-12	True	NA	-11	True	AATAAA	-16	NA	10353926	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10353813
transcript_66588.known	chr19	-	767	2	FSM	ENSG00000105397.14	ENST00000530220.1	767	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-1	True	NA	-11	True	AATAAA	-16	NA	10353256	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10350969_10352925
transcript_66589.nnic	chr19	-	855	2	NIC	ENSG00000105397.14	novel	3456	21	NA	NA	132	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	298	False	NA	-11	True	AATAAA	-16	NA	10353946	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_10350969_10353527
transcript_66590.nic	chr19	-	732	2	ISM	ENSG00000105397.14	ENST00000530560.5	558	4	2276	-215	185	0	3prime_fragment	FALSE	canonical	3	39	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	NA	False	NA	-11	True	AATAAA	-16	NA	10354337	10350532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_10350969_10354041
transcript_66601.known	chr19	-	1618	8	FSM	ENSG00000105401.9	ENST00000222005.7	1618	8	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_5	125.502093648688	3856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-11	True	NA	-29	True	AATAAA	-16	NA	10403542	10391132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
transcript_66602.known	chr19	-	1377	7	FSM	ENSG00000105401.9	ENST00000591248.5	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_1	69.9795605079718	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCTGCTCGGCCCAGCC	1	True	NA	11	True	AAAACA	-38	NA	10403530	10391452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395544_10395927_10396204_10403377
transcript_66605.known	chr19	-	2648	6	FSM	ENSG00000079999.14	ENST00000393623.6	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_5	105.129253778385	3136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCTCTGGGCTGGAG	827	False	NA	-8	True	AATAAA	-24	NA	10502896	10486125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502696
transcript_66606.known	chr19	-	2565	6	FSM	ENSG00000079999.14	ENST00000171111.10	2565	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	209.645033330151	3368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-9	True	NA	-7	True	AATAAA	-25	NA	10503356	10486124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10503240
transcript_66613.known	chr19	-	3005	19	FSM	ENSG00000129347.21	ENST00000652042.1	3005	19	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	28.2958357534754	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10	True	NA	-11	True	AATAAA	-24	NA	10566026	10553084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_66616.known	chr19	-	2545	18	FSM	ENSG00000129347.21	ENST00000478863.5	2545	18	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	24.6817809612411	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACGTGTAGCTG	3056	False	NA	NA	False	NA	NA	NA	10565971	10553575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_66618.known	chr19	-	3744	17	FSM	ENSG00000129347.21	ENST00000536689.5	3744	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	25.296291106603	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	19	True	NA	-11	True	AATAAA	-24	NA	10565997	10553084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565791_10565905
transcript_66620.nic	chr19	-	1057	11	ISM	ENSG00000129347.21	ENST00000478863.5	2545	18	-69	6044	-9	190	5prime_fragment	FALSE	canonical	3	176	junction_10	18.6504691629996	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGGGTGAGTGTGGGGG	2987	False	NA	-8	True	NA	NA	NA	10566040	10559619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_66623.known	chr19	+	1619	9	FSM	ENSG00000130734.10	ENST00000588667.5	1619	9	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_3	107.713740999002	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGGGTGTGGCTGGGCGC	66	False	NA	30	True	AATAAA	-15	NA	10543970	10553418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10544326_10544782_10544867_10544956_10545131_10547188_10547254_10548903_10549035_10551896_10551976_10552044_10552122_10552204_10552325_10552884
transcript_66627.known	chr19	-	1086	3	FSM	ENSG00000129355.7	ENST00000335766.2	1086	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGTTGGAAGCTTGT	8322	False	NA	NA	False	NA	NA	NA	10569059	10566600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10567418_10568512_10568669_10568946
transcript_66636.known	chr19	-	1757	12	FSM	ENSG00000129354.12	ENST00000590923.5	1757	12	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_6	269.205841548743	5204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-36	True	NA	-10	True	ATTAAA	-13	NA	10587315	10572670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579865_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
transcript_66637.known	chr19	-	510	3	FSM	ENSG00000129354.12	ENST00000589348.1	510	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	483.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAAAGATGAATCTAGC	5	True	NA	-28	True	NA	NA	NA	10577231	10572688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10573089_10574416_10574493_10577197
transcript_6664.nic	chr1	+	1765	10	ISM	ENSG00000162614.19	ENST00000330010.12	3195	12	-261	7921	-259	0	5prime_fragment	FALSE	canonical	3	36	junction_7	6.0736223860962	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAAGAAGAGCGAGCAAGA	35	False	NA	NA	False	AATACA	-9	NA	77888253	77935970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822
transcript_66641.known	chr19	+	3301	22	FSM	ENSG00000129353.15	ENST00000407327.8	3301	22	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_1	161.216309388034	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	30	True	NA	18	True	AATAAA	-12	NA	10602509	10644550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_66645.known	chr19	+	3374	22	FSM	ENSG00000129353.15	ENST00000335757.10	3374	22	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	119.205932829573	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	13	True	NA	25	True	AATAAA	-19	NA	10625552	10644557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_66646.known	chr19	+	3784	22	FSM	ENSG00000129353.15	ENST00000586078.5	3784	22	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_21	179.389301637389	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	-15	True	NA	25	True	AATAAA	-19	NA	10625524	10644557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
transcript_66647.nnic	chr19	-	1583	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-50	0	multi-exon	FALSE	canonical	2	11	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTGGTCCTTTGTTT	NA	False	NA	-3	True	AATAAA	-21	NA	10653894	10651861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_10653269_10653718
transcript_66648.nnic	chr19	-	1083	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-50	-500	multi-exon	FALSE	canonical	2	11	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGTGT	NA	False	NA	NA	False	NA	NA	NA	10653894	10652361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_10653269_10653718
transcript_66649.nnic	chr19	-	899	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-50	-684	multi-exon	FALSE	canonical	2	11	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTCGCCAGGTGTG	NA	False	NA	NA	False	NA	NA	NA	10653894	10652545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_10653269_10653718
transcript_6665.nic	chr1	+	1903	10	ISM	ENSG00000162614.19	ENST00000330010.12	3195	12	-261	7783	-259	138	5prime_fragment	FALSE	canonical	3	36	junction_7	6.0736223860962	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGCTTTGAAATAAGTT	35	False	NA	NA	False	AATAAA	-15	NA	77888253	77936108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822
transcript_66650.known	chr19	-	1983	1	FSM	ENSG00000267100.1	ENST00000591501.1	1983	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	621	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTGGTCCTTTGTTT	14	True	NA	-3	True	AATAAA	-21	NA	10653844	10651861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10651900_10653800
transcript_66651.known	chr19	+	6119	20	FSM	ENSG00000129351.17	ENST00000449870.5	6119	20	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_18	443.170021086747	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCGTTCGTTCATTTT	NA	False	NA	34	True	AATAAA	-35	NA	10654260	10692417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_66657.known	chr19	+	3671	18	FSM	ENSG00000129351.17	ENST00000407004.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_13	258.947162985025	2537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	-27	True	NA	40	True	AATACA	-15	NA	10654327	10685765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_66660.known	chr19	+	2622	18	FSM	ENSG00000129351.17	ENST00000589998.5	2622	18	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_13	202.490958403812	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAAAGCCCACCTTTG	6	True	NA	-66	True	NA	NA	NA	10654360	10684761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_66673.nic	chr19	+	1430	11	ISM	ENSG00000129351.17	ENST00000589998.5	2622	18	-56	3455	1	0	5prime_fragment	FALSE	canonical	3	1124	junction_1	158.532804176297	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	7	True	NA	1	True	NA	NA	NA	10654304	10681306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_66675.nic	chr19	+	1544	11	NIC	ENSG00000129351.17	novel	3866	16	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	3	472	junction_1	345.163743750701	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	299	False	NA	1	True	NA	NA	NA	10654826	10681306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_6668.known	chr1	+	1263	9	FSM	ENSG00000162614.19	ENST00000401035.7	1263	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	6.44083651399413	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAGAAAAACGACGA	-7	True	NA	NA	False	ATTAAA	-9	NA	77888512	77933384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281
transcript_66689.known	chr19	+	3859	3	FSM	ENSG00000129351.17	ENST00000586544.1	3859	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	295	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTGTTTCATTCACTCA	6580	False	NA	15	True	AATAAA	-16	NA	10687604	10692398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10688115_10688549_10688679_10689178
transcript_66690.known	chr19	+	953	8	FSM	ENSG00000129351.17	ENST00000590009.5	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_1	403.110356085866	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATCCATTGGCACG	-14	True	NA	NA	False	NA	NA	NA	10655023	10679831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815
transcript_66691.known	chr19	+	773	7	FSM	ENSG00000129351.17	ENST00000589416.5	773	7	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	727.407191483712	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGATTCAGAAGAAAGGT	3395	False	NA	6	True	AAAAAG	-5	NA	10671169	10681311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10671204_10671357_10671536_10677162_10677311_10679096_10679193_10679815_10679928_10681018_10681131_10681218
transcript_66692.known	chr19	+	1329	10	FSM	ENSG00000213339.9	ENST00000250237.10	1329	10	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_6	37.9749755158854	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTGTCTGTGTCTTC	-8	True	NA	26	True	NA	NA	NA	10701438	10713365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712552_10712629_10712757_10712868_10712952_10713041_10713117
transcript_66693.known	chr19	+	1571	9	FSM	ENSG00000213339.9	ENST00000589488.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_5	29.5074143225055	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATTGTAACTTA	NA	False	NA	6	True	GGGGCT	-31	NA	10701429	10713345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
transcript_66694.known	chr19	+	540	3	FSM	ENSG00000213339.9	ENST00000587500.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	8	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTGTGTCTGTGTCTT	NA	False	NA	25	True	NA	NA	NA	10712662	10713364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10712868_10712952_10713041_10713117
transcript_66697.known	chr19	-	541	4	FSM	ENSG00000099203.7	ENST00000588289.1	541	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	126.129563016236	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGAACGGGACAAA	2950	False	NA	NA	False	NA	NA	NA	10835632	10832984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10835602
transcript_66699.known	chr19	-	1633	4	FSM	ENSG00000099203.7	ENST00000214869.7	1633	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	8.80656320908194	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTGGCTTCCTCTGAAA	-5	True	NA	NA	False	AGTAAA	-15	NA	10836212	10832066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10836008
transcript_66700.known	chr19	+	1060	8	FSM	ENSG00000214212.9	ENST00000592854.5	1060	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.03015750727543	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGGAAAGGAAGGGGAA	NA	False	NA	NA	False	GGGGCT	-28	NA	10836574	10869470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10836771_10848440_10848540_10850258_10850568_10856264_10856358_10858315_10858344_10859914_10859959_10863169_10863208_10869217
transcript_66703.known	chr19	-	2111	10	FSM	ENSG00000130733.11	ENST00000586748.6	2111	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	32.4379750018743	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACGTCCGTTGTGA	-2	True	NA	-19	True	AATAAA	-14	NA	10928639	10922192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_66704.known	chr19	-	2087	10	FSM	ENSG00000130733.11	ENST00000253031.6	2087	10	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_9	88.7311099701971	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	17	False	NA	-11	True	AATAAA	-22	NA	10928681	10922184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928584
transcript_6671.nic	chr1	+	1327	8	ISM	ENSG00000162614.19	ENST00000401035.7	1263	9	-259	3972	-259	-3972	5prime_fragment	FALSE	canonical	3	36	junction_7	5.68205194324324	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAGATGAAAAAAGG	35	False	NA	19	True	AAGAAA	-13	NA	77888253	77929412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315
transcript_66719.known	chr19	+	859	2	FSM	ENSG00000142444.7	ENST00000588807.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGGTGGTAAAACAACTA	774	False	NA	-14	True	AATAAA	-1	NA	10929620	10933515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10930325_10933360
transcript_66720.known	chr19	+	5173	18	FSM	ENSG00000130164.14	ENST00000558518.6	5173	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_4	36.0341053365398	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTAAACTCGATGCAC	0	True	NA	19	True	ATTAAA	-18	NA	11089462	11133820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_66731.nnic	chr19	-	784	5	NNC	ENSG00000161888.12	novel	2290	5	NA	NA	-8	14	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	12.3970762682174	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCATGCCTGTGA	9101	False	NA	-25	True	ATTAAA	-15	NA	11155815	11145908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_11146167_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_66733.known	chr19	-	833	5	FSM	ENSG00000161888.12	ENST00000592967.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.6484977572217	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAGAAGGCAGAGG	9151	False	NA	NA	False	AAAAAG	-40	NA	11155765	11146021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11146431_11147869_11147895_11148012_11148118_11149093_11149239_11155616
transcript_66735.known	chr19	-	832	5	FSM	ENSG00000161888.12	ENST00000591396.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.3970762682174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGGCCTGGTGTGGTG	9152	False	NA	-39	True	ATTAAA	-1	NA	11155764	11145922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11146280_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_66736.known	chr19	-	2315	5	FSM	ENSG00000161888.12	ENST00000592540.6	2290	5	-26	1	-1	-1	multi-exon	FALSE	canonical	3	8	junction_1	9.86154146165801	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGGCCGGCCAATCA	9108	False	NA	-15	True	AATAAA	-22	NA	11155808	11145493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11147290_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_66739.known	chr19	-	699	4	FSM	ENSG00000161888.12	ENST00000585486.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	6.97614984548545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGGCCAAGTGTGGTAC	9147	False	NA	NA	False	AATAAA	-13	NA	11155769	11147598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11147895_11148012_11148118_11149093_11149239_11155616
transcript_66742.known	chr19	-	378	3	FSM	ENSG00000161888.12	ENST00000586708.1	378	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATCCATTTCAAATGAAA	9155	False	NA	NA	False	NA	NA	NA	11155761	11147133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11147290_11147817_11147895_11155616
transcript_66743.nic	chr19	-	511	3	ISM	ENSG00000161888.12	ENST00000585486.1	699	4	-46	352	-8	-352	5prime_fragment	FALSE	canonical	3	27	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGCTGGGTAACTTTC	9101	False	NA	NA	False	NA	NA	NA	11155815	11147950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11148118_11149093_11149239_11155616
transcript_66744.nic	chr19	-	716	2	ISM	ENSG00000161888.12	ENST00000585567.5	633	6	17944	-101	17923	101	3prime_fragment	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGGCAGGCAATGCTTT	8624	False	NA	NA	False	AATAAA	-14	NA	11137838	11131418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11131608_11137311
transcript_66748.known	chr19	+	1881	3	FSM	ENSG00000130164.14	ENST00000557958.1	1881	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	30.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCGTCTCAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	11089462	11104268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11089616_11100222_11100346_11102663
transcript_66752.known	chr19	+	1049	11	FSM	ENSG00000183401.12	ENST00000458408.6	1049	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.4621977685614	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTGTTAGTCTTGC	-5	True	NA	8	True	AATAAA	-21	NA	11346518	11354944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11346628_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
transcript_66772.known	chr19	+	954	5	FSM	ENSG00000183401.12	ENST00000589016.5	954	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.2555541844904	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGACAGGTGGCTGGTG	-5	True	NA	NA	False	NA	NA	NA	11346564	11351486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11346635_11349653_11349688_11349937_11350027_11350117_11350200_11350807
transcript_66773.known	chr19	-	4240	5	FSM	ENSG00000105514.8	ENST00000222120.8	4240	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	24.2009813850596	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTGTGCTTTTATTTC	-34	True	NA	-27	True	AAGAAA	-24	NA	11339657	11322067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11325586_11335446_11335572_11335664_11335784_11337171_11337461_11339468
transcript_66788.known	chr19	-	628	4	FSM	ENSG00000105518.14	ENST00000591677.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	340.165972561761	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGCACCACAGCTGCCAT	185	False	NA	NA	False	NA	NA	NA	11346305	11343063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346007
transcript_66790.known	chr19	-	688	4	FSM	ENSG00000105518.14	ENST00000587948.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	349.586422314521	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	84	False	NA	-5	True	AATAAA	-14	NA	11346406	11342778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346333
transcript_66791.known	chr19	-	1003	4	FSM	ENSG00000105518.14	ENST00000586956.5	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	346.760243780435	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-3	True	NA	-4	True	AATAAA	-15	NA	11346285	11342777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346007
transcript_66793.known	chr19	-	788	4	FSM	ENSG00000105518.14	ENST00000589555.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	342.992063400242	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	11	True	NA	-5	True	AATAAA	-14	NA	11346271	11342778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346207
transcript_66800.known	chr19	-	593	3	FSM	ENSG00000105518.14	ENST00000586218.5	593	3	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_2	355.5	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-2	True	NA	-2	True	AATAAA	-17	NA	11346210	11342775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11346126
transcript_66804.known	chr19	-	792	4	FSM	ENSG00000105518.14	ENST00000593256.6	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	134.127634073752	6678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-18	True	NA	-2	True	AATAAA	-17	NA	11346300	11342775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346126
transcript_66805.known	chr19	-	840	4	FSM	ENSG00000105518.14	ENST00000588560.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	289.304145993259	2186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATGGCTGCTGTCTT	-7	True	NA	-11	True	AATAAA	-8	NA	11346248	11342784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346126
transcript_66806.known	chr19	-	677	4	FSM	ENSG00000105518.14	ENST00000586590.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	310.494587535578	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	14	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346207
transcript_66807.known	chr19	-	1310	2	FSM	ENSG00000105518.14	ENST00000588321.1	1310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGCATGCTAATAAATG	234	False	NA	-36	True	NA	NA	NA	11346256	11342809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343101_11345237
transcript_66808.known	chr19	-	1256	3	FSM	ENSG00000105518.14	ENST00000354882.10	1256	3	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_1	17	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	14	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519
transcript_66809.known	chr19	-	1147	2	FSM	ENSG00000105518.14	ENST00000585722.1	1147	2	0	0	0	0	multi-exon	FALSE	canonical	3	724	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	435	False	NA	-4	True	AATAAA	-15	NA	11346055	11342777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251
transcript_66819.known	chr19	-	682	3	FSM	ENSG00000267277.2	ENST00000590399.2	687	3	0	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_2	3.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACAGACGGGGGTCTCA	-14	True	NA	NA	False	AATATA	-16	NA	11374935	11368122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11368296_11371687_11371872_11374610
transcript_66824.known	chr19	+	1662	2	FSM	ENSG00000173928.4	ENST00000312423.4	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32	False	NA	NA	False	NA	NA	NA	11374706	11376951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11374930_11375512
transcript_66825.nnic	chr19	+	877	2	NNC	ENSG00000173928.4	novel	921	2	NA	NA	500	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATATGTTGTTTATAGTT	-14	True	NA	17	True	TTTAAA	-34	NA	11375206	11376165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11375431_11375512
transcript_66827.known	chr19	-	2278	19	FSM	ENSG00000205517.13	ENST00000393423.7	2278	19	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_4	43.745475956568	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGAGGCCACTGTGCTG	3	True	NA	NA	False	NA	NA	NA	11419328	11394324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399970_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_66840.nic	chr19	-	1466	3	ISM	ENSG00000187266.14	ENST00000588681.5	2133	8	3117	-203	13	65	intron_retention	FALSE	canonical	3	121	junction_2	6.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGCTCAAATGGGCAGCC	-3	True	NA	-8	True	ATTAAA	-18	NA	11381225	11377559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11378596_11378690_11378779_11380883
transcript_66841.nic	chr19	-	1263	3	ISM	ENSG00000187266.14	ENST00000588681.5	2133	8	3117	0	13	0	intron_retention	FALSE	canonical	3	121	junction_2	6.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCTACCATGATTTCT	-3	True	NA	NA	False	NA	NA	NA	11381225	11377762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11378596_11378690_11378779_11380883
transcript_66846.known	chr19	-	771	3	FSM	ENSG00000205517.13	ENST00000568420.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	11	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGCCGAGGCAGG	8	True	NA	NA	False	NA	NA	NA	11419305	11416462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11417060_11418670_11418785_11419245
transcript_66850.known	chr19	-	878	2	FSM	ENSG00000187266.14	ENST00000590927.1	878	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCTGCCAGCTTTGAG	3106	False	NA	NA	False	NA	NA	NA	11381238	11378255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11378779_11380883
transcript_66855.nic	chr19	-	913	2	NIC	ENSG00000205517.13	novel	557	4	NA	NA	-3	-178	intron_retention	FALSE	canonical	3	49	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCAGGAGTCATATTCT	-13	True	NA	NA	False	NA	NA	NA	11418576	11416216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_11417060_11418506
transcript_66857.nic	chr19	-	1529	2	ISM	ENSG00000205517.13	ENST00000568420.1	771	3	-55	-242	-32	-182	intron_retention	FALSE	canonical	3	92	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTACCAGGAGTCATA	2493	False	NA	NA	False	NA	NA	NA	11419360	11416220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11417060_11418670
transcript_66859.known	chr19	-	2411	8	FSM	ENSG00000187266.14	ENST00000222139.11	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	18.5736262435943	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGTTCTAAGAAAGTAC	-1	True	NA	-29	True	AATAAA	-17	NA	11384314	11377206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_66860.known	chr19	-	2086	7	FSM	ENSG00000187266.14	ENST00000592375.6	2086	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_6	15.0268278607148	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTATGTTAAACAGCTC	1	True	NA	-30	True	NA	NA	NA	11384312	11377624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_66877.known	chr19	-	467	3	FSM	ENSG00000198003.12	ENST00000593281.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTGTATCTGGCATC	279	False	NA	NA	False	ATTAAA	-14	NA	11434899	11430558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11430777_11430898_11431021_11434772
transcript_66878.known	chr19	+	2063	18	FSM	ENSG00000130175.10	ENST00000591462.6	2063	18	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	236.682331304128	2524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	-9	True	NA	25	True	AATAAA	-16	NA	11435634	11450965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_66879.known	chr19	+	2096	18	FSM	ENSG00000130175.10	ENST00000677123.1	2096	18	0	0	0	0	multi-exon	TRUE	canonical	3	348	junction_11	200.409805063021	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	-9	True	NA	28	True	AATAAA	-19	NA	11435634	11450968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_6688.nic	chr1	+	724	3	ISM	ENSG00000162614.19	ENST00000440324.5	1456	10	-408	18215	-259	-15680	5prime_fragment	FALSE	canonical	3	7	junction_2	23	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAGAACAATATATT	35	False	NA	NA	False	AAGAAA	-34	NA	77888253	77917704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_77888760_77916054_77916134_77917565
transcript_66880.known	chr19	+	1898	17	FSM	ENSG00000130175.10	ENST00000589838.5	1898	17	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_10	162.2985169179	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAAATGTGATCCCC	62	False	NA	0	True	NA	NA	NA	11436117	11450940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_66881.known	chr19	+	1613	8	FSM	ENSG00000130175.10	ENST00000586486.1	1613	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	455.396216810937	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	475	False	NA	28	True	AATAAA	-19	NA	11447564	11450968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449883_11450428
transcript_66885.nic	chr19	-	1590	7	FSM	ENSG00000130159.15	ENST00000585318.6	1510	7	-64	-16	-24	0	multi-exon	FALSE	canonical	3	20	junction_6	98.2847337529532	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	6921	False	NA	-13	True	AATAAA	-31	NA	11529196	11505928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11529061
transcript_66888.known	chr19	-	1286	6	FSM	ENSG00000130159.15	ENST00000592312.5	1286	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	104.91787264332	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGTCCACCCGGGAGCT	13	True	NA	NA	False	NA	NA	NA	11529124	11506300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11508049_11513055_11513280_11513803_11514222_11529061
transcript_6689.known	chr1	+	3282	13	FSM	ENSG00000162614.19	ENST00000334785.12	3282	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	15.6478166741136	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCTGTATTTTAAGAC	0	True	NA	9	True	AATAAA	-20	NA	77888623	77943895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77888760_77916054_77916134_77917565_77917758_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
transcript_66896.known	chr19	+	396	1	FSM	ENSG00000213303.3	ENST00000463278.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAAATCTTTGGCTCA	45	False	NA	NA	False	AAGAAA	-4	NA	11523435	11523831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11523400_11523800
transcript_66897.known	chr19	-	1647	8	FSM	ENSG00000130159.15	ENST00000270517.12	1647	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	31.5588210120953	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	3	True	NA	-13	True	AATAAA	-31	NA	11529134	11505928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_66898.known	chr19	-	818	5	FSM	ENSG00000130159.15	ENST00000588998.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	143.012237238636	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	6	True	NA	-13	True	AATAAA	-31	NA	11529096	11505928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11519074_11519194_11529061
transcript_66899.known	chr19	-	1501	7	FSM	ENSG00000130159.15	ENST00000252440.11	1501	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	102.335640582025	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	0	True	NA	-13	True	AATAAA	-31	NA	11529137	11505928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_66900.known	chr19	-	970	6	FSM	ENSG00000130159.15	ENST00000417981.6	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	104.803435058208	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATCTGCAGGCGCCT	6945	False	NA	-86	True	NA	NA	NA	11529172	11506001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11519074_11519194_11529061
transcript_66902.known	chr19	+	1499	7	FSM	ENSG00000130176.8	ENST00000252456.7	1499	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	12.5565388012249	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	-1	True	NA	16	True	AATAAA	-16	NA	11538850	11550323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11538991_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_66903.nic	chr19	+	1512	7	NIC	ENSG00000130176.8	novel	565	5	NA	NA	-25	0	intron_retention	FALSE	canonical	3	24	junction_1	37.5396087116291	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	1017	False	NA	16	True	AATAAA	-16	NA	11539868	11550323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_11540022_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_66908.known	chr19	-	585	5	FSM	ENSG00000130165.10	ENST00000590700.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	364.158619285607	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTAGTGGGTGTGCG	10	True	NA	NA	False	NA	NA	NA	11559223	11553590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11554819_11554947_11559190
transcript_66913.known	chr19	-	679	4	FSM	ENSG00000130165.10	ENST00000591674.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_3	329.800950069381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTGTCACTGGGGTGGCC	3627	False	NA	NA	False	NA	NA	NA	11555715	11553530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11555521
transcript_66914.known	chr19	-	743	4	FSM	ENSG00000130165.10	ENST00000589171.5	743	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	360.871476044065	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTGATCTCACTTGGC	9290	False	NA	NA	False	NA	NA	NA	11559145	11553456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11553816_11554010_11554082_11554231_11554366_11558966
transcript_66916.known	chr19	-	1019	4	FSM	ENSG00000130165.10	ENST00000252445.7	1019	4	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_3	78.661016746261	8614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCCGTGATGTCTT	-3	True	NA	-13	True	AATAAA	-18	NA	11559236	11553042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11559190
transcript_66917.known	chr19	-	1630	7	FSM	ENSG00000102575.13	ENST00000218758.9	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	8.09835374217089	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1751	False	NA	-6	True	AATAAA	-22	NA	11578985	11574659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578658_11578843
transcript_66918.nic	chr19	-	1640	6	ISM	ENSG00000102575.13	ENST00000218758.9	1630	7	176	0	114	0	3prime_fragment	FALSE	canonical	3	18	junction_2	6.41872261435249	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	1927	False	NA	-6	True	AATAAA	-22	NA	11578809	11574659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584
transcript_66919.known	chr19	-	1527	6	FSM	ENSG00000102575.13	ENST00000412435.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	9.55824251627882	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATAAAAGAATAGTTG	1750	False	NA	-37	True	NA	NA	NA	11578986	11574690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578843
transcript_66920.nnic	chr19	+	767	5	NNC	ENSG00000198551.10	novel	588	5	NA	NA	0	8097	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGTTTCTAAATTTCTAA	-22	True	NA	NA	False	AATAAA	-14	NA	11559373	11583664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11559617_11564060_11564185_11564444_11564493_11575249_11575354_11583416
transcript_66921.known	chr19	+	591	5	FSM	ENSG00000198551.10	ENST00000587939.5	591	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	33.2302572966265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACAAGAAAACTCCTGG	-8	True	NA	NA	False	AAGAAA	-27	NA	11597461	11616773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11597631_11604209_11604365_11614526_11614654_11614826_11614888_11616694
transcript_66926.nnic	chr19	+	502	3	NNC	ENSG00000198551.10	novel	2755	4	NA	NA	0	-5818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGATTTCTGTTTCCTTG	13	True	NA	NA	False	AATAAA	-15	NA	11597482	11598460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11597631_11597971_11598104_11598238
transcript_66927.nnic	chr19	+	692	2	NNC	ENSG00000198551.10	novel	2755	4	NA	NA	-42	-5826	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCGACTTAGATTTCTG	0	True	NA	NA	False	AATAAA	-7	NA	11597419	11598452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11597631_11597971
transcript_66928.nnic	chr19	+	374	2	NNC	ENSG00000198551.10	novel	2755	4	NA	NA	-36	-5242	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTCTTTGGGTTGGGGT	6	False	NA	NA	False	AATAAA	-13	NA	11597425	11599036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11597631_11598867
transcript_66929.known	chr19	+	2755	4	FSM	ENSG00000198551.10	ENST00000588174.1	2755	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.5095342982992	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCACAAACCATAAAGGACT	13	True	NA	3	True	AATAAA	-18	NA	11597482	11619124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616705
transcript_66936.nic	chr19	+	1237	4	ISM	ENSG00000197332.9	ENST00000666937.1	923	5	-24	25960	-24	-25960	5prime_fragment	FALSE	canonical	3	4	junction_3	3.09120616516523	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGGAGAGAAGCCCTATG	-10	True	NA	NA	False	ATTAAA	-18	NA	11639729	11652534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_11639897_11648357_11648485_11650356_11650418_11651652
transcript_6694.known	chr1	-	6714	20	FSM	ENSG00000162613.17	ENST00000370768.7	6714	20	0	0	0	0	multi-exon	TRUE	canonical	3	233	junction_16	166.31513990546	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-1	True	NA	NA	False	AATAAA	-20	NA	77979072	77944054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_66944.nnic	chr19	-	1850	2	Genic_Genomic	ENSG00000214223.4	novel	962	1	NA	NA	-27960	358	multi-exon	FALSE	canonical	2	4	junction_1	0	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGTACAATATACCTAT	NA	False	NA	NA	False	AATAAA	-38	NA	11694990	11665710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_11667369_11694798
transcript_66945.nnic	chr19	-	462	2	Antisense	novelGene_ENSG00000267343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCCTTCCCATACAAAT	NA	False	NA	NA	False	AATAAA	-22	NA	11694980	11676258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_11676539_11694798
transcript_66947.known	chr19	-	962	1	FSM	ENSG00000214223.4	ENST00000444945.1	962	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1257	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAACAAAGCTTAGCA	57	False	NA	NA	False	NA	NA	NA	11667030	11666068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11666100_11667000
transcript_66948.known	chr19	+	923	5	FSM	ENSG00000197332.9	ENST00000666937.1	923	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.93700393700591	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTTCTATTCTTTCA	-28	True	NA	NA	False	ACTAAA	-45	NA	11639753	11678494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11639897_11648357_11648485_11650356_11650418_11651652_11652054_11678303
transcript_66950.known	chr19	-	2396	4	FSM	ENSG00000197933.13	ENST00000341191.11	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.88561808316413	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCTTTTGTTTTGTG	-10	True	NA	-3	True	ATTAAA	-18	NA	11738946	11721264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11723343_11724193_11724255_11725200_11725328_11738816
transcript_66951.known	chr19	+	2888	3	FSM	ENSG00000177599.13	ENST00000323169.10	2888	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATACTGTTACCAAATTA	-24	True	NA	NA	False	ATTAAA	-31	NA	11798522	11808503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11798728_11804541_11804668_11805946
transcript_66952.known	chr19	+	436	3	FSM	ENSG00000177599.13	ENST00000479762.1	436	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAAAGTTTACTCAA	NA	False	NA	NA	False	AATAAA	-15	NA	11797666	11799279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11797800_11798606_11798728_11799097
transcript_66953.known	chr19	+	512	3	FSM	ENSG00000177599.13	ENST00000492230.1	512	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGTATAATACTTTT	41	False	NA	NA	False	TATAAA	-16	NA	11798587	11809622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11798728_11804541_11804668_11809376
transcript_66954.known	chr19	+	920	4	FSM	ENSG00000171295.13	ENST00000427505.5	920	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.55902608401044	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCGTAGACATGAAAG	66	False	NA	NA	False	NA	NA	NA	11814343	11831983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11814451_11830273_11830410_11830616_11830678_11831367
transcript_66957.known	chr19	+	1438	5	FSM	ENSG00000198429.10	ENST00000340180.5	1438	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	5.71729831301464	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGACTTGTGGTGAG	53	False	NA	NA	False	NA	NA	NA	11887854	11914329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648_11904888_11913408
transcript_66958.known	chr19	+	2441	4	FSM	ENSG00000198429.10	ENST00000429654.7	2441	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.98887651569859	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAAAACCACAAAGAT	-20	True	NA	NA	False	NA	NA	NA	11887781	11906696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648
transcript_66960.known	chr19	+	569	4	FSM	ENSG00000198429.10	ENST00000445911.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.10960933531265	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAAGCCTTCAGATAT	16	True	NA	NA	False	NA	NA	NA	11887817	11904902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648
transcript_66964.known	chr19	+	2843	4	FSM	ENSG00000196757.8	ENST00000254321.10	2843	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3.68178700572909	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	-2	True	NA	23	True	AATAAA	-25	NA	11925106	11950763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11925274_11947180_11947308_11947513_11947575_11948275
transcript_66965.known	chr19	+	2621	4	FSM	ENSG00000197054.12	ENST00000343949.9	2621	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.85861230093008	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	6	True	NA	NA	False	NA	NA	NA	11965053	11980381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11965212_11977028_11977165_11977370_11977432_11978115
transcript_66968.nnic	chr19	+	2782	3	NIC	ENSG00000196757.8	novel	2843	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	11	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	-2	True	NA	23	True	AATAAA	-25	NA	11925106	11950763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_11925274_11947180_11947308_11948275
transcript_66969.known	chr19	+	582	3	FSM	ENSG00000197054.12	ENST00000592625.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTTAGAACACAAGAAAG	-11	True	NA	NA	False	AAGAAA	-19	NA	11965036	11978395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11965212_11977037_11977165_11978115
transcript_66987.known	chr19	-	2338	5	FSM	ENSG00000197647.13	ENST00000419886.7	2338	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	11.5974135047432	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	11	True	NA	-4	True	AATAAA	-29	NA	12035688	12014715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12034827_12034875_12035536
transcript_66989.known	chr19	-	2383	5	FSM	ENSG00000197647.13	ENST00000550745.3	2383	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.2923850380584	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-13	True	NA	-4	True	AATAAA	-29	NA	12035712	12014715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018302_12030139_12030199_12035536
transcript_66999.nnic	chr19	+	816	4	NNC	ENSG00000219665.8	novel	622	3	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	50.3388517946129	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	NA	False	NA	5	True	AATAAA	-20	NA	11987603	12003811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11987824_12001129_12001257_12001773_12001823_12003391
transcript_67.known	ERCC-00157	+	1003	1	FSM	ERCC-00157A	DQ839618	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00157_+_0_1000
transcript_670.known	chr1	+	5441	3	FSM	ENSG00000228794.11	ENST00000669922.1	5441	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	40.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGCCACTATATATT	767	False	NA	NA	False	NA	NA	NA	827602	846365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_827776_829002_829105_841199
transcript_6700.known	chr1	-	639	4	FSM	ENSG00000162613.17	ENST00000474632.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	43.2974210163454	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	1742	False	NA	NA	False	AATAAA	-20	NA	77947692	77944054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77944270_77945505_77945643_77946529_77946577_77947452
transcript_67001.known	chr19	+	523	4	FSM	ENSG00000219665.8	ENST00000589551.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	49.7348525237137	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGAATCGCTTGAAC	75	False	NA	NA	False	NA	NA	NA	11987766	12003595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_11990168_11990382_12001773_12001823_12003391
transcript_67005.known	chr19	+	6588	4	FSM	ENSG00000223547.10	ENST00000439326.8	6588	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.78423336480244	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCCAAGTTATTGG	1	True	NA	13	True	ATTAAA	-22	NA	12064730	12081565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12064877_12074030_12074158_12074360_12074422_12075311
transcript_67007.known	chr19	+	686	4	FSM	ENSG00000214189.9	ENST00000596883.2	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	36.8510515453766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCGCCTCAGAACTTCA	85	False	NA	NA	False	NA	NA	NA	12092386	12111660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12092471_12093835_12093896_12110304_12110432_12111245
transcript_67012.known	chr19	+	1994	4	FSM	ENSG00000214189.9	ENST00000430298.7	1994	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	41.4835978296108	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAATGTAAACAGTGT	166	False	NA	NA	False	NA	NA	NA	12092467	12113048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12092471_12110304_12110432_12110633_12110695_12111245
transcript_6702.known	chr1	-	2524	20	FSM	ENSG00000162613.17	ENST00000370767.5	2524	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	243.360328129873	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	410	False	NA	-24	True	AATAAA	-15	NA	77979092	77948404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77948915_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_67020.known	chr19	-	2282	4	FSM	ENSG00000197647.13	ENST00000550507.7	2283	4	0	1	0	0	multi-exon	FALSE	canonical	2	5	junction_3	10.6770782520313	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	20	True	NA	-4	True	AATAAA	-29	NA	12035679	12014715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12035536
transcript_67022.known	chr19	-	1756	4	FSM	ENSG00000257446.4	ENST00000547628.2	1756	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.69967317119759	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATGGATGTAAGCA	7	True	NA	NA	False	NA	NA	NA	12052961	12043804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12045210_12046367_12046429_12046633_12046761_12052798
transcript_6703.known	chr1	-	802	9	FSM	ENSG00000162613.17	ENST00000421641.1	802	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	337.711322729932	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTATTTTTGTGAAA	-5	True	NA	NA	False	ATTAAA	-10	NA	77979110	77965068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969021_77969085_77969924_77970016_77978884
transcript_67031.nic	chr19	-	626	4	Fusion	ENSG00000213297.8_ENSG00000132010.16	novel	436	4	NA	NA	-38	0	multi-exon	FALSE	canonical	3	8	junction_1	17.7451088722749	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTCTTTCTTTCTCTGG	3545	False	NA	-2	True	AGTAAA	-27	NA	12140393	12130484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_12130700_12135499_12135561_12135768_12135905_12140179
transcript_67032.known	chr19	-	642	4	FSM	ENSG00000132010.16	ENST00000418866.1	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	9.46337971105226	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGTACAGAAACCT	3623	False	NA	NA	False	GATAAA	-30	NA	12140315	12133667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12140179
transcript_67033.known	chr19	-	3004	4	FSM	ENSG00000132010.16	ENST00000334213.10	3004	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	3.39934634239519	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTATGTTTGCAATT	-3	True	NA	NA	False	ATTAAA	-31	NA	12140350	12131349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179
transcript_67034.nnic	chr19	-	1049	4	NIC	ENSG00000257591.6	novel	695	4	NA	NA	-35	0	intron_retention	FALSE	canonical	3	18	junction_1	10.0332779621949	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTCTTTTAGATTA	1	True	NA	-4	True	AATAAA	-15	NA	12156769	12142089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12142737_12147394_12147456_12147675_12147803_12156555
transcript_67044.known	chr19	+	546	3	FSM	ENSG00000214189.9	ENST00000601686.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTGCAGTGAGCTGAGAG	5	True	NA	NA	False	NA	NA	NA	12092306	12137235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12092471_12135774_12135928_12137006
transcript_67052.known	chr19	-	586	2	FSM	ENSG00000132010.16	ENST00000478942.5	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGACAAGGCAATGCCTCT	-8	True	NA	NA	False	NA	NA	NA	12140355	12135485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12135896_12140179
transcript_67054.known	chr19	+	622	3	FSM	ENSG00000219665.8	ENST00000489336.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	3.5	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	20	False	NA	5	True	AATAAA	-20	NA	11987670	12003811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_12001773_12001823_12003391
transcript_67055.known	chr19	+	1257	3	FSM	ENSG00000219665.8	ENST00000406892.6	1257	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	59.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGCTCTGTGATTTCA	0	True	NA	NA	False	ATTAAA	-15	NA	11987616	12027194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_12001773_12001823_12026193
transcript_67056.known	chr19	+	516	3	FSM	ENSG00000219665.8	ENST00000495324.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	58.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAACCATGTGGTAAAG	5	True	NA	NA	False	CATAAA	-17	NA	11987655	12018470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_12001773_12001823_12018171
transcript_67057.known	chr19	-	2405	6	FSM	ENSG00000197647.13	ENST00000548669.2	2405	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.7184904764677	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	3	True	NA	-4	True	AATAAA	-29	NA	12035696	12014715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12030139_12030199_12034827_12034875_12035536
transcript_67058.known	chr19	+	566	2	FSM	ENSG00000214189.9	ENST00000596096.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACGTTTAAGGAAGAG	-4	True	NA	NA	False	AATAAA	-38	NA	12092262	12098214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12092471_12097856
transcript_67059.known	chr19	-	2651	8	FSM	ENSG00000213297.8	ENST00000430024.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.1268589866156	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCACTGATGCCCAA	-2	True	NA	-14	True	AATAAA	-16	NA	12156731	12132116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179_12140326_12142640_12142716_12147394_12147456_12147675_12147803_12156555
transcript_67060.known	chr19	+	474	5	FSM	ENSG00000196646.12	ENST00000425827.5	474	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.9652442232217	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGGTAGTCAGCGTGGAG	-22	True	NA	NA	False	NA	NA	NA	12163063	12186602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12163207_12169281_12169392_12185784_12185912_12186113_12186175_12186569
transcript_67063.known	chr19	+	3601	4	FSM	ENSG00000196646.12	ENST00000343979.6	3601	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	8.2192186706253	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTCATGGATTGTG	10	True	NA	3	True	AATAAA	-14	NA	12163095	12189871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12163207_12185784_12185912_12186113_12186175_12186569
transcript_67065.known	chr19	+	478	3	FSM	ENSG00000196646.12	ENST00000439995.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAACACATGAGATAATTCA	-22	True	NA	NA	False	NA	NA	NA	12163063	12186843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12163207_12186113_12186175_12186569
transcript_67068.known	chr19	-	2780	5	FSM	ENSG00000197857.15	ENST00000356109.10	2780	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	11.0312057364551	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	0	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12293231_12293376_12294691
transcript_67071.known	chr19	-	2636	4	FSM	ENSG00000197857.15	ENST00000355684.6	2636	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.29983164553722	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	0	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12294691
transcript_67074.known	chr19	-	556	3	FSM	ENSG00000197857.15	ENST00000483826.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTCCCTCCTGTAAAC	3	True	NA	NA	False	TATAAA	-18	NA	12294880	12291027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12291251_12293231_12293376_12294691
transcript_67075.known	chr19	+	412	1	FSM	ENSG00000213293.4	ENST00000461223.1	412	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCTGCCCCCAAAGCAA	26	False	NA	NA	False	NA	NA	NA	12260125	12260537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12260100_12260500
transcript_67077.nic	chr19	-	1488	5	NIC	ENSG00000188868.14	novel	958	5	NA	NA	-16	674	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	5.30919014539883	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAAAGCCTTTCATAA	NA	False	NA	NA	False	AATAAA	-33	NA	12333736	12318504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12319312_12319429_12319666_12321271_12321333_12322584_12322712_12333479
transcript_67078.known	chr19	-	958	5	FSM	ENSG00000188868.14	ENST00000595977.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4.74341649025257	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATACATGTAAACAGTGT	-6	True	NA	NA	False	NA	NA	NA	12333720	12319186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12319312_12319429_12319834_12321271_12321333_12322584_12322712_12333479
transcript_67079.known	chr19	-	564	5	FSM	ENSG00000188868.14	ENST00000601858.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.79422863405995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCACACTGGAAAGAAACG	212	False	NA	NA	False	NA	NA	NA	12333502	12319541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12324918_12324980_12333479
transcript_6708.nnic	chr1	+	2462	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	-7	-646	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	58.5168541723	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	6	True	NA	16	True	AATATA	-20	NA	77979273	78017318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
transcript_67080.known	chr19	-	2699	4	FSM	ENSG00000188868.14	ENST00000293725.10	2699	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.74165738677394	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAAGACATA	0	True	NA	NA	False	AAAACA	-33	NA	12333633	12317476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12333479
transcript_67083.nic	chr19	-	2310	4	NIC	ENSG00000198342.10	novel	6274	6	NA	NA	-27	208	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.55902608401044	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGTGTTGTAAAAGCT	NA	False	NA	-19	True	AATAAA	-19	NA	12365710	12349374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12351319_12352009_12352071_12352987_12353115_12365532
transcript_67084.known	chr19	-	1906	3	FSM	ENSG00000198342.10	ENST00000438182.5	1906	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATCCCCTAACCATATG	0	True	NA	NA	False	NA	NA	NA	12365641	12349582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12351319_12352009_12352071_12365532
transcript_67087.known	chr19	+	576	5	FSM	ENSG00000173875.14	ENST00000597691.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	32.7595405950694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTGCCGGAGTAAAACC	-8	True	NA	NA	False	NA	NA	NA	12610919	12627805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12611083_12612225_12612366_12623699_12623827_12624649_12624711_12627720
transcript_67088.nnic	chr19	-	772	5	NNC	ENSG00000269755.1	novel	588	5	NA	NA	51	-18265	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	5.76085931090146	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAGAATATTTACTTTC	32	False	NA	NA	False	AATAAA	-19	NA	12484765	12451367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_12451694_12457426_12457577_12466461_12466520_12466723_12466851_12484654
transcript_67090.known	chr19	+	6465	4	FSM	ENSG00000173875.14	ENST00000343325.9	6465	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	6.68331255192114	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATATGGGAGTTTGTT	-8	True	NA	NA	False	AGTAAA	-21	NA	12610919	12633834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12611083_12623699_12623827_12624649_12624711_12627720
transcript_67093.known	chr19	-	2583	4	FSM	ENSG00000196466.10	ENST00000430385.3	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.32049379893857	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	-7	True	NA	-1	True	ATTAAA	-22	NA	12401271	12390015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12392207_12392602_12392664_12393296_12393424_12401067
transcript_67094.known	chr19	-	2573	4	FSM	ENSG00000180855.16	ENST00000301547.10	2573	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	2.16024689946929	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTCTTCTGTTTAATG	0	True	NA	NA	False	ATTAAA	-22	NA	12441021	12429705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12431981_12432376_12432438_12433070_12433198_12440911
transcript_67097.known	chr19	-	4897	4	FSM	ENSG00000242852.7	ENST00000397732.8	4897	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCAGATTAAGTTTTT	-19	True	NA	NA	False	ATTAAA	-20	NA	12484816	12461183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12465734_12466461_12466520_12466723_12466851_12484654
transcript_67099.known	chr19	-	2885	4	FSM	ENSG00000249709.8	ENST00000339282.12	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	3.29983164553722	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGCATTTCCATTTCT	-21	True	NA	NA	False	ATTAAA	-17	NA	12551482	12525372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12551329
transcript_671.known	chr1	-	1317	1	FSM	ENSG00000225880.5	ENST00000473798.1	1317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAAGCTCACCTTTTA	-7	True	NA	-12	True	AATAAA	-14	NA	827522	826205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_826200_827500
transcript_67103.nnic	chr19	-	618	3	NNC	ENSG00000242852.7	novel	4897	4	NA	NA	20	9816	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCAGAATATTTACTTTC	1	True	NA	NA	False	AATAAA	-19	NA	12484796	12451367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_12451694_12457426_12457577_12484654
transcript_67104.known	chr19	+	294	2	FSM	ENSG00000173875.14	ENST00000498389.1	294	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGCTTCCTTCCTTTA	2	True	NA	NA	False	NA	NA	NA	12610957	12612394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12611083_12612225
transcript_67105.known	chr19	-	6108	5	FSM	ENSG00000188033.10	ENST00000311437.11	6108	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	7.88986691902975	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGAGTTTTTCAT	1	True	NA	0	True	ATTAAA	-23	NA	12610813	12576099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12581725_12582849_12582911_12583429_12583557_12609157_12609203_12610563
transcript_67106.known	chr19	-	3185	24	FSM	ENSG00000104774.13	ENST00000456935.7	3185	24	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_17	38.1150878837454	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCTCTGTGACTGAGTG	-15	True	NA	-18	True	ATTAAA	-20	NA	12666742	12646511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658511_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
transcript_67109.known	chr19	+	1425	11	FSM	ENSG00000123154.12	ENST00000548381.5	1425	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	62.1147325519478	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCAGTCCTCGTTCT	-13	True	NA	14	True	AATAAA	-33	NA	12666813	12675831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_6711.known	chr1	+	949	3	FSM	ENSG00000162616.9	ENST00000487931.1	949	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	51	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGGCACTGAAAATATA	3	True	NA	NA	False	AATGAA	-22	NA	77979174	78016274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77979294_78013050_78013620_78016013
transcript_67116.known	chr19	+	1480	10	FSM	ENSG00000123154.12	ENST00000546754.5	1480	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	65.4451046938964	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAATAGAAGAGGGGG	-25	True	NA	-26	True	AAAAAG	-25	NA	12666801	12675791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12666993_12668507_12668628_12669754_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_67132.known	chr19	-	1172	9	FSM	ENSG00000095059.17	ENST00000594424.5	1172	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	128.243664560866	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	689	False	NA	-28	True	NA	NA	NA	12681206	12675742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681032
transcript_67135.known	chr19	-	1345	9	FSM	ENSG00000095059.17	ENST00000210060.12	1345	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	53.9801757592544	2898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	15	False	12681895	-2	True	NA	NA	NA	12681880	12675716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_6714.known	chr1	+	2903	3	FSM	ENSG00000162616.9	ENST00000370763.6	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	52.5	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	-2	True	NA	12	True	TATAAA	-16	NA	78004938	78017964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_78005322_78013050_78013620_78016013
transcript_67148.known	chr19	-	1090	8	FSM	ENSG00000095059.17	ENST00000351660.9	1090	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	129.978020119887	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	124	False	NA	-7	True	NA	NA	NA	12681771	12675721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676106_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_67150.known	chr19	-	1133	8	FSM	ENSG00000095059.17	ENST00000601639.5	1133	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	135.907531589891	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGAAGTCCTTCCATGT	88	False	NA	-19	True	NA	NA	NA	12681807	12675733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12680160_12680326_12681559
transcript_67158.known	chr19	-	1176	8	FSM	ENSG00000095059.17	ENST00000601537.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	128.969384122032	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGCTACGTCTCTAGAA	4	True	NA	-47	True	NA	NA	NA	12681860	12675761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676143_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_6717.known	chr1	-	209	1	FSM	ENSG00000273338.1	ENST00000608684.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTAAACATGATTTTAG	-1	True	NA	NA	False	AATAAA	-31	NA	78004554	78004345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_78004300_78004600
transcript_6718.known	chr1	+	906	2	FSM	ENSG00000162616.9	ENST00000484662.1	906	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGTTGGTAGGACCTA	13	False	NA	NA	False	AATATA	-29	NA	77979280	78013617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77979620_78013050
transcript_67182.known	chr19	-	645	1	FSM	ENSG00000178464.6	ENST00000325000.4	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3081	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCAATGTGCTGCCC	3671	False	NA	-57	True	NA	NA	NA	12643919	12643274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12643300_12643900
transcript_67183.known	chr19	-	599	4	FSM	ENSG00000105583.11	ENST00000222190.9	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	837.778544060952	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCAGCCTCTTCTGT	13	True	NA	-22	True	AATAAA	-12	NA	12669403	12668074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12668426_12668519_12668612_12669127_12669234_12669353
transcript_67184.known	chr19	-	1085	2	FSM	ENSG00000095059.17	ENST00000600510.1	1085	2	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	0	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTAGAATAAGATGGTAT	4977	False	NA	-36	True	NA	NA	NA	12676918	12675750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016
transcript_67185.known	chr19	-	553	5	FSM	ENSG00000095059.17	ENST00000598246.5	553	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	172.312760699839	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	2375	False	NA	-2	True	NA	NA	NA	12679520	12675716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676079_12677107_12677212_12677290_12677397_12679456
transcript_67186.known	chr19	-	464	4	FSM	ENSG00000095059.17	ENST00000600864.5	464	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	192.739893812015	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	2355	False	NA	-7	True	NA	NA	NA	12679540	12675721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676079_12677290_12677397_12679456
transcript_67187.known	chr19	-	627	3	FSM	ENSG00000105583.11	ENST00000598732.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	1657	junction_2	54	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCATGTTTCTAGGGG	15	True	NA	-92	True	NA	NA	NA	12669401	12668144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12668618_12669127_12669234_12669353
transcript_67188.nic	chr19	-	1598	9	NIC	ENSG00000132004.13	novel	1727	10	NA	NA	-11	0	intron_retention	FALSE	canonical	2	8	junction_8	49.0407993409569	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	-11	True	NA	-6	True	AATAAA	-22	NA	12696642	12688915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12696172
transcript_6719.known	chr1	+	5429	3	FSM	ENSG00000122420.10	ENST00000370757.8	5429	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCCTTTGCACTTTTAA	-41	True	NA	NA	False	AATAAA	-20	NA	78490973	78540701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_78491237_78492671_78493542_78536405
transcript_67193.known	chr19	-	1727	10	FSM	ENSG00000132004.13	ENST00000393261.8	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	16.0030861221234	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	0	True	NA	-6	True	AATAAA	-22	NA	12696631	12688915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12694798_12694939_12696172
transcript_672.nnic	chr1	+	603	2	NNC	ENSG00000272438.1	novel	351	2	NA	NA	-23	-10230	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTGTTTGCTTTAACG	-3	True	NA	2	True	NA	NA	NA	904810	905746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_904962_905294
transcript_67207.known	chr19	-	879	3	FSM	ENSG00000123144.11	ENST00000242784.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_2	570.5	2909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	-12	True	NA	-7	True	AGTAAA	-21	NA	12734684	12730639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12731069_12731343_12731422_12734312
transcript_67208.known	chr19	-	930	2	FSM	ENSG00000123144.11	ENST00000589590.1	930	2	0	0	0	0	multi-exon	FALSE	canonical	3	2403	junction_1	0	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCGGAGCTGTGTGCTT	5022	False	NA	-16	True	AGTAAA	-12	NA	12731853	12730648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12731069_12731343
transcript_6721.known	chr1	-	3539	15	FSM	ENSG00000162618.15	ENST00000370742.4	3539	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1.28769688409428	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCCGCTACAGCTTTG	-11	True	NA	NA	False	AATAAA	-17	NA	79006730	78889763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_78891217_78891523_78891693_78893097_78893190_78917633_78917701_78917829_78918051_78920182_78920387_78921612_78921787_78926885_78927092_78936294_78936412_78937806_78937991_78938099_78938280_78939187_78939259_78946273_78946427_79005069_79005220_79006632
transcript_67213.known	chr19	+	1368	8	FSM	ENSG00000198356.12	ENST00000591090.5	1368	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	449.247897568133	9449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	6114	False	NA	27	True	AATAAA	-16	NA	12737138	12748323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12737194_12737458_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_67217.known	chr19	+	1275	7	FSM	ENSG00000198356.12	ENST00000357332.8	1275	7	0	0	0	0	multi-exon	FALSE	canonical	1	456	junction_4	275.050096447094	8335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	2	True	NA	27	True	AATAAA	-16	NA	12737496	12748323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_67219.known	chr19	-	2603	22	FSM	ENSG00000095066.12	ENST00000264827.9	2603	22	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_6	79.4863898274444	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGTGCTCTGGGCA	9113	False	NA	-28	True	AATAAA	-14	NA	12775620	12763003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102_12766241_12767394_12767465_12767815_12767904_12768012_12768124_12769880_12770083_12770931_12771073_12771158_12771320_12771396_12771478_12772189_12772253_12772612_12772681_12772779_12772913_12772993_12773045_12774668_12774742_12774811_12774898_12775404
transcript_67228.known	chr19	-	890	3	FSM	ENSG00000095066.12	ENST00000589134.5	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	23	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAGTAGTTCTGTGA	-1	True	NA	NA	False	AAAAAG	-29	NA	12775544	12774077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12774742_12774811_12774898_12775404
transcript_67229.known	chr19	-	403	3	FSM	ENSG00000095066.12	ENST00000592512.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_2	303.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGGAGTACTCACCCT	7847	False	NA	NA	False	NA	NA	NA	12778409	12774534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12774742_12774811_12774898_12778299
transcript_67230.known	chr19	-	594	3	FSM	ENSG00000095066.12	ENST00000591641.5	594	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	315.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGTTCAAGACCAGCC	5	True	NA	NA	False	NA	NA	NA	12778446	12774335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12774742_12774811_12774898_12778344
transcript_67238.known	chr19	-	1114	2	FSM	ENSG00000095066.12	ENST00000592808.1	1114	2	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGGGAATAGCAGATGT	-29	True	NA	NA	False	NA	NA	NA	12775572	12773951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12774898_12775404
transcript_67246.known	chr19	-	925	6	FSM	ENSG00000167815.12	ENST00000301522.3	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	8033	junction_5	530.593629814758	18868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTGGTGTGCT	0	True	NA	-9	True	AATAAA	-17	NA	12801800	12796822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12797167_12799858_12799990_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_67247.known	chr19	+	296	2	FSM	ENSG00000267062.1	ENST00000585496.1	296	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGGCGCGGGGGAGGG	2779	False	NA	NA	False	NA	NA	NA	12796822	12801849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12797023_12801753
transcript_67248.known	chr19	-	784	5	FSM	ENSG00000167815.12	ENST00000334482.9	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	3486.44047525553	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGCTCTG	92	False	NA	-6	True	AATAAA	-20	NA	12801787	12796819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12797167_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_6725.nnic	chr1	+	1657	2	Genic_Genomic	ENSG00000235089.1	novel	643	1	NA	NA	-110378	48	multi-exon	FALSE	canonical	0	0	junction_1	0	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATGTCTTTCAGCAGA	NA	False	NA	NA	False	AATAAA	-24	NA	81098189	81209258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_81099084_81208495
transcript_67257.known	chr19	+	1164	8	FSM	ENSG00000104889.7	ENST00000221486.6	1164	8	0	0	0	0	multi-exon	TRUE	canonical	3	894	junction_6	37.7202376255852	5267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGGTTTGATTTTT	12	True	NA	24	True	AATAGA	-20	NA	12806583	12813640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_67258.known	chr19	+	878	4	FSM	ENSG00000104889.7	ENST00000590121.2	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_3	41.3843770844345	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCACGGCTGTAA	51	False	NA	20	True	AATAAA	-35	NA	12806676	12807976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418
transcript_67259.known	chr19	+	1245	6	FSM	ENSG00000104889.7	ENST00000593017.2	1245	6	0	0	0	0	multi-exon	FALSE	canonical	3	894	junction_4	29.3802654855262	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACACGTAGGGGATGT	58	False	NA	23	True	ATTAAA	-13	NA	12806683	12813525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12807080_12807205_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_6726.known	chr1	+	643	1	FSM	ENSG00000235089.1	ENST00000426688.1	643	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATTAAGGCACATTTGA	26	False	NA	NA	False	NA	NA	NA	81208567	81209210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_81208600_81209200
transcript_67262.known	chr19	+	1496	13	FSM	ENSG00000105613.10	ENST00000591495.5	1496	13	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	19.6659604392971	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAGTCATTGATTTG	16	True	NA	-34	True	NA	NA	NA	12833950	12858864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12834007_12838268_12838301_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
transcript_67271.known	chr19	-	1328	7	FSM	ENSG00000132026.15	ENST00000322912.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	10.3077640640442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	19	False	NA	-5	True	AATAAA	-17	NA	12835416	12825481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784_12834847_12835082
transcript_67272.nic	chr19	-	1434	7	NIC	ENSG00000132026.15	novel	1328	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_5	10.5934990547138	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-12	True	NA	-5	True	AATAAA	-17	NA	12835447	12825481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12829029_12829810_12829998_12834784_12834847_12835082
transcript_67273.known	chr19	-	620	6	FSM	ENSG00000132026.15	ENST00000590404.6	620	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	11.13552872566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCGCGGTACCTCGTC	887	False	NA	NA	False	NA	NA	NA	12834548	12825841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829986_12834488
transcript_67275.known	chr19	+	4853	26	FSM	ENSG00000105613.10	ENST00000251472.9	4853	26	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_14	13.9771241677249	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGGGGCTCACTCCT	18	True	NA	27	True	AATAAA	-20	NA	12838514	12874952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12838656_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530_12858740_12864808_12864948_12865045_12865179_12865315_12865482_12865716_12865819_12865979_12866103_12866652_12866763_12867473_12867653_12867729_12867978_12868642_12868850_12869065_12869296_12870823_12870947_12871035_12871173_12873323_12873512_12873608
transcript_67278.known	chr19	+	739	3	FSM	ENSG00000267424.1	ENST00000588469.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.5	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGGAGGAGCGGCGA	NA	False	NA	-77	True	NA	NA	NA	12825710	12832983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12825913_12826784_12826893_12832554
transcript_67282.known	chr19	-	1938	6	FSM	ENSG00000105612.9	ENST00000222219.8	1938	6	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_2	27.1116211245289	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTGTTAACCTTCTCT	-5	True	NA	-4	True	AATAAA	-15	NA	12881449	12875208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12876364_12878381_12878580_12878669_12878835_12880801_12880881_12880971_12881153_12881289
transcript_67285.known	chr19	-	745	5	FSM	ENSG00000105612.9	ENST00000592506.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	102.49878048055	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGTGAACCAGATAGC	23	True	NA	NA	False	NA	NA	NA	12881466	12876253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12876364_12878381_12878580_12880801_12880881_12880971_12881153_12881289
transcript_67287.known	chr19	-	1613	3	FSM	ENSG00000105610.6	ENST00000264834.6	1613	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCGTTGGCCTGAAT	-3	True	NA	NA	False	TATAAA	-20	NA	12887201	12884421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12885061_12885316_12886143_12887053
transcript_67289.known	chr19	+	1852	12	FSM	ENSG00000105607.13	ENST00000222214.10	1852	12	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	69.7486633066029	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGAGAAGTAGTTTCA	-10	True	NA	36	True	NA	NA	NA	12891159	12899999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_673.nnic	chr1	+	679	2	NNC	ENSG00000272438.1	novel	351	2	NA	NA	-23	-10154	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGGCCCACCCCACCGCG	-3	True	NA	78	True	AATAAA	-16	NA	904810	905822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_904962_905294
transcript_67303.known	chr19	+	791	6	FSM	ENSG00000105607.13	ENST00000587832.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	82.2206786641901	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCCCAAAGTTTAAAGT	10	True	NA	NA	False	NA	NA	NA	12891179	12893882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482
transcript_67305.known	chr19	-	1248	6	FSM	ENSG00000161860.8	ENST00000293695.8	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	1.93907194296653	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAGATAGGGTCTCACT	-14	True	NA	NA	False	NA	NA	NA	12919293	12898785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12899386_12900003_12900121_12900459_12900649_12904491_12904667_12918221_12918338_12919242
transcript_67308.known	chr19	+	1051	5	FSM	ENSG00000105607.13	ENST00000590627.5	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	91.9211618725525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCTCTGTGACCACCGTC	10	True	NA	NA	False	NA	NA	NA	12891179	12893834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891975_12892115_12892179_12893482
transcript_6731.known	chr1	+	308	1	FSM	ENSG00000223026.1	ENST00000411094.1	308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTGTCTAAAATTGTAA	NA	False	NA	NA	False	NA	NA	NA	81251788	81252096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_81251800_81252100
transcript_67314.known	chr19	+	748	1	FSM	ENSG00000240616.1	ENST00000464444.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTTTGAGTAACAAATA	10	False	NA	NA	False	NA	NA	NA	12894132	12894880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12894100_12894900
transcript_67315.known	chr19	+	1867	11	FSM	ENSG00000105607.13	ENST00000591470.5	1867	11	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	46.2783966878715	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGACCTGCACATC	-10	True	NA	-17	True	NA	NA	NA	12891159	12899946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_67316.known	chr19	+	1006	2	FSM	ENSG00000105607.13	ENST00000588242.2	1006	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTCGGAAAATCAAACAAGAG	5448	False	NA	-10	True	NA	NA	NA	12899570	12900670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12900140_12900233
transcript_67317.known	chr19	-	1811	13	FSM	ENSG00000179115.11	ENST00000314606.9	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_4	56.176000708092	2285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGCTTTCCTTAGGG	3	True	NA	-19	True	AATAAA	-18	NA	12933711	12922478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_67318.known	chr19	-	1720	12	FSM	ENSG00000179115.11	ENST00000423140.6	1720	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	314.153486727651	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTGGCTTTCCTTAGG	0	True	NA	-20	True	AATAAA	-17	NA	12933714	12922479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_67319.known	chr19	-	1831	12	FSM	ENSG00000179115.11	ENST00000588965.5	1831	12	0	0	0	0	multi-exon	FALSE	canonical	3	1021	junction_8	52.0357474075703	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGGCCCTGAGGAGACCT	9922	False	NA	-80	True	NA	NA	NA	12933696	12922539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_67320.known	chr19	+	1901	9	FSM	ENSG00000179218.15	ENST00000316448.10	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	2624	junction_3	208.782183147892	4728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	0	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_67321.known	chr19	+	1661	8	FSM	ENSG00000179218.15	ENST00000588454.6	1661	8	0	0	0	0	multi-exon	FALSE	canonical	2	119	junction_2	1037.41139774116	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	36	False	NA	25	True	ATTAAA	-17	NA	12938644	12944489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12938771_12939133_12939236_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_67322.known	chr19	+	1678	10	FSM	ENSG00000179218.15	ENST00000586967.2	1678	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	956.217664667529	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	0	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712_12943989_12944211
transcript_67323.known	chr19	-	270	2	FSM	ENSG00000267458.1	ENST00000589120.1	270	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACCAGTTTAAAAAAAAAA	3805	False	NA	NA	False	GATAAA	-1	NA	12944487	12944117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12944224_12944323
transcript_67324.known	chr19	-	1769	2	FSM	ENSG00000179271.3	ENST00000316939.3	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_1	0	2905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTTTATAAAACTT	-5	True	NA	NA	False	AATAAA	-17	NA	12957223	12953118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12954527_12956862
transcript_67325.known	chr19	+	1772	9	FSM	ENSG00000179262.10	ENST00000586534.6	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_6	256.153762416249	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATGGTCTGTGCCTGC	-5	True	NA	26	True	AATAAA	-14	NA	12945861	12953642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12952688_12952854_12952935
transcript_67326.known	chr19	+	1871	10	FSM	ENSG00000179262.10	ENST00000651137.1	1871	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	569.333745337695	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTATGGTCTGTGCCT	-8	True	NA	24	True	AATAAA	-12	NA	12945858	12953640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12951491_12951590_12952688_12952854_12952935
transcript_67327.known	chr19	+	1691	9	FSM	ENSG00000179262.10	ENST00000593114.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	435.361326227997	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGTGAATAAAGTTT	27	False	NA	-3	True	GATAAA	-3	NA	12945893	12953613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948513_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
transcript_67331.known	chr19	-	2127	16	FSM	ENSG00000104907.13	ENST00000593157.5	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_15	104.989438622283	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-2	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_67343.known	chr19	-	2263	16	FSM	ENSG00000104907.13	ENST00000437766.5	2263	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_8	53.0821585427303	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTGTGGTTTGTGTAT	89	False	NA	-6	True	AATAAA	-25	NA	13116649	13104901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_67344.known	chr19	-	2179	15	FSM	ENSG00000104907.13	ENST00000221504.12	2179	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	103.953408912309	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	81	False	NA	-11	True	AATAAA	-20	NA	13116657	13104906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_67345.known	chr19	-	2128	17	FSM	ENSG00000104907.13	ENST00000357720.9	2128	17	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_8	51.4180172702138	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-2	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_67355.known	chr19	-	1304	8	FSM	ENSG00000104915.15	ENST00000587230.6	1304	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	153.332904465535	2647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-4	True	NA	-1	True	AATAAA	-23	NA	13150375	13144057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_67360.known	chr19	-	1128	7	FSM	ENSG00000104915.15	ENST00000343587.9	1128	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	191.633910244392	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	4658	False	NA	-1	True	AATAAA	-23	NA	13150346	13144057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145386_13149572_13149594_13149727_13149898_13150138
transcript_67364.known	chr19	-	940	7	FSM	ENSG00000104915.15	ENST00000440593.3	940	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	162.644465698106	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCGCCGACAGTGGTGTG	4663	False	NA	NA	False	NA	NA	NA	13150341	13144488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149605_13149727_13149898_13150138
transcript_67367.known	chr19	-	1073	6	FSM	ENSG00000104915.15	ENST00000591843.1	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	169.667203666472	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	15	True	NA	-1	True	AATAAA	-23	NA	13150287	13144057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149712_13149898_13150138
transcript_67370.known	chr19	-	1623	3	FSM	ENSG00000141837.22	ENST00000592864.3	1623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGTCAGTTTGAGAA	8537	False	NA	NA	False	NA	NA	NA	13624489	13518796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13519504_13599752_13600057_13623877
transcript_67375.known	chr19	+	1922	11	FSM	ENSG00000104957.14	ENST00000586600.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	37.6644394621771	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTGTTAGATGGAC	-7	True	NA	21	True	ATTAAA	-21	NA	13731759	13763296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_67379.known	chr19	+	1673	10	FSM	ENSG00000104957.14	ENST00000221554.13	1673	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	20.2325980707214	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	-19	True	NA	14	True	ATTAAA	-14	NA	13747894	13763289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_6738.nnic	chr1	-	554	2	Antisense	novelGene_ENSG00000117114.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAGGTATCTACC	NA	False	NA	NA	False	NA	NA	NA	81306624	81300478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_81300899_81306490
transcript_67383.known	chr19	+	1783	9	FSM	ENSG00000104957.14	ENST00000593174.5	1783	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	17.1373130916139	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	7	True	NA	4	True	ATTAAA	-4	NA	13747863	13763279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_67386.nic	chr19	+	1899	8	ISM	ENSG00000104957.14	ENST00000593174.5	1783	9	49	-13	16	3	intron_retention	FALSE	canonical	3	62	junction_1	18.3069073615086	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTTGGGTTGTTAGAT	-1	True	NA	17	True	ATTAAA	-17	NA	13747912	13763292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298
transcript_67393.nnic	chr19	+	750	2	NNC	ENSG00000104957.14	novel	617	2	NA	NA	-9	-8	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATACTTTCTTTCTTTT	-16	True	NA	NA	False	NA	NA	NA	13731750	13732594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_13732081_13732174
transcript_67394.nic	chr19	+	737	2	ISM	ENSG00000104957.14	ENST00000588071.5	1157	8	-15	26559	-8	-8	5prime_fragment	FALSE	canonical	3	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCATACTTTCTTTCTTTT	-15	True	NA	NA	False	NA	NA	NA	13731751	13732594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_13732069_13732174
transcript_67395.known	chr19	+	617	2	FSM	ENSG00000104957.14	ENST00000587098.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTTTTTTTTT	-5	True	NA	NA	False	AAAAAG	-8	NA	13731761	13732602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13731951_13732174
transcript_67396.known	chr19	+	694	5	FSM	ENSG00000104957.14	ENST00000588809.1	694	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	48.5643902463523	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTGGGCACAGTGACT	8255	False	NA	NA	False	AATAAA	-28	NA	13756207	13759478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759116
transcript_67399.known	chr19	-	463	2	FSM	ENSG00000267633.1	ENST00000591826.1	463	2	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTGGCGGAGTCAGGA	4275	False	NA	NA	False	NA	NA	NA	13774118	13772472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13772634_13773816
transcript_67400.known	chr19	+	504	2	FSM	ENSG00000104979.9	ENST00000221576.4	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTGCAGTCCTGTGT	20	True	NA	14	True	AATAAA	-14	NA	13774478	13778459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774575_13778051
transcript_67401.known	chr19	+	897	3	FSM	ENSG00000104979.9	ENST00000588234.6	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	2379	junction_1	63	7847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGGTACTACCTGGTT	-3	True	NA	NA	False	ATTAAA	-19	NA	13774455	13778773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774575_13774651_13774708_13778051
transcript_67402.known	chr19	+	499	2	FSM	ENSG00000104979.9	ENST00000588841.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	2505	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGGTCCTGCCTCCA	102	False	NA	-42	True	NA	NA	NA	13774560	13778403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774708_13778051
transcript_67403.known	chr19	+	666	4	FSM	ENSG00000104979.9	ENST00000588858.5	666	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1111.89937594291	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGCAGTCCTGTGTTC	59	False	NA	16	True	AATAAA	-16	NA	13774517	13778461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774575_13774651_13774708_13775470_13775614_13778051
transcript_67404.known	chr19	+	491	2	FSM	ENSG00000104979.9	ENST00000593274.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCAGTCCTGTGTTCG	-5	True	NA	17	True	AATAAA	-17	NA	13774823	13778462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774904_13778051
transcript_67407.nnic	chr19	-	984	5	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCCGTTTGGTATATA	NA	False	NA	NA	False	AATAAA	-18	NA	13818013	13811347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr19_-_13811523_13812793_13813031_13813229_13813441_13816501_13816603_13817753
transcript_67410.known	chr19	+	446	2	FSM	ENSG00000187556.8	ENST00000591727.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACAAGCCCTGGTCTTGG	3	True	NA	NA	False	AATAAA	-22	NA	13862062	13880755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13862195_13880441
transcript_67411.known	chr19	+	948	2	FSM	ENSG00000187556.8	ENST00000339133.6	948	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGCCCTGGTCTTGGGA	2	True	NA	NA	False	AATAAA	-24	NA	13877133	13880757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13877766_13880441
transcript_67412.known	chr19	+	3117	29	FSM	ENSG00000132024.18	ENST00000589606.5	3117	29	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_23	50.6534846797738	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGCCCCGGAGCAGGGA	129	False	NA	NA	False	NA	NA	NA	13906441	13930659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928126_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
transcript_67422.known	chr19	-	645	2	FSM	ENSG00000132016.12	ENST00000586500.1	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGAGGGAAACTGTGTCT	6855	False	NA	NA	False	NA	NA	NA	13883600	13882600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13882953_13883307
transcript_67423.known	chr19	+	2278	13	FSM	ENSG00000132017.11	ENST00000254337.11	2261	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	303	junction_6	40.7338072803851	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	13	False	NA	16	True	AATAAA	-22	NA	13952491	13961449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
transcript_67425.nnic	chr19	+	1598	9	NNC	ENSG00000132017.11	novel	2261	13	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	123.130964322546	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	-4	True	NA	16	True	AATAAA	-22	NA	13952474	13961449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_13952524_13956446_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
transcript_67427.known	chr19	-	502	2	FSM	ENSG00000132000.14	ENST00000588317.1	502	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATGTTGTTTCAAAA	106	False	NA	NA	False	AATAAA	-19	NA	13953277	13949287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13949631_13953118
transcript_67428.nic	chr19	-	459	3	ISM	ENSG00000132005.9	ENST00000588885.1	886	5	-81	10565	-21	4290	5prime_fragment	FALSE	canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTATTTATTATCATTT	-3	True	NA	NA	False	ATTAAA	-11	NA	14006343	13993877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_13993896_13998117_13998318_14006102
transcript_67429.nic	chr19	-	441	2	ISM	ENSG00000132005.9	ENST00000588885.1	886	5	-81	14805	-21	50	5prime_fragment	FALSE	canonical	0	0	junction_1	0	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTAATATGTTAATGAG	-3	True	NA	-1	True	NA	NA	NA	14006343	13998117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_13998318_14006102
transcript_67430.known	chr19	+	352	1	FSM	ENSG00000275091.1	ENST00000622575.1	352	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCCGCTCCAGACTTCTC	554	False	NA	NA	False	ATTAAA	-16	NA	14006421	14006773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14006400_14006800
transcript_67431.known	chr19	+	2950	14	FSM	ENSG00000104998.4	ENST00000263379.4	2950	14	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_6	15.1071126318369	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	-23	True	NA	8	True	AATAAA	-21	NA	14031761	14053218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14031973_14032385_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
transcript_67432.known	chr19	-	2383	5	FSM	ENSG00000187867.10	ENST00000589048.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	4.7169905660283	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTTGAATGTGTGTGT	4	True	NA	-24	True	AATAAA	-17	NA	14057599	14053366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057350
transcript_67436.known	chr19	-	2196	5	FSM	ENSG00000141858.12	ENST00000533683.7	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_4	47.9635278102018	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAAAGCCACGGAG	-16	True	NA	-14	True	AATAAA	-19	NA	14090751	14087850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14088576_14088670_14088783_14088879_14088977_14089067_14089363_14089784
transcript_67438.known	chr19	-	1689	4	FSM	ENSG00000105011.9	ENST00000263382.8	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	23.6126143312331	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTTGTGCTTTTGTC	-3	True	NA	-4	True	ATTAAA	-39	NA	14136589	14119511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14120666_14121531_14121709_14126121_14126238_14136347
transcript_67441.known	chr19	-	587	3	FSM	ENSG00000105011.9	ENST00000589468.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCTCCTCCCTGAGAA	-3	True	NA	NA	False	GGGGCT	-14	NA	14136589	14120497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14120666_14121531_14121709_14136347
transcript_67442.known	chr19	-	765	3	FSM	ENSG00000105011.9	ENST00000474890.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	18.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATGAGCCAGA	12	False	NA	NA	False	NA	NA	NA	14136574	14121286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14121709_14126121_14126238_14136347
transcript_67444.nic	chr19	+	561	3	NIC	ENSG00000267169.2	novel	2894	3	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTCAGGTATTTCTT	-40	True	NA	NA	False	ATTAAA	-21	NA	14137132	14171267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_14137224_14155151_14155480_14171125
transcript_67445.known	chr19	+	686	2	FSM	ENSG00000267169.2	ENST00000588658.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGGCTATATTTGCTG	15	True	NA	NA	False	NA	NA	NA	14137187	14155801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14137224_14155151
transcript_67446.known	chr19	+	2894	3	FSM	ENSG00000267169.2	ENST00000588387.2	2894	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCAATCTCAGGTATTT	-27	True	NA	NA	False	ATTAAA	-18	NA	14137145	14171264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14137224_14155151_14155480_14168776
transcript_67451.known	chr19	-	164	2	FSM	ENSG00000267406.1	ENST00000589512.1	164	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTATATAGTGAGTGC	NA	False	NA	0	True	AATAAA	-35	NA	14269377	14267806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14267914_14269320
transcript_67454.known	chr19	+	768	2	FSM	ENSG00000267147.2	ENST00000588275.2	768	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTTGTGATATTCCCC	12	True	NA	NA	False	AATATA	-22	NA	14333742	14343916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14334020_14343425
transcript_67456.known	chr19	+	2751	18	FSM	ENSG00000123146.20	ENST00000358600.7	2751	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	3.69793732835334	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAGTCCAGGACACCC	-14	True	NA	NA	False	NA	NA	NA	14381155	14408275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
transcript_67457.known	chr19	+	572	4	FSM	ENSG00000123146.20	ENST00000587606.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGACAGGTGCACATGTA	-2	True	NA	NA	False	NA	NA	NA	14381415	14391197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923
transcript_6746.nnic	chr1	-	714	5	NNC	ENSG00000233290.3	novel	4079	5	NA	NA	-41	-85295	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.79422863405995	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGGTCTTTCTTTACG	NA	False	NA	NA	False	ATTAAA	-18	NA	82848246	82621298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_82621550_82632770_82632946_82656015_82656089_82833947_82834060_82848143
transcript_67464.known	chr19	-	1498	11	FSM	ENSG00000123136.15	ENST00000242776.9	1498	11	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_6	51.4800932400088	4089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGTCATCTTGGCCT	7	True	NA	0	True	AATAAA	-37	NA	14419341	14408797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_67465.known	chr19	-	1903	9	FSM	ENSG00000123136.15	ENST00000589318.5	1903	9	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_4	57.2407197718547	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	11	True	NA	-21	True	AATAAA	-16	NA	14419337	14408818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_67466.known	chr19	-	1355	10	FSM	ENSG00000123136.15	ENST00000324340.13	1355	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	327.89737930948	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	51	False	NA	-21	True	AATAAA	-16	NA	14419329	14408818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_67467.known	chr19	-	1921	9	FSM	ENSG00000123159.16	ENST00000393033.9	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_8	197.919135949508	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-12	True	NA	-3	True	CATAAA	-17	NA	14496127	14477761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492913_14496036
transcript_67468.known	chr19	-	1386	8	FSM	ENSG00000123159.16	ENST00000586027.5	1386	8	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	164.972601312077	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-17	True	NA	NA	False	NA	NA	NA	14496132	14478245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14496036
transcript_67469.nic	chr19	-	1564	8	NIC	ENSG00000123159.16	novel	1921	9	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_5	297.440853321278	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	27	True	NA	-3	True	CATAAA	-17	NA	14496088	14477761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14492856_14492913_14496036
transcript_67471.known	chr19	-	1068	7	FSM	ENSG00000123159.16	ENST00000591349.5	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	305.601410700642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-17	True	NA	NA	False	NA	NA	NA	14496132	14478245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14496036
transcript_67472.known	chr19	-	1483	6	FSM	ENSG00000123159.16	ENST00000393028.5	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	322.474185013312	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGGCTTCGGGGTG	6	True	NA	-1	True	CATAAA	-19	NA	14496149	14477759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14496036
transcript_67476.known	chr19	-	2208	4	FSM	ENSG00000132002.9	ENST00000598692.2	2208	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	346.97774504362	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAACCTCAGGGGAGCG	NA	False	NA	-13	True	ATTAAA	-7	NA	14529322	14514780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14516171_14516465_14517047_14527686_14527811_14529209
transcript_67477.known	chr19	-	2180	4	FSM	ENSG00000132002.9	ENST00000601533.6	2180	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	346.7374927649	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTAAACCTCAGGGGAG	-33	True	NA	-15	True	ATTAAA	-5	NA	14529308	14514782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14516171_14516465_14517047_14527686_14527811_14529221
transcript_67480.known	chr19	-	557	3	FSM	ENSG00000132002.9	ENST00000678628.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGAGACGGCCTAAGC	26	True	NA	NA	False	ATTAAA	-20	NA	14529249	14526180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14526613_14527725_14527811_14529209
transcript_67485.known	chr19	-	626	3	FSM	ENSG00000132002.9	ENST00000677790.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGGCCTAAGCTGCGGC	2	True	NA	NA	False	ATTAAA	-26	NA	14529273	14526174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14526613_14527686_14527811_14529209
transcript_67487.known	chr19	+	1170	13	FSM	ENSG00000099797.15	ENST00000642961.1	1170	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	378.320658745109	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGGCTCTGTGTGTT	-3	True	NA	-1	True	AATAAA	-18	NA	14529591	14565977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14529712_14562524_14562576_14563173_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_67488.known	chr19	+	1139	13	FSM	ENSG00000099797.15	ENST00000215567.10	1139	13	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_10	88.1097800095616	4711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	-1	True	NA	2	True	AATAAA	-21	NA	14529593	14565980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_67489.known	chr19	-	2242	3	FSM	ENSG00000132002.9	ENST00000254322.3	2242	3	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_1	20	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	-4	True	NA	-1	True	ATTAAA	-19	NA	14518397	14514768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14516171_14516465_14517047_14518138
transcript_67490.known	chr19	+	1204	13	FSM	ENSG00000099797.15	ENST00000600083.5	1204	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	409.074590794067	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	-1	True	NA	2	True	AATAAA	-21	NA	14529593	14565980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14529712_14562524_14562576_14563140_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_67491.known	chr19	+	584	6	FSM	ENSG00000099797.15	ENST00000599101.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_3	79.304476544518	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGCCCACAGCTCTCC	9	True	NA	-53	True	NA	NA	NA	14564693	14565925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_67492.known	chr19	+	720	5	FSM	ENSG00000099797.15	ENST00000593775.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_2	87.3709763022023	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACTCGGGCTCTGTGTG	13	True	NA	-3	True	AATAAA	-16	NA	14564697	14565975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_67493.known	chr19	+	1164	12	FSM	ENSG00000099797.15	ENST00000597607.5	1164	12	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_9	92.0012576270492	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGCTCTGTGTGTTT	31	False	NA	0	True	AATAAA	-19	NA	14529656	14565978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_67505.known	chr19	-	535	3	FSM	ENSG00000099795.7	ENST00000215565.3	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	2383	junction_2	69.5	20986	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-12	True	NA	-4	True	AATAAA	-19	NA	14572066	14566077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14566266_14566764_14566934_14571888
transcript_67514.nic	chr19	+	1121	7	ISM	ENSG00000160961.12	ENST00000597301.5	1569	11	-39	10985	-2	-4	5prime_fragment	FALSE	canonical	3	37	junction_6	7.17441441667696	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCTGTGCATGGTG	-5	True	NA	NA	False	NA	NA	NA	14690066	14707258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_14690151_14693450_14693495_14695009_14695134_14695565_14695662_14699198_14699282_14705053_14705171_14706685
transcript_67515.nic	chr19	+	628	2	ISM	ENSG00000160961.12	ENST00000596285.5	573	5	12	5417	-2	-5417	5prime_fragment	TRUE	canonical	3	53	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAAGT	-5	True	NA	NA	False	AGTAAA	-26	NA	14690066	14693994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_14690151_14693450
transcript_67518.nic	chr19	-	2489	16	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_15	102.691901660582	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	1	True	NA	-13	True	AATAAA	-29	NA	15125694	15114986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
transcript_67519.known	chr19	-	2305	16	FSM	ENSG00000105135.16	ENST00000263383.8	2305	16	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_15	49.4913684954817	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-10	True	NA	-13	True	AATAAA	-29	NA	15125786	15114986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
transcript_67537.known	chr19	-	559	3	FSM	ENSG00000074181.9	ENST00000597756.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	22.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTGGTGACTAAAGT	NA	False	NA	NA	False	AATAAA	-27	NA	15165967	15162332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15162563_15165367_15165516_15165786
transcript_67544.known	chr19	-	1838	7	FSM	ENSG00000105131.8	ENST00000221730.8	1838	7	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_6	16.0692943909253	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTGTATTTCATTTTTT	-29	True	NA	-2	True	AATACA	-25	NA	15232448	15226918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968
transcript_67545.known	chr19	-	1805	9	FSM	ENSG00000105131.8	ENST00000602233.5	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	65.8003609412593	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCACCAGCTGTATTTCA	8	True	NA	-8	True	AATACA	-19	NA	15233435	15226924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15227663_15227770_15227908_15227996_15228101_15230961_15231091_15231238_15231397_15231775_15231862_15231968_15232257_15232919_15233001_15233351
transcript_67547.known	chr19	-	1821	9	FSM	ENSG00000141867.19	ENST00000594841.5	1821	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	435.092931883523	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAGAAAAATAATAGCAG	3	True	NA	4	True	AATAAA	-34	NA	15331906	15256098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15331835
transcript_67549.known	chr19	-	3665	14	FSM	ENSG00000105127.10	ENST00000269701.7	3665	14	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_10	26.1721655298279	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACTAGTGGAACTGCTT	-11	True	NA	NA	False	ATTAAA	-17	NA	15379787	15353384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_67554.nic	chr19	-	1223	9	ISM	ENSG00000105127.10	ENST00000269701.7	3665	14	-44	14887	-16	5445	5prime_fragment	FALSE	canonical	3	191	junction_5	24.6221445044903	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGAGACAGGACGCGG	-2	True	NA	16	True	NA	NA	NA	15379831	15368271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_67555.known	chr19	-	2002	15	FSM	ENSG00000011243.19	ENST00000680649.1	2002	15	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_12	184.426468948954	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCCATCCCACCTC	-24	True	NA	-20	True	NA	NA	NA	15419030	15380065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403657_15403716_15404009_15404043_15410519_15410595_15418910
transcript_67557.known	chr19	-	1453	8	FSM	ENSG00000011243.19	ENST00000594893.5	1453	8	0	0	0	0	multi-exon	FALSE	canonical	1	284	junction_5	173.965396512276	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTTTTTACGGCTCT	0	True	NA	NA	False	NA	NA	NA	15418968	15399934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_67559.nic	chr19	-	925	5	ISM	ENSG00000011243.19	ENST00000594893.5	1453	8	-64	1215	-2	-182	5prime_fragment	FALSE	canonical	1	284	junction_2	214.856201911883	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGAGGCAGCCTTCC	-26	True	NA	NA	False	NA	NA	NA	15419032	15401149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_67560.known	chr19	-	2390	13	FSM	ENSG00000011243.19	ENST00000596213.6	2390	13	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_5	104.950649778307	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCCATCCCACCTC	-16	True	NA	-20	True	NA	NA	NA	15419022	15380065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15404043_15410519_15410595_15418910
transcript_67561.nic	chr19	-	767	2	ISM	ENSG00000011243.19	ENST00000601147.2	583	4	-44	6631	-2	-6631	5prime_fragment	FALSE	canonical	3	861	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAAAGGATTGGTCCAGG	-26	True	NA	NA	False	NA	NA	NA	15419032	15409949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_15410595_15418910
transcript_67562.known	chr19	-	3715	15	FSM	ENSG00000105127.10	ENST00000598597.7	3715	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	76.430340433466	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTCTGGGTCATTTC	-4	True	NA	1	True	AATAAA	-17	NA	15379815	15353520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15369066_15369225_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_67564.known	chr19	+	466	1	FSM	ENSG00000225067.4	ENST00000471227.3	466	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	190	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGCAGCTGCCTAA	NA	False	NA	-41	True	NA	NA	NA	15611656	15612122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_15611700_15612100
transcript_67566.known	chr19	+	2491	9	FSM	ENSG00000167460.17	ENST00000586833.7	2491	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	1285.68196276334	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATAGTATCACTTTT	-2	True	NA	21	True	AATAAA	-32	NA	16077015	16102946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16077131_16080914_16081076_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_6757.nnic	chr1	-	1937	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-41	-286557	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTGTGTGAACTAAT	NA	False	NA	NA	False	AATAAA	-10	NA	82848246	82822560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_82824283_82833947_82834060_82848143
transcript_67570.known	chr19	+	2447	8	FSM	ENSG00000167460.17	ENST00000655004.1	2447	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1043.42428805254	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATAGTATCACTTTT	8405	False	NA	21	True	AATAAA	-32	NA	16075940	16102946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16076173_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_67571.known	chr19	+	2474	8	FSM	ENSG00000167460.17	ENST00000643579.2	2474	8	0	0	0	0	multi-exon	FALSE	canonical	3	2824	junction_5	126.550304590059	2268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	-16	True	NA	11	True	AATAAA	-16	NA	16076494	16103002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_67574.known	chr19	-	3103	1	FSM	ENSG00000279198.1	ENST00000624324.1	3103	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTATGGTGTTTTG	9050	False	NA	NA	False	AATAAA	-18	NA	16077395	16074292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16074300_16077400
transcript_67576.known	chr19	+	585	6	FSM	ENSG00000196684.12	ENST00000593031.1	585	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.28035085019828	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCGCCAGAAACTCTGGAG	26	True	NA	NA	False	NA	NA	NA	16143735	16157329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16143775_16148723_16148801_16152551_16152642_16153042_16153209_16154398_16154492_16157209
transcript_67577.known	chr19	+	1957	6	FSM	ENSG00000196684.12	ENST00000613986.4	1957	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	1.93907194296653	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTGCAGGGTCTCTCT	-25	True	NA	NA	False	AATAAA	-33	NA	16143684	16158575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16143775_16148723_16148876_16152551_16152642_16153042_16153209_16154398_16154492_16157209
transcript_67579.known	chr19	+	2567	8	FSM	ENSG00000167461.12	ENST00000300935.8	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	899	junction_6	94.1605229468945	710	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTAATGTGTCTTTTG	-2	True	NA	20	True	NA	NA	NA	16111888	16134234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129553_16129605_16132211
transcript_6758.nnic	chr1	-	685	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-41	-208169	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	5	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTTATGATTTAAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	82848246	82744172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_82744643_82833947_82834060_82848143
transcript_67580.known	chr19	+	1463	4	FSM	ENSG00000105058.12	ENST00000263384.12	1463	4	0	0	0	0	multi-exon	FALSE	canonical	3	1033	junction_2	53.7215040742532	2745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTGTCTTCTTTTTT	-12	True	NA	43	True	AATAAA	-21	NA	16185409	16192046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16185517_16185623_16185766_16190519_16190574_16190886
transcript_67581.known	chr19	+	401	3	FSM	ENSG00000105058.12	ENST00000587351.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCATAAATGTGTGCAG	33	False	NA	NA	False	GATAAA	-13	NA	16185454	16186649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16185517_16185623_16185766_16186452
transcript_67582.known	chr19	+	12859	12	FSM	ENSG00000072958.9	ENST00000291439.8	12859	12	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_9	28.8610235037836	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCATTGTTTTCCTTT	-27	True	NA	NA	False	AATAAA	-23	NA	16197910	16245906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
transcript_67583.known	chr19	+	1578	11	FSM	ENSG00000072958.9	ENST00000429941.6	1578	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	121.541926922359	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCATCTGCCACGAAGG	-27	True	NA	NA	False	AAAAAG	-33	NA	16197910	16234784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16233492_16233619_16234198_16234275_16234412
transcript_67584.known	chr19	-	3216	24	FSM	ENSG00000127527.14	ENST00000455140.7	3216	24	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	59.9192272949337	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-4	True	NA	-16	True	TATAAA	-42	NA	16471970	16355246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16355852_16361778_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_67587.known	chr19	-	2924	23	FSM	ENSG00000127527.14	ENST00000248070.10	2924	23	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	50.4208732848799	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGGATGCTCTATCA	NA	False	NA	-21	True	AATAAA	-14	NA	16472085	16361580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_67588.nnic	chr19	-	2891	22	NIC	ENSG00000127527.14	novel	3216	24	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	90	junction_1	34.0804037960599	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-18	True	NA	-16	True	TATAAA	-42	NA	16471984	16355246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_16355852_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_67590.known	chr19	-	2489	22	FSM	ENSG00000127527.14	ENST00000594975.5	2489	22	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	59.0224216590899	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAAAAGGGGTTTGGG	NA	False	NA	NA	False	GGGGCT	-20	NA	16472085	16361888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402314_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_67594.known	chr19	-	420	4	FSM	ENSG00000127527.14	ENST00000602151.1	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	23.4568161143456	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTATTTTTCTT	67	False	NA	NA	False	TTTAAA	-42	NA	16471943	16440652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16440910_16441891_16441982_16442177_16442220_16471912
transcript_67595.known	chr19	-	2788	23	FSM	ENSG00000127527.14	ENST00000592031.5	2788	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_19	64.4794797263837	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGATGCTCTATCATA	-4	True	NA	-19	True	AATAAA	-16	NA	16471970	16361578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440884_16440910_16441891_16441982_16442177_16442220_16471912
transcript_67596.known	chr19	-	1263	9	FSM	ENSG00000269058.6	ENST00000269881.8	1263	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.3946555075835	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTACATGGCACTTTGTC	-1	True	NA	NA	False	NA	NA	NA	16496167	16479060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16479275_16480613_16480707_16482449_16482582_16482677_16482786_16483929_16484116_16485162_16485258_16490366_16490571_16495750_16495853_16496038
transcript_676.known	chr1	-	2757	19	FSM	ENSG00000188976.11	ENST00000327044.7	2757	19	0	0	0	0	multi-exon	TRUE	canonical	3	992	junction_1	193.018493644751	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	3	True	NA	-14	True	AATAAA	-29	NA	959256	944202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_944801_945056_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_67601.known	chr19	-	886	2	FSM	ENSG00000085872.15	ENST00000551747.1	886	2	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGACATTGAGAGGTGG	130	False	NA	NA	False	AATGAA	-21	NA	16542400	16541204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16542044_16542353
transcript_67602.known	chr19	+	3346	9	FSM	ENSG00000105072.9	ENST00000221671.8	3346	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	6.6226410894748	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGTGTGCTGTGCCT	-14	True	NA	16	True	ATTAAA	-17	NA	16496393	16521352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16520093
transcript_67603.known	chr19	-	4075	17	FSM	ENSG00000085872.15	ENST00000546361.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_3	56.1120530724015	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCCCGCACATGTGT	2	True	NA	-23	True	AATAAA	-16	NA	16542437	16517893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16519353_16519620_16519716_16520148_16520266_16520363_16520508_16520825_16520913_16521520_16521655_16523051_16523291_16525241_16525678_16528079_16528256_16529647_16529901_16530584_16530675_16530768_16530881_16532597_16532750_16533010_16533149_16535451_16535637_16541869_16542044_16542353
transcript_67604.nnic	chr19	+	603	2	Genic_Genomic	ENSG00000269399.2	novel	2069	1	NA	NA	-244	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTCTCAGGTGTTCTT	NA	False	NA	9	True	AATAAA	-20	NA	16542501	16544814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_+_16542680_16544389
transcript_6761.nnic	chr1	-	742	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-41	-222620	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGATCTAGCTATATGCTA	NA	False	NA	NA	False	ATTAAA	-32	NA	82848246	82758623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_82759151_82833947_82834060_82848143
transcript_67617.known	chr19	+	2717	1	FSM	ENSG00000279529.1	ENST00000623966.1	2717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTGCAGCATTTCTT	75	False	NA	117	True	AATAAA	-14	NA	16572623	16575340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16572600_16575300
transcript_67618.known	chr19	-	1473	1	FSM	ENSG00000269044.2	ENST00000598112.2	1473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTATATGCTGCATT	NA	False	NA	-8	True	AATAAA	-24	NA	16635269	16633796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16633800_16635300
transcript_67619.known	chr19	-	1081	1	FSM	ENSG00000269578.1	ENST00000593779.1	1081	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCATTGTTGTTTTTA	580	False	NA	NA	False	ATTAAA	-22	NA	16587985	16586904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16586900_16588000
transcript_67620.known	chr19	-	1281	5	FSM	ENSG00000214046.9	ENST00000465250.6	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	272.874513284037	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCGTGTGTGTGTTGTGT	7	True	NA	-20	True	AATAAA	-7	NA	16660130	16630750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16631725_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_67621.known	chr19	-	1360	5	FSM	ENSG00000214046.9	ENST00000487416.7	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_1	43.4453679924569	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-7	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_67622.known	chr19	-	1065	6	FSM	ENSG00000214046.9	ENST00000593404.5	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	182.192206199936	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-7	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_67623.known	chr19	-	1075	4	FSM	ENSG00000214046.9	ENST00000597711.5	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	234.90565482054	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGATTTGCTTGTTGA	-7	True	NA	-48	True	AATGAA	-30	NA	16660144	16646341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16647262_16659394_16659448_16659958_16660001_16660084
transcript_67624.known	chr19	-	534	5	FSM	ENSG00000214046.9	ENST00000602194.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	243.968619908381	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTTTGGGAGCCA	-7	True	NA	-41	True	NA	NA	NA	16660144	16646587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16646801_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_67625.known	chr19	-	850	5	FSM	ENSG00000214046.9	ENST00000358726.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	236.912826795005	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGCCTGCCTATAGTTC	-5	True	NA	NA	False	AATAAA	-18	NA	16660142	16652355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_67626.known	chr19	+	2631	6	FSM	ENSG00000072954.7	ENST00000187762.7	2631	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	18.0377382174152	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCATGGCTTGTCTGATT	-29	True	NA	15	True	AATAAA	-15	NA	16661138	16690023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16661342_16679983_16680141_16680396_16680582_16682420_16682509_16686287_16686406_16688143
transcript_67628.known	chr19	+	798	3	FSM	ENSG00000072954.7	ENST00000595452.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGATGCCAGTAGCACA	74	False	NA	NA	False	NA	NA	NA	16661241	16680937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16661342_16679983_16680141_16680396
transcript_67629.known	chr19	+	118	1	FSM	ENSG00000269419.1	ENST00000599446.1	118	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGACATTTTATATTT	NA	False	NA	NA	False	GATAAA	-25	NA	16712316	16712434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16712300_16712400
transcript_67631.known	chr19	-	1593	3	FSM	ENSG00000160111.15	ENST00000594249.6	1593	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACAACCACATGCAGT	NA	False	NA	NA	False	NA	NA	NA	16896973	16893108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16894438_16896175_16896327_16896860
transcript_67635.known	chr19	-	1055	11	FSM	ENSG00000131351.15	ENST00000598517.5	1055	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	63.6801381908048	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCAAGACAGTGCCTGC	21	True	NA	NA	False	NA	NA	NA	17075422	17050063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069100_17073273_17073336_17075393
transcript_67643.nnic	chr19	-	1430	10	NIC	ENSG00000131351.15	novel	1407	11	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	67.0104100996882	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	4823	False	NA	-35	True	AGTAAA	-13	NA	17075654	17049765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_17050177_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273_17073336_17075393
transcript_67651.known	chr19	-	675	2	FSM	ENSG00000131351.15	ENST00000597917.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	NA	False	NA	-30	True	AGTAAA	-18	NA	17053083	17049760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17050177_17052824
transcript_67652.known	chr19	+	909	2	FSM	ENSG00000099331.14	ENST00000593411.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACCTGTAATCCCAACA	427	False	NA	NA	False	AATACA	-27	NA	17102181	17103789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17102558_17103256
transcript_67654.known	chr19	+	559	4	FSM	ENSG00000053501.14	ENST00000601662.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	42.8978113919839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGCCCCGAGAGGAAACA	-5	True	NA	NA	False	NA	NA	NA	17215345	17217617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215991_17216071_17216168_17216322_17217452
transcript_67656.known	chr19	+	845	8	FSM	ENSG00000053501.14	ENST00000263897.10	845	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.0860649230787	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	6	True	NA	9	True	AATAAA	-16	NA	17215356	17219829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_67657.known	chr19	+	637	7	FSM	ENSG00000053501.14	ENST00000596136.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	45.1678966622189	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	-5	True	NA	9	True	AATAAA	-16	NA	17215389	17219829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_67658.known	chr19	+	1776	5	FSM	ENSG00000053501.14	ENST00000595101.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	22.8623598956888	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	17215387	17218826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452
transcript_67659.known	chr19	+	795	7	NNC	ENSG00000053501.14	novel	845	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	38.8447765686285	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	3	True	NA	9	True	AATAAA	-16	NA	17215397	17219829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216323_17218363_17218392_17219212_17219388_17219630
transcript_6766.nnic	chr1	-	801	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-41	-287693	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTCTGTGTATGC	NA	False	NA	NA	False	AATAAA	-38	NA	82848246	82823696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_82824283_82833947_82834060_82848143
transcript_67660.nnic	chr19	+	978	5	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	-35	0	intron_retention	FALSE	canonical	2	3	junction_1	57.8246271064501	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	NA	False	NA	6	True	AATAAA	-14	NA	17226177	17229215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17226317_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_67662.known	chr19	+	1201	5	FSM	ENSG00000099330.9	ENST00000594283.5	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	20.6397674405503	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTAGACACCTACTG	8	True	NA	-7	True	AATAAA	-1	NA	17226242	17229202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17228802
transcript_67669.nnic	chr19	+	617	3	NIC	ENSG00000099330.9	novel	348	3	NA	NA	-9	0	intron_retention	TRUE	canonical	0	0	junction_1	64	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	0	True	NA	6	True	AATAAA	-14	NA	17226203	17229215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17226354_17228255_17228310_17228802
transcript_67670.known	chr19	-	3289	13	FSM	ENSG00000130307.12	ENST00000252597.8	3289	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	6.19755776271768	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAGACTGAAGCTGGA	10	True	NA	NA	False	AATAAA	-28	NA	17264745	17249170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
transcript_67672.known	chr19	-	2136	12	FSM	ENSG00000130307.12	ENST00000431146.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	10.6948663053474	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATGTTGCATGATTTG	-1	True	NA	0	True	CATAAA	-19	NA	17264724	17250153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264245_17264348_17264670
transcript_67678.known	chr19	+	1472	9	FSM	ENSG00000105393.16	ENST00000359435.8	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	302.187002326374	2721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	NA	False	NA	32	True	AATAAA	-18	NA	17267385	17279337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_67698.known	chr19	+	966	6	FSM	ENSG00000105393.16	ENST00000595632.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	532.416603798191	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTCCTAGGAGGGAAAC	25	False	NA	NA	False	NA	NA	NA	17267501	17279172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_67703.known	chr19	-	2383	4	FSM	ENSG00000160113.6	ENST00000291442.4	2383	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_2	220.834779869476	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGGTCTTTATTTT	1	True	NA	-5	True	AATAAA	-20	NA	17245919	17231882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17232627_17235498_17236066_17240670_17240766_17244942
transcript_67706.known	chr19	+	1366	9	FSM	ENSG00000105393.16	ENST00000601043.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	364.346139508847	2029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	-5	True	NA	32	True	AATAAA	-18	NA	17267442	17279337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17267517_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_67711.known	chr19	+	793	4	FSM	ENSG00000130312.7	ENST00000600434.5	793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	294.174551357976	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTTTTTAATTAGGAAG	21	False	NA	NA	False	NA	NA	NA	17292632	17306543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17292855_17298311_17298378_17305830_17305958_17306165
transcript_67712.known	chr19	-	2042	5	FSM	ENSG00000127220.6	ENST00000247706.4	2042	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	11.2998893799895	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCGGACCTGTGCTGGG	-20	True	NA	-8	True	AATAAA	-18	NA	17303425	17292130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17292832_17294287_17294505_17294674_17294846_17300855_17301625_17303241
transcript_67714.known	chr19	+	863	3	FSM	ENSG00000130312.7	ENST00000595444.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	279.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGAGTTCTTTTG	-3	True	NA	NA	False	NA	NA	NA	17292608	17306655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17292855_17305830_17305958_17306165
transcript_67719.known	chr19	+	4043	5	FSM	ENSG00000130311.11	ENST00000359866.9	4043	5	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_1	40.1932830209228	1371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCGCCTGTTCTGTGTGT	10	True	NA	6	True	AATAAA	-16	NA	17309562	17323298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545
transcript_67720.known	chr19	+	764	2	FSM	ENSG00000130312.7	ENST00000252602.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	5353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATGTGTCATAACTCT	18	True	NA	19	True	AATAAA	-20	NA	17305871	17306843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17305958_17306165
transcript_67721.known	chr19	+	2493	9	FSM	ENSG00000130299.17	ENST00000600625.5	2493	9	0	0	0	0	multi-exon	FALSE	canonical	1	43	junction_4	84.0333825036217	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTACAAATTGTCATT	-14	True	NA	28	True	TATAAA	-15	NA	17337554	17342723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341106_17341323_17341477
transcript_67723.known	chr19	-	879	4	FSM	ENSG00000130303.14	ENST00000527220.2	879	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	326.542833671514	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	21	True	NA	-9	True	AATAAA	-29	NA	17405575	17402938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17405290
transcript_67727.known	chr19	-	1001	5	FSM	ENSG00000130303.14	ENST00000252593.7	1001	5	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_2	51.9488931547151	2634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	1760	False	17405647	-9	True	AATAAA	-29	NA	17405630	17402938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370_17404438_17405290
transcript_67736.known	chr19	+	563	5	FSM	ENSG00000282851.2	ENST00000634577.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.58602010819715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTTAACCCACTGCAGA	0	True	NA	NA	False	NA	NA	NA	17405823	17414468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17405996_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_67737.known	chr19	+	1745	5	FSM	ENSG00000282851.2	ENST00000635176.2	1745	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.58602010819715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGGGCCGAGAGAATT	-2	True	NA	-63	True	AGTAAA	-11	NA	17405821	17415656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17405988_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_67739.known	chr19	+	2070	4	FSM	ENSG00000282851.2	ENST00000635536.2	2070	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.63299316185545	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTCGAAGTGTGGCGTTT	-3	True	NA	10	True	AATAAA	-13	NA	17405693	17415729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17405996_17406076_17406297_17413096_17413306_17414390
transcript_67742.known	chr19	+	1269	4	FSM	ENSG00000282851.2	ENST00000635435.2	1269	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAAAACCCTGCCTGTAC	18	False	NA	NA	False	NA	NA	NA	17405762	17415005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17405988_17406076_17406297_17413096_17413306_17414390
transcript_67749.known	chr19	+	1250	9	FSM	ENSG00000141971.13	ENST00000317040.12	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	35.0657863878739	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	-6	True	NA	19	True	AATAAA	-19	NA	17420046	17425332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_67750.known	chr19	+	511	4	FSM	ENSG00000141971.13	ENST00000528659.5	511	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	170.100623814912	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCCCACCTGAACTTT	-6	True	NA	NA	False	NA	NA	NA	17420046	17421096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17420960
transcript_67751.known	chr19	+	934	4	FSM	ENSG00000141971.13	ENST00000526234.1	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_3	42.7629122799964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAAATAAAGTAGAC	17	True	NA	-15	True	AATAAA	-7	NA	17420121	17422965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331
transcript_67752.known	chr19	-	2031	3	FSM	ENSG00000188051.7	ENST00000341130.6	2031	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGTTACTCAATGTT	3	True	NA	-10	True	AGTAAA	-16	NA	17448668	17435508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17436928_17445198_17445285_17448142
transcript_67753.nnic	chr19	+	921	6	NNC	ENSG00000130313.7	novel	1008	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	181.711859822082	90	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	-31	True	NA	25	True	ATTAAA	-17	NA	17511608	17521288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_17511757_17511883_17511961_17516172_17516281_17517287_17517390_17517709_17517851_17520943
transcript_67754.nic	chr19	+	1636	5	NIC	ENSG00000130313.7	novel	869	4	NA	NA	164	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	194.296648195485	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	180	False	NA	25	True	ATTAAA	-17	NA	17512028	17521288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17512969_17516172_17516281_17517287_17517390_17517709_17517851_17520943
transcript_67757.known	chr19	-	313	2	FSM	ENSG00000269439.7	ENST00000595116.2	359	2	46	0	7	0	multi-exon	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCTCATTCATTTGCA	28	True	NA	NA	False	AATAAA	-35	NA	17511468	17503435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17503623_17511342
transcript_67762.known	chr19	+	3288	7	FSM	ENSG00000130479.11	ENST00000324096.9	3288	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	270.85543499562	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCCTCTCTTCTTTC	-10	True	NA	28	True	AATAAA	-16	NA	17719479	17734513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17719621_17720935_17721038_17724125_17724209_17725048_17725190_17725828_17728173_17733192_17733429_17734272
transcript_67763.nnic	chr19	+	721	4	NIC	ENSG00000130479.11	novel	3288	7	NA	NA	-1	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	365.809908133841	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCCTCTCTTCTTTC	-11	True	NA	28	True	AATAAA	-16	NA	17719478	17734513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17719621_17720935_17721038_17733192_17733429_17734272
transcript_67767.nic	chr19	+	1771	10	ISM	ENSG00000130475.15	ENST00000597512.1	2934	25	15710	-24	-28	0	3prime_fragment	TRUE	canonical	3	200	junction_5	17.3340455694125	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCAGGAAGTATCC	1947	False	NA	13	True	AATAAA	-38	NA	17778412	17788562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_67773.nic	chr19	+	1634	9	NIC	ENSG00000130475.15	novel	2979	27	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	72.2875118882923	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTCCAGGAAGTATCC	0	True	NA	13	True	AATAAA	-38	NA	17778436	17788562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17778885_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_67777.known	chr19	+	3214	29	FSM	ENSG00000130475.15	ENST00000594202.5	3214	29	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_28	79.4728165565344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	7	True	NA	8	True	AATAAA	-33	NA	17747717	17788557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788269
transcript_67778.known	chr19	+	910	5	FSM	ENSG00000130475.15	ENST00000600058.5	910	5	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	20.2113829314077	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTATGGAGGGGCAGTGG	4	True	NA	NA	False	NA	NA	NA	17778440	17783172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016
transcript_67779.known	chr19	+	2692	3	FSM	ENSG00000179913.11	ENST00000318683.7	2692	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCACAGACAGATTCTT	-13	True	NA	NA	False	NA	NA	NA	17795137	17813576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17795207_17807757_17808375_17811570
transcript_67781.nnic	chr19	-	943	3	Fusion	ENSG00000248099.4_ENSG00000105639.20	novel	899	3	NA	NA	-9214	0	multi-exon	FALSE	canonical	2	5	junction_1	10.5	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGCATTTTCTCTAG	30	False	NA	-2	True	AATAAA	-13	NA	17830788	17816513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_17817060_17830107_17830219_17830502
transcript_6779.nnic	chr1	-	455	2	Genic_Genomic	ENSG00000271576.1	novel	1601	1	NA	NA	7	-974	multi-exon	FALSE	canonical	2	5	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCGTTTTTATTAATATA	-8	True	NA	1	True	AATAAA	-18	NA	84077924	84077304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_84077643_84077807
transcript_67794.known	chr19	+	683	5	FSM	ENSG00000105640.13	ENST00000597648.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	8175.55193855436	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	203	False	NA	-59	True	NA	NA	NA	17860124	17863243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17860315_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_678.nic	chr1	-	2836	19	NIC	ENSG00000188976.11	novel	2757	19	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	821	junction_1	220.204198163634	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCTCCTGGAGATT	7658	False	NA	-15	True	AATAAA	-28	NA	959321	944203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_6780.nnic	chr1	-	410	2	Genic_Genomic	ENSG00000271576.1	novel	1601	1	NA	NA	-21	-974	multi-exon	FALSE	canonical	1	4	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCGTTTTTATTAATATA	1	True	NA	1	True	AATAAA	-18	NA	84077952	84077304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_84077643_84077880
transcript_67800.known	chr19	+	634	5	FSM	ENSG00000105640.13	ENST00000222247.10	634	5	0	0	0	0	multi-exon	TRUE	canonical	3	16288	junction_1	2069.0013744558	283851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCATGTTTTCTTTGCAC	7	True	NA	17	True	AATAAA	-22	NA	17859909	17863319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17859975_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_67801.known	chr19	+	1084	4	FSM	ENSG00000105640.13	ENST00000599870.1	1084	4	0	0	0	0	multi-exon	FALSE	canonical	3	20241	junction_3	618.977113201019	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCCCCGGTGCTCGCCGC	841	False	NA	2	True	AATAAA	-7	NA	17860762	17863304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17861473_17862093_17862224_17862917_17863028_17863170
transcript_67802.known	chr19	+	491	6	FSM	ENSG00000105640.13	ENST00000599898.5	491	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	8070.33775253552	5864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCCGCATGTTTTCTTT	10	False	NA	13	True	AATAAA	-18	NA	17859931	17863315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17859975_17861292_17861308_17861424_17861473_17862093_17862224_17862917_17863028_17863170
transcript_67803.known	chr19	+	907	2	FSM	ENSG00000105640.13	ENST00000602216.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	3	16288	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAATACCGGGACCTGAC	31	False	NA	NA	False	NA	NA	NA	17859952	17862177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17859975_17861292
transcript_6781.known	chr1	-	1601	1	FSM	ENSG00000271576.1	ENST00000605506.1	1601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTGCATAATTTG	-15	True	NA	-17	True	AATAAA	-19	NA	84077931	84076330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84076300_84077900
transcript_67814.known	chr19	+	1055	5	FSM	ENSG00000007080.11	ENST00000597436.5	1055	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	815.362802683566	2497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGTGAGTGGGTGGGG	3	False	NA	30	True	AATAAA	-33	NA	17935095	17943991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17935192_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_67815.known	chr19	+	987	5	FSM	ENSG00000007080.11	ENST00000445755.7	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	403.92287320725	7037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCCTAAGTGAGTGG	1	True	NA	24	True	AATAAA	-27	NA	17933014	17943985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17933049_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_67816.known	chr19	+	609	2	FSM	ENSG00000007080.11	ENST00000602080.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGGCTGGGCAGAGTG	9	True	NA	NA	False	NA	NA	NA	17933022	17936992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17933049_17936409
transcript_67818.known	chr19	+	247	2	FSM	ENSG00000105642.16	ENST00000594192.2	247	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCGAGGAGACCCCTGC	895	False	NA	NA	False	NA	NA	NA	17952184	17954653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17952339_17954560
transcript_67819.known	chr19	+	3748	2	FSM	ENSG00000105643.11	ENST00000593460.1	3748	2	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGGCTTCTTGGTTTA	-4	True	NA	7	True	AGTAAA	-14	NA	18008169	18014100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18010730_18012912
transcript_6782.known	chr1	+	4513	10	FSM	ENSG00000142875.20	ENST00000370689.6	4513	10	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_9	19.6299091524473	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGAGTCGTGAATTCT	-10	True	NA	23	True	ATTAAA	-23	NA	84078061	84238498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84214152_84214318_84235179
transcript_67823.known	chr19	+	988	7	FSM	ENSG00000216490.4	ENST00000407280.4	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	16.9844700306551	784	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGGATGGTGTAATTA	8	True	NA	NA	False	AGTAAA	-16	NA	18173812	18178117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18173974_18175039_18175223_18175310_18175386_18175604_18175698_18177139_18177293_18177710_18177765_18177848
transcript_67825.known	chr19	+	1578	5	FSM	ENSG00000254858.10	ENST00000599612.3	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_3	8.73212459828649	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCACCAAAAGAGAAAA	4	True	NA	NA	False	NA	NA	NA	18193217	18196948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18193469_18193863_18194035_18194776_18194854_18194957_18195087_18195998
transcript_67829.known	chr19	-	1496	5	FSM	ENSG00000105649.10	ENST00000222256.9	1496	5	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_3	15.116216457831	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGGGTCCTGCCCACCC	-2	True	NA	-7	True	AATAAA	-32	NA	18204042	18196783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18202512_18202741_18203895
transcript_67830.known	chr19	-	1253	4	FSM	ENSG00000105649.10	ENST00000464076.3	1253	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	45.4386032649185	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCCCTGTGAGCACC	-2	True	NA	-22	True	AATAAA	-17	NA	18204042	18196798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18203895
transcript_67833.known	chr19	-	619	4	FSM	ENSG00000284797.1	ENST00000596647.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGGGACCATGTCTTT	1	True	NA	NA	False	AAAACA	-43	NA	18255351	18249949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18250178_18250311_18250473_18252063_18252162_18255219
transcript_67834.known	chr19	+	415	3	FSM	ENSG00000268650.3	ENST00000599416.2	415	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGTGCATAGGTTCAA	4350	False	NA	NA	False	AATAAA	-15	NA	18204733	18209046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18204900_18208289_18208430_18208937
transcript_67836.known	chr19	+	267	2	FSM	ENSG00000268650.3	ENST00000596473.1	267	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCATTCTCCCTGCCCTC	4357	False	NA	9	True	AATAAA	-12	NA	18204740	18205563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18204900_18205455
transcript_67838.known	chr19	-	986	4	FSM	ENSG00000130520.11	ENST00000252816.10	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	1833.29775723058	2582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTCCTTTTGAGCT	11	True	NA	-16	True	AATAAA	-26	NA	18323071	18306906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18323017
transcript_6784.known	chr1	+	1905	9	FSM	ENSG00000142875.20	ENST00000370688.7	1905	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	48.8042966858452	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATCCTTATATTTA	1	True	NA	NA	False	ATTAAA	-20	NA	84078143	84205439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204481
transcript_67841.known	chr19	-	1704	5	FSM	ENSG00000130520.11	ENST00000593829.6	1704	5	0	0	0	0	multi-exon	FALSE	canonical	3	3376	junction_4	358.518479300579	2503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTCTTGAGTCTTCA	6	True	NA	-12	True	AATAAA	-20	NA	18323076	18306235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18316023_18316066_18323017
transcript_67842.known	chr19	-	1113	6	FSM	ENSG00000130520.11	ENST00000600289.6	1113	6	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_2	1898.49213851414	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACATCCACTGTTCC	57	False	NA	-25	True	AATAAA	-17	NA	18323060	18306915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18307556_18309677_18309862_18310109_18310215_18312603_18312703_18316023_18316066_18323017
transcript_67843.known	chr19	-	807	4	FSM	ENSG00000130520.11	ENST00000594828.7	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	3376	junction_3	412.637317211562	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGGCCATCTGTAG	5	True	NA	NA	False	CATAAA	-14	NA	18323112	18309290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18309862_18312603_18312703_18316023_18316066_18323017
transcript_67847.known	chr19	+	7081	5	FSM	ENSG00000130517.14	ENST00000269919.11	7081	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	6.34428877022476	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTCCTGTGTGTCCTT	-2	True	NA	12	True	AATAAA	-17	NA	18340597	18369950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363390
transcript_67848.nic	chr19	+	760	5	NIC	ENSG00000130517.14	novel	7081	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	8.4372685153431	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACACTTGAAATACGCA	-16	True	NA	-8	True	GGGGCT	-42	NA	18340583	18369930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18369705
transcript_67854.known	chr19	+	545	4	FSM	ENSG00000130517.14	ENST00000597431.2	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	6.23609564462324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGATCTGGAAGAGAGATTC	1	True	NA	NA	False	NA	NA	NA	18340638	18363688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18363390
transcript_67855.nnic	chr19	+	545	4	NIC	ENSG00000130517.14	novel	762	4	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	10.8012344973464	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACATTTCCTGTGTGTCC	-16	True	NA	10	True	AATAAA	-15	NA	18340583	18369948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_18340716_18342858_18342912_18355894_18356012_18369705
transcript_67858.known	chr19	+	793	3	FSM	ENSG00000130511.16	ENST00000599699.2	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	0.5	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	8	True	NA	20	True	AATAAA	-26	NA	18433274	18434562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18433614_18433709_18433818_18434216
transcript_67860.known	chr19	-	2252	11	FSM	ENSG00000105655.19	ENST00000338128.13	2252	11	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	102.318180202738	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	1	True	NA	-18	True	AATAAA	-13	NA	18438133	18434387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437598_18437761_18437859_18437989_18438092
transcript_67861.known	chr19	-	1703	10	FSM	ENSG00000105655.19	ENST00000457269.8	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_8	236.78119294685	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	8299	False	NA	-29	True	AATAAA	-27	NA	18438167	18434808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437859_18437989_18438092
transcript_67862.known	chr19	-	1466	9	FSM	ENSG00000105655.19	ENST00000577820.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_7	254.641138418363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGAAGGCCCCCACA	8351	False	NA	-81	True	NA	NA	NA	18438115	18434860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859_18437989_18438092
transcript_67863.known	chr19	-	696	3	FSM	ENSG00000105655.19	ENST00000582287.6	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_2	23	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCACCTGGGGTTCTTGG	8217	False	NA	-35	True	AATAAA	-21	NA	18435737	18434814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562
transcript_67864.known	chr19	-	623	2	FSM	ENSG00000105656.13	ENST00000596915.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGCGCATGCCAGGGA	-3	True	NA	NA	False	NA	NA	NA	18522067	18472406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18472883_18521920
transcript_67865.known	chr19	-	3970	12	FSM	ENSG00000105656.13	ENST00000262809.9	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	10.0395910489298	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCAGCCCAGGCTGCCT	-6	True	NA	-6	True	AATAAA	-16	NA	18522070	18442662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18444869_18445223_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18521920
transcript_67869.known	chr19	-	1756	9	FSM	ENSG00000105701.16	ENST00000596558.6	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_8	889.330919497911	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	4	True	NA	-10	True	AATAAA	-17	NA	18542972	18531761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
transcript_6787.nnic	chr1	+	1097	2	NNC	ENSG00000142875.20	novel	1905	9	NA	NA	17	-52689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTCTAAGTAGACTTTG	7	True	NA	NA	False	NA	NA	NA	84078078	84131357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_84078372_84130553
transcript_6788.known	chr1	+	1567	4	FSM	ENSG00000203943.9	ENST00000370673.7	1567	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.02768199119819	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	NA	False	NA	24	True	AATAAA	-17	NA	84298365	84350798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84298568_84303202_84303288_84325636_84325749_84349630
transcript_67889.known	chr19	-	1781	9	FSM	ENSG00000105701.16	ENST00000597960.7	1781	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1035.05023277858	3148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTTTCTTCTCCCG	-5	True	NA	1	True	AATAAA	-28	NA	18543577	18531750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18543481
transcript_6789.nnic	chr1	+	1365	3	NIC	ENSG00000203943.9	novel	1567	4	NA	NA	117	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	0	True	NA	24	True	AATAAA	-17	NA	84298482	84350798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_84298568_84325636_84325749_84349630
transcript_67890.known	chr19	-	1292	6	FSM	ENSG00000105701.16	ENST00000544835.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1565.79978285859	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-1	True	NA	0	True	AATAAA	-27	NA	18543573	18531751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18541678_18541996_18543485
transcript_67891.known	chr19	-	1710	9	FSM	ENSG00000105701.16	ENST00000222308.8	1710	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1108.21398401888	1623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	529	False	NA	-10	True	AATAAA	-17	NA	18543524	18531761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543485
transcript_67892.known	chr19	-	1548	8	FSM	ENSG00000105701.16	ENST00000601844.5	1548	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1346.71414175089	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCAGGTTCCCTCCCC	-5	True	NA	-62	True	NA	NA	NA	18543577	18531813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18541678_18541996_18543481
transcript_67901.known	chr19	+	656	6	FSM	ENSG00000105700.11	ENST00000600372.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	391.365506911378	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGACACCAGCCCCG	22	False	NA	NA	False	NA	NA	NA	18557805	18568495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18557915_18560419_18560551_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_6791.known	chr1	+	1948	9	FSM	ENSG00000117133.11	ENST00000370654.6	1948	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	22.5662219921723	1713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGCCAGTGTATATAAA	2	True	NA	20	True	AATAAA	-27	NA	84479265	84498352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84479510_84480955_84481013_84482914_84482996_84489632_84489729_84490318_84490473_84495372_84495456_84495881_84496064_84496243_84496371_84497428
transcript_67913.known	chr19	+	1496	5	FSM	ENSG00000105700.11	ENST00000539106.5	1496	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	348.943673821435	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTTCTTCAGTCCT	NA	False	NA	34	True	AATAAA	-36	NA	18557761	18569387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18557950_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_67914.known	chr19	+	1344	5	FSM	ENSG00000105700.11	ENST00000222307.9	1344	5	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_1	108.273669467697	2237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	-7	True	NA	25	True	AATAAA	-27	NA	18557869	18569378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_67915.known	chr19	+	1327	6	FSM	ENSG00000105700.11	ENST00000601630.5	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	373.736591732734	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCGATGTTTACAGATG	-1	True	NA	-43	True	NA	NA	NA	18557875	18569310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18565133_18565191_18567131_18567179_18568401
transcript_67916.known	chr19	+	517	3	FSM	ENSG00000105700.11	ENST00000600099.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	437.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCTGTCATCCAGGG	606	False	NA	NA	False	NA	NA	NA	18562090	18568698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18562158_18564868_18565022_18568401
transcript_67918.known	chr19	+	779	6	FSM	ENSG00000221983.8	ENST00000595683.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2809.32480144251	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	11	True	NA	42	True	AATAAA	-30	NA	18571874	18575242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18571910_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_67919.known	chr19	+	764	6	FSM	ENSG00000221983.8	ENST00000596273.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2813.21656471733	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGCAATTGGTGTC	-9	True	NA	29	True	AATAAA	-17	NA	18571854	18575229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18571888_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_67922.known	chr19	+	554	5	FSM	ENSG00000221983.8	ENST00000596304.5	554	5	0	0	0	0	multi-exon	FALSE	canonical	2	89	junction_1	2456.95024369644	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAATAAAGTGTCCCTT	-9	True	NA	2	True	NA	NA	NA	18571729	18575202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18571837_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_67924.known	chr19	+	668	5	FSM	ENSG00000221983.8	ENST00000598780.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	2431.59396024501	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTCCTGCCCAGGCCC	63	False	NA	-30	True	NA	NA	NA	18571926	18575170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18572180_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_67925.known	chr19	+	743	5	FSM	ENSG00000221983.8	ENST00000595158.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	2434.17238245363	6036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAATTGGTGTCCTCAT	18	False	NA	34	True	AATAAA	-22	NA	18571881	18575234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18572146_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_67927.known	chr19	+	702	5	FSM	ENSG00000006015.18	ENST00000450195.6	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	205.64821297546	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	-6	True	NA	14	True	AATAAA	-16	NA	18588795	18592336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18588901_18588994_18589078_18589478_18589684_18590853_18590934_18592107
transcript_67930.known	chr19	+	491	4	FSM	ENSG00000006015.18	ENST00000601736.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	247.140086230911	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	0	True	NA	14	True	AATAAA	-16	NA	18588801	18592336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18588901_18588994_18589078_18590853_18590934_18592107
transcript_67938.known	chr19	-	1741	9	FSM	ENSG00000006016.12	ENST00000392386.8	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	12.6682427747498	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-7	True	NA	-4	True	AATAAA	-17	NA	18606799	18593236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18593580_18594064_18594108_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
transcript_67940.known	chr19	+	514	4	FSM	ENSG00000221983.8	ENST00000597451.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	5361	junction_3	344.891287219611	12332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	1401	False	NA	41	True	AATAAA	-29	NA	18573264	18575241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18573404_18573661_18573749_18574869_18574973_18575056
transcript_67941.known	chr19	+	572	5	FSM	ENSG00000221983.8	ENST00000430157.6	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	2590	junction_1	1388.27417591051	38332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	63	False	NA	41	True	AATAAA	-29	NA	18571801	18575241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18571888_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_67942.known	chr19	+	707	5	FSM	ENSG00000221983.8	ENST00000599551.5	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	2420.85098673999	11654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	876	False	NA	41	True	AATAAA	-29	NA	18572739	18575241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18572961_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_67943.known	chr19	+	508	3	FSM	ENSG00000221983.8	ENST00000596272.5	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	5616	junction_2	285	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	54	False	NA	41	True	AATAAA	-29	NA	18573354	18575241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18573404_18573661_18573749_18574869
transcript_67944.known	chr19	+	767	5	FSM	ENSG00000006015.18	ENST00000358607.11	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	102.146952964834	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCTGCCATCTCTGTG	-4	True	NA	15	True	AATAAA	-17	NA	18588797	18592337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18588901_18588994_18589078_18589412_18589684_18590853_18590934_18592107
transcript_67952.known	chr19	-	2094	6	FSM	ENSG00000223802.9	ENST00000429504.6	2094	6	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	25.2222124326951	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTCGAGCTGGTAT	2	True	NA	-4	True	AATAAA	-22	NA	18896135	18877908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18879040_18879240_18879389_18880273_18880436_18884086_18884268_18893415_18893576_18895823
transcript_67953.known	chr19	+	1691	13	FSM	ENSG00000105671.12	ENST00000602113.5	1691	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	51.4837487843386	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCAGTCTGACTTTCG	21	True	NA	22	True	AATAAA	-13	NA	18919737	18928622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18919857_18920650_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_67961.known	chr19	-	1607	10	FSM	ENSG00000051128.19	ENST00000542541.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	143.321274255851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGGCTGGTTTTCTATG	0	True	NA	NA	False	NA	NA	NA	18940304	18929442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18939850
transcript_67962.known	chr19	-	1418	10	FSM	ENSG00000051128.19	ENST00000433218.6	1418	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	183.427921727135	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGGTATGTGG	872	False	NA	-14	True	NA	NA	NA	18940352	18929200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18929626_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18940320
transcript_67972.known	chr19	+	1665	3	FSM	ENSG00000269019.2	ENST00000601106.2	1665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGAAACCCTGTCTCT	NA	False	NA	NA	False	NA	NA	NA	18940234	18947452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18940625_18946080_18946229_18946325
transcript_67975.known	chr19	-	1131	10	FSM	ENSG00000105669.14	ENST00000262812.9	1131	10	0	0	0	0	multi-exon	TRUE	canonical	3	2182	junction_7	247.864259944883	10646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-13	True	NA	-2	True	AATAAA	-29	NA	18919387	18899513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_67976.known	chr19	-	261	2	FSM	ENSG00000105669.14	ENST00000600528.1	261	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	6552	False	NA	-2	True	AATAAA	-29	NA	18899937	18899513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899710_18899872
transcript_67977.known	chr19	-	907	9	FSM	ENSG00000105669.14	ENST00000351079.8	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	917.587019034162	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCAGCACCCCCAT	-1	True	NA	-61	True	NA	NA	NA	18919375	18899572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
transcript_67978.known	chr19	-	948	9	FSM	ENSG00000105669.14	ENST00000349893.8	948	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	869.002652110452	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	11	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_67979.known	chr19	-	1144	11	FSM	ENSG00000105669.14	ENST00000600932.5	1144	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	1124.541635512	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-6	True	NA	-51	True	NA	NA	NA	18919380	18899562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18905866_18905936_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_67980.known	chr19	+	1793	13	FSM	ENSG00000105671.12	ENST00000247003.9	1793	13	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_8	11.5674351329738	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTTTCGAAGAGCAG	-2	True	NA	30	True	AATAAA	-21	NA	18919714	18928630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18919857_18920579_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_67981.known	chr19	+	1882	14	FSM	ENSG00000105671.12	ENST00000595858.5	1882	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	75.6396783886973	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGACTTTCGAAGA	10	True	NA	26	True	AATAAA	-17	NA	18919726	18928626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924852_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_67983.known	chr19	-	3640	11	FSM	ENSG00000064607.17	ENST00000337018.10	3640	11	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	47.665081558726	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	317	False	NA	-13	True	AATAAA	-16	NA	19033559	18990892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_67986.known	chr19	-	6189	11	FSM	ENSG00000064607.17	ENST00000452918.7	6189	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	86.3421102359677	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-6	True	NA	-13	True	AATAAA	-16	NA	19033517	18990892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18993741_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_67991.known	chr19	+	2461	9	FSM	ENSG00000105676.14	ENST00000535612.6	2461	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	152.687129041711	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	-10	True	NA	20	True	AATAAA	-21	NA	19033602	19058176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_67992.nnic	chr19	+	2416	8	NNC	ENSG00000105676.14	novel	2383	8	NA	NA	-20	-8	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_7	165.501341014359	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAGCGGAGGGGTCTCTT	863	False	NA	12	True	AATAAA	-13	NA	19033554	19058168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057392
transcript_67993.known	chr19	+	2383	8	FSM	ENSG00000105676.14	ENST00000392335.6	2383	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	59.1801124896338	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTCTTCCATAGCTTG	883	False	NA	22	True	AATAAA	-23	NA	19033574	19058178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_67995.known	chr19	+	2412	8	FSM	ENSG00000105676.14	ENST00000269932.10	2412	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	136.592048652555	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	-3	True	NA	3	True	AATAAA	-4	NA	19033609	19058159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19034014_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_67999.nnic	chr19	+	1103	5	NNC	ENSG00000105676.14	novel	1252	6	NA	NA	-3	-1568	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	169.151559259736	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	-31	True	NA	3	True	AATAAA	-14	NA	19033581	19050061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19049665
transcript_68.known	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00160_+_0_700
transcript_68001.nnic	chr19	+	1022	4	NNC	ENSG00000105676.14	novel	1318	5	NA	NA	-20	-1568	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	190.571654648732	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	863	False	NA	3	True	AATAAA	-14	NA	19033554	19050061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19033931_19042710_19042878_19043991_19044075_19049665
transcript_68003.nnic	chr19	+	811	4	NNC	ENSG00000105676.14	novel	552	5	NA	NA	-12	-1568	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	195.040736485712	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	17	False	NA	3	True	AATAAA	-14	NA	19033848	19050061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19034014_19042710_19042878_19043991_19044075_19049665
transcript_68008.known	chr19	-	4169	12	FSM	ENSG00000064607.17	ENST00000594773.5	4169	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	181.863994228363	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGGTCTCCATGGCTG	15	True	NA	-10	True	AATAAA	-19	NA	19033816	18990889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18991150_18993647_18993741_18994365_18995281_19001612_19001675_19004167_19004274_19004429_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033761
transcript_68011.known	chr19	-	536	2	FSM	ENSG00000064607.17	ENST00000597095.5	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	NA	False	NA	-13	True	AATAAA	-16	NA	18991618	18990892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18991150_18991339
transcript_68012.known	chr19	+	1320	3	FSM	ENSG00000105676.14	ENST00000540634.2	1320	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTGCCTTATCTGTC	3739	False	NA	NA	False	NA	NA	NA	19055897	19060311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19055929_19057415_19057659_19059265
transcript_68017.nic	chr19	+	921	2	ISM	ENSG00000181035.14	ENST00000594070.5	1228	5	9530	0	-390	0	3prime_fragment	FALSE	canonical	3	37	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9471	False	NA	NA	False	AATAGA	-18	NA	19105472	19106934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_19105728_19106268
transcript_68019.nic	chr19	-	1793	12	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	107.827379647532	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-25	True	NA	-3	True	AATAAA	-25	NA	19138497	19119614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138456
transcript_6802.known	chr1	-	6571	7	FSM	ENSG00000117151.13	ENST00000370630.6	6571	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	13.4339950209244	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGGCTGTCTCAAAAAA	6	True	NA	-3	True	AATAAA	-20	NA	84574440	84549610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84574238
transcript_68020.nic	chr19	-	1847	12	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_11	107.827379647532	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19	True	NA	-3	True	AATAAA	-25	NA	19138491	19119614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134917_19138425
transcript_68023.nic	chr19	-	1714	11	NIC	ENSG00000064545.15	novel	2251	12	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_10	109.2426656577	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19	True	NA	-3	True	AATAAA	-25	NA	19138491	19119614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19138425
transcript_68036.known	chr19	-	1754	12	FSM	ENSG00000064545.15	ENST00000587985.6	1754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	112.893718760333	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCATGCCGATTTTTAC	10	True	NA	-28	True	NA	NA	NA	19138462	19119639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121317_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_68037.known	chr19	-	1654	12	FSM	ENSG00000064545.15	ENST00000587583.6	1654	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	108.452830894014	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTTCTGAACAAATAA	25	True	NA	-48	True	NA	NA	NA	19138447	19119659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132434_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_68038.known	chr19	-	1923	11	FSM	ENSG00000064545.15	ENST00000587406.5	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_10	48.2344275388441	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-21	True	NA	-3	True	AATAAA	-25	NA	19138493	19119614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_68039.known	chr19	+	1376	10	FSM	ENSG00000064490.14	ENST00000303088.9	1376	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	102.301056557787	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	3	True	NA	22	True	AATAAA	-15	NA	19192257	19201866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_68045.known	chr19	+	1325	9	FSM	ENSG00000064490.14	ENST00000456252.7	1325	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	138.274862140593	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	-12	True	NA	22	True	AATAAA	-15	NA	19192242	19201866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_68047.known	chr19	+	1212	9	FSM	ENSG00000064490.14	ENST00000407360.7	1212	9	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	70.5775282933598	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGACAGGTGGTGGG	508	False	NA	-42	True	NA	NA	NA	19192762	19201802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_68048.nic	chr19	+	1314	9	NIC	ENSG00000064490.14	novel	1376	10	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	230	junction_2	40.2212630333758	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	467	False	NA	22	True	AATAAA	-15	NA	19192721	19201866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_6805.known	chr1	-	2892	6	FSM	ENSG00000117151.13	ENST00000477677.5	2892	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	21.9581419979014	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGATTGTAGAGATGTAT	-34	True	NA	-3	True	AATAAA	-23	NA	84574480	84553120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84574238
transcript_68062.known	chr19	+	1059	8	FSM	ENSG00000064490.14	ENST00000392324.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	119.481533027886	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	84	False	NA	22	True	AATAAA	-15	NA	19192910	19201866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_68072.known	chr19	-	877	6	FSM	ENSG00000254901.8	ENST00000494489.6	877	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	74.1862520956545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGAACATTGTGTGGA	NA	False	NA	-106	True	NA	NA	NA	19192588	19177007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192529
transcript_68076.known	chr19	+	919	3	FSM	ENSG00000064490.14	ENST00000543157.7	919	3	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	56.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCCACCTCGTCCCCA	19	False	NA	NA	False	NA	NA	NA	19192845	19197434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19193101_19193938_19194134_19196965
transcript_68077.known	chr19	-	1683	8	FSM	ENSG00000213999.17	ENST00000409224.5	1683	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	17.9398086582293	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACTGTGACTCGCCTCA	-3	True	NA	-6	True	AATAAA	-25	NA	19170263	19145567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149216_19149430_19150681_19150765_19170204
transcript_68078.known	chr19	-	992	6	FSM	ENSG00000254901.8	ENST00000462790.8	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	32.9933326597966	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	-9	True	NA	-4	True	NA	NA	NA	19192152	19176905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_68079.known	chr19	-	801	4	FSM	ENSG00000254901.8	ENST00000585679.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	54.3507129668048	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	4	True	NA	-4	True	NA	NA	NA	19192139	19176905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19192080
transcript_68080.known	chr19	-	1489	4	FSM	ENSG00000254901.8	ENST00000477565.3	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	9.67241208569794	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACTCATGTGCCAGGA	NA	False	NA	-9	True	AATAAA	-13	NA	19192589	19181881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19182684_19186033_19186099_19186892_19187006_19192080
transcript_68081.known	chr19	+	389	3	FSM	ENSG00000064490.14	ENST00000540977.1	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	11	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTTTGCTGTGCTTCCC	4700	False	NA	25	True	AATAAA	-18	NA	19198636	19201869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19198724_19199153_19199235_19201648
transcript_68082.known	chr19	-	859	6	FSM	ENSG00000184162.15	ENST00000420605.7	859	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.2363857861548	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAATGTGTGAATTGTG	44	True	NA	-7	True	TATAAA	-15	NA	19203357	19201415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19201564_19201930_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_68083.known	chr19	-	1290	5	FSM	ENSG00000184162.15	ENST00000331552.12	1290	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.5452186216786	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTGTGACTTTCA	-13	True	NA	0	True	TATAAA	-22	NA	19203414	19201408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_68084.known	chr19	-	424	3	FSM	ENSG00000254901.8	ENST00000591398.1	424	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	10	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTCTGGTGACCTC	5541	False	NA	-2	True	NA	NA	NA	19187027	19182459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19182684_19186033_19186099_19186892
transcript_68086.known	chr19	-	1518	10	FSM	ENSG00000213996.13	ENST00000389363.5	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	11.3311544746506	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGCCTAAGTGTTTC	-22	True	NA	-2	True	AGTAAA	-21	NA	19273301	19264365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19268629_19268755_19269686_19269770_19270172_19270277_19270344_19270443_19271021_19271126_19273120
transcript_68095.known	chr19	-	2566	14	FSM	ENSG00000105705.16	ENST00000247001.10	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_9	55.3902774883525	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGGCTAAAGGAATGTCA	-6	True	NA	NA	False	AATAAA	-19	NA	19320509	19276032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264_19302389_19303347_19303449_19303723_19303848_19305848_19306077_19310096_19310201_19316421_19316594_19320462
transcript_68106.known	chr19	-	1377	8	FSM	ENSG00000105705.16	ENST00000591007.6	1377	8	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_6	39.0488966109237	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATGCCTGGTCCTGTTGC	NA	False	NA	-3	True	AATAAA	-21	NA	19302455	19276512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19276675_19276946_19277077_19277733_19277880_19278689_19278797_19279212_19279391_19280184_19280292_19296988_19297345_19302264
transcript_68110.known	chr19	+	1166	5	FSM	ENSG00000186010.19	ENST00000502506.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3695.07510072529	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGTTTTCCTGGGG	-8	True	NA	22	True	AATAAA	-16	NA	19515735	19528197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19516333_19526024_19526261_19527280_19527353_19527700_19527771_19528006
transcript_68119.known	chr19	+	521	5	FSM	ENSG00000186010.19	ENST00000507754.9	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	8400	junction_3	131.575073627188	50332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTTCCTGGGGA	-4	True	NA	23	True	AATAAA	-17	NA	19516224	19528198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006
transcript_68121.known	chr19	-	727	2	FSM	ENSG00000105717.14	ENST00000558276.7	727	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTTGCCAGATTTGT	1107	False	NA	2	True	ATTAAA	-25	NA	19563824	19561706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19562118_19563508
transcript_68123.known	chr19	-	2546	6	FSM	ENSG00000064547.14	ENST00000542587.5	2546	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	97.6635039305881	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	8618	False	NA	-33	True	AGTAAA	-16	NA	19628930	19623668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628168_19628427
transcript_68126.nnic	chr19	-	1887	4	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	106.032489779732	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	8985	False	NA	-33	True	AGTAAA	-16	NA	19628563	19623668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19624570_19626542_19627285_19627396_19627505_19628427
transcript_68129.nic	chr19	-	1781	3	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	131	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	8983	False	NA	-33	True	AGTAAA	-16	NA	19628565	19623668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19624570_19626542_19627285_19628427
transcript_6813.known	chr1	+	563	2	FSM	ENSG00000122432.18	ENST00000484939.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTATATCAGTTCGCA	7830	False	NA	NA	False	NA	NA	NA	84506299	84507320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84506419_84506876
transcript_68134.known	chr19	-	1786	3	FSM	ENSG00000064547.14	ENST00000407877.8	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	99.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	0	True	NA	-19	True	AGTAAA	-30	NA	19628220	19623654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19624570_19626542_19627285_19628091
transcript_68135.known	chr19	-	595	2	FSM	ENSG00000064547.14	ENST00000590629.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTATTAGTAGGTAAGAA	-1	True	NA	NA	False	NA	NA	NA	19628221	19627504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19627970_19628091
transcript_6814.known	chr1	+	383	2	FSM	ENSG00000122432.18	ENST00000468437.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTTAGTATTTCC	-5	True	NA	14	True	AATAAA	-24	NA	84506381	84507001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84506419_84506655
transcript_68140.nnic	chr19	+	902	5	NNC	ENSG00000181896.12	novel	1830	5	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	23.4454153300811	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTATCCCAGTTGTTTTC	-14	True	NA	9	True	AATAAA	-15	NA	19668821	19680029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180_19679506_19679785
transcript_68142.nnic	chr19	+	2019	5	NNC	ENSG00000181896.12	novel	1552	5	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.7032386540712	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCTTCTGTTCATTATT	5031	False	NA	23	True	AATAAA	-23	NA	19668766	19683509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180_19680359_19683056
transcript_68143.nnic	chr19	+	1340	5	NNC	ENSG00000181896.12	novel	1830	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	23.2849200127464	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	-9	True	NA	12	True	AATAAA	-18	NA	19668784	19680032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19668967_19675182_19675301_19677863_19677991_19678725_19678787_19679180
transcript_68145.known	chr19	+	1152	4	FSM	ENSG00000181896.12	ENST00000444249.6	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	17.1075032271418	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	15	True	NA	12	True	AATAAA	-18	NA	19668850	19680032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19668967_19677863_19677987_19678725_19678787_19679180
transcript_68147.known	chr19	+	575	3	FSM	ENSG00000181896.12	ENST00000541458.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCCCAATTTATTTCA	2	True	NA	NA	False	NA	NA	NA	19668795	19679523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19668967_19678725_19678787_19679180
transcript_68149.known	chr19	-	2963	4	FSM	ENSG00000105708.9	ENST00000344099.4	2963	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	1.63299316185545	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATAACATTTTTCTT	-7	True	NA	-21	True	AATAAA	-15	NA	19733112	19710471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19713090_19714090_19714152_19714360_19714488_19732955
transcript_68153.nnic	chr19	+	822	4	NNC	ENSG00000267419.3	novel	803	5	NA	NA	-37	5496	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	8.04155872120988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTATATTTTCTGAAAGAT	NA	False	NA	20	True	AATAAA	-16	NA	19776548	19793603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19776995_19786608_19786692_19788949_19789073_19793433
transcript_68154.nnic	chr19	+	844	4	NNC	ENSG00000267419.3	novel	803	5	NA	NA	-37	5499	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	6.18241233033047	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTTCTGAAAGATTTT	NA	False	NA	23	True	AATAAA	-19	NA	19776548	19793606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19776995_19786608_19786692_19789679_19789822_19793433
transcript_68157.known	chr19	-	1007	4	FSM	ENSG00000081665.14	ENST00000545006.1	1007	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	27.0678160675491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTATCTTTGTGTCT	10	True	NA	NA	False	AATAAA	-13	NA	19821722	19798788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19799451_19806030_19806127_19806941_19807069_19821600
transcript_68158.nic	chr19	-	1108	4	ISM	ENSG00000081665.14	ENST00000590766.5	429	5	-74	812	-33	-812	5prime_fragment	FALSE	canonical	0	0	junction_1	28.003967972811	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCCAGGTGCAGTGGCT	-1	True	NA	NA	False	AATAAA	-25	NA	19821784	19791783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_19792485_19806030_19806127_19806941_19807069_19821600
transcript_68159.known	chr19	-	3323	4	FSM	ENSG00000081665.14	ENST00000540806.7	3323	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	4.32049379893857	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCAGAGTAATAGTTT	-18	True	NA	NA	False	AATAAA	-16	NA	19821750	19792710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19795661_19806030_19806127_19806941_19807069_19821600
transcript_6816.known	chr1	-	5752	14	FSM	ENSG00000117155.17	ENST00000342203.8	5752	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	36.7101230738154	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTGGAATGAATG	-3	True	NA	NA	False	AATACA	-17	NA	84690461	84643705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
transcript_68160.nnic	chr19	-	1323	4	NNC	ENSG00000081665.14	novel	1007	4	NA	NA	-33	7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	26.59991645768	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTGTGTCTTAATTTC	-1	True	NA	NA	False	AATAAA	-20	NA	19821784	19798781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_19799698_19806030_19806127_19806941_19807069_19821600
transcript_68161.known	chr19	-	432	3	FSM	ENSG00000266904.7	ENST00000589508.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGAATCACTTTATAG	19	False	NA	NA	False	AATACA	-24	NA	19776385	19761157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19761422_19762537_19762647_19776326
transcript_68162.nnic	chr19	+	578	3	FSM	ENSG00000267419.3	ENST00000684916.1	606	3	22	6	1	-6	multi-exon	FALSE	canonical	0	0	junction_2	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTGCATGGCCTGGGAAG	20	True	NA	NA	False	AATAAA	-11	NA	19776612	19788101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19776995_19786608_19786692_19787988
transcript_68163.nnic	chr19	+	704	3	NNC	ENSG00000267419.3	novel	606	3	NA	NA	-37	5501	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	7.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTGAAAGATTTTTT	NA	False	NA	25	True	AATAAA	-21	NA	19776548	19793608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19776995_19786608_19786692_19793433
transcript_68169.known	chr19	+	447	2	FSM	ENSG00000267419.3	ENST00000586924.2	709	2	238	24	188	-24	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAAAATCAGTGAGA	-5	True	NA	NA	False	AATAAA	-4	NA	19776823	19786884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19776995_19786608
transcript_68171.known	chr19	-	306	2	FSM	ENSG00000266904.7	ENST00000586816.1	306	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATCCTGTTGATGAATG	10	True	NA	NA	False	ATTAAA	-19	NA	19776394	19771571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19771806_19776322
transcript_68173.known	chr19	-	562	2	FSM	ENSG00000081665.14	ENST00000595825.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGGAATCTGGGGACT	-18	True	NA	NA	False	AATACA	-25	NA	19821750	19820254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19820667_19821600
transcript_68184.nnic	chr19	-	616	3	Antisense	novelGene_ENSG00000270325.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTTGTGGAGTTTCTCT	-4	False	NA	-2	True	AATAAA	-19	NA	19861226	19856140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_19856429_19859155_19859320_19861062
transcript_68196.nnic	chr19	+	607	4	NNC	ENSG00000256771.5	novel	3542	4	NA	NA	-73	-4097	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	78.2403703694937	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTGACTGGAAAGAT	NA	False	NA	NA	False	AATAAA	-18	NA	19865808	19887986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19878480_19878608_19880050_19880147_19887793
transcript_68197.known	chr19	+	3542	4	FSM	ENSG00000256771.5	ENST00000589717.2	3542	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	16.062378404209	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGTTTCAGAGTAATG	-6	True	NA	NA	False	GATAAA	-7	NA	19865881	19894674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473
transcript_68204.known	chr19	+	820	3	FSM	ENSG00000256771.5	ENST00000592725.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	67	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAGAAACCCTACAAAT	-2	True	NA	NA	False	NA	NA	NA	19865885	19892083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19866000_19880050_19880147_19891473
transcript_68209.known	chr19	+	297	2	FSM	ENSG00000256771.5	ENST00000589668.1	297	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGTGGTAGAATTACA	5	True	NA	NA	False	NA	NA	NA	19865917	19878695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19866000_19878480
transcript_68211.nnic	chr19	+	438	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-65	-6313	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCCTTTTGATTATC	0	True	NA	8	True	AATAAA	-19	NA	19865816	19872382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19872127
transcript_68213.nnic	chr19	+	709	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-65	-6042	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTGTCCCTGTTTTGT	0	True	NA	NA	False	AATAAA	-29	NA	19865816	19872653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19872127
transcript_68214.nnic	chr19	+	846	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-65	-5905	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGTGTCAGCTTTT	0	True	NA	NA	False	AATAAA	-14	NA	19865816	19872790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19872127
transcript_68215.known	chr19	+	2268	2	FSM	ENSG00000256771.5	ENST00000355650.4	2268	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGCCTACTCACATCTT	-6	True	NA	20	True	AATACA	-19	NA	19865906	19893648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19866000_19891473
transcript_68222.known	chr19	+	570	3	FSM	ENSG00000184635.16	ENST00000588146.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	155	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAACCCTTATAACACATA	-3	True	NA	NA	False	NA	NA	NA	19900945	19933509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19916559_19916656_19933181
transcript_68224.known	chr19	+	2763	4	FSM	ENSG00000184635.16	ENST00000343769.6	2763	4	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_2	14.1656862405839	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTTGCTGTTTGTA	-3	True	NA	NA	False	AATAAA	-20	NA	19900945	19935575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19933181
transcript_68225.known	chr19	+	1334	4	FSM	ENSG00000184635.16	ENST00000592160.5	1334	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	133.247472354596	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCCATTTTGGTTT	-8	True	NA	NA	False	NA	NA	NA	19900970	19932997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19932007
transcript_68226.known	chr19	+	590	4	FSM	ENSG00000184635.16	ENST00000591366.5	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	131.834070794398	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTACACTCCAGCTTG	-1	True	NA	NA	False	NA	NA	NA	19900927	19927313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19927110
transcript_68237.nic	chr19	-	878	5	NIC	ENSG00000197124.12	novel	581	5	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	34.1128641424317	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	-5	True	NA	-5	True	AATAAA	-21	NA	20039534	20004419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_20004748_20007140_20007276_20023003_20023100_20024249_20024377_20039342
transcript_6824.known	chr1	-	1933	13	FSM	ENSG00000117155.17	ENST00000605755.5	1933	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_12	60.8698520524643	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGTGTGTCATAAAG	14	True	NA	-40	True	NA	NA	NA	84690444	84647375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84690370
transcript_68243.known	chr19	-	609	4	FSM	ENSG00000197124.12	ENST00000601100.5	609	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	42.7629122799964	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTTTTCAAATGTATG	253	False	NA	NA	False	AGTAAA	-41	NA	20039276	20006993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039172
transcript_68244.known	chr19	-	3244	4	FSM	ENSG00000197124.12	ENST00000397165.7	3244	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	9.7410927974683	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCATTGAATTA	-3	True	NA	-3	True	AATAAA	-23	NA	20039505	20004417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039342
transcript_68246.nic	chr19	-	743	4	NIC	ENSG00000197124.12	novel	3244	4	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.8510515453766	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	-5	True	NA	-5	True	AATAAA	-21	NA	20039534	20004419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_20004748_20023003_20023100_20024249_20024377_20039342
transcript_68252.known	chr19	-	395	3	FSM	ENSG00000197124.12	ENST00000599240.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATGGAGTCAGTACAAA	79	False	NA	NA	False	AATAAA	-14	NA	20039450	20030716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20030883_20030992_20031114_20039342
transcript_68253.known	chr19	-	2161	6	FSM	ENSG00000197124.12	ENST00000358523.9	2161	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.4585199933601	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGTGTAATGATAGTGA	324	False	NA	-9	True	AATAAA	-14	NA	20039205	20005666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20030707_20030883_20030992_20031114_20039172
transcript_6828.known	chr1	-	2457	15	FSM	ENSG00000117155.17	ENST00000481102.5	2457	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	89.6831440490944	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGATGGTCTGAGTTGT	443	False	NA	-3	True	CATAAA	-19	NA	84690304	84647338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84647608_84649670_84649949_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690153
transcript_6831.known	chr1	-	3345	2	FSM	ENSG00000171517.6	ENST00000440886.1	3345	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTGTTGAGGTGCAT	NA	False	NA	-12	True	AATAAA	-17	NA	84866159	84811601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84814172_84865384
transcript_6832.known	chr1	-	3044	14	FSM	ENSG00000153898.13	ENST00000370608.8	3044	14	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	2.26629536348557	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATTCTTACTATTTT	-13	True	NA	-6	True	AATAAA	-19	NA	84997113	84925582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84926722_84929557_84929680_84931361_84931569_84937754_84937878_84937980_84938083_84939552_84939703_84940878_84940992_84947032_84947133_84952242_84952340_84952445_84952531_84956430_84956585_84958528_84958703_84965548_84965709_84996795
transcript_68331.nnic	chr19	-	1052	2	ISM	ENSG00000267383.8	ENST00000693630.1	520	3	-56	31962	-30	-322	5prime_fragment	FALSE	canonical	3	14	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGATTTTGACTGC	NA	False	NA	NA	False	NA	NA	NA	20238490	20216467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_20217317_20238287
transcript_68340.known	chr19	-	618	2	FSM	ENSG00000267383.8	ENST00000585816.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGCCACAAAGATACTC	13	True	NA	NA	False	AATACA	-2	NA	20238431	20228009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20228484_20238287
transcript_68341.known	chr19	-	883	2	FSM	ENSG00000267383.8	ENST00000585498.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGAGACCCTCTGCCTGG	-16	True	NA	NA	False	NA	NA	NA	20238460	20176099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20176810_20238287
transcript_68346.known	chr19	+	1724	4	FSM	ENSG00000213988.11	ENST00000474284.1	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	26.3986531642978	3689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTTGAAATTTCCT	1	True	NA	63	True	NA	NA	NA	20077993	20127076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20078136_20105220_20105317_20125005_20126167_20126751
transcript_68352.known	chr19	+	3744	4	FSM	ENSG00000213988.11	ENST00000418063.3	3744	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	55.4156014935225	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGATTGTGTGTGAAG	7	True	NA	5	True	AATAAA	-19	NA	20077999	20121165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20117780
transcript_68353.known	chr19	+	1918	6	FSM	ENSG00000213988.11	ENST00000469078.5	1918	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	108.884158627415	3649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	1	True	NA	5	True	TATAAA	-5	NA	20077993	20127018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20121221_20121347_20125005_20126167_20126751
transcript_6836.known	chr1	-	2810	13	FSM	ENSG00000055732.13	ENST00000370589.7	2810	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	4.74341649025257	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATGAAGTAATTATT	-22	True	NA	NA	False	ATTAAA	-17	NA	85048500	85018081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85048395
transcript_68362.known	chr19	+	734	4	FSM	ENSG00000256229.8	ENST00000597083.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	43.3666538560063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTCTCTCACCCTCGAC	13	False	NA	NA	False	ATTAAA	-17	NA	20167227	20188776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20188398
transcript_68363.known	chr19	+	3895	4	FSM	ENSG00000256229.8	ENST00000335117.9	3895	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	35.4055865020699	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATTATGTGTGAATTT	-1	True	NA	20	True	AATAAA	-21	NA	20167213	20200488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20196963
transcript_68364.nnic	chr19	+	730	3	NNC	ENSG00000269274.1	novel	1113	3	NA	NA	-17683	-8149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAATTTCTTCAACAT	1133	False	NA	NA	False	NA	NA	NA	20277405	20295645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_20277684_20295088_20295216_20295320
transcript_6837.known	chr1	-	3391	4	FSM	ENSG00000162642.14	ENST00000294661.8	3391	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	109.77552854196	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-13	True	NA	-10	True	ATTAAA	-16	NA	85259672	85249952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85252703_85258523_85258723_85258934_85259062_85259357
transcript_68380.known	chr19	-	1067	3	FSM	ENSG00000231205.12	ENST00000542380.6	1075	3	1	7	0	-7	multi-exon	FALSE	canonical	3	11	junction_2	1.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTCTCTTGATTG	-11	True	NA	-8	True	AATAAA	-11	NA	20424969	20340268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20341102_20375959_20376010_20424785
transcript_68392.known	chr19	-	3330	3	FSM	ENSG00000231205.12	ENST00000615684.4	3330	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	70	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCATTAGATTATGTG	2	True	NA	-10	True	AATAAA	-14	NA	20424956	20395954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20399039_20408949_20409025_20424785
transcript_68394.nic	chr19	-	1006	3	FSM	ENSG00000231205.12	ENST00000691522.1	938	3	-68	0	-55	0	multi-exon	FALSE	canonical	3	78	junction_2	176	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	7196	False	NA	-3	True	AATATA	-18	NA	20425033	20405449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20406133_20408949_20409025_20424785
transcript_68400.known	chr19	-	1004	3	FSM	ENSG00000231205.12	ENST00000541160.6	1120	3	10	106	-1	-4	multi-exon	FALSE	canonical	3	65	junction_1	216.5	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTTTCAGTCTTTTTTT	-1	True	NA	-5	True	ATTAAA	-17	NA	20424959	20340367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20341102_20408949_20409046_20424785
transcript_68401.known	chr19	-	1446	3	FSM	ENSG00000231205.12	ENST00000597334.2	1464	3	9	9	0	-4	multi-exon	FALSE	canonical	3	430	junction_1	34	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATATGTTGAAGAAT	-11	True	NA	-14	True	AATAAA	-17	NA	20424969	20404966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20406133_20408949_20409046_20424785
transcript_68402.known	chr19	-	737	4	FSM	ENSG00000231205.12	ENST00000600513.5	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	207.398703521074	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGGCAAAGACTTTAA	9	True	NA	NA	False	AAGAAA	-34	NA	20424921	20398657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20399039_20406008_20406133_20408949_20409046_20424785
transcript_68413.nnic	chr19	-	1051	5	NNC	ENSG00000237440.9	novel	544	5	NA	NA	-19	3593	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5978514723404	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACATCTGTAAT	NA	False	NA	53	True	AATAAA	-14	NA	20565828	20541716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_20542313_20545935_20545977_20552474_20552571_20553708_20553836_20565637
transcript_68415.nnic	chr19	-	993	5	NNC	ENSG00000237440.9	novel	544	5	NA	NA	-19	3535	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25.5978514723404	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATTTCTATGATCATA	NA	False	NA	-5	True	ATTAAA	-16	NA	20565828	20541774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_20542313_20545935_20545977_20552474_20552571_20553708_20553836_20565637
transcript_68420.known	chr19	-	8352	4	FSM	ENSG00000237440.9	ENST00000427401.9	8352	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	5.71547606649408	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCCTCAGAAAAGCTTT	-1	True	NA	0	True	AATAAA	-16	NA	20565781	20537991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20545977_20552474_20552571_20553708_20553836_20565637
transcript_68423.nnic	chr19	-	975	4	NNC	ENSG00000269110.1	novel	522	5	NA	NA	95755	6214	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	27.6204433144888	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCAGTTTTCAACTTCAT	NA	False	NA	-18	True	AATAAA	-19	NA	20565828	20547577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_20548139_20552474_20552571_20553708_20553836_20565637
transcript_68424.known	chr19	-	4404	5	NNC	ENSG00000188171.17	novel	6063	4	NA	NA	30	-1428	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	58.9719212846249	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGATCATGAGGTCAGGA	74	False	NA	NA	False	NA	NA	NA	20661507	20621366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_20624365_20624531_20625651_20645683_20645780_20646278_20646406_20661443
transcript_68428.known	chr19	-	6063	4	FSM	ENSG00000188171.17	ENST00000601440.6	6063	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	43.3666538560063	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGATGACATTTTTGT	10	True	NA	NA	False	AATAAA	-19	NA	20661571	20619938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20625651_20645683_20645780_20646278_20646406_20661443
transcript_6843.known	chr1	-	3254	3	FSM	ENSG00000162642.14	ENST00000471115.6	3254	3	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	116	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-3	True	NA	-10	True	ATTAAA	-16	NA	85259662	85249952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85252703_85258523_85258723_85259357
transcript_68434.known	chr19	-	1123	4	FSM	ENSG00000188171.17	ENST00000291750.6	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	27.4752413799932	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAATGGATTTATTT	-15	True	NA	-7	True	AATATA	-16	NA	20661596	20644701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20645449_20645683_20645780_20646278_20646406_20661443
transcript_68443.known	chr19	-	501	2	FSM	ENSG00000188171.17	ENST00000595405.1	501	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTGTAGCCTTACTAG	44	False	NA	NA	False	NA	NA	NA	20661537	20625243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20625651_20661443
transcript_68444.known	chr19	+	757	4	FSM	ENSG00000160229.13	ENST00000594534.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.79271573232759	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAATATTTATAACATT	8	True	NA	NA	False	TATAAA	-1	NA	20776309	20799393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20799000
transcript_68448.known	chr19	+	4539	4	FSM	ENSG00000160229.13	ENST00000344519.10	4539	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	12.1928941054479	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATGGAAAACAAACAAAA	2	True	NA	NA	False	AATAAA	-24	NA	20776303	20809995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20805826
transcript_68451.nnic	chr19	+	516	4	NNC	ENSG00000160229.13	novel	4539	4	NA	NA	-9	9863	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.522013940528	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCCTCAGAAAAGCTTT	-7	True	NA	NA	False	AATAAA	-16	NA	20776294	20819858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_20776451_20792511_20792639_20793782_20793879_20819721
transcript_68456.nnic	chr19	+	636	3	NNC	ENSG00000160229.13	novel	4539	4	NA	NA	-9	-1512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAATTTCTTCA	-7	True	NA	NA	False	AAGAAA	-10	NA	20776294	20793085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_20776451_20792511_20792639_20792732
transcript_68459.nic	chr19	+	1098	3	ISM	ENSG00000160229.13	ENST00000594534.5	757	4	-15	4796	-9	0	5prime_fragment	FALSE	canonical	3	28	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATCTTCTAATTTTTT	-7	True	NA	NA	False	CATAAA	-16	NA	20776294	20794597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_20776451_20792511_20792639_20793782
transcript_68461.nnic	chr19	+	660	3	NNC	ENSG00000160229.13	novel	1120	3	NA	NA	-2	-1512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAATTTCTTCA	0	True	NA	NA	False	AAGAAA	-10	NA	20776301	20793085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_20776482_20792511_20792639_20792732
transcript_68464.nic	chr19	+	728	2	ISM	ENSG00000160229.13	ENST00000594534.5	757	4	-15	6310	-9	-1514	5prime_fragment	FALSE	canonical	3	33	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGAAAAAAATTTCTT	-7	True	NA	NA	False	AAGAAA	-8	NA	20776294	20793083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_20776451_20792511
transcript_68467.known	chr19	+	549	3	FSM	ENSG00000105750.15	ENST00000599885.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	26	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCATACTAGAGTAAA	11	True	NA	NA	False	NA	NA	NA	20923303	20949093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20923404_20934948_20935048_20948743
transcript_6847.nic	chr1	+	754	2	ISM	ENSG00000223653.6	ENST00000654182.1	2673	3	-89	69836	-89	-69836	5prime_fragment	FALSE	canonical	2	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACACACACAAAAAAAC	-2	True	NA	NA	False	AAGAAA	-20	NA	85276298	85277895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_85276798_85277640
transcript_68470.nnic	chr19	+	2119	2	NIC	ENSG00000105750.15	novel	2333	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAGCATTCAG	NA	False	NA	14	True	AATAAA	-17	NA	20923238	20950697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_20923404_20948743
transcript_68471.known	chr19	+	2333	4	FSM	ENSG00000105750.15	ENST00000328178.13	2333	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	16.3095064303001	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAGCATTCAG	-4	True	NA	14	True	AATAAA	-17	NA	20923250	20950697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20948743
transcript_68472.known	chr19	+	1259	4	FSM	ENSG00000105750.15	ENST00000596476.1	1259	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	33.0689515339624	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCACTTTTGTCAATA	17	False	NA	NA	False	ATTAAA	-45	NA	20923309	20943726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20923417_20934023_20934151_20934948_20935048_20942800
transcript_68473.known	chr19	+	483	5	FSM	ENSG00000105750.15	ENST00000601284.5	483	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	40.7768316572046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTCTTTCCAAAAAGTG	-8	True	NA	NA	False	AATATA	-2	NA	20923284	20948791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20946299_20946390_20948743
transcript_6848.nic	chr1	+	1052	2	ISM	ENSG00000223653.6	ENST00000654182.1	2673	3	-89	69538	-89	-69538	5prime_fragment	FALSE	canonical	2	7	junction_1	0	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTCTAGTTTATTTG	-2	True	NA	NA	False	AATAAA	-20	NA	85276298	85278193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_85276798_85277640
transcript_68481.known	chr19	+	3886	5	FSM	ENSG00000118620.13	ENST00000261560.10	3886	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	7.66077672302228	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGTTATGTGTGGTTA	-1	True	NA	8	True	AATAAA	-20	NA	21020656	21060050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085_21034185_21056630
transcript_68483.nnic	chr19	+	595	5	Fusion	ENSG00000160352.16_ENSG00000118620.13	novel	595	5	NA	NA	-26	-12	multi-exon	FALSE	canonical	0	0	junction_4	20.0312256240101	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGAAAATTCATAC	NA	False	NA	NA	False	NA	NA	NA	21020607	21118465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085_21034185_21118385
transcript_68485.nic	chr19	+	2342	5	NIC	ENSG00000118620.13	novel	3886	5	NA	NA	-26	14	intron_retention	FALSE	canonical	3	18	junction_3	16.3248277173145	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAATTCATACTGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	21020607	21058460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088_21034185_21056630
transcript_68486.nnic	chr19	+	592	5	Fusion	ENSG00000160352.16_ENSG00000118620.13	novel	595	5	NA	NA	-26	-12	multi-exon	FALSE	canonical	0	0	junction_4	20.3024013358026	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAGAAAATTCATAC	NA	False	NA	NA	False	NA	NA	NA	21020607	21118465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088_21034185_21118385
transcript_68487.nic	chr19	+	573	4	ISM	ENSG00000118620.13	ENST00000594110.5	536	5	-42	15325	-26	525	5prime_fragment	FALSE	canonical	3	43	junction_3	2.44948974278318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCTTAAAATGTTATTT	NA	False	NA	NA	False	AAAAAG	-9	NA	21020607	21034242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085
transcript_6849.known	chr1	-	776	3	FSM	ENSG00000142867.14	ENST00000620248.2	776	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	68	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTTTTAATTTTT	-8	True	NA	NA	False	NA	NA	NA	85276456	85267623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85267950_85270617_85270907_85276295
transcript_68493.nic	chr19	+	518	2	ISM	ENSG00000118620.13	ENST00000595833.1	502	3	-49	10607	-26	-10607	5prime_fragment	FALSE	canonical	3	46	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAACACTGACC	NA	False	NA	NA	False	AAAAAG	-45	NA	21020607	21023110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21020804_21022788
transcript_68494.known	chr19	+	3021	4	FSM	ENSG00000118620.13	ENST00000595401.1	3021	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	13.9602610609146	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	30	False	NA	NA	False	NA	NA	NA	21020716	21036802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088
transcript_6850.known	chr1	-	2833	3	FSM	ENSG00000142867.14	ENST00000648566.1	2833	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	19	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGGTTTGTGGGTTTTTG	-78	True	NA	NA	False	AATAAA	-18	NA	85276632	85265775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85267983_85270617_85270907_85276295
transcript_68519.known	chr19	+	647	4	FSM	ENSG00000160352.16	ENST00000618008.4	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.0765799460496	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAAACCTTTCAAATG	0	True	NA	NA	False	CATAAA	-37	NA	21082202	21117084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21098184_21098312_21098814_21098911_21116806
transcript_68541.nic	chr19	+	996	2	ISM	ENSG00000160352.16	ENST00000618008.4	647	4	-60	18110	-16	7216	intron_retention	FALSE	canonical	3	22	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	-2	True	NA	NA	False	NA	NA	NA	21082142	21098974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21082349_21098184
transcript_68542.known	chr19	+	2671	6	FSM	ENSG00000160352.16	ENST00000610902.4	2671	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	17.2904597972408	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	6	True	NA	NA	False	NA	NA	NA	21082208	21125094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806_21118886_21124960
transcript_68543.known	chr19	+	800	5	FSM	ENSG00000160352.16	ENST00000596053.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	34.5036229981722	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAATAATATTCTG	29	False	NA	NA	False	NA	NA	NA	21082173	21125270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21124960
transcript_68544.known	chr19	+	8752	5	FSM	ENSG00000160352.16	ENST00000456283.7	8752	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	17.3637553541853	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	0	True	NA	NA	False	NA	NA	NA	21082202	21125094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806
transcript_68545.known	chr19	+	2066	5	FSM	ENSG00000160352.16	ENST00000620627.1	2066	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	21.9815263346293	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTGGAACGAAACC	15	False	NA	NA	False	AAAAAG	-9	NA	21082249	21118477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116828
transcript_68546.known	chr19	+	2696	7	FSM	ENSG00000160352.16	ENST00000613286.4	2696	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	37.9297596441985	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	0	True	NA	NA	False	NA	NA	NA	21082202	21125094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21109622_21109645_21116806_21118886_21124960
transcript_68547.known	chr19	+	898	2	FSM	ENSG00000160352.16	ENST00000600535.1	898	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGTGTTTTGCTGAGTT	1757	False	NA	14	True	AATAAA	-14	NA	21084019	21091758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21084070_21090910
transcript_6856.known	chr1	-	2745	3	FSM	ENSG00000282057.1	ENST00000467530.5	2745	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGGTGATTTTATTAA	1	True	NA	NA	False	ATTAAA	-13	NA	85578150	85493416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85495879_85496165_85496282_85577983
transcript_68564.known	chr19	+	1082	6	FSM	ENSG00000196705.8	ENST00000598331.1	1082	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.1834391678616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCATATAGATGTGAAGA	11	False	NA	NA	False	NA	NA	NA	21142076	21183158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21142187_21143550_21143644_21151078_21151199_21166334_21166462_21167570_21167667_21182622
transcript_68567.known	chr19	+	1971	6	FSM	ENSG00000196705.8	ENST00000600692.5	1971	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	13.905394636615	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCCCAGCATTTTGGG	NA	False	NA	NA	False	ATTAAA	-30	NA	21142023	21184092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21175452_21175475_21182622
transcript_68569.nnic	chr19	+	1015	6	NNC	ENSG00000196705.8	novel	1082	6	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	29.7281011838967	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCTTTATTTACT	NA	False	NA	17	True	AATAAA	-24	NA	21142000	21190231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21182622_21182769_21189864
transcript_6857.known	chr1	+	2278	5	FSM	ENSG00000142871.18	ENST00000451137.7	2278	5	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_3	43.3495963072322	4636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGATTTAAGAAAACAG	0	True	NA	5	True	AATAAA	-16	NA	85580760	85583950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_85581048_85581364_85581579_85581927_85582285_85582415_85582625_85582739
transcript_68579.known	chr19	+	13894	5	FSM	ENSG00000196705.8	ENST00000311048.11	13894	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	24.1764348074732	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGGTGTGTGTGTGTG	0	True	NA	NA	False	TATAAA	-16	NA	21142039	21196053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21182622
transcript_68582.nnic	chr19	+	869	5	NIC	ENSG00000196705.8	novel	13894	5	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	30.5971812427223	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCTTTATTTACT	NA	False	NA	17	True	AATAAA	-24	NA	21142000	21190231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21189864
transcript_68585.nic	chr19	+	565	4	ISM	ENSG00000196705.8	ENST00000599296.5	586	6	-34	14931	-23	-14931	5prime_fragment	FALSE	canonical	3	48	junction_3	15.3260852434302	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGTCCTTACAATGT	NA	False	NA	NA	False	AAAACA	-41	NA	21142000	21167729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570
transcript_68589.known	chr19	+	610	3	FSM	ENSG00000196705.8	ENST00000594425.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	39	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCTTTATTTACT	-3	True	NA	17	True	AATAAA	-24	NA	21142036	21190231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21142187_21143550_21143644_21189864
transcript_6859.known	chr1	-	6203	10	FSM	ENSG00000117174.11	ENST00000370574.4	6203	10	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_2	9.82187028027092	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTAACCCCTGACTT	-17	True	NA	NA	False	AATAAA	-20	NA	85708433	85649416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
transcript_68594.nic	chr19	+	524	2	ISM	ENSG00000196705.8	ENST00000599296.5	586	6	-34	38772	-23	-38772	5prime_fragment	FALSE	canonical	3	80	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAACAAAAAAACCTGAC	NA	False	NA	NA	False	GATAAA	-34	NA	21142000	21143888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21142187_21143550
transcript_68595.nnic	chr19	+	450	2	NNC	ENSG00000196705.8	novel	610	3	NA	NA	-2	-38772	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAACAAAAAAACCTGAC	NA	False	NA	NA	False	GATAAA	-34	NA	21142021	21143888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_21142134_21143550
transcript_68599.known	chr19	-	4004	4	FSM	ENSG00000182141.10	ENST00000356929.3	4004	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.48331477354788	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGTGTGAACTTGTTT	1	True	NA	-1	True	AATAAA	-25	NA	21329410	21291159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21294740_21309245_21309342_21310500_21310628_21329209
transcript_68600.known	chr19	-	2630	4	FSM	ENSG00000182141.10	ENST00000598046.5	2630	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	12.2565175405668	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATCACAGATCTTATT	9	False	NA	NA	False	AATAAA	-21	NA	21329425	21292603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21294740_21309245_21309342_21327959_21328142_21329209
transcript_68602.known	chr19	-	567	3	FSM	ENSG00000182141.10	ENST00000601295.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGAGAAAAACCCTACAA	98	False	NA	NA	False	NA	NA	NA	21329336	21294395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21294740_21309245_21309342_21329209
transcript_68605.nic	chr19	-	1263	2	ISM	ENSG00000182141.10	ENST00000602023.1	590	4	-29	13738	-1	-13738	5prime_fragment	FALSE	canonical	3	21	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTATTATAGTTTCATGT	0	True	NA	NA	False	NA	NA	NA	21329411	21308280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_21309342_21329209
transcript_68610.known	chr19	+	1021	5	FSM	ENSG00000172687.14	ENST00000597492.1	1021	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	209.619297775753	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCTTTTTTTATTAGTA	24	False	NA	NA	False	NA	NA	NA	21359020	21376424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21360474_21360597_21361765_21361859_21375237_21375365_21375868
transcript_68614.known	chr19	+	1142	5	FSM	ENSG00000172687.14	ENST00000380870.8	1142	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	88.4911718760691	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	-5	True	NA	8	True	ATTAAA	-12	NA	21358991	21379302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378628
transcript_68615.known	chr19	+	2442	5	FSM	ENSG00000172687.14	ENST00000311015.7	2442	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	129.44014060561	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTGTC	NA	False	NA	6	True	ATTAAA	-10	NA	21358929	21379300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21377388
transcript_68616.known	chr19	+	6177	5	FSM	ENSG00000172687.14	ENST00000683779.1	6177	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	162.699685002768	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGTGAAGTTAATG	3	True	NA	15	True	AATAAA	-25	NA	21358999	21388582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21382865
transcript_68617.known	chr19	+	1086	3	FSM	ENSG00000172687.14	ENST00000594245.1	1086	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	200.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTTTTTAAATGCA	33	False	NA	NA	False	AATAAA	-22	NA	21359029	21372842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21371963
transcript_68620.known	chr19	+	546	5	FSM	ENSG00000196268.12	ENST00000596302.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	9.97496867163	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGAATGAGTGTAATGT	-8	True	NA	NA	False	AAGAAA	-11	NA	21397118	21423040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397268_21405128_21405256_21405757_21405857_21413465_21413509_21422912
transcript_68622.known	chr19	-	1916	5	FSM	ENSG00000268119.7	ENST00000597444.6	1916	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	74.4546842045549	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACTCCCACTCACAATT	7	True	NA	NA	False	NA	NA	NA	21463886	21448050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21449378_21453549_21453778_21454382_21454473_21456460_21456589_21463743
transcript_68632.known	chr19	-	967	5	FSM	ENSG00000268119.7	ENST00000600469.7	1443	5	31	445	11	-288	multi-exon	FALSE	canonical	3	11	junction_1	76.1950621759704	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGTTATTATGCCACAAAC	20	True	NA	NA	False	NA	NA	NA	21463873	21452888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21453280_21453549_21453778_21454382_21454473_21456460_21456589_21463743
transcript_68636.known	chr19	+	1665	4	FSM	ENSG00000196268.12	ENST00000339914.6	1665	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.8149218578274	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATATGTGTGTGTGTTT	29	False	NA	3	True	ATTAAA	-24	NA	21397155	21408799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397268_21405128_21405256_21405757_21405857_21407472
transcript_68637.nic	chr19	+	1588	4	ISM	ENSG00000196268.12	ENST00000596302.5	546	5	-35	8397	-35	0	5prime_fragment	FALSE	canonical	3	10	junction_3	8.28653526310404	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTGTGAAGAATCAGAA	NA	False	NA	52	True	AATAAA	-15	NA	21397083	21414643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21397268_21405128_21405256_21405757_21405857_21413465
transcript_68639.known	chr19	+	1536	4	FSM	ENSG00000196268.12	ENST00000594390.5	1536	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.42809041582063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTGTGAAGAATCAGAA	6	True	NA	52	True	AATAAA	-15	NA	21397132	21414643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21413465
transcript_68642.known	chr19	+	4785	4	FSM	ENSG00000197013.11	ENST00000358491.9	4785	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	32.2937902527543	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATTTTCAATTATTTG	-6	True	NA	13	True	AATAAA	-20	NA	21505601	21540668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21505775_21529657_21529785_21530588_21530685_21536279
transcript_68648.nnic	chr19	-	3320	4	NNC	ENSG00000268119.7	novel	1916	5	NA	NA	-48	-1897	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	79.3403358254103	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTTTTATATATTTAA	NA	False	NA	-25	True	AATAAA	-13	NA	21463956	21446137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_21449027_21454382_21454473_21456460_21456589_21463743
transcript_68650.nnic	chr19	-	1459	4	NIC	ENSG00000268119.7	novel	1916	5	NA	NA	-48	-299	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	80.2786812713479	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCACAAGGCAAGGATGC	NA	False	NA	NA	False	AATAAA	-15	NA	21463956	21448349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_21449378_21454382_21454473_21456460_21456589_21463743
transcript_68655.nnic	chr19	-	1267	4	NIC	ENSG00000268119.7	novel	1443	5	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	85.4413379004696	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTAAATTCTTAAT	NA	False	NA	-17	True	AATAAA	-25	NA	21463956	21452443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_21453280_21454382_21454473_21456460_21456589_21463743
transcript_68656.known	chr19	-	1581	4	FSM	ENSG00000268119.7	ENST00000599993.7	1736	4	12	143	1	33	multi-exon	FALSE	canonical	3	81	junction_1	51.7322164827897	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCTATGTTTTATAATCC	-3	True	NA	NA	False	NA	NA	NA	21463896	21452567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21453778_21454382_21454473_21456460_21456589_21463743
transcript_68659.nic	chr19	+	474	3	ISM	ENSG00000196268.12	ENST00000339914.6	1665	4	-72	2879	-35	84	5prime_fragment	FALSE	canonical	3	23	junction_2	3.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGCCAGTCCTGG	NA	False	NA	NA	False	TTTAAA	-11	NA	21397083	21405920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21397268_21405128_21405256_21405757
transcript_68660.nic	chr19	+	474	3	ISM	ENSG00000196268.12	ENST00000594390.5	1536	4	-49	8720	-35	87	5prime_fragment	FALSE	canonical	3	10	junction_2	10	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCAGTCCTGGCCG	NA	False	NA	NA	False	TTTAAA	-14	NA	21397083	21405923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21397268_21405128_21405256_21405760
transcript_68664.known	chr19	+	375	3	FSM	ENSG00000197013.11	ENST00000598747.1	375	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTGCAAGACTGTCTA	33	False	NA	6	True	AATAAA	-20	NA	21505640	21507664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21505775_21505984_21506081_21507519
transcript_68665.known	chr19	+	681	3	FSM	ENSG00000197013.11	ENST00000596237.5	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGAGAAAGATATATATA	-4	True	NA	NA	False	NA	NA	NA	21505603	21518988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21505775_21505984_21506081_21518574
transcript_68669.nic	chr19	+	977	2	ISM	ENSG00000196268.12	ENST00000339914.6	1665	4	-72	2878	-35	85	intron_retention	FALSE	canonical	3	30	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCCAGTCCTGGC	NA	False	NA	NA	False	TTTAAA	-12	NA	21397083	21405921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21397268_21405128
transcript_68671.known	chr19	+	4386	2	FSM	ENSG00000196268.12	ENST00000355504.4	4386	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTAAGTGGAGAGGTT	6	True	NA	2	True	ATTAAA	-18	NA	21397132	21427163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397268_21422912
transcript_68675.known	chr19	+	538	2	FSM	ENSG00000197013.11	ENST00000597556.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTGTCTAATGAATATTAA	38	False	NA	17	True	AATAAA	-31	NA	21505698	21507675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21506081_21507519
transcript_68677.known	chr19	-	4690	2	FSM	ENSG00000268119.7	ENST00000594557.1	4690	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTACAAAACATTACTGA	9	True	NA	NA	False	NA	NA	NA	21463884	21452039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21456589_21463743
transcript_68681.known	chr19	+	1769	1	FSM	ENSG00000196268.12	ENST00000599461.1	1769	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAACAACAAGAACAAAA	-2	True	NA	NA	False	AAAAAG	-37	NA	21397165	21398934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397200_21398900
transcript_68682.known	chr19	-	803	3	FSM	ENSG00000268119.7	ENST00000663704.1	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCATTCAACTCTGAA	5	True	NA	NA	False	AATACA	-22	NA	21463888	21453942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21454473_21456460_21456589_21463743
transcript_68683.known	chr19	-	5691	5	FSM	ENSG00000197020.12	ENST00000358296.11	5691	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	20.0296654989543	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAATTTTTTTTTTTC	-6	True	NA	NA	False	AATAAA	-5	NA	21767579	21722770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21727990_21744016_21744116_21744940_21745068_21765693_21765787_21767426
transcript_6869.nic	chr1	-	2329	17	NIC	ENSG00000122417.15	novel	7560	18	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_11	16.3396565141376	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	NA	False	NA	-10	True	AATAAA	-13	NA	86396354	86348736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_68692.known	chr19	-	5235	4	FSM	ENSG00000198521.12	ENST00000354959.9	5235	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	54.3507129668048	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTATATATTTTTCTT	-1	True	NA	-22	True	AATAAA	-29	NA	21836182	21804945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21836035
transcript_68693.known	chr19	-	5249	4	FSM	ENSG00000198521.12	ENST00000357491.10	5249	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	63.4787803565535	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGGTATATATTTTT	-27	True	NA	-25	True	AATAAA	-26	NA	21852068	21804948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21851904
transcript_68704.known	chr19	-	447	3	FSM	ENSG00000198521.12	ENST00000596899.1	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	79.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTGGATGAGTGTAAGG	NA	False	NA	NA	False	TATAAA	-42	NA	21852125	21809680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21809808_21817887_21817987_21851904
transcript_68705.known	chr19	-	580	3	FSM	ENSG00000198521.12	ENST00000599906.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	81.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACATCTAGCTCAACATAA	-6	True	NA	NA	False	NA	NA	NA	21836187	21809478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21809808_21817887_21817987_21836035
transcript_68708.nnic	chr19	+	1244	4	NNC	ENSG00000269138.1	novel	2304	3	NA	NA	-95351	101948	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	4894	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	22368570	22574984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_22369006_22464546_22464643_22568643_22568900_22574527
transcript_68716.known	chr19	-	354	1	FSM	ENSG00000236312.3	ENST00000465389.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAACTTTTTTGAGAA	32	False	NA	NA	False	NA	NA	NA	22368952	22368598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_22368600_22369000
transcript_68759.known	chr19	+	581	4	FSM	ENSG00000267886.1	ENST00000594318.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	3.68178700572909	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTCAGAAGCCGTGG	-22	True	NA	NA	False	NA	NA	NA	23075200	23095616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23075388_23095011_23095155_23095262_23095441_23095543
transcript_68768.nnic	chr19	+	568	4	NIC	ENSG00000183850.14	novel	464	3	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	31.8573208052543	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	NA	False	NA	NA	False	AATACA	-45	NA	23075179	23136106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_23075388_23098339_23098414_23134079_23134207_23135947
transcript_6877.known	chr1	-	2155	16	FSM	ENSG00000122417.15	ENST00000370566.7	2155	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	24.406738595906	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTCTAAGTAGTAGAT	NA	False	NA	-11	True	AATAAA	-12	NA	86396340	86348737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_68770.known	chr19	+	464	3	FSM	ENSG00000183850.14	ENST00000593635.1	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	44	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	-13	True	NA	NA	False	AATACA	-45	NA	23075209	23136106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23075388_23134079_23134207_23135947
transcript_68773.known	chr19	+	2326	4	FSM	ENSG00000183850.14	ENST00000597761.7	2326	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	28.3117564901148	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTCCAAAGATTTTTT	-3	True	NA	5	True	AATAAA	-17	NA	23117024	23147221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23117177_23134079_23134207_23135947_23136044_23145270
transcript_68783.nnic	chr19	-	1278	5	NNC	ENSG00000196081.10	novel	583	5	NA	NA	-20	2340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.1009478460092	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCCTCTCTGCCTGC	NA	False	NA	-7	True	AATAAA	-24	NA	23250414	23219258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23219422_23223301_23224019_23231265_23231362_23232166_23232294_23250239
transcript_68788.known	chr19	-	583	5	FSM	ENSG00000196081.10	ENST00000597537.1	583	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	22.59424705539	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGACATCACAATTTACA	-16	True	NA	NA	False	CATAAA	-41	NA	23250388	23223929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23242588_23242711_23250239
transcript_68792.known	chr19	-	549	5	FSM	ENSG00000284428.1	ENST00000639327.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	32.7719392163479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGGAAAATGAGGAAGTC	-4	True	NA	-66	True	NA	NA	NA	23274228	23260021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23272618_23272724_23274075
transcript_68799.known	chr19	-	2798	4	FSM	ENSG00000196081.10	ENST00000418100.6	2798	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	8.04155872120988	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAACTAAT	-22	True	NA	NA	False	NA	NA	NA	23250394	23221598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23250239
transcript_68808.known	chr19	-	583	4	FSM	ENSG00000284428.1	ENST00000640838.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	18.4089350286454	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTTTGTCCTATG	-27	True	NA	50	True	NA	NA	NA	23274251	23259905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23274075
transcript_68816.known	chr19	-	574	3	FSM	ENSG00000284428.1	ENST00000638822.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	22.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCGCAACCTCCGCCT	-24	True	NA	NA	False	NA	NA	NA	23274248	23260658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260935_23261619_23261745_23274075
transcript_68820.known	chr19	-	752	3	FSM	ENSG00000284428.1	ENST00000639997.1	752	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAATGTTTTGAGTGAT	28	True	NA	NA	False	NA	NA	NA	23274196	23269762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23270293_23272618_23272720_23274075
transcript_68822.known	chr19	-	556	5	FSM	ENSG00000284428.1	ENST00000639752.1	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	18.6731759484026	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTACAAAAGTCATAAA	-20	True	NA	-45	True	NA	NA	NA	23274244	23260000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
transcript_68823.known	chr19	-	579	2	FSM	ENSG00000284428.1	ENST00000638919.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCCCATCCCAGTAAG	-23	True	NA	-1	True	AATAAA	-19	NA	23274247	23269885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23270293_23274075
transcript_68824.known	chr19	-	561	4	FSM	ENSG00000284428.1	ENST00000640517.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	21.2759645296439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTTTTCTTTG	-8	True	NA	NA	False	NA	NA	NA	23274232	23260730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260935_23261619_23261745_23270217_23270293_23274075
transcript_68825.known	chr19	-	695	2	FSM	ENSG00000167232.14	ENST00000595533.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATACACACTGGAGAGA	35	False	NA	NA	False	NA	NA	NA	23395418	23362124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23362726_23395324
transcript_68826.known	chr19	-	5400	4	FSM	ENSG00000167232.14	ENST00000300619.12	5400	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	2.94392028877595	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGAGTCCCGAATAA	-18	True	NA	-8	True	AATAAA	-31	NA	23395471	23357695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23362726_23373741_23373838_23374637_23374765_23395324
transcript_68827.known	chr19	-	565	4	FSM	ENSG00000167232.14	ENST00000596989.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.2559881290128	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGCACTTCTTGGGCAA	-18	True	NA	NA	False	AATACA	-2	NA	23395471	23308902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23309098_23373741_23373838_23374637_23374765_23395324
transcript_68847.nnic	chr19	-	702	6	NIC	ENSG00000269416.7	novel	798	6	NA	NA	-7	-87	combination_of_known_splicesites	FALSE	canonical	3	25	junction_5	24.0865107477194	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	NA	False	NA	NA	False	NA	NA	NA	23416082	23403366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23403510_23403719_23403748_23404950_23405109_23405257_23405336_23405999_23406106_23415893
transcript_68868.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601293.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	63.8957484240279	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCACAAATAGGATTGT	-22	True	NA	NA	False	NA	NA	NA	23416075	23400986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23415893
transcript_6889.nic	chr1	-	1653	12	ISM	ENSG00000122417.15	ENST00000294678.6	4267	18	-74	8693	-12	0	5prime_fragment	FALSE	canonical	3	63	junction_6	10.7910278005265	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGGAATTTCAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	86396354	86358786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_68895.nnic	chr19	-	348	3	NIC	ENSG00000269416.7	novel	559	4	NA	NA	-21	-87	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	70.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	NA	False	NA	NA	False	NA	NA	NA	23416096	23403366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23403494_23403719_23403748_23415903
transcript_68897.nnic	chr19	-	364	3	NIC	ENSG00000269416.7	novel	559	4	NA	NA	-21	-87	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	28	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	NA	False	NA	NA	False	NA	NA	NA	23416096	23403366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23403510_23403719_23403748_23415903
transcript_68902.nic	chr19	-	321	2	ISM	ENSG00000269416.7	ENST00000598922.1	572	3	-6	950	0	-87	5prime_fragment	FALSE	canonical	3	10	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-18	True	NA	NA	False	NA	NA	NA	23416071	23403366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_23403510_23415893
transcript_68903.nnic	chr19	-	322	2	NIC	ENSG00000269416.7	novel	470	3	NA	NA	-7	-87	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	NA	False	NA	NA	False	NA	NA	NA	23416082	23403366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23403510_23415903
transcript_68904.known	chr19	-	2387	5	FSM	ENSG00000269416.7	ENST00000600643.5	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	49.0681923449397	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACATGTTGGCGTGGCT	-18	True	NA	NA	False	ATTAAA	-12	NA	23416071	23399232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23405257_23405336_23415893
transcript_68905.known	chr19	-	798	6	FSM	ENSG00000269416.7	ENST00000593573.5	798	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	42.7523098791165	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAAATAGGATTGTGCC	-6	True	NA	NA	False	NA	NA	NA	23416059	23400983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23401048_23403205_23403510_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_68906.known	chr19	-	485	4	FSM	ENSG00000269416.7	ENST00000596763.1	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	22.553639765383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCCCAGGTGATGTGA	6	True	NA	NA	False	NA	NA	NA	23416047	23404751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23404847_23404950_23405109_23405257_23405336_23415893
transcript_68907.known	chr19	-	595	5	FSM	ENSG00000197372.10	ENST00000597074.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	75.7805219037188	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGACTTAACCAATGTTT	-1	True	NA	NA	False	NA	NA	NA	23687140	23654545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23654707_23656721_23656823_23662113_23662210_23663031_23663159_23687030
transcript_68908.known	chr19	-	669	4	FSM	ENSG00000197372.10	ENST00000601010.5	669	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	72.1664742106749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTTTTTTTTAAT	-10	True	NA	NA	False	NA	NA	NA	23687188	23658384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23658673_23662113_23662210_23663031_23663159_23687030
transcript_6891.known	chr1	-	1422	11	FSM	ENSG00000122417.15	ENST00000488879.6	1422	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	24.9567626105631	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACCAAAAATAAAAA	15	True	NA	NA	False	AGTAAA	-41	NA	86396286	86358816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86386914_86387087_86396032
transcript_68910.known	chr19	-	2311	4	FSM	ENSG00000197372.10	ENST00000359788.9	2311	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	3.39934634239519	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	0	True	NA	96	True	CATAAA	-22	NA	23687212	23652800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23654707_23662113_23662210_23663031_23663159_23687030
transcript_68912.nnic	chr19	-	2079	3	NIC	ENSG00000197372.10	novel	2311	4	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	73.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCTAAAGACTTTAA	0	True	NA	-9	True	AATAAA	-17	NA	23687212	23652905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23654707_23662113_23662210_23687030
transcript_68914.known	chr19	-	6497	4	FSM	ENSG00000196172.9	ENST00000402377.3	6497	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.85861230093008	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTCCATTGTGTATAT	-1	True	NA	NA	False	AATAAA	-22	NA	23758891	23739194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23745324_23754822_23754919_23755424_23755552_23758746
transcript_68915.nnic	chr19	-	727	4	NNC	ENSG00000196172.9	novel	6497	4	NA	NA	-34	-1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.97614984548545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTGTTTTCTTGCTT	NA	False	NA	NA	False	AATACA	-18	NA	23758925	23746776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23747102_23754822_23754919_23755424_23755552_23758746
transcript_68917.nnic	chr19	-	2120	2	NIC	ENSG00000196172.9	novel	628	3	NA	NA	-7	1530	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAATCTTTCA	-8	True	NA	-15	True	AATAAA	-17	NA	23758898	23743355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23745324_23758746
transcript_6893.nic	chr1	-	1536	11	NIC	ENSG00000122417.15	novel	4376	18	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_5	20.9131537554717	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTTTGGAATTTCAAAT	NA	False	NA	NA	False	AATAAA	-13	NA	86396354	86358786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_68935.nnic	chr19	+	1451	4	FSM	ENSG00000288920.1	ENST00000484897.4	2140	4	-50	739	-2	-739	multi-exon	FALSE	canonical	3	24	junction_3	40.7948798530186	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATGCTGCAATAATTA	NA	False	NA	0	True	AATAAA	-26	NA	23762953	23828129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23827069
transcript_68936.known	chr19	+	1001	4	FSM	ENSG00000288920.1	ENST00000471224.5	1001	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	23.8374122383748	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCACAGAAGAAAGAAAC	NA	False	NA	NA	False	NA	NA	NA	23762943	23832196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23763135_23807825_23807940_23808718_23808815_23831596
transcript_68943.nic	chr19	+	1092	3	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	-50	19353	-2	0	5prime_fragment	FALSE	canonical	3	109	junction_2	1.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCCTCTAATTTTTT	NA	False	NA	9	True	AATAAA	-16	NA	23762953	23809515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_23763135_23807825_23807940_23808718
transcript_68948.known	chr19	+	723	2	ISM	ENSG00000288920.1	ENST00000687994.1	4132	4	8	38494	1	0	5prime_fragment	FALSE	canonical	1	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCACAGAAGAAAGAAAC	13	True	NA	NA	False	NA	NA	NA	23763011	23832196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_23763135_23831596
transcript_68952.known	chr19	+	888	1	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	64158	819	45081	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCTTGCATAGGCTCT	49	False	NA	-80	True	NA	NA	NA	23827161	23828049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_23827200_23828000
transcript_68970.known	chr19	+	1032	6	FSM	ENSG00000268362.6	ENST00000656993.1	1032	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	37.9156959582704	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGGTGTTATGACTCT	0	True	NA	4	True	AAAAAG	-29	NA	24033404	24056335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24047707_24047851_24048936_24049015_24049404_24049549_24055981
transcript_68972.known	chr19	+	1995	6	FSM	ENSG00000268362.6	ENST00000666101.1	1995	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	32.8475265431052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGCCAGGTGTGGTGATT	3	True	NA	NA	False	AATAAA	-10	NA	24033407	24066749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24048936_24049015_24049404_24049549_24057930_24058107_24065462
transcript_68975.known	chr19	+	1371	6	FSM	ENSG00000268362.6	ENST00000660137.1	1371	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	32.8475265431052	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAATAAAACCACAA	-16	True	NA	NA	False	ACTAAA	-42	NA	24033445	24066727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24048936_24049015_24049404_24049549_24057930_24058107_24066026
transcript_68976.known	chr19	+	1886	6	FSM	ENSG00000268362.6	ENST00000668060.1	1886	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	36.0022221536394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAACAAAT	-27	True	NA	NA	False	ACTAAA	-32	NA	24033434	24066717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24048936_24049015_24049404_24049549_24063815_24063942_24065462
transcript_68979.known	chr19	+	803	6	FSM	ENSG00000268362.6	ENST00000661650.1	803	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	37.8227444800083	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGGTGATTTGACTCTCC	23	False	NA	NA	False	NA	NA	NA	24033572	24065679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24049409_24049549_24057930_24058107_24063815_24063942_24065462
transcript_6898.known	chr1	-	1002	8	FSM	ENSG00000122417.15	ENST00000479890.5	1002	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	34.4442762046948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAACAAAAACCAAAAATAAA	18	True	NA	NA	False	AGTAAA	-39	NA	86396283	86358818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382930_86383003_86383133_86383197_86396032
transcript_68980.nnic	chr19	+	765	6	NIC	ENSG00000213096.11	novel	4244	5	NA	NA	49	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_5	39.3466644075454	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	-8	True	NA	12	True	AATAAA	-13	NA	24033453	24107349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_24033622_24046183_24046280_24049404_24049549_24105939_24106067_24106547_24106644_24107215
transcript_68985.nnic	chr19	+	750	6	NNC	ENSG00000213096.11	novel	4244	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	46.036507252397	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	NA	False	NA	12	True	AATAAA	-13	NA	24033396	24107349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_24033622_24046183_24046280_24049476_24049549_24105939_24106067_24106547_24106644_24107215
transcript_68991.nic	chr19	+	897	5	NIC	ENSG00000268362.6	novel	1032	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	35.1212186576719	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGGTGTTATGACTCT	NA	False	NA	4	True	AAAAAG	-29	NA	24033396	24056335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_24033622_24046183_24046280_24048936_24049015_24049404_24049549_24055981
transcript_68994.known	chr19	+	1635	5	FSM	ENSG00000268362.6	ENST00000664627.1	1635	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.6540280907071	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAACAAAT	5	False	NA	NA	False	ACTAAA	-32	NA	24033554	24066717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24048936_24049015_24049409_24049549_24065462
transcript_68999.known	chr19	+	1911	5	FSM	ENSG00000268362.6	ENST00000653003.1	1911	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	36.5675744341896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCAGGTGTGGTGATTG	-47	True	NA	NA	False	AATAAA	-11	NA	24033414	24066750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24049404_24049549_24057930_24058107_24065462
transcript_69.known	ERCC-00162	+	507	1	FSM	ERCC-00162A	DQ516750	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00162_+_0_500
transcript_69000.known	chr19	+	1709	5	FSM	ENSG00000268362.6	ENST00000666861.1	1709	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	41.889736213063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAACAAAACAAAT	-6	True	NA	NA	False	ACTAAA	-32	NA	24033528	24066717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24049409_24049549_24063815_24063942_24065462
transcript_69006.known	chr19	+	2183	5	FSM	ENSG00000268362.6	ENST00000654594.1	2183	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	17.3853386507137	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGATGTGACTCTCT	-13	True	NA	23	True	AATAAA	-41	NA	24033448	24066952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24042442_24042723_24046183_24046280_24049404_24049549_24065462
transcript_69008.known	chr19	+	3625	4	FSM	ENSG00000268362.6	ENST00000670058.1	3625	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	32.8734948958377	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATTGAGACATTTATTT	48	True	NA	NA	False	NA	NA	NA	24033509	24061203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24049404_24049549_24057930
transcript_69012.known	chr19	+	511	4	FSM	ENSG00000213096.11	ENST00000339642.10	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	46.4494946749214	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	-9	True	NA	12	True	AATAAA	-13	NA	24087183	24107349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24107215
transcript_69013.known	chr19	+	4089	4	FSM	ENSG00000213096.11	ENST00000357002.5	4089	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	40.5490101262931	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTAAGTATGTTTG	-6	True	NA	NA	False	AATAAA	-1	NA	24087186	24129968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24126253
transcript_69018.known	chr19	+	928	3	FSM	ENSG00000268362.6	ENST00000656966.1	928	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTTAGAAAACTTTTG	22	True	NA	NA	False	AATAAA	-30	NA	24033483	24037405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24036252_24036383_24036745
transcript_69019.known	chr19	+	3982	3	FSM	ENSG00000213096.11	ENST00000611359.3	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	53	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	2	True	NA	NA	False	ATTAAA	-34	NA	24087159	24129961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24087338_24106547_24106644_24126253
transcript_69020.nic	chr19	+	1116	3	ISM	ENSG00000213096.11	ENST00000339642.10	511	4	-30	-3	-6	0	intron_retention	FALSE	canonical	3	33	junction_1	42.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCCTCTCTAATTTT	-4	True	NA	15	True	AATAAA	-16	NA	24087153	24107352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_24087338_24105939_24106067_24106547
transcript_69021.known	chr19	+	819	2	FSM	ENSG00000268362.6	ENST00000664197.1	819	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGCATTTACTTTAG	-9	True	NA	NA	False	AATAAA	-20	NA	24033452	24037395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24036745
transcript_69022.known	chr19	-	1352	6	FSM	ENSG00000261824.8	ENST00000667518.1	1352	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.2150507187616	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGAAAATGCTTTG	507	False	27793428	NA	False	AGTAAA	-36	NA	27793408	27681084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27681356_27684505_27684608_27701490_27701646_27732795_27732968_27746097_27746341_27792999
transcript_69024.known	chr19	-	1349	5	FSM	ENSG00000261824.8	ENST00000668560.1	1349	5	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	31.2279922505434	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGACAGTCTGCAAACA	11	True	NA	NA	False	ATTAAA	-11	NA	27793249	27726482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27726987_27727816_27727980_27732795_27732968_27746080_27746341_27792999
transcript_69026.known	chr19	-	3141	4	FSM	ENSG00000261824.8	ENST00000659785.1	3141	4	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	35.1220095603249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATATCCCGCAATAA	-18	True	NA	NA	False	NA	NA	NA	27793401	27713551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27715859_27732795_27732968_27746080_27746341_27792999
transcript_69028.nic	chr19	-	1423	4	FSM	ENSG00000261824.8	ENST00000687807.1	908	4	-515	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	31.7944789057611	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	22	True	NA	-2	True	AATAAA	-27	NA	27793893	27721701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999
transcript_69029.known	chr19	-	1908	4	FSM	ENSG00000261824.8	ENST00000657730.1	1908	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	28.5462587546755	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGATGTCTGGATT	16	True	NA	NA	False	AATAAA	-27	NA	27793899	27727386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27727980_27732795_27732968_27746097_27746341_27792999
transcript_6903.known	chr1	-	461	5	FSM	ENSG00000122417.15	ENST00000462648.5	461	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	45.102660675397	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGAAGTCGGAAAATCAAA	6824	False	NA	10	True	NA	NA	NA	86355383	86348831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86355344
transcript_69030.known	chr19	-	1081	4	FSM	ENSG00000261824.8	ENST00000660820.1	1081	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	35.9845645921816	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTGTGATGTGTGGATT	5	True	NA	NA	False	AATAAA	-34	NA	27793378	27728207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27728495_27732795_27732968_27746097_27746341_27792999
transcript_69031.known	chr19	-	2643	4	FSM	ENSG00000261824.8	ENST00000656170.1	2643	4	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	35.1220095603249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTATGAAAATGCCTTG	5	True	NA	NA	False	AATAAA	-21	NA	27793378	27728220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27730053_27732795_27732968_27746080_27746341_27792999
transcript_69033.known	chr19	-	3731	4	FSM	ENSG00000261824.8	ENST00000661680.2	4262	4	531	0	-3	0	multi-exon	TRUE	canonical	3	33	junction_1	20.7257220756131	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	-8	True	NA	NA	False	NA	NA	NA	27793391	27727783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999
transcript_69042.known	chr19	-	4506	5	FSM	ENSG00000261824.8	ENST00000665874.1	4506	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	27.617928959283	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAATGCTTTATGATG	-23	True	NA	NA	False	AAGAAA	-19	NA	27793938	27727881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27771663_27771990_27792999
transcript_69045.known	chr19	-	669	2	FSM	ENSG00000261824.8	ENST00000586248.5	669	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGGCGACCTTCGACA	5	True	NA	NA	False	NA	NA	NA	27793378	27773962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27774253_27792999
transcript_69047.known	chr19	-	2317	2	FSM	ENSG00000261824.8	ENST00000663492.1	2317	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTCTAAGGACTGTGGA	NA	False	NA	NA	False	TATAAA	-25	NA	27794003	27776325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27777639_27792999
transcript_69048.known	chr19	-	1131	5	FSM	ENSG00000261824.8	ENST00000655166.2	1132	5	1	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	27.5533573271934	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	15	True	NA	-2	True	AATAAA	-27	NA	27793900	27721701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_69049.known	chr19	-	1625	5	FSM	ENSG00000261824.8	ENST00000659734.1	1625	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	24.8042335096249	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGATGTCTGGATT	0	True	NA	NA	False	AATAAA	-27	NA	27793915	27727386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27727980_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_6905.known	chr1	-	1650	2	FSM	ENSG00000122417.15	ENST00000478286.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGTTTCGAGCTACTT	-22	True	NA	NA	False	AATAAA	-29	NA	86396323	86385727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86387087_86396032
transcript_69050.known	chr19	-	1999	3	FSM	ENSG00000261824.8	ENST00000590523.2	1999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATCTTTCTTTTTTTTT	24	True	NA	NA	False	AATAAA	-20	NA	27793891	27790492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27791902_27792999_27793230_27793531
transcript_69051.known	chr19	-	1122	3	FSM	ENSG00000261824.8	ENST00000671227.1	1122	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGCTAAAGCCATCTTGT	-18	True	NA	NA	False	NA	NA	NA	27793933	27773765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27774253_27792999_27793233_27793531
transcript_69054.known	chr19	+	1796	3	FSM	ENSG00000267575.8	ENST00000592404.6	1796	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAGTATAACTATAAA	-25	True	NA	NA	False	AATAGA	-11	NA	27793451	27800391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793651_27797753_27798177_27799217
transcript_69055.known	chr19	+	1824	3	FSM	ENSG00000267575.8	ENST00000585917.6	1824	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGGCTTGTAATTT	8379	False	NA	NA	False	AATAAA	-24	NA	27793430	27806785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793651_27797753_27798177_27805604
transcript_69056.known	chr19	+	1755	3	FSM	ENSG00000267575.8	ENST00000668414.1	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAGTATAACTATAAA	-25	True	NA	NA	False	AATAGA	-11	NA	27793451	27800391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793610_27797753_27798177_27799217
transcript_69057.known	chr19	+	1759	3	FSM	ENSG00000267575.8	ENST00000659857.2	1764	3	5	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	-25	True	NA	NA	False	AATAAA	-21	NA	27793451	27806782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793610_27797753_27798177_27805604
transcript_69058.known	chr19	+	5152	3	FSM	ENSG00000267575.8	ENST00000667196.1	5152	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTATTTTCATTTAC	8395	False	NA	NA	False	NA	NA	NA	27793446	27830697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793610_27797753_27798177_27826131
transcript_69061.nic	chr19	+	1790	3	FSM	ENSG00000267575.8	ENST00000693578.1	1229	3	-17	-544	0	205	multi-exon	FALSE	canonical	2	2	junction_1	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAACTCCTAGAGACA	8394	False	NA	NA	False	AATACA	-28	NA	27793445	27807326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793651_27805604_27806186_27806322
transcript_69064.known	chr19	+	808	3	FSM	ENSG00000267575.8	ENST00000668903.1	808	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAACACCAAACACT	-13	True	NA	NA	False	AATGAA	-22	NA	27794017	27826411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27794123_27797753_27798177_27826131
transcript_69065.known	chr19	+	1451	3	FSM	ENSG00000267575.8	ENST00000663452.2	1486	3	35	0	13	0	multi-exon	FALSE	canonical	1	1	junction_1	4	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAATGAAAATATTTGGC	21	True	NA	NA	False	AATAAA	-16	NA	27794051	27807121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27794123_27805604_27806186_27806322
transcript_69067.nic	chr19	+	846	2	ISM	ENSG00000267575.8	ENST00000592404.6	1796	3	-101	2092	-80	-16	5prime_fragment	FALSE	canonical	3	23	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAGAACAAAACAGC	8299	False	NA	NA	False	NA	NA	NA	27793350	27798299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_27793651_27797753
transcript_69068.known	chr19	+	656	2	FSM	ENSG00000267575.8	ENST00000586784.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	27793482	27798282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793610_27797753
transcript_69069.known	chr19	+	1335	2	FSM	ENSG00000267575.8	ENST00000590628.1	1335	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	17	True	NA	NA	False	AATAAA	-21	NA	27793493	27806782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793651_27805604
transcript_6907.known	chr1	-	311	2	FSM	ENSG00000122417.15	ENST00000486215.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCCAAATCTAGTATT	324	False	NA	1	True	TATAAA	-36	NA	86395977	86386808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86387087_86395944
transcript_69070.nic	chr19	+	696	2	ISM	ENSG00000267575.8	ENST00000587188.2	1696	3	-54	2095	2	14	5prime_fragment	FALSE	canonical	3	19	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAGAACAAAAC	452	False	NA	NA	False	NA	NA	NA	27793969	27798296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_27794123_27797753
transcript_69071.known	chr19	+	539	2	FSM	ENSG00000267575.8	ENST00000585827.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCAGGTGAAGGTGGG	8	True	NA	NA	False	NA	NA	NA	27794038	27795152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27794123_27794697
transcript_69072.known	chr19	+	1904	2	FSM	ENSG00000267575.8	ENST00000669826.1	1904	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTCAAAGTGTTAATTT	-7	True	NA	NA	False	AATAAA	-28	NA	27794023	27796486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27794123_27794681
transcript_69074.known	chr19	+	855	3	FSM	ENSG00000267575.8	ENST00000661017.1	855	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGAATATAGCTGGGCC	-13	True	NA	NA	False	AAAACA	-9	NA	27794017	27798315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27794123_27794681_27794870_27797753
transcript_69075.known	chr19	+	736	3	FSM	ENSG00000267575.8	ENST00000660309.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCAATAGCCTGTT	4	True	NA	NA	False	ATTAAA	-21	NA	27794034	27826336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27794143_27797753_27798177_27826131
transcript_69076.known	chr19	+	635	1	FSM	ENSG00000281468.1	ENST00000621046.2	635	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTATTGCGTTTTTCAAA	8807	False	NA	21	True	AATAAA	-18	NA	27802837	27803472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27802800_27803500
transcript_69081.nnic	chr19	-	1656	2	NNC	ENSG00000260725.1	novel	1570	2	NA	NA	6021	36	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTGGTTGCTTTCAAC	NA	False	NA	0	True	ATTAAA	-18	NA	28423469	28418446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_28419912_28423278
transcript_6909.known	chr1	+	6456	10	FSM	ENSG00000097033.14	ENST00000616170.4	6456	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	105.599873737298	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACATTGTGTTGCTAA	-9	True	NA	14	True	AATAAA	-8	NA	86704569	86748176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86728402_86728490_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_69094.nnic	chr19	-	1110	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-24	-1946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1646	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTGTAACTGA	25	False	29213200	-14	True	ATTAAA	-25	NA	29213175	29207265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_29208159_29212904_29213002_29213055
transcript_69095.nnic	chr19	-	1106	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-23	-1946	at_least_one_novel_splicesite	FALSE	non_canonical	2	29	junction_2	1631.5	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTGTAACTGA	26	False	29213200	-14	True	ATTAAA	-25	NA	29213174	29207265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_69097.nnic	chr19	-	988	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-24	-2068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1646	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	25	False	29213200	-69	True	AATAAA	-18	NA	29213175	29207387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_29208159_29212904_29213002_29213055
transcript_69098.nnic	chr19	-	984	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-23	-2068	at_least_one_novel_splicesite	FALSE	non_canonical	2	29	junction_2	1631.5	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	26	False	29213200	-69	True	AATAAA	-18	NA	29213174	29207387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_69099.known	chr19	-	3086	2	FSM	ENSG00000169021.6	ENST00000304863.6	3086	2	0	0	0	0	multi-exon	FALSE	canonical	3	3292	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTCGTTTGAATTT	-7	True	NA	NA	False	ACTAAA	-15	NA	29213151	29205319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29208159_29212904
transcript_6910.known	chr1	+	6371	9	FSM	ENSG00000097033.14	ENST00000370558.8	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_5	29.2435890410189	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGCTAAATCTCGTA	-3	True	NA	22	True	AATAAA	-16	NA	86704575	86748184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_69100.known	chr19	+	709	2	FSM	ENSG00000267498.2	ENST00000587859.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTAGCACACTGGCAT	NA	False	NA	NA	False	ATTAAA	-18	NA	29213234	29215815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29213409_29215280
transcript_69103.known	chr19	+	846	7	FSM	ENSG00000105171.10	ENST00000591824.5	846	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	88.2685296882945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTAAGCCAATTCCATT	13	True	NA	NA	False	NA	NA	NA	29606302	29615458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29606326_29608656_29608710_29610319_29610633_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_69104.known	chr19	+	579	7	FSM	ENSG00000105171.10	ENST00000586420.5	579	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	89.0636476534244	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTGGAAACCGATGG	-7	True	NA	NA	False	NA	NA	NA	29606282	29615266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29606326_29608656_29608710_29610408_29610633_29611867_29611940_29612116_29612179_29613870_29613973_29615243
transcript_69110.known	chr19	+	2321	6	FSM	ENSG00000105171.10	ENST00000221770.7	2321	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	84.5444261912044	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGGTACCACTTGCCA	4	True	NA	21	True	AATACA	-19	NA	29606293	29617237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29606326_29608656_29608710_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_69118.known	chr19	+	1699	2	FSM	ENSG00000166289.6	ENST00000436066.4	1699	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTGTCCTTGCTTC	1	True	NA	33	True	AATAAA	-36	NA	29665460	29675477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29665506_29673823
transcript_6912.known	chr1	+	6227	8	FSM	ENSG00000097033.14	ENST00000535010.5	6227	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	92.1035353528289	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACATTGTGTTGCTAA	-9	True	NA	14	True	AATAAA	-8	NA	86704569	86748176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86704972_86719506_86719636_86722539_86722674_86724312_86724406_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_69120.known	chr19	-	578	4	FSM	ENSG00000131943.20	ENST00000342680.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	21.4527905462721	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGACGGACGCCGTGC	-19	True	NA	NA	False	NA	NA	NA	29715275	29702841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29705273_29705395_29708253_29708424_29715124
transcript_69122.known	chr19	-	4265	3	FSM	ENSG00000131943.20	ENST00000623113.3	3726	3	0	-539	0	-100	multi-exon	FALSE	canonical	3	4	junction_2	23.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCCTGGTGTGAATT	455	False	NA	-5	True	NA	NA	NA	29715060	29699036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29708253_29708424_29714906
transcript_69123.known	chr19	-	4348	3	FSM	ENSG00000131943.20	ENST00000323670.14	4348	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	2.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTGGGATTCATT	-5	True	NA	95	True	NA	NA	NA	29715261	29698936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29708253_29708424_29715124
transcript_69124.known	chr19	-	1188	2	FSM	ENSG00000131943.20	ENST00000392275.1	1188	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTTCTCATCTTGGGAG	58	False	NA	NA	False	NA	NA	NA	29715457	29702340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29714906
transcript_69125.known	chr19	-	1912	2	FSM	ENSG00000131943.20	ENST00000392276.1	1912	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTCCCACATATTAT	294	False	NA	-15	True	AATAAA	-15	NA	29715221	29701162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29715124
transcript_69130.known	chr19	+	1680	10	FSM	ENSG00000105173.14	ENST00000444983.6	1680	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	27.13932957677	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCAGTTGACAGTGT	7	False	NA	-79	True	GGGGCT	-10	NA	29812653	29824212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29821995_29822131_29822239_29822352_29822445_29822604_29823654
transcript_69132.known	chr19	+	3460	11	FSM	ENSG00000105176.18	ENST00000392271.6	3460	11	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_2	77.6237077187118	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTTTGAGCCTGTCTA	-17	True	NA	7	True	ATTAAA	-21	NA	29942238	30016612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29942665_29971192_29971228_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30014886
transcript_69134.known	chr19	-	441	2	FSM	ENSG00000121297.8	ENST00000558569.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTGCAGTAATATCTC	1619	False	NA	NA	False	AATAAA	-19	NA	31349255	31308344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_31308710_31349179
transcript_69135.known	chr19	+	7716	7	FSM	ENSG00000168813.17	ENST00000355898.6	7716	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	8.80814017448254	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	-10	True	NA	NA	False	AATAAA	-13	NA	32345609	32387667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_69137.known	chr19	+	7638	6	FSM	ENSG00000168813.17	ENST00000311921.8	7638	6	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	30.6920185064456	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	-26	True	NA	NA	False	AATAAA	-13	NA	32345593	32387667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32345784_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_69139.nnic	chr19	+	1180	3	NNC	ENSG00000168813.17	novel	5560	4	NA	NA	-4	-10079	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	36	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGGATTGGCCTTAAG	-14	True	NA	NA	False	AATAAA	-29	NA	32345605	32349714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_32345784_32347244_32347339_32348806
transcript_6914.nic	chr1	+	445	4	ISM	ENSG00000097033.14	ENST00000482504.1	1199	11	-61	20693	-61	-16120	5prime_fragment	FALSE	canonical	3	246	junction_2	16.3571255285137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGAACAGCAGACAGA	23	True	NA	NA	False	ATTAAA	-20	NA	86704833	86722575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539
transcript_69141.nic	chr19	+	582	2	ISM	ENSG00000168813.17	ENST00000587084.5	5560	4	-19	12145	-4	-12145	5prime_fragment	FALSE	canonical	3	72	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACAAAATTTGAATATTA	-14	True	NA	NA	False	NA	NA	NA	32345605	32347648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_32345784_32347244
transcript_69144.nnic	chr19	-	1095	4	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	6.59966329107444	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	NA	False	NA	0	True	AATAAA	-24	NA	32405612	32390049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32390334_32391115_32391187_32399750_32399869_32404990
transcript_69145.nnic	chr19	-	559	4	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_3	9.41629792788369	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	NA	False	NA	0	True	AATAAA	-24	NA	32405603	32390049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32390334_32391115_32391187_32399750_32399869_32405517
transcript_69149.known	chr19	-	972	3	FSM	ENSG00000267213.4	ENST00000592680.2	972	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	NA	False	NA	0	True	AATAAA	-24	NA	32405560	32390049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32390334_32399750_32399869_32404990
transcript_6915.known	chr1	+	555	1	FSM	ENSG00000230721.1	ENST00000447415.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	86784912	86785467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86784900_86785500
transcript_69151.nnic	chr19	-	975	3	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	11	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	NA	False	NA	0	True	AATAAA	-24	NA	32405610	32390049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32390334_32391115_32391187_32404990
transcript_69153.nnic	chr19	-	442	3	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	12	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	NA	False	NA	0	True	AATAAA	-24	NA	32405604	32390049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32390334_32391115_32391187_32405517
transcript_69155.known	chr19	+	601	6	FSM	ENSG00000105185.12	ENST00000586035.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	809.613389217347	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATAAAACATTTGGGT	45	False	NA	5	True	AATAAA	-9	NA	32581525	32587414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32581701_32582194_32582233_32584949_32585012_32585815_32585908_32586857_32586930_32587252
transcript_69157.known	chr19	+	558	6	FSM	ENSG00000105185.12	ENST00000221784.8	558	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	798.140188187514	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGTAAGTTGTTTTA	-14	True	NA	16	True	AATAAA	-20	NA	32581201	32587425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32581328_32582194_32582233_32584954_32585012_32585815_32585908_32586857_32586930_32587252
transcript_69158.known	chr19	+	468	5	FSM	ENSG00000105185.12	ENST00000592786.5	468	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	853.497913002721	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGGCCAGATCTGT	16	True	NA	43	True	AATAAA	-29	NA	32581231	32587452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32586857_32586930_32587252
transcript_69159.known	chr19	+	1799	4	FSM	ENSG00000105185.12	ENST00000419343.7	1799	4	0	0	0	0	multi-exon	FALSE	canonical	3	1845	junction_1	97.5602378020882	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCTTTTAAAAAAATAAAC	-15	True	NA	-22	True	NA	NA	NA	32581200	32587387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32585815
transcript_69161.known	chr19	-	4432	29	FSM	ENSG00000105186.16	ENST00000306065.9	4432	29	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_13	22.0923386849701	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATGGTATTTTTTT	-7	True	NA	-12	True	AGTAAA	-16	NA	32675180	32597005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_69181.known	chr19	-	5673	19	FSM	ENSG00000121289.18	ENST00000305768.10	5673	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	19.1369334592098	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTCCTGAGTGTTT	-8	True	NA	-13	True	ATTAAA	-17	NA	32971958	32875924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_69187.nic	chr19	-	1677	14	ISM	ENSG00000121289.18	ENST00000305768.10	5673	19	-28	39412	5	15870	5prime_fragment	FALSE	canonical	0	0	junction_2	21.7133013524269	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTAATGTTTTTT	-36	True	NA	0	True	ATTAAA	-4	NA	32971986	32915336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_69189.known	chr19	-	1340	9	FSM	ENSG00000121289.18	ENST00000590597.6	1340	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	10.8021988502342	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTACAAAGTAAAAGAGGC	-13	True	NA	NA	False	AATAAA	-38	NA	32971963	32931206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_69190.nic	chr19	-	952	8	ISM	ENSG00000121289.18	ENST00000590597.6	1340	9	-23	2290	5	-2290	5prime_fragment	FALSE	canonical	3	65	junction_1	6.71580529916752	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAGAAAGCTCAAAGA	-36	True	NA	NA	False	AATGAA	-35	NA	32971986	32933496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_69191.nic	chr19	-	880	7	ISM	ENSG00000121289.18	ENST00000590597.6	1340	9	-23	6323	5	0	5prime_fragment	FALSE	canonical	3	75	junction_5	4.6785562825394	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTGTTGAACTTTCACC	-36	True	NA	0	True	AATAAA	-24	NA	32971986	32937529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_69198.known	chr19	-	2903	2	FSM	ENSG00000121289.18	ENST00000591863.1	2903	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	-41	False	NA	-1	True	AATAAA	-19	NA	32971991	32968908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32971656_32971835
transcript_69199.known	chr19	-	558	2	FSM	ENSG00000121289.18	ENST00000592401.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCACACCCCGGCCTCC	34	True	NA	NA	False	NA	NA	NA	32971916	32971172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32971650_32971835
transcript_69200.known	chr19	-	682	6	FSM	ENSG00000121289.18	ENST00000593276.2	682	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	2.31516738055805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTGTTGAACTTTCACC	5531	False	NA	0	True	AATAAA	-24	NA	32966419	32937529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359
transcript_69201.known	chr19	+	2313	5	FSM	ENSG00000131944.10	ENST00000588258.6	2313	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	6.10327780786685	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAAATTAGCCAGGCA	-18	True	NA	NA	False	NA	NA	NA	32972241	32978229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32972347_32973183_32973303_32973425_32973563_32974059_32974213_32976430
transcript_69203.known	chr19	+	875	5	FSM	ENSG00000131944.10	ENST00000254262.9	875	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	16.5887763261791	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGGATCATCTGAGGT	NA	False	NA	NA	False	NA	NA	NA	32972208	32976816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32972347_32973183_32973303_32973483_32973563_32974059_32974213_32976430
transcript_69205.known	chr19	+	865	5	FSM	ENSG00000131944.10	ENST00000590281.1	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.1796589626978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGACAGCGGATCATCTG	44	False	NA	NA	False	NA	NA	NA	32972303	32976812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32972378_32973183_32973303_32973425_32973563_32974059_32974213_32976430
transcript_69209.known	chr19	+	836	4	FSM	ENSG00000131944.10	ENST00000589646.5	836	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.9814733091416	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGCCAACATGGAGA	NA	False	NA	NA	False	NA	NA	NA	32972220	32976850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32972347_32973425_32973563_32974059_32974213_32976430
transcript_69210.known	chr19	+	784	3	FSM	ENSG00000131944.10	ENST00000590179.1	784	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGCAGTGAGCTGAGAT	0	True	NA	NA	False	NA	NA	NA	32972259	32976974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32972347_32974059_32974213_32976430
transcript_69214.known	chr19	-	3501	15	FSM	ENSG00000131941.8	ENST00000254260.8	3501	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	11.1586426648786	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTCTTTTTACTT	-4	True	NA	-6	True	AATAAA	-18	NA	33064888	32978591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32980257_32990513_32990670_32991822_32991970_32993976_32994054_32996025_32996221_32999585_32999706_33002246_33002404_33002812_33003001_33008013_33008181_33011678_33011804_33012646_33012725_33021570_33021647_33026503_33026633_33044248_33044365_33064783
transcript_69218.nic	chr19	-	1055	7	ISM	ENSG00000131941.8	ENST00000254260.8	3501	15	0	29163	0	-13733	5prime_fragment	FALSE	canonical	3	51	junction_5	8.25462833135986	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTGCTCGGTGGTTC	-4	True	NA	NA	False	NA	NA	NA	33064888	33007754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_33008181_33011678_33011804_33012646_33012725_33021570_33021647_33026503_33026633_33044248_33044365_33064783
transcript_69220.nic	chr19	-	872	3	ISM	ENSG00000131941.8	ENST00000588388.5	2378	14	0	46343	0	-31960	5prime_fragment	FALSE	canonical	3	51	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAATGAACACAGTATAAAA	-4	True	NA	NA	False	AAAACA	-23	NA	33064888	33025981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_33026633_33044248_33044365_33064783
transcript_69224.known	chr19	+	3191	20	FSM	ENSG00000076650.7	ENST00000170564.7	3191	20	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_13	9.73271605323268	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCGTTTTTTGGGA	-5	True	NA	NA	False	NA	NA	NA	33081180	33130542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104_33125203_33126587_33126734_33130129
transcript_69226.nic	chr19	+	1014	8	ISM	ENSG00000076650.7	ENST00000170564.7	3191	20	-2	32641	-2	-11976	5prime_fragment	FALSE	canonical	3	74	junction_6	7.55658923167897	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAATTCGACAGCCACAAA	-7	True	NA	NA	False	TATAAA	-10	NA	33081178	33097901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754
transcript_69228.known	chr19	+	511	1	FSM	ENSG00000273420.1	ENST00000609744.1	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTCTGCGTCCTTT	NA	False	NA	18	True	AATACA	-12	NA	33207128	33207639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33207100_33207600
transcript_69229.known	chr19	+	2198	1	FSM	ENSG00000267296.2	ENST00000592982.2	2198	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGGTAGGGTCCTAATT	25	True	NA	3	True	ATTAAA	-14	NA	33302856	33305054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33302900_33305100
transcript_6923.known	chr1	-	831	5	FSM	ENSG00000183291.18	ENST00000469566.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	530.51454975335	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGATTTCTAAATTAGA	NA	False	NA	NA	False	NA	NA	NA	86914424	86863166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914314
transcript_69230.known	chr19	+	3730	2	FSM	ENSG00000153879.9	ENST00000284000.9	3730	2	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_1	0	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTTCATCGTGGCTT	-52	True	NA	18	True	AATAAA	-21	NA	33373708	33382686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33373896_33379143
transcript_69239.known	chr19	-	1907	15	FSM	ENSG00000124299.15	ENST00000244137.12	1907	15	0	0	0	0	multi-exon	TRUE	canonical	3	668	junction_14	58.0550407380965	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCGTGGCTTCCCCT	-8	True	NA	-1	True	AATAAA	-19	NA	33521791	33386949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_69240.known	chr19	-	1754	13	FSM	ENSG00000124299.15	ENST00000397032.8	1754	13	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_6	217.603040726304	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAATAAAAGGTTTCC	-8	True	NA	-31	True	NA	NA	NA	33521791	33386979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_69241.known	chr19	-	1020	9	FSM	ENSG00000124299.15	ENST00000651646.1	1020	9	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_8	52.5700425622807	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCATTATGTCTGCTG	25	False	NA	NA	False	AGTAAA	-26	NA	33521758	33462643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_69242.known	chr19	-	1804	16	FSM	ENSG00000124299.15	ENST00000651901.1	1804	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	260.314032575187	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATGATTGAAAATAAT	27	False	NA	-25	True	ATTAAA	-9	NA	33521756	33387107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33387482_33387654_33387745_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_69243.known	chr19	-	483	1	FSM	ENSG00000232429.3	ENST00000497298.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACTTGTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	33589688	33589205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33589200_33589700
transcript_69244.known	chr19	+	2040	1	FSM	ENSG00000277013.1	ENST00000610908.1	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCTTCCTACCAAT	562	False	NA	17	True	AATAAA	-21	NA	33906351	33908391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33906400_33908400
transcript_69247.known	chr19	+	3424	11	FSM	ENSG00000257103.9	ENST00000433627.9	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_10	333.46813940765	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	42	False	NA	23	True	AATAAA	-17	NA	34172567	34229288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
transcript_69249.known	chr19	+	3431	10	FSM	ENSG00000257103.9	ENST00000544216.8	3431	10	0	0	0	0	multi-exon	TRUE	canonical	3	725	junction_9	165.531541882581	2530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	-22	True	NA	23	True	AATAAA	-17	NA	34172503	34229288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364
transcript_69267.nic	chr19	+	374	2	ISM	ENSG00000166398.14	ENST00000589583.5	582	3	-161	710	-132	-227	5prime_fragment	FALSE	canonical	3	89	junction_1	0	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTTTCAGGAAACATTA	NA	False	NA	NA	False	AAAAAG	-6	NA	34254419	34299857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_34254615_34299678
transcript_69268.known	chr19	+	6680	14	FSM	ENSG00000166398.14	ENST00000299505.8	6680	14	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_2	9.1806330755912	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATCCTTGTTTAAAA	-14	True	NA	NA	False	ATTAAA	-19	NA	34254553	34355566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34254615_34299678_34300969_34319906_34320117_34327420_34327562_34327770_34327867_34327989_34328152_34330188_34330348_34333703_34333802_34339866_34339993_34341421_34342456_34347876_34348043_34349015_34349154_34351513_34351593_34352646
transcript_69269.known	chr19	+	856	2	FSM	ENSG00000166398.14	ENST00000592124.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATGTATTGCTGCAGTGC	4452	False	NA	NA	False	NA	NA	NA	34265557	34300470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34265622_34299678
transcript_69270.known	chr19	+	4341	19	FSM	ENSG00000105220.17	ENST00000415930.8	4341	19	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	291.290021358799	1107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	5015	False	NA	31	True	AATAAA	-20	NA	34364739	34402413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34365020_34365259_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_69277.nnic	chr19	+	959	5	NIC	ENSG00000126249.8	novel	1157	7	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	87.7507122478217	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATGTACCTTAT	2	True	NA	15	True	ATTAAA	-20	NA	34404368	34426168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34404539_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_69280.known	chr19	+	1157	7	FSM	ENSG00000126249.8	ENST00000246535.4	1157	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	13.5113121330075	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATGTACCTTAT	-10	True	NA	15	True	ATTAAA	-20	NA	34404398	34426168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34404539_34404648_34404816_34404929_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_69281.known	chr19	+	1227	6	FSM	ENSG00000126249.8	ENST00000587385.6	1227	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	14.1788574998129	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTTTACATCCAAATA	16	True	NA	-3	True	ATTAAA	-2	NA	34404424	34426150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34404539_34404648_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_69284.known	chr19	+	4005	17	FSM	ENSG00000126261.13	ENST00000246548.9	4005	17	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	94.4675870338605	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTTCCTTGTGTAAT	-9	True	NA	27	True	ACTAAA	-19	NA	34428380	34471251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_69296.known	chr19	+	344	3	FSM	ENSG00000126261.13	ENST00000592841.5	344	3	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	83.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTAAACAGTGGTGGT	94	False	NA	NA	False	TTTAAA	-18	NA	34428483	34432033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34428571_34430575_34430660_34431860
transcript_69297.known	chr19	-	612	3	FSM	ENSG00000268751.2	ENST00000687185.1	712	3	96	4	-36	0	multi-exon	FALSE	canonical	3	19	junction_1	11.5	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	97	False	NA	-5	True	AATAAA	-15	NA	34577701	34576732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34576995_34577265_34577457_34577542
transcript_69303.known	chr19	+	675	5	FSM	ENSG00000089335.22	ENST00000506901.5	675	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	94.2745326161843	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	3	True	NA	NA	False	NA	NA	NA	34677653	34684172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34677863_34678736_34678814_34682776_34682898_34683151_34683239_34683991
transcript_69304.nic	chr19	+	2633	5	NIC	ENSG00000089335.22	novel	2590	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	91.9493746580149	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	1	True	NA	24	True	AATAAA	-34	NA	34677651	34686391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34677863_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_69305.nic	chr19	+	638	5	NIC	ENSG00000089335.22	novel	675	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	89.085282173881	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	8	True	NA	NA	False	NA	NA	NA	34677658	34684172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34683991
transcript_69306.known	chr19	+	2600	5	FSM	ENSG00000089335.22	ENST00000457781.6	2600	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	59.9103496901829	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCTGTGACTGTTTG	11	False	NA	30	True	AATAAA	-40	NA	34677661	34686397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_69307.known	chr19	+	578	5	FSM	ENSG00000089335.22	ENST00000502743.5	578	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	103.582093047013	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTCCACTGTAGAAGC	-4	True	NA	NA	False	NA	NA	NA	34677646	34684137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34677797_34678736_34678814_34682776_34682898_34683154_34683239_34683991
transcript_69309.known	chr19	+	2955	5	FSM	ENSG00000089335.22	ENST00000505365.2	2955	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	99.3035120224859	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTCTGTGACTGTTT	98	False	NA	29	True	AATAAA	-39	NA	34677835	34686396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683154_34683239_34683991
transcript_6931.known	chr1	-	1542	5	FSM	ENSG00000183291.18	ENST00000331835.10	1542	5	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	91.5027321996453	4674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGTGTGGTTCAAAGT	-2	True	NA	-5	True	ATTAAA	-21	NA	86914126	86862444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914027
transcript_69310.known	chr19	+	2853	5	FSM	ENSG00000089335.22	ENST00000505242.6	2853	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	80.5946648358314	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTCTGTGACTGTTT	-11	True	NA	29	True	AATAAA	-39	NA	34677677	34686396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_69318.known	chr19	+	2590	5	FSM	ENSG00000089335.22	ENST00000423823.6	2590	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.6386004807846	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	0	True	NA	24	True	AATAAA	-34	NA	34677688	34686391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34677857_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_69319.known	chr19	-	540	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAGAGAGACAGGGAG	6	True	NA	1	True	ATTAAA	-23	NA	34733837	34733297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34733300_34733800
transcript_6932.known	chr1	-	1835	6	NNC	ENSG00000183291.18	novel	1502	6	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	496.196090270772	459	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGTGTGGTTCAAA	NA	False	NA	-7	True	ATTAAA	-19	NA	86914424	86862446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_86863606_86868052_86868103_86880661_86880690_86880692_86880726_86903280_86903449_86914027
transcript_69320.known	chr19	+	567	5	FSM	ENSG00000197841.15	ENST00000595708.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.4055915910215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCCCCACTGCAGACA	2	True	NA	NA	False	NA	NA	NA	34734245	34740818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34734311_34734969_34735047_34739147_34739269_34739525_34739622_34740610
transcript_69321.known	chr19	+	2265	4	FSM	ENSG00000197841.15	ENST00000459757.6	2265	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	15.8394724940223	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGGAAGACCTTTTAGC	331	False	NA	NA	False	NA	NA	NA	34734574	34742186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34735047_34739147_34739269_34739525_34739622_34740610
transcript_69324.known	chr19	-	948	3	FSM	ENSG00000153896.19	ENST00000588760.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	4.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	12	True	NA	3	True	AATAAA	-30	NA	34773200	34766967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34767412_34769428_34769556_34772823
transcript_69329.known	chr19	-	939	4	FSM	ENSG00000271109.2	ENST00000665881.1	939	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10.8423039781937	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860715	34849047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860533
transcript_6933.known	chr1	-	1220	4	FSM	ENSG00000183291.18	ENST00000370554.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	576.557600476021	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAATTTGGAATTC	-10	True	NA	-15	True	AATAAA	-13	NA	86914134	86862724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86863606_86880661_86880726_86903280_86903449_86914027
transcript_69332.known	chr19	-	874	3	FSM	ENSG00000271109.2	ENST00000661859.1	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	25	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860691	34849047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34860173_34860303_34860448
transcript_69333.nnic	chr19	-	845	3	NNC	ENSG00000271109.2	novel	874	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	26.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-2	True	AATAAA	-18	NA	34860685	34849047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_34849550_34860173_34860303_34860471
transcript_69334.known	chr19	-	847	3	FSM	ENSG00000271109.2	ENST00000653487.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	14.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	0	True	AATAAA	-20	NA	34860747	34849045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34860173_34860303_34860533
transcript_69335.known	chr19	-	1142	3	FSM	ENSG00000271109.2	ENST00000657506.1	1142	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	0	True	AATAAA	-20	NA	34860685	34849045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34850668_34850795_34860173
transcript_69339.known	chr19	-	1046	2	FSM	ENSG00000271109.2	ENST00000655389.1	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	0	True	AATAAA	-20	NA	34860715	34849045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34860173
transcript_69340.known	chr19	-	628	2	FSM	ENSG00000271109.2	ENST00000657568.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACGGGTCTCATATTTTT	NA	False	NA	-4	True	AATAAA	-16	NA	34850796	34849049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34850668
transcript_69341.known	chr19	-	872	4	FSM	ENSG00000271109.2	ENST00000603718.2	872	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGGGTCTCATATTTT	NA	False	NA	-5	True	AATAAA	-15	NA	34860566	34849050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860448
transcript_69342.known	chr19	+	1657	2	FSM	ENSG00000269037.1	ENST00000595783.1	1657	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCATATGTAAATATGT	40	False	NA	1	True	ATTAAA	-13	NA	34905314	34908188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34906225_34907441
transcript_69343.nic	chr19	+	2690	6	NIC	ENSG00000168661.15	novel	2583	6	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	8.72696969170857	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	NA	False	NA	6	True	AATAAA	-20	NA	34926875	34945168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34942593_34942674_34943222
transcript_69344.known	chr19	+	2583	6	FSM	ENSG00000168661.15	ENST00000601957.5	2583	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.70522184569608	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	23	False	NA	6	True	AATAAA	-20	NA	34926979	34945168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34942593_34942674_34943222
transcript_69346.nic	chr19	+	2585	6	NIC	ENSG00000168661.15	novel	2583	6	NA	NA	64	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	8	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	-4	True	NA	6	True	AATAAA	-20	NA	34927043	34945168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34927283_34929883_34929957_34931842_34931994_34933627_34933724_34942593_34942674_34943222
transcript_69347.known	chr19	+	2579	5	FSM	ENSG00000168661.15	ENST00000303586.11	2579	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	10.0591997693654	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	-14	True	NA	2	True	AATAAA	-16	NA	34926902	34945164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_69348.known	chr19	+	2580	5	FSM	ENSG00000168661.15	ENST00000601142.2	2580	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	7.82224392358101	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	-14	True	NA	6	True	AATAAA	-20	NA	34926902	34945168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34943222
transcript_69349.known	chr19	+	2651	5	FSM	ENSG00000168661.15	ENST00000439785.5	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	10.4013220313574	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTGAACTTCAAATAAT	-14	True	NA	8	True	AATAAA	-22	NA	34926902	34945170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34927283_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_6935.known	chr1	+	6759	7	FSM	ENSG00000153936.18	ENST00000370550.10	6759	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_6	22.1108319357027	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATGACTGTACTTT	-70	True	NA	12	True	TATAAA	-3	NA	86914634	87109982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837_87097936_87103431_87103590_87104469
transcript_69351.known	chr19	+	2647	19	FSM	ENSG00000089351.15	ENST00000680623.1	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_10	180.87411214556	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	18	True	NA	13	True	AATAAA	-13	NA	35000322	35026469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_69356.known	chr19	+	808	6	FSM	ENSG00000089351.15	ENST00000424536.2	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	901	junction_5	54.1649333055991	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCCCTCCCTTCGTAA	9	False	NA	28	True	AGTAAA	-25	NA	35000455	35010639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_69357.known	chr19	+	582	6	FSM	ENSG00000089351.15	ENST00000598073.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	389.837709822947	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCCAACGCCATCCAGA	-2	True	NA	NA	False	NA	NA	NA	35001139	35010339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35001245_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_69361.known	chr19	-	565	3	FSM	ENSG00000269303.1	ENST00000600959.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCAGGTCCTTTTT	16	True	NA	NA	False	AATAGA	-17	NA	35000170	34998232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34998602_34999396_34999498_35000075
transcript_69363.known	chr19	+	776	2	FSM	ENSG00000089351.15	ENST00000598362.1	776	2	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAACTAGGTGTGGTGG	301	False	NA	NA	False	AAAAAG	-9	NA	35013606	35014879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35013692_35014188
transcript_69364.nic	chr19	-	1212	2	ISM	ENSG00000269303.1	ENST00000600959.1	565	3	-15	-54	-15	54	intron_retention	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGCTCCCCATCCCTC	1	True	NA	NA	False	AATAAA	-21	NA	35000185	34998178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_34998602_34999396
transcript_69365.known	chr19	+	1666	6	FSM	ENSG00000105711.14	ENST00000262631.11	1666	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.92574776766556	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATAGTTTCGATTGTGAG	5	True	NA	16	True	AATAAA	-16	NA	35030469	35040449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35030861_35032527_35032695_35033498_35033740_35039116_35039259_35039634_35039707_35039796
transcript_69366.known	chr19	+	3461	2	FSM	ENSG00000105711.14	ENST00000602150.2	3461	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATAGTTTCGATTGTGAG	5628	False	NA	16	True	AATAAA	-16	NA	35036898	35040449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35039707_35039796
transcript_69370.known	chr19	+	1746	13	FSM	ENSG00000105707.15	ENST00000672452.2	1746	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	16.5445526449712	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	-20	True	NA	21	True	AATAAA	-16	NA	35041720	35066573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35041873_35042452_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_69379.nic	chr19	+	1918	13	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-27	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_1	32.4623713791146	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	1308	False	NA	21	True	AATAAA	-16	NA	35041693	35066573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_35041873_35042307_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_69394.nnic	chr19	+	1688	12	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	32.2830969255962	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	-32	True	NA	21	True	AATAAA	-16	NA	35041708	35066573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_35041873_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_69408.known	chr19	+	1320	7	FSM	ENSG00000089356.19	ENST00000346446.9	1320	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.10554159678513	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGCCGTTTTATCCCTC	149	False	NA	NA	False	AATAAA	-19	NA	35116261	35124323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35116360_35119362_35119417_35121077_35121111_35121221_35121246_35122764_35122955_35123270_35123309_35123440
transcript_6941.known	chr1	+	1585	5	FSM	ENSG00000153936.18	ENST00000370551.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	8.16624148553054	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGAGTTTTCAGTTTT	-57	True	NA	23	True	AATAAA	-33	NA	86914647	87098445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837
transcript_69417.nnic	chr19	-	430	3	NNC	ENSG00000227392.2	novel	3218	5	NA	NA	15218	-7633	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGGAACTGAGGGACC	NA	False	NA	NA	False	ATTAAA	-16	NA	35091057	35066691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35066827_35086955_35087101_35090907
transcript_69419.nnic	chr19	-	739	3	NNC	ENSG00000227392.2	novel	3218	5	NA	NA	15153	-27013	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	3	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCCGGTTCGTGTATTG	NA	False	NA	NA	False	TATAAA	-21	NA	35091122	35086071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35086451_35086955_35087101_35090907
transcript_69426.known	chr19	+	576	8	FSM	ENSG00000266964.6	ENST00000351325.9	576	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	88.5919331104413	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCGCCCCACCCTAGAG	5	True	NA	80	True	NA	NA	NA	35138823	35143109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35138895_35140075_35140141_35140596_35140630_35141131_35141207_35141535_35141573_35142471_35142522_35142719_35142772_35142916
transcript_69427.known	chr19	-	1113	6	FSM	ENSG00000153902.14	ENST00000591633.2	1113	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.48193472919817	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCGTTAAGTGCCAAGT	3	True	NA	NA	False	TATAAA	-40	NA	35134863	35131083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35134510
transcript_69429.known	chr19	+	708	6	FSM	ENSG00000221946.8	ENST00000270310.7	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	14.3666279968544	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGTGTGTTCTCAT	-17	True	NA	24	True	AATAAA	-24	NA	35143254	35154302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35143365_35148693_35148724_35151253_35151329_35151439_35151483_35151632_35151674_35153893
transcript_69431.nic	chr19	+	419	4	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	525	5	525	0	3prime_fragment	FALSE	canonical	3	159	junction_3	16.062378404209	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACTTTGTCGGTCTCGG	546	False	NA	21	True	AATAAA	-18	NA	35141389	35143050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35141573_35142471_35142522_35142719_35142772_35142916
transcript_69434.nic	chr19	+	564	3	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	525	5	525	0	intron_retention	FALSE	canonical	3	183	junction_2	7.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACTTTGTCGGTCTCGG	546	False	NA	21	True	AATAAA	-18	NA	35141389	35143050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35141573_35142471_35142522_35142719
transcript_69439.known	chr19	+	898	9	FSM	ENSG00000089327.15	ENST00000541435.6	898	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	227.305273805955	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCACTGTGGTCTTT	4	True	NA	-5	True	GGGGCT	-34	NA	35154752	35169859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35154870_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_69441.known	chr19	+	892	9	FSM	ENSG00000089327.15	ENST00000423817.7	892	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	242.966432866765	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGATCTCTGATCAT	0	True	NA	15	True	AGTAAA	-15	NA	35154941	35169879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35155033_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_69452.known	chr19	+	1580	8	FSM	ENSG00000089327.15	ENST00000342879.7	1580	8	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_5	41.0499944070194	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGGATCTCTGATCATT	24	True	NA	16	True	AGTAAA	-16	NA	35154772	35169880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_69453.known	chr19	+	862	9	FSM	ENSG00000089327.15	ENST00000590686.5	862	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	245.252643971477	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTCTTTGCCCCA	4	True	NA	1	True	AGTAAA	-1	NA	35154752	35169865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35154810_35155532_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_69454.known	chr19	+	927	9	FSM	ENSG00000089327.15	ENST00000588699.5	927	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	244.9275084081	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGATCTCTGATCAT	38	False	NA	15	True	AGTAAA	-15	NA	35154786	35169879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35154810_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166429_35169565
transcript_6946.known	chr1	+	556	3	FSM	ENSG00000267272.5	ENST00000476432.5	556	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCCTTTGAGGGCAAGC	2085	False	NA	NA	False	NA	NA	NA	87131968	87134131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_87132253_87133613_87133719_87133964
transcript_69466.nnic	chr19	+	993	4	NNC	ENSG00000105699.17	novel	1932	10	NA	NA	0	-1192	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	789.426937017536	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGGTGACACATG	-4	True	NA	2	True	ATTAAA	-9	NA	35249001	35261396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35249132_35250314_35250660_35258944_35259065_35260998
transcript_69470.known	chr19	+	2357	11	FSM	ENSG00000105695.15	ENST00000392213.8	2357	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.14709105535839	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGTCTAGATCCTGATG	-4	True	NA	5	True	AATAAA	-16	NA	35292160	35313807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35292205_35294234_35294291_35295385_35295455_35295612_35295982_35299553_35299851_35300146_35300405_35302447_35302709_35309873_35310162_35310546_35310644_35311917_35312018_35313289
transcript_69474.nnic	chr19	-	604	6	NNC	ENSG00000188508.11	novel	426	6	NA	NA	1209	0	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_5	4.70744091837593	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTATCTGCGTCTCT	1209	False	NA	0	True	AATAAA	-18	NA	35489255	35487323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35487467_35487711_35487760_35488440_35488486_35488661_35488704_35488801_35488841_35488968
transcript_69475.known	chr19	-	485	6	FSM	ENSG00000188508.11	ENST00000479340.1	485	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.46260011349906	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTATCTGCGTCTCT	6352	False	NA	0	True	AATAAA	-18	NA	35495558	35487323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35487467_35487711_35487760_35488440_35488486_35488661_35488704_35488801_35488841_35495390
transcript_6948.known	chr1	+	538	3	FSM	ENSG00000267272.5	ENST00000589455.5	538	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACTGTCTGTGACAG	2	True	NA	NA	False	NA	NA	NA	87132054	87134192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_87132260_87133613_87133719_87133964
transcript_6949.known	chr1	+	4993	5	FSM	ENSG00000143013.13	ENST00000370544.10	4993	5	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	17.4266319178434	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCTGTTATAAGTTCT	-2	True	NA	10	True	AATAAA	-19	NA	87328879	87348923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_87329245_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_69491.known	chr19	-	1924	16	FSM	ENSG00000161249.21	ENST00000339686.8	1924	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	559.41007022279	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-1	True	NA	-10	True	AATAAA	-21	NA	35513649	35497219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_6951.known	chr1	+	1260	5	FSM	ENSG00000143013.13	ENST00000370542.1	1260	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	75.0345753636282	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAATTTGGAAAAAA	206	False	NA	65	True	AAAAAG	-11	NA	87331667	87345408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_87331815_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_69535.known	chr19	-	1293	11	FSM	ENSG00000161249.21	ENST00000424570.6	1293	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	652.905506179876	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATAAACCTTAGCTG	203	False	NA	-30	True	AAAACA	-33	NA	35513481	35503330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_69538.known	chr19	-	1257	10	FSM	ENSG00000161249.21	ENST00000418261.5	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	671.547466676779	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATAAACCTTAGCTG	203	False	NA	-30	True	AAAACA	-33	NA	35513481	35503330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_69543.known	chr19	-	1111	9	FSM	ENSG00000161249.21	ENST00000451297.6	1111	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	691.295161273388	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGACAAGGAGCCACCA	209	False	NA	-119	True	NA	NA	NA	35513475	35503419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_69556.known	chr19	-	600	6	FSM	ENSG00000161249.21	ENST00000408915.6	600	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	396.528637049079	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-1	True	NA	-10	True	AATAAA	-21	NA	35501911	35497219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35501822
transcript_6956.nnic	chr1	+	1274	4	NNC	ENSG00000143013.13	novel	4993	5	NA	NA	3305	170	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	84.4801094275386	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATGGTGTTTGGGTT	2956	False	NA	6	True	AATAAA	-17	NA	87335085	87345578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_87335316_87339535_87339633_87340046_87340203_87344787
transcript_69578.known	chr19	-	577	5	FSM	ENSG00000161249.21	ENST00000474928.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_3	454.367348628838	2565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-28	True	NA	-3	True	AATAAA	-17	NA	35510469	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183
transcript_69579.known	chr19	-	458	6	FSM	ENSG00000161249.21	ENST00000392206.6	458	6	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_3	436.577599058861	3701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-29	True	NA	-5	True	AATAAA	-15	NA	35510470	35503305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_6958.nnic	chr1	+	1217	4	NNC	ENSG00000143013.13	novel	4993	5	NA	NA	3350	170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	84.9509662491644	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATGGTGTTTGGGTT	3001	False	NA	6	True	AATAAA	-17	NA	87335130	87345578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_87335304_87339535_87339633_87340046_87340203_87344787
transcript_69580.known	chr19	-	848	11	FSM	ENSG00000161249.21	ENST00000436012.5	848	11	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	347.703839495626	1678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	2	True	NA	-12	True	AATAAA	-19	NA	35510439	35497221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_69581.known	chr19	-	935	13	FSM	ENSG00000161249.21	ENST00000402589.6	935	13	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	430.608959949615	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	10	True	NA	-10	True	AATAAA	-21	NA	35510431	35497219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_69582.known	chr19	-	877	12	FSM	ENSG00000161249.21	ENST00000467532.5	877	12	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	444.622915727566	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGACTTTCTCAAATTTT	6	True	NA	-13	True	AATAAA	-18	NA	35510435	35497222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_69583.known	chr19	-	970	14	FSM	ENSG00000161249.21	ENST00000462721.5	970	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	474.969236001585	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	2	True	NA	-10	True	AATAAA	-21	NA	35510439	35497219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_69584.known	chr19	-	762	8	FSM	ENSG00000161249.21	ENST00000460327.5	762	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	402.585115857758	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	7667	False	NA	-10	True	AATAAA	-21	NA	35502879	35497219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35497646_35497682_35498597_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829
transcript_69585.known	chr19	-	606	2	FSM	ENSG00000161249.21	ENST00000472365.6	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	3977	False	NA	-10	True	AATAAA	-21	NA	35497933	35497219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35497646
transcript_69586.known	chr19	-	867	12	FSM	ENSG00000161249.21	ENST00000414866.6	867	12	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	337.844895704699	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-29	True	NA	-75	True	NA	NA	NA	35510470	35497284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_69587.known	chr19	-	593	12	FSM	ENSG00000161249.21	ENST00000472252.6	593	12	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	439.575621790753	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTCCTCCCCTTGGCCC	16	True	NA	NA	False	NA	NA	NA	35510425	35497489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_69588.known	chr19	-	827	13	FSM	ENSG00000161249.21	ENST00000467637.5	827	13	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_9	462.943091054997	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTACCTCCTCCCT	-5	True	NA	-127	True	NA	NA	NA	35510446	35497336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_69589.known	chr19	-	414	5	FSM	ENSG00000161249.21	ENST00000488892.5	414	5	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_4	466.4672416151	2693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	3209	False	35510505	-3	True	AATAAA	-17	NA	35510475	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_69590.known	chr19	-	567	4	FSM	ENSG00000161249.21	ENST00000461300.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	878	junction_3	481.121144365487	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183
transcript_69591.known	chr19	-	510	8	FSM	ENSG00000161249.21	ENST00000458071.5	510	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	647.60478625754	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCCACACTCCTGGCC	6	True	NA	-14	True	AATAAA	-6	NA	35510435	35503314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_69592.known	chr19	-	441	5	FSM	ENSG00000161249.21	ENST00000480507.1	441	5	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_4	461.701472815498	3018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_69593.known	chr19	-	306	4	FSM	ENSG00000161249.21	ENST00000474992.5	306	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	445.222291545346	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	18	True	NA	-3	True	AATAAA	-17	NA	35510423	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35510183_35510253_35510378
transcript_69594.known	chr19	-	370	5	FSM	ENSG00000161249.21	ENST00000470746.6	370	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	438.186818035413	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	5	True	NA	-3	True	AATAAA	-17	NA	35510436	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35509910_35509962_35510183_35510253_35510378
transcript_69595.known	chr19	-	449	3	FSM	ENSG00000161249.21	ENST00000476051.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	520.5	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	1	True	NA	-3	True	AATAAA	-17	NA	35510440	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35510183
transcript_69596.known	chr19	-	582	8	FSM	ENSG00000161249.21	ENST00000462538.5	582	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	671.590375640584	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-5	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_69597.known	chr19	-	1611	13	FSM	ENSG00000161249.21	ENST00000447113.6	1611	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	616.418012931701	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	26	False	NA	-3	True	AATAAA	-17	NA	35513658	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_69598.known	chr19	-	642	11	FSM	ENSG00000161249.21	ENST00000463292.5	642	11	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_8	325.355574717877	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTGTCAGAGTGAGCC	-3	True	NA	NA	False	NA	NA	NA	35510508	35498716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_69599.known	chr19	-	630	12	FSM	ENSG00000161249.21	ENST00000460051.5	630	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	482.855401588276	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGAGTGAGCCG	6	True	NA	NA	False	NA	NA	NA	35510435	35498715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510378
transcript_69600.known	chr19	-	351	4	FSM	ENSG00000161249.21	ENST00000595571.5	351	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	809.338962089158	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	26	True	NA	-3	True	AATAAA	-17	NA	35510231	35503303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35506050_35510183
transcript_69601.nnic	chr19	-	465	4	NNC	ENSG00000189001.11	novel	593	4	NA	NA	2645	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.88561808316413	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCATTGTGGTCCC	2733	False	NA	NA	False	AATAAA	-13	NA	35525576	35523366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35523534_35524710_35524756_35524858_35524925_35525389
transcript_69602.nic	chr19	-	709	3	ISM	ENSG00000189001.11	ENST00000588674.5	593	4	2866	0	2866	0	3prime_fragment	FALSE	canonical	1	1	junction_2	2	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCATTGTGGTCCC	2954	False	NA	NA	False	AATAAA	-13	NA	35525355	35523366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_35523534_35524710_35524756_35524858
transcript_6961.known	chr1	-	3363	5	FSM	ENSG00000237505.8	ENST00000657030.1	3363	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAAAATCTTCGGTTTCT	NA	False	NA	NA	False	NA	NA	NA	88684916	88537753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88540660_88556903_88557049_88569986_88570196_88570809_88570860_88684863
transcript_69614.known	chr19	-	2640	4	FSM	ENSG00000236144.9	ENST00000660248.1	2640	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.0479536666827	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-23	True	NA	-134	True	NA	NA	NA	35545515	35540859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35544111
transcript_69615.known	chr19	-	1421	4	FSM	ENSG00000236144.9	ENST00000444728.3	1547	4	4	122	4	0	multi-exon	FALSE	canonical	3	13	junction_3	38.2186690854963	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-11	True	NA	-134	True	NA	NA	NA	35545503	35540859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35545318
transcript_69621.known	chr19	+	1448	11	FSM	ENSG00000105679.9	ENST00000222286.9	1448	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.916515138991168	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTCCCGTATCTCTGC	1	True	NA	NA	False	AATAAA	-15	NA	35533455	35545319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35533595_35536812_35536991_35538306_35538404_35538576_35538684_35542318_35542410_35542489_35542609_35542944_35543027_35543339_35543492_35543664_35543828_35544908_35545007_35545097
transcript_69622.known	chr19	-	3767	3	FSM	ENSG00000236144.9	ENST00000590717.2	3767	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	15.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	-15	True	NA	-13	True	ATTAAA	-23	NA	35545507	35540738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35541585_35541750_35542075_35542910
transcript_69623.known	chr19	+	868	7	FSM	ENSG00000105677.12	ENST00000222284.10	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_5	86.4272333623301	2461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	7	True	NA	29	True	AGTAAA	-17	NA	35545625	35547526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_69624.known	chr19	+	986	6	FSM	ENSG00000105677.12	ENST00000477168.6	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_4	94.351258603158	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGCTGCCTCCATTT	21	True	NA	25	True	AGTAAA	-13	NA	35545639	35547522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547030_35547118_35547241_35547323
transcript_69625.known	chr19	+	935	6	FSM	ENSG00000105677.12	ENST00000392204.6	935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1924	junction_4	90.4645787034903	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	11	True	NA	29	True	AGTAAA	-17	NA	35545629	35547526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_69626.known	chr19	+	1045	5	FSM	ENSG00000105677.12	ENST00000599895.1	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	2013	junction_1	68.9583207452154	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	55	False	NA	29	True	AGTAAA	-17	NA	35545673	35547526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547241_35547323
transcript_69627.known	chr19	+	1783	2	FSM	ENSG00000105677.12	ENST00000595467.1	1783	2	0	0	0	0	multi-exon	FALSE	canonical	3	2195	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGCTGCCTCCATTTC	39	True	NA	26	True	AGTAAA	-14	NA	35545657	35547523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35547241_35547323
transcript_69631.nnic	chr19	+	379	3	NNC	ENSG00000283907.1	novel	494	3	NA	NA	-40	-2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	2	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTTCAAAATTTATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	35557915	35581952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35558028_35575613_35575780_35581851
transcript_69632.nnic	chr19	+	441	3	NNC	ENSG00000283907.1	novel	494	3	NA	NA	-40	60	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	2	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGATGGACGTATAGCTC	NA	False	NA	NA	False	AATAAA	-19	NA	35557915	35582014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35558028_35575613_35575780_35581851
transcript_69633.known	chr19	+	494	3	FSM	ENSG00000283907.1	ENST00000638356.1	494	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAAAATTTATTCCTG	-4	True	NA	NA	False	AATAAA	-22	NA	35557955	35581954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35558028_35575613_35575933_35581851
transcript_69635.known	chr19	+	4324	19	FSM	ENSG00000249115.9	ENST00000203166.10	4324	19	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_15	33.3740954471216	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTTCCCTAGTTAAG	-29	True	NA	NA	False	AATAAA	-27	NA	35612734	35625355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35619759_35620011_35620124_35620194_35620328_35622600_35622734_35622875
transcript_69637.known	chr19	+	2762	18	FSM	ENSG00000249115.9	ENST00000585968.5	2762	18	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_9	30.8984271892303	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTGTAGGTTGGGGGT	-12	True	NA	-44	True	NA	NA	NA	35612751	35623557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35620124_35620194_35620328_35622600_35622734_35622875
transcript_69642.nic	chr19	+	950	3	ISM	ENSG00000249115.9	ENST00000585968.5	2762	18	-18	8962	-1	454	intron_retention	FALSE	canonical	3	235	junction_1	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAAGAGCATTAAT	-30	True	NA	NA	False	AATAGA	-28	NA	35612733	35614595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35612893_35613729_35613793_35613867
transcript_69643.known	chr19	+	553	2	FSM	ENSG00000249115.9	ENST00000588570.5	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCTGGGGACAATGGG	-12	True	NA	NA	False	NA	NA	NA	35612751	35614141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35612893_35613729
transcript_69644.known	chr19	+	1692	10	FSM	ENSG00000126254.12	ENST00000262633.9	1692	10	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_5	167.971190945514	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	-14	True	NA	21	True	AATAAA	-17	NA	35629035	35637685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_69648.known	chr19	+	1609	9	FSM	ENSG00000126254.12	ENST00000588161.5	1609	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	277.748734245541	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGGCATGGAAGC	-20	True	NA	22	True	AATAAA	-18	NA	35629029	35637686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633100_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_69650.known	chr19	+	771	5	FSM	ENSG00000126254.12	ENST00000586618.5	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	336.634352822168	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGGCTGGGCATGGAA	18	True	NA	20	True	AATAAA	-16	NA	35629067	35637684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631197_35637249_35637353_35637441
transcript_69653.nic	chr19	+	661	3	ISM	ENSG00000105672.15	ENST00000403402.1	1335	6	1271	-19	-240	0	3prime_fragment	FALSE	canonical	3	8	junction_2	1	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCGCGTGCTCCTCTGCA	1685	False	NA	8	True	AATAAA	-19	NA	35643425	35644871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35643754_35644234_35644348_35644651
transcript_69654.known	chr19	+	536	2	FSM	ENSG00000105672.15	ENST00000591135.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGGGCATGAATTACGAG	22	False	NA	NA	False	NA	NA	NA	35643665	35644682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35643754_35644234
transcript_6966.known	chr1	-	762	4	FSM	ENSG00000237505.8	ENST00000425750.2	762	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCCACTTCCTAGAATT	NA	False	NA	NA	False	ATTAAA	-24	NA	88570860	88540302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88540660_88556903_88557049_88569986_88570196_88570809
transcript_69668.known	chr19	+	488	4	FSM	ENSG00000126267.11	ENST00000649813.2	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	4670	junction_1	503.799783864803	62192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCGTGTGAACGGGC	-2	True	NA	23	True	AATAAA	-19	NA	35648322	35658782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35648404_35651232_35651350_35654570_35654672_35658593
transcript_69669.known	chr19	+	290	2	FSM	ENSG00000126267.11	ENST00000590618.1	290	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTATGCGTGTGAAC	2920	False	NA	19	True	AATAAA	-15	NA	35651244	35658778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35651350_35658593
transcript_69670.known	chr19	+	661	4	FSM	ENSG00000126267.11	ENST00000592141.6	661	4	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_1	2597.6502630048	3255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCGTGTGAACGGGC	315	False	NA	23	True	AATAAA	-19	NA	35648639	35658782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35648894_35651232_35651350_35654570_35654672_35658593
transcript_69678.nnic	chr19	+	829	4	NIC	ENSG00000105668.7	novel	1268	8	NA	NA	6366	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	5.65685424949238	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	6381	False	NA	NA	False	AATAAA	-22	NA	35673178	35678483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_35673307_35673437_35673546_35677811_35677896_35677974
transcript_69683.nic	chr19	+	1001	4	ISM	ENSG00000105668.7	ENST00000222275.2	1223	7	6505	-18	6505	0	3prime_fragment	FALSE	canonical	3	12	junction_1	0.471404520791032	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	91	False	NA	NA	False	AATAAA	-22	NA	35673317	35678483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35673546_35675839_35676020_35677811_35677896_35677974
transcript_69684.nnic	chr19	+	947	4	NNC	ENSG00000105668.7	novel	1223	7	NA	NA	6505	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.65685424949238	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGAGTTTTTTTTTTTC	91	False	NA	NA	False	AATAAA	-20	NA	35673317	35678481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35673546_35675839_35676020_35677811_35677896_35678026
transcript_69688.nnic	chr19	+	799	3	NIC	ENSG00000105668.7	novel	1268	8	NA	NA	6527	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	6	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	113	False	NA	NA	False	AATAAA	-22	NA	35673339	35678483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_35673546_35677811_35677896_35677974
transcript_69689.nnic	chr19	+	745	3	NNC	ENSG00000105668.7	novel	1223	7	NA	NA	6527	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGAGTTTTTTTTTTTC	113	False	NA	NA	False	AATAAA	-20	NA	35673339	35678481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35673546_35677811_35677896_35678026
transcript_6969.known	chr1	+	6070	22	FSM	ENSG00000065243.20	ENST00000370521.8	6070	22	0	0	0	0	multi-exon	FALSE	canonical	2	103	junction_12	19.0313025353095	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAGTAATCTTACTTA	1	True	NA	NA	False	AATAAA	-15	NA	88684272	88836255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88805890_88806018_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940_88822004_88824309_88824387_88828480_88828624_88832743_88832852_88833076_88833158_88833244
transcript_69690.nnic	chr19	-	1169	3	NNC	ENSG00000226510.2	novel	808	2	NA	NA	-238	0	intron_retention	FALSE	canonical	2	6	junction_1	0.5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	NA	False	NA	-13	True	AATAAA	-14	NA	35673542	35667947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35668686_35671832_35671956_35673234
transcript_69691.nnic	chr19	-	928	3	NNC	ENSG00000226510.2	novel	808	2	NA	NA	-241	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	NA	False	NA	-13	True	AATAAA	-14	NA	35673545	35667947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35668686_35671832_35671956_35673478
transcript_69692.known	chr19	-	795	2	FSM	ENSG00000226510.2	ENST00000443196.2	808	2	13	0	13	0	multi-exon	FALSE	canonical	3	10	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	10	False	NA	-13	True	AATAAA	-14	NA	35673291	35667947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35668686_35673234
transcript_69693.nnic	chr19	-	805	2	NNC	ENSG00000226510.2	novel	808	2	NA	NA	-241	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	NA	False	NA	-13	True	AATAAA	-14	NA	35673545	35667947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35668686_35673478
transcript_6973.known	chr1	+	2632	11	FSM	ENSG00000065243.20	ENST00000316005.11	2632	11	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_5	13.6165340670818	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCTCCTATCTCAG	NA	False	NA	NA	False	NA	NA	NA	88684221	88806268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496
transcript_69739.nic	chr19	-	797	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	3	47	junction_6	34.2863756549968	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	-7	True	NA	-9	True	AATAAA	-22	NA	35745424	35742530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
transcript_6974.nic	chr1	+	2114	3	ISM	ENSG00000065243.20	ENST00000316005.11	2632	11	0	44641	0	-43267	5prime_fragment	FALSE	canonical	3	158	junction_1	9	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGACATTAGGGAAG	NA	False	NA	NA	False	AATATA	-34	NA	88684221	88761627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_88684629_88740987_88741289_88760221
transcript_69741.nic	chr19	-	856	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_5	30.7503387515216	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	10009	False	NA	-9	True	AATAAA	-22	NA	35745458	35742530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745213_35745347
transcript_69743.known	chr19	-	561	6	FSM	ENSG00000161265.15	ENST00000591057.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	50.0159974408189	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTCCTGGCCACAACT	-1	True	NA	58	True	NA	NA	NA	35745418	35742463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742620_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745188_35745347
transcript_69748.known	chr19	-	765	6	FSM	ENSG00000161265.15	ENST00000378975.8	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	36.5918023606381	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-1	True	NA	-5	True	AATAAA	-26	NA	35745418	35742526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35745124_35745213_35745347
transcript_69755.known	chr19	-	729	6	FSM	ENSG00000161265.15	ENST00000292879.9	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	35.1761282690406	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	9864	False	NA	-10	True	AATAAA	-21	NA	35745445	35742531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
transcript_69762.known	chr19	-	975	6	FSM	ENSG00000161265.15	ENST00000592913.5	975	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	36.2138095206787	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	-9	True	NA	-10	True	AATAAA	-21	NA	35745426	35742531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744069_35744422_35744625_35744739_35745124_35745188_35745347
transcript_69778.known	chr19	-	329	3	FSM	ENSG00000126246.10	ENST00000591748.1	329	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	51	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTATGGCCCATGGC	30	True	NA	NA	False	NA	NA	NA	35740549	35739527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35739627_35739709_35739770_35740379
transcript_6978.nic	chr1	-	1557	7	NIC	ENSG00000137947.12	novel	1599	7	NA	NA	-4	292	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	50.0932463844512	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGTTATATGTTACAT	583	False	NA	0	True	AATAAA	-19	NA	88891948	88852931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891606
transcript_69781.nic	chr19	-	998	3	ISM	ENSG00000126246.10	ENST00000592537.5	1195	5	1824	-2	-27	2	3prime_fragment	FALSE	canonical	3	64	junction_2	31	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCAGTATACAATTAGC	4794	False	NA	-18	True	AATAAA	-18	NA	35740623	35739251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_69782.known	chr19	-	593	3	FSM	ENSG00000126246.10	ENST00000592693.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGGTGGGGGTATGG	4313	False	NA	NA	False	NA	NA	NA	35741104	35739535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35739627_35739709_35740089_35740981
transcript_69784.known	chr19	-	782	2	FSM	ENSG00000126246.10	ENST00000592889.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCTATTCCAACATACA	4082	False	NA	77	True	NA	NA	NA	35741335	35739156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35739627_35741023
transcript_69785.nnic	chr19	-	621	2	NIC	ENSG00000126246.10	novel	329	3	NA	NA	-27	4	combination_of_known_splicesites	FALSE	canonical	3	68	junction_1	0	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGTATACAATTAGCAC	4794	False	NA	-16	True	AATAAA	-20	NA	35740623	35739249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_35739627_35740379
transcript_69787.known	chr19	-	482	2	FSM	ENSG00000126246.10	ENST00000587101.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGGAGTCCCCAACACC	-17	True	NA	NA	False	NA	NA	NA	35740596	35739823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35740089_35740379
transcript_69788.known	chr19	-	1244	6	FSM	ENSG00000161265.15	ENST00000585554.5	1244	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	48.9432324228795	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTGCTGTGGTT	20	True	NA	-7	True	AATAAA	-24	NA	35745397	35742528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744982_35745124_35745213_35745347
transcript_69789.known	chr19	-	723	7	FSM	ENSG00000161265.15	ENST00000591084.5	723	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	49.2126903236237	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-15	True	NA	-5	True	AATAAA	-26	NA	35744699	35742526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743154_35743206_35743295_35743346_35743808_35743905_35744069_35744146_35744322_35744422_35744625
transcript_69790.known	chr19	-	702	6	FSM	ENSG00000161265.15	ENST00000594792.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	43.3331282046427	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	9992	False	NA	-9	True	AATAAA	-22	NA	35745157	35742530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35744625_35744693_35745124
transcript_69791.known	chr19	-	1763	3	FSM	ENSG00000161265.15	ENST00000590135.5	1763	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	20.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTGCTGTGGTT	24	True	NA	-7	True	AATAAA	-24	NA	35744660	35742528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35743905_35744069_35744422_35744625
transcript_69793.known	chr19	+	935	9	FSM	ENSG00000267796.8	ENST00000301159.14	935	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	8.06225774829855	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	9	True	NA	8	True	AGTAAA	-18	NA	35748575	35754519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35748759_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_69811.known	chr19	+	603	4	FSM	ENSG00000205155.8	ENST00000222266.2	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	544.456303725714	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTGGGATCTT	-18	True	NA	24	True	AATAAA	-17	NA	35745618	35747004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35745701_35745872_35745992_35746418_35746524_35746707
transcript_69815.known	chr19	+	833	3	FSM	ENSG00000205155.8	ENST00000591949.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_1	177	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTTCGATACTGACTT	4	True	NA	13	True	AATAAA	-6	NA	35745599	35746993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35745701_35745834_35745992_35746418
transcript_69816.known	chr19	+	1124	4	FSM	ENSG00000205155.8	ENST00000587708.7	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_1	145.568616886409	3597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGACCATCCATC	14	True	NA	24	True	AATAAA	-26	NA	35745650	35747519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707
transcript_69817.known	chr19	+	1037	11	FSM	ENSG00000188223.9	ENST00000591613.2	1037	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	449.043260722171	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	9	False	NA	8	True	AGTAAA	-18	NA	35745677	35754519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_6982.known	chr1	-	1599	7	FSM	ENSG00000137947.12	ENST00000370500.10	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	20.5993527406405	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTGAGCTTATTG	-2	True	NA	1	True	ATTAAA	-18	NA	88891567	88852632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
transcript_69825.known	chr19	+	772	5	FSM	ENSG00000167595.15	ENST00000537459.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	9.01041064547005	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAACCA	14	True	NA	NA	False	ACTAAA	-15	NA	35758193	35762563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762252
transcript_69826.known	chr19	+	1266	5	FSM	ENSG00000167595.15	ENST00000536950.5	1266	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_4	12.9807549857472	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGCTGATCCCCATT	-1	True	NA	NA	False	AAAAAG	-1	NA	35758178	35763045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762255
transcript_69832.known	chr19	+	650	3	FSM	ENSG00000167595.15	ENST00000421853.6	650	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCTGGGCACCGTG	18	True	NA	NA	False	TTTAAA	-13	NA	35758197	35762745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35758227_35762018_35762147_35762252
transcript_69843.known	chr19	+	2980	15	FSM	ENSG00000126259.20	ENST00000360202.10	2980	15	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_8	7.2702917999997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	-6	True	NA	11	True	AATAAA	-19	NA	35856910	35867136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35857181_35857344_35857495_35858407_35858558_35858703_35858865_35859480_35859632_35860296_35860403_35860518_35860668_35860908_35861037_35861121_35861255_35861540_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
transcript_69849.nic	chr19	+	1797	6	ISM	ENSG00000126259.20	ENST00000360202.10	2980	15	4415	0	4220	0	3prime_fragment	FALSE	canonical	3	36	junction_4	5.32916503778969	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	4318	False	NA	11	True	AATAAA	-19	NA	35861325	35867136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
transcript_69851.nic	chr19	+	1692	5	ISM	ENSG00000126259.20	ENST00000592409.5	2563	14	4739	-636	4220	0	3prime_fragment	FALSE	canonical	2	4	junction_2	17.4839211849059	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	4318	False	NA	11	True	AATAAA	-19	NA	35861325	35867136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35861642_35861804_35862025_35862926_35863037_35864647_35864714_35866156
transcript_69852.known	chr19	+	1179	8	FSM	ENSG00000105290.13	ENST00000587274.1	1179	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	48.7500915750056	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCCCTACTAACATCCCA	2518	False	NA	-25	True	NA	NA	NA	35874507	35879751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_69855.nnic	chr19	+	649	5	NNC	ENSG00000126264.10	novel	564	4	NA	NA	-3271	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.83282518435822	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCGTATTCTTTCTCA	NA	False	NA	11	True	AATAAA	-15	NA	35899257	35904271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35899453_35902532_35902637_35903350_35903417_35903771_35903904_35904119
transcript_69859.nnic	chr19	+	476	4	NNC	ENSG00000126264.10	novel	564	4	NA	NA	-3202	1	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	6.12825877028341	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCGTATTCTTTCTCA	NA	False	NA	11	True	AATAAA	-15	NA	35899326	35904271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35899453_35903350_35903417_35903771_35903904_35904119
transcript_69861.known	chr19	+	445	4	FSM	ENSG00000126264.10	ENST00000437550.2	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3.29983164553722	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTCGTATTCTTTCTC	9	False	NA	10	True	AATAAA	-14	NA	35902537	35904270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35902637_35903350_35903417_35903771_35903904_35904122
transcript_69866.nnic	chr19	-	1243	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_6	60.3759057903068	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	9052	False	NA	-35	True	AATAAA	-15	NA	36008833	36003309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008553
transcript_6987.known	chr1	-	1868	13	FSM	ENSG00000137944.18	ENST00000370491.7	1868	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_12	29.9085411435151	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-20	True	NA	-1	True	AATAAA	-23	NA	88992776	88935772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88992584
transcript_69880.nnic	chr19	-	896	5	NIC	ENSG00000181392.17	novel	1004	6	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	78.3976243262511	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	9060	False	NA	-35	True	AATAAA	-15	NA	36008825	36003309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008553
transcript_69889.nic	chr19	-	650	4	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	82.4998316496599	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	9057	False	NA	-35	True	AATAAA	-15	NA	36008828	36003309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008553
transcript_69895.known	chr19	-	382	3	FSM	ENSG00000181392.17	ENST00000397428.8	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	9266	False	NA	-35	True	AATAAA	-15	NA	36008619	36003309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36005332_36005438_36008553
transcript_69899.known	chr19	-	1377	8	FSM	ENSG00000181392.17	ENST00000324444.9	1377	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_6	44.490310800241	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36	True	NA	-32	True	AATAAA	-18	NA	36008813	36003306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_69900.known	chr19	-	1004	6	FSM	ENSG00000181392.17	ENST00000340477.9	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	68.7092424641693	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-5	True	NA	-35	True	AATAAA	-15	NA	36008782	36003309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008216_36008368_36008553
transcript_69901.known	chr19	-	1175	8	FSM	ENSG00000181392.17	ENST00000490730.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	60.1175718819348	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-16	True	NA	-35	True	AATAAA	-15	NA	36008793	36003309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006601_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_69902.known	chr19	-	2341	7	FSM	ENSG00000181392.17	ENST00000465425.2	2341	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	48.0127297934852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTGAAGATACTAGGTG	-16	True	NA	-33	True	AATAAA	-17	NA	36008793	36003307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_69903.known	chr19	-	670	3	FSM	ENSG00000239382.11	ENST00000470859.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	58	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACTGATCTTGAGTCC	-5	True	NA	NA	False	NA	NA	NA	36014218	36012542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36013090_36013343_36013423_36014174
transcript_69904.known	chr19	+	4727	32	FSM	ENSG00000075702.19	ENST00000401500.7	4727	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	57.6194411635517	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTTCCTGGTGTCTGTTTG	-6	True	NA	18	True	AATAAA	-18	NA	36054896	36105108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36081432_36081571_36083062_36083242_36084652_36084745_36086686_36086813_36089037_36089106_36089184_36089307_36090444_36090521_36091199_36091312_36091401_36091466_36092688_36092812_36094030_36094165_36097026_36097080_36099398_36099618_36100747_36100876_36101213_36101318_36101663_36101775_36102013_36102152_36102736_36102852_36102947_36103075_36103155_36103208_36103342_36103982_36104517_36104676_36104767
transcript_69905.known	chr19	-	3350	14	FSM	ENSG00000105270.15	ENST00000360535.9	3350	14	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_13	12.5382255758826	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCGGGTCATTGG	-23	True	NA	-4	True	AATAAA	-16	NA	36032873	36014659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
transcript_69913.known	chr19	+	643	4	FSM	ENSG00000267698.2	ENST00000586962.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.68178700572909	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAGGGAGAAATAAGA	-12	True	NA	NA	False	NA	NA	NA	36014507	36045972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36014587_36016811_36016961_36019233_36019385_36045708
transcript_69915.nnic	chr19	+	714	4	NNC	ENSG00000267698.2	novel	643	4	NA	NA	-30	5142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.58653778449403	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTGTGTGTTTGGG	NA	False	NA	NA	False	AATAAA	-15	NA	36014462	36051114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36014587_36016811_36016961_36019233_36019385_36050824
transcript_69917.known	chr19	-	1349	4	FSM	ENSG00000161277.11	ENST00000292894.2	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	13.9124245031395	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-22	True	NA	-3	True	AATAAA	-21	NA	36054285	36034983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36035593_36039322_36039719_36039943_36040137_36054134
transcript_69918.nic	chr19	-	1353	4	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	48.3758433747901	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	250	False	NA	-3	True	AATAAA	-21	NA	36054503	36034983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36035593_36039322_36039719_36039943_36040137_36054348
transcript_69919.nic	chr19	+	568	3	FSM	ENSG00000267698.2	ENST00000685157.1	538	3	-30	0	-30	0	multi-exon	FALSE	canonical	3	13	junction_2	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCCTGTCTCATATA	NA	False	NA	NA	False	NA	NA	NA	36014462	36019528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36014587_36016811_36016961_36019233
transcript_69922.known	chr19	-	1084	3	FSM	ENSG00000161277.11	ENST00000522483.2	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	64.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACCTGGTTCTAAGGA	376	False	NA	NA	False	NA	NA	NA	36054377	36035147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36035593_36039322_36039719_36054134
transcript_69927.known	chr19	+	1067	7	FSM	ENSG00000105254.12	ENST00000651435.1	1067	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	808.144926496617	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	3	True	NA	19	True	ATTAAA	-20	NA	36115505	36125945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36124249_36124364_36125450_36125524_36125667
transcript_69931.known	chr19	+	724	6	FSM	ENSG00000105254.12	ENST00000589996.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	635.63983512678	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACCTAAGGAATTCCC	16	True	NA	-74	True	NA	NA	NA	36115518	36125778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121670_36125450_36125524_36125667
transcript_69932.known	chr19	+	987	6	FSM	ENSG00000105254.12	ENST00000221855.8	987	6	0	0	0	0	multi-exon	FALSE	canonical	3	1684	junction_2	60.8604962188118	3229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATTTAGAGGACTTC	-35	True	NA	15	True	ATTAAA	-16	NA	36115467	36125941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_69937.known	chr19	+	875	6	FSM	ENSG00000105254.12	ENST00000585746.1	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	695.369944705694	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	62	False	NA	19	True	ATTAAA	-20	NA	36115837	36125945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36115929_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_6994.known	chr1	-	4799	2	FSM	ENSG00000213516.10	ENST00000321792.5	4799	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCGTAAATACTTTTC	-16	True	NA	-11	True	ATTAAA	-16	NA	88992772	88979455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88984067_88992584
transcript_69943.known	chr19	-	744	6	FSM	ENSG00000105258.9	ENST00000586439.1	744	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	957.861785436709	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCATGCGTGAGTTTT	-12	True	NA	-18	True	AATAAA	-5	NA	36115213	36113723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114819
transcript_69950.known	chr19	-	368	5	FSM	ENSG00000105258.9	ENST00000585842.5	368	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	1035.83046392737	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTTTTCTGTGTTTAT	30	True	NA	-8	True	AATAAA	-15	NA	36114860	36113713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114797
transcript_69952.known	chr19	+	675	4	FSM	ENSG00000105261.8	ENST00000633214.2	683	4	8	0	8	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATGGAATCTGGTGTTTA	8028	False	NA	NA	False	AATAAA	-14	NA	36111150	36113711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36111297_36111368_36111434_36112759_36112965_36113452
transcript_69956.known	chr19	-	443	6	FSM	ENSG00000105258.9	ENST00000221859.9	443	6	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	80.3183665172543	10714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	15	True	NA	-3	True	AATAAA	-20	NA	36114875	36113708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114797
transcript_69957.known	chr19	-	993	5	FSM	ENSG00000105258.9	ENST00000586789.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	89.2076229926569	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	8	True	NA	-17	True	AATAAA	-6	NA	36115193	36113722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114714_36114797
transcript_69958.known	chr19	-	542	5	FSM	ENSG00000105258.9	ENST00000589591.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	3	2255	junction_1	89.6447851244009	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTGTGTTTATTTGC	-1	True	NA	-4	True	AATAAA	-19	NA	36114891	36113709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658
transcript_69959.known	chr19	-	493	6	FSM	ENSG00000105258.9	ENST00000592962.5	493	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	945.311250329753	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGAGTTTTCTGTGTTT	-16	True	NA	-10	True	AATAAA	-13	NA	36114906	36113715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114150_36114252_36114338_36114413_36114658_36114714_36114797
transcript_69966.nic	chr19	+	1369	10	NIC	ENSG00000126247.11	novel	690	8	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	274.904338019116	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	-3	True	NA	27	True	AATAAA	-24	NA	36141307	36150353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36141565_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_69967.nic	chr19	+	1209	10	NIC	ENSG00000126247.11	novel	570	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	270.892261395468	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	-21	True	NA	27	True	AATAAA	-24	NA	36141586	36150353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36141684_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_69990.known	chr19	+	1428	11	FSM	ENSG00000126247.11	ENST00000246533.8	1428	11	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	201.468707247552	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	-35	True	NA	27	True	AATAAA	-24	NA	36140065	36150353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36140158_36140996_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_69991.known	chr19	+	403	4	FSM	ENSG00000126247.11	ENST00000590211.5	403	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	339.314013857371	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGGGATCTGCCTCCTG	17	True	NA	23	True	AATAAA	-20	NA	36141189	36150349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36141221_36142299_36142334_36142651_36142682_36150041
transcript_69992.nnic	chr19	-	862	5	NNC	ENSG00000161281.11	novel	407	4	NA	NA	-8371	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	88.8210982818835	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGTGTTTGTGTC	NA	False	NA	-4	True	AATAAA	-13	NA	36160820	36150921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36151035_36151461_36151547_36151668_36151756_36158606_36158795_36160431
transcript_69993.known	chr19	-	340	4	FSM	ENSG00000161281.11	ENST00000292907.8	340	4	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	1.24721912892465	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGTGTTTGTGTC	19	True	NA	-4	True	AATAAA	-13	NA	36152447	36150921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36151035_36151461_36151547_36151668_36151756_36152392
transcript_69995.known	chr19	-	1799	5	FSM	ENSG00000196357.12	ENST00000304116.10	1799	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.6583123951777	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGCATCAGATAATCT	5	True	NA	0	True	AATAAA	-32	NA	36214665	36182275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214621
transcript_69998.known	chr19	-	1931	5	FSM	ENSG00000196357.12	ENST00000392173.6	1931	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.74165738677394	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCACTCACTGTTTC	4782	False	NA	-18	True	AATAAA	-14	NA	36215081	36182293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214887
transcript_7.known	ERCC-00019	+	627	1	FSM	ERCC-00019A	DQ883651	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00019_+_0_600
transcript_70.known	ERCC-00163	+	527	1	FSM	ERCC-00163A	DQ668359	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00163_+_0_500
transcript_700.known	chr1	-	878	2	FSM	ENSG00000188976.11	ENST00000469563.1	878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1476	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAAAATTAGCCTGGC	3	True	NA	NA	False	AAAAAG	-20	NA	959256	958245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_959082_959214
transcript_7000.known	chr1	-	1815	14	FSM	ENSG00000137944.18	ENST00000260508.9	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_12	60.1428280288981	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTTCATGTTTCCACC	-2	True	NA	-7	True	AATAAA	-17	NA	88992629	88935778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584
transcript_70003.known	chr19	+	3347	4	FSM	ENSG00000167635.12	ENST00000443387.3	3347	4	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	357.592256938293	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	-2	True	NA	16	True	ATTAAA	-20	NA	36215105	36238768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36215197_36218121_36218196_36228747_36228820_36235658
transcript_70009.known	chr19	+	533	3	FSM	ENSG00000167635.12	ENST00000591063.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	526.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTCATATGTTGCATTT	367	False	NA	NA	False	NA	NA	NA	36215095	36236059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36215156_36228747_36228820_36235658
transcript_7001.known	chr1	-	1019	9	FSM	ENSG00000137944.18	ENST00000370486.1	1019	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	95.5232301589514	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCAACTATAACACAGAG	32	False	NA	NA	False	NA	NA	NA	88992953	88961166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584_88992749_88992886
transcript_70011.known	chr19	+	565	3	FSM	ENSG00000167635.12	ENST00000586094.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	447	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATATGTTGCATTTC	-2	True	NA	NA	False	NA	NA	NA	36215105	36236060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36215197_36228747_36228820_36235658
transcript_70019.known	chr19	+	439	3	FSM	ENSG00000267053.8	ENST00000590845.1	439	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAATGTTTTTTTTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	36307197	36312660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36307328_36311622_36311793_36312521
transcript_7002.known	chr1	-	991	3	FSM	ENSG00000213516.10	ENST00000413769.1	991	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	31.5	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCTCCTAAGAGATCTG	-3	True	NA	NA	False	AGTAAA	-28	NA	88992759	88983350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88984067_88988251_88988352_88992584
transcript_70026.known	chr19	+	566	3	FSM	ENSG00000267053.8	ENST00000586488.6	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTGGTGCCCCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	36304563	36312668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36304813_36311622_36311793_36312521
transcript_70027.known	chr19	-	2038	6	FSM	ENSG00000232677.10	ENST00000585356.6	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	330.792019250767	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACAATTGTGCCTTCT	22	True	NA	NA	False	AAGAAA	-20	NA	36331707	36312585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_70028.known	chr19	-	1003	6	FSM	ENSG00000232677.10	ENST00000449434.8	1019	6	0	16	0	-10	multi-exon	FALSE	canonical	3	299	junction_1	279.61187385374	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-24	True	NA	-16	True	ATTAAA	-16	NA	36331753	36313076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_70029.known	chr19	-	1581	7	FSM	ENSG00000232677.10	ENST00000658126.2	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	363.464081979071	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	10	True	NA	-33	True	NA	NA	NA	36331662	36313093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_7003.nnic	chr1	+	1238	3	NNC	ENSG00000284734.1	novel	1602	2	NA	NA	-422	-692	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCATAATTGTATTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	89198291	89206348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_89198409_89198502_89199059_89205783
transcript_70030.known	chr19	-	3581	5	FSM	ENSG00000232677.10	ENST00000666182.3	3595	5	14	0	7	0	multi-exon	FALSE	canonical	3	412	junction_1	275.287463390544	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATAGGGCTCTTGGCT	-15	True	NA	-6	True	ATTAAA	-26	NA	36331687	36313066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_70031.known	chr19	-	1358	7	FSM	ENSG00000232677.10	ENST00000412740.7	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	372.803977386985	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTATCCGTTACCTCA	-5	True	NA	NA	False	TATAAA	-44	NA	36331734	36315004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36315529_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_70032.known	chr19	-	1749	6	FSM	ENSG00000232677.10	ENST00000590622.5	1749	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	403.164780207795	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATAGCTTACAGTCTTT	11	True	NA	-22	True	AATAAA	-10	NA	36331718	36319715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_70033.known	chr19	-	1397	3	FSM	ENSG00000232677.10	ENST00000651681.2	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	412	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-16	True	NA	-3	True	AATAAA	-23	NA	36331745	36324906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36325765_36330252_36330493_36331446
transcript_70034.known	chr19	-	2797	3	FSM	ENSG00000232677.10	ENST00000666458.1	2797	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	503	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-27	True	NA	-20	True	AATAAA	-6	NA	36331756	36324923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36327171_36330252_36330493_36331446
transcript_70035.known	chr19	-	2856	3	FSM	ENSG00000232677.10	ENST00000591372.3	2868	3	2	10	-1	6	multi-exon	FALSE	canonical	3	209	junction_1	441.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-25	True	NA	-14	True	AATAAA	-12	NA	36331754	36324917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36327226_36330252_36330493_36331446
transcript_70036.known	chr19	-	2111	4	FSM	ENSG00000232677.10	ENST00000668768.1	2111	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	455.738472762127	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-5	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36325765_36326481_36327226_36330252_36330493_36331446
transcript_70037.known	chr19	-	2047	2	FSM	ENSG00000232677.10	ENST00000661195.1	2047	2	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTATGTTCAAATCTT	35	True	NA	NA	False	NA	NA	NA	36331694	36328693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36330493_36331446
transcript_70038.known	chr19	-	2540	4	FSM	ENSG00000232677.10	ENST00000658991.1	2540	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	467.813590605869	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-5	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36325765_36326052_36327226_36330252_36330493_36331446
transcript_7004.known	chr1	+	1602	2	FSM	ENSG00000284734.1	ENST00000641099.1	1602	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTATGCCCACTGTTGG	NA	False	NA	NA	False	NA	NA	NA	89198713	89207040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89199059_89205783
transcript_70041.nnic	chr19	-	959	5	NNC	ENSG00000142065.14	novel	7491	5	NA	NA	-18	-2356	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	13.2759180473518	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGACTATGTAGAAATG	NA	False	NA	NA	False	AATAAA	-23	NA	36379219	36336808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36337397_36360434_36360534_36362111_36362239_36367883_36367972_36379162
transcript_70042.nnic	chr19	-	962	5	NNC	ENSG00000142065.14	novel	7491	5	NA	NA	-18	-2356	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_2	15.1554445662277	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGACTATGTAGAAATG	NA	False	NA	NA	False	AATAAA	-23	NA	36379219	36336808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36337397_36360434_36360537_36362111_36362239_36367883_36367972_36379162
transcript_70044.nic	chr19	-	1271	4	ISM	ENSG00000142065.14	ENST00000270001.12	7491	5	-18	25082	-18	577	5prime_fragment	FALSE	canonical	3	22	junction_3	11.8977121983832	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAATACCCTTATGCT	NA	False	NA	NA	False	GATAAA	-5	NA	36379219	36359534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_36360534_36362111_36362239_36367883_36367972_36379162
transcript_70046.nic	chr19	-	709	4	ISM	ENSG00000142065.14	ENST00000270001.12	7491	5	-18	25644	-18	15	5prime_fragment	FALSE	canonical	3	22	junction_3	11.8977121983832	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTTCTTGAAAAGATCA	NA	False	NA	NA	False	AATAAA	-22	NA	36379219	36360096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_36360534_36362111_36362239_36367883_36367972_36379162
transcript_70048.known	chr19	-	7491	5	FSM	ENSG00000142065.14	ENST00000270001.12	7491	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	10.917302780449	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATTTTTTAATTT	-5	True	NA	0	True	AATAAA	-20	NA	36379201	36334452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36341591_36360434_36360534_36362111_36362239_36367883_36367972_36379162
transcript_70049.known	chr19	-	642	3	FSM	ENSG00000142065.14	ENST00000589280.1	642	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	19	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAGCCAAAAATTGAT	14	False	NA	NA	False	AATAAA	-45	NA	36367973	36360111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36360537_36362111_36362239_36367883
transcript_7005.nnic	chr1	+	928	3	NNC	ENSG00000225492.6	novel	1234	5	NA	NA	7799	-3292	intron_retention	FALSE	canonical	1	1	junction_2	0.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATAGTTTCATTTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	89418117	89421642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_89418356_89420190_89420319_89421080
transcript_70050.nnic	chr19	-	1822	5	NNC	ENSG00000181007.9	novel	1360	2	NA	NA	-24	2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	35.5132017706092	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTATCTGTTTTGATAAA	-16	True	NA	-6	True	AATAAA	-16	NA	36418668	36383117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36384456_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_70051.nic	chr19	-	1800	5	NIC	ENSG00000181007.9	novel	1360	2	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.7888665095472	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTATCTGTTTTGATA	-16	True	NA	-8	True	AATAAA	-14	NA	36418668	36383119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36384436_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_70052.nic	chr19	-	1709	5	NIC	ENSG00000181007.9	novel	1360	2	NA	NA	-24	-91	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.7888665095472	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATATATGTGGTTGTCT	-16	True	NA	-6	True	AATAAA	-25	NA	36418668	36383210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36384436_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_70053.known	chr19	-	5941	5	FSM	ENSG00000181007.9	ENST00000392161.4	5941	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	7.14142842854285	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAGCTACATAATGAG	8	True	NA	NA	False	AAAAAG	-1	NA	36418644	36388629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36394111_36405579_36405673_36407886_36408014_36409780_36409868_36418491
transcript_70067.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000452939.7	5250	5	43	0	1	0	multi-exon	FALSE	canonical	2	11	junction_4	9.49670995661129	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	355	False	NA	0	True	AATAAA	-19	NA	36489518	36445118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489485
transcript_70068.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000424129.7	5207	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	9.82344135219425	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	367	False	NA	0	True	AATAAA	-19	NA	36489506	36445118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489473
transcript_70070.known	chr19	-	5197	5	FSM	ENSG00000186017.16	ENST00000434377.6	5197	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	11.202678251204	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	438	False	NA	0	True	AATAAA	-19	NA	36489435	36445118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489412
transcript_70083.known	chr19	-	5285	3	FSM	ENSG00000254004.7	ENST00000523638.6	5285	3	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_2	3	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCAGTTGTTTTTATTT	-16	True	NA	-1	True	AATAAA	-22	NA	36528271	36510686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36515700_36525154_36525374_36528218
transcript_70085.nic	chr19	-	652	3	ISM	ENSG00000254004.7	ENST00000592282.1	5055	4	-73	6806	-70	-6055	5prime_fragment	FALSE	canonical	1	1	junction_1	164.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAGAAAATAATT	338	False	NA	NA	False	AAAAAG	-5	NA	36528341	36517833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_36518144_36525154_36525374_36528218
transcript_70086.nnic	chr19	-	1479	2	NIC	ENSG00000254004.7	novel	5285	3	NA	NA	-29	-2524	combination_of_known_splicesites	FALSE	canonical	3	115	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCGAATCACATCACT	379	False	NA	-14	True	AATAAA	-13	NA	36528300	36514302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36515700_36528218
transcript_70087.known	chr19	-	330	2	FSM	ENSG00000254004.7	ENST00000520608.2	330	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGGGTTTTTTTGTTTG	-10	True	NA	NA	False	GATAAA	-45	NA	36528265	36525090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36525374_36528218
transcript_7009.known	chr1	-	439	2	FSM	ENSG00000231999.8	ENST00000528692.1	439	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGGGCTTTACATTG	3508	False	NA	NA	False	AATGAA	-23	NA	89632761	89631875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_89632210_89632656
transcript_7010.known	chr1	-	790	3	FSM	ENSG00000231999.8	ENST00000415584.7	790	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACCTAGCATTTCTTT	27	True	NA	NA	False	ATTAAA	-18	NA	89632896	89624849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_89625206_89632015_89632210_89632656
transcript_70100.nnic	chr19	+	710	5	NNC	ENSG00000233527.10	novel	1033	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	16.9022927438854	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	-19	True	NA	6	True	ATTAAA	-20	NA	36573345	36594708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36573526_36574820_36574901_36577140_36577238_36593845_36593932_36594441
transcript_70104.known	chr19	+	1033	5	FSM	ENSG00000233527.10	ENST00000475219.6	1033	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	11.5108644332213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	-4	True	NA	6	True	ATTAAA	-20	NA	36573069	36594708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573526_36574820_36574901_36593845_36593932_36594155_36594300_36594441
transcript_70108.nic	chr19	+	826	5	NIC	ENSG00000233527.10	novel	1033	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	9.5524865872714	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	-17	True	NA	6	True	ATTAAA	-20	NA	36573347	36594708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36573556_36574820_36574901_36593845_36593932_36594155_36594300_36594400
transcript_70109.nic	chr19	+	785	5	NIC	ENSG00000233527.10	novel	1033	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	7.88590514779375	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	-17	True	NA	6	True	ATTAAA	-20	NA	36573347	36594708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36573556_36574820_36574901_36593845_36593932_36594155_36594300_36594441
transcript_7011.known	chr1	-	1305	3	FSM	ENSG00000231999.8	ENST00000526694.3	1323	3	7	11	-2	-11	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCCTAAAGAATGTGAC	7	True	NA	NA	False	ATTAAA	-14	NA	89632916	89625975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_89626827_89632015_89632210_89632656
transcript_70111.known	chr19	+	695	5	FSM	ENSG00000233527.10	ENST00000670806.1	695	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.44862367942584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGTTCTAAGCCATG	227	False	NA	-8	True	ATTAAA	-6	NA	36573659	36594694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573792_36574820_36574901_36593845_36593932_36594155_36594300_36594441
transcript_70113.known	chr19	+	8336	5	FSM	ENSG00000161298.19	ENST00000292928.7	8336	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.59016994374947	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGCAGTACCTCCTGA	0	True	NA	18	True	AATAAA	-24	NA	36605312	36634114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36605348_36607551_36607623_36609901_36610054_36610649_36610743_36626129
transcript_70116.nnic	chr19	+	531	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	0	-1472	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_3	8.05536398239638	112	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	-19	True	NA	15	True	AATAAA	-17	NA	36573345	36580340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36573526_36574820_36574901_36577140_36577238_36580166
transcript_70118.nic	chr19	+	503	4	NIC	ENSG00000233527.10	novel	2080	4	NA	NA	40	-1475	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	19.9555060627944	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAATCACTTATTATT	-16	True	NA	12	True	AATAAA	-14	NA	36573416	36580337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36573526_36574820_36574901_36577140_36577284_36580166
transcript_7012.known	chr1	-	695	1	FSM	ENSG00000272931.1	ENST00000609194.1	695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	99	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCATATCTTCTTTT	922	False	NA	-16	True	AATAAA	-18	NA	89820868	89820173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_89820200_89820900
transcript_70121.nic	chr19	+	613	4	FSM	ENSG00000233527.10	ENST00000687100.1	617	4	0	4	0	0	multi-exon	FALSE	canonical	3	13	junction_2	9.41629792788369	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	-19	True	NA	6	True	ATTAAA	-20	NA	36573345	36594708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573526_36574820_36574901_36593845_36593932_36594441
transcript_70125.nnic	chr19	+	559	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	2	-1472	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	10.5303793326209	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	-17	True	NA	15	True	AATAAA	-17	NA	36573347	36580340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36573556_36574820_36574901_36577140_36577238_36580166
transcript_70127.known	chr19	+	2080	4	FSM	ENSG00000233527.10	ENST00000670019.1	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	19.6015872373189	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATAGAACCATAAGCTAA	-20	True	NA	NA	False	NA	NA	NA	36573344	36581812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573556_36574820_36574901_36577140_36577284_36580166
transcript_70130.known	chr19	+	452	4	FSM	ENSG00000233527.10	ENST00000592880.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	5.8878405775519	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	104	False	NA	6	True	ATTAAA	-20	NA	36573536	36594708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573556_36574820_36574901_36593845_36593932_36594441
transcript_70134.nnic	chr19	+	696	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	70	-1472	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.1187120819429	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	14	True	NA	15	True	AATAAA	-17	NA	36573446	36580340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36573792_36574820_36574901_36577140_36577238_36580166
transcript_70139.known	chr19	+	1004	3	FSM	ENSG00000233527.10	ENST00000448373.6	1004	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACATTAATTCAGTA	12	True	NA	6	True	AATAAA	-18	NA	36573376	36577915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573526_36574820_36574901_36577140
transcript_7014.known	chr1	+	3345	3	FSM	ENSG00000171492.14	ENST00000394593.7	3345	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	113	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTTTTTTGAGGGGTCT	709	False	NA	20	True	ATTAAA	-20	NA	89821920	89936001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89822186_89843637_89843783_89933066
transcript_70140.nnic	chr19	+	343	3	NIC	ENSG00000233527.10	novel	1004	3	NA	NA	60	-1472	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	16	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	4	True	NA	15	True	AATAAA	-17	NA	36573436	36580340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36573526_36574820_36574901_36580166
transcript_7015.known	chr1	+	922	2	FSM	ENSG00000171492.14	ENST00000527156.1	922	2	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACATGCTCAAAAGTAG	-26	True	NA	NA	False	NA	NA	NA	89843422	89933628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89843783_89933066
transcript_70156.nic	chr19	-	914	2	ISM	ENSG00000186020.13	ENST00000587286.1	568	4	-37	6545	-4	-6545	5prime_fragment	FALSE	canonical	3	4	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGGTTCTCACAACCCC	714	False	NA	NA	False	NA	NA	NA	36605280	36588942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_36589702_36605125
transcript_70158.known	chr19	-	3955	6	FSM	ENSG00000197808.13	ENST00000588268.6	3955	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5.88557558782486	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTTCTCATTCCTT	-3	True	NA	0	True	NA	NA	NA	36666837	36636617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658298_36658426_36664697_36664787_36666689
transcript_70163.known	chr19	-	3326	6	FSM	ENSG00000197808.13	ENST00000396893.6	3326	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.78567765543682	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTCAAAACACAACCAATA	15	True	NA	NA	False	AAAAAG	-18	NA	36666819	36637191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658335_36658426_36664697_36664787_36666689
transcript_70165.known	chr19	-	2361	5	FSM	ENSG00000197808.13	ENST00000360357.8	2361	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.51920240520265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAATATTTCTAGAAT	-7	True	NA	NA	False	NA	NA	NA	36666841	36638146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36640044_36656447_36656544_36658298_36658426_36664697_36664787_36666689
transcript_70171.nnic	chr19	-	572	3	NNC	ENSG00000225975.8	novel	3702	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTAGACTTTTTAAATG	NA	False	NA	-5	True	AATAAA	-21	NA	36687469	36685721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36685971_36686685_36686807_36687267
transcript_70172.known	chr19	-	3668	3	FSM	ENSG00000225975.8	ENST00000665321.2	3702	3	34	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCGTCTCAAAAAAAAAA	-20	True	NA	NA	False	NA	NA	NA	36687434	36682635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36686016_36686685_36686807_36687267
transcript_70173.known	chr19	-	550	2	FSM	ENSG00000225975.8	ENST00000590952.2	1260	2	0	710	0	-705	multi-exon	FALSE	canonical	3	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTTTATGGTAGATGA	-23	True	NA	NA	False	NA	NA	NA	36687437	36686426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36686807_36687267
transcript_70177.known	chr19	+	2802	6	FSM	ENSG00000189042.14	ENST00000682579.1	2802	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	29.8087235553621	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGTGTGTGTTTGCGT	12	True	NA	17	True	AATAAA	-27	NA	36687611	36721336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36687635_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_70182.known	chr19	+	2825	6	FSM	ENSG00000189042.14	ENST00000536254.6	2825	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	34.3196736581221	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTATATCATGTGTG	28	False	NA	8	True	AATAAA	-18	NA	36687627	36721327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36687687_36689400_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_70185.nnic	chr19	+	3021	6	NNC	ENSG00000189042.14	novel	2802	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.8474545818807	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	27	False	NA	7	True	AATAAA	-17	NA	36687626	36721326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36687879_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_7019.known	chr1	+	9729	12	FSM	ENSG00000162664.17	ENST00000340281.9	9729	12	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	37.9355695623056	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTCCTGTCTGAAAAA	-35	True	NA	9	True	AATAAA	-16	NA	89995109	90035533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_70195.known	chr19	-	7712	5	FSM	ENSG00000267041.6	ENST00000591344.2	7712	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	5.67340285895511	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCCTTATTTCTTAAT	-5	True	NA	-17	True	AATAAA	-21	NA	36772807	36743479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36750805_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_70196.known	chr19	-	523	5	FSM	ENSG00000267041.6	ENST00000589390.5	523	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.39509972887452	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGCCTGGCCAACATG	6	True	NA	NA	False	NA	NA	NA	36772825	36714382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36714501_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_70197.nnic	chr19	-	1141	5	NNC	ENSG00000267041.6	novel	523	5	NA	NA	-11	-14203	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.96419413859206	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTGTCCTATCCTT	-5	True	NA	NA	False	TATAAA	-43	NA	36772836	36728585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36729311_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_702.known	chr1	-	4201	17	FSM	ENSG00000188976.11	ENST00000477976.5	4201	17	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	423.302418490611	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGGTGGCTCCTGGAGAT	8521	False	NA	-16	True	AATAAA	-27	NA	958458	944204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954524_955922_956014_956094_956216_956893_957026_957098
transcript_70203.known	chr19	+	2691	4	FSM	ENSG00000189042.14	ENST00000360729.8	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	21.4527905462721	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	15	False	NA	7	True	AATAAA	-17	NA	36689399	36721326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36689498_36712385_36712513_36712780_36712868_36718947
transcript_70204.known	chr19	+	1850	2	FSM	ENSG00000267260.3	ENST00000590750.1	1850	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCGGGCATTTCCTGTG	3	True	NA	NA	False	AATAAA	-24	NA	36773152	36777078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36773310_36775385
transcript_70205.known	chr19	+	646	2	FSM	ENSG00000267260.3	ENST00000687335.1	1273	2	65	562	37	-557	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTAGACGGCCTCCG	40	False	NA	NA	False	NA	NA	NA	36773189	36775711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36773510_36775385
transcript_70208.known	chr19	-	5032	6	FSM	ENSG00000185869.15	ENST00000391711.8	5032	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.48193472919817	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGGTCATCTTTACT	1	True	NA	NA	False	TATAAA	-20	NA	36916291	36888123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36916010
transcript_70211.known	chr19	-	4977	6	FSM	ENSG00000185869.15	ENST00000520965.5	4977	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.87054001888146	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGGTCATCTTTACT	633	False	NA	NA	False	TATAAA	-20	NA	36916021	36888123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36915795
transcript_70213.nic	chr19	+	946	5	NIC	ENSG00000267254.7	novel	850	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	3.57071421427143	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGAACATGAAGTACTT	-19	True	NA	-5	True	AATAAA	-25	NA	36797504	36828101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36797812_36801202_36801241_36801875_36801934_36823730_36823822_36827649
transcript_70216.known	chr19	-	3040	5	FSM	ENSG00000197863.9	ENST00000356725.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	8.25757228245687	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAATATTAATTTCAC	-15	True	NA	NA	False	AGTAAA	-15	NA	36838387	36817427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36838336
transcript_70217.known	chr19	-	922	5	FSM	ENSG00000197863.9	ENST00000528994.5	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	5.67340285895511	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGGTTCAGATCATAC	471	False	NA	-91	True	AATACA	-43	NA	36850313	36819806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850001
transcript_70218.known	chr19	-	581	5	FSM	ENSG00000197863.9	ENST00000586323.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	9.98436277385793	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATACGCACCTGTGAAAA	-3	True	NA	NA	False	NA	NA	NA	36850787	36819923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850699
transcript_70219.known	chr19	-	2451	5	FSM	ENSG00000197863.9	ENST00000615484.4	2451	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	11.7127067751225	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAGCACACATCCAGCA	672	False	NA	NA	False	NA	NA	NA	36838027	36818321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36837671
transcript_7023.known	chr1	+	9433	12	FSM	ENSG00000162664.17	ENST00000370447.3	9433	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	70.8999994171747	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTCCTGTCTGAAA	-8	True	NA	7	True	AATAAA	-14	NA	89995136	90035531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007611_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_70233.nnic	chr19	-	1155	5	NNC	ENSG00000197863.9	novel	578	4	NA	NA	-21	-1629	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.1803398874989	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTTGTCTAGTTCCC	-13	True	NA	NA	False	AATAAA	-29	NA	36850288	36821565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36822132_36823284_36823381_36823666_36823791_36825610_36825693_36850001
transcript_70234.known	chr19	+	1474	4	FSM	ENSG00000267254.7	ENST00000665341.1	1474	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.71404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATATAATCTGTTAATA	68	False	NA	NA	False	NA	NA	NA	36797591	36813667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36812509
transcript_70235.known	chr19	+	3024	4	FSM	ENSG00000267254.7	ENST00000657461.1	3024	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	0.471404520791032	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTATCTCTATCTATT	NA	False	NA	NA	False	CATAAA	-20	NA	36797501	36830267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36827649
transcript_70236.known	chr19	+	850	4	FSM	ENSG00000267254.7	ENST00000588906.5	850	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.942809041582063	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGAACATGAAGTACTT	39	False	NA	-5	True	AATAAA	-25	NA	36797562	36828101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801875_36801934_36823730_36823822_36827649
transcript_70238.known	chr19	+	581	4	FSM	ENSG00000251247.12	ENST00000532141.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	25.31578339473	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGTTCGACATCAGC	-5	True	NA	NA	False	NA	NA	NA	36850877	36877054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36850969_36851829_36851905_36854449_36854595_36876784
transcript_70239.nnic	chr19	+	1027	4	NNC	ENSG00000251247.12	novel	3103	4	NA	NA	-27	-10509	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	22.3755819291179	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTGTCTT	478	False	NA	NA	False	AATATA	-14	NA	36850848	36866545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36850969_36851829_36851905_36862916_36863012_36865808
transcript_70240.nnic	chr19	+	525	4	NNC	ENSG00000251247.12	novel	3103	4	NA	NA	-27	-11011	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	22.3755819291179	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCAGTTTGCTAGAG	478	False	NA	NA	False	CATAAA	-18	NA	36850848	36866043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36850969_36851829_36851905_36862916_36863012_36865808
transcript_70241.known	chr19	+	458	4	FSM	ENSG00000251247.12	ENST00000526123.5	458	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.8932812499432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTATGATACTGTATGT	12	True	NA	NA	False	CATAAA	-17	NA	36850894	36893034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36850969_36851829_36851905_36876784_36876877_36892817
transcript_70243.known	chr19	+	585	4	FSM	ENSG00000251247.12	ENST00000432005.6	585	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	25.694789787469	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTACATGTCCCTAGTTA	47	False	NA	NA	False	AATAAA	-21	NA	36850929	36913029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36850969_36851829_36851905_36892817_36892986_36912726
transcript_70250.known	chr19	+	881	3	FSM	ENSG00000267254.7	ENST00000663523.1	881	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACGCCTGTAATCCCA	10	True	NA	88	True	AATAAA	-24	NA	36797533	36828194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801875_36801934_36827649
transcript_70251.nnic	chr19	+	435	3	NNC	ENSG00000251247.12	novel	2959	3	NA	NA	-27	-11006	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	27.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTGCTAGAGTTTTA	478	False	NA	NA	False	CATAAA	-23	NA	36850848	36866048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36850969_36851829_36851905_36865808
transcript_70252.known	chr19	+	2959	3	FSM	ENSG00000251247.12	ENST00000420450.6	2959	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	8.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGGCCCCTTTTCAG	-7	True	NA	12	True	ATTAAA	-24	NA	36850875	36879575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36850969_36851829_36851905_36876784
transcript_70253.nic	chr19	+	412	3	ISM	ENSG00000251247.12	ENST00000432005.6	585	4	-81	19995	-27	0	5prime_fragment	FALSE	canonical	2	4	junction_2	27	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTATGATACTGTATGT	478	False	NA	NA	False	CATAAA	-17	NA	36850848	36893034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_36850969_36851829_36851905_36892817
transcript_70254.nic	chr19	+	1925	3	ISM	ENSG00000251247.12	ENST00000432005.6	585	4	-81	18482	-27	1513	5prime_fragment	FALSE	canonical	2	4	junction_2	27	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATCAGAAAAAACAATTCA	478	False	NA	NA	False	ATTAAA	-43	NA	36850848	36894547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_36850969_36851829_36851905_36892817
transcript_70256.nnic	chr19	+	3085	3	NIC	ENSG00000251247.12	novel	2959	3	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGGCCCCTTTTCAG	-31	True	NA	12	True	ATTAAA	-24	NA	36850851	36879575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36850969_36851727_36851905_36876784
transcript_70261.known	chr19	+	376	1	FSM	ENSG00000243297.2	ENST00000496160.2	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACTGATTGTCAAATAC	NA	False	NA	NA	False	NA	NA	NA	36901741	36902117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36901700_36902100
transcript_70264.known	chr19	+	2232	10	FSM	ENSG00000198453.14	ENST00000444991.5	2232	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	9.41629792788369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCACACTGGGGAGAGACC	19	True	NA	NA	False	NA	NA	NA	36916363	36997440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36974419_36974467_36991175_36991300_36991750_36991847_36996316
transcript_70268.known	chr19	+	1827	8	FSM	ENSG00000198453.14	ENST00000427117.5	1827	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	9.32628499654255	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGTATGAGTTGATATG	-16	True	NA	NA	False	ATTAAA	-18	NA	36916328	36979907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36974419_36974467_36979003
transcript_70269.known	chr19	+	4096	7	FSM	ENSG00000198453.14	ENST00000333987.12	4096	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	4.53382350291182	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGAATGTTTACTTGT	-13	True	NA	19	True	AATAAA	-27	NA	36916331	36952734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36949511
transcript_70272.known	chr19	+	1914	6	FSM	ENSG00000198453.14	ENST00000587857.5	1914	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	9.03327183250897	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCAGTGCTCATTACTT	110	False	NA	NA	False	AATAAA	-14	NA	36916454	36950936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36925199_36925259_36936745_36936873_36937146_36937243_36949511
transcript_70274.known	chr19	+	3774	5	FSM	ENSG00000198453.14	ENST00000415168.5	3774	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.0995049383621	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTTGTAATAGTGTT	-2	True	NA	28	True	AATAAA	-36	NA	36916342	36952743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36936745_36936873_36937146_36937243_36949511
transcript_70276.nic	chr19	+	795	3	ISM	ENSG00000198453.14	ENST00000333987.12	4096	7	-19	29703	-16	-13793	5prime_fragment	FALSE	canonical	3	17	junction_2	6	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTTCTTAAGAGTAT	-32	True	NA	NA	False	AATAAA	-14	NA	36916312	36923031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_36916592_36917578_36917649_36922585
transcript_70278.known	chr19	+	3639	5	FSM	ENSG00000197050.11	ENST00000337995.4	3639	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3.64005494464026	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGAAGTGGGA	-13	True	NA	63	True	AATAAA	-20	NA	37078432	37130368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127
transcript_70280.nic	chr19	+	1218	4	ISM	ENSG00000197050.11	ENST00000587082.5	571	6	-1	19747	-1	-19747	5prime_fragment	FALSE	canonical	3	38	junction_2	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAACTTGCATTGGA	-14	True	NA	NA	False	AAAACA	-4	NA	37078431	37091940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994
transcript_70282.known	chr19	+	1945	6	FSM	ENSG00000197050.11	ENST00000304239.11	1945	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	17.7019772906871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGATGCTATTGTAG	-11	True	NA	5	True	AATAAA	-13	NA	37078434	37130310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127_37128403_37130036
transcript_70283.known	chr19	+	465	2	FSM	ENSG00000197050.11	ENST00000586540.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGCTATTGTAGTTCT	NA	False	NA	9	True	AATAAA	-17	NA	37128612	37130314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37128907_37130143
transcript_70284.known	chr19	-	6822	6	FSM	ENSG00000196967.11	ENST00000356958.8	6822	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7911230946827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGTTAGTCAACATTT	8953	False	NA	NA	False	AATAAA	-20	NA	37172741	37147437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37165594_37165697_37169838_37170055_37172626
transcript_70285.known	chr19	-	8572	5	FSM	ENSG00000196967.11	ENST00000292841.10	8572	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	26.2047228567676	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGGTGTGTTCTATTAT	4	True	NA	NA	False	AATAAA	-16	NA	37172695	37145539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37153607_37155864_37155958_37156228_37156356_37169838_37170055_37172626
transcript_70286.known	chr19	-	596	3	FSM	ENSG00000196967.11	ENST00000588354.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	3.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTTCTTTTTTTTT	5	True	NA	NA	False	AATAAA	-17	NA	37172694	37165384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37165697_37169838_37170055_37172626
transcript_70293.known	chr19	+	6732	6	FSM	ENSG00000188283.12	ENST00000684119.1	6732	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.00285656000464	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCAGTATCACTGTT	0	True	NA	NA	False	AATAAA	-18	NA	37218213	37248740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37218275_37224817_37224940_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_70295.nnic	chr19	+	1834	5	NIC	ENSG00000188283.12	novel	6732	6	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	6.42261628933256	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCTCATATTTTAAACC	10	True	NA	NA	False	AATAAA	-25	NA	37217934	37243685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_37218275_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_70299.known	chr19	+	2268	8	FSM	ENSG00000188283.12	ENST00000589413.5	2268	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.63311138842179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTGTGTTTTTAGAG	66	False	NA	18	True	NA	NA	NA	37218279	37243921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37218330_37219275_37219491_37219598_37219750_37224817_37224940_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_70308.nic	chr19	+	3010	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_4	29.1742847194047	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCAATTGTCAGTGTAT	-18	True	NA	32	True	AATAAA	-22	NA	37317882	37364447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362108
transcript_70312.nnic	chr19	+	1475	6	NNC	ENSG00000181666.19	novel	958	5	NA	NA	-4	607	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	48.6431906848225	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTTCCTCAGTGGT	-18	True	NA	NA	False	ATTAAA	-23	NA	37317882	37329712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578_37329065_37329171
transcript_70313.nnic	chr19	+	1069	6	NNC	ENSG00000181666.19	novel	575	6	NA	NA	-4	607	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_4	48.1439508141989	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTTCCTCAGTGGT	-18	True	NA	NA	False	ATTAAA	-23	NA	37317882	37329712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328984_37329065_37329171
transcript_70315.known	chr19	+	2854	6	FSM	ENSG00000181666.19	ENST00000544914.5	2854	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	37.451835736049	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	10	True	NA	31	True	AATAAA	-21	NA	37317910	37364446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347776_37347873_37362108
transcript_70323.known	chr19	+	958	5	FSM	ENSG00000181666.19	ENST00000589218.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	43.9914764471483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGAGTTCATGCCAC	-1	True	NA	NA	False	AAGAAA	-20	NA	37317899	37329105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578
transcript_70324.nnic	chr19	+	1176	5	NNC	ENSG00000181666.19	novel	958	5	NA	NA	-4	607	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	43.1335136523794	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTTCCTCAGTGGT	-18	True	NA	NA	False	ATTAAA	-23	NA	37317882	37329712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328984
transcript_70325.known	chr19	+	480	5	FSM	ENSG00000181666.19	ENST00000589801.1	480	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	46.9966754143312	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAATTGCTCTGTGATG	103	False	NA	NA	False	ATTAAA	-13	NA	37318038	37344797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37344609
transcript_70328.known	chr19	+	2152	5	FSM	ENSG00000181666.19	ENST00000589392.5	2152	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	41.4849370253831	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGCCATTGCTAGATA	8	True	NA	NA	False	NA	NA	NA	37334670	37363864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37334783_37335199_37335258_37347189_37347317_37347776_37347873_37362105
transcript_70329.known	chr19	+	734	5	FSM	ENSG00000181666.19	ENST00000591259.5	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	37.6497011940334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTGTGTTCTTATTGA	49	False	NA	NA	False	AGTAAA	-33	NA	37334711	37359776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37359425
transcript_70331.known	chr19	+	2772	5	FSM	ENSG00000181666.19	ENST00000392153.8	2785	5	17	-4	-5	4	multi-exon	FALSE	canonical	3	30	junction_1	34.8164831653055	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGTCAGTGTATCCTC	3	True	NA	36	True	AATAAA	-26	NA	37334665	37364451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37362108
transcript_70334.known	chr19	+	573	4	FSM	ENSG00000181666.19	ENST00000592768.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	42.166337284616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAAGCAGAATGGATTCA	NA	False	NA	NA	False	NA	NA	NA	37334623	37362299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37334783_37347189_37347317_37347776_37347873_37362108
transcript_70336.nic	chr19	+	418	3	ISM	ENSG00000181666.19	ENST00000324411.8	2929	6	-35	19657	3	1	5prime_fragment	FALSE	canonical	2	3	junction_2	13.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAATTGCTCTGTGATGT	-20	True	NA	NA	False	ATTAAA	-14	NA	37334642	37344798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_37334783_37335168_37335258_37344609
transcript_70338.known	chr19	+	664	5	FSM	ENSG00000181666.19	ENST00000591485.5	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	32.4451460160068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAGGCCTGAGCCACT	18	True	NA	NA	False	NA	NA	NA	37317918	37325047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795
transcript_70339.known	chr19	+	1142	5	FSM	ENSG00000189164.15	ENST00000483919.5	1142	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	8.4372685153431	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATCTGATGTAAATTAAC	-22	True	NA	NA	False	AATAAA	-25	NA	37371158	37385644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37384867
transcript_7034.known	chr1	+	1956	10	FSM	ENSG00000162664.17	ENST00000394583.7	1956	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	70.517137396995	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCCCTGGATTAGCAG	-33	True	NA	8	True	AATAAA	-17	NA	89995111	90028226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005093_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_70340.known	chr19	+	573	4	FSM	ENSG00000189164.15	ENST00000589615.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.0252236056942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGATGATCCACCCACC	NA	False	NA	NA	False	NA	NA	NA	37371060	37379692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37379486
transcript_70344.known	chr19	-	4066	6	FSM	ENSG00000196437.12	ENST00000316950.11	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_5	5.84465567848098	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGTGGTGACAAATC	-5	True	NA	-18	True	AATAAA	-15	NA	37467444	37411156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467083
transcript_70349.nic	chr19	-	964	6	NIC	ENSG00000196437.12	novel	4066	6	NA	NA	-38	46	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	24.7014169634052	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTAATAGCTCATCCCA	1764	False	NA	NA	False	AATATA	-18	NA	37467499	37414138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467258
transcript_70350.known	chr19	+	5283	5	FSM	ENSG00000171827.11	ENST00000330173.6	5283	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.49106001094224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTCTATCAGTTCT	-12	True	NA	19	True	AATAAA	-15	NA	37469355	37488652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37469558_37470303_37470388_37475880_37476008_37476338_37476435_37483878
transcript_70352.known	chr19	+	587	5	FSM	ENSG00000171827.11	ENST00000590664.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.49106001094224	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTTACAAGCTATAACC	-1	True	NA	NA	False	AATAGA	-1	NA	37469418	37483960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37469558_37470303_37470388_37475880_37476008_37476338_37476494_37483878
transcript_70356.known	chr19	-	3689	5	FSM	ENSG00000196437.12	ENST00000392149.6	3689	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.0749198145912	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGGTGACAAATCTG	-13	True	NA	-16	True	AATAAA	-17	NA	37467229	37411154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37467086
transcript_70357.known	chr19	-	579	4	FSM	ENSG00000196437.12	ENST00000592490.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	31.2089730686545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGAGAAAGGAGCATT	8	True	NA	NA	False	NA	NA	NA	37467208	37414184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37414420_37444906_37444965_37465312_37465474_37467083
transcript_70360.nic	chr19	+	1886	4	NIC	ENSG00000171827.11	novel	1985	6	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	3.85861230093008	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATATAGCTTTCAAACAGG	257	False	NA	-12	True	NA	NA	NA	37469336	37485320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_37469558_37475880_37476008_37476338_37476435_37483878
transcript_70361.known	chr19	+	1964	4	FSM	ENSG00000171827.11	ENST00000588644.5	1964	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACCTTTAAATCCATTT	-12	True	NA	26	True	AATATA	-32	NA	37469355	37485358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37469558_37475880_37476008_37476338_37476494_37483878
transcript_70368.known	chr19	+	7117	8	FSM	ENSG00000188227.14	ENST00000627814.3	7117	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	10.6770782520313	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCTTGAAAATGTTTC	1	True	NA	NA	False	AATAAA	-24	NA	37506938	37543333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37506967_37508264_37508404_37520183_37520313_37522531_37522648_37523409_37523455_37532355_37532483_37533307_37533404_37536896
transcript_70385.known	chr19	+	3869	7	FSM	ENSG00000188227.14	ENST00000587986.5	3869	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	9.15908777602272	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTCTTACGTTTACAT	52	False	NA	10	True	AATAAA	-18	NA	37507217	37536530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37507308_37508264_37508404_37520183_37520313_37522531_37522648_37523409_37523455_37532355_37532483_37533307
transcript_70391.known	chr19	+	3191	5	FSM	ENSG00000171817.17	ENST00000316433.9	3191	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACCTCATTGCTTAAG	-18	True	NA	NA	False	AATAAA	-16	NA	37594875	37614179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37595096_37598375_37598457_37599625_37599753_37601009_37601106_37611512
transcript_70398.known	chr19	-	3140	4	FSM	ENSG00000196381.11	ENST00000358582.9	3140	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGGGAATAGTTATTG	0	True	NA	NA	False	ATTAAA	-15	NA	37692315	37667750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37670557_37686450_37686523_37691520_37691619_37692151
transcript_7040.nic	chr1	+	1060	7	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-13	22323	-13	6761	5prime_fragment	TRUE	canonical	3	142	junction_4	37.9239004088744	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAGAAATACGGAGATG	NA	False	NA	NA	False	NA	NA	NA	89995096	90013210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125
transcript_70400.known	chr19	-	913	3	FSM	ENSG00000266916.8	ENST00000589025.6	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	1.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-40	NA	37507122	37497158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37497593_37505845_37506041_37506838
transcript_70403.known	chr19	-	1033	4	FSM	ENSG00000266916.8	ENST00000585890.3	1038	4	0	5	0	-5	multi-exon	TRUE	canonical	0	0	junction_2	5.24933858267454	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTTCAAGGTTCT	17	False	37507104	NA	False	AATAAA	-35	NA	37507087	37497163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37497593_37498023_37498184_37505845_37506041_37506838
transcript_70406.known	chr19	-	2904	4	FSM	ENSG00000180479.14	ENST00000593133.5	2904	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	4.49691252107735	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATATTTGTTGTTAAAA	22	True	NA	NA	False	ATTAAA	-26	NA	37594746	37564252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594086
transcript_70408.known	chr19	-	527	4	FSM	ENSG00000196381.11	ENST00000593040.5	527	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCTTGCTTAAGGGC	0	True	NA	NA	False	ATTAAA	-25	NA	37692315	37670653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37670847_37686450_37686523_37691520_37691619_37692151
transcript_70409.known	chr19	-	403	4	FSM	ENSG00000196381.11	ENST00000585624.1	403	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGTTCCAGTTTCTTG	101	False	NA	NA	False	AATAAA	-28	NA	37692233	37678622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37678774_37686450_37686523_37691520_37691619_37692151
transcript_70410.nnic	chr19	-	662	4	NNC	ENSG00000196381.11	novel	3140	4	NA	NA	-27	-5200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATTTTTGTAAATAAAC	NA	False	NA	NA	False	AATAAA	-18	NA	37692342	37683822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_37684124_37686450_37686523_37691520_37691619_37692151
transcript_70411.known	chr19	-	545	3	FSM	ENSG00000266916.8	ENST00000588845.2	545	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	480	False	NA	NA	False	AATAAA	-40	NA	37506624	37497158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37497593_37505971_37506041_37506582
transcript_70417.known	chr19	-	448	3	FSM	ENSG00000266916.8	ENST00000585397.1	448	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTGAGTTTAAAGCCA	837	False	NA	NA	False	NA	NA	NA	37506267	37497362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37497593_37505845_37506041_37506244
transcript_70418.nic	chr19	-	1156	3	NIC	ENSG00000266916.8	novel	913	3	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	6.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	-5	True	NA	NA	False	AATAAA	-40	NA	37507109	37497158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_37497593_37505845_37506041_37506582
transcript_70422.known	chr19	-	521	3	FSM	ENSG00000120784.17	ENST00000591444.1	521	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTAAGTTGGAATTTCTCT	50	False	NA	NA	False	NA	NA	NA	37655409	37647815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37647900_37654711_37654786_37655046
transcript_70423.nnic	chr19	-	432	3	NIC	ENSG00000196381.11	novel	403	4	NA	NA	-27	-8	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAAAGGTAAAGTTCCA	NA	False	NA	NA	False	AATAAA	-20	NA	37692342	37678630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_37678774_37691520_37691619_37692151
transcript_70424.known	chr19	-	2289	4	FSM	ENSG00000180479.14	ENST00000451802.7	2289	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2.82842712474619	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATCTGATATTTGTT	-24	True	NA	NA	False	ATTAAA	-19	NA	37594792	37564259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594740
transcript_70425.known	chr19	-	549	4	FSM	ENSG00000120784.17	ENST00000477900.6	549	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGCTAATTTTTGTAT	-8	True	NA	NA	False	NA	NA	NA	37655467	37644395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37644737_37647813_37647900_37654711_37654786_37655419
transcript_70435.known	chr19	-	2443	6	FSM	ENSG00000189144.15	ENST00000586155.5	2443	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.4	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	8	True	NA	NA	False	NA	NA	NA	37779585	37738301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37740195_37770004_37770098_37770406_37770598_37771563_37771697_37773660_37773752_37779543
transcript_70440.known	chr19	-	2253	5	FSM	ENSG00000189144.15	ENST00000536220.7	2253	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.12132034355964	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	7	True	NA	NA	False	NA	NA	NA	37779586	37738301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37740195_37770004_37770098_37771563_37771697_37773660_37773752_37779543
transcript_70443.known	chr19	-	453	4	FSM	ENSG00000189144.15	ENST00000585724.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATACTGGTGAGAAA	333	False	NA	NA	False	NA	NA	NA	37779563	37739945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37740195_37770004_37770098_37773660_37773752_37779543
transcript_70446.nnic	chr19	+	978	3	NNC	ENSG00000267422.1	novel	446	2	NA	NA	-24	-3142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGCGG	-14	True	NA	NA	False	ACTAAA	-23	NA	37779661	37789630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37780024_37785218_37785355_37789150
transcript_70448.nic	chr19	-	814	3	ISM	ENSG00000189144.15	ENST00000589632.5	2501	8	-363	34353	-45	-2233	5prime_fragment	FALSE	canonical	1	3	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAAAAAATGTACACGA	NA	False	NA	NA	False	NA	NA	NA	37779923	37772639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_37772983_37773660_37773752_37779543
transcript_70449.nnic	chr19	-	847	3	NNC	ENSG00000189144.15	novel	2266	3	NA	NA	-2	-13780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCATTGCTTTTCACTG	433	False	NA	NA	False	AATAAA	-16	NA	37817294	37807814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_37808232_37810604_37810801_37817060
transcript_70450.nnic	chr19	+	684	2	NNC	ENSG00000267422.1	novel	446	2	NA	NA	-40	-3316	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAGAAGAAG	256	False	NA	NA	False	NA	NA	NA	37779645	37789456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37780024_37789150
transcript_70451.nnic	chr19	+	858	2	NNC	ENSG00000267422.1	novel	446	2	NA	NA	-40	-3142	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGCGG	256	False	NA	NA	False	ACTAAA	-23	NA	37779645	37789630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37780024_37789150
transcript_70453.known	chr19	+	6580	5	FSM	ENSG00000267640.7	ENST00000443870.3	6580	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	2.87228132326901	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCTGTTCTGAGTAG	-3	True	NA	4	True	AATAAA	-19	NA	37817410	37832160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37823810_37823907_37826171
transcript_70466.known	chr19	-	2301	12	FSM	ENSG00000011332.22	ENST00000355526.10	2301	12	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_11	19.1220525195907	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	0	True	NA	-5	True	ATTAAA	-26	NA	38224222	38211005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_70469.known	chr19	-	2356	12	FSM	ENSG00000011332.22	ENST00000614244.4	2356	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	19.9192585078896	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGCCTCGTTCTCCCGT	5472	False	NA	-8	True	ATTAAA	-23	NA	38224250	38211008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_70471.known	chr19	-	1567	11	FSM	ENSG00000011332.22	ENST00000471976.5	1567	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	20.0509351402871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGAGGGGGAGAGGGGGA	5472	False	NA	NA	False	NA	NA	NA	38224250	38211973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_70477.known	chr19	-	1257	9	FSM	ENSG00000167645.17	ENST00000337679.12	1257	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	519.272507937788	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	21	True	NA	-12	True	AATAAA	-17	NA	38315923	38305113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38306913_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_70485.known	chr19	-	940	8	FSM	ENSG00000167645.17	ENST00000591784.5	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	380.644887805215	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	6087	False	NA	NA	False	NA	NA	NA	38315799	38305351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315746
transcript_70486.known	chr19	-	1181	8	FSM	ENSG00000167645.17	ENST00000592694.5	1181	8	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_7	252.349773455942	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCCTCGCGCACG	5972	False	NA	-2	True	AATAAA	-27	NA	38315914	38305103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_70491.known	chr19	-	1077	8	FSM	ENSG00000167645.17	ENST00000591755.5	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	449.630142790853	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAAT	5966	False	NA	NA	False	NA	NA	NA	38315920	38306696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_70493.known	chr19	+	1246	7	FSM	ENSG00000167642.13	ENST00000587090.5	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1321.8644240449	2383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCATGTGCTTTCTTT	0	True	NA	16	True	AATAAA	-26	NA	38264575	38292451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38264724_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_70506.known	chr19	+	1367	6	FSM	ENSG00000167642.13	ENST00000454580.7	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	1332.06831656638	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	0	True	NA	33	True	AATAAA	-43	NA	38264575	38292468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38264999_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_70516.known	chr19	+	520	4	FSM	ENSG00000167644.12	ENST00000588605.5	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	28.8790581563873	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	0	True	NA	24	True	ATTAAA	-18	NA	38304163	38305006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38304284_38304374_38304491_38304564_38304687_38304844
transcript_70518.known	chr19	+	374	4	FSM	ENSG00000167644.12	ENST00000301246.10	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	10.9645894689324	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	25	True	NA	24	True	ATTAAA	-18	NA	38304250	38305006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38304284_38304374_38304491_38304623_38304687_38304844
transcript_70520.known	chr19	-	560	4	FSM	ENSG00000167641.11	ENST00000301242.9	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	15.2534149181967	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTGTTTTTCC	0	True	NA	-1	True	NA	NA	NA	38256374	38251236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38251447_38252305_38252339_38252893_38252975_38256138
transcript_70523.known	chr19	+	1688	7	FSM	ENSG00000167642.13	ENST00000301244.12	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	3278	junction_5	131.776325643114	7163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGAACTTTCGCCAA	-3	True	NA	23	True	AATAAA	-16	NA	38264572	38292615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38264999_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_70524.known	chr19	+	462	3	FSM	ENSG00000167644.12	ENST00000589986.2	462	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	2	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCGACTGGTCAGCGTG	25	True	NA	21	True	ATTAAA	-15	NA	38304250	38305003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38304491_38304623_38304687_38304844
transcript_70525.known	chr19	-	1404	7	FSM	ENSG00000167645.17	ENST00000392124.7	1404	7	0	0	0	0	multi-exon	FALSE	canonical	3	1154	junction_1	37.8392065925748	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGACAGCCTCTCCTTGG	6021	False	NA	-13	True	AATAAA	-16	NA	38309923	38305114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404
transcript_70526.known	chr19	-	964	8	FSM	ENSG00000167645.17	ENST00000329420.12	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_7	345.81568760818	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-19	True	NA	NA	False	NA	NA	NA	38315793	38305351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
transcript_70527.known	chr19	+	502	3	FSM	ENSG00000167644.12	ENST00000591852.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	34.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	47	False	NA	24	True	ATTAAA	-18	NA	38304272	38305006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38304491_38304564_38304687_38304844
transcript_7053.nnic	chr1	+	1393	4	NNC	ENSG00000287406.1	novel	968	6	NA	NA	-22733	248	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.74165738677394	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTTTTGGTATTTT	NA	False	NA	16	True	AGTAAA	-26	NA	90219354	90284436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_90219859_90281560_90281691_90282219_90282348_90283805
transcript_70539.known	chr19	+	771	6	FSM	ENSG00000099341.12	ENST00000592561.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	1913	junction_3	61.0737259384099	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGACCAAGGGGTGAAGT	-6	True	NA	NA	False	NA	NA	NA	38374771	38382254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116
transcript_70540.known	chr19	-	369	4	FSM	ENSG00000179168.15	ENST00000591809.5	369	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGCAGCCTGTCAATC	8	True	NA	-5	True	AATAAA	-14	NA	38388024	38384352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38384530_38385420_38385501_38387760_38387823_38387974
transcript_70542.nnic	chr19	+	813	4	NIC	ENSG00000188766.13	novel	478	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	3.85861230093008	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAAATGGATGAACAAAT	-27	True	NA	NA	False	AATAAA	-17	NA	38388687	38392647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_38388808_38390298_38390387_38391945_38392115_38392211
transcript_7055.nnic	chr1	+	1254	3	NNC	ENSG00000287406.1	novel	968	6	NA	NA	-22733	237	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTTATTTTTATTT	NA	False	NA	5	True	AGTAAA	-15	NA	90219354	90284425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_90219859_90281560_90281691_90283805
transcript_70550.nnic	chr19	+	1109	10	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	-53	-20815	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	3.10714032313546	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTAGCCGGGTGTGGTGG	NA	False	NA	5	True	AATAAA	-20	NA	38433637	38447071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
transcript_70554.nnic	chr19	+	983	9	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	-47	-20815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.16599457994296	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTAGCCGGGTGTGGTGG	NA	False	NA	5	True	AATAAA	-20	NA	38433643	38447071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_38433875_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
transcript_70555.nic	chr19	+	1373	8	ISM	ENSG00000196218.14	ENST00000599547.6	11455	80	-139	88318	0	-20812	intron_retention	FALSE	canonical	2	8	junction_3	3.32584192194938	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGTGTGGTGGTGT	-1	True	NA	8	True	AATAAA	-23	NA	38433690	38447074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471
transcript_70557.known	chr19	-	552	2	FSM	ENSG00000268055.2	ENST00000595853.2	571	2	14	5	14	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATTCTGAGTGAGTCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	38537128	38535516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38535935_38536994
transcript_7056.nnic	chr1	+	2823	3	NNC	ENSG00000287406.1	novel	968	6	NA	NA	-22733	1806	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	90219354	90285994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_90219859_90281560_90281691_90283805
transcript_70560.nnic	chr19	-	717	7	NNC	ENSG00000104814.13	novel	2700	32	NA	NA	-509	0	at_least_one_novel_splicesite	TRUE	canonical	3	16	junction_2	42.621395253245	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	38596239	38587640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38587818_38589177_38589276_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596077
transcript_70568.nnic	chr19	-	619	6	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-509	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_5	34.8505380159331	507	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	38596239	38587640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596077
transcript_7058.known	chr1	-	5238	3	FSM	ENSG00000233593.11	ENST00000659034.2	5247	3	9	0	1	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATACCTTCAAAACCT	-22	True	NA	NA	False	AAAAAG	-39	NA	90851657	90778450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90783424_90789397_90789488_90851482
transcript_70583.nnic	chr19	-	474	4	NNC	ENSG00000104814.13	novel	443	5	NA	NA	-517	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	53.7959106252511	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-1	True	AATAAA	-19	NA	38596247	38587640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38596077
transcript_70588.known	chr19	+	516	3	FSM	ENSG00000267291.1	ENST00000589557.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	NA	False	NA	8	True	AATACA	-17	NA	38596345	38601694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38596437_38597252_38597396_38601412
transcript_7059.known	chr1	-	2292	2	FSM	ENSG00000233593.11	ENST00000655784.1	2292	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCATGCTCTGTGTAAT	-18	True	NA	NA	False	ATTAAA	-25	NA	90851653	90830075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90832197_90851482
transcript_70595.nic	chr19	+	1374	2	NIC	ENSG00000267291.1	novel	516	3	NA	NA	-42	0	intron_retention	FALSE	canonical	2	8	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	NA	False	NA	8	True	AATACA	-17	NA	38596303	38601694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_38597396_38601412
transcript_70596.known	chr19	-	443	5	FSM	ENSG00000104814.13	ENST00000593196.1	443	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	56.8572774585629	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	381	False	NA	-1	True	AATAAA	-19	NA	38595730	38587640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38587818_38592449_38592498_38593281_38593338_38595484_38595556_38595639
transcript_7060.known	chr1	-	717	2	FSM	ENSG00000233593.11	ENST00000670028.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTCATGATTGTAAT	15	True	NA	NA	False	AATAAA	-15	NA	90851620	90837186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90837766_90851482
transcript_70600.known	chr19	+	760	8	FSM	ENSG00000178982.10	ENST00000593149.5	760	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	732.079509454585	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	13	False	NA	24	True	AATAAA	-16	NA	38619094	38636953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619224_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_70608.known	chr19	+	780	7	FSM	ENSG00000178982.10	ENST00000614624.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	756.63017533153	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCTCCTCCCTGGCT	0	True	NA	26	True	AATAAA	-18	NA	38619081	38636955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_70618.known	chr19	+	772	8	FSM	ENSG00000178982.10	ENST00000248342.9	772	8	0	0	0	0	multi-exon	FALSE	canonical	3	1657	junction_7	215.675493200658	26782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTGTCTCCTCCCTGGC	-8	True	NA	25	True	AATAAA	-17	NA	38619187	38636954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_70619.known	chr19	+	670	7	FSM	ENSG00000178982.10	ENST00000592558.1	670	7	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	751.043940126009	2515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	15	True	NA	24	True	AATAAA	-16	NA	38619210	38636953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38634992_38635119_38636888
transcript_7062.known	chr1	-	5541	6	FSM	ENSG00000122482.22	ENST00000337393.10	5541	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_5	52.0099990386464	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	-10	True	NA	-27	True	AATAAA	-18	NA	91022035	90915303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021989
transcript_70620.known	chr19	+	507	4	FSM	ENSG00000178982.10	ENST00000588422.3	507	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	984.499985892444	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTGGCGGTGGGCCC	0	True	NA	NA	False	NA	NA	NA	38619195	38626192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619318_38620336_38620436_38624076_38624198_38626027
transcript_70621.known	chr19	+	501	5	FSM	ENSG00000178982.10	ENST00000588934.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	943.620785856268	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTACTGTCTCCTCCCTG	-10	True	NA	23	True	AATAAA	-15	NA	38619185	38636952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38636888
transcript_70622.known	chr19	+	4990	21	FSM	ENSG00000130402.13	ENST00000252699.7	4990	21	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	37.0619413954531	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTCCTTACAGTCTA	0	True	NA	NA	False	AATATA	-17	NA	38647648	38731589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_70623.known	chr19	+	2923	21	FSM	ENSG00000130402.13	ENST00000424234.7	2923	21	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	33.035246328732	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCCTCCGGGGTGGGT	11	True	NA	NA	False	NA	NA	NA	38647659	38729533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_70628.nic	chr19	-	1487	8	ISM	ENSG00000182472.9	ENST00000328867.9	3129	21	8757	-5	-40	0	intron_retention	FALSE	canonical	2	7	junction_4	9.86645522847543	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	8867	False	NA	-6	True	AATAAA	-38	NA	38735717	38730186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38734812_38734871_38735369
transcript_70629.nnic	chr19	-	1336	8	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-21	0	combination_of_known_splicesites	TRUE	canonical	2	4	junction_7	11.0675108275695	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	8886	False	NA	-6	True	AATAAA	-38	NA	38735698	38730186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38734812_38734871_38735501
transcript_7063.known	chr1	-	5702	6	FSM	ENSG00000122482.22	ENST00000370440.5	5702	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	67.0390930726244	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATTTCTTATTTT	11	True	NA	-21	True	AATAAA	-24	NA	91021473	90915297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021272
transcript_70635.known	chr19	-	1118	7	FSM	ENSG00000182472.9	ENST00000593700.5	1118	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	12.3827837473378	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATCAGAATAAACTCAAA	-10	True	NA	NA	False	AAGAAA	-6	NA	38735677	38730457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38735369
transcript_7064.known	chr1	-	2036	4	FSM	ENSG00000122482.22	ENST00000347275.9	2036	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	91.6854526204797	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	27	True	NA	-27	True	AATAAA	-18	NA	91021457	90915303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021272
transcript_70643.known	chr19	-	1046	6	FSM	ENSG00000182472.9	ENST00000594552.5	1046	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	11.4647285183732	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	9174	False	NA	-6	True	AATAAA	-38	NA	38735410	38730186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735369
transcript_70644.nnic	chr19	-	1202	6	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	13.212115651931	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	8886	False	NA	-6	True	AATAAA	-38	NA	38735698	38730186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735501
transcript_70649.known	chr19	-	896	5	FSM	ENSG00000182472.9	ENST00000597987.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	12.0830459735946	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACGGCAGAGATATGT	9179	False	NA	-93	True	NA	NA	NA	38735405	38730273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38735369
transcript_70650.nnic	chr19	-	1149	5	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	13.6014705087354	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	8881	False	NA	-6	True	AATAAA	-38	NA	38735703	38730186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38735501
transcript_70657.nnic	chr19	-	1185	4	NIC	ENSG00000182472.9	novel	1046	6	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_3	15.1070255914995	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-19	True	NA	-6	True	AATAAA	-38	NA	38735686	38730186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38735369
transcript_70658.nnic	chr19	-	1073	4	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	15.5777619273972	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	8878	False	NA	-6	True	AATAAA	-38	NA	38735706	38730186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38735501
transcript_7066.known	chr1	-	1253	4	FSM	ENSG00000122482.22	ENST00000361321.5	1253	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	81.7081527280003	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCTAAAAGAAATATGT	16	False	NA	NA	False	AAAAAG	-25	NA	91022272	90916184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021989
transcript_70660.nnic	chr19	+	886	3	NNC	ENSG00000130402.13	novel	441	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	96.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCACAAAAACAAAAAAACTA	NA	False	NA	-35	True	AAAAAG	-42	NA	38647626	38730144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_38647908_38700599_38700640_38729579
transcript_70661.nnic	chr19	+	1273	3	NNC	ENSG00000130402.13	novel	441	3	NA	NA	-22	387	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	96.5	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCAGCATCATCTTTT	NA	False	NA	23	True	AATAAA	-24	NA	38647626	38730531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_38647908_38700599_38700640_38729579
transcript_70665.known	chr19	-	2552	1	FSM	ENSG00000182472.9	ENST00000601685.1	2552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	-5	True	NA	NA	False	NA	NA	NA	38735672	38733120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38733100_38735700
transcript_70666.known	chr19	+	1580	1	FSM	ENSG00000267892.1	ENST00000602255.1	1580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTGTGCCTGAAGCCC	2059	False	NA	17	True	AATAAA	-29	NA	38738283	38739863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38738300_38739900
transcript_70669.known	chr19	+	499	4	FSM	ENSG00000178934.5	ENST00000314980.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.09120616516523	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTGTCCCATTCA	-2	True	NA	NA	False	AATAAA	-20	NA	38789199	38791754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38789233_38789615_38789705_38790688_38790891_38791579
transcript_70670.known	chr19	-	1121	10	FSM	ENSG00000171747.9	ENST00000307751.9	1121	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTGTCTCCATCTG	-2	True	NA	NA	False	AATAAA	-19	NA	38812945	38801673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38801911_38801991_38802158_38802315_38802405_38803521_38803552_38803741_38803781_38803868_38803896_38806460_38806596_38808743_38808949_38812430_38812520_38812841
transcript_70672.known	chr19	-	2142	13	FSM	ENSG00000104824.18	ENST00000221419.10	2142	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	404.498274615191	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-28	True	NA	0	True	AATAAA	-43	NA	38849986	38836369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_70674.known	chr19	-	1633	13	FSM	ENSG00000104824.18	ENST00000600873.5	1633	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	537.995217605758	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTCCTTTTTTTTTT	4	True	NA	-21	True	NA	NA	NA	38852338	38836634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_70694.known	chr19	-	1200	10	FSM	ENSG00000104823.9	ENST00000221418.9	1200	10	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_8	46.5426924685522	9567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTTCTTGGATA	0	True	NA	NA	False	AATAAA	-14	NA	38831794	38815421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_70695.known	chr19	-	560	5	FSM	ENSG00000104823.9	ENST00000595470.1	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	1708	junction_3	25.4165300542777	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCGGGTGCTCCCCAGG	5	True	NA	NA	False	GGGGCT	-33	NA	38831789	38817295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_70696.known	chr19	-	588	2	FSM	ENSG00000104824.18	ENST00000595804.5	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	1559	junction_1	0	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	9845	False	NA	-25	True	AATAAA	-18	NA	38837585	38836394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38836781_38837383
transcript_70697.known	chr19	-	1952	14	FSM	ENSG00000104824.18	ENST00000388749.7	1952	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	658.620838027483	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	-5	True	NA	-25	True	AATAAA	-18	NA	38852347	38836394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38841612_38841683_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_70698.known	chr19	-	493	2	FSM	ENSG00000269688.1	ENST00000600473.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTG	7144	False	NA	NA	False	NA	NA	NA	38845499	38844728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38844935_38845212
transcript_70716.nic	chr19	-	638	4	ISM	ENSG00000187994.14	ENST00000598904.5	1846	11	6682	0	-56	0	3prime_fragment	FALSE	canonical	3	25	junction_1	6.64997911442	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAACAAAA	9138	False	NA	NA	False	AAAACA	-19	NA	38870099	38868981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_38869167_38869246_38869411_38869572_38869705_38869942
transcript_70718.known	chr19	-	346	3	FSM	ENSG00000187994.14	ENST00000593809.1	346	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGACGCTGCACAGAAAGG	9316	False	NA	NA	False	GGGGCT	-43	NA	38869921	38869283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38869411_38869572_38869705_38869834
transcript_70719.known	chr19	-	1810	3	FSM	ENSG00000187994.14	ENST00000593424.5	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTGTATGTTTGTGT	16	True	NA	-7	True	ATTAAA	-18	NA	38870043	38867833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38869411_38869572_38869705_38869942
transcript_70724.known	chr19	-	1862	16	FSM	ENSG00000068903.21	ENST00000249396.12	1862	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	20.862938964159	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTCTGGCCTCCTGTTT	0	True	NA	-4	True	ATTAAA	-19	NA	38899618	38878559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38898378_38898426_38899505
transcript_70726.known	chr19	-	2062	15	FSM	ENSG00000068903.21	ENST00000392081.6	2062	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	8.21676981072544	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTCCTGTTTCTT	NA	False	NA	-1	True	ATTAAA	-22	NA	38899862	38878556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38899505
transcript_70731.known	chr19	+	1192	6	FSM	ENSG00000104825.17	ENST00000313582.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	84.336468979914	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	-8	True	NA	16	True	AATAAA	-21	NA	38899968	38908889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_70736.known	chr19	-	1630	17	FSM	ENSG00000104835.15	ENST00000600042.5	1630	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	131.045063217773	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCAGGAGACCCCGGAC	-8	True	NA	NA	False	NA	NA	NA	38930761	38915563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921597_38922001_38922079_38922237_38922268_38926204_38926301_38930469
transcript_70738.known	chr19	-	1886	16	FSM	ENSG00000104835.15	ENST00000430193.7	1886	16	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_5	83.5231438318479	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAAAGTCCCCAATAAA	-5	True	NA	-37	True	NA	NA	NA	38930758	38915298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917828_38917914_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_70753.known	chr19	-	2218	6	FSM	ENSG00000269190.6	ENST00000292852.9	2218	6	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_2	9.21737489744233	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTGTATGTGTCTT	-23	True	NA	-2	True	NA	NA	NA	38975742	38941400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38942752_38944968_38945105_38946471_38946568_38948566_38948679_38949970_38950337_38975585
transcript_7076.nic	chr1	-	1256	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-163	25181	89	470	5prime_fragment	FALSE	canonical	3	83	junction_2	55.5	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGAAAAATGGATGTAAGCA	652	False	NA	NA	False	GATAAA	-42	NA	91021636	90940478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_70762.known	chr19	-	1022	3	FSM	ENSG00000104835.15	ENST00000598598.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	9	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGAGATCCGGAAGGAGC	-10	True	NA	NA	False	NA	NA	NA	38930763	38921635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38922268_38926204_38926301_38930469
transcript_70765.known	chr19	+	1220	2	FSM	ENSG00000128626.12	ENST00000407800.2	1220	2	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_1	0	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCACGGAGGGCTCTTTT	-1	True	NA	20	True	ATTAAA	-22	NA	38930953	38933162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38931344_38932332
transcript_70766.known	chr19	+	929	3	FSM	ENSG00000128626.12	ENST00000402029.3	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	250.5	3736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTGGAGTATTTGC	44	False	NA	26	True	AATAAA	-26	NA	38930998	38933020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38931172_38931275_38931344_38932332
transcript_70767.known	chr19	+	959	3	FSM	ENSG00000128626.12	ENST00000308018.9	959	3	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	188.5	3275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCTCTTTTTTTTTT	-11	True	NA	26	True	ATTAAA	-28	NA	38930943	38933168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38930999_38931275_38931344_38932332
transcript_70770.known	chr19	+	2739	9	FSM	ENSG00000130669.17	ENST00000358301.7	2739	9	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_1	109.093709717838	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	10	True	NA	14	True	ATTAAA	-15	NA	39125801	39179402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39125920_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_70775.nnic	chr19	-	667	7	NNC	ENSG00000130755.13	novel	614	7	NA	NA	739	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.37436854187255	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCAGTTTGGACTCAG	320	False	NA	-7	True	AATAAA	-23	NA	39341633	39328358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335260_39335311_39335434_39335532_39341510
transcript_70776.known	chr19	-	490	5	FSM	ENSG00000130755.13	ENST00000596583.5	490	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCAGTTTGGACTCAG	6422	False	NA	-7	True	AATAAA	-23	NA	39335531	39328358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39328549_39328999_39329074_39329547_39329627_39333076_39333127_39335434
transcript_70777.nnic	chr19	-	674	5	Fusion	ENSG00000130755.13_ENSG00000269246.1	novel	526	6	NA	NA	158	0	multi-exon	FALSE	canonical	1	2	junction_4	1.08972473588517	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCAGTTTGGACTCAG	166	False	NA	-7	True	AATAAA	-23	NA	39341787	39328358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39341510
transcript_7078.known	chr1	-	514	3	FSM	ENSG00000122482.22	ENST00000498303.5	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	33	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTAACCACTGGACA	-4	True	NA	NA	False	AATAAA	-7	NA	91022081	90940948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90941310_90982309_90982371_91021989
transcript_70780.known	chr19	-	173	1	FSM	ENSG00000269246.1	ENST00000599274.1	173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGATCTGTGCG	8	True	NA	-1	True	AATAAA	-19	NA	39341945	39341772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39341800_39341900
transcript_70781.known	chr19	-	614	7	FSM	ENSG00000130755.13	ENST00000597595.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.37436854187255	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCAGTTTGGACTCAG	-4	True	NA	-7	True	AATAAA	-23	NA	39336043	39328358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335260_39335311_39335434_39335532_39335973
transcript_70782.known	chr19	-	423	5	FSM	ENSG00000130755.13	ENST00000602185.5	423	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.78535710713571	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGATCCTCAGTTTGG	34	True	NA	-13	True	AATAAA	-17	NA	39336005	39328364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335973
transcript_70784.known	chr19	-	2200	14	FSM	ENSG00000006712.15	ENST00000221265.8	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	12.8099443619484	1367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCTCCAACAGCGA	-25	True	NA	NA	False	ATTAAA	-20	NA	39391106	39385628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39386404_39386481_39386573_39386693_39386800_39388338_39388468_39388559_39388677_39388761_39388866_39388946_39389016_39389092_39389199_39389281_39389384_39389479_39389547_39389639_39389762_39390068_39390162_39390259_39390290_39390817
transcript_70789.known	chr19	+	578	1	FSM	ENSG00000179134.16	ENST00000596271.1	578	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGACCTTCGTTGTGC	NA	False	NA	7	True	AAAACA	-14	NA	39385120	39385698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39385100_39385700
transcript_7079.known	chr1	-	820	2	FSM	ENSG00000122482.22	ENST00000495966.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTGCAATTATATCATA	233	False	NA	NA	False	ATTAAA	-3	NA	91022055	91020447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_91021202_91021989
transcript_70791.known	chr19	+	3590	4	FSM	ENSG00000063322.15	ENST00000315588.11	3590	4	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	18.8030730348939	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTCTTGTTTATAT	-20	True	NA	93	True	ATTAAA	-15	NA	39391377	39400641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39391639_39392463_39392523_39393552_39393638_39397456
transcript_70792.known	chr19	+	1471	4	FSM	ENSG00000063322.15	ENST00000594368.5	1471	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	239.472104615316	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTGGGGAGGGGGCTTC	-5	True	NA	NA	False	NA	NA	NA	39391392	39398607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39391639_39392463_39392523_39393552_39393638_39397526
transcript_70796.known	chr19	+	2941	3	FSM	ENSG00000063322.15	ENST00000599417.2	2941	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	254	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAAGGCCTGTATTT	505	False	NA	-61	True	NA	NA	NA	39391302	39399976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39391639_39393552_39393638_39397456
transcript_70798.known	chr19	+	636	4	FSM	ENSG00000063322.15	ENST00000596297.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	239.472104615316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGGGACAGGGAGTGG	14	True	NA	-72	True	NA	NA	NA	39391411	39397698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39391639_39392463_39392523_39393552_39393661_39397456
transcript_70799.known	chr19	+	1747	2	FSM	ENSG00000128016.7	ENST00000597629.3	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGATCCTGGCTTCTTC	1	True	NA	10	True	AATAAA	-15	NA	39406846	39409407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39406929_39407742
transcript_708.known	chr1	+	637	2	FSM	ENSG00000187608.10	ENST00000649529.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	833	junction_1	0	3661	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCGCCTCTGTGTCTGTG	1	True	NA	9	True	AATAAA	-19	NA	1013496	1014540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1013577_1013983
transcript_7080.known	chr1	-	710	2	FSM	ENSG00000122482.22	ENST00000482467.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGCATAAAGCTTGATT	563	False	NA	NA	False	NA	NA	NA	91021725	91020528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_91021202_91021688
transcript_70800.known	chr19	+	1699	2	FSM	ENSG00000128016.7	ENST00000652583.1	1699	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTGGGCATTTTTAA	12	False	NA	27	True	AATATA	-38	NA	39406857	39409368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39406933_39407744
transcript_70816.known	chr19	-	631	5	FSM	ENSG00000105193.9	ENST00000251453.8	631	5	0	0	0	0	multi-exon	TRUE	canonical	3	6641	junction_1	122.418340129247	94131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTCTGGATTTTGACC	-5	True	NA	-26	True	AGTAAA	-15	NA	39435949	39433136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435606_39435709_39435847
transcript_70817.known	chr19	-	492	5	FSM	ENSG00000105193.9	ENST00000601655.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_3	2774.82026444957	9766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	3	True	NA	-33	True	AATAAA	-22	NA	39435941	39433216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435657_39435709_39435847
transcript_70818.known	chr19	-	555	5	FSM	ENSG00000105193.9	ENST00000599539.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2983.88164770321	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	0	True	NA	-23	True	AATAAA	-32	NA	39435915	39433206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433493_39433570_39433664_39433762_39435606_39435709_39435847
transcript_70819.known	chr19	-	2389	4	FSM	ENSG00000105193.9	ENST00000601390.1	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	6641	junction_1	95.374117150421	2352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTTTCAAGAACTGT	-4	True	NA	-39	True	AATAAA	-16	NA	39435948	39433222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39435709_39435847
transcript_70820.known	chr19	-	643	4	FSM	ENSG00000105193.9	ENST00000339471.8	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6641	junction_1	140.330562126241	2479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	8	True	NA	-23	True	AATAAA	-32	NA	39435936	39433206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433521_39433762_39435606_39435709_39435847
transcript_70821.known	chr19	-	407	4	FSM	ENSG00000105193.9	ENST00000599705.1	407	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	3259.96526907198	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTCACTTGTATAATA	9782	False	NA	-76	True	NA	NA	NA	39435705	39433259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433517_39433570_39433664_39433762_39435606
transcript_70822.known	chr19	+	3678	30	FSM	ENSG00000196235.14	ENST00000432763.7	3678	30	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	91.2081806832227	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-12	True	NA	21	True	AATAAA	-22	NA	39445581	39476670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_70824.known	chr19	+	3698	29	FSM	ENSG00000196235.14	ENST00000402194.6	3698	29	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_4	132.974218768688	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGCGTGTGTGTGTGT	9355	False	NA	17	True	AATAAA	-18	NA	39445545	39476666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_70825.known	chr19	+	3742	29	FSM	ENSG00000196235.14	ENST00000598725.5	3742	29	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_4	82.6586909143465	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-3	True	NA	21	True	AATAAA	-22	NA	39445683	39476670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_70826.known	chr19	+	3770	28	FSM	ENSG00000196235.14	ENST00000359191.10	3770	28	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	129.132953253274	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	-6	True	NA	21	True	AATAAA	-22	NA	39445643	39476670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_7086.nic	chr1	-	913	2	ISM	ENSG00000162669.16	ENST00000427444.1	672	4	-245	14871	-229	-6312	5prime_fragment	FALSE	canonical	2	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTCTTGCCTATTTG	NA	False	NA	NA	False	AAGAAA	-10	NA	91405085	91400484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_91401110_91404797
transcript_70876.known	chr19	+	786	4	FSM	ENSG00000105197.11	ENST00000599794.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	548.654313348173	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTCCCTCTGACCA	-4	True	NA	-13	True	NA	NA	NA	39480840	39490119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39480962_39488060_39488218_39488538_39488646_39489718
transcript_70877.known	chr19	+	2274	1	FSM	ENSG00000105197.11	ENST00000595527.2	2274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	22	True	AATAAA	-22	NA	39491511	39493785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39491500_39493800
transcript_70878.known	chr19	+	2004	9	FSM	ENSG00000090932.11	ENST00000356433.10	2004	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	25.406692031825	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTGACTAACGAGGCTGA	-3	True	NA	18	True	TATAAA	-18	NA	39498946	39508469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829_39507915_39508251
transcript_70880.known	chr19	+	2332	8	FSM	ENSG00000090932.11	ENST00000205143.4	2332	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	23.430313524081	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGAATGCTTTGTATT	18	False	NA	30	True	TATAAA	-30	NA	39498967	39508481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39499044_39499191_39499474_39500614_39500673_39502814_39503058_39504070_39504289_39505228_39505452_39507038_39507619_39507829
transcript_70881.known	chr19	+	1704	6	FSM	ENSG00000186838.14	ENST00000335426.8	1704	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.63560112144215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTGGTCCCAGCTAT	1445	False	NA	20	True	AATAAA	-24	NA	39515112	39520686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39516022_39518607_39518633_39518739_39518794_39518902_39518978_39519070_39519171_39520145
transcript_70883.known	chr19	+	481	4	FSM	ENSG00000186838.14	ENST00000600586.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	14.3836326735943	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTGTCCAGTCTGACT	391	False	NA	2	True	AATACA	-14	NA	39515813	39520264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39516022_39518739_39518794_39519070_39519171_39520145
transcript_70888.nic	chr19	+	466	2	ISM	ENSG00000186838.14	ENST00000600586.1	481	4	3010	0	3010	0	3prime_fragment	FALSE	canonical	3	23	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTGTCCAGTCTGACT	3401	False	NA	2	True	AATACA	-14	NA	39518823	39520264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_39519171_39520145
transcript_70889.nic	chr19	+	701	2	ISM	ENSG00000186838.14	ENST00000600586.1	481	4	3197	-422	3197	0	3prime_fragment	FALSE	canonical	3	23	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTGGTCCCAGCTAT	3588	False	NA	20	True	AATAAA	-24	NA	39519010	39520686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_39519171_39520145
transcript_70890.known	chr19	-	281	2	FSM	ENSG00000176401.6	ENST00000601837.1	281	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGTGGTGGCACGCGC	-10	True	NA	NA	False	AATAAA	-8	NA	39532843	39531336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39531514_39532739
transcript_70891.nnic	chr19	-	1026	2	Genic_Genomic	ENSG00000176396.11	novel	1455	1	NA	NA	-101	-99	multi-exon	FALSE	canonical	2	27	junction_1	0	748	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGACTTTTTTCTTTC	NA	False	NA	-28	True	AGTAAA	-43	NA	39540262	39538805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_39539571_39540001
transcript_70892.known	chr19	+	600	4	FSM	ENSG00000105198.12	ENST00000221797.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGATTTGGTTCTTGCTTT	1	True	NA	NA	False	ATTAAA	-17	NA	39602523	39607474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39602584_39604601_39604679_39605177_39605389_39607222
transcript_70894.known	chr19	+	599	4	FSM	ENSG00000006659.13	ENST00000392052.8	599	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATGATTGGTTCTTGC	4	True	NA	NA	False	ATTAAA	-13	NA	39704480	39709444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39704544_39706596_39706674_39707177_39707389_39709196
transcript_70895.known	chr19	+	469	3	FSM	ENSG00000006659.13	ENST00000601802.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACACTTGATCATTAAA	25	False	NA	NA	False	NA	NA	NA	39704501	39709412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39704544_39707177_39707389_39709196
transcript_70899.nnic	chr19	-	834	5	NNC	ENSG00000105205.7	novel	631	4	NA	NA	-531	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	4.06201920231798	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTGGTTCTTGCTTT	NA	False	NA	-3	True	ATTAAA	-17	NA	39738560	39731254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_39731506_39734282_39734494_39734996_39735074_39737937_39738014_39738341
transcript_7090.known	chr1	+	3215	12	FSM	ENSG00000097046.13	ENST00000234626.11	3215	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	36.7499929723949	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-12	True	NA	20	True	AATAAA	-22	NA	91500850	91525764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_70901.known	chr19	-	631	4	FSM	ENSG00000105205.7	ENST00000221804.5	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	3.29983164553722	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATTTGGTTCTTGCTTT	-4	True	NA	-3	True	ATTAAA	-17	NA	39738029	39731254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39731506_39734282_39734494_39734996_39735074_39737937
transcript_70903.known	chr19	-	2007	11	FSM	ENSG00000105204.14	ENST00000430012.6	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	28.2460616723819	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCCCCCTCCCTGGGGC	-7	True	NA	NA	False	NA	NA	NA	39834158	39825714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39826087_39826179_39826287_39826671_39826868_39827284_39827426_39827509_39827657_39828296_39828584_39829879_39830028_39830374_39830564_39830663_39830784_39831804_39831969_39834022
transcript_70905.known	chr19	-	772	4	FSM	ENSG00000105204.14	ENST00000601972.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	16.779617264871	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCGTTATGTTATTTC	-1	True	NA	NA	False	TTTAAA	-16	NA	39834152	39830205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39830564_39830663_39830784_39831804_39831969_39834022
transcript_70914.known	chr19	-	1125	9	FSM	ENSG00000105202.9	ENST00000221801.8	1125	9	0	0	0	0	multi-exon	FALSE	canonical	3	1948	junction_7	265.37049572249	22624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	-19	True	NA	-7	True	ATTAAA	-14	NA	39846379	39834457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
transcript_70915.known	chr19	-	603	5	FSM	ENSG00000105202.9	ENST00000594309.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	908.640020855344	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGTAGATGGAGAG	3	True	NA	NA	False	NA	NA	NA	39846357	39839034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39839206_39840232_39840328_39840413_39840516_39840619_39840788_39846290
transcript_70916.known	chr19	-	896	6	FSM	ENSG00000105202.9	ENST00000595545.5	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	2519	junction_5	79.5401785263272	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	5919	False	NA	-7	True	ATTAAA	-14	NA	39840441	39834457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413
transcript_70917.known	chr19	-	12787	28	FSM	ENSG00000275395.7	ENST00000616721.6	12787	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	5.22340412157474	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTGTCTGTCTCAT	9489	False	NA	1	True	AATAAA	-20	NA	39934626	39863322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39863497_39863620_39863893_39866736_39867121_39870215_39870416_39872077_39872652_39873223_39873796_39875387_39875932_39876657_39877275_39877662_39878237_39879554_39879893_39883304_39883447_39885672_39885873_39885990_39886586_39889478_39890072_39891642_39892187_39892910_39893528_39893921_39894496_39895805_39896144_39899555_39899698_39901924_39902125_39902242_39902838_39905730_39906324_39913689_39914258_39915184_39915790_39918071_39918643_39924382_39924733_39927058_39928307_39934563
transcript_70920.known	chr19	+	1754	11	FSM	ENSG00000013275.8	ENST00000157812.7	1754	11	0	0	0	0	multi-exon	TRUE	canonical	3	777	junction_6	111.310556552377	7310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGATGGATATGTTC	-16	True	NA	NA	False	NA	NA	NA	39971164	39981764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_70924.known	chr19	+	1333	11	FSM	ENSG00000013275.8	ENST00000455878.2	1333	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	307.832178304998	9558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	-11	True	NA	54	True	AATAAA	-19	NA	39971169	39981441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39971239_39972145_39972245_39972461_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_70925.known	chr19	+	1623	10	FSM	ENSG00000013275.8	ENST00000601697.5	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_6	109.439763013244	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	-1	True	NA	54	True	AATAAA	-19	NA	39971179	39981441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980718_39981191
transcript_70926.known	chr19	+	1532	10	FSM	ENSG00000013275.8	ENST00000593455.5	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_6	116.743255284068	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTCTTCAATAAATAGAT	-11	True	NA	21	True	NA	NA	NA	39971169	39981408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980455_39980661_39980718_39981191
transcript_70929.known	chr19	+	3426	7	FSM	ENSG00000187187.14	ENST00000600094.5	3426	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.13437474581095	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAATGAAAAGAAAAAA	7	True	NA	NA	False	AATAAA	-18	NA	39997062	40016545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39997158_39997860_39997916_39998247_39998333_40006095_40006183_40007273_40007401_40008469_40008566_40013664
transcript_7093.nnic	chr1	+	3181	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	82.2698643399416	383	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	0	True	NA	20	True	AATAAA	-22	NA	91500813	91525764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_91500878_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_70939.known	chr19	-	498	6	FSM	ENSG00000197782.15	ENST00000599972.1	498	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.1445319773866	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATACCTCTGAAGTAA	74	False	NA	-63	True	NA	NA	NA	40090860	40076169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090749
transcript_70940.known	chr19	-	3472	6	FSM	ENSG00000197782.15	ENST00000595687.6	3472	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	27.1587923148287	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGCACGTTTATTT	12	True	NA	72	True	AATATA	-35	NA	40090888	40073179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090793
transcript_70941.known	chr19	-	467	6	FSM	ENSG00000197782.15	ENST00000601688.5	467	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	24.2454119371068	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACAACTCTTGGCATT	-4	True	NA	-16	True	AGTAAA	-27	NA	40090938	40076122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090905
transcript_70943.known	chr19	-	8687	5	FSM	ENSG00000128000.17	ENST00000434248.6	8687	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	16.2076370887307	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAACCTTGCCATTTGAG	-31	True	NA	NA	False	AATAAA	-20	NA	40056231	40028259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40036627_40047374_40047471_40048669_40048797_40050323_40050378_40056188
transcript_70944.known	chr19	-	401	5	FSM	ENSG00000128000.17	ENST00000598845.5	401	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	16.4981059518964	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCCTCGAGGCCTTT	44	False	NA	NA	False	AATAAA	-36	NA	40056156	40036530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40036627_40047405_40047474_40048669_40048797_40050323_40050378_40056100
transcript_70945.nic	chr19	-	385	5	NIC	ENSG00000128000.17	novel	8687	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	15.9843673631458	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCCTCGAGGCCTTT	-31	True	NA	NA	False	AATAAA	-36	NA	40056231	40036530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_40036627_40047405_40047471_40048669_40048797_40050323_40050378_40056188
transcript_70946.known	chr19	-	546	5	FSM	ENSG00000197782.15	ENST00000595773.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	32.6678358634299	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTTGCAATACACATAA	-4	True	NA	NA	False	NA	NA	NA	40090938	40075973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090905
transcript_70949.known	chr19	-	446	5	FSM	ENSG00000197782.15	ENST00000601715.5	446	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	26.9385875650525	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	699	False	NA	-7	True	AGTAAA	-36	NA	40090235	40076113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165
transcript_70950.nic	chr19	-	567	2	ISM	ENSG00000174521.8	ENST00000311308.7	828	3	846	0	844	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGGTGTTCTTGGGG	9151	False	NA	2	True	AAAACA	-21	NA	40217538	40216057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_40216273_40217186
transcript_70951.known	chr19	-	5250	14	FSM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_13	15.4862030597271	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGTGCTTTTGTTT	-12	True	NA	-5	True	AATAAA	-18	NA	40285345	40230316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
transcript_70952.known	chr19	-	1795	13	FSM	ENSG00000105221.18	ENST00000391844.8	1795	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	25.7158619446356	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTCGCATTTGGAAG	57	False	NA	NA	False	NA	NA	NA	40285373	40233669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40285180
transcript_70955.nic	chr19	-	1253	6	ISM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	11190	0	452	5prime_fragment	FALSE	canonical	3	82	junction_5	16.0872620417522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATTACGGACCCCCAT	-12	True	NA	NA	False	AAAAAG	-5	NA	40285345	40241506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
transcript_70957.known	chr19	+	1906	13	FSM	ENSG00000105223.20	ENST00000356508.9	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	692.266206021932	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	14	True	NA	14	True	AGTAAA	-14	NA	40348699	40378483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40348725_40365552_40365586_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_70959.known	chr19	+	2137	13	FSM	ENSG00000105223.20	ENST00000409735.9	2137	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	491.042845777116	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCCTGACTGAGTGG	9	True	NA	16	True	AGTAAA	-16	NA	40348694	40378485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40348769_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_70964.known	chr19	+	1966	12	FSM	ENSG00000105223.20	ENST00000409419.5	1966	12	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	560.035108108456	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	-8	True	NA	6	True	AGTAAA	-6	NA	40348677	40378475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40348769_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_70974.known	chr19	-	2126	9	FSM	ENSG00000160392.14	ENST00000392035.6	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	32.3950227658509	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCCCCACTCCTTCA	3	True	NA	-16	True	AATATA	-18	NA	40348386	40321062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341785_40341891_40348323
transcript_70975.known	chr19	-	3611	9	FSM	ENSG00000160392.14	ENST00000683109.1	3611	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	14.7938965455353	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	-8	True	NA	NA	False	NA	NA	NA	40348397	40319535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348323
transcript_70976.known	chr19	-	3628	9	FSM	ENSG00000160392.14	ENST00000582783.5	3628	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	36.1954330682753	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	1	True	NA	NA	False	NA	NA	NA	40348527	40319535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348436
transcript_70985.known	chr19	+	2180	13	FSM	ENSG00000105223.20	ENST00000409587.5	2180	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	675.155640492538	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	-1	True	NA	14	True	AGTAAA	-14	NA	40348684	40378483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40348769_40365717_40365931_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_70986.known	chr19	+	503	5	FSM	ENSG00000105223.20	ENST00000602131.5	503	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	824.718285234419	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATCGCCTCCTTCTACT	4	True	NA	NA	False	NA	NA	NA	40348689	40367809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40348769_40366418_40366511_40366609_40366685_40366772_40366916_40367695
transcript_70987.known	chr19	+	694	4	FSM	ENSG00000105223.20	ENST00000493006.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	1676	junction_1	205.739317260135	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAGAAAAGAAAA	30	True	NA	NA	False	AATACA	-18	NA	40365894	40367263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40365931_40366418_40366511_40366609_40366685_40366772
transcript_70990.nic	chr19	-	803	5	NIC	ENSG00000105227.16	novel	475	3	NA	NA	-39	20	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	7.39932429347437	370	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTGTCTAAACACACAC	8424	False	NA	NA	False	AATAAA	-28	NA	40413417	40407265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_40407720_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_70992.nic	chr19	-	985	4	ISM	ENSG00000105227.16	ENST00000324001.8	4867	7	-39	13502	-39	16	5prime_fragment	FALSE	canonical	3	31	junction_3	3.77123616632825	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACCCTGTCTAAACAC	8424	False	NA	NA	False	AATAAA	-24	NA	40413417	40407269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_40408032_40408157_40408257_40408339_40408384_40413337
transcript_70996.known	chr19	-	2084	2	FSM	ENSG00000197019.5	ENST00000357949.5	2084	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	560	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGGCAAAGGATAGGG	0	True	NA	NA	False	AATAAA	-20	NA	40425992	40421588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40423547_40425866
transcript_70997.known	chr19	+	588	1	FSM	ENSG00000277453.1	ENST00000614440.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATCTTCAGAGTGGG	NA	False	NA	NA	False	ATTAAA	-9	NA	40426114	40426702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40426100_40426700
transcript_71.known	ERCC-00165	+	856	1	FSM	ERCC-00165A	DQ668363	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	316	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00165_+_0_900
transcript_710.known	chr1	+	1043	5	FSM	ENSG00000217801.11	ENST00000394517.7	1043	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.20156211871642	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCGGCACCTAGGT	4	True	NA	24	True	NA	NA	NA	1059707	1066459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1061019_1061118_1063078_1063202_1065829
transcript_71001.known	chr19	-	747	2	FSM	ENSG00000167565.13	ENST00000599706.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTTGGGAGTGGAATG	249	False	NA	NA	False	NA	NA	NA	40444062	40441547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40442087_40443854
transcript_71002.known	chr19	-	1364	2	FSM	ENSG00000167565.13	ENST00000322354.4	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGTCTAATGTTTCT	-24	True	NA	-1	True	AATAAA	-17	NA	40444335	40440843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40442087_40444214
transcript_71003.known	chr19	-	1515	2	FSM	ENSG00000167565.13	ENST00000392028.8	1515	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGTCTAATGTTTCT	1713	False	NA	-1	True	AATAAA	-17	NA	40442598	40440843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40442087_40442326
transcript_71007.known	chr19	-	767	5	FSM	ENSG00000090013.11	ENST00000643596.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	221.456965345414	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACCGACTGTGTGACT	453	False	NA	-11	True	AATAAA	-30	NA	40465759	40447794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40448047_40451363_40451493_40458173_40458245_40458380_40458546_40465609
transcript_71008.known	chr19	-	649	4	FSM	ENSG00000090013.11	ENST00000595483.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	207.012613679027	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTGTGTGACTCTTCCT	1	True	NA	-5	True	AATAAA	-36	NA	40465745	40447788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40448047_40458154_40458245_40458380_40458546_40465609
transcript_71011.known	chr19	+	525	4	FSM	ENSG00000160460.17	ENST00000599926.5	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	4.32049379893857	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAACACTGAGGACGC	NA	False	NA	NA	False	NA	NA	NA	40571038	40575663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40571094_40572018_40572193_40572337_40572381_40575410
transcript_71012.known	chr19	+	712	4	FSM	ENSG00000160460.17	ENST00000593816.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.16496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCGCACTGTGGGC	NA	False	NA	NA	False	NA	NA	NA	40571045	40575605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40571094_40572018_40572193_40572337_40572633_40575410
transcript_71020.known	chr19	+	2341	18	FSM	ENSG00000160410.15	ENST00000291842.10	2341	18	0	0	0	0	multi-exon	TRUE	canonical	3	525	junction_11	41.2480050896456	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	0	True	NA	20	True	AATAAA	-15	NA	40576872	40591397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_71032.known	chr19	+	1019	6	FSM	ENSG00000160410.15	ENST00000597396.5	1019	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	221.080075990579	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAACATCTTGCTTATTCT	30	False	NA	15	True	AATAAA	-10	NA	40586895	40591392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590732_40590854_40590975
transcript_71033.known	chr19	+	572	4	FSM	ENSG00000160410.15	ENST00000599716.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	39.8859485143439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCGATTTCTCCCTA	14	True	NA	NA	False	NA	NA	NA	40576886	40577929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556
transcript_71034.known	chr19	+	2339	16	FSM	ENSG00000160410.15	ENST00000594973.5	2339	16	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_9	40.9029202978087	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGCTTATTCTTAG	49	False	NA	18	True	AATAAA	-13	NA	40577228	40591395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_71035.known	chr19	+	1993	16	FSM	ENSG00000160410.15	ENST00000600718.5	1993	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	154.765715410961	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCCCCAATAAAGTCCT	16	False	NA	-9	True	NA	NA	NA	40576915	40591368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40590729_40590854_40590975
transcript_71037.known	chr19	+	814	4	FSM	ENSG00000090006.18	ENST00000595529.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	7.11805216802087	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCATTGATGGG	896	False	NA	NA	False	NA	NA	NA	40606465	40608921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40606527_40607364_40607530_40608219_40608370_40608483
transcript_71038.nnic	chr19	+	749	3	NIC	ENSG00000090006.18	novel	814	4	NA	NA	-100	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	38.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCATTGATGGG	796	False	NA	NA	False	NA	NA	NA	40606365	40608921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_40606527_40608219_40608370_40608483
transcript_71039.known	chr19	-	3561	10	FSM	ENSG00000105245.9	ENST00000252891.8	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	13.5710294195456	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGGTTGATTTTGTGC	-5	True	NA	-2	True	TATAAA	-27	NA	40690651	40665904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40668139_40669897_40670021_40673343_40673650_40677231_40677422_40680916_40681058_40682727_40682803_40682893_40682969_40684416_40684557_40686910_40686996_40690459
transcript_71040.known	chr19	-	2297	16	FSM	ENSG00000123815.13	ENST00000677018.1	2297	16	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_15	58.8304531872926	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	4	True	NA	11	True	AATAAA	-33	NA	40716882	40691513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
transcript_71042.known	chr19	-	2237	15	FSM	ENSG00000123815.13	ENST00000678419.1	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	53.2050327525891	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1896	False	NA	11	True	AATAAA	-33	NA	40714990	40691513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_71043.known	chr19	-	2201	15	FSM	ENSG00000123815.13	ENST00000601967.6	2201	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	53.6931949475301	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-10	True	NA	11	True	AATAAA	-33	NA	40715098	40691513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715056
transcript_71044.known	chr19	-	2305	15	FSM	ENSG00000123815.13	ENST00000679130.1	2305	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	56.8778228723101	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1034	False	NA	11	True	AATAAA	-33	NA	40715852	40691513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715706
transcript_71046.known	chr19	-	2443	15	FSM	ENSG00000123815.13	ENST00000324464.8	2443	15	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_14	41.9190789936214	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	0	True	NA	-5	True	AATAAA	-17	NA	40716886	40691529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_71047.known	chr19	-	2194	15	FSM	ENSG00000123815.13	ENST00000594720.6	2194	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_14	47.631932780522	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-10	True	NA	11	True	AATAAA	-33	NA	40716896	40691513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_71050.known	chr19	-	2041	14	FSM	ENSG00000123815.13	ENST00000243583.10	2041	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	79.3898328637249	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	15	True	NA	-5	True	AATAAA	-17	NA	40715073	40691529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715052
transcript_7106.nic	chr1	+	1025	7	ISM	ENSG00000097046.13	ENST00000234626.11	3215	12	-43	12458	-43	1483	5prime_fragment	TRUE	canonical	3	240	junction_1	44.748991298377	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTATCTCTTTTATTTC	NA	False	NA	34	True	ATTAAA	-18	NA	91500807	91513306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057
transcript_71071.known	chr19	-	1792	9	FSM	ENSG00000188493.15	ENST00000469741.6	1792	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.9713427605921	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	6815	False	NA	-4	True	AATAAA	-19	NA	40750553	40740855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40741440_40741693_40741865_40742514_40742771_40743914_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_71076.known	chr19	+	3376	7	FSM	ENSG00000086544.3	ENST00000263370.3	3376	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	9.8784276751583	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGTAGAGCTTTTTATTT	-11	True	NA	17	True	AATAAA	-19	NA	40717111	40740860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40718291_40725339_40725440_40729201_40729416_40733159_40733365_40736985_40737088_40737697_40737770_40739356
transcript_71101.known	chr19	-	553	6	FSM	ENSG00000188493.15	ENST00000598485.6	553	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.8635879972083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTCTGAATGTTCTGT	7066	False	NA	-10	True	AATAAA	-13	NA	40750302	40740861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40741009_40743914_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_71104.known	chr19	-	3302	6	FSM	ENSG00000188493.15	ENST00000378313.7	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	15.1340675299141	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-9	True	NA	-9	True	AATAAA	-14	NA	40750477	40740860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
transcript_71105.known	chr19	-	2521	6	FSM	ENSG00000188493.15	ENST00000470681.5	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	25.4605577315188	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTCTGTTTATTG	-24	True	NA	-4	True	AATAAA	-19	NA	40750492	40740855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40742771_40743904_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_71109.known	chr19	-	2822	5	FSM	ENSG00000123815.13	ENST00000676651.1	2822	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	81.5276026876787	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAAAAATTAGCTGGA	0	True	NA	NA	False	ACTAAA	-1	NA	40716886	40707631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_71111.known	chr19	-	492	5	FSM	ENSG00000188493.15	ENST00000596940.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.9639804629669	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	7815	False	NA	-9	True	AATAAA	-14	NA	40749553	40740860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40741009_40743904_40743982_40744558_40744684_40745129_40745199_40749480
transcript_7112.known	chr1	+	3313	12	FSM	ENSG00000097046.13	ENST00000428239.5	3313	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	92.5314331224935	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	-23	True	NA	20	True	AATAAA	-22	NA	91501107	91525764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_91501304_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_71128.known	chr19	+	1277	6	FSM	ENSG00000077312.9	ENST00000243563.8	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_5	50.9768574943572	6054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	3	True	NA	37	True	ATTAAA	-30	NA	40751202	40765389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_71129.known	chr19	-	2451	15	FSM	ENSG00000123815.13	ENST00000678404.1	2451	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	58.1075709001707	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	1270	False	NA	11	True	AATAAA	-33	NA	40715616	40691513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715324
transcript_71130.known	chr19	+	538	5	FSM	ENSG00000077312.9	ENST00000597353.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	703.503864594929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGCCCCGCATTATGCACC	-22	True	NA	NA	False	NA	NA	NA	40750867	40762920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40750938_40751386_40751482_40757331_40757505_40759430_40759611_40762900
transcript_71131.known	chr19	-	2270	15	FSM	ENSG00000123815.13	ENST00000678316.1	2270	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.4838227024123	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	164	False	NA	11	True	AATAAA	-33	NA	40716722	40691513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705349_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_71134.known	chr19	+	1173	8	FSM	ENSG00000167578.18	ENST00000594800.5	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	95.8627845902035	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGACTGTAGCAGATCC	21	False	NA	NA	False	AATATA	-18	NA	40778215	40792572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40792216
transcript_71135.known	chr19	+	1159	8	FSM	ENSG00000167578.18	ENST00000357052.8	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	18.8127182338688	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGCCTCCATTATTG	-22	True	NA	10	True	CATAAA	-17	NA	40778246	40796942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
transcript_71147.known	chr19	+	2100	6	FSM	ENSG00000269858.6	ENST00000303961.9	2100	6	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_1	75.5989417915357	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCCATCTGCAAT	-18	True	NA	20	True	AATAAA	-22	NA	40799190	40808434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40799263_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_71149.known	chr19	+	2150	6	FSM	ENSG00000269858.6	ENST00000406058.6	2150	6	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	418.590778684863	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	-8	True	NA	18	True	AATAAA	-20	NA	40799514	40808432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40799639_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_7115.nnic	chr1	+	1695	9	NNC	ENSG00000137948.19	novel	604	3	NA	NA	-8601	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.53722289127305	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTAATAACAGCAATGAAA	NA	False	NA	NA	False	AATAAA	-39	NA	91940741	91980743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_91941012_91962717_91962947_91964626_91964765_91968145_91968261_91976265_91976439_91977042_91977394_91978167_91978297_91979568_91979758_91980642
transcript_71154.known	chr19	+	488	4	FSM	ENSG00000261857.7	ENST00000263369.4	488	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCGTCTCCGTGGTCTT	-5	True	NA	NA	False	AATACA	-17	NA	40775520	40777490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40775670_40775751_40775886_40776968_40777080_40777396
transcript_71156.nic	chr19	+	752	4	NIC	ENSG00000171570.11	novel	482	4	NA	NA	-6	-3458	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	119.603047155534	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTTGGCCTCCATT	-33	True	NA	6	True	CATAAA	-13	NA	40778235	40796938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_40778392_40786664_40786761_40786847_40786979_40796569
transcript_71159.known	chr19	-	1004	3	FSM	ENSG00000237118.3	ENST00000641827.1	1004	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATGAGAGTCATTTA	318	False	NA	NA	False	ATTAAA	-1	NA	40826471	40818413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40818900_40825119_40825262_40826095
transcript_71161.known	chr19	+	507	5	FSM	ENSG00000261857.7	ENST00000594436.5	507	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCGTCTCCGTGGTCTT	10	True	NA	NA	False	AATACA	-17	NA	40775176	40777490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40775212_40775536_40775670_40775751_40775886_40776968_40777080_40777396
transcript_71167.nic	chr19	+	1630	4	ISM	ENSG00000197838.5	ENST00000330436.4	1760	9	922	2098	922	-2098	internal_fragment	TRUE	canonical	1	2	junction_1	1.24721912892465	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGAATGGCTGATGTCTGT	921	False	NA	3	True	NA	NA	NA	41089372	41094097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_41090197_41090403_41090565_41091731_41091909_41093629
transcript_7117.known	chr1	+	1436	7	FSM	ENSG00000172031.7	ENST00000370383.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.73353657780945	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGTAAGTGCTTCCA	-25	True	NA	NA	False	AATATA	-21	NA	92029984	92063538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92030311_92032504_92032591_92042822_92042981_92045531_92045661_92050316_92050421_92052509_92052659_92063054
transcript_71173.known	chr19	+	306	1	FSM	ENSG00000224476.3	ENST00000496996.1	306	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTCCCCTGCCCTCTC	35	False	NA	NA	False	NA	NA	NA	41169860	41170166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41169900_41170200
transcript_71174.known	chr19	+	2612	9	FSM	ENSG00000167600.14	ENST00000310054.9	2612	9	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_5	107.452024178235	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	7	True	NA	24	True	ATTAAA	-24	NA	41193218	41207539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_71180.known	chr19	+	759	6	FSM	ENSG00000167600.14	ENST00000595590.1	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	925.439657676285	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAAGCGGAGCTCTTCCT	479	False	NA	NA	False	NA	NA	NA	41193721	41206308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41193814_41194543_41194710_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_71186.known	chr19	+	4717	20	FSM	ENSG00000167601.12	ENST00000301178.9	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_9	22.662891435107	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTCCTCTTGTCT	15	True	NA	17	True	CATAAA	-18	NA	41219222	41261766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_71188.known	chr19	+	3206	19	FSM	ENSG00000167601.12	ENST00000359092.7	3206	19	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	13.1656117720877	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTTTTTTTTTTTTT	27	False	NA	19	True	ATTAAA	-19	NA	41219234	41260294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_71189.known	chr19	+	3426	15	FSM	ENSG00000105323.18	ENST00000352456.7	3426	15	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_13	302.034462150481	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAATGTGTTTGCCCTG	237	False	NA	19	True	NA	NA	NA	41262495	41307598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
transcript_71190.known	chr19	+	2794	15	FSM	ENSG00000105323.18	ENST00000595018.5	2794	15	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	228.689969261479	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	-1	True	NA	20	True	NA	NA	NA	41262518	41307019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_71193.known	chr19	+	3043	15	FSM	ENSG00000105323.18	ENST00000595196.5	3043	15	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	288.634399070053	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAGCAAAATGGGG	-3	True	NA	51	True	ATTAAA	-29	NA	41264410	41307050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41264693_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_712.nic	chr1	+	864	4	FSM	ENSG00000217801.11	ENST00000456409.6	957	4	-7	100	-1	5	multi-exon	FALSE	canonical	2	5	junction_1	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGATGGATAATTGTTCA	1232	False	NA	17	True	ATTAAA	-26	NA	1059685	1066356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1063078_1063202_1065829
transcript_7120.known	chr1	+	1412	9	FSM	ENSG00000189195.15	ENST00000342818.4	1412	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.59506743650334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATAGTACTTTCAGT	1	True	NA	NA	False	ATTAAA	-13	NA	92080335	92147840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92080721_92088697_92088896_92102472_92102670_92107883_92108002_92129686_92129777_92139349_92139431_92141114_92141212_92147179_92147269_92147683
transcript_71206.known	chr19	+	3329	5	FSM	ENSG00000142039.4	ENST00000269967.4	3329	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	20.1308221391974	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTATACGTAAATTTG	-39	True	NA	13	True	ATTAAA	-16	NA	41310171	41324873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41310357_41316383_41316840_41319573_41319853_41320340_41320471_41322594
transcript_71215.known	chr19	-	848	5	FSM	ENSG00000123810.9	ENST00000594416.1	848	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.5214154679352	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACGTCACCACCATCCACA	NA	False	NA	NA	False	NA	NA	NA	41364165	41354686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41355014_41357896_41358023_41362982_41363078_41363431_41363524_41363957
transcript_71228.known	chr19	+	757	4	FSM	ENSG00000142046.15	ENST00000604123.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.1696889771861	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	8	True	NA	17	True	ATTAAA	-24	NA	41354168	41384083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41354316_41378280_41378520_41382771_41382922_41383862
transcript_71231.known	chr19	+	650	4	FSM	ENSG00000142046.15	ENST00000413014.6	650	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	31.1376870617513	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	61	False	NA	17	True	ATTAAA	-24	NA	41364055	41384083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41364096_41378280_41378520_41382771_41382922_41383862
transcript_71237.known	chr19	+	1080	4	FSM	ENSG00000142046.15	ENST00000392002.7	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	33.2365260920372	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	13	True	NA	17	True	ATTAAA	-24	NA	41376532	41384083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383714
transcript_71238.known	chr19	+	725	4	FSM	ENSG00000142046.15	ENST00000544232.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.7521042876493	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	1	True	NA	17	True	ATTAAA	-24	NA	41376739	41384083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383862
transcript_71239.known	chr19	+	864	4	FSM	ENSG00000142046.15	ENST00000436170.6	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	25.694789787469	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	10	False	NA	17	True	ATTAAA	-24	NA	41376577	41384083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383885
transcript_7124.known	chr1	+	1616	6	FSM	ENSG00000189195.15	ENST00000370382.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.65329983228432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	AATACA	-14	NA	92080304	92139946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92080721_92088697_92088896_92102472_92102670_92107883_92108002_92129686_92129777_92139349
transcript_71240.known	chr19	-	982	4	FSM	ENSG00000123810.9	ENST00000675972.1	982	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	18.1903515328563	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	209	False	NA	-1	True	AGTAAA	-20	NA	41363930	41354416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363763
transcript_71241.known	chr19	-	1007	4	FSM	ENSG00000123810.9	ENST00000243578.8	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	5.09901951359278	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	-10	True	NA	-1	True	AGTAAA	-20	NA	41364149	41354416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363957
transcript_71249.known	chr19	-	421	3	FSM	ENSG00000123810.9	ENST00000601597.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	10.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGAGCCTGTTTCTT	9	True	NA	0	True	AATAAA	-16	NA	41364092	41361009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41361204_41363431_41363524_41363957
transcript_71252.known	chr19	+	2952	15	FSM	ENSG00000105323.18	ENST00000263367.7	2952	15	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	298.436333072833	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	35	False	NA	20	True	NA	NA	NA	41265121	41307019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41265344_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_71253.known	chr19	-	998	6	FSM	ENSG00000077348.10	ENST00000221233.9	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_4	23.3786227139239	17390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTCTGTTGAGCACCC	4	True	NA	-16	True	AATAAA	-15	NA	41397359	41386373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41392866_41392981_41397180
transcript_71254.known	chr19	-	826	5	FSM	ENSG00000077348.10	ENST00000596905.1	826	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	215.72436116489	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATGGAATGGATGAAT	21	True	NA	-57	True	NA	NA	NA	41397342	41386414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41397180
transcript_71255.known	chr19	+	1742	9	FSM	ENSG00000248098.12	ENST00000269980.7	1742	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_8	27.2921119556549	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	2	True	NA	40	True	AATAAA	-26	NA	41397817	41425002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_71256.known	chr19	+	1960	10	FSM	ENSG00000255730.5	ENST00000540732.3	1960	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	204.420650789336	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTCTGGTCTTTGTTT	18	True	NA	39	True	AATAAA	-25	NA	41376756	41425001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_71257.known	chr19	+	562	2	FSM	ENSG00000248098.12	ENST00000544905.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	NA	False	NA	40	True	AATAAA	-26	NA	41423108	41425002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41423170_41424501
transcript_71258.known	chr19	+	1610	3	FSM	ENSG00000142046.15	ENST00000542945.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGACACCCTTGCAGCC	34	True	NA	-6	True	ATTAAA	-1	NA	41376772	41384060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41382771
transcript_71259.known	chr19	-	716	3	FSM	ENSG00000077348.10	ENST00000593523.2	2272	3	6	1550	0	-1550	multi-exon	FALSE	canonical	3	465	junction_1	30.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCGCATGTTTCAGG	7	True	NA	NA	False	NA	NA	NA	41397356	41391536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41391963_41392866_41392981_41397180
transcript_71260.known	chr19	-	463	2	FSM	ENSG00000177191.3	ENST00000601379.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGAGCTCAGGACGA	26	True	NA	NA	False	NA	NA	NA	41427362	41426055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41426440_41427283
transcript_71261.known	chr19	-	1874	3	FSM	ENSG00000177191.3	ENST00000321702.2	1874	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGGTTGTTTTTGCA	7748	False	NA	-1	True	AAAACA	-18	NA	41428730	41425358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41426811_41427283_41427571_41428595
transcript_71262.known	chr19	-	1065	6	FSM	ENSG00000105341.19	ENST00000417807.7	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	135.320951814566	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGGCTGTTAGTA	-1	True	NA	NA	False	NA	NA	NA	41439539	41431987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_71265.known	chr19	-	1134	5	FSM	ENSG00000105341.19	ENST00000301183.15	1134	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	148.860673114157	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCATAGTATTGCTGG	-1	True	NA	NA	False	ACTAAA	-15	NA	41439539	41431755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_71273.known	chr19	-	1727	1	FSM	ENSG00000105341.19	ENST00000597608.1	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	False	NA	NA	False	CATAAA	-26	NA	41440692	41438965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41439000_41440700
transcript_71274.known	chr19	-	979	5	FSM	ENSG00000105341.19	ENST00000589970.5	979	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	50.8379779298902	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCTACTACTGACACTTT	7	True	NA	NA	False	NA	NA	NA	41439908	41431871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_71275.known	chr19	-	1700	6	FSM	ENSG00000105341.19	ENST00000221943.14	1700	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	76.9919476309049	5588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	3	True	NA	-1	True	ATTAAA	-19	NA	41439912	41431317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_71276.known	chr19	-	1454	4	FSM	ENSG00000105341.19	ENST00000438807.7	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	97.6057830709271	5174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	5	True	NA	-1	True	ATTAAA	-19	NA	41439910	41431317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433536_41433674_41438217_41438415_41439881
transcript_71277.known	chr19	-	1622	5	FSM	ENSG00000105341.19	ENST00000592922.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	81.3664550045042	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCCTGTTCAAGTT	NA	False	NA	-22	True	NA	NA	NA	41439936	41431338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41438217_41438415_41439881
transcript_71278.known	chr19	+	948	2	FSM	ENSG00000204978.3	ENST00000378187.3	948	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCACCTGTTTCTAAATT	-3	True	NA	NA	False	AGTAAA	-17	NA	41443155	41444765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41443344_41444005
transcript_71279.known	chr19	+	467	3	FSM	ENSG00000270164.2	ENST00000483481.2	467	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGTGATTTGATTTTT	117	False	NA	NA	False	AATAAA	-23	NA	41535497	41536904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41535602_41535727_41535784_41536597
transcript_71281.known	chr19	+	601	2	FSM	ENSG00000268027.5	ENST00000601116.5	601	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATAGTGTGCCCAGAT	2	True	NA	NA	False	NA	NA	NA	41549519	41550705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41549553_41550137
transcript_713.nic	chr1	+	964	4	FSM	ENSG00000217801.11	ENST00000456409.6	957	4	-7	0	-1	0	multi-exon	FALSE	canonical	2	5	junction_1	1.24721912892465	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCCTCGGCACCTA	1232	False	NA	21	True	NA	NA	NA	1059685	1066456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1063078_1063202_1065829
transcript_71304.known	chr19	+	668	6	FSM	ENSG00000105372.8	ENST00000600467.6	668	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	13167.7527558806	81162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	-1	True	NA	31	True	AATAAA	-16	NA	41860254	41871416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41860446_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_71305.known	chr19	+	526	6	FSM	ENSG00000105372.8	ENST00000593863.5	526	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	13256.6799101434	81272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	15	True	NA	31	True	AATAAA	-16	NA	41860445	41871416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41860495_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_71314.known	chr19	+	500	6	FSM	ENSG00000105372.8	ENST00000221975.6	500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13281.5229909826	130619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	1	True	NA	31	True	AATAAA	-16	NA	41860256	41871416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41860290_41860784_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_71315.known	chr19	+	313	4	FSM	ENSG00000105372.8	ENST00000598261.2	313	4	0	0	0	0	multi-exon	FALSE	canonical	2	1017	junction_3	14035.5070050529	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGTGGCCCGCCGGGT	22	False	NA	NA	False	NA	NA	NA	41860277	41869146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41860290_41860774_41860846_41861111_41861226_41869030
transcript_71316.nnic	chr19	+	1052	6	Fusion	ENSG00000105369.10_ENSG00000105372.8	novel	668	6	NA	NA	-3	0	multi-exon	FALSE	canonical	1	1	junction_3	13922.9001346702	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGGCAGGAGTCGTGG	344	False	NA	16	True	AATAAA	-16	NA	41860774	41881372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_41860846_41861111_41861213_41878989_41879176_41879534_41879654_41880669_41880739_41880866
transcript_71317.nnic	chr19	+	1166	6	Fusion	ENSG00000105369.10_ENSG00000105372.8	novel	668	6	NA	NA	-3	0	multi-exon	FALSE	canonical	1	1	junction_3	13922.9001346702	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGGCAGGAGTCGTGG	344	False	NA	16	True	AATAAA	-16	NA	41860774	41881372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_41860846_41861111_41861213_41878989_41879290_41879534_41879654_41880669_41880739_41880866
transcript_71318.known	chr19	+	567	5	FSM	ENSG00000105369.10	ENST00000444740.2	567	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.29128784747792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCTACTCCTGCCAGGC	3	False	NA	NA	False	NA	NA	NA	41877304	41880980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41877384_41878989_41879176_41879534_41879654_41880669_41880739_41880866
transcript_71319.known	chr19	+	1099	5	FSM	ENSG00000105369.10	ENST00000221972.8	1099	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.29128784747792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGGCAGGAGTCGTGG	0	True	NA	16	True	AATAAA	-16	NA	41877278	41881372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41877384_41878989_41879290_41879534_41879654_41880669_41880739_41880866
transcript_71321.known	chr19	+	3229	29	FSM	ENSG00000076928.18	ENST00000354532.8	3229	29	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_1	31.4068106483616	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	-25	True	NA	32	True	AATATA	-16	NA	41883183	41907452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_71322.known	chr19	+	3171	29	FSM	ENSG00000076928.18	ENST00000337665.8	3171	29	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	33.3016516106934	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	31	True	NA	34	True	AATATA	-18	NA	41884447	41907454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_71327.known	chr19	+	2272	4	FSM	ENSG00000076928.18	ENST00000600387.5	2272	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	58.8614191696621	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGCCTGGTGGTAG	2094	False	NA	NA	False	NA	NA	NA	41883172	41890776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751
transcript_71329.known	chr19	-	3551	23	FSM	ENSG00000105409.19	ENST00000648268.1	3551	23	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_15	18.6722492635993	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	-3	True	NA	-1	True	AATATA	-18	NA	41994230	41966581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
transcript_71335.known	chr19	-	728	5	FSM	ENSG00000105404.11	ENST00000601078.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	653.283772567481	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTCTGCTGCTCGGGCC	9615	False	NA	-116	True	NA	NA	NA	41959275	41956780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959114
transcript_71337.known	chr19	-	662	1	FSM	ENSG00000105404.11	ENST00000598057.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	339	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	9983	False	NA	-16	True	AATAAA	-28	NA	41957342	41956680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956700_41957300
transcript_71338.known	chr19	-	750	5	FSM	ENSG00000105404.11	ENST00000222008.11	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	1357	junction_2	153.451946875887	12305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCCCAGCATCTTCTG	7	True	NA	-18	True	AATAAA	-26	NA	41959321	41956682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_71339.known	chr19	-	653	5	FSM	ENSG00000105404.11	ENST00000600292.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	642.117347141471	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	9624	False	NA	-16	True	AATAAA	-28	NA	41959266	41956680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956891_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_71340.known	chr19	-	628	4	FSM	ENSG00000105404.11	ENST00000601891.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	774.081103990761	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	29	True	NA	-16	True	AATAAA	-28	NA	41959299	41956680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956935_41958285_41958384_41958735_41958949_41959236
transcript_71345.known	chr19	+	3087	2	FSM	ENSG00000105732.13	ENST00000359044.5	3087	2	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGAGTGGAATTTGG	-7	True	NA	9	True	AATAAA	-17	NA	42076165	42081552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42076287_42078586
transcript_71351.known	chr19	-	673	3	FSM	ENSG00000028277.22	ENST00000598842.2	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATACATGTATGTAAGA	339	False	NA	NA	False	ATTAAA	-31	NA	42095611	42093466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42093896_42095285_42095463_42095544
transcript_71352.known	chr19	+	759	3	FSM	ENSG00000254887.1	ENST00000527895.1	759	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGCTAAGCTCAGAGA	NA	False	NA	NA	False	AATAAA	-28	NA	42132554	42137099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42132762_42132904_42133029_42136671
transcript_71354.known	chr19	-	2193	11	FSM	ENSG00000105723.13	ENST00000222330.8	2193	11	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_10	25.8835855321476	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	1	True	NA	-5	True	AATAAA	-16	NA	42242602	42230189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605_42236717_42236857_42236942_42239954_42240143_42242182
transcript_71355.known	chr19	-	715	5	FSM	ENSG00000160570.14	ENST00000598415.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	101.322196482311	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGGCTGTGGGCCGGGA	-25	True	NA	NA	False	NA	NA	NA	42217724	42199566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42199830_42204461_42204560_42209699_42209841_42215132_42215253_42217631
transcript_71358.known	chr19	-	550	4	FSM	ENSG00000160570.14	ENST00000600559.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	116.584733134317	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCCTGCGGGGCGTGTT	-9	True	NA	NA	False	NA	NA	NA	42217708	42199602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42199830_42209699_42209841_42215147_42215253_42217631
transcript_7136.known	chr1	-	2006	19	FSM	ENSG00000174842.17	ENST00000370360.8	2006	19	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_12	39.3432190966739	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTCTATAATGATACA	-7	True	NA	-8	True	AATAAA	-19	NA	92298987	92246401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_71360.nnic	chr19	-	892	4	NNC	ENSG00000105723.13	novel	2193	11	NA	NA	3	0	intron_retention	FALSE	non_canonical	0	0	junction_3	214.906181080644	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	4	True	NA	-5	True	AATAAA	-16	NA	42242599	42230189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_42230868_42232056_42232150_42232495_42232545_42242527
transcript_71361.known	chr19	+	3982	3	FSM	ENSG00000167625.11	ENST00000301215.8	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	-8	True	NA	NA	False	NA	NA	NA	42220311	42228201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42220388_42224214_42224306_42224386
transcript_71362.nnic	chr19	-	1396	3	NNC	ENSG00000160570.14	novel	1905	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	147.5	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	-1	True	NA	-14	True	ATTAAA	-28	NA	42217766	42198597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_42199830_42209699_42209729_42217631
transcript_71363.nnic	chr19	-	1510	3	NIC	ENSG00000160570.14	novel	1905	5	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	142	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	-3	True	NA	-14	True	ATTAAA	-28	NA	42217768	42198597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_42199830_42209699_42209841_42217631
transcript_71364.nnic	chr19	-	696	3	NNC	ENSG00000160570.14	novel	1882	5	NA	NA	-16	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57.5	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGGCCTCTCTAGGACT	2382	False	NA	-17	True	ATTAAA	-25	NA	42217773	42198600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_42199050_42215147_42215253_42217631
transcript_71367.known	chr19	+	8218	21	FSM	ENSG00000079432.9	ENST00000572681.6	8218	21	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	25.0229394756092	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGGCTGTAGGCTCT	1	True	NA	24	True	ATTAAA	-14	NA	42268536	42295796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42268595_42271773_42274578_42286770_42286921_42287005_42287241_42287319_42287450_42287544_42287728_42287809_42287976_42288887_42289091_42289180_42289407_42289847_42289952_42290232_42291467_42291557_42291746_42292085_42292208_42292299_42292467_42292568_42292860_42292958_42293282_42293591_42293837_42293937_42294090_42294172_42294305_42294603_42294736_42294823
transcript_7137.known	chr1	-	769	3	FSM	ENSG00000174842.17	ENST00000471465.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCATTATGATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	92248408	92246491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92246647_92247061_92247145_92247877
transcript_71370.known	chr19	-	582	6	FSM	ENSG00000079462.8	ENST00000595530.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	351.865883540874	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCTCGGGCCCACTTCC	16	True	NA	NA	False	NA	NA	NA	42302770	42297279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_71372.known	chr19	-	465	6	FSM	ENSG00000079462.8	ENST00000596265.5	465	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	439.951997381533	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTGAACGAGCTGGTAC	58	False	NA	NA	False	NA	NA	NA	42302728	42297315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42297366_42300008_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302698
transcript_71379.known	chr19	+	1523	3	FSM	ENSG00000188368.11	ENST00000341747.8	1523	3	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_2	6	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	-4	True	NA	6	True	AATAAA	-16	NA	42302131	42310814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42302504_42309578_42310186_42310270
transcript_7138.known	chr1	-	1833	18	FSM	ENSG00000174842.17	ENST00000495106.5	1833	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	95.1660722888094	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCATTATGATTCATTTA	-7	True	NA	-19	True	AATAAA	-20	NA	92298987	92246489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_71383.known	chr19	+	1271	3	FSM	ENSG00000188368.11	ENST00000595750.2	1271	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	3	True	NA	5	True	AATAAA	-15	NA	42306952	42310813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42307074_42309578_42310186_42310270
transcript_71385.known	chr19	+	1641	2	FSM	ENSG00000188368.11	ENST00000598490.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	NA	False	NA	5	True	AATAAA	-15	NA	42302097	42310813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42302504_42309578
transcript_71386.known	chr19	-	1054	5	FSM	ENSG00000079462.8	ENST00000262890.8	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_1	34.6292867382509	4494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTTCCTGCTTTAT	-15	True	NA	-24	True	ATTAAA	-15	NA	42302624	42297034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231
transcript_71387.known	chr19	-	1098	6	FSM	ENSG00000079462.8	ENST00000538771.5	1098	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	230.58967886703	3899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	9	True	NA	-22	True	ATTAAA	-17	NA	42302777	42297032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302436
transcript_71388.known	chr19	-	649	5	FSM	ENSG00000079462.8	ENST00000594989.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	395.598913041985	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTTCCTGCTTTA	494	False	NA	-25	True	ATTAAA	-14	NA	42302292	42297035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42297366_42300041_42300093_42300170_42300288_42301949_42302040_42302231
transcript_71390.known	chr19	-	533	4	FSM	ENSG00000105427.10	ENST00000222032.10	533	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	113.850779531806	1478	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCCTACATCCATTTTG	-3	True	NA	-10	True	AATAAA	-15	NA	42390297	42387018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42387243_42387339_42387477_42388925_42389040_42390239
transcript_71398.nnic	chr19	+	500	3	FSM	ENSG00000213904.10	ENST00000685146.1	444	3	-58	2	-13	-1	multi-exon	FALSE	canonical	0	0	junction_1	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTGCTGGGCATAGC	NA	False	NA	6	True	AGTAAA	-16	NA	42397100	42408441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42397225_42401168_42401361_42408257
transcript_71399.nnic	chr19	+	549	3	NNC	ENSG00000213904.10	novel	723	5	NA	NA	0	11604	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGTGGGAGAATGTCAT	-6	True	NA	NA	False	AATAAA	-27	NA	42397158	42497198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_42397225_42485095_42485224_42496843
transcript_714.known	chr1	+	977	4	FSM	ENSG00000217801.11	ENST00000427998.6	982	4	5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.94392028877595	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCCTCGGCACCTA	0	True	NA	21	True	NA	NA	NA	1059733	1066456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059847_1060279_1060394_1063078_1063202_1065829
transcript_71400.nnic	chr19	+	658	3	NNC	ENSG00000213904.10	novel	723	5	NA	NA	0	31877	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-6	True	NA	5	True	AATAAA	-16	NA	42397158	42557746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_42397225_42485095_42485224_42557282
transcript_71405.nnic	chr19	+	393	3	NNC	ENSG00000213904.10	novel	444	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGGGCATAGCTC	-1	True	NA	8	True	AGTAAA	-18	NA	42397163	42408443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_42397225_42400567_42400714_42408257
transcript_71408.known	chr19	+	292	2	FSM	ENSG00000213904.10	ENST00000593491.3	306	2	14	0	14	0	multi-exon	FALSE	canonical	3	21	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGCTCTCGGCTGGT	1	True	NA	17	True	AGTAAA	-27	NA	42397127	42408452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42397225_42408257
transcript_71409.known	chr19	+	251	2	FSM	ENSG00000213904.10	ENST00000599276.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGCTGGGCATAGCT	4417	False	NA	7	True	AGTAAA	-17	NA	42401581	42408442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42401648_42408257
transcript_71410.known	chr19	+	1448	3	FSM	ENSG00000213904.10	ENST00000594624.6	1448	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCCGTCCACATTTC	9	True	NA	9	True	AATAAA	-18	NA	42397173	42652355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42397225_42485095_42485224_42651086
transcript_71411.known	chr19	-	748	4	FSM	ENSG00000189377.9	ENST00000341918.4	748	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCCTTCAAATGGGGT	172	False	NA	NA	False	AATAAA	-26	NA	42442852	42428532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42428982_42432975_42433095_42433775_42433857_42442753
transcript_71412.known	chr19	-	3427	8	FSM	ENSG00000079385.23	ENST00000403444.7	3427	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.55550625999976	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCGACATGCTGCCTCA	-9	True	NA	-8	True	AATAAA	-13	NA	42528478	42507313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42509229_42510888_42510921_42512349_42512480_42518947_42519236_42521266_42521522_42521923_42522203_42527040_42527401_42528310
transcript_71413.known	chr19	-	301	2	FSM	ENSG00000231412.3	ENST00000595748.2	721	2	114	306	114	-306	multi-exon	TRUE	canonical	3	32	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGAAAAGGCCCTG	107	False	NA	NA	False	NA	NA	NA	43331430	43329294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43329509_43331343
transcript_71415.known	chr19	+	2195	9	FSM	ENSG00000204936.10	ENST00000618265.5	2195	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	4	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGTTCTATACGCAATT	-1	True	NA	23	True	CATAAA	-24	NA	43353685	43363172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43353767_43353852_43353994_43354206_43354393_43355660_43355784_43355991_43356109_43360264_43360406_43361142_43361329_43361444_43361580_43362087
transcript_71420.nnic	chr19	-	1244	4	Antisense	novelGene_ENSG00000131126.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.63299316185545	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCTGAAGTTTTTCCTT	NA	False	NA	2	True	ATTAAA	-16	NA	43421050	43409056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_43409769_43414725_43414991_43417612_43417736_43420906
transcript_71422.known	chr19	-	1642	5	FSM	ENSG00000124466.9	ENST00000244333.4	1642	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	13.9104277432436	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-2	True	NA	-7	True	AATAAA	-23	NA	43465608	43460786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43461848_43463125_43463288_43463598_43463770_43464324_43464457_43465492
transcript_71429.known	chr19	-	920	7	FSM	ENSG00000105755.8	ENST00000292147.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	22.6274169979695	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	4	True	NA	-3	True	AATAAA	-17	NA	43527201	43506718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43527096
transcript_71434.known	chr19	-	702	6	FSM	ENSG00000105755.8	ENST00000594342.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	47.2922826685285	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGACACTGCACCTCT	0	True	NA	-76	True	NA	NA	NA	43527205	43506791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526514_43526660_43527096
transcript_71438.nnic	chr19	-	681	5	NIC	ENSG00000105755.8	novel	920	7	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	55.8233821977852	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-14	True	NA	-3	True	AATAAA	-17	NA	43527256	43506718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43527096
transcript_7144.known	chr1	+	16899	13	FSM	ENSG00000122484.9	ENST00000610020.2	16899	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	8.86315720020555	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCCAATTCTATTTTC	11	True	NA	3	True	AATAAA	-16	NA	92299058	92402056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444_92324376_92333390_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
transcript_71444.known	chr19	-	1994	16	FSM	ENSG00000073050.12	ENST00000543982.5	1994	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_15	57.0943079474653	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAGTCTCCCAAAAC	-37	True	NA	-22	True	AATAAA	-16	NA	43575563	43543311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43575407
transcript_71449.known	chr19	+	914	6	FSM	ENSG00000234465.11	ENST00000612042.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.9052841744919	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTGTGGTGTGATGTA	3	False	NA	NA	False	TATAAA	-22	NA	43576799	43582103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43576920_43577114_43577262_43578589_43578707_43581211_43581365_43581562_43581704_43581867
transcript_71451.nic	chr19	+	960	5	ISM	ENSG00000234465.11	ENST00000612042.4	914	6	144	5	144	0	3prime_fragment	FALSE	canonical	3	6	junction_2	36.3275033548963	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	147	False	NA	NA	False	TATAAA	-17	NA	43576943	43582098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_43577262_43578589_43578707_43581211_43581365_43581562_43581704_43581867
transcript_71456.known	chr19	+	569	4	FSM	ENSG00000234465.11	ENST00000562255.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.5592345297419	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	3747	False	NA	NA	False	TATAAA	-17	NA	43580543	43582098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43580588_43581211_43581365_43581562_43581704_43581867
transcript_71458.known	chr19	+	557	4	FSM	ENSG00000234465.11	ENST00000569031.6	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	28.3901391331568	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	89	False	NA	NA	False	TATAAA	-17	NA	43580637	43582098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43580670_43581211_43581365_43581562_43581704_43581867
transcript_71461.known	chr19	-	2052	17	FSM	ENSG00000073050.12	ENST00000262887.10	2052	17	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_7	20.4110111214511	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-1	True	NA	-21	True	AATAAA	-17	NA	43575527	43543310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_71462.known	chr19	+	706	3	FSM	ENSG00000234465.11	ENST00000562365.2	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	3	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTGGTGTGATGTAT	488	False	NA	NA	False	TATAAA	-23	NA	43581036	43582104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43581365_43581562_43581704_43581867
transcript_71463.known	chr19	+	867	3	FSM	ENSG00000124444.16	ENST00000533118.5	867	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGGGAAGGGAGTG	67	False	NA	101	True	NA	NA	NA	43596479	43599494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43596586_43597096_43597194_43598830
transcript_71467.known	chr19	+	859	3	FSM	ENSG00000124444.16	ENST00000528387.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTCTCCCTTATT	49	False	NA	NA	False	NA	NA	NA	43596574	43599525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43596639_43597093_43597194_43598830
transcript_71469.known	chr19	+	830	3	FSM	ENSG00000124444.16	ENST00000529930.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44.5	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGCTTCAGTCTTTGG	-20	True	NA	21	True	AATAAA	-21	NA	43596594	43599414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43596744_43597096_43597194_43598830
transcript_71472.known	chr19	-	1162	3	FSM	ENSG00000131116.12	ENST00000300811.8	1162	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	57	586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGTGCTGGGTGAGT	-16	True	NA	-1	True	AATAGA	-18	NA	43619629	43607223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43608108_43614228_43614435_43619557
transcript_71480.known	chr19	-	1254	7	FSM	ENSG00000011422.12	ENST00000339082.7	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	34.6333974975344	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGGGCATGCCTGTG	1	True	NA	NA	False	AATAAA	-16	NA	43670166	43646094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43646549_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_71488.nic	chr19	-	1847	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	33.5939809423586	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	6012	False	NA	-20	True	CATAAA	-18	NA	43668359	43648578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43667776
transcript_71489.nic	chr19	-	1524	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_6	39.4363058896523	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	6068	False	43668321	-20	True	CATAAA	-18	NA	43668303	43648578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668043
transcript_7149.nnic	chr1	+	1298	12	NIC	ENSG00000122484.9	novel	16899	13	NA	NA	-76	77	combination_of_known_splicesites	TRUE	canonical	2	2	junction_7	24.8552836227419	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTCAAGAAAATATAATGA	NA	False	NA	NA	False	ATTAAA	-17	NA	92298982	92387310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92333390_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
transcript_71491.nic	chr19	-	1371	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	35.0507568471147	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	5988	False	NA	-20	True	CATAAA	-18	NA	43668383	43648578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668276
transcript_71492.known	chr19	-	1368	7	FSM	ENSG00000011422.12	ENST00000340093.8	1368	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	17.2626765016321	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-2	True	NA	-20	True	CATAAA	-18	NA	43670169	43648578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_71497.known	chr19	-	1610	6	FSM	ENSG00000011422.12	ENST00000221264.8	1610	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	42.4405466505793	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	3824	False	NA	-21	True	CATAAA	-17	NA	43670547	43648579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43649144_43652224_43652372_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_71502.known	chr19	-	1205	6	FSM	ENSG00000011422.12	ENST00000601723.5	1205	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	43.4207323752145	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	4218	False	NA	-20	True	CATAAA	-18	NA	43670153	43648578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43649144_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_71503.known	chr19	-	742	6	FSM	ENSG00000011422.12	ENST00000599892.5	742	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	38.0610036651689	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGCCCTCTCCGAGGC	1	True	NA	NA	False	NA	NA	NA	43668320	43652225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668276
transcript_71505.known	chr19	-	5491	14	FSM	ENSG00000105771.14	ENST00000270066.11	5491	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	28.4157636058188	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCGATTGGTCTCTAT	-27	True	NA	NA	False	AATAAA	-29	NA	43754962	43727982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43744771_43744885_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
transcript_71513.known	chr19	-	1270	7	FSM	ENSG00000104783.15	ENST00000648053.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.89296944860009	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAAGTTGCCATTTCTCT	9081	False	NA	-12	True	AATAAA	-9	NA	43773900	43766538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43767090_43767539_43767708_43768962_43769033_43769441_43769561_43769718_43769830_43771999_43772136_43773785
transcript_71514.known	chr19	-	1519	4	FSM	ENSG00000159871.15	ENST00000594013.5	1519	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGCAGAGACTGTGGG	-6	True	NA	NA	False	NA	NA	NA	43800029	43796958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43797830_43798454_43798602_43798811_43798989_43799705
transcript_71516.known	chr19	+	2462	7	FSM	ENSG00000167637.18	ENST00000650832.1	2462	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.85861230093008	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATATAATTAATATGAAA	7	True	NA	NA	False	NA	NA	NA	43827377	43848809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43827445_43827775_43827941_43828201_43828282_43831317_43831382_43835504_43835593_43837052_43837180_43846938
transcript_71517.known	chr19	+	2428	6	FSM	ENSG00000167637.18	ENST00000588797.6	2428	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	5.40370243444252	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGTGTGAAGATCTTCA	3	True	NA	NA	False	TTTAAA	-6	NA	43827373	43848898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43827445_43827775_43827941_43828201_43828282_43831317_43831382_43835504_43835593_43846938
transcript_71521.nic	chr19	-	2816	5	Fusion	ENSG00000267058.1_ENSG00000176222.9	novel	1849	3	NA	NA	-24	0	multi-exon	FALSE	canonical	3	13	junction_2	4.7169905660283	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCTATGAGTGTGATATT	-19	True	NA	-9	True	AATAAA	-15	NA	43901829	43872364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_43874078_43880009_43880137_43883955_43884052_43900867_43900955_43901036
transcript_71523.known	chr19	-	2193	3	FSM	ENSG00000267058.1	ENST00000587128.1	2193	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACACCTTTTATTTTTTC	5	True	NA	NA	False	AATAAA	-21	NA	43901805	43891803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43893141_43900867_43900955_43901036
transcript_71525.known	chr19	-	504	2	FSM	ENSG00000267058.1	ENST00000591815.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTGAAAGAGGAAAGAATT	299	False	NA	NA	False	AAAAAG	-2	NA	43901511	43900917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43900955_43901044
transcript_7153.nic	chr1	+	827	8	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-76	78400	-76	-428	5prime_fragment	FALSE	canonical	3	76	junction_3	5.823947745897	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATAATGAAAAAGAAAGCT	NA	False	NA	NA	False	NA	NA	NA	92298982	92323656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444
transcript_71530.known	chr19	+	1831	3	FSM	ENSG00000267191.3	ENST00000586247.2	1831	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATAGGTCTGGTATTTAG	-1	True	NA	NA	False	NA	NA	NA	43901908	43927767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43902145_43925141_43925255_43926285
transcript_71531.nnic	chr19	+	410	2	NNC	ENSG00000267191.3	novel	413	2	NA	NA	0	3989	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTAATTTTTGTAT	-11	True	NA	NA	False	ATTAAA	-15	NA	43901865	43906325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43902145_43906194
transcript_71532.nnic	chr19	+	391	2	NNC	ENSG00000267191.3	novel	359	2	NA	NA	6	3989	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTAATTTTTGTAT	-5	True	NA	NA	False	ATTAAA	-15	NA	43901871	43906325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43902132_43906194
transcript_71534.known	chr19	+	2535	6	FSM	ENSG00000159905.15	ENST00000251269.9	2535	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.70613704707484	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTGATCCGCCCGCCTT	14	False	NA	NA	False	NA	NA	NA	43951244	43967709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43951401_43960186_43960357_43962724_43962808_43964949_43965077_43965232_43965326_43965803
transcript_71535.nnic	chr19	+	2662	7	NNC	ENSG00000204920.11	novel	2222	6	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	19.6948949956299	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTGTCTGTGCTTCTT	NA	False	NA	42	True	ATTAAA	-18	NA	43984171	43998326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43984246_43988458_43988559_43990023_43990113_43991547_43991675_43991841_43991935_43996092_43998000_43998054
transcript_71537.nnic	chr19	+	2573	6	NNC	ENSG00000204920.11	novel	2612	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	18.5903200617956	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTGTCTGTGCTTCTT	NA	False	NA	42	True	ATTAAA	-18	NA	43984171	43998326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43984246_43988458_43988559_43991547_43991675_43991841_43991935_43996092_43998000_43998054
transcript_71539.known	chr19	+	2732	5	FSM	ENSG00000204920.11	ENST00000611002.4	2732	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.765816451642	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGTGTCTGTGCTTCT	NA	False	NA	41	True	ATTAAA	-17	NA	43984169	43998325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_71540.known	chr19	+	576	5	FSM	ENSG00000204920.11	ENST00000591532.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	18.9390469665187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGTAAACAGTCCAT	-12	True	NA	NA	False	NA	NA	NA	43984190	43996307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43984232_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_71543.known	chr19	+	1888	5	FSM	ENSG00000204920.11	ENST00000590615.5	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	17.2970373185699	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTACCTCAAACATTT	14	True	NA	NA	False	NA	NA	NA	43984216	43997554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43984323_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_71547.known	chr19	+	559	5	FSM	ENSG00000204920.11	ENST00000586454.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.765816451642	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTATCATAAATAACTCT	18	True	NA	NA	False	NA	NA	NA	43984220	43996203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_71550.known	chr19	+	4104	5	FSM	ENSG00000159882.13	ENST00000429154.7	4104	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	6.29980158417708	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGTAAGTTCACAATG	-19	True	NA	NA	False	AATAAA	-18	NA	44002956	44013924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44003108_44007010_44007094_44008789_44008917_44009083_44009171_44010268
transcript_71552.known	chr19	+	4085	5	FSM	ENSG00000159882.13	ENST00000585568.5	4085	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.27774356864	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAACTTATTAACGTT	0	True	NA	NA	False	AATAAA	-1	NA	44002975	44013849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44003108_44007010_44007094_44008789_44008992_44009083_44009171_44010268
transcript_71554.known	chr19	-	400	2	FSM	ENSG00000266921.2	ENST00000670660.1	400	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAGGCTTCTCTCCAA	NA	False	NA	NA	False	AGTAAA	-17	NA	44002858	43999067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43999233_44002623
transcript_71556.known	chr19	+	1794	1	FSM	ENSG00000159882.13	ENST00000589275.1	1794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAACTGCCATATTAT	-17	True	NA	NA	False	AATAAA	-1	NA	44002958	44004752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44003000_44004800
transcript_71558.nic	chr19	+	1734	5	NIC	ENSG00000159885.14	novel	1614	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	4.32290411644765	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	NA	False	NA	9	True	ATTAAA	-22	NA	44025319	44033110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_44025479_44026025_44026087_44027022_44027150_44027397_44027491_44031816
transcript_71559.nnic	chr19	+	655	5	NNC	ENSG00000178386.13	novel	2399	5	NA	NA	-26	1086	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	16.7182534973005	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTGTTTGTTTATGAC	-20	True	NA	NA	False	AATATA	-15	NA	44052009	44062010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44061844
transcript_7156.nic	chr1	+	489	5	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-76	97708	-76	-19736	5prime_fragment	FALSE	canonical	3	76	junction_3	3.63145976158349	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGTTTAAAGGCTTTCA	NA	False	NA	NA	False	AATAAA	-24	NA	92298982	92304348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283
transcript_71560.known	chr19	+	2399	5	FSM	ENSG00000178386.13	ENST00000434772.8	2399	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	6.75925291729789	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGTTTCTGGAAT	6	True	NA	NA	False	AATAAA	-27	NA	44052035	44067999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44066063
transcript_71562.known	chr19	+	4336	5	FSM	ENSG00000186026.7	ENST00000421176.4	4336	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1.11803398874989	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGGTGCATCACATTT	-8	True	NA	7	True	AATAAA	-19	NA	44072158	44089613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44072292_44076321_44076405_44081014_44081142_44082012_44082106_44085713
transcript_71563.known	chr19	+	1614	4	FSM	ENSG00000159885.14	ENST00000391960.4	1614	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.32049379893857	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	20	True	NA	9	True	ATTAAA	-22	NA	44025378	44033110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44025479_44027022_44027150_44027397_44027491_44031816
transcript_71565.nic	chr19	+	1580	3	NIC	ENSG00000159885.14	novel	1598	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	7.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	NA	False	NA	9	True	ATTAAA	-22	NA	44025319	44033110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_44025479_44027022_44027150_44031816
transcript_71566.known	chr19	+	3980	6	FSM	ENSG00000267680.6	ENST00000336976.10	3980	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	15.9824904192056	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCAGGCATTTT	-2	True	NA	75	True	AATGAA	-26	NA	44094391	44109886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44094489_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
transcript_71571.known	chr19	+	4447	5	FSM	ENSG00000256294.8	ENST00000262894.11	4447	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	4.55521678957215	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGTGGGGCTAATATT	-17	True	NA	19	True	ATTAAA	-28	NA	44113398	44134822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44113570_44115759_44115843_44118187_44118315_44118481_44118575_44130849
transcript_71574.known	chr19	-	424	2	FSM	ENSG00000186019.12	ENST00000590369.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTTTTGTGTGTCCGTG	221	False	NA	NA	False	ATTAAA	-19	NA	44112956	44111950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44112240_44112821
transcript_71576.known	chr19	+	1552	1	FSM	ENSG00000267680.6	ENST00000589060.1	1552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTTTTTATTACCTA	-4	True	NA	NA	False	AAAAAG	-3	NA	44094389	44095941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44094400_44095900
transcript_71577.known	chr19	-	3199	2	FSM	ENSG00000186019.12	ENST00000592946.1	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTACTCTTCCTAGTGA	6	True	NA	NA	False	AATAAA	-43	NA	44113145	44105462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44108338_44112821
transcript_71578.known	chr19	+	562	4	FSM	ENSG00000267680.6	ENST00000590614.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	17.5562587763516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGAATGTGTTGGGATTAA	-7	True	NA	NA	False	NA	NA	NA	44094386	44101088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44094489_44096342_44096432_44097805_44097889_44100800
transcript_7158.nic	chr1	+	1592	5	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-76	96605	-76	-18633	5prime_fragment	FALSE	canonical	3	76	junction_3	3.63145976158349	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATATGGGAAGATATAA	NA	False	NA	NA	False	NA	NA	NA	92298982	92305451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283
transcript_71584.known	chr19	+	4607	6	FSM	ENSG00000263002.8	ENST00000426739.7	4607	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	14.4166570327521	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGTCAATGAATTG	-6	True	NA	9	True	ATTAAA	-25	NA	44141553	44160313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_71588.nic	chr19	+	845	4	ISM	ENSG00000263002.8	ENST00000590795.1	663	6	-88	1215	0	479	5prime_fragment	FALSE	canonical	3	11	junction_1	17.9876500843094	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAACCAGGTGT	-6	True	NA	NA	False	AATAAA	-4	NA	44141553	44149290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770
transcript_71589.known	chr19	+	2292	6	FSM	ENSG00000263002.8	ENST00000592437.5	2292	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	10.2058806577385	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAACAGAA	-3	True	NA	NA	False	NA	NA	NA	44141556	44158119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44141616_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_71595.known	chr19	+	447	7	FSM	ENSG00000167380.17	ENST00000588742.5	447	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	55.8380595014627	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGATTTGAAGTTAGAA	9	True	NA	NA	False	NA	NA	NA	44165103	44175033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_71599.known	chr19	+	817	6	FSM	ENSG00000167380.17	ENST00000300823.10	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	47.1822000334872	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	9	True	NA	NA	False	ATTAAA	-16	NA	44165103	44175429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_71601.known	chr19	+	579	6	FSM	ENSG00000167380.17	ENST00000585678.5	579	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	38.6905673259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCAGATGGTCCCAA	12	True	NA	NA	False	NA	NA	NA	44165106	44175712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172091_44172215_44172859_44172953_44175497
transcript_71604.known	chr19	+	716	6	FSM	ENSG00000167380.17	ENST00000413984.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	52.4228957612988	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTAAACTGTGAGCA	8	True	NA	-79	True	NA	NA	NA	44165102	44175158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_71606.known	chr19	+	576	6	FSM	ENSG00000167380.17	ENST00000586914.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	47.2508200987031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAGAGAATCAGAAGAA	6	True	NA	NA	False	NA	NA	NA	44165100	44175530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_71608.known	chr19	+	2605	6	FSM	ENSG00000167380.17	ENST00000454662.6	2605	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	51.5037862685842	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGTCATTTGAATTCTT	29	False	NA	16	True	TATAAA	-18	NA	44165163	44177687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165247_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_71611.known	chr19	+	641	5	FSM	ENSG00000167380.17	ENST00000588795.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	42.7843429305628	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTTACACGGTGTGCT	21	True	NA	NA	False	AGTAAA	-21	NA	44165115	44173234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859
transcript_71615.known	chr19	+	5972	5	FSM	ENSG00000167380.17	ENST00000588883.5	5972	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	51.4556848171317	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGTTGCTAATGACACA	6	True	NA	NA	False	NA	NA	NA	44165100	44178381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859
transcript_71618.known	chr19	+	567	7	FSM	ENSG00000167380.17	ENST00000588127.5	567	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	53.3843505991118	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAATTTCTGAAGATGA	21	True	NA	NA	False	NA	NA	NA	44165115	44175679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_71620.nic	chr19	+	3191	6	NIC	ENSG00000131115.16	novel	3049	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	16.963490206912	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	15	True	NA	16	True	AATAAA	-21	NA	44212567	44237268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_44212764_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
transcript_71623.known	chr19	-	955	5	FSM	ENSG00000159917.17	ENST00000589799.5	955	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	10.1334840997556	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAACTGAAGTCCTTACC	-7	True	NA	NA	False	NA	NA	NA	44305019	44236109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44236730_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_71625.known	chr19	+	2757	5	FSM	ENSG00000159915.13	ENST00000683810.1	2757	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.53553390593274	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCTACAATCTGAGTAA	-13	True	NA	3	True	ATTAAA	-15	NA	44259885	44275317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44259939_44264313_44264376_44266197_44266325_44266865_44266962_44272898
transcript_71627.known	chr19	-	532	5	FSM	ENSG00000159917.17	ENST00000589248.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.1334840997556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTGAGGAAAATGGGAA	NA	False	NA	NA	False	TATAAA	-19	NA	44305046	44274751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44274922_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_71628.known	chr19	-	3190	5	FSM	ENSG00000159917.17	ENST00000291182.9	3190	5	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	8.0156097709407	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCTTTCATTATT	-13	True	NA	NA	False	AGTAAA	-16	NA	44305025	44286347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44289197_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_71630.known	chr19	-	3162	5	FSM	ENSG00000159917.17	ENST00000650576.1	3162	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	5.52268050859363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATTGTTAATACTTG	-13	True	NA	NA	False	AAAAAG	-12	NA	44305025	44286363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44289197_44298819_44298904_44299605_44299733_44303389_44303453_44304970
transcript_71632.nic	chr19	-	760	4	ISM	ENSG00000159917.17	ENST00000650576.1	3162	5	-10	12035	-10	-9594	5prime_fragment	FALSE	canonical	3	21	junction_3	2.16024689946929	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAAACATCTGTCACA	NA	False	NA	NA	False	NA	NA	NA	44305035	44298398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_44298904_44299605_44299733_44303389_44303453_44304970
transcript_71634.known	chr19	+	252	1	FSM	ENSG00000267590.1	ENST00000588007.1	252	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATCTCCACTGACAGG	NA	False	NA	NA	False	AAGAAA	-4	NA	44297103	44297355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44297100_44297400
transcript_71635.known	chr19	+	3049	6	FSM	ENSG00000131115.16	ENST00000313040.12	3049	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	13.2875881934985	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	-21	True	NA	16	True	AATAAA	-21	NA	44212531	44237268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
transcript_71636.known	chr19	+	2943	5	FSM	ENSG00000131115.16	ENST00000589005.5	2943	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	17.1081121109256	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	22	True	NA	15	True	AATAAA	-20	NA	44212574	44237267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44229732_44229817_44234701
transcript_71638.known	chr19	-	5384	6	FSM	ENSG00000278318.5	ENST00000620012.4	5384	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	7.62627038597505	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACTTTTTTGGCTTTTTC	17	False	NA	-1	True	ATTAAA	-20	NA	44448446	44426254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44430543_44431766_44432367_44442562_44442622_44442813_44443025_44447512_44447601_44448308
transcript_71640.known	chr19	-	4956	6	FSM	ENSG00000278318.5	ENST00000614049.5	4956	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.66643677887566	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTTGGCTTTTTCT	-9	True	NA	0	True	ATTAAA	-21	NA	44448472	44426253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44430543_44432221_44432367_44442562_44442622_44442813_44443025_44447512_44447601_44448308
transcript_71643.nnic	chr19	-	456	5	NNC	ENSG00000062370.17	novel	3321	5	NA	NA	-2	18883	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.87059749960509	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTTCCTTATGATTT	-5	True	NA	NA	False	AATAAA	-13	NA	44356684	44307671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_44307744_44329834_44329937_44336622_44336719_44340415_44340543_44356625
transcript_71645.known	chr19	-	2388	5	FSM	ENSG00000267508.6	ENST00000591679.5	2388	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.92442890089805	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACACTGGTTCCATTTC	37	False	NA	NA	False	NA	NA	NA	44401575	44385928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44388103_44392339_44392467_44394519_44394541_44397198_44397257_44401567
transcript_71647.known	chr19	-	525	5	FSM	ENSG00000278318.5	ENST00000592308.1	525	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.6389614154766	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTCACTGAGGAGGAG	2	True	NA	NA	False	NA	NA	NA	44448461	44432338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44432367_44442562_44442622_44442827_44443025_44447512_44447601_44448308
transcript_71649.known	chr19	-	3660	4	FSM	ENSG00000062370.17	ENST00000354340.9	3660	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	8.17856276425687	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGGGTTTTTTTATTC	-1	True	NA	-2	True	AATAAA	-15	NA	44356680	44326554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44329937_44336622_44336719_44340415_44340543_44356625
transcript_71651.known	chr19	-	6031	4	FSM	ENSG00000267508.6	ENST00000614994.5	6031	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCCCTTATGTGTGA	4	True	NA	NA	False	NA	NA	NA	44401608	44382297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44388103_44392339_44392467_44397198_44397257_44401567
transcript_71654.known	chr19	-	2793	4	FSM	ENSG00000267508.6	ENST00000544719.6	2793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.23609564462324	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGAGATTTTTGGTGGT	36	False	NA	-8	True	AATAAA	-17	NA	44401576	44385648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44388103_44392339_44392467_44397198_44397257_44401422
transcript_71658.known	chr19	-	1023	6	FSM	ENSG00000167384.11	ENST00000586637.5	1023	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	23.7267781209333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGTAAACAGTCATCAG	-6	True	NA	NA	False	CATAAA	-35	NA	44500522	44477789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44485035_44485158_44497283_44497378_44500274
transcript_71662.known	chr19	-	3131	5	FSM	ENSG00000167384.11	ENST00000590088.5	3131	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	18.2345825288105	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	-8	True	NA	NA	False	AGTAAA	-20	NA	44500524	44475638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500197
transcript_71663.known	chr19	-	837	5	FSM	ENSG00000167384.11	ENST00000591064.1	837	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.5093066677858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCATAAGAAACCATTTTC	-6	True	NA	NA	False	NA	NA	NA	44500522	44477848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497373_44500274
transcript_7167.nic	chr1	-	1505	9	ISM	ENSG00000067208.16	ENST00000684568.2	7795	20	-54	185106	-54	10056	5prime_fragment	FALSE	canonical	3	29	junction_8	9.50575483588757	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTTTATATTTTTG	-1	True	NA	NA	False	AATACA	-20	NA	92785162	92693801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92736397_92736628_92784835
transcript_71673.nnic	chr19	-	686	3	NNC	ENSG00000266903.2	novel	752	2	NA	NA	-66	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	9467	False	NA	NA	False	ATTAAA	-21	NA	44718825	44715556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_44715737_44715949_44716084_44718453
transcript_71676.nnic	chr19	-	897	2	NNC	ENSG00000266903.2	novel	876	2	NA	NA	-840	2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	8693	False	NA	NA	False	ATTAAA	-21	NA	44719599	44715556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_44716084_44719229
transcript_71677.known	chr19	-	752	2	FSM	ENSG00000266903.2	ENST00000591312.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACCCAGTCTCAGGT	9607	False	NA	NA	False	ATTAAA	-14	NA	44718685	44715563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44716084_44718453
transcript_71679.known	chr19	+	1576	11	FSM	ENSG00000142273.13	ENST00000647358.2	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	14.9786514746822	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGGCCAGCAGGG	-3	True	NA	27	True	AATAAA	-38	NA	44777889	44800652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_7168.nic	chr1	-	1275	8	NIC	ENSG00000067208.16	novel	7795	20	NA	NA	-54	10056	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	15.2489544639919	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTTTATATTTTTG	-1	True	NA	NA	False	AATACA	-20	NA	92785162	92693801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92784835
transcript_71681.known	chr19	+	1441	10	FSM	ENSG00000142273.13	ENST00000341505.4	1441	10	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	28.975085082801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	-24	True	NA	9	True	AATAAA	-20	NA	44777868	44800634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_71682.known	chr19	+	310	1	FSM	ENSG00000285128.1	ENST00000644659.1	310	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCGCAAATGACAGCAATCA	8089	False	NA	5	True	AATAAA	-16	NA	44803700	44804010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44803700_44804000
transcript_71683.known	chr19	+	2409	15	FSM	ENSG00000187244.12	ENST00000270233.12	2409	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	18.5922959687005	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGGCCAGAGCTTCCT	-1	True	NA	24	True	AATAAA	-24	NA	44809102	44821421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477_44812549_44813249_44813347_44813437_44813621_44814151_44814289_44814603_44814761_44818521_44818638_44818740_44818883_44819055_44819193_44819345_44819491_44819581_44819727_44820704_44820823_44820915
transcript_71686.known	chr19	+	914	2	FSM	ENSG00000187244.12	ENST00000588303.1	914	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCATAACAAGAGGAAAAGA	11	True	NA	NA	False	NA	NA	NA	44809114	44812046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44809207_44811224
transcript_71687.known	chr19	+	1768	9	FSM	ENSG00000130204.13	ENST00000426677.7	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	2328	junction_5	76.8602628150594	1800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGGCCTCCGTTTTCTC	-11	True	NA	23	True	AATATA	-18	NA	44891253	44903689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
transcript_71689.known	chr19	+	2690	9	FSM	ENSG00000130202.10	ENST00000252483.10	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	1327	junction_5	598.679797554586	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTCTTGCCTTTTCTGT	-29	True	NA	41	True	NA	NA	NA	44846296	44889223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44882210_44882365_44885936_44886001_44886132_44886220_44888109
transcript_71690.known	chr19	+	2112	6	FSM	ENSG00000130202.10	ENST00000252485.8	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	1204	junction_5	588.710658982832	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGTCTTGTAATACATC	NA	False	NA	27	True	AATAAA	-21	NA	44846174	44878941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44878222
transcript_71691.known	chr19	-	426	2	FSM	ENSG00000267282.1	ENST00000585408.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGATGAGTGGAGAACAAA	NA	False	NA	NA	False	NA	NA	NA	44890876	44882026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44882339_44890762
transcript_71704.known	chr19	+	689	5	FSM	ENSG00000130208.10	ENST00000588750.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	860.592637372642	9410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTCTCCTGAGTGCT	4894	False	NA	36	True	AATAAA	-11	NA	44914246	44919342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914490_44914671_44914734_44914871_44914950_44916189_44916326_44919172
transcript_7171.nic	chr1	-	891	3	ISM	ENSG00000067208.16	ENST00000684568.2	7795	20	-205	195866	-205	-704	5prime_fragment	FALSE	canonical	3	29	junction_2	3	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGGTATTCATGTTCT	7096	False	NA	NA	False	AAAAAG	-12	NA	92785313	92704561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_92704745_92736397_92736628_92784835
transcript_71720.known	chr19	+	553	4	FSM	ENSG00000130208.10	ENST00000588802.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	961.733157724463	5916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	0	True	NA	40	True	AATAAA	-15	NA	44914324	44919346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914490_44914871_44914950_44916189_44916326_44919172
transcript_71736.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592535.6	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_1	218.088666983561	26860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	6	True	NA	40	True	AATAAA	-15	NA	44914607	44919346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914734_44914871_44914950_44916189_44916326_44919172
transcript_71737.known	chr19	+	1166	4	FSM	ENSG00000130203.10	ENST00000252486.9	1166	4	0	0	0	0	multi-exon	FALSE	canonical	3	11010	junction_1	452.619290598868	1834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGCCTCCCCCTGTG	1	True	NA	33	True	AATAAA	-21	NA	44905795	44909393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44905842_44906601_44906668_44907759_44907953_44908532
transcript_71738.known	chr19	+	273	3	FSM	ENSG00000130208.10	ENST00000589781.1	273	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	806.5	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	2	True	NA	37	True	AATAAA	-12	NA	44914709	44919343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914734_44914871_44914950_44919172
transcript_71739.known	chr19	+	562	4	FSM	ENSG00000130208.10	ENST00000592885.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	948.780738046936	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTCCTGAGTGCTTC	-5	True	NA	38	True	AATAAA	-13	NA	44914702	44919344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914734_44914871_44914950_44916189_44916471_44919172
transcript_7174.known	chr1	-	2536	5	FSM	ENSG00000154511.12	ENST00000370310.5	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	5.04975246918104	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGATGGTTGGTC	8	True	NA	-11	True	AATAAA	-16	NA	92961462	92842166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92844196_92847182_92847360_92850847_92850956_92876295_92876431_92961375
transcript_71740.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592176.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1019.43590066053	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGAGTGCTTCTTTAC	16	True	NA	43	True	AATAAA	-18	NA	44914868	44919349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914950_44915097_44915218_44916189_44916326_44919172
transcript_71741.known	chr19	+	425	3	FSM	ENSG00000130208.10	ENST00000586638.5	425	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1106	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	16	True	NA	40	True	AATAAA	-15	NA	44914868	44919346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914950_44916189_44916360_44919172
transcript_71742.known	chr19	+	213	2	FSM	ENSG00000130208.10	ENST00000589078.1	213	2	0	0	0	0	multi-exon	FALSE	canonical	3	2216	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAACAGAGTGAACTTT	-13	True	NA	NA	False	NA	NA	NA	44914839	44916292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914950_44916189
transcript_71750.known	chr19	+	630	4	FSM	ENSG00000214855.10	ENST00000507983.7	630	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.3796750276019	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAATCGCTTGAAACCG	1	True	NA	NA	False	NA	NA	NA	44926803	44931386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44926833_44926955_44927034_44927794_44927931_44930999
transcript_71752.known	chr19	+	279	3	FSM	ENSG00000214855.10	ENST00000589081.2	301	3	19	3	16	-1	multi-exon	FALSE	canonical	1	2	junction_2	11	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTGGCCAGGCATGG	17	False	NA	11	True	AATAAA	-15	NA	44926819	44931190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44926830_44926955_44927034_44930999
transcript_71753.known	chr19	+	660	4	FSM	ENSG00000234906.11	ENST00000252490.7	660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGACTAATCTTTATTG	0	True	NA	NA	False	AATAAA	-37	NA	44946050	44949565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44946076_44948465_44948534_44948700_44948861_44949158
transcript_71754.known	chr19	+	2342	14	FSM	ENSG00000104853.16	ENST00000546079.5	2342	14	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	248.350606338376	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCGGGGGTGGGGCCGGGC	-2	True	NA	NA	False	NA	NA	NA	44954590	44993190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44954702_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_71755.known	chr19	+	2732	14	FSM	ENSG00000104853.16	ENST00000541297.6	2732	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	251.74503397322	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGCCGGGCCCCCCT	-2	True	NA	NA	False	NA	NA	NA	44954590	44993196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44955086_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_71756.known	chr19	+	2470	14	FSM	ENSG00000104853.16	ENST00000337392.10	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_6	51.2558266279416	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCCCCTCCTCCTCGT	-3	True	NA	34	True	AATAAA	-28	NA	44955379	44993341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44955468_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_71769.known	chr19	+	2229	21	FSM	ENSG00000104859.15	ENST00000221455.8	2229	21	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_12	27.95688645039	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGTGTCATCTGT	-16	True	NA	47	True	AATAAA	-26	NA	45039044	45070956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45039109_45040183_45040312_45052070_45052169_45052790_45052893_45053097_45053178_45056449_45056535_45057749_45057899_45059267_45059365_45060388_45060468_45060553_45060628_45062153_45062196_45064011_45064228_45064342_45064631_45067336_45067595_45068014_45068055_45068419_45068481_45069065_45069125_45069201_45069249_45070021_45070105_45070536_45070562_45070802
transcript_71774.known	chr19	+	599	2	FSM	ENSG00000104859.15	ENST00000588247.5	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCACGAGTTCGAGACC	13	True	NA	NA	False	NA	NA	NA	45039073	45040747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45039109_45040183
transcript_71775.known	chr19	+	506	6	FSM	ENSG00000104859.15	ENST00000591904.1	506	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	60.6517930485159	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCTCAGTGTCATCTG	8358	False	NA	46	True	AATAAA	-25	NA	45068419	45070955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45068481_45069065_45069125_45069201_45069249_45069943_45070105_45070536_45070562_45070802
transcript_71779.known	chr19	+	576	3	FSM	ENSG00000142252.11	ENST00000591747.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	145	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGGCACTGTATCCCA	-9	True	NA	NA	False	CATAAA	-27	NA	45079257	45090537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45079280_45079906_45080030_45090106
transcript_71783.known	chr19	+	848	2	FSM	ENSG00000142252.11	ENST00000591607.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	3500	False	NA	-32	True	ATTAAA	-30	NA	45079194	45090869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45079280_45090106
transcript_71784.known	chr19	+	716	2	FSM	ENSG00000142252.11	ENST00000391951.2	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	0	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATGCTCTACCTCAC	2	True	NA	NA	False	AGTAAA	-35	NA	45079268	45090713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45079378_45090106
transcript_71786.known	chr19	+	1653	3	FSM	ENSG00000142252.11	ENST00000270257.9	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	62	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGAAAGTGCGGCGGCC	-7	True	NA	NA	False	AGTAAA	-22	NA	45079259	45091518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45079378_45079906_45080030_45090106
transcript_71791.known	chr19	-	695	5	FSM	ENSG00000007255.10	ENST00000588062.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	259.259522486639	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	3	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178134
transcript_71797.known	chr19	-	758	6	FSM	ENSG00000007255.10	ENST00000585934.1	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_5	177.73080768398	3137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	3	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178134
transcript_71798.known	chr19	-	805	6	FSM	ENSG00000007255.10	ENST00000006275.8	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_5	167.378134772735	2860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	3	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178092
transcript_71799.known	chr19	-	1556	8	FSM	ENSG00000104879.5	ENST00000221476.4	1556	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.57428457234194	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGCGATAGTTATTG	0	True	NA	0	True	AATAAA	-17	NA	45322875	45306412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45306929_45307460_45307651_45308408_45308533_45311748_45311921_45315464_45315598_45317824_45317980_45319520_45319732_45322820
transcript_718.nnic	chr1	+	832	3	FSM	ENSG00000217801.11	ENST00000692821.1	722	3	-14	-96	-1	-2	multi-exon	FALSE	canonical	1	1	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCTTCAGTCTCTTGCCT	1232	False	NA	12	True	NA	NA	NA	1059685	1066447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1065829
transcript_71801.known	chr19	-	4108	23	FSM	ENSG00000104884.17	ENST00000391945.10	4108	23	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_22	17.778713244442	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	0	True	NA	-67	True	AATAAA	-16	NA	45370573	45349836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_71810.nic	chr19	-	1449	2	ISM	ENSG00000104884.17	ENST00000682414.1	3110	24	18866	-576	6770	0	3prime_fragment	FALSE	canonical	1	3	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	NA	False	NA	-67	True	AATAAA	-16	NA	45351722	45349836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45351031_45351467
transcript_71811.known	chr19	-	2853	22	FSM	ENSG00000104884.17	ENST00000391944.8	2853	22	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_21	17.929946826393	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGTCTTGCCTGGCC	-15	True	NA	-8	True	CATAAA	-14	NA	45370588	45351593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_71812.nic	chr19	-	1166	5	ISM	ENSG00000104881.16	ENST00000587270.5	2512	6	7045	0	-19	0	3prime_fragment	TRUE	canonical	3	48	junction_2	12.6169528809455	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	5121	False	NA	-4	True	AATAAA	-18	NA	45386122	45379637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45380229_45382526_45382727_45385561_45385729_45385823_45385958_45386048
transcript_71816.nic	chr19	-	861	3	ISM	ENSG00000104881.16	ENST00000585905.1	2176	7	-94	2822	-54	548	5prime_fragment	FALSE	canonical	3	11	junction_2	1.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAAAGCAAGC	NA	False	NA	NA	False	AAGAAA	-37	NA	45406403	45397474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45398148_45398263_45398340_45406291
transcript_71817.known	chr19	-	355	2	FSM	ENSG00000104881.16	ENST00000589371.1	355	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTTCTTCTCTTTTGA	8651	False	NA	-4	True	AATAAA	-18	NA	45382592	45379637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45379927_45382526
transcript_71821.known	chr19	-	1453	10	FSM	ENSG00000012061.16	ENST00000589165.5	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	100.162090854996	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCAAGGAAACCCCCA	14	True	NA	-62	True	NA	NA	NA	45424367	45409667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_71840.known	chr19	-	738	7	FSM	ENSG00000012061.16	ENST00000589381.5	738	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	116.77138157766	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGCTCTGGGAAAGAA	42	True	NA	NA	False	NA	NA	NA	45423485	45413676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45423269
transcript_71849.known	chr19	+	1830	3	FSM	ENSG00000117877.11	ENST00000589804.1	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	90	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGAGTGGGGTTTTGGTT	21	False	NA	13	True	ATTAAA	-21	NA	45406690	45409786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45406725_45407093_45407236_45408132
transcript_71862.known	chr19	+	1061	2	FSM	ENSG00000117877.11	ENST00000592852.1	1061	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGCAGCTGAAAGAACC	14	False	NA	NA	False	AAGAAA	-4	NA	45406661	45408619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45407236_45408132
transcript_71863.known	chr19	-	836	6	FSM	ENSG00000012061.16	ENST00000591636.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	160.481276166411	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTGCTGGCTGCGCTG	26	True	NA	-13	True	AATAAA	-17	NA	45423501	45409618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_71864.known	chr19	-	949	9	FSM	ENSG00000012061.16	ENST00000340192.11	949	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	127.644770750705	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	13	True	NA	-8	True	AATAAA	-22	NA	45423839	45409613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_71865.known	chr19	-	1278	8	FSM	ENSG00000012061.16	ENST00000013807.9	1278	8	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	75.338691038184	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGAGCTTGCTAC	-39	True	NA	1	True	AATAAA	-17	NA	45423566	45413433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_71868.known	chr19	-	2111	10	FSM	ENSG00000125744.12	ENST00000591286.5	2111	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	39.4107837595652	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	255	False	NA	-4	True	AATAAA	-16	NA	45497055	45485293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494117_45494421_45494525_45495006_45495094_45495140_45496791
transcript_71869.known	chr19	-	2063	10	FSM	ENSG00000125744.12	ENST00000344680.8	2063	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_6	22.5684145064143	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	255	False	NA	-4	True	AATAAA	-16	NA	45497055	45485293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45496791
transcript_71872.known	chr19	-	546	6	FSM	ENSG00000125744.12	ENST00000588036.5	546	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	53.1827039553274	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTCCCACCCACCCCCCT	-2	True	NA	NA	False	NA	NA	NA	45493238	45485637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45493159
transcript_71878.known	chr19	+	895	5	FSM	ENSG00000213889.11	ENST00000396735.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	28.8227340826647	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	928	False	NA	54	True	ATTAAA	-45	NA	45499609	45502510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45499726_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_71889.nic	chr19	+	1022	4	NIC	ENSG00000213889.11	novel	895	5	NA	NA	-185	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	39.2965930103644	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	743	False	NA	57	True	AATACA	-19	NA	45499424	45502513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_45499726_45499948_45500067_45500455_45500562_45502016
transcript_71894.nnic	chr19	+	796	4	NIC	ENSG00000213889.11	novel	895	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	45.9081208018315	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACATGTTTTGCCTAGT	912	False	NA	57	True	AATACA	-19	NA	45499593	45502513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_45499726_45500455_45500562_45500649_45500711_45502016
transcript_71910.known	chr19	-	1127	7	FSM	ENSG00000125744.12	ENST00000430715.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	25.8698666405531	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	4043	False	NA	-4	True	AATAAA	-16	NA	45493267	45485293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159
transcript_71911.known	chr19	+	872	5	FSM	ENSG00000213889.11	ENST00000396737.6	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.4626276242015	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	-13	True	NA	54	True	ATTAAA	-45	NA	45497250	45502510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45497344_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_71912.known	chr19	+	618	4	FSM	ENSG00000213889.11	ENST00000456399.6	618	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.2363912388207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCGAAAAAAAAAAAAAA	-2	True	NA	NA	False	AAAAAG	-11	NA	45497230	45502302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45497344_45499953_45500067_45500455_45500562_45502016
transcript_71913.known	chr19	+	2242	13	FSM	ENSG00000125753.14	ENST00000245932.11	2242	13	0	0	0	0	multi-exon	TRUE	canonical	3	671	junction_6	88.183008882412	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	12	True	NA	13	True	AATAAA	-19	NA	45507478	45526983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
transcript_71917.known	chr19	-	2250	2	FSM	ENSG00000125741.5	ENST00000323060.3	2250	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	7572	False	NA	NA	False	NA	NA	NA	45584842	45527426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45529457_45584622
transcript_71918.nnic	chr19	-	796	2	NNC	ENSG00000125741.5	novel	2250	2	NA	NA	-24	-29231	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGTAAGACTCCTGGC	7548	False	NA	NA	False	AATAAA	-44	NA	45584866	45582114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_45582667_45584622
transcript_71923.known	chr19	-	2234	19	FSM	ENSG00000125746.18	ENST00000245925.8	2234	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_18	18.8863560393329	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	2	True	NA	25	True	AATAAA	-15	NA	45639397	45609399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_71928.nic	chr19	-	1094	8	ISM	ENSG00000125746.18	ENST00000588610.5	1087	10	-19	5229	-13	313	5prime_fragment	FALSE	canonical	3	9	junction_7	16.5307382207344	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGTTGTGAGG	6173	False	45639426	NA	False	NA	NA	NA	45639416	45626391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_71931.nic	chr19	-	816	5	ISM	ENSG00000125746.18	ENST00000588308.5	2062	17	22515	0	-381	0	3prime_fragment	TRUE	canonical	3	10	junction_4	33.9300751546471	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	NA	False	NA	25	True	AATAAA	-15	NA	45616876	45609399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616764
transcript_71934.known	chr19	-	705	4	FSM	ENSG00000125746.18	ENST00000592433.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	3.74165738677394	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCAGGGAAGAGTCAGG	710	False	NA	NA	False	NA	NA	NA	45616152	45609661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801
transcript_71939.known	chr19	+	886	3	FSM	ENSG00000267757.4	ENST00000623430.1	886	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCGTGGTGGCGCGTG	48	False	NA	NA	False	AATAAA	-35	NA	45641690	45642840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45641767_45641878_45642073_45642224
transcript_71940.known	chr19	+	838	2	FSM	ENSG00000267757.4	ENST00000591087.1	838	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTCTACTAAAATAAAATT	2980	False	NA	NA	False	NA	NA	NA	45641493	45642789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45641767_45642224
transcript_71941.nic	chr19	+	1217	2	NIC	ENSG00000267757.4	novel	886	3	NA	NA	-22	0	intron_retention	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCGTGGTGGCGCGTG	2958	False	NA	NA	False	AATAAA	-35	NA	45641471	45642840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_45642073_45642224
transcript_71942.nic	chr19	-	1451	2	ISM	ENSG00000125746.18	ENST00000586195.5	1952	17	-21	28083	-13	2934	5prime_fragment	FALSE	canonical	3	9	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATCCAAAAT	6173	False	45639426	NA	False	NA	NA	NA	45639416	45637482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45638874_45639356
transcript_71943.known	chr19	-	2362	1	FSM	ENSG00000125746.18	ENST00000588420.1	2362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAAAGAGA	2811	False	NA	NA	False	AAAACA	-9	NA	45642778	45640416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45640400_45642800
transcript_71944.known	chr19	-	2791	22	FSM	ENSG00000125746.18	ENST00000536630.5	2791	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	20.4251856446099	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGTCAGGGTCTATG	-13	True	NA	23	True	AATAAA	-13	NA	45643727	45609401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45643578
transcript_71957.known	chr19	+	2125	7	FSM	ENSG00000011478.13	ENST00000012049.10	2125	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	3.90156663690654	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGTAAAAGACTAAAAGACT	-4	True	NA	7	True	AATAAA	-30	NA	45692665	45703987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45692911_45693412_45693557_45695436_45695719_45698546_45698700_45698800_45698901_45701797_45701915_45702903
transcript_71971.known	chr19	+	1814	6	FSM	ENSG00000011478.13	ENST00000366382.8	1814	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.00285656000464	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAGACTAAAAGACTAT	27	True	NA	9	True	AATAAA	-32	NA	45692696	45703989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45692911_45693412_45693557_45698546_45698700_45698800_45698901_45701797_45701915_45702903
transcript_72.known	ERCC-00170	+	1007	1	FSM	ERCC-00170A	DQ516773	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00170_+_0_1000
transcript_72003.known	chr19	-	596	4	FSM	ENSG00000125743.11	ENST00000587367.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4005.0528918688	2398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	1	True	NA	-19	True	AATAAA	-17	NA	45691940	45687461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45690571_45690668_45691886
transcript_72006.known	chr19	-	702	4	FSM	ENSG00000125743.11	ENST00000588301.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	3697.11151516364	21035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	601	False	NA	-20	True	AATAAA	-16	NA	45692316	45687462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45691886_45691993_45692165
transcript_72016.known	chr19	-	379	3	FSM	ENSG00000125743.11	ENST00000585392.2	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	4253.5	1557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	24	True	NA	-17	True	AATAAA	-19	NA	45691917	45687459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688467_45691886
transcript_72018.known	chr19	-	805	3	FSM	ENSG00000125743.11	ENST00000588599.5	805	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	4245.5	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	1146	False	NA	-20	True	AATAAA	-16	NA	45691771	45687462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45691411
transcript_72022.known	chr19	-	515	3	FSM	ENSG00000125743.11	ENST00000342669.8	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	6943	junction_2	785	31576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-12	True	NA	-17	True	AATAAA	-19	NA	45691953	45687459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45691886
transcript_72023.known	chr19	-	615	4	FSM	ENSG00000125743.11	ENST00000391932.7	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	3932.58543737097	2449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	0	True	NA	-20	True	AATAAA	-16	NA	45691941	45687462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45689232_45689348_45691886
transcript_72024.known	chr19	-	454	3	FSM	ENSG00000125743.11	ENST00000590212.1	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3456.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGCTGCCATTGGTGT	24	True	NA	-68	True	NA	NA	NA	45691917	45687510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687754_45688386_45688567_45691886
transcript_72025.nnic	chr19	-	436	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-44	-10086	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGAAAAAGCCAGAGT	2236	False	NA	NA	False	AAAAAG	-17	NA	45730940	45723541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_45723886_45730848
transcript_72026.nnic	chr19	-	311	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-44	-10211	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATTAGTTGGGCTTGG	2236	False	NA	NA	False	AAGAAA	-7	NA	45730940	45723666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_45723886_45730848
transcript_72027.known	chr19	-	2995	1	FSM	ENSG00000279407.1	ENST00000623179.1	2995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAAAGCCG	NA	False	NA	NA	False	AATAAA	-24	NA	45717381	45714386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45714400_45717400
transcript_72028.known	chr19	-	2993	2	FSM	ENSG00000177051.6	ENST00000317683.4	2993	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGTGCAGACTGGTTT	0	True	NA	-10	True	TATAAA	-15	NA	45730896	45710628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45713574_45730848
transcript_72029.known	chr19	-	1809	2	FSM	ENSG00000177045.11	ENST00000560160.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCTGCCGCTGTGTCT	1486	False	NA	-111	True	NA	NA	NA	45768627	45764888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45766112_45768041
transcript_72030.known	chr19	-	643	2	FSM	ENSG00000185800.12	ENST00000598237.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGCCTCAGCCTCC	503	False	NA	NA	False	NA	NA	NA	45792437	45790566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45791088_45792315
transcript_72037.known	chr19	-	995	4	FSM	ENSG00000125755.19	ENST00000598364.1	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_3	71.4345076898336	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTGAACTTGGGC	NA	False	NA	12	True	AAAAAG	-4	NA	45817133	45815467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797
transcript_72041.nic	chr19	-	1298	3	ISM	ENSG00000125755.19	ENST00000598364.1	995	4	-63	-20	-63	0	intron_retention	FALSE	canonical	3	382	junction_2	35.5	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTACTGAAAAGAAAAAA	NA	False	NA	-6	True	AATAAA	-17	NA	45817196	45815447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45815698_45815850_45816184_45816481
transcript_72043.known	chr19	-	4077	27	FSM	ENSG00000125755.19	ENST00000245934.12	4077	27	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_18	39.3996365585616	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGCGCGGGTGCCGTCTC	6	True	NA	32	True	AAAAAG	-13	NA	45863147	45815409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_72044.known	chr19	-	1899	12	FSM	ENSG00000125755.19	ENST00000598896.5	1899	12	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	19.7383714066061	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTTATGTCTAAAAT	66	False	NA	NA	False	NA	NA	NA	45863132	45831169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_72045.known	chr19	+	1923	2	FSM	ENSG00000170608.3	ENST00000302177.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTCTCTTTTCCTTG	-1	True	NA	33	True	ATTAAA	-21	NA	45864325	45873797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45864526_45872074
transcript_72047.nnic	chr19	+	724	6	NIC	ENSG00000104983.8	novel	1282	10	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	33.921084888311	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCTCAGCTTATGACTAA	-5	True	NA	14	True	AATAAA	-17	NA	45995456	46018615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_45995505_46016693_46016834_46016990_46017070_46017246_46017305_46018077_46018151_46018289
transcript_72052.known	chr19	-	708	3	FSM	ENSG00000008438.5	ENST00000008938.5	708	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCCTCAGCAGGTCCC	-1	True	NA	NA	False	AATAAA	-15	NA	46023053	46019152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46019420_46019525_46019648_46022734
transcript_72054.nnic	chr19	-	584	4	NNC	ENSG00000188624.3	novel	680	4	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.63299316185545	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTCATGCAACCTGATT	8621	False	NA	1	True	AATAAA	-25	NA	46124705	46120066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_46120358_46123885_46124044_46124267_46124322_46124624
transcript_72055.known	chr19	-	680	4	FSM	ENSG00000188624.3	ENST00000341415.3	680	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.63299316185545	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTCATGCAACCTGATT	-11	True	NA	1	True	AATAAA	-25	NA	46124688	46120066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46120358_46123885_46124157_46124267_46124322_46124624
transcript_72062.nnic	chr19	-	482	2	NNC	ENSG00000277748.1	novel	286	3	NA	NA	448	13577	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGAACCACACGCCGTCT	518	False	NA	-30	True	AATAAA	-16	NA	46249715	46235816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_46235905_46249321
transcript_72068.known	chr19	+	5856	15	FSM	ENSG00000124440.16	ENST00000377670.9	5856	15	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_14	32.6921322370396	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGTGTTGACTCATC	-10	True	NA	16	True	CATAAA	-25	NA	46297041	46343433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46339524
transcript_7207.known	chr1	+	896	7	FSM	ENSG00000122406.14	ENST00000645300.1	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	2287.3291132284	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCAGGAGCGGGCTGC	-1	True	NA	-15	True	NA	NA	NA	92832012	92841835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92832118_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_72081.known	chr19	+	2101	13	FSM	ENSG00000124440.16	ENST00000244302.8	2101	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	26.2900488144596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	55	True	NA	NA	NA	46297045	46331513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155
transcript_72082.known	chr19	+	1929	12	FSM	ENSG00000011485.15	ENST00000391919.1	1929	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	263.369457368124	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCTGGATGGTGGA	23	False	NA	22	True	AATAAA	-18	NA	46347107	46390852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_72083.known	chr19	-	3236	1	FSM	ENSG00000169515.8	ENST00000307522.5	3236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCCTGTGTGGCTCTG	7	True	NA	-5	True	AAAACA	-42	NA	46413564	46410328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46410300_46413600
transcript_72084.known	chr19	-	3684	3	FSM	ENSG00000182013.18	ENST00000313683.15	3684	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	8	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGTTAAGTCTCTTG	-37	True	NA	-13	True	AATAAA	-15	NA	46471563	46466502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46468578_46469732_46471115_46471336
transcript_72088.known	chr19	-	965	4	FSM	ENSG00000230510.8	ENST00000602017.6	973	4	0	8	0	-8	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGGACATGGGGCCTCT	-7	True	NA	NA	False	AATACA	-10	NA	46600932	46480795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46481441_46525662_46525785_46526924_46527073_46600882
transcript_72090.known	chr19	-	611	2	FSM	ENSG00000230510.8	ENST00000595691.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATAGCAAGTCCTATGT	5813	False	NA	NA	False	AATATA	-16	NA	46490120	46481084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46481441_46489865
transcript_72095.known	chr19	+	1355	7	FSM	ENSG00000160014.17	ENST00000599839.5	1355	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2377.03852280288	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGGATGTGGGGATGGT	13	False	NA	NA	False	NA	NA	NA	46602068	46609996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46602091_46602596_46602640_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_72098.known	chr19	+	702	6	FSM	ENSG00000160014.17	ENST00000391918.6	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	2011.77298918143	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	NA	False	NA	27	True	GATAAA	-22	NA	46601073	46609305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46601177_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_72103.known	chr19	+	540	6	FSM	ENSG00000160014.17	ENST00000594523.5	540	6	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_2	1986.11584757788	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGATCTCTCTCTTCT	29	True	NA	-96	True	NA	NA	NA	46601365	46609182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46601438_46605826_46605858_46608204_46608341_46608481_46608589_46608845_46608982_46609124
transcript_72112.known	chr19	+	1203	6	FSM	ENSG00000160014.17	ENST00000596362.1	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	1967.7311808273	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACTGACAGTGGGCAAC	16	False	NA	NA	False	NA	NA	NA	46602071	46609770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46602211_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_72122.known	chr19	+	880	7	FSM	ENSG00000160014.17	ENST00000602169.2	880	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	2327.62854997671	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCATGATTGCTCTTT	10	True	NA	25	True	GATAAA	-20	NA	46601346	46609303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46601438_46605826_46605858_46605993_46606186_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_72123.known	chr19	+	577	5	FSM	ENSG00000160014.17	ENST00000597743.5	577	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2185.69188130441	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCCTTCTTCCCTGAG	11	True	NA	41	True	GATAAA	-36	NA	46601275	46609319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46601438_46605826_46605858_46608196_46608328_46608923_46608982_46609124
transcript_72126.known	chr19	-	216	2	ISM	ENSG00000167414.5	ENST00000693335.1	435	3	1517	123	1517	-61	3prime_fragment	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCGGACAGCTTACCC	4469	False	NA	NA	False	NA	NA	NA	46634685	46634075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_46634205_46634598
transcript_72128.known	chr19	-	2352	1	FSM	ENSG00000279161.1	ENST00000624917.1	2352	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-7	True	NA	NA	False	NA	NA	NA	46639161	46636809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46636800_46639200
transcript_72129.known	chr19	-	2923	17	FSM	ENSG00000105287.13	ENST00000600194.5	2923	17	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_16	27.1632075379547	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACGGCACTCTCGAAT	-27	True	NA	-11	True	ATTAAA	-35	NA	46714324	46674319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862
transcript_72130.known	chr19	-	1682	10	FSM	ENSG00000105287.13	ENST00000597589.5	1682	10	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	21.4775219850262	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGCCCCATGGCCTT	1	True	NA	-37	True	ATTAAA	-9	NA	46697341	46674345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156
transcript_72131.known	chr19	-	669	2	FSM	ENSG00000105287.13	ENST00000593363.1	669	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCAGCTGGCCTGTTCCA	-1	True	NA	NA	False	NA	NA	NA	46717112	46716164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46716536_46716814
transcript_72132.known	chr19	-	1043	5	FSM	ENSG00000105287.13	ENST00000602155.5	1043	5	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	7.90569415042095	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACACGGCACTCTCGAATC	7633	False	NA	-10	True	ATTAAA	-36	NA	46689709	46674318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536
transcript_72136.known	chr19	-	1750	8	FSM	ENSG00000105281.12	ENST00000412532.6	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	341.178150842408	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTTTTTAGCAATAA	1252	False	NA	-5	True	NA	NA	NA	46787342	46774923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787238
transcript_72137.known	chr19	-	2882	8	FSM	ENSG00000105281.12	ENST00000542575.6	2882	8	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_7	92.0651942918712	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTTCTTGAGAATTT	0	True	NA	-5	True	AATAAA	-21	NA	46788594	46774882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787399
transcript_72140.known	chr19	-	2031	7	FSM	ENSG00000105281.12	ENST00000594991.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_3	74.254068350944	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	3689	False	NA	-7	True	AATAAA	-19	NA	46784905	46774884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516
transcript_72144.known	chr19	+	383	3	FSM	ENSG00000181027.11	ENST00000600681.5	383	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	14	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATCTCGGCTCACTGCAA	6	True	NA	NA	False	NA	NA	NA	46746057	46748802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46746091_46748026_46748089_46748514
transcript_72147.known	chr19	-	1872	7	FSM	ENSG00000105281.12	ENST00000434726.6	1872	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	373.796624739532	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	-43	True	NA	-7	True	AATAAA	-19	NA	46784824	46774884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784594
transcript_72165.known	chr19	-	898	5	FSM	ENSG00000042753.12	ENST00000601498.5	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	810.213243535305	3785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-10	True	NA	-5	True	AATAAA	-28	NA	46850316	46838157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850133
transcript_72166.known	chr19	-	829	5	FSM	ENSG00000042753.12	ENST00000599990.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_4	885.091909069335	2490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	9142	False	NA	-5	True	AATAAA	-28	NA	46850769	46838157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850655
transcript_72176.known	chr19	-	636	4	FSM	ENSG00000042753.12	ENST00000593442.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	942.575549580333	2168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	16	True	NA	-5	True	AATAAA	-28	NA	46850834	46838157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46850763
transcript_72184.known	chr19	-	789	5	FSM	ENSG00000042753.12	ENST00000263270.11	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_4	302.386342284171	21703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTTTGAGCCCTT	4	True	NA	-14	True	AATAAA	-19	NA	46850846	46838166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850763
transcript_72185.known	chr19	-	554	2	FSM	ENSG00000042753.12	ENST00000597421.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_1	0	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTTTTGCTGGTGCG	25	True	NA	-3	True	ATTAAA	-22	NA	46850825	46845650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46846143_46850763
transcript_72186.known	chr19	-	707	4	FSM	ENSG00000042753.12	ENST00000597020.5	707	4	0	0	0	0	multi-exon	FALSE	canonical	3	1716	junction_3	208.606487594865	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGCCGTCTTTGAG	-2	True	NA	-19	True	AATAAA	-14	NA	46846148	46838171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992
transcript_72187.known	chr19	-	793	5	FSM	ENSG00000042753.12	ENST00000352203.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	862.019540091754	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	9134	False	NA	17	True	NA	NA	NA	46850777	46838135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839621_46845992_46846143_46850763
transcript_72188.known	chr19	+	9290	7	FSM	ENSG00000160007.19	ENST00000672722.1	9290	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	14.3575377028545	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGAAGTGAAGGGGG	-1	True	NA	22	True	AATAAA	-22	NA	46860996	47005077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46861210_46918487_46922357_46937263_46937409_46987988_46988067_46989543_46989676_46999303_46999410_47000330
transcript_72191.nic	chr19	+	816	2	ISM	ENSG00000130751.10	ENST00000594257.1	498	5	-44	6151	-23	-4007	5prime_fragment	FALSE	canonical	3	55	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTAGCTGGGTATG	-12	True	NA	NA	False	AATACA	-9	NA	47035305	47036726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_47035359_47035963
transcript_72196.known	chr19	+	1341	8	FSM	ENSG00000130751.10	ENST00000439365.6	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	29.0959005458059	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTGGGCTCCGGGCT	11	True	NA	10	True	ATTAAA	-17	NA	47035328	47045758	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47041024_47041126_47042809_47042905_47045190
transcript_72197.known	chr19	-	655	3	FSM	ENSG00000130748.7	ENST00000253047.7	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	1017	junction_2	15	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGAGTATTGGTTCGT	-10	True	NA	-7	True	ATTAAA	-20	NA	47048624	47045908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47046253_47046592_47046686_47048406
transcript_722.known	chr1	+	540	2	FSM	ENSG00000217801.11	ENST00000433695.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATACCTGCCGGTTATTC	22	False	NA	-65	True	NA	NA	NA	1064494	1066274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1064590_1065829
transcript_72207.known	chr19	+	2106	9	FSM	ENSG00000142230.13	ENST00000596995.1	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	1078.71740246229	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTTTCTTCCA	29	True	NA	22	True	AATAAA	-16	NA	47130888	47210190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47131113_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_72223.known	chr19	+	2522	9	FSM	ENSG00000142230.13	ENST00000270225.12	2522	9	0	0	0	0	multi-exon	FALSE	canonical	3	3073	junction_8	183.386502706715	4756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGCAGTTAGTCGGG	-25	True	NA	26	True	AATAAA	-22	NA	47130834	47210636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_72224.known	chr19	+	1851	8	FSM	ENSG00000142230.13	ENST00000392776.3	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	1139.44585529232	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	35	True	NA	2	True	TTTAAA	-10	NA	47130894	47210170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47203670_47203741_47209158
transcript_72225.known	chr19	+	570	5	FSM	ENSG00000142230.13	ENST00000597808.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	1418.57294049337	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGATTCTTCTGAGAC	NA	False	NA	NA	False	NA	NA	NA	47130781	47155177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47130859_47143493_47143606_47150201_47150376_47152897_47153041_47155113
transcript_72226.known	chr19	+	2211	10	FSM	ENSG00000142230.13	ENST00000414294.6	2211	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	1399.69923577077	2161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	-1	True	NA	23	True	AATAAA	-17	NA	47130858	47210191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47180145_47180304_47197232_47197378_47203670_47203741_47209158
transcript_72227.known	chr19	+	2027	12	FSM	ENSG00000105321.14	ENST00000221922.11	2027	12	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_1	28.1407325143871	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	-19	True	NA	18	True	AATAAA	-18	NA	47256524	47271953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
transcript_72228.known	chr19	-	628	1	FSM	ENSG00000286669.1	ENST00000671594.1	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGCTTGTAATCCCAG	903	False	NA	NA	False	AATAAA	-21	NA	47256477	47255849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47255800_47256500
transcript_72230.known	chr19	+	4338	17	FSM	ENSG00000134815.19	ENST00000328771.9	4338	17	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_1	41.6810339812966	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGCTCACTCCCGTA	2	True	NA	18	True	AATAAA	-27	NA	47349314	47382704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47349353_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_72232.known	chr19	-	1758	13	FSM	ENSG00000105419.18	ENST00000441740.6	1758	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	42.9291244054922	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	200	False	NA	-13	True	GATAAA	-17	NA	47419315	47403123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414816_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_72233.known	chr19	-	2021	13	FSM	ENSG00000105419.18	ENST00000558555.6	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_8	34.1258903017766	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-12	True	NA	-13	True	GATAAA	-17	NA	47419527	47403123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_72239.known	chr19	-	1636	12	FSM	ENSG00000118162.14	ENST00000338134.8	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	24.4310464994411	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	10	True	NA	-15	True	NA	NA	NA	47484219	47475149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
transcript_7224.known	chr1	+	1028	8	FSM	ENSG00000122406.14	ENST00000370321.8	1028	8	0	0	0	0	multi-exon	FALSE	canonical	3	5357	junction_6	445.802463805096	128554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTTAAGCTCTTAT	-1	True	NA	35	True	AATAAA	-18	NA	92832039	92841924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_72248.nic	chr19	-	1001	5	ISM	ENSG00000118162.14	ENST00000594208.5	1623	13	4089	-43	3505	0	3prime_fragment	FALSE	canonical	3	160	junction_3	25.4950975679639	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	8219	False	NA	-15	True	NA	NA	NA	47480073	47475149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862
transcript_7225.known	chr1	+	629	6	FSM	ENSG00000122406.14	ENST00000645119.1	629	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	2515.7884330762	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTAAGCTCTTA	16	False	NA	34	True	AATAAA	-17	NA	92832056	92841923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92840550_92840640_92841765
transcript_72251.nnic	chr19	-	914	4	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3516	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	91.9710099252295	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	8230	False	NA	-15	True	NA	NA	NA	47480062	47475149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_47475545_47476531_47476715_47476802_47476939_47479862
transcript_72257.nnic	chr19	-	759	3	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3535	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	109	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	8249	False	NA	-15	True	NA	NA	NA	47480043	47475149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_47475545_47476531_47476715_47479862
transcript_7226.known	chr1	+	733	4	FSM	ENSG00000122406.14	ENST00000646852.1	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	5895	junction_1	123.348647697852	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTAGACCTTCTGGAATC	14	False	NA	NA	False	ATTAAA	-23	NA	92832085	92835293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778
transcript_72267.nic	chr19	-	1379	12	NIC	ENSG00000105402.8	novel	1662	11	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	186.646525871324	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTCTCTCTTCCTCCT	7120	False	NA	-9	True	AATAAA	-15	NA	47515129	47487641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_47487891_47488234_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_7227.known	chr1	+	271	2	FSM	ENSG00000122406.14	ENST00000644549.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	3	6864	junction_1	0	1940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGTGTTAAGCTCT	1474	False	NA	32	True	AATAAA	-15	NA	92840524	92841921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92840640_92841765
transcript_72273.known	chr19	-	1662	11	FSM	ENSG00000105402.8	ENST00000263354.8	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_9	35.8023742229478	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTCCTCCTCACCT	-40	True	NA	-4	True	AATAAA	-20	NA	47515063	47487636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_72280.known	chr19	-	1460	10	FSM	ENSG00000105402.8	ENST00000595227.5	1460	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	227.180517770167	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGCCCAAGAAAGAAAAT	3	True	NA	-46	True	NA	NA	NA	47515020	47487678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47503422_47503503_47514842
transcript_72288.known	chr19	-	1417	9	FSM	ENSG00000105402.8	ENST00000594001.5	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_8	180.415795802363	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGCCCAAGAAAGAAAA	-35	True	NA	-47	True	NA	NA	NA	47515058	47487679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47514842
transcript_72297.known	chr19	+	1753	3	FSM	ENSG00000268061.5	ENST00000593284.5	1753	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGACAAGTTATTT	-10	True	NA	NA	False	TTTAAA	-13	NA	47484281	47496382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47484525_47493446_47493602_47495027
transcript_723.known	chr1	+	565	2	FSM	ENSG00000217801.11	ENST00000451054.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTGCCTTCAGTCTC	-1	True	NA	6	True	NA	NA	NA	1064517	1066441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1064590_1065948
transcript_72301.known	chr19	+	1215	3	FSM	ENSG00000024422.12	ENST00000540884.1	1215	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	45.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTGGCAGGGCCCCCAG	NA	False	NA	NA	False	NA	NA	NA	47729616	47741865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47729682_47736368_47736534_47740880
transcript_72302.known	chr19	+	1504	13	FSM	ENSG00000105373.19	ENST00000246802.10	1504	13	0	0	0	0	multi-exon	TRUE	canonical	3	882	junction_12	121.15035997562	4999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGCTCCACGTGTGG	3	True	NA	27	True	AATAAA	-18	NA	47745545	47757058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47745784_47746966_47747032_47750177_47750287_47750907_47751108_47751519_47751591_47752511_47752608_47754526_47754632_47754708_47754892_47755347_47755524_47755755_47755823_47756527_47756605_47756687_47756745_47756998
transcript_72307.known	chr19	+	303	5	FSM	ENSG00000105373.19	ENST00000594182.1	303	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	555.907816099036	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGGGCTCCACGTGTG	9629	False	NA	26	True	AATAAA	-17	NA	47755473	47757057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47755524_47755755_47755823_47756527_47756605_47756687_47756745_47757005
transcript_72321.known	chr19	+	881	7	NNC	ENSG00000178980.16	novel	758	6	NA	NA	-92	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1477.11156766621	5047	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGTGAGGAGTGT	31	False	NA	42	True	AATAAA	-20	NA	47778584	47784684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_47778815_47780119_47780132_47780733_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_72339.known	chr19	+	717	5	FSM	ENSG00000178980.16	ENST00000601419.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1315.61135978677	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAATAAATATTGGATG	-13	True	NA	12	True	NA	NA	NA	47778690	47784654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47778815_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_72346.known	chr19	+	758	6	FSM	ENSG00000178980.16	ENST00000601048.6	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_4	139.999142854519	44213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGCCTGTGAGGAGT	-1	True	NA	40	True	AATAAA	-18	NA	47778702	47784682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_72347.known	chr19	+	2437	5	FSM	ENSG00000178980.16	ENST00000598273.5	2437	5	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_3	152.663641709478	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTGCCTGTGAGGAG	195	False	NA	39	True	AATAAA	-17	NA	47778932	47784681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_72348.known	chr19	+	636	6	FSM	ENSG00000178980.16	ENST00000599874.5	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1247.09672439631	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCGGAATCCACACCAC	6	False	NA	NA	False	NA	NA	NA	47778682	47784457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47781001_47781107_47781183_47781289_47781389_47784289
transcript_72349.known	chr19	+	674	4	FSM	ENSG00000178980.16	ENST00000601937.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_2	150.471112030036	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGAGGAGTGTAT	263	False	NA	44	True	AATAAA	-22	NA	47780814	47784686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47780918_47781107_47781183_47781289_47781389_47784289
transcript_72350.known	chr19	+	312	3	FSM	ENSG00000178980.16	ENST00000599627.1	312	3	0	0	0	0	multi-exon	FALSE	canonical	3	2940	junction_1	173	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATTGACGCCCCCGG	528	False	NA	NA	False	NA	NA	NA	47781079	47784399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47781183_47781289_47781389_47784289
transcript_72353.known	chr19	-	876	3	FSM	ENSG00000105499.14	ENST00000594790.1	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGTGTGTCT	7013	False	NA	-3	True	AATAAA	-23	NA	48055059	48047845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48048389_48052996_48053148_48054877
transcript_72354.known	chr19	-	3957	28	FSM	ENSG00000105486.14	ENST00000601091.5	3957	28	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	106.455114287782	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGAGGGGGTGGCTT	96	False	NA	-86	True	NA	NA	NA	48170252	48115523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48120166_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_72355.known	chr19	-	3125	28	FSM	ENSG00000105486.14	ENST00000263274.12	3125	28	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_22	62.5211075468828	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGACAGGGTCTGTGC	4	True	NA	-7	True	AATAAA	-18	NA	48170344	48115444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_72357.known	chr19	-	3027	27	FSM	ENSG00000105486.14	ENST00000427526.6	3027	27	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_25	122.397813918677	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTGTGACAGGGTC	4	True	NA	-12	True	AATAAA	-13	NA	48170344	48115449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151337_48153871_48153968_48157013_48157141_48161371_48161508_48165549_48165624_48170240
transcript_72366.nic	chr19	-	882	8	ISM	ENSG00000105486.14	ENST00000263274.12	3125	28	-24	34643	-24	44	5prime_fragment	FALSE	canonical	3	322	junction_2	50.5165157878781	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTTCCCTTGCTCACC	-20	True	NA	NA	False	NA	NA	NA	48170368	48150087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_72368.known	chr19	-	602	4	FSM	ENSG00000105486.14	ENST00000600055.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	16.779617264871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGTCTTGGATGCC	4	True	NA	NA	False	NA	NA	NA	48170344	48161173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48161508_48162261_48162352_48165549_48165624_48170240
transcript_72369.known	chr19	-	5610	14	FSM	ENSG00000105483.18	ENST00000651546.1	5610	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	21.5137220556181	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAGAAGTTAAATTGAT	-13	True	NA	NA	False	AATAAA	-38	NA	48255912	48208085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_72375.known	chr19	-	1903	12	FSM	ENSG00000105483.18	ENST00000521613.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	15.9077921547797	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCATGTACCTATTG	NA	False	NA	NA	False	NA	NA	NA	48255946	48211565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249750_48249848_48255791
transcript_72387.known	chr19	-	579	6	FSM	ENSG00000105483.18	ENST00000521437.1	579	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	37.4112282610448	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAACTGTTGGTTGACAA	2	True	NA	NA	False	NA	NA	NA	48255897	48238474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48238533_48240961_48241064_48242539_48242645_48249522_48249634_48249750_48249848_48255791
transcript_72391.known	chr19	-	614	5	FSM	ENSG00000105483.18	ENST00000520007.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	7.92148975887743	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTGGTTTATGTACA	1	True	NA	-6	True	ATTAAA	-14	NA	48255898	48238335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_72397.known	chr19	-	500	4	FSM	ENSG00000105483.18	ENST00000519332.5	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	28.003967972811	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTTTATGTACATT	6	True	NA	-4	True	ATTAAA	-16	NA	48255893	48238333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48238533_48240961_48241064_48249750_48249848_48255791
transcript_72403.known	chr19	+	1969	2	FSM	ENSG00000268001.1	ENST00000602172.1	1969	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGGTCTTCTCACCTA	-23	True	NA	NA	False	AATAAA	-23	NA	48255674	48258199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48255795_48256350
transcript_72404.known	chr19	-	4296	15	FSM	ENSG00000105483.18	ENST00000519940.6	4296	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	23.7928989578052	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTATGTTGAATCAATC	26	True	NA	-48	True	AATAAA	-6	NA	48255873	48209667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48238382_48238533_48240961_48241064_48246074_48246382_48249522_48249634_48249750_48249848_48255791
transcript_72405.known	chr19	+	2499	6	FSM	ENSG00000178150.10	ENST00000595607.6	2499	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	39.3883231427793	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGGTGCAGTGACTCAC	-1	True	NA	15	True	AATAAA	-18	NA	48270080	48287608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48270220_48271244_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_72414.nnic	chr19	+	580	4	NNC	ENSG00000178150.10	novel	2499	6	NA	NA	-1	-5028	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	37.0944739819828	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAATTCTGTAGTTTTC	NA	False	NA	NA	False	AATAAA	-21	NA	48270079	48277377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48270220_48271286_48271450_48271726_48271829_48277202
transcript_72416.nnic	chr19	+	699	4	NNC	ENSG00000178150.10	novel	2206	5	NA	NA	-157	-5028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.4514441512262	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAATTCTGTAGTTTTC	817	False	NA	NA	False	AATAAA	-21	NA	48270898	48277377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48271116_48271244_48271450_48271726_48271829_48277202
transcript_72420.known	chr19	-	437	3	FSM	ENSG00000268186.1	ENST00000600941.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTATGATACTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	48271283	48262899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48263185_48270144_48270234_48271220
transcript_72422.nnic	chr19	-	609	3	NNC	ENSG00000268186.1	novel	437	3	NA	NA	-567	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTATGATACTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	48271850	48262899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_48263185_48270144_48270234_48271615
transcript_72424.known	chr19	+	2206	5	FSM	ENSG00000178150.10	ENST00000315849.5	2206	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	7.58287544405155	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCTGGTGCAGTGACTC	25	True	NA	13	True	AATAAA	-16	NA	48271396	48287606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48271450_48271726_48271829_48279730_48279809_48282370_48282498_48285760
transcript_72428.known	chr19	+	683	6	FSM	ENSG00000142227.11	ENST00000597279.5	683	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	108.213862328262	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	17	True	NA	30	True	AATAAA	-14	NA	48325580	48330553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48325990_48326054_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_72429.nic	chr19	+	1128	5	NIC	ENSG00000142227.11	novel	753	4	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	92.1964614288423	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	2988	False	NA	30	True	AATAAA	-14	NA	48321439	48330553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48321978_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_72434.known	chr19	+	761	4	FSM	ENSG00000142227.11	ENST00000596315.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.1264925525243	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	18	False	NA	30	True	AATAAA	-14	NA	48325346	48330553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48327520_48327624_48329351_48329493_48330300
transcript_72439.known	chr19	+	263	3	FSM	ENSG00000142227.11	ENST00000594198.1	263	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	119	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGCACCCGCGAGGGG	-20	True	NA	NA	False	NA	NA	NA	48325543	48330355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48329351_48329493_48330300
transcript_72441.known	chr19	+	649	5	FSM	ENSG00000142227.11	ENST00000270221.11	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	25.7196422992234	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	-12	True	NA	30	True	AATAAA	-14	NA	48325551	48330553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_72442.known	chr19	+	667	5	FSM	ENSG00000142227.11	ENST00000599255.5	667	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	93.6028845709362	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTAACCGCGGGCTCTG	-3	True	NA	16	True	NA	NA	NA	48325560	48330539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48326829_48326923_48327520_48327665_48329351_48329493_48330300
transcript_72443.known	chr19	+	502	5	FSM	ENSG00000142227.11	ENST00000593437.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	93.186305324334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTCCAAAAAATAAAACCT	44	False	NA	1	True	NA	NA	NA	48325607	48330524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48326829_48326923_48327520_48327562_48329351_48329493_48330300
transcript_72445.known	chr19	-	2263	8	FSM	ENSG00000161558.11	ENST00000293261.8	2263	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	15.1064251771441	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTACTCTTAACGC	-10	True	NA	-15	True	AATAAA	-19	NA	48363940	48332355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_72447.known	chr19	-	2272	7	FSM	ENSG00000161558.11	ENST00000435956.7	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	26.560727065015	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATGAGGCTACTCTT	-8	True	NA	-20	True	AATAAA	-14	NA	48364059	48332360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48363290_48363532_48363897
transcript_72450.known	chr19	-	1960	6	FSM	ENSG00000161558.11	ENST00000377431.6	1960	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	39.5272058208014	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	-8	True	NA	-16	True	AATAAA	-18	NA	48363938	48332356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48363290_48363532_48363897
transcript_72453.known	chr19	-	583	3	FSM	ENSG00000161558.11	ENST00000593914.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGCCTGGTGGTGATA	-8	True	NA	NA	False	AATAAA	-8	NA	48363938	48359875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48360177_48363290_48363532_48363897
transcript_72467.known	chr19	-	1550	5	FSM	ENSG00000105438.9	ENST00000330720.7	1550	5	0	0	0	0	multi-exon	TRUE	canonical	3	902	junction_4	108.308298389366	11958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-12	True	NA	-25	True	AATAAA	-16	NA	48391551	48382574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
transcript_72468.known	chr19	-	1594	4	FSM	ENSG00000105438.9	ENST00000597017.5	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_2	68.7071078322081	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTCTTTTGCTGCTC	25	True	NA	-28	True	AATAAA	-13	NA	48390855	48382577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423
transcript_72471.known	chr19	+	4443	12	FSM	ENSG00000105443.16	ENST00000452733.7	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_8	22.7407232925377	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	3	True	NA	28	True	ATTAAA	-17	NA	48469368	48482314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_72478.known	chr19	+	4652	11	FSM	ENSG00000105443.16	ENST00000493260.5	4652	11	0	0	0	0	multi-exon	TRUE	canonical	3	272	junction_10	15.9878078547373	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCCTGCTGACCCCCT	16	False	NA	36	True	NA	NA	NA	48469346	48479382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48478146_48478274_48478347_48478437_48478593_48479122
transcript_72479.nic	chr19	-	716	2	ISM	ENSG00000142235.13	ENST00000648216.1	2222	5	7101	0	7101	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGGCCTGTGCGTATTT	-2	True	NA	-5	True	AAAAAG	-24	NA	48491304	48485270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_48485790_48491107
transcript_72480.known	chr19	-	454	1	FSM	ENSG00000142235.13	ENST00000598924.1	454	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATGTATCTTTTGTATG	-22	True	NA	-24	True	AATAAA	-18	NA	48513660	48513206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48513200_48513700
transcript_72482.nnic	chr19	+	828	5	NNC	ENSG00000088002.12	novel	1423	2	NA	NA	-2041	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_3	3.57071421427143	195	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTCCTTGATGCGCT	NA	False	NA	6	True	AATAAA	-14	NA	48589059	48599423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48589196_48591608_48591736_48592721_48592817_48596738_48596920_48599134
transcript_72483.nnic	chr19	+	658	4	NNC	ENSG00000088002.12	novel	1423	2	NA	NA	-1998	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.2565175405668	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTCCTTGATGCGCT	25	False	NA	6	True	AATAAA	-14	NA	48589102	48599423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48589196_48592721_48592817_48596738_48596920_48599134
transcript_72491.known	chr19	-	1111	7	FSM	ENSG00000063177.13	ENST00000550973.5	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	1863.44746967072	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGCTACAAAAACTA	167	False	NA	-67	True	NA	NA	NA	48619127	48615392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48618559
transcript_72497.known	chr19	-	559	6	FSM	ENSG00000063177.13	ENST00000552588.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1951.23403004355	8399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-1	True	NA	-5	True	ATTAAA	-17	NA	48619181	48615330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48619140
transcript_72501.known	chr19	-	3844	1	FSM	ENSG00000063177.13	ENST00000547892.1	3844	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTGTGTGTGTTATT	5	True	NA	-6	True	ATTAAA	-16	NA	48619175	48615331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615300_48619200
transcript_72502.known	chr19	-	628	7	FSM	ENSG00000063177.13	ENST00000549370.5	628	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	1748.49487655336	5644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTGCTCTGTGTGTGT	4	True	NA	-10	True	ATTAAA	-12	NA	48619176	48615335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617416_48617790_48617878_48619140
transcript_72503.known	chr19	-	1645	5	FSM	ENSG00000063177.13	ENST00000552347.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_4	655.959221293519	4627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGTGTTATTGGGG	131	False	NA	-2	True	ATTAAA	-20	NA	48619163	48615327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48617424_48617790_48617878_48619140
transcript_72504.known	chr19	-	666	2	FSM	ENSG00000063177.13	ENST00000549533.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	4690	junction_1	0	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	2869	False	NA	-5	True	ATTAAA	-17	NA	48616425	48615330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876
transcript_72505.known	chr19	-	2091	4	FSM	ENSG00000063177.13	ENST00000551749.5	2091	4	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_3	757.400965289999	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-3	True	NA	-5	True	ATTAAA	-17	NA	48619183	48615330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615947_48616078_48617424_48617790_48617878_48619140
transcript_72506.known	chr19	-	1036	6	FSM	ENSG00000063177.13	ENST00000549273.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	3652	junction_5	620.377111118713	2266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACTCTCTTATTAAAA	3	True	NA	-40	True	NA	NA	NA	48619177	48615365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_72507.known	chr19	-	463	6	FSM	ENSG00000063177.13	ENST00000550645.5	463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1932.44657364699	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	131	False	NA	-5	True	ATTAAA	-17	NA	48619163	48615330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615906_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_72508.known	chr19	-	440	5	FSM	ENSG00000063177.13	ENST00000547897.5	440	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2086.99836787191	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGTGTGTGTTATTGG	126	False	NA	-4	True	ATTAAA	-18	NA	48619168	48615329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_72509.known	chr19	+	2748	7	FSM	ENSG00000063176.16	ENST00000245222.9	2748	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	64.8650308118498	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	46	True	NA	34	True	AATAAA	-23	NA	48619505	48630405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48619544_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_72510.known	chr19	+	2136	7	FSM	ENSG00000063176.16	ENST00000600537.5	2136	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	82.2671799011543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACGTGATGCTGGAAGG	-8	True	NA	NA	False	NA	NA	NA	48619451	48629916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48619544_48620401_48620554_48626067_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_72511.known	chr19	+	2866	7	FSM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	70.6456336623542	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	-2	True	NA	34	True	AATAAA	-23	NA	48619533	48630405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48619690_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_72519.known	chr19	+	2683	6	FSM	ENSG00000063176.16	ENST00000599748.5	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	37.2580192710241	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	68	False	NA	34	True	AATAAA	-23	NA	48624951	48630405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48625077_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_72528.known	chr19	-	712	3	FSM	ENSG00000105516.11	ENST00000593500.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	41.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACGTGATAATGCAGAT	5748	False	NA	-81	True	NA	NA	NA	48634526	48630730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48631053_48633443_48633656_48634348
transcript_72529.known	chr19	-	709	3	FSM	ENSG00000105516.11	ENST00000599385.5	709	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	48.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGAGCCTCCCCCCTCCCTT	10005	False	NA	-35	True	GATAAA	-24	NA	48634636	48630684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48631053_48633443_48633656_48634507
transcript_72532.nic	chr19	+	533	2	ISM	ENSG00000063176.16	ENST00000601712.5	1394	6	-210	8021	-51	-5545	5prime_fragment	FALSE	canonical	3	39	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTGGAGGCCAGGCG	3094	False	NA	NA	False	TTTAAA	-10	NA	48619239	48620630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_48619544_48620401
transcript_72533.nic	chr19	+	385	2	ISM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	9775	0	-5545	5prime_fragment	FALSE	canonical	3	19	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTGGAGGCCAGGCG	-2	True	NA	NA	False	TTTAAA	-10	NA	48619533	48620630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_48619690_48620401
transcript_72534.nic	chr19	+	1647	2	ISM	ENSG00000063176.16	ENST00000599748.5	2683	6	-572	3565	37	26	5prime_fragment	FALSE	canonical	3	101	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGCAGAGGTCGCGTG	-4	True	NA	NA	False	NA	NA	NA	48624379	48626840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_48625077_48625890
transcript_72535.known	chr19	+	1786	1	FSM	ENSG00000063176.16	ENST00000598574.1	1786	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	0	True	NA	NA	False	NA	NA	NA	48625028	48626814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48625000_48626800
transcript_72544.known	chr19	-	1715	9	FSM	ENSG00000063180.9	ENST00000084798.9	1715	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_8	43.015803781866	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	-12	True	NA	-17	True	ATTAAA	-21	NA	48646187	48637945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
transcript_72574.known	chr19	-	275	2	FSM	ENSG00000063180.9	ENST00000594088.1	275	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTGGTCTGATTCTA	8002	False	NA	-5	True	ATTAAA	-21	NA	48638385	48638015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48638145_48638239
transcript_72575.known	chr19	-	381	2	FSM	ENSG00000063180.9	ENST00000599267.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGGTCTGATTCTAG	7249	False	NA	-4	True	ATTAAA	-22	NA	48639138	48638014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48638145_48638887
transcript_72578.known	chr19	+	1593	3	FSM	ENSG00000176920.13	ENST00000391876.5	1593	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTAAATGTTTGCAG	49	False	NA	NA	False	NA	NA	NA	48696038	48705614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48696080_48702954_48704209_48705316
transcript_72579.known	chr19	+	312	2	FSM	ENSG00000176920.13	ENST00000522283.1	312	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGCCCTACGTTAT	43	False	NA	NA	False	AATAAA	-13	NA	48696032	48696643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48696080_48696378
transcript_72580.nnic	chr19	+	406	2	NNC	ENSG00000176920.13	novel	312	2	NA	NA	-56	2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGCCCTACGTTATTG	NA	False	NA	NA	False	AATAAA	-15	NA	48695914	48696645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48696080_48696404
transcript_72581.known	chr19	+	1449	2	FSM	ENSG00000176920.13	ENST00000522966.2	1449	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAATCCCAGCTACTC	-19	True	NA	NA	False	AATACA	-27	NA	48695970	48704294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48696080_48702954
transcript_72583.nic	chr19	-	982	3	ISM	ENSG00000176909.12	ENST00000356751.8	1825	8	2726	0	2612	0	3prime_fragment	FALSE	canonical	3	19	junction_1	2	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTCATGGATGTTCTTA	5703	False	NA	-4	True	NA	NA	NA	48714231	48712995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_48713551_48713715_48713771_48713859
transcript_72584.known	chr19	-	1858	10	FSM	ENSG00000176909.12	ENST00000318083.11	1858	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.23872218307405	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTGGCTCACGCCTGCG	-9	True	NA	0	True	ATTAAA	-18	NA	48719725	48712724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48713551_48713715_48713771_48713859_48714046_48714365_48714561_48714805_48714909_48715261_48715447_48715624_48715768_48716704_48716744_48718973_48719053_48719678
transcript_72586.known	chr19	-	3199	12	FSM	ENSG00000105538.10	ENST00000222145.9	3199	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	31.6700447668959	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	-8	True	NA	-21	True	AATAAA	-20	NA	48740610	48720584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48738959_48739646_48740145_48740287_48740520
transcript_72596.nnic	chr19	-	1113	5	NIC	ENSG00000105538.10	novel	3199	12	NA	NA	-3490	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	31.148836254345	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	12	True	NA	-21	True	AATAAA	-20	NA	48729071	48720584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48728936
transcript_72599.nnic	chr19	-	876	4	NIC	ENSG00000105538.10	novel	3199	12	NA	NA	-3497	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	34.1011567089577	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	5	True	NA	-21	True	AATAAA	-20	NA	48729078	48720584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_48720998_48721853_48722002_48724336_48724510_48728936
transcript_72602.known	chr19	-	437	2	FSM	ENSG00000182264.9	ENST00000599871.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGTTCCCCGAGAGG	5343	False	NA	NA	False	NA	NA	NA	48741523	48740851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48741029_48741263
transcript_72603.known	chr19	-	3425	2	FSM	ENSG00000174951.12	ENST00000645652.2	3425	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCTCTGTAGCTTTT	-2	True	NA	-5	True	ATTAAA	-16	NA	48752641	48748010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48751284_48752489
transcript_72604.known	chr19	+	893	3	FSM	ENSG00000105550.10	ENST00000222157.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGTGTGAGTGTCTG	15	False	NA	NA	False	AATAAA	-23	NA	48756086	48758333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48756472_48756925_48757030_48757929
transcript_72605.nic	chr19	+	1056	2	NIC	ENSG00000105550.10	novel	1347	4	NA	NA	288	0	intron_retention	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAGCATGTGTGAGTGT	303	False	NA	NA	False	AATAAA	-20	NA	48756374	48758330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48757030_48757929
transcript_72608.known	chr19	-	2041	12	FSM	ENSG00000105552.15	ENST00000402551.5	2041	12	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_11	152.001359280569	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCGGGCTTCTTCAG	-1	True	NA	-4	True	AATAAA	-15	NA	48811027	48795064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810983
transcript_72612.known	chr19	-	1579	11	FSM	ENSG00000105552.15	ENST00000597011.5	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_10	103.687463080162	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTTTGCTGCAAT	8	True	NA	-13	True	NA	NA	NA	48810916	48795109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810808
transcript_72621.known	chr19	-	1272	9	FSM	ENSG00000105552.15	ENST00000545387.6	1272	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	136.217140533047	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGGCTTCTTCAGTGA	41	False	NA	-1	True	AATAAA	-18	NA	48811012	48795061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
transcript_72627.known	chr19	-	1563	11	FSM	ENSG00000105552.15	ENST00000316273.11	1563	11	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_10	94.0372798415607	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-3	True	NA	-3	True	AATAAA	-16	NA	48811029	48795063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
transcript_72630.known	chr19	-	1050	9	FSM	ENSG00000087076.9	ENST00000263278.9	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	34.9979910137711	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	15	True	NA	-8	True	CATAAA	-19	NA	48836491	48813017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_72637.known	chr19	-	991	8	FSM	ENSG00000087076.9	ENST00000599157.5	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	92.9147074318316	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGGAGGAGGATATCG	-4	True	NA	-14	True	CATAAA	-13	NA	48836510	48813023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48832665_48832753_48834275_48834359_48835804_48835844_48836323
transcript_72638.nic	chr19	-	1375	8	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-403	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	72.4163134174862	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	NA	False	NA	-8	True	CATAAA	-19	NA	48836913	48813017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_72652.known	chr19	-	3073	20	FSM	ENSG00000105559.12	ENST00000263265.11	3073	20	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_12	19.6591453135642	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	-11	True	NA	-7	True	ATTAAA	-15	NA	48868617	48837096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48837552_48838016_48838130_48839204_48839264_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48857421_48857497_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
transcript_72653.known	chr19	+	2350	3	FSM	ENSG00000087074.8	ENST00000200453.6	2350	3	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	11.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGCAGCGTCTGTATGTG	1	True	NA	16	True	AATAAA	-16	NA	48872420	48876058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48872652_48873224_48874899_48875613
transcript_72657.known	chr19	+	2406	13	FSM	ENSG00000104805.16	ENST00000405315.9	2406	13	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	80.8783379870998	1162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGAGGCTCAATCCT	-20	True	NA	117	True	NA	NA	NA	48900311	48923372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48900373_48900785_48900932_48904346_48904455_48905752_48905886_48911148_48911253_48913010_48913197_48913473_48913565_48918725_48918785_48919029_48919123_48919193_48919287_48921153_48921325_48921826_48921933_48922317
transcript_72676.known	chr19	+	1064	7	FSM	ENSG00000104808.8	ENST00000221403.7	1064	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	5.52016505389306	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGTGGTTTGGCAGAA	2	True	NA	10	True	AATAAA	-21	NA	48933698	48944969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48933812_48934999_48935112_48936031_48936196_48939448_48939702_48942439_48942565_48944356_48944508_48944823
transcript_72677.nic	chr19	+	939	6	NIC	ENSG00000104808.8	novel	1064	7	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	5.74804314527997	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTAGTGGTTTGGCAGA	NA	False	NA	9	True	AATAAA	-20	NA	48933658	48944968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48933812_48934999_48935112_48939448_48939702_48942439_48942565_48944356_48944508_48944823
transcript_72678.known	chr19	+	776	5	FSM	ENSG00000104808.8	ENST00000522614.5	776	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.01338006955277	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCGTGGTAGTGGTTTG	8	True	NA	4	True	AATAAA	-15	NA	48933704	48944963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48933812_48934999_48935112_48936031_48936196_48939448_48939702_48944823
transcript_72680.known	chr19	+	715	5	FSM	ENSG00000104808.8	ENST00000520557.1	715	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.87386354243376	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTAGTGGTTTGGCAGA	61	False	NA	9	True	AATAAA	-20	NA	48933757	48944968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48933812_48934999_48935112_48939448_48939702_48944356_48944508_48944823
transcript_72681.known	chr19	+	634	5	FSM	ENSG00000104808.8	ENST00000523250.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.94172168845741	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATCTTCGTGGTAGTGG	5	True	NA	0	True	AATAAA	-11	NA	48933701	48944959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48933812_48934999_48935112_48942439_48942565_48944356_48944508_48944823
transcript_72682.nic	chr19	+	658	4	NIC	ENSG00000104808.8	novel	776	5	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	7.34846922834953	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCGTGGTAGTGGTTTG	NA	False	NA	4	True	AATAAA	-15	NA	48933658	48944963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48933812_48934999_48935112_48939448_48939702_48944823
transcript_72683.nic	chr19	+	846	3	ISM	ENSG00000104808.8	ENST00000520557.1	715	5	-99	4939	-40	-4930	5prime_fragment	FALSE	canonical	3	10	junction_2	4.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCAGTGAATCTTTG	NA	False	NA	11	True	AATAAA	-23	NA	48933658	48940029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_48933812_48934999_48935112_48939448
transcript_72692.nic	chr19	+	737	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	5	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	971.678630000681	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	-3	True	NA	17	True	AATAAA	-17	NA	48954879	48961798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48954963_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_727.known	chr1	-	2010	11	FSM	ENSG00000131591.18	ENST00000379325.7	2010	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	26.3901496774838	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	0	True	NA	-16	True	TATAAA	-16	NA	1116095	1081822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1082988_1083914_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_72701.known	chr19	+	383	4	FSM	ENSG00000087088.21	ENST00000506183.5	383	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	923.674305273359	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCTTGGACTGT	46	False	NA	NA	False	NA	NA	NA	48954928	48961639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48956197_48956334_48960809_48960915_48961531
transcript_72702.known	chr19	+	458	3	FSM	ENSG00000087088.21	ENST00000539787.2	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	1071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCCGATTCATCTAC	46	False	NA	NA	False	NA	NA	NA	48954928	48961097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48956197_48956334_48960809
transcript_72703.known	chr19	+	795	6	FSM	ENSG00000087088.21	ENST00000345358.12	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	170.653332812459	4513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	-8	True	NA	17	True	AATAAA	-17	NA	48954874	48961798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_72704.known	chr19	+	687	6	NNC	ENSG00000087088.21	novel	677	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1002.10350762783	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCGGCATCTGAGTCA	46	False	NA	14	True	AATAAA	-14	NA	48954928	48961795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48954965_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_72705.known	chr19	+	1358	5	FSM	ENSG00000087088.21	ENST00000293288.12	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	1783	junction_1	161.82706819318	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	46	False	NA	17	True	AATAAA	-17	NA	48954928	48961798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809
transcript_72717.known	chr19	+	871	4	FSM	ENSG00000087086.15	ENST00000331825.11	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	24196	junction_2	1762.03903349374	116029	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGGTTTTGTGTGTGG	0	True	NA	42	True	AATAAA	-14	NA	48965308	48966879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48965610_48965769_48965917_48966280_48966407_48966582
transcript_72732.known	chr19	-	3569	16	FSM	ENSG00000104812.15	ENST00000323798.8	3569	16	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_14	22.3232813199334	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGTGTGGTCAGACAT	-1	True	NA	-23	True	AATACA	-15	NA	48993309	48968129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48969612_48969774_48969856_48970545_48970710_48970927_48971024_48974212_48974340_48974619_48974734_48977923_48978003_48978097_48978158_48981529_48981637_48982254_48982376_48982719_48982838_48985460_48985606_48985849_48986036_48987193_48987386_48991301_48991484_48992994
transcript_72735.nnic	chr19	-	861	3	NNC	ENSG00000104812.15	novel	3569	16	NA	NA	0	-1922	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	81	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGGAAGAAAGAAAGAAAAAG	-2	True	NA	NA	False	AAAACA	-19	NA	48993310	48989115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_48989479_48991301_48991484_48992994
transcript_72743.nic	chr19	+	1898	15	NIC	ENSG00000183207.14	novel	1545	15	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	430.869339539381	3854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	NA	False	NA	17	True	TATAAA	-18	NA	48993468	49015926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48993903_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_72756.known	chr19	+	1641	14	FSM	ENSG00000183207.14	ENST00000601968.5	1641	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	517.446907204157	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGACTCTGTATAAAATG	28	False	NA	-17	True	NA	NA	NA	48993561	49015892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48993903_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015571_49015687_49015816
transcript_72757.known	chr19	+	1478	15	FSM	ENSG00000183207.14	ENST00000221413.10	1478	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	451.000588261529	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	13	True	NA	17	True	TATAAA	-18	NA	48993898	49015926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009872_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_72758.known	chr19	+	1563	15	FSM	ENSG00000183207.14	ENST00000596247.5	1563	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	450.23368648845	3147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTATGTGTGGTTG	12	True	NA	20	True	TATAAA	-21	NA	48993897	49015929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004206_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_72759.known	chr19	+	1853	13	FSM	ENSG00000183207.14	ENST00000594338.1	1853	13	0	0	0	0	multi-exon	FALSE	canonical	3	1308	junction_5	225.686160531734	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTCTGTATAAAATGGT	5433	False	NA	-15	True	NA	NA	NA	48999318	49015894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_72760.known	chr19	+	715	3	FSM	ENSG00000104818.15	ENST00000359342.7	715	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGGTGTCTTTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	49031889	49033238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49032105_49032503_49032672_49032906
transcript_72761.known	chr19	+	775	3	FSM	ENSG00000104818.15	ENST00000474913.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCCAGCCTTCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	49031911	49033154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49032271_49032503_49032672_49032906
transcript_72762.known	chr19	-	877	3	FSM	ENSG00000104827.12	ENST00000357383.4	877	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	10	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGTGTCTTTCTGT	-1	False	NA	NA	False	AATAAA	-17	NA	49024333	49022868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49023201_49023435_49023604_49023956
transcript_72763.known	chr19	+	877	3	FSM	ENSG00000189052.7	ENST00000301408.7	877	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	11.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGTGTCTTTCTGT	2	True	NA	NA	False	AATAAA	-17	NA	49043847	49045311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49044225_49044576_49044745_49044979
transcript_72764.known	chr19	-	887	3	FSM	ENSG00000213030.6	ENST00000448456.4	887	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	13.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGTGTCTTTCTGT	8631	False	NA	NA	False	AATAAA	-17	NA	49049111	49047637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49047970_49048204_49048373_49048724
transcript_72766.known	chr19	-	2151	5	FSM	ENSG00000196337.13	ENST00000684222.1	2151	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	8.7571399440685	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGGTGTCTTTCTGT	-7	True	NA	NA	False	AATAAA	-17	NA	49057749	49054273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49054606_49054840_49055009_49055360_49056596_49057120_49057249_49057461
transcript_72767.nic	chr19	-	1230	3	NIC	ENSG00000225950.8	novel	813	4	NA	NA	-18	-10	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	13.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCATGGATTTGATCATT	-24	True	NA	38	True	AATACA	-17	NA	49064859	49061075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49062010_49063738_49063863_49064687
transcript_72768.nic	chr19	-	1166	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	18	5283	18	-5283	5prime_fragment	FALSE	canonical	2	11	junction_2	10.5	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCATGGATTTGATCATT	7799	False	NA	38	True	AATACA	-17	NA	49065058	49061075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_49062010_49063738_49063863_49064950
transcript_7277.known	chr1	+	3845	13	FSM	ENSG00000143033.18	ENST00000540243.5	3845	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	170.289194378922	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	-8	True	NA	38	True	ATTAAA	-39	NA	93079234	93139079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_72770.nic	chr19	-	1114	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	18	5335	18	-5335	5prime_fragment	FALSE	canonical	2	11	junction_2	10.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTACTGTT	7799	False	NA	-14	True	NA	NA	NA	49065058	49061127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_49062010_49063738_49063863_49064950
transcript_72773.known	chr19	-	932	1	FSM	ENSG00000225950.8	ENST00000593537.1	932	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATCATTGGTGGCCCTT	2838	False	NA	48	True	AATACA	-27	NA	49061997	49061065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49061100_49062000
transcript_72774.known	chr19	+	1671	10	FSM	ENSG00000104852.15	ENST00000598441.6	1671	10	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_9	164.772570532841	3514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGCACCTCGGTTTCT	2	True	NA	20	True	AATAAA	-17	NA	49085450	49108604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107794
transcript_72775.known	chr19	+	1603	10	FSM	ENSG00000104852.15	ENST00000221448.9	1603	10	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_9	362.847687665836	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCCCTTGGATTTAAAA	2	True	NA	-7	True	NA	NA	NA	49085450	49108563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107821
transcript_72778.known	chr19	+	580	4	FSM	ENSG00000104852.15	ENST00000597936.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_1	36.4447831962576	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCATTTGTTTAGCCCCTG	2	True	NA	NA	False	NA	NA	NA	49085450	49090639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465
transcript_72779.nic	chr19	+	1254	2	ISM	ENSG00000104852.15	ENST00000597936.5	580	4	-279	3446	-247	-3446	5prime_fragment	FALSE	canonical	3	1577	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGGGGTTGATAGTA	NA	False	NA	NA	False	NA	NA	NA	49085171	49087193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_49085637_49086404
transcript_72782.known	chr19	+	746	6	FSM	ENSG00000104863.12	ENST00000221459.7	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	7.30479294709987	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	-7	True	NA	16	True	TTTAAA	-16	NA	49114369	49118460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49116262_49116473_49117854_49118019_49118351
transcript_72783.nnic	chr19	+	828	6	NNC	ENSG00000104863.12	novel	746	6	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	21.590738755309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	-16	True	NA	16	True	TTTAAA	-16	NA	49114360	49118460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_49114442_49114848_49114968_49115259_49115332_49116262_49116473_49117854_49118092_49118351
transcript_72785.known	chr19	+	582	5	FSM	ENSG00000104863.12	ENST00000391864.7	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.7313138121007	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	9679	False	NA	16	True	TTTAAA	-16	NA	49114323	49118460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49117854_49118019_49118351
transcript_72789.known	chr19	+	367	3	FSM	ENSG00000104863.12	ENST00000486217.2	367	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATACTAAGGCATCTTT	47	False	NA	NA	False	AGTAAA	-24	NA	49114423	49115489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49114442_49114848_49114968_49115259
transcript_72794.known	chr19	-	742	1	FSM	ENSG00000221916.4	ENST00000408991.4	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGTGAACGTCCAGAT	-23	True	NA	-16	True	AATAAA	-35	NA	49119143	49118401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49118400_49119100
transcript_72795.known	chr19	+	799	6	FSM	ENSG00000177380.14	ENST00000602905.1	799	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	21.5833268983259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCAGCGGGAGTGCGC	178	False	NA	NA	False	NA	NA	NA	49148572	49150354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
transcript_72798.known	chr19	+	980	2	FSM	ENSG00000177380.14	ENST00000602783.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	391	False	NA	5	True	NA	NA	NA	49149957	49151021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49150152_49150235
transcript_72799.known	chr19	-	2357	6	FSM	ENSG00000130528.12	ENST00000252825.9	2357	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	2.48193472919817	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGTCAGACGTGGGG	5	True	NA	-10	True	AATAAA	-15	NA	49155396	49151197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49151333_49151516_49151554_49152003_49152059_49152309_49152379_49153260_49153332_49153406
transcript_72800.known	chr19	+	3444	24	FSM	ENSG00000130529.16	ENST00000427978.6	3444	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	25.98239916102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCAGAACCAGTCCCA	14	True	NA	NA	False	NA	NA	NA	49157814	49211680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49157891_49158191_49158260_49166040_49166216_49167916_49168098_49168259_49168424_49168552_49168737_49171356_49171419_49171577_49171770_49172008_49172109_49181348_49181462_49182577_49182923_49183077_49183213_49188640_49188771_49188945_49189092_49190207_49190321_49190695_49190774_49200299_49200433_49200610_49200786_49201963_49202142_49210208_49210406_49210709_49210843_49211014_49211088_49211163_49211270_49211493
transcript_72807.known	chr19	+	1829	2	FSM	ENSG00000130529.16	ENST00000599628.5	1829	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAGTGCTCAAAACCTT	-9	True	NA	8	True	AATAAA	-19	NA	49157791	49159921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49157891_49158191
transcript_72809.known	chr19	-	2191	13	FSM	ENSG00000074219.14	ENST00000598810.5	2191	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	189.62235862073	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	11	True	NA	-8	True	GATAAA	-17	NA	49361495	49340594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49361395
transcript_72812.known	chr19	-	2175	13	FSM	ENSG00000074219.14	ENST00000593945.6	2175	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_12	180.753899604468	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	9	True	NA	-8	True	GATAAA	-17	NA	49362416	49340594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
transcript_72813.nic	chr19	-	2144	13	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_8	165.880730245157	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	0	True	NA	-8	True	GATAAA	-17	NA	49362425	49340594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_72823.known	chr19	-	1444	12	FSM	ENSG00000074219.14	ENST00000539846.5	1444	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	211.052380792107	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACAGATCACTCCGGA	-16	True	NA	NA	False	GATAAA	-33	NA	49362441	49341081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49362372
transcript_72827.known	chr19	-	2164	12	FSM	ENSG00000074219.14	ENST00000311227.6	2164	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_11	121.041554233411	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-32	True	NA	-8	True	GATAAA	-17	NA	49362457	49340594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_72851.nnic	chr19	+	1064	5	NIC	ENSG00000104901.7	novel	524	2	NA	NA	-133	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	8.8423695919137	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	1135	False	NA	6	True	AATAAA	-19	NA	49361649	49375116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49361907_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_72854.known	chr19	+	775	5	FSM	ENSG00000104901.7	ENST00000596402.1	775	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.0623058987491	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGATGGACTCCGCAAGGG	147	False	NA	NA	False	NA	NA	NA	49363729	49374899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49363915_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_72857.known	chr19	+	939	5	FSM	ENSG00000104901.7	ENST00000221498.7	939	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	8.44097150806707	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	20	True	NA	6	True	AATAAA	-19	NA	49363876	49375116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49364009_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_72861.known	chr19	+	664	4	FSM	ENSG00000104901.7	ENST00000597546.1	664	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.0332779621949	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTGTACATCCTCAGGC	5	False	NA	NA	False	NA	NA	NA	49363933	49374991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49364009_49364581_49364755_49365508_49365650_49374716
transcript_72867.known	chr19	+	524	2	FSM	ENSG00000104901.7	ENST00000594268.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	1268	False	NA	6	True	AATAAA	-19	NA	49361782	49375116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49361907_49374716
transcript_72868.known	chr19	+	500	2	FSM	ENSG00000104901.7	ENST00000598682.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	717	False	NA	6	True	AATAAA	-19	NA	49364654	49375116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49364755_49374716
transcript_72869.known	chr19	+	1259	8	FSM	ENSG00000104894.12	ENST00000323906.9	1259	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.349927106111883	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTATCCTCTGTCAGA	-34	True	NA	17	True	AATAAA	-22	NA	49335405	49340606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49335610_49335713_49335787_49336908_49337034_49337146_49337222_49337924_49338030_49338699_49338937_49339329_49339414_49340250
transcript_72870.known	chr19	-	2167	12	FSM	ENSG00000074219.14	ENST00000601519.5	2167	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	188.798156245375	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	18	True	NA	-8	True	GATAAA	-17	NA	49362407	49340594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362328
transcript_72871.known	chr19	+	1204	8	FSM	ENSG00000104894.12	ENST00000426897.6	1204	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAAATAAATCCCCTGCGT	6883	False	NA	-14	True	NA	NA	NA	49335395	49340575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49335576_49335713_49335787_49336908_49337034_49337146_49337222_49337924_49338030_49338699_49338937_49339329_49339414_49340250
transcript_72872.known	chr19	+	1849	4	FSM	ENSG00000261949.7	ENST00000610896.3	1849	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	19.6015872373189	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	3	True	NA	5	True	AATAAA	-16	NA	49425387	49428987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49425490_49426409_49427614_49427945_49428120_49428618
transcript_72873.nic	chr19	+	785	2	ISM	ENSG00000261949.7	ENST00000610896.3	1849	4	2316	0	2316	0	3prime_fragment	FALSE	canonical	3	51	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	1234	False	NA	5	True	AATAAA	-16	NA	49427703	49428987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_49428120_49428618
transcript_72875.nic	chr19	-	1867	3	ISM	ENSG00000104888.10	ENST00000600672.5	2024	10	4516	-1354	2997	0	3prime_fragment	FALSE	canonical	3	10	junction_1	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTTCTTGGCTGTGG	9891	False	NA	-2	True	AATAAA	-18	NA	49431664	49429400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_49430813_49431014_49431143_49431337
transcript_72876.known	chr19	+	3099	17	FSM	ENSG00000161618.10	ENST00000293350.9	3099	17	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_7	26.7575193870807	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTGTCAATTTCCAT	-39	True	NA	25	True	AATAAA	-18	NA	49453224	49471050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_7289.nic	chr1	+	1516	12	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-32	-10	intron_retention	FALSE	canonical	3	202	junction_3	117.128734714705	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAAAATCTGTAGG	NA	False	NA	NA	False	NA	NA	NA	93079202	93133730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702
transcript_72890.known	chr19	-	992	10	FSM	ENSG00000104872.11	ENST00000596049.5	992	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	292.334325772208	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTTCTGAGATGTGGA	-3	True	NA	-78	True	NA	NA	NA	49453494	49446368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484_49451579_49453392
transcript_72894.known	chr19	+	1046	9	FSM	ENSG00000090554.13	ENST00000204637.6	1046	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.72717802865893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	2	True	NA	6	True	TATAAA	-17	NA	49474235	49486231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49474282_49474602_49474673_49475673_49475802_49476144_49476199_49476422_49476567_49478908_49479048_49480297_49480477_49480551_49480621_49486014
transcript_72897.known	chr19	-	998	9	FSM	ENSG00000104872.11	ENST00000601807.5	998	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	321.91591972905	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGGTGCCTTCTTGAT	1890	False	NA	-110	True	NA	NA	NA	49451601	49446400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451367
transcript_72921.known	chr19	+	660	8	FSM	ENSG00000142541.18	ENST00000467825.2	660	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5902.79414985058	23441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCTGCCCTTCCTCCA	10	False	NA	28	True	AATAAA	-19	NA	49487633	49491843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490601_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_72922.known	chr19	-	1197	9	FSM	ENSG00000104872.11	ENST00000262265.10	1197	9	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_3	87.0972875582242	6155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCTGACTGGGGAT	1	True	NA	-7	True	AATAAA	-16	NA	49451814	49446297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484
transcript_72923.known	chr19	+	1032	9	FSM	ENSG00000090554.13	ENST00000601800.5	1032	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	5782	False	NA	6	True	TATAAA	-17	NA	49474206	49486231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49474282_49474602_49474673_49475690_49475802_49476116_49476199_49476422_49476567_49478962_49479048_49480297_49480477_49480551_49480621_49486014
transcript_72924.known	chr19	+	1342	8	FSM	ENSG00000142541.18	ENST00000679106.1	1342	8	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_7	5864.34805604587	3109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAATGATCCTTTATAGA	3199	False	NA	135	True	AATATA	-25	NA	49487509	49492427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491730
transcript_72925.known	chr19	+	1098	7	FSM	ENSG00000142541.18	ENST00000621674.4	1098	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6493.49342076787	3152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCTGGCGTCTTTG	3243	False	NA	9	True	AATAAA	-9	NA	49487553	49492301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49489913_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_72926.known	chr19	+	794	8	FSM	ENSG00000142541.18	ENST00000484279.5	794	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6114.36257294817	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCTGAGCCCAATAAAGA	2	True	NA	-8	True	AATACA	-28	NA	49487607	49491807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49490091_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_72927.known	chr19	+	850	7	FSM	ENSG00000142541.18	ENST00000479992.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	11170	junction_1	2451.17540965327	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGCCCTGGAATGTA	9	False	NA	46	True	AATAAA	-37	NA	49487614	49491861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_72928.known	chr19	+	796	8	FSM	ENSG00000142541.18	ENST00000477613.6	796	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6116.31155691275	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGCAGCAGCAGTCCAGG	1	True	NA	74	True	NA	NA	NA	49487624	49491889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49489923_49490126_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_72939.known	chr19	+	575	5	FSM	ENSG00000142534.7	ENST00000594493.1	575	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2877.42289210328	5994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	-3	True	NA	44	True	AATAAA	-19	NA	49496433	49499689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497172_49497326_49497519_49497596_49497916_49498047_49499511
transcript_72942.known	chr19	+	547	5	FSM	ENSG00000142534.7	ENST00000601306.1	547	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2877.42289210328	3242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGACTTGGGATCTTC	29	False	NA	43	True	AATAAA	-18	NA	49496465	49499688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496498_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_72946.known	chr19	+	573	5	FSM	ENSG00000142534.7	ENST00000270625.7	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	791.396352973654	44052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	-3	True	NA	63	True	AATAAA	-38	NA	49496433	49499708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_72947.known	chr19	+	944	4	FSM	ENSG00000142534.7	ENST00000600027.5	944	4	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	785.981057165007	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	2213	False	NA	44	True	AATAAA	-19	NA	49496364	49499689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497326_49497519_49498047_49499511
transcript_72948.known	chr19	+	1133	3	FSM	ENSG00000142534.7	ENST00000599167.5	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	921	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	2218	False	NA	44	True	AATAAA	-19	NA	49496369	49499689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49498047_49499511
transcript_72949.known	chr19	+	583	4	FSM	ENSG00000142534.7	ENST00000596873.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	843.797105680954	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATTTTGGAATGTTCTC	-5	True	NA	NA	False	NA	NA	NA	49496431	49498251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916
transcript_72950.known	chr19	+	751	4	FSM	ENSG00000142534.7	ENST00000602252.5	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	4871	junction_1	911.842944566418	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	-6	True	NA	44	True	AATAAA	-19	NA	49496430	49499689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497596_49497916_49498047_49499511
transcript_72951.known	chr19	+	430	5	FSM	ENSG00000142534.7	ENST00000599561.1	430	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2780.41278410239	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	17	False	NA	44	True	AATAAA	-19	NA	49496453	49499689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497283_49497580_49497596_49497916_49498047_49499511
transcript_72964.nic	chr19	+	1510	3	NIC	ENSG00000104870.13	novel	383	2	NA	NA	-10	0	intron_retention	FALSE	canonical	3	13	junction_1	94.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	7165	False	NA	21	True	AATATA	-20	NA	49506805	49526333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49506925_49524506_49525574_49526009
transcript_72968.nic	chr19	+	1615	3	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	-5	0	intron_retention	FALSE	canonical	3	23	junction_1	89.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	18	True	NA	21	True	AATATA	-20	NA	49513249	49526333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49513474_49524506_49525574_49526009
transcript_72970.known	chr19	+	660	3	FSM	ENSG00000104870.13	ENST00000599988.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	100.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	23	True	NA	21	True	AATATA	-20	NA	49513254	49526333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49513474_49525456_49525574_49526009
transcript_72971.known	chr19	+	582	2	FSM	ENSG00000104870.13	ENST00000593431.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCAGTCCTCCCTGAG	20	True	NA	NA	False	NA	NA	NA	49513397	49525012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49513474_49524506
transcript_72972.known	chr19	+	1351	5	FSM	ENSG00000104870.13	ENST00000452439.1	1351	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.5746847648032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGACTTCCCACTGCT	17	True	NA	NA	False	NA	NA	NA	49513394	49525164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49513474_49513881_49514134_49514210_49514487_49516113_49516200_49524506
transcript_72975.known	chr19	+	1469	7	FSM	ENSG00000142552.8	ENST00000270645.8	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	12.4632793972266	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	-9	True	NA	14	True	AATAAA	-15	NA	49528002	49543633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49528059_49528466_49528715_49534192_49534396_49537032_49537206_49539118_49539180_49542552_49542753_49543105
transcript_72997.known	chr19	+	1403	7	FSM	ENSG00000126460.11	ENST00000246794.10	1403	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	1.63299316185545	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGGCGCATCGGAACTG	-10	True	NA	4	True	AAAAAG	-40	NA	49581315	49591004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49581482_49583206_49583305_49583541_49583718_49583912_49583953_49588496_49588633_49589899_49590053_49590370
transcript_73.known	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27838	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00171_+_0_500
transcript_73002.known	chr19	+	1583	6	FSM	ENSG00000126460.11	ENST00000543867.2	1583	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.78885438199983	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGGCGCATCGGAACTG	-18	True	NA	4	True	AAAAAG	-40	NA	49581372	49591004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49581482_49583206_49583718_49583912_49583953_49588496_49588633_49589899_49590053_49590370
transcript_73007.known	chr19	+	443	3	FSM	ENSG00000126460.11	ENST00000596700.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTGGCACACGCGTT	21	False	NA	NA	False	NA	NA	NA	49581346	49590525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49581482_49589899_49590053_49590370
transcript_73008.known	chr19	-	1000	9	FSM	ENSG00000142546.14	ENST00000339093.7	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	184.001188854855	4762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-3	True	NA	-4	True	AATAAA	-18	NA	49580558	49555710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557080_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
transcript_73009.known	chr19	-	2615	8	FSM	ENSG00000142546.14	ENST00000598820.5	2615	8	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_7	68.6707613863991	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	36	False	NA	-4	True	AATAAA	-18	NA	49580535	49555710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557089_49558979_49559933_49560040_49560621_49560693_49580514
transcript_73010.nic	chr19	+	1215	6	ISM	ENSG00000126464.15	ENST00000418929.7	7416	14	24701	568	-4566	-568	3prime_fragment	TRUE	canonical	3	18	junction_1	6.01996677731696	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCCCTCTCCCCTTGCC	NA	False	NA	37	True	TATAAA	-16	NA	49615882	49625871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_49616220_49620351_49620478_49621524_49621623_49624843_49624991_49625104_49625201_49625460
transcript_73011.known	chr19	-	360	2	FSM	ENSG00000268636.1	ENST00000600665.1	360	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGAAGCCACCCCACCC	9158	False	NA	NA	False	NA	NA	NA	49626439	49625993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49626239_49626324
transcript_73012.known	chr19	-	986	6	FSM	ENSG00000126458.4	ENST00000246792.4	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	15.816447135814	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGCTTTCTAAAAAGG	-23	True	NA	-21	True	AATAAA	-18	NA	49640143	49635291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49635661_49635733_49635853_49636618_49636728_49636823_49636927_49637042_49637131_49639945
transcript_73018.known	chr19	+	4222	11	FSM	ENSG00000126461.15	ENST00000360565.8	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	38.8582037670297	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGCCCCATGGTTCT	-6	True	NA	15	True	ATTAAA	-18	NA	49642208	49658642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49642243_49645020_49645135_49645353_49645412_49646107_49646203_49646525_49646627_49646714_49646831_49650867_49653706_49654348_49654432_49654651_49654871_49657760_49657890_49658207
transcript_73019.known	chr19	+	662	7	FSM	ENSG00000126461.15	ENST00000598359.5	662	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.7478245178193	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCCCCTTCCCCTCCCCC	445	False	NA	NA	False	NA	NA	NA	49642659	49650998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49642707_49645020_49645135_49645353_49645412_49646107_49646203_49646525_49646627_49646714_49646831_49650867
transcript_73030.known	chr19	-	1468	8	FSM	ENSG00000126456.16	ENST00000598808.5	1468	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	186.356581612252	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTCCAACCCCCCTG	-7	True	NA	-65	True	NA	NA	NA	49665842	49659631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665630
transcript_73040.known	chr19	-	1741	8	FSM	ENSG00000126456.16	ENST00000597198.5	1741	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	148.452699812542	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGTGCGTGTCTGGT	-22	True	NA	-6	True	AATAAA	-16	NA	49665857	49659572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665483
transcript_73042.known	chr19	-	1556	8	FSM	ENSG00000126456.16	ENST00000601291.5	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	149.753811576309	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-22	True	NA	-5	True	AATAAA	-17	NA	49665802	49659571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660845_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_73043.nic	chr19	-	1554	8	NIC	ENSG00000126456.16	novel	1595	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_7	139.736486696516	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-22	True	NA	-5	True	AATAAA	-17	NA	49665857	49659571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665671
transcript_73049.known	chr19	+	1064	7	FSM	ENSG00000126453.10	ENST00000246784.8	1064	7	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_2	148.893324975374	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	0	True	NA	16	True	AATAAA	-39	NA	49665932	49673916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_73051.known	chr19	-	1494	8	FSM	ENSG00000126456.16	ENST00000593922.5	1494	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	181.969945937481	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664442_49664674_49665630
transcript_73052.known	chr19	-	1442	7	FSM	ENSG00000126456.16	ENST00000377135.8	1442	7	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	151.343703756273	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGCGTGTCTGGTGTT	NA	False	NA	-3	True	AATAAA	-19	NA	49665875	49659569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_73061.known	chr19	-	1055	7	FSM	ENSG00000126456.16	ENST00000599223.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	171.413162336567	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_73062.nic	chr19	+	803	6	NIC	ENSG00000126453.10	novel	1431	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_5	401.760127439247	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	NA	False	NA	16	True	AATAAA	-39	NA	49665920	49673916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669116_49673697
transcript_73063.known	chr19	+	1630	6	FSM	ENSG00000126453.10	ENST00000619007.4	1630	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	424.68039747556	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	NA	False	NA	15	True	AATAAA	-38	NA	49665141	49673915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49669023_49669165_49673697
transcript_73065.known	chr19	+	893	6	FSM	ENSG00000126453.10	ENST00000598979.5	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	350.397146107099	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	-33	True	NA	16	True	AATAAA	-39	NA	49665960	49673916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_73067.known	chr19	-	1117	6	FSM	ENSG00000126456.16	ENST00000599144.5	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	169.085303914917	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	104	False	NA	-12	True	AATAAA	-10	NA	49665731	49659578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49665630
transcript_73074.known	chr19	-	882	6	FSM	ENSG00000126456.16	ENST00000600022.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	212.32559902188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_73080.known	chr19	+	633	5	FSM	ENSG00000126453.10	ENST00000600947.5	633	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	445.535071571251	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	5	True	NA	16	True	AATAAA	-39	NA	49665998	49673916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49673697
transcript_73082.known	chr19	+	620	5	FSM	ENSG00000126453.10	ENST00000594157.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	508.219686749736	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	-33	True	NA	16	True	AATAAA	-39	NA	49665960	49673916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49673697
transcript_73085.known	chr19	-	710	5	FSM	ENSG00000126456.16	ENST00000596765.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	225.413508911955	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	130	False	NA	-12	True	AATAAA	-10	NA	49665705	49659578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49665630
transcript_73086.known	chr19	-	823	5	FSM	ENSG00000126456.16	ENST00000596822.5	823	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	203.981004017531	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	80	False	NA	-5	True	AATAAA	-17	NA	49665755	49659571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_73093.known	chr19	+	1259	3	FSM	ENSG00000126453.10	ENST00000611631.4	1259	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	612	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTGTCTGTTCTTAC	NA	False	NA	15	True	AATAAA	-38	NA	49665141	49673915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49673697
transcript_73095.known	chr19	-	2874	7	FSM	ENSG00000126456.16	ENST00000597636.5	2874	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	161.01311195745	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-22	True	NA	-8	True	AATAAA	-14	NA	49665857	49659574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661449_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673
transcript_73096.known	chr19	-	550	2	FSM	ENSG00000126456.16	ENST00000596644.5	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	4832	False	NA	-8	True	AATAAA	-14	NA	49661003	49659574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712
transcript_73097.known	chr19	-	924	6	FSM	ENSG00000126456.16	ENST00000593818.5	924	6	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_5	193.653711557512	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGACAGGGGAGTGATGA	-12	True	NA	NA	False	NA	NA	NA	49665847	49662174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665634
transcript_73122.known	chr19	+	1686	11	FSM	ENSG00000126457.22	ENST00000532489.5	1686	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1856.29609976426	5902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	9903	False	NA	28	True	AATAAA	-13	NA	49675896	49688447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49676261_49676345_49676440_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_73141.known	chr19	+	1393	10	FSM	ENSG00000126457.22	ENST00000391851.8	1393	10	0	0	0	0	multi-exon	FALSE	canonical	3	4181	junction_1	275.844964508045	30322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	84	False	NA	28	True	AATAAA	-13	NA	49677151	49688447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_73142.known	chr19	+	1328	11	FSM	ENSG00000126457.22	ENST00000454376.7	1328	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_2	1729.67530189917	7863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	4	True	NA	28	True	AATAAA	-13	NA	49677270	49688447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49677317_49679871_49679926_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_73143.known	chr19	+	1182	6	FSM	ENSG00000126457.22	ENST00000529284.5	1182	6	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	1846.85057327332	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTACAAAGACTACAAGAT	9792	False	NA	NA	False	NA	NA	NA	49675785	49684816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49676440_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753
transcript_73144.known	chr19	+	2846	20	FSM	ENSG00000169169.15	ENST00000598293.6	2846	20	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	57.4336181919175	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	-9	True	NA	11	True	AATAAA	-16	NA	49691115	49713731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_73153.known	chr19	+	1027	4	FSM	ENSG00000169169.15	ENST00000600944.5	1027	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	68.2104586311122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTAGGGAGGCTGAGGCA	23	False	NA	NA	False	AATACA	-42	NA	49691147	49697935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325
transcript_73156.known	chr19	+	2783	19	FSM	ENSG00000169169.15	ENST00000323446.9	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	57.3137617326818	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	-15	True	NA	11	True	AATAAA	-16	NA	49691109	49713731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_73157.known	chr19	+	2910	20	FSM	ENSG00000169169.15	ENST00000392518.8	2910	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	81.452907727627	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	-9	True	NA	11	True	AATAAA	-16	NA	49691115	49713731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691820_49691954_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_73158.known	chr19	+	2785	20	FSM	ENSG00000169169.15	ENST00000405931.6	2785	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	80.7642854614228	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	19	True	NA	11	True	AATAAA	-16	NA	49691143	49713731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705039_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_73159.known	chr19	+	700	3	FSM	ENSG00000169169.15	ENST00000599937.5	700	3	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	19	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	6595	False	NA	11	True	AATAAA	-16	NA	49712554	49713731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49712850_49712971_49713065_49713419
transcript_73160.known	chr19	+	2679	20	FSM	ENSG00000169169.15	ENST00000598259.5	2679	20	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	119.990742948578	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATCAAGCACAAAAAC	-13	True	NA	NA	False	NA	NA	NA	49691111	49713043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691660_49691771_49692238_49692394_49696481_49696603_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971
transcript_73164.known	chr19	+	3357	23	FSM	ENSG00000196961.13	ENST00000354293.10	3357	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	112.688996434237	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	-12	True	NA	16	True	AATAAA	-17	NA	49767000	49807114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_73174.known	chr19	-	1728	11	FSM	ENSG00000010361.14	ENST00000313777.9	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_9	34.4158393766591	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-10	True	NA	-6	True	AATAAA	-41	NA	49813292	49806865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_73175.known	chr19	-	1524	11	FSM	ENSG00000010361.14	ENST00000533418.5	1524	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	69.5589677899263	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	6977	False	NA	-30	True	AATAAA	-17	NA	49813249	49806889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49813132
transcript_73176.known	chr19	-	1632	11	FSM	ENSG00000010361.14	ENST00000377092.8	1632	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	61.9044424900184	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAACAAAAATAAAAATACA	9	True	NA	-60	True	NA	NA	NA	49813273	49806919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
transcript_73186.known	chr19	-	1483	10	FSM	ENSG00000010361.14	ENST00000525370.5	1483	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	92.5868294502751	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAAGTCCCAGGCATC	7070	False	NA	-33	True	AATAAA	-14	NA	49813156	49806892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808492_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
transcript_73187.known	chr19	-	1479	10	FSM	ENSG00000010361.14	ENST00000528094.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	71.7801857181242	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	0	True	NA	-30	True	AATAAA	-17	NA	49813175	49806889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812637_49812737_49812995
transcript_73191.nnic	chr19	-	1565	10	NIC	ENSG00000010361.14	novel	1728	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	40	junction_5	68.8446094252381	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	6899	False	NA	-6	True	AATAAA	-41	NA	49813327	49806865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_73207.known	chr19	+	520	2	FSM	ENSG00000269194.1	ENST00000600669.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATACGAAGTCACATCC	2678	False	NA	NA	False	NA	NA	NA	49808932	49809738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49809027_49809312
transcript_73208.known	chr19	+	611	7	FSM	ENSG00000196961.13	ENST00000594838.1	611	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	228.089711882554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAAGGTGAGAGACCGC	272	False	NA	NA	False	NA	NA	NA	49802521	49805933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49802600_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871
transcript_73209.known	chr19	+	2332	18	FSM	ENSG00000104973.19	ENST00000312865.10	2332	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_7	24.3428509929233	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGGCTCCCGTCACTG	-8	True	NA	17	True	AATAAA	-17	NA	49818288	49836979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_73215.known	chr19	-	1731	17	FSM	ENSG00000039650.12	ENST00000322344.8	1731	17	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_16	30.1080735642452	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-12	True	NA	-2	True	AATAAA	-17	NA	49867576	49861203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_73221.nic	chr19	-	1753	16	NIC	ENSG00000039650.12	novel	1731	17	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_15	64.2556007070374	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	9591	False	NA	-2	True	AATAAA	-17	NA	49867045	49861203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49866751
transcript_73222.known	chr19	-	1665	16	FSM	ENSG00000039650.12	ENST00000596014.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_7	22.7639090570042	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	10036	False	NA	-29	True	NA	NA	NA	49867286	49861230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053
transcript_73223.known	chr19	-	1723	16	FSM	ENSG00000039650.12	ENST00000593946.5	1723	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_15	68.7395729466578	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-3	True	NA	-2	True	AATAAA	-17	NA	49867234	49861203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866529_49867053
transcript_73232.known	chr19	+	1413	13	FSM	ENSG00000104960.15	ENST00000601638.5	1413	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	455.93447994202	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCCAATAAAGCCTTTT	111	False	NA	0	True	NA	NA	NA	49850827	49860713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_73233.known	chr19	+	1480	13	FSM	ENSG00000104960.15	ENST00000601612.5	1480	13	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	486.949254428928	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	18	True	NA	27	True	AATAAA	-15	NA	49850734	49860740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857908_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_73239.known	chr19	+	1438	13	FSM	ENSG00000104960.15	ENST00000598325.5	1438	13	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	361.055474346471	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTAAAAACCTGCCT	20	True	NA	12	True	NA	NA	NA	49851019	49860725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_73252.known	chr19	-	752	3	FSM	ENSG00000039650.12	ENST00000626274.2	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	28.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGGTACCTGTCCAAG	0	True	NA	NA	False	AGTAAA	-25	NA	49867564	49865953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49866446_49867053_49867218_49867468
transcript_73254.nic	chr19	-	1126	2	ISM	ENSG00000039650.12	ENST00000637897.1	190	3	-197	233	-35	-233	5prime_fragment	FALSE	canonical	3	26	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGATTCGGA	9591	False	NA	NA	False	AAAACA	-31	NA	49867045	49865613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_49866446_49866751
transcript_73255.known	chr19	-	619	2	FSM	ENSG00000039650.12	ENST00000629088.1	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAGAAAAGAAAAAA	8	True	NA	NA	False	NA	NA	NA	49867258	49866031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49866446_49867053
transcript_73260.known	chr19	+	1623	13	FSM	ENSG00000104973.19	ENST00000538643.5	1623	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	97.9459530670983	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTTTTTAACACACGC	45	False	NA	0	True	NA	NA	NA	49818341	49836962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49818476_49818570_49818617_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_73261.known	chr19	+	522	6	FSM	ENSG00000104960.15	ENST00000601093.5	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	546.235626813191	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTTCTCTGCTCACTG	917	False	NA	29	True	AATAAA	-17	NA	49857906	49860742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49857978_49858056_49858115_49858548_49858654_49860093_49860184_49860267_49860337_49860613
transcript_73262.known	chr19	+	1875	12	FSM	ENSG00000104960.15	ENST00000391842.5	1875	12	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_1	101.941402711444	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTGCCTGCCTTCTC	8	True	NA	20	True	AATAAA	-8	NA	49851158	49860733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49851500_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267
transcript_73263.known	chr19	-	2111	14	FSM	ENSG00000039650.12	ENST00000594661.5	2111	14	0	0	0	0	multi-exon	TRUE	canonical	3	220	junction_7	23.1066475232413	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-20	True	NA	-2	True	AATAAA	-17	NA	49867010	49861203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864404_49865126_49865427_49866398
transcript_73264.known	chr19	+	1742	13	FSM	ENSG00000104946.14	ENST00000599049.6	1742	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_12	102.48644896874	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGTGTGGTGGTTCAT	70	False	NA	NA	False	AAAAAG	-4	NA	49878186	49885534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49885171
transcript_73266.known	chr19	+	1637	4	FSM	ENSG00000169136.13	ENST00000595125.5	1637	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.9938250421547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATCAACCCT	NA	False	NA	NA	False	NA	NA	NA	49928701	49933298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49929007_49929242_49929401_49930731_49931029_49932421
transcript_73272.known	chr19	+	2007	3	FSM	ENSG00000169136.13	ENST00000423777.7	2007	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	6	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCATCTTGTCTTTGA	1	True	NA	11	True	AATAAA	-19	NA	49929204	49933935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49929401_49930731_49931029_49932421
transcript_73274.known	chr19	+	722	3	FSM	ENSG00000169136.13	ENST00000596658.1	722	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACTACCAC	395	False	NA	NA	False	NA	NA	NA	49930218	49932632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49930433_49930731_49931029_49932421
transcript_73276.known	chr19	-	3361	3	FSM	ENSG00000213024.12	ENST00000352066.8	3361	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	21	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-17	True	NA	-1	True	AATAAA	-19	NA	49929504	49906824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49909885_49927693_49927816_49929325
transcript_73277.known	chr19	-	562	3	FSM	ENSG00000213024.12	ENST00000599560.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	58.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATTTGCTTTGGGAGCC	2835	False	NA	NA	False	NA	NA	NA	49929763	49909858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49909885_49927693_49927816_49929349
transcript_73278.known	chr19	-	2053	3	FSM	ENSG00000213024.12	ENST00000597029.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	29.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-22	True	NA	-2	True	NA	NA	NA	49929443	49908104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49909885_49927693_49927849_49929325
transcript_73283.known	chr19	+	180	2	FSM	ENSG00000169136.13	ENST00000600336.1	682	2	179	323	174	-323	multi-exon	FALSE	canonical	3	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGGATGGCTCGTAG	192	False	NA	NA	False	GGGGCT	-31	NA	49929395	49930906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49929401_49930731
transcript_73285.known	chr19	-	3479	2	FSM	ENSG00000213024.12	ENST00000422090.2	3479	2	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	2854	False	NA	-1	True	AATAAA	-19	NA	49929744	49906824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49909885_49929325
transcript_73286.nnic	chr19	-	3227	2	NIC	ENSG00000213024.12	novel	3479	2	NA	NA	-2	0	intron_retention	FALSE	canonical	3	64	junction_1	0	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	3082	False	49929530	-1	True	AATAAA	-19	NA	49929516	49906824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49909885_49929349
transcript_73295.known	chr19	-	1923	15	FSM	ENSG00000105053.11	ENST00000316763.8	1923	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	41.9129321039583	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	14	True	NA	-7	True	AATAAA	-14	NA	50025372	49976467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_73296.known	chr19	-	2126	15	FSM	ENSG00000105053.11	ENST00000599538.5	2126	15	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_14	23.9804342014442	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAATGAAGTAA	163	False	NA	NA	False	NA	NA	NA	50025946	49976759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_733.known	chr1	-	1832	10	FSM	ENSG00000131591.18	ENST00000421241.7	1832	10	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_9	13.7822573362984	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	6	True	NA	-16	True	TATAAA	-16	NA	1116089	1081822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_73300.known	chr19	-	1749	14	FSM	ENSG00000105053.11	ENST00000377011.6	1749	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	55.4068331504636	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAATAAATTGTTTTAC	14	True	NA	-31	True	NA	NA	NA	50025372	49976491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025266
transcript_73301.nic	chr19	-	1795	14	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_11	43.8134831048063	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-10	True	NA	-7	True	AATAAA	-14	NA	50025473	49976467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_73314.known	chr19	-	1831	13	FSM	ENSG00000105053.11	ENST00000594092.5	1831	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	59.7849734929736	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	782	False	NA	-14	True	AATAAA	-19	NA	50025327	49981699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_73315.nic	chr19	-	2022	13	NIC	ENSG00000105053.11	novel	1831	13	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	48.7119509634614	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-1	True	NA	-14	True	AATAAA	-19	NA	50025597	49981699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_73335.known	chr19	+	4715	5	FSM	ENSG00000142528.16	ENST00000391821.6	4715	5	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_1	19.421315609402	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCATTGGTTCCTTCTC	28	False	NA	7	True	ATTAAA	-12	NA	50025805	50048772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50026123_50031013_50031092_50039160_50039288_50041729_50041820_50044669
transcript_73336.known	chr19	+	4642	5	FSM	ENSG00000142528.16	ENST00000270617.8	4642	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	21.5058131676066	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTTCCTTCTCTCAG	-10	True	NA	11	True	ATTAAA	-16	NA	50026004	50048776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50026123_50030891_50031092_50039160_50039288_50041729_50041820_50044669
transcript_73338.known	chr19	+	2833	4	FSM	ENSG00000142528.16	ENST00000445728.7	2833	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	33.7078955472189	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAAAGTTTGTGCGCAT	-10	True	NA	3	True	AATAAA	-16	NA	50026004	50047167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50026123_50039160_50039288_50041729_50041820_50044669
transcript_73339.known	chr19	+	1525	3	FSM	ENSG00000204666.3	ENST00000527209.1	1525	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCATTTGTTTCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	50050588	50066793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50051195_50061799_50062000_50066074
transcript_73341.known	chr19	-	1979	12	FSM	ENSG00000105053.11	ENST00000593919.5	1979	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_11	26.3259919326826	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTGTGTGTGGGAAAC	14	True	NA	NA	False	NA	NA	NA	50025372	49987700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_73342.known	chr19	-	728	7	FSM	ENSG00000161652.13	ENST00000293405.8	814	7	86	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_3	2.06155281280883	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGTCCATTTC	-9	True	NA	0	True	AATAAA	-26	NA	50163195	50152547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50152652_50154599_50154727_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_73347.nic	chr19	+	2252	6	ISM	ENSG00000105357.20	ENST00000595016.1	4039	10	7822	-1	7822	0	3prime_fragment	FALSE	canonical	3	82	junction_2	11.2889326333361	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	NA	False	NA	19	True	AATAAA	-17	NA	50292585	50310540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_73354.known	chr19	+	2416	10	FSM	ENSG00000131408.15	ENST00000253727.10	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	34.8917196303855	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTAGGCACAATTCT	-27	True	NA	NA	False	AATAAA	-18	NA	50376456	50383388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_73355.known	chr19	+	1915	10	FSM	ENSG00000131408.15	ENST00000598168.5	1915	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	151.003392979622	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAGGAAAATAAAATAT	-26	True	NA	-25	True	AATAAA	-12	NA	50376457	50382978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379091_50379182_50379779_50379880_50381965_50382175_50382455
transcript_73356.known	chr19	+	1830	10	FSM	ENSG00000131408.15	ENST00000599105.5	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	144.895194136833	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTATTTAATAAAAAC	-11	True	NA	15	True	NA	NA	NA	50376472	50382950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379133_50379182_50379779_50379880_50381965_50382175_50382455
transcript_73360.known	chr19	+	1466	9	FSM	ENSG00000131408.15	ENST00000411902.6	1466	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	158.255677228338	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATAAGCCCCAGTCCAGG	-25	True	NA	NA	False	NA	NA	NA	50376458	50382731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_73363.nnic	chr19	-	722	2	Genic_Genomic	ENSG00000131398.15	novel	3347	4	NA	NA	-21	-18678	multi-exon	FALSE	canonical	2	2	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTGCCTGGCTGCTGTG	-4	True	NA	NA	False	NA	NA	NA	50333536	50332316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_50332691_50333188
transcript_73364.known	chr19	+	3514	27	FSM	ENSG00000062822.16	ENST00000595904.6	3514	27	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	164.727105331118	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	1	True	NA	24	True	AATAAA	-18	NA	50384346	50418014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408706_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_73365.known	chr19	+	3341	27	FSM	ENSG00000062822.16	ENST00000613923.6	3341	27	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	204.09366685929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACCAGGGAGAATTAATA	-12	True	NA	-15	True	NA	NA	NA	50384333	50417975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50384391_50398847_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409595_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_73366.known	chr19	+	3436	27	FSM	ENSG00000062822.16	ENST00000440232.7	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	91.4059237654119	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	1	True	NA	24	True	AATAAA	-18	NA	50384346	50418014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_73370.known	chr19	+	3792	6	FSM	ENSG00000269404.7	ENST00000595883.6	3792	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	10.762899237659	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGCGTATGCCTGTA	-1	True	NA	NA	False	AATAAA	-13	NA	50418937	50431314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_73372.known	chr19	+	564	6	FSM	ENSG00000269404.7	ENST00000597855.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	20.4587389640711	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCCGGCGTCTTCCAG	2	True	NA	NA	False	GGGGCT	-45	NA	50418940	50428124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423639_50423756_50428037
transcript_73374.known	chr19	+	847	5	FSM	ENSG00000269404.7	ENST00000596074.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	18.4577219612822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGGACCTATGGA	2	True	NA	NA	False	NA	NA	NA	50418940	50428587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50423604_50423756_50428037
transcript_73377.nic	chr19	+	1579	5	ISM	ENSG00000269404.7	ENST00000595883.6	3792	6	850	2323	830	2	3prime_fragment	FALSE	canonical	3	44	junction_2	6.92820323027551	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTTGTCATGTCTGA	849	False	NA	23	True	NA	NA	NA	50419787	50428991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_73379.known	chr19	+	521	4	FSM	ENSG00000269404.7	ENST00000594188.1	521	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	13.8884444373331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	50418940	50423197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822
transcript_73380.nic	chr19	+	1364	4	ISM	ENSG00000269404.7	ENST00000596074.5	847	5	847	-404	830	2	3prime_fragment	FALSE	canonical	2	11	junction_2	20.4015249974658	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTTGTCATGTCTGA	849	False	NA	23	True	NA	NA	NA	50419787	50428991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_50419974_50422472_50422546_50423604_50423756_50428037
transcript_73381.known	chr19	+	578	3	FSM	ENSG00000269404.7	ENST00000599923.5	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	17	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGAGGCCCCGGGG	0	True	NA	NA	False	NA	NA	NA	50418938	50422975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472
transcript_73383.nic	chr19	+	933	2	ISM	ENSG00000269404.7	ENST00000594188.1	521	4	847	-22	830	22	intron_retention	FALSE	canonical	3	60	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAGAAAAGAAAAC	849	False	NA	NA	False	NA	NA	NA	50419787	50423219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_50419974_50422472
transcript_73384.known	chr19	+	1443	6	FSM	ENSG00000269404.7	ENST00000270632.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.4587389640711	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCATGTCT	19	False	NA	21	True	NA	NA	NA	50418957	50428989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423752_50428037
transcript_73385.known	chr19	+	3524	28	FSM	ENSG00000062822.16	ENST00000601098.6	3524	28	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	204.699297676215	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGACCAGGGAGAATT	-4	True	NA	-19	True	NA	NA	NA	50384341	50417971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50384391_50395024_50395151_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_73388.known	chr19	+	3604	28	FSM	ENSG00000086967.10	ENST00000357701.6	3604	28	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	2.77011288167632	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGAGTGTCTGTCCTTC	-4	True	NA	13	True	AAAACA	-13	NA	50432891	50466321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50432973_50435160_50435251_50435775_50435863_50436011_50436161_50436616_50436735_50437472_50437522_50437658_50437719_50440879_50441077_50442180_50442314_50443493_50443619_50443710_50443817_50445879_50446053_50448224_50448391_50450828_50450936_50451279_50451310_50451863_50452004_50454019_50454180_50454264_50454370_50455107_50455297_50455509_50455645_50458586_50458755_50458917_50459007_50459110_50459307_50460039_50460180_50461541_50461702_50461899_50462037_50464345_50464533_50466194
transcript_73390.known	chr19	+	2014	8	FSM	ENSG00000161671.17	ENST00000376918.7	2014	8	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_6	35.0731015021425	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	-22	True	NA	-32	True	ATTAAA	-23	NA	50476498	50483351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
transcript_73391.known	chr19	+	9439	7	FSM	ENSG00000161671.17	ENST00000334976.11	9439	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	11.5998084275369	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGATACACTGATATT	-14	True	NA	6	True	AATAAA	-16	NA	50476506	50490871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148
transcript_73397.known	chr19	-	443	3	FSM	ENSG00000142530.11	ENST00000593796.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	30.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGGCCACGAGCGGTTTCG	1362	False	NA	NA	False	AATAAA	-25	NA	50475485	50466784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50466956_50467621_50467733_50475324
transcript_73398.known	chr19	-	653	5	FSM	ENSG00000142530.11	ENST00000602178.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	23.6154081057262	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	576	False	50476284	NA	False	AATAAA	-22	NA	50476271	50466787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50466956_50467621_50467733_50475324_50475456_50475832_50475934_50476129
transcript_73399.known	chr19	-	582	5	FSM	ENSG00000161677.12	ENST00000594350.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	15.1739909054935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGGCCCAGGGCCTGTG	-5	True	NA	NA	False	NA	NA	NA	50511159	50506256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511074
transcript_73400.known	chr19	-	802	5	FSM	ENSG00000161677.12	ENST00000601423.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	12.7867118525444	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	-8	True	NA	-6	True	AATAAA	-18	NA	50511162	50505997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511116
transcript_73402.known	chr19	-	733	4	FSM	ENSG00000161677.12	ENST00000595669.5	733	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	14.3372087784044	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGTGTCT	4	True	NA	-10	True	AATAAA	-14	NA	50511220	50506001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50506273_50506377_50506573_50510285_50510449_50511116
transcript_73410.known	chr19	-	971	5	FSM	ENSG00000167747.16	ENST00000597493.6	1570	5	0	599	0	17	multi-exon	FALSE	canonical	3	12	junction_4	1027.86730053057	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTGGATAAGTGGGC	338	False	NA	NA	False	NA	NA	NA	50804620	50798302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50802453_50802615_50804571
transcript_73417.known	chr19	-	1718	4	FSM	ENSG00000167747.16	ENST00000641834.2	1735	4	0	17	0	0	multi-exon	FALSE	canonical	3	1159	junction_3	436.843984354445	4290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-2	True	NA	-25	True	CATAAA	-19	NA	50804929	50797703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50804571
transcript_73418.known	chr19	-	1639	2	FSM	ENSG00000167747.16	ENST00000596655.1	1639	2	0	0	0	0	multi-exon	FALSE	canonical	3	2145	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGCCAAGCAGGGCAAC	2700	False	NA	-82	True	NA	NA	NA	50802258	50797760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50799358_50802216
transcript_73419.known	chr19	-	292	2	FSM	ENSG00000167747.16	ENST00000602125.1	292	2	0	0	0	0	multi-exon	FALSE	canonical	3	1159	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCAACATGGTGAAACC	0	True	NA	NA	False	NA	NA	NA	50804594	50801988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50802258_50804571
transcript_73422.known	chr19	-	876	5	FSM	ENSG00000167748.11	ENST00000301420.3	876	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCACGTTCTGCCAT	2	True	NA	0	True	AGTAAA	-18	NA	50823787	50819145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50819350_50819898_50820036_50820153_50820444_50821711_50821872_50823702
transcript_73423.nnic	chr19	-	1195	3	NNC	ENSG00000167748.11	novel	876	5	NA	NA	-262	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	6.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCACGTTCTGCCAT	5966	False	NA	0	True	AGTAAA	-18	NA	50821111	50819145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_50819246_50819898_50820036_50820153
transcript_73424.known	chr19	-	912	3	FSM	ENSG00000167748.11	ENST00000596300.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATAAGCCTTCTGTCGCC	-11	True	NA	NA	False	GGGGCT	-19	NA	50820849	50819270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50819350_50819898_50820036_50820153
transcript_73425.known	chr19	-	1347	5	ISM	ENSG00000167749.12	ENST00000324041.6	1416	6	657	1	0	-1	3prime_fragment	FALSE	canonical	0	0	junction_1	1.29903810567666	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTGTTTGTAGTGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	50910738	50906351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_50907087_50908358_50908496_50908578_50908830_50909251_50909415_50910677
transcript_73426.known	chr19	-	481	3	FSM	ENSG00000167749.12	ENST00000431178.2	481	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGACTGGGAACCCA	1351	False	NA	NA	False	NA	NA	NA	50909328	50906933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50907087_50908578_50908830_50909251
transcript_73427.known	chr19	-	701	3	FSM	ENSG00000167749.12	ENST00000599865.5	701	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGACTGGGAACCCA	1351	False	NA	NA	False	NA	NA	NA	50909328	50906933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50907087_50908358_50908830_50909251
transcript_73428.known	chr19	-	1429	7	FSM	ENSG00000167755.15	ENST00000310157.7	1429	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.13437474581095	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	-10	True	NA	0	True	AATAAA	-19	NA	50969591	50958630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540_50968592_50969489
transcript_73429.known	chr19	-	1513	6	FSM	ENSG00000167754.13	ENST00000336334.8	1513	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	1.35646599662505	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-5	True	NA	-4	True	AATAAA	-14	NA	50953038	50943302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952746
transcript_7343.known	chr1	+	4075	15	FSM	ENSG00000143033.18	ENST00000370298.9	4075	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	161.764126595056	1891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	-2	True	NA	35	True	ATTAAA	-36	NA	93079282	93139076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_73430.known	chr19	-	1365	6	FSM	ENSG00000167754.13	ENST00000593428.5	1365	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.89736659610103	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	6059	False	NA	-4	True	AATAAA	-14	NA	50953093	50943302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952949
transcript_73432.known	chr19	-	1708	6	FSM	ENSG00000167755.15	ENST00000376851.7	1708	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	1.93907194296653	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	0	True	NA	0	True	AATAAA	-19	NA	50968972	50958630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540
transcript_73433.known	chr19	-	1955	6	FSM	ENSG00000169035.12	ENST00000595820.6	1955	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.87054001888146	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGAGAGAGGTGACCTT	-5	True	NA	NA	False	AATAAA	-28	NA	50983917	50976467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50977692_50979787_50979925_50980239_50980488_50981766_50981915_50982326_50982458_50983850
transcript_73434.known	chr19	-	928	5	FSM	ENSG00000167755.15	ENST00000599690.1	928	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.58113883008419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACATCTACCTCCCG	-1	True	NA	NA	False	NA	NA	NA	50968767	50959157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968540
transcript_73435.known	chr19	-	819	5	FSM	ENSG00000167755.15	ENST00000599881.5	819	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.27760839478607	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACATCTACCTCCCG	-1	True	NA	NA	False	NA	NA	NA	50968767	50959157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50968064_50968113_50968540
transcript_73436.known	chr19	-	1054	5	FSM	ENSG00000169035.12	ENST00000597707.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACACAAAACCCTCAGT	20	True	NA	NA	False	GATAAA	-40	NA	50984038	50977358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50977692_50979787_50979925_50980239_50980488_50981766_50981915_50983850
transcript_7344.known	chr1	+	4046	16	FSM	ENSG00000143033.18	ENST00000545708.5	4046	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.102321753693	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	-8	True	NA	38	True	ATTAAA	-39	NA	93079234	93139079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_73441.nic	chr19	-	948	5	ISM	ENSG00000129455.15	ENST00000600767.5	1324	7	1430	0	-114	0	3prime_fragment	FALSE	canonical	0	0	junction_4	2.34520787991171	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	8340	False	NA	-1	True	AATAAA	-19	NA	51001281	50996007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_50996215_50997750_50997885_50999995_51000259_51000423_51000584_51001097
transcript_73444.known	chr19	-	853	5	FSM	ENSG00000129455.15	ENST00000291726.11	853	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.27760839478607	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	7919	False	NA	-1	True	AATAAA	-19	NA	51001702	50996007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51001097_51001176_51001531
transcript_73445.known	chr19	-	555	4	FSM	ENSG00000129455.15	ENST00000347619.8	555	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCCTGTCTCTGTTTTG	7953	False	NA	-2	True	AATAAA	-18	NA	51001668	50996008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_50997750_50997885_51001097_51001176_51001531
transcript_73448.known	chr19	-	456	3	FSM	ENSG00000129455.15	ENST00000320838.9	456	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	7919	False	NA	-1	True	AATAAA	-19	NA	51001702	50996007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_51001097_51001176_51001531
transcript_73449.known	chr19	-	267	2	FSM	ENSG00000129455.15	ENST00000593490.1	267	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTCCTTGCCTGTC	8	True	NA	-11	True	AATAAA	-9	NA	51001167	50996017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_51001097
transcript_7345.known	chr1	+	1951	14	FSM	ENSG00000143033.18	ENST00000370303.4	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	200.591049727472	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	26	False	NA	50	True	AAAAAG	-19	NA	93079310	93137151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_73451.known	chr19	-	2984	6	FSM	ENSG00000129451.12	ENST00000358789.8	2984	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	10.9068785635488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTACTTGATAATG	-2	True	NA	NA	False	NA	NA	NA	51019709	51012738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51019042_51019140_51019626
transcript_73456.known	chr19	-	1428	5	FSM	ENSG00000129451.12	ENST00000601467.1	1428	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.0468141232739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTCACCCAACCTGACTT	0	True	NA	NA	False	NA	NA	NA	51018849	51014509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51018454
transcript_73457.nic	chr19	-	1582	4	ISM	ENSG00000129451.12	ENST00000601467.1	1428	5	1255	-245	-272	245	3prime_fragment	FALSE	canonical	3	41	junction_1	0.471404520791032	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTCCCGGTGAAAGCGT	9989	False	NA	0	True	ACTAAA	-24	NA	51017594	51014264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109
transcript_73458.nic	chr19	-	1508	4	ISM	ENSG00000129451.12	ENST00000601467.1	1428	5	1255	-171	-272	171	3prime_fragment	FALSE	canonical	3	41	junction_1	0.471404520791032	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTGTCATGTAAGGC	9989	False	NA	0	True	NA	NA	NA	51017594	51014338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109
transcript_7346.known	chr1	+	1937	14	FSM	ENSG00000143033.18	ENST00000471953.5	1937	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	216.225474034171	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCTGGCTTTTACT	25	False	NA	-12	True	NA	NA	NA	93079309	93137089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_73460.nic	chr19	-	1227	6	NIC	ENSG00000167757.14	novel	1176	6	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.01980390271856	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTGAGTGCTTACTATG	8347	False	NA	2	True	AATAAA	-20	NA	51026658	51022230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_51022698_51023091_51023229_51024044_51024311_51024633_51024795_51025591_51025667_51026537
transcript_73461.known	chr19	-	1268	6	FSM	ENSG00000167757.14	ENST00000319756.7	1268	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.01980390271856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCTACTGAGTGCTTA	7382	False	NA	-3	True	AATAAA	-15	NA	51027623	51022235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51022698_51023091_51023229_51024044_51024311_51024633_51024795_51025591_51025667_51027456
transcript_73462.known	chr19	-	1176	6	FSM	ENSG00000167757.14	ENST00000453757.8	1176	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.894427190999916	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCTACTGAGTGCTTA	-3	True	NA	-3	True	AATAAA	-15	NA	51026616	51022235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51022698_51023091_51023229_51024044_51024311_51024637_51024795_51025591_51025667_51026537
transcript_73463.known	chr19	-	1347	6	FSM	ENSG00000167757.14	ENST00000594768.5	1347	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.894427190999916	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACTGAGTGCTTACTA	7302	False	NA	0	True	AATAAA	-18	NA	51027703	51022232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51022698_51023091_51023229_51024044_51024311_51024637_51024795_51025591_51025667_51027456
transcript_73466.known	chr19	-	1077	5	FSM	ENSG00000186474.16	ENST00000525263.5	1077	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTCCATTTGAAGT	264	False	NA	NA	False	AATAAA	-19	NA	51034741	51029091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51029458_51030787_51030922_51031875_51032136_51033979_51034140_51034584
transcript_73467.known	chr19	-	735	5	FSM	ENSG00000186474.16	ENST00000529888.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.82915619758885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCAATAGTCTGGAATAAA	143	False	NA	NA	False	NA	NA	NA	51034862	51029129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51029458_51030787_51030922_51033979_51034140_51034584_51034641_51034805
transcript_7347.known	chr1	+	1870	14	FSM	ENSG00000143033.18	ENST00000467953.5	1870	14	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	119.219552822295	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCAAAAAAATTCAAAAAAG	8646	False	NA	31	True	NA	NA	NA	93110245	93137132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_73470.nnic	chr19	-	1961	6	NNC	ENSG00000167759.13	novel	1820	5	NA	NA	-650	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	7.33757453113766	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGCATGGTTCCC	26	False	NA	-2	True	AATAAA	-20	NA	51065764	51055625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015_51065107_51065637
transcript_73472.nnic	chr19	-	1066	6	NNC	ENSG00000167759.13	novel	1820	5	NA	NA	-716	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	7.33757453113766	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAGAAATGTACCGGC	NA	False	NA	-23	True	NA	NA	NA	51065830	51056586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015_51065107_51065637
transcript_73474.nnic	chr19	-	2016	5	NNC	ENSG00000167759.13	novel	1820	5	NA	NA	-716	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	12.6169528809455	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGCATGGTTCCC	NA	False	NA	-2	True	AATAAA	-20	NA	51065830	51055625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_51056776_51058537_51058675_51059744_51060094_51060432_51060620_51065637
transcript_7348.known	chr1	+	1038	2	FSM	ENSG00000143033.18	ENST00000468457.1	1038	2	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATCAGCGAAACTCTGT	7975	False	NA	NA	False	NA	NA	NA	93118344	93120274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93118441_93119332
transcript_73480.known	chr19	-	1820	5	FSM	ENSG00000167759.13	ENST00000595793.6	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.64736790015417	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGCATGGTTCCC	1	True	NA	-2	True	AATAAA	-20	NA	51065092	51055625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015
transcript_73481.known	chr19	-	615	5	FSM	ENSG00000167759.13	ENST00000595547.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.9034879005639	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAGAAATGTACCGGC	723	False	NA	-23	True	NA	NA	NA	51065067	51056586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51056776_51058537_51058675_51060043_51060094_51060432_51060620_51065015
transcript_73490.known	chr19	-	417	3	FSM	ENSG00000160318.6	ENST00000593841.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGCGGCTCCGCGTGCT	4970	False	NA	-6	True	AATAAA	-17	NA	51367977	51367099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51367398_51367549_51367577_51367885
transcript_73494.known	chr19	-	872	6	FSM	ENSG00000105379.10	ENST00000309244.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	34.3685903115039	7310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTAACTTATTTCCT	-21	True	NA	-14	True	AATAAA	-19	NA	51366388	51345168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
transcript_73495.known	chr19	-	983	5	FSM	ENSG00000105370.8	ENST00000221973.7	983	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGTGTTAATACTTGAG	2649	False	NA	NA	False	AATAAA	-16	NA	51387955	51379908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51380263_51380504_51380640_51382417_51382568_51387142_51387450_51387918
transcript_73496.known	chr19	-	1335	2	FSM	ENSG00000262874.2	ENST00000574814.2	1335	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCGTGTGTGCGCGCGC	-6	True	NA	0	True	AATAAA	-19	NA	51390591	51388288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51389510_51390477
transcript_73497.nnic	chr19	+	477	3	FSM	ENSG00000268889.2	ENST00000687249.1	435	3	-43	1	-29	-1	multi-exon	FALSE	canonical	3	4	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGGTTGTTCTTGTTTTT	7025	False	NA	NA	False	NA	NA	NA	51394458	51403400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51394596_51402277_51402417_51403199
transcript_73498.known	chr19	+	559	2	FSM	ENSG00000268889.2	ENST00000600765.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCAGGATCAGTGGCA	7054	False	NA	NA	False	NA	NA	NA	51394487	51403650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51394596_51403199
transcript_735.known	chr1	-	982	10	FSM	ENSG00000131591.18	ENST00000482816.5	982	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	22.5394030834453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCAGCCCGGTTAGGACC	5048	False	NA	NA	False	NA	NA	NA	1116243	1083925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_73503.known	chr19	+	6552	5	FSM	ENSG00000105497.8	ENST00000262259.7	6552	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	2.27760839478607	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTTATCAAGTGTGAAG	-9	True	NA	9	True	AATAAA	-20	NA	51571282	51592510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51571476_51573149_51573402_51581390_51581518_51581786_51581883_51586626
transcript_73506.known	chr19	+	1239	2	FSM	ENSG00000105497.8	ENST00000545217.5	1239	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTGTGAGATTATATAT	6	True	NA	NA	False	AATAAA	-26	NA	51571297	51574210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51571476_51573149
transcript_73508.known	chr19	+	664	2	FSM	ENSG00000269388.1	ENST00000598755.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACCTGGCCTTCCATGTG	-26	True	NA	4	True	AATAAA	-9	NA	51594560	51601788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51594647_51601210
transcript_73509.known	chr19	+	1960	8	FSM	ENSG00000182310.15	ENST00000573266.5	1960	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.06529315364471	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	15	False	NA	12	True	AATAAA	-19	NA	51693343	51705190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51694556_51701657_51701727_51702628_51702653_51703020_51703099_51703227_51703336_51704029_51704187_51704269_51704481_51705089
transcript_73511.known	chr19	+	759	6	FSM	ENSG00000182310.15	ENST00000572160.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	8.16333265278342	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAACTCTAGATTG	9207	False	NA	-3	True	AATAAA	-4	NA	51702535	51705175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51702653_51703020_51703099_51703227_51703338_51704029_51704187_51704269_51704481_51705089
transcript_73512.nic	chr19	+	762	5	ISM	ENSG00000182310.15	ENST00000573266.5	1960	8	9570	0	-40	0	3prime_fragment	FALSE	canonical	3	12	junction_2	6.10327780786685	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	9585	False	NA	12	True	AATAAA	-19	NA	51702913	51705190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_51703099_51703227_51703336_51704029_51704187_51704269_51704481_51705089
transcript_73513.nic	chr19	+	764	5	ISM	ENSG00000182310.15	ENST00000572160.5	759	6	378	-15	-40	0	3prime_fragment	FALSE	canonical	3	4	junction_2	8.90224690738243	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	9585	False	NA	12	True	AATAAA	-19	NA	51702913	51705190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_51703099_51703227_51703338_51704029_51704187_51704269_51704481_51705089
transcript_73515.known	chr19	+	660	4	FSM	ENSG00000182310.15	ENST00000573151.5	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.03957069398096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	9816	False	NA	12	True	AATAAA	-19	NA	51703144	51705190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51703336_51704029_51704187_51704269_51704481_51705089
transcript_73516.known	chr19	+	500	3	FSM	ENSG00000182310.15	ENST00000576975.1	500	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	5.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	NA	False	NA	12	True	AATAAA	-19	NA	51703998	51705190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51704187_51704269_51704481_51705089
transcript_73517.known	chr19	+	554	3	FSM	ENSG00000182310.15	ENST00000573896.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGCTATTAACCGAAAT	4	True	NA	NA	False	GATAAA	-33	NA	51704320	51712387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51704481_51705089_51705129_51712032
transcript_73518.known	chr19	+	342	2	FSM	ENSG00000182310.15	ENST00000572609.1	342	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTTTCATCTCCGAAG	18	True	NA	11	True	AATAAA	-18	NA	51704334	51705189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51704577_51705089
transcript_7352.known	chr1	+	4552	28	FSM	ENSG00000122483.18	ENST00000401026.7	4552	28	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18.7919808948754	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGCCCTTCTAAAAC	427	False	NA	NA	False	AATAAA	-21	NA	93180362	93278607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93180883_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
transcript_73523.nic	chr19	-	962	8	NIC	ENSG00000161551.15	novel	1865	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	24.5556427697736	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	15	True	NA	-9	True	AAAAAG	-41	NA	51887967	51855809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887831
transcript_73524.nic	chr19	-	970	8	NIC	ENSG00000161551.15	novel	1865	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_7	23.7469654344916	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	-5	True	NA	-9	True	AAAAAG	-41	NA	51887987	51855809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887843
transcript_73528.nic	chr19	-	2437	7	NIC	ENSG00000161551.15	novel	7308	7	NA	NA	7	-4951	combination_of_known_junctions	FALSE	canonical	3	7	junction_6	29.4415617037472	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTAGTTTTTTATGAG	15	True	NA	-15	True	AGTAAA	-2	NA	51887967	51871998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887831
transcript_73532.known	chr19	-	3192	5	FSM	ENSG00000198093.11	ENST00000354957.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	24.4987244565916	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATCTCTATTTCCTGTG	-3	True	NA	-12	True	AATAAA	-15	NA	51905017	51889234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_73542.known	chr19	-	1865	7	FSM	ENSG00000161551.15	ENST00000640955.1	1865	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	16.6299595776886	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	-22	True	NA	-9	True	AAAAAG	-41	NA	51887951	51855809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_73546.nic	chr19	+	2441	7	NIC	ENSG00000176024.18	novel	2225	6	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	41.6879945414611	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	NA	False	NA	5	True	AATAAA	-15	NA	51927426	51945752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_51927541_51927894_51927995_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_73549.nic	chr19	+	2260	6	NIC	ENSG00000176024.18	novel	3165	6	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	35.8719946476356	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	NA	False	NA	5	True	AATAAA	-15	NA	51927435	51945752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_51927541_51929731_51929825_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_73551.known	chr19	+	3165	6	FSM	ENSG00000176024.18	ENST00000293471.11	3165	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	20.1851430512642	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGCCATGCTCTTAA	1	True	NA	NA	False	TATAAA	-41	NA	51927471	51946621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51927541_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_73552.nnic	chr19	+	2350	6	NNC	ENSG00000176024.18	novel	3165	6	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	41.2863173460651	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	NA	False	NA	5	True	AATAAA	-15	NA	51927396	51945752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_51927520_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_73554.known	chr19	+	606	5	FSM	ENSG00000176024.18	ENST00000599683.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.6653333119993	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGGCAAAATCATGATAC	-23	True	NA	NA	False	NA	NA	NA	51927447	51944246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51927541_51929731_51929897_51940208_51940336_51940616_51940710_51944118
transcript_73558.known	chr19	+	542	5	FSM	ENSG00000176024.18	ENST00000600853.1	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	44.7045858945142	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTCTGAAGAGAGTGGA	3	True	NA	NA	False	AAGAAA	-37	NA	51927473	51944165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51927541_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_73565.known	chr19	-	1601	2	FSM	ENSG00000256683.7	ENST00000597555.1	1601	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	20	True	NA	NA	False	NA	NA	NA	51986805	51972966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51974532_51986769
transcript_73566.known	chr19	+	701	3	FSM	ENSG00000269235.3	ENST00000595010.3	738	3	37	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTCTCCTGTCTTT	15	True	NA	NA	False	AATATA	-1	NA	51949158	51981367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51949236_51976390_51976574_51980926
transcript_73567.known	chr19	-	579	5	FSM	ENSG00000256683.7	ENST00000600703.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.6221445044903	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGGCACACGGTGATCA	-1	True	NA	NA	False	NA	NA	NA	51986826	51967287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51967401_51968577_51968674_51969004_51969132_51974345_51974532_51986769
transcript_73568.known	chr19	-	165	2	FSM	ENSG00000256683.7	ENST00000599258.1	165	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTATTTTGTTTGT	-2	True	NA	NA	False	GATAAA	-22	NA	51986827	51981924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51982032_51986769
transcript_73571.known	chr19	-	4075	7	FSM	ENSG00000197619.15	ENST00000598071.6	4075	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	8.14452781524708	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGTGTGAGCACAATT	-1	True	NA	-3	True	AATAAA	-26	NA	52008211	51991331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52007292_52007331_52008140
transcript_73573.known	chr19	-	561	6	FSM	ENSG00000197619.15	ENST00000601178.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.5440023626696	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCACTTGCAAAATCAAAGT	-13	True	NA	NA	False	NA	NA	NA	52008223	51994807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51994838_52000357_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_73578.known	chr19	-	704	5	FSM	ENSG00000197619.15	ENST00000597747.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	6.57647321898295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGAGTTATTTCACT	47	False	NA	NA	False	AATACA	-16	NA	52008163	52000124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_73580.nnic	chr19	-	1379	6	NNC	ENSG00000142556.19	novel	1293	6	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	64.2383063288565	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTCTCTTTTATTC	-25	True	NA	-16	True	AATATA	-1	NA	52028414	52012764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52013253_52017095_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_73581.known	chr19	-	1293	6	FSM	ENSG00000142556.19	ENST00000356322.10	1293	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	64.6250725338084	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTCTCTTTTATTC	40	True	NA	-16	True	AATATA	-1	NA	52028349	52012764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52013253_52017116_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_73582.known	chr19	-	1031	6	FSM	ENSG00000142556.19	ENST00000595189.5	1031	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75.2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGAGAAACCCCATGC	0	True	NA	NA	False	ACTAAA	-31	NA	52028337	52017000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52017360_52017575_52017698_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_73586.known	chr19	-	4628	5	FSM	ENSG00000142556.19	ENST00000270649.11	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	18.3762754659371	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGCTTTTGCTTTTGC	10	True	NA	-5	True	AATAAA	-17	NA	52028379	52013323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_73590.nic	chr19	-	1015	2	ISM	ENSG00000142556.19	ENST00000595189.5	1031	6	-277	8319	-235	-6927	5prime_fragment	FALSE	canonical	3	160	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGACTCAATATGAAAGAAT	NA	False	NA	NA	False	AAAAAG	-14	NA	52028614	52025319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52025962_52028241
transcript_73591.known	chr19	-	3877	7	FSM	ENSG00000197608.12	ENST00000594440.6	3877	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	4.7404875511093	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCCTCAGGTATTTCTG	-26	True	NA	0	True	ATTAAA	-16	NA	52095765	52064464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52067611_52076043_52076173_52076957_52077085_52084786_52084879_52088936_52089003_52093845_52093972_52095574
transcript_73598.nnic	chr19	-	904	3	Fusion	ENSG00000260160.1_ENSG00000197608.12	novel	675	2	NA	NA	-11	0	multi-exon	TRUE	non_canonical	0	0	junction_1	7.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGATTGATTACTGAC	NA	False	NA	-5	True	ATTAAA	-14	NA	52095776	52058489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_52059108_52093887_52093972_52095574
transcript_73602.known	chr19	+	748	1	FSM	ENSG00000275055.1	ENST00000614138.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTTTTTGCCATGTAA	78	False	NA	NA	False	AATAAA	-16	NA	52049006	52049754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52049000_52049800
transcript_73603.known	chr19	-	2563	5	FSM	ENSG00000204611.7	ENST00000330123.9	2563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.9776696670756	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTCCTACTTACTGATA	185	False	NA	NA	False	NA	NA	NA	52139746	52114789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52117025_52122359_52122458_52123922_52124050_52130500_52130589_52139731
transcript_73607.known	chr19	-	4356	4	FSM	ENSG00000204611.7	ENST00000600228.6	4356	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	4.10960933531265	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTTTCTGTTTTTTT	-7	True	NA	-21	True	ATTAAA	-1	NA	52139938	52113090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52117025_52123922_52124050_52130500_52130589_52139731
transcript_73616.known	chr19	+	578	2	FSM	ENSG00000267927.1	ENST00000599775.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCGTTCACCCTCCTT	NA	False	NA	NA	False	AATATA	-22	NA	52171157	52177002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52171204_52176470
transcript_73618.nic	chr19	-	489	2	ISM	ENSG00000204611.7	ENST00000600282.1	556	3	-76	6594	-76	-6594	5prime_fragment	FALSE	canonical	3	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGGAAAAGGAGT	1030	False	NA	-10	True	AAGAAA	-14	NA	52138901	52130537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52130589_52138463
transcript_73619.known	chr19	+	294	1	FSM	ENSG00000243680.1	ENST00000492641.1	294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	751	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCTATGATTAGTCAT	26	False	NA	-54	True	NA	NA	NA	52143042	52143336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52143000_52143300
transcript_73620.known	chr19	-	556	3	FSM	ENSG00000204611.7	ENST00000600282.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	29.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGAACCTGGTCTTCCTA	1106	False	NA	NA	False	NA	NA	NA	52138825	52123943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52124050_52130500_52130589_52138463
transcript_73621.known	chr19	-	808	4	FSM	ENSG00000196267.14	ENST00000597065.1	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.18544972870135	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTTTCATTTCCCAT	18	False	NA	1	True	AATAAA	-19	NA	52171643	52160320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171335
transcript_73622.known	chr19	-	384	3	FSM	ENSG00000196267.14	ENST00000602187.1	384	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCTGGCTCACAGAGTG	1927	False	NA	0	True	AATAAA	-28	NA	52169734	52165183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52165386_52168057_52168153_52169647
transcript_73624.known	chr19	+	979	3	FSM	ENSG00000105568.18	ENST00000391791.4	979	3	0	0	0	0	multi-exon	FALSE	canonical	3	2648	junction_1	50	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGTCTAGAAGTAGTT	7493	False	NA	4	True	NA	NA	NA	52220982	52226401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52221134_52222098_52222242_52225716
transcript_73629.known	chr19	+	2150	6	FSM	ENSG00000167554.15	ENST00000321287.12	2150	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	7.90948797331408	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTCTTTTTTTTTTG	-2	True	NA	8	True	AATAAA	-18	NA	52336244	52367122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52336507_52347706_52347832_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_73631.known	chr19	+	2921	6	FSM	ENSG00000167554.15	ENST00000403906.8	2921	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.1773780845922	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCTACATGCCTCT	-4	True	NA	NA	False	NA	NA	NA	52336242	52367778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52336507_52347706_52347945_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_73639.known	chr19	+	2723	5	FSM	ENSG00000167554.15	ENST00000601151.5	2723	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	11.0989864402116	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCTACATGCCTCT	21	True	NA	NA	False	NA	NA	NA	52336311	52367778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52336507_52347706_52347945_52349153_52349236_52353681_52353809_52365697
transcript_73640.known	chr19	+	6282	4	FSM	ENSG00000196214.11	ENST00000439461.6	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	33.1762967593833	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTCTTTGATTTCT	-7	True	NA	8	True	AATAAA	-22	NA	52269586	52296046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52269632_52282110_52282238_52283284_52283414_52290065
transcript_73647.known	chr19	+	588	4	FSM	ENSG00000196214.11	ENST00000601711.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	151.085700477871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAAGCAAAGGACAGAGC	-1	True	NA	NA	False	TATAAA	-38	NA	52269592	52283318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52269632_52277153_52277542_52282110_52282238_52283284
transcript_73651.known	chr19	+	554	3	FSM	ENSG00000196214.11	ENST00000593703.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	164	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGTAAAACCGTCAG	-7	True	NA	NA	False	GATAAA	-16	NA	52269586	52290445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52269632_52283284_52283414_52290065
transcript_73652.known	chr19	+	4746	5	FSM	ENSG00000198464.14	ENST00000595962.6	4746	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	11.5	1255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACACCTTGTAAAACAT	-11	True	NA	8	True	AATAAA	-18	NA	52297168	52325922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52297224_52300393_52300485_52314152_52314280_52315833_52315963_52321578
transcript_73653.known	chr19	+	496	4	FSM	ENSG00000221923.9	ENST00000344085.9	496	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.5944690142922	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGATTGAAGTTTGTTT	4	True	NA	4	True	AATAAA	-17	NA	52369938	52374717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374395_52374483
transcript_73654.known	chr19	+	2258	4	FSM	ENSG00000221923.9	ENST00000422689.3	2258	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	35.3679076125361	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACTTTACATTTTATGA	-12	True	NA	18	True	ATTAAA	-30	NA	52369922	52385795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52383848
transcript_73655.known	chr19	+	953	4	FSM	ENSG00000221923.9	ENST00000600321.5	953	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	13.5728487143349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGAGACAGGTTTT	1	True	NA	NA	False	NA	NA	NA	52369935	52380075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420
transcript_73656.known	chr19	+	814	4	FSM	ENSG00000258405.11	ENST00000601120.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.05480466765633	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAAAACAATATAAAT	14	True	NA	NA	False	NA	NA	NA	52492829	52511142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52492864_52501826_52501909_52504654_52504782_52510571
transcript_73661.known	chr19	+	3585	5	FSM	ENSG00000198482.14	ENST00000359798.9	3585	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2.06155281280883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGAGATGGAGTGTC	-9	True	NA	NA	False	NA	NA	NA	52527667	52556336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52527712_52532907_52533010_52543265_52543348_52547511_52547639_52553106
transcript_73665.known	chr19	+	601	4	FSM	ENSG00000198482.14	ENST00000461321.1	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	7.25718035235908	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATTGCTAATCAACTT	-3	True	NA	NA	False	NA	NA	NA	52535984	52553436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52536047_52543265_52543348_52547511_52547639_52553106
transcript_73666.known	chr19	+	5230	4	FSM	ENSG00000167562.14	ENST00000391785.8	5230	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	15.2825245151302	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTAATTTATAATGTA	-2	True	NA	13	True	AATAAA	-16	NA	52570286	52587174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52570331_52574076_52574163_52575894_52576022_52582201
transcript_73673.nic	chr19	+	237	2	ISM	ENSG00000198482.14	ENST00000486474.5	553	4	-18	20349	-2	-20084	5prime_fragment	FALSE	canonical	3	19	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAGATTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-32	NA	52527649	52533082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_52527712_52532907
transcript_73674.known	chr19	+	4233	4	FSM	ENSG00000198482.14	ENST00000487863.5	4233	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	3.55902608401044	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGCTTTGTTTTGTTT	NA	False	NA	34	True	AATAGA	-14	NA	52527651	52564464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52527712_52543265_52543348_52553106_52556051_52563317
transcript_73677.known	chr19	-	2890	6	FSM	ENSG00000167766.20	ENST00000594682.6	2890	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	26.431799030713	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATCTGGAAAGGTTAC	8	True	NA	-21	True	AATAAA	-15	NA	52690488	52612377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
transcript_73684.nic	chr19	-	683	5	ISM	ENSG00000167766.20	ENST00000596440.5	561	6	-71	119	-55	-82	5prime_fragment	FALSE	canonical	3	18	junction_2	28.5569606225873	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTTCACTGTCCCC	-7	True	NA	-5	True	AATGAA	-19	NA	52690559	52618793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
transcript_73689.nnic	chr19	+	739	4	Antisense	novelGene_ENSG00000167766.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCACACAAAGCCTGTTTG	NA	False	NA	NA	False	AATAAA	-11	NA	52601256	52633348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_52601356_52621098_52621247_52628157_52628340_52633038
transcript_73693.known	chr19	-	4257	4	FSM	ENSG00000269825.2	ENST00000598322.2	4257	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.7806410858642	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCTTTACTAAAAATACAA	19	False	NA	NA	False	NA	NA	NA	52690533	52650446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52654404_52655560_52655688_52660761_52660844_52690442
transcript_73696.nnic	chr19	+	632	3	Antisense	novelGene_ENSG00000167766.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTATTTGGTGGT	NA	False	NA	5	True	AATAAA	-16	NA	52601256	52627271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_52601356_52621098_52621247_52626886
transcript_73698.known	chr19	-	2726	4	FSM	ENSG00000167766.20	ENST00000536937.6	2680	4	-36	-10	-3	10	multi-exon	FALSE	canonical	3	55	junction_1	14.0554457615387	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	9802	False	NA	-10	True	AATAAA	-26	NA	52638391	52612366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52638311
transcript_73699.known	chr19	-	2599	3	FSM	ENSG00000167766.20	ENST00000301096.8	2553	3	-36	-10	-3	10	multi-exon	FALSE	canonical	3	11	junction_1	24.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	9802	False	NA	-10	True	AATAAA	-26	NA	52638391	52612366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52614798_52635065_52635154_52638311
transcript_73704.known	chr19	-	4417	5	FSM	ENSG00000213020.10	ENST00000540744.5	4417	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	13.1600721882519	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTAGTCTGTTTTTCAG	-21	True	NA	-6	True	ACTAAA	-19	NA	52735054	52702812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52735000
transcript_73712.known	chr19	-	3645	4	FSM	ENSG00000189190.11	ENST00000648973.1	3645	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.77123616632825	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCTGTCTCAAAAAAAA	23	False	NA	NA	False	NA	NA	NA	52786807	52764549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52767773_52774574_52774702_52778825_52778908_52786594
transcript_73715.known	chr19	-	3829	3	FSM	ENSG00000189190.11	ENST00000338230.3	3829	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.5	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAAAATGCTTTTGTTC	6	True	NA	NA	False	ATTAAA	-7	NA	52786763	52764194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52767773_52778825_52778908_52786594
transcript_73716.known	chr19	-	506	3	ISM	ENSG00000189190.11	ENST00000692063.1	4618	6	67	16644	18	164	5prime_fragment	FALSE	canonical	3	6	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTGTAATTTATAATAT	106	False	NA	NA	False	AATAAA	-15	NA	52786724	52780827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52781056_52781316_52781465_52786594
transcript_73717.known	chr19	-	650	2	FSM	ENSG00000189190.11	ENST00000598369.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGCATCCCCACCTTCA	-2	True	NA	NA	False	NA	NA	NA	52786771	52780991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52781465_52786594
transcript_73718.nnic	chr19	-	471	2	NNC	ENSG00000189190.11	novel	2987	9	NA	NA	-36	-2785	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGGAGCAAAACAGGAGA	NA	False	NA	NA	False	AAAACA	-25	NA	52786843	52783776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52783999_52786594
transcript_73721.nic	chr19	-	4687	5	NIC	ENSG00000198538.11	novel	684	5	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	3	52	junction_2	51.3638978271704	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGATGAGTTCGATTT	NA	False	NA	-10	True	AATAAA	-20	NA	52821646	52797409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52801703_52805144_52805263_52808006_52808134_52817943_52818032_52821585
transcript_73722.known	chr19	-	684	5	FSM	ENSG00000198538.11	ENST00000594602.5	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	59.449032792805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAAGGGAAAATTGGTA	18	False	NA	NA	False	NA	NA	NA	52857600	52801380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52801703_52805144_52805263_52808006_52808134_52817943_52818032_52857571
transcript_73724.nnic	chr19	-	648	5	NNC	ENSG00000204604.13	novel	571	5	NA	NA	-6	2171	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	78.2975095389374	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTAATTTGTAATGTA	NA	False	NA	NA	False	AATAAA	-16	NA	52857655	52835838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52836070_52845178_52845297_52849086_52849214_52854257_52854346_52857571
transcript_73725.known	chr19	-	4027	5	FSM	ENSG00000204604.13	ENST00000243639.8	4027	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	60.3339663871024	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	NA	False	NA	-10	True	AATAAA	-18	NA	52857649	52838535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52842152_52845178_52845297_52849086_52849214_52854257_52854346_52857571
transcript_73727.known	chr19	-	4558	4	FSM	ENSG00000198538.11	ENST00000457749.7	4558	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	59.4661434954565	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTCGATTTCT	-1	False	NA	-8	True	AATAAA	-22	NA	52821633	52797407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52801703_52808006_52808134_52817943_52818032_52821585
transcript_73729.nnic	chr19	-	530	4	NNC	ENSG00000204604.13	novel	4405	4	NA	NA	-6	2171	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	83.107694522763	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTAATTTGTAATGTA	NA	False	NA	NA	False	AATAAA	-16	NA	52857655	52835838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52836070_52849086_52849214_52854257_52854346_52857571
transcript_73730.known	chr19	-	4405	4	FSM	ENSG00000204604.13	ENST00000595646.6	4405	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	33.95094500403	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGAACAGGGTCTAG	-1	True	NA	NA	False	AATAAA	-21	NA	52857619	52838009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52842152_52849086_52849214_52854257_52854346_52857571
transcript_73732.known	chr19	-	1827	3	FSM	ENSG00000198538.11	ENST00000391783.6	1827	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	46	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCATACTGGAGAGAAACC	NA	False	NA	NA	False	NA	NA	NA	52821669	52800047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52801703_52817943_52818032_52821585
transcript_73734.nic	chr19	-	367	3	NIC	ENSG00000198538.11	novel	228	2	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	49	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTATATTTAAACATCACA	NA	False	NA	-19	True	ATTAAA	-8	NA	52821721	52814283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52814427_52817943_52818032_52821585
transcript_73735.nic	chr19	-	307	3	Fusion	ENSG00000198538.11_ENSG00000204604.13	novel	228	2	NA	NA	2	0	multi-exon	FALSE	canonical	3	34	junction_1	72.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTATATTTAAACATCACA	NA	False	NA	-19	True	ATTAAA	-8	NA	52857647	52814283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_52814427_52817943_52818032_52857571
transcript_73737.known	chr19	-	394	3	FSM	ENSG00000198538.11	ENST00000464469.2	394	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	26.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGACTTTCACTGTC	-1	False	NA	NA	False	ACTAAA	-44	NA	52821633	52807875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52808134_52817943_52818032_52821585
transcript_73738.known	chr19	-	228	2	FSM	ENSG00000198538.11	ENST00000542421.1	228	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTATATTTAAACATCACA	3604	False	NA	-19	True	ATTAAA	-8	NA	52818028	52814283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52814427_52817943
transcript_73750.nnic	chr19	-	1492	7	NNC	ENSG00000182986.15	novel	3897	6	NA	NA	0	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	27.8448080139428	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGAGTTTTCGTTTT	-32	True	NA	-5	True	AATACA	-22	NA	52897686	52861054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52861605_52863798_52864160_52873991_52874073_52888126_52888254_52890240_52890329_52891228_52891347_52897519
transcript_73762.known	chr19	-	590	5	FSM	ENSG00000182986.15	ENST00000594741.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	27.6620227026152	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCAGGAAATTGAGAAAGA	4	True	NA	NA	False	NA	NA	NA	52897650	52881867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52881984_52888126_52888254_52890240_52890329_52891228_52891347_52897509
transcript_73776.known	chr19	+	486	2	FSM	ENSG00000269646.1	ENST00000594546.1	486	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCGGTGTCTGAGAGG	NA	False	NA	NA	False	AATAAA	-13	NA	52923381	52924075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52923465_52923672
transcript_73780.known	chr19	-	1252	4	FSM	ENSG00000221874.4	ENST00000391777.3	1252	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	23.5513623102076	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTTTCAGTCGCAAA	1	True	NA	NA	False	NA	NA	NA	52962823	52928474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52929415_52952750_52952878_52956026_52956105_52962716
transcript_73783.known	chr19	-	553	4	FSM	ENSG00000180257.14	ENST00000457013.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	17.7951304200522	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTGGCAAGAAGTTGAA	NA	False	NA	NA	False	AAGAAA	-20	NA	52962911	52951431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962716
transcript_73784.known	chr19	-	562	4	FSM	ENSG00000180257.14	ENST00000391786.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.1710521977545	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAAACAAGCCTATTAAA	18	True	NA	NA	False	AAAAAG	-38	NA	52962851	52951335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52951585_52952750_52952861_52956026_52956105_52962726
transcript_73785.known	chr19	-	2990	4	FSM	ENSG00000242779.7	ENST00000270443.8	2990	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	10.2306728354819	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCATTTCATTTCT	6	True	NA	-9	True	AATATA	-17	NA	52993524	52968250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52993479
transcript_73787.known	chr19	-	827	4	FSM	ENSG00000242779.7	ENST00000599093.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5134350376268	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTTATAAAGAAAAGAT	5	True	NA	NA	False	AAAAAG	-1	NA	52993525	52975372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52975801_52980891_52980973_52986574_52986847_52993479
transcript_73797.known	chr19	-	495	1	FSM	ENSG00000213801.4	ENST00000550843.1	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTGGCAAATCCTTTA	NA	False	NA	0	True	NA	NA	NA	52929397	52928902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52928900_52929400
transcript_73798.known	chr19	-	2341	2	FSM	ENSG00000213801.4	ENST00000313956.4	2341	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-15	True	NA	NA	False	NA	NA	NA	52942601	52927134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52929415_52942540
transcript_73799.known	chr19	-	529	3	FSM	ENSG00000180257.14	ENST00000535506.5	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTCTTCTTTGGAGTG	-9	True	NA	NA	False	NA	NA	NA	52962878	52952588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52952878_52956026_52956105_52962716
transcript_73800.known	chr19	-	2697	5	FSM	ENSG00000180257.14	ENST00000357666.8	2697	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	27.1154937259125	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATTAGAGTTGATTCA	8	True	NA	-19	True	AATAAA	-29	NA	52962861	52949378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52960026_52960178_52962726
transcript_73805.known	chr19	-	4336	7	FSM	ENSG00000170949.18	ENST00000429604.5	4336	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	56.6168899024154	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-23	True	NA	NA	False	AATAAA	-20	NA	53103434	53066613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_73807.known	chr19	-	583	5	FSM	ENSG00000170949.18	ENST00000596966.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	51.5770055354128	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGTGTAAACCATGATAA	-5	True	NA	NA	False	NA	NA	NA	53103416	53085939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53086110_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_73810.nnic	chr19	-	962	5	NNC	ENSG00000170949.18	novel	583	5	NA	NA	-43	299	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	60.4172988472672	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGGAGACTGTGATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	53103477	53085640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53086129_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_73811.known	chr19	-	1728	4	FSM	ENSG00000170949.18	ENST00000597112.5	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	48.3068893177314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCACCCTGGCTGCCTG	-12	True	NA	NA	False	NA	NA	NA	53103423	53084953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53086322_53091412_53091530_53091636_53091721_53103264
transcript_73814.nnic	chr19	-	845	4	NNC	ENSG00000170949.18	novel	617	5	NA	NA	-43	299	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	71.6534871602368	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGGAGACTGTGATGT	NA	False	NA	NA	False	ATTAAA	-19	NA	53103477	53085640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53086129_53086261_53086322_53091636_53091721_53103264
transcript_73816.known	chr19	-	4431	6	FSM	ENSG00000170949.18	ENST00000683776.1	4431	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	57.4233402023951	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-11	True	NA	NA	False	AATAAA	-20	NA	53103422	53066613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091721_53103264
transcript_73817.known	chr19	-	2479	6	FSM	ENSG00000170954.12	ENST00000595193.5	2479	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.419339757008	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	3	True	NA	-1	True	ATTAAA	-23	NA	53132895	53107878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53115209_53115308_53115703_53115812_53116312_53116434_53122661_53122744_53132855
transcript_73822.known	chr19	-	580	5	FSM	ENSG00000170954.12	ENST00000595813.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.62916512459885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAAGAGTTTTGCTTCA	-2	True	NA	NA	False	AAAACA	-4	NA	53132900	53109805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53115209_53115308_53116312_53116434_53122403_53122617_53132855
transcript_73823.known	chr19	-	2469	5	FSM	ENSG00000170954.12	ENST00000597503.5	2469	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	9.48683298050514	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	12	True	NA	-1	True	ATTAAA	-23	NA	53132886	53107878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53132748
transcript_73824.nic	chr19	-	2418	5	NIC	ENSG00000170954.12	novel	2479	6	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	9.52627944162882	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	NA	False	NA	-1	True	ATTAAA	-23	NA	53132942	53107878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53132855
transcript_73829.known	chr19	-	2258	5	FSM	ENSG00000170954.12	ENST00000598578.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.6484977572217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATCAAAATGTGTAAAC	17	True	NA	NA	False	NA	NA	NA	53132881	53108100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53115703_53115925_53116312_53116434_53122661_53122744_53132855
transcript_73831.known	chr19	-	589	5	FSM	ENSG00000170954.12	ENST00000601110.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.7698287879102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACAAAGTGACTACGGC	-6	True	NA	NA	False	AATACA	-38	NA	53132904	53109726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53123500_53123656_53132855
transcript_73833.nic	chr19	-	844	5	NIC	ENSG00000170954.12	novel	2479	6	NA	NA	-22	154	combination_of_known_junctions	FALSE	canonical	2	8	junction_2	9.52627944162882	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTCTTCATTACTCACA	NA	False	NA	0	True	AATAAA	-17	NA	53132942	53109452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53132855
transcript_73837.known	chr19	-	2812	5	FSM	ENSG00000197937.13	ENST00000601469.2	2812	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	12.031209415516	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAACATGGCGAAACCC	1	True	NA	NA	False	NA	NA	NA	53159053	53140109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53142557_53148680_53148813_53149240_53149368_53153732_53153794_53159008
transcript_73839.nnic	chr19	-	700	5	NNC	ENSG00000197937.13	novel	604	3	NA	NA	-3	-798	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	13.8089644796415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTATAGCTTTTAACAATT	-9	True	NA	NA	False	AATAAA	-26	NA	53159063	53143211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53143540_53148680_53148810_53149240_53149368_53153732_53153794_53159008
transcript_73841.nic	chr19	-	2419	4	NIC	ENSG00000170954.12	novel	2288	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	14.4299072146089	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-12	True	NA	-1	True	ATTAAA	-23	NA	53132910	53107878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_53109909_53116312_53116434_53122403_53122617_53132855
transcript_73842.known	chr19	-	2402	4	FSM	ENSG00000170954.12	ENST00000421033.5	2402	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.43650214343336	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTGTCTCAGATTTTA	-20	True	NA	-2	True	ATTAAA	-22	NA	53132918	53107879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132748
transcript_73843.known	chr19	-	2288	4	FSM	ENSG00000170954.12	ENST00000243643.9	2288	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8.25967446224258	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-12	True	NA	-1	True	ATTAAA	-23	NA	53132910	53107878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132855
transcript_73847.known	chr19	-	511	4	FSM	ENSG00000197937.13	ENST00000597183.5	511	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.657891697365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATTAAGCCTTCAGTCA	7	True	NA	NA	False	ATTAAA	-8	NA	53159047	53142277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53142557_53148680_53148813_53153732_53153794_53159008
transcript_73850.nnic	chr19	+	1201	3	Antisense	novelGene_ENSG00000197937.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAAGAAGCTATG	NA	False	NA	NA	False	AAAAAG	-12	NA	53132436	53136584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_53132985_53133085_53133256_53136101
transcript_73853.known	chr19	-	2132	3	FSM	ENSG00000170954.12	ENST00000601493.5	2132	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	23	True	NA	-1	True	ATTAAA	-23	NA	53132875	53107878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53122661_53122744_53132855
transcript_73858.known	chr19	-	604	3	FSM	ENSG00000197937.13	ENST00000595710.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	12	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTCCCTCCTCATGTA	NA	False	NA	NA	False	NA	NA	NA	53159075	53148891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53149368_53153732_53153794_53159008
transcript_73863.known	chr19	-	4553	5	FSM	ENSG00000197937.13	ENST00000452676.6	4553	5	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	12.031209415516	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGTAGAACAATTTTTT	-6	True	NA	NA	False	AATACA	-19	NA	53159060	53138704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53142557_53148680_53148813_53149240_53149368_53153732_53153794_53158679
transcript_73866.known	chr19	-	4158	4	FSM	ENSG00000197497.11	ENST00000396424.5	4158	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.09120616516523	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAATGAATCATTTCTT	-1	True	NA	NA	False	AATAAA	-19	NA	53193358	53162423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53166348_53175444_53175572_53182883_53182944_53193311
transcript_73869.nnic	chr19	-	1056	4	NNC	ENSG00000197497.11	novel	552	3	NA	NA	-41	639	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	3.2659863237109	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCTGTGTAGTTCT	NA	False	NA	0	True	AATAAA	-31	NA	53193427	53178928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53179349_53179524_53179985_53182883_53182944_53193311
transcript_7387.nic	chr1	+	1109	8	ISM	ENSG00000122483.18	ENST00000690025.1	4752	29	-61	73099	51	-11048	5prime_fragment	FALSE	canonical	3	46	junction_1	9.68061391205567	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGTATTCTGTTGTAGA	727	False	NA	NA	False	TATAAA	-33	NA	93180662	93205631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509
transcript_73871.nnic	chr19	-	876	4	NNC	ENSG00000197497.11	novel	552	3	NA	NA	-41	634	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.86744175568088	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTTGGCTCCTGTGTA	NA	False	NA	-5	True	AATAAA	-26	NA	53193427	53178933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53179349_53179699_53179985_53182883_53182944_53193311
transcript_73873.known	chr19	-	552	3	FSM	ENSG00000197497.11	ENST00000597544.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGGTATGCCGTCCTCC	NA	False	NA	NA	False	NA	NA	NA	53193386	53179567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53179985_53182883_53182944_53193311
transcript_73879.known	chr19	+	197	3	ISM	ENSG00000269001.3	ENST00000691047.1	2921	5	73	9360	73	-337	5prime_fragment	FALSE	canonical	1	1	junction_2	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGTGGAAATGCCTG	72	False	NA	NA	False	NA	NA	NA	53197185	53204055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_53197263_53200623_53200704_53204015
transcript_73880.nnic	chr19	+	553	2	FSM	ENSG00000269001.3	ENST00000601072.2	538	2	-17	2	-6	-2	multi-exon	FALSE	canonical	3	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTACTTTGGGCCAGCGT	NA	False	NA	NA	False	AATAAA	-22	NA	53197084	53204390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53197263_53204015
transcript_73881.nnic	chr19	+	863	2	FSM	ENSG00000269001.3	ENST00000601072.2	538	2	-17	-308	-6	308	multi-exon	FALSE	canonical	3	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGTAAAAAA	NA	False	NA	NA	False	NA	NA	NA	53197084	53204700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53197263_53204015
transcript_73884.known	chr19	-	622	5	FSM	ENSG00000197928.11	ENST00000594517.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	54.5091735398731	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	237	False	NA	-2	True	AATAAA	-24	NA	53254688	53238289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254629
transcript_73888.known	chr19	-	3207	1	FSM	ENSG00000197928.11	ENST00000599328.1	3207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATGGAAAGCCTGTGG	NA	False	NA	-2	True	AATAAA	-20	NA	53241803	53238596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53238600_53241800
transcript_73889.known	chr19	-	935	5	FSM	ENSG00000197928.11	ENST00000594681.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	47.4894725176012	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-11	True	NA	NA	False	AAAAAG	-11	NA	53254831	53241923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_73890.known	chr19	-	701	5	FSM	ENSG00000197928.11	ENST00000598806.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	41.4510253190437	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCTGTAATACCAGCT	-12	True	NA	NA	False	AATACA	-23	NA	53254879	53242080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53242441_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_73891.known	chr19	-	719	4	FSM	ENSG00000197928.11	ENST00000601828.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	30.1588387633801	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTCGTAGCTGAACAAA	21	True	NA	NA	False	NA	NA	NA	53254846	53243332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254833
transcript_73893.known	chr19	+	4413	5	FSM	ENSG00000213799.13	ENST00000595091.6	4413	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	32.4220218370169	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTTTCTTTCTTTTTT	-3	True	NA	27	True	AGTAAA	-17	NA	53333748	53354869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53333793_53340823_53340926_53341234_53341323_53345505_53345633_53350817
transcript_73896.known	chr19	+	6348	4	FSM	ENSG00000213799.13	ENST00000458035.3	6348	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	31.0304509939654	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGCGAGACTCTGTCT	-3	True	NA	NA	False	NA	NA	NA	53333748	53356906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53333793_53341234_53341323_53345505_53345633_53350817
transcript_739.known	chr1	-	1083	5	FSM	ENSG00000186891.14	ENST00000379268.7	1083	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGGATGCATGCTGG	-16	True	NA	-4	True	AATAAA	-15	NA	1206592	1203507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1203969_1204033_1204237_1204398_1204487_1205369_1205493_1206384
transcript_73907.known	chr19	+	6133	4	FSM	ENSG00000203326.12	ENST00000474037.6	6133	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	14.8398861930347	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATGATGTAATTCCAT	-8	True	NA	8	True	AATAAA	-28	NA	53365704	53386590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53380721
transcript_73909.known	chr19	+	1868	4	FSM	ENSG00000203326.12	ENST00000475179.5	1868	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	28.9865869364129	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGTCAAATGATG	0	True	NA	-1	True	AATAAA	-19	NA	53365712	53386581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53384969
transcript_73911.known	chr19	+	590	4	FSM	ENSG00000203326.12	ENST00000593918.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	30.6412938514171	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATAATTCTGAGCCTT	16	True	NA	NA	False	TTTAAA	-10	NA	53365728	53392217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53391867
transcript_73913.known	chr19	+	6107	4	FSM	ENSG00000203326.12	ENST00000467003.1	6107	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	21.4527905462721	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATGTAATTCCATAGA	-6	True	NA	11	True	AATAAA	-31	NA	53365706	53386593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53365760_53372341_53372397_53375769_53375897_53380721
transcript_73919.known	chr19	+	4572	4	FSM	ENSG00000196417.13	ENST00000396408.8	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	15.7973274814304	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGATGAGTTTGATTTCT	0	True	NA	29	True	AATATA	-22	NA	53395148	53412009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53407697
transcript_73921.known	chr19	+	7588	4	FSM	ENSG00000196417.13	ENST00000594030.2	7588	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	45.18849411078	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTAAATTTTATTATT	24	False	NA	23	True	AATAAA	-17	NA	53395172	53430413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061
transcript_73925.known	chr19	+	522	3	FSM	ENSG00000196417.13	ENST00000505866.1	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	38	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGGCCTGAAACCCATAT	12	True	NA	NA	False	NA	NA	NA	53395160	53408098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53395194_53397942_53398031_53407697
transcript_73929.known	chr19	+	569	4	FSM	ENSG00000203326.12	ENST00000491101.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.8991466273873	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTTTTTGTTGTTATT	-9	True	NA	NA	False	NA	NA	NA	53365703	53376442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53376138
transcript_73938.known	chr19	+	938	6	FSM	ENSG00000160336.17	ENST00000610928.4	938	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.369204734793	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	6	True	NA	12	True	AATAAA	-22	NA	53431992	53450331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_7394.known	chr1	-	773	8	FSM	ENSG00000223745.8	ENST00000668257.1	773	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.0610911992735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGACAACAGTCTAATGCT	18	True	NA	-9	True	AATAAA	-20	NA	93345799	93264644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93264773_93305387_93305471_93324634_93324730_93325768_93325896_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_73940.known	chr19	+	1538	6	FSM	ENSG00000160336.17	ENST00000651864.1	1538	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	140.52900056572	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	-3	True	NA	NA	False	AATAAA	-19	NA	53431983	53461862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53432029_53445000_53445220_53446226_53446338_53447195_53447284_53449511_53449639_53460914
transcript_73943.nic	chr19	+	877	5	NIC	ENSG00000160336.17	novel	938	6	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	127.128625808667	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	NA	False	NA	12	True	AATAAA	-22	NA	53431930	53450331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_73944.known	chr19	+	3983	5	FSM	ENSG00000160336.17	ENST00000684525.1	3983	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	98.7379739512615	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	-3	True	NA	21	True	AATATA	-22	NA	53431983	53458261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53454649
transcript_73946.nic	chr19	+	1372	5	NIC	ENSG00000160336.17	novel	1538	6	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	137.070009484205	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	NA	False	NA	NA	False	AATAAA	-19	NA	53431930	53461862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53460914
transcript_73956.nic	chr19	+	1111	4	ISM	ENSG00000160336.17	ENST00000684525.1	3983	5	-53	7936	-53	-6	5prime_fragment	FALSE	canonical	3	90	junction_1	112.332838772403	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCATATGTGTGTCCT	NA	False	NA	6	True	AATAAA	-16	NA	53431930	53450325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511
transcript_73957.nnic	chr19	+	725	4	NIC	ENSG00000160336.17	novel	938	6	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	144.730400707277	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	-15	True	NA	12	True	AATAAA	-22	NA	53431971	53450331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53449878
transcript_73958.nnic	chr19	+	3884	4	NIC	ENSG00000160336.17	novel	3983	5	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	126.148941951788	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	-15	True	NA	21	True	AATATA	-22	NA	53431971	53458261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53454649
transcript_73961.known	chr19	+	6153	4	FSM	ENSG00000198346.11	ENST00000396403.9	6153	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	26.5497436689865	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAGAGTACCTTAATT	-9	True	NA	15	True	AATAAA	-18	NA	53467732	53496255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53467790_53483749_53483838_53486631_53486759_53490374
transcript_73968.known	chr19	+	2920	2	FSM	ENSG00000241015.2	ENST00000424846.3	2920	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTTA	-3	True	NA	19	True	NA	NA	NA	53431983	53444670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53432029_53441795
transcript_73971.known	chr19	+	4061	5	FSM	ENSG00000160336.17	ENST00000432094.6	4061	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	132.925496049479	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	NA	False	NA	21	True	AATATA	-22	NA	53445000	53458261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53454649
transcript_73975.known	chr19	+	5042	7	FSM	ENSG00000130844.19	ENST00000253144.13	5042	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	18.8716424533979	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	-1	True	NA	14	True	AATAAA	-17	NA	53521023	53580269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53522085_53522616_53522685_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_73978.known	chr19	+	1985	7	FSM	ENSG00000130844.19	ENST00000511593.6	1985	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	85.3085901627471	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGCCCTTCTGAGTAG	608	False	NA	22	True	AATAAA	-18	NA	53521855	53578081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53522085_53522616_53522685_53555844_53555909_53563762_53563793_53569303_53569386_53571603_53571731_53576696
transcript_73981.known	chr19	+	574	6	FSM	ENSG00000130844.19	ENST00000514374.5	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	66.8921520060463	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCAGATGATCATCAATT	366	False	NA	NA	False	NA	NA	NA	53537684	53576859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53537756_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_73984.known	chr19	+	4065	6	FSM	ENSG00000130844.19	ENST00000449416.6	4065	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.3656058126173	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	-11	True	NA	14	True	AATAAA	-17	NA	53538144	53580269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53538297_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_73995.known	chr19	+	572	3	FSM	ENSG00000130844.19	ENST00000649816.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	71.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTCCCAATTTTTAA	585	False	NA	-32	True	NA	NA	NA	53521832	53523515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53522085_53522616_53522685_53523263
transcript_73996.known	chr19	+	1595	3	FSM	ENSG00000130844.19	ENST00000513929.6	1595	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	87	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTAATCTTCCCATATT	NA	False	NA	NA	False	NA	NA	NA	53520982	53532972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53522085_53522616_53522685_53532547
transcript_73998.known	chr19	-	1228	4	FSM	ENSG00000268864.4	ENST00000600193.4	1228	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATATATTATATGTATT	NA	False	NA	NA	False	AATAAA	-26	NA	53603497	53599627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53600435_53601264_53601373_53601996_53602164_53603351
transcript_74003.nnic	chr19	+	2047	4	NNC	ENSG00000179820.16	novel	1579	3	NA	NA	202	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	158.808759903924	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTTGTGCTTTCTTA	-17	True	NA	12	True	TATAAA	-8	NA	53866359	53876432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53866418_53869753_53869839_53873527_53874812_53875812
transcript_74005.nnic	chr19	+	2072	4	NNC	ENSG00000179820.16	novel	3054	3	NA	NA	-22	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	151.895431867526	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTTGTGCTTTCTTA	-33	True	NA	12	True	TATAAA	-8	NA	53867860	53876432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53867944_53869753_53869839_53873527_53874812_53875812
transcript_74011.known	chr19	+	843	3	FSM	ENSG00000179820.16	ENST00000336967.8	843	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	182.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCGTGGCGGTGTACG	826	False	NA	NA	False	NA	NA	NA	53865583	53874140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53865729_53869753_53869839_53873527
transcript_74012.known	chr19	+	1579	3	FSM	ENSG00000179820.16	ENST00000421337.6	1579	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	149.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTTCTTTTCTTTTT	-7	True	NA	NA	False	NA	NA	NA	53866152	53874756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53866418_53869753_53869839_53873527
transcript_74014.known	chr19	+	3054	3	FSM	ENSG00000179820.16	ENST00000391770.9	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	122.5	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	-11	True	NA	15	True	TATAAA	-11	NA	53867882	53876435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53867944_53869753_53869839_53873527
transcript_74018.known	chr19	+	777	3	FSM	ENSG00000179820.16	ENST00000448420.5	777	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	177.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCATCAGCGACCCCAAC	-11	True	NA	NA	False	NA	NA	NA	53867882	53874094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53867944_53869689_53869839_53873527
transcript_74022.known	chr19	-	423	2	FSM	ENSG00000232220.2	ENST00000413496.2	423	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAGGGAGGGGAGACAG	5947	False	NA	NA	False	AAAAAG	-1	NA	53876049	53874625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53874822_53875822
transcript_74024.known	chr19	+	2037	16	FSM	ENSG00000126583.12	ENST00000682268.1	2037	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	12.963881448942	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAAACCAAGGTTCAAA	-14	True	NA	NA	False	AATACA	-4	NA	53882196	53903441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53903358
transcript_74032.nnic	chr19	+	1878	8	NNC	ENSG00000126583.12	novel	2997	19	NA	NA	4638	0	intron_retention	FALSE	canonical	3	10	junction_1	15.4166620702328	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGATATTTTCTTGT	NA	False	NA	20	True	AATAAA	-21	NA	53899263	53907652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53899572_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706
transcript_74044.nnic	chr19	+	875	2	NNC	ENSG00000130433.8	novel	2501	4	NA	NA	18784	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTGCTTTGGAGTCTA	NA	False	NA	11	True	ATTAAA	-16	NA	54011661	54012666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_54011821_54011950
transcript_74045.nnic	chr19	+	833	2	NNC	ENSG00000130433.8	novel	2501	4	NA	NA	18815	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTGCTTTGGAGTCTA	NA	False	NA	11	True	ATTAAA	-16	NA	54011692	54012666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_54011810_54011950
transcript_74046.known	chr19	-	967	9	FSM	ENSG00000189068.11	ENST00000338372.7	967	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.05326872164704	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTTATTTATGGATTA	-5	True	NA	NA	False	AATAAA	-27	NA	54063897	54040824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54041081_54041778_54041817_54041915_54041954_54042168_54042197_54042276_54042370_54051409_54051449_54058305_54058591_54058696_54058733_54063743
transcript_74048.nic	chr19	-	600	5	ISM	ENSG00000189068.11	ENST00000338372.7	967	9	21381	0	15907	0	3prime_fragment	FALSE	canonical	1	1	junction_3	0.82915619758885	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTTATTTATGGATTA	-4	True	NA	NA	False	AATAAA	-27	NA	54042516	54040824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_54041081_54041778_54041817_54041915_54041954_54042168_54042197_54042276
transcript_74049.known	chr19	-	1041	8	FSM	ENSG00000189068.11	ENST00000447872.5	1041	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.16057691494799	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCTGACTTATTTATGG	-15	True	NA	NA	False	AATAAA	-23	NA	54063953	54040828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54041081_54041778_54041817_54041915_54041954_54042226_54042370_54051409_54051449_54058305_54058591_54058696_54058733_54063743
transcript_74053.known	chr19	+	1833	14	FSM	ENSG00000105618.14	ENST00000321030.9	1833	14	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	80.0581149862269	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	-8	True	NA	26	True	ATTAAA	-16	NA	54115753	54131713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_74056.known	chr19	+	2269	13	FSM	ENSG00000105618.14	ENST00000419967.5	2269	13	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	82.9290191803944	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGGAGTGATCATTTTT	9472	False	NA	32	True	ATTAAA	-22	NA	54115409	54131719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129371_54131306
transcript_74064.known	chr19	-	804	6	FSM	ENSG00000105619.14	ENST00000391758.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	77.6489536310696	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	572	False	NA	-7	True	AATAAA	-16	NA	54115074	54107019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115039
transcript_74074.known	chr19	+	379	4	FSM	ENSG00000170906.16	ENST00000303553.5	379	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	1576.50647530122	5171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-1	True	NA	18	True	AATAAA	-15	NA	54102884	54106961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102960_54103113_54103189_54105933_54106012_54106810
transcript_74080.known	chr19	+	338	4	FSM	ENSG00000170906.16	ENST00000391763.3	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1568.53420605212	14214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	13	True	NA	22	True	AATAAA	-19	NA	54102868	54106965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102899_54103113_54103189_54105933_54106012_54106810
transcript_74081.known	chr19	-	1180	6	FSM	ENSG00000105619.14	ENST00000391759.6	1180	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	9.49947366963033	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-11	True	NA	-7	True	AATAAA	-16	NA	54115657	54107019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_74082.known	chr19	+	654	5	FSM	ENSG00000170906.16	ENST00000419113.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1369.76421328636	7045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTTAGTAAACATTCAT	3074	False	NA	NA	False	NA	NA	NA	54102820	54108704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106810_54106979_54108439
transcript_74083.known	chr19	+	435	5	FSM	ENSG00000170906.16	ENST00000391762.5	435	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	1310.10724751831	2795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-4	True	NA	18	True	AATAAA	-15	NA	54102851	54106961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106352_54106447_54106810
transcript_74084.known	chr19	+	445	5	FSM	ENSG00000170906.16	ENST00000451517.5	445	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	1338.37401349548	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	-1	True	NA	18	True	AATAAA	-15	NA	54102854	54106961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102889_54103113_54103189_54105596_54105704_54105933_54106012_54106810
transcript_74085.known	chr19	+	541	3	FSM	ENSG00000170906.16	ENST00000484103.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	3143	junction_2	196	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	21	False	NA	18	True	AATAAA	-15	NA	54102876	54106961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54103189_54105933_54106012_54106810
transcript_74086.known	chr19	-	774	6	FSM	ENSG00000105619.14	ENST00000391757.1	774	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	69.7492652291048	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	1	True	NA	-7	True	AATAAA	-16	NA	54115288	54107019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54107170_54108025_54108208_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_74087.known	chr19	-	737	5	FSM	ENSG00000105619.14	ENST00000420715.6	737	5	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_3	84.0862652280383	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	4	True	NA	-7	True	AATAAA	-16	NA	54115285	54107019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54114441_54114701_54115246
transcript_74088.known	chr19	+	1767	13	FSM	ENSG00000105618.14	ENST00000391755.1	1767	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	207.100954984654	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTCCTTGGGGAGT	2509	False	NA	22	True	ATTAAA	-12	NA	54118270	54131709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128090_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_74089.known	chr19	+	2818	18	FSM	ENSG00000088038.19	ENST00000221232.11	2818	18	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	41.9423727244631	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	-3	True	NA	27	True	AATAAA	-14	NA	54137761	54155681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
transcript_74097.known	chr19	-	1381	4	FSM	ENSG00000105617.4	ENST00000222224.4	1381	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	4.54606056566195	919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAAGGTTCTTCTTGGGT	-9	True	NA	NA	False	NA	NA	NA	54159721	54155160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54155941_54156762_54157026_54158281_54158462_54159563
transcript_741.nnic	chr1	-	659	3	NNC	ENSG00000078808.19	novel	2137	7	NA	NA	2	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	272	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCAGCTTCATTCTTTG	-4	True	NA	-14	True	AATATA	-11	NA	1232065	1216920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_1217003_1228543_1228947_1231891
transcript_74100.known	chr19	-	2413	15	FSM	ENSG00000167608.12	ENST00000617472.4	2413	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	10.8918617812211	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCTGACTCTCGGGTGA	7877	False	NA	-70	True	NA	NA	NA	54173250	54160164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54165418_54165567_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172102_54173038
transcript_74104.nnic	chr19	-	1936	12	NIC	ENSG00000167608.12	novel	2362	15	NA	NA	36	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	10.338086527876	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	7913	False	NA	-13	True	AATAAA	-19	NA	54173214	54160107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172084_54173038
transcript_74106.nnic	chr19	-	1492	10	NNC	ENSG00000167608.12	novel	2362	15	NA	NA	-133	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	11.8018621673566	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	9199	False	NA	-13	True	AATAAA	-19	NA	54164849	54160107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54164731
transcript_74110.nnic	chr19	-	682	4	NIC	ENSG00000167608.12	novel	1560	9	NA	NA	986	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	17.3781471969828	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	5	True	NA	-13	True	AATAAA	-19	NA	54162281	54160107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_54160375_54160466_54160546_54160877_54161034_54162101
transcript_74111.nnic	chr19	-	743	4	NNC	ENSG00000167608.12	novel	1560	9	NA	NA	972	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.3781471969828	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	-9	True	NA	-13	True	AATAAA	-19	NA	54162295	54160107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_54160375_54160466_54160546_54160877_54161081_54162101
transcript_74115.nic	chr19	-	1268	3	ISM	ENSG00000167608.12	ENST00000613492.4	537	4	-54	5675	36	-612	5prime_fragment	FALSE	canonical	3	27	junction_2	7.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGAAAGGAAGGCGC	7913	False	NA	NA	False	AAGAAA	-42	NA	54173214	54168782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_54169661_54171869_54172084_54173038
transcript_74116.nic	chr19	-	1174	3	ISM	ENSG00000167608.12	ENST00000613492.4	537	4	-54	5769	36	-706	5prime_fragment	FALSE	canonical	3	27	junction_2	7.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAGAAAAGAAAAG	7913	False	NA	NA	False	AAGAAA	-32	NA	54173214	54168876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_54169661_54171869_54172084_54173038
transcript_74117.nic	chr19	-	1040	3	ISM	ENSG00000167608.12	ENST00000613492.4	537	4	-54	5903	36	-840	5prime_fragment	FALSE	canonical	3	27	junction_2	7.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATAGAGA	7913	False	NA	NA	False	AAAAAG	-29	NA	54173214	54169010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_54169661_54171869_54172084_54173038
transcript_74118.nic	chr19	-	859	3	ISM	ENSG00000167608.12	ENST00000613492.4	537	4	-54	6084	36	-1021	5prime_fragment	FALSE	canonical	3	27	junction_2	7.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCGCACGCCTGTA	7913	False	NA	NA	False	AATACA	-14	NA	54173214	54169191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_54169661_54171869_54172084_54173038
transcript_74119.nnic	chr19	-	556	3	NNC	ENSG00000167608.12	novel	2362	15	NA	NA	36	-1992	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTGCTGGCTTCTT	7913	False	NA	NA	False	AATAGA	-16	NA	54173214	54170162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_54170329_54171869_54172084_54173038
transcript_74120.known	chr19	-	450	2	FSM	ENSG00000167608.12	ENST00000611183.4	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	1637	False	NA	-13	True	AATAAA	-19	NA	54160649	54160107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54160375_54160466
transcript_74121.known	chr19	-	1560	9	FSM	ENSG00000167608.12	ENST00000613723.4	1560	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	12.5399362039845	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	9332	False	NA	-13	True	AATAAA	-19	NA	54164716	54160107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163652_54163888_54164433
transcript_74122.known	chr19	-	3039	2	FSM	ENSG00000125505.17	ENST00000494142.1	3039	2	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	0	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCATCGTGTCCGTGCA	8889	False	NA	-9	True	AATAAA	-10	NA	54180790	54173418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54174432_54178764
transcript_74123.known	chr19	+	2160	4	FSM	ENSG00000170892.13	ENST00000396388.3	2160	4	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	20.4178571081514	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTTTATTTTGTCA	20	True	NA	8	True	NA	NA	NA	54191307	54194532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54191608_54191720_54191965_54192115_54192374_54193174
transcript_74124.known	chr19	+	2372	3	FSM	ENSG00000170892.13	ENST00000496583.1	2372	3	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	23	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	2	True	NA	10	True	AATAAA	-18	NA	54190342	54193666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54191965_54192115_54192374_54193174
transcript_74136.known	chr19	+	713	5	FSM	ENSG00000170889.14	ENST00000302907.9	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	4611	junction_1	1388.26411392069	177232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-3	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_74137.known	chr19	+	709	4	FSM	ENSG00000170889.14	ENST00000391753.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	7190	junction_1	405.095050574553	63624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	-7	True	NA	26	True	AATAAA	-20	NA	54201132	54207647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54201282_54201486_54201610_54206275_54206463_54207397
transcript_74138.known	chr19	+	772	5	FSM	ENSG00000170889.14	ENST00000391752.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	3291.45974455104	50398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	11	False	NA	26	True	AATAAA	-20	NA	54200871	54207647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_74139.known	chr19	+	1600	3	FSM	ENSG00000170889.14	ENST00000441429.1	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7190	junction_1	291	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGCGCTTTACAATTG	-2	True	NA	9	True	AATAAA	-3	NA	54201159	54207630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54201282_54201486_54201610_54206275
transcript_74140.known	chr19	+	510	4	FSM	ENSG00000170889.14	ENST00000391751.7	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	2837.48484087972	15553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	13	False	NA	26	True	AATAAA	-20	NA	54200873	54207647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54207397
transcript_74141.known	chr19	+	944	6	FSM	ENSG00000170889.14	ENST00000445961.5	944	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3613.29038965871	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	11	False	NA	26	True	AATAAA	-20	NA	54200871	54207647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_74142.known	chr19	+	752	6	FSM	ENSG00000170889.14	ENST00000436445.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	3543.57736757644	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGGGCCAGGGTGGG	10	True	NA	-99	True	NA	NA	NA	54200870	54207522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_74143.known	chr19	+	956	5	FSM	ENSG00000170889.14	ENST00000495002.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	3562.13232313175	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTGTGTGGGGGTCT	18	False	NA	23	True	AATAAA	-17	NA	54200878	54207644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206725_54207397
transcript_74150.known	chr19	+	1073	8	FSM	ENSG00000167615.17	ENST00000439657.5	1073	8	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	73.4116156076302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCGCCTGTGAGTCGGAG	-24	True	NA	NA	False	NA	NA	NA	54449189	54455443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54449307_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363
transcript_74151.known	chr19	+	3658	16	FSM	ENSG00000167615.17	ENST00000326764.10	3658	16	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	84.1642837946517	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	-15	True	NA	16	True	ATTAAA	-16	NA	54449198	54462016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_74161.known	chr19	-	1931	7	FSM	ENSG00000160439.16	ENST00000610356.4	1931	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	5.20949986936259	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTACCCGAGTCGTAG	8075	False	NA	-14	True	AAAAAG	-4	NA	55063217	55044323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
transcript_74164.known	chr19	-	2811	2	FSM	ENSG00000160439.16	ENST00000592423.1	2811	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTTAGAGACCCTGT	NA	False	NA	-6	True	AATAAA	-22	NA	55043107	55039107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55039265_55040453
transcript_74165.known	chr19	-	702	2	FSM	ENSG00000160439.16	ENST00000588941.1	702	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCCTGTCCACCCTCT	10	True	NA	NA	False	NA	NA	NA	55069502	55067194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55067716_55069321
transcript_74169.known	chr19	+	745	2	FSM	ENSG00000131037.15	ENST00000587715.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	0	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCCGTGCTTAGCAGA	4113	False	NA	6	True	TATAAA	-1	NA	55087068	55087905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55087436_55087527
transcript_74180.known	chr19	-	967	14	FSM	ENSG00000105048.18	ENST00000291901.12	967	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_13	452.845598515294	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-1	True	NA	-2	True	NA	NA	NA	55149206	55132793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_74186.known	chr19	-	934	13	FSM	ENSG00000105048.18	ENST00000356783.9	934	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_12	441.241139350759	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-1	True	NA	-2	True	NA	NA	NA	55149206	55132793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_74196.known	chr19	-	1065	11	FSM	ENSG00000105048.18	ENST00000587465.6	1065	11	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_10	315.128608666367	1607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACCCGCTGGGTTCTCTG	2	True	NA	-43	True	AATAAA	-12	NA	55146949	55132834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680
transcript_742.nnic	chr1	-	951	8	NNC	ENSG00000184163.3	novel	1036	8	NA	NA	-569	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	7.46146563268605	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTGCCTTCGAGTGCTG	NA	False	NA	-13	True	AATAAA	-16	NA	1247291	1242452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1247167
transcript_74218.known	chr19	-	995	10	FSM	ENSG00000105048.18	ENST00000585321.6	995	10	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_9	189.967118662256	2588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	9	True	NA	-73	True	NA	NA	NA	55146942	55132864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680
transcript_74219.known	chr19	-	901	12	NNC	ENSG00000105048.18	novel	934	13	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	440.944459687301	1381	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTGGGTTCTCTGATG	-1	True	NA	-40	True	AATAAA	-15	NA	55149206	55132831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147106_55147169_55149160
transcript_74220.known	chr19	-	800	10	FSM	ENSG00000105048.18	ENST00000593046.5	800	10	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_8	412.039851842237	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTGCTGTGGGGGGCTC	9783	False	NA	NA	False	NA	NA	NA	55147346	55137102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125
transcript_74221.known	chr19	-	880	10	FSM	ENSG00000105048.18	ENST00000587089.6	880	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	426.934666988455	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTCCCATCGGTAGC	9994	False	NA	-84	True	NA	NA	NA	55146454	55132875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146433
transcript_74222.known	chr19	-	1016	14	FSM	ENSG00000105048.18	ENST00000587758.5	1016	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	497.488949061052	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	8538	False	NA	-2	True	NA	NA	NA	55149193	55132793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55147998_55148094_55149160
transcript_74226.known	chr19	-	669	5	FSM	ENSG00000129991.13	ENST00000588882.1	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	101.75061424876	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGACTCCATGTCTAT	9950	False	NA	-6	True	AATAAA	-16	NA	55156725	55151770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602
transcript_74231.known	chr19	-	699	4	FSM	ENSG00000129991.13	ENST00000585806.5	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	17.5941909605289	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	5	True	NA	-2	True	AATAAA	-20	NA	55156481	55151766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200
transcript_74235.known	chr19	-	893	4	FSM	ENSG00000167646.14	ENST00000588076.1	893	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	22.0504472113883	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTCAGGCCCTTGACT	1	True	NA	NA	False	NA	NA	NA	55160689	55158793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55159450_55159532_55159608_55159898_55160011_55160639
transcript_74239.known	chr19	-	1020	4	FSM	ENSG00000167646.14	ENST00000587789.2	1020	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	20.3960780543711	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTGGCTGACTAGGGG	6016	False	NA	-92	True	NA	NA	NA	55160659	55158752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55159450_55159532_55159721_55159898_55160014_55160639
transcript_74242.known	chr19	-	843	8	FSM	ENSG00000129991.13	ENST00000344887.10	843	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	156.575338845854	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	-1	True	NA	-2	True	AATAAA	-20	NA	55157732	55151766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602_55156645_55157049_55157134_55157295_55157309_55157578
transcript_74243.known	chr19	+	857	2	FSM	ENSG00000267649.1	ENST00000585911.1	857	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTACACAGCAATAAAAATA	7267	False	NA	NA	False	GATAAA	-2	NA	55216659	55221616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55216710_55220809
transcript_74244.known	chr19	+	748	1	FSM	ENSG00000267649.1	ENST00000591484.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTCTTGAGTAA	7289	False	NA	NA	False	AAAACA	-29	NA	55216681	55217429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55216700_55217400
transcript_74245.known	chr19	-	1246	3	FSM	ENSG00000180089.6	ENST00000327042.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGAGGACTGTTTGGTC	4	True	NA	-3	True	GATAAA	-22	NA	55228763	55226637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55227564_55228190_55228438_55228690
transcript_74246.known	chr19	-	1508	2	FSM	ENSG00000180089.6	ENST00000589190.1	1508	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGAGGACTGTTTGGT	-6	True	NA	-4	True	GATAAA	-21	NA	55228773	55226638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55227564_55228190
transcript_74247.known	chr19	-	3984	24	FSM	ENSG00000105063.19	ENST00000412770.7	3984	24	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_23	49.1358981187069	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTGGTCAGACCTTAC	-21	True	NA	-17	True	AATAAA	-17	NA	55259017	55229778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55230532_55230612_55230685_55230773_55230885_55231409_55231492_55231597_55231669_55231801_55231983_55232074_55232212_55236642_55236822_55236912_55236971_55239404_55239503_55239593_55239684_55239825_55239912_55239998_55240115_55240235_55240301_55240944_55241080_55241238_55241392_55241476_55241640_55242165_55242280_55242375_55242489_55245119_55245186_55245264_55245403_55245491_55245679_55246876_55247110_55258434
transcript_74249.known	chr19	-	1768	9	FSM	ENSG00000133265.11	ENST00000255631.9	1768	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	215.916324938621	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTATAGAGCCATTGT	7420	False	NA	-23	True	AATAAA	-14	NA	55280360	55262230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034_55280109_55280217
transcript_74256.known	chr19	-	1635	8	FSM	ENSG00000133265.11	ENST00000433386.7	1635	8	0	0	0	0	multi-exon	TRUE	canonical	3	523	junction_7	66.385700451903	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCATTGTGTCATTTA	-9	True	NA	-15	True	AATAAA	-22	NA	55280110	55262222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
transcript_7426.known	chr1	-	2599	5	FSM	ENSG00000223745.8	ENST00000655606.1	2599	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.4171171105366	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCAGGAGAATGG	-29	True	NA	NA	False	NA	NA	NA	93345846	93337062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_74268.nic	chr19	+	1191	6	ISM	ENSG00000133247.14	ENST00000255613.8	2286	9	-19	3747	4	-5	5prime_fragment	FALSE	canonical	3	121	junction_3	30.8220700148449	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGCCAAATGCTGCC	NA	False	NA	NA	False	NA	NA	NA	55339856	55344374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_55339958_55341793_55342047_55342214_55342381_55342741_55342852_55343679_55343844_55343977
transcript_7427.known	chr1	-	2871	5	FSM	ENSG00000223745.8	ENST00000653362.1	2871	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	12.871965661856	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAGACTCCGTCTCCAAA	-29	True	NA	NA	False	NA	NA	NA	93345846	93336974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345539
transcript_74271.nic	chr19	+	1025	5	ISM	ENSG00000133247.14	ENST00000445196.5	2077	8	-61	3746	4	-5	5prime_fragment	FALSE	canonical	3	53	junction_2	59.8388460784464	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGCCAAATGCTGCC	NA	False	NA	NA	False	NA	NA	NA	55339856	55344374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_55339958_55341793_55342047_55342741_55342852_55343679_55343844_55343977
transcript_74277.known	chr19	-	1566	5	FSM	ENSG00000160471.13	ENST00000326529.9	1566	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.1242283656583	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCAGAAGGTTCCTGGA	-5	True	NA	-14	True	TATAAA	-38	NA	55354719	55349703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55350801_55353606_55353775_55353865_55353967_55354409_55354540_55354649
transcript_74278.known	chr19	-	479	4	FSM	ENSG00000160471.13	ENST00000589467.1	479	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	10.0332779621949	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTTCTTCTTAATG	-5	True	NA	NA	False	NA	NA	NA	55354719	55353596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55353775_55353865_55353967_55354409_55354540_55354649
transcript_74281.known	chr19	-	3058	8	FSM	ENSG00000267706.3	ENST00000591954.3	3058	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	9.12498252724075	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGACGCCACCTCTGAG	6481	False	NA	NA	False	NA	NA	NA	55359516	55352300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55352327_55352532_55352737_55353311_55353394_55353606_55353775_55353865_55354540_55354649_55355096_55355259_55355346_55358144
transcript_74284.known	chr19	+	605	5	FSM	ENSG00000160472.5	ENST00000291934.4	605	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.38484800354236	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTCTCTTCTCTGAA	1	True	NA	NA	False	AATACA	-16	NA	55376825	55378246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55376912_55376990_55377027_55377592_55377719_55377801_55377887_55377974
transcript_74285.known	chr19	-	695	2	FSM	ENSG00000233493.4	ENST00000444469.4	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCATGTCTGTCTGGG	-10	True	NA	-2	True	GATAAA	-17	NA	55384292	55379243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55379368_55383721
transcript_74294.known	chr19	-	2559	4	FSM	ENSG00000108106.14	ENST00000264552.14	2559	4	0	0	0	0	multi-exon	FALSE	canonical	3	8824	junction_1	528.676334505968	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGACAGAGTTCCTCAA	-3	True	NA	-1	True	AATAAA	-18	NA	55407788	55399744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55401763_55404287_55404479_55406814_55406963_55407586
transcript_74295.known	chr19	+	4209	5	FSM	ENSG00000108107.15	ENST00000344063.7	4209	5	0	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	945.461791930271	56507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTCATTATGAAATATGC	-1	True	NA	15	True	AATAAA	-17	NA	55385931	55392085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55388242
transcript_74296.known	chr19	+	616	5	FSM	ENSG00000108107.15	ENST00000558815.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	2528.17002741113	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACATGCCTATGACTA	-1	True	NA	48	True	TATAAA	-34	NA	55385931	55391803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55391553
transcript_74297.known	chr19	+	1692	4	FSM	ENSG00000108107.15	ENST00000560881.5	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	3972	junction_1	1065.61573228293	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCAATAAAGTCAGCT	10	False	NA	3	True	NA	NA	NA	55385942	55388343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55388049_55388242
transcript_74298.known	chr19	+	670	5	FSM	ENSG00000108107.15	ENST00000560055.5	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	2534.61746374083	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTGAGTTTTACGGCA	3	False	NA	19	True	ATTAAA	-22	NA	55385935	55403250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55402942
transcript_74299.known	chr19	+	444	4	FSM	ENSG00000108107.15	ENST00000558131.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_2	2898.92474318784	6049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCGACTGGGCCTCC	6	True	NA	33	True	AATAAA	-18	NA	55386349	55388373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55386439_55386569_55386675_55387929_55388049_55388242
transcript_74300.known	chr19	+	573	4	FSM	ENSG00000108107.15	ENST00000428193.6	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	2657.39538311901	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGAGCGTGGGCTCTGGC	-1	True	NA	NA	False	NA	NA	NA	55385931	55387610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387284
transcript_74301.known	chr19	+	5620	2	FSM	ENSG00000108107.15	ENST00000426763.3	5620	2	0	0	0	0	multi-exon	FALSE	canonical	3	6466	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCATGTGGTCTTGAAAA	6	True	NA	30	True	AATAAA	-32	NA	55386349	55392100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55386439_55386569
transcript_74304.known	chr19	-	1122	6	FSM	ENSG00000063241.8	ENST00000085068.7	1122	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	106.248011746103	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	-13	True	NA	-13	True	AATAAA	-13	NA	55461645	55452988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455379_55455635_55455846_55456348_55456490_55461511
transcript_74305.known	chr19	-	1566	5	FSM	ENSG00000063241.8	ENST00000438389.6	1566	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	75.6224173112709	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	2403	False	NA	-9	True	AATAAA	-17	NA	55462343	55452984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55456348_55456490_55461511
transcript_74306.known	chr19	-	1075	6	FSM	ENSG00000063241.8	ENST00000425675.7	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	49.4546256683841	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-10	True	NA	-9	True	AATAAA	-17	NA	55461642	55452984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55455635_55455846_55456348_55456490_55461511
transcript_74307.known	chr19	-	1337	2	FSM	ENSG00000283567.2	ENST00000635964.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCAAAAAGCAAGATTC	-5	True	NA	-13	True	AATAAA	-17	NA	55464751	55463000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55463968_55464381
transcript_74308.nnic	chr19	+	993	4	NNC	ENSG00000090971.5	novel	1350	3	NA	NA	-15	2	intron_retention	FALSE	non_canonical	0	0	junction_3	82.7539861409843	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGTCTCTTCTCTGATG	188	False	NA	45	True	AATAAA	-17	NA	55485172	55487570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55485259_55485660_55485781_55486407_55486480_55486855
transcript_74309.nnic	chr19	+	488	3	NIC	ENSG00000090971.5	novel	416	3	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	83.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	188	False	NA	41	True	AATAAA	-13	NA	55485172	55487566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_55485259_55485660_55485730_55487233
transcript_74312.nnic	chr19	+	719	3	NNC	ENSG00000090971.5	novel	1350	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	79.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	188	False	NA	41	True	AATAAA	-13	NA	55485172	55487566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55485259_55485660_55485781_55487053
transcript_74313.known	chr19	+	1011	2	FSM	ENSG00000090971.5	ENST00000591590.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGCCTGGGGGGCCCCT	8	True	NA	NA	False	GGGGCT	-14	NA	55485194	55486607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55485259_55485660
transcript_74314.known	chr19	+	416	3	FSM	ENSG00000090971.5	ENST00000587400.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	15	True	NA	41	True	AATAAA	-13	NA	55485233	55487566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55485259_55485660_55485719_55487233
transcript_74315.known	chr19	+	1350	3	FSM	ENSG00000090971.5	ENST00000205194.5	1350	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	8	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	1	True	NA	41	True	AATAAA	-13	NA	55485187	55487566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55485259_55485660_55485781_55486407
transcript_74317.known	chr19	-	2251	4	FSM	ENSG00000187550.9	ENST00000413299.6	2251	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.62466929133727	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTGCTGCTGCGAGTC	6	True	NA	-4	True	AATAAA	-19	NA	55537133	55528610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55530324_55531142_55531346_55536041_55536297_55537053
transcript_74318.known	chr19	+	1546	6	FSM	ENSG00000173581.8	ENST00000308964.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	40.00799920016	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCAGCCTCTTCCT	17	True	NA	16	True	AATAAA	-1	NA	55648034	55653161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55648278_55649001_55649078_55649204_55649310_55649407_55649585_55651282_55651496_55652429
transcript_74319.known	chr19	+	591	2	FSM	ENSG00000171425.10	ENST00000585995.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGGCGGCCCCACGGCT	-1	True	NA	NA	False	NA	NA	NA	55641030	55644990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55641184_55644552
transcript_74320.known	chr19	+	1100	2	FSM	ENSG00000171425.10	ENST00000588537.1	1100	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTCGAGGTTTGTTTT	183	False	NA	16	True	AATAAA	-16	NA	55643809	55645621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55643841_55644552
transcript_74321.known	chr19	+	1197	2	FSM	ENSG00000171425.10	ENST00000270451.6	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	22	True	NA	18	True	AATAAA	-18	NA	55643648	55645623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55643775_55644552
transcript_74323.nnic	chr19	+	1477	13	NNC	ENSG00000063244.13	novel	3022	12	NA	NA	-19	-4	at_least_one_novel_splicesite	FALSE	non_canonical	1	7	junction_12	28.6767181990315	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATGGAGCGGCTGTGTG	-25	True	NA	28	True	ATTAAA	-18	NA	55655015	55674711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669170_55669443_55669693_55673933_55673963_55674633
transcript_74327.known	chr19	+	2146	12	FSM	ENSG00000063244.13	ENST00000308924.9	2146	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.8793975019372	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	-6	True	NA	33	True	ATTAAA	-23	NA	55655034	55674716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669182_55669443_55669693_55673933
transcript_74328.nnic	chr19	+	939	9	NNC	ENSG00000063244.13	novel	2146	12	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	34.128433893163	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	-24	True	NA	33	True	ATTAAA	-23	NA	55655016	55674716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668537_55674637
transcript_7433.known	chr1	-	1613	4	FSM	ENSG00000223745.8	ENST00000457387.2	1613	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.8193010820572	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGATAGTTCTTATTTT	-29	True	NA	NA	False	AAAAAG	-14	NA	93345846	93338130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93339537_93339648_93339680_93340457_93340511_93345723
transcript_74331.nnic	chr19	-	671	3	NNC	ENSG00000142409.6	novel	1657	2	NA	NA	-128	-882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	88.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATTTGTGGGCTACGTGG	88	False	NA	NA	False	AATAAA	-23	NA	56121423	56102531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_56102862_56103138_56103228_56121171
transcript_74333.known	chr19	-	1657	2	FSM	ENSG00000142409.6	ENST00000587279.1	1657	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGAAAAAGCCCTA	12	True	NA	NA	False	NA	NA	NA	56121250	56101649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56103228_56121171
transcript_74335.nnic	chr19	+	764	3	NNC	ENSG00000167685.15	novel	1943	5	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	125.5	124	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	5	True	NA	22	True	AATAAA	-22	NA	56141267	56160893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_56141358_56146246_56146278_56160250
transcript_74337.nnic	chr19	+	835	3	NNC	ENSG00000167685.15	novel	1943	5	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	125.5	119	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTGTCTGGAGT	5	True	NA	22	True	AATAAA	-22	NA	56141267	56160893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_56141358_56146246_56146367_56160268
transcript_74340.nic	chr19	+	654	2	ISM	ENSG00000167685.15	ENST00000337080.8	1943	5	-19	14083	-15	-235	5prime_fragment	FALSE	canonical	3	251	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTGGTCCCATTGTGAG	5	True	NA	NA	False	AATAAA	-15	NA	56141267	56146810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_56141358_56146246
transcript_74350.nic	chr19	-	2061	6	NIC	ENSG00000131848.10	novel	2151	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	13.1666244725062	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	-19	True	NA	-6	True	AATAAA	-30	NA	56314874	56221302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225049_56313282_56313385_56314680
transcript_74354.known	chr19	-	2151	6	FSM	ENSG00000131848.10	ENST00000683990.1	2151	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	14.2632394637403	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	16	True	NA	-6	True	AATAAA	-30	NA	56314839	56221302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225174_56313282_56313385_56314680
transcript_74365.nic	chr19	-	1567	3	NIC	ENSG00000131848.10	novel	570	2	NA	NA	-15	806	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	28	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAGAAACGAGACTGCAT	-19	True	NA	NA	False	AAAACA	-19	NA	56314874	56262411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_56263683_56313282_56313385_56314680
transcript_74367.known	chr19	-	686	3	FSM	ENSG00000131848.10	ENST00000589279.5	686	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAAGTCTAAAATAATTT	22	True	NA	NA	False	NA	NA	NA	56314833	56274538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56274909_56313282_56313385_56314619
transcript_74368.known	chr19	-	686	3	FSM	ENSG00000131848.10	ENST00000591078.5	686	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	27	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGTGTTCCTCTACA	-4	True	NA	NA	False	AATAAA	-7	NA	56314859	56274503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56274909_56313282_56313385_56314680
transcript_74369.known	chr19	-	314	3	FSM	ENSG00000131848.10	ENST00000585670.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	22.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCAGGTATTC	62	False	NA	NA	False	AATAAA	-18	NA	56314793	56280601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56280701_56313282_56313385_56314680
transcript_74380.known	chr19	+	555	6	FSM	ENSG00000240225.10	ENST00000462524.5	555	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	59.4286126373484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGAAATCTATACTGC	-11	True	NA	NA	False	GATAAA	-24	NA	56368120	56376971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368221_56368865_56368937_56369278_56369338_56373156_56373284_56373530_56373624_56376866
transcript_74381.known	chr19	+	945	6	FSM	ENSG00000240225.10	ENST00000589844.5	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	62.4839179309364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAAAGCCGTATGAATG	7	True	NA	NA	False	NA	NA	NA	56368138	56377366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368221_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_74383.known	chr19	+	980	6	FSM	ENSG00000240225.10	ENST00000468396.5	980	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	59.8150482738249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACAAATGTAAGGAATGC	-33	True	NA	NA	False	NA	NA	NA	56368172	56377208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368461_56368865_56368937_56369278_56369338_56373156_56373284_56373530_56373624_56376866
transcript_74384.known	chr19	+	1989	6	FSM	ENSG00000240225.10	ENST00000488113.5	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	52.5714751552589	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCTTCGGGTGCATT	-11	True	NA	7	True	ATTAAA	-14	NA	56368318	56378350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_74386.nnic	chr19	+	1008	6	NNC	ENSG00000240225.10	novel	3440	6	NA	NA	16	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	61.9083193117048	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACTCTAGCTTATTTG	23	True	NA	12	True	AATAAA	-19	NA	56368154	56379550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866_56377119_56379391
transcript_7439.known	chr1	+	10124	3	FSM	ENSG00000117505.13	ENST00000370272.9	10124	3	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_2	10	677	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTTACATATGTCTTT	-30	True	NA	NA	False	TATAAA	-15	NA	93345906	93369493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93346866_93353907_93354072_93360492
transcript_74390.nic	chr19	+	1894	5	NIC	ENSG00000240225.10	novel	945	6	NA	NA	-2	-5	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	61.936963923008	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGAGGTTTTTCTTCGGGT	NA	False	NA	2	True	ATTAAA	-9	NA	56368096	56378345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_56368221_56368865_56368937_56373156_56373284_56373530_56373624_56376866
transcript_74391.known	chr19	+	1076	5	FSM	ENSG00000240225.10	ENST00000587341.5	1076	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.7166902738389	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCACAGAACTCACTGAA	60	False	NA	NA	False	NA	NA	NA	56368389	56374272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368467_56368865_56368937_56369278_56369338_56373156_56373284_56373530
transcript_74392.known	chr19	+	3393	5	FSM	ENSG00000240225.10	ENST00000495307.5	3393	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_4	23.2849200127464	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	-9	True	NA	25	True	AATAGA	-20	NA	56368320	56379828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866
transcript_74395.known	chr19	-	733	5	FSM	ENSG00000018869.18	ENST00000587778.5	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	12.5099960031968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACTCCTTATTAAT	264	False	NA	0	True	AATAAA	-20	NA	56393328	56384872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_74396.known	chr19	-	712	5	FSM	ENSG00000018869.18	ENST00000593145.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	16.5378354085412	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTGGCAAAAGGAACTC	-8	True	NA	-9	True	AATAAA	-11	NA	56393538	56384881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_74397.nic	chr19	-	956	5	NIC	ENSG00000018869.18	novel	625	5	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	19.0065778087482	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGATTCAAGCTCATT	5	True	NA	-4	True	AATAAA	-15	NA	56393587	56375845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_56376122_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_74398.known	chr19	-	625	5	FSM	ENSG00000018869.18	ENST00000589143.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	20.9582919151347	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGATTCAAGCTCATT	114	False	NA	-4	True	AATAAA	-15	NA	56393478	56375845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56376122_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_74401.known	chr19	+	550	4	FSM	ENSG00000240225.10	ENST00000596094.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTTTGAGTTCCTAAA	6	True	NA	NA	False	NA	NA	NA	56368335	56373757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530
transcript_74406.nnic	chr19	+	1055	5	NNC	ENSG00000267454.6	novel	1274	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	19.3697573552174	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	-47	True	NA	3	True	AATAAA	-14	NA	56393656	56399168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_56394054_56394216_56394385_56397880_56397989_56398276_56398384_56398893
transcript_74408.nnic	chr19	+	1112	5	NNC	ENSG00000267454.6	novel	1274	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	16.8281757775464	109	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	-47	True	NA	3	True	AATAAA	-14	NA	56393656	56399168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_56394054_56394216_56394442_56397880_56397989_56398276_56398384_56398893
transcript_74409.nic	chr19	+	1172	5	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_3	12.9494208364699	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	-47	True	NA	3	True	AATAAA	-14	NA	56393656	56399168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_56394054_56394216_56394442_56397880_56398049_56398276_56398384_56398893
transcript_74414.known	chr19	+	582	5	FSM	ENSG00000198440.9	ENST00000391778.3	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.4372685153431	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTAGTCAATTAATCATC	17	True	NA	NA	False	NA	NA	NA	56404348	56423070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56404430_56407025_56407124_56413958_56414086_56414344_56414441_56422890
transcript_74415.known	chr19	+	4916	5	FSM	ENSG00000198440.9	ENST00000333201.13	4916	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.96074487943871	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCAGACACGTGT	0	True	NA	NA	False	AATATA	-18	NA	56404331	56427364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56404453_56407025_56407124_56413958_56414086_56414344_56414441_56422890
transcript_74421.nic	chr19	+	1400	4	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	29	junction_1	11.2644968324772	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	-47	True	NA	3	True	AATAAA	-14	NA	56393656	56399168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_56394054_56394216_56394442_56397880_56398384_56398893
transcript_74425.known	chr19	+	656	3	FSM	ENSG00000198440.9	ENST00000539211.6	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCCTGGATGGTGAAGA	-2	True	NA	NA	False	NA	NA	NA	56404329	56414393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56404453_56407025_56407124_56413958
transcript_74426.known	chr19	+	1274	4	FSM	ENSG00000267454.6	ENST00000589888.5	1274	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	13.1233464566864	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	14	True	NA	3	True	AATAAA	-14	NA	56393717	56399168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56394442_56397880_56398049_56398276_56398384_56398893
transcript_74427.known	chr19	+	1606	4	FSM	ENSG00000267454.6	ENST00000587979.1	1606	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	10.9645894689324	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	29	True	NA	3	True	AATAAA	-14	NA	56393732	56399168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56394054_56394216_56394442_56397880_56398049_56398276
transcript_74428.known	chr19	-	4401	7	FSM	ENSG00000198046.13	ENST00000504904.8	4401	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	23.9165214862028	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACACAGTTGGGCTCTT	-11	True	NA	-8	True	AATAAA	-26	NA	56477345	56439328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56442742_56458154_56458248_56460688_56460816_56462337_56462430_56471698_56472188_56474011_56474125_56477271
transcript_7443.known	chr1	-	2376	3	FSM	ENSG00000223745.8	ENST00000445076.2	2376	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGGATCACGAGGTCAG	-2	True	NA	NA	False	NA	NA	NA	93345819	93337174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93339275_93339356_93339537_93345723
transcript_74430.known	chr19	-	3832	5	FSM	ENSG00000198046.13	ENST00000292069.10	3832	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	8.97217922246318	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGTTGGGCTCTTCTGT	151	False	NA	-4	True	AATAAA	-30	NA	56477374	56439324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56442742_56458154_56458248_56460688_56460816_56462337_56462430_56477271
transcript_74435.known	chr19	+	908	3	FSM	ENSG00000166770.12	ENST00000654200.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTCTTCCTTATTCT	NA	False	NA	25	True	AATAAA	-21	NA	56477589	56495439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56477926_56494162_56494343_56495047
transcript_74436.nic	chr19	+	722	3	FSM	ENSG00000166770.12	ENST00000693493.1	707	3	-15	0	2	0	multi-exon	FALSE	canonical	3	14	junction_1	12.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	-15	True	NA	23	True	AATAAA	-19	NA	56478141	56495437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478294_56494162_56494343_56495047
transcript_74438.known	chr19	+	705	3	FSM	ENSG00000166770.12	ENST00000592146.4	730	3	24	1	-3	1	multi-exon	FALSE	canonical	3	10	junction_1	14.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTTCCTTATTCTTT	-11	True	NA	27	True	AATAAA	-23	NA	56478145	56495441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478277_56494162_56494343_56495047
transcript_7444.known	chr1	-	1296	5	FSM	ENSG00000117500.13	ENST00000479918.5	1296	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	147.287771047022	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATGATGGATTGAATAAA	782	False	NA	-40	True	TATAAA	-16	NA	93180361	93154231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93154889_93156035_93156085_93156299_93156484_93160128_93160227_93180053
transcript_74440.known	chr19	+	1601	2	FSM	ENSG00000166770.12	ENST00000586822.3	1619	2	0	18	0	-1	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTCTACTGACAAACT	NA	False	NA	5	True	AATAAA	-1	NA	56477581	56495419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56477926_56494162
transcript_74441.known	chr19	+	495	2	FSM	ENSG00000166770.12	ENST00000601875.2	1412	2	83	834	10	284	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAAGTACATTCACAT	83	False	NA	NA	False	AATGAA	-34	NA	56478239	56494603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478294_56494162
transcript_74443.nic	chr19	+	1430	2	FSM	ENSG00000166770.12	ENST00000691191.1	1435	2	0	5	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	-35	True	NA	23	True	AATAAA	-19	NA	56478121	56495437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478277_56494162
transcript_74444.known	chr19	+	818	3	FSM	ENSG00000166770.12	ENST00000685306.1	1083	3	260	5	3	0	multi-exon	FALSE	canonical	3	39	junction_2	35.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	-23	True	NA	23	True	AATAAA	-19	NA	56478133	56495437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478382_56494162_56494343_56495047
transcript_74445.known	chr19	+	1475	2	FSM	ENSG00000166770.12	ENST00000669162.2	1499	2	24	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTCTTCCTTATTCTT	24	True	NA	26	True	AATAAA	-22	NA	56478180	56495440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478378_56494162
transcript_74446.known	chr19	+	6266	5	FSM	ENSG00000196263.8	ENST00000308031.10	6266	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.59807621135332	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTCATAGTATCTTATT	-9	True	NA	NA	False	TATAAA	-11	NA	56507854	56530212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56507921_56511516_56511605_56516274_56516402_56518481_56518578_56524323
transcript_74447.known	chr19	-	413	3	FSM	ENSG00000267421.6	ENST00000590613.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTGACAATACCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	56538575	56536157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56536333_56537650_56537738_56538424
transcript_74449.known	chr19	+	452	3	FSM	ENSG00000196867.8	ENST00000594386.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	24.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGAATTGCGTCTGAAG	106	False	NA	NA	False	ATTAAA	-18	NA	56539068	56544737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56539227_56539624_56539717_56544535
transcript_7445.known	chr1	+	496	4	FSM	ENSG00000122483.18	ENST00000448243.6	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	8.2192186706253	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATAAACTTAGGCAACA	4	True	NA	NA	False	ATTAAA	-16	NA	93180715	93186398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344
transcript_74451.known	chr19	-	2045	2	FSM	ENSG00000269696.3	ENST00000596587.2	2075	2	30	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCCCTCACCATGCTG	8	True	NA	NA	False	AATAAA	-24	NA	56567411	56545565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56547272_56567072
transcript_74457.known	chr19	+	7194	6	FSM	ENSG00000197016.12	ENST00000330619.13	7194	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	8.50881895447306	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTATATTGT	-3	True	NA	11	True	AATAAA	-19	NA	56567467	56582894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56568039_56568757_56568884_56570279_56570372_56574393_56574521_56574637_56574734_56576712
transcript_74459.known	chr19	+	1640	6	FSM	ENSG00000197016.12	ENST00000601902.5	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	16.2603812993423	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGGTATTTCTTTACA	23	False	NA	NA	False	ATTAAA	-18	NA	56567525	56588911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56568039_56568757_56568884_56570279_56570372_56574393_56574521_56574637_56574734_56588225
transcript_74461.known	chr19	+	3558	4	FSM	ENSG00000197951.10	ENST00000599599.7	3558	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	50.4997249717483	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATGGAGTGTTAAAACA	3	True	NA	NA	False	AATAAA	-22	NA	56595301	56624486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56595429_56601506_56601592_56613811_56613939_56621267
transcript_74463.known	chr19	+	758	3	FSM	ENSG00000197951.10	ENST00000594944.1	758	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	59.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTTTTTACTTCTTC	36	False	NA	NA	False	NA	NA	NA	56595334	56610543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56595429_56601506_56601592_56609964
transcript_74466.known	chr19	+	5428	3	FSM	ENSG00000197951.10	ENST00000328070.10	5428	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	10.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTCAGTCAAGGTGGC	1	True	NA	NA	False	NA	NA	NA	56595299	56626481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56595429_56601506_56601592_56621267
transcript_74467.known	chr19	+	978	7	FSM	ENSG00000105146.14	ENST00000415300.6	978	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.41602560309064	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTCTGCCTCTGTTCC	5	False	NA	NA	False	NA	NA	NA	57231008	57235417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57231115_57231741_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_74468.known	chr19	+	1287	7	FSM	ENSG00000105146.14	ENST00000302804.12	1287	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.81894409826699	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCATAGTTGTGTGAG	0	True	NA	9	True	AATAAA	-21	NA	57231022	57235548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57231307_57231741_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_74469.known	chr19	+	877	6	FSM	ENSG00000105146.14	ENST00000596375.1	877	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.23832034148352	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCTTCCTGAGCCCTG	657	False	NA	NA	False	NA	NA	NA	57231727	57235403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57231788_57232032_57232225_57232541_57232686_57233459_57233609_57234883_57235059_57235246
transcript_7447.known	chr1	+	3889	15	FSM	ENSG00000137942.18	ENST00000370253.6	3889	15	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_14	66.96877127834	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTAGTGTGTGATCTT	120	False	NA	20	True	AATAAA	-24	NA	93448281	93554661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946_93551106_93552408
transcript_74472.known	chr19	-	712	4	FSM	ENSG00000267871.6	ENST00000601567.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAATAAACTATAACCAT	NA	False	NA	-29	True	NA	NA	NA	57280308	57267219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57267713_57276934_57277057_57278115_57278183_57280278
transcript_74473.known	chr19	+	3850	3	FSM	ENSG00000197714.9	ENST00000360338.4	3850	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATAGATATATTTGTTTT	12	True	NA	NA	False	AATAAA	-26	NA	57280484	57294069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57280837_57284550_57284678_57290698
transcript_74474.known	chr19	-	515	3	FSM	ENSG00000267871.6	ENST00000597601.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGAACATCTTGTCACA	NA	False	NA	NA	False	AATGAA	-35	NA	57280334	57267375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57267713_57276934_57277057_57280278
transcript_74475.known	chr19	-	504	2	FSM	ENSG00000267871.6	ENST00000669944.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGGTGATCCTGGTCT	NA	False	NA	-60	True	NA	NA	NA	57280320	57267250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57267713_57280278
transcript_74476.known	chr19	+	4258	1	FSM	ENSG00000268205.1	ENST00000593427.1	4258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTGCCATGAACTGG	4030	False	NA	NA	False	AATAAA	-25	NA	57304304	57308562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57304300_57308600
transcript_74481.known	chr19	+	3690	4	FSM	ENSG00000178229.8	ENST00000321545.5	3690	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	9.46337971105226	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCAAAGCCTTTTTTAT	-20	True	NA	21	True	ATTAAA	-43	NA	57320471	57330770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57320872_57323681_57323809_57326632_57326729_57327703
transcript_74482.known	chr19	+	4423	3	FSM	ENSG00000131845.15	ENST00000282286.6	4423	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	1	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCTGAATGATATTCC	-16	True	NA	22	True	AATAAA	-23	NA	57351270	57359898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57351698_57353724_57353852_57356029
transcript_74484.known	chr19	-	1045	2	FSM	ENSG00000268678.1	ENST00000597973.1	1045	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTTTGTGGGCCTTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	57352012	57350847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57351360_57351479
transcript_74486.known	chr19	+	2754	4	FSM	ENSG00000152433.15	ENST00000282282.4	2754	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTCTGTAGCCCTTGG	18	True	NA	NA	False	AAAACA	-22	NA	57363550	57379565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57363704_57368543_57368580_57371781_57371909_57377127
transcript_74489.known	chr19	+	4987	4	FSM	ENSG00000188785.12	ENST00000336128.12	4987	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	15.4128373622625	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCTGTGTTCTCTATCT	-23	True	NA	NA	False	ATTAAA	-15	NA	57389853	57402992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57390115_57394187_57394224_57397047_57397175_57398429
transcript_74492.known	chr19	+	2714	4	FSM	ENSG00000186272.13	ENST00000307658.12	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGGAAGTGTCCTGAG	-7	True	NA	32	True	AATAAA	-26	NA	57411160	57421934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57411407_57413595_57413637_57417911_57418039_57419634
transcript_74495.known	chr19	+	533	3	FSM	ENSG00000186272.13	ENST00000595206.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTGTTCACCTGGC	13	True	NA	NA	False	NA	NA	NA	57411180	57419900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57411407_57413595_57413637_57419634
transcript_745.known	chr1	-	1028	7	FSM	ENSG00000160087.21	ENST00000473215.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	203.981004017531	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGGGTTTGCAGCCTTT	-5	True	NA	NA	False	NA	NA	NA	1273849	1255267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267732_1267993_1273665
transcript_74507.known	chr19	-	1601	3	FSM	ENSG00000197128.13	ENST00000425074.3	1601	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGGTTCTTCCGAGTGC	-25	True	NA	NA	False	NA	NA	NA	57477566	57473149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57474422_57476633_57476673_57477276
transcript_74508.known	chr19	-	737	3	FSM	ENSG00000197128.13	ENST00000600175.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	23	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCAGTTAGGTCACA	-10	True	NA	NA	False	NA	NA	NA	57477551	57466662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57467086_57476633_57476673_57477276
transcript_74509.known	chr19	+	744	2	FSM	ENSG00000256060.3	ENST00000543226.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACATTCTGTCTCATGT	18	True	NA	57	True	AATGAA	-21	NA	57363550	57365405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57363704_57364814
transcript_74512.known	chr19	+	433	2	FSM	ENSG00000186272.13	ENST00000599867.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCTTTACCTGCACCAA	-5	True	NA	NA	False	NA	NA	NA	57411162	57419823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57411407_57419634
transcript_74513.known	chr19	+	568	2	FSM	ENSG00000186230.7	ENST00000415248.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACGCAGGGTGGCAAGGA	7	True	NA	NA	False	NA	NA	NA	57435342	57443607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57435594_57443290
transcript_74514.known	chr19	+	459	2	FSM	ENSG00000186230.7	ENST00000600697.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTTCGTCTTAAGTT	33	False	NA	12	True	TTTAAA	-3	NA	57435419	57438456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57435524_57438101
transcript_74515.known	chr19	-	482	2	FSM	ENSG00000197128.13	ENST00000601768.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCACAGAAGAACACAAC	37	False	NA	NA	False	NA	NA	NA	57477504	57466831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57467086_57477276
transcript_74516.known	chr19	+	1743	1	FSM	ENSG00000256060.3	ENST00000596755.1	1743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	74	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACATTGTAAATTACT	34	True	NA	29	True	AATAAA	-32	NA	57363566	57365309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57363600_57365300
transcript_74517.known	chr19	+	677	2	FSM	ENSG00000186230.7	ENST00000597296.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	11	True	NA	13	True	TTTAAA	-4	NA	57435346	57438457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57435668_57438101
transcript_74518.known	chr19	+	4207	3	FSM	ENSG00000186230.7	ENST00000334181.5	4207	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTTACTTCATGAACTT	-11	True	NA	NA	False	AATAAA	-21	NA	57435324	57447101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57435594_57441884_57442012_57443290
transcript_74519.known	chr19	-	5130	2	FSM	ENSG00000197128.13	ENST00000427512.6	5130	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTGTTGACCACTTT	-29	True	NA	-4	True	AATAAA	-21	NA	57477570	57469585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57474422_57477276
transcript_7452.known	chr1	+	5341	14	FSM	ENSG00000137942.18	ENST00000260506.12	5341	14	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_9	42.3036361692006	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTAGTGTGTGATC	2	True	NA	18	True	AATAAA	-22	NA	93448130	93554659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946
transcript_74520.known	chr19	-	5292	4	FSM	ENSG00000197128.13	ENST00000356584.8	5292	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	19.5675468285856	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATGTGTTGACCACTTT	-25	True	NA	-4	True	AATAAA	-21	NA	57477566	57469585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57474422_57475659_57475787_57476633_57476673_57477276
transcript_74522.known	chr19	+	2323	5	FSM	ENSG00000105136.22	ENST00000424930.6	2323	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	18.7799760383234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTTCCCATACACC	1	True	NA	3	True	NA	NA	NA	57487721	57494648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492112_57492212_57492855
transcript_74523.nnic	chr19	+	831	5	NNC	ENSG00000105136.22	novel	2323	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	23.3130864537495	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTTATGACCATTTCCA	-3	True	NA	19	True	AATAAA	-16	NA	57487717	57494664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_57487984_57490146_57490186_57491467_57491598_57492112_57492212_57494367
transcript_74524.known	chr19	+	3742	5	FSM	ENSG00000105136.22	ENST00000221735.12	3742	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	8.92678553567856	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTAGCTTTTTATTGCT	-12	True	NA	NA	False	AATAAA	-25	NA	57487749	57496098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57490146_57490186_57491470_57491598_57492112_57492212_57492855
transcript_74525.nnic	chr19	+	828	5	NNC	ENSG00000105136.22	novel	3742	5	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	19.9874960913067	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTTATGACCATTTCCA	-3	True	NA	19	True	AATAAA	-16	NA	57487717	57494664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_57487984_57490146_57490186_57491470_57491598_57492112_57492212_57494367
transcript_74526.known	chr19	+	3654	4	FSM	ENSG00000105136.22	ENST00000347466.10	3654	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	21.4527905462721	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTAGCTTTTTATTGC	-21	True	NA	NA	False	AATAAA	-24	NA	57487740	57496097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57490146_57490186_57491467_57491598_57492855
transcript_74527.known	chr19	+	690	4	FSM	ENSG00000105136.22	ENST00000521137.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	20.9496751499609	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGGAAAGCCTTTGGT	19	True	NA	NA	False	AAAAAG	-18	NA	57487780	57493176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57490146_57490186_57491470_57491598_57492855
transcript_74529.known	chr19	+	2319	4	FSM	ENSG00000105136.22	ENST00000426954.6	2319	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	26.2466929133727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCATTTCCAGAGACTGA	NA	False	NA	27	True	AATAAA	-24	NA	57487710	57494672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57491467_57491598_57492112_57492212_57492855
transcript_7453.nic	chr1	+	1329	10	ISM	ENSG00000137942.18	ENST00000260506.12	5341	14	-78	10443	-65	-5098	5prime_fragment	FALSE	canonical	3	521	junction_9	42.3576774564679	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTCCTTTAAGTTTT	-6	True	NA	41	True	NA	NA	NA	93448052	93544216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106
transcript_74531.known	chr19	+	1857	4	FSM	ENSG00000105136.22	ENST00000442920.6	1857	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	22.9927524813074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTGGACAATGTAGT	-3	True	NA	NA	False	NA	NA	NA	57487717	57494220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57491470_57491598_57492112_57492212_57492855
transcript_74533.known	chr19	+	2277	4	FSM	ENSG00000152439.13	ENST00000282292.9	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	21.6384431561566	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACTGGAGGCAGGAT	18	True	NA	NA	False	NA	NA	NA	57499937	57508229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57500114_57504656_57504787_57505301_57505401_57506357
transcript_74535.known	chr19	+	561	3	FSM	ENSG00000105136.22	ENST00000521754.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCTGATCAGCTCAGG	-9	True	NA	NA	False	NA	NA	NA	57487752	57493055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57491467_57491598_57492855
transcript_74538.known	chr19	+	2186	3	FSM	ENSG00000105136.22	ENST00000415379.6	2186	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAGACTGAATTGTGTT	-12	True	NA	35	True	AATAAA	-32	NA	57487749	57494680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57491470_57491598_57492855
transcript_74539.known	chr19	+	2019	4	FSM	ENSG00000152439.13	ENST00000598770.5	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	16.5126214353344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	15	True	NA	NA	False	NA	NA	NA	57499934	57507971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57500114_57504659_57504787_57505301_57505401_57506357
transcript_74542.known	chr19	-	4305	6	FSM	ENSG00000251369.9	ENST00000447310.5	4305	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	23.7907545067406	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTGACTTGTTAGG	-12	True	NA	-4	True	ATTAAA	-17	NA	57559863	57541839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57543244_57543650_57544584_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_74545.known	chr19	-	3376	5	FSM	ENSG00000251369.9	ENST00000457177.5	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	14.5086181285469	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTGTTAGGATTT	-12	True	NA	0	True	ATTAAA	-21	NA	57559863	57541835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57543244_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_74548.known	chr19	+	4090	4	FSM	ENSG00000121406.9	ENST00000376233.8	4090	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	4.71404520791032	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCTAATTTGTCTGTT	14	True	NA	3	True	AATGAA	-17	NA	57527355	57540876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57537203
transcript_74549.known	chr19	+	5505	4	FSM	ENSG00000121406.9	ENST00000602149.1	5505	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	31.8468557666565	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGCTGGTGTGGGTC	84	False	NA	NA	False	AATAAA	-18	NA	57527425	57557542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57552384
transcript_74555.known	chr19	+	4291	4	FSM	ENSG00000171649.12	ENST00000597850.2	4291	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	62.8985073131487	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	-6	True	NA	18	True	AATAAA	-18	NA	57584144	57593890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57584390_57584951_57584991_57588538_57588666_57590010
transcript_74557.nic	chr19	+	2459	4	NIC	ENSG00000171649.12	novel	4291	4	NA	NA	0	-560	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	64.3238334954903	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTAGTCTTGGGGTTCTG	-11	True	NA	8	True	AATAAA	-20	NA	57584139	57591830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57584613_57584951_57584991_57588538_57588666_57590010
transcript_74559.known	chr19	+	4144	3	FSM	ENSG00000171649.12	ENST00000536878.6	4144	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTGCCACCTGTATAT	-11	True	NA	-95	True	NA	NA	NA	57584139	57593777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57584390_57588538_57588666_57590010
transcript_74560.known	chr19	+	2860	3	FSM	ENSG00000171649.12	ENST00000599456.1	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	74	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	109	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57584613_57588538_57588666_57590010
transcript_74561.known	chr19	+	534	3	FSM	ENSG00000171649.12	ENST00000598689.1	534	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAGCATCACAGTGCA	-6	True	NA	NA	False	NA	NA	NA	57584144	57590214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57584390_57588580_57588666_57590010
transcript_74566.known	chr19	+	634	4	FSM	ENSG00000183647.11	ENST00000597864.1	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.53197264742181	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	4	True	NA	5	True	AATAAA	-29	NA	57599902	57612722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57612502
transcript_74567.nic	chr19	+	601	3	NIC	ENSG00000183647.11	novel	2742	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	6.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	-15	True	NA	5	True	AATAAA	-29	NA	57599883	57612722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57600135_57604276_57604407_57612502
transcript_74568.nnic	chr19	+	470	2	NIC	ENSG00000183647.11	novel	2742	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	-14	True	NA	5	True	AATAAA	-29	NA	57599884	57612722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57600135_57612502
transcript_74569.known	chr19	+	4924	3	FSM	ENSG00000213762.12	ENST00000396161.10	4924	3	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_1	3.5	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTCGTCACTGAATT	0	True	NA	16	True	AATAAA	-21	NA	57614241	57624724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57614504_57619411_57619509_57620159
transcript_74570.known	chr19	+	559	2	FSM	ENSG00000213762.12	ENST00000597975.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGGCCTCAATTGTG	-9	True	NA	NA	False	NA	NA	NA	57614232	57620447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57614504_57620159
transcript_74573.nic	chr19	+	2619	5	NIC	ENSG00000121417.14	novel	2759	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	30.9313756564431	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATCTTGGCATTTGA	-19	True	NA	18	True	AATAAA	-19	NA	57633167	57642767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57633437_57633785_57633906_57634022_57634062_57634628_57634756_57640703
transcript_74577.known	chr19	+	3773	4	FSM	ENSG00000121417.14	ENST00000240731.5	3773	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	28.2881993457028	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	-19	True	NA	4	True	AATAAA	-16	NA	57633167	57644041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57640703
transcript_74579.known	chr19	+	2472	3	FSM	ENSG00000121417.14	ENST00000347302.7	2472	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	-19	True	NA	30	True	AATAAA	-31	NA	57633167	57642779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57633437_57634628_57634756_57640703
transcript_74582.nnic	chr19	-	1524	6	NNC	ENSG00000179909.16	novel	2567	5	NA	NA	-32	47	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	13.8072444752746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGATGAAATCGGTGATT	NA	False	NA	45	True	NA	NA	NA	57709236	57697319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_57697842_57700987_57701146_57701237_57701387_57702518_57702789_57704852_57704980_57708938
transcript_74583.nnic	chr19	-	1275	6	NNC	ENSG00000179909.16	novel	2567	5	NA	NA	-32	-202	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	13.8072444752746	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTATCGCTTCTGTTTT	NA	False	NA	-6	True	AATATA	-15	NA	57709236	57697568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_57697842_57700987_57701146_57701237_57701387_57702518_57702789_57704852_57704980_57708938
transcript_74584.known	chr19	-	2567	5	FSM	ENSG00000179909.16	ENST00000451275.1	2567	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	11.5108644332213	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-12	True	NA	-2	True	NA	NA	NA	57709194	57697366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57697842_57700987_57701146_57701237_57702789_57704852_57704980_57708938
transcript_74587.nnic	chr19	+	1777	4	NNC	ENSG00000152443.13	novel	5262	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	28.5929284186765	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATGCAATTCTTCATA	-9	True	NA	23	True	AATAAA	-18	NA	57746807	57758148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_57747092_57750784_57750912_57753290_57753380_57756871
transcript_74588.known	chr19	-	5687	4	FSM	ENSG00000179909.16	ENST00000512439.6	5687	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10.6144555520604	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	14	True	NA	-2	True	NA	NA	NA	57709168	57697366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57701146_57701237_57702789_57704852_57704980_57708938
transcript_74589.known	chr19	-	2903	4	FSM	ENSG00000083814.13	ENST00000600125.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.7951304200522	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-2	True	NA	-2	True	AATAAA	-22	NA	57727613	57719750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57726907
transcript_74590.known	chr19	-	2431	4	FSM	ENSG00000083814.13	ENST00000317398.10	2431	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	2.35702260395516	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-13	True	NA	-2	True	AATAAA	-22	NA	57727624	57719750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57727390
transcript_74591.known	chr19	+	4560	3	FSM	ENSG00000204519.11	ENST00000282296.10	4560	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	12	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTCTTTATATGGATA	-18	True	NA	20	True	AATAAA	-20	NA	57681976	57690648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57682245_57685261_57685386_57686480
transcript_74592.known	chr19	+	469	3	FSM	ENSG00000204519.11	ENST00000596085.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	45.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCATCAGCAGTCAAAC	3	True	NA	NA	False	NA	NA	NA	57682034	57717301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57682245_57685261_57685386_57717166
transcript_74593.known	chr19	+	5262	3	FSM	ENSG00000152443.13	ENST00000317178.10	5262	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATGCAATTCTTCATA	-2	True	NA	23	True	AATAAA	-18	NA	57746814	57758148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57747092_57750784_57750912_57753290
transcript_74594.nic	chr19	+	1682	3	NIC	ENSG00000152443.13	novel	5262	3	NA	NA	-7	-6	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	29	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACATTTGAATGCAATTC	-9	True	NA	17	True	AATAAA	-12	NA	57746807	57758142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57747092_57750784_57750912_57756871
transcript_74595.known	chr19	-	6907	3	FSM	ENSG00000179909.16	ENST00000684351.1	6907	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	11	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATGGAATTTTTGGAA	-22	True	NA	NA	False	GGGGCT	-31	NA	57709204	57696274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57702789_57704852_57704980_57708938
transcript_74598.known	chr19	+	421	2	FSM	ENSG00000269026.2	ENST00000599221.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGCCCCCGGCTCAGG	13	False	NA	NA	False	NA	NA	NA	57682044	57747072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57682245_57746851
transcript_7460.nnic	chr1	+	531	4	Antisense	novelGene_ENSG00000137936.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCCATTTTAAAGGCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	93830695	93845370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_93830890_93841402_93841476_93842169_93842299_93845235
transcript_74632.known	chr19	+	1670	4	FSM	ENSG00000269343.9	ENST00000594328.1	1670	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	18.2086670449969	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACACCAGAGAATTCACA	11	False	NA	NA	False	NA	NA	NA	57819740	57842119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57819946_57820493_57820550_57839022_57839150_57840837
transcript_74634.known	chr19	+	769	4	FSM	ENSG00000268750.7	ENST00000596498.2	769	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	22.4251842554055	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTTCTGCCCAGTTCA	-4	True	NA	NA	False	NA	NA	NA	57819725	57858941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57819946_57820493_57820550_57856106_57856234_57858575
transcript_74649.known	chr19	-	648	4	FSM	ENSG00000204514.11	ENST00000597342.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	54.571054598569	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGACGGCTCTGCGTG	65	False	NA	-7	True	AATAAA	-17	NA	57888958	57850319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57850562_57876915_57877043_57885882_57885970_57888766
transcript_74663.known	chr19	+	2196	3	FSM	ENSG00000083828.16	ENST00000396154.7	2196	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTCTCATACTTTAC	-1	True	NA	47	True	NA	NA	NA	57769675	57780616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57769879_57776542_57776670_57778750
transcript_74667.nnic	chr19	+	646	3	Fusion	ENSG00000269343.9_ENSG00000198466.12	novel	1670	4	NA	NA	-41	-9	multi-exon	FALSE	canonical	3	12	junction_2	22.5	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGTGCCTGGGGAG	NA	False	NA	14	True	CATAAA	-14	NA	57819679	57854099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_57819946_57820493_57820550_57853775
transcript_74668.known	chr19	+	580	3	FSM	ENSG00000268750.7	ENST00000603271.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	28.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCATCAGCACCAGAAGC	1	True	NA	NA	False	NA	NA	NA	57819730	57858813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57819946_57856106_57856234_57858575
transcript_74669.known	chr19	+	5794	3	FSM	ENSG00000269343.9	ENST00000594901.2	5794	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	12	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-9	True	NA	17	True	AATAAA	-17	NA	57830298	57846238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57830565_57839022_57839150_57840837
transcript_7467.known	chr1	-	5896	7	FSM	ENSG00000067334.14	ENST00000436063.7	5896	7	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_5	53.8052042092584	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTCACATAGTTT	-1	True	NA	NA	False	ATTAAA	-17	NA	93879206	93866283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93875644_93875784_93876267_93877863_93879076
transcript_74673.known	chr19	+	1974	3	FSM	ENSG00000198466.12	ENST00000423137.1	1974	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	28	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCTTATGAGTGCTG	17	True	NA	NA	False	NA	NA	NA	57849859	57860210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57850072_57856106_57856234_57858575
transcript_74675.known	chr19	+	6885	3	FSM	ENSG00000198466.12	ENST00000339656.8	6885	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	26	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATACCTCTTTCCTGT	16	True	NA	27	True	ATTAAA	-28	NA	57849858	57865117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57850072_57856103_57856234_57858575
transcript_74679.known	chr19	-	1703	3	FSM	ENSG00000178935.5	ENST00000596248.1	1703	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	22	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTCCTTACAAGTAAAAT	-2	True	NA	NA	False	NA	NA	NA	57814913	57807908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57809104_57813293_57813421_57814532
transcript_7468.known	chr1	-	2199	6	FSM	ENSG00000067334.14	ENST00000359208.6	2199	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	341.97508681189	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACGTTTGGAAAACTAACA	-1	True	NA	-21	True	NA	NA	NA	93879162	93869797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93876267_93877863_93879076
transcript_74680.known	chr19	-	2352	3	FSM	ENSG00000178935.5	ENST00000391701.1	2352	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-2	True	NA	-6	True	AATAAA	-17	NA	57814913	57807081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57809104_57813293_57813421_57814710
transcript_74693.known	chr19	+	1977	2	FSM	ENSG00000083828.16	ENST00000396150.4	1977	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGTGTTATAATAAAGG	19	True	NA	-25	True	NA	NA	NA	57769695	57780544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57769879_57778750
transcript_74695.known	chr19	+	545	2	FSM	ENSG00000198466.12	ENST00000484707.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGGGAGTTTCATTCA	17	True	NA	23	True	CATAAA	-23	NA	57849859	57854108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57850072_57853775
transcript_74697.nnic	chr19	-	631	2	NIC	ENSG00000204514.11	novel	528	3	NA	NA	-76	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	0	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	NA	False	NA	-2	True	AATAAA	-22	NA	57889150	57850314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57850562_57888766
transcript_74698.known	chr19	-	2104	2	FSM	ENSG00000204514.11	ENST00000597652.1	2104	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAATAAAGGCC	NA	False	NA	NA	False	AATATA	-20	NA	57857289	57848730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57850562_57857016
transcript_747.known	chr1	-	2260	7	FSM	ENSG00000160087.21	ENST00000349431.11	2260	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_5	57.3626378596925	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-10	True	NA	-6	True	AAAAAG	-28	NA	1273854	1253911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273665
transcript_74701.known	chr19	-	909	2	FSM	ENSG00000204514.11	ENST00000595295.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGGGGCTTCTT	202	False	NA	NA	False	NA	NA	NA	57888821	57858129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57858984_57888766
transcript_74706.known	chr19	+	3339	4	FSM	ENSG00000269343.9	ENST00000442832.8	3339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.8369562771605	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-13	True	NA	17	True	AATAAA	-17	NA	57830294	57846238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57830565_57839022_57839150_57840837_57841797_57844255
transcript_74707.known	chr19	-	528	3	FSM	ENSG00000204514.11	ENST00000596604.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	24	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	103	False	NA	-2	True	AATAAA	-22	NA	57888920	57850314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57850562_57876915_57877043_57888766
transcript_74708.known	chr19	-	757	5	FSM	ENSG00000204514.11	ENST00000597348.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.8235969708065	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTGTGTGTGGTCA	-14	True	NA	-6	True	AATAAA	-31	NA	57889037	57864757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57864924_57868457_57868580_57875155_57875227_57876915_57877043_57888766
transcript_74709.known	chr19	-	1975	3	FSM	ENSG00000173480.11	ENST00000595559.1	1975	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	24.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCTTATGAGTGCTG	8	True	NA	NA	False	ATTAAA	-22	NA	57916591	57908479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57910115_57912059_57912187_57916378
transcript_74725.known	chr19	-	597	6	FSM	ENSG00000196724.13	ENST00000600989.5	597	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	14.0513344562002	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTCTTGTGAATTACA	4807	False	NA	NA	False	NA	NA	NA	57935176	57922430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930555_57933816_57933903_57935160
transcript_74726.nic	chr19	-	1004	6	NIC	ENSG00000196724.13	novel	3547	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_2	13.7462722219517	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGGGACTCATGCCT	4568	False	NA	-11	True	AATAAA	-14	NA	57935415	57922265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930558_57933816_57933903_57935160
transcript_74727.nic	chr19	-	3262	5	NIC	ENSG00000196724.13	novel	3726	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	13.4443296597488	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACTCATGCCTTTAAT	4568	False	NA	-6	True	AATAAA	-19	NA	57935415	57922260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57922630_57925622_57928048_57930427_57930555_57933816_57933903_57935160
transcript_74736.known	chr19	-	2207	3	FSM	ENSG00000152454.4	ENST00000282308.4	2207	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTATATTTAGTAT	-9	True	NA	-18	True	AATAAA	-21	NA	57947706	57940832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57942648_57943933_57944061_57947441
transcript_74737.known	chr19	-	1958	2	FSM	ENSG00000152454.4	ENST00000598928.1	1958	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAGGTAACACACATAG	22	False	NA	-109	True	AAAACA	-23	NA	57947675	57940923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57942648_57947441
transcript_74738.known	chr19	-	4225	7	FSM	ENSG00000166704.13	ENST00000341164.9	4225	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	30.3150127824482	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	NA	False	NA	-21	True	AATAAA	-25	NA	58003349	57977075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002779
transcript_7474.known	chr1	-	499	2	FSM	ENSG00000067334.14	ENST00000528680.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCCTACAGAAAAAACTAC	-3	True	NA	NA	False	NA	NA	NA	93879164	93877472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93877884_93879076
transcript_74740.known	chr19	+	1919	4	FSM	ENSG00000176593.8	ENST00000313957.8	1919	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.02768199119819	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACGGGGGTGTCTTTT	-15	True	NA	NA	False	ATTAAA	-10	NA	58002871	58007206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58003047_58003210_58003337_58004382_58004701_58005906
transcript_74746.nnic	chr19	+	1729	4	NNC	ENSG00000176593.8	novel	1919	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.35412613473634	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACGGGGGTGTCTTTT	-21	True	NA	NA	False	ATTAAA	-10	NA	58002865	58007206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_58003047_58003210_58003337_58004578_58004701_58005906
transcript_74747.known	chr19	+	6438	3	FSM	ENSG00000176593.8	ENST00000550135.5	6438	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCCTAAGGACACGCAT	NA	False	NA	24	True	AATAAA	-24	NA	58002060	58011232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58003047_58003210_58003337_58005906
transcript_74748.known	chr19	-	636	3	FSM	ENSG00000166704.13	ENST00000546715.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	48	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGAGCAGTAAGGTGAT	-18	True	NA	NA	False	AAAAAG	-5	NA	58002817	58000223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58000740_58001288_58001371_58002779
transcript_74749.known	chr19	+	1096	2	FSM	ENSG00000176593.8	ENST00000546956.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGGGAGAGGAAAAGTT	15	True	NA	NA	False	NA	NA	NA	58002901	58004161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58003047_58003210
transcript_7475.nic	chr1	-	1627	2	ISM	ENSG00000067334.14	ENST00000359208.6	2199	6	-53	6577	-9	384	5prime_fragment	FALSE	canonical	3	829	junction_1	0	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAAGAGGATGAAAA	NA	False	NA	13	True	AAGAAA	-3	NA	93879215	93876374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_93877863_93879076
transcript_74751.known	chr19	+	813	3	FSM	ENSG00000152467.10	ENST00000601162.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCCATCTGTCCTGTGG	-3	True	NA	8	True	ATTAAA	-18	NA	58034105	58038442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58034162_58035969_58036012_58037727
transcript_74753.nic	chr19	+	442	2	ISM	ENSG00000152467.10	ENST00000601162.1	813	3	-18	2105	-18	-2105	5prime_fragment	FALSE	canonical	3	18	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGTGCCAATTTATATTC	-21	True	NA	NA	False	TATAAA	-23	NA	58034087	58036337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_58034162_58035969
transcript_74757.known	chr19	+	3334	5	FSM	ENSG00000176293.20	ENST00000313434.10	3334	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	13.6450540489952	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTGGCTGTTTTTGGT	19	True	NA	NA	False	NA	NA	NA	58059281	58069755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445_58063542_58066740
transcript_74759.nnic	chr19	+	495	5	NNC	ENSG00000176293.20	novel	3334	5	NA	NA	-6	4263	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	12.8452325786651	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCCTCAGGTATTCCTT	NA	False	NA	NA	False	AATAAA	-21	NA	58059232	58074018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445_58063542_58073891
transcript_7476.known	chr1	-	4883	7	FSM	ENSG00000023909.10	ENST00000370238.8	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	11.1455023315337	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAGCTATTTATGCAT	-16	True	NA	-10	True	AATAAA	-24	NA	93909430	93885198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93889160_93894613_93894729_93896617_93896821_93897838_93897899_93901584_93901670_93904522_93904589_93909037
transcript_74765.nnic	chr19	+	424	4	NNC	ENSG00000176293.20	novel	3346	4	NA	NA	-2	4263	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_3	15.1730755689881	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCCTCAGGTATTCCTT	NA	False	NA	NA	False	AATAAA	-21	NA	58059236	58074018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_58059311_58061579_58061707_58063445_58063542_58073891
transcript_74768.known	chr19	-	2004	3	FSM	ENSG00000121413.13	ENST00000600318.1	2004	3	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_2	89	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCATGAATCCAGTGG	25	True	NA	NA	False	TTTAAA	-26	NA	58098210	58087636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58088838_58089864_58090387_58097929
transcript_74769.known	chr19	-	761	3	FSM	ENSG00000121413.13	ENST00000600845.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	68	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCAGCTAGCCTG	32	False	NA	NA	False	NA	NA	NA	58098203	58088687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58088838_58089864_58090387_58098114
transcript_74770.nic	chr19	-	1837	3	ISM	ENSG00000121413.13	ENST00000594191.5	1042	4	-56	544	-56	0	5prime_fragment	FALSE	canonical	3	90	junction_2	51	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCATGAATCCAGTGG	NA	False	NA	NA	False	TTTAAA	-26	NA	58098287	58087636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_58088838_58089864_58090387_58098173
transcript_74777.nnic	chr19	-	561	4	NNC	ENSG00000181894.15	novel	3501	4	NA	NA	-12	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.816496580927726	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATCATATTTTTTTC	-8	True	NA	-5	True	AATAAA	-26	NA	58150801	58126327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_58126700_58142616_58142662_58143104_58143199_58150751
transcript_74781.known	chr19	+	2808	8	FSM	ENSG00000171606.18	ENST00000617501.5	2808	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	20.1170046863598	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTGTATTTCCTGCC	-26	True	NA	30	True	AATAAA	-22	NA	58183060	58213562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_74787.known	chr19	+	2678	7	FSM	ENSG00000171606.18	ENST00000345813.7	2678	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	40.708994365155	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTAGAACCTGTGTAT	0	True	NA	22	True	AATAAA	-14	NA	58183086	58213554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58183443_58183920_58183999_58185711_58185839_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_7479.known	chr1	-	486	1	FSM	ENSG00000286692.1	ENST00000659885.1	486	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCACAGTACATCACGTA	NA	False	NA	NA	False	AATAAA	-26	NA	94418228	94417742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94417700_94418200
transcript_74790.known	chr19	+	2156	2	FSM	ENSG00000171606.18	ENST00000594248.1	2156	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-11	True	NA	NA	False	NA	NA	NA	58183393	58186176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58184847_58185473
transcript_74802.known	chr19	+	3516	7	FSM	ENSG00000198131.15	ENST00000596825.5	3516	7	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	77.9602819104418	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	59	False	NA	NA	False	AATAAA	-18	NA	58228974	58263644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_7481.known	chr1	+	3604	23	FSM	ENSG00000117528.14	ENST00000370214.9	3604	23	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_12	14.3190475928723	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGTCTCTTTTTTAA	-11	True	NA	15	True	AATAAA	-18	NA	94418388	94518663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94480463_94480607_94483169_94483240_94487541_94487612_94487693_94487792_94487891_94487984_94489724_94489817_94489902_94489976_94491183_94491248_94498601_94498680_94498782_94498849_94498944_94499035_94499494_94499615_94506537_94506643_94515145_94515203_94517051
transcript_74812.known	chr19	-	2512	5	FSM	ENSG00000283103.4	ENST00000634676.2	2512	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	148.284355209847	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTATCTCTTTGTCTT	-26	True	NA	NA	False	NA	NA	NA	58326935	58310351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58312289_58312969_58313114_58314805_58315037_58325274_58325362_58326822
transcript_74815.known	chr19	+	9110	4	FSM	ENSG00000278129.2	ENST00000621650.2	9110	4	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	3.77123616632825	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTGTGCAGACTGT	-16	True	NA	6	True	AATAAA	-14	NA	58278954	58302791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097
transcript_74820.known	chr19	-	3057	4	FSM	ENSG00000283103.4	ENST00000664481.1	3057	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	114.822568435923	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATTACCATTATAGTTT	-33	True	NA	NA	False	GATAAA	-41	NA	58326942	58309726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58312289_58312969_58313114_58314805_58315037_58326822
transcript_74827.known	chr19	-	614	4	FSM	ENSG00000283103.4	ENST00000666049.1	614	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	145.810379145885	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	578	False	NA	-25	True	AATAAA	-20	NA	58326967	58314787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58315037_58322361_58322495_58325274_58325362_58326822
transcript_74841.nic	chr19	-	811	3	ISM	ENSG00000283103.4	ENST00000651375.3	2818	5	-49	4356	-45	0	5prime_fragment	FALSE	canonical	3	292	junction_1	12.5	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	2	True	NA	-25	True	AATAAA	-20	NA	58327297	58314787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_58315037_58325274_58325362_58326822
transcript_74844.known	chr19	-	2708	2	FSM	ENSG00000268516.3	ENST00000597230.3	2726	2	18	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTTGTGTGTTTCGT	-10	True	NA	-5	True	AATACA	-23	NA	58278808	58257269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58259692_58278522
transcript_74847.nnic	chr19	-	439	2	FSM	ENSG00000268516.3	ENST00000693494.1	439	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTTGGAAAATGCT	-10	True	NA	0	True	AATATA	-24	NA	58278808	58274700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58274854_58278522
transcript_74848.known	chr19	-	683	2	FSM	ENSG00000283103.4	ENST00000669440.2	687	2	4	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	0	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGTTGGTGGTTCACC	-6	True	NA	-17	True	AATAAA	-28	NA	58327248	58314779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58315037_58326822
transcript_74849.known	chr19	+	218	3	FSM	ENSG00000198131.15	ENST00000599714.1	218	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	115.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTGGTGTGTTTTTTG	384	False	NA	NA	False	ATTAAA	-32	NA	58229470	58231820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58229571_58230393_58230463_58231771
transcript_74850.known	chr19	+	895	7	FSM	ENSG00000198131.15	ENST00000595981.5	895	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_6	91.0544708768694	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTGGTTTGAATGCAA	381	False	NA	48	True	AAAAAG	-8	NA	58229467	58277495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58276322_58276430_58277182
transcript_74851.known	chr19	+	1469	4	FSM	ENSG00000142396.10	ENST00000413518.5	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	30.1809358517739	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGATGTATATTTT	NA	False	NA	23	True	TATAAA	-32	NA	58305318	58315663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58305446_58306087_58306217_58312165_58312463_58314747
transcript_74852.known	chr19	+	922	4	FSM	ENSG00000142396.10	ENST00000427361.5	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	136.252217107343	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCTGTCTCAT	-10	True	NA	21	True	NA	NA	NA	58305373	58315202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58305446_58306087_58306217_58312196_58312463_58314747
transcript_74853.known	chr19	+	616	2	FSM	ENSG00000142396.10	ENST00000434052.5	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACAGGAGAGGGAGGAT	-7	True	NA	NA	False	NA	NA	NA	58305376	58306634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58305446_58306087
transcript_74854.known	chr19	+	4654	3	FSM	ENSG00000182318.6	ENST00000329665.5	4654	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0.5	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTAAAGACAAATTC	-3	True	NA	6	True	AATAAA	-20	NA	58326993	58342332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58327115_58334751_58335206_58338253
transcript_74858.known	chr19	+	712	4	FSM	ENSG00000268895.6	ENST00000600379.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.55777733351102	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCATTCTTTGCAGAA	27	False	NA	NA	False	NA	NA	NA	58347786	58354724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58347845_58353320_58353475_58353713_58353858_58354368
transcript_74860.known	chr19	+	977	3	FSM	ENSG00000268895.6	ENST00000593960.5	977	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGAGTTGAGGCGACTGC	-7	True	NA	NA	False	NA	NA	NA	58347752	58354502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58347845_58353378_58353475_58353713
transcript_74862.known	chr19	+	559	3	FSM	ENSG00000268895.6	ENST00000599728.5	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGCCTACCCGTGACAT	-7	True	NA	NA	False	NA	NA	NA	58347752	58354039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58347845_58353320_58353462_58353713
transcript_74863.known	chr19	+	1736	3	FSM	ENSG00000269054.3	ENST00000599889.3	1835	3	14	85	14	-58	multi-exon	FALSE	canonical	1	2	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTATGCCTGCAACCG	5485	False	NA	NA	False	NA	NA	NA	58362582	58367535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58362753_58364535_58364600_58366033
transcript_74864.known	chr19	+	1056	2	FSM	ENSG00000268895.6	ENST00000600686.1	1056	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTGGGGGAGAATGCAT	29	False	NA	NA	False	NA	NA	NA	58347788	58354713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58347845_58353713
transcript_74866.known	chr19	-	475	2	FSM	ENSG00000121410.12	ENST00000598345.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	1764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTCTTTGGACTCC	-35	True	NA	-21	True	AATAAA	-19	NA	58347657	58346859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58347030_58347352
transcript_74867.known	chr19	+	1762	3	FSM	ENSG00000269054.3	ENST00000663335.1	1762	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTAGGGGAAGCCTGTG	6	True	NA	NA	False	AATAAA	-4	NA	58362607	58367593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58362753_58364535_58364593_58366033
transcript_74876.known	chr19	+	1520	5	FSM	ENSG00000083845.9	ENST00000596046.1	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	7525	junction_4	423.263806626553	5432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	3	False	NA	33	True	AATAAA	-33	NA	58387288	58394806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_74877.known	chr19	+	741	6	FSM	ENSG00000083845.9	ENST00000196551.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	7525	junction_5	545.395782895321	50686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	-3	True	NA	31	True	AATAAA	-31	NA	58387268	58394804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58387340_58388136_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_74878.known	chr19	+	536	5	FSM	ENSG00000083845.9	ENST00000598098.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	3560.2247471192	5862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	-8	True	NA	31	True	AATAAA	-31	NA	58387263	58394804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58387340_58388136_58388246_58393358_58393488_58394496_58394596_58394681
transcript_74879.known	chr19	+	800	7	FSM	ENSG00000083845.9	ENST00000598495.5	800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3831.17359811441	4167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGTGCTGTTGTCTG	-3	True	NA	27	True	AATAAA	-27	NA	58387268	58394800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58387340_58388136_58388246_58388417_58388481_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_74880.known	chr19	+	2187	4	FSM	ENSG00000171574.18	ENST00000593920.5	2187	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.5181016954473	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGCCGCTTAAAATTT	26	True	NA	-2	True	AATAAA	-10	NA	58408687	58418310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58409166_58410005_58410092_58415523_58415647_58416810
transcript_74881.known	chr19	+	591	3	FSM	ENSG00000171574.18	ENST00000596921.5	591	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAACCCCCGAAAAATT	5340	False	NA	NA	False	NA	NA	NA	58401503	58417119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58401663_58415523_58415647_58416810
transcript_74882.nic	chr19	+	2111	3	NIC	ENSG00000171574.18	novel	2187	4	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	6.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGCCGCTTAAAATTT	16	True	NA	-2	True	AATAAA	-10	NA	58408677	58418310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_58409166_58415523_58415647_58416810
transcript_74885.known	chr19	+	2050	7	FSM	ENSG00000083838.17	ENST00000594369.6	2050	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	9.74679434480896	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	-2	True	NA	7	True	CATAAA	-17	NA	58476351	58481230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_74887.known	chr19	+	2154	6	FSM	ENSG00000083838.17	ENST00000391694.4	2154	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	10.3923048454133	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	21	False	NA	7	True	CATAAA	-17	NA	58476449	58481230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58480020_58480175
transcript_74888.known	chr19	+	1889	6	FSM	ENSG00000083838.17	ENST00000335841.8	1889	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	11.5169440391104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	-1	True	NA	7	True	CATAAA	-17	NA	58476427	58481230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479929_58480020_58480175
transcript_74889.known	chr19	+	5054	4	FSM	ENSG00000083812.13	ENST00000196482.4	5054	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	0.816496580927726	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAGGGAAACCTCCAC	9	True	NA	NA	False	AATAAA	-21	NA	58467079	58475436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58467184_58469179_58469307_58469727_58469845_58470730
transcript_7489.known	chr1	+	884	9	FSM	ENSG00000117528.14	ENST00000315713.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	36.0899483928697	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTACTTATTGTTT	6	False	NA	NA	False	AATAAA	-23	NA	94418478	94478723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94478523
transcript_74898.known	chr19	+	997	2	FSM	ENSG00000083838.17	ENST00000594468.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACCATGGACACCAAGA	9043	False	NA	NA	False	NA	NA	NA	58476145	58478124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58476197_58477178
transcript_74899.known	chr19	-	474	2	FSM	ENSG00000083807.10	ENST00000599700.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCTGTATGTCTGCGT	-4	True	NA	-9	True	AATAAA	-16	NA	58499241	58498336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58498692_58499122
transcript_74900.known	chr19	-	643	3	FSM	ENSG00000083807.10	ENST00000594786.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_2	1.5	2707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGTCTGCGTGGAT	-38	True	NA	-5	True	AATAAA	-20	NA	58499275	58498332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58498692_58498784_58498916_58499122
transcript_74901.nnic	chr19	+	1390	4	Antisense	novelGene_ENSG00000119574.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	5.18544972870135	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTATGGAGTTTTGGTA	-6	True	NA	24	True	AATAAA	-13	NA	58514171	58521599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_58514342_58514655_58514743_58516342_58516469_58520592
transcript_74905.nnic	chr19	+	556	3	Antisense	novelGene_ENSG00000119574.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTGGCAGTGGACTGA	-6	True	NA	NA	False	ATTAAA	-16	NA	58514171	58515343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_58514342_58514655_58514743_58515044
transcript_74911.known	chr19	+	3364	17	FSM	ENSG00000130726.12	ENST00000253024.10	3364	17	0	0	0	0	multi-exon	TRUE	canonical	3	2294	junction_7	288.405902928061	1085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	-10	True	NA	34	True	AATAAA	-14	NA	58544063	58550715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58545098_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_7492.known	chr1	-	2298	6	FSM	ENSG00000117525.14	ENST00000334047.12	2298	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	10.1666120217111	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACTGCACTTCTTCTC	-3	True	NA	45	True	AATACA	-15	NA	94541759	94529172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94530597_94532320_94532481_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_74922.known	chr19	-	894	6	FSM	ENSG00000130724.10	ENST00000312547.7	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	256.858716028871	4418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	2	True	NA	-16	True	AATAAA	-16	NA	58555105	58551565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554987
transcript_74923.known	chr19	-	885	6	FSM	ENSG00000130724.10	ENST00000601220.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	239.39540513552	3704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	18	True	NA	-16	True	AATAAA	-16	NA	58554973	58551565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
transcript_74924.known	chr19	-	1178	5	FSM	ENSG00000130724.10	ENST00000688139.1	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_1	34.4855042010408	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	8713	False	NA	-16	True	AATAAA	-16	NA	58554638	58551565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044
transcript_74925.known	chr19	-	766	4	ISM	ENSG00000130724.10	ENST00000600006.6	1014	5	999	0	541	0	3prime_fragment	FALSE	canonical	3	962	junction_3	35.3490531069158	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	9254	False	NA	-16	True	AATAAA	-16	NA	58554097	58551565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_58551968_58552054_58552186_58552258_58552439_58554044
transcript_74926.known	chr19	-	734	7	FSM	ENSG00000130725.8	ENST00000595957.5	734	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	799.589825403556	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGGGGTGGCTACATCG	-22	True	NA	NA	False	NA	NA	NA	58558954	58556140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558693
transcript_7493.known	chr1	-	1879	5	FSM	ENSG00000117525.14	ENST00000370207.4	1879	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	18.4594149419747	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTATTCTATCTTCCATT	4	True	NA	-20	True	AATAAA	-25	NA	94541637	94529309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94530597_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_74930.known	chr19	-	1159	6	FSM	ENSG00000130725.8	ENST00000253023.8	1159	6	0	0	0	0	multi-exon	FALSE	canonical	3	1931	junction_5	132.591704114549	3026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTTCTTACTTC	-18	True	NA	-6	True	ATTAAA	-17	NA	58558611	58555711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272
transcript_74935.known	chr19	+	1308	4	FSM	ENSG00000286104.1	ENST00000487264.5	1308	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.62466929133727	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAATAGAGCACTTTTA	-10	True	NA	NA	False	TATAAA	-23	NA	58575444	58599801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58575589_58586154_58586357_58591497_58591625_58598966
transcript_74943.known	chr19	+	944	3	FSM	ENSG00000286104.1	ENST00000473164.1	944	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATTTGACTAGAACTCAA	1	True	NA	NA	False	NA	NA	NA	58575455	58599575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58575589_58586154_58586357_58598966
transcript_74951.known	chr19	+	1120	1	FSM	ENSG00000267858.7	ENST00000661912.1	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTTCCAGGTGAAAT	0	True	NA	NA	False	NA	NA	NA	58559159	58560279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58559200_58560300
transcript_74952.known	chr19	+	469	1	FSM	ENSG00000213753.11	ENST00000464061.1	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGGCTAAC	NA	False	NA	NA	False	NA	NA	NA	58598966	58599435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58599000_58599400
transcript_74953.known	chr19	+	3282	2	FSM	ENSG00000213753.11	ENST00000493504.1	3282	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTACTCTTTGTTGTGTT	5	True	NA	12	True	AATAAA	-23	NA	58575459	58584397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58575589_58581244
transcript_74955.known	chr2	-	3880	2	FSM	ENSG00000184731.6	ENST00000327669.5	3880	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATTTATGAGTTTGAG	-6	True	NA	-5	True	AATAAA	-21	NA	46505	38813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_41628_45439
transcript_74956.nnic	chr2	-	557	2	NNC	ENSG00000184731.6	novel	552	2	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATGTGCCCCTTTTGAC	NA	False	NA	-18	True	AATAAA	-19	NA	46896	41219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_41628_46747
transcript_74957.known	chr2	-	471	2	FSM	ENSG00000184731.6	ENST00000461026.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTATGTGCCCCTTTTGA	NA	False	NA	-19	True	AATAAA	-18	NA	46870	41220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_41628_46806
transcript_74963.known	chr2	-	1279	11	FSM	ENSG00000035115.22	ENST00000403658.5	1279	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	96.8483350398963	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATATAAAAAGAGCTGACT	-10	True	NA	-31	True	NA	NA	NA	264810	218665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_242797_242872_243502_243563_247537_247603_249730_249845_253004_253116_264781
transcript_74967.known	chr2	-	1744	10	FSM	ENSG00000035115.22	ENST00000356150.10	1744	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	95.3251744760475	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	1	True	NA	-6	True	AATAAA	-25	NA	264032	218143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_74976.known	chr2	-	1695	9	FSM	ENSG00000035115.22	ENST00000403712.6	1695	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	66.1829849734809	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	1	True	NA	2	True	AATAAA	-33	NA	264032	218135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_74993.known	chr2	+	546	7	FSM	ENSG00000143727.16	ENST00000442386.5	546	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1263.83654226152	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCAGGTGCTGCAGAG	1	True	NA	NA	False	NA	NA	NA	264899	277261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_269300_269348_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_75010.known	chr2	+	573	6	FSM	ENSG00000143727.16	ENST00000484464.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1092.41175387305	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTGTAATCACGTTCC	266	False	NA	NA	False	NA	NA	NA	265204	277369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265279_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_75021.known	chr2	+	1474	6	FSM	ENSG00000143727.16	ENST00000272065.10	1474	6	0	0	0	0	multi-exon	FALSE	canonical	3	2212	junction_3	307.436887832283	8033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	8	True	NA	99	True	AATAAA	-36	NA	264946	278283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_75022.known	chr2	+	1552	6	FSM	ENSG00000143727.16	ENST00000272067.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1075.86047422517	2947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	NA	False	NA	99	True	AATAAA	-36	NA	264868	278283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272191_272306_275139_275202_276979_277086_277226
transcript_75023.known	chr2	+	689	5	FSM	ENSG00000143727.16	ENST00000413140.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1252.80994169108	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATGGGGTATTTTAA	-6	True	NA	14	True	AATAAA	-16	NA	264892	277506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272036_272151_276979_277086_277226
transcript_75024.known	chr2	+	703	3	FSM	ENSG00000143727.16	ENST00000407983.7	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	2646	junction_2	167	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCGGTGCTCTGTCTTCTG	1	True	NA	NA	False	GGGGCT	-1	NA	264899	272557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272036
transcript_75025.known	chr2	+	577	7	FSM	ENSG00000143727.16	ENST00000453390.5	577	7	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	1110.65171058358	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCACGTTCCAGGGCC	26	False	NA	NA	False	NA	NA	NA	264964	277375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272036_272066_272191_272306_275139_275202_276979_277086_277226
transcript_75026.known	chr2	+	414	6	FSM	ENSG00000143727.16	ENST00000405364.2	414	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	994.87518815176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAATCCTGTTTTTGAAGA	-20	True	NA	NA	False	NA	NA	NA	264918	275200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_269300_269348_271865_271940_272036_272066_272191_272306_275139
transcript_75027.known	chr2	-	1184	6	FSM	ENSG00000189292.16	ENST00000403610.9	1184	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.2187408536564	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCTTCAAAGTGACTCT	-16	True	NA	-6	True	AATAAA	-34	NA	288091	279557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_280153_283110_283176_286122_286204_286289_286344_287582_287893_288012
transcript_75028.known	chr2	-	526	5	FSM	ENSG00000189292.16	ENST00000401489.6	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	10.3047319227625	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACACAAAAGGA	1080	False	NA	NA	False	GATAAA	-36	NA	287687	279928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_280150_283110_283176_286122_286204_286289_286344_287582
transcript_75035.known	chr2	-	2572	6	FSM	ENSG00000151353.15	ENST00000432667.5	2572	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	123.765908068418	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTCTCAGGTAGTATC	0	True	NA	NA	False	ATTAAA	-20	NA	677406	667972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_677288
transcript_75039.known	chr2	-	654	5	FSM	ENSG00000151353.15	ENST00000405941.3	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	112.629924975559	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCAGCCAGCACTG	748	False	NA	NA	False	TTTAAA	-31	NA	676704	669422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_676573
transcript_75044.known	chr2	-	6187	5	FSM	ENSG00000151353.15	ENST00000281017.8	6187	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	12.9687123493429	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCTGTAAGTTACTG	0	True	NA	0	True	AATAAA	-32	NA	677406	663876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_677288
transcript_75045.known	chr2	-	577	1	FSM	ENSG00000272342.1	ENST00000606068.1	577	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACCTGTCACTTTGGGT	NA	False	NA	NA	False	AATAAA	-19	NA	740164	739587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_739600_740200
transcript_75048.nnic	chr2	-	877	3	FSM	ENSG00000235688.3	ENST00000456949.3	869	3	-8	0	-8	0	multi-exon	FALSE	canonical	2	13	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGACTCCGACTTG	-3	True	NA	-3	True	AATAAA	-29	NA	950773	949626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_949802_949910_950387_950547
transcript_75051.nnic	chr2	-	792	3	FSM	ENSG00000235688.3	ENST00000691420.1	722	3	-70	0	-8	0	multi-exon	FALSE	canonical	3	6	junction_1	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTACTTTTTCTGACTC	-3	True	NA	-10	True	AATAAA	-22	NA	950773	949633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_949802_949988_950387_950547
transcript_75053.nnic	chr2	-	979	2	FSM	ENSG00000235688.3	ENST00000692544.1	976	2	-10	7	-8	0	multi-exon	FALSE	canonical	3	17	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTACTTTTTCTGACTC	-3	True	NA	-10	True	AATAAA	-22	NA	950773	949633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_950387_950547
transcript_75054.nnic	chr2	-	1336	2	FSM	ENSG00000235688.3	ENST00000684906.1	1348	2	-365	377	-365	0	multi-exon	FALSE	canonical	3	8	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTACTTTTTCTGACTC	82	False	NA	-10	True	AATAAA	-22	NA	951867	949633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_950387_951284
transcript_75055.known	chr2	-	539	2	ISM	ENSG00000235688.3	ENST00000456949.3	869	3	491	0	429	0	3prime_fragment	FALSE	canonical	2	13	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGACTCCGACTTG	1675	False	NA	-3	True	AATAAA	-29	NA	950274	949626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_949802_949910
transcript_75068.nnic	chr2	+	676	2	NNC	ENSG00000172554.12	novel	1907	17	NA	NA	-648	-77613	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAATACCCCCAA	NA	False	NA	NA	False	AATAGA	-34	NA	950200	1084058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_950336_1083517
transcript_75070.known	chr2	-	1641	2	FSM	ENSG00000203635.2	ENST00000366424.2	1641	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGGAGCTACAATTCAAGA	-5	True	NA	NA	False	NA	NA	NA	1625419	1620509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_1621980_1625248
transcript_75071.known	chr2	-	6817	23	FSM	ENSG00000130508.11	ENST00000252804.9	6817	23	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_19	62.2271399161874	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTTTATTTTTTTTT	-2	True	NA	-1	True	AATAAA	-22	NA	1744515	1631886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
transcript_75077.known	chr2	-	1795	10	FSM	ENSG00000032389.13	ENST00000398659.8	1795	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	90.9224333643182	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTCTTTGTCCAT	4	True	NA	-2	True	NA	NA	NA	3377830	3188924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3274338_3274420_3338016_3338150_3354549_3354634_3377647
transcript_75080.known	chr2	-	1657	9	FSM	ENSG00000032389.13	ENST00000382125.9	1657	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	18.8331489666492	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	16	True	NA	-5	True	AATAAA	-17	NA	3377818	3188969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
transcript_75088.nic	chr2	-	1586	8	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	71.8408104131372	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	3377904	3188969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3338016_3338150_3354549_3354634_3377647
transcript_75092.known	chr2	-	847	7	FSM	ENSG00000032389.13	ENST00000455162.5	847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	83.0334604575502	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACAGCGTCTATGCCGT	46	False	NA	NA	False	NA	NA	NA	3377788	3189459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3354549_3354634_3377647
transcript_75093.known	chr2	-	1771	6	FSM	ENSG00000032389.13	ENST00000443925.6	1771	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	86.3258941453838	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGATTTTGAATAAAAGT	44	False	NA	NA	False	NA	NA	NA	3377790	3207803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3208958_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
transcript_75094.nic	chr2	-	1217	6	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	85.9660398064259	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	3	True	NA	-5	True	AATAAA	-17	NA	3377831	3188969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214170_3377647
transcript_7510.nnic	chr1	-	1235	3	NIC	ENSG00000224081.10	novel	3236	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTACTTCTTTAGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	94820287	94616351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_94617072_94679424_94679608_94819955
transcript_75101.nnic	chr2	+	1469	11	NIC	ENSG00000171853.16	novel	2499	12	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	49.634766041556	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	-28	True	NA	12	True	AATAAA	-13	NA	3379672	3479565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_3379877_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
transcript_75103.nic	chr2	+	1334	11	ISM	ENSG00000171853.16	ENST00000324266.10	2499	12	8908	0	475	0	3prime_fragment	FALSE	canonical	3	133	junction_6	22.1831016767268	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	446	False	NA	12	True	AATAAA	-13	NA	3388601	3479565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_3388671_3401776_3401894_3421880_3421995_3424524_3424664_3443778_3443892_3457620_3457694_3460262_3460337_3465596_3465696_3477694_3477796_3478845_3478934_3479218
transcript_75105.known	chr2	+	1538	2	FSM	ENSG00000171853.16	ENST00000482645.1	1538	2	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATATGGAAAAATATA	19	True	NA	0	True	AATAAA	-14	NA	3379719	3389000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3379877_3387619
transcript_75106.known	chr2	+	567	2	FSM	ENSG00000171853.16	ENST00000493792.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTGCGTGTCT	NA	False	NA	12	True	AATAAA	-13	NA	3478713	3479565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3478934_3479218
transcript_75107.known	chr2	-	908	2	FSM	ENSG00000225234.1	ENST00000453806.1	908	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTTTGGGAGGCCGAG	845	False	NA	NA	False	NA	NA	NA	3482409	3481241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3481886_3482145
transcript_75108.known	chr2	-	2181	4	FSM	ENSG00000182551.14	ENST00000327435.11	2181	4	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_3	49.5580467734555	908	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTGAATTTTGACAA	-10	True	NA	-3	True	AATAAA	-16	NA	3519531	3497365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3519367
transcript_75113.known	chr2	+	974	2	FSM	ENSG00000235078.1	ENST00000450917.1	974	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGAATCTGTTTAGATG	NA	False	NA	NA	False	NA	NA	NA	3519274	3523197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3519957_3522905
transcript_75119.known	chr2	-	5289	8	FSM	ENSG00000171865.10	ENST00000315212.4	5289	8	0	0	0	0	multi-exon	TRUE	canonical	3	456	junction_6	32.8621114255755	1551	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTCGTCTTTGTCTTCT	-2	True	NA	-1	True	AATAAA	-33	NA	3558333	3541429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
transcript_75123.known	chr2	+	1115	3	FSM	ENSG00000234171.4	ENST00000438436.4	1275	3	160	0	160	0	multi-exon	FALSE	canonical	3	66	junction_1	41.5	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTTAATTTTGTATA	-44	True	NA	NA	False	AATAAA	-39	NA	3558627	3561734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3558999_3559403_3559730_3561316
transcript_75124.nnic	chr2	+	997	3	NNC	ENSG00000234171.4	novel	4344	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	71.5	386	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTTAATTTTGTATA	-11	True	NA	NA	False	AATAAA	-39	NA	3558453	3561734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_3558751_3559447_3559730_3561316
transcript_75126.known	chr2	+	4333	3	FSM	ENSG00000234171.4	ENST00000664922.2	4344	3	11	0	6	0	multi-exon	FALSE	canonical	3	63	junction_1	43	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	9	True	NA	NA	False	NA	NA	NA	3558473	3564842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3558999_3559447_3559730_3561316
transcript_75134.known	chr2	+	836	2	FSM	ENSG00000234171.4	ENST00000426725.2	982	2	139	7	110	-3	multi-exon	FALSE	canonical	3	67	junction_1	0	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	25	True	NA	NA	False	AATAAA	-36	NA	3558577	3561731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3558999_3561316
transcript_75135.known	chr2	-	3700	2	FSM	ENSG00000287126.1	ENST00000656939.1	3700	2	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAACATTTAAAGAAAA	6	True	NA	NA	False	AATAAA	-16	NA	3575100	3568504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3571239_3574134
transcript_75136.known	chr2	+	710	7	FSM	ENSG00000171863.15	ENST00000646909.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4266.6979425937	38280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	-4	True	NA	NA	False	AATAAA	-19	NA	3575315	3580919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575351_3575556_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_75139.known	chr2	+	732	7	FSM	ENSG00000171863.15	ENST00000645674.2	732	7	0	0	0	0	multi-exon	FALSE	canonical	3	7472	junction_1	1928.32852203376	225560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGTTATGTTTTT	-12	True	NA	NA	False	AATAAA	-20	NA	3575259	3580920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_75140.known	chr2	+	557	7	FSM	ENSG00000171863.15	ENST00000647131.1	557	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	4215.16451504433	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACAAAAATGACTAAAT	1	True	NA	NA	False	NA	NA	NA	3575320	3580878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576558_3576631_3577709_3577775_3580109_3580261_3580804
transcript_75141.known	chr2	+	704	7	FSM	ENSG00000171863.15	ENST00000406376.1	704	7	0	0	0	0	multi-exon	TRUE	canonical	2	363	junction_1	4141.72288694237	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATATTCACAGTACT	4	True	NA	NA	False	AATAAA	-1	NA	3575357	3580901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575449_3575600_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_75142.known	chr2	+	511	3	FSM	ENSG00000171863.15	ENST00000479123.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	10507	junction_2	460.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAATAAGTTTTAAA	37	False	NA	NA	False	NA	NA	NA	3575632	3576873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575685_3575816_3575889_3576486
transcript_75143.known	chr2	+	556	2	FSM	ENSG00000171863.15	ENST00000472966.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	7626	junction_1	0	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTTCAGTTATGTTT	4011	False	NA	NA	False	AATAAA	-18	NA	3579818	3580918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3580261_3580804
transcript_75145.known	chr2	+	1425	7	FSM	ENSG00000118004.18	ENST00000349077.9	1425	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.74535599249993	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	0	True	NA	NA	False	AAAACA	-24	NA	3595111	3644644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_75146.known	chr2	+	1633	6	FSM	ENSG00000118004.18	ENST00000382062.6	1633	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.748331477354788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	NA	False	NA	NA	False	AAAACA	-24	NA	3594831	3644644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3640277_3640332_3643443_3643540_3643726
transcript_75147.known	chr2	+	1312	6	FSM	ENSG00000118004.18	ENST00000487365.5	1312	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTCCAAATAGTGGCA	NA	False	NA	20	True	AATAAA	-20	NA	3594954	3644446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3595169_3604314_3604471_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_75148.known	chr2	+	1240	5	FSM	ENSG00000118004.18	ENST00000460971.5	1240	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTCCAAATAGTGGCA	NA	False	NA	20	True	AATAAA	-20	NA	3594954	3644446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3595169_3604314_3604471_3640277_3640332_3643443_3643540_3643726
transcript_75155.known	chr2	+	9002	1	FSM	ENSG00000176887.7	ENST00000322002.5	9002	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	350	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTTTTTATGTGACT	-1	True	NA	20	True	AATAAA	-20	NA	5692383	5701385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_5692400_5701400
transcript_75159.known	chr2	+	2021	3	FSM	ENSG00000236106.3	ENST00000655406.1	2021	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAGTATCCCCAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	5726252	5730355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_5726580_5728086_5728153_5728727
transcript_75164.known	chr2	+	1746	2	FSM	ENSG00000236106.3	ENST00000413960.2	1769	2	11	12	11	-12	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATGTGAGTGGCTGC	NA	False	NA	NA	False	AATAAA	-4	NA	5726448	5730342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_5726580_5728727
transcript_75167.known	chr2	+	2695	2	FSM	ENSG00000232044.8	ENST00000444416.1	2695	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAGAATTAGGCAGTGA	NA	False	NA	NA	False	AATAAA	-26	NA	5981977	5984897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_5982073_5982297
transcript_7517.known	chr1	-	176	2	FSM	ENSG00000224081.10	ENST00000456551.1	176	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGGCCTCTGAGCACAA	NA	False	NA	NA	False	NA	NA	NA	94658250	94657924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94658056_94658205
transcript_75170.known	chr2	-	2834	2	FSM	ENSG00000228203.7	ENST00000437589.3	2834	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAGGTTGGGAGTTCA	NA	False	NA	NA	False	NA	NA	NA	6918666	6914772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_6917225_6918284
transcript_75172.known	chr2	-	469	2	FSM	ENSG00000230515.1	ENST00000414654.1	469	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTGAAGTTAATTCAC	NA	False	NA	NA	False	NA	NA	NA	7672246	7671603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_7671908_7672081
transcript_75173.known	chr2	+	243	2	FSM	ENSG00000235576.2	ENST00000690653.1	1204	2	91	870	3	-16	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGCCTTGCTATGAT	-1	True	NA	NA	False	ATTAAA	-14	NA	7725800	7730705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_7725854_7730515
transcript_75190.nnic	chr2	+	813	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	45	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	NA	False	NA	17	True	AATAAA	-17	NA	7876615	7891784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_7876789_7883431_7883560_7891272
transcript_75192.nnic	chr2	+	1297	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	45	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	NA	False	NA	-69	True	AATAAA	-15	NA	7876615	7892268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_7876789_7883431_7883560_7891272
transcript_75196.nnic	chr2	+	966	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	46.5	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTGTATTATTCTTAAA	-6	True	NA	14	True	AATAAA	-14	NA	7876639	7891781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_7876785_7878169_7878482_7891272
transcript_7520.known	chr1	+	2045	15	FSM	ENSG00000143036.17	ENST00000529450.5	2045	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	5.85365749958511	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	28	True	NA	13	True	AATAAA	-16	NA	94820400	94895053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867333_94867418_94891129_94891268_94892280_94892518_94894817
transcript_7521.known	chr1	+	2381	15	FSM	ENSG00000143036.17	ENST00000271227.11	2381	15	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_6	4.35245649616632	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAGCAGAAATCTCT	-16	True	NA	NA	False	AATAAA	-22	NA	94820356	94895246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_75211.known	chr2	+	1299	3	FSM	ENSG00000115738.10	ENST00000396290.2	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0.5	1809	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAGTGGTTTTTAAGAT	-1	True	NA	NA	False	AATAAA	-25	NA	8682055	8684461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_8682514_8682842_8682907_8683684
transcript_75213.nic	chr2	-	2157	16	ISM	ENSG00000134313.17	ENST00000689114.1	4389	22	-45	16741	-28	1804	5prime_fragment	FALSE	canonical	3	101	junction_5	16.8517720795833	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCCTTCCTTCCTTCT	NA	False	NA	NA	False	NA	NA	NA	8837658	8786202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_75215.known	chr2	-	7348	30	FSM	ENSG00000134313.17	ENST00000256707.8	7348	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.2364083339083	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCACATGTCTGAA	-4	True	NA	66	True	AATAAA	-16	NA	8837613	8728857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747144_8747202_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_75217.known	chr2	-	1227	7	FSM	ENSG00000143797.12	ENST00000471753.5	1227	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	57.4272486620149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATCTGGATGATAGAG	NA	False	NA	NA	False	NA	NA	NA	8877134	8858348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_8858905_8860612_8860765_8862270_8862323_8864169_8864235_8868445_8868550_8873107_8873301_8877029
transcript_75218.known	chr2	-	576	2	FSM	ENSG00000143797.12	ENST00000473432.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTGCCAGTGAAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	8861142	8858858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_8858905_8860612
transcript_75223.known	chr2	-	4859	8	FSM	ENSG00000119185.13	ENST00000360635.7	4859	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	158.71344991422	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	445	False	NA	NA	False	TATAAA	-23	NA	9423229	9403474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9422478
transcript_75241.known	chr2	-	1027	5	FSM	ENSG00000119185.13	ENST00000490426.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	136.861928599593	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACTAGATGTCACAG	37	True	NA	NA	False	NA	NA	NA	9423462	9406348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9423372
transcript_75245.known	chr2	-	560	4	FSM	ENSG00000119185.13	ENST00000497031.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	153.338405713202	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	230	False	NA	-10	True	ATTAAA	-34	NA	9423444	9406647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9423372
transcript_75248.known	chr2	-	1772	6	FSM	ENSG00000119185.13	ENST00000238091.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	111.687062813918	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-7	True	NA	-18	True	AATAAA	-2	NA	9423506	9405683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_75249.known	chr2	-	861	6	FSM	ENSG00000119185.13	ENST00000464228.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	131.266141864534	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-1	True	NA	-22	True	ATTAAA	-22	NA	9423500	9406659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9418625_9418733_9423372
transcript_75250.known	chr2	-	874	7	FSM	ENSG00000119185.13	ENST00000488451.5	874	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	171.495059857582	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGTTAACTCTCAAT	19	True	NA	-29	True	ATTAAA	-15	NA	9423480	9406666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_75253.known	chr2	+	2259	18	FSM	ENSG00000119203.14	ENST00000238112.8	2259	18	0	0	0	0	multi-exon	TRUE	canonical	3	784	junction_10	109.390763322805	1990	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTACTTTTAATGTC	-18	True	NA	24	True	AATAAA	-23	NA	9423653	9473101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
transcript_75268.known	chr2	-	4391	19	FSM	ENSG00000151694.14	ENST00000310823.8	4391	19	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_17	19.5151096889779	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACCTAAGTATAAAACTT	24	False	9555854	-5	True	AATAAA	-17	NA	9555830	9488485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
transcript_7528.known	chr1	+	1912	14	FSM	ENSG00000143036.17	ENST00000532427.5	1912	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.24926031125843	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAACCCTATTCTTC	0	True	NA	-11	True	TTTAAA	-4	NA	94820649	94895029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820724_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_75282.known	chr2	+	863	6	FSM	ENSG00000134330.19	ENST00000482918.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	58.264912254289	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAGATGATTTTTCAGG	7	True	NA	-1	True	AATAAA	-2	NA	9473817	9488444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9473900_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_75289.known	chr2	+	2176	6	FSM	ENSG00000134330.19	ENST00000497473.6	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	29.962643408084	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	5	True	NA	NA	False	NA	NA	NA	9474550	9489742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9474648_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_7529.known	chr1	+	2061	14	FSM	ENSG00000143036.17	ENST00000467909.5	2061	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.8985506192864	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	17	False	NA	13	True	AATAAA	-16	NA	94820620	94895053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820724_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_75291.known	chr2	+	837	6	FSM	ENSG00000134330.19	ENST00000351760.11	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.7070498403545	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	32	False	NA	17	True	AATAAA	-20	NA	9474577	9488462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9474648_9475986_9476040_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_75296.known	chr2	+	1011	6	FSM	ENSG00000134330.19	ENST00000481688.1	1011	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.8934568431914	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAGACCATTAGCCAAT	312	False	NA	NA	False	NA	NA	NA	9474857	9488314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9475218_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_75298.nic	chr2	+	1013	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	59.6882526130561	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	NA	False	NA	17	True	AATAAA	-20	NA	9473632	9488462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_75299.nic	chr2	+	1173	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	59.6882526130561	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTTGAGAACTGTTT	NA	False	NA	29	True	TATAAA	-15	NA	9473632	9488622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_753.known	chr1	-	2004	18	FSM	ENSG00000127054.22	ENST00000527098.5	2004	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	147.729904107036	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTGGACAGACCCTGG	-9	True	NA	NA	False	NA	NA	NA	1324666	1311822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1323180_1323288_1324580
transcript_75304.known	chr2	+	2137	5	FSM	ENSG00000134330.19	ENST00000470914.5	2137	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	60.1123947285416	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	-9	True	NA	NA	False	NA	NA	NA	9474536	9489742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9474648_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_75306.known	chr2	+	818	5	FSM	ENSG00000134330.19	ENST00000492223.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	67.7661419884591	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGAAGTTTTATACT	-7	True	NA	12	True	AATAAA	-15	NA	9474538	9488457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9474648_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_7531.known	chr1	-	792	7	FSM	ENSG00000117519.16	ENST00000415017.1	792	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1484.94956891546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTATGATCAGAAGCTAA	1708	False	NA	NA	False	NA	NA	NA	94925801	94898051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94925632
transcript_75316.known	chr2	+	877	1	FSM	ENSG00000271855.1	ENST00000607241.1	877	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGCTGTTTTATTTAG	439	False	NA	19	True	AATAAA	-22	NA	9555898	9556775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9555900_9556800
transcript_75317.known	chr2	+	759	3	FSM	ENSG00000134330.19	ENST00000484826.1	759	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	16.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTTGAGAACTGTTT	1452	False	NA	29	True	TATAAA	-15	NA	9481283	9488622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9481448_9484431_9484551_9488146
transcript_75318.known	chr2	-	3488	19	FSM	ENSG00000151694.14	ENST00000649227.1	3488	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	38.511862850905	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCTCAAAAAAAAAAAAAAAA	-11	True	NA	NA	False	NA	NA	NA	9555788	9489287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543227_9555508
transcript_75319.known	chr2	-	1073	5	FSM	ENSG00000151694.14	ENST00000478059.1	1073	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	12.8160056179763	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAAAATAATATGGTGGA	3	True	NA	NA	False	NA	NA	NA	9555774	9527500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
transcript_7532.known	chr1	-	1991	7	FSM	ENSG00000117519.16	ENST00000370206.9	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	3614	junction_1	241.144090166486	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACCACAGGCTGATTA	3	True	NA	-6	True	AATAAA	-20	NA	94927110	94896956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
transcript_75320.known	chr2	-	2196	6	FSM	ENSG00000134308.14	ENST00000238081.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	2338	junction_5	582.685026407921	2307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGATTGTGAGTGCCT	-4	True	NA	-7	True	AATAAA	-29	NA	9630997	9583966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
transcript_75330.known	chr2	+	2267	15	FSM	ENSG00000115750.17	ENST00000263663.10	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	8.71545659581122	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGTCAATTTTTGCA	4	True	NA	29	True	TATAAA	-45	NA	9843473	9934416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_75339.known	chr2	+	1592	14	FSM	ENSG00000115750.17	ENST00000434858.5	1592	14	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_6	19.9902343021692	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATCAAGATCCAAG	4	True	NA	NA	False	AATACA	-10	NA	9843524	9933946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_75340.nic	chr2	+	1528	13	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-121	15308	-90	5399	5prime_fragment	FALSE	canonical	3	52	junction_9	9.24511883223911	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAAGTCAAATTTTGTC	NA	False	NA	NA	False	TATAAA	-5	NA	9843352	9919108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040
transcript_75342.nic	chr2	+	1920	12	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-121	20707	-90	0	5prime_fragment	FALSE	canonical	3	52	junction_9	9.63207451716048	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATAGCAAGTCCATTTG	NA	False	NA	NA	False	AATAAA	-30	NA	9843352	9913709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158
transcript_75344.nic	chr2	+	1292	11	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-45	22860	-14	-2153	5prime_fragment	FALSE	canonical	3	52	junction_9	9.87927122818278	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTTAATTTTTTATCA	-41	True	NA	NA	False	AATGAA	-13	NA	9843428	9911556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510
transcript_75346.nnic	chr2	+	1111	8	NNC	ENSG00000115750.17	novel	2267	15	NA	NA	-11	11050	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_7	27.2546569696009	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATTCAGTGGTTTTCAA	-38	True	NA	NA	False	AATAAA	-19	NA	9843431	9879814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9879520
transcript_75347.known	chr2	+	715	7	FSM	ENSG00000115750.17	ENST00000402170.5	715	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	29.7769485788364	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATGTAGCCATATAGTA	12	True	NA	NA	False	AAGAAA	-20	NA	9843481	9868764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9868662
transcript_75348.nic	chr2	+	1366	7	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-45	57852	-14	7800	5prime_fragment	FALSE	canonical	3	62	junction_1	8.98919104010787	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCTCACTTAATAGAC	-41	True	NA	NA	False	AATAAA	-19	NA	9843428	9876564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864
transcript_75349.nic	chr2	+	1558	7	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-42	57657	-11	7995	5prime_fragment	FALSE	canonical	3	62	junction_1	8.98919104010787	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATTTGTCTCTGCTTTT	-38	True	NA	NA	False	NA	NA	NA	9843431	9876759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864
transcript_75352.known	chr2	+	505	5	FSM	ENSG00000115750.17	ENST00000404869.7	505	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.5396575758203	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACACCAATCACTGGAC	27	True	NA	NA	False	NA	NA	NA	9843496	9852124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9851967
transcript_75355.known	chr2	+	554	6	FSM	ENSG00000115750.17	ENST00000480197.5	554	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	31.8144621202371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGACATCCACACTCGAA	182	False	NA	NA	False	NA	NA	NA	9843702	9868376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843775_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275
transcript_75356.known	chr2	+	642	2	FSM	ENSG00000115750.17	ENST00000497182.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAACAATTAGCCA	-2	True	NA	NA	False	NA	NA	NA	9843518	9845820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843560_9845219
transcript_75357.known	chr2	+	3568	16	FSM	ENSG00000134317.18	ENST00000324907.14	3568	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	5.78350143847902	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCATTTCCTGTTTTTC	-18	True	NA	11	True	ATTAAA	-22	NA	9951692	10002277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9951854_9954914_9955102_9958785_9958857_9961045_9961437_9962454_9962532_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
transcript_7536.known	chr1	+	1614	4	FSM	ENSG00000235501.7	ENST00000438509.3	1615	4	0	1	0	0	multi-exon	FALSE	canonical	3	13	junction_3	7.48331477354788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	2	True	NA	13	True	AATAAA	-20	NA	94927365	94963270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962924
transcript_75361.nnic	chr2	-	1678	2	Genic_Genomic	ENSG00000260077.1	novel	1572	1	NA	NA	-2757	-6	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTTTGGGGTCTGGC	NA	False	NA	-5	True	AATACA	-18	NA	10043420	10039097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_10040665_10043309
transcript_75363.nnic	chr2	-	460	2	Genic_Genomic	ENSG00000260077.1	novel	1572	1	NA	NA	-2757	-1224	multi-exon	FALSE	canonical	3	8	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAGACTGCATATG	NA	False	NA	NA	False	AAAAAG	-11	NA	10043420	10040315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_10040665_10043309
transcript_75364.known	chr2	-	1572	1	FSM	ENSG00000260077.1	ENST00000567540.1	1572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGTCTGGCTTCTTT	2433	False	NA	1	True	AATACA	-24	NA	10040663	10039091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10039100_10040700
transcript_75369.known	chr2	+	3258	10	FSM	ENSG00000171848.16	ENST00000304567.10	3258	10	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_4	85.32219255979	3624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTTGATTGGTAAAATT	0	True	NA	19	True	AATAAA	-16	NA	10122738	10131414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_7537.known	chr1	+	1514	4	FSM	ENSG00000235501.7	ENST00000659935.1	1514	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	6.16441400296898	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	11	True	NA	13	True	AATAAA	-20	NA	94927411	94963270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962978
transcript_75370.known	chr2	+	644	5	FSM	ENSG00000171848.16	ENST00000491447.1	644	5	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_4	55.3731658838467	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCACTAATTGTT	13	False	NA	NA	False	CATAAA	-44	NA	10122751	10124878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716
transcript_75371.known	chr2	+	3240	8	FSM	ENSG00000171848.16	ENST00000615152.5	3240	8	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_2	93.8763841986049	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTTGATTGGTAAAATT	432	False	NA	19	True	AATAAA	-16	NA	10123170	10131414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_75374.nnic	chr2	+	1635	5	NNC	ENSG00000115756.13	novel	4781	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.5297940356222	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTTTCTGAGTTTTGC	9920	False	NA	13	True	AATAAA	-1	NA	10324346	10427604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_10324507_10396834_10396921_10419733_10420136_10422982_10423089_10426723
transcript_75376.known	chr2	-	2476	12	FSM	ENSG00000115758.13	ENST00000234111.9	2476	12	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_6	42.8231033651017	930	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTGTGTATCTTCACC	0	True	NA	NA	False	AATAAA	-22	NA	10448327	10439967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
transcript_7538.known	chr1	+	1418	3	FSM	ENSG00000235501.7	ENST00000659966.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	10.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAATAAAGCTTTTTAT	-3	True	NA	-17	True	AAGAAA	-8	NA	94927360	94963240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94928403_94931871_94931986_94962978
transcript_75390.known	chr2	-	593	4	FSM	ENSG00000115761.16	ENST00000473087.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	112.226952595573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGGCCAATCTAATATC	0	True	NA	NA	False	AATACA	-14	NA	10689975	10673321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10673558_10675793_10675872_10681970_10682070_10689795
transcript_75391.known	chr2	-	3498	21	FSM	ENSG00000115761.16	ENST00000381685.10	3498	21	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_10	27.6504520758703	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACTCCAAGAAAATTT	0	True	NA	NA	False	AATAAA	-29	NA	10689975	10570753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_75392.known	chr2	-	2509	14	FSM	ENSG00000143870.13	ENST00000540494.5	2509	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	3047.69408418385	5461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTGAGCAATTTCT	NA	False	NA	-29	True	AATAAA	-14	NA	10812839	10783392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10810242_10810421_10812677
transcript_75402.known	chr2	-	2279	13	FSM	ENSG00000143870.13	ENST00000272227.8	2279	13	0	0	0	0	multi-exon	FALSE	canonical	3	7534	junction_3	656.3326297186	12779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGAGCAATTTCTCT	25	False	10812810	-27	True	AATAAA	-16	NA	10812785	10783390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
transcript_75403.known	chr2	+	461	2	FSM	ENSG00000271952.3	ENST00000607419.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGGTTTTTAATTA	NA	False	NA	NA	False	ATTAAA	-19	NA	10878268	10885118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10878445_10884833
transcript_75404.known	chr2	+	2292	1	FSM	ENSG00000162975.5	ENST00000295082.3	2292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCGTGTTGTAGGTTCT	-6	True	NA	15	True	AATAAA	-18	NA	10911933	10914225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10911900_10914200
transcript_75410.nnic	chr2	+	796	5	NNC	ENSG00000150873.12	novel	7902	3	NA	NA	-3033	3259	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.82915619758885	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTCCTTCCCTTTCCCTC	NA	False	NA	NA	False	AATACA	-26	NA	11130094	11154576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_11130367_11130469_11130520_11140509_11140550_11143919_11144143_11154365
transcript_75412.nnic	chr2	+	1101	4	NNC	ENSG00000150873.12	novel	980	4	NA	NA	-163	3259	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTCCTTCCCTTTCCCTC	650	False	NA	NA	False	AATACA	-26	NA	11132964	11154576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_11133592_11140509_11140550_11143919_11144143_11154365
transcript_75413.known	chr2	+	1717	7	FSM	ENSG00000162976.13	ENST00000295083.8	1717	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	32.8312182059833	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	13	True	NA	5	True	AATAAA	-16	NA	11155466	11178856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11174967_11175010_11177736
transcript_75414.known	chr2	+	1784	6	FSM	ENSG00000162976.13	ENST00000441908.6	1784	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	56.8422378166096	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGTCAATCATTAATA	NA	False	NA	19	True	AATAAA	-30	NA	11155371	11178870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11177736
transcript_75415.known	chr2	+	453	3	FSM	ENSG00000162976.13	ENST00000464700.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAAATGCAAACGTGT	11	False	NA	NA	False	ACTAAA	-16	NA	11155514	11160819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624
transcript_75420.known	chr2	+	2900	3	FSM	ENSG00000285569.3	ENST00000656821.1	2900	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGAAGAAATATAGATAAT	6459	False	NA	NA	False	AATAAA	-3	NA	11405507	11427167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11407364_11421170_11421267_11426219
transcript_75421.known	chr2	-	2227	9	FSM	ENSG00000169016.17	ENST00000455198.5	2227	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.1430064762207	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTGAGTGGAGTGAG	281	False	NA	NA	False	AATAAA	-10	NA	11465879	11445299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11458280_11458352_11465771
transcript_75424.known	chr2	-	1253	8	FSM	ENSG00000169016.17	ENST00000437573.5	1253	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.686928095213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTTGAGAATTTATGT	7	False	NA	NA	False	AAGAAA	-42	NA	11466153	11446476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11465771
transcript_75425.known	chr2	-	3296	8	FSM	ENSG00000169016.17	ENST00000444832.5	3296	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.2869852466762	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	4	False	NA	0	True	TATAAA	-25	NA	11466156	11444374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11458280_11458352_11465771
transcript_75427.known	chr2	-	3230	7	FSM	ENSG00000169016.17	ENST00000381525.8	3230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.2407909945038	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-1	True	NA	0	True	TATAAA	-25	NA	11466161	11444374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11465771
transcript_75430.known	chr2	-	3191	6	FSM	ENSG00000169016.17	ENST00000546212.2	3191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.7960372045236	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	NA	False	NA	0	True	TATAAA	-25	NA	11466177	11444374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11465771
transcript_75435.known	chr2	-	1061	4	FSM	ENSG00000169016.17	ENST00000468775.1	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	43.8254111979188	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAGGTAAAAGTTGGTAG	57	False	NA	NA	False	NA	NA	NA	11466103	11451349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11451807_11453581_11453799_11457178_11457234_11465771
transcript_75437.nnic	chr2	+	1590	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	528	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_4	14.8856754409511	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAATTCTGCTCCAAG	9	True	NA	9	True	AATAAA	-17	NA	11482868	11581265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
transcript_75442.known	chr2	+	275	1	FSM	ENSG00000239899.3	ENST00000463397.3	275	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GATTAGAAAAAAAAAAACAA	NA	False	NA	NA	False	NA	NA	NA	11584772	11585047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11584800_11585000
transcript_75445.nic	chr2	+	1747	8	ISM	ENSG00000134324.12	ENST00000256720.6	5384	20	-13	43096	-13	0	5prime_fragment	FALSE	canonical	3	42	junction_5	2.47435829652697	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGTGTGAGAG	NA	False	NA	NA	False	NA	NA	NA	11746574	11784313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_11746672_11765532_11765734_11767762_11767859_11771371_11771680_11773619_11773746_11779518_11779646_11782200_11782508_11783828
transcript_75450.known	chr2	+	1059	2	FSM	ENSG00000228496.2	ENST00000455754.2	1085	2	26	0	-1	0	multi-exon	FALSE	canonical	2	3	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGCGTCATGTGTCAT	25	False	NA	4	True	CATAAA	-16	NA	11681459	11683323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11681493_11682297
transcript_75451.known	chr2	+	1170	2	FSM	ENSG00000228496.2	ENST00000435175.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCATGTGTCATTTTGT	26	False	NA	9	True	CATAAA	-21	NA	11681460	11683328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11681493_11682190
transcript_75452.known	chr2	-	561	3	FSM	ENSG00000230790.2	ENST00000431500.2	561	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAATTTATGAGAAG	8341	False	NA	NA	False	AGTAAA	-27	NA	11745301	11740996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11741303_11742036_11742157_11745166
transcript_75459.known	chr2	+	2778	3	FSM	ENSG00000071575.12	ENST00000381465.2	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	147.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	-25	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_12717011_12723259_12723553_12740325
transcript_7546.known	chr1	+	796	5	FSM	ENSG00000122481.17	ENST00000497058.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	114.718132829993	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	16	True	NA	16	True	ATTAAA	-16	NA	95234224	95247223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95239776_95239811_95244564_95244652_95246541_95246658_95246755
transcript_75460.known	chr2	+	4344	3	FSM	ENSG00000071575.12	ENST00000155926.9	4344	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	13	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	-24	True	NA	77	True	AATAAA	-22	NA	12716935	12742734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_12718578_12723259_12723553_12740325
transcript_75461.known	chr2	+	830	3	FSM	ENSG00000071575.12	ENST00000405331.3	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	136.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCATTTAGAAGATGA	-1	True	NA	17	True	AATAAA	-23	NA	12718237	12724825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_12718578_12723259_12723553_12724628
transcript_75462.known	chr2	-	1487	3	FSM	ENSG00000225649.7	ENST00000662366.1	1487	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAATATCTAATAACTC	8	True	NA	NA	False	AATAAA	-11	NA	13006984	12966788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_12968034_13003823_13003952_13006870
transcript_75463.known	chr2	-	7278	52	FSM	ENSG00000151779.13	ENST00000281513.10	7278	52	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_38	24.2373563435063	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAAGCTGCCGCTTTTT	-11	True	NA	-27	True	AATAAA	-16	NA	15561334	15166915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
transcript_75466.nnic	chr2	-	1050	12	NIC	ENSG00000151779.13	novel	7278	52	NA	NA	-8	13	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	28.4950336400707	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAGGTGAGTTCTACGAA	-19	True	NA	NA	False	NA	NA	NA	15561342	15478231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_15478290_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
transcript_75474.known	chr2	+	2465	26	FSM	ENSG00000079785.16	ENST00000678594.1	2465	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	347.630599343614	2070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-23	True	NA	11	True	AATAAA	-14	NA	15591867	15631101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15591950_15595144_15595197_15595508_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_75476.known	chr2	+	2423	25	FSM	ENSG00000079785.16	ENST00000677437.1	2423	25	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	352.897293840573	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-23	True	NA	11	True	AATAAA	-14	NA	15591867	15631101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_75478.known	chr2	+	2384	24	FSM	ENSG00000079785.16	ENST00000617198.5	2384	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	358.429450628021	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	287	False	NA	11	True	AATAAA	-14	NA	15591851	15631101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15591950_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_75483.nic	chr2	+	523	5	ISM	ENSG00000079785.16	ENST00000459706.2	3354	18	-222	25510	-87	-25510	5prime_fragment	FALSE	canonical	3	1506	junction_1	107.755220291177	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAATTAAAACTGGTGCT	81	False	NA	41	True	AAAAAG	-7	NA	15591645	15597447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374
transcript_75485.known	chr2	+	4007	23	FSM	ENSG00000079785.16	ENST00000677355.1	4007	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	485.459339863965	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	-22	True	NA	11	True	AATAAA	-14	NA	15591868	15631101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617221_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15628840_15629601_15629698_15629989_15630108_15630775
transcript_75486.known	chr2	-	1313	4	FSM	ENSG00000233718.9	ENST00000641263.1	1313	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.71404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGATCGATTGACTTCA	4222	False	NA	0	True	ATTAAA	-14	NA	15941582	15936264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_15937177_15938499_15938726_15940973_15941098_15941531
transcript_7549.known	chr1	+	1294	5	FSM	ENSG00000122481.17	ENST00000495272.5	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	96.5789832209886	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGTTTTCATG	12	True	NA	10	True	ATTAAA	-10	NA	95234220	95247217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95239776_95239910_95244210_95244699_95246541_95246658_95246755
transcript_75491.known	chr2	-	770	3	FSM	ENSG00000233718.9	ENST00000419083.6	776	3	6	0	6	0	multi-exon	FALSE	canonical	3	10	junction_2	3.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGGCGCCGCGGTGGT	4081	False	NA	NA	False	AATAAA	-23	NA	15941723	15939897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_15940352_15940973_15941098_15941531
transcript_75493.known	chr2	+	1693	2	FSM	ENSG00000134323.12	ENST00000638417.1	1693	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTCAACCTTTTCCTT	15	False	NA	19	True	AATAAA	-19	NA	15940565	15947007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15940744_15945492
transcript_75494.known	chr2	+	2613	3	FSM	ENSG00000134323.12	ENST00000281043.4	2613	3	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGCAACTCAACCTTTTC	-1	True	NA	16	True	AATAAA	-16	NA	15940549	15947004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15940744_15941947_15942855_15945492
transcript_75495.known	chr2	-	496	2	FSM	ENSG00000233718.9	ENST00000641387.2	794	2	71	227	10	64	multi-exon	FALSE	canonical	3	17	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTGTTGTGCAGCTG	4566	False	NA	NA	False	NA	NA	NA	15941238	15940120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_15940352_15940973
transcript_75499.known	chr2	-	642	4	FSM	ENSG00000236989.5	ENST00000412381.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	1.88561808316413	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGAATCTTGCAATTG	NA	False	NA	NA	False	NA	NA	NA	16105841	16085221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_16085484_16097358_16097463_16105414_16105544_16105694
transcript_75503.nic	chr2	-	983	4	NIC	ENSG00000236989.5	novel	853	3	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	0.942809041582063	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGCTTCAATTAACA	NA	False	NA	NA	False	AATAAA	-34	NA	16105943	16096425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_16096927_16097358_16097463_16105414_16105544_16105694
transcript_75509.nnic	chr2	-	784	3	NNC	ENSG00000236989.5	novel	853	3	NA	NA	2715	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGCTTCAATTAACA	116	False	NA	NA	False	AATAAA	-34	NA	16102947	16096425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_16096927_16097358_16097463_16102768
transcript_75510.known	chr2	-	853	3	FSM	ENSG00000236989.5	ENST00000428280.1	853	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGCTTCAATTAACA	NA	False	NA	NA	False	AATAAA	-34	NA	16105662	16096425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_16096927_16097358_16097463_16105414
transcript_75511.known	chr2	-	4670	12	FSM	ENSG00000197872.11	ENST00000381323.7	4670	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	6.99704778359777	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTCTATTTTATATGA	-5	True	NA	0	True	ATTAAA	-23	NA	16665834	16549458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16565645_16565768_16588049_16588130_16623863_16624020_16665779
transcript_75531.known	chr2	+	2428	4	FSM	ENSG00000163032.12	ENST00000295156.9	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	44.0100998509307	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTATTCATTCATTTA	-1	True	NA	NA	False	ACTAAA	-12	NA	17540695	17657018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17540919_17592069_17592237_17649409_17649626_17655196
transcript_75548.known	chr2	+	576	3	FSM	ENSG00000163032.12	ENST00000457525.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	260	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATGCTGGAGATCATC	-9	True	NA	NA	False	NA	NA	NA	17539966	17649602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17540183_17592069_17592237_17649409
transcript_7555.known	chr1	+	1180	4	FSM	ENSG00000122481.17	ENST00000370202.5	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	66.5482281256734	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATGTTTGCTTT	1	True	NA	18	True	ATTAAA	-18	NA	95234209	95247225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755
transcript_75550.known	chr2	-	5240	28	FSM	ENSG00000163029.16	ENST00000448223.7	5240	28	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_27	76.6114311670232	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	3	True	NA	1	True	AATAAA	-19	NA	17753810	17663811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
transcript_75553.known	chr2	-	5173	27	FSM	ENSG00000163029.16	ENST00000351948.8	5173	27	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_26	39.1884575749109	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17	True	NA	1	True	AATAAA	-19	NA	17753830	17663811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_75556.nic	chr2	-	2692	21	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-12	32539	-12	6806	5prime_fragment	FALSE	canonical	3	240	junction_20	31.5808090460013	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTTGGATACCTTAAAT	NA	False	NA	20	True	AAAAAG	-1	NA	17753842	17696350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_75559.nic	chr2	-	2476	20	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-12	36536	-12	2809	5prime_fragment	FALSE	canonical	3	240	junction_19	31.4593348736511	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATGGTTGAGGAACAT	NA	False	NA	NA	False	AATAAA	-8	NA	17753842	17700347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_75562.nic	chr2	-	2364	18	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-12	39345	-12	0	5prime_fragment	FALSE	canonical	3	240	junction_17	32.7900947150002	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAATAATAATAATA	NA	False	NA	NA	False	TATAAA	-10	NA	17753842	17703156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_75566.nic	chr2	-	1559	13	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-12	52938	-12	0	5prime_fragment	FALSE	canonical	3	240	junction_12	35.0225126010241	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAATTAAGTAAGTTGCAA	NA	False	NA	-7	True	NA	NA	NA	17753842	17716749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_75569.nic	chr2	-	923	8	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-12	61470	-12	-8532	5prime_fragment	FALSE	canonical	3	240	junction_7	34.8875745379764	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGCAGATACATCAAGGAG	NA	False	NA	NA	False	AAGAAA	-8	NA	17753842	17725281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_75571.nic	chr2	-	463	2	ISM	ENSG00000163029.16	ENST00000621152.4	500	4	-9	11193	-8	-11136	5prime_fragment	FALSE	canonical	3	46	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAATCTCCTGACTTTT	NA	False	NA	NA	False	AATATA	-22	NA	17753838	17752814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_17753065_17753625
transcript_75574.known	chr2	+	9854	14	FSM	ENSG00000178295.15	ENST00000317402.11	9854	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	14.5581876757503	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGATGCCAGATGCCAG	-8	True	NA	NA	False	ATTAAA	-21	NA	17753857	17788941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17753968_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_75576.known	chr2	+	9957	14	FSM	ENSG00000178295.15	ENST00000381254.7	9957	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	13.8918050850388	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAGATGCCAGAAGCC	-7	True	NA	NA	False	ATTAAA	-26	NA	17754137	17788946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_75579.known	chr2	+	2397	3	FSM	ENSG00000170745.12	ENST00000403915.5	2397	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	56.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGAATGTCTTGGTTGTA	0	True	NA	16	True	AATAAA	-16	NA	17877846	17932954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17878047_17917679_17917872_17930949
transcript_75580.known	chr2	+	2341	3	FSM	ENSG00000170745.12	ENST00000304101.9	2341	3	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	2	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	8	True	NA	20	True	AATAAA	-20	NA	17878666	17932958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17878807_17917679_17917872_17930949
transcript_75581.known	chr2	+	553	3	FSM	ENSG00000170745.12	ENST00000419802.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGATATGTTTTGAAT	692	False	NA	NA	False	NA	NA	NA	17879382	17931231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17879462_17917679_17917872_17930949
transcript_75582.known	chr2	-	1560	2	FSM	ENSG00000240857.2	ENST00000381249.4	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATTTCTTTGGAGGC	6	True	NA	-7	True	AATAAA	-22	NA	18560653	18554722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_18555809_18560179
transcript_75583.known	chr2	-	737	2	FSM	ENSG00000240857.2	ENST00000468071.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAACTTGTTACTTGAA	-20	True	NA	NA	False	TATAAA	-41	NA	18560679	18555121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_18555809_18560629
transcript_75591.nnic	chr2	-	646	2	NNC	ENSG00000236204.6	novel	571	5	NA	NA	-172	-251649	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTGTGTCATGTGTT	NA	False	NA	NA	False	AATACA	-22	NA	19306226	19296514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_19296757_19305822
transcript_75593.known	chr2	+	2489	6	FSM	ENSG00000228784.9	ENST00000433669.2	2489	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.72046505340853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATACAAAAATTAGACA	-10	True	NA	NA	False	NA	NA	NA	19868873	19877535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_19868953_19869495_19869614_19870424_19870547_19872392_19872597_19873131_19873365_19875802
transcript_75594.nic	chr2	+	525	2	ISM	ENSG00000228784.9	ENST00000607100.5	2239	5	-38	7504	-38	-2641	5prime_fragment	FALSE	canonical	1	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAGCATTTCCAGGTG	NA	False	NA	NA	False	AATAGA	-33	NA	19868821	19869889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_19868953_19869495
transcript_75599.known	chr2	-	941	3	FSM	ENSG00000183891.6	ENST00000333610.4	941	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	66.5	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-18	True	NA	-11	True	AATAAA	-18	NA	19901983	19896630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_19897127_19897868_19898036_19901705
transcript_75606.nnic	chr2	-	889	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-55	-111	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	69.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGGTATTTTCTT	-14	True	NA	-29	True	ATTAAA	-15	NA	19901696	19896753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_19897127_19897868_19898164_19901475
transcript_75609.known	chr2	-	6898	27	FSM	ENSG00000118965.16	ENST00000281405.9	6898	27	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_4	14.6188255058879	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTGTTTATTCCACG	5	True	NA	-1	True	AATAAA	-16	NA	19990105	19910262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_19913709_19914036_19914278_19930395_19930553_19931268_19931410_19932282_19932448_19933400_19933512_19935470_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_75613.nnic	chr2	-	2514	11	NNC	ENSG00000118965.16	novel	6898	27	NA	NA	-52	-16209	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	41.8522400834173	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAGAAAAAA	-47	True	NA	NA	False	AAAAAG	-1	NA	19990157	19964380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_19965559_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_75618.nic	chr2	-	1082	5	ISM	ENSG00000118965.16	ENST00000414212.5	3483	28	-109	64689	-52	-30075	5prime_fragment	FALSE	canonical	3	125	junction_4	9.19238815542512	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTTCTCTCTCTCGC	-47	True	NA	NA	False	GATAAA	-19	NA	19990157	19978246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_75619.nic	chr2	-	913	5	ISM	ENSG00000118965.16	ENST00000414212.5	3483	28	-109	64858	-52	-30244	5prime_fragment	FALSE	canonical	3	125	junction_4	9.19238815542512	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTCGTTTTTATTG	-47	True	NA	NA	False	AATATA	-20	NA	19990157	19978415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_75622.nic	chr2	-	1134	3	ISM	ENSG00000118965.16	ENST00000414212.5	3483	28	-109	68127	-52	-33513	5prime_fragment	FALSE	canonical	3	125	junction_2	6.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCAGGCGTGGTGCTGT	-47	True	NA	NA	False	AATAAA	-6	NA	19990157	19981684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_19982535_19989164_19989283_19989991
transcript_75625.known	chr2	+	1132	3	FSM	ENSG00000227210.2	ENST00000416575.2	1132	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGAAATAAATTATATTG	NA	False	NA	NA	False	AATAAA	-19	NA	19990210	20004795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_19990495_19999205_19999278_20004019
transcript_7563.nnic	chr1	+	757	3	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-67	0	combination_of_known_splicesites	FALSE	canonical	3	110	junction_1	87.5	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	NA	False	NA	16	True	ATTAAA	-16	NA	95234142	95247223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_95234316_95246541_95246658_95246755
transcript_75634.known	chr2	-	1365	7	FSM	ENSG00000068697.7	ENST00000175091.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	3609	junction_3	333.62874409872	33024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCATTGTTTTTAAT	-4	True	NA	-17	True	AATAAA	-17	NA	20051628	20032649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
transcript_75639.nnic	chr2	-	337	2	Genic_Genomic	ENSG00000055917.16	novel	525	5	NA	NA	-71	-30920	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATTTTCAACTTGTTT	1882	False	NA	NA	False	AATAAA	-17	NA	20350372	20349512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_20349590_20350112
transcript_75640.known	chr2	-	6309	21	FSM	ENSG00000055917.16	ENST00000361078.7	6309	21	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_20	115.238828091924	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20	True	NA	-10	True	AATAAA	-1	NA	20350844	20248736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
transcript_75643.known	chr2	-	510	1	FSM	ENSG00000279307.2	ENST00000624084.2	510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTATGGTCAAATCTT	NA	False	NA	NA	False	AATGAA	-4	NA	20529976	20529466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20529500_20530000
transcript_75645.known	chr2	-	2383	7	FSM	ENSG00000118960.13	ENST00000304031.8	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	3.76017139089283	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-13	True	NA	-34	True	AATAAA	-19	NA	20651098	20617817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
transcript_75647.nic	chr2	-	1111	7	NIC	ENSG00000118960.13	novel	518	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	13.3041346956501	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCTTTCACCCCTTCG	-28	True	NA	1	True	AATAAA	-26	NA	20651113	20622178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_20622320_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
transcript_75648.nic	chr2	-	2221	6	NIC	ENSG00000118960.13	novel	2383	7	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	16.2283702200806	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-17	True	NA	-34	True	AATAAA	-19	NA	20651102	20617817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20651031
transcript_75654.known	chr2	-	1375	3	FSM	ENSG00000118960.13	ENST00000406618.3	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	3	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAGAAGCAAAACTGG	1	True	NA	NA	False	AATAAA	-25	NA	20651084	20640024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20641181_20645339_20645506_20651031
transcript_7566.known	chr1	+	1078	3	FSM	ENSG00000122481.17	ENST00000263893.10	1078	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	97.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	2	True	NA	16	True	ATTAAA	-16	NA	95234210	95247223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95244210_95244716_95246755
transcript_75660.known	chr2	-	3807	6	FSM	ENSG00000118961.15	ENST00000541941.5	3807	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	56.9020210537376	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	NA	False	NA	1	True	TTTAAA	-24	NA	20823130	20684013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20823036
transcript_75663.known	chr2	-	3917	7	FSM	ENSG00000118961.15	ENST00000237822.8	3917	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	24.1367631080336	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTATCTCCTGCATCC	-13	True	NA	-16	True	TTTAAA	-7	NA	20823101	20684030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_75664.nnic	chr2	+	432	3	NNC	ENSG00000233005.2	novel	488	6	NA	NA	469812	-162983	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTTTATTTTAAAAAGTA	NA	False	NA	NA	False	AATAAA	-18	NA	21690996	21807976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_21691095_21799356_21799479_21807764
transcript_75665.nnic	chr2	+	533	2	NNC	ENSG00000233005.2	novel	642	3	NA	NA	29651	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAGACTTTCTATGAG	NA	False	NA	NA	False	AGTAAA	-16	NA	21250835	21264079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_21250982_21263692
transcript_75682.nnic	chr2	-	887	5	NNC	ENSG00000228999.4	novel	825	4	NA	NA	-158606	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	4.81534007106456	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTCTGGATTTATTAAA	0	True	NA	-46	True	NA	NA	NA	22694928	22517935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_22518435_22531035_22531106_22560297_22560362_22575632_22575723_22694764
transcript_75683.nnic	chr2	-	672	5	NNC	ENSG00000228999.4	novel	825	4	NA	NA	-158606	-12134	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5.44862367942584	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATTTACCTTTTCACC	0	True	NA	NA	False	AATAAA	-18	NA	22694928	22530069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_22530354_22531035_22531106_22560297_22560362_22575632_22575723_22694764
transcript_75687.nnic	chr2	-	598	3	NNC	ENSG00000228999.4	novel	2067	2	NA	NA	-72850	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAACCCTAGCAGTGTC	NA	False	NA	-42	True	AAAACA	-37	NA	22038530	21933235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_21933548_21934966_21935095_22038372
transcript_75688.nnic	chr2	-	410	3	NNC	ENSG00000228999.4	novel	636	5	NA	NA	-72762	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCCTTGGAACTGTCCC	NA	False	NA	-28	True	ATTAAA	-17	NA	22038442	21933335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_21933548_21934966_21935095_22038372
transcript_75689.nnic	chr2	-	477	2	NNC	ENSG00000228999.4	novel	1182	2	NA	NA	-72839	18	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGCGTGCTTCGTGCA	NA	False	NA	-24	True	AATAAA	-14	NA	22038519	21933217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_21933548_22038372
transcript_7569.nnic	chr1	+	577	3	NNC	ENSG00000122481.17	novel	1078	3	NA	NA	-61	5564	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	16	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGCTCCATGTTCAAT	-13	True	NA	7	True	AATAAA	-19	NA	95234148	95252789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_95234316_95246755_95246862_95252485
transcript_75690.nnic	chr2	-	359	2	NNC	ENSG00000228999.4	novel	636	5	NA	NA	-72839	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCCTTGGAACTGTCCC	NA	False	NA	-28	True	ATTAAA	-17	NA	22038519	21933335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_21933548_22038372
transcript_75692.known	chr2	+	457	1	FSM	ENSG00000238111.1	ENST00000421721.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCTACGTACTCAAGT	NA	False	NA	NA	False	NA	NA	NA	23900692	23901149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_23900700_23901100
transcript_75694.known	chr2	+	1557	8	FSM	ENSG00000173960.14	ENST00000404924.5	1557	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100.741333753979	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGACAGCAGGGATTTAT	-10	True	NA	NA	False	TATAAA	-39	NA	23927311	24000203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_23927616_23939539_23939663_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_75700.known	chr2	+	6022	7	FSM	ENSG00000173960.14	ENST00000309033.5	6022	7	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	44.3270672263448	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCCTTGTTATAAAATA	10	True	NA	20	True	ATTAAA	-17	NA	23940462	24004909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_23940649_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_75708.known	chr2	+	2195	8	FSM	ENSG00000173960.14	ENST00000446425.2	2195	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	105.376680997074	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCCTATTCCCTTTC	7	True	NA	3	True	AATAAA	-16	NA	23927284	24000820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_23927616_23958300_23958356_23968918_23969036_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_75710.known	chr2	+	1137	6	FSM	ENSG00000119782.14	ENST00000438630.5	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	253.656933672234	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	3	True	NA	14	True	AATAAA	-19	NA	24049730	24063681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24049887_24053901_24053950_24054103_24054193_24054472_24054541_24060813_24060927_24063018
transcript_75716.nic	chr2	+	1051	5	NIC	ENSG00000119782.14	novel	1137	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	111	junction_3	246.27360292975	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	15	True	NA	14	True	AATAAA	-19	NA	24049703	24063681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_24049887_24053901_24053950_24054103_24054193_24060813_24060927_24063063
transcript_7572.known	chr1	+	513	2	FSM	ENSG00000122481.17	ENST00000473397.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGTTTTCATGTTT	59	False	NA	13	True	ATTAAA	-13	NA	95234267	95247220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95246755
transcript_75720.known	chr2	+	953	5	FSM	ENSG00000119782.14	ENST00000452109.1	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	267.19316514462	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGACAAACTCCTGTCCA	43	False	NA	4	True	AATAAA	-9	NA	24049770	24063671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063063
transcript_75725.known	chr2	+	1010	4	FSM	ENSG00000119782.14	ENST00000380991.8	1010	4	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_3	184.645606500669	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	12	True	NA	14	True	AATAAA	-19	NA	24049700	24063681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063018
transcript_75726.known	chr2	+	925	4	FSM	ENSG00000119782.14	ENST00000380986.9	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	157.442758557586	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	13	True	NA	14	True	AATAAA	-19	NA	24049740	24063681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063063
transcript_7573.known	chr1	+	1068	2	FSM	ENSG00000122481.17	ENST00000460571.1	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	NA	False	NA	16	True	ATTAAA	-16	NA	95246057	95247223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95246658_95246755
transcript_75732.known	chr2	-	3848	4	FSM	ENSG00000163026.12	ENST00000295148.9	3848	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	26.0810701893581	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	0	True	NA	-15	True	AATAAA	-15	NA	24047391	24029346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24031163_24032828_24032947_24037676_24039513_24047313
transcript_75734.known	chr2	+	859	4	FSM	ENSG00000119782.14	ENST00000421839.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	117.047948389633	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	4183	False	NA	14	True	AATAAA	-19	NA	24053910	24063681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24053950_24054103_24054193_24060813_24060927_24063063
transcript_75735.known	chr2	-	3700	3	FSM	ENSG00000163026.12	ENST00000406895.3	3700	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	83	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	-7	True	NA	-15	True	AATAAA	-15	NA	24047361	24029346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24031163_24037676_24039513_24047313
transcript_75737.known	chr2	-	651	4	FSM	ENSG00000115128.7	ENST00000233468.5	651	4	0	0	0	0	multi-exon	FALSE	canonical	3	2344	junction_3	103.760407777833	7282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCAGTCTTTTCTCTTG	6	True	NA	-7	True	AATAAA	-20	NA	24076326	24067585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24067852_24068320_24068460_24074075_24074195_24076199
transcript_7574.known	chr1	+	826	2	FSM	ENSG00000228971.3	ENST00000440116.2	826	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGGAAACACATTGTGTG	NA	False	NA	NA	False	NA	NA	NA	95510115	95514729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95510363_95514150
transcript_75743.known	chr2	-	720	2	FSM	ENSG00000115128.7	ENST00000478050.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	2344	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGTATAAAAGTAACA	8823	False	24076392	NA	False	AATAAA	-7	NA	24076373	24073648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24074195_24076199
transcript_75744.known	chr2	+	1369	11	FSM	ENSG00000219626.9	ENST00000615575.5	1369	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	7.69675256195754	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGTCCATCTCTGTAT	0	True	NA	5	True	AATAAA	-20	NA	24123468	24169638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24123534_24124329_24124461_24135118_24135188_24137908_24138101_24139369_24139451_24146747_24146836_24146929_24147087_24161505_24161614_24164197_24164336_24167626_24167684_24169355
transcript_7576.nnic	chr1	-	2692	3	Genic_Genomic	ENSG00000137970.7	novel	747	1	NA	NA	-21	232008	multi-exon	FALSE	non_canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGTTCATTTCACATA	-4	True	NA	NA	False	AAAAAG	-2	NA	96679641	96446865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_96448620_96599388_96599481_96678795
transcript_75776.known	chr2	-	1393	5	FSM	ENSG00000176732.7	ENST00000313213.5	1393	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.4790199457749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGATAATCTGGACCATA	-6	True	NA	NA	False	ACTAAA	-43	NA	24123334	24114808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24115612_24119576_24119683_24121162_24121301_24122418_24122548_24123117
transcript_7578.nnic	chr1	-	966	2	Genic_Genomic	ENSG00000137970.7	novel	747	1	NA	NA	-12991	76	multi-exon	FALSE	canonical	0	0	junction_1	0	70272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGGACA	NA	False	NA	NA	False	AATAAA	-34	NA	96692611	96678797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_96679670_96692517
transcript_7579.known	chr1	-	747	1	FSM	ENSG00000137970.7	ENST00000468715.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2991	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTATTT	17	False	NA	NA	False	AATGAA	-5	NA	96679620	96678873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_96678900_96679600
transcript_75797.known	chr2	-	677	3	FSM	ENSG00000115129.14	ENST00000413037.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	1.5	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	21	True	NA	-3	True	AATAAA	-22	NA	24084311	24080745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24081032_24082884_24083153_24084188
transcript_75798.known	chr2	-	661	4	FSM	ENSG00000176732.7	ENST00000465360.1	661	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATAAGTGTTGGTCA	9	True	NA	NA	False	NA	NA	NA	24123319	24115396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24115612_24119576_24119683_24121162_24121301_24123117
transcript_75799.known	chr2	+	362	2	FSM	ENSG00000219626.9	ENST00000611138.1	362	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGTGTCCATCTCTGTA	6040	False	NA	4	True	AATAAA	-19	NA	24164255	24169637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24164336_24169355
transcript_7580.known	chr1	+	3153	14	FSM	ENSG00000117569.19	ENST00000426398.3	3153	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	38.6326960889425	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACACTTCTGTAGCT	3	True	NA	-16	True	NA	NA	NA	96721787	96814858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_96721897_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_75800.known	chr2	-	3634	4	FSM	ENSG00000198399.16	ENST00000416160.1	3634	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	7.87400787401181	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTATTGTGTATTTC	2608	False	NA	-2	True	ATTAAA	-16	NA	24248699	24238932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24242207_24246128_24246321_24246796_24246894_24248628
transcript_75803.known	chr2	+	4085	8	FSM	ENSG00000138092.11	ENST00000260662.2	4085	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	61.7341237956475	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	20	True	NA	25	True	AATAAA	-16	NA	24793461	24822373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_7581.known	chr1	+	3332	14	FSM	ENSG00000117569.19	ENST00000675735.1	3332	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	38.0791763125078	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAGATGCTGTGAAAATA	-8	True	NA	NA	False	CATAAA	-4	NA	96721776	96815029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_96721897_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804799_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_75811.known	chr2	+	4272	7	FSM	ENSG00000138092.11	ENST00000473706.5	4272	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	52.8130876035687	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTGGTGCTGGTGGTG	15	True	NA	28	True	AATAAA	-19	NA	24793144	24822376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24793502_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_7583.known	chr1	+	3888	14	FSM	ENSG00000117569.19	ENST00000676292.1	3888	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	43.4478535296206	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCCACACTTATGCAAAA	245	False	NA	NA	False	TATAAA	-2	NA	96722029	96815612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_96722108_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_75834.known	chr2	+	748	4	FSM	ENSG00000138092.11	ENST00000486527.6	748	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	71.8068396618471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTTACTGCTGGCTTG	3	True	NA	NA	False	NA	NA	NA	24793444	24814782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375
transcript_75842.known	chr2	-	865	3	FSM	ENSG00000184924.6	ENST00000480190.1	865	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTCAAATAGAAGATTT	26	True	NA	57	True	NA	NA	NA	24793053	24790204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24792383_24792585_24792766
transcript_75843.known	chr2	-	624	2	FSM	ENSG00000184924.6	ENST00000474668.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTCTTATTAATAAG	5	True	NA	-4	True	ATTAAA	-16	NA	24793074	24790265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24792766
transcript_75845.known	chr2	-	1014	2	FSM	ENSG00000184924.6	ENST00000487316.1	1014	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATAACTACTTCCTCTT	-11	True	NA	-13	True	ATTAAA	-7	NA	24793090	24790274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24792383
transcript_75846.known	chr2	-	1120	2	FSM	ENSG00000184924.6	ENST00000328379.6	1120	2	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_1	0	3075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTTGTCATTTCA	-1	True	NA	1	True	AATGAA	-18	NA	24793391	24789727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24793125
transcript_75847.known	chr2	-	4847	7	FSM	ENSG00000115137.12	ENST00000264711.7	4847	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.43650214343336	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGGTCTGTGGGCTGCAT	-16	True	NA	-6	True	AGTAAA	-14	NA	24971955	24943641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24947749_24951393_24951555_24957042_24957166_24957809_24957975_24963404_24963475_24967210_24967294_24971817
transcript_7585.known	chr1	+	3057	14	FSM	ENSG00000117569.19	ENST00000370197.5	3057	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	32.2642565158522	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	25	False	NA	9	True	ATTAAA	-19	NA	96721809	96814793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_75850.known	chr2	-	485	3	FSM	ENSG00000115137.12	ENST00000492985.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAATAATTACATT	243	False	NA	NA	False	NA	NA	NA	24971859	24963114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24963475_24967210_24967294_24971817
transcript_75851.known	chr2	+	255	2	FSM	ENSG00000224165.7	ENST00000421842.2	348	2	91	2	18	-2	multi-exon	FALSE	canonical	3	6	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTCAGTGAATAT	2	True	NA	10	True	AATAAA	-22	NA	24972182	24972830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24972233_24972625
transcript_75852.nnic	chr2	+	286	2	NNC	ENSG00000224165.7	novel	2403	4	NA	NA	0	6405	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATATCAACGTGGATCAA	-13	True	NA	NA	False	AATAAA	-28	NA	24972124	24979237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_24972233_24979059
transcript_75854.known	chr2	+	7486	23	FSM	ENSG00000084710.14	ENST00000403714.8	7486	23	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_5	5.2742944379492	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGTTTGATTT	-16	True	NA	6	True	AATAAA	-18	NA	25042075	25159135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_25042320_25091324_25091402_25093002_25093131_25103636_25103788_25121672_25121795_25128182_25128333_25129974_25130110_25130551_25130631_25131367_25131504_25131749_25131912_25132902_25133015_25133382_25133435_25135466_25135640_25136522_25136599_25137340_25137503_25139058_25139191_25141365_25141434_25143734_25143863_25144959_25145052_25149693_25149743_25151913_25152021_25153711_25153762_25154234
transcript_7586.known	chr1	+	3054	14	FSM	ENSG00000117569.19	ENST00000370198.5	3054	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	31.4578707660912	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	25	False	NA	9	True	ATTAAA	-19	NA	96721809	96814793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_75861.known	chr2	-	3589	19	FSM	ENSG00000119772.19	ENST00000380746.8	3589	19	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_17	114.816224603053	2029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	878	False	NA	-22	True	AATAAA	-18	NA	25252311	25232975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249656_25249725_25252193
transcript_75865.known	chr2	-	3585	18	FSM	ENSG00000119772.19	ENST00000683760.1	3585	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_17	102.150543630535	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCACCTGGAGCAAATA	1057	False	NA	-61	True	NA	NA	NA	25252132	25233014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25251911
transcript_75866.known	chr2	-	2300	18	FSM	ENSG00000119772.19	ENST00000402667.1	2300	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_17	69.0315107828943	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGATGGAGAGAAGTAT	878	False	NA	-42	True	AATAAA	-12	NA	25252311	25234196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25252193
transcript_7587.known	chr1	-	4423	23	FSM	ENSG00000188641.14	ENST00000370192.8	4423	23	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_15	4.07775663491015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTCTTTTGCTGCCTCA	26	False	97921046	0	True	AATAAA	-21	NA	97921034	97077742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_97079147_97082329_97082471_97098488_97098633_97193068_97193249_97234851_97234995_97305258_97305379_97306176_97306298_97373560_97373645_97382392_97382462_97450058_97450224_97515725_97515942_97549559_97549745_97573759_97573971_97593217_97593388_97595058_97595167_97679094_97679183_97691716_97691799_97699350_97699548_97721509_97721672_97740391_97740480_97828113_97828197_97883263_97883375_97920883
transcript_75879.known	chr2	-	1775	4	FSM	ENSG00000119772.19	ENST00000406659.3	1775	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	20.0720922897661	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAAGCTTTTATTCATT	NA	False	NA	-2	True	AATACA	-15	NA	25342590	25281451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25282712_25300138_25300244_25313912_25314162_25342429
transcript_75882.known	chr2	-	2464	20	FSM	ENSG00000138101.20	ENST00000288642.12	2464	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	80.3763998383203	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTGTGTGTTTGTGA	NA	False	NA	-19	True	AAAAAG	-5	NA	25673647	25377244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_75884.known	chr2	-	2420	20	FSM	ENSG00000138101.20	ENST00000407661.7	2420	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.3468287740663	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	NA	False	NA	-17	True	AAAAAG	-7	NA	25673634	25377242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25419514_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_75890.nnic	chr2	-	1266	9	NNC	ENSG00000138101.20	novel	1002	6	NA	NA	-5	18327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	116.232996068242	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTATATCTTCATTT	12	True	NA	0	True	AATAAA	-19	NA	25673555	25558188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_25558408_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_75896.nic	chr2	-	1102	7	ISM	ENSG00000143970.18	ENST00000336112.9	8886	12	-85	29890	-64	1180	5prime_fragment	FALSE	canonical	1	9	junction_5	9.04464236747676	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGCTTACAAAGACT	43	False	NA	0	True	NA	NA	NA	25878551	25767581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_25767727_25768741_25768869_25771439_25771541_25799384_25799536_25806228_25806338_25845480_25845564_25878165
transcript_75898.nic	chr2	-	777	4	ISM	ENSG00000143970.18	ENST00000336112.9	8886	12	-85	61645	-64	-30575	5prime_fragment	FALSE	canonical	1	9	junction_2	7.40870359029762	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTGTTAGTAGTTCCT	43	False	NA	NA	False	AATAAA	-23	NA	25878551	25799336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_25799536_25806228_25806338_25845480_25845564_25878165
transcript_75899.known	chr2	-	8886	12	FSM	ENSG00000143970.18	ENST00000336112.9	8886	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	8.75752333003076	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTTGGAGTT	3	True	NA	-30	True	ATTAAA	-5	NA	25878466	25737691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25744477_25749695_25750414_25753533_25753640_25756017_25756115_25759481_25759646_25767582_25767727_25768741_25768869_25771439_25771541_25799384_25799536_25806228_25806338_25845480_25845564_25878165
transcript_759.known	chr1	-	485	5	FSM	ENSG00000131584.19	ENST00000479108.5	485	5	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_4	11.71537451386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTCAGAGGCAGACAGC	205	False	NA	NA	False	NA	NA	NA	1307830	1301855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1302047_1302921_1302976_1303161_1303282_1304085_1304144_1307768
transcript_75900.known	chr2	-	5342	8	FSM	ENSG00000084731.15	ENST00000264712.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	19.9550515316963	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTGCCTTACTTCTCT	-6	True	NA	-12	True	AATAAA	-21	NA	25982497	25926597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25929072_25929304_25929478_25929954_25930064_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
transcript_75901.known	chr2	-	730	4	FSM	ENSG00000084731.15	ENST00000475453.1	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	3.68178700572909	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGGGCCCACGTGCTGG	2096	False	NA	NA	False	AATAAA	-18	NA	25980622	25954130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25954386_25955540_25955664_25956342_25956445_25980372
transcript_7591.known	chr1	-	1779	6	FSM	ENSG00000188641.14	ENST00000306031.5	1779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.4027022093287	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAAGCTTTTTGTCCTTTT	-3	True	NA	NA	False	ATTAAA	-24	NA	97921049	97719757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_97720927_97721509_97721672_97740391_97740480_97828113_97828197_97883263_97883375_97920883
transcript_75911.known	chr2	+	3561	6	FSM	ENSG00000084733.11	ENST00000264710.5	3561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1242	junction_3	92.2726394983909	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGGTTTGGTTTTCA	-32	True	NA	16	True	TATAAA	-19	NA	26034083	26137454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26034736_26098661_26098723_26109767_26109907_26127143_26127234_26127849_26127952_26134937
transcript_75917.known	chr2	+	1292	5	FSM	ENSG00000084733.11	ENST00000495146.5	1292	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	585.214650790631	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTATAAGAATAAAGTT	-9	True	NA	-21	True	ATTAAA	-33	NA	26034106	26135347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26034736_26098661_26098723_26127143_26127234_26127849_26127952_26134937
transcript_75918.nic	chr2	+	1429	3	ISM	ENSG00000084733.11	ENST00000264710.5	3561	6	-131	27102	-131	-24684	5prime_fragment	FALSE	canonical	3	1410	junction_1	49	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTAATGTTGTTATTT	176	False	NA	NA	False	NA	NA	NA	26033952	26110352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_26034736_26098661_26098723_26109767
transcript_75919.nnic	chr2	+	931	2	NNC	ENSG00000084733.11	novel	1292	5	NA	NA	-16	-41183	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTATGAAAAATTTACTA	291	False	NA	9	True	AATAAA	-21	NA	26034067	26093853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_26034736_26093590
transcript_75930.known	chr2	+	1997	16	FSM	ENSG00000138029.14	ENST00000317799.10	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	46.4492076239077	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	17	True	NA	24	True	AATAAA	-17	NA	26244938	26290465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_75946.known	chr2	+	2142	15	FSM	ENSG00000138029.14	ENST00000537713.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	120.003571375427	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	0	True	NA	23	True	AATAAA	-16	NA	26244747	26290464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_75951.known	chr2	+	1588	14	FSM	ENSG00000138029.14	ENST00000405867.7	1588	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	123.570261258345	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAGATACATAAATATGG	4	True	NA	-29	True	TATAAA	-5	NA	26244925	26290412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_75962.known	chr2	+	670	3	FSM	ENSG00000138029.14	ENST00000479347.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATGAAATGAAAGAGTAA	-2	True	NA	NA	False	AATAGA	-41	NA	26244919	26254956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26244991_26254246_26254319_26254429
transcript_75964.known	chr2	-	2943	20	FSM	ENSG00000084754.12	ENST00000380649.8	2943	20	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_11	89.5872653692671	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCATTGTGTGATCTT	-11	True	NA	-20	True	ATTAAA	-20	NA	26244632	26190634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_75965.known	chr2	-	2688	20	FSM	ENSG00000084754.12	ENST00000643233.1	2688	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	232.481709285601	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTCTGTGTCAGCA	-5	True	NA	-38	True	AATAAA	-1	NA	26244626	26190888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244524
transcript_75966.known	chr2	-	2576	19	FSM	ENSG00000084754.12	ENST00000645274.1	2576	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	322.718009383187	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCAGCATCTTTGCC	5	True	NA	-30	True	AATAAA	-9	NA	26244616	26190880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214577_26215052_26215176_26230191_26230295_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_75967.known	chr2	-	2748	21	FSM	ENSG00000084754.12	ENST00000643063.1	2748	21	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	304.692894567629	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCTGCACCCAGCCAAAC	17	True	NA	-71	True	NA	NA	NA	26244604	26190921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26210694_26210815_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_75970.nnic	chr2	+	770	4	Fusion	ENSG00000286707.1_ENSG00000138018.19	novel	2567	2	NA	NA	-120	2912	multi-exon	FALSE	canonical	0	0	junction_2	9.53356643071673	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCAGAGAAACCAAGTCA	NA	False	NA	NA	False	ATTAAA	-23	NA	26298449	26309252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_26298627_26303830_26304129_26308550_26308658_26309064
transcript_75972.known	chr2	+	2567	2	FSM	ENSG00000286707.1	ENST00000653720.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAAATAATTCCTCCT	NA	False	NA	-11	True	TTTAAA	-30	NA	26298569	26306340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26298627_26303830
transcript_75973.known	chr2	+	2717	2	FSM	ENSG00000286707.1	ENST00000661577.1	2717	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATCTAAATAATTAAATAA	NA	False	NA	-19	True	TTTAAA	-22	NA	26299913	26306332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26300129_26303830
transcript_75976.known	chr2	+	8066	10	FSM	ENSG00000138018.19	ENST00000260585.12	8066	10	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_7	14.5983256269721	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGATTGTCTTCT	15	True	NA	24	True	AATAAA	-31	NA	26346142	26395885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039_26375149_26383298_26383348_26384958_26385140_26386353_26386537_26389004
transcript_75984.nic	chr2	+	1814	6	ISM	ENSG00000138018.19	ENST00000260585.12	8066	10	-86	19781	-86	2598	5prime_fragment	FALSE	canonical	3	100	junction_3	14.6205335059977	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATAAATAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	26346056	26376104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039
transcript_75987.nnic	chr2	+	581	3	Fusion	ENSG00000286707.1_ENSG00000138018.19	novel	2567	2	NA	NA	-233	2908	multi-exon	FALSE	canonical	3	8	junction_2	0.5	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTTTCAGAGAAACCAA	NA	False	NA	NA	False	ATTAAA	-19	NA	26298336	26309248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_26298627_26308550_26308658_26309064
transcript_75989.known	chr2	-	292	1	FSM	ENSG00000225024.1	ENST00000418887.1	292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCAATGATTAGTCAT	7991	False	NA	NA	False	NA	NA	NA	26678510	26678218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_26678200_26678500
transcript_75990.nnic	chr2	+	1285	7	NNC	ENSG00000213699.9	novel	3902	6	NA	NA	-27	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_6	8.89600409672168	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATCCATTCTCGA	-36	True	NA	14	True	AAAAAG	-18	NA	26764256	26781147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_26764427_26774250_26774324_26775043_26775216_26775463_26775677_26776371_26776483_26778041_26778161_26780720
transcript_75991.known	chr2	+	3902	6	FSM	ENSG00000213699.9	ENST00000344420.10	3902	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	2.60768096208106	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTTCTGCAGGCTATA	-9	True	NA	30	True	TATAAA	-20	NA	26764283	26781231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26764427_26774250_26774324_26775043_26775216_26775463_26775677_26776371_26776483_26778041
transcript_75993.nic	chr2	+	722	6	NIC	ENSG00000115163.15	novel	689	5	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	219.193430558491	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTGTGCACTTTT	6109	False	NA	NA	False	AATAAA	-30	NA	26785949	26801067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_26786081_26792130_26792241_26792755_26792834_26793144_26793327_26793811_26793894_26800928
transcript_75995.known	chr2	+	3605	5	FSM	ENSG00000213699.9	ENST00000414029.1	3605	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	9.93415824315276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATCCATTCTCGA	32	True	NA	14	True	AAAAAG	-18	NA	26764324	26781147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26764427_26774250_26774324_26775463_26775677_26776371_26776483_26778041
transcript_75997.known	chr2	+	689	5	FSM	ENSG00000115163.15	ENST00000472719.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	209.72064752904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTTGAAAACATCAGAT	-34	True	NA	38	True	NA	NA	NA	26786026	26794076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26786081_26792130_26792241_26792755_26792834_26793144_26793327_26793811
transcript_75999.nic	chr2	+	1125	4	NIC	ENSG00000115163.15	novel	1299	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	244.365845949606	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTTACTGTTACAGCAT	-35	True	NA	11	True	AATAAA	-22	NA	26786025	26794589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_26786081_26792130_26792241_26793144_26793327_26793811
transcript_7600.nic	chr1	+	1785	10	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	174.401056175305	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	35	False	NA	13	True	AATAAA	-15	NA	98661791	98760500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_76001.nic	chr2	+	1462	10	ISM	ENSG00000157851.17	ENST00000401478.5	1972	13	78979	0	-11191	0	3prime_fragment	FALSE	canonical	3	50	junction_8	5.41830459566072	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTGTAGTCCTTTCT	NA	False	NA	4	True	NA	NA	NA	26927267	26947197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_26927433_26928254_26928324_26931639_26931685_26933257_26933334_26934577_26934735_26940030_26940173_26941949_26942093_26942542_26942751_26944655_26944825_26946909
transcript_76002.nic	chr2	+	1053	2	ISM	ENSG00000084764.12	ENST00000648289.1	1281	8	11143	-766	11098	0	3prime_fragment	FALSE	canonical	3	67	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCATGTGTCCCTCAAC	2563	False	NA	10	True	AATAAA	-18	NA	27025896	27027196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_27026033_27026279
transcript_76003.known	chr2	+	2978	17	FSM	ENSG00000119777.20	ENST00000238788.14	2978	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	81.2095091414792	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	-10	True	NA	21	True	AATAAA	-21	NA	27032964	27041694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_76006.known	chr2	+	2700	18	FSM	ENSG00000119777.20	ENST00000321326.11	2700	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	105.605127274079	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	-21	True	NA	21	True	AATAAA	-21	NA	27032953	27041694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710_27040955_27041243
transcript_76007.known	chr2	+	3188	15	FSM	ENSG00000084693.16	ENST00000360131.5	3188	15	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	137.658572755427	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	11	True	NA	15	True	AATAAA	-16	NA	27051667	27070618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069572_27069707_27070091
transcript_76012.known	chr2	+	2382	11	FSM	ENSG00000084693.16	ENST00000323064.12	2382	11	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_7	31.8684797252709	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTCTCCTACGAC	21	False	NA	26	True	AATAAA	-18	NA	27051677	27059535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189
transcript_76015.known	chr2	+	1850	7	FSM	ENSG00000084693.16	ENST00000489683.5	1850	7	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_5	29.3995464817628	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTCAAACTGAGAATT	24	False	NA	NA	False	AAAAAG	-23	NA	27051680	27056464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681
transcript_76019.known	chr2	+	3261	16	FSM	ENSG00000084693.16	ENST00000487078.5	3261	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	153.191586656129	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTAGTTGCTTTGTATGT	-11	True	NA	19	True	AATAAA	-20	NA	27051645	27070622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069047_27069095_27069572_27069707_27070091
transcript_76020.known	chr2	-	442	3	FSM	ENSG00000228474.6	ENST00000456793.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	3781	junction_2	477.5	34847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-1	True	NA	-1	True	TATAAA	-30	NA	27071654	27070471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27070722_27071325_27071464_27071600
transcript_76021.known	chr2	-	458	3	FSM	ENSG00000228474.6	ENST00000447619.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1888.5	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	4	True	NA	-1	True	TATAAA	-30	NA	27071649	27070471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27070743_27071325_27071464_27071600
transcript_76022.known	chr2	-	559	2	FSM	ENSG00000228474.6	ENST00000429985.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	4736	junction_1	0	1622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGTCCCAAAATCTTG	4	True	NA	-16	True	TATAAA	-15	NA	27071649	27070486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27070722_27071325
transcript_76023.known	chr2	+	2411	8	FSM	ENSG00000138030.13	ENST00000260599.10	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	62.434945735378	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTACAAGGCTCT	-25	True	NA	19	True	TATAAA	-16	NA	27086746	27100751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27087352_27092331_27092449_27094476_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_76024.nnic	chr2	+	1506	7	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	34	junction_2	59.713203453396	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	3080	False	NA	8	True	AATAAA	-16	NA	27086734	27099969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_27087352_27092331_27092449_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_7603.known	chr1	+	1736	9	FSM	ENSG00000162627.17	ENST00000306121.8	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_7	38.4407010862185	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	-1	True	NA	13	True	AATAAA	-15	NA	98661720	98760500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_76030.nnic	chr2	+	897	6	NNC	ENSG00000138030.13	novel	2411	8	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	76.0420936061074	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	3080	False	NA	8	True	AATAAA	-16	NA	27086734	27099969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_27086860_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_76031.nnic	chr2	+	1389	6	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	90	junction_1	40.5265345175232	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	3080	False	NA	8	True	AATAAA	-16	NA	27086734	27099969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_27087352_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_76039.known	chr2	-	1177	7	NNC	ENSG00000138028.17	novel	1610	7	NA	NA	-5	34	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	9.15453742990631	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCCCGGCCACCTCTCT	216	False	NA	-2	True	AATAAA	-16	NA	27118910	27101078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27101462_27101512_27101889_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27118845
transcript_76040.nnic	chr2	-	1943	10	NNC	ENSG00000138073.14	novel	2127	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	156.861895694868	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCCAAATGGTACTCTTG	4781	False	NA	-13	True	AATAAA	-20	NA	27134675	27130764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286_27134362_27134575
transcript_76043.known	chr2	-	2230	18	FSM	ENSG00000138074.15	ENST00000408041.5	2230	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	297.885837727038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGACTCAGGACCCCGCC	-2	True	NA	NA	False	NA	NA	NA	27211752	27200435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27208613_27208687_27211466_27211534_27211710
transcript_76053.known	chr2	-	3213	17	FSM	ENSG00000138074.15	ENST00000310574.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_16	179.26402272556	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	17	True	NA	-1	True	AATAAA	-21	NA	27212268	27199586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
transcript_7607.known	chr1	+	1562	9	FSM	ENSG00000162627.17	ENST00000528824.1	1562	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	199.140496885993	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	18	True	NA	13	True	AATAAA	-15	NA	98661861	98760500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
transcript_76091.known	chr2	+	1059	7	FSM	ENSG00000138085.18	ENST00000405489.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	625.831557920251	1635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGCGCCCTGCCTTTA	23	True	NA	49	True	AATAAA	-37	NA	27212369	27217178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27212608_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_76092.known	chr2	-	732	4	FSM	ENSG00000138074.15	ENST00000401463.5	732	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	370.125504239966	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCATCTTTCAGATGGTA	-9	True	NA	NA	False	AATAAA	-26	NA	27211793	27206893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27206943_27207257_27207791_27211466_27211534_27211710
transcript_7610.nic	chr1	+	1540	8	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	43	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_7	138.895350416589	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	7	False	NA	13	True	AATAAA	-15	NA	98661763	98760500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
transcript_76101.known	chr2	-	2936	8	FSM	ENSG00000115194.11	ENST00000233535.9	2936	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	15.0400825008593	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	-3	True	NA	NA	False	NA	NA	NA	27263047	27253683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27257904_27258059_27258160_27258308_27258752_27258935_27262811
transcript_76103.nnic	chr2	-	760	3	NNC	ENSG00000115194.11	novel	899	6	NA	NA	-998	-5541	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGCAGACTGGGCTCG	NA	False	NA	NA	False	AATAAA	-22	NA	27265134	27263580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27263883_27264009_27264083_27264749
transcript_76104.known	chr2	+	2027	10	FSM	ENSG00000138100.14	ENST00000296098.4	2027	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.5179259164441	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCTGGTGGCTCTGCCC	33	False	NA	13	True	ATTAAA	-18	NA	27282461	27307439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27299529_27299656_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_76108.known	chr2	+	1930	9	FSM	ENSG00000138100.14	ENST00000380075.7	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	6.74073438135638	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTGCCCTGGTGGCTCT	0	True	NA	9	True	ATTAAA	-14	NA	27282428	27307435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_7612.known	chr1	+	1589	8	FSM	ENSG00000162627.17	ENST00000529992.5	1589	8	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	162.733662460965	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTGGCTGCAGTGTA	14	True	NA	11	True	AATAAA	-13	NA	98661700	98760498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_76140.known	chr2	-	1002	8	FSM	ENSG00000115204.15	ENST00000380044.6	1002	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_7	77.7741366170696	3321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-4	True	NA	-5	True	ATTAAA	-15	NA	27323097	27309491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_76141.known	chr2	-	905	8	FSM	ENSG00000115204.15	ENST00000426513.6	905	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	153.00366808995	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATATGGTGCCTCAGTA	10	True	NA	-53	True	NA	NA	NA	27323083	27309539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_76142.known	chr2	-	906	7	FSM	ENSG00000115204.15	ENST00000402310.5	906	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	168.391821522174	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-18	True	NA	-5	True	ATTAAA	-15	NA	27323054	27309491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_76143.known	chr2	-	827	6	FSM	ENSG00000115204.15	ENST00000402722.5	827	6	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_1	202.087505798849	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCAGTAAATATGTTAT	12	True	NA	-43	True	NA	NA	NA	27323081	27309529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_76144.known	chr2	-	998	7	FSM	ENSG00000115204.15	ENST00000233545.6	998	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_6	56.2820279189251	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	529	False	NA	-5	True	ATTAAA	-15	NA	27322564	27309491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447
transcript_76145.known	chr2	-	665	8	FSM	ENSG00000115204.15	ENST00000403262.6	665	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	161.17552860285	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGGCACTGAAGATGT	26	False	NA	NA	False	AATAAA	-27	NA	27323067	27311494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27311678_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_76146.known	chr2	-	749	4	FSM	ENSG00000115204.15	ENST00000399052.8	749	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	125.661803619433	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGGCACCTGCAATCC	-4	True	NA	NA	False	AATACA	-18	NA	27323097	27315715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27316187_27317077_27317235_27322447_27322523_27323051
transcript_76151.known	chr2	-	3882	19	FSM	ENSG00000115207.14	ENST00000264720.7	3882	19	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_18	57.5627676734035	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27	True	NA	-7	True	ATTAAA	-24	NA	27357034	27325848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_76157.known	chr2	-	1771	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	15	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	246.92005749412	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGCAACTCTGCTGC	143	False	NA	-12	True	AATAAA	-14	NA	27370300	27364362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367803_27367804_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370105
transcript_76169.known	chr2	+	399	3	FSM	ENSG00000234072.1	ENST00000412749.1	399	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAAAAAAGTCTTTAAA	24	True	NA	NA	False	NA	NA	NA	27357187	27367622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27357293_27357807_27357903_27367423
transcript_76173.known	chr2	-	592	3	FSM	ENSG00000115207.14	ENST00000431028.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	213.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATCTGCATGAAGGCTC	7321	False	NA	4	True	NA	NA	NA	27328089	27326292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27326724_27327176_27327285_27328036
transcript_76174.known	chr2	-	1644	13	FSM	ENSG00000115211.17	ENST00000347454.9	1644	13	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_10	99.4915895384574	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-5	True	NA	-1	True	AATAAA	-25	NA	27370338	27364351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_76175.known	chr2	-	1858	12	NNC	ENSG00000115207.14	novel	604	4	NA	NA	-5373	2023	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	132.639136365809	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGCTTGTTTTTTGGT	NA	False	NA	-7	True	AATAAA	-32	NA	27343632	27333604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27333648_27333649_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307
transcript_76176.known	chr2	-	1754	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-119	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	249.249215841561	397	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	9968	False	NA	-1	True	AATAAA	-25	NA	27370457	27364351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369546_27369875_27369892_27369893_27369920_27370283
transcript_76177.known	chr2	-	1949	12	FSM	ENSG00000115211.17	ENST00000493344.6	1949	12	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_10	103.894892850085	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGAAACACAGGGTTAAT	7	True	NA	-48	True	NA	NA	NA	27370326	27364398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875
transcript_76178.known	chr2	-	1570	13	FSM	ENSG00000115211.17	ENST00000405940.6	1570	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	197.325168750016	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCATACTCCCTACCCTC	18	True	NA	-26	True	NA	NA	NA	27370315	27364376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368114_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_76179.known	chr2	-	1608	13	FSM	ENSG00000115211.17	ENST00000445933.6	1608	13	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_10	122.070562471966	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCCATACTCCCTAC	-1	True	NA	-30	True	NA	NA	NA	27370334	27364380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369550_27369875_27369920_27370283
transcript_76180.known	chr2	+	2400	14	FSM	ENSG00000115234.11	ENST00000537606.5	2400	14	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	265.551140618947	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACCTAGTTCAGGATGA	NA	False	NA	NA	False	TATAAA	-12	NA	27370495	27377533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27370807_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_76184.known	chr2	-	2144	4	FSM	ENSG00000163795.14	ENST00000323703.11	2144	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	14.7044966667418	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-2	True	NA	-42	True	AATAAA	-16	NA	27380734	27377234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27378372_27378466_27379055_27380092_27380249_27380471
transcript_76187.known	chr2	-	2077	3	FSM	ENSG00000163795.14	ENST00000407879.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	14.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	5830	False	NA	-42	True	AATAAA	-16	NA	27380444	27377234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27378372_27378466_27379055_27380092
transcript_76188.known	chr2	+	2357	15	FSM	ENSG00000115234.11	ENST00000233575.7	2357	15	0	0	0	0	multi-exon	FALSE	canonical	3	955	junction_3	55.1195824308107	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTAGTTCAGGATGAGT	1	True	NA	NA	False	TATAAA	-14	NA	27370615	27377535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_76189.known	chr2	+	2007	16	FSM	ENSG00000115234.11	ENST00000427123.5	2007	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	346.180659322396	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTACCTCTGGTTCCCTCT	13	True	NA	16	True	ATTAAA	-16	NA	27370627	27377123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373039_27373114_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_7619.known	chr1	+	253	3	FSM	ENSG00000162627.17	ENST00000473868.5	253	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	21.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTGTTGCCAATTGAAAT	53	False	NA	NA	False	NA	NA	NA	98661809	98677331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_98661912_98662696_98662817_98677300
transcript_76190.known	chr2	-	2210	10	FSM	ENSG00000115241.11	ENST00000344034.5	2210	10	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_9	51.867590204098	3937	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTACGCATCGTGTCCTTT	-20	True	NA	-8	True	ACTAAA	-14	NA	27409591	27381198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27381806_27382125_27382229_27382475_27382606_27383365_27383601_27383951_27384093_27384672_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
transcript_76196.known	chr2	+	2176	18	FSM	ENSG00000115216.14	ENST00000379852.8	2176	18	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_1	290.169679509377	2271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	5	True	NA	31	True	AATAAA	-20	NA	27428630	27442259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_76217.known	chr2	+	2887	19	FSM	ENSG00000115216.14	ENST00000233557.7	2887	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	334.094764592915	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	NA	False	NA	31	True	AATAAA	-20	NA	27427789	27442259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27428183_27428317_27428732_27433248_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_76219.known	chr2	+	2174	19	FSM	ENSG00000115216.14	ENST00000379863.7	2174	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	509.815895116639	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGTGTGTTCGCG	-10	True	NA	27	True	AATAAA	-16	NA	27428652	27442255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27435722_27435747_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_76220.known	chr2	-	1832	16	FSM	ENSG00000138002.16	ENST00000511842.5	1832	16	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	8.38888153053393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGCAAATAAAGCTTA	13	True	NA	-48	True	NA	NA	NA	27489678	27470812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27471096_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_76221.known	chr2	-	2207	15	FSM	ENSG00000138002.16	ENST00000359466.10	2207	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	5.46230122694433	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTCTCTTACTATTC	-5	True	NA	NA	False	NA	NA	NA	27489773	27471686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_76226.nic	chr2	+	720	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	199.645085088514	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	144	False	NA	20	True	AATAAA	-21	NA	27442347	27444297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_76227.known	chr2	+	665	6	FSM	ENSG00000157992.12	ENST00000453171.5	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	210.084364006463	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	5	True	NA	18	True	AATAAA	-19	NA	27442397	27444295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_76237.nic	chr2	+	981	6	NIC	ENSG00000157992.12	novel	872	7	NA	NA	12	0	intron_retention	FALSE	canonical	3	197	junction_5	136.181643403213	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	17	True	NA	20	True	AATAAA	-21	NA	27442409	27444297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_76238.known	chr2	+	942	6	FSM	ENSG00000157992.12	ENST00000407293.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	155.519002054411	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	2	True	NA	20	True	AATAAA	-21	NA	27442445	27444297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_7624.known	chr1	+	2334	8	FSM	ENSG00000099260.12	ENST00000263174.9	2334	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.989743318610787	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCACTTCAGTTGGTTTG	-8	True	NA	NA	False	AATAAA	-19	NA	99646112	99694535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_99646363_99662318_99662400_99667641_99667767_99686675_99686791_99686929_99686964_99687075_99687190_99688774_99689873_99694018
transcript_76246.nic	chr2	+	838	5	ISM	ENSG00000157992.12	ENST00000453171.5	665	6	-50	4	-18	0	intron_retention	FALSE	canonical	3	64	junction_1	203.311337608113	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	144	False	NA	14	True	AATAAA	-15	NA	27442347	27444291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_76254.nic	chr2	+	1099	5	ISM	ENSG00000157992.12	ENST00000407293.5	942	6	-36	6	12	0	intron_retention	FALSE	canonical	3	363	junction_1	86.1259978171516	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	17	True	NA	14	True	AATAAA	-15	NA	27442409	27444291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_7626.nic	chr1	-	721	5	ISM	ENSG00000156869.14	ENST00000646001.2	6971	17	-2	38052	-2	5573	5prime_fragment	FALSE	canonical	1	2	junction_4	1.29903810567666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTACAACTCTGTAACTA	-6	True	NA	NA	False	AAAAAG	-9	NA	99766637	99742021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_99742274_99747293_99747431_99748572_99748769_99748896_99749002_99766606
transcript_76276.known	chr2	-	690	6	FSM	ENSG00000138002.16	ENST00000443889.1	690	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19.9739830779942	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCTGAGTAAAGACTAAAG	241	False	NA	NA	False	AATAAA	-18	NA	27454636	27453136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27453271_27453383_27453514_27453629_27453740_27453981_27454163_27454353_27454419_27454566
transcript_76277.known	chr2	+	872	7	FSM	ENSG00000157992.12	ENST00000288873.7	872	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_6	134.195131556004	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	-12	True	NA	20	True	AATAAA	-21	NA	27442380	27444297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_76278.known	chr2	+	956	7	FSM	ENSG00000157992.12	ENST00000543753.5	956	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	189.885052948707	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTGGGTCTTAGTTT	-27	True	NA	14	True	ATTAAA	-18	NA	27442365	27446481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27446300
transcript_76279.known	chr2	+	724	5	FSM	ENSG00000157992.12	ENST00000464699.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	148.689903826723	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	301	False	NA	20	True	AATAAA	-21	NA	27442744	27444297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_7628.known	chr1	-	6971	17	FSM	ENSG00000156869.14	ENST00000646001.2	6971	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5090870584562	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACTATTGTATTAATATGA	-4	True	NA	-4	True	AATAAA	-18	NA	99766635	99703969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_99709121_99709197_99709260_99710805_99710950_99712104_99712164_99712417_99712516_99715585_99715673_99717409_99717526_99719533_99719648_99728492_99728641_99729649_99729749_99738085_99738269_99740792_99740941_99742178_99742274_99747293_99747431_99748572_99748769_99748896_99749002_99766606
transcript_76280.known	chr2	+	505	3	FSM	ENSG00000157992.12	ENST00000494572.1	505	3	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	55.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	810	False	NA	14	True	AATAAA	-15	NA	27443253	27444291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27443281_27443397_27443533_27443948
transcript_76281.known	chr2	+	397	2	FSM	ENSG00000235267.1	ENST00000417130.1	397	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGTAATACATATTTACA	NA	False	NA	NA	False	NA	NA	NA	27455155	27455862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27455424_27455733
transcript_76282.known	chr2	-	1612	7	FSM	ENSG00000115226.10	ENST00000264703.4	1612	7	0	0	0	0	multi-exon	TRUE	canonical	3	217	junction_1	25.0715642378638	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTGTATAGTATGCTG	22	True	NA	-4	True	AATAAA	-20	NA	27495200	27491882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27492479_27492665_27492791_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
transcript_7629.known	chr1	+	7446	34	FSM	ENSG00000162688.17	ENST00000294724.8	7446	34	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_1	39.4065480987342	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	-2	True	NA	16	True	AATAAA	-18	NA	99850488	99924020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_99850899_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
transcript_76291.known	chr2	+	2189	19	FSM	ENSG00000084734.9	ENST00000264717.7	2189	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.14530711822713	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACCTTTCAAAGTCAGT	-5	True	NA	NA	False	AATAAA	-23	NA	27496838	27523684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27496965_27497243_27497400_27497561_27497631_27498254_27498324_27498723_27498798_27499141_27499209_27499396_27499451_27501134_27501230_27503513_27503620_27505717_27505837_27506480_27506580_27506787_27506886_27507234_27507312_27507680_27507778_27507976_27508075_27508167_27508252_27518787_27518938_27522459_27522595_27523268
transcript_76293.known	chr2	+	3531	14	FSM	ENSG00000243943.10	ENST00000355467.6	3531	14	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	54.4706641637301	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGGTTCATGAATTAT	-15	True	NA	143	True	AATAAA	-25	NA	27583041	27623217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27583143_27583657_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_76294.known	chr2	+	3417	14	FSM	ENSG00000243943.10	ENST00000379717.5	3417	14	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	75.9590359860431	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCAGTGTTCTTTG	-27	True	NA	20	True	AATAAA	-14	NA	27583029	27623094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27583143_27583657_27583717_27598069_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_76297.known	chr2	+	2445	14	FSM	ENSG00000198522.14	ENST00000610189.2	2445	14	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_11	54.1552665897628	1623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTAATGTTCTATAC	9	True	NA	10	True	AATAAA	-20	NA	27629049	27651511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27629170_27629858_27629953_27631026_27631067_27631833_27631901_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_76298.known	chr2	+	3543	13	FSM	ENSG00000243943.10	ENST00000556601.5	3543	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	54.1515363483705	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGGTTCATGAATT	NA	False	NA	141	True	AATAAA	-23	NA	27582968	27623215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27583143_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_76321.known	chr2	-	4296	6	FSM	ENSG00000119760.16	ENST00000337768.10	4296	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	32.4012345443812	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTCTGATTCATTAAT	4	True	NA	NA	False	ATTAAA	-28	NA	27663614	27650808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661389_27662178_27662282_27663328
transcript_76323.known	chr2	-	2280	6	FSM	ENSG00000119760.16	ENST00000405491.5	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	69.7091098781214	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTTTTCATTTAACTT	-21	True	NA	-21	True	AATATA	-14	NA	27663639	27653062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661602_27662178_27662282_27663328
transcript_76334.known	chr2	-	2869	5	FSM	ENSG00000119760.16	ENST00000406540.5	2869	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_4	17.6405073623181	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTGATTCATTTTT	-22	True	NA	-10	True	AATATA	-25	NA	27663640	27653051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27662282_27663328
transcript_76335.known	chr2	-	4114	5	FSM	ENSG00000119760.16	ENST00000404798.6	4114	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	91.1794247623881	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGGATTCTGATTCATT	-8	True	NA	NA	False	ATTAAA	-25	NA	27663840	27650811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27662178_27662282_27663328
transcript_7634.nnic	chr1	+	910	5	NNC	ENSG00000162688.17	novel	7179	34	NA	NA	-470	-12041	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	92.0526344001083	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	NA	False	NA	9	True	ATTAAA	-18	NA	99849890	99864556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_99850102_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_76340.known	chr2	-	1472	2	FSM	ENSG00000176714.10	ENST00000394775.3	1472	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTACTCTTAAGTGCTA	119	False	NA	NA	False	ATTAAA	-12	NA	27628878	27626928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27627918_27628395
transcript_76341.known	chr2	-	2343	2	FSM	ENSG00000176714.10	ENST00000324364.4	2343	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTCCAATGTAACAC	-15	True	NA	0	True	AATAAA	-22	NA	27629012	27625637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27627918_27628949
transcript_76346.nnic	chr2	-	447	2	NNC	ENSG00000205334.3	novel	599	2	NA	NA	-331	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGCTTTTTTTTGAC	648	False	NA	2	True	AATAAA	-22	NA	27716063	27707502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27707883_27715996
transcript_76348.nnic	chr2	-	559	2	NIC	ENSG00000205334.3	novel	2860	2	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAATTTCTTTGCTTTT	942	False	NA	-5	True	AATAAA	-15	NA	27715769	27707509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_27707883_27715583
transcript_76349.known	chr2	-	2860	2	FSM	ENSG00000205334.3	ENST00000379677.2	2860	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTGCCCATTATTC	5	True	NA	NA	False	AATAAA	-18	NA	27715732	27705785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27708497_27715583
transcript_7635.nic	chr1	+	1066	5	ISM	ENSG00000162688.17	ENST00000361915.8	7091	34	-312	59464	-312	-12041	5prime_fragment	FALSE	canonical	3	181	junction_1	22.9387772123974	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	NA	False	NA	9	True	ATTAAA	-18	NA	99850048	99864556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_7636.nic	chr1	+	918	5	ISM	ENSG00000162688.17	ENST00000370163.7	7166	34	-89	59464	39	-12041	5prime_fragment	FALSE	canonical	2	3	junction_1	95.4708725214136	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	8	True	NA	9	True	ATTAAA	-18	NA	99850399	99864556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_99850619_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_76367.known	chr2	+	587	4	FSM	ENSG00000243147.8	ENST00000476552.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	460.8198008863	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTATAGCCCTTAAT	202	False	NA	-24	True	NA	NA	NA	27772189	27779697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27772386_27772673_27772693_27774423_27774531_27779432
transcript_76383.known	chr2	+	729	3	FSM	ENSG00000243147.8	ENST00000483992.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	630	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTGCTATTGTGTCT	-13	True	NA	10	True	AATAAA	-12	NA	27771974	27779731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27772386_27772673_27772693_27779432
transcript_76387.nnic	chr2	+	707	2	Fusion	ENSG00000289326.1_ENSG00000243147.8	novel	652	3	NA	NA	-289	0	multi-exon	FALSE	canonical	3	43	junction_1	0	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTATTGTGTCTTA	NA	False	NA	12	True	AATAAA	-14	NA	27752541	27779733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_27752948_27779432
transcript_76388.known	chr2	+	404	3	FSM	ENSG00000243147.8	ENST00000379666.7	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1283	junction_2	412.5	4027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTATTGTGTCTTAG	-21	True	NA	13	True	AATAAA	-15	NA	27771716	27779734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27771800_27772673_27772693_27779432
transcript_76389.known	chr2	+	508	4	FSM	ENSG00000243147.8	ENST00000296102.8	508	4	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_3	522.099820170647	4740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTATTGTGTCTTA	-19	True	NA	12	True	AATAAA	-14	NA	27771718	27779733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27771800_27772673_27772693_27774423_27774531_27779432
transcript_7639.nnic	chr1	+	2707	11	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	116	junction_7	191.11904666987	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	-10	True	NA	29	True	AATAAA	-34	NA	100038094	100083377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_76397.known	chr2	-	1247	8	FSM	ENSG00000171174.15	ENST00000302188.8	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	3.92272291935599	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTAACCTCAATTGTC	-13	True	NA	84	True	ATTAAA	-33	NA	27890387	27781378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27781789_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
transcript_76398.known	chr2	+	1752	14	FSM	ENSG00000158019.21	ENST00000379632.6	1752	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	112.2232559303	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	26	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_76401.known	chr2	+	1686	13	FSM	ENSG00000158019.21	ENST00000361704.6	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	89.6222008705928	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	26	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_76403.known	chr2	+	1852	13	FSM	ENSG00000158019.21	ENST00000344773.6	1852	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	94.615743345856	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	-38	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28327273_28327448_28338449
transcript_76404.known	chr2	+	1681	13	FSM	ENSG00000158019.21	ENST00000342045.6	1681	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	92.9627688318764	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	25	True	NA	21	True	ATTAAA	-27	NA	27890791	28338901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_76405.known	chr2	+	1678	12	FSM	ENSG00000158019.21	ENST00000379624.6	1678	12	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	26.2860928569833	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	-38	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_7641.known	chr1	+	5708	8	FSM	ENSG00000117620.15	ENST00000370153.6	5708	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	31.2200877249091	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCTATATTTCCTTA	-9	True	NA	104	True	CATAAA	-15	NA	99970435	100026979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_99970645_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_7642.known	chr1	+	1989	7	FSM	ENSG00000117620.15	ENST00000640715.1	1989	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	36.2522029981934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTGTAAAAACTTCTTTA	-3	True	NA	8	True	ATTAAA	-18	NA	99970012	100023453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100022385
transcript_76421.known	chr2	+	4771	9	FSM	ENSG00000213639.10	ENST00000358506.6	4771	9	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	181.855325396316	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGACCATAAATCT	3	True	NA	11	True	ATTAAA	-11	NA	28751747	28802930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_7643.known	chr1	+	1777	7	FSM	ENSG00000117620.15	ENST00000640732.1	1777	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	34.515696912178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCAGATTAAGTCCTTA	14	True	NA	NA	False	NA	NA	NA	99970029	100023247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_76446.nnic	chr2	-	1553	5	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_4	109.135237205955	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-21	True	NA	NA	False	AATAAA	-20	NA	28870312	28849820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28869578
transcript_7645.known	chr1	-	655	2	FSM	ENSG00000228084.2	ENST00000454219.2	726	2	71	0	71	0	multi-exon	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGGGTATGTCTTTATC	61	False	NA	-3	True	ATTAAA	-17	NA	99969864	99968382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_99968478_99969304
transcript_76460.known	chr2	+	4916	8	FSM	ENSG00000213639.10	ENST00000395366.3	4916	8	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_6	69.9979591539231	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAATCTTTGCTTCTTT	-3	True	NA	21	True	ATTAAA	-21	NA	28751829	28802940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_76461.known	chr2	+	584	4	FSM	ENSG00000213639.10	ENST00000441461.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	256.41156153514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTGAAAATAAAGACTT	-6	True	NA	NA	False	NA	NA	NA	28751738	28779039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808
transcript_76462.known	chr2	-	1844	7	FSM	ENSG00000171103.11	ENST00000306108.10	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	39.8148492678576	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-18	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_76463.known	chr2	-	685	3	FSM	ENSG00000171103.11	ENST00000419999.5	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	129	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	8989	False	NA	NA	False	AATAAA	-20	NA	28851283	28849820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_28850243_28850327_28850406_28851098
transcript_76464.known	chr2	-	1584	6	FSM	ENSG00000171103.11	ENST00000439947.1	1584	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	95.8073066107173	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCATTTTAAGATAAAT	-4	True	NA	NA	False	AATAAA	-1	NA	28870295	28849839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_28850243_28850327_28850406_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_76466.known	chr2	+	3506	18	FSM	ENSG00000163811.12	ENST00000407426.8	3506	18	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_7	54.0044211954032	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCTTGTGGTATAT	-13	True	NA	18	True	AATAAA	-17	NA	28894666	28948219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578_28929711_28935520_28935608_28936921_28936954_28937930_28937995_28941460_28941575_28942311_28942382_28946449_28946500_28946599
transcript_76478.nic	chr2	+	1410	11	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-22	18590	-22	3144	5prime_fragment	FALSE	canonical	3	453	junction_7	52.4724689718332	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGACCTCCAGAC	27	False	NA	NA	False	NA	NA	NA	28894644	28929629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578
transcript_7649.known	chr1	+	2779	12	FSM	ENSG00000156875.14	ENST00000370152.8	2779	12	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_6	46.3520484627618	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	-10	True	NA	29	True	AATAAA	-34	NA	100038094	100083377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_76490.known	chr2	+	2560	5	FSM	ENSG00000119801.13	ENST00000379520.7	2560	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	159.690912390154	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	NA	False	NA	22	True	AATAAA	-18	NA	30146940	30160533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30147063_30148244_30148542_30155849_30155911_30156627_30156793_30158618
transcript_76493.known	chr2	+	2197	4	FSM	ENSG00000119801.13	ENST00000402003.7	2197	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	174.25460299994	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	3	True	NA	22	True	AATAAA	-18	NA	30147006	30160533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30147063_30148244_30148306_30156627_30156793_30158618
transcript_76496.known	chr2	+	2499	4	FSM	ENSG00000119801.13	ENST00000379519.7	2499	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	160.787644633121	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	NA	False	NA	22	True	AATAAA	-18	NA	30146940	30160533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30147063_30148244_30148542_30156627_30156793_30158618
transcript_765.known	chr1	-	2725	14	FSM	ENSG00000131584.19	ENST00000467278.5	2725	14	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	15.8083941450037	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTCATGTTCTTT	9080	False	NA	-6	True	CATAAA	-20	NA	1298955	1292869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1293709_1293822_1293934_1294089_1294200_1294401_1294629_1294717_1294817_1295446_1295555_1295735_1295939_1296014_1296110_1296210_1296281_1296424_1296634_1297821_1297934_1298012_1298114_1298369_1298422_1298566
transcript_7650.known	chr1	-	3972	16	FSM	ENSG00000156876.10	ENST00000462159.1	3972	16	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_14	8.29832647117611	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAGTACTTCAAAAC	-21	True	NA	-28	True	AATAAA	-25	NA	100132955	100083562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_76503.known	chr2	+	653	3	FSM	ENSG00000119801.13	ENST00000470120.5	653	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	197.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAGATGGAACCTTTCT	90	False	NA	NA	False	AATGAA	-24	NA	30147951	30158966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30148092_30156627_30156793_30158618
transcript_76505.known	chr2	+	2136	3	FSM	ENSG00000119801.13	ENST00000261353.9	2136	3	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	43.5	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	3	True	NA	22	True	AATAAA	-18	NA	30147006	30160533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30147063_30156627_30156793_30158618
transcript_76506.known	chr2	+	2930	3	FSM	ENSG00000213626.13	ENST00000395323.9	2930	3	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	19.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTCTGGTTTCCTTTT	0	True	NA	19	True	AATAAA	-19	NA	30231533	30260028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30231765_30234404_30234508_30257432
transcript_7651.known	chr1	-	3848	17	FSM	ENSG00000156876.10	ENST00000287482.6	3848	17	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_15	8.53828693298603	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTGAAAATCAAGTACT	4	True	NA	-35	True	AATAAA	-18	NA	100132930	100083569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_76510.known	chr2	+	485	3	FSM	ENSG00000213626.13	ENST00000401506.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	133.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGAGTTGGTTTTCTTTTC	-17	True	NA	NA	False	NA	NA	NA	30232152	30257760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30232207_30234404_30234508_30257432
transcript_76513.known	chr2	+	756	3	FSM	ENSG00000213626.13	ENST00000407930.2	756	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	131.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTTTCCCATCATGA	10	True	NA	NA	False	NA	NA	NA	30232179	30257670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30232595_30234404_30234508_30257432
transcript_76515.nic	chr2	+	1554	2	ISM	ENSG00000213626.13	ENST00000464412.5	494	3	-25	20996	-22	-20996	5prime_fragment	FALSE	canonical	3	231	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATAGAAAGCCAGGGAG	634	False	NA	NA	False	ATTAAA	-13	NA	30231511	30235705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_30231765_30234404
transcript_76516.known	chr2	+	2774	7	FSM	ENSG00000172954.14	ENST00000319406.8	2774	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	59.4577347552211	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	7	True	NA	NA	False	NA	NA	NA	30447242	30607845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30447384_30459551_30459723_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30606015
transcript_76518.known	chr2	+	4879	6	FSM	ENSG00000172954.14	ENST00000379509.8	4879	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	14.2211110677049	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	10	True	NA	NA	False	AATAAA	-21	NA	30447245	30644225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
transcript_7652.known	chr1	+	3130	11	FSM	ENSG00000122435.11	ENST00000370141.8	3128	11	0	-2	0	2	multi-exon	FALSE	canonical	3	36	junction_5	10.5470374987482	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	7	True	NA	12	True	AATAAA	-20	NA	100133162	100150498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_76523.known	chr2	+	583	4	FSM	ENSG00000172954.14	ENST00000466477.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	56.4092191046818	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTCATAAAATTACCT	-10	True	NA	NA	False	NA	NA	NA	30447225	30552549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30552492
transcript_76525.known	chr2	+	560	4	FSM	ENSG00000172954.14	ENST00000465538.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	67.9018900080599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTCACACATTATTTTAA	20	True	NA	NA	False	NA	NA	NA	30447255	30533319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30447384_30476576_30476636_30525586_30525756_30533115
transcript_76530.known	chr2	-	2683	23	FSM	ENSG00000162949.16	ENST00000295055.12	2683	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	5.43709329247479	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCTCATTCATATTCTG	-15	True	NA	-12	True	AATAAA	-17	NA	30807446	30722770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_30723237_30730729_30730787_30731343_30731400_30732437_30732567_30734448_30734525_30736502_30736572_30738234_30738294_30738399_30738458_30741907_30741965_30742325_30742360_30743382_30743580_30745722_30745735_30751102_30751252_30753052_30753199_30754289_30754365_30758045_30758138_30763081_30763157_30764131_30764307_30770312_30770450_30775929_30776046_30777566_30777640_30787127_30787358_30807301
transcript_76536.known	chr2	-	2447	15	FSM	ENSG00000158089.15	ENST00000349752.10	2447	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	7.56097661330458	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTGCTCTTTTCTTC	16	True	NA	-1	True	AATAAA	-26	NA	31138440	30910466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_30911060_30912222_30912343_30924118_30924264_30924739_30924824_30929394_30929488_30932067_30932195_30942200_30942305_30944857_30944943_30945782_30945871_30955617_30955740_30955911_30955978_30958396_30958465_30966203_30966303_30992837_30993008_31137957
transcript_76538.known	chr2	+	4825	6	FSM	ENSG00000013016.16	ENST00000322054.10	4825	6	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_5	5.2687759489278	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGAGGAGGGGCACACA	-4	True	NA	27	True	AATAAA	-21	NA	31234151	31269451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_31234849_31244273_31244451_31249370_31249469_31260509_31260923_31261548_31261714_31266176
transcript_76540.nnic	chr2	-	820	5	NNC	ENSG00000158125.10	novel	5715	36	NA	NA	-82074	-15520	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.22474487139159	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAGGAGATTGAGAATG	NA	False	NA	NA	False	NA	NA	NA	31496816	31398601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_31398700_31401219_31401329_31403047_31403145_31405906_31405965_31496358
transcript_76547.known	chr2	-	1516	10	FSM	ENSG00000162959.14	ENST00000404530.6	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	75.3384134635836	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	4	True	NA	NA	False	AATAAA	-19	NA	32011008	31867822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010941
transcript_76565.known	chr2	-	1242	7	FSM	ENSG00000162959.14	ENST00000490459.5	1242	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	122.176670804573	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGTCTGATTTAAACT	NA	False	NA	NA	False	AATAAA	-15	NA	32011036	31867826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_31868493_31869847_31869953_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010941
transcript_76569.known	chr2	-	1336	8	FSM	ENSG00000162959.14	ENST00000426310.6	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	81.5535381932429	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAAGGTGGAAGCTT	637	False	NA	NA	False	NA	NA	NA	32010375	31867977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31943301_31943384_32010186
transcript_76579.known	chr2	-	688	5	FSM	ENSG00000162961.14	ENST00000342166.10	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	1437	junction_4	158.368241765829	21874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAAGTAGTTTTTG	1	True	NA	-12	True	AATAAA	-15	NA	32039805	32023904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_76580.known	chr2	-	523	6	FSM	ENSG00000162961.14	ENST00000414013.5	523	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	799.450961598021	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAATTCATA	13	True	NA	-31	True	NA	NA	NA	32039793	32011906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32012053_32023421_32023475_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_76581.known	chr2	-	637	7	FSM	ENSG00000162961.14	ENST00000452582.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	832.50498830671	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGTCTCCTATGTTC	52	False	NA	-10	True	AATAAA	-11	NA	32039754	32011885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32012053_32023421_32023475_32023676_32023809_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_76583.known	chr2	-	712	1	FSM	ENSG00000272716.1	ENST00000608489.1	712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATGTAGCACGTGTG	-10	True	NA	NA	False	ATTAAA	-16	NA	32165757	32165045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32165000_32165800
transcript_76584.known	chr2	+	2354	15	FSM	ENSG00000152683.14	ENST00000379343.6	2354	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	46.1924214121577	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTGTTCAAAAAGTAAAA	-1	True	NA	NA	False	TATAAA	-41	NA	32165863	32221524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32177476_32177597_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_76589.known	chr2	+	5089	14	FSM	ENSG00000152683.14	ENST00000282587.9	5089	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	17.3832538609116	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGGCATCCTTTTG	-1	True	NA	16	True	ATTAAA	-19	NA	32165863	32224379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_766.known	chr1	+	1257	8	FSM	ENSG00000169972.12	ENST00000379031.10	1257	8	0	0	0	0	multi-exon	TRUE	canonical	3	302	junction_1	30.8439125075842	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	-23	True	NA	9	True	AATAAA	-17	NA	1308596	1311677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1308721_1308914_1308973_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
transcript_76608.known	chr2	+	4776	13	FSM	ENSG00000152683.14	ENST00000435660.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	36.1435217800738	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTTTCTTTATTCAG	NA	False	NA	39	True	ATTAAA	-32	NA	32165840	32224112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32220212
transcript_76613.nic	chr2	+	1057	4	ISM	ENSG00000152683.14	ENST00000457724.2	570	8	-35	16805	6	-16805	5prime_fragment	FALSE	canonical	3	109	junction_1	20.6074420214316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAAATTATAATT	-1	True	NA	NA	False	AAAAAG	-5	NA	32165846	32176146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318
transcript_76615.known	chr2	+	11955	6	FSM	ENSG00000119820.11	ENST00000238831.9	11955	6	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	31.7653899708472	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATTAATTTGTCTTTT	-16	True	NA	4	True	AATAAA	-16	NA	32277903	32316594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32278235_32290482_32290637_32292176_32292349_32298233_32298312_32301381_32301496_32305488
transcript_76619.known	chr2	+	11526	58	FSM	ENSG00000115760.15	ENST00000648282.1	11526	58	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_56	23.1183607257731	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAATTAGTGAACAAAAA	84	False	NA	NA	False	NA	NA	NA	32357324	32524908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32357487_32377587_32377770_32380152_32380291_32388749_32388944_32392038_32392151_32395510_32395594_32401162_32401386_32401462_32401624_32406498_32406558_32414768_32416164_32429145_32429296_32430864_32431091_32433643_32433805_32436052_32436185_32439507_32439687_32441328_32441463_32442064_32442227_32442323_32442456_32443490_32443589_32445520_32445669_32448794_32448929_32453807_32453955_32463193_32463382_32464508_32464824_32465064_32465165_32467524_32467740_32467902_32468112_32468436_32468784_32469394_32469615_32470167_32470302_32471013_32471152_32473111_32473240_32476212_32476345_32477367_32477584_32478634_32478819_32479461_32479618_32481319_32481454_32482428_32482583_32485642_32485760_32487646_32487802_32488587_32488715_32490040_32490152_32491424_32491559_32493539_32493668_32499546_32500110_32501712_32501889_32502794_32502892_32503041_32503237_32505004_32505206_32507979_32508260_32509737_32509995_32510525_32510635_32512932_32513155_32514989_32515771_32518253_32518398_32518816_32518947_32521661_32521758_32524887
transcript_76622.known	chr2	+	2888	20	FSM	ENSG00000018699.13	ENST00000317907.9	2888	20	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_17	24.3927921782093	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	6	True	NA	10	True	AATAAA	-18	NA	32628049	32821051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_76624.known	chr2	-	2751	8	FSM	ENSG00000119812.20	ENST00000238823.13	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_3	73.7635494298491	3270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTTGAGTTTTATT	-9	True	NA	-17	True	AATAAA	-18	NA	33599299	33583659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
transcript_76625.known	chr2	-	655	3	ISM	ENSG00000119812.20	ENST00000689713.1	2482	9	-35	8237	-35	-6309	5prime_fragment	FALSE	canonical	3	756	junction_1	56	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAGACGTGTGCACTGG	NA	False	NA	NA	False	AATAAA	-30	NA	33599382	33591922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_33592215_33595488_33595638_33599168
transcript_76626.known	chr2	-	260	2	ISM	ENSG00000119812.20	ENST00000464415.2	7860	5	8	11815	7	-9873	5prime_fragment	FALSE	canonical	3	868	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAACATTCACTTTTAG	13	True	NA	NA	False	NA	NA	NA	33599277	33595486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_33595638_33599168
transcript_7663.nic	chr1	+	944	10	ISM	ENSG00000122435.11	ENST00000370141.8	3128	11	-20	2502	-7	-2502	5prime_fragment	FALSE	canonical	3	36	junction_5	10.6990249930762	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTACACTTTGGCCAA	-13	True	NA	NA	False	CATAAA	-20	NA	100133142	100147994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893
transcript_76648.nnic	chr2	-	1291	3	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTGTCACAGGCTAG	NA	False	NA	NA	False	ATTAAA	-15	NA	35816065	35680082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_35680687_35683336_35683426_35815467
transcript_76649.nnic	chr2	-	591	2	Genic_Genomic	ENSG00000260025.1	novel	366	1	NA	NA	-331	0	multi-exon	FALSE	canonical	3	45	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTCTTTGTGATAAATC	340	False	NA	-3	True	AATAAA	-15	NA	36355445	36354748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_36354982_36355087
transcript_76651.known	chr2	+	311	3	FSM	ENSG00000150938.10	ENST00000477491.5	311	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCAGTGCAAATGAGTA	1666	False	NA	NA	False	AATAAA	-1	NA	36378356	36379213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_36378526_36378853_36378925_36379142
transcript_76653.known	chr2	-	2097	9	FSM	ENSG00000171055.15	ENST00000379245.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	25.8623157315813	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	-23	True	NA	-20	True	AATAAA	-19	NA	36598191	36552257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36560784_36560866_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_76654.known	chr2	-	1993	8	FSM	ENSG00000171055.15	ENST00000405912.8	1993	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	7.49149177264394	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	0	True	NA	-20	True	AATAAA	-19	NA	36598168	36552257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_76659.known	chr2	-	14174	18	FSM	ENSG00000115808.12	ENST00000263918.9	14174	18	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_13	12.938502397521	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGAATTGCATATTT	25	True	NA	NA	False	AATAAA	-21	NA	36966536	36837697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_36849626_36849713_36849801_36850999_36851108_36855211_36855353_36857855_36858024_36861131_36861254_36867813_36867862_36869553_36869730_36877890_36878028_36883931_36884076_36886715_36886827_36893897_36894034_36899522_36899659_36902583_36902752_36905539_36905619_36916077_36916152_36925104_36925209_36966229
transcript_76665.known	chr2	-	6937	36	FSM	ENSG00000008869.12	ENST00000233099.6	6937	36	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_28	12.018013690341	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATGTTTAAATGTAAT	-26	True	NA	NA	False	ATTAAA	-20	NA	37084372	36980894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_36981795_36988645_36988860_36990647_36990800_37000585_37000814_37002305_37002573_37003541_37003687_37005631_37005760_37007049_37007305_37008610_37008849_37013840_37014021_37019808_37019878_37020654_37020837_37027922_37028175_37028680_37028921_37032628_37032774_37037854_37038025_37040328_37040519_37041132_37041293_37049652_37049844_37053501_37053608_37056439_37056616_37057316_37057481_37058450_37058561_37058887_37058988_37060580_37060734_37061938_37062051_37064739_37064991_37065754_37065911_37068680_37068931_37070229_37070388_37072109_37072282_37075484_37075635_37076910_37077020_37079119_37079332_37083288_37083437_37084268
transcript_76668.nnic	chr2	-	572	3	NNC	ENSG00000008869.12	novel	6937	36	NA	NA	-6	-9858	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGTA	-32	True	NA	NA	False	NA	NA	NA	37084378	37082069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_37082384_37083288_37083437_37084268
transcript_76669.nic	chr2	-	1475	2	ISM	ENSG00000008869.12	ENST00000233099.6	6937	36	-6	101177	-6	-9860	5prime_fragment	FALSE	canonical	3	66	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-32	True	NA	NA	False	NA	NA	NA	37084378	37082071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_37083437_37084268
transcript_76671.known	chr2	-	10103	17	FSM	ENSG00000055332.19	ENST00000681507.1	10103	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_16	26.7738649385926	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	NA	False	NA	0	True	AATAAA	-20	NA	37157192	37099209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37148940_37156907
transcript_76672.known	chr2	-	9975	17	FSM	ENSG00000055332.19	ENST00000233057.9	9975	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_16	17.9964189146063	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-14	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_76673.known	chr2	-	9835	16	FSM	ENSG00000055332.19	ENST00000679507.1	9835	16	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_15	33.2519005304793	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	106	False	NA	0	True	AATAAA	-20	NA	37157007	37099209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37156907
transcript_76677.known	chr2	+	3839	9	FSM	ENSG00000152133.16	ENST00000674370.2	3839	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	2.02715934252836	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	-8	True	NA	44	True	AATAAA	-19	NA	37084517	37099244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_76679.nic	chr2	+	790	7	ISM	ENSG00000152133.16	ENST00000409774.6	3905	9	-42	5087	-42	-168	5prime_fragment	FALSE	canonical	3	43	junction_5	2.26691175145591	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGGATGAAGATGAATA	NA	False	NA	30	True	AAGAAA	-3	NA	37084408	37094156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081
transcript_76680.nic	chr2	+	1592	7	ISM	ENSG00000152133.16	ENST00000409774.6	3905	9	-42	4285	-42	634	5prime_fragment	FALSE	canonical	3	43	junction_5	2.26691175145591	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGGAGATTATTCAAG	NA	False	NA	NA	False	NA	NA	NA	37084408	37094958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081
transcript_76681.known	chr2	+	3570	7	FSM	ENSG00000152133.16	ENST00000281932.6	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	13.3873904186821	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	-8	True	NA	44	True	AATAAA	-19	NA	37084517	37099244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37084571_37088368_37088441_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_7669.nic	chr1	+	1267	9	ISM	ENSG00000122435.11	ENST00000370141.8	3128	11	-20	5929	-7	0	5prime_fragment	FALSE	canonical	3	36	junction_5	11.2187064762387	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	-13	True	NA	NA	False	AATAAA	-9	NA	100133142	100144567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068
transcript_767.known	chr1	-	2114	17	FSM	ENSG00000127054.22	ENST00000435064.6	2114	17	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_8	42.5069387718052	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGTACTCTCTTCTT	-3	True	NA	-15	True	AGTAAA	-15	NA	1324660	1311599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_7670.nnic	chr1	+	1152	9	NNC	ENSG00000122435.11	novel	1582	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	18.2071414560331	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	-13	True	NA	NA	False	AATAAA	-9	NA	100133142	100144567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140966_100141020_100143136_100143210_100144068
transcript_76715.known	chr2	+	3152	5	FSM	ENSG00000218739.10	ENST00000402297.6	3152	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	31.2439994238894	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTTTTGTTTCAG	6	True	NA	22	True	AATAAA	-33	NA	37196495	37204743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37201862
transcript_76716.known	chr2	+	695	5	FSM	ENSG00000218739.10	ENST00000392061.6	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	70.8003354511827	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	18	False	NA	18	True	AATAAA	-29	NA	37196507	37204739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37204303
transcript_76717.known	chr2	-	3346	16	FSM	ENSG00000115816.15	ENST00000234170.10	3346	16	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_12	66.4989891318323	3166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGGAAGCATTGTTA	353	False	37231614	-45	True	AATAAA	-31	NA	37231596	37201611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37201904_37202783_37202866_37202949_37203009_37210998_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_76721.known	chr2	-	6156	19	FSM	ENSG00000115825.11	ENST00000234179.8	6156	19	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_17	46.2805454687916	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGATTATCTGGAG	0	True	NA	16	True	AATAAA	-31	NA	37324833	37250501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37324680
transcript_7673.nnic	chr1	+	1110	9	NNC	ENSG00000122435.11	novel	1582	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_6	20.8431643470947	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	-13	True	NA	NA	False	AATAAA	-9	NA	100133142	100144567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140449_100140515_100140966_100141020_100143136_100143210_100144068
transcript_76752.known	chr2	+	2184	10	FSM	ENSG00000003509.16	ENST00000002125.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_5	71.6324638452651	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	-19	True	NA	NA	False	AATAAA	-25	NA	37231657	37249160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241792_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_76753.known	chr2	+	2974	9	FSM	ENSG00000003509.16	ENST00000474154.5	2974	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	131.176348382626	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	-14	True	NA	NA	False	AATAAA	-25	NA	37231662	37249160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37242694_37243910_37243974_37246051_37246196_37247455_37247630_37248134
transcript_76754.known	chr2	+	1869	8	FSM	ENSG00000003509.16	ENST00000336237.10	1869	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	171.665669371649	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	2	True	NA	NA	False	AATAAA	-25	NA	37231678	37249160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37231761_37232105_37232267_37237756_37237868_37241577_37241638_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_76756.known	chr2	+	1683	7	FSM	ENSG00000115828.17	ENST00000338415.8	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	5.46707315561891	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCTTTTTTAT	0	True	NA	NA	False	ATTAAA	-18	NA	37344629	37373322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37344852_37352788_37352936_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_76758.known	chr2	+	992	6	FSM	ENSG00000115828.17	ENST00000404976.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.7384541014893	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGAAGAAAATTTGGATG	1770	False	NA	NA	False	NA	NA	NA	37344593	37372742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37344852_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_76759.known	chr2	-	997	2	FSM	ENSG00000163171.8	ENST00000457889.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTAAGTCAGAGGAGT	6	True	NA	NA	False	NA	NA	NA	37672199	37645940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37646823_37672084
transcript_76760.known	chr2	+	1893	11	FSM	ENSG00000115841.21	ENST00000354545.8	1893	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	4.07553677446297	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTTCACTCGTGTCCA	7	True	NA	4	True	AATAAA	-31	NA	37925286	38017744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37925426_37929261_37929730_37974039_37974215_37975211_37975315_37981282_37981344_37989540_37989617_37991219_37991298_37997415_37997515_38003990_38004045_38004135_38004217_38017185
transcript_76768.known	chr2	-	1600	12	FSM	ENSG00000119787.14	ENST00000651368.1	1600	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	127.341215338817	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGAAGTAGTTTAGT	16	True	NA	-7	True	AATAAA	-22	NA	38377262	38295902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38377142
transcript_7677.known	chr1	+	1582	8	FSM	ENSG00000122435.11	ENST00000482437.5	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	11.962526523119	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	9	True	NA	NA	False	AATAAA	-9	NA	100133164	100144567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100141020_100143136_100143210_100144068
transcript_76771.nic	chr2	-	2379	9	NIC	ENSG00000119787.14	novel	1905	12	NA	NA	-39	269	combination_of_known_junctions	FALSE	canonical	2	28	junction_8	137.237704367277	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTGTGATTCTTTTT	740	False	NA	NA	False	ATTAAA	-21	NA	38377324	38294884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314655_38377142
transcript_76773.known	chr2	-	3805	13	FSM	ENSG00000119787.14	ENST00000378954.9	3805	13	0	0	0	0	multi-exon	TRUE	canonical	3	328	junction_1	59.3129061278684	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTAGACCATTGGCT	5	True	NA	NA	False	ATTAAA	-24	NA	38377273	38293953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_76774.known	chr2	-	561	3	FSM	ENSG00000119787.14	ENST00000472097.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	51.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCAGTATTAAAAATCAAAA	5	True	NA	NA	False	NA	NA	NA	38377273	38318834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38319020_38343267_38343513_38377142
transcript_76775.known	chr2	-	2335	13	FSM	ENSG00000119787.14	ENST00000419554.6	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.93657464507	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGAAGTAGTTTAGTGT	5	True	NA	-5	True	AATAAA	-24	NA	38377273	38295900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38296591_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_76776.known	chr2	-	576	4	FSM	ENSG00000119787.14	ENST00000451483.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	181.748911046715	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACAAGTTTGGAATGAAG	-1	True	NA	NA	False	NA	NA	NA	38377279	38318936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38319020_38343267_38343513_38354066_38354178_38377142
transcript_76777.nnic	chr2	+	912	2	Genic_Genomic	ENSG00000213553.4	novel	954	1	NA	NA	-72	71	multi-exon	FALSE	canonical	0	0	junction_1	0	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	1	True	NA	NA	False	AATAAA	-19	NA	38481778	38482875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_38482317_38482501
transcript_76778.known	chr2	+	954	1	FSM	ENSG00000213553.4	ENST00000394878.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACCAAAAAGCAACCAACT	73	False	NA	NA	False	NA	NA	NA	38481850	38482804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38481800_38482800
transcript_76785.known	chr2	-	2779	14	FSM	ENSG00000143889.16	ENST00000358367.8	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	138.53788493452	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGTTTTTTTTTTCTTT	5	True	NA	-2	True	ATTAAA	-18	NA	38603036	38563185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_76795.nic	chr2	-	789	4	ISM	ENSG00000143889.16	ENST00000410076.5	1687	7	-141	4514	-34	-1746	5prime_fragment	FALSE	canonical	3	107	junction_3	223.562568920252	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGACTGATCTGTAGTTT	226	False	NA	NA	False	ATTAAA	-24	NA	38603070	38585588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_38585882_38591529_38591649_38602437_38602601_38602856
transcript_76796.known	chr2	-	1687	7	FSM	ENSG00000143889.16	ENST00000410076.5	1687	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	264.603739370571	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGCTGCATTGTTTA	-12	True	NA	-2	True	AATAAA	-16	NA	38602929	38581074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_768.known	chr1	-	1798	15	FSM	ENSG00000127054.22	ENST00000419704.5	1798	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_13	124.040233762424	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTACTTGGTACTCT	4	True	NA	-21	True	AGTAAA	-9	NA	1324653	1311605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1320995_1321094_1324580
transcript_76800.known	chr2	+	2277	7	FSM	ENSG00000143891.17	ENST00000272252.10	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	15.6035964515307	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTTGTTCCTTTACTC	18	True	NA	8	True	AATAAA	-20	NA	38666113	38734765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555_38729698_38731734_38731910_38733487
transcript_76808.nic	chr2	+	1052	5	ISM	ENSG00000143891.17	ENST00000444351.5	834	7	-339	33277	-177	17177	5prime_fragment	FALSE	canonical	2	3	junction_4	75.3769692943408	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAAAATGACACCCAT	NA	False	NA	NA	False	NA	NA	NA	38665903	38698525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38698365
transcript_76809.nic	chr2	+	1598	5	ISM	ENSG00000143891.17	ENST00000272252.10	2277	7	-210	4504	-177	-1541	5prime_fragment	FALSE	canonical	3	161	junction_3	11.2333209693305	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTGTGTGTGTGCGTG	NA	False	NA	11	True	AATAAA	-16	NA	38665903	38730261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555
transcript_7682.nnic	chr1	+	1082	8	NNC	ENSG00000122435.11	novel	1582	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	24.6195541994487	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	-13	True	NA	NA	False	AATAAA	-9	NA	100133142	100144567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140407_100140515_100140966_100141020_100143136_100143210_100144068
transcript_76847.known	chr2	-	2453	7	FSM	ENSG00000115875.19	ENST00000446327.6	2453	7	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	663.387623406473	2349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATACTTAATTTTTGG	NA	False	NA	NA	False	AATAAA	-23	NA	38751494	38743598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38745188_38746693_38746748_38748046_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_76848.known	chr2	-	1050	8	FSM	ENSG00000115875.19	ENST00000409276.5	1050	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	691.848337751114	10965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	1	True	NA	29	True	AATAAA	-16	NA	38751358	38744892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_76849.known	chr2	-	1903	7	FSM	ENSG00000115875.19	ENST00000443213.5	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	195.45218227371	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAATGTTTCTAA	7	True	NA	4	True	NA	NA	NA	38751352	38744917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38749706_38750013_38750195_38751228
transcript_76852.known	chr2	+	834	4	FSM	ENSG00000152147.11	ENST00000409566.1	834	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	139.538127007958	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTTTAAATGTAAATG	-6	True	NA	-8	True	AAAAAG	-21	NA	38778209	38781947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38778282_38778971_38779119_38779257_38779442_38781516
transcript_76854.known	chr2	+	3705	3	FSM	ENSG00000152147.11	ENST00000281950.8	3705	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	13.5	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTATTTTTTGTCTCCT	-6	True	NA	16	True	AATAAA	-19	NA	38778209	38785002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38778282_38778971_38779119_38781516
transcript_76858.known	chr2	-	4885	24	FSM	ENSG00000163214.21	ENST00000457308.6	4885	24	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_15	15.2476717364896	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	-27	True	NA	-5	True	ATTAAA	-17	NA	38875934	38797728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38798443_38802714_38802916_38806558_38806694_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268_38848403_38854053_38854179_38855056_38855253_38856339_38856462_38858660_38858837_38860998_38861838_38862144_38862334_38863360_38863520_38868181_38868412_38875786
transcript_76865.known	chr2	+	750	5	FSM	ENSG00000188010.16	ENST00000410014.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.658332954511	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAACTTTATA	-13	True	NA	3	True	AATAAA	-15	NA	38875990	38882646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38876212_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_76868.known	chr2	+	456	3	FSM	ENSG00000214694.12	ENST00000430382.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCACATTTGTCCTGGG	20	True	NA	NA	False	NA	NA	NA	38960560	38969641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38960640_38966005_38966146_38969404
transcript_76870.known	chr2	+	648	5	FSM	ENSG00000188010.16	ENST00000409665.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	83.7447759564738	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	7	True	NA	4	True	AATAAA	-16	NA	38876010	38882647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38876111_38880178_38880230_38880581_38880707_38881441_38881579_38882412
transcript_76871.known	chr2	-	4335	34	FSM	ENSG00000011566.15	ENST00000263881.8	4335	34	0	0	0	0	multi-exon	TRUE	canonical	3	191	junction_19	36.8486592898582	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCATCTGGTTTAATC	-3	True	NA	1	True	AATAAA	-30	NA	39437285	39249265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39307942_39308006_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_76877.known	chr2	-	407	3	FSM	ENSG00000011566.15	ENST00000484274.1	407	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTAGTTTTTCTTCA	217	False	NA	NA	False	AATAAA	-17	NA	39437065	39356164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39356340_39378065_39378124_39436891
transcript_76878.known	chr2	+	2536	7	FSM	ENSG00000231312.8	ENST00000449569.6	2536	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	24.4653950623233	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAACCCCGTCTCTAC	4	True	NA	NA	False	NA	NA	NA	39437432	39601315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39557981_39558047_39599365
transcript_76880.known	chr2	+	3990	6	FSM	ENSG00000231312.8	ENST00000667600.1	3990	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	19.5897932607774	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCTTGTACAAGTATT	NA	False	NA	-8	True	AATAAA	-8	NA	39437226	39602628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39599365
transcript_76883.known	chr2	+	2349	5	FSM	ENSG00000231312.8	ENST00000658057.1	2349	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	27.3906918496047	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	13	True	NA	NA	False	NA	NA	NA	39437441	39601330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39599365
transcript_76886.known	chr2	+	1086	4	FSM	ENSG00000231312.8	ENST00000445520.7	1091	4	5	0	1	0	multi-exon	FALSE	canonical	3	28	junction_3	17.5182444579612	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTAGCTCACACCTG	-4	True	NA	NA	False	TTTAAA	-20	NA	39437424	39475339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39474526
transcript_76890.nic	chr2	+	651	3	ISM	ENSG00000231312.8	ENST00000445520.7	1091	4	-12	20613	6	0	5prime_fragment	FALSE	canonical	3	63	junction_1	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGACTCCGTCTCAAAA	-21	True	NA	NA	False	NA	NA	NA	39437407	39454726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_39437536_39453838_39453932_39454296
transcript_76891.known	chr2	+	3169	6	FSM	ENSG00000231312.8	ENST00000425775.2	3169	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	25.6951357264366	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATGGCGTGAACCCGG	12	True	NA	NA	False	NA	NA	NA	39437440	39601410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39517153_39518582_39518711_39599365
transcript_76892.nic	chr2	+	1422	4	NIC	ENSG00000152154.11	novel	569	3	NA	NA	151	0	intron_retention	FALSE	canonical	2	6	junction_1	15.5777619273972	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	50	False	NA	19	True	ATTAAA	-19	NA	39665132	39717963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_39665349_39704080_39704195_39707048_39707187_39717009
transcript_76893.known	chr2	+	1664	4	FSM	ENSG00000152154.11	ENST00000281961.3	1664	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	13.2245562832516	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	-24	True	NA	19	True	ATTAAA	-19	NA	39665916	39717963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39666375_39704080_39704195_39707048_39707187_39717009
transcript_76894.nic	chr2	+	1284	3	NIC	ENSG00000152154.11	novel	569	3	NA	NA	151	0	intron_retention	FALSE	canonical	2	6	junction_1	15.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGTTTTCCTATG	50	False	NA	19	True	ATTAAA	-19	NA	39665132	39717963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_39665349_39704080_39704195_39717009
transcript_76898.known	chr2	-	2089	11	FSM	ENSG00000138050.15	ENST00000378727.8	2089	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	61.4748729156881	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	-18	True	NA	-2	True	ATTAAA	-19	NA	39779267	39736306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_769.known	chr1	-	1134	7	FSM	ENSG00000127054.22	ENST00000488042.6	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	26.1767496496838	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGAGGGGCCATGTGCCC	28	False	NA	NA	False	NA	NA	NA	1324629	1314412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_76902.known	chr2	-	2205	10	FSM	ENSG00000138050.15	ENST00000505747.6	2205	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_8	20.4613456709637	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCTGGTTTAATGT	-9	True	NA	NA	False	AAAAAG	-22	NA	39779258	39736060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_76903.known	chr2	-	1561	10	FSM	ENSG00000138050.15	ENST00000530522.1	1561	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	75.2713609401197	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTGATGGGTACAC	28	True	NA	NA	False	NA	NA	NA	39779221	39736609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769757_39770120_39771514_39771641_39779113
transcript_76920.nic	chr2	-	498	3	ISM	ENSG00000138050.15	ENST00000403537.3	961	4	-37	1018	-9	96	5prime_fragment	FALSE	canonical	3	155	junction_1	35	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGAAGAGAATAGGGACT	-27	True	NA	NA	False	ATTAAA	-19	NA	39779276	39769920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_39770120_39771504_39771641_39779113
transcript_76921.nic	chr2	-	409	3	ISM	ENSG00000138050.15	ENST00000403537.3	961	4	-37	1107	-9	7	5prime_fragment	FALSE	canonical	3	155	junction_1	35	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTCAGAGAGATGATAA	-27	True	NA	NA	False	AAAAAG	-7	NA	39779276	39770009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_39770120_39771504_39771641_39779113
transcript_76923.known	chr2	-	399	1	FSM	ENSG00000236533.1	ENST00000414823.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATAAATCTTTGACTCA	NA	False	NA	NA	False	AAGAAA	-4	NA	41850601	41850202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_41850200_41850600
transcript_76929.nnic	chr2	+	957	2	Antisense	novelGene_ENSG00000205086.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTCCTTCTGGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	41938412	41953341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_41938639_41952610
transcript_7693.known	chr1	-	10799	11	FSM	ENSG00000137992.15	ENST00000370132.8	10799	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	9.27415764368926	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-4	True	NA	0	True	AATAAA	-20	NA	100249834	100186918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_76931.known	chr2	+	2490	7	FSM	ENSG00000162878.13	ENST00000294964.6	2490	7	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_2	25.1263473933903	2625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCTAATGACAGTTT	-2	True	NA	31	True	AATAAA	-37	NA	42048020	42058517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42048839_42053238_42053362_42054035_42054308_42054940_42055021_42055285_42055394_42057220_42057395_42057602
transcript_76934.known	chr2	+	1447	3	FSM	ENSG00000162878.13	ENST00000490302.1	1447	3	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	20	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAATAAAATAAAATT	866	False	NA	-17	True	NA	NA	NA	42054930	42058469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42055021_42055285_42055394_42057220
transcript_76939.known	chr2	+	5546	23	FSM	ENSG00000143924.19	ENST00000318522.10	5546	23	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	101.462772556618	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCTTAACTCTTTCTT	-25	True	NA	31	True	AATAAA	-27	NA	42169352	42332548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120_42261295_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_76940.known	chr2	+	962	4	FSM	ENSG00000143924.19	ENST00000409040.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_3	146.876365241882	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTTATAAACAATCT	3	True	NA	NA	False	NA	NA	NA	42169380	42261513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120
transcript_76941.known	chr2	+	3568	22	FSM	ENSG00000143924.19	ENST00000402711.6	3568	22	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_3	127.280182659985	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGCCTTCTTTAAAA	-25	True	NA	22	True	AAGAAA	-24	NA	42169352	42330744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_76948.known	chr2	-	895	3	FSM	ENSG00000115944.15	ENST00000464443.5	895	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	846.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATGGAAAGAACACAGAAG	-12	True	NA	NA	False	NA	NA	NA	42361192	42350851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_42351360_42353211_42353344_42360937
transcript_76950.known	chr2	-	516	3	FSM	ENSG00000115944.15	ENST00000468711.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	898.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATGAACATAGGCTGG	63	False	NA	NA	False	CATAAA	-19	NA	42361149	42333545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_42333870_42353211_42353344_42361089
transcript_76951.known	chr2	+	450	1	FSM	ENSG00000236913.1	ENST00000442609.1	450	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTATGTACTCACGC	NA	False	NA	NA	False	NA	NA	NA	42469816	42470266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42469800_42470300
transcript_76952.known	chr2	+	5446	17	FSM	ENSG00000057935.14	ENST00000405094.2	5446	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	618.127259222363	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTATGCTGTTCT	-13	True	NA	15	True	AATAAA	-15	NA	42568631	42756946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873_42709097_42718987_42719075_42722888_42723036_42753373
transcript_76964.known	chr2	+	2202	14	FSM	ENSG00000057935.14	ENST00000407270.7	2202	14	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_11	290.676664142347	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	-7	True	NA	19	True	AATAAA	-20	NA	42568516	42709544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
transcript_76966.known	chr2	+	1702	14	FSM	ENSG00000057935.14	ENST00000454356.5	1702	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	455.127474177817	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	30	True	NA	27	True	AATAAA	-19	NA	42568674	42709213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707910_42708055_42708873
transcript_76995.known	chr2	-	1256	10	FSM	ENSG00000162882.15	ENST00000294973.11	1256	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	10.361371757222	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGGGTCTGCCGCAG	-5	True	NA	-2	True	AATAAA	-19	NA	42792583	42767088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_42767516_42767594_42767678_42767859_42767929_42769712_42769859_42770142_42770187_42770492_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
transcript_76997.nnic	chr2	-	1119	4	NNC	ENSG00000224739.2	novel	237	3	NA	NA	-16348	28963	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.49691252107735	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAGAAAGAAAAG	NA	False	NA	NA	False	AATAAA	-35	NA	43022408	42972391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_42973011_42980282_42980447_43001318_43001481_43022234
transcript_76998.nnic	chr2	-	1138	4	NNC	ENSG00000224739.2	novel	237	3	NA	NA	-16348	28963	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	2.49443825784929	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACAGAAAGAAAAG	NA	False	NA	NA	False	AATAAA	-35	NA	43022408	42972391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_42973011_42980282_42980470_43001322_43001481_43022234
transcript_770.known	chr1	-	2428	2	FSM	ENSG00000127054.22	ENST00000496353.1	2428	2	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTTATCTTTTTTG	46	False	NA	-32	True	NA	NA	NA	1324611	1318696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1321094_1324580
transcript_7700.nic	chr1	-	1238	8	ISM	ENSG00000137992.15	ENST00000370132.8	10799	11	-69	23637	-69	-13	5prime_fragment	FALSE	canonical	3	53	junction_1	9.29998902786274	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTCTAATTCATTGTT	NA	False	NA	-14	True	ATTAAA	-22	NA	100249903	100210555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_77000.nnic	chr2	-	789	4	NNC	ENSG00000224739.2	novel	237	3	NA	NA	-16348	28633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.49691252107735	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTTTTGGAGTAATTT	NA	False	NA	-3	True	GATAAA	-22	NA	43022408	42972721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_42973011_42980282_42980447_43001318_43001481_43022234
transcript_77001.nnic	chr2	-	808	4	NNC	ENSG00000224739.2	novel	237	3	NA	NA	-16348	28633	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	2.49443825784929	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTTTTGGAGTAATTT	NA	False	NA	-3	True	GATAAA	-22	NA	43022408	42972721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_42973011_42980282_42980470_43001322_43001481_43022234
transcript_77005.nnic	chr2	-	551	3	NNC	ENSG00000224739.2	novel	237	3	NA	NA	-16278	28633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTTTTGGAGTAATTT	-1	True	NA	-3	True	GATAAA	-22	NA	43022338	42972721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_42973011_43001322_43001481_43022234
transcript_77006.nnic	chr2	-	545	3	NNC	ENSG00000230587.3	novel	1976	2	NA	NA	-5261	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACTTCCTCTGGGACAG	0	True	NA	NA	False	AATAAA	-27	NA	43137743	43097737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_43098041_43132369_43132481_43137612
transcript_77007.known	chr2	-	416	2	FSM	ENSG00000230587.3	ENST00000654095.1	416	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACTTCCTCTGGGACAG	5261	False	NA	NA	False	AATAAA	-27	NA	43132482	43097737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_43098041_43132369
transcript_77010.known	chr2	-	6091	38	FSM	ENSG00000115970.19	ENST00000405975.7	6091	38	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_18	12.7501127911481	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCCCCTACTTCT	-13	True	NA	-15	True	CATAAA	-19	NA	43596038	43230850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_77015.nic	chr2	-	3114	18	ISM	ENSG00000115970.19	ENST00000405975.7	6091	38	-36	321217	-36	0	5prime_fragment	FALSE	canonical	3	71	junction_17	11.4120679159233	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATCTGTGTATATTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	43596074	43552067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_77024.known	chr2	-	6939	16	FSM	ENSG00000115970.19	ENST00000403856.1	6939	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_15	30.9239928426672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGAAAGAAAAAACCA	18	True	NA	NA	False	AAGAAA	-40	NA	43596007	43562217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43592843_43592891_43595930
transcript_7703.nic	chr1	-	2021	4	ISM	ENSG00000137992.15	ENST00000370131.3	1521	8	-17	18619	-3	-18619	5prime_fragment	FALSE	canonical	3	63	junction_3	4.98887651569859	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGACAATTTGCTCAAT	-7	True	NA	NA	False	AAAAAG	-14	NA	100249837	100229161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_100230915_100235435_100235512_100240760_100240885_100249769
transcript_77036.nnic	chr2	+	540	3	NNC	ENSG00000234936.1	novel	398	3	NA	NA	-5268	64	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTAATGTGTCACA	445	False	NA	14	True	AATAAA	-23	NA	43224304	43233458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_43224427_43232763_43232902_43233178
transcript_77037.nnic	chr2	+	566	3	NNC	ENSG00000234936.1	novel	398	3	NA	NA	-5265	64	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	5.5	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTAATGTGTCACA	448	False	NA	14	True	AATAAA	-23	NA	43224307	43233458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_43224427_43232734_43232902_43233178
transcript_7704.nic	chr1	-	546	4	ISM	ENSG00000137992.15	ENST00000370131.3	1521	8	-28	20105	-14	-20105	5prime_fragment	FALSE	canonical	3	63	junction_3	4.98887651569859	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTTTTTTTTCT	4	True	NA	NA	False	ATTAAA	-14	NA	100249848	100230647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_100230915_100235435_100235512_100240760_100240885_100249769
transcript_77040.nnic	chr2	+	560	3	NNC	ENSG00000234936.1	novel	398	3	NA	NA	-2752	64	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTAATGTGTCACA	393	False	NA	14	True	AATAAA	-23	NA	43226820	43233458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_43226934_43232734_43232902_43233178
transcript_77041.nnic	chr2	+	516	3	NNC	ENSG00000234936.1	novel	398	3	NA	NA	-2737	64	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTAATGTGTCACA	-6	True	NA	14	True	AATAAA	-23	NA	43226835	43233458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_43226934_43232763_43232902_43233178
transcript_77043.known	chr2	+	6994	30	FSM	ENSG00000152527.14	ENST00000282406.9	6994	30	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_10	11.1022702309311	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGCATTATCTTTTGA	-31	True	NA	9	True	AATAAA	-17	NA	43637259	43767987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43637380_43644670_43644797_43678862_43678926_43692513_43692664_43694430_43694515_43695142_43695225_43697170_43697357_43699646_43700609_43703980_43704057_43706321_43706417_43707400_43707546_43709989_43710127_43710219_43710331_43710488_43710576_43712224_43712384_43720668_43720750_43726271_43726452_43729636_43729746_43731489_43731603_43738340_43738521_43740945_43741044_43742740_43742919_43743833_43743990_43745865_43745964_43753618_43753761_43757118_43757265_43758899_43759030_43762303_43762391_43764227_43764366_43765412
transcript_7705.known	chr1	-	2663	3	FSM	ENSG00000224616.4	ENST00000666916.1	2663	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAGTAACAAAATAGAAA	-1	True	NA	NA	False	ATTAAA	-25	NA	100266134	100262804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100265248_100265828_100265918_100266003
transcript_77050.known	chr2	+	1346	13	FSM	ENSG00000138036.18	ENST00000605786.5	1346	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	27.976552682559	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCTCTAACATGTTT	19	True	NA	12	True	AATAAA	-13	NA	43774081	43809997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_77052.known	chr2	+	1399	13	FSM	ENSG00000138036.18	ENST00000260605.12	1399	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	20.6033977780365	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTAAGTGGTATATAC	-24	True	NA	25	True	AATAAA	-26	NA	43774038	43810010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_77058.nic	chr2	+	1438	12	ISM	ENSG00000138036.18	ENST00000260605.12	1399	13	-36	4455	-36	0	5prime_fragment	FALSE	canonical	3	64	junction_6	21.2878733958798	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCTGCTGGAGAGACAT	NA	False	NA	37	True	ATTAAA	-19	NA	43774002	43805555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153
transcript_7706.known	chr1	-	3637	3	FSM	ENSG00000224616.4	ENST00000665523.1	3637	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAGATGCAGGAAAAGGA	-19	True	NA	NA	False	TTTAAA	-43	NA	100266152	100261862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100265248_100265814_100265918_100266003
transcript_7707.known	chr1	-	7681	2	FSM	ENSG00000224616.4	ENST00000670421.2	7697	2	16	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTATAACAATAATAAAAAA	13	True	NA	NA	False	NA	NA	NA	100266120	100258353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100265918_100266003
transcript_77072.known	chr2	+	2903	6	FSM	ENSG00000138036.18	ENST00000398823.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	48.3818147654674	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCATTTTATATTATC	1	True	NA	NA	False	AATAAA	-22	NA	43774063	43795183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43792675
transcript_77073.known	chr2	+	1133	6	FSM	ENSG00000138036.18	ENST00000406852.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	11.689311356962	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCAGCATTTTATAT	-14	True	NA	NA	False	AATAAA	-18	NA	43774048	43795179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456
transcript_77078.known	chr2	+	1253	11	FSM	ENSG00000138036.18	ENST00000378587.3	1253	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	21.772459668122	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCTGCTGGAGAGACAT	2725	False	NA	37	True	ATTAAA	-19	NA	43776822	43805555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153
transcript_77079.known	chr2	+	568	6	FSM	ENSG00000138036.18	ENST00000479242.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	46.7649441355381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGGAAGTAAATATGATG	-14	True	NA	NA	False	NA	NA	NA	43774048	43795930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43789632_43789722_43794456_43794644_43795889
transcript_77080.known	chr2	-	2541	24	FSM	ENSG00000138095.20	ENST00000682104.1	2541	24	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_23	321.548997874393	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTTCTCATGTTTTCCCC	NA	False	NA	-34	True	AATAAA	-13	NA	43996226	43942704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_43942804_43943686_43943895_43945331_43945418_43946112_43946244_43947256_43947371_43947730_43947776_43948121_43948200_43948411_43948519_43949601_43949660_43950572_43950601_43957384_43957452_43960540_43960635_43963587_43963707_43973606_43973715_43973794_43973901_43974149_43974296_43974613_43974759_43975090_43975218_43976142_43976230_43976993_43977053_43977154_43977277_43979825_43979949_43982237_43982435_43996139
transcript_77081.known	chr2	+	639	1	FSM	ENSG00000288707.1	ENST00000684747.1	639	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATAGTTTTAAAGCTGG	28	False	NA	NA	False	AATAAA	-17	NA	43995984	43996623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43996000_43996600
transcript_77082.known	chr2	+	3333	15	FSM	ENSG00000285542.1	ENST00000649044.1	3333	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	443.237308024144	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTATGTTGTGTACACA	NA	False	NA	NA	False	GGGGCT	-25	NA	44168850	44320310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44275503_44275966_44280715_44280896_44281386_44281542_44286031_44286158_44299970_44300091_44301002_44301128_44304142_44304339_44312585_44312754_44313834_44313952_44320198
transcript_77086.known	chr2	+	2608	6	FSM	ENSG00000138032.21	ENST00000282412.9	2608	6	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_5	157.618019274447	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	-16	True	NA	NA	False	AATAAA	-23	NA	44168874	44231472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44230412
transcript_77087.known	chr2	+	3877	6	FSM	ENSG00000138032.21	ENST00000378551.6	3877	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	239.276074859147	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGCCTGGCTATTCT	-14	True	NA	NA	False	AGTAAA	-35	NA	44168876	44234646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44232315
transcript_77089.known	chr2	+	1481	3	FSM	ENSG00000138032.21	ENST00000409486.6	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATTTAGAGA	-14	True	NA	NA	False	NA	NA	NA	44168876	44209432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44169275_44201185_44202046_44209209
transcript_7709.known	chr1	+	1534	12	FSM	ENSG00000137996.13	ENST00000260563.4	1534	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	84.8868960674552	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATACATTTTTCTTTT	22	True	NA	NA	False	AATAAA	-18	NA	100266248	100291771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100266421_100266523_100266625_100267499_100267539_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_77093.known	chr2	-	3080	15	FSM	ENSG00000138078.16	ENST00000410081.5	3080	15	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_14	58.6938181217944	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTTAAAGTTTTTGAATA	-19	True	NA	-124	True	GATAAA	-17	NA	44361806	44320921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361379
transcript_77095.known	chr2	-	5212	15	FSM	ENSG00000138078.16	ENST00000409936.5	5212	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	64.0376164963267	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTGTAATTTTATTT	-1	True	NA	-10	True	ATTAAA	-13	NA	44361494	44318765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360039_44361379
transcript_77098.known	chr2	-	3030	15	FSM	ENSG00000138078.16	ENST00000409272.5	3030	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	65.8856848593665	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTACTTTTAAACATTTT	-18	True	NA	-29	True	AATAAA	-23	NA	44361805	44320826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361523
transcript_771.known	chr1	-	1589	3	FSM	ENSG00000127054.22	ENST00000498173.2	1589	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	15.5	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTGAAACTTTAATT	NA	False	NA	-16	True	AATGAA	-15	NA	1324687	1318680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1319525_1320455_1321094_1324580
transcript_77104.known	chr2	-	5829	14	FSM	ENSG00000138078.16	ENST00000409411.6	5829	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	47.1748604197331	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	-1	True	NA	NA	False	ATTAAA	-19	NA	44361494	44317606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361379
transcript_77105.known	chr2	-	4703	14	FSM	ENSG00000138078.16	ENST00000409957.5	4703	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	55.3114901873522	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	0	True	NA	-7	True	ATTAAA	-16	NA	44361561	44318762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361416
transcript_77106.known	chr2	-	6049	14	FSM	ENSG00000138078.16	ENST00000541738.5	6049	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	52.2456645804762	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTCTCAATGT	NA	False	NA	NA	False	ATTAAA	-15	NA	44361862	44317610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361523
transcript_77115.nic	chr2	-	658	2	ISM	ENSG00000138078.16	ENST00000409936.5	5212	15	-85	40815	-18	-13282	5prime_fragment	FALSE	canonical	3	19	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCACCTAACCAAGTGTCT	-4	True	NA	NA	False	AATAAA	-11	NA	44361579	44359580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_44360039_44361379
transcript_77117.nic	chr2	-	290	2	ISM	ENSG00000138078.16	ENST00000438314.1	660	6	-53	16646	0	-14255	5prime_fragment	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATGGCCTTACATTTTAT	1	True	NA	NA	False	AATAAA	-21	NA	44361546	44360553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_44360677_44361379
transcript_77121.nnic	chr2	+	1365	10	NNC	ENSG00000143919.15	novel	594	8	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	116.391103134599	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	-7	True	NA	25	True	AATAAA	-29	NA	44676550	44772592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_44676776_44698388_44698454_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_77123.nic	chr2	+	1347	9	NIC	ENSG00000143919.15	novel	594	8	NA	NA	-90	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	65.9117544524495	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	NA	False	NA	25	True	AATAAA	-29	NA	44676503	44772592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_44676776_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_77125.nnic	chr2	+	1500	8	NNC	ENSG00000143919.15	novel	1512	11	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	126.156042022471	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	NA	False	NA	25	True	AATAAA	-29	NA	44361888	44772592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_44362146_44372715_44372889_44390240_44390306_44546932_44547110_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_7713.known	chr1	+	2526	11	FSM	ENSG00000137996.13	ENST00000370128.9	2526	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	24.1669195389069	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTCATTATTCTCTG	-11	True	NA	21	True	AATAAA	-21	NA	100266215	100292769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100266421_100266523_100266625_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_77131.nnic	chr2	+	1262	5	NNC	ENSG00000143919.15	novel	1512	11	NA	NA	-58	-38706	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	129.98172948534	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTATTTGAAAATTCTAA	NA	False	NA	NA	False	NA	NA	NA	44361888	44704951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_44362146_44372715_44372889_44390240_44390306_44505632_44505731_44704282
transcript_77136.nic	chr2	+	684	4	ISM	ENSG00000143919.15	ENST00000454433.5	843	7	-216	9072	-58	0	5prime_fragment	FALSE	canonical	3	18	junction_3	115.316954521007	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCGATGAGTACCTATAT	NA	False	NA	3	True	AATAAA	-16	NA	44361888	44392073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_44362146_44372715_44372889_44390240_44390306_44391884
transcript_77137.nic	chr2	+	750	4	ISM	ENSG00000143919.15	ENST00000454433.5	843	7	-216	9006	-58	66	5prime_fragment	FALSE	canonical	3	18	junction_3	115.316954521007	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGTCTTATACTATT	NA	False	NA	69	True	AATAAA	-20	NA	44361888	44392139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_44362146_44372715_44372889_44390240_44390306_44391884
transcript_77138.known	chr2	+	1114	4	FSM	ENSG00000143919.15	ENST00000403853.7	1114	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	121.836867253809	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGAGATGACTCT	10	True	NA	NA	False	AATAAA	-33	NA	44361963	44457261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44456567
transcript_77141.known	chr2	+	665	4	FSM	ENSG00000143919.15	ENST00000402247.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	114.386285114179	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCTAGAACAAAGACATAG	-4	True	NA	NA	False	NA	NA	NA	44361949	44549785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44549554
transcript_77144.nic	chr2	+	942	2	ISM	ENSG00000143919.15	ENST00000477830.1	553	7	-90	38705	-90	-38705	5prime_fragment	FALSE	canonical	3	93	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTGAAAATTCTAAA	NA	False	NA	NA	False	NA	NA	NA	44676503	44704952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_44676776_44704282
transcript_77145.known	chr2	+	1512	11	FSM	ENSG00000143919.15	ENST00000378494.8	1512	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	34.2549266529648	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	-7	True	NA	25	True	AATAAA	-29	NA	44361946	44772592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_77146.known	chr2	-	910	2	FSM	ENSG00000259439.3	ENST00000432125.2	910	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCAGTATGGTTGGA	6991	False	NA	NA	False	NA	NA	NA	44935644	44923034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44923580_44935279
transcript_77147.known	chr2	-	844	2	FSM	ENSG00000236502.2	ENST00000419364.2	887	2	43	0	43	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCCTTTCCAGAAGAAAA	762	False	NA	NA	False	AATAAA	-20	NA	44941873	44940153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44940834_44941709
transcript_77148.known	chr2	-	557	2	FSM	ENSG00000236502.2	ENST00000456467.2	987	2	0	430	0	-430	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCTAATTTCTCTAGG	4	True	NA	NA	False	NA	NA	NA	44941494	44940583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44940834_44941187
transcript_77149.known	chr2	+	461	1	FSM	ENSG00000231848.1	ENST00000423051.1	461	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGAATGTTCAATAAAGT	NA	False	NA	NA	False	NA	NA	NA	44996412	44996873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44996400_44996900
transcript_77152.known	chr2	-	3667	21	FSM	ENSG00000068784.13	ENST00000263736.5	3667	21	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_20	15.011662133155	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTGCTATGTTGA	-10	True	NA	-6	True	AATAAA	-17	NA	45611267	45388679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_45389600_45392944_45393130_45413113_45413294_45418364_45418542_45419787_45419895_45476992_45477076_45488239_45488332_45546731_45546840_45547521_45547613_45551124_45551283_45553622_45553731_45562652_45562757_45573206_45573343_45574626_45574724_45579874_45580014_45581692_45581811_45585607_45585775_45599448_45599836_45601902_45602084_45605361_45605442_45611218
transcript_77158.nnic	chr2	-	1747	6	NNC	ENSG00000068784.13	novel	3667	21	NA	NA	-15991	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	57.0249068390296	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTGCTATGTTGA	NA	False	NA	-6	True	AATAAA	-17	NA	45464086	45388679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_45389600_45392944_45393130_45413113_45413294_45418364_45418542_45419787_45419895_45463908
transcript_77162.nic	chr2	-	612	4	ISM	ENSG00000068784.13	ENST00000263736.5	3667	21	-66	210920	-66	2322	5prime_fragment	FALSE	canonical	3	112	junction_3	23.1564725772779	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGAGAATGACGATG	NA	False	NA	NA	False	NA	NA	NA	45611333	45599599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_45599836_45601902_45602084_45605361_45605442_45611218
transcript_77178.known	chr2	+	4780	5	FSM	ENSG00000119729.12	ENST00000238738.9	4780	5	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_2	8.7571399440685	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTCAGGCTTTGTAC	-25	True	NA	17	True	ATTAAA	-28	NA	46542489	46584688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_46543189_46543753_46543813_46576086_46576252_46576560_46576657_46580927
transcript_77179.known	chr2	+	6323	5	FSM	ENSG00000119878.6	ENST00000238892.4	6323	5	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_1	23.6577154433813	1583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATCTTTTTCATATT	2	True	NA	NA	False	NA	NA	NA	46617214	46630176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_46617299_46618772_46618839_46619626_46619682_46623763_46623868_46624162
transcript_7718.nnic	chr1	+	490	2	Antisense	novelGene_ENSG00000215871.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCCTGAGTTTGGTGG	NA	False	NA	NA	False	AATAAA	-20	NA	100325656	100337317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_100325854_100337024
transcript_77188.nnic	chr2	-	776	5	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	59	junction_4	135.916104638119	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	36	False	NA	NA	False	AATAAA	-15	NA	46617120	46581284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46616969
transcript_77191.nnic	chr2	-	671	4	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_3	163.976285548314	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	49	False	NA	NA	False	AATAAA	-15	NA	46617107	46581284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46616969
transcript_77193.known	chr2	-	1061	7	FSM	ENSG00000151665.13	ENST00000306465.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	141.106835018325	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-6	True	NA	NA	False	AATAAA	-15	NA	46617051	46581284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46581592_46588074_46588180_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_77195.known	chr2	+	5095	20	FSM	ENSG00000068724.17	ENST00000319190.11	5095	20	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_12	12.684319719993	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGCTCATTTACACAGAA	-20	True	NA	18	True	ATTAAA	-15	NA	46941223	47076123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_46941726_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_772.known	chr1	-	896	4	FSM	ENSG00000127054.22	ENST00000493534.6	896	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	230.213427545446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAACCCACCAGGCTCT	-1	True	NA	NA	False	NA	NA	NA	1324658	1319059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1319706_1320455_1320530_1320995_1321094_1324580
transcript_7720.known	chr1	+	3101	9	FSM	ENSG00000162692.12	ENST00000294728.7	3101	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTATGTTTATTTATT	0	True	NA	NA	False	AGTAAA	-23	NA	100719741	100739045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100719925_100720475_100720752_100723019_100723341_100724623_100724891_100729106_100729383_100731197_100731519_100732417_100732685_100734501_100734769_100738122
transcript_77202.known	chr2	+	3033	21	FSM	ENSG00000068724.17	ENST00000409245.5	3033	21	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	24.7678723349423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAGCTGCAGCCCTCGT	28	False	NA	1	True	AATACA	-16	NA	46916156	47074048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_46916578_46917183_46917278_46950362_46950527_46956838_46957008_46974972_46975104_46978791_46978908_46993449_46993529_46994356_46994515_46995135_46995200_47005921_47006060_47006640_47006725_47011330_47011436_47021861_47021980_47023407_47023466_47024286_47024360_47029223_47029385_47046314_47046432_47049948_47050047_47051745_47051881_47060768_47060972_47073701
transcript_77203.known	chr2	-	821	5	FSM	ENSG00000180398.13	ENST00000409973.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	352.693209461141	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGCTATTAAATAC	-30	True	NA	40	True	AATGAA	-29	NA	46915810	46905270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46910779_46910874_46915722
transcript_77206.known	chr2	-	3978	4	FSM	ENSG00000180398.13	ENST00000649435.1	3978	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	303.33589742506	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTATTCTTGTA	19	True	NA	-98	True	NA	NA	NA	46915761	46901966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905591_46907809_46907970_46909022_46909178_46915722
transcript_77207.known	chr2	-	1113	4	FSM	ENSG00000180398.13	ENST00000409207.5	1113	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	329.08053725494	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGGTCTCTCCCACAA	-2	True	NA	NA	False	NA	NA	NA	46941732	46904957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46941571
transcript_77217.known	chr2	-	3975	3	FSM	ENSG00000180398.13	ENST00000409913.5	3975	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	319.5	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAGCAGTTGATTTTGT	237	False	NA	-5	True	AATAAA	-16	NA	46915816	46901873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46915722
transcript_77218.known	chr2	-	671	3	FSM	ENSG00000180398.13	ENST00000409147.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	361	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAGCATTTTGGTAAAA	2105	False	NA	1	True	NA	NA	NA	46941855	46905367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46941571
transcript_77219.known	chr2	-	665	3	FSM	ENSG00000180398.13	ENST00000477791.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_2	50.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTAGTTCTACGTACTCA	-11	True	NA	NA	False	ATTAAA	-27	NA	46915791	46907528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46907970_46909022_46909178_46915722
transcript_77220.known	chr2	-	568	3	FSM	ENSG00000180398.13	ENST00000479225.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	340.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCACTGGGCATGATGGCT	16	True	NA	NA	False	NA	NA	NA	46941714	46907699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46907970_46909022_46909178_46941571
transcript_77222.known	chr2	-	807	2	FSM	ENSG00000180398.13	ENST00000493804.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAATCTCATGTCCTCA	-9	True	NA	NA	False	NA	NA	NA	46915789	46904854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46915722
transcript_77226.known	chr2	-	648	4	FSM	ENSG00000180398.13	ENST00000409218.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	331.43559790034	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAATAACTCATTTCCA	NA	False	NA	-25	True	NA	NA	NA	46916112	46905393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46915980
transcript_77227.known	chr2	-	983	9	FSM	ENSG00000273269.3	ENST00000422269.1	983	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3831.66210467142	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGGGACCAGGAAACTC	1	True	NA	NA	False	AAGAAA	-27	NA	47176511	47065940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47066138_47090269_47090375_47121012_47121154_47129940_47129996_47130195_47130261_47151257_47151516_47152956_47153017_47170733_47170765_47176440
transcript_77228.known	chr2	-	1165	7	FSM	ENSG00000143933.20	ENST00000456319.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	4782.40425646162	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATTTACCCAATGGT	-4	True	NA	23	True	AATAAA	-4	NA	47176516	47160179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47172413_47172460_47176440
transcript_77229.known	chr2	-	1076	6	FSM	ENSG00000143933.20	ENST00000655728.1	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	4120.55232220148	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTACACTATTTTTTTG	289	False	NA	-60	True	NA	NA	NA	47176223	47160338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176031
transcript_77230.known	chr2	-	1294	6	FSM	ENSG00000143933.20	ENST00000656538.1	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	4117.76752136397	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTGTTTTCCAATA	1	True	NA	-2	True	NA	NA	NA	47176511	47160204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176235
transcript_77236.known	chr2	-	1242	6	FSM	ENSG00000143933.20	ENST00000652974.1	1242	6	0	0	0	0	multi-exon	FALSE	canonical	3	9554	junction_1	684.268777601317	32471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTCTGCATCTGAGT	NA	False	NA	-12	True	AATAAA	-20	NA	47176623	47160163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
transcript_77237.known	chr2	-	1126	6	FSM	ENSG00000143933.20	ENST00000655450.1	1126	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4123.33714362529	1980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATGGTTGCTCTGCAT	NA	False	NA	-18	True	AATAAA	-14	NA	47176921	47160169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176848
transcript_77238.known	chr2	-	1004	5	FSM	ENSG00000143933.20	ENST00000432899.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4681.98440834653	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAATGGTTGCTCTGC	12	False	NA	-20	True	AATAAA	-12	NA	47176500	47160171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162518_47162663_47170733_47170765_47176440
transcript_77242.known	chr2	-	1046	4	FSM	ENSG00000234690.7	ENST00000413185.2	1046	4	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCACAATAAATGTAATGT	7	True	NA	NA	False	AATAAA	-1	NA	47344989	47331379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47332108_47332272_47332409_47332933_47333027_47344900
transcript_77244.nnic	chr2	-	941	2	NNC	ENSG00000234690.7	novel	1892	3	NA	NA	82227	-6625	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGTCTATGGAATGCC	NA	False	NA	NA	False	AATATA	-23	NA	47228181	47220602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_47221324_47227961
transcript_77246.known	chr2	+	200	1	FSM	ENSG00000236824.2	ENST00000418539.2	200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTCTTGCCTGGAAGA	0	True	NA	NA	False	NA	NA	NA	47335314	47335514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47335300_47335500
transcript_77247.known	chr2	+	1530	10	FSM	ENSG00000119888.11	ENST00000405271.5	1530	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1019.18845711238	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTTCCACAGTAAAATC	9843	False	NA	-1	True	ATTAAA	-1	NA	47345157	47386900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47345224_47368927_47369236_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_77251.known	chr2	+	1547	9	FSM	ENSG00000119888.11	ENST00000263735.9	1547	9	0	0	0	0	multi-exon	FALSE	canonical	3	2083	junction_2	174.182689653708	2734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAACTTTGACATTTC	7	True	NA	15	True	AATAAA	-16	NA	47369310	47387020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47369582_47373462_47373571_47373807_47374049_47375233_47375300_47377013_47377078_47378952_47379055_47379768_47379970_47385165_47385211_47386571
transcript_77263.known	chr2	+	3115	16	FSM	ENSG00000095002.15	ENST00000233146.7	3115	16	0	0	0	0	multi-exon	FALSE	canonical	3	1229	junction_10	175.624903321444	2860	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	0	True	NA	30	True	AATAAA	-19	NA	47403155	47483223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_77264.known	chr2	-	531	1	FSM	ENSG00000230979.3	ENST00000456046.1	531	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	889	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGGGCCCTCGCCCGGG	37	False	NA	-61	True	NA	NA	NA	47691246	47690715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47690700_47691200
transcript_77265.known	chr2	+	7669	12	FSM	ENSG00000116062.18	ENST00000652107.1	7669	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	622.528037139528	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTATTCTATCCCAATA	NA	False	NA	NA	False	AATACA	-6	NA	47695818	47810063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47696098_47708182_47708431_47737390_47737507_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_77267.known	chr2	+	3959	10	FSM	ENSG00000116062.18	ENST00000673637.1	3959	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	471.803029627229	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTATGATCTAATAAAC	-2	True	NA	-18	True	NA	NA	NA	47783150	47806915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47783232_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_77269.known	chr2	+	4055	10	FSM	ENSG00000116062.18	ENST00000538136.1	4055	10	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	580.953388410957	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	773	False	NA	12	True	AATAAA	-12	NA	47783954	47806945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47784106_47790926_47791124_47795893_47796064_47798614_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_77282.known	chr2	+	491	3	FSM	ENSG00000116062.18	ENST00000420813.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCCAGAAGAGGAAGAAGA	773	False	NA	27	True	NA	NA	NA	47783954	47796036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47784106_47790926_47791124_47795893
transcript_77284.known	chr2	+	2219	2	FSM	ENSG00000116062.18	ENST00000607272.2	2219	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCTATGATGTTTCA	NA	False	NA	NA	False	AATAAA	-29	NA	47695529	47709833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47696098_47708182
transcript_77287.known	chr2	+	548	4	FSM	ENSG00000116062.18	ENST00000411819.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	433.230500619089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAGATTCTGAGAGTGA	999	False	NA	NA	False	AATAAA	-14	NA	47784180	47798733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47784239_47790926_47791124_47795893_47796064_47798610
transcript_77288.known	chr2	-	4760	23	FSM	ENSG00000138081.22	ENST00000403359.8	4760	23	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_22	34.9384642048235	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTGAATTTACCACC	-3	True	NA	-14	True	AATAAA	-17	NA	47906498	47806919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47808248_47808328_47808428_47809157_47809267_47809599_47809708_47810315_47810427_47813233_47813378_47813790_47813868_47818778_47818865_47818955_47819079_47820361_47820457_47822217_47822304_47823142_47823361_47832348_47832487_47832571_47832679_47832768_47832881_47832963_47833071_47834578_47834712_47834787_47834872_47835871_47836002_47838858_47839004_47839418_47839501_47839641_47839770_47905488
transcript_77290.known	chr2	+	656	2	FSM	ENSG00000233230.2	ENST00000417692.2	1041	2	19	366	12	154	multi-exon	FALSE	canonical	3	15	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGATGATCTCTCT	13	False	NA	NA	False	NA	NA	NA	47906829	47907810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47906993_47907317
transcript_77295.known	chr2	-	963	3	FSM	ENSG00000230773.9	ENST00000661667.1	963	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTTGTTCTAAGTTGT	1486	False	NA	NA	False	AATATA	-34	NA	48314185	48242803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_48243620_48313689_48313765_48314113
transcript_77297.nnic	chr2	+	675	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGCTCCACGTTGATT	438	False	NA	NA	False	AAAACA	-4	NA	48047317	48090334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_48047765_48090106
transcript_77299.nnic	chr2	+	840	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCATGTTGATTATTTAG	438	False	NA	NA	False	NA	NA	NA	48047317	48090499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_48047765_48090106
transcript_773.known	chr1	-	579	4	FSM	ENSG00000127054.22	ENST00000525285.1	579	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	218.162528608579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGACTGTGTGATCATT	44	False	NA	NA	False	NA	NA	NA	1324613	1320477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1320530_1320995_1321094_1322891_1323288_1324580
transcript_77301.nnic	chr2	+	915	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATTAGGTATGCAAAAG	438	False	NA	NA	False	ATTAAA	-21	NA	48047317	48090574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_48047765_48090106
transcript_77303.nnic	chr2	+	1794	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACATTATTTGTTGAA	438	False	NA	NA	False	AATAAA	-2	NA	48047317	48091453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_48047765_48090106
transcript_77307.known	chr2	+	5437	7	FSM	ENSG00000170802.17	ENST00000340553.8	5437	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	23.5984933605705	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	-11	True	NA	10	True	AATAAA	-19	NA	48314681	48379295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_48314815_48328560_48328703_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
transcript_77311.nic	chr2	+	561	2	ISM	ENSG00000170802.17	ENST00000413569.5	932	5	-48	26793	-48	-26793	5prime_fragment	FALSE	canonical	3	76	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCGACTTCAAAGCCCCC	NA	False	NA	NA	False	NA	NA	NA	48314588	48346535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_48314815_48346200
transcript_77313.known	chr2	-	555	1	FSM	ENSG00000272663.1	ENST00000609028.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTATGTGGATACTG	NA	False	NA	NA	False	AATAAA	-36	NA	48440597	48440042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_48440000_48440600
transcript_77315.known	chr2	+	3208	22	FSM	ENSG00000162869.16	ENST00000416913.5	3208	22	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	24.151261803724	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTCTCTCTATTAA	-32	True	NA	7	True	AATAAA	-17	NA	48440768	48515385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_77317.known	chr2	+	3173	22	FSM	ENSG00000162869.16	ENST00000294952.13	3173	22	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	14.8897688168588	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	-35	True	NA	8	True	AATAAA	-18	NA	48440765	48515386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_77328.nic	chr2	+	1334	11	ISM	ENSG00000162869.16	ENST00000281394.8	3137	21	22	43936	22	0	5prime_fragment	FALSE	canonical	3	92	junction_2	16.7403703662733	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGATCTGCCTGAC	-10	True	NA	22	True	AATAAA	-14	NA	48440790	48471450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278
transcript_7733.known	chr1	-	2825	5	FSM	ENSG00000162694.14	ENST00000370114.8	2825	5	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_4	41.7933906257915	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-2	True	NA	-25	True	AATAAA	-15	NA	100894842	100872390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632
transcript_77331.nic	chr2	+	1568	7	ISM	ENSG00000162869.16	ENST00000281394.8	3137	21	22	53443	22	7215	5prime_fragment	FALSE	canonical	3	92	junction_2	16.4282953738021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGCAGTTTGATTTA	-10	True	NA	NA	False	AAAAAG	-17	NA	48440790	48461943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137
transcript_77335.nnic	chr2	+	629	4	NNC	ENSG00000068781.21	novel	315	2	NA	NA	-76395	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAATAAAAATAAAGAAG	2	True	NA	NA	False	NA	NA	NA	48692558	48776481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_48692713_48767111_48767271_48768960_48769075_48776279
transcript_77336.nnic	chr2	+	470	3	NNC	ENSG00000068781.21	novel	315	2	NA	NA	-76395	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAATAAAAATAAAGAAG	2	True	NA	NA	False	NA	NA	NA	48692558	48776481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_48692713_48768960_48769075_48776279
transcript_77338.known	chr2	+	5529	4	FSM	ENSG00000243244.7	ENST00000404752.6	5529	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7.36357401145817	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTACTGTGCTGTGAATT	-15	True	NA	14	True	ATTAAA	-17	NA	48530153	48598513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_48530217_48580586_48582564_48591652_48591856_48595227
transcript_7734.known	chr1	-	2835	5	FSM	ENSG00000162694.14	ENST00000370113.7	2835	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	119.742431911165	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCTGTGTTAACTAAG	-16	True	NA	-21	True	AATAAA	-19	NA	100894812	100872386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888865_100894632
transcript_77342.known	chr2	-	1164	4	FSM	ENSG00000179915.25	ENST00000625891.2	1164	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.37704215656966	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTCAGACACAATCCAATT	-13	False	NA	-1	True	CATAAA	-20	NA	50656410	50619294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_50619969_50620054_50620184_50623313_50623616_50656351
transcript_77344.known	chr2	-	464	2	FSM	ENSG00000179915.25	ENST00000496792.3	464	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCATGTGTTTTTCTT	4793	False	NA	NA	False	ATTAAA	-20	NA	51027798	50922520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_50922688_51027501
transcript_77345.nnic	chr2	-	980	2	NIC	ENSG00000179915.25	novel	1164	4	NA	NA	-247	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGACACAATCCAATTTC	NA	False	NA	1	True	CATAAA	-22	NA	50623617	50619292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_50619969_50623313
transcript_77347.nnic	chr2	-	638	2	NIC	ENSG00000179915.25	novel	1164	4	NA	NA	-247	10	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAAAGCAATTAGCCT	NA	False	NA	NA	False	ATTAAA	-9	NA	50623617	50619634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_50619969_50623313
transcript_77349.nic	chr2	-	1238	2	ISM	ENSG00000179915.25	ENST00000626899.1	2543	6	91	108652	-2	-48	5prime_fragment	FALSE	canonical	3	12	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGATAAAGGAGGGCAC	-8	True	NA	NA	False	AAAAAG	-1	NA	51032445	51028421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_51029195_51031980
transcript_77352.nnic	chr2	+	1439	3	NNC	ENSG00000231918.1	novel	3939	11	NA	NA	1305347	-56335	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAATTGTTTTTTTATAA	NA	False	NA	6	True	AATAAA	-23	NA	52337947	52351582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_52338097_52349324_52349451_52350418
transcript_77366.known	chr2	-	2226	10	FSM	ENSG00000115239.24	ENST00000263634.8	2226	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	25.6851785094386	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGCTTTTTTTTTTT	-1	True	NA	-5	True	ATTAAA	-16	NA	53786953	53669979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786820
transcript_77368.known	chr2	-	1910	10	FSM	ENSG00000115239.24	ENST00000482829.5	1910	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	78.3468073518138	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTGTAAACATCACTT	NA	False	NA	NA	False	AGTAAA	-19	NA	53768246	53670297	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53768111
transcript_77371.known	chr2	-	1734	9	FSM	ENSG00000115239.24	ENST00000394717.3	1734	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	77.3397536846349	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-7	True	NA	NA	False	NA	NA	NA	53787009	53670318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53786820
transcript_77381.nnic	chr2	-	1102	4	NNC	ENSG00000115239.24	novel	623	3	NA	NA	8	-4324	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_1	93.6269192059634	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTGTGTGTCTTTA	1	True	NA	-1	True	NA	NA	NA	53787001	53733784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_53734338_53750782_53750942_53765376_53765586_53786820
transcript_77387.known	chr2	+	1309	3	FSM	ENSG00000143942.5	ENST00000295304.5	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_2	11	955	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTAGTCTGTCATTCAC	-13	True	NA	17	True	CATAAA	-28	NA	53767803	53775196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53768022_53771906_53771943_53774141
transcript_7739.known	chr1	-	3146	4	FSM	ENSG00000162694.14	ENST00000535414.5	3146	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	150.645278717921	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGACTCATGTTTTT	-17	True	NA	-6	True	AATAAA	-34	NA	100895179	100872371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100874431_100877475_100877904_100888752_100888865_100894632
transcript_77396.known	chr2	+	2446	14	FSM	ENSG00000068912.15	ENST00000185150.9	2446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	110.932145153704	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCATGTAGTCAATG	-14	True	NA	22	True	AATAAA	-14	NA	53787043	53818796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_77403.known	chr2	+	2271	13	FSM	ENSG00000068912.15	ENST00000378239.5	2271	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	131.810127540422	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTAAATTTCTTTATT	22	True	NA	45	True	AATAAA	-37	NA	53787079	53818819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_77418.nic	chr2	+	706	5	ISM	ENSG00000068912.15	ENST00000690769.1	2759	8	-26	5737	-14	1544	5prime_fragment	FALSE	canonical	3	368	junction_2	12.9687123493429	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGTCTACCCAGTGAT	490	False	NA	NA	False	AAAAAG	-1	NA	53786994	53797795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731
transcript_77420.nic	chr2	+	444	2	FSM	ENSG00000068912.15	ENST00000494373.2	2214	2	-71	1841	-14	-1841	multi-exon	FALSE	canonical	3	385	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATGCATACTTCCCCT	490	False	NA	NA	False	TATAAA	-43	NA	53786994	53794410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53787373_53794344
transcript_77421.known	chr2	-	2094	2	FSM	ENSG00000119737.6	ENST00000394705.3	2094	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCCTCAGTCTTTTGT	4	True	NA	NA	False	NA	NA	NA	53859967	53852911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_53854866_53859827
transcript_77422.known	chr2	-	7250	47	FSM	ENSG00000068878.15	ENST00000404125.6	7250	47	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_42	51.0730971024575	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGCTTTTGTCTTCAT	0	True	NA	-4	True	AATAAA	-15	NA	53970993	53864068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_53865574_53866084_53866224_53866746_53866881_53869375_53869539_53874338_53874495_53875626_53875756_53885689_53885776_53887258_53887468_53887857_53887990_53888720_53888813_53890103_53890209_53892807_53892961_53893673_53893800_53895006_53895077_53895582_53895737_53896803_53896886_53897869_53898000_53898300_53898355_53899880_53900018_53901349_53901560_53904024_53904157_53906597_53906694_53906805_53906869_53908319_53908419_53908509_53908566_53908783_53908841_53910074_53910131_53919150_53919247_53920192_53920351_53920888_53921105_53922516_53922585_53923048_53923119_53923320_53923420_53925538_53925690_53925958_53926024_53927393_53927484_53928116_53928304_53931834_53932101_53932667_53932761_53934604_53934728_53936086_53936162_53936763_53936828_53937390_53937541_53939955_53940001_53948420_53948538_53949142_53949284_53970542
transcript_77427.known	chr2	+	1262	7	FSM	ENSG00000170634.13	ENST00000607452.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	24.936029266015	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	-2	True	NA	NA	False	CATAAA	-26	NA	53971112	54305300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54135452_54135470_54138638_54138749_54304687
transcript_77431.known	chr2	+	1115	5	FSM	ENSG00000170634.13	ENST00000422521.2	1115	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	31.9873021682042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACACATCCCTCCATAC	-7	True	NA	NA	False	AATAAA	-17	NA	53971107	54066047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54065459
transcript_77432.nnic	chr2	+	919	5	NIC	ENSG00000170634.13	novel	1262	7	NA	NA	-23	-107	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	29.3300187521249	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATATACTGTTGTCTA	-30	True	NA	9	True	AATAAA	-20	NA	53971084	54305144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_53971322_53973712_53973811_54135452_54135470_54138638_54138749_54304687
transcript_77435.known	chr2	+	993	4	FSM	ENSG00000170634.13	ENST00000394666.7	993	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	16.7597401199687	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	38	False	NA	NA	False	CATAAA	-26	NA	54115503	54305300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_54115757_54135452_54135470_54138638_54138749_54304687
transcript_77436.known	chr2	+	713	3	FSM	ENSG00000170634.13	ENST00000606082.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	40.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATGCTTCCCAGTGAG	58	False	NA	NA	False	AATAAA	-19	NA	53970837	53975376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53971322_53973712_53973811_53975245
transcript_77438.nic	chr2	+	289	2	ISM	ENSG00000170634.13	ENST00000606082.5	713	3	247	1612	-23	-1612	5prime_fragment	FALSE	canonical	3	87	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-30	True	NA	11	True	AATAAA	-22	NA	53971084	53973764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_53971322_53973712
transcript_77440.nic	chr2	+	1314	8	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-61	39978	-61	-6874	5prime_fragment	FALSE	canonical	3	387	junction_1	43.4229319646677	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTGAAAAGTATGAATCA	307	False	NA	NA	False	NA	NA	NA	54558332	54622330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299
transcript_77443.nic	chr2	+	917	4	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-61	46066	-61	-12962	5prime_fragment	FALSE	canonical	3	387	junction_1	59.1175852762009	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAATCTGCCAAGGA	307	False	NA	NA	False	NA	NA	NA	54558332	54616242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206
transcript_77444.known	chr2	+	9075	31	FSM	ENSG00000115306.16	ENST00000333896.5	9075	31	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	135.611721060124	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTTGTTTTCTTGGTT	19	True	NA	19	True	ATTAAA	-20	NA	54558393	54662308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913_54655999_54657849_54658047_54659153_54659267_54659935
transcript_77450.known	chr2	-	2390	8	FSM	ENSG00000115310.19	ENST00000357732.8	2390	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	610.243511114328	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-11	True	NA	-5	True	AATAAA	-17	NA	55050544	54972188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55028163_55028221_55049744
transcript_77454.nic	chr2	-	1676	7	NIC	ENSG00000115310.19	novel	2333	7	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_6	517.613567785424	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	1569	False	NA	-5	True	AATAAA	-17	NA	55049700	54972188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049557
transcript_77458.nnic	chr2	-	1667	7	NIC	ENSG00000115310.19	novel	4161	9	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	527.928472638313	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	0	True	NA	-5	True	AATAAA	-17	NA	55050561	54972188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55050427
transcript_7746.known	chr1	-	440	3	FSM	ENSG00000162694.14	ENST00000494907.1	440	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAATGGAAGAAGCTTAC	6	True	NA	NA	False	AATAAA	-23	NA	100894681	100885597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100885913_100888752_100888829_100894632
transcript_77462.nic	chr2	-	1068	7	NIC	ENSG00000115310.19	novel	1898	7	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	2	28	junction_6	517.613567785424	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTTTCAGTTTGTGCA	1569	False	NA	20	True	NA	NA	NA	55049700	54972796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049557
transcript_77471.known	chr2	-	860	2	FSM	ENSG00000115310.19	ENST00000491592.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	1307	junction_1	0	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTTTTCAGTTTGTGCAC	8565	False	NA	21	True	NA	NA	NA	54974019	54972795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_54973199_54973562
transcript_7749.known	chr1	-	678	2	FSM	ENSG00000162694.14	ENST00000480774.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCCATTCATCTGTCA	-9	True	NA	NA	False	NA	NA	NA	100894805	100888323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100888829_100894632
transcript_77490.known	chr2	+	705	6	FSM	ENSG00000143947.15	ENST00000402285.7	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_1	6103.88383244635	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACATGAACTAAC	NA	False	NA	10	True	NA	NA	NA	55231902	55235588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55232109_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_77499.known	chr2	-	596	3	FSM	ENSG00000162994.16	ENST00000494539.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTGAAATATTTATAC	5	True	NA	5	True	AATAAA	-31	NA	55232303	55175638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55175987_55177601_55177782_55232235
transcript_775.known	chr1	-	1171	4	FSM	ENSG00000162576.17	ENST00000474033.5	1171	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	19.3620476419435	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCAGGTATGCTTCT	7533	False	NA	-11	True	AATAAA	-21	NA	1354264	1352688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192
transcript_7750.known	chr1	+	429	1	FSM	ENSG00000273204.1	ENST00000609247.1	429	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTTAACAGCCTTTAT	13	False	NA	8	True	ATTAAA	-17	NA	100894927	100895356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100894900_100895400
transcript_77502.known	chr2	+	422	5	FSM	ENSG00000143947.15	ENST00000449323.5	422	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5256.4727241754	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGAGCCAGTTAAAGGG	56	False	NA	NA	False	NA	NA	NA	55232431	55234959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55232519_55232807_55232873_55233362_55233418_55234118_55234205_55234830
transcript_77503.known	chr2	+	785	6	FSM	ENSG00000143947.15	ENST00000272317.11	785	6	0	0	0	0	multi-exon	FALSE	canonical	1	5160	junction_3	4046.06468559266	120000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTGTGTTTCTGTCC	-11	True	NA	5	True	AATATA	-2	NA	55232687	55235853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_77504.known	chr2	+	1159	4	FSM	ENSG00000143947.15	ENST00000495843.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	1	5160	junction_2	4916.23042132441	4933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTGGGTTTTATTG	96	False	NA	-29	True	AATAAA	-16	NA	55232794	55235609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55232873_55233362_55233418_55234118_55234963_55235427
transcript_77516.known	chr2	-	2536	16	FSM	ENSG00000085760.15	ENST00000263629.9	2536	16	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_13	27.0871843415951	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	0	True	NA	24	True	ATTAAA	-42	NA	55269231	55236594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_7752.known	chr1	+	7898	12	FSM	ENSG00000162695.12	ENST00000370112.8	7898	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_11	23.6615250690872	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTGAATTGTGTCTTA	-31	True	NA	8	True	AATAAA	-18	NA	100896075	100981753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809_100974903_100975218
transcript_77527.known	chr2	-	2386	15	FSM	ENSG00000085760.15	ENST00000403721.5	2386	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	50.389351401798	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	-12	True	NA	24	True	ATTAAA	-42	NA	55269243	55236594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55269168
transcript_77559.known	chr2	-	2316	13	FSM	ENSG00000115355.18	ENST00000647517.1	2316	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	19.3749551970808	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGCAAGATTGAATTTG	126	False	NA	NA	False	AAAAAG	-44	NA	55419815	55335015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_7756.known	chr1	+	8204	11	FSM	ENSG00000162695.12	ENST00000357650.9	8204	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	18.5698680663057	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATTGTGTCTTATCAG	-17	True	NA	12	True	AATAAA	-22	NA	100896089	100981757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809
transcript_77563.known	chr2	+	626	2	FSM	ENSG00000162997.15	ENST00000579162.1	626	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTATCCTTAGTTTGGT	NA	False	NA	55	True	TATAAA	-23	NA	55282328	55284522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55282435_55284002
transcript_77564.known	chr2	+	2154	1	FSM	ENSG00000162997.15	ENST00000563365.1	2154	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTCTTATTTGTAA	NA	False	NA	5	True	AATAAA	-14	NA	55282318	55284472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55282300_55284500
transcript_77566.known	chr2	+	1184	10	FSM	ENSG00000163001.12	ENST00000349456.9	1184	10	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	16.3850277937655	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	44	True	NA	21	True	AATAAA	-21	NA	55519717	55545079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219_55544370_55544906
transcript_77568.known	chr2	+	1125	10	FSM	ENSG00000163001.12	ENST00000407816.7	1125	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	85.9056329804849	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	16	True	NA	21	True	AATAAA	-21	NA	55519689	55545079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55544024_55544075_55544219_55544370_55544906
transcript_77578.known	chr2	+	1575	8	FSM	ENSG00000163001.12	ENST00000406691.7	1575	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	90.7993976425224	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTTTTGACAATTATG	-28	True	NA	NA	False	AAGAAA	-13	NA	55519645	55539543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55538764
transcript_77583.known	chr2	+	759	6	FSM	ENSG00000163001.12	ENST00000403007.4	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	17.4287119432275	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGTATGTCGTGCAT	57	True	NA	NA	False	AATATA	-7	NA	55519730	55535914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711
transcript_77593.known	chr2	+	465	1	FSM	ENSG00000272606.1	ENST00000608113.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGAAAGTAAGTCTGCT	-11	True	NA	30	True	AATACA	-22	NA	55617908	55618373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55617900_55618400
transcript_77594.known	chr2	-	4310	16	FSM	ENSG00000275052.5	ENST00000616288.4	4310	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	94.6019497097649	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	3	True	NA	NA	False	ATTAAA	-20	NA	55617608	55548377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_77595.known	chr2	-	2981	3	FSM	ENSG00000275052.5	ENST00000612688.1	2981	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	192.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATTATTACAAAGTCT	-6	True	NA	NA	False	AATAAA	-17	NA	55618880	55614175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55615507_55617143_55617979_55618065
transcript_77598.known	chr2	-	4549	28	FSM	ENSG00000138035.15	ENST00000447944.7	4549	28	0	0	0	0	multi-exon	FALSE	canonical	2	265	junction_9	47.0959094970893	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGACTATTATTTAATAA	-7	True	NA	0	True	ATTAAA	-23	NA	55693844	55634060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_776.known	chr1	-	846	3	FSM	ENSG00000162576.17	ENST00000478517.5	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTCGTCGGGGGCTGG	7550	False	NA	NA	False	NA	NA	NA	1354247	1353214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1353929_1354029_1354107_1354192
transcript_77610.nnic	chr2	-	1551	12	NNC	ENSG00000138035.15	novel	583	6	NA	NA	-4	8980	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	122.870421566249	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGATCTGTGAAATTGC	NA	False	NA	NA	False	AATATA	-19	NA	55693867	55670701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_55671233_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_77611.nnic	chr2	-	1361	12	NNC	ENSG00000138035.15	novel	583	6	NA	NA	-4	8790	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	122.870421566249	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCACAAGGTTACTGCTAA	NA	False	NA	NA	False	AATAAA	-16	NA	55693867	55670891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_55671233_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_77615.nic	chr2	-	669	8	ISM	ENSG00000138035.15	ENST00000415374.5	3308	29	-44	45167	-4	-54	5prime_fragment	FALSE	canonical	3	346	junction_6	36.702888725771	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTCTAGTACTTTAAAT	NA	False	NA	NA	False	AAGAAA	-6	NA	55693867	55679735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_77617.known	chr2	-	2708	12	FSM	ENSG00000115380.20	ENST00000355426.8	2708	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_11	17.7563863496587	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	7	True	NA	-5	True	AATAAA	-25	NA	55923782	55865966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55922898_55922940_55923710
transcript_77618.known	chr2	-	3024	11	FSM	ENSG00000115380.20	ENST00000394555.6	3024	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	10.2610915598683	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	NA	False	NA	-5	True	AATAAA	-25	NA	55924139	55865966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_77632.nnic	chr2	+	918	3	NNC	ENSG00000271894.1	novel	2289	4	NA	NA	-29738	-204518	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	12	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGAGTTTCTGTT	NA	False	NA	5	True	AATAAA	-18	NA	56117891	56181653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_56118172_56147629_56147741_56181126
transcript_77633.nnic	chr2	+	698	3	NNC	ENSG00000271894.1	novel	2289	4	NA	NA	-28947	-204518	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGAGTTTCTGTT	NA	False	NA	5	True	AATAAA	-18	NA	56118682	56181653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_56118743_56147629_56147741_56181126
transcript_77637.known	chr2	+	1870	14	FSM	ENSG00000028116.18	ENST00000432057.2	1870	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	104.599716021201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGTAATTGGCTTT	43	False	NA	-76	True	NA	NA	NA	58046711	58159784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58046822_58048826_58048968_58058351_58058489_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_77642.nic	chr2	+	1939	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-23	0	combination_of_known_junctions	TRUE	canonical	3	40	junction_12	83.9839376020673	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	20	True	NA	11	True	AATAAA	-19	NA	58046688	58159871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154753_58154803_58159348
transcript_77643.nic	chr2	+	1934	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	83.9839376020673	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	20	True	NA	11	True	AATAAA	-19	NA	58046688	58159871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154758_58154803_58159348
transcript_77646.nic	chr2	+	1904	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	63.9797602544916	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	-41	True	NA	11	True	AATAAA	-19	NA	58046627	58159871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_77649.known	chr2	+	1773	13	FSM	ENSG00000028116.18	ENST00000340157.9	1773	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	33.7576123102463	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	-4	True	NA	11	True	AATAAA	-19	NA	58046805	58159871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_77650.nnic	chr2	+	1991	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	73.1761573191706	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	38	False	NA	11	True	AATAAA	-19	NA	58046847	58159871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_58047129_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_77685.known	chr2	+	338	1	FSM	ENSG00000273063.1	ENST00000608934.1	338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTAGCACTCTGTCTTC	NA	False	NA	5	True	AATAAA	-20	NA	58241348	58241686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58241300_58241700
transcript_77686.known	chr2	-	1698	14	FSM	ENSG00000115392.12	ENST00000402135.7	1698	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	157.516600045649	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-3	True	NA	-9	True	AATAAA	-14	NA	58241350	58159246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198578_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_77687.known	chr2	-	1576	13	FSM	ENSG00000115392.12	ENST00000403295.7	1576	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	204.459449932417	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	24	True	NA	-5	True	AATAAA	-18	NA	58241323	58159242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_77688.known	chr2	-	522	6	FSM	ENSG00000115392.12	ENST00000481670.2	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	293.757314802542	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTGGTGTGCATGGA	88	False	NA	-4	True	AATAAA	-16	NA	58241259	58213504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_58213707_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_77692.known	chr2	+	1182	7	FSM	ENSG00000233723.10	ENST00000422793.3	1187	7	0	5	0	0	multi-exon	FALSE	canonical	1	8	junction_1	15.0489940601431	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTTGGCATCTACTT	-4	True	NA	14	True	AATAAA	-17	NA	58428411	58931076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58428465_58461777_58461846_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
transcript_77695.known	chr2	+	1268	6	FSM	ENSG00000233723.10	ENST00000429664.6	1268	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	11.443775600736	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTATATGCCAAGTAAT	-4	True	NA	94	True	AATAAA	-19	NA	58428337	58931156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58428465_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
transcript_77700.nic	chr2	+	514	4	ISM	ENSG00000233723.10	ENST00000684946.1	1190	7	-7	80334	-7	-74954	5prime_fragment	FALSE	canonical	1	8	junction_1	20.0388511535855	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAAAAACTGAA	-17	True	NA	NA	False	NA	NA	NA	58428398	58850747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_58428465_58461777_58461846_58656649_58656712_58850429
transcript_77706.nnic	chr2	+	525	3	NNC	ENSG00000233723.10	novel	675	6	NA	NA	8853	-74954	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAACAAAAAAACTGAA	NA	False	NA	NA	False	NA	NA	NA	58529605	58850747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_58529751_58656649_58656712_58850429
transcript_77708.nnic	chr2	+	814	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_1	31.5	167	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	2678	False	NA	10	True	AATAAA	-14	NA	60417652	60424691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_60417982_60420067_60420153_60424291
transcript_77710.nnic	chr2	+	997	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	37	junction_1	26.5	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	2686	False	NA	10	True	AATAAA	-14	NA	60417660	60424691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_60417982_60419876_60420153_60424291
transcript_77713.nnic	chr2	+	801	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	43	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	2753	False	NA	10	True	AATAAA	-14	NA	60417727	60424691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_60417982_60420005_60420153_60424291
transcript_77717.nnic	chr2	+	697	2	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	114	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	2710	False	NA	10	True	AATAAA	-14	NA	60417684	60424691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_60417982_60424291
transcript_77720.known	chr2	-	1519	5	FSM	ENSG00000119866.22	ENST00000489516.7	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	192.213423048444	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGATTTGAATTTGTC	4525	False	NA	NA	False	AATATA	-18	NA	60550925	60451780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60550867
transcript_77721.nnic	chr2	-	1406	5	NNC	ENSG00000119866.22	novel	2494	5	NA	NA	590	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	204.335508416917	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCTTGTTCTT	2631	False	NA	-7	True	AATAAA	-14	NA	60552819	60452157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60552497
transcript_77723.known	chr2	-	2494	5	FSM	ENSG00000119866.22	ENST00000359629.10	2494	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	166.477475953956	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGTGAACTACCTTATA	7	True	NA	NA	False	AATAAA	-14	NA	60553634	60451166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60553215
transcript_77725.known	chr2	-	866	4	FSM	ENSG00000119866.22	ENST00000643222.1	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	11.7756811551038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATGAGTGATGCCCTG	5	True	NA	NA	False	NA	NA	NA	60550907	60452313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60452667_60462281_60462425_60545970_60546301_60550867
transcript_77728.known	chr2	-	6003	2	FSM	ENSG00000119866.22	ENST00000642180.1	6003	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGCATAAGTCTTTTG	9167	False	NA	NA	False	ATTAAA	-44	NA	60546283	60532859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60538550_60545970
transcript_77729.known	chr2	-	369	2	FSM	ENSG00000119866.22	ENST00000647469.1	369	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATTTTTCTTTTCTCTTT	9191	False	NA	3	True	TATAAA	-23	NA	60546259	60541840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60541921_60545970
transcript_7773.known	chr1	-	948	7	FSM	ENSG00000117543.22	ENST00000466807.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	101.994553231478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTCATAATTCCCAGG	12	True	NA	NA	False	NA	NA	NA	101025771	100990314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025639
transcript_77730.known	chr2	+	7348	22	FSM	ENSG00000115421.13	ENST00000238714.8	7348	22	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_1	14.0258911867577	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGATTGAGTGATGTT	13	True	NA	NA	False	AATAAA	-17	NA	60756267	60802086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_60756496_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
transcript_77739.known	chr2	+	11108	10	FSM	ENSG00000162924.15	ENST00000394479.4	11108	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	3.28107179116298	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTGAAATTTTGTTGCT	-16	True	NA	16	True	AATAAA	-19	NA	60881573	60931612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991_60901084_60916876_60917018_60918190_60918296_60918393_60918607_60920040_60920110_60920573_60920643_60921762
transcript_7774.known	chr1	+	1268	6	FSM	ENSG00000233184.8	ENST00000454721.7	1382	6	35	79	-2	-4	multi-exon	FALSE	canonical	1	1	junction_2	5.08330601085553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGCATGGCCGATGG	2	True	NA	-68	True	ATTAAA	-18	NA	101025884	101087189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101072659_101072831_101075394_101075717_101077362_101077509_101083460_101083575_101086851
transcript_77741.nic	chr2	+	715	4	ISM	ENSG00000162924.15	ENST00000295025.12	11255	11	-46	30572	-46	-45	5prime_fragment	FALSE	canonical	3	5	junction_2	1.69967317119759	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTATTATTACAAGAATA	380	False	NA	NA	False	AGTAAA	-3	NA	60881474	60901038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991
transcript_77743.known	chr2	-	1820	18	FSM	ENSG00000162927.14	ENST00000407787.5	1820	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	3.82307689629928	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTGTGTTAAAT	-6	True	NA	NA	False	NA	NA	NA	61017193	60942224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60942434_60945008_60945109_60948042_60948186_60952996_60953115_60953932_60953989_60954081_60954159_60955017_60955075_60960391_60960518_60961462_60961549_60962825_60962891_60965057_60965104_60965422_60965485_60967501_60967614_60971522_60971558_61006556_61006644_61008760_61009016_61011764_61011906_61017148
transcript_77749.known	chr2	+	1108	3	FSM	ENSG00000162928.9	ENST00000401576.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGTGACTATTGTCCTT	NA	False	NA	20	True	AATAAA	-30	NA	61017561	61019081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61017616_61017695_61017852_61018183
transcript_77753.known	chr2	-	571	3	FSM	ENSG00000162927.14	ENST00000421319.5	571	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGATTTCATTAAAAAG	4	True	NA	NA	False	TTTAAA	-42	NA	61017431	61008780	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61009016_61011764_61011906_61017236
transcript_77755.known	chr2	-	1227	3	FSM	ENSG00000162927.14	ENST00000398658.2	1227	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-6	True	NA	-8	True	AATAAA	-16	NA	61017193	61009847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61010889_61011764_61011906_61017148
transcript_77756.nnic	chr2	-	1456	3	NNC	ENSG00000162927.14	novel	1227	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.5	139	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	4	True	NA	-8	True	AATAAA	-16	NA	61017431	61009847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_61010889_61011764_61011906_61017157
transcript_77759.nnic	chr2	+	1571	2	NNC	ENSG00000162928.9	novel	1533	2	NA	NA	-6	3401	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTGTATCAACCTTC	-7	True	NA	45	True	AATAAA	-25	NA	61017713	61022482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_61017852_61021049
transcript_77760.known	chr2	+	4472	4	FSM	ENSG00000162928.9	ENST00000295030.6	4472	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	6.16441400296898	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTTTTAAGATAAATT	-1	True	NA	6	True	AATAAA	-17	NA	61017719	61051990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471
transcript_77761.known	chr2	+	1014	2	FSM	ENSG00000162928.9	ENST00000414712.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGTGACTATTGTCCT	9	True	NA	19	True	AATAAA	-29	NA	61017729	61019080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61017852_61018188
transcript_77762.known	chr2	+	1533	2	FSM	ENSG00000162928.9	ENST00000444100.2	1533	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTCTTCTTTATAGTGG	NA	False	NA	6	True	AATAAA	-16	NA	61017224	61019067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61017852_61018161
transcript_77763.known	chr2	+	4578	22	FSM	ENSG00000162929.14	ENST00000402291.6	4578	22	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_15	43.3727711693819	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGGAAAGTCTCTTT	-3	True	NA	8	True	AATAAA	-15	NA	61065870	61124280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61097699_61097853_61103852_61103999_61106562_61106663_61108316_61108350_61109196_61109297_61115978_61116071_61117356_61117386_61117466_61117541_61118027_61118117_61121184_61121277_61122125
transcript_77792.known	chr2	+	4472	21	FSM	ENSG00000162929.14	ENST00000453186.5	4472	21	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	43.0161306953566	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGTTTGGAAAGTCTC	6	True	NA	5	True	AATAAA	-12	NA	61065879	61124277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61097699_61097853_61103852_61103999_61106562_61106663_61108316_61108350_61109196_61109297_61115978_61116071_61117356_61117386_61117466_61117541_61118027_61118117_61121184_61121277_61122125
transcript_77799.nnic	chr2	+	1019	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	80.521348100985	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	NA	False	NA	17	True	AATAAA	-21	NA	61145069	61164828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_61145197_61159317_61159440_61162841_61162956_61163051_61163233_61164353
transcript_77802.nic	chr2	+	1044	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	78.9604331295111	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	NA	False	NA	17	True	AATAAA	-21	NA	61145073	61164828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051_61163233_61164353
transcript_77815.known	chr2	+	726	3	FSM	ENSG00000237651.8	ENST00000464909.2	726	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	95.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTGTTTGTACAAAT	-7	True	NA	-2	True	AATAAA	-2	NA	61145107	61164809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61145197_61163051_61163233_61164353
transcript_77816.known	chr2	-	595	3	FSM	ENSG00000212978.6	ENST00000422740.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	50	False	NA	NA	False	NA	NA	NA	61144891	61143567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61143946_61144168_61144267_61144772
transcript_77818.known	chr2	-	2532	2	FSM	ENSG00000212978.6	ENST00000420918.3	2532	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGGGTATACCAGTGGA	-9	True	NA	-24	True	AATAAA	-17	NA	61144950	61141591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61143946_61144772
transcript_77819.known	chr2	-	892	2	FSM	ENSG00000212978.6	ENST00000417691.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAAGCGGGTCCTA	-11	True	NA	NA	False	ATTAAA	-10	NA	61144952	61143554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61144267_61144772
transcript_77820.known	chr2	+	2640	11	FSM	ENSG00000162929.14	ENST00000482513.5	2640	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	52.457601927652	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTCAAATAAATAAAATAA	-3	True	NA	NA	False	NA	NA	NA	61065870	61089670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61066028_61068848_61068986_61069651_61069699_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357
transcript_77821.known	chr2	+	879	4	FSM	ENSG00000237651.8	ENST00000426997.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.6877523799553	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	NA	False	NA	-3	True	AATAAA	-1	NA	61145067	61164808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61145197_61162841_61162956_61163051_61163233_61164353
transcript_77822.known	chr2	-	11675	80	FSM	ENSG00000115464.15	ENST00000398571.7	11675	80	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_65	178.552399764396	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	-4	True	NA	-9	True	ATTAAA	-21	NA	61471087	61187462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61203139_61203264_61204255_61204381_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243_61280349_61281089_61281243_61283144_61283270_61283408_61283450_61284874_61284958_61288676_61288878_61293463_61293551_61294948_61295033_61295167_61295291_61296799_61296926_61300950_61301161_61301353_61301455_61311539_61311688_61311783_61311911_61314584_61314745_61314874_61314975_61317653_61317768_61319172_61319328_61325374_61325458_61331275_61331372_61333881_61333972_61339350_61339479_61339565_61339682_61343814_61344030_61347869_61348481_61348755_61348887_61349249_61349286_61350259_61350390_61350567_61350694_61370320_61370414_61370497_61370580_61378362_61378425_61380168_61380362_61383268_61383337_61394852_61395003_61395182_61395234_61405707_61406129_61420745_61420834_61470649
transcript_77824.known	chr2	-	2708	24	FSM	ENSG00000115464.15	ENST00000453734.1	2708	24	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_21	18.0140671769895	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCGTGCATTCGTTCTT	NA	False	NA	NA	False	AGTAAA	-14	NA	61280333	61226787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243
transcript_77832.known	chr2	+	2813	7	FSM	ENSG00000173209.23	ENST00000642732.1	2813	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	150.876329046894	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCAATCAATCAATCAG	191	False	NA	-49	True	AATGAA	-34	NA	61177701	61187499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61179172_61181319_61181406_61183546_61183663_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_77836.known	chr2	+	2437	7	FSM	ENSG00000173209.23	ENST00000357022.6	2437	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	136.103718620111	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	-31	True	NA	3	True	AATAAA	-20	NA	61177417	61187551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61178385_61178980_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_77840.known	chr2	+	6574	6	FSM	ENSG00000173209.23	ENST00000394457.7	6574	6	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	94.3385393145346	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAATCAGTGGTCTCAA	18	True	NA	28	True	AATAAA	-22	NA	61177528	61191203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_77845.known	chr2	+	1971	5	FSM	ENSG00000173209.23	ENST00000471542.5	1971	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	66.2589616580278	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	1157	False	NA	11	True	NA	NA	NA	61178667	61186912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61179172_61181319_61181406_61184711_61184801_61185501_61186498_61186616
transcript_77852.known	chr2	-	4500	26	FSM	ENSG00000082898.19	ENST00000677814.1	4500	26	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_25	345.041618359293	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	79	False	NA	-86	True	NA	NA	NA	61538531	61477688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561_61537669_61538491
transcript_77853.known	chr2	-	4105	25	FSM	ENSG00000082898.19	ENST00000404992.6	4105	25	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_24	350.119295145716	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTTTGTCTAGACTACA	1500	False	NA	NA	False	TTTAAA	-45	NA	61537110	61478337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61536709
transcript_77854.known	chr2	-	4452	25	FSM	ENSG00000082898.19	ENST00000677417.1	4452	25	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_24	351.564677153752	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	1493	False	NA	-86	True	NA	NA	NA	61537117	61477688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537018
transcript_77855.known	chr2	-	4988	25	FSM	ENSG00000082898.19	ENST00000401558.7	4988	25	0	0	0	0	multi-exon	FALSE	canonical	1	410	junction_18	245.697801622689	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCCTTGATTTACAAAC	-11	True	NA	71	True	AATGAA	-4	NA	61538356	61477848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_77856.known	chr2	-	4603	25	FSM	ENSG00000082898.19	ENST00000676553.1	4603	25	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_24	349.542667479793	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	NA	False	NA	-86	True	NA	NA	NA	61538741	61477688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61538491
transcript_77860.known	chr2	-	4437	24	FSM	ENSG00000082898.19	ENST00000678081.1	4437	24	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_8	352.621722806586	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	830	False	NA	-86	True	NA	NA	NA	61537780	61477688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_7787.known	chr1	+	1045	5	FSM	ENSG00000233184.8	ENST00000446527.6	1204	5	65	94	9	-22	multi-exon	FALSE	canonical	2	6	junction_2	3.53553390593274	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATTTTATAATGTATAAA	36	False	NA	-86	True	NA	NA	NA	101025918	101087171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101083460_101083575_101086851
transcript_77870.nic	chr2	-	1444	4	ISM	ENSG00000082898.19	ENST00000443240.5	565	7	-73	20606	42	3455	intron_retention	FALSE	canonical	3	1071	junction_3	44.1537717024894	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAGGAAAATAAAGAATTA	NA	False	NA	-2	True	GATAAA	-38	NA	61538699	61522611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_61522684_61526419_61526522_61533771_61533904_61537561
transcript_77871.known	chr2	-	720	3	FSM	ENSG00000082898.19	ENST00000481214.1	720	3	0	0	0	0	multi-exon	FALSE	canonical	3	1071	junction_2	29.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCACCTCTGACACCAA	916	False	NA	NA	False	AATATA	-8	NA	61537694	61526066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61526522_61533771_61533904_61537561
transcript_77873.known	chr2	-	3479	26	FSM	ENSG00000082898.19	ENST00000406957.5	3479	26	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_25	342.244857375535	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTATGTGTTTTTTTGTA	-15	True	NA	-63	True	ATTAAA	-21	NA	61538248	61478699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561_61537588_61538137
transcript_77874.known	chr2	-	3777	7	FSM	ENSG00000170264.13	ENST00000404929.6	3777	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.6612896230823	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTTTTATATACTTAC	-19	True	NA	1	True	AATAAA	-25	NA	61854060	61824847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61838537_61838706_61839420_61840582_61842121_61842361_61853858
transcript_77877.known	chr2	-	3684	6	FSM	ENSG00000170264.13	ENST00000405894.3	3684	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	11.534296684237	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAATATGGTTTTTAT	354	False	NA	-7	True	AATAAA	-17	NA	61854143	61824855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840582_61842121_61842361_61853858
transcript_77888.known	chr2	-	1897	5	FSM	ENSG00000170264.13	ENST00000307507.3	1897	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.9895810717903	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAATTAAAAAAGAGG	-23	True	NA	NA	False	AAGAAA	-4	NA	61854064	61836056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61836110_61839420_61840582_61842121_61842361_61846758_61846997_61853858
transcript_77892.nic	chr2	-	768	3	ISM	ENSG00000170264.13	ENST00000456262.5	3579	6	-16	15393	-16	-4190	5prime_fragment	FALSE	canonical	1	1	junction_1	31.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGTCCATGAAATCTAAA	389	False	NA	17	True	AAAAAG	-1	NA	61854108	61840246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_61840526_61842121_61842361_61853858
transcript_77896.known	chr2	-	699	2	FSM	ENSG00000170264.13	ENST00000496369.1	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGCTAATTGAATCAG	NA	False	NA	NA	False	ATTAAA	-11	NA	61839524	61835514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61836110_61839420
transcript_779.known	chr1	-	1072	3	FSM	ENSG00000175756.14	ENST00000338370.7	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	3505	junction_2	92	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGTCTGGAGCTCCA	29	True	NA	-23	True	AATAAA	-22	NA	1375157	1373729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1373903_1373999_1374446_1374704
transcript_77903.known	chr2	-	388	2	FSM	ENSG00000115484.15	ENST00000461370.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACGAATTGGGTGAAC	169	False	NA	-15	True	AATAAA	-19	NA	61888458	61887947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61888258_61888380
transcript_77904.known	chr2	-	2376	14	FSM	ENSG00000115484.15	ENST00000394440.8	2376	14	0	0	0	0	multi-exon	FALSE	canonical	3	2445	junction_12	262.683241199549	3091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTCCAGTGATTTT	-29	True	NA	-1	True	NA	NA	NA	61888656	61868084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
transcript_77907.known	chr2	+	629	3	FSM	ENSG00000173163.11	ENST00000472729.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTCTACTTGCTCA	297	False	NA	19	True	ATTAAA	-16	NA	61888723	62136058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61888843_62000700_62000983_62135830
transcript_77911.known	chr2	+	604	2	FSM	ENSG00000173163.11	ENST00000471704.1	604	2	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTAGAATCCTTTTTCAG	-6	True	NA	NA	False	NA	NA	NA	61905646	62001092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61905859_62000700
transcript_77919.known	chr2	-	1654	4	FSM	ENSG00000186889.10	ENST00000335390.6	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.74165738677394	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTGTCTTGTGCAAT	-12	True	NA	NA	False	AATAAA	-31	NA	62506195	62500217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_62501488_62502436_62502551_62502690_62502795_62506029
transcript_7792.known	chr1	+	587	4	FSM	ENSG00000233184.8	ENST00000656224.2	882	4	182	113	88	31	multi-exon	FALSE	canonical	2	5	junction_1	4.02768199119819	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAGGGAATTAAATCA	156	False	NA	NA	False	NA	NA	NA	101026038	101087155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101077362_101077509_101083460_101083575_101086851
transcript_77927.known	chr2	+	588	2	FSM	ENSG00000115504.15	ENST00000471179.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTCCAAATAATATACA	28	False	NA	NA	False	NA	NA	NA	63044838	63045655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63045181_63045409
transcript_77929.known	chr2	+	1311	9	FSM	ENSG00000115504.15	ENST00000405482.5	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	20.2592571433407	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGTGGATATGAGCAAG	-44	True	NA	NA	False	CATAAA	-39	NA	62705651	62864904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_62705737_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730
transcript_77930.known	chr2	+	1374	5	FSM	ENSG00000115504.15	ENST00000472809.5	1374	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	22.561028345357	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAGAAAAAGAGAGA	16	True	NA	13	True	AAGAAA	-23	NA	62705711	62772134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_62705737_62706896_62707296_62747394_62747453_62764265_62764362_62771338
transcript_77931.nnic	chr2	-	1688	4	NNC	ENSG00000231609.7	novel	2069	4	NA	NA	58	-519	intron_retention	FALSE	canonical	0	0	junction_2	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTCGATCGCATCACAGC	2023	False	NA	-12	True	AATAAA	-25	NA	63048582	63044440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_63045444_63046036_63046142_63046481_63046648_63048168
transcript_77933.known	chr2	-	540	4	FSM	ENSG00000231609.7	ENST00000413549.1	540	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATGGGGAGCACCAGGC	2084	False	NA	NA	False	NA	NA	NA	63048521	63045310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_63045444_63046036_63046142_63046481_63046651_63048388
transcript_77935.nic	chr2	+	836	3	ISM	ENSG00000115507.10	ENST00000405984.8	1694	5	-33	3037	-32	0	5prime_fragment	FALSE	canonical	3	37	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGCACCCATTTTTG	0	True	NA	NA	False	ATTAAA	-16	NA	63050797	63053546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_63050898_63051248_63051318_63052879
transcript_77937.known	chr2	-	4894	18	FSM	ENSG00000143951.16	ENST00000272321.12	4894	18	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	14.9864991145145	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAAAGTTTTTGCTTC	0	True	NA	-43	True	AATAAA	-19	NA	63588477	63119558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_63122057_63152913_63152946_63153494_63153575_63174669_63174833_63259306_63259410_63313247_63313312_63378385_63378510_63381905_63382095_63404047_63404658_63433744_63433937_63437420_63437555_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_77947.nnic	chr2	-	1156	8	NNC	ENSG00000143951.16	novel	847	8	NA	NA	28	-1010	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	37.211475078946	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTCTGAGTTATCC	8759	False	NA	0	True	ATTAAA	-19	NA	63588771	63438466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_63438624_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_77957.nnic	chr2	-	1959	3	NIC	ENSG00000143951.16	novel	754	2	NA	NA	66	720	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	1	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTATTGGCTTTTTCT	0	True	NA	-7	True	NA	NA	NA	63588733	63563454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_63564625_63571374_63571627_63588196
transcript_77959.nnic	chr2	+	1072	2	Antisense	novelGene_ENSG00000143951.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGGGTCCGCGCTGCC	NA	False	NA	18	True	AATAAA	-16	NA	63322308	63328366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_63322827_63327812
transcript_77961.known	chr2	-	754	2	FSM	ENSG00000143951.16	ENST00000484073.1	754	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCCACCTAAGTGAC	8	True	NA	NA	False	AATGAA	-43	NA	63588500	63564174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_63564625_63588196
transcript_77967.known	chr2	+	1443	9	FSM	ENSG00000014641.21	ENST00000432309.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	1945.65974912753	2493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAGACTCTGTT	6	True	NA	13	True	AATAAA	-15	NA	63589150	63607194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63589385_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_77973.known	chr2	+	808	6	FSM	ENSG00000014641.21	ENST00000409476.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	2252.7072956778	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	1	True	NA	-90	True	NA	NA	NA	63588972	63607091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63589047_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_77974.known	chr2	+	700	5	FSM	ENSG00000014641.21	ENST00000409908.5	700	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2571.1268322469	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	-14	True	NA	-90	True	NA	NA	NA	63588957	63607091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63589047_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_77979.known	chr2	+	634	2	FSM	ENSG00000014641.21	ENST00000462944.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTTTGTGTTATAGA	13	True	NA	NA	False	AATAAA	-29	NA	63588984	63590974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63589047_63590402
transcript_77981.known	chr2	+	406	1	FSM	ENSG00000234488.1	ENST00000411843.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	318	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGATGCTTTGTTTTGGT	35	False	NA	NA	False	NA	NA	NA	63684304	63684710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63684300_63684700
transcript_7799.known	chr1	+	3944	3	FSM	ENSG00000233184.8	ENST00000659528.2	3983	3	39	0	4	0	multi-exon	FALSE	canonical	2	5	junction_1	4.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTCTTTCAATGTT	11	True	NA	NA	False	GATAAA	-38	NA	101025893	101090513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101083460_101083575_101086851
transcript_77990.known	chr2	+	2057	11	FSM	ENSG00000169764.16	ENST00000467648.6	2057	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1806.44199740816	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGTTTAATCTTAAAA	6	True	NA	-80	True	NA	NA	NA	63840968	63891451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63841233_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_780.known	chr1	-	875	4	FSM	ENSG00000175756.14	ENST00000378853.3	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_3	1426.0927973546	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTCCTGCGGGTCTGG	13	True	NA	-30	True	AATAAA	-15	NA	1375173	1373736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1374996
transcript_78006.known	chr2	+	588	4	FSM	ENSG00000169764.16	ENST00000484142.2	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1658.56289868334	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATAGATTTTTGCAAG	-9	True	NA	NA	False	AAAAAG	-23	NA	63840953	63857863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63841233_63842058_63842205_63856305_63856434_63857828
transcript_78007.known	chr2	+	2105	10	FSM	ENSG00000169764.16	ENST00000394417.7	2105	10	0	0	0	0	multi-exon	FALSE	canonical	3	1474	junction_1	1083.09311296768	6042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	6	True	NA	29	True	AATAAA	-13	NA	63840968	63891560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_78008.known	chr2	+	2150	10	FSM	ENSG00000169764.16	ENST00000337130.10	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	2782	junction_1	729.256766920106	15952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	2	True	NA	29	True	AATAAA	-13	NA	63841895	63891560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_78009.known	chr2	+	784	5	FSM	ENSG00000169764.16	ENST00000488245.6	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	1855.38060448524	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGTAACATTTAGCCT	8	True	NA	NA	False	NA	NA	NA	63841901	63882649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63842205_63842538_63842600_63856305_63856434_63857828_63857937_63882465
transcript_78010.known	chr2	+	4397	7	FSM	ENSG00000169764.16	ENST00000475550.5	4397	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	1783.45523726651	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTACACTGGTACTTT	676	False	NA	31	True	AATAAA	-15	NA	63841850	63891562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63842205_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63890186_63891119
transcript_78011.known	chr2	+	1955	10	FSM	ENSG00000169764.16	ENST00000445915.6	1955	10	0	0	0	0	multi-exon	FALSE	canonical	2	187	junction_1	1460.79552992433	2646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTACACTGGTACTT	146	False	NA	30	True	AATAAA	-14	NA	63842324	63891561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63842438_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_78012.known	chr2	+	560	5	FSM	ENSG00000169764.16	ENST00000475462.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1775.58249245142	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAAATCTACACTTTCA	-3	True	NA	NA	False	NA	NA	NA	63842437	63884063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63842472_63856305_63856434_63857828_63857937_63882465_63882652_63883959
transcript_78013.known	chr2	+	753	6	FSM	ENSG00000169764.16	ENST00000491621.5	753	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	1677.82354256936	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTACGCCAGTTTCT	5	True	NA	NA	False	AATACA	-27	NA	63846073	63885684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63846175_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588
transcript_78014.known	chr2	+	1015	5	FSM	ENSG00000169764.16	ENST00000487469.5	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	1990.0593584112	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGAAATCATTGTGAAT	-9	True	NA	NA	False	NA	NA	NA	63841007	63886512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63841233_63882465_63882652_63883959_63884094_63885588_63885887_63886340
transcript_78019.known	chr2	+	1555	4	FSM	ENSG00000225889.10	ENST00000451350.3	1582	4	27	0	1	0	multi-exon	FALSE	canonical	3	20	junction_2	3.68178700572909	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-7	True	NA	19	True	ATTAAA	-21	NA	64228416	64252859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419
transcript_78022.known	chr2	+	1477	4	FSM	ENSG00000225889.10	ENST00000675635.2	1506	4	2	27	1	0	multi-exon	FALSE	canonical	0	0	junction_1	8.64098759787715	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAAAGCTTTATTGCTC	2	True	NA	-8	True	NA	NA	NA	64228425	64252832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64228630_64229496_64229641_64251118_64251835_64252419
transcript_78025.nnic	chr2	+	1215	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2457	3895	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_3	44.8998886412873	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTTGGCTGAATTGA	NA	False	NA	14	True	AATAAA	-25	NA	64252691	64261505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64260866
transcript_78027.nnic	chr2	+	897	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2457	5802	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	52.5378170675393	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTGTGAGCTGTAATA	NA	False	NA	4	True	ATTAAA	-21	NA	64252691	64263412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64263091
transcript_78029.nnic	chr2	+	1284	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2457	6189	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	52.5378170675393	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATCTCCTGGGTTGTG	NA	False	NA	8	True	ACTAAA	-24	NA	64252691	64263799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64263091
transcript_78032.nnic	chr2	+	1219	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2510	3895	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	35.7055862420559	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTTGGCTGAATTGA	NA	False	NA	14	True	AATAAA	-25	NA	64252744	64261505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254922_64255082_64260227_64260350_64260866
transcript_78039.nnic	chr2	-	1384	3	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTAATAACAAAGGCTAA	-6	True	NA	-31	True	NA	NA	NA	64255406	64209329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_64210167_64231352_64231409_64254915
transcript_78043.nnic	chr2	+	1007	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2457	-1	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_2	57.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAAGCCTGTTTGGTGG	NA	False	NA	9	True	ATTAAA	-14	NA	64252691	64257603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64257050
transcript_78044.nnic	chr2	+	878	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2457	0	at_least_one_novel_splicesite	FALSE	canonical	3	141	junction_2	7	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	ATTAAA	-21	NA	64252691	64257610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64257186
transcript_78047.nnic	chr2	+	882	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2510	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	50.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	ATTAAA	-21	NA	64252744	64257610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254922_64255082_64257186
transcript_7805.known	chr1	+	619	2	FSM	ENSG00000233184.8	ENST00000654574.2	634	2	11	4	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAACTGTTTTTCTT	-26	True	NA	8	True	AATAAA	-20	NA	101025856	101087265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101086851
transcript_78051.nnic	chr2	+	708	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2544	5802	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	10	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTCTGTGAGCTGTAATA	NA	False	NA	4	True	ATTAAA	-21	NA	64252778	64263412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64260227_64260350_64263091
transcript_78055.nnic	chr2	+	1560	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2558	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	56.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-1	True	NA	16	True	ATTAAA	-21	NA	64252792	64257610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254196_64255082_64257186
transcript_78058.nnic	chr2	+	732	2	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2501	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	ATTAAA	-21	NA	64252735	64257610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64257186
transcript_78059.nnic	chr2	-	1424	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCATGTGTGTTTGTTTG	7772	False	NA	2	True	NA	NA	NA	64255469	64209296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_64210167_64254915
transcript_7806.known	chr1	+	1224	1	FSM	ENSG00000233184.8	ENST00000656671.1	1224	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTTTAAAAGATCTTAAA	24	True	NA	NA	False	AATAGA	-31	NA	101025906	101027130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101025900_101027100
transcript_78061.nnic	chr2	-	1016	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	7772	False	NA	NA	False	AAAAAG	-36	NA	64255469	64209704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_64210167_64254915
transcript_78063.nnic	chr2	-	937	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAGAAAAAGAA	7772	False	NA	NA	False	AAAAAG	-45	NA	64255469	64209783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_64210167_64254915
transcript_78068.known	chr2	-	3716	7	FSM	ENSG00000197329.12	ENST00000358912.5	3716	7	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_6	42.0849009609015	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTTTTCTAAGTTA	-1	True	NA	NA	False	AATAAA	-25	NA	64144420	64092651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
transcript_7807.known	chr1	-	524	4	FSM	ENSG00000117543.22	ENST00000476507.1	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	24.0878023535196	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATACATTTAATTGT	489	False	NA	NA	False	AATAAA	-22	NA	101025753	101013648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_101013819_101021640_101021766_101025308_101025467_101025682
transcript_78072.known	chr2	-	549	1	FSM	ENSG00000236148.5	ENST00000479658.1	549	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTGCTATTCTGGAA	NA	False	NA	NA	False	ATTAAA	-22	NA	64347741	64347192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64347200_64347700
transcript_78073.known	chr2	-	2507	2	FSM	ENSG00000223935.3	ENST00000669208.1	2507	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	905	False	NA	NA	False	NA	NA	NA	64453967	64446319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64448552_64453692
transcript_78075.known	chr2	+	3856	5	FSM	ENSG00000119862.13	ENST00000238875.10	3856	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	12.747548783982	592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTCCAGTTTATAACAT	-2	True	NA	17	True	AATAAA	-17	NA	64454161	64461381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456287_64456466_64458284
transcript_78077.known	chr2	+	4113	10	FSM	ENSG00000119844.16	ENST00000238855.11	4113	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	40.5319566042998	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAATTTAGCCTGGTG	-14	True	NA	NA	False	AATAAA	-8	NA	64524304	64592997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64581189_64581274_64585421_64585546_64591887
transcript_7808.known	chr1	+	1087	5	FSM	ENSG00000233184.8	ENST00000656060.1	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.67340285895511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAACTGTTTTTCTT	-26	True	NA	8	True	AATAAA	-20	NA	101025856	101087265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101025948_101075394_101075717_101077362_101077509_101083460_101083575_101086851
transcript_78081.known	chr2	+	4040	9	FSM	ENSG00000119844.16	ENST00000238856.8	4040	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	10.4992559260169	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTGGTGTCTTTGTA	-14	True	NA	NA	False	AATAAA	-16	NA	64524304	64593005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591884
transcript_7809.known	chr1	+	1971	3	FSM	ENSG00000170989.10	ENST00000561748.2	1971	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAGAAATCATAATAAACT	5	True	NA	NA	False	AGTAAA	-10	NA	101236898	101243713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101237100_101241688_101241773_101242027
transcript_78091.nic	chr2	+	2553	2	ISM	ENSG00000119844.16	ENST00000498706.5	4674	9	-194	38419	28	-38181	5prime_fragment	FALSE	canonical	3	92	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCACACTTATTACCT	14	True	NA	NA	False	TATAAA	-27	NA	64524332	64553715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_64524613_64551442
transcript_78092.known	chr2	-	5549	2	FSM	ENSG00000179833.4	ENST00000313349.3	5549	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCATGCTTGCAGTTT	-6	True	NA	-7	True	AATAAA	-15	NA	64653913	64631620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64636876_64653619
transcript_78093.known	chr2	-	318	1	FSM	ENSG00000179833.4	ENST00000608423.1	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGTCTATTATTTCC	1	True	NA	NA	False	ATTAAA	-36	NA	64750895	64750577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64750600_64750900
transcript_78094.known	chr2	+	627	2	FSM	ENSG00000226756.1	ENST00000439964.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTCTGGAAGTACTGTG	NA	False	NA	NA	False	AATAAA	-19	NA	64644611	64646698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64644965_64646424
transcript_7810.known	chr1	+	2778	2	FSM	ENSG00000170989.10	ENST00000305352.7	2778	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGTGAAGAGCATTC	0	True	NA	7	True	AATAAA	-17	NA	101237018	101241518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101237100_101238821
transcript_78103.nnic	chr2	-	1059	3	FSM	ENSG00000237638.3	ENST00000685506.1	663	3	-21	-375	10	339	multi-exon	FALSE	canonical	3	16	junction_2	0.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAAGGTGGGGGGGG	NA	False	NA	NA	False	AAAAAG	-6	NA	65056216	65047514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65048213_65051278_65051338_65055914
transcript_78104.nnic	chr2	-	1096	3	NNC	ENSG00000237638.3	novel	671	2	NA	NA	0	334	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAAAGGTGGG	NA	False	NA	NA	False	AAAAAG	-1	NA	65056226	65047519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_65048213_65055529_65055621_65055914
transcript_78105.nnic	chr2	-	682	3	FSM	ENSG00000237638.3	ENST00000685506.1	663	3	-21	2	10	-2	multi-exon	FALSE	canonical	3	16	junction_2	0.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	NA	False	NA	-2	True	GATAAA	-17	NA	65056216	65047891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65048213_65051278_65051338_65055914
transcript_78106.nnic	chr2	-	724	3	NNC	ENSG00000237638.3	novel	671	2	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	1.5	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	NA	False	NA	-2	True	GATAAA	-17	NA	65056226	65047891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_65048213_65055529_65055621_65055914
transcript_78107.known	chr2	-	608	2	FSM	ENSG00000237638.3	ENST00000666526.2	671	2	63	0	5	0	multi-exon	FALSE	canonical	3	30	junction_1	0	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTCACTAGGTAAAGG	19	True	NA	36	True	AATAGA	-3	NA	65056163	65047853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65048213_65055914
transcript_7811.known	chr1	-	2189	6	FSM	ENSG00000118733.17	ENST00000338858.9	2189	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.72046505340853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACACCTGACATAGAGT	12	True	NA	NA	False	TATAAA	-18	NA	101846973	101803485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_101804916_101806075_101806183_101825025_101825246_101830671_101830828_101836878_101837026_101846844
transcript_78112.known	chr2	+	5803	7	FSM	ENSG00000011523.14	ENST00000377990.7	5803	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	28.0381684296405	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTTGGCTTGTGTTT	-11	True	NA	7	True	AATAAA	-16	NA	65056415	65087004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281_65074405_65077867_65077965_65082535_65082710_65083638
transcript_7812.known	chr1	-	3165	6	FSM	ENSG00000118733.17	ENST00000370103.9	3165	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.72046505340853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGATTTCTTTTTTTGCC	2	True	NA	NA	False	ATTAAA	-31	NA	101996926	101802559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_101804916_101806075_101806183_101825025_101825246_101830671_101830828_101836878_101837026_101996747
transcript_78136.known	chr2	-	2448	6	FSM	ENSG00000138069.18	ENST00000409784.8	2448	6	0	0	0	0	multi-exon	FALSE	canonical	3	1288	junction_4	75.7083879104555	4711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGGCGTGCTTGGTGGA	6	True	NA	NA	False	AATAAA	-20	NA	65130106	65086853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65097970_65098067_65104733_65104807_65129892
transcript_78137.known	chr2	-	2254	4	FSM	ENSG00000138069.18	ENST00000409892.5	2254	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	617.017737904583	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATAGGCGTGCTTGGTGG	7	True	NA	NA	False	AATAAA	-19	NA	65130105	65086854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65088691_65088938_65089071_65104733_65104807_65129892
transcript_78138.known	chr2	-	1333	5	FSM	ENSG00000138069.18	ENST00000409751.1	1333	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_3	592.711776498493	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	8	True	NA	-12	True	AATAAA	-29	NA	65130104	65087870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65104733_65104807_65129892
transcript_78139.known	chr2	-	1198	4	FSM	ENSG00000138069.18	ENST00000398529.7	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	606.007150672883	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	11	True	NA	-12	True	AATAAA	-29	NA	65130101	65087870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65088691_65097970_65098067_65104733_65104807_65129892
transcript_78140.known	chr2	+	2685	10	FSM	ENSG00000138071.15	ENST00000377982.8	2685	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	444.237535170455	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTAATTACAAAATACAAG	12	True	NA	NA	False	AATAAA	-15	NA	65227836	65270146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_65227958_65239851_65239963_65242048_65242064_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_78141.known	chr2	+	3783	9	FSM	ENSG00000138071.15	ENST00000260641.10	3783	9	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_6	64.4534715899772	5231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTTGTCATTTCTT	6	True	NA	21	True	AATAAA	-22	NA	65227830	65271253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_65227958_65239851_65239963_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_78148.known	chr2	-	4519	6	FSM	ENSG00000198369.10	ENST00000356388.9	4519	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	9.1214034007931	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGGCTTTGGGGTATTT	-1	True	NA	-2	True	TATAAA	-15	NA	65432599	65310850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65314170_65316733_65316884_65331986_65332052_65334604_65334774_65344718_65344897_65431961
transcript_78153.nnic	chr2	+	640	4	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-64361	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTATATTTTGGAGTGT	-5	True	NA	4	True	AATAAA	-18	NA	65558910	65628431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_65559085_65562377_65562449_65609776_65609903_65628162
transcript_78154.nnic	chr2	+	514	3	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-64361	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTATATTTTGGAGTGT	-5	True	NA	4	True	AATAAA	-18	NA	65558910	65628431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_65559085_65562377_65562449_65628162
transcript_78155.nnic	chr2	+	566	3	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-64358	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTATATTTTGGAGTGT	-2	True	NA	4	True	AATAAA	-18	NA	65558913	65628431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_65559085_65609776_65609903_65628162
transcript_78156.nnic	chr2	+	525	3	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-56411	7	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	2.5	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTATATTTTGGAGTGT	7945	False	NA	4	True	AATAAA	-18	NA	65566860	65628431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_65566991_65609776_65609903_65628162
transcript_78157.nnic	chr2	+	558	3	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-56411	14	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGAGTGTTTTGTTA	7945	False	NA	11	True	AATAAA	-25	NA	65566860	65628438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_65566991_65609776_65609929_65628162
transcript_7816.nnic	chr1	-	905	2	NNC	ENSG00000118733.17	novel	2189	6	NA	NA	-105	-19974	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCTTTTTTGGATGT	-3	True	NA	NA	False	AATAAA	-27	NA	101847078	101845063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_101845735_101846844
transcript_78167.nnic	chr2	-	1960	8	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	63060	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	7.32621794569033	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAAATGCTGAAATA	NA	False	NA	-39	True	TTTAAA	-2	NA	67334920	67175187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325084_67325233_67333984
transcript_78168.nnic	chr2	-	1917	8	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	63060	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	6.86606562325595	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAAATGCTGAAATA	NA	False	NA	-39	True	TTTAAA	-2	NA	67334920	67175187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325127_67325233_67333984
transcript_7817.nnic	chr1	-	378	2	NNC	ENSG00000118733.17	novel	2189	6	NA	NA	-105	-20501	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATATTATCTAATATTTA	-3	True	NA	NA	False	AATAAA	-18	NA	101847078	101845590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_101845735_101846844
transcript_78170.nnic	chr2	-	1651	8	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	63060	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	7.32621794569033	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATTTGAAATGATTTGA	NA	False	NA	-15	True	AATAAA	-16	NA	67334920	67175496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325084_67325233_67333984
transcript_78175.known	chr2	-	571	5	FSM	ENSG00000236780.7	ENST00000414404.1	571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.6770782520313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACATTGTAATAATTGA	94	False	NA	59	True	TTTAAA	-25	NA	67215277	67175422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67215227
transcript_7818.known	chr1	-	7311	67	FSM	ENSG00000060718.22	ENST00000370096.9	7311	67	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_51	18.6993515500677	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTGGTCATTTTCTT	5	True	NA	-5	True	AATAAA	-20	NA	103108522	102876472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_102878166_102879682_102879917_102881696_102881766_102883198_102883312_102886806_102887057_102888576_102888631_102888722_102888759_102888865_102888920_102889454_102889563_102890450_102890505_102898124_102898179_102898665_102898774_102898940_102898995_102912158_102912213_102913636_102913691_102914351_102914406_102914703_102914812_102915630_102915685_102920310_102920365_102921517_102921572_102923335_102923390_102934448_102934557_102935059_102935114_102939034_102939089_102940326_102940435_102946848_102946957_102961865_102961920_102962175_102962266_102962652_102962761_102965486_102965541_102970218_102970273_102974829_102974884_102978707_102978753_102978859_102978914_102979059_102979105_102979381_102979436_102984137_102984192_102987632_102987741_102989517_102989572_102995863_102995909_102995988_102996043_102997079_102997125_102998309_102998364_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
transcript_78184.known	chr2	+	4948	6	FSM	ENSG00000143971.9	ENST00000272342.6	4948	6	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	23.5202040807473	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	10	True	NA	-21	True	NA	NA	NA	67397332	67412089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67403224_67405336_67409910
transcript_78188.known	chr2	+	2946	6	FSM	ENSG00000143971.9	ENST00000644028.1	2946	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	64.4192517808147	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	1	True	NA	-21	True	NA	NA	NA	67397323	67412089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67405235_67405336_67409910
transcript_78195.known	chr2	+	3110	5	FSM	ENSG00000143971.9	ENST00000645739.1	3110	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	80.5807048864677	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	-1	True	NA	-21	True	NA	NA	NA	67397321	67412089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_67397672_67399168_67399298_67402861_67402975_67404996_67405336_67409910
transcript_78197.known	chr2	-	772	6	FSM	ENSG00000197223.12	ENST00000409302.1	772	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	204.541829462827	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAATTTACCATCTCT	-15	True	NA	NA	False	NA	NA	NA	68063009	68042676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047316_68053060_68053138_68062957
transcript_78204.nic	chr2	-	1528	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	-50	1113	-28	842	multi-exon	FALSE	canonical	3	113	junction_7	11.0176111340908	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTTGGACTTGAAAC	NA	False	NA	NA	False	NA	NA	NA	68157577	68130917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_78206.known	chr2	-	2306	15	FSM	ENSG00000273398.6	ENST00000406334.3	2306	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	56.8343457527476	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGACTTTGGACTTGA	NA	False	NA	NA	False	AATAAA	-7	NA	68261230	68131237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260_68157695_68157795_68158123_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252987_68253138_68261188
transcript_78211.known	chr2	-	2591	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_7	11.0176111340908	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTATAAATGCTTA	-11	True	NA	50	True	AATAAA	-19	NA	68157527	68129804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_78215.nic	chr2	-	1386	8	ISM	ENSG00000243667.7	ENST00000492039.6	1280	10	1	7979	1	845	5prime_fragment	FALSE	canonical	2	4	junction_7	46.0323754746237	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGGACTTGAAACCTT	-29	True	NA	NA	False	NA	NA	NA	68157545	68130914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157373
transcript_78218.known	chr2	-	1517	7	FSM	ENSG00000243667.7	ENST00000409164.1	1517	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	9.71968220788222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAGTTAATGGTATTTC	34	True	NA	NA	False	ATTAAA	-14	NA	68157482	68134089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_78220.known	chr2	+	2242	7	FSM	ENSG00000115946.8	ENST00000263657.7	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_6	54.8859929510456	856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGCATCTCTAAAACC	-19	True	NA	13	True	ATTAAA	-18	NA	68157887	68176238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_68158142_68158379_68158530_68161682_68161767_68162264_68162326_68162545_68162664_68173346_68173418_68174734
transcript_78233.known	chr2	+	979	1	FSM	ENSG00000273064.1	ENST00000608069.1	979	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGGTTCCTGTCTCTC	1268	False	NA	NA	False	AATAAA	-23	NA	68252869	68253848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_68252900_68253800
transcript_78234.known	chr2	-	3024	6	FSM	ENSG00000221823.11	ENST00000234310.8	3024	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	7.1442284397967	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATGTATTCAGTGGTC	-15	True	NA	-11	True	AATAAA	-15	NA	68252532	68178856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68181011_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252124
transcript_78235.known	chr2	-	1493	4	FSM	ENSG00000119865.9	ENST00000481714.1	1493	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.9888847706114	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATATGGACCTGTAATCA	NA	False	NA	-57	True	NA	NA	NA	68320051	68293065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68294027_68317156_68317308_68319221_68319323_68319771
transcript_78236.known	chr2	-	644	3	FSM	ENSG00000119865.9	ENST00000409559.7	644	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGGTTTACTCACTGT	48	True	NA	NA	False	ATTAAA	-16	NA	68319400	68284170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68284485_68317156_68317308_68319221
transcript_78238.known	chr2	-	1896	3	FSM	ENSG00000119865.9	ENST00000263655.4	1896	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGACTTGCATTCTTA	17	True	NA	-1	True	AATAAA	-15	NA	68319949	68293009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68294027_68317156_68317308_68319221
transcript_78239.known	chr2	-	5699	4	FSM	ENSG00000204923.4	ENST00000377957.4	5699	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3.29983164553722	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTATTATTTTGAATTA	-9	True	NA	-15	True	AATAAA	-17	NA	68467294	68459421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68464371_68464839_68465179_68466143_68466471_68467210
transcript_78246.nic	chr2	-	479	2	ISM	ENSG00000204923.4	ENST00000377957.4	5699	4	-163	6817	-163	-6817	5prime_fragment	FALSE	canonical	3	8	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGCTGTCTTTATATAC	-3	True	NA	NA	False	AATAAA	-16	NA	68467457	68466238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_68466471_68467210
transcript_78247.known	chr2	+	3823	10	FSM	ENSG00000169621.10	ENST00000303795.9	3823	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.71722460186015	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGTGTAATGAAAATGA	10	True	NA	NA	False	AATAAA	-17	NA	68467584	68580162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_68467828_68490189_68490262_68502730_68502904_68513079_68513228_68513547_68513681_68526060_68526243_68537871_68538228_68545186_68545313_68567340_68567388_68577819
transcript_78249.nnic	chr2	+	1230	2	NNC	ENSG00000163219.12	novel	1227	8	NA	NA	-5	-81299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTAGTTAAATTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	68679595	68693839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_68679730_68692743
transcript_78258.known	chr2	+	1126	13	FSM	ENSG00000169604.21	ENST00000482235.2	1126	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	31.4124665627447	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATGATTTGTGCT	77	False	NA	NA	False	TATAAA	-17	NA	69013499	69135169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69134994
transcript_7826.nic	chr1	-	724	3	ISM	ENSG00000060718.22	ENST00000427239.5	1709	15	-397	70346	-53	-47918	5prime_fragment	FALSE	canonical	3	50	junction_1	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTCAGTCTTTCCTTTT	28	False	NA	NA	False	AGTAAA	-11	NA	103108575	103078818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_103078872_103082804_103082973_103108072
transcript_78260.known	chr2	+	2221	13	FSM	ENSG00000169604.21	ENST00000409829.7	2221	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_12	22.4739046204457	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGGTTGATACTTAGGC	18	False	NA	8	True	AATAAA	-12	NA	69013305	69146401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69145325
transcript_78262.known	chr2	+	1449	10	FSM	ENSG00000169604.21	ENST00000463335.2	1449	10	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_7	4.99876527964533	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGATTCTGCAGCTTT	0	True	NA	18	True	AATAAA	-27	NA	69013356	69103444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841
transcript_78265.known	chr2	-	8632	19	FSM	ENSG00000198380.13	ENST00000361060.5	8632	19	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_4	58.8591119685677	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTATTAATTTACTT	5	True	NA	-11	True	AATAAA	-13	NA	69387248	69319779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69326234_69326913_69327076_69328270_69328439_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_78268.known	chr2	-	5906	18	FSM	ENSG00000198380.13	ENST00000674507.1	5906	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	161.010799354113	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCATAGTCACATTGAATT	119	False	NA	NA	False	NA	NA	NA	69387188	69322277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69326234_69326913_69327076_69329296_69329425_69329683_69329799_69337897_69338056_69338444_69338566_69342151_69342250_69345903_69346000_69348170_69348335_69350077_69350184_69354488_69354569_69356495_69356558_69358328_69358464_69359267_69359327_69363544_69363671_69370000_69370109_69374005_69374114_69387064
transcript_7827.known	chr1	-	2790	26	FSM	ENSG00000060718.22	ENST00000461720.6	2790	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	18.5223756575662	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGTATGTGACCTTT	2	True	NA	NA	False	AATAAA	-18	NA	103108485	103001013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_103001202_103001924_103001970_103002427_103002482_103002746_103002792_103003214_103003269_103004443_103004489_103004607_103004662_103005837_103005892_103006067_103006122_103006261_103006316_103008462_103008517_103012412_103012470_103014510_103014595_103015667_103015743_103017819_103017883_103018817_103018860_103021706_103021770_103022741_103022997_103025520_103025614_103025799_103025953_103026215_103026333_103031115_103031245_103074617_103074781_103078657_103078872_103082804_103082973_103108072
transcript_78279.known	chr2	-	1034	8	FSM	ENSG00000169599.13	ENST00000303698.7	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	118.802185096376	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTTGCTTTACC	540	False	NA	-21	True	AATAAA	-29	NA	69437475	69396119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437270
transcript_78284.known	chr2	-	1058	7	FSM	ENSG00000169599.13	ENST00000394305.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	155.271804695293	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTTTACCTCATATG	387	False	NA	-14	True	AATAAA	-36	NA	69437628	69396112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437270
transcript_78288.known	chr2	-	898	8	FSM	ENSG00000169599.13	ENST00000410022.7	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_5	22.0315173127509	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	4	True	NA	-27	True	AATAAA	-23	NA	69437435	69396125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
transcript_78289.known	chr2	-	598	6	FSM	ENSG00000169599.13	ENST00000471185.5	598	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	145.618130739273	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGCTTTACCTCATA	4	True	NA	-16	True	AATAAA	-34	NA	69437435	69396114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69396291_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
transcript_7829.nic	chr1	+	1933	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	17.950549357115	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	103525666	103555239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_78292.known	chr2	-	453	2	FSM	ENSG00000115977.21	ENST00000492192.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCTAGAAACCATC	112	False	NA	NA	False	AAGAAA	-37	NA	69643845	69643092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69643275_69643574
transcript_78293.known	chr2	-	567	2	FSM	ENSG00000115977.21	ENST00000495239.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTGGGGCTCAATGCGC	-3	True	NA	NA	False	NA	NA	NA	69643960	69642876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69643275_69643791
transcript_78294.known	chr2	-	577	2	FSM	ENSG00000115977.21	ENST00000471775.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGTGGACGAGGTGTT	7	True	NA	NA	False	NA	NA	NA	69643950	69642905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69643275_69643742
transcript_78300.known	chr2	+	1414	13	FSM	ENSG00000196975.16	ENST00000409920.5	1414	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	41.8876639225547	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTACTTTGTGT	-2	True	NA	9	True	AATAAA	-23	NA	69741973	69825781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806433_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_78303.known	chr2	+	2651	13	FSM	ENSG00000196975.16	ENST00000394295.6	2651	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	25.7826114960365	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGAATACTTGCCTTT	0	True	NA	NA	False	ATTAAA	-35	NA	69742133	69827112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806499_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_78328.known	chr2	+	4161	14	FSM	ENSG00000087338.5	ENST00000282570.4	4161	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_8	37.9724284902057	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTGAAAGCTTTGTG	-13	True	NA	4	True	AATAAA	-37	NA	69829659	69881384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69830153_69837546_69837671_69839456_69839554_69840941_69841040_69843148_69843262_69844130_69844197_69847542_69847628_69849651_69849743_69854822_69854961_69861277_69861348_69864899_69864976_69869718_69869865_69871744_69871833_69878908
transcript_78331.known	chr2	+	1425	6	FSM	ENSG00000124380.11	ENST00000244227.8	1425	6	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	20.4215572373901	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTATGTTTCATTA	-1	True	NA	14	True	ATTAAA	-33	NA	69893955	69905236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253
transcript_78332.known	chr2	+	766	7	FSM	ENSG00000124380.11	ENST00000450162.6	766	7	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_6	148.531422040366	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGATAAATATTTTTAT	7	True	NA	10	True	AATAAA	-21	NA	69893963	69904671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253_69904426_69904511
transcript_78333.known	chr2	+	1339	5	FSM	ENSG00000124380.11	ENST00000409116.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	193.154083570604	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCATTACATACATA	2	True	NA	-4	True	ATTAAA	-15	NA	69893958	69905218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69904253
transcript_7834.nic	chr1	+	557	5	ISM	ENSG00000185946.16	ENST00000531883.5	686	6	-30	631	-24	-631	5prime_fragment	FALSE	canonical	3	24	junction_1	27.6891224129621	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGGTTATTTAACAGT	NA	False	NA	NA	False	GATAAA	-10	NA	103525666	103534810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773
transcript_7836.nic	chr1	+	519	4	ISM	ENSG00000185946.16	ENST00000531883.5	686	6	-30	1585	-24	-1585	5prime_fragment	FALSE	canonical	3	24	junction_1	31.8468557666565	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATGTAGATCAGTAAATC	NA	False	NA	NA	False	NA	NA	NA	103525666	103533856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738
transcript_78386.known	chr2	-	1498	6	FSM	ENSG00000179818.16	ENST00000664533.1	1498	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	6.36867333123626	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGAGGGAGGGGGGAG	8305	False	NA	NA	False	NA	NA	NA	70087014	70049207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70050253_70051202_70051306_70055713_70055911_70059642_70059681_70085546_70085625_70086977
transcript_78395.known	chr2	-	565	5	FSM	ENSG00000179818.16	ENST00000434781.5	565	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	22.0156194552867	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGACAGAGGTGCTTA	8004	False	NA	NA	False	NA	NA	NA	70087315	69996870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69996889_70032132_70032256_70051202_70051306_70085546_70085625_70087072
transcript_78397.known	chr2	-	3305	5	FSM	ENSG00000179818.16	ENST00000659941.1	3305	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	12.3970762682174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	8420	False	NA	-24	True	NA	NA	NA	70086899	70030014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70085815
transcript_78398.known	chr2	-	2257	5	FSM	ENSG00000179818.16	ENST00000657575.2	2304	5	29	18	0	0	multi-exon	FALSE	canonical	3	28	junction_1	10.0591997693654	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	-16	True	NA	-24	True	NA	NA	NA	70087013	70030014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70086977
transcript_7840.known	chr1	+	2144	15	FSM	ENSG00000185946.16	ENST00000423855.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	13.3630620956212	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	-12	True	NA	NA	False	AATAAA	-21	NA	103525698	103555239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_78400.known	chr2	-	546	5	FSM	ENSG00000179818.16	ENST00000425333.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	14.9227175809234	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAACCCTGAACATTTCAT	7976	False	NA	NA	False	NA	NA	NA	70087343	70031752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70087280
transcript_78413.nic	chr2	-	657	5	NIC	ENSG00000179818.16	novel	743	5	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	5.31507290636732	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGTGGTAATTTGT	8287	False	NA	-3	True	AATAAA	-20	NA	70087032	70048686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_70048958_70051202_70051306_70083537_70083688_70085546_70085625_70086977
transcript_78414.known	chr2	-	743	5	FSM	ENSG00000179818.16	ENST00000413791.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	9.19238815542512	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGTGGTAATTTGT	7898	False	NA	-3	True	AATAAA	-20	NA	70087421	70048686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70048958_70051202_70051306_70083537_70083688_70085546_70085625_70087280
transcript_78419.known	chr2	-	2205	5	FSM	ENSG00000179818.16	ENST00000626558.3	2205	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	6.67083203206317	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGAGGGAGGGGGGAG	8675	False	NA	NA	False	NA	NA	NA	70086644	70049207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70050253_70051202_70051306_70083537_70083688_70085546_70085625_70085815
transcript_7843.known	chr1	+	2621	1	FSM	ENSG00000198890.9	ENST00000370078.2	2621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTAAACTTTGGTTGTA	-15	True	NA	NA	False	ATTAAA	-22	NA	107056673	107059294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_107056700_107059300
transcript_78432.nic	chr2	-	507	4	NIC	ENSG00000179818.16	novel	605	4	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	11.0855260988773	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGTGGTAATTTGT	8287	False	NA	-3	True	AATAAA	-20	NA	70087032	70048686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_70048958_70051202_70051306_70085546_70085625_70086977
transcript_78442.known	chr2	-	1388	4	FSM	ENSG00000179818.16	ENST00000660404.2	1397	4	9	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	11.0855260988773	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACATGTACCCTAAAACTT	-15	True	NA	NA	False	NA	NA	NA	70087012	70049080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70050253_70051202_70051306_70085546_70085625_70086977
transcript_78447.known	chr2	-	2688	8	FSM	ENSG00000179818.16	ENST00000661989.1	2688	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.3010745380378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAAAGACTGGAGT	3	True	NA	-24	True	NA	NA	NA	70086273	70030014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70053730_70053813_70055713_70055911_70059642_70059681_70085546_70085625_70086123
transcript_78448.known	chr2	-	2105	5	FSM	ENSG00000179818.16	ENST00000655481.1	2105	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	8.64580823289529	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCATATAGTTTGTGGTAA	9014	False	NA	-8	True	AATAAA	-15	NA	70086305	70048691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70050253_70051202_70051306_70083506_70083688_70085546_70085625_70086123
transcript_78449.known	chr2	-	2393	5	FSM	ENSG00000179818.16	ENST00000425601.6	2393	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	10.6301458127346	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGAGTTTGCATCTAT	-9	True	NA	-14	True	ATTAAA	-9	NA	70086285	70030004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70086123
transcript_78450.known	chr2	-	1543	1	FSM	ENSG00000244617.3	ENST00000320256.6	1543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAATGTGTTGATTGA	-1	True	NA	2	True	AATAAA	-19	NA	69961631	69960088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69960100_69961600
transcript_78451.known	chr2	+	1727	1	FSM	ENSG00000169564.7	ENST00000303577.7	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4078	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTTGGTGCCTTTTT	-3	True	NA	61	True	AAAAAG	-21	NA	70087476	70089203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_70087500_70089200
transcript_78452.known	chr2	-	662	2	FSM	ENSG00000231327.2	ENST00000414141.2	679	2	15	2	15	0	multi-exon	FALSE	canonical	3	40	junction_1	0	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTCATACTTCTTT	1	True	NA	0	True	AAAAAG	-18	NA	70125317	70124035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70124426_70125045
transcript_78458.known	chr2	-	3823	13	FSM	ENSG00000116001.17	ENST00000282574.8	3823	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	126.124938057467	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-3	True	NA	-8	True	ATTAAA	-22	NA	70248580	70210203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78468.known	chr2	-	4633	12	FSM	ENSG00000116001.17	ENST00000415783.6	4633	12	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_8	133.50030179184	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-28	True	NA	0	True	AATAAA	-25	NA	70248660	70209443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78477.known	chr2	-	2524	10	FSM	ENSG00000115998.8	ENST00000264434.7	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	8.47800349197124	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	-4	True	NA	NA	False	AATAAA	-24	NA	70191019	70149884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
transcript_78479.nic	chr2	-	1193	10	ISM	ENSG00000116001.17	ENST00000282574.8	3823	13	-190	5915	-110	0	5prime_fragment	FALSE	canonical	3	344	junction_5	61.3920813649528	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTTGAACATTTAC	9396	False	NA	-3	True	AATAAA	-27	NA	70248770	70216118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_7848.known	chr1	-	4249	10	FSM	ENSG00000085491.17	ENST00000565488.6	4249	10	0	0	0	0	multi-exon	TRUE	canonical	3	307	junction_8	37.8254601042574	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACTTTACAGTATTT	15	True	NA	-11	True	AATAAA	-15	NA	108200343	108134042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
transcript_78487.known	chr2	-	821	8	FSM	ENSG00000116001.17	ENST00000416149.6	821	8	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_3	64.280317233765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGACATTCGTGGGG	9712	False	NA	NA	False	ATTAAA	-18	NA	70248454	70216671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78490.nic	chr2	-	1012	8	ISM	ENSG00000116001.17	ENST00000474809.6	915	9	-112	7574	-110	2	5prime_fragment	FALSE	canonical	3	38	junction_1	193.581285990445	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGTTTTGTCTGTTTA	9396	False	NA	-5	True	AATAAA	-17	NA	70248770	70224421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_70224630_70225327_70225394_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78491.known	chr2	-	904	8	FSM	ENSG00000116001.17	ENST00000477044.6	904	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	202.257161019514	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	21	True	NA	-7	True	AATAAA	-15	NA	70248611	70224423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70224630_70227734_70227823_70228343_70228463_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78493.nic	chr2	-	1047	8	NIC	ENSG00000116001.17	novel	915	9	NA	NA	-110	-778	combination_of_known_junctions	FALSE	canonical	3	28	junction_3	222.572253803715	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTCTAGTATTT	9396	False	NA	NA	False	TATAAA	-36	NA	70248770	70225203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_70225394_70227734_70227823_70228343_70228463_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78496.nic	chr2	-	942	7	ISM	ENSG00000116001.17	ENST00000416149.6	821	8	-316	7754	-110	0	5prime_fragment	FALSE	canonical	3	344	junction_2	69.4278202323984	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTCTGTTTTGTCTG	9396	False	NA	-9	True	AATAAA	-13	NA	70248770	70224425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78500.nic	chr2	-	928	7	ISM	ENSG00000116001.17	ENST00000474809.6	915	9	-112	8356	-110	-778	5prime_fragment	FALSE	canonical	3	74	junction_1	158.218906020179	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGTGTCTAGTATTT	9396	False	NA	NA	False	TATAAA	-36	NA	70248770	70225203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_70225394_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78501.nic	chr2	-	909	6	ISM	ENSG00000116001.17	ENST00000445587.5	1440	10	-160	12109	-110	0	5prime_fragment	FALSE	canonical	3	72	junction_2	170.806791434064	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTCTGTTTTGTCTG	9396	False	NA	-9	True	AATAAA	-13	NA	70248770	70224425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_78507.known	chr2	-	549	4	FSM	ENSG00000116001.17	ENST00000481650.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	241.629652337806	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATACATGTTTGCAGTAATG	10	True	NA	NA	False	TATAAA	-4	NA	70248622	70229189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70229319_70230755_70230855_70236072_70236176_70248404
transcript_78508.known	chr2	-	543	5	FSM	ENSG00000116001.17	ENST00000361692.4	543	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	179.377395454388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTCTTCTGTTTTGTCTG	6318	False	NA	-9	True	AATAAA	-13	NA	70236175	70224425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078
transcript_78509.known	chr2	+	5339	6	FSM	ENSG00000116005.12	ENST00000433351.7	5339	6	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_4	38.160712781603	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTGCTTCTG	12	True	NA	14	True	AATAAA	-15	NA	70258136	70281185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_70258277_70259359_70259567_70261211_70261387_70274958_70275171_70275513_70275667_70276733
transcript_78520.nic	chr2	+	654	3	ISM	ENSG00000116005.12	ENST00000264441.9	2959	6	-71	17644	-59	-13625	5prime_fragment	FALSE	canonical	3	350	junction_1	18	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATTTCTTGTAAGCAT	343	False	NA	NA	False	ATTAAA	-19	NA	70258077	70261459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_70258277_70259359_70259567_70261211
transcript_78529.known	chr2	-	428	4	FSM	ENSG00000143977.14	ENST00000449935.6	428	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	3292.93074462384	1740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	9290	False	NA	-77	True	AATAAA	-17	NA	70292776	70281506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70292674
transcript_78531.known	chr2	-	398	4	FSM	ENSG00000143977.14	ENST00000413456.6	398	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3294.15546418535	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	8842	False	NA	-77	True	AATAAA	-17	NA	70293224	70281506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293152
transcript_78533.known	chr2	-	566	3	FSM	ENSG00000143977.14	ENST00000429728.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_2	3884	3411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTCCTTCTGTCCATC	-16	True	NA	-6	True	ATTAAA	-33	NA	70293740	70281366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70293617
transcript_78535.known	chr2	-	594	4	FSM	ENSG00000143977.14	ENST00000272348.7	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	4036	junction_2	1853.69852517129	30821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-16	True	NA	-1	True	ATTAAA	-38	NA	70293740	70281361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293617
transcript_78536.known	chr2	-	515	5	FSM	ENSG00000143977.14	ENST00000438261.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3345.49453556571	2394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTCTCAGATGTTCTG	-18	True	NA	-75	True	AATAAA	-19	NA	70293448	70281504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70291280_70291310_70293290
transcript_78537.known	chr2	-	527	5	FSM	ENSG00000143977.14	ENST00000454893.1	527	5	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	2017.79748426347	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	13	True	NA	-77	True	AATAAA	-17	NA	70293711	70281506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70287264_70287372_70288067_70288193_70289349_70289373_70293617
transcript_78538.known	chr2	-	936	4	FSM	ENSG00000035141.8	ENST00000450256.1	936	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1064.45009277091	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCCTGTAACAAGCCAGA	10	True	NA	NA	False	NA	NA	NA	70302056	70297010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70300981_70301407_70301604_70301924
transcript_7854.known	chr1	-	1244	8	FSM	ENSG00000162639.16	ENST00000420055.1	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	17.3569958841514	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCACAGAGGTTGAGAA	257	False	NA	NA	False	NA	NA	NA	108661180	108648799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
transcript_7855.known	chr1	-	1874	8	FSM	ENSG00000162639.16	ENST00000370032.9	1874	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	11.1446884941955	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	NA	False	NA	-5	True	AATAAA	-26	NA	108661526	108648294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108661183
transcript_78550.known	chr2	-	2107	3	FSM	ENSG00000035141.8	ENST00000430566.6	2107	3	0	0	0	0	multi-exon	TRUE	canonical	2	29	junction_2	1131	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-1	True	NA	-3	True	AATAAA	-22	NA	70302067	70295975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70300981_70301603
transcript_78551.known	chr2	-	518	3	FSM	ENSG00000035141.8	ENST00000438759.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	1130.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTGGGAGTAAGGAG	72	False	NA	-98	True	NA	NA	NA	70301994	70297425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70300981_70301669
transcript_78552.known	chr2	-	2398	3	FSM	ENSG00000035141.8	ENST00000460307.1	2398	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	1114.5	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	10	True	NA	-3	True	AATAAA	-22	NA	70302056	70295975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70301604_70301924
transcript_78555.known	chr2	-	1810	3	FSM	ENSG00000035141.8	ENST00000037869.7	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	2222	junction_2	34.5	5843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTCTTCTTTCCTTA	NA	False	NA	-2	True	AATAAA	-23	NA	70302090	70295974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70300981_70301924
transcript_78556.known	chr2	-	561	2	FSM	ENSG00000035141.8	ENST00000498665.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	2222	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATACAAAAAATTAGCC	54	False	NA	NA	False	NA	NA	NA	70302012	70300507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70300981_70301924
transcript_78558.nic	chr2	-	701	2	ISM	ENSG00000163235.16	ENST00000394241.3	568	4	29	58090	29	430	5prime_fragment	FALSE	canonical	3	15	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCGGTATTTTTTTTT	246	False	NA	NA	False	AGTAAA	-9	NA	70553944	70514428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_70514913_70553727
transcript_7856.nic	chr1	-	1569	7	NIC	ENSG00000162639.16	novel	1662	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	22.408455745296	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	-12	True	NA	-5	True	AATAAA	-26	NA	108661099	108648294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108660962
transcript_78562.known	chr2	-	2654	17	FSM	ENSG00000075340.23	ENST00000355733.7	2654	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	43.6247761455575	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGAACCCCCTCCTTCC	14	True	NA	-50	True	AAAAAG	-3	NA	70768177	70663482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70663736_70672877_70673007_70673240_70673327_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_78563.known	chr2	-	9290	16	FSM	ENSG00000075340.23	ENST00000264436.9	9290	16	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_10	12.3486391512947	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCCCCATCTCTG	-9	True	NA	-13	True	AGTAAA	-22	NA	70768200	70656783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_78566.known	chr2	-	3776	13	FSM	ENSG00000075340.23	ENST00000413157.6	3776	13	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	11.6054943884352	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGAGCATCCTTTGA	89	False	NA	-9	True	AATAAA	-16	NA	70768212	70675092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_78573.nic	chr2	+	1222	10	NIC	ENSG00000124357.13	novel	1801	10	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	76.7281556962189	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	NA	False	NA	22	True	AATAAA	-22	NA	71068253	71078641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_71068337_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_78581.known	chr2	+	2343	9	FSM	ENSG00000124357.13	ENST00000418807.7	2343	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	82.3634286258167	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTTTGTCTACTCCC	-7	True	NA	NA	False	AATAAA	-12	NA	71068587	71079805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71068713_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_7859.known	chr1	-	822	6	FSM	ENSG00000162639.16	ENST00000493676.1	822	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	31.2896148905671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGCCAAGGCGGAAAG	23	True	NA	NA	False	NA	NA	NA	108661064	108648893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108657450_108657580_108660962
transcript_78592.known	chr2	+	878	7	FSM	ENSG00000124357.13	ENST00000443872.6	878	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	92.4602016485411	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTTTTACAAAAACAAAC	-3	True	NA	-34	True	NA	NA	NA	71068591	71078585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71068713_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_78593.known	chr2	+	2185	7	FSM	ENSG00000144031.12	ENST00000272421.10	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCCGCCAGGAAATCCAAG	NA	False	NA	NA	False	AATAAA	-19	NA	70978379	70985499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_70978816_70979096_70979344_70979660_70979861_70981935_70982101_70982576_70982698_70984122_70984250_70984610
transcript_78599.known	chr2	-	3365	6	FSM	ENSG00000144043.12	ENST00000272438.9	3365	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	9.69535971483266	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-23	True	NA	NA	False	AATAAA	-16	NA	70994873	70985941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70991829_70991984_70993695_70993776_70994687
transcript_786.known	chr1	-	798	4	FSM	ENSG00000175756.14	ENST00000321751.9	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	1605.00557285291	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCGGGTCTGGAGCTC	17	True	NA	-25	True	AATAAA	-20	NA	1375169	1373731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375074
transcript_78605.known	chr2	-	758	5	FSM	ENSG00000144043.12	ENST00000433258.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	51.9681392778306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTCAGTCCTCCCCTGT	18	True	NA	NA	False	NA	NA	NA	70994832	70988353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70993695_70993776_70994687
transcript_78609.known	chr2	+	1907	14	FSM	ENSG00000116039.13	ENST00000234396.10	1907	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.745796901140974	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCGTTGAAAACAAGATT	13	True	NA	NA	False	AATAAA	-27	NA	70935899	70965431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_70936073_70943657_70943714_70958045_70958145_70958332_70958427_70959017_70959096_70959938_70960079_70960920_70961023_70961595_70961694_70962776_70962901_70963161_70963313_70963571_70963655_70964437_70964543_70964735_70964866_70964957
transcript_7861.nnic	chr1	-	1476	6	NIC	ENSG00000162639.16	novel	1874	8	NA	NA	150	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	28.5517074795887	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	61	True	NA	-5	True	AATAAA	-26	NA	108661376	108648294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_108648992_108650210_108650389_108651029_108651210_108657450_108657580_108659863_108659963_108661183
transcript_78611.known	chr2	+	2371	10	FSM	ENSG00000124357.13	ENST00000244204.11	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	17.8885438199983	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTCTACTCCCCTC	0	True	NA	NA	False	AATAAA	-15	NA	71068647	71079808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_78612.known	chr2	+	546	3	FSM	ENSG00000124357.13	ENST00000480411.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATTTGGAAAATGTGAA	2	True	NA	NA	False	NA	NA	NA	71068649	71071138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71068713_71070501_71070587_71070740
transcript_78613.known	chr2	+	424	2	FSM	ENSG00000124357.13	ENST00000498022.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAATTGGACTGCATTAT	5217	False	NA	16	True	AATAAA	-16	NA	71077530	71078635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71077637_71078317
transcript_78626.nic	chr2	-	734	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	32.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGTAATTGAATGTAATG	1219	False	NA	-11	True	AATAAA	-18	NA	71130298	71109683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_71110123_71124367_71124544_71130179
transcript_78628.known	chr2	-	824	3	FSM	ENSG00000124370.11	ENST00000244217.6	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	14	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	14	True	NA	-14	True	AATAAA	-15	NA	71130229	71109686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_71110123_71124205_71124544_71130179
transcript_78634.known	chr2	-	523	2	FSM	ENSG00000124370.11	ENST00000413592.5	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGTAATTGAATGTAATG	7066	False	NA	-11	True	AATAAA	-18	NA	71124451	71109683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_71110123_71124367
transcript_78636.known	chr2	+	2164	11	FSM	ENSG00000124383.9	ENST00000244230.7	2164	11	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	31.9795246994073	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	-4	True	NA	16	True	AATAAA	-17	NA	71130633	71150101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222_71149454_71149865
transcript_78645.known	chr2	+	2068	5	FSM	ENSG00000124383.9	ENST00000498451.2	2068	5	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_4	17.6971042829046	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTCATCTCATTGACT	-6	True	NA	NA	False	ATTAAA	-21	NA	71130631	71139425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489
transcript_78647.nic	chr2	+	1028	2	ISM	ENSG00000124383.9	ENST00000498451.2	2068	5	-337	5960	-337	297	5prime_fragment	FALSE	canonical	3	321	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGGAACGAAAAGATGA	NA	False	NA	NA	False	AAAACA	-9	NA	71130294	71133465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_71130755_71132897
transcript_78648.known	chr2	+	483	2	FSM	ENSG00000124383.9	ENST00000468427.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAGAGGCTGATGACAA	-4	True	NA	NA	False	NA	NA	NA	71130633	71133168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71130846_71132897
transcript_78651.known	chr2	-	6300	4	FSM	ENSG00000124374.9	ENST00000244221.9	6300	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	17.5562587763516	1644	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCAGTGGTACCCT	-20	True	NA	-26	True	AATAAA	-13	NA	71227103	71182737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_71188536_71189844_71190022_71202451_71202601_71226927
transcript_78657.known	chr2	+	3518	13	FSM	ENSG00000075292.19	ENST00000410075.5	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	191.515157508631	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCGGCTCCAGCTTATC	7	True	NA	1	True	AATAAA	-2	NA	71276592	71395670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71388622_71388724_71393393_71393646_71395246
transcript_78660.nic	chr2	+	3559	13	NIC	ENSG00000075292.19	novel	6487	28	NA	NA	-3	84	combination_of_known_junctions	FALSE	canonical	3	48	junction_10	189.513558588532	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGTGTCTGTGTACTTT	-23	True	NA	13	True	NA	NA	NA	71331756	71395754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71388622_71388724_71393393_71393646_71395246
transcript_78674.nnic	chr2	+	3164	9	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	196.97699738802	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71417244_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_78686.nnic	chr2	+	833	6	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	314.520206028166	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71417159_71418601_71418640_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_78687.nnic	chr2	+	918	6	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	306.162309894605	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71417244_71418601_71418640_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_78693.nnic	chr2	+	813	5	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	326.684480806787	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71417244_71418601_71418640_71431326_71431429_71433164_71433284_71434741
transcript_78695.nic	chr2	+	691	4	ISM	ENSG00000075292.19	ENST00000475743.1	590	5	-74	1149	-40	-1123	5prime_fragment	FALSE	canonical	3	55	junction_1	219.8125464016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATCTGACCCACATGCC	NA	False	NA	NA	False	ATTAAA	-17	NA	71331687	71364365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953
transcript_78696.nic	chr2	+	1241	2	ISM	ENSG00000075292.19	ENST00000466330.5	746	6	-55	8819	-3	7249	5prime_fragment	FALSE	canonical	3	47	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAGTAAGA	4	True	NA	NA	False	NA	NA	NA	71276589	71356794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_71276755_71355718
transcript_78699.known	chr2	+	931	2	FSM	ENSG00000075292.19	ENST00000437658.2	931	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGGTAGTGAAGCAGT	NA	False	NA	NA	False	AATAAA	-4	NA	71331727	71349545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71331866_71348752
transcript_787.known	chr1	-	1598	12	FSM	ENSG00000221978.13	ENST00000488340.5	1598	12	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	366.946367148711	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGGGTTGCAGTGACTG	-5	True	NA	NA	False	NA	NA	NA	1399328	1387231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_78703.nic	chr2	+	579	2	ISM	ENSG00000075292.19	ENST00000264447.9	6487	28	-25	85849	-3	71	5prime_fragment	FALSE	canonical	3	168	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTTCATGAAGCACA	-23	True	NA	NA	False	AAGAAA	-3	NA	71331756	71349212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_71331876_71348752
transcript_78705.known	chr2	-	5910	22	FSM	ENSG00000144036.16	ENST00000272427.11	5910	22	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	22.9871303834408	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGTTGTCTCATGGGTAT	-7	True	NA	-3	True	ATTAAA	-33	NA	72826033	72175983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_72179462_72184074_72184188_72334946_72335021_72379728_72379871_72465159_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_78707.nic	chr2	-	1299	8	ISM	ENSG00000144036.16	ENST00000410104.1	5795	18	-7	97731	-7	-59279	5prime_fragment	FALSE	canonical	3	153	junction_2	16.5480130134671	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTGTTTTTAGTTTAA	-22	True	NA	NA	False	AATAAA	-36	NA	72826048	72559206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_78708.nic	chr2	-	1103	8	ISM	ENSG00000144036.16	ENST00000410104.1	5795	18	-7	97927	-7	-59475	5prime_fragment	FALSE	canonical	3	153	junction_2	16.5480130134671	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTCTCAACTTTTG	-22	True	NA	NA	False	AATAAA	-21	NA	72826048	72559402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_78709.known	chr2	+	326	1	FSM	ENSG00000228568.1	ENST00000412637.1	326	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGAGATGTAATACATAT	NA	False	NA	NA	False	AAAACA	-30	NA	72288784	72289110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_72288800_72289100
transcript_78710.nic	chr2	+	1679	2	ISM	ENSG00000116096.6	ENST00000234454.6	1432	3	330	0	330	0	3prime_fragment	FALSE	canonical	3	103	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGCTTGCTTTCTCCTC	335	False	NA	15	True	AATAAA	-18	NA	72887737	72892158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_72888605_72891346
transcript_78714.known	chr2	+	959	2	FSM	ENSG00000135638.14	ENST00000464675.2	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGATGCATTTCTGT	6355	False	NA	NA	False	NA	NA	NA	72923987	72934239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_72924494_72933786
transcript_78715.known	chr2	-	4016	14	FSM	ENSG00000144040.13	ENST00000272433.7	4016	14	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	38.6506121877158	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	9	True	NA	-2	True	AATAAA	-17	NA	73071712	72942035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_78722.known	chr2	-	840	12	FSM	ENSG00000144040.13	ENST00000410065.5	840	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	59.9870509442808	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTCAGCGGCCTGGGG	-3	True	NA	NA	False	NA	NA	NA	73071724	72945021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_72945100_72961130_72961249_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_78727.nic	chr2	-	1621	6	ISM	ENSG00000144040.13	ENST00000416579.5	895	11	-449	46266	-449	0	5prime_fragment	FALSE	canonical	3	177	junction_4	22.9381777829016	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAGAAAA	8697	False	NA	NA	False	NA	NA	NA	73072177	73019446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_78728.nic	chr2	-	542	6	ISM	ENSG00000144040.13	ENST00000416579.5	895	11	-9	46905	-9	0	5prime_fragment	FALSE	canonical	3	177	junction_4	22.9381777829016	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATCTCTTGATGCTGAT	-16	True	NA	-4	True	AATAAA	-18	NA	73071737	73020085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_78732.known	chr2	-	1690	3	FSM	ENSG00000144040.13	ENST00000472259.5	1690	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	9	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	18	True	NA	NA	False	TATAAA	-30	NA	73071266	73049085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73049900_73058527_73058597_73070459
transcript_78733.nic	chr2	-	1027	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	106.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	9127	False	NA	NA	False	TATAAA	-30	NA	73071747	73049085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_78734.nic	chr2	-	859	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-28	-177	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	106.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGGCCCTCTTGCCGT	9118	False	NA	NA	False	AATAAA	-15	NA	73071756	73049262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_78737.known	chr2	-	351	3	FSM	ENSG00000144040.13	ENST00000484123.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	86	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTTGCTGACTGTT	9212	False	NA	-1	True	AATAAA	-39	NA	73071662	73053328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73053552_73058527_73058597_73071603
transcript_78738.known	chr2	-	895	11	FSM	ENSG00000144040.13	ENST00000416579.5	895	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.4096146438992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCCTCCTGCTTTTCTT	-7	True	NA	NA	False	AATACA	-14	NA	73071728	72973180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_72973428_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_78739.known	chr2	+	420	2	FSM	ENSG00000272702.1	ENST00000608612.1	420	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTTAAGTGTTCACT	13	True	NA	5	True	AATAAA	-13	NA	73113017	73113630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73113207_73113399
transcript_78740.nic	chr2	+	2691	13	NIC	ENSG00000135632.12	novel	2554	13	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	68.829650829663	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	NA	False	NA	30	True	AATAAA	-14	NA	73214206	73227221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_73214363_73218860_73218970_73219951_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_78741.known	chr2	+	2554	13	FSM	ENSG00000135632.12	ENST00000389501.9	2554	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	23.4003501873132	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	-8	True	NA	30	True	AATAAA	-14	NA	73214244	73227221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_78744.nic	chr2	+	2698	12	ISM	ENSG00000135632.12	ENST00000389501.9	2554	13	-38	-12	-15	12	intron_retention	FALSE	canonical	3	229	junction_2	14.9423133173123	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGCTTTGTGGCAAGTG	NA	False	NA	42	True	AATAAA	-26	NA	73214206	73227233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630
transcript_78750.known	chr2	-	1090	5	FSM	ENSG00000135617.4	ENST00000258083.3	1090	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	13.729530217746	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGTGTCCTAGAATAA	2	True	NA	-9	True	AATAAA	-42	NA	73233239	73228009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73228575_73228794_73228963_73229460_73229571_73230112_73230214_73233093
transcript_78753.known	chr2	+	2031	13	FSM	ENSG00000135624.17	ENST00000539919.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1314.8033017232	11968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	780	False	NA	-12	True	AATAAA	-30	NA	73234235	73253021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73235549_73235646_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_78756.known	chr2	+	1674	10	FSM	ENSG00000135624.17	ENST00000540468.5	1674	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	1075.64689694787	22447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	780	False	NA	-12	True	AATAAA	-30	NA	73234235	73253021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_78761.known	chr2	+	1234	7	FSM	ENSG00000135624.17	ENST00000398422.2	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1329.56091331771	14963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	-1	True	NA	24	True	AATAAA	-13	NA	73234307	73253004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_78764.known	chr2	+	1847	12	FSM	ENSG00000135624.17	ENST00000258091.10	1847	12	0	0	0	0	multi-exon	FALSE	canonical	3	3200	junction_5	259.388569046645	37365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTTTGTAAATTATTT	-1	True	NA	25	True	AATAAA	-14	NA	73234307	73253005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_78766.nnic	chr2	+	280	2	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATTGTCTTGGTTTCA	NA	False	NA	NA	False	NA	NA	NA	73284494	73286099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_73284583_73285907
transcript_78769.known	chr2	+	12844	23	FSM	ENSG00000116127.20	ENST00000613296.6	12844	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.9501842444998	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATAGTAAACAATTCTTT	-2	True	NA	56	True	AATAAA	-14	NA	73385835	73609916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73386193_73408621_73408748_73419122_73419319_73422856_73422975_73424429_73424903_73426452_73426554_73432197_73432292_73447959_73454068_73455161_73455296_73489633_73491499_73519774_73520017_73534823_73534950_73550266_73550438_73557219_73557355_73558971_73559143_73572261_73573425_73599400_73599522_73600677_73600882_73601194_73601437_73602184_73602369_73603240_73603305_73608474_73608575_73609567
transcript_7877.known	chr1	+	3728	7	FSM	ENSG00000134186.12	ENST00000370021.1	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	124.691619606131	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCTTTTTTCTTTTT	11	True	NA	11	True	ATTAAA	-17	NA	108692340	108701803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_78794.known	chr2	-	664	5	FSM	ENSG00000144034.16	ENST00000272424.11	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_4	179.769991934138	5899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTGTGCATTATAGAAA	-1	True	NA	NA	False	ATTAAA	-34	NA	73737345	73729872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_78795.known	chr2	-	592	5	FSM	ENSG00000144034.16	ENST00000484969.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	407.766170740046	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCGCTGGAATTACAG	-14	True	NA	93	True	NA	NA	NA	73737358	73729233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_78796.known	chr2	-	816	6	FSM	ENSG00000144034.16	ENST00000409716.6	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	425.898109880755	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	NA	False	NA	NA	False	ATTAAA	-17	NA	73737400	73729889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734589_73737301
transcript_78797.known	chr2	-	730	2	FSM	ENSG00000144034.16	ENST00000485758.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	6230	False	NA	NA	False	ATTAAA	-17	NA	73731149	73729889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73730030_73730559
transcript_78798.known	chr2	-	798	4	FSM	ENSG00000144034.16	ENST00000497464.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_3	198.415389188104	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGAAATTTGGTTTTT	4	True	NA	-7	True	AATAAA	-19	NA	73737340	73730263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73730737_73732162_73732286_73734428_73734592_73737301
transcript_788.known	chr1	-	3082	6	FSM	ENSG00000221978.13	ENST00000418865.6	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	1209	junction_5	64.8740317846825	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAGCTATGTATGAA	9716	False	NA	-47	True	AATAAA	-15	NA	1392525	1386712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765
transcript_78800.known	chr2	-	1653	9	FSM	ENSG00000144048.10	ENST00000272444.7	1653	9	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	14.8318702461962	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGGTATTTTTGTG	NA	False	NA	1	True	NA	NA	NA	73780157	73762183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73762860_73766417_73766595_73766827_73766904_73767160_73767208_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_78804.known	chr2	-	787	8	FSM	ENSG00000144048.10	ENST00000480948.5	787	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	86.2469165376067	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTTCAGGTCTAATCAG	214	False	NA	NA	False	NA	NA	NA	73779878	73762593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73762860_73766827_73766904_73767160_73767208_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_78806.known	chr2	-	2175	6	FSM	ENSG00000144048.10	ENST00000443070.5	2175	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100.073972640242	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCTGGAGTTGGGTCA	NA	False	NA	NA	False	AATAAA	-11	NA	73780121	73767418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73768953_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_7881.known	chr1	+	4831	6	FSM	ENSG00000134186.12	ENST00000370025.9	4831	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	41.5162618741139	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCAATCTTAAACTTT	-20	True	NA	NA	False	ATTAAA	-20	NA	108692309	108702928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_78814.known	chr2	+	6316	11	FSM	ENSG00000124356.17	ENST00000684585.1	6316	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	117.519360107176	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-7	True	NA	3	True	AATAAA	-16	NA	73828966	73867152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_78817.known	chr2	+	1778	11	FSM	ENSG00000124356.17	ENST00000684716.1	1778	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	171.353319197499	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAACCATTCCCTGT	9	True	NA	NA	False	NA	NA	NA	73828982	73873601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73870142_73870353_73873351
transcript_78818.known	chr2	+	6053	10	FSM	ENSG00000124356.17	ENST00000683149.1	6053	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	148.508136701888	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-31	True	NA	3	True	AATAAA	-16	NA	73828942	73867152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_78819.known	chr2	+	6207	10	FSM	ENSG00000124356.17	ENST00000683434.1	6207	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	153.101112397278	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-7	True	NA	3	True	AATAAA	-16	NA	73828966	73867152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847389_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_78820.known	chr2	+	6403	10	FSM	ENSG00000124356.17	ENST00000684337.1	6403	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	149.889177167996	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	NA	False	NA	3	True	AATAAA	-16	NA	73828921	73867152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_78824.known	chr2	+	6261	10	FSM	ENSG00000124356.17	ENST00000682351.1	6261	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	112.631925391001	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	16	True	NA	3	True	AATAAA	-16	NA	73828989	73867152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_78827.known	chr2	+	6019	9	FSM	ENSG00000124356.17	ENST00000682851.1	6019	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	128.841411723871	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	-31	True	NA	3	True	AATAAA	-16	NA	73828942	73867152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_78840.known	chr2	+	2040	13	FSM	ENSG00000124356.17	ENST00000682379.1	2040	13	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	144.761777490546	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCCTTTTTCTTTTGTGT	13	True	NA	NA	False	ATTAAA	-25	NA	73828986	73873659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73862305_73870142_73870353_73873351
transcript_78841.known	chr2	+	2360	12	FSM	ENSG00000124356.17	ENST00000684312.1	2360	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_10	147.189314200712	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAGAAAGAATATTCC	13	True	NA	NA	False	ATTAAA	-11	NA	73828986	73873645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202_73862305_73870142_73870353_73873351
transcript_78842.known	chr2	+	2144	12	FSM	ENSG00000124356.17	ENST00000682799.1	2144	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	148.447892741878	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAACAATTAACTTATG	9	True	NA	9	True	AATAAA	-28	NA	73828982	73862866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73860533_73860590_73862202
transcript_78843.nnic	chr2	+	1048	7	NIC	ENSG00000163017.14	novel	1413	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	15.4137384606504	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGGGCTATGTCTCATA	NA	False	NA	36	True	ATTAAA	-37	NA	73892979	73919675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_73893052_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
transcript_78844.known	chr2	+	927	4	FSM	ENSG00000163017.14	ENST00000409918.5	927	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	16.7597401199687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTGATTAACTCTGGT	NA	False	NA	NA	False	AATAGA	-13	NA	73892981	73903189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73893052_73901275_73901438_73902359_73902489_73902623
transcript_78848.known	chr2	+	1075	7	FSM	ENSG00000114956.20	ENST00000264093.9	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	628.723773475549	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-1	True	NA	17	True	AATAAA	-15	NA	73926879	73958946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_78857.known	chr2	+	1029	6	FSM	ENSG00000114956.20	ENST00000629438.2	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_3	639.592807964567	2398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTTGCTCATTTATT	7224	False	NA	30	True	AATAAA	-28	NA	73926825	73958959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73927053_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_78878.known	chr2	+	880	5	FSM	ENSG00000114956.20	ENST00000348222.3	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	744.793385778902	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGCTCATTTATTTC	7224	False	NA	32	True	AATAAA	-30	NA	73926825	73958961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73958145_73958246_73958709
transcript_78886.known	chr2	+	703	4	FSM	ENSG00000114956.20	ENST00000418996.5	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_2	508.732411653383	4390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	-6	True	NA	17	True	AATAAA	-15	NA	73926874	73958946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73927053_73946718_73946907_73958145_73958246_73958709
transcript_78888.nnic	chr2	+	704	4	NIC	ENSG00000114956.20	novel	1075	7	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	111	junction_1	880.571153033959	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	7200	False	NA	17	True	AATAAA	-15	NA	73926801	73958946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_73927053_73957124_73957241_73958145_73958246_73958709
transcript_78893.known	chr2	-	563	2	FSM	ENSG00000237883.3	ENST00000413452.2	745	2	179	3	8	-3	multi-exon	TRUE	canonical	3	12	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGAGGTTTCTCTTC	8	True	NA	-1	True	AATAAA	-16	NA	73981433	73957969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73958208_73981108
transcript_78894.known	chr2	-	419	2	FSM	ENSG00000237883.3	ENST00000439192.2	553	2	85	49	52	-49	multi-exon	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGCATTTAAAAAAACA	4957	False	NA	-47	True	AAGAAA	-9	NA	73981361	73958015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73958208_73981134
transcript_78898.known	chr2	-	555	4	FSM	ENSG00000163170.12	ENST00000327428.10	555	4	0	0	0	0	multi-exon	TRUE	canonical	3	1184	junction_1	216.750240292062	4337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTTTCAGGTTCC	-14	True	NA	-2	True	ATTAAA	-33	NA	74147912	74135399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74135659_74142271_74142361_74145188_74145304_74147820
transcript_78903.known	chr2	-	444	3	FSM	ENSG00000163170.12	ENST00000295326.4	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_1	525.5	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGGGTCATTAGT	-7	True	NA	-17	True	ATTAAA	-18	NA	74147905	74135414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74135659_74145188_74145304_74147820
transcript_78905.known	chr2	+	3520	3	FSM	ENSG00000225439.4	ENST00000656407.1	3520	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCACTTTGGGGCCG	44	False	NA	NA	False	NA	NA	NA	74148078	74151952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74148224_74148349_74148479_74148706
transcript_78910.known	chr2	+	1804	2	FSM	ENSG00000225439.4	ENST00000423477.2	1804	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTTTTGCTTATCTCTA	4	True	NA	42	True	NA	NA	NA	74148038	74150061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74148479_74148697
transcript_78914.known	chr2	+	631	2	FSM	ENSG00000225439.4	ENST00000529783.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTGGCCTTCAGAAT	-26	True	NA	4	True	NA	NA	NA	74148008	74149054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74148479_74148893
transcript_78918.known	chr2	-	4896	6	FSM	ENSG00000114978.18	ENST00000396049.5	4896	6	0	0	0	0	multi-exon	FALSE	canonical	3	968	junction_2	76.1666593727203	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGGATTTTTGAGT	-28	True	NA	NA	False	AATATA	-20	NA	74178879	74152527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
transcript_78926.known	chr2	-	493	2	FSM	ENSG00000114978.18	ENST00000494600.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCAGAAACACAGTATT	-28	True	NA	NA	False	TATAAA	-33	NA	74178879	74178007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74178282_74178660
transcript_78928.known	chr2	+	2463	9	FSM	ENSG00000065911.13	ENST00000489041.2	2463	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	519.757154832908	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	-1	True	NA	NA	False	NA	NA	NA	74198612	74215525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_78931.known	chr2	+	2276	8	FSM	ENSG00000065911.13	ENST00000679055.1	2276	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	580.702213896667	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGATTACAGGCCT	1	True	NA	NA	False	NA	NA	NA	74198614	74215525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74201381_74201480_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_78934.known	chr2	+	1396	7	FSM	ENSG00000065911.13	ENST00000470592.5	1396	7	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	422.25456381982	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGATTTATCTAAG	-1	True	NA	NA	False	NA	NA	NA	74198612	74214741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_78936.known	chr2	+	4033	6	FSM	ENSG00000065911.13	ENST00000677377.1	4033	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	546.395314767614	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACATGAATGGGAGTT	1	True	NA	-39	True	NA	NA	NA	74198614	74217503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_7894.known	chr1	+	2043	5	FSM	ENSG00000134186.12	ENST00000467302.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	134.444226354277	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	-3	True	NA	NA	False	NA	NA	NA	108692326	108697504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276
transcript_78941.known	chr2	+	4403	8	FSM	ENSG00000065911.13	ENST00000394053.7	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	147.596941509156	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATGTATCATGAAATG	1	True	NA	23	True	AATAAA	-27	NA	74198614	74217565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_78942.known	chr2	+	1757	5	FSM	ENSG00000065911.13	ENST00000409804.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	541.035292286927	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCTATGACTCC	-4	True	NA	43	True	AATAAA	-35	NA	74198609	74215298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74205704_74205890_74211198_74211292_74211740_74211867_74214078
transcript_78943.known	chr2	+	2320	10	FSM	ENSG00000065911.13	ENST00000678228.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_3	632.577228974679	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTATGAATTTCTGAAAT	3	True	NA	24	True	AATAAA	-16	NA	74198616	74215279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74205981_74206089_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_78944.known	chr2	+	1243	2	FSM	ENSG00000065911.13	ENST00000677558.1	1243	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTCTGGTATGGTATG	5675	False	NA	12	True	AATAAA	-4	NA	74212074	74215267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74212129_74214078
transcript_78945.known	chr2	-	4365	28	FSM	ENSG00000204843.13	ENST00000409240.5	4365	28	0	0	0	0	multi-exon	TRUE	canonical	3	817	junction_18	108.316522912261	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTGTGGTGTTGA	-29	True	NA	-6	True	ATTAAA	-17	NA	74392087	74361156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_78959.known	chr2	+	1046	10	FSM	ENSG00000005448.17	ENST00000480089.5	1046	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	175.95580253133	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGGCTATGACCT	14	True	NA	-78	True	NA	NA	NA	74421758	74425650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74421817_74422119_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_7896.nic	chr1	+	2023	4	ISM	ENSG00000134186.12	ENST00000370022.9	1591	5	-30	0	-16	0	intron_retention	TRUE	canonical	3	245	junction_2	41.6519974177576	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	-36	True	NA	NA	False	NA	NA	NA	108692293	108697504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276
transcript_78974.nic	chr2	+	945	9	NIC	ENSG00000005448.17	novel	1147	10	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	182.291276190058	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-1	True	NA	27	True	CATAAA	-17	NA	74421708	74425755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_78975.known	chr2	+	854	9	FSM	ENSG00000005448.17	ENST00000409791.5	854	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	232.599676214306	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGTCTGATTACTCA	-16	True	NA	26	True	CATAAA	-16	NA	74421728	74425754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425639
transcript_78983.known	chr2	+	1147	10	FSM	ENSG00000005448.17	ENST00000348227.4	1147	10	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	59.5932716394339	3751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-15	True	NA	27	True	CATAAA	-17	NA	74421729	74425755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_78984.known	chr2	+	1862	7	FSM	ENSG00000005448.17	ENST00000465134.5	1862	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	213.146272154437	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	-1	True	NA	27	True	CATAAA	-17	NA	74421743	74425755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74425074_74425238_74425416_74425492_74425569
transcript_78985.known	chr2	+	864	8	FSM	ENSG00000005448.17	ENST00000469321.5	864	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	192.208008072887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCAGCCTTCCTTTGTCCC	-4	True	NA	-24	True	NA	NA	NA	74422174	74425704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74425096_74425238_74425416_74425492_74425569
transcript_78986.known	chr2	+	545	2	FSM	ENSG00000005448.17	ENST00000475328.5	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAACCTCTTCTCTACTAAG	-15	True	NA	NA	False	NA	NA	NA	74421729	74422610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74421817_74422152
transcript_78987.known	chr2	-	2646	13	FSM	ENSG00000114993.17	ENST00000305557.9	2646	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	141.412418910866	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGCCTCACATCATCC	-47	True	NA	20	True	NA	NA	NA	74440583	74425835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74439550_74439978_74440352
transcript_78991.known	chr2	-	2220	12	FSM	ENSG00000114993.17	ENST00000233330.6	2220	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_11	107.203136132737	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	1785	False	NA	-27	True	ATTAAA	-15	NA	74440631	74425882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74440352
transcript_78992.known	chr2	-	2221	12	FSM	ENSG00000114993.17	ENST00000272430.10	2221	12	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_3	40.7793903545155	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-21	True	NA	21	True	NA	NA	NA	74441937	74425834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_790.known	chr1	-	1186	6	FSM	ENSG00000221978.13	ENST00000408918.8	1186	6	0	0	0	0	multi-exon	FALSE	canonical	3	903	junction_1	190.28189614359	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGATTTCATTTGTTT	6	True	NA	-41	True	AATACA	-18	NA	1399317	1392287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_79002.nnic	chr2	-	1999	11	NIC	ENSG00000114993.17	novel	2221	12	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	121.228090804071	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	-16	True	NA	-27	True	ATTAAA	-15	NA	74441932	74425882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_74426575_74427168_74427274_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_79008.known	chr2	-	820	2	FSM	ENSG00000114993.17	ENST00000484453.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCTAGTGTGCAAC	-3	True	NA	NA	False	NA	NA	NA	74442419	74432560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74432667_74441705
transcript_7901.nic	chr1	+	1028	3	ISM	ENSG00000143107.10	ENST00000370017.9	3090	13	-46	24099	-46	-23406	5prime_fragment	FALSE	canonical	3	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAACTTTGTTGTGAA	NA	False	NA	NA	False	NA	NA	NA	108712861	108718650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_108712997_108713510_108713530_108717776
transcript_79017.known	chr2	+	1325	5	FSM	ENSG00000239779.7	ENST00000393972.7	1325	5	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	296.397115370578	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGTGGACTAAAGCT	93	False	NA	24	True	ATTAAA	-24	NA	74458399	74460891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74458996_74459099_74459642_74459746_74459872_74460050_74460220
transcript_79019.known	chr2	+	597	5	FSM	ENSG00000239779.7	ENST00000464774.6	597	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	314.565076732939	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCAAGCCCCCAGCCT	6	True	NA	72	True	NA	NA	NA	74458449	74460230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459477_74459563_74459642_74459746_74459872_74460050_74460220
transcript_79024.known	chr2	+	1175	4	FSM	ENSG00000239779.7	ENST00000233615.7	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	58.5396351960694	2930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGTGGATTTGGGTG	-6	True	NA	14	True	ATTAAA	-14	NA	74458437	74460881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459642_74459746_74459872_74460050_74460220
transcript_79026.known	chr2	+	1069	5	FSM	ENSG00000239779.7	ENST00000494741.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	312.074810742553	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGGTTACTTGCCCAC	30	False	NA	NA	False	GGGGCT	-44	NA	74458473	74460696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459437_74459553_74459642_74459746_74459872_74460050_74460220
transcript_79031.known	chr2	+	1110	4	FSM	ENSG00000239779.7	ENST00000409737.5	1110	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	298.588159324661	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCATTAAAGAGATGTG	25	False	NA	-11	True	NA	NA	NA	74458468	74460856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459651_74459746_74459872_74460050_74460220
transcript_79036.known	chr2	+	765	4	FSM	ENSG00000239779.7	ENST00000470536.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	281.64319428825	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGTCTGTACCGCAGA	6	True	NA	NA	False	NA	NA	NA	74458449	74460617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458538_74459642_74459746_74459872_74460050_74460220
transcript_79040.known	chr2	+	847	3	FSM	ENSG00000239779.7	ENST00000473467.5	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	69.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGCCCGGGGCAGGGGT	44	False	NA	NA	False	NA	NA	NA	74458487	74460432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459642_74459746_74459872
transcript_7905.known	chr1	+	2489	19	FSM	ENSG00000116266.11	ENST00000370008.4	2489	19	0	0	0	0	multi-exon	FALSE	canonical	1	92	junction_9	68.2316316348624	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	-10	True	NA	6	True	AATAAA	-17	NA	108746673	108809523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779411_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108807400_108807550_108808782
transcript_79052.known	chr2	+	817	3	FSM	ENSG00000239779.7	ENST00000466303.1	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	318.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTGGCCTATCATGGG	68	False	NA	NA	False	NA	NA	NA	74458511	74459980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74459118_74459642_74459746_74459872
transcript_79053.known	chr2	+	2047	4	FSM	ENSG00000239779.7	ENST00000484744.5	2047	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	294.822357059675	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGGATTTGGGTGGA	15	False	NA	16	True	ATTAAA	-16	NA	74458458	74460883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74459563_74459642_74459746_74459872_74460050_74460220
transcript_79059.known	chr2	+	2916	13	FSM	ENSG00000115282.21	ENST00000233623.11	2916	13	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_8	27.1855762410061	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	2	True	NA	10	True	AATAAA	-18	NA	74483080	74494559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_79063.known	chr2	+	958	9	FSM	ENSG00000115282.21	ENST00000442235.6	958	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	51.6368025249434	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCACCGAAGCCACCCCAA	8	True	NA	NA	False	NA	NA	NA	74483086	74493083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491629_74492966
transcript_79067.known	chr2	-	2433	5	FSM	ENSG00000115275.15	ENST00000452063.7	2433	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	92.2831918607067	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAACCTTCCTCATTT	-16	True	NA	-122	True	NA	NA	NA	74465396	74461178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895_74464988_74465313
transcript_79069.known	chr2	-	2269	4	FSM	ENSG00000115275.15	ENST00000647915.1	2269	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	103.289237903407	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGAATGTGAATCCAGA	-20	True	NA	-63	True	NA	NA	NA	74465400	74461119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74463013_74463189_74463387_74464895_74464988_74465313
transcript_79071.known	chr2	+	431	2	FSM	ENSG00000115282.21	ENST00000463704.5	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTGTGCCTGTAATCT	10	True	NA	NA	False	NA	NA	NA	74483088	74483705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74483136_74483321
transcript_79073.known	chr2	-	386	2	FSM	ENSG00000204822.7	ENST00000409710.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTTTCTGGAACAAGA	-20	True	NA	-50	True	AATAAA	-19	NA	74472687	74471985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74472253_74472568
transcript_79074.known	chr2	-	574	2	FSM	ENSG00000204822.7	ENST00000468875.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACCACAATGTTTCTGG	3	True	NA	-57	True	AATAAA	-12	NA	74472664	74471992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74472471_74472568
transcript_79075.known	chr2	-	496	3	FSM	ENSG00000204822.7	ENST00000258105.8	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	10.5	5768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGGAACAAGACTAG	-13	True	NA	-46	True	AATAAA	-23	NA	74472680	74471981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74472253_74472357_74472471_74472568
transcript_79076.known	chr2	-	451	2	FSM	ENSG00000204822.7	ENST00000467349.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	0	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCACAATGTTTCTGGA	120	False	NA	-56	True	AATAAA	-13	NA	74472547	74471991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74472253_74472357
transcript_79077.known	chr2	-	2126	3	FSM	ENSG00000115275.15	ENST00000648810.1	2126	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGAATGTGAATCCAGA	-24	True	NA	-63	True	NA	NA	NA	74465404	74461119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74463013_74463189_74463332_74465313
transcript_79078.known	chr2	-	886	2	FSM	ENSG00000179528.16	ENST00000341396.2	886	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCCGCTATGTTGTCCA	5216	False	NA	-64	True	TTTAAA	-22	NA	74502984	74497581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74498319_74502835
transcript_79079.known	chr2	-	1073	2	FSM	ENSG00000179528.16	ENST00000377566.9	1073	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCTCTATCCAGACGC	-7	True	NA	1	True	AATAAA	-18	NA	74499603	74497516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74498319_74499332
transcript_7908.nnic	chr1	+	2387	18	NIC	ENSG00000116266.11	novel	2489	19	NA	NA	-44	3	combination_of_known_splicesites	FALSE	canonical	1	5	junction_17	95.4363136620329	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGTTTGTGTTTTCTGT	-12	True	NA	9	True	AATAAA	-20	NA	108746629	108809526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779411_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108808782
transcript_79080.known	chr2	+	2083	1	FSM	ENSG00000257702.4	ENST00000603175.1	2083	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGATTTTTCTTTA	-11	True	NA	11	True	TATAAA	-12	NA	74502594	74504677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74502600_74504700
transcript_79082.known	chr2	-	718	9	FSM	ENSG00000115289.14	ENST00000480844.2	718	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.1706693679846	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGCCAAGCCCCCACCC	-6	True	NA	-106	True	AATACA	-21	NA	74507417	74505145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505613_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507357
transcript_79085.nic	chr2	-	866	9	NIC	ENSG00000115289.14	novel	907	9	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	29.7591897571154	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-25	True	NA	-3	True	AATAAA	-16	NA	74507436	74505042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507357
transcript_79086.known	chr2	-	907	9	FSM	ENSG00000115289.14	ENST00000233630.11	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	7.37288105152931	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-7	True	NA	-3	True	AATAAA	-16	NA	74507695	74505042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507575
transcript_79090.known	chr2	-	1056	8	FSM	ENSG00000115289.14	ENST00000475863.5	1056	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	3.95381500088516	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-5	True	NA	-3	True	AATAAA	-16	NA	74507416	74505042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041
transcript_791.known	chr1	-	3112	11	FSM	ENSG00000221978.13	ENST00000400809.8	3112	11	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_6	293.571132777049	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTCTCCTAATT	-12	True	NA	-15	True	CATAAA	-17	NA	1399335	1385710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_79105.known	chr2	-	2584	12	FSM	ENSG00000144045.14	ENST00000404568.4	2584	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.31110955471418	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGTTTGGTCCTGCAG	-6	True	NA	-1	True	TATAAA	-21	NA	74526231	74518130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74518603_74519039_74519231_74519555_74519747_74519914_74520035_74522579_74522772_74522855_74523015_74523118_74523219_74523309_74523538_74523922_74524308_74525008_74525203_74525492_74525749_74526135
transcript_79110.known	chr2	-	2837	10	FSM	ENSG00000115318.12	ENST00000470907.6	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_9	22.286019533929	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAACAGTGTTAAAT	6041	False	NA	NA	False	AATAAA	-44	NA	74549663	74532413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74549368
transcript_79112.known	chr2	+	1294	9	FSM	ENSG00000115317.12	ENST00000462909.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	53.4741467907624	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATTATACCTAG	12	False	NA	-11	True	NA	NA	NA	74529724	74533152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74529913_74530444_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_79115.known	chr2	+	1323	9	FSM	ENSG00000115317.12	ENST00000467961.5	1323	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	55.406311689193	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCTAAACTTAGGGGAG	-4	True	NA	-65	True	NA	NA	NA	74529774	74533247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74529913_74530460_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_79126.known	chr2	+	1785	8	FSM	ENSG00000115317.12	ENST00000258080.8	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	13.2526470209247	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGGGCAGTTAGTC	-37	True	NA	7	True	ATTAAA	-19	NA	74529932	74533319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_79140.known	chr2	+	1918	5	FSM	ENSG00000115325.14	ENST00000233668.10	1918	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	8.64580823289529	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	-17	True	NA	27	True	ATTAAA	-20	NA	74554719	74557551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74555893_74556079_74556307
transcript_79143.known	chr2	+	1722	4	FSM	ENSG00000115325.14	ENST00000340004.6	1722	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	30.2140511829991	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	-6	True	NA	27	True	ATTAAA	-20	NA	74554730	74557551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74556307
transcript_79151.known	chr2	-	1458	12	FSM	ENSG00000115307.17	ENST00000377526.4	1458	12	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_9	69.1563087601002	1979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-11	True	NA	-25	True	ATTAAA	-19	NA	74529706	74526651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_79152.known	chr2	-	1581	12	FSM	ENSG00000115307.17	ENST00000425118.5	1581	12	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_2	237.320684808587	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCTCGGTCTCAA	1196	False	NA	-18	True	ATTAAA	-26	NA	74529760	74526644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_79153.known	chr2	-	1658	11	FSM	ENSG00000115307.17	ENST00000466894.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	247.871922572929	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAATGTCACATTAAAT	10	True	NA	-62	True	AAAAAG	-15	NA	74529685	74526688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_79154.known	chr2	-	1645	11	FSM	ENSG00000115307.17	ENST00000463900.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_2	58.4808515669873	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-2	True	NA	-25	True	ATTAAA	-19	NA	74529697	74526651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_79155.known	chr2	+	1479	7	FSM	ENSG00000115317.12	ENST00000437202.1	1479	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.3070028487502	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGAGGGCTGGATC	12	True	NA	29	True	AATAAA	-32	NA	74530045	74533192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531566_74531703_74531855_74531926_74532819
transcript_79156.known	chr2	-	2544	11	FSM	ENSG00000159374.18	ENST00000421985.2	2544	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	14.9549322967374	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCTTCAGATTACAC	-8	True	NA	-1	True	AATAAA	-17	NA	74648330	74557882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74558875_74559697_74559710_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_79159.known	chr2	-	2531	10	FSM	ENSG00000159374.18	ENST00000536235.5	2531	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	14.1970262926979	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACACCCTGTGCTTC	-16	True	NA	-10	True	AATAAA	-8	NA	74648338	74557891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74558875_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_79163.known	chr2	-	1333	1	FSM	ENSG00000272711.1	ENST00000610008.1	1333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCCTCTCAGCAAAACT	NA	False	NA	0	True	AATAAA	-17	NA	74833987	74832654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74832700_74834000
transcript_79165.known	chr2	+	528	4	FSM	ENSG00000115350.12	ENST00000465242.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	158.410858213697	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTCAGTCCAGTGTGT	350	False	NA	3	True	AATAAA	-10	NA	74959005	74969723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74959092_74959340_74959426_74960104_74960147_74969408
transcript_79170.known	chr2	-	1828	4	FSM	ENSG00000115363.14	ENST00000393913.8	1828	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGCATGTCCGTCTC	-2	True	NA	NA	False	AATAAA	-17	NA	75560939	75492317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75493610_75518055_75518209_75522364_75522488_75560679
transcript_79171.known	chr2	-	524	3	FSM	ENSG00000115363.14	ENST00000486489.1	524	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTGTTTATCTCTCCC	3	True	NA	-11	True	AATAAA	-16	NA	75561323	75558482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75558700_75560679_75560920_75561256
transcript_79172.known	chr2	-	4367	17	FSM	ENSG00000005436.14	ENST00000321027.8	4367	17	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_10	27.8780127295688	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	-17	True	NA	-3	True	ATTAAA	-21	NA	75710915	75662704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710590
transcript_79179.known	chr2	-	1066	3	FSM	ENSG00000005436.14	ENST00000470503.1	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	19.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGCCTTAAAGGACTG	-1	True	NA	NA	False	AATAAA	-20	NA	75710899	75701795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75702424_75706522_75706652_75710590
transcript_79187.known	chr2	+	1747	1	FSM	ENSG00000270696.1	ENST00000604845.1	1747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGATTTGATTTGCTA	NA	False	NA	13	True	AATAAA	-22	NA	75660461	75662208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_75660500_75662200
transcript_79188.known	chr2	+	7825	6	FSM	ENSG00000115364.14	ENST00000393909.7	7825	6	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_3	19.3142434488126	1932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGGATTTGATTTGC	-9	True	NA	11	True	AATAAA	-20	NA	75646782	75662206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063
transcript_79189.known	chr2	+	1076	7	FSM	ENSG00000115364.14	ENST00000409374.5	1076	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	254.554130894699	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAACCATAATAAATTCT	11	True	NA	NA	False	CATAAA	-40	NA	75646802	75670753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063_75655303_75670578
transcript_79190.known	chr2	+	744	5	FSM	ENSG00000115364.14	ENST00000476622.1	744	5	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_2	17.0953209972788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCAGATTTGATCTTTGT	187	False	NA	NA	False	ATTAAA	-2	NA	75646978	75655130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063
transcript_79191.known	chr2	+	693	6	FSM	ENSG00000115364.14	ENST00000358788.10	693	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	332.436219446678	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGTAAAATGCT	2	True	NA	NA	False	AATAAA	-30	NA	75646793	75690759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75679774_75679853_75690633
transcript_79194.nnic	chr2	-	968	3	NNC	ENSG00000176204.14	novel	596	2	NA	NA	-36	564	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTTAATTGACTCACA	NA	False	NA	NA	False	TATAAA	-13	NA	77593355	77552001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_77552657_77592814_77592936_77593163
transcript_79195.nnic	chr2	-	1057	3	NNC	ENSG00000176204.14	novel	596	2	NA	NA	-9	564	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTTAATTGACTCACA	NA	False	NA	NA	False	TATAAA	-13	NA	77593328	77552001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_77552657_77592814_77593052_77593163
transcript_79196.known	chr2	-	596	2	FSM	ENSG00000176204.14	ENST00000491242.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTAGACAGGACAGAGG	NA	False	NA	NA	False	ATTAAA	-43	NA	77593319	77552565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_77552657_77592814
transcript_79198.nnic	chr2	-	758	3	NNC	ENSG00000227088.2	novel	1159	7	NA	NA	-99539	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGCTATTAAATTTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	77754207	77652412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_77652610_77741520_77741610_77753735
transcript_79199.nnic	chr2	+	1104	7	NNC	ENSG00000115386.6	novel	599	4	NA	NA	-9139	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.74535599249993	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGTCTTACTGTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	79111222	79123409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_79111459_79111603_79111731_79120815_79120926_79121561_79121681_79121987_79122126_79122840_79122953_79123147
transcript_79202.nnic	chr2	+	789	4	NNC	ENSG00000066032.19	novel	3167	17	NA	NA	0	-13618	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	23.6220236220354	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGACGTTTTGGATAC	-5	True	NA	NA	False	AATAAA	-16	NA	79513033	79844448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_79513208_79651551_79651659_79744386_79744583_79844136
transcript_79203.nic	chr2	+	1346	3	ISM	ENSG00000066032.19	ENST00000629316.2	3167	17	-109	902935	-8	960	5prime_fragment	FALSE	canonical	3	45	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAATAAAAAGAAAAAAG	-13	True	NA	NA	False	NA	NA	NA	79513025	79745443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_79513208_79651551_79651659_79744386
transcript_79211.nnic	chr2	+	595	4	Antisense	novelGene_ENSG00000233444.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	15.121728296285	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTTGTTTGCTTATCT	NA	False	NA	5	True	ATTAAA	-18	NA	81596962	81850386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_81597162_81822269_81822375_81848752_81848845_81850187
transcript_79215.nnic	chr2	+	466	3	Antisense	novelGene_ENSG00000233444.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTTGTTTGCTTATCT	NA	False	NA	5	True	ATTAAA	-18	NA	81596957	81850386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_81597180_81716974_81716997_81850164
transcript_79218.nnic	chr2	-	485	3	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACATGCGCTTCTGCTTC	NA	False	NA	NA	False	TTTAAA	-33	NA	81850386	81596960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_81597184_81716956_81716997_81850164
transcript_79220.nnic	chr2	-	831	3	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACATGCGCTTCTGCTTC	NA	False	NA	NA	False	TTTAAA	-33	NA	81850733	81596960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_81597259_81747615_81747640_81850224
transcript_79221.nnic	chr2	+	580	3	Antisense	novelGene_ENSG00000233444.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCAGTTGTTTGCTTATCT	NA	False	NA	5	True	ATTAAA	-18	NA	81596962	81850386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_81597196_81716871_81716997_81850164
transcript_79234.nnic	chr2	-	892	3	NNC	ENSG00000231781.1	novel	488	5	NA	NA	-117	61596	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	7.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTATCTGGTAGTATCT	8023	False	NA	-22	True	AATAAA	-4	NA	82005817	81921675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_81922163_81986430_81986580_82005561
transcript_79236.known	chr2	-	1270	9	FSM	ENSG00000163541.12	ENST00000393868.7	1270	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_8	22.2373559579371	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGGAGGCTTATT	-18	True	NA	-5	True	AATAAA	-19	NA	84459280	84423527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_79237.known	chr2	-	1328	10	FSM	ENSG00000163541.12	ENST00000651342.1	1328	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	129.908609851619	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTACTATTTGATTT	-23	True	NA	-28	True	NA	NA	NA	84459285	84423550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84436051_84436128_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_79238.known	chr2	-	568	6	FSM	ENSG00000163541.12	ENST00000442240.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	150.132474834727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGCCATATTCACAAAA	1	True	NA	NA	False	NA	NA	NA	84459261	84441078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84441105_84441246_84441460_84443283_84443401_84448928_84448948_84449648_84449753_84459172
transcript_79241.nnic	chr2	+	698	4	Fusion	ENSG00000289076.1_ENSG00000115423.19	novel	2065	9	NA	NA	0	-15234	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGGATTTCTTTATAT	1	True	NA	NA	False	ATTAAA	-19	NA	84459571	84529095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_84459671_84517818_84518052_84525564_84525739_84528903
transcript_79243.known	chr2	+	12752	77	FSM	ENSG00000115423.19	ENST00000389394.8	12752	77	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	0.543151774751324	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTCTGCTGTAGAAG	15	True	NA	NA	False	AATAAA	-26	NA	84516497	84819589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_84516584_84517818_84518052_84525564_84525739_84528903_84529167_84544232_84544501_84547267_84547403_84547491_84547613_84548287_84548418_84549888_84550058_84552917_84553035_84557734_84557936_84573466_84573588_84577256_84577409_84579526_84579680_84583998_84584251_84588825_84588955_84593971_84594086_84595645_84595790_84604338_84604552_84605499_84605593_84606975_84607096_84611673_84611855_84616885_84616983_84619684_84619905_84621190_84621356_84621437_84621552_84624264_84624391_84624464_84624621_84624901_84625064_84634503_84634642_84637209_84637378_84640429_84640579_84641946_84642055_84653318_84653875_84654659_84654783_84658291_84658475_84659025_84659170_84669288_84669511_84670327_84670476_84672326_84672485_84677004_84677137_84681356_84681529_84685325_84685473_84686483_84686558_84688438_84688594_84694248_84694481_84697574_84697728_84699593_84699735_84701096_84701340_84703394_84703563_84704066_84704303_84705485_84705748_84706895_84707020_84707519_84707717_84709342_84709547_84710286_84710413_84713094_84713260_84715559_84715628_84718203_84718385_84722624_84722805_84727668_84727903_84733443_84733580_84745079_84745250_84762754_84762946_84781492_84781654_84784721_84784811_84785609_84785757_84787163_84787303_84796305_84796426_84797536_84797659_84805664_84805795_84808414_84808543_84812340_84812527_84813057_84813131_84813970_84814123_84815860_84816084_84819304
transcript_79245.known	chr2	-	1814	7	FSM	ENSG00000186854.11	ENST00000409520.7	1814	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	15.0996688705415	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTTTTGTATAGATT	-17	True	NA	-23	True	AATAAA	-27	NA	84881084	84821665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_79247.known	chr2	-	1844	6	FSM	ENSG00000186854.11	ENST00000335459.9	1844	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	20.6978259727924	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATTCATGATATAT	0	True	NA	-7	True	AATAAA	-43	NA	84881245	84821649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84870224_84870786_84880931
transcript_79251.known	chr2	-	1554	5	FSM	ENSG00000186854.11	ENST00000409133.1	1554	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5099960031968	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGAGGCTCTGTGTA	242	False	NA	NA	False	NA	NA	NA	84881150	84837789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84838242_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_79262.known	chr2	-	582	2	FSM	ENSG00000186854.11	ENST00000489999.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTGAGAATGTTTTG	1	True	NA	NA	False	AATAAA	-19	NA	84907008	84901642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84901879_84906662
transcript_79263.known	chr2	+	461	3	FSM	ENSG00000034510.6	ENST00000233143.6	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	20189	junction_2	1013	181758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCGTGGTCTGAGTC	1	True	NA	19	True	AATAAA	-16	NA	84905655	84906671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_84905719_84906002_84906118_84906388
transcript_79264.known	chr2	+	793	1	FSM	ENSG00000213399.3	ENST00000449856.1	793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGGGTTTTTATACAAGA	6452	False	NA	NA	False	NA	NA	NA	84915867	84916660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_84915900_84916700
transcript_79265.known	chr2	+	7500	7	FSM	ENSG00000176407.18	ENST00000409785.9	7500	7	0	0	0	0	multi-exon	FALSE	non_canonical	3	663	junction_5	46.3752807718365	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTTCCATTGCATTC	15	True	NA	6	True	AATAAA	-15	NA	84971160	85059472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_84971468_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_79266.known	chr2	-	3137	2	FSM	ENSG00000260840.2	ENST00000567718.1	3137	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGCCCACACCATTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	85067347	85064107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85064680_85064782
transcript_79267.known	chr2	-	306	1	FSM	ENSG00000225787.1	ENST00000436601.1	306	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAACAAAGAATTTGTCC	4	False	NA	NA	False	NA	NA	NA	85102694	85102388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85102400_85102700
transcript_79275.known	chr2	-	6050	4	FSM	ENSG00000152291.15	ENST00000377386.8	6050	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	39.9694327649962	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTAATACATTTATTT	-10	True	NA	35	True	AATAAA	-20	NA	85327989	85318026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85322742_85324914_85324999_85326507_85327686_85327916
transcript_79276.known	chr2	-	2235	4	FSM	ENSG00000152291.15	ENST00000409232.7	2235	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.376571027462	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACTCAGTAGGAACTTT	5768	False	NA	-14	True	AATAAA	-33	NA	85328024	85321893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85322759_85324914_85324999_85326507_85327686_85327916
transcript_79277.known	chr2	+	2364	14	FSM	ENSG00000115459.18	ENST00000409013.8	2364	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	14.8782037472795	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	6	True	NA	10	True	AATAAA	-14	NA	85354768	85391748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85354830_85355075_85355171_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_79279.known	chr2	+	2332	13	FSM	ENSG00000115459.18	ENST00000393852.8	2332	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	13.1050774723218	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	-6	True	NA	10	True	AATAAA	-14	NA	85354756	85391748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85354830_85355075_85355171_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_79287.known	chr2	+	2685	11	FSM	ENSG00000115459.18	ENST00000315658.11	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	15.6527952775215	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	40	False	NA	10	True	AATAAA	-14	NA	85354802	85391748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85354830_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137
transcript_79291.known	chr2	-	3141	11	FSM	ENSG00000042445.14	ENST00000295802.9	3141	11	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_9	9.27146158919941	316	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAAGTGGGGTCTGCGCC	2	True	NA	NA	False	AATAAA	-21	NA	85354528	85341954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85343382_85343638_85343799_85343998_85344166_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
transcript_79296.known	chr2	+	4761	12	FSM	ENSG00000115459.18	ENST00000446464.7	4761	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.4454525243542	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	-17	True	NA	10	True	AATAAA	-14	NA	85354745	85391748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85354830_85355075_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85387097_85387226_85389750_85389828_85390137
transcript_79298.nic	chr2	+	1420	2	ISM	ENSG00000115459.18	ENST00000476734.5	521	5	-18	11845	0	-130	5prime_fragment	FALSE	canonical	3	20	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCAACAGAGGCATAACT	-12	True	NA	NA	False	NA	NA	NA	85354750	85356895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_85354830_85355554
transcript_79303.known	chr2	-	1250	10	FSM	ENSG00000042493.16	ENST00000263867.9	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_9	191.37849512174	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	-12	True	NA	-8	True	AATAAA	-34	NA	85410366	85394752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
transcript_7931.known	chr1	-	2008	13	FSM	ENSG00000121940.17	ENST00000675508.1	2008	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	55.523768684131	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGGGGATGAAGTCT	-24	True	NA	NA	False	AATAAA	-32	NA	108963484	108932498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108962308_108962470_108963342
transcript_79311.known	chr2	-	1195	10	FSM	ENSG00000042493.16	ENST00000409921.5	1195	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	256.078113082708	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTCCTGCACCACCT	9167	False	85410384	-22	True	AATAAA	-20	NA	85410370	85394766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399180_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
transcript_79312.known	chr2	-	1151	10	FSM	ENSG00000042493.16	ENST00000409724.5	1151	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	209.449071566925	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGCGTCTTCCTGCCC	5463	False	NA	-148	True	NA	NA	NA	85414074	85394892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413983
transcript_79315.known	chr2	+	3111	8	FSM	ENSG00000152292.18	ENST00000488219.2	3111	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.451753951452626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTACCTTGCACAAGTT	NA	False	NA	NA	False	NA	NA	NA	85430363	85436981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85430435_85430537_85430653_85431209_85431269_85431898_85431960_85433098_85433122_85433570_85433632_85434032_85434112_85434339
transcript_79316.nnic	chr2	+	856	3	NIC	ENSG00000152292.18	novel	2222	24	NA	NA	-459	0	intron_retention	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTGAATCTGCTAAATGA	NA	False	NA	NA	False	AATAAA	-16	NA	85433606	85437029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_85434112_85434339_85434498_85436836
transcript_79317.nic	chr2	+	794	2	ISM	ENSG00000152292.18	ENST00000477170.5	699	7	-459	2399	-459	-2257	5prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACTAGGTGAATGCA	NA	False	NA	NA	False	NA	NA	NA	85433606	85434628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_85434112_85434339
transcript_79318.known	chr2	-	1205	1	FSM	ENSG00000286532.1	ENST00000667933.1	1205	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTAGGCTGGTCAG	708	False	NA	NA	False	AATAAA	-20	NA	85538666	85537461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85537500_85538700
transcript_79319.known	chr2	-	7556	15	FSM	ENSG00000115486.13	ENST00000233838.9	7556	15	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	14.315148248892	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTATTGTGCAG	1	True	NA	-18	True	AATAAA	-16	NA	85561493	85544719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85560814_85560986_85561385
transcript_79324.known	chr2	-	2314	14	FSM	ENSG00000115486.13	ENST00000430215.7	2314	14	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_13	14.251336488764	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGCGGGGTTCTA	1	True	NA	10	True	NA	NA	NA	85561532	85549829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85561385
transcript_7933.known	chr1	-	2383	13	FSM	ENSG00000121940.17	ENST00000369970.8	2383	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	51.94842527824	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTGAAGCTTTTAGGAAA	-44	True	NA	NA	False	NA	NA	NA	108963504	108931985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108943908_108947610_108947719_108949819_108949922_108950308_108950449_108962308_108962470_108963360
transcript_79337.known	chr2	-	684	3	FSM	ENSG00000115486.13	ENST00000496962.2	657	3	-27	0	-15	0	multi-exon	FALSE	canonical	3	136	junction_1	2.5	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTATGTGATTATA	281	False	NA	-9	True	ATTAAA	-18	NA	85561547	85558724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85559076_85560814_85560986_85561385
transcript_79339.known	chr2	-	600	2	FSM	ENSG00000115486.13	ENST00000481541.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTACCGGATAAGCT	1	True	NA	NA	False	NA	NA	NA	85561493	85558583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85559076_85561385
transcript_79340.known	chr2	+	2817	9	FSM	ENSG00000168906.13	ENST00000306434.8	2817	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_8	53.2868123929364	2935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTTACTCATTTGT	1	True	NA	NA	False	AATAAA	-21	NA	85539167	85545281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900_85543035_85543669
transcript_79341.known	chr2	+	583	2	FSM	ENSG00000168906.13	ENST00000465151.5	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTAAACTCCAGTTGT	1	True	NA	NA	False	AAGAAA	-19	NA	85539167	85541454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85539379_85541082
transcript_79343.known	chr2	+	664	3	FSM	ENSG00000118640.11	ENST00000432071.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	354.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTGGGTAATAAAGACC	-1	True	NA	-8	True	NA	NA	NA	85561561	85581997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85561645_85579008_85579168_85581575
transcript_79347.known	chr2	+	679	3	FSM	ENSG00000118640.11	ENST00000263864.10	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_1	24	5958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	3	True	NA	26	True	AATAAA	-19	NA	85577585	85582031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85577650_85579008_85579168_85581575
transcript_79348.known	chr2	+	805	4	FSM	ENSG00000118640.11	ENST00000409760.1	805	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	311.836495619098	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	10	True	NA	26	True	AATAAA	-19	NA	85577592	85582031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85577650_85579008_85579168_85579741_85579875_85581575
transcript_79354.nnic	chr2	+	1005	5	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-62	0	multi-exon	FALSE	canonical	2	4	junction_2	276.434779830614	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	24	True	ATTAAA	-15	NA	85577523	85593406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_85577650_85579008_85579168_85581753_85581877_85591724_85591863_85592947
transcript_79355.nnic	chr2	+	948	5	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-62	0	multi-exon	FALSE	canonical	2	6	junction_2	276.106297465306	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	24	True	ATTAAA	-15	NA	85577523	85593406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_85577650_85579008_85579168_85581810_85581877_85591724_85591863_85592947
transcript_79357.nnic	chr2	+	882	4	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-62	0	multi-exon	FALSE	canonical	3	10	junction_2	298.258277336942	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	24	True	ATTAAA	-15	NA	85577523	85593406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_85577650_85579008_85579168_85591724_85591863_85592947
transcript_79359.nnic	chr2	+	705	3	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	679	3	NA	NA	-44	0	multi-exon	FALSE	canonical	3	12	junction_1	21.5	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	-41	True	NA	24	True	ATTAAA	-15	NA	85577541	85593406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_85577650_85591724_85591863_85592947
transcript_79361.known	chr2	+	660	3	FSM	ENSG00000168899.5	ENST00000306384.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	11.5	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	-1	True	NA	24	True	ATTAAA	-15	NA	85584430	85593406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85584494_85591724_85591863_85592947
transcript_79368.known	chr2	+	685	5	FSM	ENSG00000168894.10	ENST00000306368.9	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	132.822014365089	7144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGACTCATGGCAGTG	-4	True	NA	NA	False	NA	NA	NA	85595744	85597708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103_85597179_85597444
transcript_79369.known	chr2	+	535	5	FSM	ENSG00000168894.10	ENST00000443647.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	784.85189685698	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	7	True	NA	68	True	ATTAAA	-39	NA	85595755	85597604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85595850_85596518_85596650_85596856_85596932_85597103_85597179_85597444
transcript_7937.nnic	chr1	-	2126	12	NIC	ENSG00000121940.17	novel	4803	12	NA	NA	-2	0	intron_retention	TRUE	canonical	3	9	junction_1	45.1139970216864	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGCCGATTTTTTCCC	-46	True	NA	-6	True	AATAAA	-15	NA	108963506	108929936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_108930205_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963360
transcript_79370.known	chr2	+	844	4	FSM	ENSG00000168894.10	ENST00000441634.5	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	1622	junction_2	118.662921289208	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGCTGTATTGATCAC	1	True	NA	45	True	ATTAAA	-16	NA	85595724	85597581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103
transcript_79371.known	chr2	+	559	4	FSM	ENSG00000168894.10	ENST00000456023.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	892.746449011264	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCTGCATCCTCCATCA	68	False	NA	77	True	NA	NA	NA	85595816	85597613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85595850_85596518_85596650_85596952_85597179_85597444
transcript_79377.known	chr2	+	2034	14	FSM	ENSG00000168883.20	ENST00000409470.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_13	193.270574048145	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	5	True	NA	71	True	ATTAAA	-19	NA	85616168	85649280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760_85648854_85649016
transcript_79380.known	chr2	+	2148	13	FSM	ENSG00000168883.20	ENST00000459775.5	2148	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	305.001127047098	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	-22	True	NA	71	True	ATTAAA	-19	NA	85602855	85649280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85603082_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_79381.nic	chr2	+	2141	13	NIC	ENSG00000168883.20	novel	2148	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	25	junction_1	229.060445079459	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	7094	False	NA	71	True	ATTAAA	-19	NA	85602842	85649280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_85603082_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_79382.known	chr2	+	2161	13	FSM	ENSG00000168883.20	ENST00000613444.4	2161	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	234.112627216522	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTGTTTTATATCTT	-11	True	NA	73	True	ATTAAA	-21	NA	85612102	85649282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85612360_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_79384.known	chr2	+	2183	13	FSM	ENSG00000168883.20	ENST00000323701.11	2183	13	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_7	63.8880857437441	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTTTTATATCTTT	22	True	NA	74	True	ATTAAA	-22	NA	85616185	85649283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_7940.known	chr1	-	1937	12	FSM	ENSG00000121940.17	ENST00000674849.1	1937	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	52.2130093665117	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCCAATATGTCATTAA	35	True	NA	-57	True	NA	NA	NA	108963425	108932336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108932502_108934619_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108963360
transcript_79404.known	chr2	-	1553	8	FSM	ENSG00000168890.14	ENST00000334462.10	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	25.8883000915984	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-2	True	NA	-4	True	ATTAAA	-17	NA	85602698	85598546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_79408.known	chr2	-	1810	7	FSM	ENSG00000168890.14	ENST00000444380.5	1810	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	26.9036346160803	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTATATTAAAAGAAT	8	True	NA	-35	True	NA	NA	NA	85602659	85598577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601483_85601883_85602065_85602606
transcript_79412.known	chr2	-	1484	7	FSM	ENSG00000168890.14	ENST00000306353.7	1484	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	36.4356357918392	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTAGCCTGTTCTGG	-2	True	NA	-5	True	ATTAAA	-16	NA	85602698	85598547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_79418.nnic	chr2	-	1467	6	NIC	ENSG00000168890.14	novel	1553	8	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	54.5651903689523	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	9321	False	NA	-4	True	ATTAAA	-17	NA	85602728	85598546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601883_85602065_85602606
transcript_79419.nnic	chr2	-	1324	6	NNC	ENSG00000168890.14	novel	1553	8	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	56.2800142146393	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	9321	False	NA	-4	True	ATTAAA	-17	NA	85602728	85598546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85602026_85602065_85602606
transcript_7942.known	chr1	-	1896	12	FSM	ENSG00000121940.17	ENST00000675956.1	1896	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	44.0791924450933	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGACTAGCCAATAT	33	True	NA	-65	True	NA	NA	NA	108963427	108932344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963400
transcript_79422.known	chr2	-	915	5	FSM	ENSG00000168890.14	ENST00000417791.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	38.8353897881816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTACCAAGGGGCCACC	2	True	NA	NA	False	GGGGCT	-27	NA	85602665	85599617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599703_85599890_85600019_85601020_85601483_85601883_85602065_85602606
transcript_79423.known	chr2	-	1776	7	FSM	ENSG00000168890.14	ENST00000409668.1	1776	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	27.9145521587258	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTTTTTTTTATATTAA	-19	True	NA	-41	True	NA	NA	NA	85602416	85598583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883
transcript_79424.known	chr2	-	4274	4	FSM	ENSG00000168887.11	ENST00000306336.6	4274	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	6.94422221866655	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGCCAAGAGTTGT	-17	True	NA	0	True	AATAAA	-19	NA	85612066	85605253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85609068_85609434_85609587_85611667_85611787_85611877
transcript_79425.known	chr2	-	1722	2	FSM	ENSG00000168887.11	ENST00000409734.3	1722	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGTGAAACCCCATCT	17	True	NA	NA	False	NA	NA	NA	85612032	85610219	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85611787_85611877
transcript_79426.known	chr2	+	449	1	FSM	ENSG00000272564.1	ENST00000608140.1	449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTGTTTGCCCCCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	85904278	85904727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85904300_85904700
transcript_79429.known	chr2	-	6454	34	FSM	ENSG00000068654.17	ENST00000409681.1	6454	34	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	26.2025731427681	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCCTTGGTTTGCAG	NA	False	NA	-18	True	AAGAAA	-26	NA	86106155	86026327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86027524_86027884_86028050_86028593_86028712_86030195_86030397_86031512_86031636_86032271_86032383_86033660_86033788_86038699_86038858_86039326_86039463_86040391_86040560_86041888_86042104_86042973_86043196_86044138_86044305_86045277_86045361_86045616_86045770_86047164_86047264_86048883_86049043_86049159_86049243_86052816_86053001_86054139_86054290_86065273_86065466_86070017_86070273_86075029_86075261_86077858_86077982_86078113_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_79431.known	chr2	-	3156	6	FSM	ENSG00000068654.17	ENST00000684026.1	3156	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	16.4365446490435	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGTCTCTACTAAAAAA	-28	True	NA	NA	False	NA	NA	NA	86105890	86086253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_79434.nic	chr2	-	973	3	ISM	ENSG00000068654.17	ENST00000684026.1	3156	6	-233	12163	32	-8783	5prime_fragment	FALSE	canonical	3	109	junction_2	5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGTGAAATACCATTTA	8	True	NA	NA	False	AATAAA	-18	NA	86106123	86098416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_86098761_86099967_86100173_86105699
transcript_79435.known	chr2	-	1427	10	FSM	ENSG00000068654.17	ENST00000486964.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	16.9246696997148	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAAGCCTACTGGAATT	-11	True	NA	NA	False	AATAAA	-23	NA	86105873	86078040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_79436.known	chr2	-	2670	15	FSM	ENSG00000132305.22	ENST00000449247.6	2670	15	0	0	0	0	multi-exon	FALSE	canonical	1	131	junction_5	186.410686060513	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	28	False	NA	-7	True	AATAAA	-20	NA	86195472	86143931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_79437.known	chr2	-	2627	15	FSM	ENSG00000132305.22	ENST00000442664.6	2627	15	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_10	208.588746834824	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATCTTATCCCTTTT	32	True	NA	-11	True	AATAAA	-16	NA	86195403	86143935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_79438.known	chr2	+	460	1	FSM	ENSG00000273080.1	ENST00000610262.1	460	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTACTGTAGTAACATC	429	False	NA	6	True	NA	NA	NA	86195589	86196049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86195600_86196000
transcript_79439.known	chr2	+	1061	5	FSM	ENSG00000132313.15	ENST00000254644.12	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	116.983706130384	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGATGTTCGATTAT	4194	False	NA	22	True	AATAAA	-22	NA	86199354	86212838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86212425
transcript_79442.known	chr2	+	651	5	FSM	ENSG00000132313.15	ENST00000409180.1	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	103.588126732749	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTGCCGATGATTT	-8	True	NA	-33	True	NA	NA	NA	86199462	86213738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86213627
transcript_79443.known	chr2	+	3723	4	FSM	ENSG00000132313.15	ENST00000337109.9	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	8.17856276425687	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	-14	True	NA	19	True	AATAAA	-15	NA	86199456	86213790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479
transcript_79449.known	chr2	+	4667	26	FSM	ENSG00000115548.17	ENST00000312912.10	4667	26	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	14.0089114495024	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	-3	True	NA	15	True	ATTAAA	-15	NA	86441370	86492716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
transcript_79450.known	chr2	+	4928	27	FSM	ENSG00000115548.17	ENST00000409556.5	4928	27	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	24.6641644074386	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	NA	False	NA	15	True	ATTAAA	-15	NA	86440800	86492716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86440963_86441271_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
transcript_79453.nnic	chr2	+	664	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	-73	-6597	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	55	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTATATGTTGATTTC	NA	False	NA	NA	False	AATAAA	-24	NA	86441297	86443290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_86441445_86442017_86442234_86442989
transcript_79454.nnic	chr2	+	1316	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	-73	-5945	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	55	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTATGTGATTTGA	NA	False	NA	15	True	AATAAA	-16	NA	86441297	86443942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_86441445_86442017_86442234_86442989
transcript_79472.known	chr2	-	3138	6	FSM	ENSG00000115561.16	ENST00000263856.9	3138	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	11.8558002682231	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTCTCGTTTGACTG	37	False	86563462	1	True	AATAAA	-28	NA	86563443	86503429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86542251_86542313_86563303
transcript_79474.known	chr2	-	727	6	FSM	ENSG00000115561.16	ENST00000393773.7	727	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	58.933861234438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTCTCAAGAGCTGCCA	314	False	NA	NA	False	GGGGCT	-25	NA	86563166	86505774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86542251_86542313_86563092
transcript_79477.known	chr2	-	1099	5	FSM	ENSG00000115561.16	ENST00000409225.2	1099	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	53.1666013583716	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTGTAGATTGCCCTG	1	True	NA	-3	True	AATAAA	-20	NA	86563479	86505443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86563303
transcript_79484.nic	chr2	-	639	4	NIC	ENSG00000115561.16	novel	436	3	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	71.1867653117878	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAGCTCCTTTAATACA	NA	False	NA	NA	False	TATAAA	-19	NA	86563507	86527047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_86527242_86529217_86529398_86542251_86542313_86563303
transcript_79486.known	chr2	-	920	3	FSM	ENSG00000115561.16	ENST00000485465.1	920	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	78	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCAAATTAGACACTACAG	-21	True	NA	NA	False	ATTAAA	-25	NA	86563440	86540642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86541365_86542251_86542313_86563303
transcript_79489.known	chr2	+	6183	9	FSM	ENSG00000153561.13	ENST00000283632.5	6183	9	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_8	69.3217137699293	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGGAACCAGTCTGTA	-7	True	NA	18	True	ATTAAA	-22	NA	86720290	86778041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86720810_86740926_86741070_86751895_86752031_86753457_86753559_86765026_86765194_86765858_86766025_86770022_86770126_86771557_86771713_86773347
transcript_79492.known	chr2	-	4794	6	FSM	ENSG00000172116.23	ENST00000390655.12	4794	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.0976176963403	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTGGCCATTGTTAT	-3	True	NA	NA	False	ATTAAA	-15	NA	86861886	86838166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86842320_86844921_86844959_86846683_86846774_86852996_86853087_86858056_86858417_86861822
transcript_79495.known	chr2	-	2217	11	FSM	ENSG00000285793.1	ENST00000648819.1	2217	11	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_10	127.579622197277	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTTTGGTTTGA	-2	True	NA	NA	False	AATAAA	-20	NA	87076429	87030674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
transcript_79497.known	chr2	+	1277	4	FSM	ENSG00000287931.1	ENST00000667385.1	1277	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTATTGTTCTGTCAGT	NA	False	NA	NA	False	AATAAA	-21	NA	87075652	87118267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87075747_87094190_87094422_87116534_87116585_87117365
transcript_79498.nic	chr2	+	755	3	ISM	ENSG00000204745.4	ENST00000454465.2	3795	31	63587	-230	63587	230	3prime_fragment	FALSE	canonical	3	399	junction_2	67.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATGATTGCTTTAGT	NA	False	NA	NA	False	AATAAA	-22	NA	87188784	87196859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_87189059_87193442_87193578_87196513
transcript_79499.nnic	chr2	-	411	2	NNC	ENSG00000287763.1	novel	1417	3	NA	NA	-3	-33465	at_least_one_novel_splicesite	FALSE	canonical	3	86	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTTGTATGTTTACTTA	441	False	NA	NA	False	ATTAAA	-30	NA	87348731	87344924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_87345263_87348658
transcript_79500.known	chr2	+	772	4	FSM	ENSG00000222041.12	ENST00000414584.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	16	False	NA	6	True	ATTAAA	-23	NA	87455495	87521518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87455646_87478121_87478231_87480222_87480424_87521206
transcript_79501.known	chr2	+	594	3	FSM	ENSG00000222041.12	ENST00000643589.1	594	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	25	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAGAAAACAGAATTGTT	NA	False	NA	-9	True	ATTAAA	-8	NA	87455237	87521503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87455453_87455563_87455646_87521206
transcript_79502.nic	chr2	+	683	3	NIC	ENSG00000222041.12	novel	772	4	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_2	0.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	-4	True	NA	6	True	ATTAAA	-23	NA	87455475	87521518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_87455646_87480222_87480424_87521206
transcript_79504.known	chr2	+	529	2	FSM	ENSG00000222041.12	ENST00000331944.10	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	-1	True	NA	6	True	ATTAAA	-23	NA	87455428	87521518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87455646_87521206
transcript_79505.known	chr2	+	607	2	FSM	ENSG00000222041.12	ENST00000644040.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGAATTGTTTGCTT	74	False	NA	-4	True	ATTAAA	-13	NA	87455668	87521508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87455974_87521206
transcript_79506.known	chr2	+	419	2	FSM	ENSG00000222041.12	ENST00000645729.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGAATTGTTTGCTT	5184	False	NA	-4	True	ATTAAA	-13	NA	87487501	87521508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87487619_87521206
transcript_79507.known	chr2	+	2638	18	FSM	ENSG00000284879.1	ENST00000643276.1	2638	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	220.137720341052	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATTCAGAAATAAAATAA	-4	True	NA	NA	False	NA	NA	NA	87455475	87739214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87455646_87583257_87583347_87606592_87606770_87700983_87701054_87704332_87704601_87707761_87707911_87713358_87713438_87714047_87714085_87714178_87714250_87716611_87716791_87719806_87720022_87722300_87722420_87725936_87726209_87732386_87732622_87735673_87735766_87737717_87737853_87738022_87738106_87739016
transcript_79511.known	chr2	-	6926	23	FSM	ENSG00000185304.16	ENST00000398146.5	6770	23	-156	0	-156	0	multi-exon	FALSE	canonical	3	46	junction_15	41.8741966741744	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAACGTGAATCATTTAAA	NA	False	NA	NA	False	ATTAAA	-15	NA	87825952	87755959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_87757427_87772168_87772365_87774943_87775084_87782123_87784348_87785074_87785170_87788721_87788840_87791989_87792074_87792161_87792342_87793221_87793369_87793630_87793769_87794034_87794194_87795116_87795241_87795407_87795584_87795666_87795849_87797964_87798175_87800604_87800693_87806695_87806892_87811484_87811631_87811975_87812207_87816268_87816422_87816865_87816978_87818558_87818624_87825657
transcript_79512.nnic	chr2	+	1970	3	NNC	ENSG00000287670.1	novel	845	2	NA	NA	0	1372	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_2	9	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	NA	False	NA	6	True	ATTAAA	-16	NA	88016779	88022823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_88016869_88020695_88021450_88021696
transcript_79513.known	chr2	+	851	3	FSM	ENSG00000287670.1	ENST00000665969.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTTGTGTGCCCATAGT	NA	False	NA	NA	False	AATAGA	-25	NA	88016815	88021401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88016869_88020509_88020602_88020695
transcript_79514.nnic	chr2	+	2322	3	NNC	ENSG00000287670.1	novel	939	2	NA	NA	35	1372	at_least_one_novel_splicesite	FALSE	non_canonical	2	7	junction_2	1.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	NA	False	NA	6	True	ATTAAA	-16	NA	88016850	88022823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_88017292_88020695_88021450_88021696
transcript_79515.known	chr2	+	845	2	FSM	ENSG00000287670.1	ENST00000662935.1	845	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATCGAGACCATCCCGG	NA	False	NA	NA	False	ATTAAA	-18	NA	88016779	88021451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88016869_88020695
transcript_79516.known	chr2	+	939	2	FSM	ENSG00000287670.1	ENST00000662952.1	939	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTATTAATAATAGATT	NA	False	NA	NA	False	TTTAAA	-39	NA	88017016	88021359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88017292_88020695
transcript_79519.nnic	chr2	-	1754	4	NNC	ENSG00000172086.9	novel	1807	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	41.6119640915393	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	77	False	NA	-2	True	AATAAA	-16	NA	88055791	88027204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_88028586_88034133_88034232_88036942_88037052_88055625
transcript_79520.known	chr2	-	1807	4	FSM	ENSG00000172086.9	ENST00000347055.4	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	4.02768199119819	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	-10	True	NA	-2	True	AATAAA	-16	NA	88055783	88027204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_88028586_88034133_88034293_88036942_88037052_88055625
transcript_79522.nnic	chr2	-	591	5	NNC	ENSG00000288734.1	novel	638	2	NA	NA	-31980	-287	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTATATTTTGTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	88170569	88137205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_88137302_88138334_88138427_88138531_88138718_88169651_88169771_88170471
transcript_79528.nnic	chr2	-	494	3	NNC	ENSG00000288734.1	novel	638	2	NA	NA	-32188	-287	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGTATATTTTGTCCT	NA	False	NA	NA	False	AATAAA	-16	NA	88170777	88137205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_88137302_88138334_88138427_88170471
transcript_79530.known	chr2	-	1208	2	FSM	ENSG00000172071.15	ENST00000668866.1	1208	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGTCCTTCGTTTTGTA	5	True	NA	NA	False	NA	NA	NA	88691464	88690176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_88691316_88691395
transcript_79533.known	chr2	+	1614	2	FSM	ENSG00000234028.4	ENST00000453008.3	1616	2	0	2	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTTTTGTGTCTTAC	578	False	NA	6	True	AATAAA	-14	NA	88627538	88631819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88628733_88631399
transcript_79538.known	chr2	+	1813	9	FSM	ENSG00000153574.9	ENST00000283646.5	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	16.0307322041134	2616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	0	True	NA	14	True	AATAAA	-15	NA	88691672	88750929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88691984_88698483_88698545_88700008_88700065_88729277_88729338_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_79546.known	chr2	-	523	1	FSM	ENSG00000211592.8	ENST00000390237.2	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCTTTCCTCATT	-13	True	NA	-1	True	AATAAA	-23	NA	88857683	88857160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_88857200_88857700
transcript_79552.known	chr2	-	622	4	FSM	ENSG00000283196.2	ENST00000636560.1	622	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	41.8807831827438	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGACTGAATGCTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	89585608	89562334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_89562685_89580557_89580636_89581005_89581141_89585549
transcript_79553.nnic	chr2	-	816	4	NNC	ENSG00000283196.2	novel	622	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	44.1537717024894	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGACTGAATGCTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	89585657	89562334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_89562830_89580557_89580636_89581005_89581141_89585549
transcript_79555.known	chr2	-	774	3	FSM	ENSG00000283196.2	ENST00000637196.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	42	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATGATGTGAGCATCC	NA	False	NA	NA	False	GGGGCT	-15	NA	89585596	89562092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_89562685_89581005_89581141_89585549
transcript_79557.known	chr2	-	1196	3	FSM	ENSG00000283196.2	ENST00000636531.1	1196	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	40	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGAGTCAGATCCCG	NA	False	NA	NA	False	ATTAAA	-13	NA	89585615	89542841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_89543837_89581005_89581141_89585549
transcript_79560.nic	chr2	-	546	3	ISM	ENSG00000283196.2	ENST00000636560.1	622	4	-49	17998	-5	225	5prime_fragment	FALSE	canonical	3	18	junction_1	42	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCGAGCGTAGGGGC	NA	False	NA	NA	False	AATACA	-14	NA	89585657	89580332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_89580636_89581005_89581141_89585549
transcript_79562.nic	chr2	-	911	2	ISM	ENSG00000283196.2	ENST00000637196.1	774	3	-61	18245	-5	220	5prime_fragment	FALSE	canonical	3	102	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTAGCCGAGCGTA	NA	False	NA	NA	False	AATACA	-9	NA	89585657	89580337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_89581141_89585549
transcript_79563.nnic	chr2	+	845	3	Fusion	ENSG00000211633.3_ENSG00000242580.1	novel	532	2	NA	NA	-6	388	multi-exon	FALSE	canonical	1	3	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAATTTCATGTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	90190186	90210917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_90190268_90210028_90210109_90210233
transcript_79565.known	chr2	-	582	4	FSM	ENSG00000143429.11	ENST00000608531.1	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	43.058100283222	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGTTCCAGTCCCCCT	85	False	NA	NA	False	AAGAAA	-39	NA	91659922	91642998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_91643354_91654919_91654998_91655367_91655503_91659908
transcript_79570.nic	chr2	-	664	4	NIC	ENSG00000143429.11	novel	761	4	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	41.3037528561268	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTTCTGACTGAATGC	NA	False	NA	NA	False	AATAAA	-16	NA	91660013	91636687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_91637034_91654919_91654998_91655367_91655503_91659908
transcript_79576.known	chr2	-	1194	3	FSM	ENSG00000143429.11	ENST00000609777.6	1214	3	17	3	7	-3	multi-exon	FALSE	canonical	3	20	junction_1	40.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGAGTCAGATCCCG	2	True	NA	NA	False	ATTAAA	-13	NA	91659972	91617159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_91618155_91655367_91655503_91659908
transcript_79578.known	chr2	-	349	3	FSM	ENSG00000143429.11	ENST00000608501.5	349	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGGAGGTCAGGATGTG	78	False	NA	NA	False	NA	NA	NA	91659929	91628760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_91628954_91655367_91655503_91659908
transcript_79584.nic	chr2	-	544	3	ISM	ENSG00000143429.11	ENST00000608531.1	582	4	-91	11695	-24	-11695	5prime_fragment	FALSE	canonical	3	20	junction_1	40.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCGAGCGTAGGGGCAC	NA	False	NA	NA	False	AATACA	-15	NA	91660013	91654693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_91654998_91655367_91655503_91659908
transcript_79586.nic	chr2	-	911	2	ISM	ENSG00000143429.11	ENST00000689711.1	567	3	-24	18014	-24	-11698	5prime_fragment	FALSE	canonical	3	101	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGCCGAGCGTAGGGG	NA	False	NA	NA	False	AATACA	-12	NA	91660013	91654696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_91655503_91659908
transcript_79587.known	chr2	-	435	3	FSM	ENSG00000143429.11	ENST00000608018.5	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTTCTGACTGAATGC	4629	False	NA	NA	False	AATAAA	-16	NA	91655378	91636687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_91637034_91654919_91654998_91655367
transcript_79589.known	chr2	-	3298	12	FSM	ENSG00000144029.12	ENST00000272418.7	3298	12	0	0	0	0	multi-exon	TRUE	canonical	3	502	junction_5	73.6059420885556	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTACTTACTATCTG	0	True	NA	NA	False	AATAAA	-33	NA	95121808	95085368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_79595.known	chr2	-	1359	11	FSM	ENSG00000144029.12	ENST00000345084.9	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	178.646046695694	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	9	True	NA	-19	True	AATAAA	-15	NA	95121799	95087207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_7960.nnic	chr1	-	1061	2	Antisense	novelGene_ENSG00000228665.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	39399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTTTTCTACCATCA	NA	False	NA	NA	False	NA	NA	NA	109030385	108992252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_108992911_109029982
transcript_79601.known	chr2	-	1672	7	FSM	ENSG00000144029.12	ENST00000475895.5	1672	7	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_2	56.9192898370628	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTCGTTGTACTGGTT	-5	True	NA	NA	False	CATAAA	-8	NA	95121813	95103752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_79604.nic	chr2	-	552	4	ISM	ENSG00000144029.12	ENST00000475895.5	1672	7	-171	6207	-171	5162	5prime_fragment	FALSE	canonical	3	633	junction_2	10.2089285540757	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGAAAGGATCTGA	-3	True	NA	NA	False	AAAAAG	-23	NA	95121984	95109959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_95110042_95115065_95115204_95117864_95117946_95121733
transcript_79608.known	chr2	+	3580	5	FSM	ENSG00000275111.5	ENST00000614034.5	3580	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3.35410196624968	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTGATGACTGTCC	4	True	NA	5	True	AATAAA	-17	NA	95165808	95184317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95165861_95176187_95176260_95177482_95177610_95180158_95180273_95181102
transcript_7961.known	chr1	+	555	1	FSM	ENSG00000244716.3	ENST00000414070.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9719	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	9561	False	NA	NA	False	AAGAAA	-34	NA	108992281	108992836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108992300_108992800
transcript_79612.nic	chr2	+	943	2	ISM	ENSG00000233757.6	ENST00000425953.5	1850	5	-21	6334	-21	-6334	5prime_fragment	FALSE	canonical	3	19	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAAATGATGAGGGAGT	-15	True	NA	NA	False	AATAAA	-8	NA	95207513	95209269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_95207835_95208647
transcript_79615.known	chr2	+	1366	9	FSM	ENSG00000115042.10	ENST00000447036.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	113.504336370907	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-7	True	NA	-23	True	NA	NA	NA	95402722	95413096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95402873_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_79618.known	chr2	+	4775	8	FSM	ENSG00000115042.10	ENST00000233379.9	4775	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	82.102723114749	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTCTGGCTTGCTGT	-22	True	NA	20	True	AATAAA	-30	NA	95402707	95416616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95402873_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_79624.nic	chr2	+	1389	8	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	114.432584199303	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-36	True	NA	-23	True	NA	NA	NA	95402693	95413096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_95402993_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_79633.nnic	chr2	+	1018	7	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	122.51938622112	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	-36	True	NA	-23	True	NA	NA	NA	95402693	95413096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_95402873_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_79644.nnic	chr2	+	816	6	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	120.448163124225	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	NA	False	NA	-23	True	NA	NA	NA	95402678	95413096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_95402873_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_79658.nnic	chr2	+	653	5	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_1	161.327307049985	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	NA	False	NA	-23	True	NA	NA	NA	95402678	95413096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_95402873_95410526_95410587_95412433_95412543_95412676_95412765_95412894
transcript_79671.nnic	chr2	+	598	4	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	173.812159145057	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	NA	False	NA	-23	True	NA	NA	NA	95402673	95413096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_95402873_95412433_95412543_95412676_95412765_95412894
transcript_79692.known	chr2	+	522	2	FSM	ENSG00000115042.10	ENST00000445649.1	522	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTAAGTGGGCAGCAT	-9	True	NA	NA	False	NA	NA	NA	95402720	95405802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95402993_95405552
transcript_79693.known	chr2	-	2351	2	FSM	ENSG00000232931.6	ENST00000448494.1	2351	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCATGTTCTAATCATTG	NA	False	NA	NA	False	AATATA	-15	NA	95816215	95807117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_95807303_95814049
transcript_79707.nnic	chr2	+	1258	7	FSM	ENSG00000231584.9	ENST00000685912.1	1242	7	-21	5	0	0	multi-exon	FALSE	canonical	3	11	junction_2	24.3036348447442	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	-16	True	NA	6	True	AGTAAA	-19	NA	96010542	96023380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019275_96019480_96019701_96021124_96021234_96021367_96021466_96022673_96022754_96022893
transcript_7971.nnic	chr1	-	1440	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-49	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.6913429510899	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	NA	False	NA	-4	True	AATAAA	-32	NA	109076061	109062485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109063053_109064138_109064694_109066134_109066233_109074986_109075066_109075920
transcript_79712.nnic	chr2	+	1822	6	FSM	ENSG00000231584.9	ENST00000691870.1	1824	6	-3	5	-1	0	multi-exon	FALSE	canonical	3	28	junction_1	63.6572069761154	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	-17	True	NA	6	True	AGTAAA	-19	NA	96010541	96023380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_79719.nnic	chr2	+	914	6	FSM	ENSG00000231584.9	ENST00000689101.1	912	6	-2	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	38.7195041290562	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTCTGCTGTTTGT	-16	True	NA	5	True	AATAAA	-21	NA	96010542	96021834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019261_96019480_96019701_96021124_96021234_96021367_96021466_96021597
transcript_79720.nnic	chr2	+	1384	6	FSM	ENSG00000231584.9	ENST00000689599.1	1381	6	-8	5	0	0	multi-exon	FALSE	canonical	1	1	junction_2	26.2937254872717	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	-16	True	NA	6	True	AGTAAA	-19	NA	96010542	96023380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019261_96019480_96019701_96021124_96021234_96021367_96021466_96022673
transcript_79727.nnic	chr2	+	1398	6	FSM	ENSG00000231584.9	ENST00000685578.1	1392	6	-11	5	0	0	multi-exon	FALSE	canonical	3	11	junction_2	23.3786227139239	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	-16	True	NA	6	True	AGTAAA	-19	NA	96010542	96023380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019275_96019480_96019701_96021124_96021234_96021367_96021466_96022673
transcript_7973.nnic	chr1	-	1875	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-49	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.6913429510899	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	NA	False	NA	-4	True	AATAAA	-32	NA	109076061	109062485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109063488_109064138_109064694_109066134_109066233_109074986_109075066_109075920
transcript_79735.nnic	chr2	+	1322	5	FSM	ENSG00000231584.9	ENST00000687200.1	1338	5	10	6	-1	0	multi-exon	FALSE	canonical	2	4	junction_2	23.4134042804544	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	-17	True	NA	6	True	AGTAAA	-19	NA	96010541	96023380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96015108_96015326_96021124_96021234_96021367_96021466_96022673
transcript_79739.nnic	chr2	+	1604	5	FSM	ENSG00000231584.9	ENST00000690531.1	1620	5	11	5	0	0	multi-exon	FALSE	canonical	3	19	junction_1	18.952242611364	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	-16	True	NA	6	True	AGTAAA	-19	NA	96010542	96023380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_79740.known	chr2	+	893	5	FSM	ENSG00000231584.9	ENST00000692942.1	980	5	82	5	1	0	multi-exon	FALSE	canonical	3	11	junction_1	24.0676130931175	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	19	False	NA	6	True	AGTAAA	-19	NA	96010613	96023380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673_96022754_96022893
transcript_79746.known	chr2	+	965	4	FSM	ENSG00000231584.9	ENST00000467292.7	1139	4	25	149	0	-127	multi-exon	FALSE	canonical	3	11	junction_1	22.9540604009158	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGCTCCCCACCGCCTC	-8	True	NA	NA	False	NA	NA	NA	96010550	96023249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673
transcript_79748.known	chr2	+	510	4	FSM	ENSG00000231584.9	ENST00000483000.7	1207	4	44	653	-5	-644	multi-exon	FALSE	canonical	0	0	junction_1	28.1227468233259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGAAGTGAAGGCTCTA	13	False	NA	NA	False	NA	NA	NA	96010607	96022732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010852_96021124_96021234_96021367_96021466_96022673
transcript_79750.nnic	chr2	+	1133	3	FSM	ENSG00000231584.9	ENST00000686623.1	1140	3	0	7	0	2	multi-exon	FALSE	canonical	2	4	junction_2	3.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCAGCTTTCTGCTCAA	-11	True	NA	4	True	AGTAAA	-17	NA	96010547	96023378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96021124_96021368_96022673
transcript_79753.known	chr2	+	1298	8	FSM	ENSG00000231584.9	ENST00000607780.5	1298	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	66.3970739458557	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTCTGCTGTTTGT	-2	True	NA	5	True	AATAAA	-21	NA	96010556	96021834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010723_96013723_96013972_96015108_96015326_96019200_96019261_96019537_96019701_96021124_96021234_96021367_96021466_96021597
transcript_79754.known	chr2	-	2394	9	FSM	ENSG00000188886.4	ENST00000342380.3	2394	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.39194109070751	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCACCTCCTGTGTGC	10011	False	NA	-1	True	AATAAA	-20	NA	96138502	96122817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96124272_96129823_96129979_96130063_96130146_96132539_96132722_96133424_96133543_96133964_96134059_96135350_96135413_96137574_96137701_96138381
transcript_79755.known	chr2	-	1685	4	FSM	ENSG00000158050.5	ENST00000288943.5	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	12.4721912892465	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCAGCATCTGGTCTCA	-1	True	NA	-6	True	AATAAA	-24	NA	96145440	96143168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96144038_96144153_96144374_96144760_96144883_96144966
transcript_79756.nic	chr2	-	2983	8	NIC	ENSG00000084090.14	novel	3377	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_7	673.8293552525	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-3	True	NA	-39	True	AATAAA	-26	NA	96208827	96184858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208538
transcript_79757.known	chr2	-	742	5	FSM	ENSG00000084090.14	ENST00000443962.1	742	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	855.336629637712	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGGCTGCCTGTGGCT	-1	True	NA	NA	False	AAAACA	-25	NA	96208825	96193075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208538
transcript_79762.known	chr2	+	3968	7	FSM	ENSG00000144021.3	ENST00000488633.2	3968	7	0	0	0	0	multi-exon	FALSE	canonical	3	593	junction_5	62.9700104988257	818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACCTGAGTTTCTTAG	-34	True	NA	60	True	AATAAA	-30	NA	96266224	96274173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96268659_96269267_96269356_96271110
transcript_79763.known	chr2	-	7194	45	FSM	ENSG00000144028.15	ENST00000323853.10	7194	45	0	0	0	0	multi-exon	TRUE	canonical	3	592	junction_38	143.400107772243	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCCGACTGTCTTCAA	-4	True	NA	-8	True	AATAAA	-17	NA	96305546	96274337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_79770.nic	chr2	-	1329	5	ISM	ENSG00000144028.15	ENST00000323853.10	7194	45	-25	26095	-25	-15216	5prime_fragment	FALSE	canonical	3	730	junction_2	57.9628113534877	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTTAAAGTACAGT	NA	False	NA	NA	False	AATATA	-39	NA	96305571	96300432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_79772.nic	chr2	-	1807	4	NIC	ENSG00000144028.15	novel	4467	32	NA	NA	-25	-15208	intron_retention	FALSE	canonical	3	730	junction_1	62.1521430755922	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTACAGTGTATACTT	NA	False	NA	NA	False	AATATA	-32	NA	96305571	96300424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_96301717_96303158_96303331_96304704_96304869_96305392
transcript_79775.known	chr2	-	3409	3	FSM	ENSG00000144028.15	ENST00000480242.1	3409	3	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	48	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	9257	False	NA	NA	False	NA	NA	NA	96284874	96281184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96283353_96283534_96283714_96283812
transcript_79776.known	chr2	+	2064	3	FSM	ENSG00000198885.10	ENST00000439118.3	2064	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	-8	True	NA	33	True	ATTAAA	-39	NA	96325316	96328353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96325566_96325746_96325850_96326641
transcript_79777.known	chr2	+	1947	2	FSM	ENSG00000198885.10	ENST00000536814.1	1947	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	6	True	NA	33	True	ATTAAA	-39	NA	96325330	96328353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96325566_96326641
transcript_79779.nic	chr2	+	2759	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_1	40.4136911947691	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	9513	False	NA	-11	True	TATAAA	-23	NA	96335727	96373815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_7978.known	chr1	-	814	4	FSM	ENSG00000197780.11	ENST00000338366.6	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.09901951359278	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCAGGCTGGAGTGCA	-24	True	NA	NA	False	NA	NA	NA	109076003	109064139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109064694_109066134_109066233_109074986_109075066_109075920
transcript_79781.known	chr2	+	6030	18	FSM	ENSG00000121152.10	ENST00000240423.9	6030	18	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	34.9319655120188	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTGCCTTTTTTTTT	-17	True	NA	5	True	AATAAA	-17	NA	96335765	96377091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_79784.nic	chr2	+	1457	11	ISM	ENSG00000121152.10	ENST00000435975.5	1852	14	-73	5860	-38	721	5prime_fragment	FALSE	canonical	3	87	junction_1	49.7414314229094	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTACAAAAAAAGATT	9513	False	NA	NA	False	AAAACA	-5	NA	96335727	96360173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142
transcript_79785.nic	chr2	+	1483	11	ISM	ENSG00000121152.10	ENST00000240423.9	6030	18	-31	16918	-31	721	5prime_fragment	FALSE	canonical	3	116	junction_1	42.4942349031019	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTACAAAAAAAGATT	9520	False	NA	NA	False	AAAACA	-5	NA	96335734	96360173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142
transcript_79789.known	chr2	+	1573	10	FSM	ENSG00000121152.10	ENST00000477409.1	1573	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	69.5812873950716	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTATCCACATGACTTCAC	18	True	NA	NA	False	NA	NA	NA	96335800	96359452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96335849_96341713_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044
transcript_79792.known	chr2	-	440	3	FSM	ENSG00000235480.1	ENST00000425578.1	440	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAAGGAAGTCCCTC	6382	False	NA	NA	False	AATAAA	-21	NA	96532306	96527939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96528184_96529733_96529850_96532226
transcript_79793.known	chr2	+	2181	7	FSM	ENSG00000196843.17	ENST00000357485.8	2181	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	3.85861230093008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCCCTGAGGTGTGTGT	-1	True	NA	19	True	AATAAA	-21	NA	96536751	96552634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_79794.known	chr2	+	2038	6	FSM	ENSG00000196843.17	ENST00000412735.5	2038	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	10.6395488626163	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	-1	True	NA	15	True	AATAAA	-17	NA	96536751	96552630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96536831_96547401_96547518_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_79795.known	chr2	+	876	4	FSM	ENSG00000196843.17	ENST00000470579.5	876	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGGCGGGGCGGGCCCGG	23	False	NA	NA	False	NA	NA	NA	96536742	96550285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752
transcript_79798.known	chr2	-	5156	21	FSM	ENSG00000114982.19	ENST00000431828.6	5156	21	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_19	24.0093731696602	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGCTTCAGCTT	-8	True	NA	-15	True	ATTAAA	-15	NA	96638312	96593171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96636920_96637186_96638282
transcript_79799.known	chr2	-	5253	21	FSM	ENSG00000114982.19	ENST00000354204.10	5253	21	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_19	27.6113654135394	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTGCTTCAGCTTCT	-1	True	NA	-13	True	ATTAAA	-17	NA	96638346	96593169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96595632_96601642_96601777_96602115_96602339_96602752_96602863_96604249_96604381_96604778_96604864_96605319_96605512_96608507_96608665_96608863_96609065_96609498_96609563_96610725_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631544_96636920_96637186_96638282
transcript_7980.known	chr1	-	1076	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	32	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.6913429510899	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	8	True	NA	-4	True	AATAAA	-32	NA	109075971	109062485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109063073_109064432_109064694_109066134_109066233_109074986_109075066_109075920
transcript_79805.nic	chr2	-	871	3	ISM	ENSG00000114982.19	ENST00000444759.5	2717	20	11	35376	7	376	5prime_fragment	FALSE	canonical	3	65	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATGTACATTTGTAAGA	6	False	NA	NA	False	NA	NA	NA	96638367	96630961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_96631483_96636920_96637186_96638282
transcript_79806.known	chr2	-	2020	9	FSM	ENSG00000114988.12	ENST00000377079.8	2020	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	80.7355830783428	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTTGTAGTTACGAT	-6	True	NA	NA	False	NA	NA	NA	96740064	96706339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96713106_96713140_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_79807.known	chr2	-	2410	9	FSM	ENSG00000114988.12	ENST00000434524.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	81.9569246616782	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGTAGCCTAAATGAAA	17	True	NA	-50	True	NA	NA	NA	96740041	96705974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737136_96737218_96737948_96738068_96739853
transcript_79809.known	chr2	-	2398	8	FSM	ENSG00000114988.12	ENST00000264963.9	2398	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	12.2790679696825	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-6	True	NA	-4	True	AATGAA	-28	NA	96740064	96705928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_7981.known	chr1	+	2769	3	FSM	ENSG00000215717.7	ENST00000338272.9	2769	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	15.5	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCAATTTATTTGT	0	True	NA	16	True	AATAAA	-17	NA	109090763	109096934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109090883_109092889_109093022_109094416
transcript_79811.known	chr2	-	1163	7	FSM	ENSG00000114988.12	ENST00000434865.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	70.2869120107008	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAATGCTGCTGTGATGTG	-5	True	NA	NA	False	NA	NA	NA	96740063	96707043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96739853
transcript_79812.nic	chr2	-	2326	7	NIC	ENSG00000114988.12	novel	2398	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	69.984323641481	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-17	True	NA	-4	True	AATGAA	-28	NA	96740075	96705928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96737948_96738068_96739853
transcript_79813.known	chr2	-	1008	6	FSM	ENSG00000114988.12	ENST00000440610.5	1008	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	93.1892697685737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGGGACCCCGCATTCC	-6	True	NA	NA	False	NA	NA	NA	96740064	96707116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96739853
transcript_79829.known	chr2	-	892	4	FSM	ENSG00000213337.9	ENST00000393537.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_3	38.1430057663117	1222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTATGTAAGTATTAG	2	True	NA	-7	True	ATTAAA	-19	NA	96858016	96847989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96848445_96853400_96853605_96854337_96854442_96857887
transcript_7983.nnic	chr1	+	438	3	NNC	ENSG00000215717.7	novel	2769	3	NA	NA	-24	-2	at_least_one_novel_splicesite	TRUE	canonical	2	6	junction_2	62	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTTTGTCAATTTATTT	-24	True	NA	14	True	AATAAA	-15	NA	109090739	109096932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_109090883_109092889_109093022_109096769
transcript_79833.nnic	chr2	-	1119	6	NNC	ENSG00000168754.15	novel	2698	17	NA	NA	-9062	0	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_5	2.65329983228432	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGTTTAGAACACTTC	5758	False	NA	-3	True	ATTAAA	-15	NA	96907195	96875884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_96876309_96877889_96878043_96878415_96878494_96893925_96894052_96902619_96902708_96906945
transcript_7984.known	chr1	+	964	2	FSM	ENSG00000215717.7	ENST00000473828.1	964	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGACAAAATATAAAC	42	False	NA	NA	False	NA	NA	NA	109090805	109093776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109090883_109092889
transcript_79844.known	chr2	-	1431	9	FSM	ENSG00000144199.12	ENST00000414820.6	1431	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_8	62.3533278983568	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094882	97083582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97091862_97091989_97094700
transcript_79853.known	chr2	-	1305	8	FSM	ENSG00000144199.12	ENST00000272610.3	1305	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	81.587564078387	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	NA	False	NA	-2	True	AATAAA	-21	NA	97094882	97083582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97094700
transcript_7986.nnic	chr1	+	2653	2	NIC	ENSG00000215717.7	novel	2769	3	NA	NA	-20	-4	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTCTTTGTCAATTTAT	-20	True	NA	12	True	AATAAA	-13	NA	109090743	109096930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_109090883_109094416
transcript_79866.known	chr2	-	956	3	FSM	ENSG00000144199.12	ENST00000483657.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	92	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAGACTCCATCAGGAG	4	False	NA	NA	False	NA	NA	NA	97094835	97089755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97090326_97091461_97091713_97094700
transcript_7987.known	chr1	+	6880	22	FSM	ENSG00000116299.17	ENST00000369939.8	6880	22	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	1.91070501407037	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTCTTAAACATGG	-23	True	NA	NA	False	AATAAA	-15	NA	109114114	109206781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109114337_109161893_109162015_109164498_109164692_109171865_109172014_109172487_109172569_109173473_109173580_109173687_109173838_109185044_109185134_109188176_109188355_109189065_109189195_109189591_109189683_109191365_109191472_109191725_109191864_109192610_109192875_109194420_109194595_109197473_109197655_109197978_109198076_109198572_109198675_109199853_109199981_109200058_109200238_109200734_109200901_109202943
transcript_79875.known	chr2	+	6024	75	FSM	ENSG00000135976.21	ENST00000461153.7	6024	75	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	17.9307979050993	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAATCATTGATTTCTG	328	False	NA	NA	False	NA	NA	NA	97113495	97250199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97113937_97118063_97118179_97118343_97118518_97122886_97122994_97124459_97124598_97127066_97127135_97142639_97142669_97142762_97142836_97144517_97144547_97144639_97144713_97146485_97146517_97149294_97149362_97151878_97151940_97152503_97152535_97154674_97154742_97158106_97158168_97158587_97158656_97162098_97162139_97164282_97164312_97164396_97164470_97167576_97167606_97167694_97167768_97179737_97179767_97179860_97179934_97181597_97181627_97181720_97181794_97183458_97183488_97183581_97183655_97185315_97185345_97185437_97185511_97187197_97187227_97187328_97187402_97189086_97189116_97189217_97189291_97190977_97191007_97191108_97191182_97192857_97192887_97192980_97193054_97194725_97194755_97194844_97194918_97196592_97196622_97196715_97196789_97198462_97198492_97198585_97198659_97200333_97200363_97200452_97200526_97202201_97202231_97202320_97202394_97204067_97204097_97204190_97204264_97205939_97205969_97206062_97206136_97207810_97207840_97207933_97208007_97209680_97209710_97209799_97209873_97211545_97211575_97211668_97211742_97213418_97213448_97213541_97213615_97215300_97215330_97215424_97215498_97217176_97217206_97217299_97217373_97219049_97219079_97219173_97219247_97224805_97224880_97233729_97233872_97241265_97241480_97243845_97244030_97245156_97246072_97247475_97247629_97249143_97249215_97249551_97249646_97250143
transcript_79876.known	chr2	+	986	3	FSM	ENSG00000135976.21	ENST00000452478.2	986	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATCAGTGTGAAGTGA	13	False	NA	NA	False	ACTAAA	-10	NA	97113551	97118829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97113937_97118063_97118179_97118343
transcript_79878.known	chr2	+	3870	3	FSM	ENSG00000277701.5	ENST00000656264.1	3870	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGAGTAAATGCATCC	1822	False	NA	NA	False	NA	NA	NA	97281355	97291849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97284786_97284877_97285008_97291539
transcript_7988.known	chr1	-	731	5	FSM	ENSG00000179902.13	ENST00000369949.8	731	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGTGTCTGTTATCC	-14	True	NA	NA	False	ATTAAA	-20	NA	109113857	109105950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109106099_109106534_109106660_109107006_109107123_109107920_109108038_109113632
transcript_79883.known	chr2	-	1169	15	FSM	ENSG00000196912.13	ENST00000419390.2	1169	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	9.08828579961646	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGAGAAATATCTAGGA	457	False	NA	NA	False	AATATA	-15	NA	97589815	97551311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97551362_97551451_97551481_97553167_97553241_97553342_97553372_97555059_97555133_97555225_97555255_97556936_97557010_97557103_97557133_97558798_97558872_97558965_97558995_97560664_97560738_97560831_97560861_97584943_97585118_97585283_97585399_97589524
transcript_79888.known	chr2	-	1347	5	FSM	ENSG00000196912.13	ENST00000488634.2	1347	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	24.5865817062885	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCTCCAGGGCACCTG	NA	False	NA	NA	False	NA	NA	NA	97511609	97492665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97492856_97507035_97507066_97507563_97508066_97509580_97509734_97511137
transcript_79889.nic	chr2	-	1166	3	ISM	ENSG00000196912.13	ENST00000419390.2	1169	15	-156	33202	-94	-33202	5prime_fragment	FALSE	canonical	3	45	junction_1	3	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGTATGTGAAGGT	301	False	NA	NA	False	AATAAA	-22	NA	97589971	97584513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_97585118_97585283_97585399_97589524
transcript_7989.known	chr1	-	485	3	FSM	ENSG00000179902.13	ENST00000462402.5	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGTGTCTGTTATCC	-1	True	NA	NA	False	ATTAAA	-20	NA	109113844	109105950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109106099_109106534_109106660_109113632
transcript_79890.known	chr2	-	1661	21	FSM	ENSG00000196912.13	ENST00000443455.5	1661	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	11.9226674867665	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGATGGAGAAAAAA	9	True	NA	NA	False	AATATA	-9	NA	97589864	97547564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97547609_97547702_97547732_97549418_97549492_97549585_97549615_97551288_97551362_97551451_97551481_97553167_97553241_97553342_97553372_97555059_97555133_97555225_97555255_97556936_97557010_97557103_97557133_97558798_97558872_97558965_97558995_97560664_97560738_97560831_97560861_97578905_97579044_97580461_97580569_97584943_97585118_97585283_97585399_97589524
transcript_79892.known	chr2	+	613	5	FSM	ENSG00000135940.7	ENST00000464949.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2860.55164041833	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGGCTGGTCTTATTT	-4	True	NA	38	True	AGTAAA	-30	NA	97646096	97648191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97646190_97646516_97646667_97647066_97647141_97647343_97647444_97647995
transcript_79893.known	chr2	+	690	4	FSM	ENSG00000135940.7	ENST00000258424.3	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	5484	junction_3	200.893559434399	12317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGGGCGGGCTGAGG	1	True	NA	NA	False	AATAGA	-42	NA	97646061	97648383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97646190_97647066_97647141_97647343_97647444_97647995
transcript_79903.known	chr2	-	2204	11	FSM	ENSG00000115073.8	ENST00000289228.7	2204	11	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_6	15.0083310198036	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	-59	True	NA	-1	True	NA	NA	NA	97664044	97655938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97658644_97658878_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_79906.known	chr2	-	6701	41	FSM	ENSG00000075568.17	ENST00000186436.10	6701	41	0	0	0	0	multi-exon	TRUE	canonical	2	55	junction_29	17.7516020403793	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTGTGGTTTTTT	-9	True	NA	-6	True	AATAAA	-18	NA	97995948	97756335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97757384_97758892_97759054_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
transcript_79909.known	chr2	+	10096	25	FSM	ENSG00000040933.16	ENST00000409851.8	10096	25	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_16	45.3884277652355	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTACTGAGAATGATGAT	-17	True	NA	NA	False	ATTAAA	-14	NA	98444857	98594392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_98445086_98518963_98519026_98519945_98520155_98520686_98520732_98533376_98533496_98535728_98535846_98536128_98536209_98537862_98537975_98538890_98538982_98539527_98539676_98543876_98544008_98545968_98546074_98546585_98546695_98552785_98552970_98554270_98554490_98555552_98555809_98559462_98559496_98563464_98563638_98564639_98564764_98565639_98565767_98566028_98566170_98568570_98568669_98572814_98572928_98576988_98577144_98587475
transcript_79916.known	chr2	-	770	3	FSM	ENSG00000183513.9	ENST00000483527.5	770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAGGATAAAACTTTTTC	-19	True	NA	94	True	NA	NA	NA	98608507	98600352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_98600794_98604107_98604192_98608262
transcript_79923.known	chr2	-	1770	3	FSM	ENSG00000183513.9	ENST00000328709.8	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_2	61	2136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCAATTCAGTGTTTTT	-24	True	NA	NA	False	AATACA	-25	NA	98608512	98599313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_98600794_98604107_98604192_98608306
transcript_79932.known	chr2	+	1133	6	FSM	ENSG00000115446.12	ENST00000357765.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	28.3224292743402	7333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	-16	True	NA	NA	False	AATAAA	-17	NA	98608588	98618515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_7995.known	chr1	+	804	2	FSM	ENSG00000031698.13	ENST00000482384.1	804	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGCTGATTCTATGT	-6	True	NA	NA	False	NA	NA	NA	109213931	109215153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109214129_109214546
transcript_79955.known	chr2	+	1276	6	FSM	ENSG00000115446.12	ENST00000409347.5	1276	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	276.84320472065	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	239	False	NA	NA	False	AATAAA	-17	NA	98608843	98618515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_98609012_98609642_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_79956.known	chr2	+	2172	5	FSM	ENSG00000115446.12	ENST00000409975.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_1	17.5071414000116	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	-26	True	NA	NA	False	AATAAA	-17	NA	98608578	98618515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_79957.known	chr2	+	482	2	FSM	ENSG00000115446.12	ENST00000466492.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGTGTGTTCACTCT	7493	False	NA	NA	False	AATAAA	-14	NA	98616396	98618512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_98616534_98618167
transcript_79958.known	chr2	-	8388	16	FSM	ENSG00000071073.13	ENST00000393487.6	8388	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	3.78887259690209	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTATTTTATTATTA	-30	True	NA	-1	True	AATAAA	-17	NA	98731132	98619105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_98625593_98625722_98625836_98635221_98635289_98636516_98636596_98639807_98640002_98640120_98640229_98643922_98644054_98645427_98645543_98655444_98655521_98656351_98656466_98658217_98658265_98663045_98663180_98675034_98675176_98678303_98678472_98726238_98726568_98731047
transcript_79961.nic	chr2	-	688	2	ISM	ENSG00000071073.13	ENST00000460768.1	426	3	-13	47518	-13	0	5prime_fragment	FALSE	canonical	3	30	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCTTTTTACTAAAC	-4	True	NA	NA	False	AATAAA	-17	NA	98731106	98725938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_98726568_98731047
transcript_79969.nic	chr2	-	1231	8	ISM	ENSG00000135951.16	ENST00000355053.8	3037	20	-126	107456	-126	4061	5prime_fragment	FALSE	canonical	1	2	junction_4	4.83608882280307	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	NA	False	NA	NA	False	NA	NA	NA	99141698	99105341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109513_99110849_99110916_99117543_99117760_99127047_99127177_99141427
transcript_7997.known	chr1	+	1914	11	FSM	ENSG00000031698.13	ENST00000234677.7	1914	11	0	0	0	0	multi-exon	FALSE	canonical	3	962	junction_5	63.9021908857591	5491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACTTCTGCTTTTCCT	-20	True	NA	9	True	NA	NA	NA	109213917	109238182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109237243_109237374_109237730
transcript_79970.nic	chr2	-	1131	8	ISM	ENSG00000135951.16	ENST00000674128.1	3160	17	-14	107894	-14	4061	5prime_fragment	FALSE	canonical	2	4	junction_4	4.38922614163921	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	354	False	NA	NA	False	NA	NA	NA	99141194	99105341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141067
transcript_79971.nic	chr2	-	1107	8	NIC	ENSG00000135951.16	novel	3160	17	NA	NA	-5	4061	combination_of_known_junctions	TRUE	canonical	2	4	junction_4	4.38922614163921	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	-6	True	NA	NA	False	NA	NA	NA	99141185	99105341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141082
transcript_79972.nic	chr2	-	1275	8	NIC	ENSG00000135951.16	novel	2390	17	NA	NA	-126	4061	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	4.43087497693452	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	NA	False	NA	NA	False	NA	NA	NA	99141698	99105341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141427
transcript_79974.nic	chr2	-	1254	8	NIC	ENSG00000135951.16	novel	3903	21	NA	NA	0	4061	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	5.19418827505653	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	-1	True	NA	NA	False	NA	NA	NA	99154942	99105341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99154692
transcript_7998.known	chr1	+	1882	12	FSM	ENSG00000031698.13	ENST00000369923.4	1882	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	387.996677160518	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTTGAACCCCGCCTCT	44	False	NA	-25	True	AATAAA	-45	NA	109213981	109238148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109236804_109236871_109237243_109237374_109237730
transcript_79987.nic	chr2	-	1957	3	ISM	ENSG00000135951.16	ENST00000489926.6	588	5	-36	6632	-5	1093	5prime_fragment	FALSE	canonical	2	9	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATTGAAGTCACTGTTA	-6	True	NA	NA	False	AATAAA	-23	NA	99141185	99116034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_99117760_99127047_99127177_99141082
transcript_79992.known	chr2	-	390	3	FSM	ENSG00000135951.16	ENST00000489348.1	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTCTCTTTTTCTT	80	False	NA	-1	True	AATAAA	-15	NA	99154861	99148264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99148349_99154290_99154428_99154692
transcript_79993.known	chr2	-	255	3	FSM	ENSG00000135951.16	ENST00000483914.5	255	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	72	False	NA	0	True	AATAAA	-16	NA	99154869	99148263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99148349_99154290_99154428_99154836
transcript_79994.known	chr2	-	2492	2	FSM	ENSG00000135951.16	ENST00000464459.1	2492	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAGAAAAAAATTAGC	1	True	NA	NA	False	NA	NA	NA	99141149	99124766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99127177_99141067
transcript_79996.known	chr2	-	283	2	FSM	ENSG00000135951.16	ENST00000465216.1	283	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	2	True	NA	0	True	AATAAA	-16	NA	99154890	99148263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99148349_99154692
transcript_8.known	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	850	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00022_+_0_700
transcript_80000.known	chr2	+	1058	5	FSM	ENSG00000273045.7	ENST00000409684.2	1058	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	15.1079449297381	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATTTCTCTGGTATTA	28	False	NA	NA	False	AAAAAG	-16	NA	99141749	99151047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99141938_99142284_99142402_99147026_99147123_99147401_99147494_99150482
transcript_80004.known	chr2	+	1627	4	FSM	ENSG00000273045.7	ENST00000650052.2	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.05480466765633	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATTTTAAATCGTGC	-15	True	NA	30	True	AATAAA	-38	NA	99141706	99151669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99141938_99142284_99142402_99147401_99147494_99150482
transcript_80023.known	chr2	+	669	6	FSM	ENSG00000273155.1	ENST00000410042.1	669	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	225.883686883316	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTTTTTTTTTA	0	True	NA	7	True	ACTAAA	-2	NA	99154997	99195298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155052_99156300_99156427_99186176_99186255_99188176_99188258_99194750_99194898_99195115
transcript_80024.known	chr2	+	4435	6	FSM	ENSG00000185414.20	ENST00000338148.8	4435	6	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	35.9699874895725	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTTTTCCGTATTACC	-15	True	NA	24	True	AATAAA	-20	NA	99181183	99199561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572
transcript_8004.known	chr1	-	1710	8	FSM	ENSG00000134222.16	ENST00000369903.6	1710	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	149.280997874916	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-12	True	NA	-40	True	NA	NA	NA	109283122	109279584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283073
transcript_80042.known	chr2	+	803	4	FSM	ENSG00000144182.17	ENST00000415142.1	803	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.8884444373331	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGATATGGGTAATAT	-3	True	NA	NA	False	TATAAA	-35	NA	99155073	99162275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155369_99155481_99155545_99156300_99156427_99161956
transcript_80044.known	chr2	+	562	4	FSM	ENSG00000185414.20	ENST00000409145.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_1	37.3660570869101	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTTTGTTGTTGTTGT	-13	True	NA	NA	False	NA	NA	NA	99181185	99195089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750
transcript_80047.known	chr2	+	1424	3	FSM	ENSG00000144182.17	ENST00000393473.6	1424	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTCTCTTTTAGTAACG	NA	False	NA	41	True	AATAAA	-37	NA	99154954	99163157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155052_99156300_99156427_99161956
transcript_80049.known	chr2	+	885	3	FSM	ENSG00000144182.17	ENST00000434566.5	885	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACACTGTTTCCTGGA	-13	True	NA	NA	False	AATAAA	-9	NA	99154984	99162711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155052_99155481_99155545_99161956
transcript_80056.known	chr2	+	482	2	FSM	ENSG00000144182.17	ENST00000449211.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGCTGTCCAACCC	-21	True	NA	NA	False	AAAAAG	-38	NA	99154976	99162363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155052_99161956
transcript_80057.known	chr2	+	583	2	FSM	ENSG00000144182.17	ENST00000436234.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTATCAAAATCTGGCT	4	True	NA	NA	False	AGTAAA	-33	NA	99155080	99162075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155545_99161956
transcript_80058.known	chr2	-	939	7	FSM	ENSG00000158411.11	ENST00000289359.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_4	39.7090110120556	2554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-20	True	NA	0	True	AATAAA	-19	NA	99181058	99169262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
transcript_80059.known	chr2	-	662	6	FSM	ENSG00000158411.11	ENST00000409107.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	107.334989635254	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATTTAAGACCATGTC	-12	True	NA	-9	True	NA	NA	NA	99181050	99169444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171509_99171647_99173914_99174017_99180830
transcript_80060.known	chr2	-	1083	7	FSM	ENSG00000158411.11	ENST00000413710.2	1083	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	157.234873852958	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	4	True	NA	0	True	AATAAA	-19	NA	99181034	99169262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173413_99173503_99173914_99174017_99180830
transcript_80061.known	chr2	-	714	2	FSM	ENSG00000158411.11	ENST00000483721.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTATGGATCCATCATT	NA	False	NA	-3	True	AATAAA	-16	NA	99170905	99169265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99169611_99170536
transcript_80062.known	chr2	+	1752	5	FSM	ENSG00000185414.20	ENST00000465432.1	1752	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	239.100920115335	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGATCCCATTAATAA	12	True	NA	-11	True	NA	NA	NA	99181210	99197399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99181250_99194750_99194898_99195115_99195190_99195572_99196023_99196357
transcript_80063.known	chr2	+	1497	6	FSM	ENSG00000185414.20	ENST00000409841.1	1497	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	189.19133172532	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAAGGCAACTGCAGTT	4977	False	NA	13	True	AATAAA	-4	NA	99186175	99197423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195824_99196558
transcript_80084.known	chr2	-	1508	5	FSM	ENSG00000115514.12	ENST00000264255.8	1508	5	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	81.8882622846522	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAGAAAGTCAA	0	True	NA	32	True	CATAAA	-20	NA	99336333	99318981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99319800_99321954_99322210_99327534_99327654_99333021_99333243_99336238
transcript_80085.known	chr2	-	1111	4	FSM	ENSG00000115514.12	ENST00000409434.5	1111	4	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_2	47.3732226286351	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTTTAAAATACTAG	0	True	NA	-3	True	AATAAA	-28	NA	99336333	99321533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99322210_99327534_99327654_99333021_99333243_99336238
transcript_80086.known	chr2	+	5741	24	FSM	ENSG00000158417.11	ENST00000289371.11	5741	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	174.055072439633	6359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCCACCGATTGCTGC	-9	True	NA	NA	False	AATAAA	-21	NA	99337388	99401326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270_99364422_99368492_99368592_99369391_99369482_99371655_99371731_99376346_99376637_99379018_99379127_99379317_99379429_99382158_99382227_99382779_99382922_99389717_99389850_99390218_99390402_99390543_99390706_99392966_99393099_99394266_99394399_99394508_99394586_99394718_99394884_99396759_99396899_99398747_99398910_99399306
transcript_80087.known	chr2	-	599	2	FSM	ENSG00000115514.12	ENST00000465183.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGGAGGGCTAGGGAG	-23	True	NA	NA	False	AAGAAA	-42	NA	99336356	99332761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99333243_99336238
transcript_80090.known	chr2	-	1338	7	FSM	ENSG00000115526.11	ENST00000409701.5	1338	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	82.8601566228037	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATAAGACCTATGAATTC	635	False	NA	NA	False	NA	NA	NA	100417011	100393244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100416847
transcript_80091.nic	chr2	-	2678	7	NIC	ENSG00000115526.11	novel	2854	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	77.9460283358513	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	270	False	NA	-4	True	AATAAA	-20	NA	100417376	100391859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417257
transcript_80092.known	chr2	-	2854	7	FSM	ENSG00000115526.11	ENST00000264249.8	2854	7	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	29.3995464817628	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-22	True	NA	-4	True	AATAAA	-20	NA	100417668	100391859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
transcript_8010.known	chr1	-	1584	8	FSM	ENSG00000134222.16	ENST00000369904.7	1584	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	153.593951836706	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-5	True	NA	-11	True	AATAAA	-27	NA	109283115	109279555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_80103.known	chr2	+	1038	6	FSM	ENSG00000115539.14	ENST00000264254.11	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_5	83.9008939165728	3896	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCATTTATATTT	18	True	NA	26	True	ATTAAA	-26	NA	100562992	100576739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_100563074_100566502_100566630_100568930_100569022_100569577_100569722_100571589_100571799_100576353
transcript_80104.known	chr2	+	3834	4	FSM	ENSG00000170485.17	ENST00000495559.1	3834	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAATTTCCTCTGTCCCTT	NA	False	NA	NA	False	AATAAA	-13	NA	100988309	100996822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_100990447_100990779_100990873_100993346_100993528_100995399
transcript_80105.nnic	chr2	-	561	2	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGGGTGGTCTATGGGT	NA	False	NA	NA	False	AATAAA	-24	NA	101252716	101250578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_101250908_101252484
transcript_80106.nnic	chr2	-	487	2	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGGGTGGTCTATGGG	NA	False	NA	NA	False	AATAAA	-23	NA	101252714	101250579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_101250908_101252555
transcript_8011.known	chr1	-	1730	8	FSM	ENSG00000134222.16	ENST00000409267.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	150.778659238079	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	29	False	NA	-11	True	AATAAA	-27	NA	109283125	109279555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283027
transcript_8012.known	chr1	-	1742	8	FSM	ENSG00000134222.16	ENST00000369909.6	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	109.900882988412	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	-14	True	NA	-12	True	AATAAA	-26	NA	109283168	109279556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_80124.known	chr2	+	1291	5	FSM	ENSG00000071082.11	ENST00000264258.8	1291	5	0	0	0	0	multi-exon	FALSE	canonical	3	7790	junction_4	2551.43057910655	92013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGCATGGTTTGTA	5	True	NA	13	True	ATTAAA	-16	NA	101002288	101007267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101006349
transcript_80128.known	chr2	+	817	5	FSM	ENSG00000071082.11	ENST00000409038.5	817	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5617.78575152168	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTTTCAGTTATCAA	9	True	NA	90	True	AATATA	-7	NA	101002292	101018306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017858
transcript_8013.known	chr1	-	1717	8	FSM	ENSG00000134222.16	ENST00000369907.7	1717	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	118.627181384644	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	7	True	NA	-11	True	AATAAA	-27	NA	109283147	109279555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_80130.known	chr2	+	770	5	FSM	ENSG00000071082.11	ENST00000409650.5	770	5	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	5615.70478101369	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAATATAATGTCATGT	9	True	NA	73	True	NA	NA	NA	101002292	101018289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017888
transcript_80134.known	chr2	+	1110	5	FSM	ENSG00000071082.11	ENST00000409028.8	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	5577.42634980508	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATAAACTTATTT	-1	True	NA	NA	False	AATAAA	-20	NA	101002282	101019728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101018997
transcript_8014.known	chr1	-	1826	7	FSM	ENSG00000134222.16	ENST00000409138.6	1826	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	142.21511483977	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	NA	False	NA	-20	True	AATAAA	-18	NA	109283186	109279564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
transcript_8015.known	chr1	-	839	4	FSM	ENSG00000134222.16	ENST00000459765.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	173.49415616159	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGGTGATGTGGTGA	9	True	NA	NA	False	AATAAA	-19	NA	109283145	109281403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109282061_109282517_109282576_109282679_109282732_109283073
transcript_80153.known	chr2	+	716	4	FSM	ENSG00000071082.11	ENST00000409320.7	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	9956	junction_1	1790.00856608751	2866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	9	True	NA	26	True	AATAAA	-14	NA	101002292	101006418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958
transcript_80164.known	chr2	+	641	3	FSM	ENSG00000071082.11	ENST00000409000.5	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	9956	junction_1	1757	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGGGGTGAGGGTCGC	284	False	NA	NA	False	AATAAA	-21	NA	101002228	101004604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157
transcript_80165.known	chr2	+	825	4	FSM	ENSG00000071082.11	ENST00000409733.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	7790	junction_3	2806.58416347464	99808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTTTTTGTTCTTTTT	9	True	NA	27	True	AATAAA	-15	NA	101002292	101006419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101006349
transcript_80166.known	chr2	+	717	4	FSM	ENSG00000071082.11	ENST00000441435.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6472.95781609064	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGGTACACCATGAATT	185	False	NA	35	True	AATAAA	-28	NA	101002738	101024032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101023624
transcript_80167.known	chr2	+	781	4	FSM	ENSG00000071082.11	ENST00000419276.1	781	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5703.9687547843	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTTCTTTTTAGTT	27	False	NA	31	True	AATAAA	-19	NA	101002310	101006423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004362_101005958
transcript_80168.known	chr2	+	357	3	FSM	ENSG00000071082.11	ENST00000456292.5	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	13470	junction_1	257	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCTCCATCCCATAA	137	False	NA	-15	True	NA	NA	NA	101002690	101006071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002809_101004157_101004284_101005958
transcript_80169.known	chr2	+	2478	2	FSM	ENSG00000272902.2	ENST00000610202.2	2478	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGATGTTTCTTTTCT	NA	False	NA	NA	False	ATTAAA	-14	NA	101151659	101155412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101152760_101154034
transcript_8017.known	chr1	-	6990	20	FSM	ENSG00000134243.12	ENST00000256637.8	6990	20	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_13	66.7819040959558	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACTGAAATGACTAAGCT	-11	True	NA	-12	True	AATAAA	-24	NA	109397918	109309574	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345882_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_80170.known	chr2	-	621	2	FSM	ENSG00000163162.9	ENST00000485752.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAATATTGTGATTTTGA	3839	False	NA	NA	False	AATAAA	-22	NA	101272936	101271218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_101271745_101272841
transcript_80173.nic	chr2	-	1167	7	ISM	ENSG00000196460.14	ENST00000646446.1	1942	15	-117	23883	-117	139	5prime_fragment	FALSE	canonical	2	3	junction_2	2.80871659105879	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCATCTTCTGCAGTGTG	313	False	NA	1	True	AATAAA	-18	NA	101474820	101421243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_101421778_101422361_101422473_101428955_101429020_101450593_101450681_101452384_101452447_101466776_101466901_101474635
transcript_80174.nic	chr2	-	1028	7	ISM	ENSG00000196460.14	ENST00000646446.1	1942	15	-117	24022	-117	0	5prime_fragment	FALSE	canonical	2	3	junction_2	2.80871659105879	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATTTGATTGATACGC	313	False	NA	NA	False	AATAAA	-45	NA	101474820	101421382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_101421778_101422361_101422473_101428955_101429020_101450593_101450681_101452384_101452447_101466776_101466901_101474635
transcript_80183.known	chr2	+	1405	9	FSM	ENSG00000115590.14	ENST00000393414.6	1405	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.484122918275927	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAACTCCGTACGTCTTC	19	True	NA	-2	True	AATAAA	-20	NA	101998994	102028417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101999117_102008514_102008643_102009561_102009827_102015870_102016052_102019637_102019813_102022186_102022250_102024532_102024669_102026110_102026254_102028225
transcript_80184.nnic	chr2	+	1439	9	NNC	ENSG00000115590.14	novel	1106	6	NA	NA	-2078	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.484122918275927	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAACTCCGTACGTCTTC	4394	False	NA	-2	True	AATAAA	-20	NA	102006436	102028417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_102006593_102008514_102008643_102009561_102009827_102015870_102016052_102019637_102019813_102022186_102022250_102024532_102024669_102026110_102026254_102028225
transcript_80190.known	chr2	-	1183	7	FSM	ENSG00000135953.11	ENST00000411991.5	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	33.4995854037363	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACAAGCACAACTCGC	-16	True	NA	NA	False	NA	NA	NA	102736878	102718813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732410_102736645
transcript_80191.known	chr2	-	2440	7	FSM	ENSG00000135953.11	ENST00000437075.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	37.6803072646118	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGAGCCCAGCTTGCTCTG	-16	True	NA	NA	False	NA	NA	NA	102736878	102717570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732023_102732139_102732321_102732393_102736645
transcript_80195.known	chr2	-	5293	6	FSM	ENSG00000135953.11	ENST00000258436.10	5293	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	12.7373466624725	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACTGTCATTTATTC	-26	True	NA	-5	True	AATAAA	-16	NA	102736888	102714629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_80196.nic	chr2	-	1499	6	NIC	ENSG00000135953.11	novel	1183	7	NA	NA	-7	414	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	26.2328038913114	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAAATTTGAGATGGT	-33	True	NA	-22	True	ATTAAA	-31	NA	102736895	102718399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_102719208_102723699_102723879_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_802.known	chr1	+	1748	3	FSM	ENSG00000224870.8	ENST00000448629.7	1759	3	1	10	1	0	multi-exon	FALSE	canonical	3	71	junction_1	44.5	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAATTACTCTGTCTCT	-4	True	NA	9	True	TATAAA	-10	NA	1399519	1402036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1399690_1400157_1400304_1400604
transcript_80201.nic	chr2	-	861	3	ISM	ENSG00000135953.11	ENST00000258436.10	5293	6	-7	15916	-7	1740	5prime_fragment	FALSE	canonical	3	82	junction_2	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATTACCAATTTTATTA	-33	True	NA	NA	False	NA	NA	NA	102736895	102730545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_102731069_102732321_102732410_102736645
transcript_80202.known	chr2	-	347	2	FSM	ENSG00000135953.11	ENST00000496253.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTCATTTTTT	NA	False	NA	1	True	ATTAAA	-16	NA	102718334	102715839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_102716042_102718189
transcript_80208.nnic	chr2	+	721	6	NNC	ENSG00000170417.16	novel	1025	5	NA	NA	0	-32979	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.7733953225043	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTAAGTACAATTCATT	NA	False	NA	NA	False	TATAAA	-15	NA	102736904	102986919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102965653_102965734_102986724
transcript_80209.known	chr2	+	3198	6	FSM	ENSG00000170417.16	ENST00000409173.5	3198	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	12.6585939187573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCTCCATATTGTATT	-14	True	NA	NA	False	AATAAA	-40	NA	102736910	102817420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102758388_102758474_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_80214.known	chr2	+	3112	5	FSM	ENSG00000170417.16	ENST00000409528.5	3112	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	7.49583217528247	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCATCTCTCCATATTG	NA	False	NA	NA	False	AATAAA	-36	NA	102736907	102817416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_80219.nic	chr2	+	873	5	NIC	ENSG00000170417.16	novel	1025	5	NA	NA	0	-55	combination_of_known_junctions	TRUE	canonical	2	9	junction_4	10.3198837202751	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGTTTTTCCAAAAAT	NA	False	NA	NA	False	ATTAAA	-18	NA	102736904	102843838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102843411
transcript_80221.nnic	chr2	+	1561	5	NNC	ENSG00000170417.16	novel	1025	5	NA	NA	0	17087	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	12.8160056179763	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACAATCAAATTAAACCCAA	NA	False	NA	NA	False	TTTAAA	-44	NA	102736904	102860980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102859865
transcript_80223.known	chr2	+	1025	5	FSM	ENSG00000170417.16	ENST00000639249.1	1025	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.0779082253011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGATGGTTTTTCTTT	NA	False	NA	NA	False	AATAAA	-23	NA	102736904	102933463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102932884
transcript_80228.known	chr2	+	670	4	FSM	ENSG00000170417.16	ENST00000469971.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	13.29995822884	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGAAGTTCTGGCCAG	7	True	NA	NA	False	NA	NA	NA	102736931	102775518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102775129
transcript_80232.known	chr2	+	624	4	FSM	ENSG00000170417.16	ENST00000488134.5	624	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.1730755689881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCTTCAGTAAGAAG	21	False	NA	NA	False	NA	NA	NA	102736945	102815104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102814747
transcript_80235.known	chr2	+	1472	2	FSM	ENSG00000228528.2	ENST00000666357.1	1472	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCTGTCTGCCATGA	NA	False	NA	NA	False	NA	NA	NA	104703238	104705753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_104703808_104704850
transcript_80237.known	chr2	-	607	4	FSM	ENSG00000233639.8	ENST00000447876.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTATTTGTTTCTGTAT	28	True	NA	NA	False	AATAAA	-20	NA	104853183	104807572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_104807844_104812432_104812619_104812708_104812785_104853109
transcript_80238.known	chr2	-	642	3	FSM	ENSG00000224509.3	ENST00000456519.2	642	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTACGCATATGCT	NA	False	NA	NA	False	AATAAA	-14	NA	105038496	104936240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_104936766_104945003_104945078_105038453
transcript_80240.nnic	chr2	-	1967	2	NNC	ENSG00000224509.3	novel	970	3	NA	NA	-87	-100072	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACAGAGTTCGACTCTT	NA	False	NA	NA	False	AATAAA	-14	NA	105038583	105036361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_105038199_105038453
transcript_80247.known	chr2	-	732	5	FSM	ENSG00000231851.6	ENST00000661548.1	732	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTATACTTTTCATAC	NA	False	NA	NA	False	CATAAA	-18	NA	105103036	105097051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105097399_105098198_105098263_105098601_105098669_105099247_105099301_105102835
transcript_80249.known	chr2	+	1414	11	FSM	ENSG00000135972.9	ENST00000258455.8	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_8	95.2286196476669	16105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCGCTTTATTTTTTT	-2	True	NA	20	True	AATAAA	-26	NA	105038068	105099960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105038228_105049170_105049351_105071312_105071376_105071458_105071490_105079982_105080063_105088983_105089070_105089919_105089996_105092400_105092570_105093529_105093639_105097154_105097325_105099669
transcript_80250.known	chr2	+	797	2	FSM	ENSG00000226508.1	ENST00000436841.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTTTTCAAAATTGTCT	17	False	NA	NA	False	NA	NA	NA	105144112	105145222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105144176_105144488
transcript_80260.nnic	chr2	-	3437	2	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	-15	63	multi-exon	FALSE	canonical	3	11	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGTATCAAAAATATACT	-7	True	NA	63	True	TATAAA	-25	NA	105337490	105333963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_105335069_105335158
transcript_80261.nnic	chr2	-	1304	2	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	-68	-7	multi-exon	FALSE	canonical	2	4	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGATTCTTGTTGATA	NA	False	NA	-7	True	AATATA	-15	NA	105337543	105334033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_105335069_105337274
transcript_80269.nnic	chr2	+	992	6	NNC	ENSG00000135974.10	novel	854	5	NA	NA	-22	362	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_5	121.728550471941	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	NA	False	NA	NA	False	AATAAA	-16	NA	105337509	105349573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314_105345390_105349250
transcript_80273.known	chr2	+	854	5	FSM	ENSG00000135974.10	ENST00000410049.1	854	5	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_3	105.134140506307	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGCTTAGTATAT	-19	True	NA	79	True	TTTAAA	-43	NA	105337531	105345596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314
transcript_80279.nnic	chr2	+	1118	5	NNC	ENSG00000135974.10	novel	4587	4	NA	NA	-22	362	intron_retention	FALSE	canonical	3	17	junction_4	110.709078218545	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	NA	False	NA	NA	False	AATAAA	-16	NA	105337509	105349573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314_105345390_105349250
transcript_8028.nnic	chr1	-	941	9	NNC	ENSG00000143106.13	novel	1667	9	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	113	junction_8	710.238296278087	2696	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTAATAGACTGTTCTC	NA	False	NA	-13	True	AATAAA	-16	NA	109426500	109401849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426419
transcript_80282.known	chr2	+	4587	4	FSM	ENSG00000135974.10	ENST00000258457.7	4587	4	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	17.2497987105808	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTAACTTTCTACTTT	-11	True	NA	NA	False	ATTAAA	-15	NA	105337539	105349211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314
transcript_80285.known	chr2	-	1582	7	FSM	ENSG00000115641.19	ENST00000530340.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	47.6471405228058	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-4	True	NA	-14	True	AATAAA	-17	NA	105399051	105360825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
transcript_80286.known	chr2	-	1478	7	FSM	ENSG00000115641.19	ENST00000322142.13	1478	7	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_6	50.8748464371147	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	1278	False	NA	0	True	AATAAA	-31	NA	105399061	105360811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398969
transcript_80287.known	chr2	-	1367	6	FSM	ENSG00000115641.19	ENST00000408995.5	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	37.3127324113365	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGACTTGCAATAAAG	-3	True	NA	-49	True	NA	NA	NA	105399050	105360860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398969
transcript_80288.known	chr2	-	1578	6	FSM	ENSG00000115641.19	ENST00000358129.8	1578	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.8340799106032	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTTGCCAGGCACAGA	1115	False	NA	-16	True	AATAAA	-15	NA	105399224	105360827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105386360_105386541_105396646_105396698_105398841
transcript_80298.known	chr2	-	1531	6	FSM	ENSG00000115641.19	ENST00000393353.7	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	34.6433254754794	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-4	True	NA	-14	True	AATAAA	-17	NA	105399051	105360825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
transcript_80300.known	chr2	+	753	4	FSM	ENSG00000119147.10	ENST00000238044.8	753	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.49443825784929	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAGAATTCATTTGGGT	-9	True	NA	NA	False	AATAAA	-21	NA	106065687	106078155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_106065844_106071843_106071892_106073885_106074044_106077764
transcript_80303.known	chr2	-	1839	15	FSM	ENSG00000115652.15	ENST00000409501.7	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_10	35.7485549872085	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCCAAGGTCTACTT	3	True	NA	NA	False	GATAAA	-42	NA	106194299	106093507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_80307.nnic	chr2	-	1933	14	NIC	ENSG00000115652.15	novel	1839	15	NA	NA	-2	-3	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	100.990186411746	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCATGGACTTCCAGTT	-1	True	NA	-22	True	AATAAA	-14	NA	106194303	106093313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_106094158_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_80312.nnic	chr2	-	1743	10	NNC	ENSG00000115652.15	novel	2053	15	NA	NA	7412	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	129.353950246772	591	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGACTTCCAGTTTTA	7603	False	NA	-19	True	AATAAA	-17	NA	106131374	106093310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106131152
transcript_80313.nnic	chr2	-	1673	10	NNC	ENSG00000115652.15	novel	2053	15	NA	NA	7397	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	131.515196511963	588	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGACTTCCAGTTTTA	7588	False	NA	-19	True	AATAAA	-17	NA	106131389	106093310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106131237
transcript_80319.nic	chr2	-	716	2	ISM	ENSG00000115652.15	ENST00000483426.5	541	6	-4	20255	-2	-7466	5prime_fragment	FALSE	canonical	3	444	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCCTTTAAAAAAATCAGC	-1	True	NA	NA	False	AATAAA	-34	NA	106194303	106165523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_106166084_106194147
transcript_80320.known	chr2	+	373	1	FSM	ENSG00000213295.3	ENST00000444291.1	373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCATTTATCTGAAAT	NA	False	NA	NA	False	NA	NA	NA	106247368	106247741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_106247400_106247700
transcript_80323.known	chr2	+	1359	8	FSM	ENSG00000198203.10	ENST00000437390.6	1359	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.58034844053754	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTGAGTACAAAAGGAT	19	True	NA	9	True	AATAAA	-15	NA	108288914	108308713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300795_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_80324.known	chr2	+	2539	8	FSM	ENSG00000198203.10	ENST00000251481.11	2539	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.45229884959845	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTGTAAAATTTTTGT	-1	True	NA	NA	False	AATAAA	-22	NA	108288894	108309915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300837_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_80326.known	chr2	+	1206	7	FSM	ENSG00000198203.10	ENST00000409880.5	1206	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.59770474137791	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTGAGTACAAAAGGAT	19	True	NA	9	True	AATAAA	-15	NA	108288914	108308713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108304586_108304701_108305171_108305267_108305414_108305596_108308351
transcript_80327.known	chr2	+	2850	7	FSM	ENSG00000198075.10	ENST00000272452.7	2850	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	5.8309518948453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTATTGTCTCTCT	-23	True	NA	17	True	ATTAAA	-21	NA	108377953	108388989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108378507_108381761_108381888_108382384_108382483_108383092_108383220_108383415_108383511_108386191_108386373_108387319
transcript_80328.known	chr2	+	1045	5	FSM	ENSG00000198075.10	ENST00000409309.3	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.39116499156263	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAATAAATCACTAGGTA	-1	True	NA	NA	False	NA	NA	NA	108378184	108387640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108378507_108381761_108381888_108383415_108383511_108386191_108386373_108387319
transcript_80335.nic	chr2	+	3482	7	FSM	ENSG00000135968.22	ENST00000689620.1	4108	7	-454	1080	-454	0	multi-exon	FALSE	canonical	3	142	junction_1	11.5998084275369	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTATGGTTTTGCAGAT	NA	False	NA	17	True	AGTAAA	-21	NA	108448652	108472899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650_108472117_108472826
transcript_80340.known	chr2	+	786	6	FSM	ENSG00000135968.22	ENST00000409821.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	56.0057139941988	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTATACACCAAGAAGAG	23	True	NA	NA	False	NA	NA	NA	108449230	108470062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108449290_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650
transcript_80346.nic	chr2	+	1034	5	FSM	ENSG00000135968.22	ENST00000467566.2	764	5	-668	398	-562	-389	multi-exon	FALSE	canonical	3	142	junction_1	11.6484977572217	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGCAAGAGGTTGAGGTA	NA	False	NA	NA	False	TATAAA	-3	NA	108448544	108469067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979
transcript_80363.known	chr2	-	558	3	FSM	ENSG00000214184.3	ENST00000322353.3	558	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTATTAAAATTTCTCA	NA	False	NA	NA	False	AATAAA	-9	NA	108534196	108507514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_108507622_108511929_108512013_108533828
transcript_80365.known	chr2	+	4461	10	FSM	ENSG00000169756.16	ENST00000544547.5	4461	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	25.9220102863175	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAACCTGTTGTATAT	-4	True	NA	26	True	AATAAA	-15	NA	108534354	108687238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108534595_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_80367.known	chr2	+	1627	10	FSM	ENSG00000169756.16	ENST00000409441.5	1627	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	36.9397240092092	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAAATCTTATACAA	-2	True	NA	NA	False	AAGAAA	-29	NA	108621265	108684448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108621462_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_80372.nic	chr2	+	2029	13	ISM	ENSG00000153201.16	ENST00000283195.11	11708	29	-49	32712	-49	0	5prime_fragment	FALSE	canonical	3	161	junction_8	16.2794604742704	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAGTATTCCTGAACCT	NA	False	NA	NA	False	AATAAA	-6	NA	108719432	108753097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488_108740682_108746710_108746799_108748919_108749130_108751263_108751446_108751527_108751704_108751870_108751995_108752997
transcript_80374.known	chr2	+	11708	29	FSM	ENSG00000153201.16	ENST00000283195.11	11708	29	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_8	101.470388764005	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAAGTGGTACTTTAT	-28	True	NA	33	True	AATAAA	-15	NA	108719481	108785809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488_108740682_108746710_108746799_108748919_108749130_108751263_108751446_108751527_108751704_108751870_108751995_108752997_108753160_108753425_108753564_108753824_108753972_108754904_108755085_108755175_108755260_108758412_108758549_108762100_108762196_108763236_108768389_108771700_108771872_108772488_108772582_108772867_108773047_108775731_108775937_108777129_108777232_108781268_108781430_108782127_108782402_108782527_108782863_108783595
transcript_80376.nic	chr2	+	1149	7	ISM	ENSG00000153201.16	ENST00000283195.11	11708	29	-49	45128	-49	5130	5prime_fragment	FALSE	canonical	3	182	junction_4	14.1823442663365	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCTTCCACTTGTAGG	NA	False	NA	NA	False	NA	NA	NA	108719432	108740681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488
transcript_80382.nic	chr2	+	2351	14	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	41.5855858050066	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	108786736	108876578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_108786916_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_80386.nic	chr2	+	2212	13	NIC	ENSG00000163006.12	novel	2250	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	54.1301800189958	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	108786736	108876578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_108786916_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_804.known	chr1	+	1843	3	FSM	ENSG00000224870.8	ENST00000447725.2	1843	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGATAAACAAAAGTATAA	8	True	NA	-21	True	NA	NA	NA	1399571	1402006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1399690_1399980_1400304_1400604
transcript_80402.known	chr2	+	2250	14	FSM	ENSG00000163006.12	ENST00000412964.6	2250	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_13	38.9607601106853	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-19	True	NA	NA	False	AATAAA	-20	NA	108786756	108876578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_80403.known	chr2	+	2375	15	FSM	ENSG00000163006.12	ENST00000295124.9	2375	15	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_13	20.2338370870506	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	-5	True	NA	NA	False	AATAAA	-20	NA	108786770	108876578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_80405.known	chr2	-	3091	12	FSM	ENSG00000186522.15	ENST00000356688.8	3091	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	168.532312913185	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTAATTTTCCTTTCT	62	False	NA	NA	False	AATAAA	-44	NA	109614143	109542981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109544325_109545459_109545543_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_80407.known	chr2	-	3014	11	FSM	ENSG00000186522.15	ENST00000397712.7	3014	11	0	0	0	0	multi-exon	FALSE	canonical	1	157	junction_2	86.6835624556351	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTGTATACTTTAAAT	-35	True	NA	-36	True	AATAAA	-17	NA	109613966	109542798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_80411.known	chr2	-	2719	10	FSM	ENSG00000186522.15	ENST00000397714.6	2719	10	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_9	139.558651770324	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	4	True	NA	NA	False	AATAAA	-40	NA	109613927	109542985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109613797
transcript_80412.known	chr2	-	1605	10	FSM	ENSG00000186522.15	ENST00000415095.5	1605	10	0	0	0	0	multi-exon	FALSE	canonical	1	157	junction_1	87.7599137940313	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATCACAGTGTGAAAAGG	370	False	NA	NA	False	AATAAA	-3	NA	109613835	109545801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_80422.nic	chr2	-	703	4	ISM	ENSG00000186522.15	ENST00000415095.5	1605	10	-133	39175	-2	743	5prime_fragment	FALSE	canonical	3	388	junction_2	25.3683967872539	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCTTATTAGCACAT	-37	True	NA	NA	False	AATAAA	-15	NA	109613968	109584976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_109585322_109585720_109585839_109593050_109593120_109613797
transcript_80423.nic	chr2	-	580	4	ISM	ENSG00000186522.15	ENST00000415095.5	1605	10	-133	39298	-2	620	5prime_fragment	FALSE	canonical	3	388	junction_2	25.3683967872539	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTTTTCTTATTTCAAG	-37	True	NA	NA	False	AATAAA	-39	NA	109613968	109585099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_109585322_109585720_109585839_109593050_109593120_109613797
transcript_80425.known	chr2	-	566	5	FSM	ENSG00000186522.15	ENST00000425498.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	190.541826116997	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGCAAACTGGAGGAAAT	10	True	NA	NA	False	NA	NA	NA	109613921	109564424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109564535_109565762_109565860_109567814_109567977_109593046_109593120_109613797
transcript_80426.known	chr2	+	4627	1	FSM	ENSG00000198142.5	ENST00000356454.5	4627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTGAATTGTCTAA	13	True	NA	20	True	AATAAA	-16	NA	109614363	109618990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_109614400_109619000
transcript_80427.known	chr2	-	823	2	FSM	ENSG00000282033.1	ENST00000632044.1	823	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTCTCAGGCACTTTT	NA	False	NA	2	True	AATAAA	-16	NA	109760364	109758798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109759557_109760299
transcript_80428.known	chr2	+	7268	23	FSM	ENSG00000015568.13	ENST00000016946.8	7268	23	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	57.6089158905342	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	1	True	NA	NA	False	ATTAAA	-34	NA	109794304	109857705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_109794538_109801782_109801851_109803431_109803544_109803978_109804132_109808173_109808405_109808749_109808896_109813459_109813656_109819695_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109834996_109835092_109835818_109838043_109845102_109845243_109847809_109848012_109855861
transcript_80429.known	chr2	+	3304	20	FSM	ENSG00000015568.13	ENST00000393283.5	3304	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84.9364435680196	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTCCTTGTTTTTTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	109792757	109833019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_109792990_109794164_109794538_109801782_109801851_109803431_109803544_109803978_109804132_109808173_109808405_109808749_109808896_109813459_109813656_109819695_109819784_109821904_109822115_109824221_109824404_109824486_109824663_109824829_109824954_109825875_109826035_109826300_109826439_109826700_109826848_109827791_109827972_109828064_109828149_109831316_109831453_109832850
transcript_80431.known	chr2	-	2522	20	FSM	ENSG00000144061.14	ENST00000445609.7	2522	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	22.02152057468	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGTTAAAGTGATCCA	-14	True	NA	NA	False	AATAAA	-20	NA	110205013	110123347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163136_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_80439.known	chr2	-	2752	20	FSM	ENSG00000144061.14	ENST00000393272.7	2752	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	22.02152057468	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATCCATTTGAGAAAGTT	7472	False	NA	NA	False	AATAAA	-32	NA	110205066	110123335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163133_110164519_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_80442.known	chr2	-	742	4	FSM	ENSG00000144061.14	ENST00000418527.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	13.7679176187089	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGTGTGGTGACTCAT	0	True	NA	NA	False	CATAAA	-25	NA	110204999	110178040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110178548_110179623_110179685_110201420_110201495_110204899
transcript_80444.nic	chr2	-	465	4	NIC	ENSG00000144061.14	novel	486	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	31.6262900483478	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATAATTTTATTTTTT	7491	False	NA	NA	False	AATAAA	-18	NA	110205047	110178753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_110178936_110179623_110179685_110201420_110201495_110204899
transcript_80446.known	chr2	-	357	2	FSM	ENSG00000144061.14	ENST00000422492.1	357	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGGGGAAGTTTCTAAG	NA	False	NA	NA	False	NA	NA	NA	110129259	110125398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110125682_110129185
transcript_80447.known	chr2	-	2246	21	FSM	ENSG00000144061.14	ENST00000417665.5	2246	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	23.4078512469641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTCACTTTACAACTT	4	True	NA	-13	True	AATAAA	-17	NA	110204995	110123707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110124064_110125218_110125324_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163133_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_80448.known	chr2	-	427	2	FSM	ENSG00000175701.11	ENST00000611969.5	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_1	0	3662	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACCCTTTTATTTTTTC	-9	True	NA	-21	True	AATAAA	-14	NA	110212547	110211528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110211623_110212214
transcript_8045.known	chr1	-	3815	9	FSM	ENSG00000143106.13	ENST00000271308.9	3815	9	0	0	0	0	multi-exon	FALSE	canonical	3	1864	junction_8	187.902193640734	8174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTAATGACTTGCA	-16	True	NA	-9	True	ATTAAA	-17	NA	109426448	109399041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426301
transcript_80450.known	chr2	-	7305	23	FSM	ENSG00000183054.12	ENST00000329516.8	7305	23	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_22	57.3380579768968	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	110577222	110513801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110515646_110523495_110523698_110526264_110526405_110533464_110535689_110536415_110536511_110540054_110540191_110543358_110543443_110543535_110543716_110544659_110544807_110545068_110545207_110545472_110545632_110546553_110546678_110546844_110547021_110547103_110547286_110549392_110549603_110551723_110551812_110557851_110558048_110562611_110562758_110563102_110563334_110567375_110567529_110567963_110568076_110569656_110569725_110576952
transcript_80451.known	chr2	+	747	2	FSM	ENSG00000231536.1	ENST00000458252.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTCCTTTTGTTCCCA	NA	False	NA	NA	False	NA	NA	NA	110610915	110612404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_110611196_110611937
transcript_80453.known	chr2	-	3762	25	FSM	ENSG00000169679.15	ENST00000302759.11	3762	25	0	0	0	0	multi-exon	FALSE	canonical	2	632	junction_18	130.627412258428	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTGTTCTTCATTGC	-1	True	NA	-34	True	AATAAA	-17	NA	110678063	110637527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_80454.known	chr2	-	1380	7	FSM	ENSG00000169679.15	ENST00000478175.2	1380	7	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_6	387.928866618038	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTAGTTGTTATAAA	NA	False	NA	-8	True	AATAAA	-19	NA	110642790	110637836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110642448
transcript_80455.known	chr2	-	2501	20	FSM	ENSG00000169679.15	ENST00000466333.5	2501	20	0	0	0	0	multi-exon	FALSE	canonical	2	632	junction_13	113.76719680669	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGAGTTGTCTTTTGT	34	False	NA	NA	False	AATAAA	-24	NA	110678028	110642113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_8046.known	chr1	+	2526	12	FSM	ENSG00000162650.17	ENST00000459635.2	2526	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	28.4070181061996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	3343	False	NA	21	True	AAAAAG	-19	NA	109483904	109492734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492026_109492105_109492585
transcript_80461.nic	chr2	+	2202	18	ISM	ENSG00000153093.20	ENST00000389811.8	2714	19	-72	1104	-38	-983	5prime_fragment	FALSE	canonical	3	74	junction_16	34.965331322092	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTAGTGATTTCTT	NA	False	NA	NA	False	NA	NA	NA	110732500	111093240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110933488_110933643_110963623_110963714_110987107_110987218_110995892_110996005_111031626_111031715_111049217_111049289_111092864
transcript_8047.known	chr1	+	2448	11	FSM	ENSG00000162650.17	ENST00000683729.1	2448	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	12.8844867961436	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	3343	False	NA	21	True	AAAAAG	-19	NA	109483904	109492734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_8048.known	chr1	+	2624	11	FSM	ENSG00000162650.17	ENST00000684449.1	2624	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.609568524284	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAACATAGAAAAGGAAGGA	-1	True	NA	64	True	TATAAA	-5	NA	109483953	109492777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109484081_109486056_109486305_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_80482.nnic	chr2	+	1744	12	NNC	ENSG00000153093.20	novel	2699	18	NA	NA	-38	40583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	48.7989635440673	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCATCTCATTGACTT	NA	False	NA	NA	False	AATAAA	-16	NA	110732500	110928600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110928057
transcript_80486.known	chr2	+	2188	11	FSM	ENSG00000153093.20	ENST00000340561.8	2188	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	46.5076337819933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCTGCTGATAAAT	22	True	NA	11	True	AATAAA	-26	NA	110732633	110888017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110886780
transcript_8049.nnic	chr1	+	1114	3	NNC	ENSG00000174151.15	novel	5077	4	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTATTATTATGTTCTT	NA	False	NA	16	True	ATTAAA	-13	NA	109494057	109500428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_109494288_109494519_109494575_109499599
transcript_80490.nnic	chr2	+	1246	9	NNC	ENSG00000153093.20	novel	2188	11	NA	NA	-38	5997	at_least_one_novel_splicesite	TRUE	canonical	1	7	junction_8	53.2809475797869	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTTCTTATTGTTGGGC	NA	False	NA	NA	False	AATAAA	-20	NA	110732500	110802178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110801848
transcript_80494.nic	chr2	+	2227	8	ISM	ENSG00000153093.20	ENST00000340561.8	2188	11	-133	84982	-38	6854	5prime_fragment	FALSE	canonical	3	125	junction_3	20.9108896540164	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAACTTAAA	NA	False	NA	NA	False	AATAAA	-8	NA	110732500	110803035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651
transcript_8050.nnic	chr1	+	1204	3	NNC	ENSG00000174151.15	novel	5077	4	NA	NA	6	78	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2.5	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGGATCTAAGTCTCAGA	NA	False	NA	106	True	AATAAA	-17	NA	109494057	109500518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_109494288_109494519_109494575_109499599
transcript_80500.nic	chr2	+	1144	2	ISM	ENSG00000153093.20	ENST00000340561.8	2188	11	-133	118780	-38	-24463	5prime_fragment	FALSE	canonical	3	180	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	110732500	110769237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_110732775_110768367
transcript_80501.known	chr2	-	1358	4	FSM	ENSG00000172965.17	ENST00000664999.1	1358	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGCTTTGTTTTGGAC	NA	False	NA	-1	True	AATAAA	-18	NA	111495067	111207775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111208662_111233627_111233740_111344060_111344238_111494884
transcript_80502.known	chr2	-	969	3	FSM	ENSG00000172965.17	ENST00000453478.2	969	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAATTAAATCAAAATGA	NA	False	NA	NA	False	NA	NA	NA	111495097	111343570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111344238_111367486_111367576_111494884
transcript_80503.known	chr2	-	2065	3	FSM	ENSG00000172965.17	ENST00000673964.1	2065	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAAAGCAAGGACTCC	NA	False	NA	NA	False	NA	NA	NA	111495067	111320094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111321800_111344060_111344238_111494884
transcript_80505.known	chr2	-	552	3	FSM	ENSG00000172965.17	ENST00000308604.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGAATTGTTTGCTT	61	False	NA	-10	True	ATTAAA	-13	NA	111494988	111429318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111429621_111477335_111477482_111494884
transcript_80506.known	chr2	-	660	3	FSM	ENSG00000172965.17	ENST00000673840.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATTGTTTGCTTATTAG	34	False	NA	-5	True	ATTAAA	-18	NA	111495015	111429313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111429621_111494556_111494779_111494884
transcript_80508.known	chr2	-	6654	2	FSM	ENSG00000172965.17	ENST00000673654.1	6654	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAACTTTCATCTGAA	5	False	NA	NA	False	AATAAA	-44	NA	111495044	111361081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111367576_111494884
transcript_80509.known	chr2	-	514	2	FSM	ENSG00000172965.17	ENST00000409569.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	NA	False	NA	0	True	ATTAAA	-23	NA	111495086	111429308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111429621_111494884
transcript_8051.nic	chr1	+	587	2	ISM	ENSG00000174151.15	ENST00000369868.7	1085	3	-56	1686	6	-1396	5prime_fragment	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAGGGGCAGAGGACT	NA	False	NA	NA	False	AAAACA	-29	NA	109494057	109494876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_109494288_109494519
transcript_80510.known	chr2	-	419	2	FSM	ENSG00000172965.17	ENST00000674026.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGAATTGTTTGCTT	NA	False	NA	-10	True	ATTAAA	-13	NA	111462731	111429318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111429621_111462614
transcript_80512.known	chr2	-	7762	48	FSM	ENSG00000153107.13	ENST00000341068.8	7762	48	0	0	0	0	multi-exon	TRUE	canonical	3	271	junction_33	76.1552047499217	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGTTTGCACACATAT	-18	True	NA	-3	True	AATAAA	-18	NA	111884193	111767639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111769407_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795_111856887_111858305_111858402_111862388_111862599_111863674_111863896_111864805_111864952_111868022_111868097_111872629_111872713_111873307_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
transcript_80513.known	chr2	-	580	2	FSM	ENSG00000153107.13	ENST00000467878.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGTAGAGTTAAGGTG	-6	True	NA	NA	False	NA	NA	NA	111884181	111880509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111880850_111883941
transcript_80514.known	chr2	+	3826	19	FSM	ENSG00000153208.18	ENST00000295408.9	3826	19	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	7.75492674942123	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTGTGAATGGAAAGAT	-3	True	NA	NA	False	AATAAA	-22	NA	111898606	112029561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_111898797_111929119_111929541_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350
transcript_80516.known	chr2	+	3600	20	FSM	ENSG00000153208.18	ENST00000421804.6	3600	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_19	10.3174005186677	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATATGTTGAACTTACTT	-2	True	NA	10	True	AATAAA	-14	NA	111898607	112029366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_111898797_111929119_111929541_111944959_111945061_111947393_111947568_111965190_111965278_111968136_111968253_111975288_111975473_111982841_111982994_111994250_111994405_111997322_111997477_112001200_112001287_112003091_112003188_112003903_112003985_112008382_112008476_112009947_112010067_112019412_112019523_112021421_112021582_112022257_112022395_112028350_112029294_112029323
transcript_80524.nnic	chr2	-	1775	10	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	21	40	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	31.9111420612663	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	NA	False	NA	-6	True	AATAAA	-32	NA	112255115	112215864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112253969_112254108_112254899
transcript_8053.known	chr1	+	9044	9	FSM	ENSG00000065135.12	ENST00000369851.7	9044	9	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	75.2420053892771	1196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGGCAAAAGAAAGATAAT	8	True	NA	NA	False	AATAAA	-29	NA	109548614	109600195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109548839_109573736_109573780_109573895_109574038_109579203_109579362_109582436_109582566_109586215_109586346_109586728_109586883_109592042_109592256_109592344
transcript_80530.known	chr2	-	1601	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-27	40	at_least_one_novel_splicesite	FALSE	non_canonical	3	69	junction_2	5.59016994374947	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-33	True	NA	-6	True	AATAAA	-32	NA	112255087	112215864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_80539.known	chr2	-	847	7	FSM	ENSG00000144161.14	ENST00000474234.5	847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	37.7874170708834	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTGTAAGTTTTAT	31	True	NA	17	True	AAGAAA	-2	NA	112255023	112233325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112253969_112254100_112254899
transcript_80540.nic	chr2	-	814	6	ISM	ENSG00000144161.14	ENST00000409573.7	5892	9	-86	21797	8	0	5prime_fragment	FALSE	canonical	3	83	junction_2	1.01980390271856	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTGTAAGTTTTAT	NA	False	NA	17	True	AAGAAA	-2	NA	112255128	112233325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_80544.nic	chr2	-	517	3	ISM	ENSG00000144161.14	ENST00000409573.7	5892	9	-86	26786	8	-1729	5prime_fragment	FALSE	canonical	3	84	junction_1	1	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGTCAAACTATTTTA	NA	False	NA	NA	False	AGTAAA	-15	NA	112255128	112238314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_112238529_112250190_112250273_112254907
transcript_80546.known	chr2	-	319	2	FSM	ENSG00000144161.14	ENST00000495264.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGGAAATGGATATGAG	-6	True	NA	NA	False	AAAAAG	-7	NA	112255060	112250106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112250273_112254907
transcript_80547.known	chr2	-	5892	9	FSM	ENSG00000144161.14	ENST00000409573.7	5892	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.3789951422619	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTGTTATGGAGTTT	12	True	NA	-20	True	AATAAA	-15	NA	112255042	112211528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112216469_112230902_112230951_112231837_112231948_112233259_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_80550.known	chr2	+	963	4	FSM	ENSG00000188177.14	ENST00000476511.1	963	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATATCCTCTATTAG	-14	True	NA	NA	False	AATAAA	-19	NA	112299855	112312192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112300030_112303228_112303352_112309884_112310162_112311803
transcript_80554.known	chr2	-	7299	23	FSM	ENSG00000169629.12	ENST00000302558.8	7299	23	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	60.5354380193812	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	NA	False	NA	NA	False	ATTAAA	-34	NA	112433645	112368368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112370213_112378052_112378255_112380823_112380964_112388023_112390248_112390974_112391070_112394617_112394754_112397921_112398006_112398098_112398279_112399222_112399370_112399631_112399770_112400035_112400195_112401116_112401241_112401407_112401584_112401666_112401849_112403965_112404176_112406296_112406385_112412430_112412627_112417192_112417339_112417683_112417915_112421959_112422113_112422547_112422660_112424239_112424308_112433381
transcript_80559.known	chr2	+	7527	15	FSM	ENSG00000125630.16	ENST00000263331.10	7527	15	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_3	39.802830378284	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTGCAAATATTTTCT	8	True	NA	21	True	TATAAA	-16	NA	112542464	112579818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292_112559575_112564365_112564500_112567966_112568138_112568745_112568903_112572561_112572759_112573561_112573816_112574846
transcript_80563.nic	chr2	+	1972	9	ISM	ENSG00000125630.16	ENST00000541869.5	5059	16	133	17542	-20	213	internal_fragment	FALSE	canonical	3	265	junction_3	41.49924698112	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGTGGGTTTTTTTGTGT	262	False	NA	NA	False	GATAAA	-13	NA	112542168	112559608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292
transcript_80567.known	chr2	+	529	4	FSM	ENSG00000125611.16	ENST00000469030.1	529	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	345.902683809575	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-12	True	NA	17	True	AATAAA	-21	NA	112584871	112589040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112584919_112585973_112586115_112586199_112586366_112588865
transcript_8057.known	chr1	+	3728	18	FSM	ENSG00000116337.20	ENST00000342115.8	3728	18	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	20.6241703198961	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	-24	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_80574.known	chr2	+	691	4	FSM	ENSG00000125611.16	ENST00000324913.10	523	4	-168	0	-28	0	multi-exon	FALSE	canonical	3	619	junction_1	55.2509426767242	4171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	-23	True	NA	17	True	AATAAA	-21	NA	112584440	112589040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112584650_112585973_112586115_112586199_112586366_112588865
transcript_80575.known	chr2	+	748	3	FSM	ENSG00000125611.16	ENST00000454841.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_1	52	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	5	True	NA	17	True	AATAAA	-21	NA	112584468	112589040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112584650_112585973_112586366_112588865
transcript_80576.known	chr2	-	359	1	FSM	ENSG00000231747.1	ENST00000443291.1	359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTATTTTAATAAATT	9507	False	NA	-45	True	NA	NA	NA	112622167	112621808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112621800_112622200
transcript_80577.known	chr2	-	2022	5	FSM	ENSG00000237753.2	ENST00000457336.1	2022	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCGTGTCTTAGAGTTA	623	False	NA	-5	True	AATAAA	-15	NA	112645690	112641831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112641983_112642082_112642190_112643178_112643294_112643958_112644016_112644098
transcript_80578.known	chr2	-	1266	7	FSM	ENSG00000237753.2	ENST00000671122.1	1266	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGAAATAAAGTTGTT	593	False	NA	-33	True	NA	NA	NA	112645720	112641859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112641983_112642082_112642190_112643178_112643294_112643958_112644016_112644098_112644246_112644897_112645324_112645429
transcript_8058.known	chr1	+	3899	18	FSM	ENSG00000116337.20	ENST00000256578.8	3899	18	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	39.9882335635048	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	43	False	NA	15	True	AATAAA	-15	NA	109620653	109632051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109621267_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_80580.known	chr2	+	3297	11	FSM	ENSG00000144136.11	ENST00000272542.8	3297	11	0	0	0	0	multi-exon	TRUE	canonical	3	717	junction_6	162.720496557748	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	-1	True	NA	54	True	AATAAA	-23	NA	112645938	112663825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_80584.nnic	chr2	+	1103	2	Antisense	novelGene_ENSG00000169607.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACCACTCTGGATACA	NA	False	NA	NA	False	AATGAA	-45	NA	112764160	112771482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_112764579_112770797
transcript_80586.known	chr2	-	4723	9	FSM	ENSG00000169607.13	ENST00000302450.11	4723	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	2.91279504943276	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGAATTAGAGTTAACT	16	True	NA	-3	True	AATAAA	-19	NA	112764609	112736348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_80587.known	chr2	-	2455	10	FSM	ENSG00000169607.13	ENST00000435431.5	2455	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	16.0677577622446	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTATCTTATTTATTA	8	True	NA	-2	True	ATTAAA	-17	NA	112764617	112737866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112756135_112756892_112757215_112760712_112760765_112762502_112762570_112764561
transcript_80588.known	chr2	-	2017	7	FSM	ENSG00000115008.6	ENST00000263339.4	2017	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.7950549357115	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGACACATAGTTATT	0	True	NA	-13	True	AATAAA	-14	NA	112784493	112773924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112775268_112777986_112778112_112779495_112779667_112781603_112781827_112782715_112782765_112783723_112783779_112784442
transcript_80589.nnic	chr2	+	828	2	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGACCTGGGTCAGATTT	8198	False	NA	NA	False	AATAAA	-14	NA	112850088	112863509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_112850323_112862915
transcript_806.known	chr1	+	515	2	FSM	ENSG00000224870.8	ENST00000570344.1	515	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCGCCTGTTATGGGTAAC	-2	True	NA	NA	False	NA	NA	NA	1399561	1400544	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1399690_1400157
transcript_80604.known	chr2	+	1740	16	FSM	ENSG00000136682.16	ENST00000358604.7	1740	16	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	504.316285237306	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	9	False	NA	NA	False	ATTAAA	-13	NA	113437790	113496119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113439019_113439118_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_80622.nic	chr2	+	721	4	ISM	ENSG00000136682.16	ENST00000358604.7	1740	16	-57	52106	-29	-362	5prime_fragment	FALSE	canonical	3	219	junction_1	639.202280624495	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAAAGTGTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	113437733	113444013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_113438023_113439019_113439118_113441350_113441438_113443766
transcript_80624.known	chr2	+	1827	15	FSM	ENSG00000136682.16	ENST00000259199.9	1827	15	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_6	441.241043153587	4157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTTTGTCAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	113437690	113496204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_80625.known	chr2	+	1665	14	FSM	ENSG00000136682.16	ENST00000416503.6	1665	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	518.530684729378	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	113437762	113496171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_80626.known	chr2	+	1436	16	FSM	ENSG00000136682.16	ENST00000456188.5	1436	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	551.280408584315	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	1	False	NA	NA	False	AATAAA	-18	NA	113437821	113495799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113457064_113457210_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_80627.known	chr2	+	880	3	FSM	ENSG00000136682.16	ENST00000490323.5	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	1290	junction_1	162.5	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTCTAGTGAATTAAA	18	False	NA	NA	False	TATAAA	-26	NA	113437838	113444375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350_113441438_113443766
transcript_80628.known	chr2	+	585	2	FSM	ENSG00000136682.16	ENST00000463627.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	1290	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTTTATTTTATTTT	9	False	NA	NA	False	AATAAA	-39	NA	113437816	113441729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350
transcript_80634.known	chr2	+	1684	10	FSM	ENSG00000146556.15	ENST00000453662.6	1684	10	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_6	95.0730713130111	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	4451	False	NA	NA	False	AATAAA	-12	NA	113588549	113599034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596583_113596670_113596830_113597485_113597639_113598397_113598467_113598606
transcript_8065.known	chr1	+	1166	8	FSM	ENSG00000213366.13	ENST00000241337.9	1166	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	11.647895491794	562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	-19	True	NA	NA	False	AGTAAA	-13	NA	109668056	109675286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109668152_109668424_109668501_109668924_109668990_109669289_109669372_109669470_109669572_109671286_109671383_109671472_109671584_109674746
transcript_80672.known	chr2	-	2078	3	FSM	ENSG00000240356.6	ENST00000416673.6	2078	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	28	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGTTAACTTTAGGCAT	NA	False	NA	NA	False	CATAAA	-6	NA	113627040	113610501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_113612248_113625608_113625730_113626829
transcript_80673.nnic	chr2	-	1168	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-57	216	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	4	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	NA	False	NA	NA	False	AAGAAA	-20	NA	113627147	113611467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113612248_113625608_113625730_113626880
transcript_80681.nnic	chr2	-	952	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_2	4	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	NA	False	NA	NA	False	CATAAA	-45	NA	113627147	113611683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113612248_113625608_113625730_113626880
transcript_80685.nnic	chr2	-	682	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-57	-9947	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	-3	True	ATTAAA	-27	NA	113627147	113621725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622020_113625608_113625730_113626880
transcript_80688.nnic	chr2	-	817	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-57	-9954	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	20.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATCCATGTATTTGT	NA	False	NA	-10	True	ATTAAA	-20	NA	113627147	113621732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622162_113625608_113625730_113626880
transcript_80689.known	chr2	-	738	3	FSM	ENSG00000240356.6	ENST00000391616.3	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	12	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	NA	False	NA	NA	False	CATAAA	-45	NA	113627090	113611683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_113612248_113625608_113625730_113627037
transcript_80691.known	chr2	+	1052	10	FSM	ENSG00000144134.19	ENST00000393166.7	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	62.8898704281471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAGTAAATGTATGTG	35	False	NA	12	True	AGTAAA	-16	NA	113627306	113643391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641355_113641451_113641780_113641865_113642030_113642146_113643189
transcript_80695.known	chr2	+	2141	9	FSM	ENSG00000144134.19	ENST00000683472.1	2141	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	53.3215481770738	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-6	True	NA	13	True	AGTAAA	-17	NA	113627265	113643392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030
transcript_80697.known	chr2	+	1944	8	FSM	ENSG00000144134.19	ENST00000452831.5	1944	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.6627368269823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTAATAGGGTTTTG	11	False	NA	-51	True	NA	NA	NA	113627282	113643328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634156_113634233_113635050_113635131_113641352_113641451_113641780_113641865_113642030
transcript_80699.known	chr2	+	623	8	FSM	ENSG00000144134.19	ENST00000376439.3	623	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_7	62.4058474497252	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAGGAGAGCTAGCAGA	115	False	NA	NA	False	NA	NA	NA	113627386	113643231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030_113642146_113643189
transcript_8070.known	chr1	+	852	8	FSM	ENSG00000134184.13	ENST00000369823.6	852	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.9958320133323	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCGTTCCTTTCTCCT	21	False	NA	NA	False	NA	NA	NA	109687828	109693388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109688990_109689130_109689224_109689326_109690270_109690367_109690453_109690565_109693205
transcript_80701.known	chr2	+	1979	7	FSM	ENSG00000144134.19	ENST00000409842.5	1979	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	57.849421393438	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	1	False	NA	13	True	AGTAAA	-17	NA	113627239	113643392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
transcript_80707.known	chr2	+	2041	8	FSM	ENSG00000144134.19	ENST00000450954.5	2041	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	70.9446464304591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAAGGCTGAATGACA	-8	True	NA	-11	True	NA	NA	NA	113627263	113643368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113641352_113641481_113641780_113641865_113642030
transcript_80709.known	chr2	-	1711	7	FSM	ENSG00000115084.15	ENST00000498768.1	1711	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	9.4809751022186	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTATAAAATTTTTTTAA	0	True	NA	NA	False	AATGAA	-25	NA	113756587	113741908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
transcript_8071.known	chr1	+	1164	8	FSM	ENSG00000134184.13	ENST00000309851.10	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	25.0199920063936	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	9	True	NA	NA	False	AGTAAA	-13	NA	109687816	109693745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109690453_109690565_109693205
transcript_80715.known	chr2	+	6589	12	FSM	ENSG00000115091.12	ENST00000263238.7	6589	12	0	0	0	0	multi-exon	TRUE	canonical	3	1007	junction_6	77.0678567591869	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCCAAATAAATTCCTG	-13	True	NA	NA	False	NA	NA	NA	113890088	113962596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113890324_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_80718.known	chr2	+	1530	12	FSM	ENSG00000115091.12	ENST00000535589.3	1530	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	331.121036021374	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAATAAGTGTATCAC	355	False	NA	NA	False	TTTAAA	-42	NA	113890597	113957591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113890779_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_80725.known	chr2	+	566	4	FSM	ENSG00000115091.12	ENST00000443297.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	514.575769175174	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCAGGCTTGTACATTGC	-39	True	NA	NA	False	AATATA	-30	NA	113890062	113931369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113890324_113916883_113917009_113927344_113927456_113931300
transcript_80726.known	chr2	+	3052	26	FSM	ENSG00000175497.17	ENST00000310323.12	3052	26	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	12.9519728227016	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAGAAATGTGGATTTCA	272	False	NA	56	True	ATTAAA	-14	NA	115162106	115842900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_115162273_115309238_115309354_115343816_115343913_115499509_115499605_115525897_115525973_115689686_115689740_115689839_115689922_115727815_115727937_115739738_115739894_115746085_115746184_115753173_115753298_115762571_115762611_115768296_115768405_115777207_115777300_115777786_115777835_115780873_115780996_115782351_115782400_115791080_115791180_115791286_115791357_115814792_115814988_115815674_115815730_115836156_115836257_115836506_115836566_115836673_115836747_115840749_115840824_115842210
transcript_80730.nic	chr2	+	612	3	ISM	ENSG00000175497.17	ENST00000486885.5	913	5	-44	182235	4	-155418	5prime_fragment	FALSE	canonical	1	5	junction_1	27.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGATATGTGTAGTTA	276	False	NA	NA	False	NA	NA	NA	115162110	115344151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_115162273_115309238_115309354_115343816
transcript_80731.known	chr2	-	2544	4	FSM	ENSG00000235026.7	ENST00000665204.1	2544	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.9652400197707	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATATATGAAAGAATTAT	653	False	NA	NA	False	NA	NA	NA	115161384	115134189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_115136162_115144246_115144369_115144858_115145028_115161103
transcript_80732.known	chr2	-	730	3	FSM	ENSG00000235026.7	ENST00000432658.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGGTGTACACAGCCC	-7	True	NA	-5	True	AATAAA	-15	NA	115161343	115144047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_115144369_115144858_115145028_115161103
transcript_80735.nnic	chr2	-	683	2	Antisense	novelGene_ENSG00000286370.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGCTTGAGGAATTGTAT	NA	False	NA	NA	False	AATAAA	-12	NA	117623750	117501387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_117501555_117623234
transcript_80737.known	chr2	-	4021	3	FSM	ENSG00000238207.2	ENST00000656175.1	4021	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGAAAACTTCCATAAT	NA	False	NA	NA	False	NA	NA	NA	117803899	117754138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_117757775_117760372_117760592_117803733
transcript_80739.nnic	chr2	-	495	2	NIC	ENSG00000238207.2	novel	592	4	NA	NA	-130	-2707	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATTTGTCTTTTCTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	117804304	117760269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_117760592_117804131
transcript_80740.known	chr2	+	3753	14	FSM	ENSG00000088205.13	ENST00000263239.7	3753	14	0	0	0	0	multi-exon	FALSE	canonical	3	813	junction_7	86.6783484768518	4239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCGTTTATGGATGCTT	-22	True	NA	22	True	ATTAAA	-18	NA	117814690	117832377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_117814863_117817443_117817729_117819648_117819793_117821160_117821297_117821649_117821751_117821861_117822062_117822146_117822262_117824568_117824709_117824939_117825102_117825446_117825600_117826268_117826383_117828948_117829006_117829288_117829467_117830581
transcript_80741.known	chr2	-	6833	24	FSM	ENSG00000125633.11	ENST00000376300.7	6833	24	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	14.2835185998298	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGAGACTCTTTCTTGG	-7	True	NA	90	True	GATAAA	-16	NA	118014070	117915480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_80747.known	chr2	-	6896	24	FSM	ENSG00000125633.11	ENST00000319432.9	6896	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	24.3643577417167	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGACTCTTTCTTGGGTC	5	True	NA	93	True	GATAAA	-19	NA	118014133	117915477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978028_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_80748.known	chr2	+	1500	1	FSM	ENSG00000279227.1	ENST00000623784.1	1500	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCCAAATGTGTTGT	NA	False	NA	4	True	AATAAA	-19	NA	118014173	118015673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118014200_118015700
transcript_80753.known	chr2	+	3185	6	FSM	ENSG00000125629.16	ENST00000485520.5	3185	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	82.4984848345714	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	-5	True	NA	4	True	AATAAA	-17	NA	118088473	118110997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088542_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_80757.known	chr2	+	3562	6	FSM	ENSG00000125629.16	ENST00000245787.9	3562	6	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	36.1020775025482	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	-8	True	NA	4	True	AATAAA	-17	NA	118088470	118110997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088542_118096418_118096801_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_80761.known	chr2	+	627	6	FSM	ENSG00000125629.16	ENST00000467223.5	627	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100.782141275129	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACTTCAGACTGTAAAA	6	False	NA	NA	False	NA	NA	NA	118088549	118108390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088667_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_80769.known	chr2	+	574	5	FSM	ENSG00000125629.16	ENST00000411929.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	83.3677845453506	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTAGATATACCAACA	-27	True	NA	NA	False	NA	NA	NA	118088451	118108372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088542_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_80777.nnic	chr2	-	533	3	FSM	ENSG00000226856.8	ENST00000688717.1	554	3	20	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_2	7.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTGATTTCATTTAG	8704	False	NA	-14	True	ATTAAA	-17	NA	118186448	118182936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_118183323_118185337_118185391_118186354
transcript_80778.nnic	chr2	-	426	3	FSM	ENSG00000226856.8	ENST00000688717.1	554	3	24	104	4	-101	multi-exon	FALSE	canonical	0	0	junction_2	7.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTGGTTCACAGATCAT	8708	False	NA	-117	True	ATTAAA	-32	NA	118186444	118183039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_118183323_118185337_118185391_118186354
transcript_80779.nnic	chr2	-	474	3	FSM	ENSG00000226856.8	ENST00000688717.1	554	3	-106	186	-106	-183	multi-exon	FALSE	canonical	0	0	junction_2	7.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGGCACCATCTGTCCC	8578	False	NA	NA	False	ATTAAA	-16	NA	118186574	118183121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_118183323_118185337_118185391_118186354
transcript_80780.known	chr2	-	480	2	FSM	ENSG00000226856.8	ENST00000661786.2	488	2	8	0	8	0	multi-exon	FALSE	canonical	3	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCATTTAGAGGATCAT	8712	False	NA	-6	True	ATTAAA	-25	NA	118186440	118182928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_118183323_118186354
transcript_80781.known	chr2	+	1871	5	FSM	ENSG00000115107.20	ENST00000393107.2	1871	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	6.49519052838329	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTTGTGCTGTGGTGGG	10	True	NA	NA	False	NA	NA	NA	119223852	119263698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119223889_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_80789.known	chr2	-	950	7	FSM	ENSG00000186132.15	ENST00000409877.5	950	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	51.8544972870135	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATTAAGCTCTTTAT	5642	False	NA	NA	False	AAAACA	-24	NA	119366682	119302443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119340158_119340362_119366356
transcript_80790.known	chr2	-	1150	7	FSM	ENSG00000186132.15	ENST00000409466.6	1150	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	51.8544972870135	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	11	True	NA	-6	True	AATAAA	-17	NA	119366742	119302224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119340158_119340362_119366435
transcript_80795.known	chr2	-	747	6	FSM	ENSG00000186132.15	ENST00000409523.1	747	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	45.529770480423	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATTAAGCTCTTTAT	5642	False	NA	NA	False	AAAACA	-24	NA	119366682	119302443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366356
transcript_80796.known	chr2	-	685	6	FSM	ENSG00000186132.15	ENST00000334816.12	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	19.6712988894989	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-7	True	NA	-6	True	AATAAA	-17	NA	119366834	119302224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366789
transcript_80799.nnic	chr2	-	976	5	NIC	ENSG00000186132.15	novel	685	6	NA	NA	-342	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_3	39.6894192449323	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	5148	False	NA	-6	True	AATAAA	-17	NA	119367176	119302224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_119302549_119311621_119311704_119317465_119317504_119339826_119339972_119366789
transcript_808.known	chr1	+	2228	1	FSM	ENSG00000224870.8	ENST00000572242.1	2228	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	473	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCAAATTACTCTGTC	-3	True	NA	6	True	TATAAA	-7	NA	1399805	1402033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1399800_1402000
transcript_80801.known	chr2	+	576	5	FSM	ENSG00000155368.18	ENST00000409094.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2826.38872945672	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTTCCTTGAGTAG	6	True	NA	-9	True	GGGGCT	-9	NA	119366988	119372481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367061_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_80802.known	chr2	+	714	5	FSM	ENSG00000155368.18	ENST00000311521.8	714	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2834.53298622542	2132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGATCTGAGTTCTT	87	False	NA	56	True	ATTAAA	-24	NA	119367069	119372546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367215_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_80803.known	chr2	+	740	5	FSM	ENSG00000155368.18	ENST00000535757.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2835.04347409348	2114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	NA	False	NA	60	True	ATTAAA	-28	NA	119366923	119372550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367091_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_80807.known	chr2	+	774	4	FSM	ENSG00000155368.18	ENST00000460901.1	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	2659.25883575773	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACAGATTAGGGGCTA	98	False	NA	-36	True	NA	NA	NA	119367080	119372454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367464_119368187_119368306_119370739_119370803_119372244
transcript_80808.known	chr2	+	620	4	FSM	ENSG00000155368.18	ENST00000627305.2	620	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2702.58917007788	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATAACCAGTTAAACC	270	False	NA	-83	True	NA	NA	NA	119367252	119372407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367529_119368187_119368306_119370739_119370803_119372244
transcript_80809.known	chr2	+	599	4	FSM	ENSG00000155368.18	ENST00000393103.2	599	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2701.17620470951	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATAACCAGTTAAACC	-4	True	NA	-83	True	NA	NA	NA	119367676	119372407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367932_119368187_119368306_119370739_119370803_119372244
transcript_80810.known	chr2	+	564	4	FSM	ENSG00000155368.18	ENST00000355857.8	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	5555	junction_1	139.75534177825	26511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAGTGATCTGAGTT	-6	True	NA	53	True	ATTAAA	-21	NA	119366976	119372543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367061_119368187_119368306_119370739_119370803_119372244
transcript_80811.known	chr2	+	654	4	FSM	ENSG00000155368.18	ENST00000535617.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2702.58917007788	2418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	NA	False	NA	60	True	ATTAAA	-28	NA	119366923	119372550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367091_119368187_119368306_119370739_119370803_119372244
transcript_80812.known	chr2	+	842	2	FSM	ENSG00000155368.18	ENST00000475783.1	842	2	0	0	0	0	multi-exon	FALSE	canonical	3	5589	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTATCTGAAATCAATT	1999	False	NA	10	True	GGGGCT	-28	NA	119370216	119372500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119370803_119372244
transcript_80814.known	chr2	+	1687	2	FSM	ENSG00000171227.7	ENST00000306406.5	1687	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTGCCCAGAAGTAG	-5	True	NA	18	True	ATTAAA	-18	NA	119431853	119438504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119431925_119436888
transcript_80817.known	chr2	+	820	2	FSM	ENSG00000171227.7	ENST00000465296.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGAAACGGCTGCCTG	231	False	NA	NA	False	GGGGCT	-13	NA	119432089	119437547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119432251_119436888
transcript_8082.known	chr1	+	1028	7	FSM	ENSG00000134184.13	ENST00000349334.7	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	71.6674418562727	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGCTGTGTGTCTTGTC	-4	True	NA	NA	False	AGTAAA	-11	NA	109687839	109693743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109690270_109690367_109693205
transcript_80823.known	chr2	+	964	7	FSM	ENSG00000163075.13	ENST00000594033.5	964	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.8781125813871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCCTTCATTTATAA	0	True	NA	NA	False	NA	NA	NA	119544470	119562066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119544511_119546084_119546271_119549084_119549186_119557007_119557406_119559688_119559776_119559927_119560027_119562013
transcript_80825.nnic	chr2	+	657	6	NNC	ENSG00000163075.13	novel	779	7	NA	NA	-2	855	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	10.0717426496113	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATAGTGTTGTCTCTGAC	-12	True	NA	NA	False	TATAAA	-26	NA	119544429	119560832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_119544511_119546084_119546271_119549084_119549186_119559688_119559776_119559927_119560027_119560729
transcript_80826.nic	chr2	+	807	6	ISM	ENSG00000163075.13	ENST00000598644.5	1532	7	-55	11204	-2	152	5prime_fragment	FALSE	canonical	3	17	junction_1	4.4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAAGCAAAAACCAAACA	-12	True	NA	NA	False	AATAGA	-37	NA	119544429	119562266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_119544511_119546084_119546271_119549084_119549186_119559688_119559776_119559927_119560027_119562013
transcript_80828.nic	chr2	+	706	4	ISM	ENSG00000163075.13	ENST00000463985.6	689	6	-19	3603	-2	-3603	5prime_fragment	FALSE	canonical	1	1	junction_3	11.4697670227235	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTGTTGTTTCTTATTT	-12	True	NA	6	True	ACTAAA	-18	NA	119544429	119556374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_119544511_119546084_119546271_119549084_119549186_119556036
transcript_80844.nnic	chr2	+	386	4	NNC	ENSG00000144120.13	novel	1216	3	NA	NA	-16	1314	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	3.29983164553722	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTGGTGTGGTAACTT	NA	False	NA	4	True	AATAAA	-16	NA	119679150	119687821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_119679226_119685657_119685755_119686752_119686875_119687729
transcript_80848.nnic	chr2	+	426	4	NNC	ENSG00000144120.13	novel	1216	3	NA	NA	-5	1314	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	4.54606056566195	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTGGTGTGGTAACTT	-9	True	NA	4	True	AATAAA	-16	NA	119679161	119687821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_119679277_119685657_119685755_119686752_119686875_119687729
transcript_80855.known	chr2	+	1346	2	FSM	ENSG00000144120.13	ENST00000401466.5	1346	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	-4	True	NA	34	True	AATAAA	-16	NA	119679166	119682118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119679226_119680831
transcript_80856.known	chr2	+	1363	2	FSM	ENSG00000144120.13	ENST00000272521.7	1363	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	0	True	NA	34	True	AATAAA	-16	NA	119679200	119682118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119679277_119680831
transcript_80857.known	chr2	+	791	2	FSM	ENSG00000144120.13	ENST00000445518.1	791	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCAACACTAACCATCC	-10	True	NA	NA	False	GGGGCT	-37	NA	119679190	119681195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119679618_119680831
transcript_80858.nnic	chr2	-	651	3	Antisense	novelGene_ENSG00000229326.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGTGTGAGGCAGTG	NA	False	NA	NA	False	AATAAA	-19	NA	119700957	119691521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_119691667_119691844_119691988_119700594
transcript_8086.known	chr1	+	790	6	FSM	ENSG00000134184.13	ENST00000369819.2	790	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	78.1035210473894	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGCTCAGCCCCGAGCT	14	False	NA	NA	False	TTTAAA	-23	NA	109687857	109693619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109687910_109688169_109688246_109688672_109688738_109689047_109689130_109689224_109689326_109693205
transcript_80860.nnic	chr2	-	888	2	Antisense	novelGene_ENSG00000229326.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAGAATGTTGTGTGAGG	NA	False	NA	NA	False	AATAAA	-14	NA	119701021	119691526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_119691988_119700594
transcript_80862.known	chr2	+	11090	27	FSM	ENSG00000088179.9	ENST00000263708.7	11090	27	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	29.9858201202506	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGAAGTTTTGAAGATT	17	True	NA	9	True	AATAAA	-22	NA	119759921	119984899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119760385_119809836_119809992_119862535_119862644_119877322_119877366_119877463_119877543_119881785_119881831_119882096_119882150_119882502_119882624_119885794_119885883_119900717_119900807_119915178_119915243_119920068_119920242_119926597_119926667_119932423_119932550_119934799_119934959_119945080_119945241_119946340_119946425_119946517_119946575_119951972_119952130_119955156_119955324_119956843_119956935_119957015_119957078_119960806_119960954_119962615_119962745_119965496_119965646_119967836_119967973_119976983
transcript_80868.known	chr2	+	1777	17	FSM	ENSG00000115109.14	ENST00000331393.8	1777	17	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_16	38.6603802361022	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAAGGAATCAAGGAAG	3	True	NA	NA	False	NA	NA	NA	120013118	120104399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120104059
transcript_80880.nic	chr2	+	1936	2	ISM	ENSG00000115109.14	ENST00000331393.8	1777	17	-91	83570	-49	-53571	5prime_fragment	FALSE	canonical	3	305	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTTTAAAAACGCAGT	NA	False	NA	NA	False	NA	NA	NA	120013027	120020829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_120013211_120019076
transcript_80883.known	chr2	+	767	6	FSM	ENSG00000144118.14	ENST00000431732.5	767	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	169.625941412273	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAGAGAAATCAGAACAAA	-11	True	NA	NA	False	NA	NA	NA	120252849	120293155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_120252981_120278617_120278779_120280834_120280908_120285873_120286083_120289579_120289758_120293140
transcript_80887.known	chr2	+	1931	5	FSM	ENSG00000144118.14	ENST00000470417.1	1931	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	149.673812004639	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTTTTTGAATAAAAA	14	True	NA	-1	True	AAAACA	-30	NA	120252874	120294676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_120252981_120278617_120278713_120286066_120286083_120289579_120289758_120293140
transcript_80888.known	chr2	+	2247	5	FSM	ENSG00000144118.14	ENST00000272519.10	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	68.3241355598444	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	-9	True	NA	33	True	AATAAA	-17	NA	120252851	120294710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_120252981_120278617_120278779_120285873_120286083_120289579_120289758_120293140
transcript_809.known	chr1	-	700	4	FSM	ENSG00000242485.6	ENST00000344843.12	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	33.1762967593833	13502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-19	True	NA	-12	True	AATGAA	-17	NA	1407293	1401908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1402257_1405808_1405887_1406908_1407020_1407130
transcript_80900.known	chr2	+	682	2	FSM	ENSG00000265451.1	ENST00000577914.1	682	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTGTGCAACAGAAAG	NA	False	NA	NA	False	ACTAAA	-20	NA	121530421	121532705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121530776_121532377
transcript_80909.known	chr2	+	1232	4	FSM	ENSG00000236859.8	ENST00000662168.1	1232	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.48528137423857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	-25	True	NA	12	True	AATAAA	-18	NA	121649620	121728563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121649737_121650467_121650683_121705767_121705908_121727802
transcript_80910.known	chr2	+	1416	4	FSM	ENSG00000236859.8	ENST00000419902.3	1416	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.73053390247253	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	-18	True	NA	12	True	AATAAA	-18	NA	121650081	121728563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121650382_121650467_121650683_121705767_121705908_121727802
transcript_80917.known	chr2	+	1411	3	FSM	ENSG00000236859.8	ENST00000414554.7	1414	3	2	1	2	0	multi-exon	FALSE	canonical	1	2	junction_1	8.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	4	True	NA	10	True	ACTAAA	-19	NA	121649649	121651535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121649912_121650300_121650382_121650467
transcript_80933.known	chr2	+	1182	2	FSM	ENSG00000236859.8	ENST00000413904.6	1182	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	152	False	NA	10	True	ACTAAA	-19	NA	121649797	121651535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121649912_121650467
transcript_80937.known	chr2	+	1168	2	FSM	ENSG00000236859.8	ENST00000668016.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCACTTGTGTTATTTC	-8	True	NA	11	True	ACTAAA	-20	NA	121649637	121651536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121649737_121650467
transcript_80938.known	chr2	+	1368	2	FSM	ENSG00000236859.8	ENST00000447668.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	-18	True	NA	10	True	ACTAAA	-19	NA	121650081	121651535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121650382_121650467
transcript_80943.known	chr2	-	1686	7	FSM	ENSG00000155438.12	ENST00000285814.9	1686	7	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_3	70.0541457255267	2118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGCTTGTGCCTGTA	-2	True	NA	1	True	ATTAAA	-16	NA	121736875	121726944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_121727913_121728287_121728357_121728476_121728537_121730892_121731105_121732095_121732205_121735612_121735751_121736745
transcript_80944.known	chr2	+	1273	3	FSM	ENSG00000236859.8	ENST00000439321.1	1273	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTTGTGTTATTTCCA	337	False	NA	13	True	ACTAAA	-22	NA	121649982	121651538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121650104_121650300_121650382_121650467
transcript_80946.known	chr2	+	555	6	FSM	ENSG00000211460.12	ENST00000455432.5	555	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	421.381822104371	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCGCCTTCTCAACCTG	-4	True	NA	NA	False	NA	NA	NA	121737102	121765218	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121737186_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_80948.known	chr2	+	2843	6	FSM	ENSG00000211460.12	ENST00000467324.5	2843	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	417.411355858942	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGCTGCTGTAAGAA	-16	True	NA	22	True	AATAAA	-23	NA	121755658	121767294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755954_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_80952.known	chr2	+	605	5	FSM	ENSG00000211460.12	ENST00000495112.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	456.917593773757	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAGTAGAGGAAGTG	10	True	NA	NA	False	NA	NA	NA	121755684	121765284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755846_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_80958.known	chr2	+	1118	3	FSM	ENSG00000211460.12	ENST00000498545.5	1118	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	569.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTATTAAGGGATTTA	-15	True	NA	26	True	ATTAAA	-36	NA	121755659	121765985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755846_121763004_121763085_121765133
transcript_80962.known	chr2	+	3302	6	FSM	ENSG00000211460.12	ENST00000389682.8	3302	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	421.778899424805	1976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	-24	True	NA	18	True	ATTAAA	-29	NA	121755650	121767853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_80963.known	chr2	+	2717	6	FSM	ENSG00000211460.12	ENST00000490104.5	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	513.253543582507	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTCTTGGAATTCCA	-12	True	NA	3	True	ATTAAA	-13	NA	121755662	121767179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755846_121757239_121757435_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_80966.known	chr2	+	663	3	FSM	ENSG00000224655.7	ENST00000422238.6	663	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATTTCCATATTAATAAT	NA	False	NA	NA	False	AATAAA	-29	NA	121790446	121795040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121790520_121793188_121793236_121794497
transcript_80967.known	chr2	+	347	2	FSM	ENSG00000155052.15	ENST00000470921.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACCAGAGTATATTTCCG	NA	False	NA	NA	False	AATAAA	-18	NA	124221704	124242441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_124221810_124242199
transcript_80968.known	chr2	+	604	3	FSM	ENSG00000235774.2	ENST00000435352.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCACATTAAAATCTTAGCA	5	True	NA	NA	False	AATAAA	-17	NA	126308509	126343992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_126308646_126312300_126312538_126343761
transcript_80970.known	chr2	+	1018	4	FSM	ENSG00000136732.16	ENST00000259254.9	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	21.2289111041209	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCCGAGTCCAACAGTA	2	True	NA	14	True	AATAAA	-17	NA	126656157	126696667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_126656313_126690254_126690312_126693863_126693948_126695945
transcript_80971.known	chr2	+	932	3	FSM	ENSG00000136732.16	ENST00000409836.3	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	97.5	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATTCCGAGTCCAACA	-11	True	NA	11	True	AATAAA	-14	NA	126656183	126696664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_126656313_126693863_126693948_126695945
transcript_80972.known	chr2	+	1341	2	FSM	ENSG00000136732.16	ENST00000484700.2	1341	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTCATCTTGTTTTT	-23	True	NA	NA	False	AATAAA	-16	NA	126656132	126658767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_126656313_126657606
transcript_80973.known	chr2	+	1266	4	FSM	ENSG00000286971.1	ENST00000659964.1	1266	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTGTCATGCAATGAAAA	NA	False	NA	NA	False	AATAAA	-20	NA	127024865	127033948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_127024958_127030810_127031039_127031834_127032507_127033674
transcript_80980.known	chr2	-	5082	9	FSM	ENSG00000186684.14	ENST00000664447.2	5082	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5.49431524395898	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGATCAATAATCTCATC	0	True	NA	NA	False	AATAAA	-21	NA	127220299	127183831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127187388_127193093_127193298_127193788_127193868_127195334_127195502_127199375_127199540_127201121_127201332_127203371_127203572_127205899_127206091_127219988
transcript_80981.known	chr2	-	2327	8	FSM	ENSG00000186684.14	ENST00000409327.2	2327	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	8.93970734123544	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	127220313	127186409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127187388_127193093_127193298_127193788_127193868_127195334_127195502_127199375_127199540_127201121_127201332_127203371_127203572_127219988
transcript_80984.known	chr2	-	2345	15	FSM	ENSG00000163161.14	ENST00000644317.1	2345	15	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_13	92.9452329413973	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGATGCATCAAGGGC	6	True	NA	NA	False	NA	NA	NA	127294098	127257474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292705_127293512_127293719_127294053
transcript_80985.known	chr2	-	2718	15	FSM	ENSG00000163161.14	ENST00000285398.7	2718	15	0	0	0	0	multi-exon	FALSE	canonical	1	106	junction_12	61.7180885071758	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	8	True	NA	-9	True	AATAAA	-23	NA	127294144	127257289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_8099.known	chr1	+	1394	8	FSM	ENSG00000168765.18	ENST00000369836.9	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	13.399664936414	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	-15	True	NA	13	True	AATAAA	-13	NA	109656098	109661700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_80993.nic	chr2	-	632	2	ISM	ENSG00000163161.14	ENST00000490062.1	576	3	-27	779	-14	-779	5prime_fragment	FALSE	canonical	3	309	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTGTTTCCTCAAATAA	9166	False	NA	0	True	AATAAA	-18	NA	127294180	127293213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_127293719_127294053
transcript_80995.known	chr2	+	489	3	FSM	ENSG00000236682.3	ENST00000692842.1	559	3	64	6	0	0	multi-exon	FALSE	canonical	3	63	junction_1	15	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGATAAATTTTTTCC	9	True	NA	14	True	AATAAA	-23	NA	127388241	127389411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_127388312_127388880_127388999_127389110
transcript_80997.known	chr2	+	615	3	FSM	ENSG00000236682.3	ENST00000654207.2	620	3	0	5	0	-1	multi-exon	FALSE	canonical	2	3	junction_1	45	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATCTAGAGATAAATTT	235	False	NA	9	True	AATAAA	-18	NA	127388183	127389406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_127388385_127388880_127388999_127389110
transcript_810.known	chr1	+	2196	2	FSM	ENSG00000224870.8	ENST00000418833.2	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAACAAACTGCAAATTA	6	True	NA	-1	True	GATAAA	-12	NA	1399529	1402026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1400304_1400604
transcript_8100.known	chr1	+	1321	8	FSM	ENSG00000168765.18	ENST00000326729.9	1321	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	47.9178719162234	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATCTTAGTGGTGTC	8	True	NA	3	True	AATAAA	-17	NA	109656121	109665496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109665010
transcript_81003.known	chr2	+	779	2	FSM	ENSG00000115718.18	ENST00000402125.2	779	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGCCTGCTGTTCTGTC	4	True	NA	NA	False	ATTAAA	-18	NA	127423288	127429015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_127423409_127428356
transcript_8101.known	chr1	+	1159	7	FSM	ENSG00000168765.18	ENST00000495742.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	53.5371107011036	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	97	False	NA	13	True	AATAAA	-13	NA	109656251	109661700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_81012.known	chr2	-	2973	14	FSM	ENSG00000163166.15	ENST00000295321.9	2973	14	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_10	46.0244339531738	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-10	True	NA	-19	True	AATAAA	-15	NA	127526489	127480811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
transcript_81021.known	chr2	-	608	4	FSM	ENSG00000163166.15	ENST00000436740.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	231.459619708397	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCGACTCTGAGAGTGA	-6	True	NA	NA	False	NA	NA	NA	127526440	127505554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127505753_127506691_127506720_127523675_127523792_127526174
transcript_81023.nic	chr2	-	1432	3	ISM	ENSG00000163166.15	ENST00000295321.9	2973	14	-28	23968	-28	218	5prime_fragment	FALSE	canonical	3	453	junction_1	19	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAGTGATGAAGATGAA	NA	False	NA	-18	True	AAAAAG	-8	NA	127526517	127504779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_127505753_127523675_127523792_127526174
transcript_81024.known	chr2	-	1080	3	FSM	ENSG00000163166.15	ENST00000409725.1	1080	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	204	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGGAAAATGAGGAGCTAC	NA	False	NA	NA	False	NA	NA	NA	127526886	127505039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127505753_127523675_127523792_127526635
transcript_81025.known	chr2	-	870	2	FSM	ENSG00000163166.15	ENST00000486662.1	870	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGGAGCTTCCCAAA	-3	True	NA	NA	False	NA	NA	NA	127526482	127505190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127505753_127526174
transcript_81027.nic	chr2	-	1395	3	ISM	ENSG00000072163.20	ENST00000426981.5	1409	5	1546	45	-182	0	3prime_fragment	FALSE	canonical	3	26	junction_2	0.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	0	True	NA	-5	True	AATGAA	-16	NA	127640585	127638425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_127639429_127640069_127640146_127640269
transcript_81028.known	chr2	-	1137	2	FSM	ENSG00000072163.20	ENST00000494613.5	1137	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	13	True	NA	-5	True	AATGAA	-16	NA	127640403	127638425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127639429_127640269
transcript_81029.known	chr2	-	2387	10	FSM	ENSG00000072163.20	ENST00000355119.9	2387	10	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_9	6.03692342542494	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	-6	True	NA	-5	True	AATGAA	-16	NA	127675530	127638425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127639429_127640069_127640146_127640269_127640319_127640895_127640989_127642048_127642200_127642922_127643073_127654423_127654545_127654829_127654897_127657402_127657563_127675013
transcript_8103.known	chr1	-	4046	8	FSM	ENSG00000134202.12	ENST00000256594.7	4046	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	7.8141681892442	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCCATGTGCCTAATTT	547	False	NA	NA	False	AATAAA	-25	NA	109740516	109733931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832_109739909_109740239
transcript_81033.known	chr2	-	3574	8	FSM	ENSG00000136709.12	ENST00000393006.5	3574	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.115976047421	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTCAGACTGTTCACC	0	True	NA	30	True	AATAAA	-14	NA	127811171	127735387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127738055_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_81045.known	chr2	-	3104	6	FSM	ENSG00000136709.12	ENST00000409658.7	3104	6	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_2	15.239422561239	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATTAATAAACCTCT	0	True	NA	-45	True	NA	NA	NA	127811171	127762532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_81048.known	chr2	-	9490	22	FSM	ENSG00000136709.12	ENST00000322313.9	9490	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_9	62.1740297658457	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGACCTGTGTAACTCA	0	True	NA	-5	True	AATAAA	-19	NA	127811171	127701026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127706553_127708676_127708893_127709489_127709583_127709692_127709857_127713582_127714022_127717154_127717264_127719264_127720354_127721835_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_81051.known	chr2	-	5038	4	FSM	ENSG00000144231.11	ENST00000272645.9	5038	4	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_3	38.5774833578115	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGTCAGATAATTTT	-20	True	NA	NA	False	AATAAA	-16	NA	127858155	127843552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127848186_127850589_127850686_127852924_127853106_127858027
transcript_81056.known	chr2	-	1758	3	FSM	ENSG00000144231.11	ENST00000409955.1	1758	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	300.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	18	True	NA	-40	True	AAGAAA	-5	NA	127858117	127846698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127848186_127852924_127853106_127858027
transcript_81059.known	chr2	-	1037	2	FSM	ENSG00000144231.11	ENST00000487079.1	1037	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCATAGCCCCTTGA	16	True	NA	NA	False	NA	NA	NA	127858119	127847240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127848186_127858027
transcript_8106.known	chr1	-	783	7	FSM	ENSG00000134202.12	ENST00000486823.5	783	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	18.6435869224067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATATGTGGAGAATC	736	False	NA	39	True	TATAAA	-13	NA	109740327	109736929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109740239
transcript_81060.known	chr2	-	4692	8	FSM	ENSG00000144233.11	ENST00000272647.10	4692	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	11.3999641961486	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTTTGTTCTGCTTTTTC	-6	True	NA	-15	True	AATAAA	-17	NA	127885956	127861629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127865206_127866899_127866997_127869453_127869545_127870813_127870929_127871248_127871360_127873827_127874273_127884202_127884313_127885809
transcript_81061.known	chr2	-	4349	5	FSM	ENSG00000144233.11	ENST00000679574.1	4349	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	32.368001173999	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATGGATAAAAATCGTT	5	True	NA	-30	True	AATAAA	-2	NA	127885945	127861644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127865206_127866899_127866997_127873827_127874273_127884202_127884313_127885809
transcript_81067.known	chr2	+	10761	41	FSM	ENSG00000136731.13	ENST00000259253.11	10761	41	0	0	0	0	multi-exon	FALSE	canonical	2	67	junction_22	19.1479600741176	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGTCATTTGGCCTT	-5	True	NA	39	True	AGTAAA	-22	NA	128091199	128195677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_128091416_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
transcript_81068.known	chr2	+	6682	41	FSM	ENSG00000136731.13	ENST00000376723.7	6682	41	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	23.8899037252141	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAGCTCAAAAGAGGA	6	True	NA	NA	False	AATGAA	-27	NA	128091210	128191428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_128091597_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
transcript_81074.known	chr2	-	1743	3	FSM	ENSG00000229536.3	ENST00000669319.1	1743	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGCTCATTACTAGGG	NA	False	NA	NA	False	AATAAA	-28	NA	129877529	129868134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_129869536_129872605_129872752_129877333
transcript_81075.known	chr2	-	400	3	FSM	ENSG00000214100.9	ENST00000433290.6	407	3	5	2	-1	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTGTCTGCTGACAG	11	True	NA	NA	False	AATAAA	-18	NA	129934317	129922862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_129923000_129923557_129923682_129934178
transcript_81078.known	chr2	-	1329	8	FSM	ENSG00000152076.19	ENST00000409943.8	1329	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	13.0571741168741	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145112	130139286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142184_130143268_130143314_130144746
transcript_81079.known	chr2	-	1549	8	FSM	ENSG00000152076.19	ENST00000310463.10	1549	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	11.141025490483	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	130145134	130139286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142382_130143268_130143314_130144746
transcript_81081.known	chr2	-	3661	19	FSM	ENSG00000136699.20	ENST00000351288.10	3661	19	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	76.6949223293896	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	-7	True	NA	NA	False	AATAAA	-18	NA	130181601	130151407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_81084.known	chr2	+	769	4	FSM	ENSG00000152082.15	ENST00000409255.1	769	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	950.602031463337	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGTCCAGGTCAGATGT	-8	True	NA	26	True	AATAAA	-15	NA	130182256	130190712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130182453_130182626_130182776_130183786_130183967_130190468
transcript_81085.known	chr2	+	455	3	FSM	ENSG00000152082.15	ENST00000425361.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	983	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGGTCAGATGTT	53	False	NA	27	True	AATAAA	-16	NA	130181736	130190713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130181798_130182626_130182776_130190468
transcript_81086.known	chr2	+	435	3	FSM	ENSG00000152082.15	ENST00000457492.5	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1004	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTCTGAGATGCAGA	88	False	NA	9	True	NA	NA	NA	130181771	130190695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130181831_130182626_130182776_130190468
transcript_81088.known	chr2	+	599	3	FSM	ENSG00000152082.15	ENST00000281871.11	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	2024	junction_2	1	2246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	-3	True	NA	41	True	AATAAA	-30	NA	130182261	130190727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130182453_130182626_130182776_130190468
transcript_81092.known	chr2	-	3768	19	FSM	ENSG00000136699.20	ENST00000680679.1	3768	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	181.640747386458	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAAACATGTCCTTGC	-2	True	NA	NA	False	AATGAA	-20	NA	130181596	130151433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156814_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_81093.known	chr2	+	480	2	FSM	ENSG00000152082.15	ENST00000480182.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	2024	junction_1	0	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	290	False	NA	41	True	AATAAA	-30	NA	130182554	130190727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130182776_130190468
transcript_81094.known	chr2	+	603	3	FSM	ENSG00000152082.15	ENST00000651060.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1012	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGAGATGCAGAGGGT	266	False	NA	13	True	AATAAA	-2	NA	130182223	130190699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130182447_130182626_130182776_130190468
transcript_81095.known	chr2	+	401	2	FSM	ENSG00000152082.15	ENST00000455239.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTACCGTTTTTTTT	48	False	NA	43	True	AATAAA	-32	NA	130182312	130190729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130182453_130190468
transcript_81096.known	chr2	-	3601	19	FSM	ENSG00000136699.20	ENST00000412570.5	3601	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_16	183.798878608597	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	1	True	NA	NA	False	AATAAA	-18	NA	130181593	130151407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173605_130174913_130175001_130176553_130176638_130181529
transcript_81097.known	chr2	-	2063	6	FSM	ENSG00000136710.10	ENST00000651709.1	2063	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	143.65737015552	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAACCACTACCCAACTT	-11	True	NA	-17	True	AGTAAA	-6	NA	130342699	130338257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_811.known	chr1	-	1693	3	FSM	ENSG00000242485.6	ENST00000487659.1	1693	3	0	0	0	0	multi-exon	FALSE	canonical	3	1624	junction_1	39.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTTAGAGTCATTT	6	True	NA	-16	True	AATGAA	-13	NA	1407268	1401912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1402257_1405808_1407020_1407130
transcript_81100.known	chr2	-	1247	5	FSM	ENSG00000136710.10	ENST00000409127.1	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	122.589763031013	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTCTGTTCTGGGA	364	False	NA	NA	False	NA	NA	NA	130342324	130338495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_81103.known	chr2	-	1769	5	FSM	ENSG00000136710.10	ENST00000259229.7	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_1	16.4069345095298	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTGAACTTTAACATAA	-12	True	NA	NA	False	AATACA	-20	NA	130342164	130337932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_81104.known	chr2	-	1847	6	FSM	ENSG00000136710.10	ENST00000442217.5	1847	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	141.203965949969	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	339	False	NA	-2	True	AGTAAA	-21	NA	130342349	130338242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_81105.known	chr2	+	924	9	FSM	ENSG00000136718.10	ENST00000428740.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	314.571037287287	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACTCACCACTCAGTC	33	True	NA	NA	False	NA	NA	NA	130342923	130346467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130342963_130343085_130343195_130344628_130344726_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_8111.known	chr1	+	3943	17	FSM	ENSG00000168710.18	ENST00000369799.10	3943	17	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_2	34.6968455878917	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGTCCGTATGTGTCA	-38	True	NA	33	True	ATTAAA	-25	NA	109984764	110023742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109985173_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_81114.known	chr2	+	2411	9	FSM	ENSG00000136718.10	ENST00000259239.8	2411	9	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	137.206049429316	2986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGTGTGATATGCTGT	6	True	NA	NA	False	ATTAAA	-23	NA	130342896	130347967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130342936_130343085_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_81115.known	chr2	+	2379	8	FSM	ENSG00000136718.10	ENST00000460766.5	2379	8	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_5	66.9443875198524	3096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	31	True	NA	30	True	AATAAA	-19	NA	130342921	130347810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_81116.nnic	chr2	+	900	4	NNC	ENSG00000072135.13	novel	993	9	NA	NA	107	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.1699998095456	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCAGAGGTCTGTTTTT	-11	True	NA	14	True	AATAAA	-14	NA	130372714	130375402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_130372948_130373156_130373221_130374665_130374918_130375051
transcript_81117.nic	chr2	+	1113	3	ISM	ENSG00000072135.13	ENST00000409022.2	993	9	2550	-539	31	0	3prime_fragment	FALSE	canonical	3	12	junction_2	27.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	-14	True	NA	17	True	AATAAA	-17	NA	130372638	130375405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_130372948_130373156_130373221_130374665
transcript_81119.known	chr2	+	1717	2	FSM	ENSG00000072135.13	ENST00000462321.1	1717	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTTAAAAGAAATAAAAGG	353	False	NA	-24	True	GATAAA	-12	NA	130372607	130374533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130372948_130373156
transcript_8112.known	chr1	+	2503	17	FSM	ENSG00000168710.18	ENST00000359172.3	2503	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	201.30076999356	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAATTAAGGAGA	23	True	NA	NA	False	NA	NA	NA	110004130	110022389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110004452_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_81129.known	chr2	-	603	6	FSM	ENSG00000178162.8	ENST00000433703.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	28.1595454508769	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAGTAGTCTCAAAGG	NA	False	NA	NA	False	AATAGA	-14	NA	130427775	130418233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_81133.known	chr2	-	555	5	FSM	ENSG00000178162.8	ENST00000423905.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	48.859492424707	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTTAGAGATGAATGAA	NA	False	NA	NA	False	NA	NA	NA	130427742	130418150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130427703
transcript_81134.nnic	chr2	-	2810	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-452	0	intron_retention	FALSE	canonical	3	29	junction_3	44.9075439096818	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130428628	130416754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_130418299_130419070_130419246_130425090_130425159_130426165_130426264_130427703
transcript_81139.known	chr2	-	2070	4	FSM	ENSG00000178162.8	ENST00000424873.5	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	40.7130882586369	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130427986	130416754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130427703
transcript_81145.nnic	chr2	+	1490	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-317	288	intron_retention	FALSE	canonical	1	2	junction_5	17.7471124411832	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	NA	False	NA	NA	False	AATAAA	-19	NA	130692964	130704749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130704557
transcript_81151.known	chr2	-	1273	2	FSM	ENSG00000233221.7	ENST00000446213.2	1273	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATTCGCTCTTCTCTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	130836994	130835437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130836026_130836309
transcript_81153.known	chr2	+	4349	9	FSM	ENSG00000115762.17	ENST00000403716.5	4349	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	255.514401502146	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	61	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166_131140276_131144407_131144450_131146636
transcript_81155.known	chr2	+	4208	8	FSM	ENSG00000115762.17	ENST00000234115.10	4208	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	188.526401550639	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGACTTCTGTTGTCTTT	158	False	NA	25	True	ATTAAA	-25	NA	131104943	131149852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140169_131140276_131146636
transcript_81158.known	chr2	+	2277	8	FSM	ENSG00000115762.17	ENST00000409158.5	2277	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	199.985305582634	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCT	61	False	NA	NA	False	NA	NA	NA	131104846	131147797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131133016_131140166_131140276_131146636
transcript_81163.known	chr2	+	1297	6	FSM	ENSG00000115762.17	ENST00000628582.2	1297	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	265.249316681495	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATACTTGGAGAACATAT	-4	True	NA	NA	False	NA	NA	NA	131105301	131147429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131140169_131140276_131146636
transcript_81166.known	chr2	+	644	4	FSM	ENSG00000115762.17	ENST00000482225.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_3	12.657891697365	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCATAGTTGAAATAAAAT	-11	True	NA	NA	False	NA	NA	NA	131105328	131127059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683
transcript_81170.known	chr2	+	1520	5	FSM	ENSG00000075886.11	ENST00000321253.7	1520	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTGTGTCGTGCAG	11	True	NA	NA	False	ATTAAA	-19	NA	131476118	131482934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131476203_131478163_131478387_131479307_131479457_131480068_131480750_131482551
transcript_8118.known	chr1	-	748	2	FSM	ENSG00000224965.1	ENST00000455967.1	748	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGCTGTCTTTGAGTTT	NA	False	NA	NA	False	NA	NA	NA	110209987	110208833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110209205_110209610
transcript_81183.known	chr2	-	382	3	FSM	ENSG00000173272.16	ENST00000410036.2	382	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	737.5	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCTACTGTTTTTTTT	NA	False	NA	-17	True	AATAAA	-32	NA	131492743	131483957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_131484219_131491875_131491973_131492719
transcript_81193.known	chr2	-	599	3	FSM	ENSG00000173272.16	ENST00000309451.7	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1480	junction_1	16	4610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-3	True	NA	-19	True	AATAAA	-30	NA	131492397	131483959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_131484219_131491875_131492025_131492206
transcript_81194.known	chr2	+	3785	18	FSM	ENSG00000152117.18	ENST00000438378.2	3785	18	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_8	32.2206922703505	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	NA	False	NA	34	True	AATAAA	-18	NA	131492812	131521573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131493141_131497209_131497294_131498866_131498954_131500203_131500347_131500505_131500582_131500961_131501071_131501180_131501234_131501357_131501509_131506311_131506443_131508536_131508609_131515601_131515748_131516313_131516405_131516856_131516958_131517726_131517891_131518502_131518709_131519049_131519284_131519534_131519667_131520096
transcript_81198.nic	chr2	+	1001	2	ISM	ENSG00000152117.18	ENST00000685795.1	1740	5	-278	3999	-29	-3999	5prime_fragment	TRUE	canonical	3	91	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACTGAGAAGTGAGAAG	NA	False	NA	NA	False	AGTAAA	-22	NA	131492783	131497853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_131493141_131497209
transcript_81201.known	chr2	+	1543	8	FSM	ENSG00000163040.15	ENST00000295171.10	1543	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	45.2002347835694	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	9655	False	NA	NA	False	AATAAA	-17	NA	131527832	131533666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_81203.known	chr2	+	1290	8	FSM	ENSG00000163040.15	ENST00000409856.8	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	36.8421896577214	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-9	True	NA	NA	False	AATAAA	-17	NA	131527887	131533666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_8122.known	chr1	+	3284	3	FSM	ENSG00000162775.17	ENST00000617047.1	3284	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	9.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	-5	True	NA	24	True	AATAAA	-20	NA	110339465	110346677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110342269_110345538_110345650_110346307
transcript_81220.known	chr2	+	2119	6	FSM	ENSG00000287151.1	ENST00000666411.1	2119	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	12.4995999935998	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTTTCACAAAGAAAAAAA	-30	True	NA	NA	False	AATGAA	-4	NA	131682480	131698401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131696868
transcript_81223.nic	chr2	+	992	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	-37	44625	-37	-266	5prime_fragment	FALSE	canonical	3	6	junction_1	10.2176318195558	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTTTTATATTAATG	NA	False	NA	NA	False	AATAAA	-17	NA	131682437	131722779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_81224.nic	chr2	+	1158	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	-37	44459	-37	-100	5prime_fragment	FALSE	canonical	3	6	junction_1	10.2176318195558	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATTCAGCTTTTAC	NA	False	NA	NA	False	AATAAA	-18	NA	131682437	131722945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_81229.nnic	chr2	+	1379	6	NNC	ENSG00000287151.1	novel	2005	10	NA	NA	1	-266	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_1	7.24982758415674	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTTTTATATTAATG	-29	True	NA	NA	False	AATAAA	-17	NA	131682481	131722779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_131682989_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_81230.nnic	chr2	+	1545	6	NNC	ENSG00000287151.1	novel	2005	10	NA	NA	1	-100	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	7.24982758415674	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATTCAGCTTTTAC	-29	True	NA	NA	False	AATAAA	-18	NA	131682481	131722945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_131682989_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_81236.nic	chr2	+	989	6	NIC	ENSG00000287151.1	novel	2005	10	NA	NA	2	-266	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	10.571660229122	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTTTTATATTAATG	-28	True	NA	NA	False	AATAAA	-17	NA	131682482	131722779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_131682600_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_81237.nic	chr2	+	1155	6	NIC	ENSG00000287151.1	novel	2005	10	NA	NA	2	-100	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	10.571660229122	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATTCAGCTTTTAC	-28	True	NA	NA	False	AATAAA	-18	NA	131682482	131722945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_131682600_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_8124.nnic	chr1	-	987	3	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	8	-22772	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCGTTCAGAATTGCAT	0	True	NA	-12	True	ATTAAA	-14	NA	110339145	110315031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_110315752_110318764_110318883_110338996
transcript_81241.nnic	chr2	-	688	3	Genic_Genomic	ENSG00000226886.1	novel	207	1	NA	NA	34	8957	multi-exon	FALSE	canonical	3	5	junction_2	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGTTGCAAAGTCAT	68	False	NA	NA	False	NA	NA	NA	132037959	132028829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_132029179_132037308_132037476_132037787
transcript_81243.known	chr2	+	2793	4	FSM	ENSG00000018607.8	ENST00000675302.1	2793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGAGGAGGGTGAATCATG	NA	False	NA	NA	False	TATAAA	-30	NA	132304805	132322666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_132304915_132309265_132309324_132312868_132312996_132320167
transcript_81245.known	chr2	-	1682	1	FSM	ENSG00000272769.1	ENST00000608279.1	1682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATTCTTCACGCCGC	NA	False	NA	NA	False	AATAAA	-19	NA	132347297	132345615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_132345600_132347300
transcript_81246.known	chr2	+	2576	2	FSM	ENSG00000183840.7	ENST00000329321.4	2576	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTGTACAAGACACAGC	-26	True	NA	32	True	AATAAA	-43	NA	132416804	132646582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_132417899_132645100
transcript_81247.nnic	chr2	-	449	3	NNC	ENSG00000150551.11	novel	3458	3	NA	NA	297	-8399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGCAGTTTCTATATATC	242	False	NA	NA	False	AATAAA	-28	NA	132671282	132654185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_132654393_132668399_132668538_132671178
transcript_81248.known	chr2	-	1033	3	FSM	ENSG00000150551.11	ENST00000345008.6	1033	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGGCCAGGCTGGCAGA	NA	False	NA	NA	False	NA	NA	NA	132671579	132645786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_132646281_132668399_132668538_132671178
transcript_8125.nnic	chr1	-	574	3	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	-29	-23240	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	0.5	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGATAATGGCTGGGTTT	751	False	NA	NA	False	AATACA	-22	NA	110339200	110315499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_110315752_110318764_110318883_110338996
transcript_81250.known	chr2	+	669	5	FSM	ENSG00000226953.8	ENST00000606428.2	669	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	1.11803398874989	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTAAGTAAAGGTTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	133266241	133270464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_133266437_133267272_133267425_133268355_133268443_133268915_133269042_133270355
transcript_81251.known	chr2	+	1188	5	FSM	ENSG00000226953.8	ENST00000670944.1	1188	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.27760839478607	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTAGCAATGAGCTAG	NA	False	NA	NA	False	TTTAAA	-31	NA	133266364	133285445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_133266437_133267272_133267425_133268355_133268443_133268915_133269042_133284694
transcript_81252.known	chr2	+	3453	2	FSM	ENSG00000287463.1	ENST00000655237.1	3453	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTATAAGAAATTGAGTG	NA	False	NA	NA	False	CATAAA	-15	NA	134718187	134725474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_134718568_134722401
transcript_81256.known	chr2	-	3510	4	FSM	ENSG00000224043.8	ENST00000428857.2	3510	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6.34209919681348	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAAGCATAGCCATAT	750	False	NA	NA	False	AATATA	-37	NA	134918710	134864599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_134867740_134868943_134869042_134877519_134877644_134918562
transcript_81258.known	chr2	-	636	3	FSM	ENSG00000224043.8	ENST00000413962.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAACAAGCGTCAGGAA	-11	True	NA	NA	False	AATATA	-7	NA	134918678	134867317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_134867740_134868943_134869042_134918562
transcript_81259.nnic	chr2	-	420	2	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGAAGCTCCTTCCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	134825949	134825384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_134825561_134825705
transcript_8126.known	chr1	+	3214	2	FSM	ENSG00000162775.17	ENST00000654015.1	3214	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	-11	True	NA	24	True	AATAAA	-20	NA	110339424	110346677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110342269_110346307
transcript_81261.known	chr2	+	4491	10	FSM	ENSG00000082258.13	ENST00000295238.10	4491	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_9	77.4622169946639	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATTGTGTGAGCTATTC	-14	True	NA	10	True	ATTAAA	-23	NA	134918824	134957017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229_134954380_134954480
transcript_81263.known	chr2	+	6920	9	FSM	ENSG00000082258.13	ENST00000264157.10	6920	9	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_7	43.5545634807651	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCTCTAACATGTCT	-17	True	NA	NA	False	AATAAA	-21	NA	134918821	134959342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229
transcript_81266.known	chr2	+	606	5	FSM	ENSG00000082258.13	ENST00000475094.1	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	9.13783344124853	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCATTAAAATTAGGGAG	-2	True	NA	NA	False	NA	NA	NA	134918836	134942769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611
transcript_81267.known	chr2	+	4185	25	FSM	ENSG00000115839.19	ENST00000442034.5	4185	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	47.2475014036604	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATCTATATATAATAT	8	True	NA	NA	False	AATAGA	-41	NA	135052297	135169989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135167692_135167714_135168544
transcript_8127.known	chr1	-	1551	8	FSM	ENSG00000168679.18	ENST00000492412.2	1551	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.72554057547699	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGACTGCAATCAAGTG	9	True	NA	NA	False	AAAACA	-16	NA	110391048	110363761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110363894_110375457_110375552_110376949_110377162_110378852_110379357_110380981_110381144_110381651_110381796_110389236_110389356_110390864
transcript_81270.known	chr2	+	4891	24	FSM	ENSG00000115839.19	ENST00000264158.13	4891	24	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	19.8799801455135	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTAGGAGTTTCTTCA	2	True	NA	NA	False	AATAAA	-18	NA	135052291	135170710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135168544
transcript_81277.nic	chr2	+	1261	13	ISM	ENSG00000115839.19	ENST00000689880.1	3647	19	-22	24510	-22	0	5prime_fragment	FALSE	canonical	3	106	junction_1	20.4903432539981	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACTATTCTCCTGGTAA	NA	False	NA	NA	False	AAAACA	-40	NA	135052266	135130705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551
transcript_81278.nnic	chr2	+	592	6	NNC	ENSG00000115839.19	novel	3935	18	NA	NA	-22	-19550	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	60.2308890852526	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAATTTTTTAAATCATTA	NA	False	NA	NA	False	AATAAA	-15	NA	135052266	135111155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135110966
transcript_81281.known	chr2	+	1139	3	FSM	ENSG00000115839.19	ENST00000425393.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	30.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTATTTGTATCAATA	9	True	NA	NA	False	NA	NA	NA	135052298	135059066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135052326_135052429_135052486_135058010
transcript_81282.known	chr2	+	446	2	FSM	ENSG00000115839.19	ENST00000497080.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATACATATC	NA	False	NA	NA	False	AATAGA	-29	NA	135168547	135169977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135168750_135169733
transcript_81283.known	chr2	-	6712	21	FSM	ENSG00000121988.18	ENST00000264159.11	6712	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	12.5078975051765	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTCTCTGCCCTAGCA	-21	True	NA	1	True	ATTAAA	-22	NA	135531218	135196968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_135200441_135202831_135202964_135207433_135207837_135208867_135208979_135217464_135217608_135219076_135219179_135224425_135224518_135227811_135228016_135230512_135230928_135265533_135265687_135268961_135269142_135271767_135271888_135275635_135275756_135313488_135313606_135315358_135315531_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_81291.nnic	chr2	-	1752	7	NNC	ENSG00000121988.18	novel	546	4	NA	NA	-10	1364	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.1474740642593	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGAGTAATTTGTACTT	50	False	NA	NA	False	ATTAAA	-26	NA	135531228	135343771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_135344738_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_81296.nic	chr2	-	1112	7	NIC	ENSG00000121988.18	novel	823	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	16.2138486760204	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	50	False	NA	-18	True	AATAAA	-9	NA	135531228	135345135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_813.known	chr1	-	1632	3	FSM	ENSG00000235098.9	ENST00000520296.5	1632	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	931	False	NA	-1	True	AATAAA	-17	NA	1421444	1418419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1419550_1420815_1421006_1421132
transcript_81304.known	chr2	-	823	4	FSM	ENSG00000121988.18	ENST00000472452.1	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	17.326921891156	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	NA	False	NA	-18	True	AATAAA	-9	NA	135353628	135345135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449
transcript_81308.known	chr2	+	4272	23	FSM	ENSG00000048991.17	ENST00000409478.5	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_13	44.9216259649942	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	13	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
transcript_81315.nic	chr2	+	1218	9	ISM	ENSG00000048991.17	ENST00000409478.5	4272	23	-65	89083	-19	0	5prime_fragment	FALSE	canonical	3	198	junction_3	38.4770629726334	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTACTAACTTACTTAG	NA	False	NA	75	True	NA	NA	NA	135531435	135636183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087
transcript_81321.nic	chr2	+	785	5	NIC	ENSG00000048991.17	novel	4648	26	NA	NA	-19	-10173	combination_of_known_junctions	FALSE	canonical	3	65	junction_4	120.40219059469	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGATAAGTTGCCCA	NA	False	NA	NA	False	AAAAAG	-5	NA	135531435	135621570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_135531634_135602499_135602709_135604805_135605017_135616667_135616758_135621493
transcript_81325.nic	chr2	+	695	4	ISM	ENSG00000048991.17	ENST00000409478.5	4272	23	-65	103696	-19	-10173	5prime_fragment	FALSE	canonical	3	198	junction_3	51.6161042914149	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGTGATAAGTTGCCCA	NA	False	NA	NA	False	AAAAAG	-5	NA	135531435	135621570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493
transcript_81326.known	chr2	+	2241	3	FSM	ENSG00000048991.17	ENST00000463230.5	2241	3	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	8.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGGGAGGCAGAGGTTAC	-15	True	NA	NA	False	NA	NA	NA	135531472	135606676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135531634_135602499_135602709_135604805
transcript_81329.known	chr2	+	3771	13	FSM	ENSG00000144224.17	ENST00000272638.14	3771	13	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_7	62.7386554596836	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACCTTGCATCTTGC	-6	True	NA	9	True	AATAAA	-16	NA	135741854	135785056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
transcript_8134.known	chr1	-	694	5	FSM	ENSG00000134248.14	ENST00000483260.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	1127.42372247527	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	2	True	NA	-27	True	AATAAA	-21	NA	110407668	110401248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032_110407129_110407585
transcript_81340.nic	chr2	+	1027	8	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-229	14420	-108	8725	5prime_fragment	FALSE	canonical	3	434	junction_7	57.8562610162073	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAAGAAGAATTAACAAA	-8	True	NA	64	True	TATAAA	-7	NA	135741625	135770636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570
transcript_81343.nic	chr2	+	961	7	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-229	15233	-108	7912	5prime_fragment	FALSE	canonical	3	478	junction_3	45.6779183219006	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTTCATGCAGTTAGC	-8	True	NA	9	True	AAGAAA	-33	NA	135741625	135769823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768
transcript_81346.nic	chr2	+	906	6	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-229	23145	-108	0	5prime_fragment	FALSE	canonical	3	478	junction_3	49.5766073869522	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	-8	True	NA	20	True	NA	NA	NA	135741625	135761911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817
transcript_81350.known	chr2	+	1255	5	FSM	ENSG00000144224.17	ENST00000416538.5	1255	5	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_3	38.3438391400757	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	7	True	NA	20	True	NA	NA	NA	135741867	135761911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135742012_135748266_135748370_135753538_135754278_135755516_135755692_135761817
transcript_81354.known	chr2	+	568	4	FSM	ENSG00000144224.17	ENST00000426921.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	265.865045130461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGGACCTCAACATCC	12	True	NA	-10	True	NA	NA	NA	135741785	135761881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135742012_135748266_135748370_135755516_135755692_135761817
transcript_81355.known	chr2	-	3753	17	FSM	ENSG00000076003.5	ENST00000264156.3	3753	17	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_13	109.26859109552	3956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAATACTCAAGTAGAT	19	False	135876462	-12	True	AATAAA	-20	NA	135876443	135839625	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
transcript_81362.known	chr2	+	768	4	FSM	ENSG00000231890.9	ENST00000438432.5	768	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGAAAACCAAACACTGC	33	False	NA	NA	False	NA	NA	NA	135985218	136007472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135985517_135998686_135998839_136000438_136000480_136007195
transcript_81364.known	chr2	-	3099	16	FSM	ENSG00000115866.11	ENST00000264161.9	3099	16	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_8	63.7311715114529	2258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGTAATCTTTTTTA	-6	True	NA	-1	True	AATAAA	-16	NA	135985626	135905880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_135907408_135911138_135911211_135911381_135911494_135912485_135912567_135914468_135914512_135916225_135916373_135920452_135920601_135922783_135922919_135924386_135924499_135932782_135932843_135933909_135933991_135943377_135943481_135961395_135961499_135979273_135979367_135983396_135983455_135985402
transcript_81365.known	chr2	-	431	2	FSM	ENSG00000115866.11	ENST00000474184.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	900	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTGAA	2467	False	NA	NA	False	NA	NA	NA	135983447	135978986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_135979367_135983396
transcript_81367.known	chr2	-	1895	1	FSM	ENSG00000121966.7	ENST00000409817.1	1895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	3036	False	NA	-3	True	AATAAA	-18	NA	136116243	136114348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_136114300_136116200
transcript_81368.known	chr2	-	1668	2	FSM	ENSG00000121966.7	ENST00000241393.4	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	0	3167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	-1	True	NA	-3	True	AATAAA	-18	NA	136118149	136114348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_136115913_136118045
transcript_81372.known	chr2	+	3132	6	FSM	ENSG00000150540.14	ENST00000280097.5	3132	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	3.00665927567458	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCTTTCAGACAC	0	True	NA	NA	False	AATAAA	-32	NA	137964472	138016364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_137964629_137970164_137970218_138000917_138001026_138002063_138002195_138005131_138005226_138013774
transcript_81373.known	chr2	+	504	2	FSM	ENSG00000150540.14	ENST00000280096.5	504	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGCATGTGGAATAAC	0	True	NA	NA	False	AATAAA	-24	NA	137964472	137967444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_137964629_137967096
transcript_81375.known	chr2	+	6056	11	FSM	ENSG00000144228.9	ENST00000280098.9	6056	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	6.78527818147495	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCATTTGATGCTATC	-17	True	NA	NA	False	NA	NA	NA	138501769	138573547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_138502120_138550156_138550295_138550482_138550605_138550902_138551055_138552553_138552682_138559021_138559200_138559281_138559338_138560804_138560928_138564707_138564851_138564939_138564994_138568935
transcript_81377.known	chr2	-	2709	2	FSM	ENSG00000144227.5	ENST00000272641.4	2709	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTGGTTATTTTTTA	6	True	NA	2	True	AATAAA	-28	NA	138780390	138669156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_138671666_138780190
transcript_81382.nnic	chr2	+	773	3	NNC	ENSG00000115919.15	novel	1576	15	NA	NA	112222	139	at_least_one_novel_splicesite	TRUE	canonical	3	38	junction_1	6.5	319	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATATAATTTTTCAGAG	NA	False	NA	16	True	AATAAA	-20	NA	143039880	143042311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_143040158_143040427_143040659_143042046
transcript_81383.nnic	chr2	+	736	4	NNC	ENSG00000075884.14	novel	1670	14	NA	NA	21363	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTATGTGTTCTAC	5385	False	NA	13	True	AATAAA	-14	NA	143577770	143768352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_143577902_143624132_143624268_143703418_143703525_143767988
transcript_81384.known	chr2	-	677	1	FSM	ENSG00000284167.1	ENST00000639587.1	677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATGACCCACCAAACACAA	NA	False	NA	NA	False	AATACA	-1	NA	143100612	143099935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_143099900_143100600
transcript_81389.known	chr2	-	2954	12	FSM	ENSG00000121964.15	ENST00000409214.5	2954	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	34.019683169824	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAGCTTTTGAAATGAGT	NA	False	NA	NA	False	GATAAA	-37	NA	144294493	143945753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144294364
transcript_8139.known	chr1	+	1821	4	FSM	ENSG00000224699.10	ENST00000609512.6	1821	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTGCAGTGTCATTA	-8	True	NA	4	True	TATAAA	-29	NA	110407804	110416274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110409159_110412172_110412294_110414151_110414232_110416008
transcript_81390.known	chr2	-	10585	12	FSM	ENSG00000121964.15	ENST00000682281.1	10585	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	24.7362951454065	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTATGTGTGTGTGT	-15	True	NA	NA	False	AATAAA	-29	NA	144332512	143938067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_814.known	chr1	-	2024	4	FSM	ENSG00000235098.9	ENST00000537107.6	2024	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.64098759787715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	-3	True	NA	-1	True	AATAAA	-17	NA	1421276	1418419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1419550_1420051_1420593_1420796_1421006_1421132
transcript_81403.known	chr2	-	586	5	FSM	ENSG00000121964.15	ENST00000429978.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	47.9296359260114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTTTTCTTCCGGCA	3	True	NA	NA	False	NA	NA	NA	144332568	144178833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_144178961_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_81405.known	chr2	-	2677	12	FSM	ENSG00000121964.15	ENST00000542155.5	2677	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	33.3052498777818	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	37	True	NA	-7	True	AATAAA	-30	NA	144332534	143946015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211598_144235675_144235738_144332438
transcript_81406.known	chr2	-	2209	10	FSM	ENSG00000121964.15	ENST00000409298.5	2209	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.7519519567295	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	5369	False	NA	-7	True	AATAAA	-30	NA	144235737	143946015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
transcript_81407.known	chr2	-	2456	6	FSM	ENSG00000121964.15	ENST00000491448.5	2456	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	14.5958898324152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTGTCTTCCTTTGTA	5369	False	NA	NA	False	AATAAA	-23	NA	144235737	144005750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
transcript_81409.nic	chr2	+	584	2	ISM	ENSG00000226674.11	ENST00000629997.2	689	6	-4	6258	-4	0	5prime_fragment	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAATTTGATTTCCCGT	NA	False	NA	NA	False	AATAAA	-20	NA	145171993	145182649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_145172132_145182203
transcript_8141.known	chr1	-	1154	4	FSM	ENSG00000134248.14	ENST00000474861.6	1154	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	1050.92477794031	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-1	True	NA	-27	True	AATAAA	-21	NA	110407671	110401248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032
transcript_81420.known	chr2	+	2039	5	FSM	ENSG00000204406.14	ENST00000638090.1	2039	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	7.04893608993584	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCGACTTATCCAAAAG	168	False	NA	NA	False	NA	NA	NA	148021603	148347611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148021685_148178699_148178794_148233244_148233396_148342213_148342337_148346021
transcript_81426.nnic	chr2	+	1345	3	NNC	ENSG00000204406.14	novel	484	4	NA	NA	3	21912	intron_retention	FALSE	canonical	0	0	junction_2	5.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAATGTAATCTGGTT	3	True	NA	NA	False	NA	NA	NA	148021013	148200705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_148021685_148178699_148179272_148200603
transcript_81429.known	chr2	+	324	2	FSM	ENSG00000204406.14	ENST00000470063.5	324	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTAACTATAGCCC	19	True	NA	NA	False	ACTAAA	-2	NA	148021454	148178793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148021685_148178699
transcript_81430.known	chr2	+	4131	2	FSM	ENSG00000204406.14	ENST00000478190.3	4131	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCACATTCAATAAAAG	144	False	NA	NA	False	NA	NA	NA	148021237	148028649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148021685_148024965
transcript_81437.known	chr2	-	6710	15	FSM	ENSG00000115947.14	ENST00000535373.5	6710	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_14	152.151324378738	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	820	False	148020761	0	True	TATAAA	-17	NA	148020747	147930396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_147981927_147982082_148020632
transcript_81441.known	chr2	-	6598	14	FSM	ENSG00000115947.14	ENST00000264169.6	6598	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_13	122.948009409471	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	NA	False	NA	0	True	TATAAA	-17	NA	148021604	147930396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148021447
transcript_81447.known	chr2	-	6472	13	FSM	ENSG00000115947.14	ENST00000540442.5	6472	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	123.115460713375	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-18	True	NA	0	True	TATAAA	-17	NA	148020737	147930396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_148020632
transcript_81453.known	chr2	-	6328	11	FSM	ENSG00000115947.14	ENST00000536575.5	6328	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	136.431667878099	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	0	True	NA	0	True	TATAAA	-17	NA	148020761	147930396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_148020632
transcript_81464.known	chr2	-	552	6	FSM	ENSG00000115947.14	ENST00000440042.1	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	156.07357239456	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTAAGTATCATTTCA	1	True	NA	NA	False	GATAAA	-2	NA	148020760	147958302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020607
transcript_81466.nic	chr2	+	1257	11	ISM	ENSG00000168280.18	ENST00000676875.1	3315	14	211	20837	211	0	5prime_fragment	FALSE	canonical	3	160	junction_8	16.2098735343617	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATCTGGAGATGGA	205	False	NA	62	True	AAAAAG	-33	NA	148875437	148962079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970
transcript_8147.known	chr1	+	817	3	FSM	ENSG00000224699.10	ENST00000457535.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	0.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTGCAGTGTCATTA	116	False	NA	4	True	TATAAA	-29	NA	110407524	110416274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110407955_110412172_110412294_110416008
transcript_81480.nnic	chr2	+	1393	8	NIC	ENSG00000150556.17	novel	1345	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	16.9006701956231	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	-1	True	NA	NA	False	AATAAA	-24	NA	149038727	149215262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_149038802_149077519_149077597_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_81482.known	chr2	+	1345	7	FSM	ENSG00000150556.17	ENST00000409642.8	1345	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	15.7762127549323	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	-6	True	NA	NA	False	AATAAA	-24	NA	149038698	149215262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_149038802_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_81485.nnic	chr2	+	1318	7	NIC	ENSG00000150556.17	novel	1345	7	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.4714052096561	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	10	True	NA	NA	False	AATAAA	-24	NA	149038714	149215262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_149038802_149119102_149119164_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_81487.nnic	chr2	+	1321	7	NIC	ENSG00000150556.17	novel	1306	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	15.3559615640166	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	-1	True	NA	NA	False	AATAAA	-24	NA	149038727	149215262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_149038802_149077519_149077597_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_8149.known	chr1	+	574	3	FSM	ENSG00000224699.10	ENST00000590826.3	574	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCTTGCAGTGTCAT	1157	False	NA	2	True	TATAAA	-27	NA	110408969	110416272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110409159_110412172_110412294_110416008
transcript_81491.known	chr2	+	1248	6	FSM	ENSG00000150556.17	ENST00000409876.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.733126291999	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	13	False	NA	NA	False	AATAAA	-18	NA	149038717	149215256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_149038802_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_81494.nnic	chr2	+	1250	6	NIC	ENSG00000150556.17	novel	1306	7	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.0820352836731	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	-1	True	NA	NA	False	AATAAA	-24	NA	149038727	149215262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_149038802_149077519_149077597_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_81497.nnic	chr2	+	1224	6	NIC	ENSG00000150556.17	novel	1345	7	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	18.4542677990756	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	9	False	NA	NA	False	AATAAA	-24	NA	149038748	149215262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_149038802_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_815.known	chr1	-	876	2	FSM	ENSG00000235098.9	ENST00000442470.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAAGGAGTGTGAGGGC	13	True	NA	NA	False	NA	NA	NA	1421260	1419137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1419550_1420796
transcript_81500.known	chr2	+	1306	7	FSM	ENSG00000150556.17	ENST00000409029.5	1306	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	16.9942800834738	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	NA	False	NA	NA	False	AATAAA	-24	NA	149077521	149215262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_149077597_149119102_149119164_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_81501.known	chr2	+	4011	5	FSM	ENSG00000187123.15	ENST00000334166.9	4011	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	8.57321409974112	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAAAATGTCAGTTTG	30	True	NA	11	True	AGTAAA	-21	NA	149330586	149474138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_149330723_149437637_149437827_149449048_149449148_149468644_149468776_149470682
transcript_81506.known	chr2	+	1022	3	FSM	ENSG00000231969.3	ENST00000687950.1	2498	3	0	1476	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCAGTTGTAGAGTCCC	3192	False	NA	NA	False	ATTAAA	-18	NA	149587195	149848233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_149587851_149743717_149743760_149847908
transcript_81509.known	chr2	-	1392	8	FSM	ENSG00000168288.13	ENST00000303319.10	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	1023	junction_1	37.4318428232282	8745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTGTTTTCATTACA	16	False	149587791	-36	True	AATAAA	-19	NA	149587775	149569636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_149570169_149571084_149571172_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088_149587150_149587663
transcript_81510.known	chr2	-	1462	9	FSM	ENSG00000168288.13	ENST00000422782.2	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	474.67803232823	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTCCCAAAATAAATCA	13	False	149587791	-71	True	AAAAAG	-18	NA	149587778	149569671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_149570169_149571084_149571172_149572229_149572332_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088_149587150_149587663
transcript_81511.known	chr2	-	2684	6	FSM	ENSG00000115963.14	ENST00000263895.9	2684	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	36.201657420621	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-2	True	NA	-4	True	AATAAA	-25	NA	150487667	150468194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487548
transcript_81514.known	chr2	-	2777	5	FSM	ENSG00000115963.14	ENST00000375734.6	2777	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	10.7558123821495	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-2	True	NA	-4	True	AATAAA	-25	NA	150487667	150468194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267
transcript_81516.nnic	chr2	-	2676	4	NIC	ENSG00000115963.14	novel	2372	4	NA	NA	-1	0	intron_retention	FALSE	canonical	2	5	junction_3	60.337937209244	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTGTCTAAATGTGAT	-3	True	NA	-18	True	AATAAA	-11	NA	150487668	150468208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_150470239_150471626_150471762_150474874_150474985_150487267
transcript_81517.known	chr2	-	4176	4	FSM	ENSG00000184898.7	ENST00000331426.6	4176	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATGTGTTTAAATGTG	-9	True	NA	NA	False	AATAAA	-17	NA	151261863	151247939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151251665_151252754_151252856_151255532_151255744_151261724
transcript_81518.known	chr2	-	579	2	FSM	ENSG00000184898.7	ENST00000409092.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCAATGAATCTTCTG	21	True	NA	NA	False	AATAAA	-33	NA	151261778	151260984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151261510_151261724
transcript_81519.known	chr2	-	1229	8	FSM	ENSG00000123609.11	ENST00000243346.10	1229	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	12.969351627304	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGTATTGGTGCCA	8427	False	151289688	-4	True	AATAAA	-15	NA	151289668	151270469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151270876_151271625_151271733_151275483_151275671_151275757_151275865_151278827_151278991_151281947_151282044_151282867_151282955_151289592
transcript_81520.known	chr2	+	1422	6	FSM	ENSG00000123610.5	ENST00000243347.5	1422	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.96647939483827	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTGCACCTCTCTA	-1	True	NA	15	True	AATAAA	-15	NA	151357591	151380046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_151357761_151363942_151364081_151366055_151366218_151370019_151370249_151373548_151373590_151379363
transcript_81526.nic	chr2	-	1042	10	ISM	ENSG00000183091.21	ENST00000409198.5	20637	150	-17	232080	-17	-28218	5prime_fragment	FALSE	canonical	0	0	junction_2	1.06574033851394	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAATAGAGCTGGGA	NA	False	NA	NA	False	AAGAAA	-22	NA	151734504	151717415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_151717521_151723381_151723487_151724259_151724365_151724856_151724962_151725452_151725561_151727690_151727907_151729614_151729657_151733120_151733186_151733711_151733796_151734397
transcript_81538.known	chr2	+	743	7	FSM	ENSG00000080345.18	ENST00000494333.1	743	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	45.7872495594813	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTCTTTTATGTAA	-24	True	NA	NA	False	AAGAAA	-33	NA	151409899	151420379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_8154.known	chr1	-	553	3	FSM	ENSG00000134248.14	ENST00000602858.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	2266	junction_2	35.5	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATCTTTTCTAGAT	1531	False	NA	-35	True	AATAAA	-13	NA	110406425	110401256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110401584_110403918_110404037_110406317
transcript_81544.known	chr2	+	2534	21	FSM	ENSG00000080345.18	ENST00000414861.6	2534	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	40.7777819406598	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGCAACTTTAACAAGA	32	True	NA	NA	False	NA	NA	NA	151409955	151455110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_151410034_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894
transcript_81545.known	chr2	+	3552	14	FSM	ENSG00000080345.18	ENST00000454583.6	3552	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	116.767710540423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTGGTTCTCCCGGA	1812	False	NA	NA	False	AATAAA	-17	NA	151464699	151508013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_151466121_151467999_151468147_151468473_151468552_151468640_151468757_151469710_151469865_151473963_151474073_151474856_151475220_151480097_151480228_151483198_151483336_151495228_151495327_151499344_151499541_151503033_151503186_151506209_151506376_151507728
transcript_8155.known	chr1	+	1393	3	FSM	ENSG00000143125.6	ENST00000271331.4	1393	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGGTGTGGTATTCC	-1	True	NA	NA	False	AATAAA	-18	NA	110451148	110457358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110451289_110453960_110454087_110456231
transcript_81550.known	chr2	-	5264	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_5	38.2549343222544	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATGGCTTGTCTTAACT	9	True	NA	0	True	AATAAA	-22	NA	151828421	151798796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_81553.known	chr2	-	696	2	FSM	ENSG00000162980.17	ENST00000487723.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTAGACACAGTTTTTG	20	True	NA	NA	False	NA	NA	NA	151828465	151827479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151827841_151828130
transcript_81554.known	chr2	-	747	6	FSM	ENSG00000162980.17	ENST00000428992.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	233.882363593324	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCTCATTAGTTTT	17	True	NA	NA	False	AAAACA	-23	NA	151828468	151803102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_81556.known	chr2	-	5472	14	FSM	ENSG00000115145.10	ENST00000263904.5	5472	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	5.94053371578702	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTATCTGTAATTT	-15	True	NA	-1	True	AATAAA	-17	NA	152175763	152116800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152120803_152123765_152123936_152126225_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_81559.known	chr2	+	5630	26	FSM	ENSG00000157827.20	ENST00000288670.14	5630	26	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_19	21.8805484391959	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTAATATGTTGTAATC	0	True	NA	28	True	AATAAA	-16	NA	152335173	152649826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135_152575245_152578887_152578965_152580955_152581050_152607338_152607414_152611494_152611606_152614850_152615001_152617090_152617193_152618845_152619159_152619508_152619719_152625437_152625563_152626524_152626728_152628298_152628534_152629655_152629725_152629824_152629906_152632007_152632138_152636426_152636591_152637572_152637675_152639957_152640057_152640790_152640915_152647795
transcript_8156.known	chr1	+	1569	9	FSM	ENSG00000143119.14	ENST00000648608.1	1569	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.11763429326218	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACATTGCTATATATC	-7	True	NA	17	True	AATAAA	-20	NA	110871187	110899922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110871260_110873155_110873249_110891391_110891472_110892344_110892534_110894326_110894402_110894959_110895056_110896652_110896734_110897808_110897893_110899123
transcript_81560.nic	chr2	+	932	7	ISM	ENSG00000157827.20	ENST00000288670.14	5630	26	420	74365	420	-32192	5prime_fragment	FALSE	canonical	3	65	junction_1	6.04611904907235	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTCAGATTTTGTTCTC	396	False	NA	NA	False	AAAAAG	-30	NA	152335593	152575461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_152335721_152521942_152522027_152542738_152542820_152549020_152549098_152558739_152558824_152560882_152561036_152575135
transcript_81584.known	chr2	+	465	5	FSM	ENSG00000177917.12	ENST00000425034.6	1681	5	405	811	1	78	multi-exon	FALSE	canonical	2	8	junction_1	341.555632364627	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGATATTGTTGGCAAAAC	16	False	NA	NA	False	NA	NA	NA	152718958	152759851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_152719025_152719897_152720005_152720532_152720587_152734993_152735127_152759746
transcript_81589.known	chr2	+	1308	4	FSM	ENSG00000177917.12	ENST00000686839.1	1308	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	314.859051358258	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATGTGAGAATGATT	237	False	NA	9	True	AATAAA	-15	NA	152717892	152760764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_152717996_152720532_152720587_152734993_152735127_152759746
transcript_8159.nnic	chr1	-	935	3	Antisense	novelGene_ENSG00000143119.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTGCATAAGTGTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	110927720	110877036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_110877686_110890725_110890845_110927553
transcript_81592.known	chr2	-	496	4	FSM	ENSG00000196504.19	ENST00000450303.6	496	4	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	509.380669702597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTGCCTCTGTAGTAC	70	False	NA	-49	True	NA	NA	NA	152717932	152694436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152694623_152715994_152716127_152717355_152717432_152717830
transcript_81597.known	chr2	-	8048	26	FSM	ENSG00000196504.19	ENST00000410080.8	8048	26	0	0	0	0	multi-exon	TRUE	canonical	3	924	junction_9	91.5549583583543	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAAC	21	True	NA	NA	False	GATAAA	-5	NA	152717981	152651592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355
transcript_81598.known	chr2	-	1408	13	FSM	ENSG00000196504.19	ENST00000545856.7	1408	13	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_12	224.234670602028	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAGAAGAA	2	True	NA	-104	True	TATAAA	-11	NA	152717457	152672564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229
transcript_81599.known	chr2	+	3242	4	FSM	ENSG00000177917.12	ENST00000326446.10	3242	4	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_2	46.7071253189014	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCTTTTGTCATTTGC	1	True	NA	16	True	AATAAA	-28	NA	152718619	152762396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_152719025_152720532_152720587_152734993_152735127_152759746
transcript_81600.known	chr2	-	1121	9	FSM	ENSG00000196504.19	ENST00000493468.7	1121	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	404.497527804559	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTAGTAACTTGTCT	2	True	NA	NA	False	AAGAAA	-26	NA	152717457	152676404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152676780_152677450_152677476_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229
transcript_81601.known	chr2	-	78	1	FSM	ENSG00000226338.1	ENST00000443733.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	153208163	153208085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_153208100_153208200
transcript_81603.nnic	chr2	-	1692	2	FSM	ENSG00000227400.2	ENST00000424322.1	586	2	230	-1336	230	1145	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGGAGATCATATTTGC	168	False	NA	-21	True	AATAAA	-20	NA	153593058	153420470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_153421964_153592859
transcript_81605.nnic	chr2	+	798	3	Antisense	novelGene_ENSG00000177519.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTCTTGCCATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	153477832	153480180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_153477963_153478273_153478363_153479601
transcript_81607.nnic	chr2	+	959	3	Antisense	novelGene_ENSG00000177519.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTCTTGCCATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	153477851	153480180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_153478143_153478273_153478363_153479601
transcript_81609.known	chr2	-	1425	1	FSM	ENSG00000177519.4	ENST00000325926.4	1425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	999	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTGGCCTCCTGGTGG	1	True	NA	-11	True	AATAAA	-19	NA	153478762	153477337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_153477300_153478800
transcript_8161.nnic	chr1	-	815	2	Antisense	novelGene_ENSG00000143119.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATTGCATAAGTGTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	110927720	110877037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_110877686_110927553
transcript_81611.known	chr2	+	5657	13	FSM	ENSG00000144278.15	ENST00000392825.8	5657	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_11	21.4130995732363	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGCTTCATTAAGCTA	1	True	NA	NA	False	ATTAAA	-17	NA	153871921	154453979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_153872304_153900935_153901008_153944393_153944640_154140336_154140506_154242029_154242197_154242697_154242906_154245811_154245983_154259020_154259139_154301408_154301590_154395990_154396131_154408983_154409083_154438591_154438727_154450410
transcript_81624.nnic	chr2	+	834	3	Antisense	novelGene_ENSG00000153234.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAATAAAAGAAAAGGAAAGA	-6	True	NA	NA	False	AATAAA	-9	NA	156341812	156367425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_156341921_156360991_156361093_156366800
transcript_81630.known	chr2	+	6041	17	FSM	ENSG00000115159.16	ENST00000310454.10	6041	17	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_1	41.7567359835512	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTCTTTTTTCCTTT	157	False	NA	13	True	NA	NA	NA	156435440	156586403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_156435805_156476097_156476208_156496043_156496216_156510795_156510921_156512219_156512318_156513332_156513497_156549607_156549773_156550601_156550747_156557388_156557583_156568824_156568960_156569362_156569539_156570086_156570219_156571133_156571293_156578888_156579002_156579085_156579165_156579689_156579789_156582792
transcript_81631.known	chr2	+	5812	17	FSM	ENSG00000115159.16	ENST00000438166.7	5812	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	32.7270912242442	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAATTCTTTTTTCCTTT	6	True	NA	13	True	NA	NA	NA	156436378	156586403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_156436514_156476097_156476208_156496043_156496216_156510795_156510921_156512219_156512318_156513332_156513497_156549607_156549773_156550601_156550747_156557388_156557583_156568824_156568960_156569362_156569539_156570086_156570219_156571133_156571293_156578888_156579002_156579085_156579165_156579689_156579789_156582792
transcript_81649.nnic	chr2	+	2135	2	NNC	ENSG00000287048.1	novel	1624	2	NA	NA	-65868	5	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGTGTCTTTAAATTA	NA	False	NA	9	True	ATTAAA	-20	NA	156722862	156865706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_156723414_156864122
transcript_8165.known	chr1	-	3313	4	FSM	ENSG00000121931.16	ENST00000369763.5	3313	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	15.4560308258262	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	-9	True	NA	-16	True	NA	NA	NA	110963922	110947189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110948400_110949850_110950124_110951287_110952816_110963620
transcript_81650.nnic	chr2	-	691	2	Genic_Genomic	ENSG00000230562.3	novel	691	1	NA	NA	-94	-55	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAACACAGTAAGAAGAA	NA	False	NA	NA	False	AATATA	-36	NA	157380508	157379778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_157380068_157380106
transcript_81651.nnic	chr2	-	540	2	Genic_Genomic	ENSG00000230562.3	novel	691	1	NA	NA	-94	-206	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTCAAAAGATGGAACTG	NA	False	NA	NA	False	AAAAAG	-6	NA	157380508	157379929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_157380068_157380106
transcript_81658.known	chr2	-	3332	11	FSM	ENSG00000115170.16	ENST00000434821.7	3332	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	12.4261820363296	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	-4	True	NA	-5	True	AATAAA	-17	NA	157876330	157736445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875795
transcript_81659.known	chr2	-	3130	14	FSM	ENSG00000153237.18	ENST00000283233.10	3130	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	1.85893014978378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGGGCAATATCTTTA	1380	False	NA	NA	False	AATAAA	-43	NA	158456753	158171072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_158172260_158176520_158176662_158178878_158178997_158220594_158220714_158250771_158250913_158309432_158309640_158313755_158313895_158338725_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158345214_158345319_158358448_158358571_158456414
transcript_81661.known	chr2	-	1786	12	FSM	ENSG00000153237.18	ENST00000448656.5	1786	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	2.04898684901539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGATTCTTAGAATTT	1567	False	NA	NA	False	ATTAAA	-16	NA	158456566	158171973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_158172260_158176520_158176662_158178878_158178997_158220594_158220714_158250771_158250913_158309432_158309640_158313755_158313895_158338725_158338908_158338989_158339086_158340597_158340681_158358448_158358571_158456414
transcript_81670.known	chr2	-	1447	8	FSM	ENSG00000153237.18	ENST00000417066.5	1447	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.28881840949181	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGAGGTGGCCTCAGATG	1380	False	NA	NA	False	NA	NA	NA	158456753	158288587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_158288837_158309432_158309640_158313755_158313895_158338725_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158456414
transcript_81679.known	chr2	-	1160	7	FSM	ENSG00000153237.18	ENST00000409889.1	1160	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	2.08166599946613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	1431	False	NA	NA	False	AATAAA	-14	NA	158456702	158338592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158345214_158345319_158358448_158358571_158456414
transcript_8168.nnic	chr1	-	1256	3	NNC	ENSG00000121931.16	novel	3313	4	NA	NA	13	70155	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCATAAGTGTTAATTT	3	True	NA	NA	False	AATAAA	-20	NA	110963952	110877034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_110877686_110949850_110950124_110963620
transcript_81680.nnic	chr2	-	1095	6	NIC	ENSG00000153237.18	novel	1786	12	NA	NA	9	37816	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	3.87814388593306	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAAATCTATTGTCAAT	1389	False	NA	NA	False	AAGAAA	-7	NA	158456744	158250771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_158250913_158309432_158309640_158313755_158313895_158338725_158338908_158338989_158339086_158456414
transcript_81684.nic	chr2	-	1107	6	NIC	ENSG00000153237.18	novel	1160	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	2.33238075793812	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	1380	False	NA	NA	False	AATAAA	-14	NA	158456753	158338592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158358448_158358571_158456414
transcript_8169.known	chr1	-	1796	3	FSM	ENSG00000121931.16	ENST00000485275.2	1796	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	17.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAATATTTCTTAAAC	-10	True	NA	-48	True	AAAAAG	-20	NA	110963965	110947221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110948400_110949850_110950124_110963620
transcript_81690.nic	chr2	-	818	4	NIC	ENSG00000153237.18	novel	1160	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	4.08248290463863	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	1395	False	NA	NA	False	AATAAA	-14	NA	158456738	158338592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_158338908_158338989_158339086_158340597_158340681_158456414
transcript_81693.nnic	chr2	-	741	3	NIC	ENSG00000153237.18	novel	1160	7	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	1389	False	NA	NA	False	AATAAA	-14	NA	158456744	158338592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_158338908_158338989_158339086_158456414
transcript_81695.known	chr2	+	452	3	FSM	ENSG00000144283.23	ENST00000483881.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACAGCTGAGCCCTAGT	NA	False	NA	3	True	AATAAA	-19	NA	158663057	158666659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_158663089_158663271_158663446_158666412
transcript_81696.known	chr2	+	549	4	FSM	ENSG00000163331.12	ENST00000309950.8	549	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCCCTGTGCCTCTTTT	0	True	NA	NA	False	AATAAA	-23	NA	158795316	158815990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_158795431_158804281_158804370_158807054_158807116_158815704
transcript_817.known	chr1	+	4314	14	FSM	ENSG00000160072.20	ENST00000472194.6	4314	14	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_12	134.780997027635	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACTGTTTAAAAAAAAAAA	177	False	NA	NA	False	NA	NA	NA	1478025	1497848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
transcript_81701.known	chr2	-	1920	11	FSM	ENSG00000196151.11	ENST00000409990.7	1920	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	17.9913868281464	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCAGTGTCCTAAGTT	149	False	NA	-8	True	AATAAA	-11	NA	159286592	159235800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286359
transcript_81702.nnic	chr2	-	1778	11	NNC	ENSG00000196151.11	novel	1811	11	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_10	18.2701943065748	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	4	True	NA	-5	True	AATAAA	-14	NA	159286623	159235797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286535
transcript_81703.known	chr2	-	1811	11	FSM	ENSG00000196151.11	ENST00000359774.9	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	6.70522184569608	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-18	True	NA	-5	True	AATAAA	-14	NA	159286703	159235797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_81708.known	chr2	-	1600	10	FSM	ENSG00000196151.11	ENST00000409124.1	1600	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.9009621094634	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTCAGCTATATAGAAAT	16	True	NA	-41	True	TATAAA	-25	NA	159286669	159235833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159236191_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_8172.nic	chr1	-	1032	2	ISM	ENSG00000121931.16	ENST00000485275.2	1796	3	13	2202	13	-2202	5prime_fragment	FALSE	canonical	3	71	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACCAGGCCAGGTGCAGTG	3	True	NA	NA	False	NA	NA	NA	110963952	110949423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_110950124_110963620
transcript_81721.known	chr2	-	1535	7	FSM	ENSG00000196151.11	ENST00000358147.8	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	21.4916004264198	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-18	True	NA	-5	True	AATAAA	-14	NA	159286703	159235797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_8173.nic	chr1	-	624	2	ISM	ENSG00000121931.16	ENST00000485275.2	1796	3	-6	2629	-6	-2629	5prime_fragment	FALSE	canonical	3	71	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTAATACATTTTAATG	NA	False	NA	0	True	AAAACA	-2	NA	110963971	110949850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_110950124_110963620
transcript_81743.known	chr2	-	454	2	FSM	ENSG00000123636.19	ENST00000552327.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGATTGTAATGAATTAT	1184	False	NA	NA	False	AGTAAA	-5	NA	159615424	159555442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159555866_159615393
transcript_81744.known	chr2	-	640	5	FSM	ENSG00000123636.19	ENST00000437839.5	640	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	14.3766303423299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGAATCATGATTCTT	-4	True	NA	NA	False	NA	NA	NA	159615560	159448315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159448410_159453612_159453802_159478574_159478722_159555822_159555866_159615393
transcript_81746.known	chr2	+	1494	2	FSM	ENSG00000224152.2	ENST00000686508.1	3051	2	2	1555	2	1	multi-exon	FALSE	canonical	3	13	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTCGTTTTAAAGTT	-8	True	NA	11	True	AATAAA	-19	NA	159615295	159617082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_159615454_159615746
transcript_81749.nic	chr2	-	506	3	NIC	ENSG00000226266.7	novel	2520	3	NA	NA	0	-1990	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTACAATCATTATTGT	1091	False	NA	NA	False	AATAAA	-25	NA	159712018	159695190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_159695421_159710716_159710895_159711920
transcript_81750.known	chr2	-	2520	3	FSM	ENSG00000226266.7	ENST00000607836.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	6.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAAAATT	2	True	NA	NA	False	NA	NA	NA	159712435	159693200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159695421_159710716_159710895_159712313
transcript_81752.nic	chr2	-	780	2	ISM	ENSG00000226266.7	ENST00000418770.5	375	3	0	39501	0	406	5prime_fragment	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTGCTAGGAATTAT	1091	False	NA	NA	False	NA	NA	NA	159712018	159710212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_159710895_159711920
transcript_81753.nic	chr2	-	1150	2	FSM	ENSG00000226266.7	ENST00000693353.1	407	2	-337	-406	-337	406	multi-exon	FALSE	canonical	3	21	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTGCTAGGAATTAT	328	False	NA	NA	False	NA	NA	NA	159712781	159710212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159710895_159712313
transcript_81754.known	chr2	-	375	3	FSM	ENSG00000226266.7	ENST00000418770.5	375	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGTAAATATCTGGATAA	1091	False	NA	NA	False	AATGAA	-11	NA	159712018	159670711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159670811_159710716_159710895_159711920
transcript_81756.known	chr2	+	6043	12	FSM	ENSG00000136536.15	ENST00000409175.6	6043	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	344.791492867384	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	-5	True	NA	15	True	AATAAA	-27	NA	159712505	159771027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_159712607_159714556_159714599_159715680_159715767_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_81767.known	chr2	+	5922	10	FSM	ENSG00000136536.15	ENST00000259050.8	5922	10	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	167.435633477539	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	-12	True	NA	15	True	AATAAA	-27	NA	159712498	159771027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_81770.nic	chr2	+	3761	10	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	-196	-10	combination_of_known_junctions	FALSE	canonical	3	382	junction_1	146.286966416048	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTTTGAAATGTTT	-6	True	NA	19	True	AATAAA	-16	NA	159712260	159768573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_81772.nic	chr2	+	3315	9	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	-15	-10	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	283.754295121677	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTTTGAAATGTTT	-27	True	NA	19	True	AATAAA	-16	NA	159712483	159768573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_159712607_159729008_159729176_159743060_159743254_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_81780.known	chr2	-	3932	6	FSM	ENSG00000241399.7	ENST00000259053.6	3932	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	1.72046505340853	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTCTTCTTTGAGC	6	True	NA	NA	False	AATAAA	-16	NA	159798208	159768627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159772054_159777937_159777965_159780004_159780179_159780881_159780999_159783358_159783470_159798131
transcript_81784.nic	chr2	+	728	5	ISM	ENSG00000136536.15	ENST00000259050.8	5922	10	-40	23171	2	-270	5prime_fragment	FALSE	canonical	3	304	junction_1	231.103196646001	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGCACTTTACAGT	192	False	NA	NA	False	AAGAAA	-2	NA	159712458	159747856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804
transcript_81785.nic	chr2	+	771	5	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	14	-270	combination_of_known_junctions	FALSE	canonical	3	382	junction_1	199.053227806032	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGCACTTTACAGT	-40	True	NA	NA	False	AAGAAA	-2	NA	159712470	159747856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804
transcript_81789.known	chr2	+	821	4	FSM	ENSG00000136536.15	ENST00000473749.1	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	364.706274509593	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGATTGCTGTCACGCA	12	True	NA	NA	False	AATGAA	-15	NA	159712522	159748126	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_159712662_159729008_159729176_159743060_159743254_159747804
transcript_81793.nic	chr2	+	800	2	ISM	ENSG00000136536.15	ENST00000539065.5	3303	8	27	38898	-15	-13526	5prime_fragment	FALSE	canonical	3	304	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTCCAAAGACTTGGAA	-27	True	NA	NA	False	NA	NA	NA	159712483	159729685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_159712607_159729008
transcript_81794.nic	chr2	+	838	2	ISM	ENSG00000136536.15	ENST00000473749.1	821	4	-22	18441	2	-13526	5prime_fragment	FALSE	canonical	3	382	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTCCAAAGACTTGGAA	-10	True	NA	NA	False	NA	NA	NA	159712500	159729685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_159712662_159729008
transcript_81795.known	chr2	+	3303	8	FSM	ENSG00000136536.15	ENST00000539065.5	3303	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	352.247883497646	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAATGTTTCCTTTTAAAC	190	False	NA	29	True	AATAAA	-26	NA	159712456	159768583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159767283
transcript_81796.known	chr2	-	1402	2	FSM	ENSG00000054219.11	ENST00000492955.1	1402	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTTAGCCATTTTC	-33	True	NA	NA	False	ACTAAA	-22	NA	159904749	159902364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159903606_159904588
transcript_81797.nnic	chr2	+	703	2	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATCCTATTAGTCC	545	False	NA	NA	False	AATAAA	-15	NA	159904836	159906331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_159904928_159905719
transcript_81815.known	chr2	-	4286	14	FSM	ENSG00000153250.21	ENST00000348849.8	4286	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_13	94.3653983320521	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGTCAATTTTTTT	33	True	NA	-11	True	AATAAA	-18	NA	160493807	160272150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286968_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160493288
transcript_81817.known	chr2	-	1815	14	FSM	ENSG00000153250.21	ENST00000409972.5	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_13	98.5064200593008	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAACAAAAGATTTTTAT	6	True	NA	NA	False	AGTAAA	-18	NA	160407889	160274519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160407463
transcript_81823.known	chr2	-	1550	14	FSM	ENSG00000153250.21	ENST00000409075.5	1550	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	123.323455012471	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCAATTTT	NA	False	NA	NA	False	AAAAAG	-18	NA	160408609	160274459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160408508
transcript_81825.known	chr2	+	2098	8	FSM	ENSG00000136560.14	ENST00000392749.7	2098	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	23.3019224922909	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGAAGGAATCACATT	3	True	NA	67	True	AGTAAA	-17	NA	161160427	161236230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_81828.known	chr2	+	533	5	FSM	ENSG00000136560.14	ENST00000441987.5	533	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	58.9634420637059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAAACTACCAAAGG	3	True	NA	NA	False	GATAAA	-18	NA	161160427	161204774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160487_161179613_161179762_161202862_161202980_161203486_161203596_161204674
transcript_8183.known	chr1	+	2251	9	FSM	ENSG00000134255.15	ENST00000545121.5	2251	9	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	40.7760652834478	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTGATGTGTCTTG	154	False	NA	9	True	AATAAA	-21	NA	111139626	111185102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111139762_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_81830.nic	chr2	+	751	5	ISM	ENSG00000136560.14	ENST00000406287.5	875	8	77	30402	-1	0	5prime_fragment	FALSE	canonical	3	16	junction_2	64.9706664580255	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	1	True	NA	NA	False	AATAAA	-19	NA	161160425	161204979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_161160487_161161284_161161413_161179613_161179762_161203486_161203596_161204674
transcript_81833.known	chr2	+	550	4	FSM	ENSG00000136560.14	ENST00000440506.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	53.8537113133554	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTACCAAAGGTAGACAT	0	True	NA	NA	False	GATAAA	-25	NA	161160298	161204781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674
transcript_81834.known	chr2	+	636	4	FSM	ENSG00000136560.14	ENST00000494976.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.01387685344754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGGCTTTTTGACATC	7	True	NA	NA	False	NA	NA	NA	161160431	161162890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160487_161161284_161161413_161161812_161161908_161162532
transcript_81836.known	chr2	+	674	3	FSM	ENSG00000136560.14	ENST00000461338.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAAGGGTATTGCTTC	3	True	NA	NA	False	AGTAAA	-43	NA	161160343	161163518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160485_161161284_161161413_161163113
transcript_81837.nic	chr2	+	753	3	ISM	ENSG00000136560.14	ENST00000406287.5	875	8	-17	55298	-12	-2	5prime_fragment	FALSE	canonical	3	16	junction_2	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGTATCACTGTCTCCA	-9	True	NA	NA	False	TATAAA	-37	NA	161160331	161180083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_161160487_161161284_161161413_161179613
transcript_81839.known	chr2	+	566	3	FSM	ENSG00000136560.14	ENST00000483622.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCCATATGTAGCTCT	32	False	NA	NA	False	ATTAAA	-19	NA	161160456	161161666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160485_161160948_161161105_161161284
transcript_81842.known	chr2	+	2385	3	FSM	ENSG00000227403.3	ENST00000655684.2	2441	3	10	46	-9	-1	multi-exon	FALSE	canonical	2	5	junction_1	1	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCATTCTCTATTCAT	NA	False	NA	10	True	ATTAAA	-15	NA	161244729	161249049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161244896_161245423_161245468_161246874
transcript_81845.known	chr2	+	427	2	FSM	ENSG00000136560.14	ENST00000477952.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATGGTGAAAGTCTT	2	True	NA	NA	False	ATTAAA	-4	NA	161160426	161161651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160487_161161284
transcript_81846.known	chr2	+	2333	2	FSM	ENSG00000227403.3	ENST00000439050.1	2333	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCATTCTCTATTCATC	-7	True	NA	11	True	ATTAAA	-16	NA	161244738	161249050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161244896_161246874
transcript_81848.known	chr2	+	555	3	FSM	ENSG00000136560.14	ENST00000403609.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	7.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	7245	False	NA	NA	False	AATAAA	-19	NA	161179620	161204979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161179762_161203486_161203596_161204674
transcript_81849.known	chr2	+	301	2	FSM	ENSG00000136560.14	ENST00000489393.1	301	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATTTGTAAATAATAGAA	7277	False	NA	NA	False	NA	NA	NA	161179652	161197528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161179762_161197336
transcript_8185.known	chr1	+	2203	9	FSM	ENSG00000134255.15	ENST00000357172.9	2203	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_4	16.8281757775464	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGATGTGTCTTGTG	-10	True	NA	11	True	AATAAA	-23	NA	111140222	111185104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111140308_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_81862.known	chr2	+	1567	12	FSM	ENSG00000115233.12	ENST00000409682.8	1567	12	0	0	0	0	multi-exon	FALSE	canonical	3	1580	junction_5	89.2393012778674	15474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTGAGATCTTTTTG	-30	True	NA	14	True	AATAAA	-17	NA	161308424	161411717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161308605_161316436_161316570_161318821_161318874_161367477_161367550_161367783_161367904_161370106_161370178_161371171_161371323_161385463_161385572_161391103_161391179_161395077_161395204_161408836_161408900_161411301
transcript_81863.known	chr2	-	3573	26	FSM	ENSG00000197635.11	ENST00000360534.8	3573	26	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_6	5.02219075703024	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTTGTGTCTTGAA	-5	True	NA	NA	False	AATAAA	-22	NA	162074215	161992244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_161993385_161994960_161995035_161995299_161995373_162005744_162005810_162008561_162008662_162009240_162009296_162011792_162011988_162014395_162014466_162016767_162016867_162017107_162017156_162018728_162018851_162019222_162019277_162020228_162020297_162020580_162020689_162022754_162022800_162024803_162024940_162033540_162033654_162035163_162035325_162038301_162038423_162038948_162039022_162039131_162039185_162045531_162045613_162046914_162047007_162047402_162047502_162073398_162073487_162073975
transcript_81864.known	chr2	-	3749	26	FSM	ENSG00000197635.11	ENST00000676810.1	3749	26	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_24	6.38172390502754	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGACTTGTGTCTTGAA	5	True	NA	NA	False	AATAAA	-22	NA	162074394	161992244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_161993385_161994960_161995035_161995299_161995373_162005744_162005810_162008561_162008662_162009240_162009296_162011792_162011988_162014395_162014466_162016767_162016867_162017107_162017156_162018728_162018851_162019222_162019277_162020228_162020297_162020580_162020689_162022754_162022800_162024803_162024940_162033540_162033654_162035163_162035325_162038301_162038423_162038948_162039022_162039131_162039185_162045531_162045613_162046914_162047007_162047402_162047499_162073398_162073487_162073975
transcript_81874.known	chr2	+	1694	8	FSM	ENSG00000115271.11	ENST00000233612.8	1694	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	138.173508196568	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAGAAATTTTACATT	144	False	NA	11	True	AATAAA	-21	NA	162344337	162361122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_162344526_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_81880.known	chr2	+	3651	8	FSM	ENSG00000115271.11	ENST00000437150.7	3651	8	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_6	48.5024720598689	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCTTTGTCTTTTTAC	-1	True	NA	NA	False	AATAAA	-17	NA	162344131	162363123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_81881.known	chr2	+	1808	7	FSM	ENSG00000115271.11	ENST00000487445.6	1808	7	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_6	46.0341057140126	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCCTGCTCTGAATC	26	False	NA	NA	False	NA	NA	NA	162344158	162360971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359553_162360216
transcript_81882.known	chr2	-	9537	3	FSM	ENSG00000182263.14	ENST00000333129.4	9537	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	16	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTTGATTTTTATCA	17	True	NA	NA	False	AATAAA	-23	NA	163736008	163602610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_163611807_163734902_163735073_163735837
transcript_81884.nnic	chr2	-	1460	3	NNC	ENSG00000182263.14	novel	746	3	NA	NA	-264	-120810	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	56	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAATATGTTGTATGCA	729	False	NA	NA	False	ATTAAA	-20	NA	163736276	163732163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_163733015_163734902_163735073_163735837
transcript_81885.known	chr2	-	600	2	FSM	ENSG00000182263.14	ENST00000482917.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTAGTTATTCAAGTAGT	1021	False	NA	NA	False	NA	NA	NA	163735984	163611353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_163611807_163735837
transcript_81891.known	chr2	-	562	2	FSM	ENSG00000082438.18	ENST00000474975.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATCTGAAAACCT	NA	False	NA	NA	False	AGTAAA	-39	NA	164722491	164721816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_164722312_164722424
transcript_81892.known	chr2	-	1227	3	FSM	ENSG00000288089.1	ENST00000667993.1	1227	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTATAATAAATATATAGT	NA	False	NA	NA	False	AATAAA	-3	NA	165436614	165433437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_165434333_165434865_165435086_165436502
transcript_81893.known	chr2	+	11737	7	FSM	ENSG00000178662.16	ENST00000651982.1	11737	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	7.99478997014097	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCATTTCTGTT	-1	True	NA	11	True	AGTAAA	-19	NA	165469697	165689407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165595042_165595214_165657760_165658021_165676311_165676609_165678700
transcript_81909.known	chr2	+	499	4	FSM	ENSG00000178662.16	ENST00000464503.1	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	2.05480466765633	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTATTTGTGGATTT	7	True	NA	NA	False	AATAAA	-18	NA	165469705	165566981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165566776
transcript_81917.known	chr2	-	3436	11	FSM	ENSG00000115339.14	ENST00000392701.8	3436	11	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	16.0860187740783	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATGATGTTTTAAAAAA	1	True	NA	NA	False	GATAAA	-18	NA	165794247	165747587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757248_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
transcript_81919.nnic	chr2	-	1029	2	NIC	ENSG00000115339.14	novel	1954	8	NA	NA	-170	146	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGAACGTGGGGAAG	-3	True	NA	NA	False	NA	NA	NA	165794829	165770284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_165770809_165794324
transcript_81924.known	chr2	+	779	3	FSM	ENSG00000235192.1	ENST00000425688.1	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCTACATGGTGAAAC	18	True	NA	NA	False	NA	NA	NA	165794850	165810010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_165795080_165801180_165801583_165809862
transcript_81926.known	chr2	-	5415	29	FSM	ENSG00000123607.16	ENST00000243344.8	5415	29	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_21	17.1994230444287	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGCTTTTTATTAAAT	20	True	NA	-3	True	AATAAA	-17	NA	165953776	165873361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_81927.known	chr2	-	1844	11	FSM	ENSG00000123607.16	ENST00000464374.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	19.7101496696499	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGGACCATT	51	False	NA	NA	False	NA	NA	NA	165953745	165928716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_81930.known	chr2	-	651	3	FSM	ENSG00000123607.16	ENST00000476227.1	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGACAGCCAAAGAAAC	-15	True	NA	NA	False	GATAAA	-32	NA	165953811	165949110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_165949505_165949594_165949725_165953684
transcript_81932.known	chr2	-	711	3	FSM	ENSG00000144285.23	ENST00000507401.2	711	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTGTAGCACCAACACAT	1	True	NA	NA	False	NA	NA	NA	166128020	166073301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_166073671_166077709_166077802_166127770
transcript_81937.known	chr2	-	3231	15	FSM	ENSG00000169432.19	ENST00000454569.6	3231	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	3.35334131265871	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTAATATGCTAGATT	16	False	NA	NA	False	AATAAA	-17	NA	166375969	166277715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_166278314_166280356_166280596_166281678_166281809_166284485_166284825_166286335_166286624_166288436_166288644_166293230_166293373_166294598_166294663_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_81941.nnic	chr2	-	1547	8	NNC	ENSG00000169432.19	novel	2283	7	NA	NA	-24	29	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	4.49943307086389	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCTTTCTCACTCACT	NA	False	NA	NA	False	AATAAA	-34	NA	166376025	166302033	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_166302301_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_81944.nic	chr2	-	500	2	ISM	ENSG00000169432.19	ENST00000472119.2	2283	7	-24	9573	-24	-5126	5prime_fragment	FALSE	canonical	2	11	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATGATGAAGAAGCCCCA	NA	False	NA	NA	False	AAGAAA	-30	NA	166376025	166311635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_166311807_166375696
transcript_81945.known	chr2	-	2283	7	FSM	ENSG00000169432.19	ENST00000472119.2	2283	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.22952584681651	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACATCATTTTCTTAT	NA	False	NA	NA	False	AATAAA	-5	NA	166376001	166302062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_81946.known	chr2	+	5094	1	ISM	ENSG00000172318.6	ENST00000392690.4	5850	5	575947	4	575947	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTCACTTCTCTTC	NA	False	NA	12	True	AATAAA	-12	NA	167868947	167874041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_167868900_167874000
transcript_81947.known	chr2	-	3272	18	FSM	ENSG00000198648.11	ENST00000355999.5	3272	18	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_6	30.9638700048095	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTTTTGCATTGTTTCT	-5	True	NA	-2	True	AATAAA	-18	NA	168247595	167954021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_167955571_167964661_167964727_168012633_168012703_168017042_168017096_168063499_168063571_168065318_168065382_168074981_168075012_168075108_168075232_168129540_168129607_168129709_168129759_168138087_168138222_168140288_168140391_168140648_168140759_168161786_168161843_168163738_168163881_168167298_168167408_168181977_168182091_168247227
transcript_81948.known	chr2	+	6804	10	FSM	ENSG00000172292.15	ENST00000305747.11	6804	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	14.869805348797	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGTGCCCTTTACTGT	14	True	NA	19	True	AATAAA	-20	NA	168456271	168775134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_168456619_168547595_168547702_168561191_168561323_168630984_168631043_168691033_168691085_168694958_168695052_168715000_168715130_168717871_168717979_168765591_168765749_168769509
transcript_81949.nnic	chr2	+	1801	10	NNC	ENSG00000172292.15	novel	6851	11	NA	NA	428	-4873	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	68.2234889495139	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTTTTGAATGGTTTT	442	False	NA	11	True	ATTAAA	-17	NA	168456699	168770261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_168456917_168547595_168547702_168561191_168561323_168630984_168631043_168691033_168691085_168694958_168695052_168715000_168715130_168717871_168717979_168765591_168765749_168769509
transcript_81952.known	chr2	+	2075	16	FSM	ENSG00000163072.16	ENST00000317647.12	2075	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.711805216802088	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTGAATGGACAAAAACT	9	True	NA	NA	False	NA	NA	NA	168802636	168865514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_168802674_168811566_168811653_168824633_168824718_168828157_168828221_168828419_168828502_168831471_168831535_168834226_168834326_168842991_168843118_168851083_168851183_168851278_168851405_168855351_168855461_168856689_168856779_168859511_168859638_168860794_168860910_168861959_168862050_168864833
transcript_81962.known	chr2	-	1342	7	FSM	ENSG00000152253.9	ENST00000282074.7	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	23.7954243967663	1739	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	-16	True	NA	-1	True	AATAAA	-23	NA	168890430	168870890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_168871556_168873584_168873684_168876071_168876177_168877237_168877385_168889225_168889292_168889386_168889534_168890317
transcript_81978.known	chr2	-	4200	15	FSM	ENSG00000138399.18	ENST00000453153.7	4200	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	78.4370604305107	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGATATAATCCC	3	True	NA	0	True	AATAAA	-16	NA	169573865	169528507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_8198.known	chr1	+	2110	3	FSM	ENSG00000134255.15	ENST00000480324.5	2110	3	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	54	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTGAAATTATGGGG	182	False	NA	NA	False	NA	NA	NA	111139654	111160970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111139762_111147641_111148054_111159379
transcript_81982.known	chr2	-	2791	14	FSM	ENSG00000138399.18	ENST00000453929.6	2791	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	91.0421581258541	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-23	True	NA	-30	True	AATAAA	-17	NA	169573832	169529754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_81994.known	chr2	-	1850	5	FSM	ENSG00000138399.18	ENST00000445210.1	1850	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	85.0734976358678	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-7	True	NA	-7	True	AGTAAA	-19	NA	169573875	169560529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169572995
transcript_81995.nic	chr2	-	2316	5	ISM	ENSG00000138399.18	ENST00000453929.6	2791	14	-84	29677	-41	839	5prime_fragment	FALSE	canonical	0	0	junction_2	77.9567187611177	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAGAATTTTATA	-12	True	NA	NA	False	AATAAA	-3	NA	169573916	169559431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_81997.nic	chr2	-	1218	5	ISM	ENSG00000138399.18	ENST00000453929.6	2791	14	-84	30775	-41	0	5prime_fragment	FALSE	canonical	0	0	junction_2	77.9567187611177	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-12	True	NA	-7	True	AGTAAA	-19	NA	169573916	169560529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_81998.known	chr2	-	1045	4	FSM	ENSG00000138399.18	ENST00000438035.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_2	66.9444213923427	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-3	True	NA	-7	True	AGTAAA	-19	NA	169573812	169560529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169560786_169563224_169563351_169571652_169572172_169573668
transcript_820.known	chr1	-	1381	4	FSM	ENSG00000205090.9	ENST00000378733.9	1381	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.25967446224258	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCGCCTCTTCTGTCAC	-12	True	NA	0	True	AGTAAA	-18	NA	1540624	1534777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1535508_1535588_1535798_1539683_1539791_1540289
transcript_82004.known	chr2	+	6453	14	FSM	ENSG00000138398.17	ENST00000678499.1	6453	14	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	96.7132649707463	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTATACTATAATAAACAG	49	False	NA	-2	True	ATTAAA	-3	NA	169584646	169641389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_82012.known	chr2	+	6150	11	FSM	ENSG00000138398.17	ENST00000676508.1	6150	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	189.815199602139	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	-15	True	NA	15	True	AATAAA	-16	NA	169584343	169641406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584491_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631774_169631934_169633159_169633248_169636091_169636229_169636412
transcript_82026.known	chr2	+	2615	13	FSM	ENSG00000138398.17	ENST00000409714.7	2615	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	138.773396425812	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTTTAATAAACTCGA	-6	True	NA	-14	True	NA	NA	NA	169584352	169637711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_82027.known	chr2	+	3034	7	FSM	ENSG00000138398.17	ENST00000676557.1	3034	7	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	48.6026976846165	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTCATTGTAAAAAAAGAA	8	True	NA	NA	False	AATAAA	-17	NA	169584366	169611222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670
transcript_82028.known	chr2	+	1507	12	FSM	ENSG00000138398.17	ENST00000462903.6	1507	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	134.698622889265	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGTATTTTATTCTTT	28	False	NA	NA	False	AATAAA	-15	NA	169584386	169633557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584498_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159
transcript_82030.known	chr2	-	2153	9	FSM	ENSG00000154479.13	ENST00000447353.6	2153	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3.07967124868873	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTCTGGCTTATTT	-9	True	NA	NA	False	AATAAA	-16	NA	169694405	169645424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169646183_169649181_169649347_169650328_169650522_169654074_169654215_169662279_169662437_169674575_169674770_169674866_169675041_169681006_169681234_169694260
transcript_82036.nic	chr2	-	874	5	ISM	ENSG00000154479.13	ENST00000447353.6	2153	9	-23	16901	-23	0	5prime_fragment	FALSE	canonical	3	4	junction_2	3.04138126514911	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAAAAGAGAAGAGA	NA	False	NA	NA	False	AATAAA	-43	NA	169694428	169662325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_169662437_169674575_169674770_169674866_169675041_169681006_169681234_169694260
transcript_82039.nic	chr2	-	499	3	ISM	ENSG00000154479.13	ENST00000447353.6	2153	9	-23	29512	-23	0	5prime_fragment	FALSE	canonical	3	5	junction_1	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGGCCATTGAAA	NA	False	NA	NA	False	AATATA	-13	NA	169694428	169674936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_169675041_169681006_169681234_169694260
transcript_8204.known	chr1	-	2098	10	FSM	ENSG00000156171.15	ENST00000484310.6	2098	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_9	41.5392124725482	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGCATCTACAAAAACAGT	-5	True	NA	-11	True	ATTAAA	-24	NA	111140093	111117162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_82040.nnic	chr2	-	687	3	NNC	ENSG00000154479.13	novel	2153	9	NA	NA	-23	-4281	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTGGTTTCCTGTAT	NA	False	NA	NA	False	AATAAA	-18	NA	169694428	169679217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_169679510_169681006_169681234_169694260
transcript_82041.nnic	chr2	-	2661	2	NNC	ENSG00000154479.13	novel	2153	9	NA	NA	-20	-11516	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTAGTTTCAGGTATTC	-29	True	NA	NA	False	AATAAA	-18	NA	169694425	169686452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_169688949_169694260
transcript_82042.known	chr2	+	2087	6	FSM	ENSG00000213160.10	ENST00000272797.8	2087	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	143.531181281281	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCCTTACCTGATAATT	8	True	NA	NA	False	TATAAA	-19	NA	169694490	169749804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169735012_169736228_169741384_169741538_169749421
transcript_82045.known	chr2	+	631	5	FSM	ENSG00000144362.12	ENST00000449906.5	631	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	41.7993720048519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTTTAAGTATTTGGG	4	True	NA	NA	False	NA	NA	NA	169694486	169701118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169697864_169697983_169700945
transcript_82046.nic	chr2	+	1249	5	NIC	ENSG00000144362.12	novel	1252	5	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_3	39.3096680220019	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAAGTGTATCACTT	NA	False	NA	6	True	AATAAA	-17	NA	169694428	169701706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_169694623_169695214_169695248_169697360_169697532_169697892_169697983_169700945
transcript_8205.known	chr1	-	2246	9	FSM	ENSG00000156171.15	ENST00000286692.8	2246	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	30.7194970661956	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	160	False	NA	-8	True	AATAAA	-13	NA	111140040	111117332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500
transcript_82050.nnic	chr2	+	1065	4	NNC	ENSG00000144362.12	novel	1121	4	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	45.4386032649185	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGTGTATCACTTAA	NA	False	NA	8	True	AATAAA	-19	NA	169694424	169701708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_169694523_169695214_169695248_169697360_169697532_169700945
transcript_82052.nic	chr2	+	810	4	ISM	ENSG00000213160.10	ENST00000498202.6	843	6	-59	51378	-59	-51196	5prime_fragment	FALSE	canonical	2	9	junction_3	38.3173879879908	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTACTTAGTGTTATAT	NA	False	NA	6	True	ATTAAA	-17	NA	169694428	169698304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_169694623_169695214_169695248_169697360_169697532_169697892
transcript_82053.known	chr2	+	1121	4	FSM	ENSG00000144362.12	ENST00000359744.8	1121	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	9.41629792788369	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGTGTATCACTTAA	-14	True	NA	8	True	AATAAA	-19	NA	169694468	169701708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169700945
transcript_82057.known	chr2	+	908	4	FSM	ENSG00000144362.12	ENST00000438710.5	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	32.3144274623924	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTATCATACTCATT	-12	True	NA	NA	False	NA	NA	NA	169694470	169701378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169694742_169695214_169695248_169697360_169697532_169700945
transcript_8206.known	chr1	-	769	6	FSM	ENSG00000156171.15	ENST00000490780.5	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	94.0816666519041	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-2	True	NA	NA	False	AATAAA	-25	NA	111140090	111125377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_82060.known	chr2	+	4081	4	FSM	ENSG00000213160.10	ENST00000392647.7	4081	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	31.5066130624456	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAGACTGCTTGAAT	-23	True	NA	13	True	AATAAA	-15	NA	169733831	169751878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169734088_169735012_169736228_169741384_169741538_169749421
transcript_8207.known	chr1	+	1966	9	NNC	ENSG00000134255.15	novel	2251	9	NA	NA	4195	-112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	44.4374560477982	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTTCTCAGTTTTACT	1941	False	NA	13	True	AATAAA	-18	NA	111147676	111184988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182298_111182298_111182319_111182798_111182958_111183461_111183588_111184190
transcript_8208.known	chr1	+	2293	6	FSM	ENSG00000173947.14	ENST00000369738.9	2293	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	3.2	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAACATACTGTGCCA	3	True	NA	NA	False	AATAAA	-18	NA	111346621	111353013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111346672_111346909_111347050_111347673_111347773_111348515_111348647_111350105_111350224_111351258
transcript_82080.known	chr2	+	1782	12	FSM	ENSG00000138385.16	ENST00000409333.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	898.630105280088	2051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	364	False	NA	39	True	AATAAA	-28	NA	169799278	169812064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169799517_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_82090.known	chr2	-	800	8	FSM	ENSG00000138382.15	ENST00000392640.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_7	340.293750654775	2396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-33	False	NA	-18	True	AATAAA	-17	NA	169824931	169811756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824867
transcript_821.known	chr1	-	796	2	FSM	ENSG00000205090.9	ENST00000624426.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCATGTGTGTGGCGTCT	6507	False	NA	-5	True	AATAAA	-16	NA	1540350	1539055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1539791_1540289
transcript_82105.known	chr2	-	629	6	FSM	ENSG00000138382.15	ENST00000308099.7	629	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	539.054208776817	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAACTACTGGTCTCCAG	-3	True	NA	-24	True	AATAAA	-11	NA	169824901	169811762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169821091_169821274_169821942_169822058_169824488_169824641_169824867
transcript_82107.known	chr2	+	545	5	FSM	ENSG00000138385.16	ENST00000417292.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1256.1795253864	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCAGAAGTACAAAGAAAC	10	True	NA	-39	True	AAGAAA	-16	NA	169798878	169807030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169798977_169805473_169805578_169805664_169805840_169806784_169806893_169806970
transcript_8211.known	chr1	+	746	5	FSM	ENSG00000173947.14	ENST00000369737.4	746	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	21.6852484422014	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTTGGGTGATTTCA	1	True	NA	68	True	NA	NA	NA	111346619	111351563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111346672_111346909_111347050_111348515_111348647_111350105_111350224_111351258
transcript_82114.known	chr2	+	1650	12	FSM	ENSG00000138385.16	ENST00000260956.9	1650	12	0	0	0	0	multi-exon	FALSE	canonical	3	2756	junction_6	250.638259629456	15263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	2	True	NA	39	True	AATAAA	-28	NA	169798870	169812064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_82115.known	chr2	+	619	4	FSM	ENSG00000138385.16	ENST00000461708.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	3126	junction_3	135.816870167966	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCACGTTGGAGTGCAG	11	True	NA	NA	False	NA	NA	NA	169798879	169806007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664
transcript_82116.known	chr2	-	1370	7	FSM	ENSG00000138382.15	ENST00000410097.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_6	233.218781404929	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAACAAAAGTCGTTTAA	24	True	NA	-25	True	TTTAAA	-6	NA	169824874	169811813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_82117.known	chr2	-	880	8	FSM	ENSG00000138382.15	ENST00000409965.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_7	241.951504670347	5438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-27	True	NA	-18	True	AATAAA	-17	NA	169824925	169811756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_82118.known	chr2	-	1001	7	FSM	ENSG00000138382.15	ENST00000260953.10	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	201.490005266321	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-7	True	NA	-18	True	AATAAA	-17	NA	169824905	169811756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488
transcript_82119.known	chr2	-	472	6	FSM	ENSG00000138382.15	ENST00000409340.5	472	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	384.196616330753	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	84	False	NA	-18	True	AATAAA	-17	NA	169824814	169811756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169824488_169824641_169824781
transcript_82122.known	chr2	-	548	5	FSM	ENSG00000234350.6	ENST00000671292.1	548	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6583123951777	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTATGTGACAAGACTA	-6	True	NA	NA	False	AATAAA	-26	NA	170770773	170700367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170700580_170723503_170723594_170727284_170727329_170727658_170727789_170770701
transcript_82124.known	chr2	-	1320	5	FSM	ENSG00000234350.6	ENST00000654500.1	1320	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.73205080756888	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAGCACATGTAA	NA	False	NA	NA	False	AATAAA	-33	NA	170770789	170723191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170723594_170727284_170727329_170727658_170727789_170740631_170741288_170770701
transcript_82125.known	chr2	-	675	4	FSM	ENSG00000234350.6	ENST00000667568.2	699	4	24	0	-2	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAGCACATGTAA	NA	False	NA	NA	False	AATAAA	-33	NA	170770800	170723191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170723594_170727284_170727329_170727658_170727789_170770701
transcript_82129.nnic	chr2	+	746	8	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	-8	0	multi-exon	FALSE	canonical	1	2	junction_5	27.7098670998956	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAATTCTTCCTTATTTG	-4	True	NA	38	True	TATAAA	-17	NA	170771039	170798971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170792862_170792921_170798040_170798113_170798769
transcript_82132.nnic	chr2	+	1129	6	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	5	6574	multi-exon	FALSE	canonical	3	29	junction_1	21.9909072118455	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGATGCTTACCTGGCTA	62	False	NA	21	True	AATAAA	-44	NA	170770982	170785303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645
transcript_82136.known	chr2	+	1327	4	FSM	ENSG00000239467.7	ENST00000662201.2	1444	4	117	0	-21	0	multi-exon	FALSE	canonical	3	29	junction_1	24.5356882927706	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	-17	True	NA	4	True	AATAAA	-15	NA	170771026	170778729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643
transcript_82139.known	chr2	+	1111	4	FSM	ENSG00000239467.7	ENST00000688829.1	1041	4	401	-471	61	0	multi-exon	FALSE	canonical	3	21	junction_1	27.956315128349	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACAGAGGACCTTAT	238	False	NA	9	True	ATTAAA	-22	NA	170771337	170778584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643
transcript_82142.known	chr2	+	1291	3	FSM	ENSG00000239467.7	ENST00000662915.2	1411	3	118	2	-20	0	multi-exon	FALSE	canonical	3	13	junction_1	38	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTTGTCTTTGAGGG	-16	True	NA	0	True	AATAAA	-11	NA	170771027	170778725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170771188_170777376_170777426_170777643
transcript_82145.known	chr2	+	1505	3	FSM	ENSG00000239467.7	ENST00000664870.2	1628	3	123	0	10	0	multi-exon	FALSE	canonical	3	11	junction_1	39	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	14	True	NA	4	True	AATAAA	-15	NA	170771057	170778729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170771428_170777376_170777426_170777643
transcript_82146.nnic	chr2	+	1089	10	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	3	0	multi-exon	FALSE	canonical	2	3	junction_4	26.7198543649465	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAATTCTTCCTTATTTG	60	False	NA	38	True	TATAAA	-17	NA	170770980	170798971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170779792_170779889_170782240_170782390_170784645_170784834_170792862_170792921_170798040_170798113_170798769
transcript_82147.nnic	chr2	+	993	9	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	3	0	multi-exon	FALSE	canonical	3	17	junction_8	23.4170744329859	117	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAATTCTTCCTTATTTG	60	False	NA	38	True	TATAAA	-17	NA	170770980	170798971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645_170784834_170792862_170792921_170798040_170798113_170798769
transcript_82151.nnic	chr2	+	946	8	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	19	0	multi-exon	FALSE	canonical	3	13	junction_1	24.5107223517399	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTAATTCTTCCTTATTTG	76	False	NA	38	True	TATAAA	-17	NA	170770996	170798971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_170771188_170777376_170777426_170777643_170777681_170782240_170782390_170784645_170784834_170792862_170792921_170798040_170798113_170798769
transcript_82155.nnic	chr2	+	1057	6	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	-7	6560	multi-exon	FALSE	canonical	3	29	junction_1	21.9909072118455	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTGTCCACACACAGA	-3	True	NA	7	True	AATAAA	-30	NA	170771040	170785289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643_170777681_170782240_170782390_170784645
transcript_82161.nnic	chr2	+	1070	5	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	19	6560	multi-exon	FALSE	canonical	3	13	junction_1	27.725214156071	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTGTCCACACACAGA	76	False	NA	7	True	AATAAA	-30	NA	170770996	170785289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_170771188_170777376_170777426_170777643_170777681_170782240_170782390_170784645
transcript_82163.known	chr2	+	3279	17	FSM	ENSG00000128683.14	ENST00000358196.8	3279	17	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	2.31756202721739	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCTAGTTTGTGTTT	-1	True	NA	NA	False	AATAAA	-34	NA	170816886	170861151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170844044_170844158_170845505_170845622_170845705_170845786_170846008_170846064_170847675_170847793_170849285_170849351_170852713_170852793_170853872_170854023_170857017_170857126_170858803_170858894_170859708
transcript_82165.known	chr2	+	1029	7	FSM	ENSG00000128683.14	ENST00000344257.9	1029	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.26691175145591	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGATCCTTCAGGATC	2	True	NA	7	True	AATAAA	-18	NA	170816911	170842759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170842568
transcript_82167.known	chr2	+	2447	10	FSM	ENSG00000115806.13	ENST00000234160.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_9	91.4497770822601	671	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGCTTCCTCAGTTA	14	True	NA	14	True	ATTAAA	-29	NA	170929252	170967130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170954649_170954783_170956435_170956560_170961662_170961750_170962838_170962947_170965789
transcript_82173.known	chr2	-	5723	21	FSM	ENSG00000198586.14	ENST00000431350.7	5723	21	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_18	13.3261960063628	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTATTAGCTGTGTT	48	True	NA	-8	True	ATTAAA	-20	NA	171160893	170990822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_82181.nic	chr2	-	1095	9	ISM	ENSG00000198586.14	ENST00000409443.6	2783	21	151	53409	84	3584	5prime_fragment	FALSE	canonical	3	82	junction_6	13.6238531627436	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACTTGAAAAATACAAAGA	0	True	NA	NA	False	AATAGA	-14	NA	171160749	171050132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_82183.known	chr2	-	4321	23	FSM	ENSG00000198586.14	ENST00000359766.7	4321	23	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	38.8860647669297	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTGGAAGGGAGCTTT	649	False	NA	8	True	AATAAA	-33	NA	171160495	170992153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171022871_171023130_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171081639_171081709_171082780_171082853_171117738_171117858_171160289
transcript_8219.known	chr1	-	2023	1	FSM	ENSG00000260948.1	ENST00000564771.1	2023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTGCGTACTTGGGCA	NA	False	NA	NA	False	AATAAA	-17	NA	111433068	111431045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111431000_111433100
transcript_82196.known	chr2	-	9770	10	FSM	ENSG00000123600.21	ENST00000375258.9	9770	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	24.0744729311688	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	26	True	NA	NA	False	ATTAAA	-20	NA	171433990	171315745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171433882
transcript_82209.nnic	chr2	-	2230	9	NIC	ENSG00000123600.21	novel	9770	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_8	34.1227105459106	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	669	False	NA	NA	False	NA	NA	NA	171434110	171323250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171433882
transcript_82215.known	chr2	-	2246	9	FSM	ENSG00000123600.21	ENST00000447486.5	2246	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	45.3236624182115	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	670	False	NA	NA	False	NA	NA	NA	171434109	171323250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171324363_171325840_171325907_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171414602_171414727_171433882
transcript_82226.known	chr2	-	697	4	FSM	ENSG00000123600.21	ENST00000463392.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	46.8852025933793	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAGTTAGTATTAT	NA	False	NA	7	True	NA	NA	NA	171327065	171323900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171327003
transcript_82236.known	chr2	-	1697	10	FSM	ENSG00000123600.21	ENST00000392604.6	1697	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	39.8748040747538	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTGCTTGTTCCTTGA	692	False	NA	-25	True	NA	NA	NA	171434087	171323932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171324363_171325840_171325907_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171433882
transcript_82238.known	chr2	+	5853	14	FSM	ENSG00000115827.14	ENST00000375255.8	5853	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	26.9489985103354	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGTGAACATGTGTC	0	True	NA	17	True	AATAAA	-25	NA	171434225	171485052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171434704_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171458371_171458478_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
transcript_82249.known	chr2	+	2429	13	FSM	ENSG00000115827.14	ENST00000468592.5	2429	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	35.3304833756284	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAAAATGTTTCTT	-9	True	NA	NA	False	AATAAA	-13	NA	171434216	171482158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171434271_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
transcript_82250.nnic	chr2	+	1166	2	Genic_Genomic	ENSG00000233934.2	novel	167	1	NA	NA	-69865	328	multi-exon	FALSE	canonical	0	0	junction_1	0	23962	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAAGACCTCTGGACTG	NA	False	NA	NA	False	AATAGA	-10	NA	171517227	171587587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_171517755_171586948
transcript_82252.known	chr2	-	447	1	FSM	ENSG00000233762.3	ENST00000433675.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	20	False	NA	-49	True	NA	NA	NA	171517716	171517269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171517300_171517700
transcript_82255.known	chr2	+	1493	4	FSM	ENSG00000071967.12	ENST00000409484.5	1493	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	22.9540604009158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCAGAGAGCACTTTT	-1	True	NA	NA	False	AATGAA	-39	NA	171522246	171555607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522292_171541584_171541794_171553345_171553501_171554523
transcript_82256.known	chr2	+	4235	4	FSM	ENSG00000071967.12	ENST00000321348.9	4235	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	2.94392028877595	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTGTGTTATCAAT	-4	True	NA	4	True	AATAAA	-14	NA	171522473	171558129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522739_171541584_171541794_171553345_171553501_171554523
transcript_82259.known	chr2	+	763	3	FSM	ENSG00000071967.12	ENST00000468308.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	19.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGCCATGTTGCCCGGG	100	False	NA	NA	False	NA	NA	NA	171522347	171551140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522739_171541584_171541794_171550977
transcript_8226.known	chr1	+	678	5	FSM	ENSG00000116459.11	ENST00000483994.1	678	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	951.095782505632	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGACTGACTAAATGGAA	2	True	NA	NA	False	NA	NA	NA	111449483	111461026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111449582_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_82260.known	chr2	+	3540	3	FSM	ENSG00000071967.12	ENST00000375252.3	3540	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	25	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACAAAGAAGGCAATTGC	-1	True	NA	NA	False	NA	NA	NA	171522476	171557646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522739_171553345_171553501_171554523
transcript_82261.known	chr2	+	4354	18	FSM	ENSG00000077380.16	ENST00000397119.8	4354	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	287.687173913962	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGTATTATTTAAAC	-7	True	NA	NA	False	AATAAA	-16	NA	171687468	171750158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_82262.known	chr2	+	2552	18	FSM	ENSG00000077380.16	ENST00000409453.5	2552	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	305.504891539113	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTTTTACTCCTTAC	24	True	NA	14	True	AATAAA	-26	NA	171687775	171748420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_82265.known	chr2	+	2196	17	FSM	ENSG00000077380.16	ENST00000409317.5	2196	17	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	218.449615186203	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGCAGCAAGGAAACTT	177	False	NA	19	True	ATTAAA	-29	NA	171687707	171748011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_82267.known	chr2	+	2494	16	FSM	ENSG00000077380.16	ENST00000508530.5	2494	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_15	190.381324947824	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	25	False	NA	5	True	AATAAA	-17	NA	171687500	171748411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_82273.known	chr2	+	2572	16	FSM	ENSG00000077380.16	ENST00000409197.5	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	70.1136854607493	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	141	False	NA	5	True	AATAAA	-17	NA	171687671	171748411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_8228.known	chr1	+	1040	6	FSM	ENSG00000116459.11	ENST00000369721.8	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	839.936759524192	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTTTCAAGTTGTATAA	-17	True	NA	16	True	AATAAA	-20	NA	111449464	111461332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111449582_111449836_111449874_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_82284.known	chr2	+	2589	16	FSM	ENSG00000077380.16	ENST00000340296.8	2589	16	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	104.211750243861	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	NA	False	NA	5	True	AATAAA	-17	NA	171687408	171748411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_8229.known	chr1	+	2628	7	FSM	ENSG00000116459.11	ENST00000369722.8	2628	7	0	0	0	0	multi-exon	FALSE	canonical	3	2064	junction_4	71.7280744664644	10016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGTGCTAAGCAAC	-18	True	NA	NA	False	ATTAAA	-18	NA	111449463	111462773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111449582_111449836_111449874_111454210_111454357_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_82296.known	chr2	+	581	3	FSM	ENSG00000077380.16	ENST00000471482.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	150.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAGTAATTATTAACAT	-4	True	NA	NA	False	NA	NA	NA	171687471	171693084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687628_171690146_171690264_171692776
transcript_82298.nic	chr2	+	340	2	ISM	ENSG00000077380.16	ENST00000471482.5	581	3	-70	2824	-7	-2824	5prime_fragment	FALSE	canonical	3	363	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	NA	False	NA	55	True	AAGAAA	-12	NA	171687401	171690260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_171687628_171690146
transcript_82299.nic	chr2	+	368	2	ISM	ENSG00000077380.16	ENST00000411953.5	582	6	-135	25090	-52	-2824	5prime_fragment	FALSE	canonical	3	557	junction_1	0	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	89	False	NA	55	True	AAGAAA	-12	NA	171687619	171690260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_171687874_171690146
transcript_8230.known	chr1	-	2456	10	FSM	ENSG00000116455.14	ENST00000235090.10	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_1	51.3679536935886	931	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGATCCTCTGGCGT	-11	True	NA	1	True	AGTAAA	-16	NA	111449256	111439889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_82301.known	chr2	+	1047	9	FSM	ENSG00000077380.16	ENST00000435234.5	1047	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	215.783456270401	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTATGGTGGTCTTTTAA	90	False	NA	NA	False	AATACA	-33	NA	171687880	171726913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171688004_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790
transcript_82303.known	chr2	-	3936	18	FSM	ENSG00000115840.14	ENST00000422440.7	3936	18	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	7.31448768566919	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAGTATTTCATTGTAT	-5	True	NA	-8	True	TATAAA	-18	NA	171894244	171783404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171785476_171787570_171787662_171787788_171787948_171791450_171791590_171793626_171793768_171809605_171809687_171810223_171810277_171813338_171813498_171815120_171815203_171826797_171826883_171833962_171834057_171834726_171834866_171837120_171837268_171844368_171844509_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_82307.nnic	chr2	-	511	5	NNC	ENSG00000115840.14	novel	556	5	NA	NA	-1	4879	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	14.5086181285469	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTTTTCCCTGAAG	-6	True	NA	NA	False	AATAAA	-27	NA	171894245	171850921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_171851077_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_8231.known	chr1	+	859	6	FSM	ENSG00000116459.11	ENST00000468818.1	859	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	874.217272764614	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAATTGAATGAAACA	3	True	NA	-4	True	TTTAAA	-31	NA	111449484	111461312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111449582_111449836_111449874_111456226_111456250_111456629_111456756_111459456_111459637_111460916
transcript_82311.nic	chr2	-	606	4	ISM	ENSG00000115840.14	ENST00000426896.5	911	9	-63	21615	-63	155	5prime_fragment	FALSE	canonical	3	34	junction_3	1.69967317119759	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTAGTAATGCTGTTG	198	False	NA	NA	False	ATTAAA	-18	NA	171894307	171855645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_171855950_171868680_171868824_171893204_171893259_171894202
transcript_82313.nic	chr2	-	671	3	ISM	ENSG00000115840.14	ENST00000426896.5	911	9	-63	34281	-63	-12385	5prime_fragment	FALSE	canonical	3	34	junction_2	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAACCCACAAACTTA	198	False	NA	NA	False	NA	NA	NA	171894307	171868311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_171868824_171893204_171893259_171894202
transcript_82315.nic	chr2	-	743	2	ISM	ENSG00000115840.14	ENST00000426896.5	911	9	-63	58590	-63	-36694	5prime_fragment	FALSE	canonical	3	34	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAAGGTTGGCTT	198	False	NA	NA	False	AAAAAG	-12	NA	171894307	171892620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_171893259_171894202
transcript_82324.known	chr2	+	1634	11	FSM	ENSG00000128708.13	ENST00000264108.5	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	128.548978992445	2950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTTCCACACTTTGC	-8	True	NA	16	True	AATAAA	-20	NA	171922460	171983686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171922508_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_82328.known	chr2	+	1567	10	FSM	ENSG00000128708.13	ENST00000412731.5	1567	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	287.380291771662	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTCCTTCCACACT	-21	True	NA	12	True	AATAAA	-16	NA	171922447	171983682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171922508_171925536_171925642_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_8233.nic	chr1	+	1534	9	FSM	ENSG00000116473.15	ENST00000687939.1	5101	9	12	3555	0	0	multi-exon	FALSE	canonical	2	9	junction_1	95.6461577900545	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTGTTTTTG	4	True	NA	26	True	ATTAAA	-40	NA	111619788	111713113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111619935_111627469_111627564_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_82334.known	chr2	+	3049	10	FSM	ENSG00000172878.14	ENST00000315796.5	3049	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	12.4672410245985	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGGTGTATATATAT	-1	True	NA	5	True	ATTAAA	-15	NA	171999952	172082430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_172000010_172061497_172061656_172063710_172063861_172065603_172065753_172066263_172066307_172070906_172071071_172077796_172077895_172079214_172079263_172080127_172080207_172080327
transcript_8234.known	chr1	+	5024	8	FSM	ENSG00000116473.15	ENST00000369709.4	5018	8	-6	0	6	0	multi-exon	FALSE	canonical	3	166	junction_1	27.7098670998956	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGACTCTTATTT	-2	True	NA	8	True	AATAAA	-16	NA	111619782	111716691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_82346.known	chr2	+	929	3	FSM	ENSG00000172878.14	ENST00000493035.5	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGACCAGCCTGGCCAA	-11	True	NA	NA	False	NA	NA	NA	171999942	172064414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_172000010_172061497_172061656_172063710
transcript_82348.known	chr2	+	267	3	FSM	ENSG00000172878.14	ENST00000491440.1	267	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACTGGGGAGACAGCATA	NA	False	NA	NA	False	CATAAA	-33	NA	172021798	172063750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_172021868_172061497_172061656_172063710
transcript_8235.known	chr1	+	3600	11	FSM	ENSG00000064703.13	ENST00000369702.5	3600	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	31.840854259897	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTTTGCTTTTTTCCTC	-10	True	NA	NA	False	AATATA	-14	NA	111755900	111768000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111760849_111760986_111761126_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111765736
transcript_82356.known	chr2	+	2312	12	FSM	ENSG00000091436.17	ENST00000539448.5	2312	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.8552715051079	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	173075434	173222204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173075671_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173221149
transcript_82357.known	chr2	+	7179	12	FSM	ENSG00000091436.17	ENST00000338983.7	7179	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	13.0959586220866	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTTGTTACGTGTTGCT	-22	True	NA	NA	False	AATAAA	-16	NA	173075841	173227146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173221149
transcript_82359.known	chr2	+	4010	10	FSM	ENSG00000091436.17	ENST00000476618.5	4010	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	9.32142096940638	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGGCTGTGCAAAAAT	4	True	NA	NA	False	AAAAAG	-9	NA	173075867	173212825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728
transcript_82361.nnic	chr2	+	1426	7	NNC	ENSG00000091436.17	novel	2572	20	NA	NA	76685	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	13.0256157883866	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	173236694	173266783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_173236888_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
transcript_82365.known	chr2	+	2778	10	FSM	ENSG00000144354.14	ENST00000306721.8	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_2	215.732344455912	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCTTTTGACTGAAGT	9	True	NA	18	True	AATAAA	-27	NA	173354871	173368997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_8237.known	chr1	+	2688	10	FSM	ENSG00000064703.13	ENST00000680983.1	2688	10	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_7	32.773446041454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATAGATTTGATTAGTAA	231	False	NA	-9	True	AATAAA	-2	NA	111756193	111767243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111756226_111756645_111756741_111759399_111759569_111760473_111760589_111760705_111761126_111761225_111761285_111762254_111762338_111762676_111762783_111762905_111763008_111765736
transcript_82375.known	chr2	+	2500	9	FSM	ENSG00000144354.14	ENST00000347703.7	2500	9	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_2	105.603030259553	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	NA	False	NA	18	True	AATAAA	-14	NA	173354819	173368904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_82378.known	chr2	+	2943	8	FSM	ENSG00000144354.14	ENST00000496441.5	2943	8	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_2	94.3305088397131	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTGATATTAAAAACTA	9	True	NA	1	True	AATAAA	-22	NA	173354871	173368500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_82386.nic	chr2	+	1377	4	ISM	ENSG00000144354.14	ENST00000496441.5	2943	8	-33	3815	19	-188	5prime_fragment	FALSE	canonical	3	572	junction_2	135.907648382602	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGCTCTCTTTACTTAAA	-24	True	NA	NA	False	AAAAAG	-7	NA	173354838	173364685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817
transcript_8239.known	chr1	-	501	3	FSM	ENSG00000197852.12	ENST00000527570.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGTATGAGGCGTCT	-19	True	NA	NA	False	NA	NA	NA	111739403	111680629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111680775_111686545_111686684_111739185
transcript_82394.nnic	chr2	+	1321	3	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGTCCTGTGTTTAT	NA	False	NA	5	True	AATAAA	-2	NA	173532822	173693656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_173533037_173533205_173533340_173692683
transcript_82398.nnic	chr2	+	1472	2	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGTCCTGTGTTTAT	NA	False	NA	5	True	AATAAA	-2	NA	173532840	173693656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_173533340_173692683
transcript_82401.nnic	chr2	-	504	3	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGCCTCACGATCC	NA	False	NA	NA	False	AATAAA	-22	NA	173763621	173692080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_173692367_173709109_173709171_173763464
transcript_82407.nnic	chr2	+	1010	3	Genic_Genomic	ENSG00000270460.1	novel	317	1	NA	NA	-278279	0	multi-exon	FALSE	canonical	1	3	junction_2	2.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	173532796	173811392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_173533340_173761578_173761731_173811077
transcript_82408.nnic	chr2	+	658	3	Genic_Genomic	ENSG00000270460.1	novel	317	1	NA	NA	-278248	0	multi-exon	FALSE	canonical	0	0	junction_2	3	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	173532827	173811392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_173533037_173533205_173533340_173811077
transcript_82413.nnic	chr2	+	814	2	Genic_Genomic	ENSG00000270460.1	novel	317	1	NA	NA	-278235	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	173532840	173811392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_173533340_173811077
transcript_82414.known	chr2	+	317	1	FSM	ENSG00000270460.1	ENST00000604994.1	317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	NA	False	AATAAA	-22	NA	173811075	173811392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173811100_173811400
transcript_82417.known	chr2	-	11714	7	FSM	ENSG00000172845.18	ENST00000310015.12	11714	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	126.547421941342	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTACACATCCTTTATTG	-5	True	NA	-5	True	AATAAA	-19	NA	173965373	173900774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_173910258_173913069_173913267_173918592_173918786_173954872_173956233_173963760_173963884_173964404_173964554_173965164
transcript_82418.known	chr2	-	358	2	FSM	ENSG00000273258.1	ENST00000609273.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATCTAGTCTTACCTG	9865	False	NA	NA	False	ATTAAA	-18	NA	174012975	174011855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174012117_174012878
transcript_8242.known	chr1	+	2240	3	FSM	ENSG00000227811.3	ENST00000430373.2	2240	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAGAACAAGGACATCC	7	True	NA	NA	False	AATAAA	-20	NA	111739719	111747765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111740099_111744374_111744530_111746059
transcript_82427.known	chr2	-	711	7	FSM	ENSG00000138430.16	ENST00000392560.6	711	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	320.876274182641	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAACATACAACTTCCAA	NA	False	NA	-25	True	AATAAA	-17	NA	174124315	174075408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174124263
transcript_82435.nnic	chr2	-	1046	5	NNC	ENSG00000138430.16	novel	1656	10	NA	NA	5523	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_4	373.733862527869	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	151	False	NA	-3	True	AATAAA	-16	NA	174118147	174075007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174117982
transcript_82439.known	chr2	-	4251	11	FSM	ENSG00000138430.16	ENST00000284719.8	4251	11	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_10	67.8810724723763	3457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGAGTGACTTTTTTGT	1	True	NA	-6	True	AATAAA	-15	NA	174248532	174072446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_8244.known	chr1	+	2393	3	FSM	ENSG00000227811.3	ENST00000658759.1	2393	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAATGTGTATCCATA	33	False	NA	NA	False	AATAGA	-26	NA	111739578	111747798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111740078_111744374_111744530_111746059
transcript_82440.known	chr2	-	1656	10	FSM	ENSG00000138430.16	ENST00000344357.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_9	259.493999550027	3192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-10	True	NA	-3	True	AATAAA	-16	NA	174248599	174075007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
transcript_82441.known	chr2	-	1270	8	FSM	ENSG00000138430.16	ENST00000428402.6	1270	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	311.260767373793	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTTGGTGTGTTTGGG	114	False	NA	-5	True	AATAAA	-14	NA	174248475	174075009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174075528_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_82442.known	chr2	-	1918	10	FSM	ENSG00000138433.16	ENST00000342016.8	1918	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	89.1079245758884	726	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTAGGTGTTTTGT	-31	True	NA	-5	True	AATAAA	-17	NA	174395712	174348021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
transcript_82443.known	chr2	+	3052	8	FSM	ENSG00000144306.15	ENST00000272732.11	3052	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	26.2662971761712	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACCAGAATGGTACATT	-25	True	NA	NA	False	NA	NA	NA	174395729	174429575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174395818_174398274_174398443_174399921_174400104_174400989_174401190_174404102_174404316_174422884_174423048_174424474_174424650_174427712
transcript_82447.known	chr2	+	943	4	FSM	ENSG00000144306.15	ENST00000549848.5	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	15.369522511198	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATATGGTCAGCTAAT	NA	False	NA	NA	False	NA	NA	NA	174410081	174427895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174410504_174422884_174423048_174424474_174424650_174427712
transcript_82449.known	chr2	+	1674	4	FSM	ENSG00000144306.15	ENST00000548921.5	1674	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.3723161756065	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAACAAAAGAAAAATCCA	NA	False	NA	NA	False	CATAAA	-31	NA	174410036	174428859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174410226_174422884_174423048_174424474_174424650_174427712
transcript_82452.known	chr2	+	658	3	FSM	ENSG00000144306.15	ENST00000475928.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	25.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATTAAACTACGTATA	NA	False	NA	NA	False	NA	NA	NA	174410343	174428035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174410504_174424474_174424650_174427712
transcript_82455.known	chr2	-	3930	17	FSM	ENSG00000163328.14	ENST00000295500.8	3930	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.58113883008419	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTTACTATAATTTCAAA	21	True	NA	NA	False	TATAAA	-44	NA	174487037	174435143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174436417_174439897_174440036_174442118_174442184_174445080_174445177_174446610_174446748_174453736_174453842_174459877_174460089_174461401_174461493_174461587_174461673_174465784_174465903_174466543_174466628_174468911_174469068_174470389_174470556_174472964_174473365_174481496_174481988_174483009_174483159_174486872
transcript_82459.nnic	chr2	+	360	2	NNC	ENSG00000226853.4	novel	393	2	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCCCAGTGTATTA	NA	False	NA	19	True	ATTAAA	-19	NA	174487322	174488300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_174487417_174488034
transcript_82460.known	chr2	+	393	2	FSM	ENSG00000226853.4	ENST00000417038.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCCCAGTGTATTA	5	True	NA	19	True	ATTAAA	-19	NA	174487402	174488300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174487530_174488034
transcript_82462.known	chr2	-	2003	8	FSM	ENSG00000115935.18	ENST00000359761.7	2003	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	6.24989795835067	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAAAGTCCCTGAGAGCT	8	True	NA	-43	True	NA	NA	NA	174682883	174562203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174562603_174567069_174567184_174567860_174568074_174571675_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_82463.known	chr2	-	1772	5	FSM	ENSG00000115935.18	ENST00000409415.7	1772	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	5.71729831301464	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTCTTTGTAATCT	20	True	NA	-1	True	ATTAAA	-20	NA	174682871	174571168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_82464.known	chr2	-	553	3	FSM	ENSG00000115935.18	ENST00000487291.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-25	True	NA	NA	False	NA	NA	NA	174682916	174676336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174676667_174677044_174677125_174682773
transcript_82466.nnic	chr2	-	498	2	NIC	ENSG00000115935.18	novel	553	3	NA	NA	-10	15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGGGAGGGAGGA	-35	True	NA	NA	False	NA	NA	NA	174682926	174676321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_174676667_174682773
transcript_82467.known	chr2	-	3028	9	FSM	ENSG00000115935.18	ENST00000272746.9	3028	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.1575063912241	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGAATATATTATATT	-8	True	NA	NA	False	AATAAA	-29	NA	174682899	174560769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174562126_174562550_174562603_174567069_174567184_174567860_174568074_174571675_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_82469.nnic	chr2	+	907	2	Genic_Genomic	ENSG00000235655.3	novel	411	1	NA	NA	-109	536	multi-exon	FALSE	canonical	0	0	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTTGGTATAAATATA	0	True	NA	NA	False	ATTAAA	-30	NA	174719798	174720854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_174720041_174720189
transcript_8247.known	chr1	+	779	2	FSM	ENSG00000227811.3	ENST00000524935.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTCACAGAAAGACTGGAA	20	False	NA	NA	False	NA	NA	NA	111739852	111746613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111740078_111746059
transcript_82470.nnic	chr2	+	980	2	Genic_Genomic	ENSG00000235655.3	novel	411	1	NA	NA	-108	535	multi-exon	FALSE	canonical	0	0	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTTGGTATAAATAT	1	False	NA	NA	False	ATTAAA	-29	NA	174719799	174720853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_174720041_174720114
transcript_82471.known	chr2	+	411	1	FSM	ENSG00000235655.3	ENST00000369387.4	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	558	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	84	False	NA	NA	False	NA	NA	NA	174719907	174720318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174719900_174720300
transcript_82473.known	chr2	-	3156	13	FSM	ENSG00000128656.15	ENST00000409900.9	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_7	59.4565083812436	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAAGATTATTCCAAAA	0	True	NA	NA	False	AATAAA	-16	NA	175005381	174798808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893
transcript_82477.known	chr2	-	1719	8	FSM	ENSG00000128656.15	ENST00000650731.1	1719	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	109.336962773672	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGTACAACACAGC	-2	True	NA	-35	True	AATAAA	-16	NA	174847596	174799511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174847312
transcript_8248.known	chr1	-	5951	2	FSM	ENSG00000197852.12	ENST00000357260.6	5951	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGATTCCCTCTGAA	-11	True	NA	-6	True	AATAAA	-18	NA	111739395	111722063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111727805_111739185
transcript_82480.known	chr2	-	2232	7	FSM	ENSG00000128656.15	ENST00000295497.12	2232	7	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	30.0578146614524	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTTGTTTACTGTTAA	10	True	NA	44	True	ATTAAA	-20	NA	174847555	174799312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879
transcript_82482.known	chr2	-	1606	6	FSM	ENSG00000128656.15	ENST00000651717.1	1606	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.044353506641	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCATACCAATAAAAAGT	5	True	NA	-47	True	AATAAA	-4	NA	174847225	174799523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174846879
transcript_82486.known	chr2	-	1989	15	FSM	ENSG00000115966.18	ENST00000428760.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	69.3993177640995	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTGTAGCAGCAGT	-5	True	NA	NA	False	ATTAAA	-10	NA	175168169	175074473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175074836_175080659_175080766_175092542_175092617_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_82487.known	chr2	-	4164	14	FSM	ENSG00000115966.18	ENST00000264110.7	4164	14	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_9	35.5021459473073	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATAATTTGCTTGTTC	-39	True	NA	-13	True	AATAAA	-17	NA	175168203	175072258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_82488.known	chr2	-	1861	14	FSM	ENSG00000115966.18	ENST00000456655.5	1861	14	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	71.2260340675661	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTACTTGAAATTA	-5	True	NA	NA	False	NA	NA	NA	175168169	175074504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175074836_175080659_175080766_175092542_175092617_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_8249.known	chr1	-	1423	2	FSM	ENSG00000197852.12	ENST00000444059.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTCAGCTTCTTTGG	25	False	NA	-1	True	AATAAA	-23	NA	111755824	111726505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111727805_111755700
transcript_82492.known	chr2	-	4079	13	FSM	ENSG00000115966.18	ENST00000345739.9	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_9	31.7774378381196	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTCTCTTACCTT	-42	True	NA	-4	True	AATAAA	-26	NA	175168206	175072249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_8250.known	chr1	+	5864	6	FSM	ENSG00000143079.15	ENST00000271277.11	5864	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	18.1173949562292	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTAGTGGTTCTCAAA	-5	True	NA	4	True	AATAAA	-16	NA	112396213	112461164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112396273_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
transcript_82501.nic	chr2	-	1765	9	ISM	ENSG00000115966.18	ENST00000428760.5	1989	15	-40	38798	-3	722	5prime_fragment	FALSE	canonical	3	106	junction_4	42.9212578450352	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAATAGTTTAATGAACA	-45	True	NA	NA	False	NA	NA	NA	175168209	175113271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_82503.known	chr2	-	1335	8	FSM	ENSG00000115966.18	ENST00000409833.5	1335	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	43.4670881829234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTGCTTTGCTGTGGT	-5	True	NA	NA	False	ATTAAA	-15	NA	175168169	175114242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_82504.nic	chr2	-	1673	8	ISM	ENSG00000115966.18	ENST00000456655.5	1861	14	-45	38767	-8	722	5prime_fragment	FALSE	canonical	3	97	junction_4	39.7204517309948	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAATAGTTTAATGAACA	134	False	NA	NA	False	NA	NA	NA	175168214	175113271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_82507.nic	chr2	-	823	3	ISM	ENSG00000115966.18	ENST00000413123.5	681	6	-161	9226	77	-9026	5prime_fragment	FALSE	canonical	3	207	junction_1	3	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAGAAAGAAAGAAAA	5	True	NA	NA	False	ATTAAA	-35	NA	175168305	175136018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_175136487_175151059_175151159_175168049
transcript_82508.known	chr2	+	497	2	FSM	ENSG00000229750.1	ENST00000449168.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGGCGCGGGTGCAGG	NA	False	NA	NA	False	NA	NA	NA	175167903	175168522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_175167936_175168057
transcript_82515.known	chr2	-	842	4	FSM	ENSG00000154518.10	ENST00000392541.3	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	3219	junction_1	156.889203650928	9257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGATTTGTAC	4	True	NA	-13	True	ATTAAA	-14	NA	175181663	175178144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354
transcript_82516.known	chr2	-	795	5	FSM	ENSG00000154518.10	ENST00000409194.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	1483.81743738911	4821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAGGAAGCTACAGCAG	-3	True	NA	65	True	NA	NA	NA	175181710	175178066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354_175181484_175181655
transcript_82517.known	chr2	-	1313	4	FSM	ENSG00000154518.10	ENST00000497075.5	1313	4	0	0	0	0	multi-exon	FALSE	canonical	3	2630	junction_3	433.396662039138	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTATTTCCAAAGTCATT	-3	True	NA	-54	True	NA	NA	NA	175181710	175178185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175179251_175180097_175180179_175181354_175181467_175181655
transcript_82518.known	chr2	-	7542	13	FSM	ENSG00000144320.14	ENST00000272748.9	7542	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	9.05960202706989	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTTATCACTCCATA	5	True	NA	-21	True	AATAAA	-26	NA	176002267	175923881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
transcript_82525.known	chr2	+	1259	2	FSM	ENSG00000128713.14	ENST00000498438.1	1259	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCACTAAAATAGTAGTCG	4281	False	NA	NA	False	AATGAA	-12	NA	176104215	176109754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_176104627_176108906
transcript_82526.known	chr2	-	345	1	FSM	ENSG00000218175.2	ENST00000405359.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2312	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAACGTGTTC	126	False	NA	NA	False	NA	NA	NA	176201252	176200907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_176200900_176201300
transcript_82529.known	chr2	+	1592	11	FSM	ENSG00000128654.14	ENST00000420864.5	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	216.426800558526	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	NA	False	NA	10	True	AATAAA	-21	NA	176269394	176338025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_176269670_176270215_176270420_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_82535.known	chr2	+	799	7	FSM	ENSG00000128654.14	ENST00000443241.5	799	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	214.537228056629	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTCTTAACTTTTGA	32	False	NA	NA	False	NA	NA	NA	176269469	176337679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_176269670_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_82538.known	chr2	+	1341	10	FSM	ENSG00000128654.14	ENST00000249442.11	1341	10	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	45.0801754901445	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	4	True	NA	10	True	AATAAA	-21	NA	176269441	176338025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_8254.known	chr1	+	1014	6	FSM	ENSG00000143079.15	ENST00000441739.1	1014	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	79.6206003494071	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGTGAAGGACCTAGAG	11	False	NA	49	True	AAGAAA	-16	NA	112396518	112456306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112396586_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
transcript_82545.known	chr2	+	5688	11	FSM	ENSG00000170144.21	ENST00000411529.6	5688	11	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_1	869.440647773038	3650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTTTATCAGTTAT	NA	False	NA	6	True	AATAAA	-17	NA	177212748	177223958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_82547.known	chr2	+	3028	11	FSM	ENSG00000170144.21	ENST00000676874.1	3028	11	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_10	1223.11465120814	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	NA	False	NA	-10	True	AATAAA	-1	NA	177212740	177223942	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_82553.known	chr2	+	1911	11	FSM	ENSG00000170144.21	ENST00000679328.1	1911	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	1041.30339478943	2576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	471	False	NA	-31	True	GATAAA	-36	NA	177213265	177220085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177213419_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_8256.nnic	chr1	+	698	4	NNC	ENSG00000143079.15	novel	5864	6	NA	NA	-30	9268	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	96.0937042682818	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCTTTTAAAATAAATTT	5101	False	NA	NA	False	AATAAA	-18	NA	112396183	112425555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_112396273_112412193_112412318_112416156_112416265_112425178
transcript_8259.nic	chr1	+	342	3	ISM	ENSG00000143079.15	ENST00000271277.11	5864	6	-30	44879	-30	-2	5prime_fragment	FALSE	canonical	3	196	junction_1	13.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGTCATCATACATTGT	5101	False	NA	NA	False	AAGAAA	-7	NA	112396183	112416285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_112396273_112412193_112412318_112416156
transcript_826.known	chr1	+	2101	1	FSM	ENSG00000215014.5	ENST00000366221.3	2101	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTAACCATGTGCCT	4	True	NA	NA	False	AATAAA	-25	NA	1574974	1577075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1575000_1577100
transcript_82601.known	chr2	+	2926	10	FSM	ENSG00000170144.21	ENST00000677043.1	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_9	1300.8990433495	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGGTGAATATTTTGA	NA	False	NA	51	True	NA	NA	NA	177212723	177223898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177222059
transcript_82607.known	chr2	-	2651	5	FSM	ENSG00000116044.16	ENST00000397063.8	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	125.230786949536	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGATTCCTTTGA	1328	False	NA	-3	True	AATAAA	-24	NA	177263800	177230304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177263402
transcript_82608.known	chr2	-	2446	5	FSM	ENSG00000116044.16	ENST00000397062.8	2446	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	21.6491916708223	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTGGGATTCCTT	10	True	NA	-6	True	AATAAA	-21	NA	177264727	177230307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177264531
transcript_82612.known	chr2	-	889	5	FSM	ENSG00000213963.6	ENST00000430416.5	889	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.40254569624358	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGCATATGTTTTGTTT	NA	False	NA	-4	True	AATAAA	-25	NA	177323164	177283513	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_177283805_177287484_177287835_177310963_177311036_177311232_177311329_177323084
transcript_82613.known	chr2	+	7633	20	FSM	ENSG00000018510.18	ENST00000264167.11	7633	20	0	0	0	0	multi-exon	TRUE	canonical	3	385	junction_5	40.6303517676692	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTGTTATAGAAATTGT	7	True	NA	6	True	AATAAA	-16	NA	177392772	177543834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177538073
transcript_82615.known	chr2	-	315	3	FSM	ENSG00000249909.1	ENST00000504253.1	315	3	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCGGAAATATGTTATAAG	3828	False	NA	NA	False	NA	NA	NA	178104470	178092502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178092585_178092900_178092965_178104301
transcript_82618.nnic	chr2	+	1915	10	NNC	ENSG00000155636.15	novel	1803	10	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_9	33.1453961199835	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGACTTATTTATGTGAA	NA	False	NA	NA	False	AATAAA	-21	NA	178112362	178129656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121179_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129358
transcript_82619.known	chr2	+	1788	10	FSM	ENSG00000155636.15	ENST00000616198.4	1788	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	35.5089972948954	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGACTTATTTATGT	4	True	NA	NA	False	AATAAA	-18	NA	178112454	178129653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121173_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129396
transcript_82621.known	chr2	+	1992	9	FSM	ENSG00000155636.15	ENST00000424000.6	1992	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	16.7032930884901	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGACTTATTTATGTGAA	-27	True	NA	NA	False	AATAAA	-21	NA	178112423	178129656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121179_178121360_178123521_178123913_178124126_178124291_178125983_178126185_178129396
transcript_82626.known	chr2	-	1211	8	FSM	ENSG00000180228.14	ENST00000487082.5	1211	8	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_7	303.73995322261	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTATCTCCTCATA	9	True	NA	NA	False	NA	NA	NA	178450764	178431965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450561
transcript_82633.known	chr2	-	1793	7	FSM	ENSG00000180228.14	ENST00000676505.1	1793	7	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_5	369.008882759691	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-1	True	NA	-51	True	AATAAA	-12	NA	178450740	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450365
transcript_82634.known	chr2	-	1610	7	FSM	ENSG00000180228.14	ENST00000677689.1	1610	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	373.167820453777	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-9	True	NA	-51	True	AATAAA	-12	NA	178451157	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450965
transcript_82636.known	chr2	-	1546	7	FSM	ENSG00000180228.14	ENST00000678845.1	1546	7	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_6	292.820432271308	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	6	True	NA	-51	True	AATAAA	-12	NA	178451142	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450965
transcript_82641.known	chr2	-	1455	6	FSM	ENSG00000180228.14	ENST00000677981.1	1455	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	351.616836912	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	15	True	NA	-51	True	AATAAA	-12	NA	178451133	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178450965
transcript_82664.known	chr2	+	563	4	FSM	ENSG00000223960.8	ENST00000691078.1	1139	4	0	576	0	-112	multi-exon	FALSE	canonical	2	5	junction_2	9.20144916122817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCATTTCATTAATGA	-10	True	NA	NA	False	NA	NA	NA	178413944	178433515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178426365_178426506_178430769_178430890_178433381
transcript_82668.known	chr2	+	2776	4	FSM	ENSG00000223960.8	ENST00000663803.1	2776	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	9.67241208569794	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCTTGGGGAAAAAAAAAA	10	True	NA	NA	False	NA	NA	NA	178413676	178435210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178426365_178426681_178430694_178430890_178433381
transcript_82680.known	chr2	+	1049	3	FSM	ENSG00000223960.8	ENST00000436616.4	1365	3	316	0	1	0	multi-exon	FALSE	canonical	2	2	junction_1	11	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCATCAGCCACCT	15	True	NA	NA	False	AATAAA	-16	NA	178413969	178434091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178430694_178430890_178433381
transcript_82683.known	chr2	+	1057	3	FSM	ENSG00000223960.8	ENST00000661271.1	1057	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGTAGACAGTAATAAAT	186	False	NA	NA	False	NA	NA	NA	178413852	178434057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178430769_178430890_178433381
transcript_82684.known	chr2	-	1780	8	FSM	ENSG00000180228.14	ENST00000676922.1	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	295.382906114233	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-9	True	NA	-51	True	AATAAA	-12	NA	178451157	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241_178450412_178450965
transcript_82685.known	chr2	-	1999	8	FSM	ENSG00000180228.14	ENST00000677206.1	1999	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	375.1967103115	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	387	False	NA	-51	True	AATAAA	-12	NA	178450761	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241
transcript_82686.known	chr2	-	1717	8	FSM	ENSG00000180228.14	ENST00000677253.1	1717	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	436.021531016765	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	15	True	NA	-56	True	AATAAA	-7	NA	178451133	178431439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241_178450412_178450965
transcript_82687.known	chr2	-	1885	9	FSM	ENSG00000180228.14	ENST00000677584.1	1885	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	363.533698575524	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-4	True	NA	-51	True	AATAAA	-12	NA	178451152	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447455_178447587_178450241_178450412_178450965
transcript_82688.known	chr2	-	1713	9	FSM	ENSG00000180228.14	ENST00000676832.1	1713	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	382.676674883641	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-5	True	NA	-51	True	AATAAA	-12	NA	178451153	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450365_178450412_178450965
transcript_82689.known	chr2	-	1645	8	FSM	ENSG00000180228.14	ENST00000678053.1	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	352.514408447747	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	2	True	NA	-51	True	AATAAA	-12	NA	178451146	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450365_178450412_178450965
transcript_82690.known	chr2	-	1709	8	FSM	ENSG00000180228.14	ENST00000679037.1	1709	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	307.936184748644	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	2	True	NA	-51	True	AATAAA	-12	NA	178451146	178431434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447515_178447587_178450241_178450412_178450965
transcript_82691.known	chr2	-	1344	7	FSM	ENSG00000180228.14	ENST00000432031.6	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_2	107.959354491504	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACTCCAGATTTAATTA	391	False	NA	NA	False	NA	NA	NA	178450757	178431975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241
transcript_82692.known	chr2	+	1308	4	FSM	ENSG00000223960.8	ENST00000659708.2	1325	4	17	0	3	0	multi-exon	FALSE	canonical	1	1	junction_2	11.0855260988773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCACCTTTTCTTTTTT	-13	True	NA	NA	False	AATAAA	-26	NA	178413941	178434101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178426365_178426662_178430769_178430890_178433381
transcript_82693.known	chr2	+	662	4	FSM	ENSG00000223960.8	ENST00000415236.1	662	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.4243305140746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGTCCAATATGTATAAA	68	False	NA	NA	False	NA	NA	NA	178414022	178432282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178426365_178426704_178430769_178430890_178432169
transcript_82697.known	chr2	-	1030	5	FSM	ENSG00000079150.19	ENST00000233092.10	1030	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.1317035302793	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGAATGGTATGACT	1	True	NA	-14	True	AATAAA	-25	NA	178478575	178465598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178477061_178477214_178478278
transcript_827.known	chr1	-	1284	5	FSM	ENSG00000160075.12	ENST00000291386.4	1284	5	0	0	0	0	multi-exon	FALSE	canonical	3	1597	junction_2	89.6730171233242	4390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGCCTGGTCCTGAATTC	-8	True	NA	-5	True	AATAAA	-16	NA	1574863	1541672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1542168_1543868_1543988_1544862_1545003_1564772_1564917_1574477
transcript_82700.known	chr2	-	764	4	FSM	ENSG00000079150.19	ENST00000435079.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	37.7211994624891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTATTTTTCCCCTA	23	True	NA	-106	True	TATAAA	-25	NA	178478553	178465690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178478278
transcript_82701.known	chr2	-	666	4	FSM	ENSG00000079150.19	ENST00000434643.6	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	28.6472802664872	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTATTTCTACTTT	77	False	NA	NA	False	AATACA	-27	NA	178478499	178465769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178469651_178469783_178477061_178477214_178478278
transcript_82702.known	chr2	-	638	3	FSM	ENSG00000079150.19	ENST00000419184.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	31.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTATTTACTGTACTT	-19	True	NA	NA	False	NA	NA	NA	178478595	178465744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178469651_178469786_178478278
transcript_82703.known	chr2	-	1103	3	FSM	ENSG00000079150.19	ENST00000464248.1	1103	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATAGTTGTATATCTC	23	True	NA	NA	False	TATAAA	-40	NA	178478553	178465255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178477061_178477214_178478278
transcript_82704.known	chr2	-	555	2	FSM	ENSG00000079150.19	ENST00000685403.1	2545	2	-24	2014	0	-8	multi-exon	FALSE	canonical	3	13	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTATTTGCTATTT	-24	True	NA	-114	True	TATAAA	-17	NA	178478600	178465698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178478278
transcript_82705.nic	chr2	-	839	2	ISM	ENSG00000079150.19	ENST00000412612.1	526	5	-304	8911	-21	-8911	5prime_fragment	FALSE	canonical	3	63	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAAATGGAATATTATT	NA	False	NA	NA	False	NA	NA	NA	178478621	178476717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_178477214_178478278
transcript_82707.known	chr2	+	13892	8	FSM	ENSG00000116095.11	ENST00000234453.10	13892	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	8.53324829889604	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTGGGGGAAAATGTTT	-14	True	NA	12	True	AATAAA	-17	NA	178480456	178516463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178480910_178485640_178485758_178490658_178490815_178493852_178493990_178495495_178495661_178499210_178499255_178501060_178501177_178503759
transcript_82710.known	chr2	+	3002	5	FSM	ENSG00000237298.10	ENST00000657210.1	3002	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.65206734782504	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	178523166	178540779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523637_178531313_178531579_178535731_178535829_178537603_178537692_178538697
transcript_82712.known	chr2	+	651	5	FSM	ENSG00000237298.10	ENST00000585487.6	651	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.0679718105893	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCTTCTTTAATTTAA	NA	False	NA	1	True	AATAAA	-13	NA	178523182	178538903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523258_178523451_178523637_178535731_178535829_178537603_178537692_178538697
transcript_82715.known	chr2	+	2691	4	FSM	ENSG00000237298.10	ENST00000664161.1	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1.69967317119759	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	-8	True	NA	NA	False	NA	NA	NA	178523212	178540779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523637_178535731_178535829_178537603_178537692_178538697
transcript_82720.nic	chr2	+	854	3	ISM	ENSG00000237298.10	ENST00000657210.1	3002	5	23	4906	7	-1204	5prime_fragment	FALSE	canonical	2	12	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATAATTTAGCAACATC	-2	True	NA	NA	False	NA	NA	NA	178523189	178535873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_178523637_178531313_178531579_178535731
transcript_82724.nic	chr2	+	594	2	ISM	ENSG00000237298.10	ENST00000664161.1	2691	4	-28	4906	2	-1204	5prime_fragment	FALSE	canonical	3	26	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATAATTTAGCAACATC	NA	False	NA	NA	False	NA	NA	NA	178523184	178535873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_178523637_178535731
transcript_82725.known	chr2	+	587	2	FSM	ENSG00000237298.10	ENST00000592161.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTCTACTGAATTGT	-5	True	NA	NA	False	AATAAA	-3	NA	178523215	178527361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523637_178527195
transcript_82728.known	chr2	+	1956	2	FSM	ENSG00000237298.10	ENST00000582038.2	1956	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTGTTTGGTTGGTCA	1024	False	NA	NA	False	AATAAA	-20	NA	178776925	178779963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178778756_178779837
transcript_82729.known	chr2	+	861	2	FSM	ENSG00000237298.10	ENST00000442329.7	861	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACCCTGTGCGAGCG	-8	True	NA	NA	False	AATAAA	-17	NA	178523212	178531750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523637_178531313
transcript_8273.known	chr1	-	990	4	FSM	ENSG00000007341.19	ENST00000467335.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.6968012652072	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACGCAGTTTGTGATATT	NA	False	NA	-4	True	AATAAA	-17	NA	112619774	112610458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112611004_112616812_112616896_112618908_112619140_112619643
transcript_82731.known	chr2	+	675	1	FSM	ENSG00000270956.1	ENST00000604692.1	675	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGGGGTACATGTGCA	NA	False	NA	NA	False	ATTAAA	-16	NA	178541124	178541799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178541100_178541800
transcript_82741.nnic	chr2	-	460	3	NNC	ENSG00000163492.16	novel	2029	12	NA	NA	-1570	-131572	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	1.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTTCATGATCATGAACT	5326	False	NA	NA	False	NA	NA	NA	179051707	179047322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_179047407_179049839_179050067_179051558
transcript_82742.nnic	chr2	-	621	2	NNC	ENSG00000163492.16	novel	2029	12	NA	NA	-1570	-133844	at_least_one_novel_splicesite	FALSE	canonical	3	65	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAGAAAGAAAAA	5326	False	NA	NA	False	TTTAAA	-10	NA	179051707	179049594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_179050067_179051558
transcript_82743.known	chr2	-	10671	18	FSM	ENSG00000187231.14	ENST00000428443.8	10671	18	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_16	11.7811649572895	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGACATTCCTGTCTTT	-30	True	NA	NA	False	AATAAA	-33	NA	179264832	179101677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_179110029_179112723_179112846_179115064_179115257_179116667_179116791_179117531_179117614_179121769_179121930_179123714_179123830_179124363_179124559_179132303_179132427_179143591_179143804_179146401_179146458_179149296_179149395_179151277_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264498
transcript_82748.known	chr2	-	2610	8	FSM	ENSG00000144331.20	ENST00000336917.9	2610	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	12.2057196361679	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAATCTGTTTGT	-2	True	NA	-27	True	AATAAA	-6	NA	179562588	179441992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_179443469_179444875_179444978_179445549_179445729_179446524_179446771_179483271_179483435_179518527_179518639_179544826_179544970_179562398
transcript_82753.known	chr2	-	3524	20	FSM	ENSG00000163510.14	ENST00000410053.8	3524	20	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_19	75.3715818214026	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCAGTGATGTTTTTT	-19	True	NA	-8	True	AATAAA	-16	NA	180007297	179944875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180006866
transcript_82754.known	chr2	-	2392	20	FSM	ENSG00000163510.14	ENST00000404136.2	2392	20	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_13	34.9156482551132	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGACAAGAACACGG	-8	True	NA	-89	True	GATAAA	-40	NA	180007113	179945620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
transcript_8276.known	chr1	-	1857	10	FSM	ENSG00000007341.19	ENST00000480988.5	1857	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	36.2535651716396	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTTCTCTCTTATGGA	16	True	NA	-5	True	AATAAA	-20	NA	112619113	112525281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112526112_112541950_112542091_112550600_112550694_112576985_112577089_112578344_112578418_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112618908
transcript_82760.known	chr2	+	1555	6	FSM	ENSG00000170035.16	ENST00000410062.9	1555	6	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_1	95.4869624608512	2187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTCGTAATATT	-7	True	NA	15	True	AATAAA	-17	NA	180980604	181063425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_82763.known	chr2	+	1556	6	FSM	ENSG00000170035.16	ENST00000602710.5	1556	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	345.40156340121	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTCAGTCTTGTT	-1	True	NA	31	True	AATAAA	-33	NA	180981123	181063441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_180981478_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_8277.known	chr1	+	2358	10	FSM	ENSG00000116489.13	ENST00000263168.4	2358	10	0	0	0	0	multi-exon	FALSE	canonical	3	967	junction_9	99.3668847140625	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGAGTCTCTCCTTTT	5	True	NA	27	True	AATATA	-18	NA	112619831	112671616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112653597_112653662_112654464_112654672_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
transcript_82770.known	chr2	+	602	4	FSM	ENSG00000170035.16	ENST00000602475.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	353.214130835988	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAAGTATATTTGGGC	-11	True	NA	NA	False	AATAGA	-32	NA	180980806	180990046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_180989881
transcript_82771.known	chr2	+	2070	16	FSM	ENSG00000115232.14	ENST00000233573.6	2070	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1.27540843131393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGGAATATTTTCCTTT	42	True	NA	NA	False	AAAAAG	-16	NA	181457427	181509805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_181457852_181458195_181458318_181474959_181475067_181475158_181475289_181478756_181478825_181480136_181480267_181481597_181481684_181482359_181482423_181482513_181482652_181485880_181485993_181493324_181493420_181494721_181494813_181495370_181495417_181495782_181495938_181498622_181498778_181509657
transcript_82772.known	chr2	+	592	3	FSM	ENSG00000115232.14	ENST00000484404.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCATGATTTTGATACGA	88	False	NA	NA	False	AGTAAA	-25	NA	181457712	181475290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_181457852_181458195_181458318_181474959
transcript_82773.known	chr2	+	6781	28	FSM	ENSG00000115232.14	ENST00000397033.7	6781	28	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_19	1.79008088497697	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCATGTCTCTTTATG	0	True	NA	NA	False	AATAAA	-28	NA	181457385	181538940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_181457852_181458195_181458318_181474959_181475067_181475158_181475289_181478756_181478825_181480136_181480267_181481597_181481684_181482359_181482423_181482513_181482652_181485880_181485993_181493324_181493420_181494721_181494813_181495370_181495417_181495782_181495938_181498622_181498778_181509657_181509808_181511698_181511776_181522190_181522342_181523436_181523533_181524170_181524251_181525201_181525292_181527296_181527388_181529540_181529649_181530523_181530650_181531656_181531777_181534271_181534371_181534815_181534936_181535431
transcript_82777.known	chr2	+	501	4	FSM	ENSG00000150722.11	ENST00000479855.1	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.35412613473634	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACAGTGATTCTTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	182030882	182117511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182030980_182061441_182061480_182063730_182063792_182117206
transcript_8278.known	chr1	-	752	2	FSM	ENSG00000007341.19	ENST00000470683.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	18	True	NA	0	True	AATAAA	-21	NA	112619111	112610454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112611004_112618908
transcript_82787.known	chr2	+	20144	24	FSM	ENSG00000077232.19	ENST00000264065.12	20144	24	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_11	69.7077615670186	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-18	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_8279.known	chr1	-	685	4	FSM	ENSG00000007341.19	ENST00000498383.5	685	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	62.230753383409	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	18	True	NA	0	True	AATAAA	-21	NA	112619111	112610454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112610691_112610840_112611004_112616812_112616896_112618908
transcript_82792.known	chr2	+	20086	24	FSM	ENSG00000077232.19	ENST00000680258.1	20086	24	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	154.878158099626	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-20	True	NA	NA	False	AATAAA	-20	NA	182716254	182794464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743657_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_82794.known	chr2	+	20006	23	FSM	ENSG00000077232.19	ENST00000616986.5	20006	23	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_10	139.93705786992	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	-18	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_828.known	chr1	-	4176	2	FSM	ENSG00000160075.12	ENST00000359060.5	4176	2	0	0	0	0	multi-exon	FALSE	canonical	3	1754	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATTTATTATTATTA	-2	True	NA	-5	True	AATAAA	-31	NA	1574584	1560847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1564917_1574477
transcript_8280.known	chr1	+	739	3	FSM	ENSG00000116489.13	ENST00000485542.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_1	45	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAATCTAAACTTG	21	False	NA	NA	False	NA	NA	NA	112619804	112650013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112619884_112647209_112647274_112649417
transcript_82802.known	chr2	+	19812	23	FSM	ENSG00000077232.19	ENST00000679884.1	19812	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	160.510349554319	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	41	True	NA	NA	False	AATAAA	-20	NA	182716315	182794464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182716484_182718156_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_82805.nic	chr2	+	1538	12	ISM	ENSG00000077232.19	ENST00000680480.1	21035	25	-25	54823	-22	-565	5prime_fragment	FALSE	canonical	3	43	junction_11	191.675431587828	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTTTTATACTCGTTTG	-42	True	NA	NA	False	AATAAA	-16	NA	182716232	182739641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182739544
transcript_8281.known	chr1	-	1866	14	FSM	ENSG00000007341.19	ENST00000343210.11	1866	14	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_2	30.0959019404547	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGATTTGAGCTAC	506	False	NA	-18	True	CATAAA	-16	NA	112619189	112541789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
transcript_82814.known	chr2	-	2637	6	FSM	ENSG00000162998.5	ENST00000295113.5	2637	6	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_4	26.20381651592	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTATGTTTCCTTCTA	4	True	NA	0	True	AATAAA	-19	NA	182866637	182833274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_182834966_182837947_182838012_182838408_182838614_182842477_182842544_182858785_182858834_182866074
transcript_8282.known	chr1	+	3552	21	FSM	ENSG00000155363.19	ENST00000369645.6	3380	21	-172	0	66	0	multi-exon	FALSE	canonical	3	194	junction_1	122.387856832285	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	8	True	NA	32	True	AAGAAA	-33	NA	112674486	112700739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112674730_112674847_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_82823.known	chr2	+	5191	4	FSM	ENSG00000162999.13	ENST00000354221.5	5191	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1.24721912892465	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGGAAGACACACAATT	-7	True	NA	NA	False	NA	NA	NA	183078746	183100008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183079160_183083507_183083555_183087039_183087193_183095430
transcript_82825.known	chr2	+	726	4	FSM	ENSG00000162999.13	ENST00000469344.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.11805216802087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGTAATCATTGCTTT	202	False	NA	NA	False	ATTAAA	-34	NA	183078988	183095903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183079160_183083507_183083555_183087157_183087193_183095430
transcript_82826.nic	chr2	+	576	3	ISM	ENSG00000162999.13	ENST00000354221.5	5191	4	37	12816	37	-8707	5prime_fragment	FALSE	canonical	3	15	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTGTTTTGATCCA	-3	True	NA	NA	False	AAAAAG	-5	NA	183078783	183087192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_183079160_183083507_183083555_183087039
transcript_82827.known	chr2	+	1117	3	FSM	ENSG00000162999.13	ENST00000342619.10	1117	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	7.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGTTAGTAATCATTG	120	False	NA	NA	False	ATTAAA	-30	NA	183078558	183095899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183079160_183083507_183083555_183095430
transcript_8283.known	chr1	+	3641	21	FSM	ENSG00000155363.19	ENST00000413052.6	3641	21	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_1	142.834134575738	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGTCTCCTCTGCCTGGC	3705	False	NA	39	True	AAGAAA	-40	NA	112674420	112700746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112674730_112674831_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_82832.known	chr2	+	1545	9	FSM	ENSG00000163002.13	ENST00000295119.9	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	28.8593030927637	1038	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAGTCTGTTTGCA	2	True	NA	27	True	AATAAA	-15	NA	183124442	183161680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183151507_183151650_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_8285.known	chr1	+	3383	20	FSM	ENSG00000155363.19	ENST00000357443.2	3383	20	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_4	98.5213111639436	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAACAAAATCTTGTTC	11	False	NA	3	True	AAGAAA	-4	NA	112674744	112700710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_82850.nnic	chr2	+	2374	4	NNC	ENSG00000286797.1	novel	3314	4	NA	NA	-61	-19768	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	15.5134350376268	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTAGTCTCAGATCGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	185425001	185485840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_185425508_185434096_185434192_185483033_185483092_185484125
transcript_82853.nnic	chr2	+	1256	4	NNC	ENSG00000286797.1	novel	3314	4	NA	NA	-127	75138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.5730705262081	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGATGTTAAACTGCGAA	NA	False	NA	5	True	AATAAA	-17	NA	185424935	185580746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_185425508_185434096_185434192_185483033_185483092_185580215
transcript_82864.nic	chr2	+	1177	3	ISM	ENSG00000286797.1	ENST00000671641.1	3314	4	-357	22065	-127	-22065	5prime_fragment	FALSE	canonical	2	14	junction_2	13	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAACAAAAAAAAACAGTCC	NA	False	NA	NA	False	AATAAA	-5	NA	185424935	185483543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_185425508_185434096_185434192_185483033
transcript_82867.nnic	chr2	+	1112	3	NNC	ENSG00000286797.1	novel	3314	4	NA	NA	-78	75138	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGATGTTAAACTGCGAA	NA	False	NA	5	True	AATAAA	-17	NA	185424984	185580746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_185425508_185483033_185483092_185580215
transcript_82878.nic	chr2	+	787	2	ISM	ENSG00000188738.16	ENST00000424728.6	20879	23	-14	93362	-14	-3366	5prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACTGAAACAGTGGG	-2	True	NA	NA	False	CATAAA	-8	NA	185738789	185739928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_185738994_185739345
transcript_82884.known	chr2	+	2032	10	FSM	ENSG00000065548.18	ENST00000337859.11	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_6	73.4737712502114	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCTTTTTTTAAGTT	-36	True	NA	29	True	AATAAA	-37	NA	186486259	186509361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031_186504215_186505450_186505598_186505739_186505842_186506712_186506837_186508542
transcript_82896.nic	chr2	+	931	6	ISM	ENSG00000065548.18	ENST00000337859.11	2032	10	-139	5195	-132	67	5prime_fragment	FALSE	canonical	3	488	junction_4	79.8884221899519	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAGAAGATGAAAT	NA	False	NA	NA	False	GATAAA	-7	NA	186486120	186504166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031
transcript_829.nic	chr1	+	538	3	NIC	ENSG00000197530.13	novel	592	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	NA	False	NA	16	True	AATAAA	-27	NA	1615448	1617323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_1615634_1616507_1616615_1617077
transcript_82903.known	chr2	+	304	2	FSM	ENSG00000065548.18	ENST00000477672.1	304	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATCCACGTCAGGTAAG	-29	True	NA	NA	False	NA	NA	NA	186486266	186495319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_186486458_186495206
transcript_82912.known	chr2	-	6112	15	FSM	ENSG00000064989.13	ENST00000392370.8	6112	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	4.72779449810655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTTTGCAAGTTTTTG	0	True	NA	-16	True	TATAAA	-16	NA	187448252	187341963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187346400_187351919_187351962_187352113_187352333_187359062_187359130_187359211_187359273_187360597_187360752_187363375_187363503_187378939_187379032_187380466_187380580_187380676_187380788_187383172_187383306_187385544_187385632_187387328_187387494_187387665_187387757_187448038
transcript_82913.known	chr2	-	5223	16	FSM	ENSG00000064989.13	ENST00000409998.5	5223	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	6.51016299505797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAAAAAGTCATGATTT	NA	False	NA	NA	False	AATAAA	-5	NA	187448460	187343128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187346400_187351919_187351962_187352113_187352333_187359062_187359130_187359211_187359273_187360597_187360752_187363375_187363503_187378939_187379032_187380466_187380580_187380676_187380788_187383172_187383306_187385544_187385632_187387328_187387494_187387665_187387757_187431296_187431365_187448038
transcript_82914.known	chr2	-	729	3	FSM	ENSG00000064989.13	ENST00000479784.1	729	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGACTTGTCATTT	-3	True	NA	NA	False	ATTAAA	-25	NA	187448146	187428336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187428890_187431296_187431365_187448038
transcript_82916.nnic	chr2	+	861	3	Genic_Genomic	ENSG00000231739.2	novel	267	1	NA	NA	-5671	468	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATTCAGCACTTATAAT	NA	False	NA	NA	False	AATAAA	-42	NA	187409880	187416286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_187409938_187411141_187411203_187415543
transcript_82929.known	chr2	-	3859	8	FSM	ENSG00000003436.16	ENST00000233156.9	3859	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	36.9815177225222	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	13	True	NA	NA	False	AGTAAA	-24	NA	187554435	187464229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
transcript_82938.nic	chr2	-	781	3	ISM	ENSG00000003436.16	ENST00000421427.5	804	5	-109	32294	-109	-32159	5prime_fragment	FALSE	canonical	3	23	junction_2	1	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGCAGCATTCTTACC	NA	False	NA	NA	False	AATAAA	-18	NA	187565869	187529174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_187529486_187554199_187554350_187565549
transcript_8294.known	chr1	-	1026	6	FSM	ENSG00000155366.17	ENST00000369632.6	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	317.058101930861	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCCCTCCCTTCACAG	8396	False	NA	NA	False	GGGGCT	-35	NA	112707079	112701519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706731
transcript_82941.nnic	chr2	-	894	3	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-43	-60967	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-1	True	NA	-7	True	AATAAA	-16	NA	187565803	187557982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_187558398_187560648_187560874_187565549
transcript_82943.nnic	chr2	-	728	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-96	-60961	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-1	True	AATAAA	-22	NA	187565856	187557976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_187558398_187565549
transcript_82945.nnic	chr2	-	587	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-192	-63674	at_least_one_novel_splicesite	FALSE	canonical	3	80	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCCTAATCCCTTCC	NA	False	NA	-10	True	AATAAA	-16	NA	187565952	187560689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_187560874_187565549
transcript_82946.known	chr2	-	3649	8	FSM	ENSG00000003436.16	ENST00000392365.5	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	26.9640728468419	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTGTTGTACTCGTAA	6978	False	NA	NA	False	AGTAAA	-24	NA	187513641	187464229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615
transcript_82947.known	chr2	-	7690	7	FSM	ENSG00000003436.16	ENST00000481132.5	7690	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	23.079572497485	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAGAAGCA	759	False	NA	NA	False	ATTAAA	-4	NA	187519860	187467001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187467043_187467752_187467933_187484123_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187513615
transcript_82948.known	chr2	-	1088	7	FSM	ENSG00000003436.16	ENST00000339091.8	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	54.5356662092698	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAAACATAGTCTTCTCA	10	True	NA	NA	False	AATAAA	-20	NA	187554438	187478584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187478804_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199
transcript_8295.known	chr1	-	866	6	FSM	ENSG00000155366.17	ENST00000425265.6	866	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	318.307147265028	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCCATTCTCTGAGATC	8419	False	NA	NA	False	NA	NA	NA	112707056	112701555	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706832
transcript_82988.known	chr2	+	2643	13	FSM	ENSG00000144366.16	ENST00000409843.5	2643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	245.080754831727	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	-2	True	NA	36	True	NA	NA	NA	188291668	188595059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_830.nnic	chr1	+	661	3	NNC	ENSG00000197530.13	novel	2821	2	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	12	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	NA	False	NA	16	True	AATAAA	-27	NA	1615448	1617323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_1615634_1616507_1616738_1617077
transcript_8300.known	chr1	-	1117	6	FSM	ENSG00000155366.17	ENST00000339083.12	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	289.285602821848	3120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	-1	True	NA	-34	True	AATAAA	-16	NA	112707127	112701130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112707077
transcript_83007.known	chr2	+	3294	12	FSM	ENSG00000144366.16	ENST00000409830.6	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	133.183400549086	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	-11	True	NA	NA	False	AATAAA	-15	NA	188291873	188595926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_8301.known	chr1	-	420	3	FSM	ENSG00000155366.17	ENST00000478447.1	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	71	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCTGGATATACTTT	12	True	NA	NA	False	AGTAAA	-26	NA	112707114	112703492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112703807_112705099_112705169_112707077
transcript_83017.known	chr2	+	3347	12	FSM	ENSG00000144366.16	ENST00000359135.7	3347	12	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	110.391115344974	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAATTCATTTGTTAA	-6	True	NA	NA	False	AATAAA	-20	NA	188292771	188595931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_83033.known	chr2	+	983	9	FSM	ENSG00000144366.16	ENST00000409805.5	983	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	230.193396951346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTCATGTGTCAATGT	10	True	NA	NA	False	NA	NA	NA	188292039	188594090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_8304.known	chr1	-	702	5	FSM	ENSG00000215866.9	ENST00000449572.2	702	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1491.89309268459	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCACTACCTACCCAAAT	4286	False	NA	-139	True	NA	NA	NA	112849777	112820289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112840487_112840581_112849679
transcript_83054.known	chr2	+	1595	7	FSM	ENSG00000144366.16	ENST00000410051.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	173.955933117174	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTAAAATAATGAAAGT	20	False	NA	NA	False	NA	NA	NA	188291945	188542122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_83066.known	chr2	+	1242	7	FSM	ENSG00000144366.16	ENST00000409637.7	1242	7	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	140.061196942226	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAAATAAATATTCTT	15	False	NA	-25	True	NA	NA	NA	188292838	188541716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_8307.known	chr1	-	767	4	FSM	ENSG00000215866.9	ENST00000433505.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1454.33635113141	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	4248	False	NA	-19	True	AATAAA	-23	NA	112849815	112820169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112849679
transcript_831.known	chr1	+	486	3	FSM	ENSG00000197530.13	ENST00000463492.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	36	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	77	False	NA	16	True	AATAAA	-27	NA	1615967	1617323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1616101_1616507_1616615_1617077
transcript_83109.known	chr2	+	583	6	FSM	ENSG00000144366.16	ENST00000409927.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	249.947674524089	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAGTTGCAAATATCAA	-16	True	NA	NA	False	AAGAAA	-24	NA	188292013	188529140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292220_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096
transcript_83110.known	chr2	-	6829	54	FSM	ENSG00000204262.14	ENST00000374866.9	6829	54	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_51	54.7598205753836	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTCTCAAATTTC	0	True	NA	-4	True	AATAAA	-16	NA	189179761	189031897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189034217_189034915_189035156_189036615_189036804_189039271_189039564_189041585_189041694_189042719_189042774_189043150_189043259_189045178_189045233_189045799_189045908_189048208_189048263_189049346_189049455_189050568_189050677_189051319_189051482_189052171_189052226_189052748_189052803_189052910_189053019_189053423_189053478_189053894_189053949_189054158_189054213_189056972_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009_189063064_189063171_189063271_189063979_189064034_189064556_189064656_189065003_189065058_189066389_189066498_189066728_189066783_189068014_189068114_189068225_189068271_189068785_189068885_189072039_189072094_189075392_189075438_189078515_189078570_189079062_189079108_189079977_189080032_189080989_189081044_189083983_189084038_189085159_189085214_189085718_189085773_189086725_189086771_189088694_189088773_189092309_189092421_189097276_189097331_189098726_189098760_189100106_189100140_189104263_189104278_189110224_189110450_189179507
transcript_83112.nic	chr2	-	1857	2	ISM	ENSG00000204262.14	ENST00000618828.1	6399	47	-5	77055	-5	-23800	5prime_fragment	FALSE	canonical	3	171	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAATAAAGTAATTCTCTT	NA	False	NA	NA	False	NA	NA	NA	189179884	189108969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_189110450_189179507
transcript_83113.known	chr2	-	6399	47	FSM	ENSG00000204262.14	ENST00000618828.1	6399	47	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_32	65.057383424145	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTGCCCAGACCATTC	NA	False	NA	-21	True	NA	NA	NA	189179879	189031914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189034217_189034915_189035156_189036615_189036804_189039271_189039564_189041585_189041694_189042719_189042774_189043150_189043259_189045178_189045233_189045799_189045908_189048208_189048263_189049346_189049455_189050568_189050677_189051319_189051482_189052171_189052226_189052748_189052803_189052910_189053019_189053423_189053478_189053894_189053949_189054158_189054213_189056972_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009_189063064_189063171_189063271_189063979_189064034_189064556_189064656_189065003_189065058_189066389_189066434_189079079_189079108_189079977_189080032_189080989_189081044_189083983_189084038_189085159_189085214_189085718_189085773_189086725_189086771_189088694_189088773_189092309_189092421_189097276_189097331_189098726_189098760_189100106_189100140_189104263_189104278_189110224_189110450_189179507
transcript_83117.known	chr2	+	2647	21	FSM	ENSG00000115368.10	ENST00000314761.9	2647	21	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_16	39.6382075780427	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	0	True	NA	26	True	AATAAA	-29	NA	189441473	189475552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
transcript_83129.known	chr2	+	706	5	FSM	ENSG00000115368.10	ENST00000472286.5	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_4	38.4252521136817	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATCCTTATTTTTGTGTG	-12	True	NA	NA	False	NA	NA	NA	189441461	189455621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319
transcript_83130.known	chr2	+	552	4	FSM	ENSG00000115368.10	ENST00000475596.1	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_3	26.8369562771605	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTATGAATTCTGAAAT	-6	True	NA	NA	False	TTTAAA	-35	NA	189441467	189452049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804
transcript_8314.known	chr1	+	587	3	FSM	ENSG00000224167.3	ENST00000456651.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTAGTAATATGAGTGT	170	False	NA	24	True	AATAAA	-16	NA	112850027	112877871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112850428_112876939_112876985_112877729
transcript_83141.known	chr2	-	3330	8	FSM	ENSG00000138449.11	ENST00000261024.7	3330	8	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_3	51.5957599903286	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCCTGAATTCTGTTCC	-2	True	NA	-9	True	TATAAA	-20	NA	189580786	189560589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189562192_189563583_189564226_189565353_189565600_189571714_189571842_189572845_189572962_189575160_189575321_189579812_189579881_189580417
transcript_83145.known	chr2	-	993	4	FSM	ENSG00000138449.11	ENST00000479598.5	993	4	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_2	34.1207007873845	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGTCAGTCATAATTGC	3223	False	NA	NA	False	AATAAA	-16	NA	189580741	189572520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189572962_189575160_189575321_189579812_189579881_189580417
transcript_83146.nic	chr2	-	2643	2	ISM	ENSG00000138449.11	ENST00000427419.5	299	3	1227	-2232	-9	2232	3prime_fragment	FALSE	canonical	3	658	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGATACTATTGTCAAGGA	3169	False	NA	NA	False	NA	NA	NA	189580795	189577615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_189579881_189580417
transcript_83149.known	chr2	+	2411	6	FSM	ENSG00000138381.10	ENST00000260952.9	2411	6	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_5	53.777318638995	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	-14	True	NA	67	True	TTTAAA	-6	NA	189661458	189670831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040_189667597_189667763_189667946_189670440
transcript_83152.nic	chr2	+	2445	6	NIC	ENSG00000138381.10	novel	2411	6	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_2	165.723142620456	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	NA	False	NA	67	True	TTTAAA	-6	NA	189661378	189670831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040_189667597_189667763_189667946_189670440
transcript_83156.known	chr2	+	643	4	FSM	ENSG00000286053.2	ENST00000607829.6	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	50.5459087255229	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	-14	True	NA	19	True	AATAAA	-19	NA	189661458	189666401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040
transcript_83157.known	chr2	+	535	4	FSM	ENSG00000286053.2	ENST00000607690.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	203.201596669143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	48	True	NA	19	True	AATAAA	-19	NA	189661520	189666401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040
transcript_83159.known	chr2	+	573	4	FSM	ENSG00000286053.2	ENST00000605941.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	243.738019648602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTACCCAGCCTG	-21	True	NA	-77	True	NA	NA	NA	189661451	189666305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189661611_189663900_189663955_189665356_189665452_189666040
transcript_83163.nnic	chr2	-	2464	10	NNC	ENSG00000128694.12	novel	1910	9	NA	NA	-1	0	intron_retention	FALSE	canonical	2	4	junction_1	40.3487879787984	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	27	False	NA	-7	True	AATAAA	-18	NA	189763199	189746659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_189747169_189747934_189748082_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_83172.known	chr2	-	1910	9	FSM	ENSG00000128694.12	ENST00000264151.10	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	26.6493433314969	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-14	True	NA	-7	True	AATAAA	-18	NA	189762792	189746659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_83174.nic	chr2	-	2242	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	9	junction_8	33.3757022398031	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	418	False	NA	-7	True	AATAAA	-18	NA	189762808	189746659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762531
transcript_83175.nic	chr2	-	2194	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-2	0	intron_retention	FALSE	canonical	3	12	junction_8	32.488219018592	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-17	True	NA	-7	True	AATAAA	-18	NA	189762795	189746659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762566
transcript_83176.nic	chr2	-	2480	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	67	junction_1	18.0481127822274	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	27	False	NA	-7	True	AATAAA	-18	NA	189763199	189746659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_83193.known	chr2	-	914	4	FSM	ENSG00000128694.12	ENST00000517895.5	914	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	41.2499158248299	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATAGAACATTTGGCCA	-14	True	NA	NA	False	AATAAA	-34	NA	189762792	189754286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189754346_189755172_189755561_189761419_189761661_189762566
transcript_83194.known	chr2	-	1779	8	FSM	ENSG00000128694.12	ENST00000522700.5	1779	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	15.4431148386058	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGCTGTTCAAAAAAGT	28	False	NA	NA	False	ATTAAA	-14	NA	189763198	189750577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_83197.known	chr2	+	508	3	FSM	ENSG00000253559.1	ENST00000520651.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGTATTATTTATGA	7697	False	NA	NA	False	AATAAA	-22	NA	189762703	189765556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189762993_189764854_189764976_189765458
transcript_83199.known	chr2	-	1596	3	FSM	ENSG00000128694.12	ENST00000518114.1	1596	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	15.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGCTCCACCATGAGT	-15	True	NA	NA	False	AATAAA	-6	NA	189762793	189754314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189755561_189761419_189761661_189762684
transcript_832.known	chr1	+	2821	2	FSM	ENSG00000197530.13	ENST00000477990.1	2821	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAGAAAAAATGAGC	3	True	NA	NA	False	NA	NA	NA	1615515	1619210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1615634_1616507
transcript_83202.known	chr2	+	544	2	FSM	ENSG00000253559.1	ENST00000521819.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGAACTTTATTAGTATA	7814	False	NA	NA	False	NA	NA	NA	189762820	189765226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189762993_189764854
transcript_8321.known	chr1	+	490	2	FSM	ENSG00000224167.3	ENST00000422022.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTGCTAGTAATATGA	218	False	NA	20	True	AATAAA	-12	NA	112850075	112877867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112850428_112877729
transcript_83213.known	chr2	+	3156	13	FSM	ENSG00000064933.19	ENST00000441310.7	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_10	44.7911046476368	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	-43	True	NA	28	True	AATAAA	-18	NA	189784449	189877629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_8322.nnic	chr1	-	719	2	NIC	ENSG00000215866.9	novel	700	3	NA	NA	-124	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_1	0	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTGGTGGTCTCT	NA	False	NA	-22	True	AATAAA	-20	NA	112825865	112820172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_112820539_112825512
transcript_83222.known	chr2	+	2576	12	FSM	ENSG00000064933.19	ENST00000447232.6	2576	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	127.452729853493	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	51	True	NA	28	True	AATAAA	-18	NA	189784543	189877629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189867798_189867930_189873495_189873657_189877271
transcript_83229.known	chr2	+	2795	12	FSM	ENSG00000064933.19	ENST00000409823.7	2795	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	122.929463077661	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATATGTTTAAGAAGAT	8	True	NA	-4	True	NA	NA	NA	189784500	189877436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_8323.known	chr1	-	1222	3	FSM	ENSG00000215866.9	ENST00000667852.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	1461	junction_1	1046.5	4661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGAACCTGTTTGGTGG	NA	False	NA	-27	True	AATAAA	-15	NA	112826268	112820177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112820542_112823652_112823755_112825512
transcript_83232.known	chr2	+	3012	12	FSM	ENSG00000064933.19	ENST00000342075.8	3012	12	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	121.475841899899	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGATTCTCAAGAACCA	-4	True	NA	26	True	AATAAA	-16	NA	189784488	189877627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_83235.known	chr2	+	3018	11	FSM	ENSG00000064933.19	ENST00000418224.7	3018	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	170.216479813207	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTCTCAAGAACCAA	NA	False	NA	27	True	AATAAA	-17	NA	189784084	189877628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189863975_189873495_189873657_189877271
transcript_8326.known	chr1	-	4374	5	FSM	ENSG00000155380.13	ENST00000538576.5	4374	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	646.91860964112	1675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAACTTTTTCCTCAT	276	False	NA	-19	True	AATAAA	-13	NA	112956063	112911851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112955275
transcript_83261.known	chr2	+	3234	11	FSM	ENSG00000064933.19	ENST00000432292.7	3234	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	133.672136213947	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTCTCAAGAACCAA	NA	False	NA	27	True	AATAAA	-17	NA	189784084	189877628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_83277.known	chr2	+	948	5	FSM	ENSG00000064933.19	ENST00000374826.8	948	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	189.584249082037	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCATGTTCAAAATAATT	15	True	NA	NA	False	ATTAAA	-16	NA	189784507	189806846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189806422
transcript_83282.known	chr2	-	2150	5	FSM	ENSG00000128699.14	ENST00000392349.9	2150	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	502.831171965303	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAACTGAATTCG	-13	True	NA	41	True	ATTAAA	-20	NA	189784339	189770266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189784268
transcript_83289.nnic	chr2	-	1204	5	NNC	ENSG00000128699.14	novel	2150	5	NA	NA	268	-3	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	531.025893907256	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATATTTCTCGTTTTAT	543	False	NA	-6	True	ATTAAA	-17	NA	189784050	189771313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189783878
transcript_83299.known	chr2	+	1882	4	FSM	ENSG00000064933.19	ENST00000409985.5	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_3	38.5054108751831	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGTCTTCATTTCA	-43	True	NA	25	True	ATTAAA	-23	NA	189784449	189807054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651
transcript_833.known	chr1	-	2534	21	FSM	ENSG00000248333.9	ENST00000340677.9	2534	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_19	51.8785842135269	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	-25	True	NA	NA	False	NA	NA	NA	1659012	1635737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_83300.known	chr2	+	3417	12	FSM	ENSG00000064933.19	ENST00000624204.3	3417	12	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	121.475841899899	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTCTCAAGAACCAA	NA	False	NA	27	True	AATAAA	-17	NA	189784084	189877628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_83317.known	chr2	-	2009	4	FSM	ENSG00000128699.14	ENST00000392350.7	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_3	236.114849643605	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	2	True	NA	-15	True	AATAAA	-23	NA	189784364	189770322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189784268
transcript_83318.known	chr2	-	1223	3	FSM	ENSG00000128699.14	ENST00000409519.5	1223	3	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_2	262	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGACAAATAAAAAAATGT	8	True	NA	NA	False	NA	NA	NA	189784318	189774724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189775717_189782421_189782603_189784268
transcript_83319.known	chr2	+	2817	13	FSM	ENSG00000064933.19	ENST00000450931.5	2817	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	203.19448811422	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGATTCTCAAGAACCA	20	True	NA	26	True	AATAAA	-16	NA	189784512	189877627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784565_189785345_189785472_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189863975_189867798_189867930_189873495_189873657_189877271
transcript_83320.known	chr2	+	1468	6	FSM	ENSG00000064933.19	ENST00000618056.4	1468	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	179.538965130135	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTCTCAAGAACCAA	NA	False	NA	27	True	AATAAA	-17	NA	189784084	189877628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189877271
transcript_83321.known	chr2	+	570	2	FSM	ENSG00000187699.10	ENST00000409545.2	570	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGTGTGATGCCTTGC	NA	False	NA	NA	False	NA	NA	NA	190150245	190200063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_190150449_190199696
transcript_83328.known	chr2	-	2434	14	FSM	ENSG00000198130.16	ENST00000359678.10	2434	14	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_10	36.0223467788486	1811	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTTCTCCTTCATCCC	0	True	NA	NA	False	AATAAA	-16	NA	190319826	190203919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_83330.known	chr2	+	1919	6	FSM	ENSG00000151689.13	ENST00000322522.8	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.9496835316263	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCATGCCTGTAA	-52	True	NA	NA	False	AATAAA	-14	NA	190343569	190371665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_190343962_190360038_190360307_190362626_190362688_190366694_190366896_190369102_190369278_190370843
transcript_83332.known	chr2	-	430	1	FSM	ENSG00000272979.1	ENST00000609166.1	430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGCGAGGCCTACAAT	5517	False	NA	NA	False	AATAAA	-18	NA	190454521	190454091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190454100_190454500
transcript_83334.known	chr2	-	6172	9	FSM	ENSG00000189362.12	ENST00000409150.8	6172	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	5.26782687642637	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTTGGGGAAATGAGA	2	True	NA	NA	False	AATAAA	-15	NA	190534722	190504337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190509313_190510360_190510538_190514452_190514679_190516269_190516385_190517519_190517614_190518735_190518809_190518951_190519184_190525262_190525379_190534558
transcript_83338.known	chr2	-	3937	25	FSM	ENSG00000115415.20	ENST00000673942.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	52.9821117611092	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATATAATATGCACAC	19	True	NA	-50	True	ATTAAA	-20	NA	191014161	190969311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986942_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_83340.known	chr2	-	2716	23	FSM	ENSG00000115415.20	ENST00000392322.7	2716	23	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_10	23.7091972250823	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGGAAAGTAGTTCT	12	True	NA	-3	True	AATAAA	-17	NA	191014168	190975536	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_83342.known	chr2	-	2723	24	FSM	ENSG00000115415.20	ENST00000392323.6	2723	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	70.7434460616708	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCCAA	-17	True	NA	-108	True	NA	NA	NA	191014197	190975641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191010366_191010450_191013524_191013679_191014017
transcript_83344.known	chr2	-	2560	24	FSM	ENSG00000138378.19	ENST00000392320.7	2560	24	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_11	5.2932885422658	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTGCCTGTGTTTGGT	2	True	NA	-10	True	AAGAAA	-30	NA	191150994	191029575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_191029867_191030971_191031081_191031449_191031517_191032957_191033150_191033489_191033627_191033910_191034006_191034547_191034598_191036163_191036300_191039198_191039298_191041064_191041149_191054489_191054535_191058017_191058112_191058201_191058220_191058709_191058770_191061728_191061822_191062761_191062921_191064806_191064959_191066429_191066516_191069692_191069772_191073097_191073191_191076226_191076326_191146612_191146758_191148075_191148205_191150946
transcript_83346.known	chr2	-	645	4	FSM	ENSG00000138378.19	ENST00000495326.1	645	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.34209919681348	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTAGTTGGCTATG	-19	True	NA	NA	False	NA	NA	NA	191151015	191076023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_191076326_191146612_191146758_191148075_191148205_191150946
transcript_83353.known	chr2	+	1914	7	FSM	ENSG00000173559.15	ENST00000307834.9	1914	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.92751507455695	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACGTAATTTTTGCCCTT	-9	True	NA	7	True	AATAAA	-22	NA	191678126	191686939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191682491_191682596_191683728_191683805_191684229_191684297_191685598
transcript_83355.known	chr2	+	2269	6	FSM	ENSG00000173559.15	ENST00000425611.9	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.3081318457076	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTTTTGCCCTTTCAA	0	True	NA	11	True	AATAAA	-26	NA	191678135	191686943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_83357.known	chr2	+	11524	6	FSM	ENSG00000173559.15	ENST00000410026.7	11524	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.57904423581089	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATTTTGCTTTTATTT	0	True	NA	NA	False	AATAAA	-14	NA	191678135	191696662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_8336.known	chr1	+	742	3	FSM	ENSG00000226419.8	ENST00000416193.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	9	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	-10	True	NA	0	True	AATAAA	-15	NA	112956414	112964072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112956957_112960476_112960576_112963971
transcript_83361.known	chr2	+	915	5	FSM	ENSG00000173559.15	ENST00000435931.1	915	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.295630140987	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCATCAAAAAACACAAGAAC	10	True	NA	NA	False	ACTAAA	-8	NA	191678989	191686177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_191679129_191681945_191682018_191683728_191683805_191684229_191684279_191685598
transcript_83362.known	chr2	-	2799	10	FSM	ENSG00000144339.12	ENST00000272771.10	2799	10	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_5	7.4103697780147	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGCGTGGACTTTA	-10	True	NA	NA	False	AATAAA	-22	NA	192194933	191949045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_191950408_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
transcript_83367.nnic	chr2	-	509	4	Antisense	novelGene_ENSG00000286358.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	2.62466929133727	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCTCAGGTGTGTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	193171207	193132529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_193132652_193160319_193160432_193167259_193167378_193171050
transcript_83369.known	chr2	+	1852	2	FSM	ENSG00000286358.1	ENST00000652985.1	1852	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAACATAAATTTTTAT	6433	False	NA	NA	False	NA	NA	NA	193170703	193172765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_193170803_193171012
transcript_83374.known	chr2	+	5222	10	FSM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_1	111.426552236035	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	5	True	NA	17	True	AATAAA	-20	NA	195657225	195737700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
transcript_8338.known	chr1	+	1897	3	FSM	ENSG00000226419.8	ENST00000420168.2	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAGGTAGAGCTGGCCG	23	False	NA	NA	False	AAAACA	-3	NA	112956519	112969395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112956957_112960476_112960576_112968034
transcript_83381.nic	chr2	+	1906	5	ISM	ENSG00000196950.14	ENST00000359634.10	5222	10	-266	28858	49	2166	5prime_fragment	FALSE	canonical	3	877	junction_1	158.185610913256	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTATTTTTTATTTA	2	True	NA	NA	False	NA	NA	NA	195656959	195708842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655
transcript_83386.nnic	chr2	+	688	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10296	-30483	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	161	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTACTATTCATCA	NA	False	NA	NA	False	ATTAAA	-21	NA	195586272	195628104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_195586418_195606135_195606234_195627659
transcript_83389.nnic	chr2	+	437	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10296	67	at_least_one_novel_splicesite	FALSE	canonical	3	300	junction_2	14.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATATTGAAAAACTTTT	NA	False	NA	NA	False	AATGAA	-7	NA	195586272	195680225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_83391.nnic	chr2	+	944	3	NNC	ENSG00000196950.14	novel	2009	6	NA	NA	10296	299	at_least_one_novel_splicesite	FALSE	canonical	3	300	junction_2	14.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAGGAAGAAAAAAGG	NA	False	NA	40	True	AATAAA	-34	NA	195586272	195680732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_83394.nic	chr2	+	513	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	-165	57477	52	67	5prime_fragment	FALSE	canonical	3	877	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATATTGAAAAACTTTT	5	True	NA	NA	False	AATGAA	-7	NA	195656962	195680225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_195657282_195680031
transcript_83395.nic	chr2	+	1244	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	-389	56970	-8	299	5prime_fragment	FALSE	canonical	3	877	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGAGGAAGAAAAAAGG	-12	True	NA	40	True	AATAAA	-34	NA	195656738	195680732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_195657282_195680031
transcript_83396.known	chr2	-	5273	8	FSM	ENSG00000081320.11	ENST00000263955.9	5273	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	4.80645824036021	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCTGAAAACAAGTA	-1	True	NA	NA	False	AATAAA	-17	NA	196171578	196133582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196137730_196139619_196139800_196141248_196141298_196143559_196143687_196145910_196146056_196156438_196156652_196163261_196163428_196171332
transcript_83397.nic	chr2	-	538	3	ISM	ENSG00000081320.11	ENST00000263955.9	5273	8	-46	22989	-46	0	5prime_fragment	FALSE	canonical	3	27	junction_1	1.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGGACAGGATTGTCGA	4854	False	NA	20	True	AAAAAG	-5	NA	196171624	196156571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_196156652_196163261_196163428_196171332
transcript_834.known	chr1	-	2992	20	FSM	ENSG00000248333.9	ENST00000341832.11	2992	20	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_16	41.8596785341289	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGTGTCGTCCTTTGA	-17	True	NA	NA	False	ATTAAA	-18	NA	1659004	1635224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_83422.known	chr2	+	2113	7	FSM	ENSG00000144395.18	ENST00000471546.5	2113	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	19.5760624800347	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACATTGTCTCATTTG	NA	False	NA	NA	False	AATACA	-17	NA	196639631	196667934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_196639779_196646340_196646505_196656632_196656854_196656957_196657137_196658791_196658861_196665566_196665684_196666718
transcript_83427.nic	chr2	+	815	6	NIC	ENSG00000144395.18	novel	2113	7	NA	NA	5	-1129	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	20.2148460295892	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTTGGAGATTGCTAC	NA	False	NA	NA	False	NA	NA	NA	196639636	196666805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_196639779_196656632_196656854_196656957_196657137_196658791_196658861_196665566_196665684_196666718
transcript_83428.nnic	chr2	+	903	5	NNC	ENSG00000144395.18	novel	2113	7	NA	NA	-5	2859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	24.3657033553312	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGACATACGTTTCCAAC	-7	True	NA	NA	False	AATAAA	-31	NA	196639709	196660288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_196639779_196656632_196656854_196656957_196657137_196658791_196658861_196659923
transcript_83430.known	chr2	-	4261	18	FSM	ENSG00000119041.11	ENST00000263956.8	4261	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_8	32.8476613799443	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAAGCTGCTCCTTGCT	3	True	NA	NA	False	ATTAAA	-18	NA	196799683	196763034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_83436.known	chr2	-	1736	9	FSM	ENSG00000119041.11	ENST00000409364.3	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_7	19.0455867591419	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGACATTGGCTGGTGA	27	True	NA	NA	False	AATAAA	-17	NA	196799659	196780088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_83443.known	chr2	-	11090	27	FSM	ENSG00000197121.15	ENST00000354764.9	11090	27	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_23	9.1890080978572	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGTAAAAAGATTGCTTA	-1	True	NA	-12	True	AATAAA	-17	NA	196926707	196833003	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196841373_196842720_196842826_196843887_196844076_196844523_196844575_196845881_196846018_196847002_196847201_196847946_196848038_196864986_196865081_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
transcript_83447.nic	chr2	-	2572	21	ISM	ENSG00000197121.15	ENST00000354764.9	11090	27	-40	14454	-2	18	5prime_fragment	FALSE	canonical	3	43	junction_17	9.77445650662992	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATTACTTTCTACTAG	12	True	NA	NA	False	AAAAAG	-1	NA	196926747	196847457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_196848038_196864986_196865081_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
transcript_83456.known	chr2	-	2443	20	FSM	ENSG00000197121.15	ENST00000409475.5	2443	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	16.6621969999237	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	29	True	NA	NA	False	NA	NA	NA	196926730	196847475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196848038_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
transcript_83457.known	chr2	-	7218	28	FSM	ENSG00000065413.20	ENST00000647377.1	7218	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.8928788650638	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTTGGAATTTGTGT	185	False	NA	NA	False	AATAAA	-10	NA	197310646	196986674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196990928_196993582_196993675_196995378_196995462_196998336_196998420_196998906_196999053_197000418_197000503_197001752_197001841_197005693_197005911_197007805_197007924_197008943_197009032_197013510_197013713_197025195_197025268_197078702_197078815_197081644_197081726_197083368_197083510_197086679_197086749_197088710_197088775_197089949_197090033_197099815_197099931_197110765_197110845_197121331_197121545_197122649_197122793_197125380_197125469_197125836_197126038_197136591_197136663_197147026_197147106_197187022_197187107_197310577
transcript_83458.known	chr2	-	1622	10	FSM	ENSG00000065413.20	ENST00000409919.5	1622	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.15470053837925	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTATTCAGATTGCTTG	-1	True	NA	NA	False	AATAAA	-20	NA	197310787	197099476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197099931_197110765_197110845_197121331_197121545_197122649_197122793_197125380_197125469_197125836_197126038_197136591_197136663_197147026_197147106_197187022_197187107_197310577
transcript_83461.known	chr2	-	6463	25	FSM	ENSG00000115524.17	ENST00000335508.11	6463	25	0	0	0	0	multi-exon	TRUE	canonical	3	1439	junction_21	202.108018251792	3210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTAGTAGACCAATTTTT	-1	True	NA	-20	True	AATAAA	-17	NA	197435028	197389783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197392462_197392971_197393189_197396055_197396329_197397984_197398117_197398460_197398582_197400054_197400167_197400251_197400435_197400714_197400937_197401399_197401526_197401741_197401889_197401984_197402131_197402555_197402827_197402948_197403036_197403584_197403765_197405075_197405178_197405274_197405473_197407997_197408120_197408368_197408582_197409769_197410008_197416740_197416912_197418508_197418589_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_83462.known	chr2	-	651	5	FSM	ENSG00000115524.17	ENST00000414963.2	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	901.534629118594	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	197435079	197418795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_83463.known	chr2	-	2127	4	FSM	ENSG00000115524.17	ENST00000487698.5	2127	4	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_2	121.962653664509	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	NA	False	NA	-7	True	ATTAAA	-15	NA	197435079	197418795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197420543_197421028_197421134_197423807_197423975_197434971
transcript_83464.known	chr2	-	600	7	FSM	ENSG00000115524.17	ENST00000409915.8	600	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	936.797203240915	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGAAAAAGCTAAAGCTGG	0	True	NA	NA	False	NA	NA	NA	197435027	197416890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197416912_197418508_197418589_197418895_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_83465.known	chr2	+	1355	5	FSM	ENSG00000115520.9	ENST00000409010.1	1355	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	135.462863914801	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACACCTGTA	264	False	NA	NA	False	AGTAAA	-15	NA	197453793	197474410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197454050_197459931_197460082_197462538_197462732_197470069_197470172_197473756
transcript_83466.known	chr2	+	879	4	FSM	ENSG00000115520.9	ENST00000409398.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	135.492517218562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGCTAGAATACTGGC	12	False	NA	NA	False	NA	NA	NA	197453492	197474168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197453665_197462538_197462732_197470069_197470172_197473756
transcript_83468.known	chr2	+	2239	5	FSM	ENSG00000115520.9	ENST00000263960.7	2112	5	-129	2	-70	-2	multi-exon	FALSE	canonical	3	273	junction_4	43.9658958739612	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATCTCCTGTCCTCCT	2246	False	NA	NA	False	AATATA	-29	NA	197453422	197475308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197453665_197459931_197460082_197462538_197462732_197470069_197470172_197473756
transcript_83470.known	chr2	-	2449	13	FSM	ENSG00000144381.18	ENST00000428204.6	2449	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	3159.53290324166	44299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-2	True	NA	NA	False	AATAAA	-16	NA	197499866	197486585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499258_197499439_197499781
transcript_83471.known	chr2	-	2407	12	FSM	ENSG00000144381.18	ENST00000452200.6	2407	12	0	0	0	0	multi-exon	FALSE	canonical	1	235	junction_11	2610.58026860753	44701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	2874	False	NA	NA	False	AATAAA	-16	NA	197500221	197486585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
transcript_83472.known	chr2	-	2299	12	FSM	ENSG00000144381.18	ENST00000345042.6	2299	12	0	0	0	0	multi-exon	FALSE	canonical	1	186	junction_11	2621.74102458652	44435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	2821	False	NA	NA	False	AATAAA	-16	NA	197500274	197486585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197500159
transcript_8348.known	chr1	+	1194	3	FSM	ENSG00000226419.8	ENST00000435800.6	1194	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGGGAGGCTGAGGTG	4	True	NA	NA	False	NA	NA	NA	112956428	112999496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112956957_112960476_112960576_112998929
transcript_83487.known	chr2	+	1447	8	FSM	ENSG00000115540.15	ENST00000409360.1	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	480.542508047744	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTACATACAGGATGATC	95	False	NA	NA	False	CATAAA	-44	NA	197516159	197551279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197516356_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_83529.known	chr2	+	478	3	FSM	ENSG00000115541.11	ENST00000409729.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	1094	junction_1	5864.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCACTGAAGTTCTG	154	False	NA	-41	True	NA	NA	NA	197500139	197503296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197500440_197503038_197503129_197503208
transcript_83534.known	chr2	+	557	4	FSM	ENSG00000115541.11	ENST00000233893.10	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	238.481771956591	83449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTAATCTTTAGTTATT	-3	True	NA	18	True	AATAAA	-14	NA	197500378	197503449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197500440_197501073_197501239_197503038_197503129_197503208
transcript_83535.known	chr2	-	2245	12	FSM	ENSG00000144381.18	ENST00000388968.8	2245	12	0	0	0	0	multi-exon	FALSE	canonical	1	2687	junction_7	1687.50053810827	46840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	0	True	NA	NA	False	AATAAA	-18	NA	197499840	197486583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_83536.known	chr2	+	3752	8	FSM	ENSG00000115540.15	ENST00000323303.9	3752	8	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_7	137.169193899731	2955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAAGCATCTCATTG	1	True	NA	22	True	AGTAAA	-16	NA	197516065	197553699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197516147_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_83537.known	chr2	-	2413	13	FSM	ENSG00000144381.18	ENST00000678621.1	2413	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3057.32328007505	43473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	3177	False	NA	NA	False	AATAAA	-16	NA	197499918	197486585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487287_197487380_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_83538.known	chr2	+	570	3	FSM	ENSG00000115541.11	ENST00000409468.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	12424	junction_1	284.5	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGTCTCCAAAATTG	-3	True	NA	45	True	AATAAA	-19	NA	197500378	197503382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197500440_197501073_197501239_197503038
transcript_83539.known	chr2	+	1130	7	FSM	ENSG00000115540.15	ENST00000409355.2	1130	7	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_2	596.970686047481	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCAAATGAAGCATTAG	19	True	NA	NA	False	NA	NA	NA	197516083	197551183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197516147_197535529_197535606_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_8354.known	chr1	-	2467	3	FSM	ENSG00000238198.2	ENST00000421157.2	2467	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGTTGTCAAGTGTCT	NA	False	NA	NA	False	AATAAA	-18	NA	113073113	113011686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113013840_113048422_113048562_113072938
transcript_83540.known	chr2	-	3230	10	FSM	ENSG00000144381.18	ENST00000476746.6	3230	10	0	0	0	0	multi-exon	FALSE	canonical	3	5516	junction_9	945.691986501595	44137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	3215	False	NA	NA	False	AATAAA	-16	NA	197499880	197486585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197495377_197497139_197497393_197498674_197498851_197499781
transcript_83544.nnic	chr2	+	818	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_2	5.5	99	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTAGTCTCTTC	NA	False	NA	12	True	ATTAAA	-22	NA	197578615	197587688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_197578923_197580468_197580643_197587351
transcript_83546.nnic	chr2	+	650	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	9	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGTGCAACTTGGTTC	NA	False	NA	NA	False	AATAAA	-24	NA	197578615	197614450	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_197578923_197580468_197580643_197614281
transcript_83549.nnic	chr2	-	1260	3	NNC	ENSG00000162944.11	novel	5419	9	NA	NA	-6	-121	intron_retention	FALSE	canonical	1	1	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTTGTGAGTTGCTCA	-5	True	NA	NA	False	AATAAA	-16	NA	197676051	197644367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_197644712_197646482_197646667_197675319
transcript_83556.known	chr2	+	1032	4	FSM	ENSG00000222017.1	ENST00000409845.1	1032	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTTTGTTGTAGTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	197693105	197774823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197693217_197698809_197698865_197771856_197771915_197774015
transcript_83558.known	chr2	+	3027	1	FSM	ENSG00000247626.5	ENST00000282276.8	3027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATCTGTTCTGTTGCA	-19	True	NA	13	True	ATTAAA	-25	NA	197705368	197708395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197705400_197708400
transcript_8356.known	chr1	-	3753	5	FSM	ENSG00000155380.13	ENST00000369626.8	3753	5	0	0	0	0	multi-exon	FALSE	canonical	3	1339	junction_2	121.073066782006	3116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTCCTCATCTTTA	-1	True	NA	-14	True	AATAAA	-18	NA	112956196	112911846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
transcript_83563.known	chr2	+	1663	1	FSM	ENSG00000225953.4	ENST00000668832.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGGTTTCGTTTT	-18	True	NA	6	True	AATAAA	-20	NA	199459759	199461422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_199459800_199461400
transcript_83564.known	chr2	-	944	4	FSM	ENSG00000226124.9	ENST00000416668.5	944	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	5.90668171555645	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATTTGTTTATAAA	-12	True	NA	NA	False	AATAAA	-22	NA	199851173	199760543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199760836_199846074_199846171_199848847_199848970_199850739
transcript_83566.known	chr2	-	772	5	FSM	ENSG00000226124.9	ENST00000420922.6	772	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.17960354715414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAAATAATTTGTT	-1	True	NA	NA	False	AATAAA	-16	NA	199850873	199760549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199760836_199844379_199844533_199846074_199846171_199848847_199848970_199850758
transcript_83568.nic	chr2	-	631	4	NIC	ENSG00000232732.11	novel	467	3	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.4142135623731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATGCAACCTGATTT	505	False	NA	NA	False	AATAAA	-27	NA	199911174	199878494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_199878701_199879405_199879611_199909102_199909173_199911024
transcript_83569.known	chr2	-	183	3	FSM	ENSG00000232732.11	ENST00000608419.1	183	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCAGAGCTGGTTTTC	-7	True	NA	NA	False	NA	NA	NA	199911091	199908930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199908995_199909102_199909173_199911042
transcript_8357.known	chr1	-	452	2	FSM	ENSG00000155380.13	ENST00000478835.1	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	1494	junction_1	0	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGTCTGTATTAGGT	158	False	NA	NA	False	NA	NA	NA	112956181	112929047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112929353_112956034
transcript_83570.known	chr2	-	811	3	FSM	ENSG00000232732.11	ENST00000600956.6	811	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCATTGGGAGCACCTAC	6	True	NA	NA	False	NA	NA	NA	199911101	199878928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199879611_199909102_199909173_199911042
transcript_83572.known	chr2	-	288	3	FSM	ENSG00000232732.11	ENST00000596619.5	288	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGAAACCTGATATACT	520	False	NA	NA	False	NA	NA	NA	199911159	199894562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199894664_199909102_199909173_199911042
transcript_83574.nic	chr2	-	1390	2	ISM	ENSG00000232732.11	ENST00000653798.1	1267	3	-68	29437	-15	400	5prime_fragment	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGCGGGGGGGTGGGGG	505	False	NA	NA	False	TTTAAA	-11	NA	199911174	199907932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_199909173_199911024
transcript_83575.known	chr2	-	270	2	FSM	ENSG00000232732.11	ENST00000625205.2	270	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATTCATTCATGCAACCT	2521	False	NA	NA	False	AATAAA	-22	NA	199909158	199878499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199878714_199909102
transcript_83577.known	chr2	-	5123	8	FSM	ENSG00000162971.11	ENST00000354611.9	5123	8	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_6	29.1932337701595	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGGGACTTTGTATTG	1	True	NA	-1	True	ATTAAA	-15	NA	199955491	199928912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948317_199948473_199955392
transcript_83578.known	chr2	-	4287	8	FSM	ENSG00000162971.11	ENST00000483328.5	4287	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	18.8960637300417	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTATATGCAGAGCT	NA	False	NA	NA	False	NA	NA	NA	199955736	199929974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_8358.known	chr1	+	8803	3	FSM	ENSG00000226419.8	ENST00000428411.6	8803	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	4.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCATACTCTGTTCCAGGC	-10	True	NA	7	True	AATAAA	-19	NA	112956414	112975430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112957723_112960476_112960576_112968034
transcript_8359.known	chr1	+	1508	3	FSM	ENSG00000226419.8	ENST00000664314.1	1508	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	-10	True	NA	0	True	AATAAA	-15	NA	112956414	112964072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112957723_112960476_112960576_112963971
transcript_83592.known	chr2	-	2042	7	FSM	ENSG00000162971.11	ENST00000441832.1	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	42.687494916219	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGAGCCATTGTGTGT	-11	True	NA	-11	True	AATAAA	-28	NA	199955503	199931898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199933324_199935930_199936048_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_8360.known	chr1	+	11566	18	FSM	ENSG00000198799.12	ENST00000361127.6	11566	18	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	21.0686799148974	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTCTTCTTTTGCC	-20	True	NA	5	True	AATAAA	-17	NA	113073197	113132260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113073646_113091317_113091384_113093205_113093281_113093429_113093565_113094338_113094483_113094611_113094756_113095873_113096018_113096221_113096366_113098704_113098786_113100210_113100283_113100419_113100489_113107593_113107758_113110241_113110563_113112478_113112761_113114426_113114877_113116286_113116437_113119232_113119524_113123874
transcript_83602.known	chr2	+	1495	6	FSM	ENSG00000162972.11	ENST00000295079.6	1495	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	122.236492096264	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTACTTACAAATTT	NA	False	NA	0	True	AATAAA	-11	NA	199955316	199964108	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_199955337_199955496_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_83621.known	chr2	+	3691	2	FSM	ENSG00000178074.6	ENST00000319974.6	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_1	0	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGGATGTGCTTTA	-34	True	NA	17	True	ATTAAA	-18	NA	199911292	199928273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_199911772_199925061
transcript_83622.known	chr2	+	1386	5	FSM	ENSG00000162972.11	ENST00000392290.6	1399	5	21	-8	21	8	multi-exon	FALSE	canonical	3	289	junction_2	15.9608896995124	1698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTATATATTTTTTAA	32	False	NA	17	True	AATAAA	-28	NA	199955602	199964125	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_8363.known	chr1	+	6874	21	FSM	ENSG00000081026.19	ENST00000307546.14	6874	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.96760360525769	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATGGCCTGCATTTCTT	5	True	NA	58	True	TTTAAA	-8	NA	113390514	113685923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113391350_113549514_113549632_113580541_113580662_113585386_113585597_113590483_113590659_113594480_113594561_113614600_113614659_113619735_113619831_113622805_113622995_113641910_113642517_113643742_113643775_113646485_113646643_113649236_113649329_113651013_113651207_113653829_113654019_113659079_113659266_113671733_113671837_113672614_113672742_113673321_113673466_113681197_113681337_113682896
transcript_83630.known	chr2	+	2698	13	FSM	ENSG00000196141.14	ENST00000409988.7	2698	13	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	383.716221821399	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	94	False	NA	18	True	ATTAAA	-15	NA	200306150	200478529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_83631.known	chr2	+	2648	13	FSM	ENSG00000196141.14	ENST00000409718.5	2648	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	414.511660471291	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	8	True	NA	19	True	ATTAAA	-16	NA	200305892	200478530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306293_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_83633.known	chr2	+	6212	13	FSM	ENSG00000196141.14	ENST00000409140.8	6212	13	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_7	295.837652550629	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTCTTAGTTT	-5	True	NA	NA	False	AATAAA	-13	NA	200306692	200482264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_8364.nic	chr1	+	1237	7	ISM	ENSG00000081026.19	ENST00000369611.4	3596	21	199491	38662	199219	-38662	internal_fragment	FALSE	canonical	3	22	junction_1	3.21455025366432	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGTATACACTGGTCC	NA	False	NA	NA	False	NA	NA	NA	113590479	113643772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_113590659_113594480_113594561_113614600_113614659_113619735_113619831_113622805_113622995_113641910_113642517_113643742
transcript_83640.known	chr2	+	2119	12	FSM	ENSG00000196141.14	ENST00000360760.9	2119	12	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	313.609300545168	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	-1	True	NA	19	True	ATTAAA	-16	NA	200306523	200478530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_8365.known	chr1	-	3657	19	FSM	ENSG00000116793.16	ENST00000369604.6	3657	19	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	65.082853177913	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCTATAATCGGCC	22	True	NA	NA	False	ATTAAA	-22	NA	113759486	113696830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113697726_113698261_113698388_113699703_113699800_113700793_113700950_113704080_113704168_113704665_113704798_113705889_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278_113713439_113724758_113724894_113726417_113726575_113738109_113738269_113738729_113738800_113757698_113757756_113758658_113758734_113759022
transcript_83662.nic	chr2	+	993	5	ISM	ENSG00000196141.14	ENST00000409988.7	2698	13	-272	62101	-2	-2905	5prime_fragment	FALSE	canonical	3	215	junction_1	460.334117788373	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTAATATTGATTGT	-6	True	NA	32	True	AAAAAG	-4	NA	200305878	200416428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378
transcript_83670.known	chr2	+	1730	3	FSM	ENSG00000196141.14	ENST00000471601.5	1730	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	482	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCCAG	0	True	NA	NA	False	AATGAA	-39	NA	200306553	200390854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306602_200329430_200329481_200389222
transcript_83671.nic	chr2	+	704	2	ISM	ENSG00000196141.14	ENST00000428692.5	541	5	-292	59489	-14	-42397	5prime_fragment	FALSE	canonical	3	215	junction_1	0	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCTTTTAAAGACATTC	12	False	NA	NA	False	NA	NA	NA	200306261	200329794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200306602_200329430
transcript_83674.known	chr2	+	4478	9	FSM	ENSG00000163535.18	ENST00000357799.9	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	14.4892201308421	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAATACACAGTTTATTG	40	True	NA	NA	False	AATAAA	-17	NA	200526206	200584096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049_200573978_200575310_200575462_200583448
transcript_83680.nic	chr2	+	1328	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-124	12594	-84	1360	5prime_fragment	FALSE	canonical	3	185	junction_5	6.05530070819498	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAATAAAAAAACAAATGAA	NA	False	NA	NA	False	ATTAAA	-8	NA	200526082	200571502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_83681.nic	chr2	+	1398	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-124	12524	-84	1430	5prime_fragment	FALSE	canonical	3	185	junction_5	6.05530070819498	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAGATCAAAGAGAC	NA	False	NA	NA	False	AATGAA	-40	NA	200526082	200571572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_83682.nic	chr2	+	1647	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-124	12275	-84	1679	5prime_fragment	FALSE	canonical	3	185	junction_5	6.05530070819498	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAGAATAACAAATG	NA	False	NA	NA	False	AATAAA	-3	NA	200526082	200571821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_83685.known	chr2	-	2939	7	FSM	ENSG00000155729.13	ENST00000359878.8	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	5.02493781056044	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-1	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200509627
transcript_83686.known	chr2	-	2556	7	FSM	ENSG00000155729.13	ENST00000409157.5	2556	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	11.1803398874989	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-1	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200510010
transcript_83691.nic	chr2	+	434	3	ISM	ENSG00000163535.18	ENST00000418045.5	640	4	16075	0	-84	0	3prime_fragment	FALSE	canonical	3	201	junction_2	0.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAATTTTGAGAACACA	NA	False	NA	NA	False	AAAAAG	-10	NA	200526082	200535124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200526253_200532973_200533109_200534995
transcript_83693.known	chr2	+	1041	6	FSM	ENSG00000163535.18	ENST00000409203.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_5	6.16441400296898	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCTCAATATCTTAGC	0	True	NA	NA	False	AATAAA	-13	NA	200526166	200570142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662
transcript_83694.known	chr2	+	4928	35	FSM	ENSG00000138356.14	ENST00000374700.7	4928	35	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_9	10.4401407937052	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGAGTAGATGTATCT	-28	True	NA	7	True	AATAAA	-18	NA	200586013	200671495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200586154_200593145_200593204_200595271_200595369_200597396_200597506_200599619_200599747_200602283_200602346_200603266_200603357_200604016_200604098_200604695_200604841_200605535_200605629_200608983_200609136_200609320_200609415_200611383_200611494_200612608_200612794_200613803_200613967_200615970_200616064_200620649_200620820_200621119_200621247_200623860_200623984_200627352_200627450_200634790_200634916_200636910_200637045_200638214_200638303_200641097_200641185_200642609_200642802_200650973_200651202_200656841_200656938_200659164_200659294_200659994_200660070_200661578_200661632_200662854_200662970_200666686_200666753_200668614_200668804_200669574_200669743_200670628
transcript_83698.nnic	chr2	+	2121	11	NNC	ENSG00000138356.14	novel	580	7	NA	NA	-10834	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	11.0113577727726	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGAGTAGATGTATCT	NA	False	NA	7	True	AATAAA	-18	NA	200649202	200671495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_200649338_200650973_200651202_200656841_200656938_200659164_200659294_200659994_200660070_200661578_200661632_200662854_200662970_200666686_200666753_200668614_200668804_200669574_200669743_200670628
transcript_83709.known	chr2	+	1473	12	FSM	ENSG00000082153.18	ENST00000452790.6	1473	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	644.519604559207	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTCTTACATCTTCCT	-9	True	NA	NA	False	AGTAAA	-41	NA	200812355	200822243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200812494_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_83711.known	chr2	+	1075	9	FSM	ENSG00000082153.18	ENST00000410110.6	1075	9	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_1	599.996653636501	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGGTCAAGTGTAATG	-21	True	NA	NA	False	AAAACA	-28	NA	200811545	200818818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754
transcript_83714.known	chr2	+	1059	7	FSM	ENSG00000082153.18	ENST00000452206.5	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	817.635140036326	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAACTTTTTTTCATT	-21	True	NA	NA	False	NA	NA	NA	200811545	200818083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200811947_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973
transcript_83716.known	chr2	+	6511	12	FSM	ENSG00000082153.18	ENST00000409600.6	6511	12	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	151.562332048131	3285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGACTGTTCAGTTGGT	-1	True	NA	24	True	AATAAA	-34	NA	200811909	200827338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200811991_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_83717.known	chr2	-	2026	13	FSM	ENSG00000013441.17	ENST00000434813.3	2026	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	48.9759011033885	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTTATTTTGTTTGGG	126	False	NA	-130	True	NA	NA	NA	200864561	200853195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864100
transcript_83718.known	chr2	-	1847	13	FSM	ENSG00000013441.17	ENST00000321356.9	1847	13	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_9	41.1771241778194	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	-2	True	NA	57	True	ATTAAA	-14	NA	200864658	200853008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864563
transcript_83721.known	chr2	-	1682	12	FSM	ENSG00000013441.17	ENST00000432425.5	1682	12	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	22.8686511760438	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	0	True	NA	-15	True	AATAAA	-18	NA	200864656	200853080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
transcript_83725.known	chr2	-	3208	11	FSM	ENSG00000013441.17	ENST00000473565.5	3208	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_10	18.0986187318259	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-4	True	NA	-15	True	AATAAA	-18	NA	200864691	200853080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200861467_200861701_200861863_200864563
transcript_83730.known	chr2	-	690	3	FSM	ENSG00000013441.17	ENST00000481641.1	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	49.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGGAAATTCCGGAAATAA	435	False	NA	NA	False	NA	NA	NA	200864252	200861089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200861467_200861701_200861863_200864100
transcript_83731.known	chr2	-	1843	12	NNC	ENSG00000013441.17	novel	1847	13	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_9	39.1395046780907	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	NA	False	NA	57	True	ATTAAA	-14	NA	200864744	200853008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859748_200861237_200861467_200861701_200861863_200864563
transcript_83742.known	chr2	-	725	6	FSM	ENSG00000240344.9	ENST00000409264.6	725	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	107.223877937706	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATAATGATTATCCAA	-6	True	NA	-75	True	NA	NA	NA	200889015	200871212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200888955
transcript_83746.known	chr2	-	1166	7	FSM	ENSG00000240344.9	ENST00000392283.9	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	37.8700262594164	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-14	True	NA	59	True	AATGAA	-18	NA	200889077	200870906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
transcript_83747.known	chr2	-	1222	6	FSM	ENSG00000240344.9	ENST00000465823.5	1222	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	99.6505895617281	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATAAGGTATATATGA	1	True	NA	10	True	ATTAAA	-28	NA	200889276	200870955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200888955
transcript_83748.known	chr2	-	1370	7	FSM	ENSG00000240344.9	ENST00000286175.12	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	119.959368121043	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	8	True	NA	59	True	AATGAA	-18	NA	200889269	200870906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200888955
transcript_83749.known	chr2	-	313	5	FSM	ENSG00000240344.9	ENST00000443398.5	313	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	115.213660214403	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAACAGCCACATTTGG	11	True	NA	NA	False	NA	NA	NA	200889266	200876963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200889243
transcript_83754.known	chr2	+	1679	8	FSM	ENSG00000196290.17	ENST00000409357.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	188.746563693548	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTGAATAAAATCTG	-14	True	NA	-7	True	ATTAAA	-27	NA	200889414	200903896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200889653_200890522_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_83759.nnic	chr2	+	1934	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-462	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_1	144.215887551345	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	NA	False	NA	22	True	AATAAA	-15	NA	200888864	200903925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_200889392_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_83760.nic	chr2	+	1409	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	142.458668469919	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	-32	True	NA	22	True	AATAAA	-15	NA	200889338	200903925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_200889392_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_83762.known	chr2	+	1626	7	FSM	ENSG00000196290.17	ENST00000359683.8	1626	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	136.854444169303	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAGGAGCTCAAGTGA	17	True	NA	27	True	AATAAA	-20	NA	200889387	200903930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_83766.known	chr2	+	1689	7	FSM	ENSG00000196290.17	ENST00000409020.6	1689	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	128.854784760037	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	0	True	NA	22	True	AATAAA	-15	NA	200889370	200903925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200889653_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_8378.nnic	chr1	-	667	4	NNC	ENSG00000116793.16	novel	956	3	NA	NA	-456	293	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	87.3854806144718	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAGAAAAGAAGC	NA	False	NA	NA	False	ATTAAA	-32	NA	113759945	113749228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_113749590_113757698_113757756_113758658_113758734_113759771
transcript_83790.known	chr2	+	1269	5	FSM	ENSG00000196290.17	ENST00000409588.1	1269	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	178.951110641985	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	13	False	NA	22	True	AATAAA	-15	NA	200891916	200903925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200892380_200893245_200893409_200895263_200895391_200899384_200899469_200903493
transcript_83795.known	chr2	-	9333	12	FSM	ENSG00000155744.10	ENST00000418596.7	9333	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_11	12.6301488968668	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGTTGATTTTAT	-20	True	NA	0	True	TATAAA	-30	NA	201071669	200973717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200981872_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
transcript_83807.known	chr2	+	503	4	FSM	ENSG00000119013.10	ENST00000433898.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	873.486500563498	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	2	True	NA	23	True	ATTAAA	-12	NA	201072007	201085744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072060_201072338_201072362_201078880_201079023_201085458
transcript_83808.known	chr2	+	555	4	FSM	ENSG00000119013.10	ENST00000684175.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	863.812608279262	2258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	16	True	NA	29	True	ATTAAA	-18	NA	201072021	201085750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072060_201073070_201073154_201078880_201079023_201085458
transcript_83816.known	chr2	+	564	3	FSM	ENSG00000119013.10	ENST00000450023.6	564	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	957.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAATACCTGGAAGCATC	7506	False	NA	NA	False	AATAAA	-19	NA	201071432	201085615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201071698_201078880_201079023_201085458
transcript_83818.known	chr2	+	739	3	FSM	ENSG00000119013.10	ENST00000684420.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	901	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATCTGCTTTTGTCATT	46	False	NA	24	True	ATTAAA	-13	NA	201072051	201085745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072362_201078880_201079023_201085458
transcript_8382.known	chr1	-	1063	6	FSM	ENSG00000116793.16	ENST00000412670.1	1063	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_5	28.1496003524029	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGATATTTGTGGATTT	2318	False	NA	-8	True	AATAAA	-16	NA	113713328	113705764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113706163_113706593_113706723_113710253_113710476_113711745_113711836_113711939_113712114_113713278
transcript_83822.known	chr2	-	4288	18	FSM	ENSG00000115942.9	ENST00000234296.7	4288	18	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_8	23.047115875376	711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTAGTGCTGGTTT	1	True	NA	NA	False	AATAAA	-31	NA	200963660	200908976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
transcript_83823.known	chr2	+	493	3	FSM	ENSG00000119013.10	ENST00000237889.9	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	1477	junction_1	219	15269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	-5	True	NA	29	True	ATTAAA	-18	NA	201072000	201085750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072060_201078880_201079023_201085458
transcript_83824.known	chr2	+	547	4	FSM	ENSG00000119013.10	ENST00000454214.1	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	863.960390038545	2805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	24	False	NA	29	True	ATTAAA	-18	NA	201072029	201085750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072060_201072278_201072362_201078880_201079023_201085458
transcript_83825.known	chr2	+	1548	3	FSM	ENSG00000119013.10	ENST00000682325.1	1548	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	875	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATGCCAATCTG	18	True	NA	13	True	ATTAAA	-2	NA	201072023	201085734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201073154_201078880_201079023_201085458
transcript_83830.known	chr2	+	2128	10	FSM	ENSG00000003402.21	ENST00000423241.6	2128	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	40.9184675623895	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGTGTGGG	915	False	NA	1	True	AGTAAA	-6	NA	201118490	201164110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
transcript_83838.known	chr2	+	1283	6	FSM	ENSG00000003402.21	ENST00000341222.10	1283	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	45.9190592238125	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	-6	True	NA	21	True	AATAAA	-17	NA	201116166	201141598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_83839.nic	chr2	+	1344	6	NIC	ENSG00000003402.21	novel	2128	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	44.2962752384441	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	950	False	NA	21	True	AATAAA	-17	NA	201118525	201141598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_83842.nnic	chr2	+	1142	6	NNC	ENSG00000003402.21	novel	1198	5	NA	NA	-401	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	43.020925141145	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	1133	False	NA	21	True	AATAAA	-17	NA	201128927	201141598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_201129102_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_83844.nic	chr2	+	1174	6	NIC	ENSG00000003402.21	novel	1198	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	34.5913283931103	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	353	False	NA	21	True	AATAAA	-17	NA	201129314	201141598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_201129521_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_8385.known	chr1	-	2742	11	FSM	ENSG00000134262.13	ENST00000256658.8	2742	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	24.2794151494635	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-4	True	NA	NA	False	ATTAAA	-20	NA	113905070	113894747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113904941
transcript_83851.nic	chr2	+	2106	5	NIC	ENSG00000003402.21	novel	1198	5	NA	NA	-14	-2	intron_retention	FALSE	canonical	3	40	junction_1	33.0936172093653	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCATTTGTTTTTTTA	353	False	NA	19	True	AATAAA	-15	NA	201129314	201141596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_201129521_201129728_201130147_201133028_201133135_201135971_201136108_201140356
transcript_83857.known	chr2	+	684	3	FSM	ENSG00000003402.21	ENST00000417748.1	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	43	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGGCCGAGGCAAGATA	-5	True	NA	NA	False	GATAAA	-38	NA	201129328	201133102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201129521_201129728_201130147_201133028
transcript_83859.known	chr2	+	529	2	FSM	ENSG00000003402.21	ENST00000490965.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAATGCCTCCTTGCCT	947	False	NA	NA	False	ATTAAA	-14	NA	201118522	201119177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201118902_201119027
transcript_83860.known	chr2	+	5668	10	FSM	ENSG00000003400.15	ENST00000286186.11	5668	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	9.6775162612963	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTTGTCTCTTC	3	True	NA	11	True	ATTAAA	-22	NA	201183140	201221665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201203729_201203767_201205881_201205974_201208074_201208184_201209069_201209563_201217587
transcript_83861.known	chr2	+	3926	8	FSM	ENSG00000003400.15	ENST00000346817.9	3926	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	10.3015750727543	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAAGAACACTGTTCT	31	False	NA	12	True	AGTAAA	-15	NA	201183168	201220080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201208074_201208184_201209069_201209563_201217587
transcript_83862.known	chr2	+	1294	7	FSM	ENSG00000003400.15	ENST00000460140.5	1294	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	11.7011395456454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGGTAGTTTCTTTTCT	0	True	NA	NA	False	NA	NA	NA	201183111	201206250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201203729_201203767_201205881
transcript_83863.known	chr2	+	1126	6	FSM	ENSG00000003400.15	ENST00000374650.7	1126	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	9.8264947972306	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGCTTGCTGTGAGTTT	22	False	NA	16	True	ATTAAA	-18	NA	201183159	201200728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201200442
transcript_83865.nic	chr2	+	955	5	ISM	ENSG00000003400.15	ENST00000374650.7	1126	6	-48	4713	0	0	5prime_fragment	FALSE	canonical	3	29	junction_4	3.20156211871642	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCCCAAAAAAGAAAAAGAG	0	True	NA	NA	False	NA	NA	NA	201183111	201196015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841
transcript_83873.known	chr2	+	2911	3	FSM	ENSG00000064012.23	ENST00000490682.5	2911	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACATGGATGAATCTTG	-1	True	NA	NA	False	TATAAA	-23	NA	201233464	201242925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201233623_201234015_201234113_201240269
transcript_83875.known	chr2	-	6389	16	FSM	ENSG00000115993.13	ENST00000332624.8	6389	16	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_13	7.25901738070197	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCCCTGTGTCTTTG	22	True	NA	0	True	AATAAA	-22	NA	201451458	201377206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201381219_201384110_201384217_201386217_201386485_201387702_201388002_201389299_201389504_201389800_201389881_201392908_201393047_201394797_201394873_201395313_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_83877.known	chr2	+	2222	12	FSM	ENSG00000082146.13	ENST00000194530.8	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_5	27.1831863444062	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	0	True	NA	27	True	AATAAA	-16	NA	201451739	201480846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478356_201478602_201479488_201479532_201480031
transcript_83878.nic	chr2	-	1454	10	ISM	ENSG00000115993.13	ENST00000332624.8	6389	16	-103	15772	-61	2149	5prime_fragment	FALSE	canonical	3	25	junction_7	8.16496580927726	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTTCGTAGTAGATCTG	0	True	NA	NA	False	AATAAA	-1	NA	201451561	201392978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_201393047_201394797_201394873_201395313_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_83880.known	chr2	-	1436	8	FSM	ENSG00000115993.13	ENST00000430254.1	1436	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	8.06605383628177	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTCTTTGTAAAATG	-20	True	NA	NA	False	AATAAA	-14	NA	201451500	201395127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_8389.known	chr1	-	3173	10	FSM	ENSG00000134262.13	ENST00000369569.6	3173	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	18.5771663907904	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCGAATCCAGAATGGGAA	50	True	NA	NA	False	AATAAA	-19	NA	113904799	113894193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604
transcript_83890.known	chr2	-	1824	12	NNC	ENSG00000155755.20	novel	5592	13	NA	NA	-22	-13	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	133.059298282774	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTATATAACCTAAAT	-17	True	NA	85	True	AATAAA	-23	NA	201642692	201623699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639051_201640892_201640925_201642608
transcript_83894.known	chr2	-	1805	12	FSM	ENSG00000155755.20	ENST00000286196.9	1805	12	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_11	160.82560751652	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTGAAAGATGCTCTACA	9	True	NA	29	True	AATATA	-5	NA	201643484	201623755	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201643358
transcript_83911.known	chr2	-	6675	34	FSM	ENSG00000003393.16	ENST00000264276.11	6675	34	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_10	25.1097864867559	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTCGTTATTTTTTTTC	-4	True	NA	NA	False	AATAAA	-16	NA	201780933	201700266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201701890_201704121_201704219_201704453_201704604_201705138_201705201_201705415_201705462_201706845_201707023_201707868_201707992_201709880_201710039_201710990_201711109_201715671_201715840_201718076_201718211_201723042_201723121_201723329_201723442_201724294_201724460_201725355_201725455_201726483_201726550_201726663_201726867_201727211_201727279_201727704_201727776_201728511_201728641_201729051_201729184_201733275_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
transcript_83912.known	chr2	-	5086	5	FSM	ENSG00000003393.16	ENST00000681378.1	5086	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	28.3989436423259	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGGAGAATCGCTTGAA	NA	False	NA	NA	False	NA	NA	NA	201781158	201754128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
transcript_83914.known	chr2	-	2677	4	FSM	ENSG00000003393.16	ENST00000467448.5	2677	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	15.9234278833282	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTGTGTTTCTATTA	-27	True	NA	NA	False	ATTAAA	-16	NA	201780956	201759456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201761819_201767228_201767384_201768865_201768946_201780876
transcript_83919.nnic	chr2	+	531	2	Genic_Genomic	ENSG00000289026.1	novel	767	1	NA	NA	-10	0	multi-exon	FALSE	canonical	2	3	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGATCAAATGGTTGCT	NA	False	NA	15	True	ATTAAA	-23	NA	202032061	202032838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_202032358_202032603
transcript_83921.known	chr2	-	768	1	FSM	ENSG00000273209.1	ENST00000608741.1	768	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGGGTTATCCTCGTT	3231	False	NA	-26	True	ATTAAA	-16	NA	202033537	202032769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202032800_202033500
transcript_83922.known	chr2	+	4587	1	FSM	ENSG00000155760.3	ENST00000286201.3	4587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	764	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATTTATTTAGTTTAC	-1	True	NA	98	True	AATAAA	-18	NA	202033854	202038441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202033900_202038400
transcript_83924.nnic	chr2	-	291	2	NNC	ENSG00000222035.4	novel	3370	3	NA	NA	19995	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATGGTTTTCAGAT	NA	False	NA	-27	True	CATAAA	-15	NA	202097063	202075409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_202075567_202096929
transcript_83925.known	chr2	-	3370	3	FSM	ENSG00000222035.4	ENST00000409819.2	3370	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTATGGTTTTCAGAT	NA	False	NA	-27	True	CATAAA	-15	NA	202117058	202075409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202075567_202113505_202114589_202114928
transcript_83937.known	chr2	-	779	6	FSM	ENSG00000116030.17	ENST00000409498.6	779	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	2589.01459246564	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTTTTCAGGACATT	-5	True	NA	NA	False	TTTAAA	-21	NA	202238586	202207007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202233577_202233671_202238439
transcript_83950.known	chr2	-	831	4	FSM	ENSG00000116030.17	ENST00000392244.7	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_3	1651.10717062488	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAGGTTGAAGTCAAGA	15	True	NA	NA	False	TTTAAA	-30	NA	202238566	202206767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202238439
transcript_83957.known	chr2	-	1071	6	FSM	ENSG00000116030.17	ENST00000392245.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	2	62	junction_1	2068.58778880665	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTTACTGGATTTT	-18	True	NA	-17	True	AATAAA	-11	NA	202238599	202206186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202206804_202207252_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
transcript_83969.known	chr2	+	1994	15	FSM	ENSG00000055044.11	ENST00000264279.10	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	1028	junction_3	123.226624640977	4109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTGTGATCTCTTT	12	True	NA	18	True	AATAAA	-19	NA	202265762	202303661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920_202303058_202303385
transcript_83970.known	chr2	+	655	6	FSM	ENSG00000055044.11	ENST00000426814.5	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	596.532111457548	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTAATGAACTTATGAGA	-15	True	NA	NA	False	NA	NA	NA	202265735	202284378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202278211_202278330_202282350_202282473_202284344
transcript_83971.known	chr2	-	673	1	FSM	ENSG00000273456.1	ENST00000607928.1	673	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCTGTTATACTAAAC	507	False	NA	-3	True	AATAAA	-18	NA	202375604	202374931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202374900_202375600
transcript_83976.known	chr2	-	879	4	FSM	ENSG00000163596.17	ENST00000425178.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTCATTATACATT	NA	False	NA	NA	False	AATAAA	-23	NA	202829234	202819604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202819900_202821357_202821482_202825694_202825768_202828847
transcript_83977.known	chr2	-	694	2	FSM	ENSG00000163596.17	ENST00000476602.1	694	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTCATTATACATT	NA	False	NA	NA	False	AATAAA	-23	NA	202821756	202819604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202819900_202821357
transcript_83978.known	chr2	-	8068	13	FSM	ENSG00000138442.11	ENST00000261015.5	8068	13	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_3	50.403924009501	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTTAAAGGTGTTAAAT	-13	True	NA	NA	False	AGTAAA	-25	NA	202911673	202874260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_83979.known	chr2	-	482	2	FSM	ENSG00000138442.11	ENST00000467777.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTTGAATTCAGATTT	NA	False	NA	-16	True	ATTAAA	-28	NA	202882855	202880600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202880938_202882710
transcript_83981.known	chr2	+	5938	16	FSM	ENSG00000138380.18	ENST00000402905.7	5938	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	4.89716471258852	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGGCCAGAGATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202912213	202987063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236_202961427_202966977_202967099_202969918_202970063_202971504_202971739_202974333_202974497_202977268_202977333_202981554_202981686_202982071_202982442_202983505
transcript_83983.known	chr2	+	2854	8	FSM	ENSG00000138380.18	ENST00000444724.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.84030695602783	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGAGGTGGCGG	NA	False	NA	NA	False	AATACA	-6	NA	202912254	202963168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236
transcript_83992.nic	chr2	+	866	5	ISM	ENSG00000144426.19	ENST00000478884.5	1012	7	-196	5984	8	0	5prime_fragment	FALSE	canonical	2	9	junction_2	3.03108891324554	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTAGGTGTGAACTAAT	-19	True	NA	1	True	NA	NA	NA	203014728	203056504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813_203049976_203056426
transcript_83993.nic	chr2	+	920	4	ISM	ENSG00000144426.19	ENST00000478884.5	1012	7	-55	12240	2	80	5prime_fragment	FALSE	canonical	2	9	junction_2	3.39934634239519	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAATAAGCTAATTATC	3	True	NA	NA	False	AATAAA	-25	NA	203014869	203050248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813
transcript_83998.known	chr2	+	521	3	FSM	ENSG00000144426.19	ENST00000683927.1	521	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTGCTTTTCATTTT	12	True	NA	NA	False	AATAAA	-13	NA	203014878	203016735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203014983_203016155_203016436_203016598
transcript_84003.known	chr2	+	2545	11	FSM	ENSG00000144426.19	ENST00000682333.1	2545	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	4.6518813398452	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAGAACCTTGTTCCTTA	1	True	NA	NA	False	AATAGA	-5	NA	203014867	203096417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813_203049976_203056426_203056509_203057325_203057454_203068392_203068476_203077751_203077838_203083218_203083526_203084462_203084570_203095314
transcript_84004.known	chr2	+	498	1	FSM	ENSG00000204196.5	ENST00000431098.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	90	False	NA	-24	True	NA	NA	NA	203190779	203191277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203190800_203191300
transcript_84005.known	chr2	+	10552	13	FSM	ENSG00000119004.17	ENST00000356079.9	10552	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	32.7706677787723	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTCATTTGTTCCT	-5	True	NA	15	True	AATATA	-35	NA	203239017	203306026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_84009.known	chr2	+	1730	12	FSM	ENSG00000119004.17	ENST00000449301.5	1730	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	50.6941892769406	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGAATCATGTTTGTT	-10	True	NA	17	True	AAAAAG	-17	NA	203238976	203297242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_8401.nic	chr1	-	2012	3	ISM	ENSG00000081019.14	ENST00000476412.5	3772	8	44007	0	-252	0	3prime_fragment	FALSE	canonical	3	77	junction_1	4	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGATGCTGCTTTATTA	NA	False	NA	NA	False	NA	NA	NA	113768286	113764615	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_113766454_113767098_113767208_113768221
transcript_84010.known	chr2	+	2636	12	FSM	ENSG00000119004.17	ENST00000431118.5	2636	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.148015586924	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGGGAGGATCACTT	4	True	NA	NA	False	NA	NA	NA	203239026	203298286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203245845_203245896_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_84016.known	chr2	+	1359	11	FSM	ENSG00000119004.17	ENST00000461371.5	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	42.9855789771407	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	-5	True	NA	4	True	TATAAA	-24	NA	203238981	203297014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_84019.nic	chr2	+	1197	9	NIC	ENSG00000119004.17	novel	1359	11	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	67.9925317590101	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	NA	False	NA	4	True	TATAAA	-24	NA	203238948	203297014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_203239135_203251966_203252110_203266513_203266682_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_8402.nic	chr1	-	1286	3	ISM	ENSG00000081019.14	ENST00000615321.1	2418	7	44003	-506	-252	506	3prime_fragment	FALSE	canonical	3	77	junction_1	4	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAATCTAAA	NA	False	NA	-27	True	TTTAAA	-17	NA	113768286	113765341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_113766454_113767098_113767208_113768221
transcript_84024.known	chr2	+	1812	13	FSM	ENSG00000119004.17	ENST00000429815.6	1812	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	52.8994722720999	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGCAGAAGTTG	-5	True	NA	1	True	AAAAAG	-1	NA	203238981	203297226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272645_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_84025.known	chr2	+	6567	12	FSM	ENSG00000138443.17	ENST00000261018.12	6567	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	200.62316140606	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	2	True	NA	15	True	AATAAA	-16	NA	203328393	203432169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203382188_203382207_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_84030.known	chr2	+	6484	10	FSM	ENSG00000138443.17	ENST00000261017.9	6484	10	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_8	120.580488973082	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	-11	True	NA	19	True	AATAAA	-20	NA	203328279	203432173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_84031.nnic	chr2	+	1663	11	NNC	ENSG00000138443.17	novel	6484	10	NA	NA	18	29	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_10	159.371547021418	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAAAGGTATAACAGCAT	9	True	NA	21	True	AATAAA	-18	NA	203328299	203427598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176_203427270_203427495
transcript_84039.known	chr2	+	2240	10	FSM	ENSG00000138443.17	ENST00000424558.5	2240	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	200.966983345677	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCATCCCTTCATGT	3	True	NA	NA	False	NA	NA	NA	203328394	203427948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
transcript_84042.nnic	chr2	+	1576	10	NNC	ENSG00000138443.17	novel	1567	11	NA	NA	18	29	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_9	163.634416374497	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAAAGGTATAACAGCAT	9	True	NA	21	True	AATAAA	-18	NA	203328299	203427598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176_203427270_203427495
transcript_84048.nic	chr2	+	1773	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	3	205	junction_7	115.274400887621	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGAAATAAAATGACCAT	9	True	NA	-8	True	NA	NA	NA	203328299	203427569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_8405.known	chr1	-	2703	8	NNC	ENSG00000081019.14	novel	3772	8	NA	NA	14	506	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	26.6297363325824	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAATCTAAA	2	True	NA	-27	True	TTTAAA	-17	NA	113812275	113765341	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709_113812041_113812247
transcript_8406.known	chr1	+	3755	4	FSM	ENSG00000118655.7	ENST00000650450.2	3755	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	15.5777619273972	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCATTTTTATTTCC	-16	True	NA	21	True	AATGAA	-15	NA	113905325	113914086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113905776_113906995_113907162_113908008_113908192_113911130
transcript_84066.known	chr2	+	717	2	FSM	ENSG00000138443.17	ENST00000494215.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGATTTATGTTTACTG	28	False	NA	NA	False	GATAAA	-43	NA	203328457	203367419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203328632_203366876
transcript_84073.nnic	chr2	+	650	3	NNC	ENSG00000116117.19	novel	8492	23	NA	NA	-20149	163	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	3.5	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAAGGGCTTCGGCGCCA	NA	False	NA	111	True	AATAAA	-1	NA	205273342	205301674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_205273575_205300529_205300737_205301463
transcript_84075.known	chr2	+	2386	10	FSM	ENSG00000118257.17	ENST00000417189.5	2386	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	45.7742717103974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCCAGGCACTGTGC	7	True	NA	12	True	AATAAA	-23	NA	205682506	205743698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_205682906_205683090_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202
transcript_84076.known	chr2	+	6644	17	FSM	ENSG00000118257.17	ENST00000357785.10	6644	17	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_15	22.4185156455551	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTCTGCATCGTGGTT	1	True	NA	8	True	AATAAA	-15	NA	205682500	205798131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202_205743553_205745745_205745891_205749724_205749842_205752834_205752976_205763673_205763937_205765473_205765571_205766782_205766804_205792234_205792286_205794753
transcript_84077.known	chr2	+	3367	16	FSM	ENSG00000118257.17	ENST00000357118.8	3367	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	39.4472925419336	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGCTGGGTTTCTGTT	144	False	NA	57	True	NA	NA	NA	205683259	205777156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_205683364_205697543_205697722_205716192_205716375_205722477_205722709_205723784_205723941_205725912_205726083_205727890_205728047_205740518_205740664_205743202_205743553_205745745_205745891_205749724_205749842_205752834_205752976_205763673_205763937_205765473_205765571_205766782_205766804_205776245
transcript_8408.known	chr1	+	1960	3	FSM	ENSG00000118655.7	ENST00000648795.1	1960	3	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	25	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAACTTAATCTGTTTAA	-9	True	NA	15	True	ATTAAA	-18	NA	113905332	113912464	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113905776_113908008_113908192_113911130
transcript_84082.known	chr2	+	515	3	FSM	ENSG00000118257.17	ENST00000472299.5	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	4.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCATTGTCCAACGGG	NA	False	NA	NA	False	GATAAA	-8	NA	205763800	205767064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_205763937_205765473_205765571_205766782
transcript_84083.nic	chr2	+	633	3	ISM	ENSG00000118257.17	ENST00000467850.1	694	5	-1	27961	-1	96	5prime_fragment	FALSE	canonical	1	2	junction_1	76.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTATAAATTAAAAGTGA	471	False	NA	NA	False	NA	NA	NA	205764335	205767160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_205764494_205765473_205765571_205766782
transcript_84084.known	chr2	+	1072	2	FSM	ENSG00000118257.17	ENST00000478013.1	1072	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTATGGTGGAAAGAGCC	158	False	NA	16	True	AATAAA	-16	NA	205682657	205697909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_205683364_205697543
transcript_84098.nic	chr2	-	802	4	ISM	ENSG00000114933.16	ENST00000403263.6	14128	11	-141	63177	-12	6008	5prime_fragment	FALSE	canonical	3	7	junction_3	5.09901951359278	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAGGAAGAAAAAGAATGA	NA	False	NA	NA	False	NA	NA	NA	206086315	206056897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206056944_206062798_206063046_206063150_206063245_206085900
transcript_8410.known	chr1	-	571	3	FSM	ENSG00000235527.7	ENST00000441071.5	571	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTCATCGTCTCTATA	1330	False	NA	NA	False	AATAAA	-17	NA	113929318	113923999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113924333_113928243_113928389_113929225
transcript_84100.known	chr2	+	752	2	FSM	ENSG00000227946.2	ENST00000420509.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTAATATTTTTTT	NA	False	NA	NA	False	NA	NA	NA	206084604	206086564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206084749_206085956
transcript_84102.known	chr2	-	14128	11	FSM	ENSG00000114933.16	ENST00000403263.6	14128	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	5.01597448159378	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTTTTTAGTTTAATT	-34	True	NA	-6	True	AATAAA	-16	NA	206086174	205993720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206005534_206007283_206007442_206009576_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206063046_206063150_206063245_206085900
transcript_84103.known	chr2	-	1664	8	FSM	ENSG00000114933.16	ENST00000424117.5	1664	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	7.10848874549984	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACACAAGAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	206063244	206009704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206062955_206063150
transcript_84104.known	chr2	-	2371	19	FSM	ENSG00000023228.14	ENST00000449699.5	2371	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	101.751042704033	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAATAATAATT	324	False	NA	-43	True	NA	NA	NA	206159194	206124100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159095
transcript_84110.known	chr2	-	11660	19	FSM	ENSG00000023228.14	ENST00000233190.11	11660	19	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_5	38.0975437463647	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGGATCAATTAACATG	-4	True	NA	-31	True	AATAAA	-17	NA	206159444	206114816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159340
transcript_84111.known	chr2	-	2631	18	FSM	ENSG00000023228.14	ENST00000423725.5	2631	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	100.988916449652	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGATTTAAGCACC	9	False	NA	76	True	ATTAAA	-21	NA	206159509	206123818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206153617_206153683_206159340
transcript_84115.known	chr2	+	912	8	FSM	ENSG00000114942.14	ENST00000429769.5	912	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	1806.99778073794	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATATGCTGGAGGAGC	10	True	NA	-93	True	GATAAA	-6	NA	206159635	206162801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206160886_206161133_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_84118.known	chr2	+	880	7	FSM	ENSG00000114942.14	ENST00000392221.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	1300.95752129815	7019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTCTTGAGTATG	-32	True	NA	33	True	AATAAA	-14	NA	206159593	206162927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_84121.known	chr2	+	844	7	FSM	ENSG00000114942.14	ENST00000236957.9	844	7	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_1	1129.30106211271	13586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	-41	True	NA	34	True	AATAAA	-15	NA	206159584	206162928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_84133.known	chr2	+	701	3	FSM	ENSG00000114942.14	ENST00000479587.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_1	1543.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTAAATCATAGTGAG	-11	True	NA	NA	False	AATGAA	-26	NA	206159614	206161117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206159685_206159958_206160060_206160587
transcript_84134.known	chr2	+	808	6	FSM	ENSG00000114942.14	ENST00000392222.7	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	3535	junction_2	182.164101842267	29556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	-5	True	NA	34	True	AATAAA	-15	NA	206159894	206162928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_84135.known	chr2	+	515	5	FSM	ENSG00000114942.14	ENST00000445505.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	1473.18031822313	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAATATGAATCAAAGAAA	-19	True	NA	NA	False	NA	NA	NA	206159606	206162077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037
transcript_84136.known	chr2	+	670	6	FSM	ENSG00000114942.14	ENST00000455150.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1530.91353119632	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGTGCAGTCCATGGAT	8	False	NA	-55	True	GATAAA	-44	NA	206159933	206162839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206160019_206160556_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_84138.known	chr2	-	592	3	FSM	ENSG00000183671.13	ENST00000439932.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTTTTCTTCTCTTTC	4327	False	NA	NA	False	NA	NA	NA	206213744	206176999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206177276_206213306_206213426_206213547
transcript_84140.known	chr2	+	8920	8	FSM	ENSG00000204186.10	ENST00000649285.1	8920	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	4.4629998148038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAGTAATTATGTTTAA	-18	True	NA	NA	False	NA	NA	NA	206275009	206313300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206275080_206279539_206279593_206280549_206280594_206281800_206281910_206292013_206292117_206297245_206297374_206304716_206306876_206307046
transcript_84141.known	chr2	+	10303	6	FSM	ENSG00000204186.10	ENST00000649650.1	10303	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3.49857113690718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTCTCTCTTCAT	3	True	NA	18	True	ATTAAA	-9	NA	206274688	206314427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206274947_206279539_206279593_206280549_206280594_206281800_206281910_206297245_206297374_206304716
transcript_84148.nic	chr2	-	1509	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-42	16210	0	2152	5prime_fragment	FALSE	canonical	2	10	junction_4	7.43303437365925	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGGATTATGATATCT	-5	True	NA	NA	False	AATAAA	-24	NA	206765328	206754466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_84149.nic	chr2	-	1205	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-43	16515	-1	1847	5prime_fragment	FALSE	canonical	2	10	junction_4	7.43303437365925	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTATTCAGGTGATA	-6	True	NA	-17	True	AATAAA	-18	NA	206765329	206754771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_84150.nic	chr2	-	1115	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-40	16602	0	1760	5prime_fragment	FALSE	canonical	2	10	junction_4	7.43303437365925	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGCAAACATTTTTT	-3	True	NA	-104	True	TATAAA	-32	NA	206765326	206754858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_84151.known	chr2	-	722	4	FSM	ENSG00000138400.13	ENST00000471988.1	722	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	6.97614984548545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGACTGTTGCTCTCT	-12	True	NA	NA	False	AAAACA	-35	NA	206765301	206756618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206757041_206757236_206757372_206760900_206761014_206765249
transcript_84152.known	chr2	-	1757	11	FSM	ENSG00000138400.13	ENST00000449792.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.48587060943071	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTACATTAAAATAGAGTT	-3	True	NA	NA	False	NA	NA	NA	206765326	206738224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206738512_206739592_206739662_206741053_206741105_206745621_206745674_206746286_206746427_206749019_206749184_206750933_206751076_206755008_206755506_206756897_206757041_206757236_206757372_206765249
transcript_84153.known	chr2	+	3188	12	FSM	ENSG00000118246.14	ENST00000236980.10	3188	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	70.6361881359701	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGGACTATTTTTTC	NA	False	NA	25	True	ATTAAA	-28	NA	206765356	206792509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206765655_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_84157.known	chr2	+	2344	12	FSM	ENSG00000118246.14	ENST00000403094.3	2344	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	122.51476551255	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTTTTCATATT	5	True	NA	-3	True	AATAAA	-4	NA	206765605	206791806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206765763_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_8417.nnic	chr1	-	836	6	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	44.0980725202361	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	NA	False	NA	-16	True	ATTAAA	-24	NA	114032248	114014903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_114015170_114016060_114016157_114021928_114022043_114022679_114022781_114026725_114026776_114032039
transcript_84179.nnic	chr2	-	767	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	36	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	1	True	AATAAA	-22	NA	206812330	206806875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_206807239_206810036_206810139_206812028
transcript_84181.nnic	chr2	-	837	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_2	36	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	1	True	AATAAA	-22	NA	206812343	206806875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_206807239_206810036_206810196_206812028
transcript_84184.nnic	chr2	-	765	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	114	junction_1	0	729	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	1	True	AATAAA	-22	NA	206812430	206806875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_206807239_206812028
transcript_8420.nnic	chr1	-	873	6	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	43.6458474542539	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	NA	False	NA	-16	True	ATTAAA	-24	NA	114032248	114014903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_114015170_114020528_114020662_114021928_114022043_114022679_114022781_114026725_114026776_114032039
transcript_84207.known	chr2	-	8365	4	FSM	ENSG00000118263.15	ENST00000309446.11	8365	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	1.63299316185545	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCTAGTGTGACTGAA	-4	True	NA	NA	False	AATAAA	-16	NA	207165948	207074136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466
transcript_84222.known	chr2	+	7650	9	FSM	ENSG00000118260.15	ENST00000432329.6	7650	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	57.4280800218848	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	152	False	NA	21	True	CATAAA	-18	NA	207529891	207603431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_84239.known	chr2	+	10095	8	FSM	ENSG00000118260.15	ENST00000353267.8	10095	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	37.3188139890729	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAAGGCTTTCCTTT	10	True	NA	NA	False	ATTAAA	-18	NA	207529961	207605988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_84246.known	chr2	+	2005	8	FSM	ENSG00000118260.15	ENST00000430624.5	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	76.6401610496369	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAAAGCATGGTATT	-3	True	NA	14	True	ATTAAA	-15	NA	207529736	207597789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_84272.known	chr2	-	1003	4	FSM	ENSG00000144401.14	ENST00000442521.1	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	264.126653120977	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATTTAATGAAATGTCT	NA	False	NA	NA	False	NA	NA	NA	207625927	207612979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625676
transcript_84274.known	chr2	-	1770	4	FSM	ENSG00000144401.14	ENST00000448007.6	1770	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	275.885644586464	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCAC	412	False	NA	NA	False	NA	NA	NA	207624983	207612103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207624841
transcript_84284.known	chr2	-	4805	4	FSM	ENSG00000144401.14	ENST00000411432.5	4805	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	210.073003183814	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCATTCTGTGATATAC	-3	True	NA	-15	True	AATAAA	-16	NA	207625249	207609114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625061
transcript_84285.known	chr2	-	1103	4	FSM	ENSG00000144401.14	ENST00000406927.6	1103	4	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	51.3290041464538	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGGCCGGTATAAAGAA	17	False	NA	-26	True	AATAAA	-19	NA	207625378	207612742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625264
transcript_84286.known	chr2	-	869	2	FSM	ENSG00000144401.14	ENST00000448823.2	869	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTCTTTAAATGAGTAA	1015	False	NA	-10	True	AATAAA	-35	NA	207624380	207612726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207624228
transcript_84288.known	chr2	+	3813	10	FSM	ENSG00000163249.13	ENST00000295414.8	3813	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	17.5499287747842	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTAGTGTGTTTGTAA	-2	True	NA	NA	False	AATAAA	-18	NA	207711639	207756174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_8429.nnic	chr1	-	740	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	78	junction_4	10.9544511501033	559	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	NA	False	NA	-16	True	ATTAAA	-24	NA	114032248	114014903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032039
transcript_84292.known	chr2	+	2124	9	FSM	ENSG00000163249.13	ENST00000650811.1	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	41.6713330720293	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTAGCCTCAGCCACAC	154	False	NA	NA	False	NA	NA	NA	207711795	207754742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_84294.known	chr2	+	2619	8	FSM	ENSG00000163249.13	ENST00000339882.9	2619	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	61.8332187321306	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGTCTGTAGTCCC	109	False	NA	NA	False	AATAAA	-16	NA	207711750	207755244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_84299.nic	chr2	+	888	7	ISM	ENSG00000163249.13	ENST00000392209.7	1952	11	203	12028	-8	-8677	internal_fragment	FALSE	canonical	3	155	junction_3	19.1724628916927	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAGAACTTTAAGAGAA	101	False	NA	7	True	AATAAA	-19	NA	207711742	207742437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222
transcript_84301.nic	chr2	+	755	6	ISM	ENSG00000163249.13	ENST00000452312.1	709	8	-279	8680	25	-8680	5prime_fragment	FALSE	canonical	3	42	junction_5	58.1673447906985	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCATCAGAACTTTAAGA	179	False	NA	4	True	AATAAA	-16	NA	207711820	207742434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207742222
transcript_84304.nic	chr2	+	708	6	ISM	ENSG00000163249.13	ENST00000650811.1	2124	9	26	12305	26	-8677	5prime_fragment	FALSE	canonical	3	63	junction_3	50.6872765099882	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAGAACTTTAAGAGAA	180	False	NA	7	True	AATAAA	-19	NA	207711821	207742437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207740654_207740707_207742222
transcript_84307.known	chr2	+	952	2	FSM	ENSG00000163249.13	ENST00000420822.1	952	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGGCATTTGCCTATTAT	6	True	NA	NA	False	AATAAA	-20	NA	207711647	207714824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207712117_207714341
transcript_84308.known	chr2	-	564	1	FSM	ENSG00000272851.1	ENST00000609146.1	564	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCATTCTTTCCTGTGG	NA	False	NA	-2	True	ATTAAA	-33	NA	207754435	207753871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207753900_207754400
transcript_84309.known	chr2	-	9774	8	FSM	ENSG00000178385.15	ENST00000427836.8	9774	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4.1206300291017	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCTTTCTCATAACAAC	2	True	NA	-14	True	AATAAA	-15	NA	208025527	207821287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207828497_207861104_207861263_207908513_207908578_207930925_207931120_207946366_207946513_207976650_207977587_208001029_208001958_208025388
transcript_8431.nnic	chr1	-	663	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	34	junction_4	27.3313007374329	171	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	NA	False	NA	-16	True	ATTAAA	-24	NA	114032350	114014903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032218
transcript_84310.nic	chr2	-	2774	3	ISM	ENSG00000178385.15	ENST00000457206.1	3689	8	-53	75863	-24	-75863	5prime_fragment	FALSE	canonical	3	8	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTGCCAGGTGCAGT	-22	True	NA	NA	False	AGTAAA	-20	NA	208025551	207975903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_207977587_208001029_208001958_208025388
transcript_84312.nnic	chr2	-	751	3	FSM	ENSG00000229150.2	ENST00000440809.2	621	3	-130	0	-130	0	multi-exon	TRUE	canonical	3	34	junction_2	56.5	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	NA	False	NA	-7	True	AATAAA	-24	NA	208112782	208108157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208108497_208112265_208112509_208112613
transcript_84316.known	chr2	-	528	2	FSM	ENSG00000229150.2	ENST00000412192.1	528	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACTGAAATGTTTGTAC	141	False	NA	-82	True	NA	NA	NA	208112511	208108232	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208108515_208112265
transcript_84317.nnic	chr2	-	703	3	Fusion	ENSG00000118231.5_ENSG00000229150.2	novel	621	3	NA	NA	-61	0	multi-exon	TRUE	canonical	2	16	junction_2	28	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	5304	False	NA	-7	True	AATAAA	-24	NA	208124585	208108157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_-_208108497_208124111_208124355_208124464
transcript_84318.known	chr2	-	642	3	FSM	ENSG00000118231.5	ENST00000264376.5	642	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	3	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGCTTGTGTCTTTC	-2	True	NA	-3	True	AATAAA	-24	NA	208124524	208121606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208121946_208124111_208124355_208124464
transcript_84319.nic	chr2	-	701	2	ISM	ENSG00000118231.5	ENST00000264376.5	642	3	51	0	51	0	intron_retention	FALSE	canonical	3	22	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGCTTGTGTCTTTC	5416	False	NA	-3	True	AATAAA	-24	NA	208124473	208121606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_208121946_208124111
transcript_84320.known	chr2	-	1078	2	FSM	ENSG00000224529.1	ENST00000415505.1	1078	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGCAGAGGCTTTATTG	8459	False	NA	NA	False	GGGGCT	-41	NA	208137697	208135393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208135921_208137146
transcript_84321.known	chr2	-	631	3	FSM	ENSG00000182187.4	ENST00000260988.5	631	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAGAGCCCTGTCTTTC	-2	True	NA	NA	False	AATAAA	-24	NA	208146158	208142572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208142914_208145773_208146017_208146111
transcript_84322.nic	chr2	-	1131	8	NIC	ENSG00000188674.11	novel	1195	9	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.67486401886892	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTCTCTCAGTAGACTA	3183	False	NA	67	True	AATAAA	-21	NA	208187076	208165342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_208165816_208168381_208168496_208171987_208172076_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945
transcript_84323.known	chr2	-	1195	9	FSM	ENSG00000188674.11	ENST00000341287.9	1195	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.14174095030078	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCTTTCTCTCAGTAG	-5	True	NA	63	True	AATAAA	-17	NA	208190030	208165346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208165816_208170944_208171064_208171987_208172076_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945_208187062_208189952
transcript_84327.nic	chr2	-	984	7	NIC	ENSG00000188674.11	novel	1195	9	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	5.36708072936821	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTCAATAAAGCATTAA	3183	False	NA	34	True	TTTAAA	-1	NA	208187076	208165375	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_208165816_208171987_208172076_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945
transcript_84333.known	chr2	-	2441	10	FSM	ENSG00000138413.14	ENST00000415913.5	2441	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	1681.74380397914	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGATTTTAATTAAAAT	790	False	NA	-41	True	ATTAAA	-23	NA	208254322	208236264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254030
transcript_84335.known	chr2	-	2298	10	FSM	ENSG00000138413.14	ENST00000446179.5	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	1679.94523720269	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTCTGCGTTTCTGT	654	False	NA	-8	True	ATTAAA	-16	NA	208254458	208236231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254342
transcript_84338.known	chr2	-	702	5	FSM	ENSG00000138413.14	ENST00000417583.5	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	2324.29785096489	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATCACTCCTGATGAGA	NA	False	NA	NA	False	TATAAA	-28	NA	208255798	208248561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938_208255060_208255528
transcript_84341.known	chr2	+	464	2	FSM	ENSG00000231908.2	ENST00000440574.2	497	2	33	0	33	0	multi-exon	FALSE	canonical	3	57	junction_1	0	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGCTTGTATATTGCT	19	False	NA	26	True	AATAAA	-31	NA	208255246	208256181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_208255432_208255902
transcript_84342.known	chr2	+	489	2	FSM	ENSG00000231908.2	ENST00000448588.1	489	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAGGACAATAGCATG	172	False	NA	13	True	AATAAA	-18	NA	208255399	208256168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_208255623_208255902
transcript_84343.known	chr2	-	2318	10	FSM	ENSG00000138413.14	ENST00000345146.7	2318	10	0	0	0	0	multi-exon	FALSE	canonical	3	4400	junction_2	506.555250907759	7123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGCGTTTCTGTTTA	2	True	NA	-5	True	ATTAAA	-19	NA	208255071	208236228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
transcript_84344.known	chr2	-	1614	4	FSM	ENSG00000138413.14	ENST00000462386.5	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_3	331.365189615459	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATTGCTTCTTTACTT	12	True	NA	NA	False	ACTAAA	-23	NA	208255061	208247381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208248661_208251429_208251568_208253885_208253960_208254938
transcript_84345.known	chr2	-	556	3	FSM	ENSG00000138413.14	ENST00000481557.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	5024	junction_2	372	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAAAGGGA	-1	True	NA	NA	False	TTTAAA	-2	NA	208255113	208251260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208251568_208253885_208253960_208254938
transcript_84347.nic	chr2	+	823	2	ISM	ENSG00000115020.17	ENST00000422495.5	792	7	-16	13542	-16	-13542	5prime_fragment	FALSE	canonical	3	67	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAATGTTAAAAGGAGATT	0	True	NA	NA	False	AATAAA	-15	NA	208266340	208272258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_208266416_208271510
transcript_84348.known	chr2	+	633	2	FSM	ENSG00000232799.1	ENST00000418459.1	633	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTACTCTATCCTT	NA	False	NA	NA	False	NA	NA	NA	209145240	209147687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_209145602_209147415
transcript_84350.known	chr2	+	2241	15	FSM	ENSG00000078018.21	ENST00000199940.10	2241	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.87562760699626	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGTAATTGTTACAATT	-23	True	NA	NA	False	AATAAA	-17	NA	209424057	209730518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_209424277_209507591_209507642_209580035_209580101_209625052_209625130_209653141_209653433_209678571_209678686_209680749_209680828_209700276_209700339_209704449_209704621_209705579_209705728_209709913_209710255_209723594_209723688_209725708_209725791_209729849_209729963_209730181
transcript_84356.known	chr2	+	967	6	FSM	ENSG00000078018.21	ENST00000471619.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.52050418832953	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAACACATATTTGCTGC	-11	True	NA	NA	False	NA	NA	NA	209661464	209710264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_209661679_209678571_209678686_209680749_209680828_209700276_209700339_209705579_209705728_209709913
transcript_8437.known	chr1	+	1934	4	FSM	ENSG00000116774.12	ENST00000369551.5	1934	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	104.231579774185	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	-28	True	NA	17	True	ATTAAA	-18	NA	113979440	113982254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113979631_113979974_113980127_113980331_113980618_113980948
transcript_84372.known	chr2	+	1128	7	FSM	ENSG00000197713.15	ENST00000436630.6	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_3	227.327712540484	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCATATTAGCTACACTA	NA	False	NA	NA	False	NA	NA	NA	210002583	210020100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_84377.known	chr2	+	925	7	FSM	ENSG00000197713.15	ENST00000429907.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	265.151948051595	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGAGGTCAGAAATTG	10	True	NA	17	True	ATTAAA	-18	NA	210002641	210019940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210018152_210018222_210019668
transcript_84386.known	chr2	+	2511	7	FSM	ENSG00000197713.15	ENST00000429921.5	2511	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	264.867734287638	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCAGTATTGAATTGA	-4	True	NA	25	True	AATAAA	-25	NA	210002627	210021576	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210003437_210003469_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_84391.known	chr2	+	858	6	FSM	ENSG00000197713.15	ENST00000435437.2	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	233.801967485306	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	25	False	NA	38	True	ATTAAA	-39	NA	210002656	210019961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019672
transcript_84397.known	chr2	+	2130	6	FSM	ENSG00000197713.15	ENST00000454822.5	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	257.629656677953	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTTGAGGCTACTAT	-4	True	NA	NA	False	AATAAA	-17	NA	210002627	210021226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_84402.known	chr2	+	792	6	FSM	ENSG00000197713.15	ENST00000411934.6	792	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	295.892953616675	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	24	False	NA	38	True	ATTAAA	-39	NA	210002655	210019961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002773_210003437_210003458_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_84408.known	chr2	+	796	5	FSM	ENSG00000197713.15	ENST00000438204.6	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	234.523319736013	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	11	True	NA	38	True	ATTAAA	-39	NA	210002642	210019961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_84414.known	chr2	-	2515	11	FSM	ENSG00000115361.8	ENST00000233710.4	2515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.19089023002066	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTAACATGGAAACAGAT	-1	True	NA	NA	False	AATAAA	-17	NA	210225447	210187922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210189055_210192803_210192891_210195210_210195339_210203330_210203445_210204580_210204683_210205631_210205797_210210195_210210263_210216346_210216512_210217964_210218103_210220646_210220803_210225186
transcript_84415.known	chr2	-	4592	10	FSM	ENSG00000115365.12	ENST00000450366.7	4592	10	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_9	40.0844786931147	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCATGTGCTTTTTGT	-28	True	NA	-8	True	AATAAA	-18	NA	210476759	210431250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476619
transcript_84416.known	chr2	-	1270	10	FSM	ENSG00000115365.12	ENST00000431941.6	1270	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	103.005932946711	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATAGCATGCCACCTGC	811	False	NA	NA	False	NA	NA	NA	210476775	210434486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476721
transcript_84417.nic	chr2	-	4587	10	NIC	ENSG00000115365.12	novel	4592	10	NA	NA	68	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_9	106.702077455565	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCATGTGCTTTTTGT	2	True	NA	-8	True	AATAAA	-18	NA	210477584	210431250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210477449
transcript_84427.known	chr2	-	4781	9	FSM	ENSG00000115365.12	ENST00000443314.5	4781	9	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_5	22.0794021658196	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-8	True	NA	-6	True	AATAAA	-20	NA	210476739	210431248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315
transcript_84428.known	chr2	-	4503	10	FSM	ENSG00000115365.12	ENST00000441020.7	4503	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	119.366020766298	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-26	True	NA	-6	True	AATAAA	-20	NA	210476757	210431248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476708
transcript_84429.known	chr2	-	1647	10	FSM	ENSG00000115365.12	ENST00000233714.8	1647	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	118.437773420643	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACTATTATTGGGTA	26	True	NA	NA	False	GATAAA	-7	NA	210476705	210434114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476646
transcript_84443.known	chr2	+	1250	5	FSM	ENSG00000144451.20	ENST00000432529.6	1250	5	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_3	31.7411404962078	2030	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATACTGTTTTCCAT	NA	False	NA	25	True	AATAAA	-21	NA	213284391	213317978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_213284620_213296063_213296111_213297261_213297358_213310058_213310178_213317218
transcript_84453.known	chr2	-	5478	11	FSM	ENSG00000138376.11	ENST00000260947.9	5478	11	0	0	0	0	multi-exon	TRUE	canonical	3	94	junction_8	20.4550727204769	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCGTTTAAGAGCTGTAA	0	True	NA	-11	True	AATAAA	-18	NA	214809683	214725645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214792296_214792446_214797060_214797118_214809411
transcript_84454.known	chr2	-	2131	11	FSM	ENSG00000138376.11	ENST00000613706.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	43.124123179492	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAGAGTCATTCATATT	0	True	NA	-26	True	NA	NA	NA	214809683	214728584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780967_214781510_214792296_214792446_214797060_214797118_214809411
transcript_84455.known	chr2	-	2261	10	FSM	ENSG00000138376.11	ENST00000455743.5	2261	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	45.7588957822397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGCTTCCTCTTG	10	True	NA	NA	False	NA	NA	NA	214809673	214728703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214797060_214797118_214809411
transcript_84456.known	chr2	-	1456	10	FSM	ENSG00000138376.11	ENST00000620057.4	1456	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	46.7390972300123	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTATACCAGATGAACA	0	True	NA	-118	True	NA	NA	NA	214809642	214728676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214792296_214792446_214797060_214797118_214809411
transcript_84458.known	chr2	-	1111	6	FSM	ENSG00000138376.11	ENST00000613374.5	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	57.1153219372875	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTGAATCAAAAAAAAAAA	0	True	NA	-3	True	NA	NA	NA	214809642	214728561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214809411
transcript_84459.nic	chr2	-	823	4	ISM	ENSG00000138376.11	ENST00000613706.5	2131	11	-81	52661	-81	-349	5prime_fragment	FALSE	canonical	3	94	junction_1	21.9544984001001	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAGCTGAAATCAACCAA	NA	False	NA	NA	False	AAAAAG	-38	NA	214809764	214781245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_214781510_214792296_214792446_214797060_214797118_214809411
transcript_84460.known	chr2	-	703	3	FSM	ENSG00000138376.11	ENST00000613192.2	703	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTATACCAGATGAACAT	0	True	NA	-117	True	NA	NA	NA	214809683	214728675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214809411
transcript_84461.nic	chr2	-	669	3	ISM	ENSG00000138376.11	ENST00000455743.5	2261	10	-91	52547	-81	-354	5prime_fragment	FALSE	canonical	2	3	junction_1	69.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAACTTTAGCTGAAATCA	NA	False	NA	NA	False	AAAAAG	-33	NA	214809764	214781250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_214781510_214797060_214797118_214809411
transcript_84462.known	chr2	-	872	2	FSM	ENSG00000138376.11	ENST00000471787.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTCCAGTCCCATTT	13	True	NA	NA	False	AAGAAA	-42	NA	214809670	214780896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214781510_214809411
transcript_84463.known	chr2	-	573	2	FSM	ENSG00000138376.11	ENST00000479904.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAATTCAAATAGATGT	23	True	NA	NA	False	NA	NA	NA	214809660	214796793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214797118_214809411
transcript_84467.known	chr2	+	2089	3	FSM	ENSG00000229267.3	ENST00000664818.1	2089	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGCATCATCTGATAC	1032	False	NA	NA	False	NA	NA	NA	214810216	214963565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_214810433_214833988_214834106_214961809
transcript_84468.known	chr2	+	318	1	FSM	ENSG00000230076.1	ENST00000457497.1	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCAATGTGCTGCCC	NA	False	NA	-58	True	NA	NA	NA	214847127	214847445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_214847100_214847400
transcript_84469.known	chr2	+	2187	16	FSM	ENSG00000138363.15	ENST00000443953.5	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	199.520246814425	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATAGTTTTTGGTAGTT	-16	True	NA	27	True	AATAAA	-22	NA	215312071	215349763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_215312391_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_84470.known	chr2	+	1972	16	FSM	ENSG00000138363.15	ENST00000236959.14	1972	16	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_10	57.6537557801359	3620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATAGTTTTTGGTAGTTG	-29	True	NA	28	True	AATAAA	-23	NA	215312058	215349764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_215312162_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_84475.known	chr2	-	2388	13	FSM	ENSG00000115414.21	ENST00000426059.1	2388	13	0	0	0	0	multi-exon	FALSE	canonical	3	2199	junction_8	167.724642064175	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGATTTTGGTTTTGGTTT	-5	True	NA	NA	False	ATTAAA	-17	NA	215436073	215414660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_215414959_215419241_215419386_215420672_215420802_215422090_215422244_215423349_215423527_215424145_215424326_215425093_215425286_215428179_215428339_215430714_215430853_215431832_215431965_215433323_215433462_215434695_215434825_215435654
transcript_84476.known	chr2	+	131	2	FSM	ENSG00000230695.2	ENST00000412951.1	131	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTTGGACCAGCTGTG	212	False	NA	NA	False	NA	NA	NA	215436252	215436992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_215436310_215436918
transcript_84482.known	chr2	-	1867	8	FSM	ENSG00000115425.14	ENST00000265322.8	1867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	32.0707126868877	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCAGTGCCTGATTT	-8	True	NA	-6	True	TATAAA	-37	NA	216081809	216038387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_216039361_216043903_216044016_216049262_216049374_216051448_216051546_216058894_216058977_216065311_216065478_216066384_216066519_216081617
transcript_84486.nnic	chr2	-	2296	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	160	-7	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAGCTGGATGTGTGT	220	False	NA	-6	True	ATTAAA	-16	NA	216013391	215942590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_215943596_215944280_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_84489.nnic	chr2	-	2114	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	160	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	46.6630474787063	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAGCTGGATGTGTGT	220	False	NA	-6	True	ATTAAA	-16	NA	216013391	215942590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_215943606_215944472_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_8449.known	chr1	+	1748	3	FSM	ENSG00000116774.12	ENST00000320334.5	1748	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	11.5	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTGTGTTTGTTTGG	5	True	NA	16	True	ATTAAA	-17	NA	113979473	113982253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113979631_113980331_113980618_113980948
transcript_84491.nnic	chr2	-	2087	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	160	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTCGTATTGTTTTACT	220	False	NA	-28	True	AATAAA	-15	NA	216013391	215942802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_215943588_215944269_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_84493.nnic	chr2	-	2081	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	160	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	46.6630474787063	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGTCGTATTGTTTT	220	False	NA	-31	True	AATAAA	-12	NA	216013391	215942805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_215943596_215944280_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_84498.known	chr2	-	3148	5	FSM	ENSG00000118242.16	ENST00000263268.11	3148	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	6.49519052838329	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTGTGTTATATTT	-10	True	NA	1	True	ATTAAA	-23	NA	216013551	215942583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_84502.known	chr2	+	3322	3	FSM	ENSG00000163449.11	ENST00000437356.7	3322	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGAGGCTCTTC	15	True	NA	15	True	AATAAA	-27	NA	216081918	216102783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216081980_216095837_216096235_216099919
transcript_84505.nnic	chr2	-	1148	3	NNC	ENSG00000118242.16	novel	3148	5	NA	NA	160	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGTCGTATTGTTTT	220	False	NA	-31	True	AATAAA	-12	NA	216013391	215942805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_215943716_215996386_215996466_216013232
transcript_84506.nnic	chr2	+	901	2	NNC	ENSG00000163449.11	novel	3322	3	NA	NA	11	-17048	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATCATCCTTTTGTTGG	-27	True	NA	13	True	AATAAA	-1	NA	216081876	216082905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_216081980_216082107
transcript_84508.nic	chr2	+	850	2	ISM	ENSG00000163449.11	ENST00000455479.5	578	4	-30	17048	-6	-17048	5prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATCATCCTTTTGTTGG	-15	True	NA	13	True	AATAAA	-1	NA	216081888	216082905	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_216081980_216082146
transcript_84509.known	chr2	+	3342	3	FSM	ENSG00000163449.11	ENST00000295658.8	3342	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGAGGCTCTTC	-9	True	NA	15	True	AATAAA	-27	NA	216081894	216102783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216081976_216095837_216096235_216099919
transcript_84517.known	chr2	+	3379	21	FSM	ENSG00000079246.16	ENST00000392132.7	3379	21	0	0	0	0	multi-exon	FALSE	canonical	3	4274	junction_7	355.893382911231	12130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTAATTATTGTCTG	2	True	NA	44	True	ATTAAA	-28	NA	216109347	216206293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_84518.known	chr2	+	2116	1	FSM	ENSG00000279348.1	ENST00000623250.1	2116	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGTAAAATCTTTGG	NA	False	NA	NA	False	AATAAA	-34	NA	216211403	216213519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216211400_216213500
transcript_84519.known	chr2	+	3148	1	FSM	ENSG00000260804.3	ENST00000562038.1	3148	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGTCTCTTTGGCGTCT	NA	False	NA	22	True	AATAAA	-23	NA	216217044	216220192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216217000_216220200
transcript_84521.known	chr2	+	3201	18	FSM	ENSG00000138375.13	ENST00000357276.9	3201	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	36.1599675414008	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGAGCTTCTCTTGCC	-11	True	NA	44	True	AATAAA	-22	NA	216412483	216483053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216412649_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_84523.known	chr2	+	3056	18	FSM	ENSG00000138375.13	ENST00000358207.9	3056	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	38.2326695931824	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	185	False	NA	8	True	AATAAA	-17	NA	216412742	216483017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216412799_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_84527.known	chr2	-	584	2	FSM	ENSG00000232485.4	ENST00000431856.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTTTCCAGCTCCATT	-2	True	NA	NA	False	NA	NA	NA	216498750	216487803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_216488244_216498606
transcript_84528.nnic	chr2	-	421	2	FSM	ENSG00000232485.4	ENST00000686779.1	409	2	-13	1	-13	-1	multi-exon	FALSE	canonical	2	8	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGTGGGAAGATCATT	2580	False	NA	NA	False	ATTAAA	-19	NA	216498783	216497589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_216497834_216498606
transcript_84529.known	chr2	+	711	3	FSM	ENSG00000138375.13	ENST00000444508.5	711	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	70	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGGTCCCTAAACAACAG	15	True	NA	NA	False	NA	NA	NA	216412509	216415095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216412735_216413855_216413893_216414646
transcript_8453.known	chr1	+	1961	3	FSM	ENSG00000116774.12	ENST00000393300.6	1961	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.5	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	NA	False	NA	17	True	ATTAAA	-18	NA	113979390	113982254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113979631_113980202_113980618_113980948
transcript_84537.known	chr2	+	742	3	FSM	ENSG00000197756.10	ENST00000359681.3	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	12844	junction_1	66	84482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	23	False	NA	17	True	AATAAA	-23	NA	216498866	216501467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216499399_216499948_216500032_216501340
transcript_84538.known	chr2	+	2992	4	FSM	ENSG00000197756.10	ENST00000491306.6	2992	4	0	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	1836.44003441441	398011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCCATTTCATTGTATC	0	True	NA	-59	True	TATAAA	-26	NA	216498843	216504086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216501340
transcript_84539.known	chr2	+	401	4	FSM	ENSG00000197756.10	ENST00000456586.5	401	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6086.07094565579	65656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGCCTTGGCTTGTTA	0	True	NA	13	True	AATAAA	-19	NA	216499085	216501463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216499152_216499269_216499399_216499948_216500032_216501340
transcript_84540.known	chr2	+	1701	3	FSM	ENSG00000197756.10	ENST00000490649.1	1701	3	0	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	1914	1557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	11	False	NA	17	True	AATAAA	-23	NA	216498824	216501467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499948
transcript_84541.known	chr2	+	495	4	FSM	ENSG00000197756.10	ENST00000446558.5	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5383.3358513926	1807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCTTTACTCCTATAC	11	False	NA	8	True	AATATA	-21	NA	216498854	216579180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216578920
transcript_84542.known	chr2	+	2225	2	FSM	ENSG00000197756.10	ENST00000487233.1	2225	2	0	0	0	0	multi-exon	FALSE	canonical	3	9016	junction_1	0	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAATTGCCTTGGCTTG	0	True	NA	10	True	AATAAA	-16	NA	216498843	216501460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269
transcript_84543.known	chr2	+	385	5	FSM	ENSG00000197756.10	ENST00000420712.1	385	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5673.46490250887	17714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATTGCCTTGGCTTGTT	18	False	NA	12	True	AATAAA	-18	NA	216498861	216501462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499831_216499867_216499948_216500032_216501340
transcript_84544.known	chr2	+	425	4	FSM	ENSG00000197756.10	ENST00000600880.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	5368.00033118065	3992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGATCATGCCTCAT	6	True	NA	NA	False	NA	NA	NA	216498849	216529454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216529269
transcript_84545.known	chr2	+	2082	2	FSM	ENSG00000197756.10	ENST00000478153.1	2082	2	0	0	0	0	multi-exon	FALSE	canonical	3	12844	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAAATTGCCTTGG	11	False	NA	6	True	AATAAA	-12	NA	216498824	216501456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216499399_216499948
transcript_84546.nnic	chr2	+	783	4	Fusion	ENSG00000197756.10_ENSG00000225794.3	novel	2992	4	NA	NA	130	0	multi-exon	TRUE	canonical	0	0	junction_2	6054.71966504001	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGCACCATACTCTAG	163	False	NA	NA	False	AATAAA	-16	NA	216499269	216611202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_216499399_216499948_216500032_216533920_216534033_216610743
transcript_84550.nnic	chr2	+	1186	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	130	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	2536.8375763712	2192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	NA	False	NA	16	True	ATTAAA	-16	NA	216632957	216664436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_216633276_216660556_216660787_216661857_216661999_216663939
transcript_84551.known	chr2	+	1414	4	FSM	ENSG00000115457.10	ENST00000233809.9	1414	4	0	0	0	0	multi-exon	FALSE	canonical	3	5164	junction_1	188.639574026472	2242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	-2	True	NA	16	True	ATTAAA	-16	NA	216633419	216664436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216633966_216660556_216660787_216661857_216661999_216663939
transcript_84558.known	chr2	-	6239	4	FSM	ENSG00000115461.5	ENST00000233813.5	6239	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.88561808316413	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCGTCGGCTTCCTCCG	-2	True	NA	-1	True	AATAAA	-17	NA	216695549	216672104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_216676883_216678111_216678232_216678849_216679080_216694438
transcript_84561.nnic	chr2	+	370	2	NNC	ENSG00000223923.2	novel	568	4	NA	NA	-27	-8410	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATCCTGTTGGTTCTGTT	NA	False	NA	6	True	AATAAA	-17	NA	217978679	217984205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_217978845_217984000
transcript_84568.known	chr2	-	2503	2	FSM	ENSG00000229754.1	ENST00000439871.1	2503	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGTGTGTTTATTTTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	218065729	218059154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218061437_218065508
transcript_84588.known	chr2	+	1410	11	FSM	ENSG00000163466.16	ENST00000315717.10	1410	11	0	0	0	0	multi-exon	TRUE	canonical	3	2728	junction_1	276.943116903093	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAATTTGCTGGGTTT	19	True	NA	30	True	AATAAA	-19	NA	218217188	218254348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_84589.known	chr2	+	1605	10	FSM	ENSG00000163466.16	ENST00000295685.14	1605	10	0	0	0	0	multi-exon	FALSE	canonical	3	2964	junction_9	229.324989081617	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	40	False	NA	38	True	AATAAA	-27	NA	218217209	218254356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_84590.known	chr2	+	816	5	FSM	ENSG00000163466.16	ENST00000465395.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	2971	junction_2	119.470707706952	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGCCTCTCTTAGG	116	False	NA	NA	False	AATAAA	-20	NA	218217454	218239195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663
transcript_84591.known	chr2	+	2003	2	FSM	ENSG00000179921.15	ENST00000522678.5	2003	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTATCTCATTCCATA	1	True	NA	NA	False	AATAAA	-16	NA	218261014	218263859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218261217_218262058
transcript_84592.known	chr2	+	1384	2	FSM	ENSG00000179921.15	ENST00000519574.2	1384	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATCTCATTCCATATC	1	True	NA	NA	False	AATAAA	-18	NA	218261014	218263861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218261217_218262679
transcript_84596.known	chr2	-	1761	10	FSM	ENSG00000127837.10	ENST00000420660.5	1761	10	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_1	37.415913957619	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	9594	False	NA	-39	True	NA	NA	NA	218269740	218264161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381
transcript_84597.known	chr2	-	1804	11	FSM	ENSG00000127837.10	ENST00000444053.5	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	336.908429695667	4863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	9156	False	NA	-6	True	AATAAA	-15	NA	218270178	218264128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269538_218269965
transcript_84598.known	chr2	-	1833	10	FSM	ENSG00000127837.10	ENST00000489767.5	1833	10	0	0	0	0	multi-exon	FALSE	canonical	3	1154	junction_9	47.1451658886324	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAGATACTAGTTAAAG	21	True	NA	-60	True	NA	NA	NA	218270116	218264182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269535_218269965
transcript_84601.known	chr2	-	1251	11	FSM	ENSG00000135926.15	ENST00000445635.5	1251	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	65.6950530862104	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACATAGGCCATTATCCT	-4	True	NA	NA	False	NA	NA	NA	218292513	218275005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218292465
transcript_84602.known	chr2	+	2991	9	FSM	ENSG00000127838.15	ENST00000258362.7	2991	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	7.68012857965282	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCACCCAACAGCT	9	True	NA	24	True	AATAAA	-28	NA	218323172	218346791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218323432_218339782_218339899_218340028_218340142_218340727_218340787_218341533_218341627_218341980_218342145_218343499_218343587_218344454_218344571_218344807
transcript_84609.known	chr2	-	480	3	FSM	ENSG00000225062.1	ENST00000441749.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTGTGGTGTTTTGT	-9	True	NA	-3	True	AATATA	-16	NA	218367835	218366664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218366799_218366926_218367028_218367590
transcript_84612.known	chr2	+	758	3	FSM	ENSG00000127838.15	ENST00000248451.7	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_1	121	9436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	3942	False	NA	22	True	AATAAA	-27	NA	218270391	218272947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218270603_218271380_218271550_218272569
transcript_84613.known	chr2	+	1372	2	FSM	ENSG00000127838.15	ENST00000469689.1	1372	2	0	0	0	0	multi-exon	FALSE	canonical	3	1257	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATAAAGTTATTGAGT	-4	True	NA	-14	True	NA	NA	NA	218270519	218272911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218271550_218272569
transcript_84614.known	chr2	-	2292	12	FSM	ENSG00000135926.15	ENST00000258412.8	2292	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	63.5635947576315	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTATGGCTCCAGGAGT	6	True	NA	-5	True	AATAAA	-22	NA	218292503	218274196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
transcript_84615.known	chr2	-	2422	12	FSM	ENSG00000135926.15	ENST00000396809.6	2422	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_11	58.4341120797215	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCTGTATGGCTCCAG	6608	False	NA	-9	True	AATAAA	-18	NA	218285934	218274200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218285762
transcript_84618.known	chr2	+	786	7	FSM	ENSG00000144579.8	ENST00000491064.5	786	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	15.4668103441602	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTAGTGAGGGTGATGGG	21	False	NA	NA	False	NA	NA	NA	218398255	218404418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218398333_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_84619.known	chr2	+	2525	7	FSM	ENSG00000144579.8	ENST00000273062.7	2525	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	14.5028732785381	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	-6	True	NA	29	True	ACTAAA	-19	NA	218399867	218405941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218400158_218401563_218401713_218402110_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_84620.known	chr2	+	998	6	FSM	ENSG00000144579.8	ENST00000497677.5	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.96794863550169	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATTTTAACAAAATGAAA	-10	True	NA	-24	True	NA	NA	NA	218400070	218403741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218400158_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231
transcript_84626.nnic	chr2	-	2325	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	-22	2581	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	16.0252925090308	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATTGTAAAATTTTAG	-38	True	NA	NA	False	AATAAA	-14	NA	218568373	218525689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_84629.nnic	chr2	-	1793	11	NNC	ENSG00000135913.11	novel	8022	26	NA	NA	-22	2049	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	16.0252925090308	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCAATCCCATTACTGG	-38	True	NA	NA	False	AATAAA	-16	NA	218568373	218526221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_218526727_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_84644.known	chr2	-	8022	26	FSM	ENSG00000135913.11	ENST00000258399.8	8022	26	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_14	13.1054797699283	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGACTGTTATTTC	-16	True	NA	-4	True	ATTAAA	-17	NA	218568351	218450250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558678_218560819_218560884_218562672_218562814_218568177
transcript_84645.known	chr2	-	5019	26	FSM	ENSG00000135913.11	ENST00000454775.5	5019	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_23	15.2656477098091	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAAAAC	10	True	NA	NA	False	ATTAAA	-8	NA	218568325	218453267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558718_218560819_218560884_218562672_218562814_218568177
transcript_84646.known	chr2	+	6500	20	FSM	ENSG00000127831.11	ENST00000248444.10	6500	20	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	10.1528484874922	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTCAGACTGCAGT	1	True	NA	NA	False	NA	NA	NA	218419122	218453295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218419169_218423767_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724_218430879_218431856_218431958_218432045_218432184_218432792_218432952_218434525_218434706_218435288_218435435_218436481_218436627_218437123_218437313_218438657_218438727_218440721_218440863_218449222
transcript_84652.nic	chr2	+	1692	10	ISM	ENSG00000127831.11	ENST00000248444.10	6500	20	-45	21929	-43	150	5prime_fragment	FALSE	canonical	3	45	junction_3	4.69041575982343	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGGGAGCTGTCAG	NA	False	NA	NA	False	NA	NA	NA	218419077	218431366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_218419169_218423767_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724
transcript_84656.known	chr2	+	1126	8	FSM	ENSG00000144580.14	ENST00000295701.9	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	113.677129608019	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAACTATTGAACC	-1	True	NA	3	True	AATAAA	-18	NA	218568874	218593842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218593527
transcript_84657.known	chr2	+	3820	8	FSM	ENSG00000144580.14	ENST00000273064.11	3820	8	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	38.1142214606441	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATAGGAAACCTTAG	9	True	NA	NA	False	NA	NA	NA	218568838	218597080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107
transcript_84664.known	chr2	+	3259	9	FSM	ENSG00000144580.14	ENST00000542068.5	3259	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	134.181546793887	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATTTTTCCTTTAC	87	False	NA	0	True	AATAAA	-19	NA	218568707	218596424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107_218596299_218596334
transcript_84670.known	chr2	+	1525	9	FSM	ENSG00000074582.15	ENST00000392110.6	1525	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	63.4187472282447	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	5	True	NA	14	True	AATAAA	-14	NA	218659713	218663442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659744_218660036_218660167_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_84671.known	chr2	+	1636	9	FSM	ENSG00000074582.15	ENST00000392111.7	1636	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	64.4882498987219	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	-26	True	NA	15	True	AATAAA	-15	NA	218659682	218663443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659744_218660036_218660246_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_84675.known	chr2	+	1483	9	FSM	ENSG00000074582.15	ENST00000439945.5	1483	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	60.3629646389241	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	5	False	NA	-24	True	NA	NA	NA	218659759	218663404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659801_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_84677.nic	chr2	+	1511	9	NIC	ENSG00000074582.15	novel	1636	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	63.0728745182903	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	5	True	NA	15	True	AATAAA	-15	NA	218659713	218663443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_218659744_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_84685.known	chr2	+	1427	8	FSM	ENSG00000074582.15	ENST00000359273.8	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	50.2986996220923	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	-26	True	NA	15	True	AATAAA	-15	NA	218659682	218663443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659744_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_84692.known	chr2	+	1430	8	FSM	ENSG00000074582.15	ENST00000412366.5	1430	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	57.7680089421719	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	28	True	NA	15	True	AATAAA	-15	NA	218659736	218663443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659801_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_847.nic	chr1	-	1222	7	ISM	ENSG00000248333.9	ENST00000407249.7	2677	20	-356	6799	-356	-614	5prime_fragment	FALSE	canonical	3	78	junction_3	9.51606828241347	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	NA	False	NA	NA	False	NA	NA	NA	1659368	1642385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_84701.nnic	chr2	+	913	6	NIC	ENSG00000074582.15	novel	1427	8	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	66.7173140946186	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	-21	True	NA	15	True	AATAAA	-15	NA	218659687	218663443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_218659744_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_84705.known	chr2	+	2015	8	FSM	ENSG00000074582.15	ENST00000431802.5	2015	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	48.1778168955	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	17	False	NA	14	True	AATAAA	-14	NA	218659771	218663442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_84708.known	chr2	-	1477	10	FSM	ENSG00000163481.8	ENST00000295704.7	1477	10	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	24.7835070605881	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	-13	True	NA	-35	True	AATAAA	-15	NA	218672002	218663891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668238_218668342_218668604_218668680_218671929
transcript_84718.known	chr2	-	1807	8	FSM	ENSG00000163481.8	ENST00000473034.5	1807	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_3	19.3147928927492	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	12	True	NA	-35	True	AATAAA	-15	NA	218671977	218663891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668680_218671929
transcript_84720.known	chr2	+	4821	27	FSM	ENSG00000163482.12	ENST00000392105.7	4821	27	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_21	25.0481488999409	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAGATCCTGGTCTGGC	9	True	NA	4	True	NA	NA	NA	218672068	218702709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218672216_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696589_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_84723.known	chr2	+	558	2	FSM	ENSG00000163482.12	ENST00000468026.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAAATATTATTAGTCT	4	True	NA	NA	False	ATTAAA	-31	NA	218672320	218673253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218672366_218672740
transcript_84724.known	chr2	+	4721	27	FSM	ENSG00000163482.12	ENST00000440309.5	4721	27	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	24.2130887876589	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGAAGCTCCCAGGAC	-21	True	NA	21	True	AATAAA	-15	NA	218672295	218702623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218672366_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_84726.known	chr2	+	5007	20	FSM	ENSG00000135912.11	ENST00000392102.6	5007	20	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_8	26.9057038099159	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGACTGAGTGAACTGTA	-25	True	NA	7	True	AATAAA	-1	NA	218710834	218755416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218711038_218727268_218727348_218737578_218739164_218740057_218740168_218740520_218740585_218745108_218745234_218745690_218745802_218746154_218746232_218747002_218747195_218747289_218747373_218747596_218747726_218748104_218748228_218748835_218748935_218749252_218749388_218750008_218750147_218751703_218751807_218752762_218752974_218753114_218753186_218753583_218753670_218754133
transcript_84728.known	chr2	+	1895	9	FSM	ENSG00000135929.9	ENST00000258415.9	1895	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_4	14.1774468787578	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTGTCATTCTTTTTG	-1	True	NA	18	True	AATAAA	-23	NA	218782146	218815293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218782438_218809576_218809768_218812221_218812422_218812551_218812750_218812923_218813097_218814020_218814188_218814379_218814459_218814544_218814758_218814910
transcript_84729.known	chr2	+	2566	7	FSM	ENSG00000135929.9	ENST00000494263.5	2566	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_4	16.1288216832132	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGACCTTTGTCATTCT	-9	True	NA	13	True	AATAAA	-18	NA	218781748	218815288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218782438_218809576_218809768_218812221_218812422_218812551_218812750_218812923_218813097_218814020_218814758_218814910
transcript_84730.nnic	chr2	+	748	3	NNC	ENSG00000288898.1	novel	657	3	NA	NA	-2	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCAGAAATGGCTGTAGTG	4	True	NA	NA	False	ATTAAA	-23	NA	218909155	218939967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_218909450_218926055_218926204_218939661
transcript_84734.known	chr2	-	2259	4	FSM	ENSG00000181378.14	ENST00000295729.6	2259	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGGTAGGATTGATT	-10	True	NA	NA	False	AGTAAA	-24	NA	219041523	219033691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219035665_219038374_219038579_219040518_219040565_219041487
transcript_84735.nic	chr2	-	314	2	ISM	ENSG00000181378.14	ENST00000453220.5	5877	33	35784	0	16431	0	3prime_fragment	FALSE	canonical	3	23	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACCTTGACTTTATTTC	92	False	NA	-3	True	AGTAAA	-22	NA	219003273	219002846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_219003022_219003134
transcript_84737.known	chr2	-	8020	8	FSM	ENSG00000187736.13	ENST00000356853.10	8020	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_7	14.3270829592925	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTATTTTCATTTGT	-13	True	NA	-3	True	ATTAAA	-18	NA	219160815	219069356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_84744.nnic	chr2	-	1065	6	NNC	ENSG00000187736.13	novel	547	5	NA	NA	1	1134	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	54.1833922895199	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGTATAGATTATTTG	9170	False	NA	-4	True	AGTAAA	-20	NA	219160864	219145572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_219145905_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_84745.known	chr2	-	572	4	FSM	ENSG00000187736.13	ENST00000491159.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	58.8047617119566	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTTACATGGCAGCAAT	NA	False	NA	NA	False	NA	NA	NA	219125652	219076317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219076456_219077245_219077365_219078073_219078207_219125470
transcript_84746.known	chr2	-	1954	7	FSM	ENSG00000187736.13	ENST00000409720.5	1954	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.9628606688362	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTAACATTTATTGAGCA	2478	False	NA	-19	True	AATAAA	-30	NA	219158362	219075316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219076446_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185
transcript_84747.known	chr2	-	1154	9	FSM	ENSG00000115649.16	ENST00000453038.5	1154	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	116.600546739713	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGTCTTCTGGCCTCA	826	False	NA	NA	False	GGGGCT	-12	NA	219177313	219172893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177103
transcript_84748.known	chr2	-	2073	9	FSM	ENSG00000115649.16	ENST00000409789.5	2073	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	123.434129700825	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGACTGATGGGTTCAGG	33	True	NA	NA	False	NA	NA	NA	219178106	219172173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177697
transcript_84753.known	chr2	-	2019	8	FSM	ENSG00000115649.16	ENST00000360507.10	2019	8	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_7	22.8901547324056	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGACTTTTCCTTCT	15	True	NA	-5	True	AATAAA	-15	NA	219176925	219171896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759
transcript_84754.known	chr2	+	4556	9	FSM	ENSG00000144567.11	ENST00000430297.7	4556	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.0690262633915	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGTGATAATTCTAGTG	-3	True	NA	15	True	AATAAA	-20	NA	219178274	219185475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219178634_219178921_219179029_219179732_219179764_219180109_219180246_219180669_219180755_219181061_219181206_219181368_219181464_219181639_219181776_219182012
transcript_84757.known	chr2	+	944	10	FSM	ENSG00000158552.13	ENST00000409336.5	944	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	49.0532590377257	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGGAGGTCGCCCTG	17	True	NA	NA	False	NA	NA	NA	219206808	219209418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_84758.known	chr2	+	1070	9	FSM	ENSG00000158552.13	ENST00000621130.4	1070	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	65.8559033041078	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGTGTTTCTCTCTCCT	-8	True	NA	NA	False	AATAAA	-29	NA	219206783	219209651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_84759.known	chr2	+	1322	9	FSM	ENSG00000158552.13	ENST00000289528.10	1322	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_8	18.8348082018374	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGTGTTTCTCTCT	-10	True	NA	NA	False	AATAAA	-26	NA	219206781	219209648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_84769.known	chr2	-	2878	18	FSM	ENSG00000115657.14	ENST00000295750.5	2878	18	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_17	61.3292774848735	808	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	NA	False	NA	-8	True	AATAAA	-14	NA	219218994	219209771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219218124
transcript_84772.known	chr2	-	4025	16	FSM	ENSG00000198925.12	ENST00000409618.5	4025	16	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_15	100.684236877257	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-28	True	NA	-5	True	AATAAA	-16	NA	219229368	219219381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009
transcript_84773.known	chr2	-	3770	16	FSM	ENSG00000198925.12	ENST00000361242.9	3770	16	0	0	0	0	multi-exon	FALSE	canonical	2	187	junction_15	76.6331520948995	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-28	True	NA	-3	True	AATAAA	-18	NA	219229636	219219379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
transcript_84775.known	chr2	-	3799	15	FSM	ENSG00000198925.12	ENST00000396761.6	3799	15	0	0	0	0	multi-exon	FALSE	canonical	2	102	junction_14	95.5612048770369	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	9037	False	NA	-3	True	AATAAA	-18	NA	219229717	219219379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229534
transcript_84783.known	chr2	-	2574	17	FSM	ENSG00000163521.16	ENST00000392089.6	2574	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_16	4.11884009764885	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGTAACCCTTG	9258	False	NA	NA	False	NA	NA	NA	219245478	219236770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219239919_219240095_219240190_219240286_219242513_219242575_219242767_219242919_219243147_219243315_219243501_219243632_219245228
transcript_84789.known	chr2	+	2540	14	FSM	ENSG00000163516.14	ENST00000323348.10	2540	14	0	0	0	0	multi-exon	FALSE	canonical	1	67	junction_5	65.1009230158436	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTTTAGTTCCTTA	-29	True	NA	66	True	AATAAA	-42	NA	219229805	219236679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_84792.known	chr2	+	2940	13	FSM	ENSG00000163516.14	ENST00000477479.5	2940	13	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	88.5219683970532	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATTTTAATCACAATAAA	-8	True	NA	5	True	NA	NA	NA	219229826	219236618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_8480.known	chr1	+	2119	1	FSM	ENSG00000282048.1	ENST00000632517.1	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2835	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGGACTCACCTGGAA	15	False	NA	27	True	AATAAA	-16	NA	114032392	114034511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_114032400_114034500
transcript_84800.known	chr2	+	3245	11	FSM	ENSG00000163516.14	ENST00000463792.5	3245	11	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_2	95.8121077943701	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTTGTACTTACATT	3	True	NA	38	True	AATAAA	-14	NA	219229837	219236651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219230227_219230351_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219235876_219236009_219236096_219236321
transcript_84802.known	chr2	+	2155	11	FSM	ENSG00000163516.14	ENST00000409849.5	2155	11	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_1	101.402416144784	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGGCACTGTGGCCTT	446	False	NA	56	True	AATAAA	-32	NA	219229786	219236669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_84809.known	chr2	+	2868	8	FSM	ENSG00000115661.14	ENST00000409638.7	2868	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.73946317089104	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	NA	False	NA	3	True	AATAAA	-15	NA	219245454	219250337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245523_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_8481.known	chr1	+	2063	2	FSM	ENSG00000116774.12	ENST00000491700.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	22	True	NA	17	True	ATTAAA	-18	NA	113979490	113982254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113979631_113980331
transcript_84815.known	chr2	+	3118	8	FSM	ENSG00000115661.14	ENST00000396738.7	3118	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.49328441476351	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	-24	True	NA	3	True	AATAAA	-15	NA	219245478	219250337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245797_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_84827.known	chr2	+	895	6	FSM	ENSG00000115661.14	ENST00000409516.7	895	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	17.5886326927365	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGAGTGGGGGTGGG	-20	True	NA	NA	False	NA	NA	NA	219245482	219248746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245523_219245895_219246086_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_84838.known	chr2	-	673	4	FSM	ENSG00000127824.15	ENST00000456818.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	96.9409900689876	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTACAGCCGTGGTC	1591	False	NA	NA	False	AAGAAA	-35	NA	219253145	219251172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219252995
transcript_8484.known	chr1	-	1897	8	FSM	ENSG00000134207.17	ENST00000610096.1	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_7	86.9332373439644	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	18	False	NA	15	True	NA	NA	NA	114153850	114091764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
transcript_84840.known	chr2	-	2049	4	FSM	ENSG00000127824.15	ENST00000248437.9	2049	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	22.0655588845805	1808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTGATTTCTTTC	-1	True	NA	-2	True	ATTAAA	-17	NA	219253918	219249709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253855
transcript_84842.known	chr2	-	790	3	FSM	ENSG00000127824.15	ENST00000498660.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	102	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAAGGATGTCAACGCT	835	False	NA	NA	False	NA	NA	NA	219253901	219250728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251324_219251564_219251714_219253855
transcript_84843.known	chr2	-	804	3	FSM	ENSG00000127824.15	ENST00000462806.5	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	27	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	1	True	NA	NA	False	AAGAAA	-14	NA	219253916	219251193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251714_219252007_219252231_219253855
transcript_84845.known	chr2	+	2486	14	FSM	ENSG00000163516.14	ENST00000410034.7	2486	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.3522346154202	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTACTTGTACTTACA	53	False	NA	36	True	AATAAA	-12	NA	219229887	219236649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229959_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_84846.known	chr2	+	993	5	FSM	ENSG00000163516.14	ENST00000486203.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	17.2699160391705	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATGCAACAGATATGT	12	True	NA	NA	False	ATTAAA	-44	NA	219229846	219233034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489
transcript_84847.known	chr2	-	2042	14	FSM	ENSG00000163521.16	ENST00000409640.5	2042	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	4.93628037142598	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTAACCCTTGGACCT	-9	True	NA	NA	False	NA	NA	NA	219243614	219236765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219237348_219237511_219237728_219237825_219237958_219238249_219238364_219238494_219238585_219238704_219238780_219239091_219239211_219239410_219239452_219239560_219239683_219239774_219239834_219242513_219242575_219242767_219242919_219243147_219243315_219243501
transcript_84848.known	chr2	+	579	2	FSM	ENSG00000115661.14	ENST00000491697.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGTCAAGTGCAGAG	-30	True	NA	62	True	NA	NA	NA	219245472	219246424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245523_219245895
transcript_84849.known	chr2	+	444	3	FSM	ENSG00000115661.14	ENST00000486813.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAAAGAGTCTCCAGGTT	393	False	NA	NA	False	NA	NA	NA	219245895	219247534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219246086_219247112_219247247_219247414
transcript_84850.known	chr2	+	2094	6	FSM	ENSG00000115661.14	ENST00000496443.5	2094	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	16.8	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTAGTCTCAGTGTTC	4	True	NA	18	True	AATAAA	-19	NA	219245506	219248904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245797_219245895_219246877_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_84851.known	chr2	+	1930	6	FSM	ENSG00000115661.14	ENST00000478018.5	1930	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.863841300535	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGGTGTAGATCTTAGTC	392	False	NA	9	True	AATAAA	-10	NA	219245894	219248895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_84854.known	chr2	+	1946	10	FSM	ENSG00000135924.17	ENST00000392086.8	1946	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	4.90149888891395	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	-25	True	NA	17	True	AATAAA	-18	NA	219279343	219286898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_84857.nic	chr2	+	2054	9	NIC	ENSG00000135924.17	novel	1946	10	NA	NA	-1	0	intron_retention	FALSE	canonical	3	20	junction_6	4.91012983535059	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	61	False	NA	17	True	AATAAA	-18	NA	219279514	219286898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_84858.nnic	chr2	+	1111	5	NNC	ENSG00000230432.1	novel	311	3	NA	NA	-80	0	intron_retention	FALSE	canonical	2	3	junction_1	0.866025403784439	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	NA	False	NA	8	True	AATAAA	-19	NA	219298921	219304130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_219299129_219299625_219300171_219300374_219300425_219303676_219303852_219303996
transcript_84862.known	chr2	+	311	3	FSM	ENSG00000230432.1	ENST00000417355.1	311	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	NA	False	NA	8	True	AATAAA	-19	NA	219299001	219304130	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219299129_219300374_219300425_219303996
transcript_84868.known	chr2	-	1657	15	FSM	ENSG00000123992.20	ENST00000373963.5	1657	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	156.242697788552	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-17	True	NA	-5	True	ATTAAA	-16	NA	219387929	219374195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387758
transcript_84870.known	chr2	-	3825	15	FSM	ENSG00000123992.20	ENST00000273075.9	3825	15	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_9	43.2989725098433	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATCATTGTACATTTG	0	True	NA	-13	True	GATAAA	-5	NA	219387912	219372042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_84875.nic	chr2	-	1645	15	NIC	ENSG00000123992.20	novel	1662	15	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_14	171.193052500648	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCGTGCTACGCTTATT	510	False	NA	-3	True	ATTAAA	-18	NA	219387402	219374193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387277
transcript_84877.known	chr2	-	1875	15	FSM	ENSG00000123992.20	ENST00000373966.5	1875	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	170.694320410517	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-20	True	NA	-5	True	ATTAAA	-16	NA	219387932	219374195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387575
transcript_84889.known	chr2	-	1610	8	FSM	ENSG00000123992.20	ENST00000460963.5	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_2	46.517935974707	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAACAAAA	1	True	NA	NA	False	NA	NA	NA	219387792	219384585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_8489.known	chr1	-	4352	8	FSM	ENSG00000134207.17	ENST00000607941.5	4352	8	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_7	113.474981509456	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTCATTTTATGT	1428	False	NA	-3	True	ATTAAA	-18	NA	114152440	114089291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152217
transcript_84895.known	chr2	-	577	6	FSM	ENSG00000123992.20	ENST00000430206.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	323.443967326645	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGATGCATCTGTGAGA	566	False	NA	NA	False	NA	NA	NA	219387346	219385981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387277
transcript_84896.known	chr2	+	2243	9	FSM	ENSG00000175084.13	ENST00000373960.4	2243	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.75850956133924	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTGGCCCCTGTTGT	-1	True	NA	3	True	AATAAA	-16	NA	219418376	219426734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219419041_219420094_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
transcript_84899.known	chr2	+	1522	13	FSM	ENSG00000144591.20	ENST00000313597.10	1522	13	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	51.0170859179114	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	2	True	NA	17	True	AATAAA	-17	NA	219498890	219506989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84901.known	chr2	+	1501	13	FSM	ENSG00000144591.20	ENST00000373908.5	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	66.6583328124349	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	17	True	NA	16	True	AATAAA	-16	NA	219498905	219506988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84904.known	chr2	+	1797	13	FSM	ENSG00000144591.20	ENST00000622191.2	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	80.3817281614561	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	18	True	NA	-8	True	NA	NA	NA	219498906	219506964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84905.known	chr2	+	1537	13	FSM	ENSG00000144591.20	ENST00000683386.1	1537	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	109.780431113908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	217	False	NA	-8	True	NA	NA	NA	219499105	219506964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501911_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84906.known	chr2	+	1823	13	FSM	ENSG00000144591.20	ENST00000358215.8	1823	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	70.590515179685	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	12	True	NA	17	True	AATAAA	-17	NA	219498900	219506989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84907.known	chr2	+	1335	13	FSM	ENSG00000144591.20	ENST00000341142.8	1335	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	85.1819947067584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGCTGCCAGAAGGCCC	26	True	NA	NA	False	NA	NA	NA	219498914	219506798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498972_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84908.known	chr2	+	1630	12	FSM	ENSG00000144591.20	ENST00000373917.7	1630	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	53.2821896653768	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGGTTTTCTCCC	-1	True	NA	-37	True	NA	NA	NA	219498887	219506935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84910.known	chr2	+	1814	12	FSM	ENSG00000144591.20	ENST00000683241.1	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_8	93.2026140874132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-24	True	NA	-8	True	NA	NA	NA	219498864	219506964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84911.known	chr2	+	1799	12	FSM	ENSG00000144591.20	ENST00000684274.1	1799	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.9407536219162	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	-24	True	NA	-8	True	NA	NA	NA	219498864	219506964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504219_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_84924.known	chr2	+	10782	41	FSM	ENSG00000072195.15	ENST00000312358.12	10782	41	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	23.6127084427009	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCTGTGTGTCTATTGGG	5	True	NA	13	True	AATAAA	-15	NA	219434842	219493629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219435366_219444652_219444743_219444824_219445162_219447973_219449272_219451135_219451280_219451624_219451808_219461881_219462058_219462297_219462387_219464432_219464609_219467173_219467435_219468577_219468737_219468858_219469049_219469155_219469380_219471867_219471988_219472226_219472332_219472889_219473097_219473503_219473628_219473727_219473904_219476869_219476983_219477276_219477446_219477688_219477786_219477904_219478106_219479143_219479202_219479782_219479861_219479961_219480141_219480670_219480698_219481303_219481457_219481637_219481681_219482783_219482853_219483097_219485073_219485345_219485478_219488193_219488311_219488497_219488666_219488777_219488901_219489053_219489222_219489335_219489940_219490408_219490649_219490732_219490957_219491793_219491870_219492110_219492261_219492593
transcript_84927.known	chr2	+	1457	5	FSM	ENSG00000072195.15	ENST00000396688.5	1457	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	35.7980446393375	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCCAGTTTGTACCT	31	False	NA	-9	True	NA	NA	NA	219460765	219466841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219460997_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_84932.known	chr2	+	546	5	FSM	ENSG00000072195.15	ENST00000403148.6	546	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.0366555732381	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCTCCCTGGACACACC	109	False	NA	NA	False	NA	NA	NA	219442015	219444844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219442084_219443107_219443441_219444024_219444060_219444652_219444743_219444824
transcript_84933.known	chr2	+	408	2	FSM	ENSG00000286095.3	ENST00000475104.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTCTGTCCTGCTCTTCC	1560	False	NA	NA	False	AATAAA	-18	NA	219497690	219498287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219497862_219498050
transcript_84934.known	chr2	+	1274	5	FSM	ENSG00000072195.15	ENST00000396689.2	1274	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.9629753839185	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGTTGTGTTTTTT	440	False	NA	12	True	AATAAA	-17	NA	219461384	219466862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219461412_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_84935.known	chr2	+	2213	5	FSM	ENSG00000188760.11	ENST00000373883.4	2213	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	6.60965203320114	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCTTTGGTGGCTGG	-7	True	NA	34	True	TATAAA	-31	NA	219544027	219550595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219544378_219544688_219544894_219547505_219548082_219549151_219549355_219549716
transcript_84938.nnic	chr2	-	1252	5	NIC	ENSG00000124006.15	novel	2274	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	145.99208026465	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	4	True	NA	-17	True	AATAAA	-17	NA	219571539	219561721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219571393
transcript_8494.known	chr1	-	8369	20	FSM	ENSG00000197323.12	ENST00000358465.7	8369	20	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_12	27.2054866553628	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAAATGAATTTCTTT	-7	True	NA	-31	True	ATTAAA	-17	NA	114511203	114392789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114397861_114397939_114397991_114399456_114399610_114401388_114401464_114402759_114402884_114405409_114405760_114406940_114407101_114408676_114408741_114410183_114410317_114421435_114421637_114424590_114424756_114425448_114425724_114427176_114427295_114427747_114427895_114430797_114430913_114433616_114433734_114463103_114463237_114463411_114463557_114464269_114464389_114510550
transcript_84940.nic	chr2	-	674	4	ISM	ENSG00000124006.15	ENST00000373876.5	5503	20	18522	-28	-5	0	3prime_fragment	FALSE	canonical	3	35	junction_3	27.5358352374178	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	-9	True	NA	-3	True	AATAAA	-15	NA	219552719	219550727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_219550843_219551528_219551799_219552111_219552217_219552535
transcript_84942.known	chr2	-	694	4	FSM	ENSG00000124006.15	ENST00000489804.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	38.6637929966641	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-4	True	NA	-4	True	AATAAA	-14	NA	219552714	219550728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219550869_219551528_219551799_219552111_219552217_219552535
transcript_84945.nic	chr2	-	1215	4	ISM	ENSG00000124006.15	ENST00000373873.8	3297	9	5666	0	-244	0	3prime_fragment	FALSE	canonical	3	245	junction_1	56.482052213267	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGACACCTGGTGATAAG	6449	False	NA	-17	True	AATAAA	-17	NA	219565623	219561721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241
transcript_84951.known	chr2	-	662	3	FSM	ENSG00000124006.15	ENST00000462534.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	4	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	5	True	NA	-4	True	AATAAA	-14	NA	219552389	219550728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219550843_219551528_219551799_219552111
transcript_84952.nic	chr2	-	740	3	ISM	ENSG00000124006.15	ENST00000489804.5	694	4	273	0	-52	0	3prime_fragment	FALSE	canonical	2	4	junction_1	46.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	310	False	NA	-4	True	AATAAA	-14	NA	219552441	219550728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_219550869_219551528_219551799_219552111
transcript_84953.known	chr2	-	5380	16	FSM	ENSG00000124006.15	ENST00000465149.1	5380	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	134.190147013689	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	1333	False	NA	-4	True	AATAAA	-14	NA	219570739	219550728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219551799_219552111_219552217_219552535_219553025_219556019_219556293_219556577_219556724_219557342_219557619_219557822_219558111_219559224_219559498_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_84956.known	chr2	+	1351	2	FSM	ENSG00000123999.5	ENST00000243786.3	1351	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTTCTCCAGCTTCTC	-10	True	NA	12	True	AATAAA	-23	NA	219572309	219575711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219572643_219574693
transcript_84958.known	chr2	+	3618	25	FSM	ENSG00000144589.22	ENST00000456909.6	3618	25	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	16.3271672034339	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGTGTGGTACTTAGA	-4	True	NA	22	True	AATAAA	-18	NA	219597856	219616451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219597924_219598093_219598181_219601234_219601441_219601640_219601716_219601987_219602084_219602467_219602576_219602704_219602777_219605607_219605735_219605955_219606060_219606194_219606291_219606475_219606518_219606711_219606859_219607052_219607138_219608046_219608431_219608582_219608789_219609096_219609214_219609362_219609541_219611603_219611835_219611954_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614547_219615093_219615342_219616043
transcript_84964.known	chr2	-	6362	18	FSM	ENSG00000116106.12	ENST00000281821.7	6362	18	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	3.86448651897808	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTGTCTCTTTCAATA	-15	True	NA	2	True	AATAAA	-26	NA	221572304	221418026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_221420553_221425208_221426143_221426463_221426620_221429957_221430152_221434141_221434292_221436398_221436609_221437060_221437123_221442828_221443015_221443492_221443607_221446122_221446182_221455546_221455659_221456612_221456773_221457865_221457991_221482351_221482691_221501016_221501173_221563730_221564395_221568717_221568786_221572157
transcript_84966.known	chr2	-	558	3	FSM	ENSG00000116106.12	ENST00000541600.5	558	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGAGAGCTTCACCCAA	NA	False	NA	NA	False	NA	NA	NA	221572358	221564105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_221564395_221568717_221568786_221572157
transcript_84967.known	chr2	+	1156	2	FSM	ENSG00000237732.10	ENST00000555502.5	1156	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTAGTTTTTAATTTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	222318470	222321722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_222319371_222321466
transcript_84970.known	chr2	-	6761	17	FSM	ENSG00000116120.11	ENST00000281828.8	6761	17	0	0	0	0	multi-exon	FALSE	canonical	3	709	junction_12	89.4733724356023	3618	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTATAGTCTTTTGT	-9	True	NA	NA	False	AATAAA	-19	NA	222656092	222566898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_222572023_222599927_222600084_222613810_222613929_222619644_222619738_222623649_222623731_222624271_222624480_222624713_222624776_222628836_222628889_222630112_222630175_222631603_222631675_222633198_222633308_222634390_222634542_222639579_222639696_222640861_222640932_222642850_222643006_222648739_222648796_222656015
transcript_84971.known	chr2	+	378	1	FSM	ENSG00000235225.1	ENST00000431088.1	378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGATCATCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	222726456	222726834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_222726500_222726800
transcript_84972.known	chr2	+	5468	16	FSM	ENSG00000123983.15	ENST00000679545.1	5468	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	125.819376709454	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	1	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918069_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_84974.known	chr2	+	5433	15	FSM	ENSG00000123983.15	ENST00000680251.1	5433	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	120.939013134551	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	1	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_222861259_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_84978.nnic	chr2	-	1203	3	Antisense	novelGene_ENSG00000226539.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATCTTGCATATTGA	NA	False	NA	-19	True	AATAAA	-16	NA	223724074	223704491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_223705356_223720872_223720995_223723857
transcript_84981.known	chr2	-	3429	17	FSM	ENSG00000286239.1	ENST00000650969.1	3429	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	303.108472487573	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTGAACCTGGGAGGCAG	6	True	NA	NA	False	NA	NA	NA	223945299	223757257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223855777_223855917_223878528_223878731_223880123_223880233_223881941_223882073_223884647_223884750_223894233_223894340_223895503_223895631_223898957_223899052_223901182_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_84984.known	chr2	-	3986	5	FSM	ENSG00000152056.17	ENST00000396654.7	3986	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	2.34520787991171	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGTTTTCATGAAT	-1	True	NA	2	True	AATAAA	-27	NA	223837582	223755325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223837447
transcript_84985.known	chr2	-	2201	4	FSM	ENSG00000152056.17	ENST00000334271.7	2201	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7973274814304	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAGTAAAAGCTTGTA	11	True	NA	NA	False	AAGAAA	-14	NA	223837570	223756989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223758751_223765212_223765351_223777690_223777870_223837447
transcript_84986.known	chr2	-	4607	12	FSM	ENSG00000085449.15	ENST00000233055.9	4607	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	61.2017392936016	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGCCTAATATCAC	-2	True	NA	-12	True	AATAAA	-18	NA	223945335	223875347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223878731_223880123_223880233_223881941_223882073_223884647_223884750_223894233_223894340_223895503_223895631_223898957_223899071_223901182_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_8499.known	chr1	-	1275	7	FSM	ENSG00000116752.6	ENST00000369541.4	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_3	71.8625230716416	2826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGAGGCGGTTACTGT	0	True	NA	-13	True	AATAAA	-23	NA	114581615	114567556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114576687_114576759_114581298_114581392_114581498
transcript_84991.known	chr2	-	864	5	FSM	ENSG00000085449.15	ENST00000483061.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	60.1638388070442	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGCAAACCCTTCCTC	-2	True	NA	NA	False	NA	NA	NA	223945335	223900854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_85000.known	chr2	+	1689	4	FSM	ENSG00000135900.4	ENST00000258383.4	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_2	21.5148527508066	803	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCATTTTAATTTGATA	10	True	NA	23	True	AATAAA	-23	NA	223957462	223967714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_223957652_223959533_223960003_223963755_223963935_223966862
transcript_85003.known	chr2	-	2226	9	FSM	ENSG00000135919.14	ENST00000409304.6	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_3	79.6884558766199	634	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGAGACTTTTCCTATT	-1	True	NA	-6	True	AATAAA	-34	NA	224039286	223975044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223975905_223977543_223977628_223980310_223980398_223982680_223982782_223984751_223984951_223991802_223992001_223998114_223998343_224001641_224001923_224039098
transcript_85007.nnic	chr2	-	1709	2	NNC	ENSG00000124019.10	novel	2582	2	NA	NA	-31583	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	52	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATAAGACATTGTG	NA	False	NA	NA	False	AATAAA	-18	NA	224433690	224378697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_224380209_224433492
transcript_85010.known	chr2	-	9771	2	FSM	ENSG00000169047.6	ENST00000305123.6	9771	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTAAGAGCAGTGTATG	-3	True	NA	-8	True	ATTAAA	-19	NA	226799820	226731311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_226736251_226794988
transcript_85013.known	chr2	+	3296	4	FSM	ENSG00000272622.2	ENST00000668519.1	3296	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGCTGTCCTCTTC	809	False	NA	NA	False	NA	NA	NA	226800145	226813741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_226800223_226807485_226807626_226808388_226808638_226810911
transcript_85014.known	chr2	+	5061	9	FSM	ENSG00000144468.17	ENST00000392062.7	5061	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	51.3681564785033	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	-18	True	NA	NA	False	AATAAA	-23	NA	226836053	226999210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_226836088_226838072_226838155_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_85017.known	chr2	+	4883	7	FSM	ENSG00000144468.17	ENST00000341329.7	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	30.7878042232454	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATTTATACTGTCACCA	NA	False	NA	NA	False	AATAAA	-28	NA	226835935	226999215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_226836088_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_85022.known	chr2	-	2199	8	FSM	ENSG00000236432.8	ENST00000658093.1	2199	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	5.16661180572146	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACAAATTACTCAGTCTC	7268	False	NA	-10	True	AATAAA	-10	NA	227325216	227258484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_227259284_227264668_227265439_227265874_227265936_227268627_227268770_227279482_227279579_227281703_227281790_227305459_227305656_227325167
transcript_85026.known	chr2	+	1247	9	FSM	ENSG00000168958.20	ENST00000409616.5	1247	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	242.419058656699	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGAAATATAAAAGATT	-5	True	NA	-3	True	NA	NA	NA	227325261	227357151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_85029.known	chr2	+	1921	9	FSM	ENSG00000168958.20	ENST00000304593.14	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	226.539973018008	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-16	True	NA	23	True	AATAAA	-16	NA	227325250	227357833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227347225_227347385_227352513_227352574_227355676_227355762_227356985
transcript_85035.known	chr2	+	1760	8	FSM	ENSG00000168958.20	ENST00000337110.11	1760	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	218.840730455102	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	1	True	NA	23	True	AATAAA	-16	NA	227325267	227357833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227355676_227355762_227356985
transcript_85039.known	chr2	+	1716	8	FSM	ENSG00000168958.20	ENST00000349901.11	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	194.821425297892	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACTGTCAACCAAAGA	9	True	NA	2	True	TTTAAA	-35	NA	227325275	227357812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_8504.known	chr1	-	4326	7	FSM	ENSG00000213281.5	ENST00000369535.5	4326	7	0	0	0	0	multi-exon	FALSE	canonical	3	1175	junction_3	61.4882554278096	661	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATATTCACTGAAGTG	-20	True	NA	-11	True	AATAAA	-28	NA	114716771	114704468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114708051_114708153_114708193_114708530_114708655_114709568_114709729_114713799_114713979_114716049_114716178_114716657
transcript_85047.known	chr2	+	1085	7	FSM	ENSG00000168958.20	ENST00000354503.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	73.6223471508482	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCACACCCTGAAAATGT	-17	True	NA	61	True	NA	NA	NA	227325249	227357215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_85060.known	chr2	+	1548	6	FSM	ENSG00000168958.20	ENST00000409565.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	204.963021055019	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTGTATTTAATAAAC	-8	True	NA	-11	True	TTTAAA	-22	NA	227325258	227357799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_85062.known	chr2	+	647	5	FSM	ENSG00000168958.20	ENST00000524634.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	218.222936466358	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAAATACTGTCTCAAC	4	True	NA	-23	True	NA	NA	NA	227325270	227357131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_85069.known	chr2	+	3524	6	FSM	ENSG00000168958.20	ENST00000460756.5	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	73.5581402701292	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	-2	True	NA	23	True	AATAAA	-16	NA	227325264	227357833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_85071.known	chr2	-	5213	6	FSM	ENSG00000135917.16	ENST00000644224.2	5213	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	5.46260011349906	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCCTACTGTGGAGTA	-13	True	NA	-1	True	AATAAA	-24	NA	227718028	227683762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227702168_227702321_227717942
transcript_85072.known	chr2	+	1683	13	FSM	ENSG00000123977.10	ENST00000309931.3	1683	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	2.17306746840088	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTACATGTGTATTT	-20	True	NA	5	True	AATAAA	-15	NA	227871630	227924344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227871730_227885350_227885424_227889855_227890001_227891254_227891314_227893794_227893918_227898181_227898282_227903001_227903110_227904928_227905036_227906235_227906339_227907137_227907253_227918779_227918857_227921398_227921562_227923933
transcript_85073.nnic	chr2	-	518	3	NNC	ENSG00000153820.13	novel	6954	12	NA	NA	-57	-171150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGGTAAATGCCTTCT	-4	True	NA	NA	False	AATAAA	-18	NA	228181744	228162057	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_228162279_228172393_228172513_228181566
transcript_85074.nic	chr2	-	817	3	NIC	ENSG00000232023.3	novel	718	4	NA	NA	-151	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTCACCACTCCTATT	NA	False	NA	NA	False	AATAAA	-21	NA	228568717	228483256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_228483499_228488682_228488794_228568253
transcript_85075.known	chr2	-	2557	3	FSM	ENSG00000153823.19	ENST00000392055.8	2557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGTCTGTCCTTTTTC	-27	True	NA	1	True	AATAAA	-37	NA	229271287	229023972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_229026109_229155817_229155965_229271013
transcript_85076.known	chr2	-	3257	13	FSM	ENSG00000187957.8	ENST00000341772.5	3257	13	0	0	0	0	multi-exon	FALSE	canonical	2	53	junction_3	9.3407708461347	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTGTCTCTTTTGTTC	-28	True	NA	-3	True	AATAAA	-18	NA	229714555	229357628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_229358652_229366872_229367120_229388264_229388397_229407231_229407346_229418107_229418231_229447315_229447541_229477139_229477254_229512782_229512937_229546946_229547093_229585857_229586025_229588393_229588489_229591579_229591889_229714147
transcript_85091.nnic	chr2	+	1434	5	NNC	ENSG00000153832.12	novel	3120	5	NA	NA	-5	38635	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	70.1623118205209	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATTCATGTGTATATCT	-5	True	NA	NA	False	AATAAA	-20	NA	229922485	230051754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_229922610_229976240_229976350_229996750_229996924_230024880_230025003_230050848
transcript_85092.known	chr2	+	3120	5	FSM	ENSG00000153832.12	ENST00000373652.7	3120	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.2788110275682	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCATAATAATCTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	229922301	230013109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_229922610_229932770_229932887_229976240_229976350_229996750_229996924_230010695
transcript_85094.nnic	chr2	+	875	4	NNC	ENSG00000153832.12	novel	2813	4	NA	NA	8	-14291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.0757203447796	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATGGGAATCTGTTGC	NA	False	NA	NA	False	ATTAAA	-22	NA	229922309	229997989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_229922610_229976240_229976350_229996750_229996924_229997696
transcript_85096.known	chr2	+	2813	4	FSM	ENSG00000153832.12	ENST00000283946.8	2813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.0757203447796	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGTGCCTTATTAC	-2	True	NA	NA	False	ATTAAA	-26	NA	229922502	230013119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_229922610_229976240_229976350_229996750_229996924_230010695
transcript_85099.known	chr2	-	1836	4	FSM	ENSG00000163053.11	ENST00000457406.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	1.4142135623731	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACATTTTCCTTTT	16	True	NA	NA	False	TATAAA	-27	NA	230068907	230045656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_230046723_230049760_230049905_230059093_230059367_230068554
transcript_85100.known	chr2	-	4315	5	FSM	ENSG00000163053.11	ENST00000295190.9	4315	5	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	4.9180788932265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCAGTGAGTTTTTGT	-1	True	NA	-10	True	AATAAA	-17	NA	230068924	230034981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_230037532_230045744_230046723_230049760_230049905_230059093_230059367_230068554
transcript_85102.known	chr2	+	910	5	FSM	ENSG00000079263.19	ENST00000544128.5	910	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.6583123951777	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACGGGAAAAGTAAAAGAA	4638	False	NA	NA	False	AATAAA	-20	NA	230230410	230239067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230230529_230234937_230235076_230237082_230237261_230238212_230238382_230238760
transcript_85103.known	chr2	+	629	4	FSM	ENSG00000079263.19	ENST00000538494.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCAGACTGTGGGAGG	4641	False	NA	NA	False	NA	NA	NA	230230413	230238927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230230529_230237082_230237261_230238212_230238382_230238760
transcript_85104.known	chr2	-	6120	18	FSM	ENSG00000135899.19	ENST00000358662.9	6120	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.2442091971818	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTAAACTTTGTTCCA	-9	True	NA	NA	False	AATATA	-30	NA	230219984	230165185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_230169238_230170620_230170762_230172065_230172175_230172843_230172960_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_85108.known	chr2	-	1952	15	FSM	ENSG00000135899.19	ENST00000258382.10	1952	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	2.12011743995083	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGTCCATGTGTTTTA	-9	True	NA	NA	False	AATAAA	-18	NA	230219984	230176474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_230176725_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_85112.nic	chr2	-	964	7	ISM	ENSG00000135899.19	ENST00000258382.10	1952	15	-24	33457	-19	2417	5prime_fragment	FALSE	canonical	3	11	junction_1	2.3392781412697	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGAAAAGCCTTTCTTC	5	True	NA	NA	False	AAGAAA	-1	NA	230220008	230209931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_85115.known	chr2	-	567	4	FSM	ENSG00000135899.19	ENST00000462232.1	567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.71722460186015	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATCCAAAATGAATGCG	-14	True	NA	NA	False	NA	NA	NA	230219989	230212415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_230212431_230212760_230213028_230214949_230215119_230219873
transcript_8512.known	chr1	-	2667	19	FSM	ENSG00000009307.17	ENST00000534699.5	2667	19	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_18	1107.431189513	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTTAAGGTGGCGCC	3	True	NA	6	True	AATAAA	-45	NA	114757982	114717956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114757924
transcript_85122.known	chr2	+	1727	6	FSM	ENSG00000185404.17	ENST00000458341.1	1727	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.85472369909914	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGAGTCACATGTAC	NA	False	NA	NA	False	NA	NA	NA	230342069	230372744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230342174_230357804_230357968_230358963_230359133_230361613_230361698_230370907_230370968_230371597
transcript_85136.known	chr2	+	1889	5	FSM	ENSG00000135916.16	ENST00000335005.10	1889	5	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	1324.88122109116	6555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTGAGTGTGGCT	-4	True	NA	15	True	AATAAA	-16	NA	230864947	230879247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230865146_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_85142.known	chr2	+	2037	6	FSM	ENSG00000135916.16	ENST00000326427.11	2037	6	0	0	0	0	multi-exon	TRUE	canonical	3	3330	junction_2	181.196688711466	8233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	-10	True	NA	16	True	AATAAA	-17	NA	230864941	230879248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_85143.known	chr2	+	1888	5	FSM	ENSG00000135916.16	ENST00000326407.10	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	1490.60161931349	6302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	28	True	NA	16	True	AATAAA	-17	NA	230864979	230879248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230877399_230877551_230878007
transcript_85144.nnic	chr2	-	716	2	NNC	ENSG00000135898.10	novel	1523	2	NA	NA	-118	26222	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTCCCTAGTTTTGATT	7	True	NA	NA	False	AATAAA	-21	NA	230961184	230881095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_230881402_230960774
transcript_85145.known	chr2	+	598	1	FSM	ENSG00000261829.1	ENST00000568958.1	598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGCTCGTGTGTTGTA	7350	False	NA	8	True	AATAAA	-18	NA	231052039	231052637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231052000_231052600
transcript_85146.known	chr2	+	3323	25	FSM	ENSG00000173692.14	ENST00000308696.11	3323	25	0	0	0	0	multi-exon	FALSE	canonical	3	1330	junction_11	99.8317247366231	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGAGCCAGAGTCTTG	-26	True	NA	37	True	AATAAA	-37	NA	231056866	231172827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_85149.known	chr2	+	4089	23	FSM	ENSG00000173692.14	ENST00000676506.1	4089	23	0	0	0	0	multi-exon	FALSE	canonical	3	1330	junction_11	93.7621066563039	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTTTTACAGAGAACGTAT	-29	True	NA	NA	False	NA	NA	NA	231056863	231167229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870
transcript_85151.nic	chr2	+	2753	22	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-22	1942	-3	0	5prime_fragment	FALSE	canonical	3	1330	junction_11	95.9205548069188	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATAAATTGGTGGTCA	NA	False	NA	76	True	AAAAAG	-37	NA	231056841	231165287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199
transcript_85152.nic	chr2	+	2648	21	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-22	3519	-3	0	5prime_fragment	FALSE	canonical	3	1330	junction_11	98.2893051150531	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGGAAAAGGTA	NA	False	NA	19	True	NA	NA	NA	231056841	231163710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634
transcript_8516.known	chr1	-	3228	18	FSM	ENSG00000009307.17	ENST00000261443.9	3228	18	0	0	0	0	multi-exon	FALSE	canonical	1	104	junction_17	878.392165178943	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	11	True	NA	-23	True	AATAAA	-14	NA	114757974	114717294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114757924
transcript_85161.known	chr2	+	3370	26	FSM	ENSG00000173692.14	ENST00000676818.1	3370	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	404.405440121668	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCCAGATGGACAAGAC	NA	False	NA	8	True	AATAAA	-6	NA	231056844	231172741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231166380_231166492_231170565_231170722_231172534
transcript_85162.known	chr2	+	761	6	FSM	ENSG00000173692.14	ENST00000440838.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	628.81234084582	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGTTCTAGTTAAAATC	-18	True	NA	NA	False	AATAAA	-20	NA	231056874	231070106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062694_231066905_231067112_231070024
transcript_85167.known	chr2	+	2148	21	FSM	ENSG00000135931.19	ENST00000682030.1	2148	21	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	58.8934631347147	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	15	True	NA	-2	True	TTTAAA	-11	NA	231198673	231345181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214833_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_85168.known	chr2	+	2397	21	FSM	ENSG00000135931.19	ENST00000684718.1	2397	21	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	57.802681598694	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCATTTTGAAAAGCA	17	True	NA	-1	True	TTTAAA	-12	NA	231198675	231345182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_85170.known	chr2	+	2064	20	FSM	ENSG00000135931.19	ENST00000436339.6	2064	20	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_19	61.5110737051927	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTTTAAAATTCAAAAT	-24	True	NA	-23	True	NA	NA	NA	231198634	231345160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231344974
transcript_85172.known	chr2	+	2091	20	FSM	ENSG00000135931.19	ENST00000683271.1	2091	20	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	52.2617533070386	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	-24	True	NA	-2	True	TTTAAA	-11	NA	231198634	231345181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_85173.nic	chr2	+	2342	20	NIC	ENSG00000135931.19	novel	2397	21	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	72.9018617076629	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	-10	True	NA	16	True	AATAAA	-17	NA	231198648	231345199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_85183.known	chr2	+	1941	12	FSM	ENSG00000135931.19	ENST00000682027.1	1941	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	74.6962997081023	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACCCTGAAGATT	-28	True	NA	NA	False	NA	NA	NA	231198630	231260004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
transcript_85195.known	chr2	+	1089	9	FSM	ENSG00000135931.19	ENST00000440107.6	1089	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	35.328591466403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGTCTAGAAACTCC	-13	True	NA	NA	False	NA	NA	NA	231198645	231240157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942
transcript_85198.nic	chr2	+	755	4	ISM	ENSG00000135931.19	ENST00000482392.2	950	9	-24	24080	18	-24080	5prime_fragment	FALSE	canonical	3	195	junction_1	50.81338406365	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTAGGCGTGTATGTCT	-47	True	NA	NA	False	AATAAA	-18	NA	231198611	231215280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830
transcript_85199.nic	chr2	+	965	4	ISM	ENSG00000135931.19	ENST00000684718.1	2397	21	-27	129902	-2	-24080	5prime_fragment	FALSE	canonical	3	9	junction_1	136.301137192615	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTAGGCGTGTATGTCT	-10	True	NA	NA	False	AATAAA	-18	NA	231198648	231215280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830
transcript_85203.nic	chr2	+	452	3	ISM	ENSG00000135931.19	ENST00000684718.1	2397	21	-27	136993	-2	-31171	5prime_fragment	FALSE	canonical	3	9	junction_1	154.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACCATTGTGTAAAAC	-10	True	NA	NA	False	AATAAA	-2	NA	231198648	231208189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231198946_231206197_231206290_231208126
transcript_85205.known	chr2	+	2333	21	FSM	ENSG00000135931.19	ENST00000683575.1	2333	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.6099614158573	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	21	False	NA	16	True	AATAAA	-17	NA	231198752	231345199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_85206.known	chr2	+	2261	16	FSM	ENSG00000135931.19	ENST00000683814.1	2261	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.4499492735791	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTAAGTCTCATTCTG	13	True	NA	-8	True	AATAGA	-3	NA	231198671	231278857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381
transcript_85207.known	chr2	+	2093	20	FSM	ENSG00000135931.19	ENST00000682002.1	2093	20	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	71.020421549075	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	-28	True	NA	-2	True	TTTAAA	-11	NA	231198630	231345181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206199_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_85208.known	chr2	+	210	1	FSM	ENSG00000237039.1	ENST00000441378.1	210	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCTTGCTCGCTGGGTC	33	False	NA	NA	False	NA	NA	NA	231256096	231256306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231256100_231256300
transcript_85209.known	chr2	+	3539	2	FSM	ENSG00000156966.7	ENST00000287590.6	3539	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	-5	True	NA	17	True	AATAAA	-19	NA	231395709	231401164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231395815_231397730
transcript_85211.known	chr2	-	504	1	FSM	ENSG00000172799.5	ENST00000423890.1	504	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACACCAAAAAAGAAAAGAC	4	False	NA	NA	False	AATGAA	-37	NA	231434426	231433922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231433900_231434400
transcript_85217.known	chr2	-	2978	14	FSM	ENSG00000115053.17	ENST00000453992.6	2978	14	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_13	1348.40720852419	15531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	3	True	NA	-77	True	AAGAAA	-16	NA	231464180	231454807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231463700
transcript_85218.known	chr2	-	2155	14	FSM	ENSG00000115053.17	ENST00000454824.6	2155	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_13	1358.41601544075	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	-16	True	NA	NA	False	NA	NA	NA	231464199	231455190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464159
transcript_85244.known	chr2	-	2674	14	FSM	ENSG00000115053.17	ENST00000678246.1	2674	14	0	0	0	0	multi-exon	TRUE	canonical	1	39	junction_1	1339.46835253978	6498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTGTTACTTCCTAAA	NA	False	NA	-21	True	ATTAAA	-16	NA	231464518	231454751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455262_231455457_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_85245.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678828.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	1	44	junction_7	1348.20350771864	34148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGTTACTTCCTAAAGAG	0	True	NA	-18	True	ATTAAA	-19	NA	231464489	231454748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458345_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_85246.known	chr2	-	2653	14	FSM	ENSG00000115053.17	ENST00000679348.1	2653	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1360.91975947003	15733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-5	True	NA	-77	True	AAGAAA	-16	NA	231464494	231454807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463313_231464335
transcript_85247.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678405.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1359.31239143723	29107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	NA	False	NA	73	True	NA	NA	NA	231464551	231454878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456160_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_8525.known	chr1	-	4097	20	FSM	ENSG00000009307.17	ENST00000358528.9	4097	20	0	0	0	0	multi-exon	FALSE	canonical	1	513	junction_15	917.208860719752	2848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	1	True	NA	-3	True	AATAAA	-25	NA	114757984	114716915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_85253.nnic	chr2	-	1686	4	Fusion	ENSG00000283491.1_ENSG00000181798.4	novel	1325	3	NA	NA	4	-4997	multi-exon	FALSE	canonical	3	5	junction_1	8.49836585598797	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGACTCCATGGCCATG	-27	True	NA	-4	True	AATAAA	-28	NA	231514392	231502086	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_-_231503205_231509177_231509344_231513526_231513633_231514096
transcript_85254.known	chr2	-	1281	3	FSM	ENSG00000181798.4	ENST00000313064.4	1325	3	44	0	33	0	multi-exon	FALSE	canonical	3	10	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTTGTGGCTCATAC	13	True	NA	NA	False	AATAAA	-13	NA	231514352	231508424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231509344_231513526_231513633_231514096
transcript_85257.known	chr2	-	1313	3	FSM	ENSG00000181798.4	ENST00000668648.2	1334	3	19	2	19	-2	multi-exon	FALSE	canonical	3	17	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCTCATACCCT	-1	True	NA	NA	False	AATAAA	-16	NA	231514366	231508421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231509344_231513526_231513633_231514081
transcript_8526.known	chr1	-	4006	19	FSM	ENSG00000009307.17	ENST00000339438.10	4006	19	0	0	0	0	multi-exon	FALSE	canonical	1	998	junction_7	557.356348098263	3579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCGCTTTCATTATTGA	2	True	NA	0	True	AATAAA	-28	NA	114757983	114716912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_8527.known	chr1	-	3459	18	FSM	ENSG00000009307.17	ENST00000530886.5	3459	18	0	0	0	0	multi-exon	FALSE	canonical	1	108	junction_16	880.542475922152	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGCCTGAAATGAATCT	593	False	NA	30	True	AATAAA	-4	NA	114758027	114717304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114749820_114750208_114757924
transcript_85275.known	chr2	+	784	5	FSM	ENSG00000187514.17	ENST00000466801.5	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	10963.6372243658	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCCAAACCATGAGAAT	234	False	NA	154	True	NA	NA	NA	231706894	231713013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231707229_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_85276.known	chr2	+	1108	5	FSM	ENSG00000187514.17	ENST00000448874.5	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_1	10964.9216709469	1935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGATGTATGTGTGA	453	False	NA	39	True	NA	NA	NA	231707629	231713465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231707836_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_8528.known	chr1	-	3774	20	FSM	ENSG00000009307.17	ENST00000369530.5	3774	20	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_18	1049.63018418189	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGTTGTGCCTGAAA	617	False	NA	23	True	TTTAAA	-18	NA	114758003	114717311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114741526_114741674_114749820_114750208_114757924
transcript_85284.known	chr2	+	933	5	FSM	ENSG00000187514.17	ENST00000409683.5	933	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	11274.1512624011	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAATGACAACAGAAA	10	True	NA	NA	False	NA	NA	NA	231708535	231713289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712451_231712517_231712803
transcript_85285.known	chr2	+	1635	4	FSM	ENSG00000187514.17	ENST00000481928.1	1635	4	0	0	0	0	multi-exon	FALSE	canonical	3	26303	junction_2	408.280132588725	2190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	4	True	NA	-31	True	NA	NA	NA	231708529	231713506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231708752_231711347_231711984_231712442_231712517_231712803
transcript_85287.known	chr2	+	1103	7	FSM	ENSG00000144524.18	ENST00000410024.5	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	319.751292239592	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCAGTGAGTTCCAGA	-21	True	NA	NA	False	NA	NA	NA	231781670	231807724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231781884_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_85292.known	chr2	+	806	5	FSM	ENSG00000144524.18	ENST00000409091.5	806	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	411.047670593083	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCAAGGGCCCATTTCC	-7	True	NA	NA	False	NA	NA	NA	231781684	231807695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231781884_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_85298.known	chr2	-	996	2	FSM	ENSG00000156973.14	ENST00000477748.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTGGAATTCCAGCCC	1	True	NA	NA	False	NA	NA	NA	231781282	231778722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231779501_231781064
transcript_85299.known	chr2	-	1140	5	FSM	ENSG00000156973.14	ENST00000287600.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	12.3970762682174	2074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCACTGCTTTTATCT	1	True	NA	-8	True	ATTAAA	-32	NA	231781282	231732432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739189_231781064
transcript_85300.known	chr2	+	2513	7	FSM	ENSG00000144524.18	ENST00000350033.8	2513	7	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_3	81.7638877092652	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	-2	True	NA	10	True	AATAAA	-22	NA	231786444	231809253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_85301.known	chr2	+	1935	6	FSM	ENSG00000144524.18	ENST00000412922.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_3	343.895914485764	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCTGGTTGGAGGGT	-2	True	NA	51	True	NA	NA	NA	231786444	231808764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231796105_231796309_231798858_231798965_231807486
transcript_85302.known	chr2	+	2563	8	FSM	ENSG00000144524.18	ENST00000373608.7	2563	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	401.538724083712	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	1	True	NA	10	True	AATAAA	-22	NA	231786447	231809253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231801154_231801208_231807486
transcript_85303.known	chr2	+	689	2	FSM	ENSG00000144524.18	ENST00000492423.5	689	2	0	0	0	0	multi-exon	TRUE	canonical	3	920	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGTATTGTTCTTGAGG	-2	True	NA	NA	False	NA	NA	NA	231786444	231789149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231786539_231788554
transcript_85304.known	chr2	+	3366	21	FSM	ENSG00000144535.20	ENST00000325385.12	3366	21	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_20	6.87459089691888	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCGCCCCCATCA	-8	True	NA	18	True	ATTAAA	-19	NA	231961712	232337192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263441_232300039_232300120_232329812_232329997_232330689_232330777_232333839_232333988_232334368_232334500_232334630_232334736_232335772_232335875_232336468
transcript_85307.known	chr2	+	2048	7	FSM	ENSG00000144535.20	ENST00000409401.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.12825877028341	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTGACCTGTGCA	163	False	NA	NA	False	AATGAA	-35	NA	231961683	232131890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618
transcript_85313.known	chr2	+	3201	14	FSM	ENSG00000144535.20	ENST00000273009.10	3201	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	16.818558360497	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGACGTATGTATGCATT	NA	False	NA	NA	False	GGGGCT	-32	NA	231961244	232344350	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263363_232343344
transcript_85321.known	chr2	+	967	7	FSM	ENSG00000135930.15	ENST00000258416.8	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_6	142.384943804541	7595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	4	True	NA	14	True	AATAAA	-14	NA	232550688	232569210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_85322.known	chr2	+	3525	8	FSM	ENSG00000135930.15	ENST00000409514.5	3525	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_7	596.299506993605	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGTCGTGGACTTGTC	-2	True	NA	18	True	AATAAA	-18	NA	232550682	232583642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232574262_232574342_232580903
transcript_85323.known	chr2	+	797	6	FSM	ENSG00000135930.15	ENST00000409322.5	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	459.325418412698	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGATCACTTAATAAAT	7	True	NA	-18	True	NA	NA	NA	232550691	232569178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_85324.known	chr2	+	3448	7	FSM	ENSG00000135930.15	ENST00000409098.5	3448	7	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_6	405.774020306322	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCGTGGACTTGTCAA	-2	True	NA	20	True	AATAAA	-20	NA	232550682	232583644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_85325.known	chr2	+	604	6	FSM	ENSG00000135930.15	ENST00000409394.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	552.397827656844	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATAATCCTTTTCTGTA	19	True	NA	NA	False	AATACA	-29	NA	232550703	232580956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_85326.known	chr2	+	1110	3	FSM	ENSG00000135930.15	ENST00000498242.5	1110	3	0	0	0	0	multi-exon	FALSE	canonical	3	1401	junction_1	15	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGAAATCTCTAATAA	6	True	NA	NA	False	CATAAA	-25	NA	232550690	232558824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883
transcript_85327.known	chr2	+	1014	6	FSM	ENSG00000135930.15	ENST00000409495.6	2693	6	0	1679	0	322	multi-exon	FALSE	canonical	3	1269	junction_5	55.1274886059577	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTTTTCTTGCTG	4	True	NA	NA	False	AATGAA	-8	NA	232550688	232567527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077
transcript_8534.known	chr1	-	349	4	FSM	ENSG00000052723.12	ENST00000510745.5	349	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	119.021006549264	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATCAGCAGTGAGTCT	151	False	NA	NA	False	NA	NA	NA	114780512	114774344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780448
transcript_85342.nic	chr2	+	1335	12	NIC	ENSG00000204120.16	novel	5976	31	NA	NA	0	-3650	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	60.1487137734053	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAGAGAAAACAGATAG	NA	False	NA	NA	False	AAGAAA	-1	NA	232697298	232791139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007
transcript_85346.nic	chr2	+	1290	11	ISM	ENSG00000204120.16	ENST00000373563.9	7816	29	-57	69466	-25	-3650	5prime_fragment	TRUE	canonical	3	135	junction_2	23.5561032431088	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAGAGAAAACAGATAG	NA	False	NA	NA	False	AAGAAA	-1	NA	232697273	232791139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007
transcript_85353.nic	chr2	+	1171	10	NIC	ENSG00000204120.16	novel	7816	29	NA	NA	-3	-3650	combination_of_known_junctions	FALSE	canonical	3	62	junction_1	40.5520546434144	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAGAGAAAACAGATAG	-6	True	NA	NA	False	AAGAAA	-1	NA	232697326	232791139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_232697393_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007
transcript_85359.known	chr2	+	529	5	FSM	ENSG00000204120.16	ENST00000464402.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	55.3821947921893	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAGATAAATTGGATT	-2	True	NA	-81	True	NA	NA	NA	232697330	232735961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232703423_232703490_232724573_232724692_232735154_232735239_232735762
transcript_85362.known	chr2	+	567	5	FSM	ENSG00000204120.16	ENST00000490612.5	567	5	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_4	52.0258349284276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAGTAACTCTATTTG	-2	True	NA	-5	True	AATAAA	-12	NA	232697330	232736037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232703423_232703490_232734416_232734487_232735154_232735239_232735752
transcript_85364.known	chr2	+	1116	5	FSM	ENSG00000204120.16	ENST00000489328.1	1116	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.9652666073281	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTATAGTTACATCTT	13	False	NA	117	True	TATAAA	-16	NA	232697382	232736648	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232735762
transcript_85368.known	chr2	+	685	4	FSM	ENSG00000204120.16	ENST00000492910.5	685	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	60.3453026801221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCTGTACTTGTTTT	-3	True	NA	NA	False	NA	NA	NA	232697329	232736234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232735762
transcript_85373.known	chr2	+	7816	29	FSM	ENSG00000204120.16	ENST00000373563.9	7816	29	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	23.739739996513	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGTACTGTCCTTC	-2	True	NA	NA	False	ATTAAA	-24	NA	232697330	232860605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_85374.known	chr2	+	5978	31	FSM	ENSG00000204120.16	ENST00000409547.5	5978	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.6361094081231	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTGCACCTCTTGTAC	-2	True	NA	22	True	AATAAA	-33	NA	232697330	232858627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232734416_232734487_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_85375.known	chr2	-	1099	3	FSM	ENSG00000115474.7	ENST00000409779.1	1099	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATGCCTATGCCTACA	0	True	NA	NA	False	NA	NA	NA	232776565	232768075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_232768814_232771138_232771379_232776444
transcript_85377.nic	chr2	-	1755	8	NIC	ENSG00000066248.15	novel	3184	15	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	5.41728149310244	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGAAGGTCTACTCTT	NA	False	NA	-20	True	AATAAA	-1	NA	232891039	232878700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232890933
transcript_85379.nic	chr2	+	1219	7	ISM	ENSG00000168918.14	ENST00000445964.6	4902	27	79235	43818	17361	-5244	internal_fragment	FALSE	canonical	3	17	junction_5	4.2687494916219	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGAGTCCTCTATCTTC	NA	False	NA	NA	False	AATAAA	-27	NA	233139576	233164085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_233139930_233146161_233146243_233146366_233146439_233147470_233147595_233158312_233158420_233161723_233161827_233163706
transcript_85385.known	chr2	+	3301	18	FSM	ENSG00000085978.22	ENST00000392021.7	3301	18	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	39.7741896104691	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	7	True	NA	28	True	AATAAA	-30	NA	233251672	233295674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_233251941_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_85387.known	chr2	+	3213	17	FSM	ENSG00000085978.22	ENST00000392020.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	19.9655954081014	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	3	True	NA	28	True	AATAAA	-30	NA	233251705	233295674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_85392.known	chr2	+	568	4	FSM	ENSG00000085978.22	ENST00000485623.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	9.46337971105226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCCCATGTCCTTTGTT	19	True	NA	NA	False	AATGAA	-42	NA	233251684	233264101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991
transcript_85394.known	chr2	-	933	5	FSM	ENSG00000085982.15	ENST00000484528.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	3.08220700148449	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGGCCTCATGTGAGA	-11	True	NA	NA	False	AATAGA	-25	NA	233566782	233556585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233557020_233559810_233559925_233562735_233562804_233565355_233565574_233566683
transcript_85396.known	chr2	-	628	4	FSM	ENSG00000085982.15	ENST00000443711.2	628	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.71547606649408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTTTGTTATTGTG	37	False	NA	NA	False	AATAAA	-17	NA	233566734	233560742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233561034_233562735_233562804_233565355_233565574_233566683
transcript_85397.known	chr2	-	3157	9	FSM	ENSG00000123485.12	ENST00000411486.7	3157	9	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_6	41.5600093238681	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGGGTTTTTTTT	-2	True	NA	-4	True	AGTAAA	-18	NA	233854535	233836701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233849762_233849860_233852564_233852621_233853843_233853911_233854383
transcript_85398.known	chr2	-	3027	7	FSM	ENSG00000123485.12	ENST00000432087.5	3027	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	192.297006968098	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTTTTTTTT	4	True	NA	-3	True	AGTAAA	-19	NA	233854566	233836700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233852564_233852621_233853843_233853911_233854383
transcript_85399.known	chr2	-	2032	2	FSM	ENSG00000224287.2	ENST00000438684.1	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGGAGTCATAACTA	NA	False	NA	NA	False	AATAAA	-24	NA	233868444	233865436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233867351_233868326
transcript_85401.nnic	chr2	-	1037	4	NNC	ENSG00000188042.8	novel	3866	2	NA	NA	435	-2093	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.79271573232759	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTGGAGGTGGTGGCCAA	-40	True	NA	-8	True	AATAAA	-32	NA	234496618	234495133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_234495396_234495554_234495614_234495727_234495837_234496011
transcript_85402.nnic	chr2	-	1200	3	NNC	ENSG00000188042.8	novel	3866	2	NA	NA	435	-2089	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	4.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGTGGTGGCCAATGAT	-40	True	NA	-4	True	AATAAA	-36	NA	234496618	234495129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_234495614_234495727_234495837_234496011
transcript_85403.known	chr2	-	3866	2	FSM	ENSG00000188042.8	ENST00000339728.6	3866	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGGGAGATTTTCTGT	-16	True	NA	-9	True	AATAAA	-18	NA	234497081	234493040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_234495837_234496011
transcript_85404.known	chr2	-	4013	1	FSM	ENSG00000188042.8	ENST00000390645.2	4013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	210	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGGGAGATTTTCTGT	12	True	NA	-9	True	AATAAA	-18	NA	234497053	234493040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_234493000_234497100
transcript_85415.nic	chr2	-	1171	4	NIC	ENSG00000235726.7	novel	890	6	NA	NA	-126	539	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	1.69967317119759	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACAGTCCGGAGACT	NA	False	NA	NA	False	NA	NA	NA	234888928	234816709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_234817379_234824932_234825114_234887776_234887818_234888648
transcript_85416.known	chr2	-	1652	4	FSM	ENSG00000235726.7	ENST00000413842.1	1652	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGTTCATGTGTTGT	NA	False	NA	NA	False	AATAAA	-3	NA	234888802	234882278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_234883479_234884699_234884957_234887776_234887818_234888648
transcript_85424.known	chr2	+	5150	6	FSM	ENSG00000130147.16	ENST00000392011.7	5150	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	14.4277510374971	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACGTATTTATACATACA	-7	True	NA	9	True	AATAAA	-18	NA	234952016	235055714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_234952171_234995302_234995377_235034870_235035121_235040887_235043248_235052561_235052751_235053591
transcript_85425.known	chr2	-	3215	19	FSM	ENSG00000132321.17	ENST00000409907.8	3215	19	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	7.26079443328821	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	-10	True	NA	-4	True	AATAAA	-16	NA	236507476	236324150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236391975_236392072_236392243_236392351_236399412_236399489_236419148_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_85427.nnic	chr2	-	1692	9	NNC	ENSG00000132321.17	novel	3215	19	NA	NA	23201	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	11.5913491449443	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	NA	False	NA	-4	True	AATAAA	-16	NA	236389690	236324150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236389591
transcript_85428.nnic	chr2	-	1735	9	NNC	ENSG00000132321.17	novel	3336	20	NA	NA	23205	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	11.3109460258636	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	NA	False	NA	-4	True	AATAAA	-16	NA	236389686	236324150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380637_236389547
transcript_8543.known	chr1	-	415	2	FSM	ENSG00000052723.12	ENST00000466657.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-22	True	NA	-13	True	AATAAA	-17	NA	114780685	114779106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114779285_114780448
transcript_85430.nic	chr2	-	1447	8	ISM	ENSG00000132321.17	ENST00000254653.9	3336	20	-69	95019	-66	-26841	5prime_fragment	FALSE	canonical	3	18	junction_2	4.96929346597888	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAACAAAGGAGAAAAATAA	NA	False	NA	NA	False	AAAAAG	-37	NA	236507601	236419169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_85431.nic	chr2	-	1395	8	ISM	ENSG00000132321.17	ENST00000254653.9	3336	20	-69	95071	-66	-26893	5prime_fragment	FALSE	canonical	3	18	junction_2	4.96929346597888	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAAAGGAAA	NA	False	NA	NA	False	AAGAAA	-11	NA	236507601	236419221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_85436.nnic	chr2	+	2071	3	NNC	ENSG00000144476.6	novel	713	2	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAAGTCTCAGTTTTC	28	False	NA	43	True	AATAAA	-20	NA	236567747	236582354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_236567842_236579006_236579069_236580439
transcript_85439.known	chr2	+	713	2	FSM	ENSG00000144476.6	ENST00000447924.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGAGCTGGTCTCCGTTG	-6	True	NA	NA	False	NA	NA	NA	236567786	236581097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_236567842_236580439
transcript_8544.known	chr1	-	412	2	FSM	ENSG00000052723.12	ENST00000474562.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATTGAAATCTTGAG	36	True	NA	-20	True	AATAAA	-10	NA	114780627	114779113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114779285_114780386
transcript_85442.known	chr2	+	2015	2	FSM	ENSG00000144476.6	ENST00000272928.4	2015	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAAGTCTCAGTTTTC	0	True	NA	43	True	AATAAA	-20	NA	236569824	236582354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_236569925_236580439
transcript_85443.known	chr2	+	1654	9	FSM	ENSG00000198612.11	ENST00000392008.6	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	465.647868565937	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTTAAGGTTATAACAG	-34	True	NA	-51	True	NA	NA	NA	237085881	237098618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237086043_237086731_237086797_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_8545.known	chr1	-	5506	5	FSM	ENSG00000052723.12	ENST00000369528.9	5506	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	103.398500956252	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGCTAATATTTTACTT	-22	True	NA	NA	False	AATAAA	-21	NA	114780685	114769478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780109_114780216_114780436
transcript_85451.known	chr2	+	3438	8	FSM	ENSG00000198612.11	ENST00000354371.7	3438	8	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	57.2199479987495	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTCCAATGTGTTCT	-27	True	NA	NA	False	AATAAA	-25	NA	237085888	237100474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237086043_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_85453.known	chr2	+	3744	16	FSM	ENSG00000115648.14	ENST00000264605.8	3744	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	15.3701008454727	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTAGCAGATGGCTAT	-34	True	NA	NA	False	AATAAA	-27	NA	237487250	237555322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237534563_237534648_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_85455.known	chr2	+	2332	15	FSM	ENSG00000115648.14	ENST00000338530.8	2332	15	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	9.05313115300278	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	-34	True	NA	24	True	AAAAAG	-21	NA	237487250	237553994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_85459.nic	chr2	+	2208	14	NIC	ENSG00000115648.14	novel	2332	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_9	13.4172899141016	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	52	False	NA	24	True	AAAAAG	-21	NA	237487218	237553994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_8546.known	chr1	-	455	3	FSM	ENSG00000052723.12	ENST00000369524.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	166	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAATTCCAGTCAATAT	473	False	NA	-35	True	ATTAAA	-16	NA	114780190	114774141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114774373_114779141_114779285_114780109
transcript_85461.nic	chr2	+	2244	14	NIC	ENSG00000115648.14	novel	2332	15	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	14.6574294024017	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	52	False	NA	24	True	AAAAAG	-21	NA	237487218	237553994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_8547.known	chr1	-	470	3	FSM	ENSG00000052723.12	ENST00000475335.5	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	7.5	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	29	True	NA	-13	True	AATAAA	-17	NA	114780634	114779106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114779285_114780109_114780216_114780448
transcript_85474.known	chr2	-	1077	5	FSM	ENSG00000124839.13	ENST00000409822.1	1077	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	356.513236079672	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCAGCCTCTGGACAG	8212	False	NA	NA	False	NA	NA	NA	237590780	237574737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237590466
transcript_85482.known	chr2	+	1301	3	FSM	ENSG00000234949.2	ENST00000452801.1	1301	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCCGGGTGCAGTGG	NA	False	NA	NA	False	AATAAA	-16	NA	237591168	237595981	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237591268_237591871_237592032_237594939
transcript_85483.known	chr2	+	589	3	FSM	ENSG00000234949.2	ENST00000470375.1	589	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGAGCTGGGCGGATCAC	NA	False	NA	NA	False	AAAAAG	-44	NA	237591019	237592006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237591268_237591565_237591772_237591871
transcript_85487.known	chr2	-	1792	5	FSM	ENSG00000124839.13	ENST00000392001.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	331.125731407271	6270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTAGAAGTTTTTGAGG	7921	False	NA	-8	True	ATTAAA	-18	NA	237591071	237574321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237585997_237586158_237590466
transcript_85488.known	chr2	-	1511	6	FSM	ENSG00000124839.13	ENST00000414278.1	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	328.473438804418	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCAAAAATTAAATTGC	14	True	NA	-41	True	NA	NA	NA	237590715	237574354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586041_237586158_237590466
transcript_85489.known	chr2	-	1603	6	FSM	ENSG00000124839.13	ENST00000264601.8	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_4	165.486434489356	6889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTTAGAAGTTTTT	-5	True	NA	-12	True	ATTAAA	-14	NA	237590734	237574325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237585997_237586158_237590466
transcript_85497.nic	chr2	+	1694	9	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-1	-1527	combination_of_known_junctions	FALSE	canonical	3	279	junction_8	260.151758594863	639	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACAAGAAGAAAAAAT	0	True	NA	NA	False	AAGAAA	-3	NA	237627605	237763434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237762602
transcript_85500.nic	chr2	+	1622	8	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	-1	-1527	combination_of_known_junctions	FALSE	canonical	3	279	junction_7	222.798343891548	648	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAACAAGAAGAAAAAAT	0	True	NA	NA	False	AAGAAA	-3	NA	237627605	237763434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
transcript_85505.known	chr2	+	857	3	FSM	ENSG00000132329.11	ENST00000404910.6	857	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTACCTCTGGAAAG	7	True	NA	-92	True	NA	NA	NA	237858892	237912010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237859128_237877223_237877363_237911527
transcript_85506.known	chr2	+	823	3	FSM	ENSG00000132329.11	ENST00000254661.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAAGACTCATTATCT	-1	True	NA	4	True	ATTAAA	-16	NA	237859622	237912106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237859728_237877223_237877363_237911527
transcript_85515.known	chr2	+	2902	19	FSM	ENSG00000258984.5	ENST00000449891.5	2902	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	159.842679215426	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	-20	True	NA	15	True	AATAAA	-16	NA	237967013	238099412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238030555_238030614_238032221_238032255_238035877_238035941_238057157_238057251_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_85516.known	chr2	+	984	11	FSM	ENSG00000184182.19	ENST00000417231.5	984	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	162.551653329026	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGGGCTTCTGAAGA	-8	True	NA	8	True	CATAAA	-14	NA	237967025	238041542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237973648_237973748_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_85523.known	chr2	+	2137	10	FSM	ENSG00000184182.19	ENST00000272930.9	2137	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_5	27.2591586149511	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGAGGGTGGCCCCTGG	-20	True	NA	NA	False	NA	NA	NA	237967013	238042782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_8553.nnic	chr1	-	1131	3	Antisense	novelGene_ENSG00000198765.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCCTATCATGATTTG	NA	False	NA	NA	False	ACTAAA	-18	NA	114902552	114898696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_114899499_114899829_114899925_114902318
transcript_85530.known	chr2	+	837	9	FSM	ENSG00000184182.19	ENST00000409633.5	837	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	141.203532179617	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGCTTCTGAAGAGTT	-20	True	NA	11	True	CATAAA	-17	NA	237967013	238041545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238041287
transcript_85531.known	chr2	+	571	9	FSM	ENSG00000184182.19	ENST00000439780.5	571	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	139.11365632101	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTTATGCCAGATGATA	26	True	NA	NA	False	AATAAA	-16	NA	237967059	238041320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238032221_238032255_238035877_238035941_238041287
transcript_85532.known	chr2	+	760	9	FSM	ENSG00000184182.19	ENST00000455999.5	760	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	136.514651228357	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACCATCTTCATGACTG	-16	True	NA	-54	True	NA	NA	NA	237967017	238041480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_85535.known	chr2	+	1242	9	FSM	ENSG00000184182.19	ENST00000441728.6	1242	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	125.840610992636	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAATGTAAGTATAT	NA	False	NA	-7	True	NA	NA	NA	237966944	238041886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_85541.known	chr2	+	1138	9	FSM	ENSG00000184182.19	ENST00000409332.5	1138	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	137.967783830139	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTGTACAATTCA	48	False	NA	24	True	NA	NA	NA	237967081	238041917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_85542.known	chr2	+	924	9	FSM	ENSG00000184182.19	ENST00000409953.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	136.622598332048	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATGCAAAATCTCT	47	False	NA	20	True	NA	NA	NA	237967080	238041770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_85544.known	chr2	+	803	8	FSM	ENSG00000184182.19	ENST00000433241.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	150.281368758467	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGGCTGTTGGTGAAA	46	False	NA	11	True	NA	NA	NA	237967079	238041605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238035877_238035941_238041287
transcript_85551.known	chr2	+	552	8	FSM	ENSG00000184182.19	ENST00000416292.5	552	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	137.900289324999	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCGGAATAAAGTGGATGA	-20	True	NA	NA	False	NA	NA	NA	237967013	238041293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_85560.known	chr2	+	2450	12	FSM	ENSG00000132330.18	ENST00000254663.12	2450	12	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_11	75.2750329027653	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	-23	True	NA	16	True	AATAAA	-17	NA	238061000	238099413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_85562.nic	chr2	+	1490	10	ISM	ENSG00000132330.18	ENST00000254663.12	2450	12	-1	4564	-1	0	5prime_fragment	FALSE	canonical	3	290	junction_9	59.1528674570816	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	-24	True	NA	8	True	ATTAAA	-18	NA	238060999	238094849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419
transcript_85564.known	chr2	+	5668	11	FSM	ENSG00000132330.18	ENST00000480357.5	5668	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	161.2781448306	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	NA	False	NA	15	True	AATAAA	-16	NA	238060927	238099412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238094523_238096800_238096877_238098201
transcript_85569.known	chr2	+	1774	8	FSM	ENSG00000132330.18	ENST00000409736.6	1774	8	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	32.5914725293696	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	7	True	NA	36	True	NA	NA	NA	238061030	238092083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217
transcript_85574.nic	chr2	+	1674	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	-1	-24	combination_of_known_junctions	FALSE	canonical	3	49	junction_6	148.43591958223	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGCTACATTTACT	-24	True	NA	12	True	NA	NA	NA	238060999	238092059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
transcript_85586.known	chr2	+	807	4	FSM	ENSG00000132330.18	ENST00000416757.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_3	10.6562449087639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACGCCTGCAAATAGGC	-9	True	NA	NA	False	AATAAA	-16	NA	238061090	238069836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296
transcript_85587.known	chr2	+	458	3	FSM	ENSG00000132330.18	ENST00000497256.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	5.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTGCTACATTTTCA	NA	False	NA	5	True	AATAAA	-17	NA	238060965	238068231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064
transcript_8559.known	chr1	-	3216	8	FSM	ENSG00000134198.10	ENST00000369516.7	3216	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	10.259888211986	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTGATTTATCTT	-13	True	NA	3	True	ATTAAA	-18	NA	115089503	115048010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_85590.known	chr2	+	770	2	FSM	ENSG00000132330.18	ENST00000487197.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGATGATGAACTAAAT	13	False	NA	NA	False	GATAAA	-13	NA	238061112	238065095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356
transcript_85591.known	chr2	+	660	4	FSM	ENSG00000132330.18	ENST00000433750.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_3	78.6652542246081	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	NA	False	NA	8	True	ATTAAA	-18	NA	238083245	238094849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238083355_238091217_238091255_238093860_238093945_238094419
transcript_85593.known	chr2	-	689	3	FSM	ENSG00000186235.12	ENST00000475669.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTGCGCACATCGTTA	8	True	NA	NA	False	AGTAAA	-29	NA	238231585	238224551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_238224874_238227683_238227799_238231333
transcript_85594.known	chr2	-	730	3	FSM	ENSG00000186235.12	ENST00000409070.6	1010	3	280	0	-61	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTCAATTTATTCACCG	9238	False	NA	NA	False	AATAAA	-14	NA	238231431	238225115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_238225500_238227683_238227799_238231200
transcript_85595.known	chr2	-	691	3	FSM	ENSG00000186235.12	ENST00000409942.5	881	3	186	4	60	0	multi-exon	FALSE	canonical	2	3	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTCAATTTATTCACCG	9144	False	NA	NA	False	AATAAA	-14	NA	238231525	238225115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_238225500_238227683_238227799_238231333
transcript_85597.known	chr2	+	4003	15	FSM	ENSG00000204104.12	ENST00000391993.7	4003	15	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	14.449066066846	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTCAAATTGTATCATA	NA	False	NA	6	True	AGTAAA	-16	NA	238320440	238400822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238320786_238325305_238325375_238325808_238325971_238328685_238328830_238328925_238329343_238332823_238332896_238333959_238334036_238347454_238347476_238348763_238348849_238349324_238349409_238352826_238352951_238353172_238353210_238356003_238356081_238397458_238397680_238398753
transcript_85603.known	chr2	+	6891	5	FSM	ENSG00000065802.12	ENST00000264607.9	6891	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.0242493430549	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTGTGTTCTGCCTC	-1	True	NA	18	True	AATAAA	-24	NA	238426926	238452250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238427120_238433553_238433696_238435710_238436014_238444341_238444728_238446383
transcript_85605.known	chr2	+	878	4	FSM	ENSG00000065802.12	ENST00000409297.1	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	50.2084543567006	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAAGATGTCCTCGTAG	-31	True	NA	-84	True	NA	NA	NA	238427003	238446617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238427120_238433553_238433696_238444341_238444728_238446383
transcript_85611.known	chr2	+	384	2	FSM	ENSG00000222020.4	ENST00000409526.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTTAAATATCTCATTA	NA	False	NA	19	True	AATAAA	-16	NA	239401435	239402357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_239401537_239402074
transcript_85612.known	chr2	+	455	2	FSM	ENSG00000222020.4	ENST00000413029.2	560	2	102	3	55	2	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATCTCATTAATAATTA	35	False	NA	26	True	AATAAA	-23	NA	239401804	239402364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_239401970_239402074
transcript_85619.known	chr2	-	4855	10	FSM	ENSG00000130414.13	ENST00000252711.7	4855	10	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	52.9947586506859	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATACCTGGTGATTATATT	-5	True	NA	-2	True	AATAAA	-17	NA	240025342	239957371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_85620.known	chr2	-	1535	11	FSM	ENSG00000130414.13	ENST00000620965.5	1535	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	264.789274707266	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCCATCGTACGTCTA	-5	True	NA	-19	True	AATAAA	-16	NA	240025342	239960739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240012486_240012535_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_85621.known	chr2	-	4509	9	FSM	ENSG00000130414.13	ENST00000485344.6	4509	9	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_3	47.2149340781071	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCCCATCGTACGTCT	14	True	NA	-20	True	AATAAA	-15	NA	240025323	239960740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_239961187_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_85622.known	chr2	-	1580	10	FSM	ENSG00000130414.13	ENST00000444548.6	1580	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	208.720972699066	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTAATGTCTTTGT	-3	True	NA	-25	True	NA	NA	NA	240025340	239969220	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_239969763_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_85623.known	chr2	-	699	4	FSM	ENSG00000130414.13	ENST00000407129.3	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_3	25.8370965001015	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTTCCTAAGTATCTTC	30	True	NA	NA	False	AATAAA	-33	NA	240025307	240018406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240018640_240021196_240021413_240022171_240022341_240025226
transcript_85624.known	chr2	-	640	3	FSM	ENSG00000172428.11	ENST00000489698.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	880	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	4495	False	NA	-24	True	ATTAAA	-15	NA	240136176	240130827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240131089_240133932_240134006_240135870
transcript_85627.known	chr2	-	418	3	FSM	ENSG00000172428.11	ENST00000607357.2	418	3	0	0	0	0	multi-exon	FALSE	canonical	3	1499	junction_2	143	18589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-6	True	NA	-24	True	ATTAAA	-15	NA	240136305	240130827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240131089_240133932_240134006_240136221
transcript_85628.known	chr2	-	645	5	FSM	ENSG00000178602.8	ENST00000391989.6	645	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.82915619758885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCGTTGTGGGTTGTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	240144562	240139025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240139355_240140061_240140089_240140268_240140445_240140619_240140694_240144523
transcript_85629.nic	chr2	+	805	5	ISM	ENSG00000063660.9	ENST00000495100.1	3525	7	6486	0	-854	0	3prime_fragment	FALSE	canonical	3	169	junction_4	32.86335345031	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTCAGCCTGGAGA	5614	False	NA	5	True	AATACA	-16	NA	240464672	240466358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_85630.known	chr2	+	3719	9	FSM	ENSG00000063660.9	ENST00000264039.7	3719	9	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_8	34.1796723214252	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCGAGGCCTCGGG	-23	True	NA	22	True	AATAAA	-15	NA	240435662	240468076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_85632.known	chr2	+	837	1	FSM	ENSG00000287049.1	ENST00000654460.1	837	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCATGTAGTCTATTA	NA	False	NA	NA	False	ATTAAA	-31	NA	240558088	240558925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_240558100_240558900
transcript_85635.nic	chr2	+	547	2	ISM	ENSG00000184945.15	ENST00000471878.1	523	3	225	0	225	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTCCCCCTGGGC	3888	False	NA	NA	False	AATAAA	-12	NA	240695757	240698482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_240695979_240698156
transcript_85640.nic	chr2	-	1053	10	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-15	8055	-13	5461	5prime_fragment	FALSE	canonical	3	225	junction_1	25.7164020293145	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGGCTTCCTTCAGCC	1159	False	NA	NA	False	NA	NA	NA	240820232	240782589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_85645.nic	chr2	-	1036	9	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-15	8508	-13	5008	5prime_fragment	FALSE	canonical	3	232	junction_2	23.7012657889827	237	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCCCGGCCCGGCTT	1159	False	NA	-10	True	NA	NA	NA	240820232	240783042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_8565.known	chr1	-	793	7	FSM	ENSG00000134198.10	ENST00000369515.6	793	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	31.4876519007407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTATGTTTGGCTCATT	-10	True	NA	12	True	NA	NA	NA	115089500	115050355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115062134_115062233_115072904_115073008_115089363
transcript_85658.known	chr2	-	3993	5	FSM	ENSG00000122085.17	ENST00000464344.6	3993	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	26.0480325552622	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGCTTCTAAAATGTT	NA	False	NA	NA	False	AATAAA	-17	NA	241102332	241072168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241075683_241089187_241089366_241089979_241090045_241094276_241094433_241102252
transcript_8566.known	chr1	-	671	7	FSM	ENSG00000134198.10	ENST00000433172.3	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	31.2552217859494	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCAATTGTACATT	9970	False	NA	-15	True	NA	NA	NA	115089414	115050382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115050556_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_85662.known	chr2	-	576	5	FSM	ENSG00000122085.17	ENST00000493169.1	576	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.4225678688995	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATAAGGGGCAGGAAGAG	NA	False	NA	-102	True	NA	NA	NA	241102332	241089272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241089366_241089979_241090045_241094276_241094430_241097242_241097428_241102252
transcript_85666.known	chr2	-	3854	4	FSM	ENSG00000122085.17	ENST00000488567.5	3854	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	32.5200792673627	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTATTGTGGTACAGTA	6230	False	NA	-19	True	ATTAAA	-33	NA	241096070	241087203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241089366_241089979_241090045_241094276_241094430_241094596
transcript_85667.known	chr2	-	614	4	FSM	ENSG00000122085.17	ENST00000476564.5	614	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	25.0377492776186	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGGGAAATGCTGGCT	-20	True	NA	NA	False	NA	NA	NA	241102320	241089040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241102252
transcript_85671.known	chr2	-	585	3	FSM	ENSG00000122085.17	ENST00000480298.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	35	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCCTGCCCCACTTTT	-11	True	NA	NA	False	NA	NA	NA	241102311	241088904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241089366_241089979_241090045_241102252
transcript_85672.known	chr2	-	802	3	FSM	ENSG00000122085.17	ENST00000406593.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	45.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATAAGTCACCTG	1	True	NA	NA	False	NA	NA	NA	241102299	241095868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241096439_241097242_241097428_241102252
transcript_85673.known	chr2	-	1587	4	FSM	ENSG00000122085.17	ENST00000391980.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	12.3648246606609	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	13	True	NA	-16	True	AATAAA	-16	NA	241102287	241095570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241096439_241097242_241097428_241099395_241099895_241102252
transcript_85674.known	chr2	-	4540	18	FSM	ENSG00000115687.14	ENST00000234040.9	4540	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	36.3397082330564	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTGGATGTTGTGA	-2	True	NA	-5	True	ATTAAA	-24	NA	241149472	241106098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115042_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_85680.known	chr2	+	1941	10	FSM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_8	95.0451484659453	1943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	-13	True	NA	21	True	TATAAA	-18	NA	241150466	241183652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_85682.known	chr2	+	959	9	FSM	ENSG00000115685.15	ENST00000423280.5	959	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	161.288900346552	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCGGCAGATCGATGC	24	True	NA	NA	False	NA	NA	NA	241149612	241182784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_85685.known	chr2	+	976	9	FSM	ENSG00000115685.15	ENST00000438799.5	976	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	166.413218750795	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTCTGGGTAAGTTTA	-13	True	NA	NA	False	AATAGA	-41	NA	241149575	241169856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241149709_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780
transcript_85688.known	chr2	+	965	9	FSM	ENSG00000115685.15	ENST00000406106.7	965	9	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_8	97.3420997051122	2384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	0	True	NA	18	True	AATAAA	-19	NA	241150479	241167174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_85689.known	chr2	+	1592	11	FSM	ENSG00000115685.15	ENST00000407025.5	1592	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.243796876756	1576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGGTGATTGTTGACA	-3	True	NA	27	True	ATTAAA	-16	NA	241149637	241183024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241149709_241150258_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_85692.known	chr2	+	1954	9	FSM	ENSG00000115685.15	ENST00000272983.12	1954	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	163.485043276136	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGCCGTTGCAAT	17	False	NA	-12	True	AATAAA	-40	NA	241149657	241182985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_85693.known	chr2	+	883	8	FSM	ENSG00000115685.15	ENST00000402734.5	883	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	174.676026648519	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTACTTGTTTTTTTCT	3	True	NA	16	True	AATAAA	-17	NA	241149591	241167172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_85700.known	chr2	+	820	8	FSM	ENSG00000115685.15	ENST00000401987.5	820	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	177.024960767384	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	16	True	NA	18	True	AATAAA	-19	NA	241150495	241167174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_8571.known	chr1	-	1061	3	FSM	ENSG00000134259.6	ENST00000369512.3	1061	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-6	True	NA	NA	False	ATTAAA	-13	NA	115338249	115285916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115286808_115293626_115293751_115338203
transcript_85713.known	chr2	-	4326	18	FSM	ENSG00000115687.14	ENST00000358649.8	4326	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	52.3916578583727	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGAAGGCATGAGTG	836	False	NA	-13	True	ATTAAA	-17	NA	241149435	241106296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115021_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_85715.known	chr2	+	2196	2	FSM	ENSG00000146205.15	ENST00000487192.1	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCCTTGGAGTTCTA	NA	False	NA	10	True	NA	NA	NA	241218184	241225184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241218382_241223185
transcript_85716.known	chr2	+	726	4	FSM	ENSG00000146205.15	ENST00000402530.8	726	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTTTATGACTCTC	-11	True	NA	NA	False	ATTAAA	-19	NA	241188676	241196168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241188767_241190056_241190172_241191193_241191252_241195705
transcript_8572.known	chr1	-	941	2	FSM	ENSG00000134259.6	ENST00000675637.2	941	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-10	True	NA	NA	False	ATTAAA	-13	NA	115338253	115285916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115286808_115338203
transcript_85723.known	chr2	-	6372	28	FSM	ENSG00000115677.18	ENST00000391975.5	6372	28	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_27	231.316047550954	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTGCCGCCTGTGTGTTCT	NA	False	NA	-4	True	AATAAA	-41	NA	241272886	241227263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241272760
transcript_85724.known	chr2	-	4489	28	FSM	ENSG00000115677.18	ENST00000391976.6	4489	28	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_27	201.263771265826	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	424	False	NA	NA	False	AATAAA	-26	NA	241315292	241229211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315101
transcript_85725.known	chr2	-	6322	28	FSM	ENSG00000115677.18	ENST00000310931.10	6322	28	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_27	210.721616003919	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGCTGGGACTCAT	-10	True	NA	-31	True	AATAAA	-14	NA	241315672	241227290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
transcript_8573.known	chr1	+	8647	8	FSM	ENSG00000173218.15	ENST00000369510.8	8647	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.2267822992599	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTTTCTTTTCTTCA	12	True	NA	17	True	AATAAA	-17	NA	115641990	115698224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_115642087_115651276_115651485_115659640_115659768_115663660_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
transcript_85733.known	chr2	+	3251	13	FSM	ENSG00000168385.18	ENST00000391971.7	3251	13	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	312.962324676097	9926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	1	True	NA	NA	False	AATAAA	-23	NA	241315924	241354027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_85738.known	chr2	+	3446	14	FSM	ENSG00000168385.18	ENST00000616972.4	3446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1411.51329258634	6690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	-5	True	NA	NA	False	AATAAA	-20	NA	241315860	241354024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241316421_241316556_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_85739.known	chr2	+	3333	14	FSM	ENSG00000168385.18	ENST00000402092.6	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1434.56164056889	8476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	4	True	NA	NA	False	AATAAA	-23	NA	241315927	241354027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241320202_241320288_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_85743.known	chr2	+	3701	13	FSM	ENSG00000168385.18	ENST00000391973.6	3701	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	1077.97444762027	6852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	-5	True	NA	NA	False	AATAAA	-20	NA	241315099	241354024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315611_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_85752.known	chr2	+	3267	12	FSM	ENSG00000168385.18	ENST00000407971.5	3267	12	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	1125.52503818007	8373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	17	False	NA	NA	False	AATAAA	-23	NA	241315882	241354027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_85774.known	chr2	+	1163	5	FSM	ENSG00000168385.18	ENST00000461048.5	1163	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	157.125745821619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTTTCAGTATGC	-30	True	NA	NA	False	AATAAA	-16	NA	241315893	241325244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241316429_241316541_241317498_241317600_241324215_241324242_241324408
transcript_85788.known	chr2	+	775	8	FSM	ENSG00000168385.18	ENST00000436795.5	775	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1961.63506352455	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTACTTTATTTCACCT	-19	True	NA	NA	False	NA	NA	NA	241315904	241337485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241316421_241316556_241317498_241317600_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381
transcript_85789.known	chr2	+	801	2	FSM	ENSG00000168385.18	ENST00000451310.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGTTTTTAAAACCACT	6272	False	NA	90	True	TTTAAA	-23	NA	241350086	241352626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241350204_241351942
transcript_85790.known	chr2	+	372	5	FSM	ENSG00000168385.18	ENST00000441533.5	372	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	1816.78567461878	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAAACATTCTTATGT	20	True	NA	25	True	NA	NA	NA	241315943	241335210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241317498_241317600_241324215_241324242_241325992_241326114_241335125
transcript_85791.known	chr2	+	2122	18	FSM	ENSG00000006607.14	ENST00000627550.2	2122	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_17	17.9680608601113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCGCCTGTCCCACCTTC	-1	True	NA	NA	False	NA	NA	NA	241356288	241465778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241465673
transcript_85794.known	chr2	+	4009	27	FSM	ENSG00000006607.14	ENST00000264042.8	4009	27	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_19	16.8608997633104	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATTCTCCTCTGCCTG	-5	True	NA	10	True	AATAAA	-18	NA	241356284	241494841	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241468139_241468378_241475856_241475988_241483464_241483534_241484241_241484332_241489961_241490045_241491060_241491180_241491515_241491680_241492928_241493037_241493292_241493445_241494007
transcript_85798.known	chr2	+	839	3	FSM	ENSG00000006607.14	ENST00000479427.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	34	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTAGTACTTTAAAAAT	9	True	NA	NA	False	NA	NA	NA	241356298	241395984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241356389_241373083_241373291_241395442
transcript_85799.known	chr2	+	617	6	FSM	ENSG00000006607.14	ENST00000478489.5	617	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.8785194135487	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGTAGCACTTCTCAG	5	True	NA	NA	False	ATTAAA	-16	NA	241356294	241405403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241356389_241373083_241373291_241395442_241395459_241403827_241403933_241404798_241404842_241405251
transcript_858.nic	chr1	-	732	6	ISM	ENSG00000248333.9	ENST00000341028.8	881	9	-228	7836	-188	-7836	5prime_fragment	FALSE	canonical	3	22	junction_4	30.4144702403313	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCACGAACGTCGGAAA	-9	True	NA	17	True	AAAAAG	-4	NA	1659200	1649607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_85800.known	chr2	+	2580	18	FSM	ENSG00000006607.14	ENST00000373287.8	2580	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	19.1001730095971	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATACTGTAGTCATCT	7	True	NA	6	True	AATATA	-22	NA	241356296	241466030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241434157_241434322_241434961_241435031_241436480_241436539_241441303_241441557_241456746_241456923_241462522_241462613_241463334_241463469_241463898_241463981_241465459
transcript_85801.known	chr2	-	2210	12	FSM	ENSG00000115694.15	ENST00000403346.7	2210	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	252.580532939169	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	4	False	NA	-5	True	AATAAA	-18	NA	241508688	241495016	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508504
transcript_85805.known	chr2	-	2459	11	FSM	ENSG00000115694.15	ENST00000535007.5	2459	11	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_10	252.400891440581	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	-3	False	NA	-1	True	AATAAA	-40	NA	241508695	241494706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
transcript_85807.known	chr2	-	2556	11	FSM	ENSG00000115694.15	ENST00000543554.5	2556	11	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_10	282.060082251991	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	NA	False	NA	-1	True	AATAAA	-40	NA	241509572	241494706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241509222
transcript_8581.known	chr1	+	3670	23	FSM	ENSG00000163399.16	ENST00000295598.10	3670	23	0	0	0	0	multi-exon	FALSE	canonical	3	2123	junction_6	227.721670226856	5873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTGCCCTCGTCGC	2	True	NA	15	True	AATAAA	-20	NA	116373243	116404774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_116373524_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
transcript_85816.known	chr2	-	797	2	FSM	ENSG00000115694.15	ENST00000494699.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCAATAAAGACCTGAC	NA	False	NA	13	True	NA	NA	NA	241496538	241495045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397
transcript_85817.known	chr2	+	2626	5	FSM	ENSG00000176720.6	ENST00000318407.5	2626	5	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_1	31.7804971641414	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAATGTCACTGTGTGT	1	True	NA	22	True	AATAAA	-28	NA	241558744	241574131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241558994_241559454_241559704_241562347_241562477_241570124_241570289_241572296
transcript_85820.known	chr2	-	2076	6	FSM	ENSG00000176946.13	ENST00000407315.6	2076	6	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_4	35.3134535269492	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-43	True	NA	-2	True	AATAAA	-38	NA	241637158	241584404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241632916_241634080_241636940
transcript_85822.known	chr2	-	785	5	FSM	ENSG00000176946.13	ENST00000402136.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	256.902218752583	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	2173	False	NA	-2	True	AATAAA	-38	NA	241617501	241584404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241617411
transcript_85826.nic	chr2	+	1636	14	NIC	ENSG00000168397.17	novel	1566	13	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	122	junction_3	199.550056006184	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	4	True	NA	-16	True	NA	NA	NA	241637651	241672592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_8583.known	chr1	+	1728	3	FSM	ENSG00000163399.16	ENST00000488733.1	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	2312	junction_2	160.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	2	True	NA	NA	False	NA	NA	NA	116373268	116386144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_116373524_116384013_116384125_116384782
transcript_85831.known	chr2	+	2414	13	FSM	ENSG00000168397.17	ENST00000482507.5	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	207.661984965954	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACATGAATTTCTGGG	6	True	NA	23	True	ATTAAA	-22	NA	241637697	241672631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
transcript_85833.known	chr2	+	2797	13	FSM	ENSG00000168397.17	ENST00000404914.8	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_7	74.2836156602218	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	1	True	NA	74	True	AAAACA	-3	NA	241637692	241673857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_85834.known	chr2	+	1685	13	FSM	ENSG00000168397.17	ENST00000402096.5	1685	13	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_12	188.924349204178	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGACATGAATTTCT	NA	False	NA	20	True	ATTAAA	-19	NA	241637611	241672628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671442_241672190
transcript_8584.known	chr1	-	1828	3	FSM	ENSG00000203865.12	ENST00000369492.5	1828	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTGTTCCTTTTTT	13	True	NA	-4	True	TATAAA	-17	NA	116418583	116404713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116406149_116406927_116407196_116418458
transcript_8585.known	chr1	-	2639	2	FSM	ENSG00000203865.12	ENST00000675524.1	2639	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTCTTCACTAAATGAT	NA	False	NA	NA	False	TTTAAA	-39	NA	116418641	116390570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116393027_116418458
transcript_85857.known	chr2	+	625	7	FSM	ENSG00000168397.17	ENST00000400772.6	625	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	327.644497384996	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGTCCTGAAGTATGTA	NA	False	NA	NA	False	NA	NA	NA	241637625	241655330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241651883_241651975_241653511_241653611_241654545_241654648_241655270
transcript_85858.known	chr2	+	807	7	FSM	ENSG00000168397.17	ENST00000425239.5	807	7	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	88.6367430709309	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTTATGAAGGCCCT	15	False	NA	NA	False	NA	NA	NA	241637706	241659448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107
transcript_8586.known	chr1	-	4746	2	FSM	ENSG00000203865.12	ENST00000674823.1	4746	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAGATCTTGTTCCTAA	-29	True	NA	NA	False	NA	NA	NA	116418625	116401569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116406149_116418458
transcript_85860.known	chr2	+	556	6	FSM	ENSG00000168397.17	ENST00000479554.5	556	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	354.190570173741	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTTTCCCCTCAGAGCTT	1	True	NA	-56	True	NA	NA	NA	241637692	241654705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241651883_241651975_241653511_241653611_241654545
transcript_85864.known	chr2	+	581	6	FSM	ENSG00000168397.17	ENST00000465399.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	94.8021096811669	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATTTACTTCATGGCC	1	True	NA	NA	False	NA	NA	NA	241637692	241655444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270
transcript_85865.known	chr2	+	1103	6	FSM	ENSG00000168397.17	ENST00000483778.5	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	276.172844428992	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCATTGCCTTTTTCAC	14	False	NA	NA	False	NA	NA	NA	241637661	241659772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241659107
transcript_85868.known	chr2	+	762	5	FSM	ENSG00000168397.17	ENST00000475195.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_1	89.5610825079733	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGCTTTTGAGCACTGT	1	True	NA	3	True	AGTAAA	-27	NA	241637692	241655002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545
transcript_85873.known	chr2	+	1566	13	FSM	ENSG00000168397.17	ENST00000344376.9	1566	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	207.690658726439	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-16	True	NA	NA	NA	241651006	241672592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_85878.known	chr2	-	1051	5	FSM	ENSG00000168393.13	ENST00000305784.7	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_2	183.80016322082	3056	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	-11	True	NA	-10	True	AGTAAA	-15	NA	241686815	241675746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241676238_241678451_241678650_241680228_241680320_241685768_241685878_241686653
transcript_8588.known	chr1	-	301	2	FSM	ENSG00000203865.12	ENST00000676321.1	301	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCAGAAAAATTGGGATA	21	True	NA	NA	False	AATAAA	-24	NA	116418575	116413729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116413914_116418458
transcript_85880.known	chr2	+	946	8	FSM	ENSG00000168395.16	ENST00000406941.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.9177118520254	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTGCCTGTGCT	0	True	NA	11	True	AATAAA	-21	NA	241702045	241724036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241723790
transcript_85881.known	chr2	+	920	6	FSM	ENSG00000168395.16	ENST00000489509.1	920	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	98.2087572469991	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGCTCTGGATCTAGC	19	False	NA	NA	False	NA	NA	NA	241702064	241719919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241719482
transcript_85883.known	chr2	+	822	5	FSM	ENSG00000168395.16	ENST00000492488.5	822	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.8617522019678	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACAGGAGGATGGTGAG	-11	True	NA	NA	False	NA	NA	NA	241702034	241712380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977
transcript_85886.known	chr2	+	543	4	FSM	ENSG00000168395.16	ENST00000493261.5	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	19.8158185969358	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGCTTACGCCTG	0	True	NA	NA	False	NA	NA	NA	241702045	241711623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376
transcript_85887.known	chr2	+	5197	8	FSM	ENSG00000168395.16	ENST00000313552.11	5197	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	67.2976938077133	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGAAAGTGCATCTGTA	-7	True	NA	NA	False	AATAAA	-22	NA	241702038	241729478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241724988
transcript_85888.known	chr2	-	2097	5	FSM	ENSG00000188389.11	ENST00000334409.10	2097	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.08972473588517	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTCTGTCCTGTCTGGT	1	True	NA	NA	False	ATTAAA	-17	NA	241858894	241849883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241851298_241851948_241851984_241852197_241852354_241852620_241852981_241858762
transcript_8589.known	chr1	-	1086	6	FSM	ENSG00000116815.16	ENST00000369489.10	1086	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	9.09065454189081	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGGTTTGGCTACTGT	-9	True	NA	-1	True	AATAAA	-22	NA	116571026	116514533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116514823_116519230_116519268_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_85895.known	chr2	-	507	3	FSM	ENSG00000216921.9	ENST00000401641.2	507	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTCTAGCGCATCTCT	NA	False	NA	NA	False	NA	NA	NA	241902551	241894036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241894340_241897185_241897335_241902496
transcript_85902.known	chr2	+	557	4	FSM	ENSG00000220804.10	ENST00000444990.6	577	4	20	0	-5	0	multi-exon	FALSE	canonical	2	10	junction_2	4.18993502999218	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGCATATGAGGAGCTT	-25	True	NA	NA	False	AAAACA	-45	NA	242088678	242116372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182
transcript_85903.known	chr2	+	1235	8	FSM	ENSG00000220804.10	ENST00000456398.5	1235	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.75821495572278	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTTTTTTTTTAA	2478	False	NA	NA	False	NA	NA	NA	242088632	242140638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182_242116233_242118964_242119058_242122286_242122456_242138783_242138889_242140233
transcript_85907.known	chr20	-	1576	11	FSM	ENSG00000196476.12	ENST00000360321.7	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	56.7645135626123	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-7	True	NA	-14	True	AATAAA	-18	NA	290750	270862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290590
transcript_85908.nic	chr20	-	1568	10	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	291	0	-30	0	3prime_fragment	FALSE	canonical	3	97	junction_8	36.6090456338624	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-3	True	NA	-14	True	AATAAA	-18	NA	290459	270862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_8591.known	chr1	-	874	6	FSM	ENSG00000116815.16	ENST00000464088.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	29.0544316757358	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTATTACAATTTTTGAAC	33	True	NA	NA	False	AAAAAG	-19	NA	116570984	116514738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116514823_116519230_116519303_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_85914.known	chr20	-	1420	9	FSM	ENSG00000196476.12	ENST00000382369.9	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_8	45.912961132996	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-22	True	NA	-14	True	AATAAA	-18	NA	290429	270862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
transcript_85917.nic	chr20	-	2274	9	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-30	0	intron_retention	FALSE	canonical	3	97	junction_7	38.2604152486614	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-3	True	NA	-14	True	AATAAA	-18	NA	290459	270862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_271268_275967_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_85926.nic	chr20	-	1694	2	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	291	17321	-30	-17321	internal_fragment	FALSE	canonical	3	125	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	-3	True	NA	NA	False	NA	NA	NA	290459	288183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_289677_290258
transcript_85927.nic	chr20	-	447	2	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	291	18568	-30	-18568	internal_fragment	FALSE	canonical	3	125	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGATATAGAAGTTTAT	-3	True	NA	-6	True	AATAAA	-18	NA	290459	289430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_289677_290258
transcript_85928.known	chr20	-	1608	11	FSM	ENSG00000196476.12	ENST00000400269.4	1608	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	60.3867535143263	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-35	True	NA	-14	True	AATAAA	-18	NA	290778	270862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290586
transcript_85929.known	chr20	+	2752	1	FSM	ENSG00000247315.4	ENST00000500893.4	2752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCACTATTTCCTTTC	-3	True	NA	37	True	AATAAA	-25	NA	297569	300321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_297600_300300
transcript_85934.known	chr20	+	504	5	FSM	ENSG00000125841.13	ENST00000608467.5	504	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	116.295689945931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAAAGTCTTGTTGA	12	True	NA	NA	False	AATGAA	-12	NA	347119	359405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_347143_349248_349364_349637_349833_355325_355350_359258
transcript_85936.known	chr20	+	2074	5	FSM	ENSG00000125841.13	ENST00000382285.7	2074	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	121.653195601266	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGACTTTGTTTCCTTTC	3	True	NA	24	True	AATAAA	-14	NA	347110	354862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_347143_347433_347513_349248_349364_349637_349833_353209
transcript_8594.known	chr1	-	892	4	FSM	ENSG00000116815.16	ENST00000369487.3	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	8.2192186706253	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTTACGTGTGT	-22	True	NA	NA	False	AATAAA	-36	NA	116571039	116521786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116521984_116535964_116536229_116544310_116544605_116570902
transcript_85941.known	chr20	+	2088	4	FSM	ENSG00000125841.13	ENST00000382291.7	2088	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	37.1872140511882	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCCTTTCTCCCTG	216	False	NA	30	True	AATAAA	-20	NA	347023	354868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_347143_349248_349364_349637_349833_353209
transcript_85946.known	chr20	+	846	3	FSM	ENSG00000125841.13	ENST00000492242.5	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	70.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCATAACCCCCTCTC	75	False	NA	NA	False	NA	NA	NA	346882	353680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_347143_349248_349364_353209
transcript_85948.known	chr20	-	1411	3	FSM	ENSG00000225377.6	ENST00000414676.6	1411	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGTTTGTGTTTGT	-4	True	NA	-3	True	NA	NA	NA	325269	319686	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_320782_322377_322566_325141
transcript_85949.known	chr20	-	768	3	FSM	ENSG00000225377.6	ENST00000442637.2	768	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTGTTGGGAATTTG	264	False	NA	NA	False	NA	NA	NA	348224	320326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_320782_322377_322566_348099
transcript_85951.known	chr20	-	4204	3	FSM	ENSG00000225377.6	ENST00000657126.1	4204	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAATCTGACACAAGAACTG	804	False	NA	NA	False	AATAAA	-15	NA	324461	316859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_320782_322377_322566_324367
transcript_85954.known	chr20	+	4673	1	FSM	ENSG00000177732.9	ENST00000342665.5	4673	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	160	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTCATTGTCTGTTT	1	True	NA	21	True	AATAAA	-17	NA	325551	330224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_325600_330200
transcript_85955.known	chr20	+	2356	4	FSM	ENSG00000101255.12	ENST00000217233.9	2356	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	11.6714276000077	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTCTCTGCAATT	3	True	NA	NA	False	AATAAA	-18	NA	380759	397559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_381170_388010_388302_391286_391580_396197
transcript_85956.known	chr20	+	1070	4	FSM	ENSG00000101255.12	ENST00000449710.5	1070	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	47.5417944783558	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCGCGGGGCCTACG	212	False	NA	NA	False	NA	NA	NA	381245	396428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_381501_388010_388302_391286_391580_396197
transcript_85959.known	chr20	+	3701	12	FSM	ENSG00000125826.21	ENST00000356286.10	3701	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	23.8788263343791	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCTTGGTAATGCC	-20	True	NA	16	True	ATTAAA	-28	NA	408298	432139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_85963.known	chr20	+	1024	3	FSM	ENSG00000125826.21	ENST00000400245.3	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	44	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	-14	True	NA	20	True	AATAAA	-19	NA	408304	410764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_409829_410026_410411
transcript_85964.known	chr20	+	1200	3	FSM	ENSG00000125826.21	ENST00000475269.5	1200	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	12	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	8	True	NA	20	True	AATAAA	-19	NA	408077	410764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_409880_410026_410411
transcript_85966.known	chr20	+	790	2	FSM	ENSG00000125826.21	ENST00000400247.3	790	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	24	True	NA	20	True	AATAAA	-19	NA	408342	410764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_410411
transcript_85968.known	chr20	-	12984	14	FSM	ENSG00000101266.19	ENST00000217244.9	12984	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	262.161858851905	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	-6	True	NA	-1	True	NA	NA	NA	543790	472497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
transcript_85972.known	chr20	-	2319	13	FSM	ENSG00000101266.19	ENST00000644003.1	2319	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	326.345633067492	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGGAGCAGAGCCACTA	8	True	NA	NA	False	NA	NA	NA	543735	482886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_543671
transcript_85975.known	chr20	-	4047	12	FSM	ENSG00000101266.19	ENST00000349736.10	4047	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	215.724495250863	2817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCCTGCAGCCTGAG	-8	True	NA	-39	True	AATAAA	-17	NA	543792	481109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_543671
transcript_85982.known	chr20	-	2822	14	FSM	ENSG00000101266.19	ENST00000643660.1	2822	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	201.651318958914	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGAATATCTGTGTC	11	True	NA	-11	True	NA	NA	NA	543732	472507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_85983.known	chr20	-	2586	13	FSM	ENSG00000101266.19	ENST00000645234.1	2586	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	213.779806238933	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGGTTTTATTTATCA	-1	True	NA	13	True	NA	NA	NA	543712	482714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484091_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_85984.known	chr20	-	2018	4	FSM	ENSG00000101266.19	ENST00000609606.6	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_3	60.0351748745868	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-6	True	NA	NA	False	NA	NA	NA	543790	498357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_499935_505117_505230_508450_508661_543671
transcript_85985.known	chr20	-	2479	12	FSM	ENSG00000101266.19	ENST00000644885.1	2479	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	225.700122850089	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATAAACGTTTGGTTT	-1	True	NA	4	True	NA	NA	NA	543712	482723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_85986.known	chr20	-	2654	6	FSM	ENSG00000101276.18	ENST00000217254.11	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	5.00399840127872	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	NA	False	NA	-7	True	AATAAA	-18	NA	776015	760079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_761239_761700_761825_763497_764004_765207_765826_768296_768483_775954
transcript_85987.known	chr20	-	911	3	FSM	ENSG00000101276.18	ENST00000674666.1	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTCATCCAGCTGGCCA	-3	True	NA	NA	False	NA	NA	NA	775985	765640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_766335_768296_768483_775954
transcript_85988.known	chr20	-	1001	2	FSM	ENSG00000101276.18	ENST00000675466.1	1001	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGGGCGCCTGTAGTC	-1	True	NA	NA	False	AATAAA	-24	NA	775983	767510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_768483_775954
transcript_85989.nnic	chr20	+	825	3	Antisense	novelGene_ENSG00000101282.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGAGAAGGTTTGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	945014	997827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_945280_983801_983880_997345
transcript_85991.nnic	chr20	+	779	2	Antisense	novelGene_ENSG00000101282.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGAGAAGGTTTGCTCC	NA	False	NA	NA	False	AATAAA	-17	NA	944982	997827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_945280_997345
transcript_85993.known	chr20	+	8154	7	FSM	ENSG00000125818.18	ENST00000335877.11	8154	7	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_3	36.3581719379106	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGAGTTTTGACTCT	-30	True	NA	NA	False	ATTAAA	-23	NA	1118601	1172246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1165028
transcript_85994.known	chr20	+	2042	7	FSM	ENSG00000125818.18	ENST00000246015.8	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	221.234415646993	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTTTTAAATAGCAGC	-34	True	NA	22	True	AATAAA	-24	NA	1118597	1167328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1166226
transcript_86001.known	chr20	-	209	2	FSM	ENSG00000286787.2	ENST00000620712.2	294	2	26	59	17	-59	multi-exon	FALSE	canonical	2	4	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTTCATGAAATCCACT	16	True	NA	NA	False	NA	NA	NA	1118450	1117846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1117989_1118383
transcript_86004.known	chr20	-	1404	9	FSM	ENSG00000125775.15	ENST00000339987.7	1404	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	16.8369942388777	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	3313	False	NA	NA	False	AATAAA	-20	NA	1325869	1309974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339_1313499_1318317_1318419_1319589_1319660_1320362_1320436_1325829
transcript_86006.known	chr20	-	1591	6	FSM	ENSG00000088832.18	ENST00000678136.1	1591	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1517.68705601649	3283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTCTGTGTCATGGT	1	True	NA	-15	True	AATAAA	-20	NA	1393054	1368982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1377429_1377512_1392833_1392882_1392961
transcript_86007.known	chr20	-	1261	5	FSM	ENSG00000125775.15	ENST00000381808.7	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	4.60298815988049	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	18	False	NA	NA	False	AATAAA	-20	NA	1313639	1309974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339
transcript_8601.known	chr1	-	7326	12	FSM	ENSG00000143061.18	ENST00000369483.5	7326	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	32.653199000384	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTACTGCAGTCTTCTA	48	False	NA	-6	True	AGTAAA	-24	NA	116667755	116574398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116606491_116606552_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
transcript_86011.known	chr20	-	1514	5	FSM	ENSG00000088832.18	ENST00000400137.9	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_4	275.022726333661	3824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	1	True	NA	-10	True	AATAAA	-25	NA	1393054	1368977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_86019.known	chr20	-	1520	4	FSM	ENSG00000088832.18	ENST00000439640.5	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1535.41315467712	3318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-2	True	NA	-10	True	AATAAA	-25	NA	1393108	1368977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392961
transcript_8602.nnic	chr1	+	709	2	Antisense	novelGene_ENSG00000231072.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCACTTGTGTCATTC	NA	False	NA	NA	False	ATTAAA	-14	NA	116712621	116720954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_116712798_116720421
transcript_86020.known	chr20	-	1452	4	FSM	ENSG00000088832.18	ENST00000618612.5	1452	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	1279.05772608849	3321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	1	True	NA	-10	True	AATAAA	-25	NA	1393105	1368977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1392833_1392882_1392961
transcript_86021.known	chr20	-	3564	4	FSM	ENSG00000088832.18	ENST00000381719.8	3564	4	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_3	317.058354250444	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTATGCCGGCTTTTCT	-17	True	NA	-32	True	AATAAA	-3	NA	1393123	1368999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1372241_1375490_1375604_1392833_1392882_1392961
transcript_86022.known	chr20	+	413	3	FSM	ENSG00000234684.8	ENST00000665859.2	438	3	21	4	0	-4	multi-exon	FALSE	canonical	3	9	junction_1	3	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTATCTGAATTGATC	8	True	NA	-1	True	AATAAA	-14	NA	1325420	1359859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1325530_1350338_1350482_1359698
transcript_86023.known	chr20	+	808	3	FSM	ENSG00000234684.8	ENST00000607947.1	808	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCGCACCACTTTGCA	6	True	NA	NA	False	NA	NA	NA	1325418	1361631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1325530_1359698_1359821_1361056
transcript_86027.known	chr20	-	1579	4	FSM	ENSG00000088832.18	ENST00000677937.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	3121	junction_1	127.917508140555	3380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGTGGTTAT	-5	True	NA	-9	True	AATAAA	-26	NA	1393038	1368976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833
transcript_86028.known	chr20	-	2588	8	FSM	ENSG00000088833.18	ENST00000555944.5	2588	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	438.526428589462	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	5	True	NA	0	True	ATTAAA	-22	NA	1466905	1442161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455038_1458199_1458275_1466719
transcript_86032.known	chr20	-	2721	9	FSM	ENSG00000088833.18	ENST00000216879.9	2721	9	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_6	98.8316118456033	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTGTACTTTCTAA	-10	True	NA	-4	True	ATTAAA	-18	NA	1466849	1442165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_86033.known	chr20	-	1039	3	FSM	ENSG00000286288.1	ENST00000666681.1	1039	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCTCCGTTGAGTCTGT	NA	False	NA	NA	False	AATAAA	-16	NA	1811116	1805883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1806800_1810553_1810675_1811114
transcript_86035.known	chr20	-	807	4	FSM	ENSG00000101327.9	ENST00000651882.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.09120616516523	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTCTGAGCAAGAGCC	398	False	NA	NA	False	NA	NA	NA	1994285	1980731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1980959_1982955_1983101_1992583_1992644_1993910
transcript_86036.known	chr20	+	536	2	FSM	ENSG00000226644.5	ENST00000411839.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	NA	False	NA	5	True	ATTAAA	-14	NA	2207226	2213151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2207520_2212908
transcript_86037.known	chr20	+	415	2	FSM	ENSG00000226644.5	ENST00000447956.5	415	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	NA	False	NA	5	True	ATTAAA	-14	NA	2207216	2213151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2207389_2212908
transcript_86038.known	chr20	-	715	1	FSM	ENSG00000287561.1	ENST00000658070.1	715	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCACATGCAATTTTAA	3846	False	NA	NA	False	AGTAAA	-13	NA	2207397	2206682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2206700_2207400
transcript_8607.known	chr1	+	9439	23	FSM	ENSG00000116830.12	ENST00000369466.9	9439	23	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_9	27.2816652020793	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAAATCAGATTCATTA	-5	True	NA	43	True	AATAAA	-22	NA	117060325	117107453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379
transcript_86078.known	chr20	-	819	6	FSM	ENSG00000088876.13	ENST00000381253.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.15641851380768	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGTTGATAAATGTTAT	1	True	NA	NA	False	AATAAA	-23	NA	2508915	2491840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2492085_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_86083.known	chr20	-	642	5	FSM	ENSG00000088876.13	ENST00000421216.1	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	5.1234753829798	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGCTGTGTTCTTTCCT	15	True	NA	NA	False	NA	NA	NA	2508901	2492698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508799
transcript_86092.known	chr20	-	1082	7	FSM	ENSG00000125835.20	ENST00000381342.7	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	3152	junction_1	710.912422329377	33858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCACCTATGGATCTT	-10	True	NA	NA	False	AATAAA	-18	NA	2470789	2461641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_86093.known	chr20	-	1008	7	FSM	ENSG00000125835.20	ENST00000438552.6	1008	7	0	0	0	0	multi-exon	FALSE	canonical	3	1756	junction_1	1201.42869812015	20926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGATCTTTATTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	2470853	2461633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_86094.known	chr20	-	985	8	FSM	ENSG00000125835.20	ENST00000474384.2	985	8	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	2220.23251218499	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTTAAGAGAACATTATA	88	False	NA	NA	False	NA	NA	NA	2470732	2461659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467191_2467316_2467606_2467759_2470687
transcript_86095.known	chr20	-	3415	6	FSM	ENSG00000088876.13	ENST00000278772.9	3415	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	4.95580467734555	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAACTTGTTTTATTTT	1	True	NA	NA	False	AATAAA	-31	NA	2508915	2481816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2484657_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_86096.known	chr20	-	773	6	FSM	ENSG00000088876.13	ENST00000674000.1	773	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	9.01997782702374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAAATCTGGGTTGATA	-6	True	NA	NA	False	AATAAA	-15	NA	2508922	2491848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2492080_2492698_2492786_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_86102.known	chr20	+	837	5	FSM	ENSG00000101361.17	ENST00000460258.5	837	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	220.296816817674	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTGCAGAGCCTGGCAA	30	False	NA	NA	False	NA	NA	NA	2653000	2655512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2653174_2653278_2653394_2654413_2654576_2654748_2654948_2655324
transcript_86103.known	chr20	+	1913	12	FSM	ENSG00000101361.17	ENST00000329276.10	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	184.132587874486	2713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	-1	True	NA	14	True	AATAAA	-16	NA	2652631	2658393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_86104.known	chr20	+	1143	5	FSM	ENSG00000101361.17	ENST00000492135.5	1143	5	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	219.193265179385	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	1731	False	NA	14	True	AATAAA	-16	NA	2655945	2658393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_86105.known	chr20	+	1094	6	FSM	ENSG00000101361.17	ENST00000466447.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	357.072205583128	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	10	False	NA	14	True	AATAAA	-16	NA	2656110	2658393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
transcript_86106.known	chr20	+	859	3	FSM	ENSG00000101361.17	ENST00000462630.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_1	24	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	15	False	NA	14	True	AATAAA	-16	NA	2656639	2658393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2656896_2657080_2657219_2657928
transcript_86107.known	chr20	+	735	2	FSM	ENSG00000101361.17	ENST00000467857.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	932	junction_1	0	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	8	False	NA	14	True	AATAAA	-16	NA	2656948	2658393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2657219_2657928
transcript_86108.known	chr20	+	1320	8	FSM	ENSG00000101361.17	ENST00000467196.5	1320	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	305.934366710727	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	1221	False	NA	14	True	AATAAA	-16	NA	2655435	2658393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
transcript_86113.known	chr20	-	1542	12	FSM	ENSG00000101365.21	ENST00000380843.9	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	73.2316600457606	5523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-11	True	NA	-6	True	AATAAA	-14	NA	2664216	2658394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_86114.known	chr20	-	1279	13	FSM	ENSG00000101365.21	ENST00000474315.5	1279	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	222.971597593356	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	16	True	NA	-6	True	AATAAA	-14	NA	2664189	2658394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2658523_2658758_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_86115.known	chr20	-	1230	12	FSM	ENSG00000101365.21	ENST00000380851.9	1230	12	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	185.810487298437	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-14	True	NA	-6	True	AATAAA	-14	NA	2664219	2658394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2658523_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_86116.known	chr20	-	677	6	FSM	ENSG00000101365.21	ENST00000466494.6	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	278.883057929305	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	3897	False	NA	-6	True	AATAAA	-14	NA	2660308	2658394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2658523_2658637_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262
transcript_86117.known	chr20	-	2376	14	FSM	ENSG00000088882.8	ENST00000380605.3	2376	14	0	0	0	0	multi-exon	TRUE	canonical	3	325	junction_6	44.4608730320181	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCATCTTCGTGTTGTCTC	-11	True	NA	-7	True	ATTAAA	-17	NA	2800627	2794073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2794432_2794536_2794640_2795276_2795417_2795598_2795897_2795981_2796162_2796246_2796444_2796526_2796651_2797005_2797095_2797191_2797343_2797967_2798059_2798151_2798292_2798427_2798538_2798725_2798894_2800400
transcript_86118.known	chr20	+	2708	24	FSM	ENSG00000215305.10	ENST00000380445.8	2708	24	0	0	0	0	multi-exon	TRUE	canonical	3	128	junction_19	16.0749661543035	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2	True	NA	22	True	AATAAA	-15	NA	2840744	2866732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_8612.nic	chr1	+	1542	6	ISM	ENSG00000116830.12	ENST00000369466.9	9439	23	-36	31064	-36	0	5prime_fragment	FALSE	canonical	3	234	junction_5	21.3297913726318	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCATTTTATTATCTG	NA	False	NA	NA	False	AATAAA	-20	NA	117060289	117076389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179
transcript_86121.nnic	chr20	+	2623	23	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_11	34.961401384625	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	-9	True	NA	22	True	AATAAA	-15	NA	2840697	2866732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_86127.known	chr20	+	2318	20	FSM	ENSG00000215305.10	ENST00000380469.7	2318	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	38.5056027149714	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	-4	True	NA	22	True	AATAAA	-15	NA	2840702	2866732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_8613.known	chr1	+	849	5	FSM	ENSG00000116830.12	ENST00000470935.1	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	115.4585964751	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGGAGGCTAAAGAAACAA	3	True	NA	NA	False	NA	NA	NA	117060361	117075444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117060375_117060454_117060562_117062386_117062474_117073660_117073728_117074869
transcript_86132.known	chr20	-	1706	8	FSM	ENSG00000132635.17	ENST00000356872.7	1706	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	22.2508885399286	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	NA	False	NA	0	True	AATAAA	-25	NA	2841190	2835313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2838930_2839191_2839272_2839788_2839934_2840865
transcript_86134.nnic	chr20	+	507	2	NNC	ENSG00000215305.10	novel	819	9	NA	NA	-3	-18581	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAATGATTTCAACTT	-7	True	NA	2	True	ATTAAA	-15	NA	2840699	2843512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_2840828_2843133
transcript_86135.known	chr20	+	708	2	FSM	ENSG00000215305.10	ENST00000466415.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	1704	False	NA	22	True	AATAAA	-15	NA	2865910	2866732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2866316_2866429
transcript_86137.known	chr20	+	404	4	FSM	ENSG00000125787.11	ENST00000359100.6	404	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTGCGTCGAGTTCTGT	-2	True	NA	NA	False	AATAAA	-18	NA	3043621	3045747	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3043666_3044407_3044569_3044699_3044837_3045685
transcript_86138.known	chr20	+	1016	4	FSM	ENSG00000125901.6	ENST00000380325.4	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	1310	junction_3	86.7653284568336	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	-8	True	NA	31	True	AATAAA	-17	NA	3046051	3048250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3046281_3046372_3046520_3046613_3046738_3047734
transcript_86140.nic	chr20	+	882	3	NIC	ENSG00000125901.6	novel	1016	4	NA	NA	226	0	intron_retention	FALSE	canonical	3	1310	junction_2	23.5	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	218	False	NA	31	True	AATAAA	-17	NA	3046277	3048250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_3046520_3046613_3046738_3047734
transcript_86142.known	chr20	-	4300	5	FSM	ENSG00000185019.17	ENST00000217173.7	4300	5	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_1	27.6676706645138	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	5	True	NA	-4	True	AATAAA	-17	NA	3159865	3107572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3110315_3115304_3115467_3121383_3122585_3123311_3123407_3159765
transcript_86143.known	chr20	-	4469	4	FSM	ENSG00000185019.17	ENST00000348031.6	4469	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.1058061754523	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	8107	False	NA	-4	True	AATAAA	-17	NA	3160196	3107572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3110315_3121383_3122585_3123311_3123407_3159765
transcript_86146.nnic	chr20	-	2900	3	FSM	ENSG00000215251.5	ENST00000692371.1	2822	3	-78	0	-8	0	multi-exon	FALSE	canonical	2	10	junction_2	3.5	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTCCTTGTTGGATTTT	-3	True	NA	-4	True	AATAAA	-25	NA	3159873	3146522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3149261_3156072_3156127_3159765
transcript_86147.known	chr20	-	2842	2	FSM	ENSG00000215251.5	ENST00000380266.4	2842	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTTGGATTTTTCTT	5	True	NA	0	True	AATAAA	-29	NA	3159865	3146518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3149261_3159765
transcript_8615.nic	chr1	-	1947	8	NIC	ENSG00000134253.10	novel	3536	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	47.9012589839234	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-20	True	NA	-19	True	AATAAA	-22	NA	117121746	117111059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_117111213_117112094_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_86150.known	chr20	-	1303	9	FSM	ENSG00000198171.13	ENST00000354488.8	1303	9	0	0	0	0	multi-exon	FALSE	canonical	2	307	junction_6	51.2219435398541	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-17	True	NA	0	True	AAGAAA	-20	NA	3204682	3190349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
transcript_86155.known	chr20	-	1128	7	FSM	ENSG00000198171.13	ENST00000380201.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	2	307	junction_4	51.5355864104278	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCAGGGCCCAGGACCA	-20	True	NA	NA	False	NA	NA	NA	3204685	3191423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
transcript_86164.known	chr20	+	729	8	FSM	ENSG00000125877.13	ENST00000455664.6	729	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	276.856332005299	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGCTCTGAGAAACTC	12	True	NA	NA	False	NA	NA	NA	3209512	3223618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209567_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_86169.known	chr20	+	1028	7	FSM	ENSG00000125877.13	ENST00000483354.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	393.093182337216	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	192	False	NA	31	True	AATAAA	-31	NA	3208867	3223870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209034_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_8617.nic	chr1	-	2655	7	NIC	ENSG00000134253.10	novel	3536	6	NA	NA	-1	0	intron_retention	FALSE	canonical	3	19	junction_1	39.2573418469576	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-24	True	NA	-19	True	AATAAA	-22	NA	117121750	117111059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_117111213_117112094_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_86171.known	chr20	+	977	7	FSM	ENSG00000125877.13	ENST00000490838.6	977	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	309.358700468494	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	-12	True	NA	31	True	AATAAA	-31	NA	3209488	3223870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209536_3213257_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_86175.known	chr20	+	897	6	FSM	ENSG00000125877.13	ENST00000399838.3	897	6	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_1	308.191239330387	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	24	True	NA	31	True	AATAAA	-31	NA	3209524	3223870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209618_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_86182.known	chr20	+	1037	8	FSM	ENSG00000125877.13	ENST00000380113.8	1037	8	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_2	91.8079183815373	4897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	-3	True	NA	21	True	AATAAA	-21	NA	3209497	3223860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209618_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_86183.known	chr20	+	967	7	FSM	ENSG00000125877.13	ENST00000460550.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	306.52768589839	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	12	True	NA	31	True	AATAAA	-31	NA	3209512	3223870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209618_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_86184.known	chr20	+	670	2	FSM	ENSG00000125877.13	ENST00000472295.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	941	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	NA	False	NA	31	True	AATAAA	-31	NA	3221752	3223870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3221918_3223365
transcript_86187.known	chr20	-	3229	20	FSM	ENSG00000088836.14	ENST00000380059.7	3229	20	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_19	25.4446332824996	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCACCTGTGTCCCTGC	1392	False	NA	-6	True	AATAAA	-22	NA	3238166	3227416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3237892
transcript_86188.known	chr20	-	3046	20	FSM	ENSG00000088836.14	ENST00000642402.1	3046	20	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_19	18.8637041744207	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	14	True	NA	-11	True	AATAAA	-17	NA	3239190	3227421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_8619.nic	chr1	-	1708	7	NIC	ENSG00000134253.10	novel	2415	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	42.3425186885344	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTTCAAGTGCTCTTT	-24	True	NA	-9	True	ATTAAA	-22	NA	117121750	117112184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713_117120902_117121605
transcript_86190.nic	chr20	-	1026	3	ISM	ENSG00000149451.19	ENST00000350009.6	3480	21	-4	8452	-4	-8451	5prime_fragment	FALSE	canonical	3	15	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAAGAAA	556	False	NA	NA	False	AAAAAG	-22	NA	3682135	3676425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_3677144_3679491_3679572_3681907
transcript_86191.nic	chr20	-	606	2	ISM	ENSG00000149451.19	ENST00000350009.6	3480	21	53	11163	53	-11162	5prime_fragment	FALSE	canonical	3	22	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACCAAAAAGAAAACCTTT	613	False	NA	NA	False	NA	NA	NA	3682078	3679136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_3679572_3681907
transcript_86204.known	chr20	-	1252	6	FSM	ENSG00000101220.18	ENST00000379772.4	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	42.3065006825192	4619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-15	True	NA	-4	True	AATAAA	-19	NA	3767753	3753507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
transcript_86205.known	chr20	-	1302	6	FSM	ENSG00000101220.18	ENST00000217195.12	1302	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	469.044731342332	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	10	True	NA	-4	True	AATAAA	-19	NA	3767728	3753507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760006_3760187_3767662
transcript_86206.known	chr20	+	1960	16	FSM	ENSG00000101224.18	ENST00000467519.5	1960	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	21.0664556951461	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTTTCCTTGTTA	-53	True	NA	24	True	NA	NA	NA	3795738	3805237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3795880_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_86210.known	chr20	+	1791	3	FSM	ENSG00000125843.11	ENST00000379567.6	1791	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTCTGTGAGTTTGA	-3	True	NA	30	True	ATTAAA	-22	NA	3820535	3825302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3820703_3822101_3822294_3823870
transcript_86211.known	chr20	+	5372	3	FSM	ENSG00000125843.11	ENST00000615891.2	5372	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACAGGTTTTTGTG	8	True	NA	NA	False	AATACA	-14	NA	3820546	3828838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3820759_3822101_3822294_3823870
transcript_86214.known	chr20	+	584	3	FSM	ENSG00000125843.11	ENST00000455742.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCGCTGCACGAGGCCC	8	True	NA	NA	False	NA	NA	NA	3820546	3823954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3820855_3822101_3822294_3823870
transcript_86219.nnic	chr20	+	1817	7	NNC	ENSG00000088888.18	novel	11731	7	NA	NA	-7	-5468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	30.6902083552538	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-23	True	NA	NA	False	NA	NA	NA	3846826	3870650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864522_3869868
transcript_8622.known	chr1	-	3536	6	FSM	ENSG00000134253.10	ENST00000256649.9	3536	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	17.5202739704606	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-23	True	NA	-19	True	AATAAA	-22	NA	117121749	117111059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_86220.known	chr20	+	11731	7	FSM	ENSG00000088888.18	ENST00000428216.4	11731	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	9.92331709773613	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATAATGGTCTAC	-16	True	NA	11	True	AATAAA	-23	NA	3846833	3876118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_86224.known	chr20	+	11596	6	FSM	ENSG00000088888.18	ENST00000416600.6	11596	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	28.6956442687736	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAATGGTCTACAATGG	NA	False	NA	16	True	AATAAA	-28	NA	3846798	3876123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3846904_3854557_3854742_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_8624.known	chr1	+	424	3	FSM	ENSG00000235202.2	ENST00000664471.1	424	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGGGTCTTTGGGTCTT	NA	False	NA	NA	False	AATAAA	-13	NA	117272181	117321330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117272285_117296519_117296634_117321123
transcript_86240.known	chr20	+	4815	7	FSM	ENSG00000125779.24	ENST00000497424.5	4815	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	121.079404616236	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCGCTATTTCAGGTCA	56	False	NA	NA	False	NA	NA	NA	3888838	3926958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3888905_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_86246.known	chr20	+	1843	7	FSM	ENSG00000125779.24	ENST00000336066.8	1843	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	123.402345556674	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	-13	True	NA	-31	True	NA	NA	NA	3889388	3923855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3889729_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_8625.known	chr1	+	8576	13	FSM	ENSG00000198162.12	ENST00000356554.7	8576	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	6.88547182277455	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTTTAGCCTTCATT	-19	True	NA	14	True	AATAAA	-20	NA	117367448	117528872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117368486_117402185_117402442_117405548_117405646_117414712_117414832_117420568_117420650_117442230_117442326_117460488_117460613_117466333_117466428_117493146_117493263_117496762_117496983_117499381_117499555_117502854_117502971_117522824
transcript_86251.known	chr20	+	1763	7	FSM	ENSG00000125779.24	ENST00000621507.1	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	119.609666090255	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	0	True	NA	-31	True	NA	NA	NA	3889815	3923855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3889933_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_86255.known	chr20	-	1128	7	FSM	ENSG00000101236.17	ENST00000545616.2	1128	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	36.3199516641871	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTATGCCTTTGATAAG	13	True	NA	3	True	NA	NA	NA	4015545	3933566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_3974331_3974401_4015436
transcript_8626.known	chr1	+	487	3	FSM	ENSG00000198162.12	ENST00000422329.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	39.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCAGTGTCATGTTTTA	NA	False	NA	16	True	ATTAAA	-16	NA	117502860	117525352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117502971_117522824_117522938_117525088
transcript_86269.known	chr20	-	441	2	FSM	ENSG00000229539.1	ENST00000451507.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGAGTGCCTCCCTG	543	False	NA	NA	False	AATAAA	-4	NA	3888868	3888238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3888550_3888738
transcript_86271.known	chr20	+	2164	7	FSM	ENSG00000088826.18	ENST00000305958.9	2164	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	16.8226038412607	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	1	True	NA	24	True	AATAAA	-25	NA	4148827	4187727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4187269
transcript_86272.known	chr20	+	2322	8	FSM	ENSG00000088826.18	ENST00000621355.4	2322	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	50.1874038998241	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCTGTGTATGTGTGTG	NA	False	NA	43	True	AATAAA	-44	NA	4148778	4187746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4186742_4186833_4187269
transcript_86273.known	chr20	+	2429	2	FSM	ENSG00000171867.18	ENST00000424424.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	2	True	NA	11	True	ATTAAA	-22	NA	4686458	4701590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4686513_4699215
transcript_86274.known	chr20	+	2435	2	FSM	ENSG00000171867.18	ENST00000379440.9	2435	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	-1	True	NA	9	True	ATTAAA	-20	NA	4686455	4701588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4686513_4699210
transcript_86275.known	chr20	+	2574	2	FSM	ENSG00000171867.18	ENST00000457586.2	2574	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	86	False	NA	11	True	ATTAAA	-22	NA	4686542	4701590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4686737_4699210
transcript_86276.known	chr20	+	3981	2	FSM	ENSG00000171864.5	ENST00000305817.3	3981	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCAGTCTGGTACTTCT	-2	True	NA	5	True	AATAAA	-18	NA	4721908	4728460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4721970_4724540
transcript_86277.known	chr20	-	5390	12	FSM	ENSG00000101265.16	ENST00000379400.8	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	10.0008264121331	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCCGTGGATGGGTCT	14	True	NA	-11	True	AATAAA	-17	NA	4823608	4780022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823556
transcript_86288.known	chr20	-	1541	5	FSM	ENSG00000089063.15	ENST00000342308.10	1541	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	625.230757400818	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	13	True	NA	-22	True	AATAAA	-19	NA	5113076	5099849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112960
transcript_86298.known	chr20	-	1642	4	FSM	ENSG00000089063.15	ENST00000379299.6	1642	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	514.20445566158	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-3	True	NA	-12	True	AATAAA	-29	NA	5113042	5099839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112729
transcript_86309.known	chr20	-	1472	4	FSM	ENSG00000089063.15	ENST00000202834.11	1472	4	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_3	102.303470126873	4675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	6880	False	5113116	-12	True	AATAAA	-29	NA	5113103	5099839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112960
transcript_8631.nic	chr1	-	2250	15	NIC	ENSG00000196505.11	novel	8819	14	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	22.0500358646568	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATACAGAACCAATGT	NA	False	NA	-47	True	NA	NA	NA	117929685	117870183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_117870617_117877775_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_86310.known	chr20	-	1735	5	FSM	ENSG00000089063.15	ENST00000379286.6	1735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	629.261074594639	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-3	True	NA	-12	True	AATAAA	-29	NA	5113042	5099839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112742
transcript_86311.known	chr20	-	1536	5	FSM	ENSG00000089063.15	ENST00000379277.6	1536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	623.891216479283	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5	True	NA	-12	True	AATAAA	-29	NA	5112904	5099839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111763_5111809_5112742
transcript_86317.known	chr20	-	1276	6	FSM	ENSG00000132646.11	ENST00000379143.10	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_5	102.96989851408	6057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-3	True	NA	-4	True	AATAAA	-23	NA	5119958	5114952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
transcript_86318.known	chr20	-	1359	7	FSM	ENSG00000132646.11	ENST00000379160.3	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	379.653679906657	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	998	False	NA	-4	True	AATAAA	-23	NA	5126626	5114952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577_5119915_5126499
transcript_86320.known	chr20	+	9076	13	FSM	ENSG00000101290.14	ENST00000460006.6	9076	13	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_10	18.6703865341169	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGTGTGGTTTTCGAT	-17	True	NA	5	True	AATAAA	-17	NA	5127007	5197887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5127150_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
transcript_86329.nic	chr20	-	1682	2	ISM	ENSG00000101292.8	ENST00000678254.1	4446	3	207	13732	-15	-13659	5prime_fragment	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGACCTGTAGAACACTA	206	False	NA	NA	False	AATAAA	-22	NA	5316747	5312949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_5314378_5316493
transcript_8633.known	chr1	-	8819	14	FSM	ENSG00000196505.11	ENST00000369443.10	8819	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	12.4933118201975	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTCAACTTAGCATTA	-5	True	NA	-8	True	AGTAAA	-16	NA	117929621	117863484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_117870617_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_86330.known	chr20	-	5434	20	FSM	ENSG00000125772.14	ENST00000379019.7	5434	20	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_15	11.1365237244312	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGTTTCCTAACTCAGA	-1	True	NA	-12	True	AATAAA	-16	NA	5611006	5544438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5547851_5557944_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
transcript_86335.nic	chr20	+	739	4	NIC	ENSG00000171984.15	novel	627	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	14.1656862405839	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTATGAAGTATGCTG	NA	False	NA	6	True	AATAAA	-18	NA	5750375	5773447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_5750480_5756711_5756849_5772861_5773044_5773131
transcript_86336.known	chr20	+	585	3	FSM	ENSG00000171984.15	ENST00000378979.8	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	16	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTATGAAGTATGCTG	-3	True	NA	6	True	AATAAA	-18	NA	5750392	5773447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5750480_5772861_5773044_5773131
transcript_86337.known	chr20	+	1633	3	FSM	ENSG00000171984.15	ENST00000303142.11	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	13.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGCCCTACTTTCTCT	5	True	NA	NA	False	AATAAA	-15	NA	5750400	5864395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5750480_5772861_5773044_5863023
transcript_86341.known	chr20	+	2462	5	FSM	ENSG00000089199.10	ENST00000378961.9	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4.58257569495584	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGCTTCATTGTTC	0	True	NA	2	True	AATAAA	-13	NA	5911509	5925353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5911683_5916325_5916373_5916825_5916920_5922334_5924101_5924971
transcript_86346.known	chr20	-	2929	11	FSM	ENSG00000089195.15	ENST00000203001.7	2929	11	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	29.0199931082004	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-19	True	NA	NA	False	AATAAA	-14	NA	5950533	5937227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_86348.known	chr20	-	3025	11	FSM	ENSG00000089195.15	ENST00000473131.5	3025	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	94.9987368337074	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGGCACAGTGGCTCAT	-1	True	NA	NA	False	AATAAA	-7	NA	5950515	5937234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943826_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_86350.known	chr20	-	2239	10	FSM	ENSG00000089195.15	ENST00000453074.6	2239	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	98.7522151650281	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-44	True	NA	-4	True	ATTAAA	-21	NA	5950558	5937832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5946405_5946534_5950277
transcript_86358.nic	chr20	-	651	4	ISM	ENSG00000089195.15	ENST00000466974.5	2976	9	-120	6328	-39	-1486	5prime_fragment	FALSE	canonical	3	290	junction_1	36.790699307781	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGTTTTTATTTTAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	5950597	5944160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_5944254_5944804_5944915_5946405_5946534_5950277
transcript_86363.known	chr20	+	3769	19	FSM	ENSG00000125885.13	ENST00000378896.7	3769	19	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	10.7731949019342	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATTTAATAATAGGTCTC	-12	True	NA	NA	False	CATAAA	-45	NA	5950651	5995206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5951078_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
transcript_86364.known	chr20	+	7486	19	FSM	ENSG00000125885.13	ENST00000610722.4	7486	19	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	10.9645894689324	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTTAAAACAAAAACTGAGC	-12	True	NA	NA	False	ATTAAA	-15	NA	5950651	5998977	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5951024_5952010_5952164_5952423_5952529_5954607_5954691_5955101_5955252_5957125_5957230_5958527_5958727_5963273_5963360_5967435_5967588_5967829_5968026_5972006_5972038_5973055_5973197_5977875_5978018_5982969_5983166_5984780_5985001_5985921_5986132_5987281_5987359_5993505_5993696_5994298
transcript_86368.known	chr20	+	524	1	FSM	ENSG00000275632.1	ENST00000619201.1	524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTACTGGTTTAATTT	NA	False	NA	14	True	AATAAA	-14	NA	6000417	6000941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_6000400_6000900
transcript_86369.known	chr20	+	3925	7	FSM	ENSG00000088766.12	ENST00000378863.9	3925	7	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	80.0112839264285	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAAATATGGCTCTAAT	2	True	NA	NA	False	AATAAA	-22	NA	6006122	6040053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_86371.known	chr20	-	4637	15	FSM	ENSG00000101311.16	ENST00000217289.9	4637	15	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_14	5.43420760046007	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGGTCCTGTTGTGTCCT	24	True	NA	-7	True	AGTAAA	-19	NA	6123030	6074844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_6077347_6079435_6079578_6084039_6084165_6085065_6085288_6087776_6087884_6088964_6089090_6094938_6094989_6096901_6097034_6097523_6097632_6107531_6107635_6110297_6110512_6112476_6112624_6115810_6116045_6119403_6119573_6122773
transcript_86375.nnic	chr20	-	809	4	Antisense	novelGene_ENSG00000125845.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCTCCAGAGACTGATT	NA	False	NA	NA	False	AATAAA	-16	NA	6768205	6765589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_6765670_6765851_6766009_6766399_6766806_6768039
transcript_86377.known	chr20	+	3545	3	FSM	ENSG00000125845.7	ENST00000378827.5	3545	3	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_2	5	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCATTCTATAAAGTCCAA	-6	True	NA	13	True	AATAAA	-17	NA	6767685	6780246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_6768876_6770119_6770473_6778244
transcript_86378.nic	chr20	-	463	2	ISM	ENSG00000228888.1	ENST00000449581.1	874	8	106869	-126	106869	126	3prime_fragment	FALSE	canonical	3	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTTAGAAGACAGTTAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	7147333	7146340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_7146648_7147177
transcript_86379.known	chr20	-	874	8	FSM	ENSG00000228888.1	ENST00000449581.1	874	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.79941684889506	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGATGTTGCTGTTGT	4076	False	NA	NA	False	NA	NA	NA	7254202	7146466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_7146648_7147177_7147374_7148000_7148200_7183342_7183394_7188484_7188568_7241828_7241877_7249808_7249850_7254127
transcript_8638.known	chr1	-	2436	13	FSM	ENSG00000196505.11	ENST00000369442.3	2436	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	10.2537256101814	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTAACATTTCTCT	-13	True	NA	2	True	AATAAA	-16	NA	117929583	117877221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_86381.known	chr20	-	6103	8	FSM	ENSG00000125827.9	ENST00000246024.7	6103	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	14.4207899809084	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTTCATTCATTC	-3	True	NA	1	True	NA	NA	NA	8019761	7977345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_7982622_7983793_7983858_7987287_7987390_7996025_7996072_7999731_7999861_8001495_8001542_8010199_8010316_8019437
transcript_86386.nic	chr20	+	643	6	NIC	ENSG00000182621.18	novel	560	6	NA	NA	-122	-493	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	8.97997772825746	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTATTGCTTTTTTGTT	NA	False	NA	8	True	AATAAA	-14	NA	8600592	8651518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_8600782_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8651412
transcript_86387.nic	chr20	+	2350	6	NIC	ENSG00000182621.18	novel	560	6	NA	NA	-52	-236	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	8.97997772825746	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGTGTGTAACTTATTA	NA	False	NA	13	True	AATAAA	-14	NA	8600662	8653295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_8600782_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8651412
transcript_86394.known	chr20	+	1810	6	FSM	ENSG00000125869.10	ENST00000246070.3	1810	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.0591260281974	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCTGCTTTCTTGAAA	4	True	NA	NA	False	AATAAA	-18	NA	9514589	9530524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_9514917_9515452_9515626_9515999_9516132_9516255_9516362_9518039_9518229_9529641
transcript_86397.known	chr20	+	5303	10	FSM	ENSG00000132623.16	ENST00000378380.4	5303	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	13.3869293171814	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	-26	True	NA	14	True	AATACA	-20	NA	10035048	10058303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
transcript_86401.nic	chr20	+	1534	4	ISM	ENSG00000132623.16	ENST00000378380.4	5303	10	1	13250	1	1837	5prime_fragment	FALSE	canonical	3	66	junction_3	2.62466929133727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAATTTCATCTGAAAT	-25	True	NA	NA	False	AATAAA	-18	NA	10035049	10045053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393
transcript_86402.nic	chr20	+	1052	3	ISM	ENSG00000132623.16	ENST00000378392.6	5429	11	74	19331	12	-4244	5prime_fragment	FALSE	canonical	3	12	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	-14	True	NA	NA	False	TATAAA	-25	NA	10035060	10038972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_10035334_10035578_10035643_10038257
transcript_86403.nic	chr20	+	1054	2	ISM	ENSG00000132623.16	ENST00000488991.1	2805	11	-122	16855	8	-4244	5prime_fragment	FALSE	canonical	3	72	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	-1	True	NA	NA	False	TATAAA	-25	NA	10034994	10038972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_10035334_10038257
transcript_86405.known	chr20	-	6181	7	FSM	ENSG00000125863.20	ENST00000651692.1	6181	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	350.231669359329	731	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCATCACATACATTA	-18	True	NA	NA	False	AATAAA	-9	NA	10434214	10401620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10413932_10420527_10420759_10428729_10428817_10434107
transcript_86422.known	chr20	+	6056	8	FSM	ENSG00000149346.15	ENST00000334534.10	6056	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	6.1145527311522	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTATCACTTCTGT	-19	True	NA	5	True	AGTAAA	-15	NA	10435304	10628030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10621313_10621415_10622658
transcript_86426.nnic	chr20	+	1295	7	NIC	ENSG00000149346.15	novel	6056	8	NA	NA	-13	-4673	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	7.43303437365925	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACGAAAGAGGCCATT	-32	True	NA	NA	False	AAGAAA	-6	NA	10435291	10623357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10622658
transcript_86427.nnic	chr20	+	824	7	NNC	ENSG00000149346.15	novel	6056	8	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	6.15539510420646	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATCACTTCTGTTCTT	-17	True	NA	9	True	AGTAAA	-19	NA	10435306	10628034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10627791
transcript_86428.nnic	chr20	+	730	7	NNC	ENSG00000149346.15	novel	6056	8	NA	NA	0	-2350	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	6.3879226322456	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGGCATCTGCGTTT	-19	True	NA	3	True	TTTAAA	-19	NA	10435304	10634479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10634332
transcript_86431.nnic	chr20	+	1323	7	NIC	ENSG00000149346.15	novel	6056	8	NA	NA	-30	-4673	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8.11206234909197	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACGAAAGAGGCCATT	595	False	NA	NA	False	AAGAAA	-6	NA	10435274	10623357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_10435454_10458175_10458232_10560699_10560821_10598674_10598753_10601730_10601820_10621313_10621415_10622658
transcript_86434.nic	chr20	+	910	6	ISM	ENSG00000149346.15	ENST00000334534.10	6056	8	2	25882	2	-25882	5prime_fragment	FALSE	canonical	2	10	junction_2	5.3665631459995	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTTTCCACTGGAGGC	-17	True	NA	NA	False	AATAAA	-32	NA	10435306	10602148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730
transcript_8644.known	chr1	+	10004	27	FSM	ENSG00000065183.16	ENST00000349139.6	10004	27	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_1	56.6259527134869	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCACTCGTGTAA	-23	True	NA	9	True	AATAAA	-24	NA	117929738	117966543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_86452.nic	chr20	+	2346	3	ISM	ENSG00000149346.15	ENST00000334534.10	6056	8	-14	69673	-14	-69673	5prime_fragment	FALSE	canonical	2	10	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAATTCGCTGATGTT	-33	True	NA	NA	False	NA	NA	NA	10435290	10558357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_10435454_10458175_10458232_10556230
transcript_86453.known	chr20	-	5940	26	FSM	ENSG00000101384.12	ENST00000254958.10	5940	26	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_17	10.985372092014	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTGTCGAGGTGAATTG	0	True	NA	-3	True	AATAAA	-20	NA	10673999	10637683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_10639956_10640782_10640934_10641112_10641245_10641459_10641694_10641782_10641893_10642487_10642602_10643777_10643864_10644356_10644385_10644862_10644980_10645142_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
transcript_86458.known	chr20	+	4826	6	FSM	ENSG00000132640.15	ENST00000399006.6	4826	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	138.452013347586	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	-15	True	NA	33	True	AATAAA	-28	NA	11890816	11926609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_11890955_11917777_11918012_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_86459.known	chr20	+	4686	5	FSM	ENSG00000132640.15	ENST00000254977.7	4686	5	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	25.9855729203726	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	NA	False	NA	33	True	AATAAA	-28	NA	11890722	11926609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_11890955_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_86460.known	chr20	+	5137	5	FSM	ENSG00000132640.15	ENST00000405977.5	5137	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	122.964171611084	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	-4	True	NA	33	True	AATAAA	-28	NA	11890827	11926609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_11890955_11917777_11918602_11919085_11919177_11919717_11919837_11922633
transcript_86461.known	chr20	+	3090	6	FSM	ENSG00000101230.6	ENST00000262487.5	3090	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.01980390271856	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTGCATCCTTCATTTA	-10	True	NA	NA	False	AATAAA	-17	NA	13221273	13300651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13221915_13270503_13270744_13279633_13279899_13288539_13288684_13292373_13292464_13298941
transcript_86464.known	chr20	-	2342	14	FSM	ENSG00000089123.16	ENST00000337743.9	2342	14	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	10.9414796225813	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGAGAGCTATTATTTA	-9	True	NA	-4	True	AATAAA	-18	NA	13638932	13389393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_86470.nic	chr20	-	3300	13	ISM	ENSG00000089123.16	ENST00000337743.9	2342	14	-14	26051	-14	19599	5prime_fragment	FALSE	canonical	3	73	junction_9	11.3685115804821	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACCCCAAAACAAAAAC	NA	False	NA	NA	False	NA	NA	NA	13638946	13415444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_86489.known	chr20	-	993	10	FSM	ENSG00000089123.16	ENST00000465381.5	993	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	31.0984101058416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGAGACATATACATT	20	False	NA	NA	False	NA	NA	NA	13638903	13435043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_86490.known	chr20	-	3188	14	FSM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_9	25.3115498579802	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGTATAGCACTGAT	-13	True	NA	-14	True	AATAAA	-18	NA	13784919	13714324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_86492.known	chr20	-	3216	14	FSM	ENSG00000089048.15	ENST00000202816.5	3216	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	90.65031323686	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATAGCACTGATTTA	20	True	NA	-11	True	AATAAA	-21	NA	13784886	13714321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784821
transcript_86499.nic	chr20	-	1981	9	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-116	45413	-116	-45413	5prime_fragment	FALSE	canonical	3	280	junction_4	22.8770490885516	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGCAAAGAAAATGATAT	NA	False	NA	89	True	AATACA	-36	NA	13785035	13759737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_86503.nic	chr20	-	1067	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-483	68315	-483	-68315	5prime_fragment	FALSE	canonical	3	303	junction_1	0	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAAAACATTGTTCA	NA	False	NA	NA	False	AAGAAA	-1	NA	13785402	13782639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_13783184_13784879
transcript_86504.nic	chr20	-	758	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-391	68532	-391	-68532	5prime_fragment	FALSE	canonical	3	303	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAAACCCAGACTA	NA	False	NA	NA	False	AATAAA	-1	NA	13785310	13782856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_13783184_13784879
transcript_86521.nic	chr20	+	1311	12	NIC	ENSG00000101247.18	novel	2409	12	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	51.8711053501652	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	NA	False	NA	10	True	AATAAA	-18	NA	13784931	13817228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_86526.known	chr20	+	2409	12	FSM	ENSG00000101247.18	ENST00000378081.9	2409	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	44.9109311363858	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTTTTGTTTTTTGG	NA	False	NA	NA	False	AGTAAA	-15	NA	13785006	13818421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_8653.nic	chr1	+	1030	9	ISM	ENSG00000065183.16	ENST00000349139.6	10004	27	-24	24755	-5	0	5prime_fragment	FALSE	canonical	3	176	junction_1	79.9201750185771	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAATTCAGAAGAA	NA	False	NA	-9	True	NA	NA	NA	117929714	117941788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749
transcript_86533.nic	chr20	+	1144	11	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_3	39.8473336623669	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	NA	False	NA	10	True	AATAAA	-18	NA	13785000	13817228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_86539.known	chr20	+	5449	11	FSM	ENSG00000101247.18	ENST00000378106.10	5449	11	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	24.9697817371318	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGTGTTTTAGAGTAA	-31	True	NA	NA	False	GATAAA	-15	NA	13785027	13821580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_86553.known	chr20	+	991	10	FSM	ENSG00000101247.18	ENST00000463598.1	991	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	56.4153468306691	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	-9	True	NA	10	True	AATAAA	-18	NA	13785049	13817228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_86558.known	chr20	+	933	10	FSM	ENSG00000101247.18	ENST00000475968.5	933	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	48.041905575841	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	29	True	NA	10	True	AATAAA	-18	NA	13785087	13817228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_8659.known	chr1	-	2787	6	FSM	ENSG00000116874.12	ENST00000235521.5	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	15.72768260107	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	-2	True	NA	-1	True	ACTAAA	-20	NA	119140653	119031215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_86591.known	chr20	+	1105	4	FSM	ENSG00000172264.18	ENST00000483997.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	6.68331255192114	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTATGGTGATTTCT	-2	True	NA	NA	False	AATAAA	-15	NA	13995501	14053679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13995810_14002287_14002405_14051921_14052021_14053098
transcript_86593.known	chr20	-	4776	2	FSM	ENSG00000125848.10	ENST00000378053.3	4776	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTGTGTTTTCCACAC	2	True	NA	NA	False	ATTAAA	-16	NA	14337608	14322987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_14327559_14337403
transcript_86596.known	chr20	-	617	2	FSM	ENSG00000125848.10	ENST00000462077.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAATTAAGCTACACAAA	-4	True	NA	-44	True	NA	NA	NA	14337614	14328921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_14329328_14337403
transcript_86597.known	chr20	+	494	1	FSM	ENSG00000213950.2	ENST00000430953.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGAGGGTTATTTTG	NA	False	NA	NA	False	NA	NA	NA	14757562	14758056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_14757600_14758100
transcript_866.nic	chr1	-	853	5	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-356	13870	-356	-7836	5prime_fragment	FALSE	canonical	3	78	junction_1	9.93415824315276	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCACGAACGTCGGAAA	NA	False	NA	17	True	AAAAAG	-4	NA	1659368	1649607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_86605.known	chr20	+	1588	7	FSM	ENSG00000125870.11	ENST00000377943.9	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	890	junction_1	396.736968560055	4291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTACTTCTTTGTAAT	NA	False	NA	20	True	AATAAA	-17	NA	16729960	16741776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_8661.known	chr1	-	2811	6	FSM	ENSG00000116874.12	ENST00000369426.9	2811	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	37.1591173199795	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	3	True	NA	-1	True	ACTAAA	-20	NA	119140648	119031215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_119033389_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_86611.nic	chr20	+	567	4	ISM	ENSG00000125870.11	ENST00000377943.9	1588	7	-113	4438	-113	-4438	5prime_fragment	FALSE	canonical	3	890	junction_1	510.962707923865	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGCCAAAAC	NA	False	NA	NA	False	AAGAAA	-9	NA	16729847	16737338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260
transcript_86616.known	chr20	+	1477	4	FSM	ENSG00000125879.5	ENST00000246081.3	1477	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTGAGTTTTTTCTAA	0	True	NA	NA	False	ATTAAA	-20	NA	16748357	16752164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_16748517_16748866_16749007_16749902_16750011_16751094
transcript_86617.known	chr20	+	4691	12	FSM	ENSG00000125851.10	ENST00000262545.7	4691	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	2.64418901313618	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGAGATGTGCTATAT	2	True	NA	NA	False	AATAAA	-18	NA	17227039	17484578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17227483_17260239_17260345_17358326_17358441_17360531_17360641_17369239_17369278_17409262_17409340_17429434_17429524_17436707_17436884_17453741_17453958_17456347_17456449_17465325_17465554_17481583
transcript_86625.known	chr20	+	465	1	FSM	ENSG00000232333.1	ENST00000457576.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGTATGAGTTAATAAA	NA	False	NA	NA	False	NA	NA	NA	17516842	17517307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17516800_17517300
transcript_86629.known	chr20	+	1853	5	FSM	ENSG00000125868.16	ENST00000474024.5	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1175.03986634497	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGTAATTTTCATG	-10	True	NA	29	True	AATAAA	-19	NA	17570081	17608242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17570212_17591931_17592064_17600737_17601046_17604554_17604632_17607036
transcript_86641.known	chr20	+	3405	4	FSM	ENSG00000125868.16	ENST00000246069.12	3405	4	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_3	189.506376321924	7718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGCTTGACTGTGAAGT	-17	True	NA	3	True	AATAAA	-20	NA	17570074	17609919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17570212_17600737_17601046_17604554_17604632_17607036
transcript_86642.known	chr20	+	795	5	FSM	ENSG00000125868.16	ENST00000449141.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1383.03585907958	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGGTCTCACTGAGG	-2	True	NA	11	True	AATAAA	-13	NA	17570089	17607222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17570212_17600737_17601046_17604554_17604632_17605109_17605212_17607036
transcript_86644.known	chr20	-	4737	23	FSM	ENSG00000125844.17	ENST00000246043.8	4737	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.857029119548	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGTCTCGTCTGGTCTT	NA	False	NA	-5	True	ATTAAA	-21	NA	17660507	17613677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595
transcript_86645.known	chr20	-	5049	25	FSM	ENSG00000125844.17	ENST00000377813.6	5049	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	163.157643604787	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGGTCTCGTCTGGTCT	9	True	NA	-6	True	ATTAAA	-20	NA	17682242	17613678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658595_17660529_17679998_17680076_17682027
transcript_86649.known	chr20	-	1191	2	FSM	ENSG00000125844.17	ENST00000398782.2	1191	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGAAGGGGCCCAGAACC	NA	False	NA	NA	False	GGGGCT	-18	NA	17682295	17659605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17660529_17682027
transcript_86654.nnic	chr20	-	1302	3	NIC	ENSG00000125850.11	novel	1263	4	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	37	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACATTGACCTACAGCT	1	True	NA	-16	True	AATAAA	-34	NA	18059211	18024162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_18024953_18041533_18041724_18058889
transcript_86655.known	chr20	-	990	3	FSM	ENSG00000125850.11	ENST00000494030.1	990	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	24	False	NA	-17	True	AATAAA	-18	NA	18059188	18024261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18024953_18041533_18041724_18059079
transcript_86659.nnic	chr20	-	1056	3	NIC	ENSG00000125850.11	novel	1263	4	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	37	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	148	False	NA	-17	True	AATAAA	-18	NA	18059064	18024261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_18024953_18041533_18041724_18058889
transcript_8666.known	chr1	-	621	5	FSM	ENSG00000116874.12	ENST00000495746.5	621	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	37.4057148040243	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGGCCACCGTCCGA	-3	True	NA	NA	False	NA	NA	NA	119140654	119033296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_119033360_119034094_119034214_119045581_119045663_119076349_119076608_119140554
transcript_86661.nnic	chr20	-	779	2	NNC	ENSG00000125850.11	novel	990	3	NA	NA	19502	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	NA	False	NA	-17	True	AATAAA	-18	NA	18031237	18024261	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_18024953_18031149
transcript_86667.known	chr20	-	602	2	FSM	ENSG00000089006.17	ENST00000486039.1	602	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAGATGATCTCTGGAGA	-3	True	NA	NA	False	NA	NA	NA	17968794	17968107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17968290_17968374
transcript_86668.known	chr20	-	2025	13	FSM	ENSG00000089006.17	ENST00000490175.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_12	191.521466739951	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-9	True	NA	-24	True	AATAAA	-20	NA	17968800	17941596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968699
transcript_86669.known	chr20	-	2288	14	FSM	ENSG00000089006.17	ENST00000377768.7	2288	14	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_13	125.901295047647	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	NA	False	NA	-24	True	AATAAA	-20	NA	17968980	17941596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374_17968458_17968699
transcript_86670.known	chr20	-	819	4	FSM	ENSG00000089006.17	ENST00000491090.5	819	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	404.700987012497	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTTTGCACCTCCTTT	9051	False	NA	NA	False	AAGAAA	-18	NA	17947621	17941833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17942408_17943109_17943196_17944121_17944145_17947485
transcript_86673.known	chr20	+	1936	5	FSM	ENSG00000125871.14	ENST00000377709.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	103.939886472903	2238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	15	True	NA	13	True	AATAAA	-22	NA	17969072	17991122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17969142_17969800_17970131_17975683_17975904_17988165_17988299_17989938
transcript_86675.known	chr20	+	2231	5	FSM	ENSG00000125871.14	ENST00000377710.10	2231	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	13.9821314541096	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	0	True	NA	13	True	AATAAA	-22	NA	17969017	17991122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17969142_17969800_17970371_17975683_17975904_17988165_17988299_17989938
transcript_86685.known	chr20	+	1781	3	FSM	ENSG00000125871.14	ENST00000377704.4	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	114	2229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	14	True	NA	13	True	AATAAA	-22	NA	17969114	17991122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17969142_17969800_17970371_17989938
transcript_86687.known	chr20	+	740	3	FSM	ENSG00000125871.14	ENST00000467391.1	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	112.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTAATTTGTTGAAATG	33	False	NA	NA	False	NA	NA	NA	17970056	17990231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17970371_17988165_17988299_17989938
transcript_86691.nic	chr20	+	891	2	ISM	ENSG00000125871.14	ENST00000377710.10	2231	5	-129	20684	-129	-19793	5prime_fragment	FALSE	canonical	3	244	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGAGGTTTGGTTTTGTT	790	False	NA	7	True	AATAGA	-18	NA	17968888	17970438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_17969142_17969800
transcript_86696.known	chr20	+	1151	2	FSM	ENSG00000232838.4	ENST00000432901.4	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	0	1428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	1	True	NA	12	True	AATAAA	-18	NA	18137862	18143169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18138052_18142207
transcript_86697.known	chr20	+	3927	11	FSM	ENSG00000149474.15	ENST00000377681.8	3927	11	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	103.96080992374	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGCGTCAATCTAGTC	NA	False	NA	23	True	AATAAA	-24	NA	18137841	18188374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_86698.known	chr20	+	2654	7	FSM	ENSG00000125846.16	ENST00000425686.3	2654	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	14.0880169726694	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	-11	True	NA	17	True	AATAAA	-25	NA	18288526	18316996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18297984_18298063_18298288_18298465_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_8670.known	chr1	+	745	4	FSM	ENSG00000231365.7	ENST00000425884.6	1227	4	0	482	0	-482	multi-exon	FALSE	canonical	3	5	junction_3	3.2659863237109	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAATAC	-6	True	NA	NA	False	NA	NA	NA	119140395	119150934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119140794_119146952_119147070_119150564_119150653_119150792
transcript_86700.known	chr20	+	2717	6	FSM	ENSG00000125846.16	ENST00000396026.7	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7556339129849	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288282	18316994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18297984_18298063_18305007_18305179_18305680_18305808_18306297_18306394_18315071
transcript_86703.known	chr20	+	2642	5	FSM	ENSG00000125846.16	ENST00000401790.5	2642	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	15.6424902109607	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288282	18316994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_86706.known	chr20	+	2318	5	FSM	ENSG00000125846.16	ENST00000628216.2	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	16.8893457540545	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTGTGTCCC	-27	True	NA	12	True	AATAAA	-20	NA	18288510	18316991	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18297984_18298063_18305680_18305808_18306297_18306394_18315068
transcript_86709.known	chr20	+	523	4	FSM	ENSG00000125846.16	ENST00000434018.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.779617264871	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTCCTGAGGGAGAAG	-9	True	NA	NA	False	NA	NA	NA	18288528	18315279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18305667_18305808_18306297_18306394_18315068
transcript_86710.nnic	chr20	+	2257	4	NIC	ENSG00000125846.16	novel	2717	6	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	15.5777619273972	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288493	18316994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_18288605_18305680_18305808_18306297_18306394_18315071
transcript_86711.nic	chr20	+	844	3	ISM	ENSG00000125846.16	ENST00000425686.3	2654	7	-1	18021	-1	-16131	5prime_fragment	FALSE	canonical	3	8	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAACAAAAGGGAGAC	-12	True	NA	NA	False	ATTAAA	-18	NA	18288525	18298975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_18288605_18297984_18298063_18298288
transcript_86712.nnic	chr20	+	676	3	NNC	ENSG00000125846.16	novel	2660	5	NA	NA	6	-20468	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTCTATATTCTTGAGT	-3	True	NA	20	True	AATAAA	-17	NA	18288534	18294638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_18288605_18289898_18290075_18294208
transcript_86713.known	chr20	+	2341	3	FSM	ENSG00000125846.16	ENST00000535822.5	2341	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	NA	False	NA	15	True	AATAAA	-23	NA	18288282	18316994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18306297_18306394_18315071
transcript_86714.known	chr20	+	1999	2	FSM	ENSG00000125846.16	ENST00000630056.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	-9	True	NA	15	True	AATAAA	-23	NA	18288528	18316994	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18315071
transcript_86715.nic	chr20	+	1070	2	ISM	ENSG00000125846.16	ENST00000360010.9	481	6	21	16131	-1	-16131	5prime_fragment	FALSE	canonical	3	10	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAACAAAAGGGAGAC	-12	True	NA	NA	False	ATTAAA	-18	NA	18288525	18298975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_18288605_18297984
transcript_86717.known	chr20	+	2242	4	FSM	ENSG00000125846.16	ENST00000316358.8	2242	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.6320415405843	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTGTGTCCCTCATT	2071	False	NA	17	True	AATAAA	-25	NA	18297984	18316996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18298063_18305667_18305808_18306297_18306394_18315068
transcript_86723.nic	chr20	-	1831	14	NIC	ENSG00000089091.16	novel	3498	21	NA	NA	-44	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_2	12.5330332751861	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCAGAGTCTGCTT	NA	False	NA	2	True	AATAAA	-16	NA	18467074	18398343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_18398627_18412645_18412854_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452683_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465378_18466995
transcript_86727.nic	chr20	-	2366	10	NIC	ENSG00000089091.16	novel	3295	20	NA	NA	-44	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	33.7638860322683	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18413266	18383366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
transcript_86732.nic	chr20	-	1851	6	ISM	ENSG00000089091.16	ENST00000476058.5	1709	7	182	0	182	0	3prime_fragment	FALSE	canonical	3	66	junction_5	16.1567323428966	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394521	18383366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253
transcript_86733.nnic	chr20	-	1662	6	NNC	ENSG00000089091.16	novel	1709	7	NA	NA	163	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_5	33.7378126143353	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCATTCCTTTCTT	NA	False	NA	0	True	AATAAA	-21	NA	18394540	18383366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394461
transcript_86736.known	chr20	-	837	6	FSM	ENSG00000089091.16	ENST00000480488.2	837	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	21.2546465508133	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTAAGTGTCTTTTTTTG	-1	True	NA	NA	False	GATAAA	-44	NA	18413222	18393713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412854_18412967
transcript_86739.known	chr20	-	3498	21	FSM	ENSG00000089091.16	ENST00000262547.9	3498	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	31.1452644875589	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGACTCATTCCTTTC	NA	False	NA	-2	True	AATAAA	-19	NA	18467185	18383368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412836_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452683_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465378_18466995
transcript_86741.nic	chr20	-	790	3	ISM	ENSG00000089091.16	ENST00000480488.2	837	6	-44	4630	-44	0	5prime_fragment	FALSE	non_canonical	0	0	junction_2	20	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCAGAGTCTGCTT	NA	False	NA	2	True	AATAAA	-16	NA	18413266	18398343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_18398627_18412645_18412854_18412967
transcript_86751.known	chr20	+	2156	9	FSM	ENSG00000132664.12	ENST00000377603.5	2156	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	15.2868407462104	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTATGGTATTCTGTT	-24	True	NA	NA	False	AATAAA	-21	NA	18467389	18484646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_86752.known	chr20	+	2257	9	FSM	ENSG00000132664.12	ENST00000462997.5	2257	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	41.5990910357426	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	-25	True	NA	NA	False	AATAAA	-18	NA	18467388	18484643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18467672_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_86757.nic	chr20	+	2036	8	NIC	ENSG00000132664.12	novel	2257	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	46.11387856078	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	-25	True	NA	NA	False	AATAAA	-18	NA	18467388	18484643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_18467569_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_8676.nic	chr1	+	1372	3	FSM	ENSG00000231365.7	ENST00000688395.1	1350	3	-30	8	-8	-8	multi-exon	FALSE	canonical	3	9	junction_1	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATAGCAGCATGATTT	-19	True	NA	20	True	AATAAA	-17	NA	119140382	119151408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119140794_119146952_119147070_119150564
transcript_86766.nnic	chr20	+	1162	3	Fusion	ENSG00000225419.1_ENSG00000214612.3	novel	478	2	NA	NA	-41	55	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGAACTAGGTTTTACAT	-4	True	NA	NA	False	AATACA	-29	NA	18485223	18505121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_+_18485627_18485936_18486148_18504573
transcript_86767.nnic	chr20	-	2928	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4315203431078	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	-2	True	NA	NA	False	ATTAAA	-20	NA	18497256	18486539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_18487692_18488637_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_8677.known	chr1	+	540	2	FSM	ENSG00000231365.7	ENST00000457043.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTACTGAGACCCTGG	198	False	NA	NA	False	AATAAA	-34	NA	119140707	119142200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119140794_119141746
transcript_86770.nnic	chr20	-	2154	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-31	-774	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4315203431078	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATACTCTTCATTCCT	-2	True	NA	58	True	AATATA	-17	NA	18497256	18487313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_18487692_18488637_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_86771.nnic	chr20	-	2096	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-31	-832	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.4315203431078	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGACCTCTTTCTCT	-2	True	NA	0	True	AAAAAG	-27	NA	18497256	18487371	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_18487692_18488637_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_86775.known	chr20	-	3843	5	FSM	ENSG00000089050.16	ENST00000337227.9	3843	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	14.1155942134931	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	7	True	NA	NA	False	ATTAAA	-20	NA	18497225	18486539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_86777.known	chr20	-	830	4	FSM	ENSG00000089050.16	ENST00000491835.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	47.588514020367	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTAAAATTAAATAGGT	15	True	NA	NA	False	NA	NA	NA	18497174	18489458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18497068
transcript_86783.known	chr20	+	434	1	FSM	ENSG00000214612.3	ENST00000415286.1	434	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	860	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACAAACCATGCTGGGT	32	False	NA	NA	False	NA	NA	NA	18504632	18505066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18504600_18505100
transcript_86784.known	chr20	+	3026	20	FSM	ENSG00000101310.17	ENST00000650089.1	3026	20	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	107.989303871691	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	23	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18507973_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_86789.known	chr20	+	3464	20	FSM	ENSG00000101310.17	ENST00000336714.8	3464	20	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	110.440442831158	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	2919	False	NA	NA	False	AATATA	-19	NA	18507519	18561415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_8679.nnic	chr1	+	1005	4	NNC	ENSG00000232650.6	novel	1219	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	2.16024689946929	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCAGTCCGTGGTTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	119327398	119330815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_119327917_119328130_119328288_119328743_119328790_119330531
transcript_86794.known	chr20	+	2680	20	FSM	ENSG00000101310.17	ENST00000643747.1	2680	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	181.729197943098	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAATAAATCTAGATG	-27	True	NA	-2	True	NA	NA	NA	18507889	18561055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524486_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_86795.known	chr20	+	3351	20	FSM	ENSG00000101310.17	ENST00000377465.6	3351	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	167.142515532748	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	23	True	NA	NA	False	AATATA	-19	NA	18507939	18561415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18508298_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_86804.known	chr20	+	1133	8	FSM	ENSG00000101310.17	ENST00000450074.6	1133	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	241.932947364364	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGCTCTTGGGTATGG	-29	True	NA	NA	False	AAAAAG	-10	NA	18507543	18526531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18507670_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372
transcript_86805.known	chr20	+	670	2	FSM	ENSG00000232388.5	ENST00000608034.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTAAGACTTTAATGAC	7	True	NA	NA	False	NA	NA	NA	18567446	18569155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18567597_18568635
transcript_86806.known	chr20	+	490	2	FSM	ENSG00000232388.5	ENST00000411646.2	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	0	11695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGCGTTTTCTTTTTT	-8	True	NA	18	True	AATAAA	-18	NA	18567431	18569560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18567597_18569235
transcript_86809.known	chr20	+	3953	6	FSM	ENSG00000125821.13	ENST00000377452.4	3953	6	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_4	35.3417600014487	1950	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGGAGAATGGGGTGGAC	-1	True	NA	NA	False	NA	NA	NA	18588053	18766644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18588116_18593730_18593822_18596005_18596242_18628126_18628234_18744099_18744272_18763359
transcript_86815.known	chr20	+	1539	1	FSM	ENSG00000273148.1	ENST00000609087.1	1539	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGGGCCTTTGTTTA	452	False	NA	NA	False	AATAAA	-25	NA	18794528	18796067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18794500_18796100
transcript_86816.known	chr20	+	3922	17	FSM	ENSG00000185052.13	ENST00000328041.11	3922	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	4.62162038683404	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTGGAAAGCTGTGCAT	4	True	NA	44	True	AATAAA	-45	NA	19212641	19722926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_19212985_19280958_19281088_19515487_19515565_19579999_19580075_19584970_19585056_19585440_19585545_19654061_19654137_19665863_19665890_19673600_19673655_19681857_19681992_19684175_19684337_19685099_19685362_19693258_19693426_19696796_19696912_19698567_19698681_19717527_19717594_19720990
transcript_86817.nic	chr20	+	1221	4	NIC	ENSG00000132669.14	novel	4440	13	NA	NA	18	-46	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGTGTGTGTATTTAA	104	False	NA	NA	False	TTTAAA	-16	NA	19758165	19890284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_19758328_19799621_19799748_19871081_19871296_19889565
transcript_86818.known	chr20	-	1648	1	FSM	ENSG00000268628.2	ENST00000598007.2	1648	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	-3	True	AATAAA	-16	NA	19758037	19756389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_19756400_19758000
transcript_86819.known	chr20	-	501	1	FSM	ENSG00000236992.2	ENST00000424633.1	501	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGGAAAATATTTCAATA	85	False	NA	NA	False	NA	NA	NA	19823943	19823442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_19823400_19823900
transcript_8682.known	chr1	+	1219	3	FSM	ENSG00000232650.6	ENST00000420059.6	1219	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCAGTCCGTGGTTTG	NA	False	NA	NA	False	ATTAAA	-26	NA	119327398	119330815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119328288_119328743_119328790_119330531
transcript_86823.known	chr20	+	1222	7	FSM	ENSG00000173418.12	ENST00000484480.5	1222	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	326.887552871354	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	-29	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_20017450_20018361_20018518_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_86826.known	chr20	+	1000	5	FSM	ENSG00000173418.12	ENST00000480550.1	1000	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	312.241493078675	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20	True	NA	32	True	TATAAA	-35	NA	20017358	20033629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_20017450_20025668_20025768_20026783_20026920_20032507_20032654_20033101
transcript_86832.known	chr20	+	1040	6	FSM	ENSG00000173418.12	ENST00000334982.9	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_4	76.8728820846467	3054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	23	True	NA	58	True	AATACA	-43	NA	20017361	20033655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_86833.known	chr20	+	920	5	FSM	ENSG00000173418.12	ENST00000310450.8	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	284.946924882512	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	-29	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20033101
transcript_86840.known	chr20	-	1228	2	FSM	ENSG00000225127.4	ENST00000671648.1	1228	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	4813	False	NA	NA	False	AATAAA	-16	NA	21101567	21092808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21093853_21101383
transcript_86841.known	chr20	-	1288	2	FSM	ENSG00000225127.4	ENST00000420705.2	1288	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	21106514	21092808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21093853_21106270
transcript_86844.known	chr20	-	1155	2	FSM	ENSG00000225127.4	ENST00000668193.1	1155	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	3997	False	NA	NA	False	AATAAA	-16	NA	21102383	21092808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21093853_21102272
transcript_86861.nnic	chr20	+	795	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-28047	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	73.964139132089	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21190411	21246622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_21190545_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_86864.nnic	chr20	+	849	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-28047	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	67.20635295529	319	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21190411	21246622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_21190545_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_86880.known	chr20	+	2102	13	FSM	ENSG00000088970.16	ENST00000619189.5	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_7	36.263981977837	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	-3	True	NA	NA	False	AATAAA	-20	NA	21126081	21246622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_86881.known	chr20	+	1875	11	FSM	ENSG00000088970.16	ENST00000616848.4	1875	11	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	66.3463638792662	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGTGTTAATATGT	0	True	NA	NA	False	AATAAA	-16	NA	21126051	21246618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21126205_21132096_21132160_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_86882.known	chr20	+	2014	12	FSM	ENSG00000088970.16	ENST00000620891.4	2014	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	64.0851706006085	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	2	True	NA	NA	False	AATAAA	-20	NA	21126006	21246622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21126205_21132096_21132160_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_86883.known	chr20	+	1397	9	FSM	ENSG00000088970.16	ENST00000621366.1	1397	9	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	46.7252608339429	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21162082	21246622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_86884.known	chr20	-	391	1	FSM	ENSG00000214535.3	ENST00000457423.1	391	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3409	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	NA	False	NA	NA	False	AAAACA	-35	NA	21166596	21166205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21166200_21166600
transcript_86905.nnic	chr20	+	946	4	NIC	ENSG00000088930.8	novel	3408	30	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	531.178145467434	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	-1	True	NA	25	True	AATAAA	-19	NA	21303283	21389825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_21303474_21381993_21382058_21386867_21387007_21389272
transcript_86907.known	chr20	+	3408	30	FSM	ENSG00000088930.8	ENST00000377191.5	3408	30	0	0	0	0	multi-exon	TRUE	canonical	3	856	junction_5	86.7217590679426	2633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	-6	True	NA	25	True	AATAAA	-19	NA	21303330	21389825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_86912.nnic	chr20	+	815	3	FSM	ENSG00000238034.2	ENST00000686630.1	707	3	-108	0	-108	0	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTAACTGGCCATCTT	NA	False	NA	NA	False	ATTAAA	-14	NA	21937649	21970783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21937898_21947648_21947703_21970270
transcript_86914.known	chr20	+	693	4	FSM	ENSG00000234435.3	ENST00000449427.3	693	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTGTGGTATTTTGT	NA	False	NA	NA	False	AATAAA	-16	NA	22054073	22074654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_22054285_22068438_22068689_22073387_22073467_22074501
transcript_86917.known	chr20	-	907	4	ISM	ENSG00000259974.4	ENST00000638550.3	1840	5	5	3948	5	-3709	5prime_fragment	FALSE	canonical	3	87	junction_1	7.58653778449403	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAGTCTTCTGTGACTA	1	True	NA	-5	True	AATAAA	-15	NA	22578580	22564500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_22565117_22566682_22566811_22567793_22567886_22578509
transcript_86924.nnic	chr20	-	738	3	NIC	ENSG00000259974.4	novel	1840	5	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	51.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGTATTTCTTTGCA	6878	False	NA	NA	False	AATAAA	-16	NA	22578612	22560552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_22561096_22567793_22567886_22578509
transcript_86925.known	chr20	-	4912	4	FSM	ENSG00000259974.4	ENST00000564492.1	4912	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	41.8276888622304	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTGTATTTCTTTGCA	6848	False	NA	NA	False	AATAAA	-16	NA	22578642	22560552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_22565117_22566682_22566806_22567793_22567886_22578509
transcript_86927.known	chr20	+	1062	2	FSM	ENSG00000132661.4	ENST00000254998.3	1062	2	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	0	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGATGTGTTTGA	-9	True	NA	15	True	AATACA	-14	NA	23350790	23354771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_23351062_23353980
transcript_86929.known	chr20	-	454	3	FSM	ENSG00000232645.6	ENST00000444981.5	454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATCTGCCTTATAA	4863	False	NA	NA	False	AATAAA	-16	NA	23357855	23356593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23356826_23357050_23357138_23357720
transcript_86930.nic	chr20	-	507	3	FSM	ENSG00000232645.6	ENST00000693649.1	486	3	-21	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATCTGCCTTATAA	4576	False	NA	NA	False	AATAAA	-16	NA	23358142	23356593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23356826_23357050_23357138_23357954
transcript_86932.known	chr20	-	514	3	FSM	ENSG00000232645.6	ENST00000687401.1	692	3	170	8	103	0	multi-exon	FALSE	canonical	2	7	junction_1	5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATCTGCCTTATAA	4713	False	NA	NA	False	AATAAA	-16	NA	23358005	23356593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23356970_23357050_23357138_23357954
transcript_86933.known	chr20	-	505	2	FSM	ENSG00000232645.6	ENST00000452395.2	764	2	56	203	5	-201	multi-exon	FALSE	canonical	3	17	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAGCGAGGGAGAGA	-10	True	NA	NA	False	AAGAAA	-39	NA	23358116	23356794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23357138_23357954
transcript_86934.nic	chr20	+	1036	2	ISM	ENSG00000125812.16	ENST00000338121.10	4834	6	-35	7755	-35	778	5prime_fragment	FALSE	canonical	3	67	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGGGAGAAGAAGAAGAG	-37	True	NA	NA	False	AAGAAA	-43	NA	23362146	23365307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_23362238_23364362
transcript_86935.known	chr20	-	3837	11	FSM	ENSG00000125814.17	ENST00000377026.4	3837	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	27.7562605550532	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-33	True	NA	-1	True	AATAAA	-19	NA	23421488	23374521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397189_23402992_23403073_23421304
transcript_86940.known	chr20	-	3754	10	FSM	ENSG00000125814.17	ENST00000432543.6	3754	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	33.4863156129983	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTATTTTAACCT	-64	True	NA	2	True	AATAAA	-22	NA	23421519	23374518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23402992_23403073_23421304
transcript_86941.known	chr20	-	3824	10	FSM	ENSG00000125814.17	ENST00000398425.7	3824	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_7	27.1129325435503	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTATTTTAACCT	-64	True	NA	2	True	AATAAA	-22	NA	23421519	23374518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23397071_23397189_23402992_23403073_23421304
transcript_86943.nic	chr20	-	3670	9	NIC	ENSG00000125814.17	novel	3837	11	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	19.4578872182979	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-30	True	NA	-1	True	AATAAA	-19	NA	23421485	23374521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23402992_23403073_23421304
transcript_86948.known	chr20	-	1651	7	FSM	ENSG00000125814.17	ENST00000472855.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	21.1633855724666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAACTAAGTAGTGAG	41	True	NA	NA	False	ATTAAA	-13	NA	23421414	23378798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23402992_23403073_23421304
transcript_86951.known	chr20	-	576	3	FSM	ENSG00000125831.10	ENST00000377009.8	576	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAAGATCGTGATTC	-5	True	NA	NA	False	AATAAA	-15	NA	23452876	23450411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23450590_23451815_23451921_23452583
transcript_86952.known	chr20	-	461	2	FSM	ENSG00000125831.10	ENST00000377007.3	461	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGTGATTCCACTTTTTT	14	False	NA	NA	False	AATAAA	-24	NA	23452857	23450402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23450590_23452583
transcript_86954.nnic	chr20	+	849	3	NNC	ENSG00000204663.9	novel	1157	4	NA	NA	12754	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	1	36	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGTACAAATTACTTT	NA	False	NA	NA	False	AATAAA	-28	NA	23533629	23542018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_23534023_23534197_23534309_23541673
transcript_86955.known	chr20	-	694	3	FSM	ENSG00000101435.5	ENST00000376979.4	694	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTGCTGTAGTTCTC	-3	True	NA	NA	False	ATTAAA	-19	NA	23568484	23564731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23565038_23565973_23566088_23568210
transcript_86957.nnic	chr20	-	745	4	NNC	ENSG00000101439.9	novel	832	4	NA	NA	-138	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	455.396530509401	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	NA	False	NA	-10	True	AATAAA	-15	NA	23638093	23633656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_23634000_23635253_23635368_23637619_23637791_23637976
transcript_86962.known	chr20	-	793	3	FSM	ENSG00000101439.9	ENST00000376925.8	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	933	junction_2	31.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	1	True	NA	-10	True	AATAAA	-15	NA	23637955	23633656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23634000_23635253_23635368_23637619
transcript_86964.nnic	chr20	-	777	4	NNC	ENSG00000101441.5	novel	749	3	NA	NA	-307	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.20144916122817	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	145	False	NA	-9	True	ATTAAA	-14	NA	23689345	23685639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_23685978_23687087_23687202_23688741_23689002_23689280
transcript_86965.known	chr20	-	749	3	FSM	ENSG00000101441.5	ENST00000217423.4	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	0	True	NA	-9	True	ATTAAA	-14	NA	23689038	23685639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23685978_23687087_23687202_23688741
transcript_86971.known	chr20	-	655	4	FSM	ENSG00000170373.9	ENST00000398402.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	25.0377492776186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGGAGGCCTCCCCATGT	1	True	NA	NA	False	NA	NA	NA	23751268	23747730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23747900_23749015_23749130_23750638_23750899_23751156
transcript_86975.known	chr20	-	749	3	FSM	ENSG00000170373.9	ENST00000304749.7	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	2	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-1	True	NA	NA	False	ATTAAA	-14	NA	23750935	23747561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23747900_23749015_23749130_23750638
transcript_86976.known	chr20	-	746	3	FSM	ENSG00000170369.4	ENST00000304725.3	746	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-1	True	NA	NA	False	ATTAAA	-14	NA	23826729	23823768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23824104_23825209_23825324_23826432
transcript_86977.known	chr20	-	755	3	FSM	ENSG00000170367.5	ENST00000304710.5	755	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	0	True	NA	NA	False	ATTAAA	-14	NA	23879748	23875933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23876272_23877504_23877619_23879445
transcript_86980.nnic	chr20	+	1561	5	NNC	ENSG00000101463.6	novel	417	2	NA	NA	208	-32031	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_4	24.1712639305436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTTGTGTTTCATTGGT	111	False	NA	1	True	AATAAA	-15	NA	24469836	24634585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24633551_24633771_24634028
transcript_86981.known	chr20	+	2092	4	FSM	ENSG00000101463.6	ENST00000376862.4	2092	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	17.2819751957543	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	-38	True	NA	45	True	NA	NA	NA	24469628	24666616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_24469754_24543019_24543578_24584855_24584994_24665345
transcript_86984.nnic	chr20	+	2056	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	208	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	21.0449254902195	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	111	False	NA	45	True	NA	NA	NA	24469836	24666616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_8699.known	chr1	+	1866	12	FSM	ENSG00000092621.13	ENST00000641023.2	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	94.1544361739779	17471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	-3	True	NA	15	True	AATAAA	-15	NA	119711933	119744215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_86991.known	chr20	-	2202	9	FSM	ENSG00000101474.12	ENST00000217456.3	2202	9	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	56.0600961023079	1872	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	27	False	24992778	-4	True	AATAAA	-34	NA	24992751	24962924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_24964023_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_86995.known	chr20	+	4104	15	FSM	ENSG00000197586.13	ENST00000376652.9	4104	15	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	75.9804284681528	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGTGTCCAAAAATTTAT	-12	True	NA	NA	False	NA	NA	NA	25195711	25228075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_86996.known	chr20	+	2766	15	FSM	ENSG00000197586.13	ENST00000360031.6	2766	15	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	78.61648059032	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-23	True	NA	36	True	AATAAA	-29	NA	25195700	25226729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_86997.nic	chr20	+	2699	14	NIC	ENSG00000197586.13	novel	2654	14	NA	NA	-24	0	combination_of_known_junctions	TRUE	canonical	3	82	junction_2	88.0249426727696	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-1	True	NA	36	True	AATAAA	-29	NA	25195668	25226729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_8700.known	chr1	+	1180	5	FSM	ENSG00000092621.13	ENST00000641573.1	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	93.5748363610645	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGCGG	-2	True	NA	NA	False	ACTAAA	-17	NA	119711934	119727684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003
transcript_87003.known	chr20	+	2708	14	FSM	ENSG00000197586.13	ENST00000354989.9	2708	14	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	72.3440988543866	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-31	True	NA	36	True	AATAAA	-29	NA	25195692	25226729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_87007.nic	chr20	+	2392	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	94	junction_1	72.9438520751102	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	-37	True	NA	36	True	AATAAA	-29	NA	25195686	25226729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_8701.known	chr1	+	2794	11	FSM	ENSG00000092621.13	ENST00000642021.1	2794	11	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	97.7235386178786	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	7	False	NA	1	True	AATAAA	-1	NA	119711900	119744201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119743045_119743885
transcript_8702.known	chr1	+	1780	11	FSM	ENSG00000092621.13	ENST00000641074.1	1780	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	723.042626682549	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTCTGCACTTTTG	NA	False	NA	12	True	AATAAA	-12	NA	119711885	119744212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119742806_119743045_119743885
transcript_87020.known	chr20	+	4116	20	FSM	ENSG00000100994.12	ENST00000216962.9	4116	20	0	0	0	0	multi-exon	TRUE	canonical	3	305	junction_10	31.8025417545495	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	10	True	NA	34	True	ATTAAA	-24	NA	25248084	25298012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25292405_25292614_25294157_25294293_25295603_25295671_25296369
transcript_8703.known	chr1	+	1774	12	FSM	ENSG00000092621.13	ENST00000641947.1	1774	12	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_10	691.400208225225	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATCAATAGGGAGAGAA	NA	False	NA	NA	False	AAGAAA	-10	NA	119711883	119744094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741877_119742806_119743045_119743885
transcript_87039.known	chr20	+	3311	7	FSM	ENSG00000101003.10	ENST00000262460.5	3311	7	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	33.0689515339624	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	-24	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922
transcript_8704.known	chr1	+	1638	10	FSM	ENSG00000092621.13	ENST00000641115.1	1638	10	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_8	753.295934830461	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	4	False	NA	15	True	AATAAA	-15	NA	119711897	119744215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119742806_119743045_119743885
transcript_87043.known	chr20	-	4991	24	FSM	ENSG00000101004.15	ENST00000278886.11	4991	24	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_18	39.7899019211663	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAGTTTGTTTTTAAT	17	True	NA	-6	True	AATAAA	-21	NA	25585531	25452696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25476042_25477090_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_87044.known	chr20	-	3803	2	FSM	ENSG00000170191.5	ENST00000304788.4	3803	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTCATCTCTTT	-32	True	NA	NA	False	AATAAA	-18	NA	25624014	25612934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_25616582_25623858
transcript_8705.known	chr1	+	1031	8	FSM	ENSG00000092621.13	ENST00000641811.1	1031	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	817.21415772846	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	8735	False	NA	15	True	AATAAA	-15	NA	119721275	119744215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119743885
transcript_87051.nnic	chr20	+	1121	8	NNC	ENSG00000213742.7	novel	1781	10	NA	NA	-35	102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.99489633121898	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATTCTTCTCAAACTA	-18	True	NA	NA	False	AATAAA	-19	NA	25624121	25677154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_25624216_25632157_25632289_25634048_25634171_25634728_25634828_25645530_25645649_25673851_25674008_25674896_25675079_25676935
transcript_87057.nnic	chr20	+	1014	7	NIC	ENSG00000213742.7	novel	650	5	NA	NA	-27	102	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	6.12825877028341	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATTCTTCTCAAACTA	-13	True	NA	NA	False	AATAAA	-19	NA	25624017	25677154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25624136_25634048_25634171_25634728_25634828_25645530_25645649_25673851_25674008_25674896_25675079_25676935
transcript_8706.known	chr1	+	508	3	FSM	ENSG00000092621.13	ENST00000496756.2	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	2421	junction_2	52.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAAAGCTAGTCTCTCC	NA	False	NA	NA	False	NA	NA	NA	119711886	119723457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375
transcript_87063.nnic	chr20	+	1003	7	NNC	ENSG00000213742.7	novel	1781	10	NA	NA	-35	102	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATTCTTCTCAAACTA	-18	True	NA	NA	False	AATAAA	-19	NA	25624121	25677154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_25624216_25632157_25632289_25634048_25634171_25634728_25634828_25673851_25674008_25674896_25675079_25676935
transcript_87069.nnic	chr20	+	917	6	NIC	ENSG00000213742.7	novel	4666	5	NA	NA	-48	102	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	4.67332857821917	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATTCTTCTCAAACTA	NA	False	NA	NA	False	AATAAA	-19	NA	25623996	25677154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25624136_25634048_25634171_25634728_25634828_25673851_25674008_25674896_25675079_25676935
transcript_87071.nnic	chr20	+	1069	6	NIC	ENSG00000213742.7	novel	650	5	NA	NA	-181	102	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7.78716893357271	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATTCTTCTCAAACTA	NA	False	NA	NA	False	AATAAA	-19	NA	25623863	25677154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25624136_25634048_25634171_25645530_25645649_25673851_25674008_25674896_25675079_25676935
transcript_87075.nnic	chr20	+	906	6	NNC	ENSG00000213742.7	novel	1781	10	NA	NA	29	102	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.41350119714026	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATTCTTCTCAAACTA	7	True	NA	NA	False	AATAAA	-19	NA	25624087	25677154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_25624216_25634048_25634171_25634728_25634828_25673851_25674008_25674896_25675079_25676935
transcript_87081.nnic	chr20	+	714	5	NIC	ENSG00000213742.7	novel	4666	5	NA	NA	-27	102	combination_of_known_splicesites	FALSE	canonical	3	6	junction_4	7.66077672302228	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATTCTTCTCAAACTA	-13	True	NA	NA	False	AATAAA	-19	NA	25624017	25677154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25624136_25634048_25634171_25634728_25634828_25673851_25674008_25676935
transcript_87086.known	chr20	+	650	5	FSM	ENSG00000213742.7	ENST00000455791.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.71036092035419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAGACTGAATCAGTA	28	False	NA	NA	False	AATAGA	-4	NA	25624058	25677052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25624136_25645530_25645649_25673851_25674008_25674896_25675079_25676935
transcript_87089.known	chr20	-	4237	5	FSM	ENSG00000130684.14	ENST00000252979.6	4237	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	8.57321409974112	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGGGACACTGACAG	-8	True	NA	NA	False	ATTAAA	-16	NA	25696853	25673194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390_25686467_25696758
transcript_8709.known	chr1	-	6927	5	FSM	ENSG00000265808.4	ENST00000578049.4	6927	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_2	16.9115345252878	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGGTCCCCTTCTGTT	-25	True	NA	NA	False	TATAAA	-40	NA	120176520	120150897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_120157193_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_87097.known	chr20	+	964	4	FSM	ENSG00000213742.7	ENST00000439498.5	964	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.39934634239519	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGGGTCTCACTC	28	False	NA	NA	False	GATAAA	-12	NA	25624058	25677548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25624136_25645530_25645649_25673851_25674008_25676935
transcript_871.nic	chr1	-	786	4	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-356	16738	-356	-10704	5prime_fragment	FALSE	canonical	3	83	junction_3	8.05536398239638	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACGTAGGCATCGTAG	NA	False	NA	-15	True	AAAAAG	-30	NA	1659368	1652475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1652567_1655368_1655485_1657374_1657499_1658913
transcript_87103.nnic	chr20	+	1079	3	NIC	ENSG00000213742.7	novel	4666	5	NA	NA	-181	-34931	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGGCTCTATTTTGTT	NA	False	NA	NA	False	CATAAA	-13	NA	25623863	25635413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25624136_25634048_25634171_25634728
transcript_87110.known	chr20	+	867	3	FSM	ENSG00000226465.4	ENST00000649818.1	867	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGAACAGCAGATCCTTAA	-1	True	NA	NA	False	AATACA	-35	NA	25697002	25752709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25697096_25734268_25734896_25752562
transcript_87112.known	chr20	+	320	2	FSM	ENSG00000226465.4	ENST00000376445.3	320	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTCTAAGAATGTAT	14	True	NA	NA	False	AGTAAA	-12	NA	25751217	25752761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25751339_25752562
transcript_87113.known	chr20	+	919	5	FSM	ENSG00000125804.14	ENST00000666563.1	919	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACCTACCATTTCTCG	NA	False	NA	NA	False	AATAAA	-41	NA	26057380	26082975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_26057603_26068916_26069205_26073769_26073870_26081163_26081391_26082893
transcript_87114.known	chr20	+	885	5	FSM	ENSG00000125804.14	ENST00000389261.4	885	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGGTACTTAGACCTA	NA	False	NA	NA	False	AATAAA	-31	NA	26057380	26082965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_26057603_26068916_26069205_26073769_26073870_26081187_26081391_26082893
transcript_87116.nic	chr20	-	1237	11	NIC	ENSG00000282826.3	novel	1098	10	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	24.4466766657556	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	NA	False	NA	-3	True	AATAAA	-27	NA	28602879	28580632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_28580745_28581918_28582030_28583018_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_87123.nic	chr20	-	1160	10	FSM	ENSG00000282826.3	ENST00000687441.1	1098	10	-63	1	-23	0	multi-exon	FALSE	canonical	3	26	junction_1	25.5217167269633	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	NA	False	NA	-3	True	AATAAA	-27	NA	28602879	28580632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_87130.known	chr20	-	769	9	FSM	ENSG00000282826.3	ENST00000358464.10	1025	9	180	76	50	-74	multi-exon	FALSE	canonical	3	26	junction_1	24.6421260243511	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	17	True	NA	-79	True	AAAAAG	-37	NA	28602664	28580708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_87136.known	chr20	-	890	9	FSM	ENSG00000282826.3	ENST00000686258.1	976	9	83	3	8	0	multi-exon	FALSE	canonical	3	33	junction_7	21.7873242964803	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	4	True	NA	0	True	TATAAA	-16	NA	28602761	28583024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_8714.nnic	chr1	-	793	5	NNC	ENSG00000265808.4	novel	2230	2	NA	NA	-7	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	71.4470958122162	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTGCAGTGCTGCTC	-32	True	NA	0	True	AATAAA	-20	NA	120176527	120157289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_120157444_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_87143.nic	chr20	-	872	8	FSM	ENSG00000282826.3	ENST00000686484.1	875	8	0	3	0	0	multi-exon	FALSE	canonical	3	49	junction_1	18.688641098872	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28	True	NA	0	True	TATAAA	-16	NA	28602843	28583024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_87144.nic	chr20	-	931	8	ISM	ENSG00000282826.3	ENST00000687441.1	1098	10	-63	2393	-23	0	5prime_fragment	FALSE	canonical	3	33	junction_6	21.1708309150268	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	NA	False	NA	0	True	TATAAA	-16	NA	28602879	28583024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_87147.nic	chr20	-	795	7	ISM	ENSG00000282826.3	ENST00000358464.10	1025	9	1	2392	0	0	5prime_fragment	FALSE	canonical	3	51	junction_6	14.7845640224301	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28	True	NA	0	True	TATAAA	-16	NA	28602843	28583024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_87153.nnic	chr20	-	500	3	NNC	ENSG00000282826.3	novel	2344	8	NA	NA	-23	-14673	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	23.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTCTTCCTAAATCAAT	NA	False	NA	NA	False	NA	NA	NA	28602879	28600590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_28600720_28601656_28601757_28602608
transcript_87154.nic	chr20	-	371	2	ISM	ENSG00000282826.3	ENST00000687825.1	1203	7	-23	15739	-23	-15739	5prime_fragment	FALSE	canonical	3	48	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCCTGAATGAATGTG	NA	False	NA	NA	False	NA	NA	NA	28602879	28601656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_28601757_28602608
transcript_87155.known	chr20	-	2344	8	FSM	ENSG00000282826.3	ENST00000650751.1	2344	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	37.1769074692825	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTCAGAATACAATCAAG	42	False	NA	NA	False	ATTAAA	-20	NA	28602773	28563849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_28565401_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601602_28601757_28602608
transcript_87156.known	chr20	-	2144	2	FSM	ENSG00000205611.5	ENST00000655971.1	2144	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTTATAGGAGCAGATT	NA	False	NA	NA	False	AATATA	-29	NA	30289956	30287014	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_30287473_30288270
transcript_87158.nnic	chr20	+	1291	8	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-220	72	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	49.513139876281	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGTTCTTGAGTTGTT	0	True	NA	NA	False	AATAAA	-21	NA	30377151	30399329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_30377722_30379584_30379652_30388452_30388579_30391196_30391309_30393550_30393656_30396861_30396954_30397934_30398046_30399221
transcript_87168.known	chr20	+	1585	13	FSM	ENSG00000101294.18	ENST00000466766.2	1585	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	351.799737856007	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCCTCCCCGGGAGCCAG	-21	True	NA	-13	True	AAGAAA	-11	NA	31514454	31569444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31527921_31528051_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_8717.nnic	chr1	-	1708	4	NIC	ENSG00000265808.4	novel	6927	5	NA	NA	0	1284	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	70.8111730041398	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTAAAGTTTTTGCA	-25	True	NA	-24	True	AATAAA	-23	NA	120176520	120156006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_120157193_120160383_120160531_120163209_120163371_120176306
transcript_87170.known	chr20	+	1715	13	FSM	ENSG00000101294.18	ENST00000398174.9	1715	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	341.59596829523	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	-34	True	NA	24	True	ATTAAA	-18	NA	31514441	31569543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568225_31569119
transcript_87171.known	chr20	+	1809	13	FSM	ENSG00000101294.18	ENST00000674240.1	1809	13	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_11	330.473145656345	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514427	31569567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568281_31569119
transcript_87172.known	chr20	+	1606	12	FSM	ENSG00000101294.18	ENST00000340852.9	1606	12	0	0	0	0	multi-exon	FALSE	canonical	3	796	junction_3	79.9821261024472	3039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	NA	False	NA	48	True	ATTAAA	-42	NA	31514427	31569567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_87175.known	chr20	+	1655	12	FSM	ENSG00000101294.18	ENST00000650367.1	1655	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	368.991097117622	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCCACACCCTGCAGGCA	22	True	NA	-50	True	NA	NA	NA	31514497	31569407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538555_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554759_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_87205.known	chr20	+	757	7	FSM	ENSG00000101294.18	ENST00000494153.5	757	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	357.911845136325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGCATCAGCATCGAA	1320	False	NA	NA	False	NA	NA	NA	31548780	31569174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31549115_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_8721.nnic	chr1	-	612	3	NNC	ENSG00000223804.5	novel	715	3	NA	NA	-94	11362	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	4	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGGGCAGACATT	1035	False	NA	NA	False	AATAAA	-16	NA	120341965	120255971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_120256227_120258775_120258884_120341716
transcript_87216.known	chr20	+	3932	3	FSM	ENSG00000101294.18	ENST00000498035.5	3932	3	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_2	16	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTTTTCTTAAATATTT	-19	True	NA	8	True	ATTAAA	-18	NA	31514456	31541733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31538178
transcript_87231.known	chr20	+	670	1	FSM	ENSG00000101898.6	ENST00000394552.3	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATATTGATTGTGTCGT	9	True	NA	NA	False	TATAAA	-36	NA	31547411	31548081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31547400_31548100
transcript_87232.known	chr20	+	2788	9	FSM	ENSG00000101294.18	ENST00000649583.1	2788	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_7	392.551250634869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCGGGCCACTGTGCTC	43	False	NA	22	True	ATTAAA	-16	NA	31547445	31569541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568281_31569119
transcript_87234.known	chr20	+	325	1	FSM	ENSG00000278276.1	ENST00000611296.1	325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTCTTTTAAGCCC	7473	False	NA	NA	False	AATAAA	-26	NA	31580889	31581214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31580900_31581200
transcript_87235.known	chr20	+	983	2	FSM	ENSG00000125968.9	ENST00000376112.4	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_1	0	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTGTAGTGACTTCT	1	True	NA	12	True	ATTAAA	-19	NA	31605288	31606510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31605814_31606052
transcript_87236.known	chr20	+	1233	1	FSM	ENSG00000125968.9	ENST00000376105.4	1233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	677	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTGACTTCTTGGGT	-5	True	NA	17	True	ATTAAA	-24	NA	31605282	31606515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31605300_31606500
transcript_87237.known	chr20	+	669	5	FSM	ENSG00000131055.5	ENST00000376075.4	669	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTCTTCTGCCTCTC	-7	True	NA	NA	False	AGTAAA	-15	NA	31637911	31645006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31637963_31639017_31639100_31639932_31640098_31643403_31643536_31644767
transcript_87239.known	chr20	+	338	4	FSM	ENSG00000131055.5	ENST00000490030.1	338	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGACATGAAGGTGAATC	14	False	NA	NA	False	NA	NA	NA	31637932	31644828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31637963_31639017_31639100_31639932_31640098_31644767
transcript_87241.nnic	chr20	-	2522	3	NNC	ENSG00000171552.14	novel	2373	3	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	191	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	1315	False	NA	NA	False	AATAAA	-25	NA	31722627	31664451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_31666087_31721654_31722331_31722416
transcript_87243.known	chr20	-	3212	3	FSM	ENSG00000171552.14	ENST00000676582.1	3212	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	109.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-10	True	NA	NA	False	AATAAA	-14	NA	31723529	31664462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722331_31722617
transcript_87244.known	chr20	-	2544	3	FSM	ENSG00000171552.14	ENST00000678563.1	2544	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	178.5	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-36	True	NA	NA	False	AATAAA	-14	NA	31723978	31664462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722331_31723734
transcript_87245.known	chr20	-	2413	3	FSM	ENSG00000171552.14	ENST00000676942.1	2413	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	201	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-18	True	NA	NA	False	AATAAA	-14	NA	31723960	31664462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722331_31723847
transcript_87246.known	chr20	-	2574	3	FSM	ENSG00000171552.14	ENST00000307677.5	2574	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	126	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-1	True	NA	NA	False	AATAAA	-19	NA	31722868	31664457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722349_31722617
transcript_87247.known	chr20	-	2227	3	FSM	ENSG00000171552.14	ENST00000422920.2	2227	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	82.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTAGGGTGGCCCTTGC	-10	True	NA	NA	False	GGGGCT	-26	NA	31723529	31665258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721843_31722331_31722617
transcript_87250.known	chr20	-	2496	3	FSM	ENSG00000171552.14	ENST00000376055.9	2496	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	66	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	969	False	NA	NA	False	AATAAA	-25	NA	31722973	31664451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721843_31722349_31722617
transcript_87251.known	chr20	-	2578	2	FSM	ENSG00000171552.14	ENST00000376062.6	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	1345	False	NA	NA	False	AATAAA	-25	NA	31722597	31664451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654
transcript_87252.known	chr20	-	2441	3	FSM	ENSG00000171552.14	ENST00000434194.2	2441	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	205	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-13	True	NA	NA	False	AATAAA	-14	NA	31722566	31664462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722349_31722443
transcript_87254.known	chr20	+	3605	19	FSM	ENSG00000088325.16	ENST00000340513.4	3605	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	286.555840980427	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTATTTGATGTTTTT	-27	True	NA	31	True	AATAAA	-25	NA	31739270	31801805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31780938_31781047_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_87256.known	chr20	+	3473	18	FSM	ENSG00000088325.16	ENST00000300403.11	3473	18	0	0	0	0	multi-exon	FALSE	canonical	3	828	junction_14	55.5342719707551	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	-8	True	NA	26	True	AATAAA	-20	NA	31739289	31801800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_8726.known	chr1	-	625	2	FSM	ENSG00000223804.5	ENST00000617318.4	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	1161	False	NA	NA	False	AATAAA	-31	NA	120341839	120267336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_120267839_120341716
transcript_87268.nic	chr20	+	1867	12	ISM	ENSG00000088325.16	ENST00000300403.11	3473	18	-49	17983	-30	-17983	5prime_fragment	FALSE	canonical	3	846	junction_9	53.3502383676427	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGAAAAGAATCCAGGAG	155	False	NA	-19	True	NA	NA	NA	31739240	31783817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704
transcript_87269.nic	chr20	+	1501	10	ISM	ENSG00000088325.16	ENST00000340513.4	3605	19	-30	22932	-30	-22927	5prime_fragment	FALSE	canonical	3	846	junction_9	32.8411816151085	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTTGATGAAACAGTT	155	False	NA	NA	False	AAGAAA	-2	NA	31739240	31778873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812
transcript_8727.known	chr1	-	715	3	FSM	ENSG00000223804.5	ENST00000616141.4	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	1129	False	NA	NA	False	AATAAA	-34	NA	120341871	120267333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_120267839_120340755_120340811_120341716
transcript_87274.nic	chr20	+	824	5	ISM	ENSG00000088325.16	ENST00000340513.4	3605	19	-30	35213	-30	-35208	5prime_fragment	FALSE	canonical	3	849	junction_1	23.425413550245	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTGGAACAATCCATTC	155	False	NA	NA	False	AAAAAG	-5	NA	31739240	31766592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555
transcript_87277.nic	chr20	+	620	2	ISM	ENSG00000088325.16	ENST00000340513.4	3605	19	-30	59026	-30	-59021	5prime_fragment	FALSE	canonical	3	849	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCACCCACTATCCCA	155	False	NA	NA	False	AAAAAG	-5	NA	31739240	31742779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_31739622_31742540
transcript_87278.known	chr20	-	1302	1	FSM	ENSG00000179772.8	ENST00000375978.5	1302	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGCTTGCCTGATGGC	-2	True	NA	NA	False	AATAAA	-16	NA	31845604	31844302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31844300_31845600
transcript_87281.known	chr20	-	1957	5	FSM	ENSG00000088356.6	ENST00000202017.6	1957	5	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	31.1317763707759	1485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTTGTCCAGTGTGA	-22	True	NA	-2	True	AATAAA	-26	NA	31952046	31944336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
transcript_87286.known	chr20	+	651	1	FSM	ENSG00000278012.1	ENST00000616850.1	651	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGCCTTTTTACCTGC	1076	False	NA	8	True	ATTAAA	-23	NA	31970180	31970831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31970200_31970800
transcript_87292.known	chr20	+	2101	13	FSM	ENSG00000101336.18	ENST00000375852.5	2101	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	4.58863329931207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGGTTTTCCTGTCCTTC	-3	True	NA	17	True	AATAAA	-30	NA	32052241	32101856	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32052487_32071661_32071783_32073318_32073362_32073715_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
transcript_87293.known	chr20	+	1742	13	FSM	ENSG00000101336.18	ENST00000518730.5	1742	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	4.58863329931207	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGACCAGGGCAGGG	16	True	NA	NA	False	NA	NA	NA	32052260	32101519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32052487_32071661_32071783_32073318_32073362_32073718_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
transcript_87295.nic	chr20	+	570	2	ISM	ENSG00000101336.18	ENST00000262651.4	2160	14	-47	47356	-2	-18096	5prime_fragment	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	639	False	NA	NA	False	NA	NA	NA	32052194	32054493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_32052487_32054215
transcript_87299.known	chr20	+	3768	18	FSM	ENSG00000101337.16	ENST00000398022.7	3768	18	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	39.534225897329	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	-12	True	NA	20	True	AATAAA	-17	NA	32109713	32167256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_873.known	chr1	-	2677	20	FSM	ENSG00000248333.9	ENST00000407249.7	2677	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	50.9573717887038	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTTTCTCCGTGA	-25	True	NA	NA	False	ATTAAA	-25	NA	1659012	1635586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642346_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_87301.nnic	chr20	+	2219	18	NNC	ENSG00000101337.16	novel	3768	18	NA	NA	-130	-1	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_17	69.294367322031	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTCTTGAATCTCA	-9	True	NA	19	True	AATAAA	-16	NA	32109583	32167255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32166972
transcript_87307.known	chr20	-	3884	1	FSM	ENSG00000235217.6	ENST00000565928.1	3884	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATCATGTCACTTCCC	-17	True	NA	-23	True	AATAAA	-27	NA	32190360	32186476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_32186500_32190400
transcript_87308.known	chr20	+	5226	7	FSM	ENSG00000101346.14	ENST00000375749.8	5226	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	7.36545993132812	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACATTTTACCAGTCTAG	-21	True	NA	22	True	AATAAA	-42	NA	32207879	32238658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
transcript_87310.known	chr20	+	6116	9	FSM	ENSG00000101350.8	ENST00000375712.4	6116	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13.7658998979362	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTCCTCATAAATGACTA	-1	True	NA	23	True	AATAAA	-31	NA	32277650	32335011	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32277766_32309712_32311182_32316217_32316320_32316526_32316650_32316755_32316875_32326770_32326885_32327555_32327662_32330140_32330320_32331222
transcript_87312.known	chr20	+	609	6	FSM	ENSG00000171456.21	ENST00000645035.1	609	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.5213633723318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGTAAGCTTGGGAGT	101	False	NA	15	True	AATAAA	-15	NA	32359087	32372233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32359335_32366383_32366467_32367726_32367730_32369014_32369124_32371777_32371875_32372163
transcript_87313.known	chr20	+	495	5	FSM	ENSG00000171456.21	ENST00000497249.6	495	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.79422863405995	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGCTTGGGAGTGGTCT	123	False	NA	20	True	AATAAA	-20	NA	32359109	32372238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32359335_32366383_32366467_32367726_32367730_32369014_32369124_32372163
transcript_87314.known	chr20	-	5991	8	FSM	ENSG00000197183.15	ENST00000359676.9	5991	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	10.9339389246585	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGCTTCCACTGTGTC	-1	True	NA	NA	False	AATAAA	-20	NA	32483471	32443058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_32447817_32452235_32452438_32452883_32453007_32453303_32453496_32453575_32453762_32456117_32456396_32474600_32474743_32483361
transcript_87317.nnic	chr20	-	725	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	7939	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	23.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	9524	False	NA	NA	False	AATAAA	-19	NA	32475532	32464779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32475287
transcript_87318.nnic	chr20	-	579	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	1693	False	NA	NA	False	AATAAA	-19	NA	32483363	32464779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32483264
transcript_87319.known	chr20	-	701	3	FSM	ENSG00000197183.15	ENST00000326071.8	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	0.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	1474	False	NA	NA	False	AATAAA	-19	NA	32483582	32464779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_32465118_32474600_32474743_32483361
transcript_87321.nnic	chr20	-	533	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	-896	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	25.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	9773	False	NA	NA	False	AATAAA	-19	NA	32484478	32464779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32484425
transcript_87322.nnic	chr20	-	539	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	-1010	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	24.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	9659	False	NA	NA	False	AATAAA	-19	NA	32484592	32464779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32484533
transcript_87323.nnic	chr20	-	715	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	-1772	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	24.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	8897	False	NA	NA	False	AATAAA	-19	NA	32485354	32464779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32485119
transcript_87327.known	chr20	-	1343	9	FSM	ENSG00000149600.12	ENST00000446419.6	1343	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	124.036033071039	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGGATCCAGTTG	11	True	NA	58	True	AATAAA	-13	NA	32743455	32702702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728140_32743307
transcript_87330.nnic	chr20	-	1208	7	NIC	ENSG00000149600.12	novel	1362	9	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	173.696094755562	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGATCCAGTTGTCTT	12	True	NA	62	True	AATAAA	-17	NA	32743454	32702698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_32703459_32704022_32704072_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728143_32743307
transcript_87352.known	chr20	+	2562	7	FSM	ENSG00000101367.9	ENST00000375571.6	2562	7	0	0	0	0	multi-exon	FALSE	canonical	3	1281	junction_3	132.653265654822	3784	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTTCTGAAATTTGT	-14	True	NA	22	True	AATAAA	-20	NA	32819953	32850405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32820029_32825924_32826049_32833716_32833863_32836633_32836842_32839734_32839857_32846617_32846771_32848671
transcript_87353.known	chr20	+	2131	1	FSM	ENSG00000260257.2	ENST00000569087.2	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGGTTCTGTGATT	507	False	NA	10	True	AATAAA	-20	NA	32856620	32858751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32856600_32858800
transcript_87354.nic	chr20	+	1245	3	ISM	ENSG00000215529.13	ENST00000400522.9	4197	27	100624	0	42487	0	3prime_fragment	FALSE	canonical	2	2	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCTGTGTGTTCCTTGC	NA	False	NA	NA	False	AATAAA	-35	NA	32959546	32961845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_32959983_32960062_32960162_32961135
transcript_87355.known	chr20	+	1075	9	FSM	ENSG00000198183.12	ENST00000354297.9	1075	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.927024810886958	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGGGCCTTGTCATCCTT	1	True	NA	NA	False	AATAAA	-18	NA	33235995	33243306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_33236051_33237696_33237872_33238054_33238215_33239802_33239911_33240232_33240386_33241384_33241470_33242055_33242120_33242486_33242562_33243106
transcript_87359.known	chr20	-	1930	14	FSM	ENSG00000101391.21	ENST00000473997.5	1930	14	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_13	91.3401212582909	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	3	True	NA	-15	True	ATTAAA	-21	NA	33401517	33358838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396937_33401427
transcript_87381.known	chr20	-	840	6	FSM	ENSG00000101391.21	ENST00000482967.5	840	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	150.229158288263	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	16	True	NA	-15	True	ATTAAA	-21	NA	33401504	33358838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33401427
transcript_87384.known	chr20	-	2080	14	FSM	ENSG00000101391.21	ENST00000346416.7	2080	14	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_13	37.771502360014	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	1	True	NA	-15	True	ATTAAA	-21	NA	33401519	33358838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_87385.known	chr20	-	1891	13	FSM	ENSG00000101391.21	ENST00000339269.5	1891	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	95.19526715593	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	7612	False	NA	-15	True	ATTAAA	-21	NA	33401561	33358838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_87386.known	chr20	-	758	6	FSM	ENSG00000101391.21	ENST00000461356.5	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	118.448976356911	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCGTCAGGTTAGCTGT	7687	False	NA	NA	False	NA	NA	NA	33401486	33379460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33401427
transcript_87387.known	chr20	-	827	9	FSM	ENSG00000125967.17	ENST00000478237.5	827	9	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_8	34.3545393652717	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGACTTGGGCCTGGTGG	1602	False	NA	-93	True	NA	NA	NA	33662237	33657729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33662211
transcript_87389.known	chr20	-	438	3	FSM	ENSG00000125967.17	ENST00000473892.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGGATTTTTGTCTGTT	3643	False	NA	NA	False	AATAGA	-39	NA	33670765	33669142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33669473_33669686_33669713_33670683
transcript_87391.nnic	chr20	-	1692	5	NNC	ENSG00000101417.12	novel	5690	4	NA	NA	-105	1353	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	6.26498204307083	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAGAATCAGAGAGGA	NA	False	NA	NA	False	AATAAA	-16	NA	33720424	33705915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_33706171_33707124_33707970_33710554_33710754_33714673_33714737_33720094
transcript_87393.known	chr20	-	5690	4	FSM	ENSG00000101417.12	ENST00000409299.8	5690	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4.49691252107735	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTGTATATATTTT	-42	True	NA	NA	False	AATAAA	-17	NA	33720310	33702757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33707970_33710554_33710754_33714673_33714737_33720094
transcript_87395.known	chr20	-	989	3	FSM	ENSG00000101417.12	ENST00000344022.7	989	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCTAGATTCCCAC	NA	False	NA	NA	False	TTTAAA	-38	NA	33720319	33707268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33707970_33714673_33714737_33720094
transcript_87397.known	chr20	-	377	1	FSM	ENSG00000230837.1	ENST00000413849.1	377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCTGATCATCAAATACCT	NA	False	NA	NA	False	NA	NA	NA	33752543	33752166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33752200_33752500
transcript_874.known	chr1	-	5948	9	FSM	ENSG00000189339.12	ENST00000611123.1	5948	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	20.1645573965808	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTGTTTTCTTCCTT	93	False	NA	-2	True	AATAAA	-13	NA	1692728	1661478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
transcript_87403.known	chr20	-	660	3	FSM	ENSG00000285230.3	ENST00000440595.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCATTTATTTGTCT	59	False	NA	-8	True	NA	NA	NA	33994355	33992487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33992906_33993059_33993151_33994204
transcript_87404.known	chr20	-	610	2	FSM	ENSG00000285230.3	ENST00000432859.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCCCAAGGTGTGCA	5	True	NA	NA	False	AATAAA	-16	NA	33993124	33983051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33983597_33993059
transcript_87418.known	chr20	-	2556	9	FSM	ENSG00000125977.7	ENST00000374980.3	2556	9	0	0	0	0	multi-exon	FALSE	canonical	3	3441	junction_8	398.939042179379	8662	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACGCTCCATTGCTTTTG	-14	True	NA	-10	True	AATAAA	-26	NA	34112243	34088308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
transcript_87423.nnic	chr20	-	1821	11	NNC	ENSG00000101444.13	novel	2150	10	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	303	junction_1	447.386812501218	3267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	8416	False	NA	-4	True	AATAAA	-18	NA	34303402	34280267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_34280651_34281026_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_8743.nnic	chr1	-	849	4	NNC	ENSG00000275585.2	novel	553	3	NA	NA	-202	1517	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.88561808316413	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	NA	False	NA	NA	False	AATAAA	-16	NA	121052369	121028074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_121028292_121036413_121036466_121037561_121037798_121052025
transcript_87435.known	chr20	-	2150	10	FSM	ENSG00000101444.13	ENST00000217426.7	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_6	121.566117761712	8460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-2	True	NA	-4	True	AATAAA	-18	NA	34303355	34280267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_8744.nnic	chr1	+	720	3	NNC	ENSG00000226067.7	novel	692	3	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	956	False	NA	NA	False	AATAAA	-28	NA	120913106	120953460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_120913451_120952438_120952574_120953219
transcript_87444.known	chr20	-	2211	9	FSM	ENSG00000101444.13	ENST00000480653.5	2211	9	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_5	128.508693772056	1930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTTGAGCCTTTATT	8501	False	NA	-6	True	AATAAA	-16	NA	34303317	34280269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34281166_34285439_34285635_34290331_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_8745.known	chr1	+	692	3	FSM	ENSG00000226067.7	ENST00000613486.2	692	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	19.5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1033	False	NA	NA	False	AATAAA	-28	NA	120913183	120953460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_120913451_120952438_120952626_120953222
transcript_8746.known	chr1	+	821	3	FSM	ENSG00000226067.7	ENST00000621058.5	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	5	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	-8	True	NA	NA	False	AATAAA	-31	NA	120913220	120953463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_120913451_120952438_120952786_120953219
transcript_87462.known	chr20	+	4484	26	FSM	ENSG00000078747.16	ENST00000670516.1	4484	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.2750540354878	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTCCATATGGAAAAAAGA	-11	True	NA	-84	True	NA	NA	NA	34363279	34509407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34397207_34397322_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_87463.known	chr20	+	6743	25	FSM	ENSG00000078747.16	ENST00000374864.10	6743	25	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	6.73287436554569	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAAATCTATAAAT	-18	True	NA	NA	False	NA	NA	NA	34363272	34511773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_87468.known	chr20	+	703	6	FSM	ENSG00000078747.16	ENST00000486883.5	703	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	18.10635247641	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGACTACCTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	34363240	34413879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34363350_34369393_34369471_34393769_34393882_34408650_34408793_34412514_34412640_34413741
transcript_8747.nnic	chr1	+	1051	3	NNC	ENSG00000226067.7	novel	821	3	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	16.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	956	False	NA	NA	False	AATAAA	-28	NA	120913106	120953460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_120913451_120952438_120952905_120953219
transcript_87471.nic	chr20	+	624	3	ISM	ENSG00000125971.17	ENST00000374846.3	1044	4	9807	4	9807	-4	3prime_fragment	FALSE	canonical	3	842	junction_2	2.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACCCGTCTGTTGTGTCT	-1	True	NA	23	True	ACTAAA	-14	NA	34526261	34540954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_34526344_34534627_34534796_34540580
transcript_87472.known	chr20	+	205	2	FSM	ENSG00000078747.16	ENST00000479215.1	205	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGAGAGCAGTGTTG	4	True	NA	NA	False	NA	NA	NA	34363294	34369543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34363350_34369393
transcript_87479.known	chr20	+	1044	4	FSM	ENSG00000125971.17	ENST00000374846.3	1044	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	398.106350949927	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	43	False	NA	27	True	ACTAAA	-18	NA	34516454	34540958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34516877_34526267_34526344_34534627_34534796_34540580
transcript_87481.known	chr20	+	662	4	FSM	ENSG00000125971.17	ENST00000357156.7	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	110.091880818806	11889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	10	True	NA	27	True	ACTAAA	-18	NA	34516421	34540958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34516462_34526267_34526344_34534627_34534796_34540580
transcript_87482.known	chr20	+	1053	5	FSM	ENSG00000125971.17	ENST00000480759.1	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	372.317992447316	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	2	True	NA	27	True	ACTAAA	-18	NA	34516413	34540958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34516462_34526267_34526344_34529851_34530235_34534627_34534796_34540580
transcript_87483.known	chr20	+	1464	3	FSM	ENSG00000125971.17	ENST00000300469.13	1464	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	305.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTATCACTTGAA	32	False	NA	NA	False	ATTAAA	-20	NA	34516443	34531221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34516462_34526267_34526344_34529851
transcript_87488.known	chr20	+	961	5	FSM	ENSG00000101460.13	ENST00000374837.7	961	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.2004901941153	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	9	True	NA	16	True	AATAAA	-22	NA	34546853	34560345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34546917_34549904_34550030_34559207_34559264_34559346_34559454_34559735
transcript_87489.known	chr20	-	1639	12	FSM	ENSG00000101464.11	ENST00000217446.8	1639	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_9	13.3627086876529	2285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	9	True	NA	-12	True	AATAAA	-22	NA	34677092	34560541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_87490.known	chr20	-	4082	14	FSM	ENSG00000198646.14	ENST00000612493.4	4082	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	16.5600931878577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGGTGATCAGCTCT	8	True	NA	0	True	AATAAA	-42	NA	34825630	34714774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34746806_34746929_34749402_34750520_34754721_34754869_34757219_34758105_34758804_34758934_34768463_34768587_34776292_34776449_34782120_34782405_34792449_34792564_34825471
transcript_87492.nic	chr20	-	1162	5	ISM	ENSG00000198646.14	ENST00000374796.6	9311	16	80961	1	-7710	0	3prime_fragment	FALSE	canonical	3	47	junction_4	13.3603892158874	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGGGTGATCAGCTCT	6234	False	NA	0	True	AATAAA	-42	NA	34740678	34714774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_34715366_34727258_34727408_34732558_34732596_34736689_34736759_34740362
transcript_87494.known	chr20	-	2638	15	FSM	ENSG00000131067.17	ENST00000336431.10	2638	15	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	30.0170869706586	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTCTGGTTTAATTT	-15	True	NA	-5	True	ATTAAA	-18	NA	34872856	34844719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
transcript_87503.nic	chr20	-	1523	4	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	-12	15930	-12	2164	5prime_fragment	FALSE	canonical	3	142	junction_3	3.74165738677394	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGCAGGGG	4	True	NA	NA	False	NA	NA	NA	34872868	34860649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_34861563_34862813_34862966_34863312_34863549_34872646
transcript_87504.nic	chr20	-	1870	3	NIC	ENSG00000131067.17	novel	2638	15	NA	NA	-12	2164	intron_retention	FALSE	canonical	3	142	junction_2	4.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGGCAGGGG	4	True	NA	NA	False	NA	NA	NA	34872868	34860649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_34861563_34862813_34863549_34872646
transcript_87505.known	chr20	+	567	4	FSM	ENSG00000131069.20	ENST00000480274.1	567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.4276973520408	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCTGGTGAAAAGGGG	-3	True	NA	NA	False	GGGGCT	-23	NA	34876579	34913503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34876748_34882793_34882990_34913095_34913188_34913392
transcript_87507.known	chr20	-	3138	19	FSM	ENSG00000100991.12	ENST00000451813.6	3138	19	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_11	168.993936628756	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-7	True	NA	-15	True	AATAAA	-44	NA	35092807	35002403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021333_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_87508.known	chr20	-	3162	19	FSM	ENSG00000100991.12	ENST00000252015.3	3162	19	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_11	116.141264027375	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-7	True	NA	-15	True	AATAAA	-44	NA	35092807	35002403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_87513.known	chr20	-	1437	13	FSM	ENSG00000100983.12	ENST00000643443.1	1437	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	69.2308437202828	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATCCTCTGTATTTGT	25	True	NA	NA	False	NA	NA	NA	34955755	34928805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946052_34951723_34951861_34955726
transcript_87514.known	chr20	-	1909	13	FSM	ENSG00000100983.12	ENST00000651619.1	1909	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	36.0262250157977	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTCCTTACTTCGTG	-26	True	NA	-2	True	AATAAA	-19	NA	34955806	34928431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_87515.known	chr20	-	1940	13	FSM	ENSG00000100983.12	ENST00000643188.1	1940	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	74.4533784025651	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTCCCTAATTCTGCC	NA	False	NA	-49	True	NA	NA	NA	34956027	34928478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955869
transcript_87516.known	chr20	-	2131	13	FSM	ENSG00000100983.12	ENST00000642498.1	2131	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	72.8169317916895	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTCTGCCTTAAAT	-3	True	NA	-43	True	NA	NA	NA	34955783	34928472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34929238_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_87531.known	chr20	-	1554	10	FSM	ENSG00000100983.12	ENST00000646735.1	1554	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	79.7794800189796	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-5	True	NA	-3	True	AATAAA	-18	NA	34955785	34928432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34945952_34946099_34951723_34951861_34955726
transcript_87532.known	chr20	-	1540	10	FSM	ENSG00000100983.12	ENST00000642538.1	1540	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	83.7413713999873	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCTGCCTCCATTTCTA	-8	True	NA	NA	False	GGGGCT	-18	NA	34955788	34928974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_87537.known	chr20	-	1756	10	FSM	ENSG00000088298.13	ENST00000374491.3	1756	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	65.665820637528	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	0	True	NA	-23	True	AATAAA	-19	NA	35147319	35115363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35147151
transcript_87550.known	chr20	-	1884	11	FSM	ENSG00000088298.13	ENST00000374492.8	1884	11	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	26.6315602246658	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-17	True	NA	-23	True	AATAAA	-19	NA	35147336	35115363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_87553.known	chr20	-	1054	7	FSM	ENSG00000242372.9	ENST00000675032.1	1054	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	572.551429034012	2373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	7706	False	NA	-12	True	ATTAAA	-32	NA	35284717	35278906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284696
transcript_87562.known	chr20	+	1349	4	FSM	ENSG00000101000.6	ENST00000216968.5	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	2.86744175568088	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCTCCTCCACTTTG	-11	True	NA	14	True	AATAAA	-19	NA	35172071	35177362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35172225_35174701_35174954_35176167_35176447_35176697
transcript_87565.known	chr20	-	798	4	FSM	ENSG00000242372.9	ENST00000440766.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	767.053380729717	2219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	9	True	NA	-16	True	ATTAAA	-28	NA	35284523	35278910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284380
transcript_87569.known	chr20	+	4376	9	FSM	ENSG00000125966.10	ENST00000246186.8	4376	9	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	14.0618055384079	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCATTTCCCTGGGAT	-1	True	NA	13	True	AATAAA	-14	NA	35226689	35276998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35226985_35246839_35246989_35251904_35252022_35254449_35254755_35263790_35263953_35267204_35267420_35269759_35269899_35271568_35271836_35274271
transcript_8757.nnic	chr1	-	932	3	NNC	ENSG00000275585.2	novel	553	3	NA	NA	-337	1517	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1.5	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	NA	False	NA	NA	False	AATAAA	-16	NA	121052504	121028074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_121028292_121037561_121037798_121052025
transcript_87570.known	chr20	-	1069	7	FSM	ENSG00000242372.9	ENST00000374450.8	1069	7	0	0	0	0	multi-exon	FALSE	canonical	3	1248	junction_6	144.77731943306	8290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATGTGATGTTTGGG	1	True	NA	-23	True	ATTAAA	-21	NA	35284772	35278917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
transcript_87571.known	chr20	-	932	6	FSM	ENSG00000242372.9	ENST00000447927.6	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	546.285273460671	2924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	7619	False	NA	-16	True	ATTAAA	-28	NA	35284804	35278910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284262_35284380_35284493_35284725
transcript_87572.known	chr20	-	1252	6	FSM	ENSG00000242372.9	ENST00000374436.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1371	junction_3	110.694895997964	4185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	7708	False	NA	-16	True	ATTAAA	-28	NA	35284715	35278910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380
transcript_87573.known	chr20	-	1017	5	FSM	ENSG00000242372.9	ENST00000374443.7	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	598.255380251611	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	3	True	NA	-16	True	ATTAAA	-28	NA	35284770	35278910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284493_35284725
transcript_87574.known	chr20	-	453	3	FSM	ENSG00000242372.9	ENST00000462894.1	453	3	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	635.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGACAGTGGCCGACCA	7721	False	NA	NA	False	AAGAAA	-33	NA	35284702	35280073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35280119_35284175_35284262_35284380
transcript_8758.known	chr1	+	1261	2	FSM	ENSG00000226067.7	ENST00000659101.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	1061	False	NA	NA	False	AATAAA	-28	NA	120913211	120953460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_120913451_120952438
transcript_87584.known	chr20	-	2267	10	FSM	ENSG00000101019.22	ENST00000374385.10	2267	10	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	24.4621148253456	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	8	True	NA	-15	True	AATAAA	-20	NA	35411973	35302577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_87585.known	chr20	-	1987	7	FSM	ENSG00000101019.22	ENST00000457259.5	1987	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	84.1462021325581	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	1257	False	NA	-3	True	AATAAA	-32	NA	35411958	35302565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35394091_35394197_35411939
transcript_87586.known	chr20	-	1035	7	FSM	ENSG00000101019.22	ENST00000453855.5	1035	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	94.8784309875889	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTTAGAAACTTGCCTG	1255	False	NA	6	True	ATTAAA	-43	NA	35411960	35303432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314708_35381983_35382026_35384037_35384134_35394091_35394197_35411939
transcript_87587.known	chr20	-	3638	7	FSM	ENSG00000101019.22	ENST00000397554.5	3638	7	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	22.573337271116	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGGAATTCTTTTTTA	7	True	NA	1	True	AATAAA	-34	NA	35411974	35344109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_87588.known	chr20	-	2188	9	FSM	ENSG00000101019.22	ENST00000349714.9	2188	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	84.2309882109904	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	18	True	NA	-3	True	AATAAA	-32	NA	35411963	35302565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35381925_35382026_35384037_35384134_35394091_35394197_35411939
transcript_87589.known	chr20	-	2133	8	FSM	ENSG00000101019.22	ENST00000374380.6	2133	8	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	80.8596667955398	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	1184	False	NA	-3	True	AATAAA	-32	NA	35412031	35302565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35394091_35394197_35411939
transcript_87590.nic	chr20	+	1485	10	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	10.9657153702003	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	-26	True	NA	7	True	AATAAA	-20	NA	35455148	35470132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_35455243_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_87593.known	chr20	+	1419	10	FSM	ENSG00000126001.16	ENST00000397524.5	1419	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	9.59681016963964	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	126	False	NA	7	True	AATAAA	-20	NA	35455723	35470132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_87596.known	chr20	+	15434	35	FSM	ENSG00000126001.16	ENST00000397527.6	15434	35	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.7811571663098	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCATAATATTTCCAGTTT	0	True	NA	NA	False	AATAAA	-16	NA	35455597	35519280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889_35469987_35472049_35472152_35472672_35472832_35473373_35473553_35473869_35474053_35475501_35475647_35476448_35476596_35477870_35478102_35479230_35479425_35479645_35479774_35479975_35480146_35490636_35490805_35491211_35491347_35493428_35493573_35494523_35494658_35496576_35496716_35497718_35498068_35498594_35498717_35500048_35500170_35501844_35501967_35502389_35505006_35507737_35507852_35508034_35508191_35508942_35509045_35509997_35510055_35511362
transcript_8760.known	chr1	+	7091	10	FSM	ENSG00000171943.12	ENST00000367123.8	7091	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	85.0790482107343	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAACAGAAATTGTATA	-5	True	NA	NA	False	AATAAA	-21	NA	121184974	121392874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382700_121382926_121386505_121386608_121387633
transcript_87603.known	chr20	+	1302	13	FSM	ENSG00000125991.21	ENST00000348547.7	1302	13	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_1	98.3413485433942	8901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	10	True	NA	35	True	GATAAA	-24	NA	35542077	35557634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_87604.known	chr20	+	1357	14	FSM	ENSG00000125991.21	ENST00000357394.8	1357	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	389.310937320235	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	NA	False	NA	35	True	GATAAA	-24	NA	35542037	35557634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35554371_35554387_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_87605.known	chr20	+	601	5	FSM	ENSG00000125991.21	ENST00000411577.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	415.830794915432	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGGTCAGGAATTTAG	48	False	NA	NA	False	AATAAA	-18	NA	35542115	35543909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35543657
transcript_87606.known	chr20	+	728	6	FSM	ENSG00000125991.21	ENST00000461043.6	728	6	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	43.1712867540452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGATCTGCACTAGCT	124	False	NA	NA	False	NA	NA	NA	35542191	35548865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807
transcript_87607.known	chr20	+	781	8	FSM	ENSG00000125991.21	ENST00000496172.5	781	8	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_5	64.0596023486036	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGAGAGGTGAGTCAGGG	6	True	NA	NA	False	NA	NA	NA	35542442	35556262	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206
transcript_87609.nic	chr20	+	1507	11	ISM	ENSG00000061656.11	ENST00000679710.1	1542	12	837	45	-214	0	3prime_fragment	FALSE	canonical	1	2	junction_1	4.73814309619285	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	781	False	NA	33	True	ATTAAA	-27	NA	35616665	35621049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_35617241_35617519_35617587_35617778_35617841_35618086_35618131_35618449_35618476_35618611_35618721_35618922_35618999_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_87614.known	chr20	-	2147	18	FSM	ENSG00000214078.13	ENST00000352393.8	2147	18	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_15	259.563834312573	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTTGTGTGTTTTTAGG	47	False	NA	-2	True	AATAAA	-30	NA	35664886	35626030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35655201_35655345_35658929_35658983_35664759
transcript_87633.known	chr20	-	1952	16	FSM	ENSG00000214078.13	ENST00000397443.7	1952	16	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_15	125.553813163918	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	4	True	NA	-15	True	AATAAA	-17	NA	35664900	35626043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664759
transcript_87645.known	chr20	-	1695	16	FSM	ENSG00000214078.13	ENST00000397442.5	1695	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	231.755292400315	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGACCAGTGAAGACC	58	False	NA	-37	True	NA	NA	NA	35664875	35626065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626734_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_8766.known	chr1	-	748	5	FSM	ENSG00000188610.12	ENST00000452190.2	748	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	92.8156775550338	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATATATATGATATAC	43	False	NA	NA	False	GATAAA	-6	NA	121184292	121168734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337_121183470_121183980
transcript_87679.known	chr20	-	3008	13	FSM	ENSG00000244005.13	ENST00000374092.9	3008	13	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_9	33.1620599815847	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGGCTGGGTGTG	-4	True	NA	NA	False	ATTAAA	-19	NA	35699352	35668051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699191
transcript_87680.known	chr20	-	1956	13	FSM	ENSG00000244005.13	ENST00000397425.5	1956	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	44.1992804114376	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCACCTTCTATTTACT	-1	True	NA	-30	True	NA	NA	NA	35699349	35668982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_87687.known	chr20	-	1755	16	FSM	ENSG00000214078.13	ENST00000437340.5	1755	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	251.773672615352	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCCTAGGTTCCCTTG	NA	False	NA	-129	True	NA	NA	NA	35664956	35626251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626566_35626801_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_87692.known	chr20	+	288	3	FSM	ENSG00000125995.16	ENST00000397416.1	288	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1848.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCCAACTACATCTGTC	-3	True	NA	-54	True	NA	NA	NA	35699450	35700910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35699495_35699632_35699764_35700797
transcript_87693.known	chr20	-	5213	3	FSM	ENSG00000244462.8	ENST00000374104.7	5213	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	225	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTACTTTGTTATTT	4	True	NA	-8	True	ATTAAA	-17	NA	35664900	35650325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35658983_35664759
transcript_87695.known	chr20	-	583	3	FSM	ENSG00000244462.8	ENST00000431148.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	283.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAACATACAGACATTT	NA	False	NA	NA	False	NA	NA	NA	35664956	35654892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35658983_35664878
transcript_87696.known	chr20	-	6646	3	FSM	ENSG00000244462.8	ENST00000374114.8	6646	3	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_2	63.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTACTTTACTGAGCT	4	True	NA	1	True	AATAAA	-32	NA	35664900	35648924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35659015_35664759
transcript_87697.known	chr20	-	1068	3	FSM	ENSG00000244462.8	ENST00000424458.5	1068	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	256.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTGAAGCCACTCCC	15	True	NA	NA	False	NA	NA	NA	35664889	35654449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35659015_35664801
transcript_877.known	chr1	-	2199	5	FSM	ENSG00000189339.12	ENST00000481276.1	2199	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	25.1047804212664	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTTGGGCGTGGTGGCT	112	False	NA	NA	False	NA	NA	NA	1692709	1670424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
transcript_87701.known	chr20	-	5332	2	FSM	ENSG00000244462.8	ENST00000359646.1	5332	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTGTATCTGAGATT	16	True	NA	-2	True	ATTAAA	-22	NA	35664888	35650141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35664759
transcript_87702.known	chr20	-	625	2	FSM	ENSG00000214078.13	ENST00000462352.5	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	1012	junction_1	0	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	4172	False	NA	-15	True	AATAAA	-17	NA	35626853	35626043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626566
transcript_87703.known	chr20	-	1070	11	FSM	ENSG00000214078.13	ENST00000414664.5	1070	11	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_10	141.783250068547	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACTACCTGAGTCCAACA	-12	True	NA	NA	False	NA	NA	NA	35664916	35630982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664759
transcript_87704.known	chr20	+	366	3	FSM	ENSG00000125995.16	ENST00000374077.8	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1807	junction_1	954.5	25537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	3	True	NA	16	True	AATAAA	-17	NA	35699404	35700980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35699457_35699632_35699764_35700797
transcript_87705.known	chr20	+	496	2	FSM	ENSG00000125995.16	ENST00000336695.4	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	3716	junction_1	0	5120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	-3	True	NA	16	True	AATAAA	-17	NA	35699450	35700980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35699764_35700797
transcript_87706.known	chr20	+	350	3	FSM	ENSG00000125995.16	ENST00000374072.5	350	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	898.5	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTGTCCCTCTCTTA	40	False	NA	14	True	AATAAA	-15	NA	35699441	35700978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35699457_35699632_35699764_35700774
transcript_87707.known	chr20	-	1795	16	FSM	ENSG00000214078.13	ENST00000401607.6	1795	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	249.724167833232	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTAGCACTTTGTAT	56	False	NA	-36	True	NA	NA	NA	35664877	35626158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626566_35626827_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_87708.known	chr20	-	748	8	FSM	ENSG00000214078.13	ENST00000439806.6	748	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	283.437283852268	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCTGCAGGCAGTCCCG	1	True	NA	NA	False	NA	NA	NA	35664932	35631511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664878
transcript_8772.known	chr1	-	2396	4	FSM	ENSG00000188610.12	ENST00000369390.7	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	31.8468557666565	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAGGCTAATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121184340	121167645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337
transcript_87722.known	chr20	-	2883	18	FSM	ENSG00000131051.24	ENST00000403542.6	2883	18	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	371.052118630907	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	13	False	NA	-8	True	AATAAA	-17	NA	35742274	35703610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_87723.known	chr20	-	2831	17	FSM	ENSG00000131051.24	ENST00000361162.10	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_5	260.330919216293	3416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGATCTTCATTTTTC	NA	False	NA	-7	True	AATAAA	-18	NA	35742312	35703609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_87724.known	chr20	-	4580	16	FSM	ENSG00000131051.24	ENST00000463004.5	4580	16	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_5	228.999524502175	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	4	True	NA	-6	True	AATAAA	-19	NA	35742236	35703608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35740888_35741940
transcript_87725.known	chr20	-	2792	18	FSM	ENSG00000131051.24	ENST00000338163.10	2792	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	483.358900807277	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	19	True	NA	-8	True	AATAAA	-17	NA	35742221	35703610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35707939_35707993_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_87726.known	chr20	-	2124	18	FSM	ENSG00000131051.24	ENST00000444878.5	2124	18	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	383.833675773035	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-8	True	NA	-3	True	AATAAA	-15	NA	35742248	35704325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_87727.known	chr20	-	3131	19	FSM	ENSG00000131051.24	ENST00000656873.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_18	450.266162712623	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTACTGTATTAAGGGG	21	False	35742287	NA	False	ATTAAA	-10	NA	35742266	35703223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940_35742114_35742244
transcript_87728.known	chr20	-	869	4	FSM	ENSG00000131051.24	ENST00000463098.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	564.443285213158	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATTCCTGTTCCCTTT	13	True	NA	NA	False	AGTAAA	-28	NA	35742227	35739102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35739548_35740524_35740598_35740823_35740888_35741940
transcript_87729.known	chr20	-	861	3	FSM	ENSG00000131051.24	ENST00000461849.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	481	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAATTAGGCCCTAC	2	True	NA	NA	False	NA	NA	NA	35742238	35740098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35740598_35740823_35740888_35741940
transcript_8773.known	chr1	-	1773	4	FSM	ENSG00000188610.12	ENST00000355228.8	1773	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	86.259299015623	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	424	False	NA	NA	False	AATAAA	-18	NA	121183911	121167719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183457
transcript_87730.known	chr20	-	436	3	FSM	ENSG00000131051.24	ENST00000490354.5	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1658	junction_1	38	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGGCAAGGATCTACT	8264	False	NA	-23	True	GATAAA	-3	NA	35705399	35704399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224
transcript_87731.known	chr20	+	906	1	FSM	ENSG00000225357.3	ENST00000424137.2	906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGAAATTATGGAAAA	NA	False	NA	NA	False	AAAAAG	-12	NA	35752813	35753719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35752800_35753700
transcript_87734.known	chr20	+	1814	12	FSM	ENSG00000025293.17	ENST00000374000.8	1814	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	94.5670429898001	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	-11	True	NA	NA	False	AAAAAG	-14	NA	35772025	35913335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_87750.known	chr20	+	618	2	FSM	ENSG00000025293.17	ENST00000617560.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATACTTTGTCTCTTTCT	-4	True	NA	12	True	AATAAA	-22	NA	35772032	35775058	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35772080_35774487
transcript_87751.known	chr20	+	5879	18	FSM	ENSG00000025293.17	ENST00000374012.8	5879	18	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_10	29.2432821374929	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	-22	True	NA	7	True	AATAAA	-18	NA	35772014	35950370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
transcript_87752.known	chr20	+	1635	10	FSM	ENSG00000025293.17	ENST00000481202.5	1635	10	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	83.9052964087018	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	-11	True	NA	NA	False	AATAAA	-43	NA	35772025	35913316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_87755.known	chr20	-	771	2	FSM	ENSG00000171222.11	ENST00000305978.7	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGTGTGTCTCTT	-7	True	NA	-7	True	AATGAA	-21	NA	35954502	35953623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35954340_35954447
transcript_87756.nnic	chr20	+	590	2	NNC	ENSG00000149646.12	novel	559	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	175	False	NA	5	True	AATAAA	-17	NA	35954569	35955368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_35954754_35954962
transcript_87757.known	chr20	+	662	1	FSM	ENSG00000149646.12	ENST00000614708.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	-1	True	NA	5	True	AATAAA	-17	NA	35954706	35955368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35954700_35955400
transcript_87758.known	chr20	-	5401	1	FSM	ENSG00000260032.2	ENST00000565493.2	5401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	521	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCGTTGCTTGTAGAAT	7	False	NA	-5	True	AATAAA	-25	NA	36051018	36045617	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36045600_36051000
transcript_87760.known	chr20	+	2561	5	FSM	ENSG00000131043.13	ENST00000680247.1	2561	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	119.321781330988	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	18	True	NA	17	True	ATTAAA	-7	NA	36236477	36256921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236504_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_87761.known	chr20	+	3187	5	FSM	ENSG00000131043.13	ENST00000680639.1	3187	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	120.110365914021	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	3501	False	NA	17	True	ATTAAA	-7	NA	36236130	36256921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236783_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_87765.known	chr20	+	2417	4	FSM	ENSG00000131043.13	ENST00000320849.9	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	45.2842871939779	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	18	True	NA	29	True	ATTAAA	-19	NA	36236477	36256933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36255577
transcript_87766.known	chr20	+	2689	4	FSM	ENSG00000131043.13	ENST00000373932.3	2689	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	115.034294403403	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	25	True	NA	29	True	ATTAAA	-19	NA	36236484	36256933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236783_36239820_36240626_36244696_36244927_36255577
transcript_87768.known	chr20	+	1412	2	FSM	ENSG00000131043.13	ENST00000681771.1	1412	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTTCCTTTTTTTCTG	18	True	NA	NA	False	TTTAAA	-13	NA	36236477	36241206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236504_36239820
transcript_87773.known	chr20	+	3110	7	FSM	ENSG00000080845.19	ENST00000475894.5	3110	7	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	47.8249121507005	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	6	True	NA	27	True	AATAAA	-19	NA	36461337	36528637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_87775.known	chr20	+	2392	7	FSM	ENSG00000080845.19	ENST00000340491.8	2392	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	155.766295741052	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAAAATCACGAAACT	247	False	NA	-4	True	NA	NA	NA	36461746	36527239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36462600_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_87778.nic	chr20	+	534	2	ISM	ENSG00000080845.19	ENST00000491207.5	469	3	-43	2153	-31	-2153	5prime_fragment	FALSE	canonical	3	330	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTTGTCTCTCTATTT	105	False	NA	NA	False	NA	NA	NA	36461436	36497164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_36461511_36496704
transcript_87789.known	chr20	-	1207	5	FSM	ENSG00000232907.9	ENST00000439595.5	1207	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.12132034355964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGCGTGACTTGTTAT	120	False	NA	-1	True	AATAAA	-21	NA	36573275	36507701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36508275_36508811_36508826_36510879_36511033_36571440_36571544_36572911
transcript_878.known	chr1	+	400	2	FSM	ENSG00000272004.1	ENST00000607013.1	400	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCTCATCTTTCCAG	NA	False	NA	NA	False	ATTAAA	-22	NA	1659324	1662602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1659453_1662330
transcript_87806.known	chr20	-	664	3	FSM	ENSG00000232907.9	ENST00000656949.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCAGTCTCAGGTATTC	108	False	NA	NA	False	AATAAA	-17	NA	36573287	36563325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36563511_36571440_36571544_36572911
transcript_87807.known	chr20	+	2786	4	FSM	ENSG00000101335.10	ENST00000279022.7	2786	4	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	43.7442059655397	3410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGCAGCATATTTAACA	-6	True	NA	15	True	ATTAAA	-25	NA	36541518	36551447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36541562_36544858_36545069_36548031_36548194_36549076
transcript_87808.known	chr20	+	1024	3	FSM	ENSG00000101335.10	ENST00000346786.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	400	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTGTGTCTGTGGCT	1	True	NA	29	True	AATAGA	-18	NA	36541496	36549825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36541562_36544858_36545069_36549076
transcript_8781.known	chr1	-	1659	3	FSM	ENSG00000188610.12	ENST00000619376.4	1659	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	119.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAGGAAATAGAATAAATT	21	False	NA	NA	False	NA	NA	NA	121184314	121168231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_121168836_121181270_121181349_121183337
transcript_87812.known	chr20	+	918	5	FSM	ENSG00000259399.1	ENST00000558530.1	918	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	525.077137190337	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTCTCCATCGGGTG	19	True	NA	8	True	ATTAAA	-8	NA	36574552	36612384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36574636_36578740_36578967_36607714_36607819_36609600_36609731_36612009
transcript_87815.known	chr20	+	1170	5	FSM	ENSG00000101084.19	ENST00000483815.5	1170	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	529.512275589528	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	12	True	NA	36	True	AATAAA	-20	NA	36605788	36612557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36609600_36609731_36612009
transcript_87821.known	chr20	+	1044	4	FSM	ENSG00000101084.19	ENST00000492721.5	1044	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	518.868641051535	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	8	True	NA	36	True	AATAAA	-20	NA	36605784	36612557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36612009
transcript_87823.known	chr20	+	1069	4	FSM	ENSG00000101084.19	ENST00000344795.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	1074	junction_2	42.4970587217516	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	2	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36609600_36609731_36612009
transcript_87825.known	chr20	+	1059	4	FSM	ENSG00000101084.19	ENST00000373852.9	1059	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	519.074175816906	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	40	True	NA	36	True	AATAAA	-20	NA	36605816	36612557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36609600_36609759_36612009
transcript_87833.known	chr20	+	3432	3	FSM	ENSG00000118707.11	ENST00000373874.6	3432	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	198.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	21	False	NA	38	True	AATAAA	-28	NA	36573487	36593950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36573653_36578740_36578967_36590909
transcript_87835.known	chr20	+	3416	3	FSM	ENSG00000118707.11	ENST00000373872.9	3416	3	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	90	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	-22	True	NA	38	True	AATAAA	-28	NA	36573596	36593950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36573746_36578740_36578967_36590909
transcript_87840.known	chr20	+	3344	3	FSM	ENSG00000118707.11	ENST00000611732.4	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	123.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGGTTCTTGATTG	20	True	NA	33	True	AATAAA	-23	NA	36574553	36593945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36574636_36578740_36578967_36590909
transcript_87842.known	chr20	+	923	3	FSM	ENSG00000118707.11	ENST00000560025.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	203.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATCTGCCAAGAAGGGT	138	False	NA	NA	False	NA	NA	NA	36574671	36591429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36574849_36578740_36578967_36590909
transcript_87843.known	chr20	+	896	3	FSM	ENSG00000101084.19	ENST00000342422.3	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	553	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	-4	True	NA	36	True	AATAAA	-20	NA	36605821	36612557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36612009
transcript_87847.known	chr20	-	2971	16	FSM	ENSG00000101079.21	ENST00000349004.6	2971	16	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_7	18.7988179297411	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGCTGGTGTTATTT	-3	True	NA	-5	True	AATAAA	-22	NA	36746090	36651770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
transcript_87857.known	chr20	-	2075	12	FSM	ENSG00000149636.16	ENST00000473615.5	2075	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	71.3320717686646	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-29	True	NA	-3	True	ATTAAA	-19	NA	36773797	36751794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770975_36771114_36771194_36771424_36771474_36773661
transcript_87860.known	chr20	-	1922	11	FSM	ENSG00000149636.16	ENST00000373740.7	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	72.0108325184482	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	9935	False	NA	-3	True	ATTAAA	-19	NA	36773720	36751794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770978_36771424_36771474_36773661
transcript_87863.known	chr20	-	2441	11	FSM	ENSG00000149636.16	ENST00000426836.5	2441	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	65.371935874655	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAGTGTATAAACAA	17	True	NA	1	True	ATTAAA	-23	NA	36773751	36751790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773393
transcript_87864.known	chr20	-	2181	11	FSM	ENSG00000149636.16	ENST00000373750.9	2181	11	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	27.2376577553945	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	5	True	NA	-3	True	ATTAAA	-19	NA	36773763	36751794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
transcript_87877.known	chr20	-	2129	10	FSM	ENSG00000149636.16	ENST00000448110.6	2129	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	68.8930106293828	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	8	True	NA	-3	True	ATTAAA	-19	NA	36773760	36751794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36773661
transcript_87878.known	chr20	-	2447	10	FSM	ENSG00000149636.16	ENST00000480153.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	27.6409965695527	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-30	True	NA	-3	True	ATTAAA	-19	NA	36773798	36751794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771474_36773661
transcript_87879.known	chr20	-	1915	10	FSM	ENSG00000149636.16	ENST00000373734.8	1915	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	70.0238054759475	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	9837	False	NA	-3	True	ATTAAA	-19	NA	36773818	36751794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36771424_36771474_36773661
transcript_879.known	chr1	+	1017	7	FSM	ENSG00000215914.4	ENST00000234610.5	1017	7	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_2	19.6362759537885	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCGGCTGATAAAGCACTT	NA	False	NA	NA	False	GGGGCT	-3	NA	1699941	1701782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1700073_1700139_1700280_1700346_1700515_1700906_1701072_1701147_1701259_1701360_1701488_1701607
transcript_87903.known	chr20	-	4649	16	FSM	ENSG00000101347.11	ENST00000646673.2	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	21.0643458637259	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	7	True	NA	-28	True	AATAAA	-15	NA	36951708	36890228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_87904.known	chr20	-	4334	15	FSM	ENSG00000101347.11	ENST00000262878.5	4334	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	43.6004587131833	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCGCTTGAATCCGGGA	-1	True	NA	NA	False	NA	NA	NA	36951843	36890573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36893067_36897821_36897960_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_87905.known	chr20	-	1700	13	FSM	ENSG00000101347.11	ENST00000644688.2	1700	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	22.9533040468397	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTATTAACCACAAAAA	10	True	NA	NA	False	AATACA	-31	NA	36951705	36904021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_87910.known	chr20	+	1394	1	FSM	ENSG00000269846.1	ENST00000598590.1	1394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTCCATTATTTG	21	False	NA	16	True	AATAAA	-16	NA	37095784	37097178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37095800_37097200
transcript_87911.known	chr20	-	5686	22	FSM	ENSG00000080839.12	ENST00000373664.8	5686	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	6.79368788003525	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTCTGTATGACTGGA	1	True	NA	0	True	AATAAA	-29	NA	37095997	36996348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36998930_37003701_37003867_37007410_37007560_37018278_37018370_37020658_37020731_37022649_37022827_37032664_37032877_37035241_37035509_37040152_37040286_37044085_37044251_37047052_37047191_37055552_37055657_37056145_37056259_37061102_37061270_37062083_37062271_37065423_37065474_37066723_37066885_37066992_37067122_37067232_37067298_37067985_37068187_37088988_37089123_37095772
transcript_87916.known	chr20	+	2227	17	FSM	ENSG00000118705.17	ENST00000237530.11	2227	17	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_1	265.531535026915	2766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	-3	True	NA	13	True	AATAAA	-18	NA	37179329	37241619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37241302
transcript_87917.known	chr20	+	2348	17	FSM	ENSG00000118705.17	ENST00000373622.9	2348	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	1046.40430276435	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	37	False	NA	13	True	AATAAA	-18	NA	37179160	37241619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37179370_37184179_37184374_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37238401_37238450_37241302
transcript_87919.known	chr20	-	545	5	FSM	ENSG00000118702.11	ENST00000373614.7	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTCTTCAGCCT	-1	True	NA	NA	False	AATAAA	-28	NA	37261814	37251085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37251232_37254209_37254330_37256393_37256499_37256806_37256909_37261742
transcript_87921.known	chr20	+	1539	5	FSM	ENSG00000101363.13	ENST00000397152.7	1539	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	169.977204353996	2131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	14	True	NA	21	True	AATAAA	-21	NA	37289662	37317260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37289687_37297295_37297535_37298762_37298880_37301207_37301414_37316307
transcript_87926.known	chr20	+	1191	3	FSM	ENSG00000101363.13	ENST00000373606.8	1191	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	152.5	2313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	6	True	NA	21	True	AATAAA	-21	NA	37289654	37317260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37289687_37301207_37301414_37316307
transcript_87929.known	chr20	+	620	4	FSM	ENSG00000101363.13	ENST00000397150.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	69.0716214438961	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAACACACTGTGAGCATA	0	True	NA	NA	False	NA	NA	NA	37289648	37316639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37289687_37301207_37301414_37302279_37302324_37316307
transcript_87930.known	chr20	+	1503	4	FSM	ENSG00000101363.13	ENST00000397151.1	1503	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	193.852177358591	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	2849	False	NA	21	True	AATAAA	-21	NA	37297344	37317260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37297535_37298762_37298880_37301170_37301414_37316307
transcript_87933.known	chr20	+	998	3	FSM	ENSG00000053438.11	ENST00000647955.1	998	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	195	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGATCTTGCTTTTCCCT	9	True	NA	41	True	ACTAAA	-29	NA	37521240	37523474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37521404_37522357_37522385_37522666
transcript_87935.known	chr20	+	895	3	FSM	ENSG00000053438.11	ENST00000649309.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	189	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCCTCACTGCCTCCC	29	True	NA	-91	True	NA	NA	NA	37521260	37523342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37521404_37522357_37522434_37522666
transcript_8794.known	chr1	-	164	1	FSM	ENSG00000206737.1	ENST00000384010.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGTAGTTTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	143729570	143729406	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_143729400_143729600
transcript_87940.known	chr20	-	588	3	FSM	ENSG00000166619.15	ENST00000445723.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	12.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGATCCCGGCGTTGTG	-4	True	NA	NA	False	NA	NA	NA	37527878	37518939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37519351_37521318_37521410_37527792
transcript_87941.known	chr20	-	581	3	FSM	ENSG00000166619.15	ENST00000414080.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTTTCCTGTACCA	-4	True	NA	NA	False	NA	NA	NA	37527878	37518988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37519351_37521318_37521452_37527792
transcript_87942.known	chr20	+	1222	2	FSM	ENSG00000053438.11	ENST00000346199.3	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	-26	True	NA	54	True	NA	NA	NA	37521205	37523690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37521404_37522666
transcript_87944.known	chr20	-	419	1	FSM	ENSG00000276603.1	ENST00000620327.1	419	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTTAGACTGTCTTTT	836	False	NA	NA	False	AAAACA	-41	NA	37527060	37526641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37526600_37527100
transcript_87945.known	chr20	-	2018	2	FSM	ENSG00000166619.15	ENST00000373537.7	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	525	junction_1	0	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-2	True	NA	-8	True	AATAAA	-16	NA	37527876	37517416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37519351_37527792
transcript_8795.known	chr1	+	2675	2	FSM	ENSG00000232721.3	ENST00000443018.3	2743	2	68	0	68	0	multi-exon	FALSE	canonical	3	20	junction_1	0	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATGGTACCTGGTTTT	24	False	NA	NA	False	AATAAA	-16	NA	143736065	143739506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_143736124_143736889
transcript_87953.known	chr20	+	1890	16	FSM	ENSG00000132792.19	ENST00000361383.11	1890	16	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_8	51.1090337742099	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCCAGTTTTCTTT	-39	True	NA	14	True	ATTAAA	-14	NA	37694029	37872118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_87954.known	chr20	+	1958	17	FSM	ENSG00000132792.19	ENST00000628103.2	1958	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	183.72193663251	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGGGCCAGTTTTCTT	-7	True	NA	13	True	ATTAAA	-13	NA	37694061	37872117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37694153_37727301_37727403_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_87955.known	chr20	+	582	4	FSM	ENSG00000132792.19	ENST00000472237.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_1	39.8246155034798	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTTTGTAGTTAAGCT	11	False	NA	25	True	ATTAAA	-25	NA	37842253	37872129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37842420_37859898_37860037_37860271_37860345_37871924
transcript_87958.known	chr20	-	3799	8	FSM	ENSG00000101407.13	ENST00000373447.8	3799	8	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	37.4906791137232	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-10	True	NA	-14	True	AATAAA	-23	NA	38033456	37983020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38033403
transcript_8796.known	chr1	-	2395	4	FSM	ENSG00000263513.6	ENST00000584486.6	2395	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	51.227162933567	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	0	True	NA	NA	False	AATAAA	-20	NA	143971986	143955286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_143956482_143964854_143964980_143968923_143969002_143970989
transcript_87960.nnic	chr20	-	1785	7	NIC	ENSG00000101407.13	novel	3799	8	NA	NA	-324	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_6	147.759658454758	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	NA	False	NA	-14	True	AATAAA	-23	NA	38033785	37983020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38033403
transcript_87961.nnic	chr20	-	1312	6	NIC	ENSG00000101407.13	novel	3799	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_4	194.128823207683	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-15	True	NA	-14	True	AATAAA	-23	NA	38033461	37983020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38006196_38006398_38033403
transcript_87966.known	chr20	-	3958	9	FSM	ENSG00000101407.13	ENST00000373448.6	3958	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	171.512208020304	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTTTTTTATTTAA	-15	True	NA	0	True	AATAAA	-37	NA	38033461	37983006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38019004_38019145_38033403
transcript_87967.known	chr20	+	3672	7	FSM	ENSG00000101413.12	ENST00000373433.9	3672	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	7.06517279807555	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATTTTTTTTTT	-2	True	NA	14	True	AATAAA	-19	NA	38033745	38092364	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
transcript_87968.nic	chr20	+	1487	5	ISM	ENSG00000101413.12	ENST00000373433.9	3672	7	-272	32486	-251	453	5prime_fragment	FALSE	canonical	3	127	junction_3	6.29980158417708	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGATTCAGGGCTGTG	63	False	NA	NA	False	ACTAAA	-9	NA	38033473	38059878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393
transcript_87969.known	chr20	+	542	4	FSM	ENSG00000101413.12	ENST00000495457.1	542	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	61.1573562396399	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATGCCGCATCAGGGG	-1	True	NA	NA	False	NA	NA	NA	38033831	38059425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38034099_38040434_38040565_38057531_38057645_38059393
transcript_87970.known	chr20	+	2436	6	FSM	ENSG00000101413.12	ENST00000462548.6	2436	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.8416502391816	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGGCTTTGTAATCTCC	-23	True	NA	NA	False	TATAAA	-14	NA	38033724	38091237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38034099_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
transcript_87973.nnic	chr20	+	740	7	NNC	ENSG00000129988.6	novel	1825	15	NA	NA	23155	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.91485421551268	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGAATCACCTGGTA	NA	False	NA	5	True	AATAAA	-18	NA	38369636	38377013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_38369681_38370411_38370467_38370737_38370806_38371279_38371323_38373071_38373136_38373936_38374014_38376624
transcript_87974.nnic	chr20	+	735	6	NNC	ENSG00000129988.6	novel	1825	15	NA	NA	23105	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.46969384566991	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGAATCACCTGGTA	NA	False	NA	5	True	AATAAA	-18	NA	38369586	38377013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_38369681_38370737_38370806_38371279_38371323_38373071_38373136_38373936_38374014_38376624
transcript_87975.nnic	chr20	+	998	6	NNC	ENSG00000129988.6	novel	1825	15	NA	NA	23155	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.85472369909914	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGAATCACCTGGTA	NA	False	NA	5	True	AATAAA	-18	NA	38369636	38377013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_38369994_38370737_38370806_38371279_38371323_38373071_38373136_38373936_38374014_38376624
transcript_87977.known	chr20	-	1240	9	FSM	ENSG00000196756.14	ENST00000670958.1	1240	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	74.8012992868439	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	NA	False	NA	-17	True	AATAAA	-13	NA	38435409	38420593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_87978.known	chr20	-	1111	8	FSM	ENSG00000196756.14	ENST00000669137.1	1111	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	78.7462989088169	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_87979.known	chr20	-	1122	8	FSM	ENSG00000196756.14	ENST00000666419.1	1122	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	81.0180126104494	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGAATTGCTCCATGTGC	-39	True	NA	-26	True	AATAAA	-4	NA	38435383	38420602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_87980.known	chr20	-	1077	8	FSM	ENSG00000196756.14	ENST00000656320.1	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	73.5055183267882	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTCTTAAATCAGT	-8	True	NA	-13	True	AATAAA	-17	NA	38435352	38420589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_87981.known	chr20	-	1022	7	FSM	ENSG00000196756.14	ENST00000665233.2	1026	7	4	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	72.1997614646721	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_87983.known	chr20	-	968	7	FSM	ENSG00000196756.14	ENST00000669480.1	968	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	75.9160720796328	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434519_38434627_38435196
transcript_87986.known	chr20	-	1724	7	FSM	ENSG00000196756.14	ENST00000662982.2	1728	7	4	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.717222444234	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATGATGGCACCACTGC	-33	True	NA	NA	False	NA	NA	NA	38435377	38419808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422290_38422369_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_87987.known	chr20	-	923	7	FSM	ENSG00000196756.14	ENST00000417578.7	934	7	9	2	-6	0	multi-exon	FALSE	canonical	0	0	junction_3	81.9845852720023	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	25	True	NA	-15	True	AATAAA	-15	NA	38435319	38420591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_87989.known	chr20	-	1044	6	FSM	ENSG00000196756.14	ENST00000665181.1	1044	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	77.2735401026768	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-12	True	NA	-15	True	AATAAA	-15	NA	38435356	38420591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38435026
transcript_87991.known	chr20	-	868	6	FSM	ENSG00000196756.14	ENST00000654183.2	874	6	6	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	58.8747823775171	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-33	True	NA	-10	True	AATAAA	-20	NA	38435377	38420586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_87992.known	chr20	-	1979	6	FSM	ENSG00000196756.14	ENST00000658051.1	1979	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	68.3684137595718	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-2	True	NA	-11	True	AATAAA	-19	NA	38435346	38420587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_87993.known	chr20	-	893	5	FSM	ENSG00000196756.14	ENST00000655520.2	897	5	4	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	72.242646684628	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-12	True	NA	-11	True	AATAAA	-19	NA	38435356	38420587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38435026
transcript_87998.known	chr20	-	1037	6	FSM	ENSG00000196756.14	ENST00000456953.7	1043	6	4	2	0	0	multi-exon	FALSE	canonical	3	89	junction_2	39.8376706146331	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_87999.known	chr20	-	1364	9	FSM	ENSG00000196756.14	ENST00000661252.1	1364	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	75.1061748460138	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_880.known	chr1	-	2984	20	FSM	ENSG00000008128.23	ENST00000404249.8	2984	20	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_16	48.6679062314469	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-33	True	NA	NA	False	ATTAAA	-21	NA	1724357	1702378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_8800.known	chr1	-	1658	3	FSM	ENSG00000263513.6	ENST00000369175.4	1658	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	77	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAGGAAATAGAATAAATT	21	False	NA	NA	False	NA	NA	NA	143971965	143955877	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_143956482_143968923_143969002_143970989
transcript_88000.known	chr20	-	1154	7	FSM	ENSG00000196756.14	ENST00000664073.2	1166	7	10	2	0	0	multi-exon	FALSE	canonical	2	4	junction_2	70.7428834269254	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-8	True	NA	-15	True	AATAAA	-15	NA	38435352	38420591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_88001.known	chr20	-	1192	7	FSM	ENSG00000196756.14	ENST00000660885.2	1202	7	10	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	66.2688128425095	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_88002.known	chr20	-	1111	8	FSM	ENSG00000196756.14	ENST00000651115.2	1111	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	74.054861075959	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-34	True	NA	-10	True	AATAAA	-20	NA	38435378	38420586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_88003.known	chr20	-	1279	8	FSM	ENSG00000196756.14	ENST00000668054.2	1291	8	6	6	0	0	multi-exon	FALSE	canonical	3	14	junction_3	74.5478890050016	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-12	True	NA	-17	True	AATAAA	-13	NA	38435356	38420593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_88004.known	chr20	-	1230	8	FSM	ENSG00000196756.14	ENST00000664636.1	1230	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	74.3444822486264	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	10	True	NA	-17	True	AATAAA	-13	NA	38435334	38420593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_88005.known	chr20	-	1301	8	FSM	ENSG00000196756.14	ENST00000665735.1	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	73.6921339916609	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-33	True	NA	-11	True	AATAAA	-19	NA	38435377	38420587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_88006.known	chr20	-	2261	7	FSM	ENSG00000196756.14	ENST00000668042.1	2261	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	73.0996276020306	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	0	True	NA	-11	True	AATAAA	-19	NA	38435344	38420587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_88007.known	chr20	+	1299	6	FSM	ENSG00000174365.21	ENST00000666350.1	1299	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	27.1071946169278	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-10	True	NA	32	True	AATAAA	-14	NA	38446679	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_88008.known	chr20	+	1234	6	FSM	ENSG00000174365.21	ENST00000432153.6	1234	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	30.9748284902435	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTGTTCTTTCATT	-18	True	NA	33	True	AATAAA	-15	NA	38446671	38450922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_88009.known	chr20	+	1229	6	FSM	ENSG00000174365.21	ENST00000656824.1	1229	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	27.3890489064516	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTTCTTTCATTT	-2	True	NA	34	True	AATAAA	-16	NA	38446687	38450923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446949_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_88010.known	chr20	+	1172	6	FSM	ENSG00000174365.21	ENST00000666020.1	1172	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.8425027803687	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-2	True	NA	32	True	AATAAA	-14	NA	38446687	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446968_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_88012.known	chr20	+	1073	6	FSM	ENSG00000174365.21	ENST00000440918.6	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.8425027803687	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-18	True	NA	32	True	AATAAA	-14	NA	38446671	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446853_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_88016.known	chr20	+	1116	5	FSM	ENSG00000174365.21	ENST00000434729.7	1143	5	27	0	2	0	multi-exon	FALSE	canonical	2	3	junction_2	27.976552682559	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	5	True	NA	32	True	AATAAA	-14	NA	38446694	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261_38450448_38450532
transcript_88018.known	chr20	+	1046	5	FSM	ENSG00000174365.21	ENST00000421599.6	1093	5	42	5	-2	0	multi-exon	FALSE	canonical	2	3	junction_2	29.8862426544388	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	1	True	NA	32	True	AATAAA	-14	NA	38446690	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450335_38450448_38450532
transcript_88019.known	chr20	+	720	5	FSM	ENSG00000174365.21	ENST00000420006.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	27.3438749997143	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACTTTTTCTGTGCTA	20	True	NA	-32	True	NA	NA	NA	38446709	38450857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450335_38450448_38450779
transcript_8802.known	chr1	-	588	3	FSM	ENSG00000232527.8	ENST00000452399.6	588	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGACTGAATGCTGTGC	NA	False	NA	NA	False	AATAAA	-21	NA	144250326	144227028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144227380_144245685_144245821_144250224
transcript_88021.known	chr20	+	1068	5	FSM	ENSG00000174365.21	ENST00000667760.2	1076	5	7	1	2	0	multi-exon	FALSE	canonical	3	13	junction_1	27.4988636128841	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	-8	True	NA	31	True	AATAAA	-13	NA	38446681	38450920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446949_38447465_38447624_38448661_38448731_38450261_38450448_38450532
transcript_88022.known	chr20	+	967	5	FSM	ENSG00000174365.21	ENST00000359074.9	967	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.9071189210512	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	11	True	NA	31	True	AATAAA	-13	NA	38446700	38450920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446941_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_88023.known	chr20	+	954	5	FSM	ENSG00000174365.21	ENST00000449351.5	954	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.3249102153542	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	11	True	NA	32	True	AATAAA	-14	NA	38446700	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446853_38447465_38447624_38448661_38448731_38450261_38450448_38450532
transcript_88024.nic	chr20	+	909	5	NIC	ENSG00000174365.21	novel	1073	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	30.9071189210512	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-18	True	NA	32	True	AATAAA	-14	NA	38446671	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_38446853_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_88029.known	chr20	+	1169	4	FSM	ENSG00000174365.21	ENST00000437028.5	1169	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	13.8884444373331	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-7	True	NA	32	True	AATAAA	-14	NA	38446726	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261
transcript_8803.known	chr1	-	268	3	FSM	ENSG00000232527.8	ENST00000294715.6	268	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAGCCTAAATGTGGTTG	NA	False	NA	NA	False	NA	NA	NA	144250279	144245237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144245316_144245685_144245821_144250224
transcript_88030.known	chr20	+	1152	4	FSM	ENSG00000174365.21	ENST00000670898.2	1154	4	2	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	14.2672897060218	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	-16	True	NA	32	True	AATAAA	-14	NA	38446673	38450921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450335
transcript_88034.known	chr20	+	3118	3	FSM	ENSG00000174365.21	ENST00000669976.1	3118	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTTTGGTTTTT	10	True	NA	51	True	AATAAA	-33	NA	38446699	38450940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447624_38448661_38450448_38450532
transcript_88035.known	chr20	+	1581	3	FSM	ENSG00000174365.21	ENST00000669338.2	1607	3	25	1	0	0	multi-exon	FALSE	canonical	3	61	junction_1	5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	7	True	NA	31	True	AATAAA	-13	NA	38446696	38450920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447624_38448661_38448731_38450335
transcript_88037.nnic	chr20	+	2034	9	NNC	ENSG00000101442.10	novel	2547	9	NA	NA	-293	-329	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_1	50.5964425626941	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCCGTGTAGATACTT	NA	False	NA	15	True	TTTAAA	-20	NA	38748166	38772191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_38748377_38750009_38750240_38752130_38752301_38754956_38755175_38755856_38756040_38765401_38765519_38766237_38766378_38767463_38767597_38771558
transcript_88038.nic	chr20	+	1274	4	ISM	ENSG00000101442.10	ENST00000243903.6	2547	9	16691	329	16691	-329	3prime_fragment	FALSE	canonical	3	148	junction_1	11.8977121983832	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCCGTGTAGATACTT	NA	False	NA	15	True	TTTAAA	-20	NA	38765150	38772191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_38765519_38766237_38766378_38767463_38767597_38771558
transcript_88039.known	chr20	-	187	1	FSM	ENSG00000261431.1	ENST00000570096.1	187	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAACTTGTCGACTTCTG	NA	False	NA	-4	True	ATTAAA	-26	NA	38962111	38961924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38961900_38962100
transcript_8804.known	chr1	-	314	2	FSM	ENSG00000237343.1	ENST00000455105.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGGCGCTACTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	144419192	144418112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144418371_144419136
transcript_88041.known	chr20	+	3314	22	FSM	ENSG00000101452.15	ENST00000252011.8	3314	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	13.8882811658425	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	-11	True	NA	24	True	AGTAAA	-34	NA	38962343	39039721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_88049.nic	chr20	+	1341	8	ISM	ENSG00000101452.15	ENST00000652169.1	3376	23	-6	44166	0	-43101	5prime_fragment	FALSE	canonical	3	11	junction_4	30.4483503792295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTCCTGTATATAT	-11	True	NA	NA	False	NA	NA	NA	38962343	38995535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820
transcript_88050.nic	chr20	+	1315	8	ISM	ENSG00000101452.15	ENST00000252011.8	3314	22	6	44186	0	-43101	5prime_fragment	FALSE	canonical	3	89	junction_1	5.46230122694433	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTCCTGTATATAT	-5	True	NA	NA	False	NA	NA	NA	38962349	38995535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820
transcript_88053.nnic	chr20	+	414	3	NNC	ENSG00000101452.15	novel	2347	21	NA	NA	0	-67782	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	44.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCAACAAGAAGTTAAG	-11	True	NA	NA	False	CATAAA	-23	NA	38962343	38970854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_38962408_38969080_38969215_38970638
transcript_88054.nic	chr20	+	1842	2	ISM	ENSG00000101452.15	ENST00000373323.8	2347	21	0	67989	0	-67778	5prime_fragment	FALSE	canonical	3	89	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAACAAGAAGTTAAGAAAT	-11	True	NA	NA	False	CATAAA	-27	NA	38962343	38970858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_38962408_38969080
transcript_88056.nnic	chr20	-	908	2	Antisense	novelGene_ENSG00000233415.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTCATTATATGGAAAAG	NA	False	NA	NA	False	AAGAAA	-5	NA	40095883	40028135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_40028785_40095624
transcript_8806.known	chr1	-	4535	20	FSM	ENSG00000266338.7	ENST00000488031.6	4535	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	21.2703218780954	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTTCTAATCTCTT	19	False	NA	NA	False	AATAAA	-16	NA	144461647	144421389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144423257_144423869_144423976_144424689_144424863_144425516_144425569_144426277_144426451_144427046_144427099_144427817_144427991_144428605_144428658_144429699_144429864_144433772_144433825_144435110_144435317_144435780_144435854_144436894_144437110_144437944_144438048_144439828_144440039_144440140_144440296_144448774_144448917_144450771_144450803_144456536_144456806_144461380
transcript_88060.nnic	chr20	-	1299	3	Antisense	novelGene_ENSG00000223410.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	51	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTACAAGAAAAGAAAAGGAA	2773	False	NA	NA	False	CATAAA	-1	NA	40271585	40045785	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_40046814_40245051_40245183_40271445
transcript_88067.known	chr20	+	3734	21	FSM	ENSG00000198900.7	ENST00000361337.3	3734	21	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	39.328456618586	594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTCTGCCTCTTTG	-1	True	NA	6	True	AATAAA	-21	NA	41028821	41124487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461_41084569_41092471_41092588_41097219_41097342_41098214_41098338_41100055_41100244_41101208_41101354_41112781_41112926_41113969_41114156_41115370_41115440_41116277_41116393_41118168_41118297_41121695_41121791_41122005_41122156_41123194
transcript_88094.nic	chr20	-	818	4	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-170	112837	-163	0	5prime_fragment	FALSE	canonical	3	41	junction_3	10.0332779621949	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	1	True	NA	NA	False	NA	NA	NA	41618547	41514919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_41514953_41533049_41533571_41551304_41551361_41618339
transcript_88095.known	chr20	-	599	3	FSM	ENSG00000124177.16	ENST00000482596.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	27.5	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	15	True	NA	NA	False	NA	NA	NA	41618384	41514919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_41514953_41533049_41533571_41618339
transcript_88098.known	chr20	-	10719	37	FSM	ENSG00000124177.16	ENST00000373233.8	10719	37	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_17	17.426034163477	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATTTGAGGAATTC	22	True	NA	1	True	AAAAAG	-12	NA	41618377	41402082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_41405490_41412143_41412264_41413323_41413516_41415185_41415639_41416587_41416795_41417197_41417350_41420507_41422080_41423491_41423701_41425177_41425395_41426092_41426154_41437273_41437335_41439999_41440130_41445664_41445769_41447881_41447972_41450945_41451106_41451825_41452026_41452739_41452943_41454625_41454737_41455799_41455980_41457263_41457429_41473321_41473518_41483308_41483520_41484351_41484608_41487664_41487809_41488427_41488605_41489777_41490022_41491697_41491820_41493537_41493673_41493857_41493945_41497383_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
transcript_88099.known	chr20	-	1349	6	FSM	ENSG00000124177.16	ENST00000470470.1	1349	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	6.21610810716802	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTGTGTCTGTTTTCT	NA	False	NA	NA	False	AATAAA	-29	NA	41533285	41496808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049
transcript_881.known	chr1	-	2419	20	FSM	ENSG00000008128.23	ENST00000358779.9	2419	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	48.4825696182319	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	0	True	NA	NA	False	NA	NA	NA	1724324	1702880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_88101.known	chr20	+	3432	22	FSM	ENSG00000185513.17	ENST00000418998.7	3432	22	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	19.987184102436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCATAGTTGTCCTTAAGT	3	True	NA	3	True	AATAAA	-19	NA	43507696	43541895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43507745_43513475_43513640_43513837_43514062_43514634_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43528656_43528746_43529263_43529369_43530283_43530420_43530797_43530890_43532772_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752_43540816_43540933
transcript_88104.known	chr20	+	1680	7	FSM	ENSG00000124193.16	ENST00000483871.6	1680	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	100.495439365841	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTTTTTTTTTTTT	31	False	NA	NA	False	NA	NA	NA	43457927	43461334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459152_43459421_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_88107.known	chr20	+	1227	7	FSM	ENSG00000124193.16	ENST00000668808.1	1227	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	84.1455419034319	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	-4	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43460853_43463343
transcript_88109.known	chr20	+	4353	6	FSM	ENSG00000124193.16	ENST00000244020.5	4353	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	18.8785592670627	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCACCTAGTGTAGTAA	-1	True	NA	104	True	AATAAA	-18	NA	43457895	43464243	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_88112.known	chr20	+	1077	6	FSM	ENSG00000124193.16	ENST00000670741.1	1077	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	86.9275560452495	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	-4	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43463343
transcript_88113.known	chr20	+	1007	6	FSM	ENSG00000124193.16	ENST00000662078.1	1007	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	87.3233073125383	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGCATAGTCACTCA	-4	True	NA	NA	False	AGTAAA	-14	NA	43457892	43466046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43465854
transcript_88118.known	chr20	+	2579	23	FSM	ENSG00000185513.17	ENST00000439769.2	2579	23	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_8	23.285552219107	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAATAGTCAGAGTGACC	-8	True	NA	NA	False	NA	NA	NA	43507685	43540934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43507745_43513475_43513640_43513837_43514062_43514634_43514777_43515008_43515160_43515291_43515416_43516092_43516178_43518606_43518704_43528656_43528746_43529263_43529369_43530283_43530420_43530797_43530890_43532772_43532925_43533341_43533419_43534007_43534094_43534283_43534395_43534827_43534943_43535836_43535937_43536096_43536295_43536408_43536459_43540150_43540309_43540752_43540816_43540933
transcript_88126.known	chr20	-	588	1	FSM	ENSG00000282876.1	ENST00000635579.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTCCACAATTTCTG	NA	False	NA	NA	False	ATTAAA	-16	NA	43590596	43590008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_43590000_43590600
transcript_8813.known	chr1	+	2423	4	FSM	ENSG00000215784.6	ENST00000400889.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	46.8828326789242	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	-5	True	NA	NA	False	AATAAA	-20	NA	145095973	145112696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145097000_145098987_145099066_145103006_145103132_145111502
transcript_88136.known	chr20	+	1599	14	FSM	ENSG00000101052.13	ENST00000373039.4	1599	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	61.9731761023511	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	28	True	NA	37	True	ATTAAA	-32	NA	43590989	43647222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43591030_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_88149.known	chr20	+	1754	14	FSM	ENSG00000101052.13	ENST00000373030.8	1754	14	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	39.0176716146011	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTTGTAAATACTGTAC	-25	True	NA	114	True	NA	NA	NA	43590936	43647299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_88154.nnic	chr20	+	774	6	Antisense	novelGene_ENSG00000206801.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	1.85472369909914	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTCTCT	NA	False	NA	NA	False	AATAAA	-19	NA	43733128	43868815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_43733309_43812154_43812269_43813464_43813580_43820807_43820938_43856339_43856433_43868673
transcript_88165.known	chr20	-	2109	4	FSM	ENSG00000132823.11	ENST00000255174.3	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_2	20.4178571081514	1055	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTGGCTGTGGTTGAT	16	True	NA	NA	False	AATACA	-20	NA	44210771	44195938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44197740_44202960_44203075_44206880_44206999_44210695
transcript_88166.known	chr20	+	1759	4	FSM	ENSG00000223891.7	ENST00000660003.1	1759	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	2.16024689946929	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGGTGTATGATTTTG	NA	False	NA	2	True	AATAAA	-17	NA	44210942	44226012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211078_44214887_44215004_44217366_44217683_44224820
transcript_88167.known	chr20	+	1904	4	FSM	ENSG00000223891.7	ENST00000435163.5	1904	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.471404520791032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTCCATCTCAAAAAAA	10	False	NA	-38	True	NA	NA	NA	44211036	44225972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211357_44214887_44215004_44217366_44217683_44224820
transcript_88168.known	chr20	+	1559	3	FSM	ENSG00000223891.7	ENST00000660193.1	1559	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTTTAGGAATTCATAAA	-7	True	NA	NA	False	AAAACA	-41	NA	44211019	44218751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211078_44214887_44215004_44217366
transcript_88169.known	chr20	+	1441	3	FSM	ENSG00000223891.7	ENST00000439943.5	1441	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	NA	False	NA	17	True	AATAAA	-32	NA	44210959	44226027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211078_44214887_44215004_44224820
transcript_88171.known	chr20	+	1627	3	FSM	ENSG00000223891.7	ENST00000655968.1	1627	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	0	True	NA	-41	True	NA	NA	NA	44210994	44225969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211357_44214887_44215004_44224820
transcript_88173.known	chr20	+	1366	2	FSM	ENSG00000223891.7	ENST00000671199.2	1378	2	0	12	0	-3	multi-exon	FALSE	canonical	3	15	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTATGATTTTGTTT	NA	False	NA	5	True	AATAAA	-20	NA	44210906	44226015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211078_44224820
transcript_88174.known	chr20	+	1482	2	FSM	ENSG00000223891.7	ENST00000442383.1	1482	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	55	False	NA	17	True	AATAAA	-32	NA	44211081	44226027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211357_44224820
transcript_88178.known	chr20	+	2855	6	FSM	ENSG00000124194.17	ENST00000537864.5	2855	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.1637648062658	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTTGCAATAAAAAAAA	-10	True	NA	NA	False	ATTAAA	-40	NA	44247257	44280917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44247515_44257152_44257346_44258376_44258608_44263229_44263328_44264444_44264560_44278956
transcript_88179.known	chr20	+	2778	6	FSM	ENSG00000124194.17	ENST00000342560.10	2778	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	10.36532681588	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATCTTTTTTCATC	-3	True	NA	NA	False	AATAAA	-16	NA	44247307	44280947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_88180.known	chr20	+	880	5	FSM	ENSG00000124194.17	ENST00000438466.5	880	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	24.3618554301597	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGCTCCCTGGGTGGG	9	True	NA	-78	True	NA	NA	NA	44247319	44279235	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44247515_44257152_44257346_44263229_44263328_44264444_44264560_44278956
transcript_88181.known	chr20	+	826	5	FSM	ENSG00000124194.17	ENST00000445952.2	826	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	9.20258115965298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGGATAATAGTAGGACC	185	False	NA	NA	False	TATAAA	-1	NA	44247495	44264786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444
transcript_88183.known	chr20	-	4628	2	FSM	ENSG00000197296.6	ENST00000396825.4	4628	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGCATTTTGTGTGT	-22	True	NA	NA	False	ATTAAA	-25	NA	44311202	44302839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44307241_44310975
transcript_88185.known	chr20	+	1470	10	FSM	ENSG00000101076.19	ENST00000316673.8	1470	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	5.73488351136175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGGCTTGGGGGCTCCA	-8	True	NA	NA	False	NA	NA	NA	44355699	44429671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44355854_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428488_44429522
transcript_88186.known	chr20	+	6490	10	FSM	ENSG00000101076.19	ENST00000316099.10	4739	10	0	-1751	0	1751	multi-exon	FALSE	canonical	3	5	junction_1	10.4609798186132	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGGCTGCCATAAATTC	-3	True	NA	NA	False	AATAAA	-20	NA	44401238	44434596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44401488_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017_44424255_44428334_44428488_44429522
transcript_88187.known	chr20	+	1192	8	FSM	ENSG00000101076.19	ENST00000609795.5	1192	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	5.92469752952221	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTGTGCCTCAGTTTC	93	False	NA	NA	False	NA	NA	NA	44355800	44424379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44355854_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017
transcript_88188.known	chr20	+	1603	8	FSM	ENSG00000101076.19	ENST00000443598.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	11.7108008753824	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGTTTAACTGAAAAGGA	12	False	NA	3	True	AATAAA	-13	NA	44401283	44424639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44401488_44406057_44406233_44407380_44407476_44413693_44413801_44414506_44414663_44418424_44418513_44419720_44419877_44424017
transcript_88189.known	chr20	-	279	1	FSM	ENSG00000226243.1	ENST00000412502.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	820	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCCTCTACTCTTTGAG	27	False	NA	NA	False	NA	NA	NA	44466842	44466563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44466600_44466800
transcript_88190.known	chr20	+	926	5	FSM	ENSG00000124120.11	ENST00000456317.1	926	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	22.3313120975907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTGCTGCCCGAGGGCC	1	True	NA	NA	False	NA	NA	NA	44475919	44489453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44475992_44479984_44480445_44484336_44484429_44486595_44486707_44489262
transcript_88191.known	chr20	+	6224	5	FSM	ENSG00000124120.11	ENST00000262605.9	6224	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	13.7181449183189	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	-11	True	NA	14	True	AATAAA	-18	NA	44475873	44494603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44475992_44479984_44480445_44484336_44484531_44486595_44486707_44489262
transcript_88194.known	chr20	-	1726	11	FSM	ENSG00000132824.14	ENST00000255175.5	1726	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	150.072282584093	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCTGTAAGGTGGTGA	-50	True	NA	-7	True	ATTAAA	-13	NA	44522085	44496223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44496356_44500257_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_88195.known	chr20	-	4396	10	FSM	ENSG00000132824.14	ENST00000342374.5	4396	10	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_7	33.6708834909589	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACTGATATTAATTTG	-35	True	NA	-11	True	AATAAA	-41	NA	44522070	44497440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_88197.known	chr20	-	1496	12	FSM	ENSG00000196839.13	ENST00000372874.9	1496	12	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_6	23.6174749701771	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGGCATGTAATTTGG	-4	True	NA	-12	True	AATAAA	-25	NA	44651699	44619521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_88201.known	chr20	-	1128	11	FSM	ENSG00000196839.13	ENST00000537820.1	1128	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	59.2347870765144	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	4	True	NA	NA	False	NA	NA	NA	44651691	44619809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_88202.known	chr20	-	1276	11	FSM	ENSG00000196839.13	ENST00000492931.5	1276	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_5	22.7103500633522	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	4	True	NA	NA	False	NA	NA	NA	44651691	44619809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_88203.known	chr20	-	1356	11	FSM	ENSG00000196839.13	ENST00000536532.5	1356	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	59.1666291079693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTTGTACTGAAAATCT	8928	False	NA	-69	True	NA	NA	NA	44651681	44619578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_88208.known	chr20	-	812	9	FSM	ENSG00000196839.13	ENST00000539235.5	812	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	65.9231323209084	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	4	True	NA	NA	False	NA	NA	NA	44651691	44619809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44629046_44629170_44636226_44636289_44651574
transcript_8821.nnic	chr1	+	2221	3	NIC	ENSG00000215784.6	novel	2423	4	NA	NA	0	-77	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	111.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	-5	True	NA	NA	False	AATAAA	-18	NA	145095973	145112619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_145097000_145098987_145099066_145111502
transcript_88211.known	chr20	+	1443	6	FSM	ENSG00000168734.14	ENST00000372891.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	291.470341544384	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	11	False	NA	23	True	AATAAA	-19	NA	44531784	44619037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44531979_44582584_44582732_44585099_44585205_44589796_44589867_44614533_44614708_44618284
transcript_88213.known	chr20	+	1338	5	FSM	ENSG00000168734.14	ENST00000372892.7	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	260.578682934733	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	11	False	NA	23	True	AATAAA	-19	NA	44531784	44619037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44531979_44582584_44582732_44589796_44589867_44614533_44614708_44618284
transcript_88216.known	chr20	+	1191	4	FSM	ENSG00000168734.14	ENST00000372894.7	1191	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	105.849998687871	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	11	False	NA	23	True	AATAAA	-19	NA	44531784	44619037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44531979_44589796_44589867_44614533_44614708_44618284
transcript_88225.known	chr20	-	452	3	FSM	ENSG00000244558.6	ENST00000445420.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACTATAATAGTCTGGT	NA	False	NA	NA	False	NA	NA	NA	44745995	44695201	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44695508_44738819_44738935_44745964
transcript_88227.nic	chr20	-	609	2	ISM	ENSG00000244558.6	ENST00000445420.5	452	3	7002	-129	-97	3	3prime_fragment	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTTTTGGCTTTCTCA	-4	True	NA	-4	True	NA	NA	NA	44738993	44695072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_44695508_44738819
transcript_88231.known	chr20	+	3109	7	FSM	ENSG00000166913.13	ENST00000372839.7	3109	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	1085.86392896266	5396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	-21	True	NA	25	True	AATAAA	-27	NA	44885710	44908532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44885887_44887647_44887743_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_88234.known	chr20	+	3020	6	FSM	ENSG00000166913.13	ENST00000353703.9	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	2143	junction_1	217.304762948261	6866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	-27	True	NA	25	True	AATAAA	-27	NA	44885704	44908532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44885887_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_88235.known	chr20	+	1097	7	FSM	ENSG00000166913.13	ENST00000479421.5	1097	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1173.11011134221	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAATCGTACGT	-30	True	NA	36	True	GATAAA	-14	NA	44885701	44906520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44885887_44901530_44901834_44903035_44903122_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_88239.known	chr20	+	2126	15	FSM	ENSG00000101104.13	ENST00000255136.8	2126	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	25.957677484863	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	-17	True	NA	24	True	ATTAAA	-17	NA	44910059	44939316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_88246.known	chr20	+	1910	14	FSM	ENSG00000101104.13	ENST00000537323.5	1910	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	19.8007829622255	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	2	True	NA	21	True	ATTAAA	-14	NA	44910123	44939313	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_88259.known	chr20	-	1973	7	FSM	ENSG00000025772.8	ENST00000372813.4	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_3	30.8999280833395	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGTTGAACAAATTT	4	True	NA	-4	True	AATAAA	-24	NA	44960397	44942129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_88263.nnic	chr20	-	1805	6	NIC	ENSG00000025772.8	novel	1973	7	NA	NA	-67	-87	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	152.624244469874	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGCTGTGCTTTCATTT	7157	False	NA	-2	True	ATTAAA	-20	NA	44960464	44942216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_44943214_44943452_44943580_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_88267.nnic	chr20	+	1403	11	NNC	ENSG00000101109.12	novel	6366	11	NA	NA	-15	29779	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	57.8056225638994	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACCAGATCAACAGCT	7046	False	NA	NA	False	AAAAAG	-5	NA	44966463	45025036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_44966604_44972077_44972159_44975323_44975411_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972
transcript_8827.nnic	chr1	-	1203	4	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	60	4	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	8.9566858950296	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	939	False	NA	NA	False	AATAAA	-23	NA	145215998	145164094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_145164639_145170941_145171186_145214676_145214732_145215638
transcript_88271.known	chr20	+	6366	11	FSM	ENSG00000101109.12	ENST00000372806.8	6366	11	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	15.6604597633658	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTGTGTTTATTCT	-17	True	NA	58	True	AATATA	-43	NA	44966511	45080021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
transcript_88273.nic	chr20	+	1316	10	ISM	ENSG00000101109.12	ENST00000372801.5	2038	12	-58	50572	-15	29779	5prime_fragment	FALSE	canonical	3	122	junction_8	16.3940669785982	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACCAGATCAACAGCT	7046	False	NA	NA	False	AAAAAG	-5	NA	44966463	45025036	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972
transcript_88279.known	chr20	+	932	2	FSM	ENSG00000101109.12	ENST00000488618.1	932	2	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCCTACCTCTCTCTG	-14	True	NA	NA	False	AATAAA	-13	NA	44966514	44972920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44966604_44972077
transcript_88282.known	chr20	+	1622	3	FSM	ENSG00000124233.12	ENST00000372781.4	1622	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2.5	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGACTCCTGTTT	-3	True	NA	15	True	AATAAA	-20	NA	45207032	45209768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45207130_45207373_45208731_45209600
transcript_88283.nic	chr20	+	791	2	ISM	ENSG00000124232.11	ENST00000372741.7	1636	12	4939	4113	-2245	-4113	internal_fragment	FALSE	canonical	2	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAAAAATTAGCCTG	4897	False	NA	NA	False	NA	NA	NA	45311789	45312846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_45311955_45312220
transcript_88288.known	chr20	-	2613	5	FSM	ENSG00000124145.6	ENST00000372733.3	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	4.30116263352131	1610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	0	True	NA	-5	True	AATAAA	-18	NA	45348424	45325287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
transcript_88297.known	chr20	+	1313	6	FSM	ENSG00000254806.5	ENST00000419593.5	1313	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	195.944277793458	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	36	True	NA	17	True	AATAAA	-22	NA	45363199	45410610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45408459_45408607_45408800_45408939_45409931
transcript_88300.known	chr20	+	529	5	FSM	ENSG00000254806.5	ENST00000475242.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	233.55780868984	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCCTCCGACTCCTCCA	52	False	NA	NA	False	NA	NA	NA	45363215	45410007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45363316_45365618_45365687_45408459_45408607_45408800_45408939_45409931
transcript_88302.known	chr20	+	2728	4	FSM	ENSG00000204070.10	ENST00000243918.10	2728	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	18.624953392932	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCAGCAGTGTGGG	-8	True	NA	25	True	AATAAA	-22	NA	45363155	45369209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45366874
transcript_88313.known	chr20	+	1118	4	FSM	ENSG00000244274.9	ENST00000372723.7	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	190.720272184742	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	8	True	NA	17	True	AATAAA	-22	NA	45406056	45410610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406211_45408459_45408607_45408800_45408939_45409931
transcript_88314.known	chr20	+	1202	4	FSM	ENSG00000244274.9	ENST00000372722.7	1202	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	217.219295234614	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	22	False	NA	17	True	AATAAA	-22	NA	45406070	45410610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406211_45408459_45408607_45408800_45409037_45409931
transcript_88316.known	chr20	+	1036	4	FSM	ENSG00000244274.9	ENST00000357275.6	1036	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	220.659617208647	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	8	True	NA	17	True	AATAAA	-22	NA	45406183	45410610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406256_45408459_45408607_45408800_45408939_45409931
transcript_88319.known	chr20	+	1078	4	FSM	ENSG00000244274.9	ENST00000360981.8	1078	4	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	68.9266921365656	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	14	True	NA	17	True	AATAAA	-22	NA	45406618	45410610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406733_45408459_45408607_45408800_45408939_45409931
transcript_8832.nnic	chr1	-	1012	3	NNC	ENSG00000272419.6	novel	1015	3	NA	NA	-29	4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	1036	False	NA	NA	False	AATAAA	-23	NA	145215901	145164094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_145164639_145168881_145169087_145215638
transcript_88320.known	chr20	+	1207	4	FSM	ENSG00000244274.9	ENST00000372717.5	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	201.1737778362	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	-17	True	NA	17	True	AATAAA	-22	NA	45406587	45410610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406733_45408459_45408607_45408800_45409037_45409931
transcript_88323.known	chr20	+	1537	4	FSM	ENSG00000244274.9	ENST00000372712.6	1537	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	215.041081346488	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	230	False	NA	17	True	AATAAA	-22	NA	45407206	45410610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45407780_45408459_45408607_45408800_45408939_45409931
transcript_88329.known	chr20	+	2915	4	FSM	ENSG00000204070.10	ENST00000426004.5	2915	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	56.1802654160891	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCCTCAGCAAGATTAA	-25	True	NA	NA	False	AATAAA	-25	NA	45363138	45376798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45374293
transcript_8833.nnic	chr1	-	1132	3	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	76	4	combination_of_known_splicesites	TRUE	canonical	1	2	junction_1	2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	955	False	NA	NA	False	AATAAA	-23	NA	145215982	145164094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_145164639_145170941_145171186_145215638
transcript_88330.known	chr20	+	673	6	FSM	ENSG00000254806.5	ENST00000458187.5	673	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	215.441314515113	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCCTCCTCCTCCTCC	1	True	NA	NA	False	NA	NA	NA	45363501	45409997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45363694_45365618_45365687_45399689_45399752_45408459_45408607_45408800_45408939_45409931
transcript_88337.known	chr20	+	2203	12	FSM	ENSG00000124155.19	ENST00000640585.1	2203	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	198.332636524461	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGAGTTTACTGTTTG	-2	True	NA	-18	True	NA	NA	NA	45416140	45426196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418771_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_88338.known	chr20	+	2112	12	FSM	ENSG00000124155.19	ENST00000640272.1	2112	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	187.941040517349	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	-2	True	NA	-25	True	NA	NA	NA	45416140	45426189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_88339.known	chr20	+	2037	11	FSM	ENSG00000124155.19	ENST00000543458.7	2037	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	207.512023748023	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTTGTCCTTGAG	5577	False	NA	30	True	AATAAA	-20	NA	45416106	45426244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416655_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_88340.known	chr20	+	2021	11	FSM	ENSG00000124155.19	ENST00000639499.1	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	652	junction_9	27.2257231308922	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTCTCTCTTTCTTTCCT	-2	True	NA	NA	False	NA	NA	NA	45416140	45425100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495
transcript_88341.known	chr20	+	1971	11	FSM	ENSG00000124155.19	ENST00000372689.9	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	204.175145402177	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	-6	True	NA	27	True	AATAAA	-17	NA	45416136	45426241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45424215_45424382_45424495_45424580_45425573
transcript_88343.known	chr20	+	2032	11	FSM	ENSG00000124155.19	ENST00000638246.1	2032	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	205.131275041131	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	5567	False	NA	-25	True	NA	NA	NA	45416096	45426189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_88344.known	chr20	+	1944	11	FSM	ENSG00000124155.19	ENST00000638671.1	1944	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	207.080395016042	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGAGTTTACTGTTT	-2	True	NA	-19	True	NA	NA	NA	45416140	45426195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_88349.known	chr20	+	1880	10	FSM	ENSG00000124155.19	ENST00000279035.14	1880	10	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	209.270750258081	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	5554	False	NA	-12	True	NA	NA	NA	45416083	45426202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_8835.known	chr1	-	1015	3	FSM	ENSG00000272419.6	ENST00000621798.4	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	879	False	NA	NA	False	AATAAA	-19	NA	145216058	145164098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145164639_145214676_145214732_145215638
transcript_88352.known	chr20	+	1715	9	FSM	ENSG00000124155.19	ENST00000640210.1	1715	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	229.719904176804	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	1	True	NA	-12	True	NA	NA	NA	45416143	45426202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_88354.known	chr20	+	1158	7	FSM	ENSG00000124155.19	ENST00000545755.3	1158	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	255.576907320586	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCCCTTTCCAGCAGC	11	False	NA	NA	False	NA	NA	NA	45416153	45425826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_88357.known	chr20	+	2158	12	FSM	ENSG00000124155.19	ENST00000639932.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	197.051111379428	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTTACTGTTTGTGGA	-2	True	NA	-14	True	NA	NA	NA	45416140	45426200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419472_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_88358.known	chr20	+	2187	12	FSM	ENSG00000124155.19	ENST00000640986.1	2187	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_7	199.163457101518	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTTGCCTCTTGTCCT	-2	True	NA	26	True	AATAAA	-16	NA	45416140	45426240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_8837.known	chr1	-	494	3	FSM	ENSG00000272419.6	ENST00000616993.1	494	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCATCGGAAACTTGTT	1065	False	NA	NA	False	AATACA	-34	NA	145215872	145200690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145200791_145201141_145201302_145215638
transcript_8838.known	chr1	-	277	3	FSM	ENSG00000272419.6	ENST00000418192.2	277	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGAACAACCTGAAGTT	1191	False	NA	NA	False	AATAAA	-38	NA	145215746	145201187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145201302_145214676_145214732_145215638
transcript_88385.known	chr20	+	420	3	FSM	ENSG00000101443.18	ENST00000339946.7	420	3	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	377	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	2	True	NA	24	True	AATAAA	-17	NA	45469755	45481532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45469861_45479941_45480095_45481370
transcript_88387.known	chr20	+	460	3	FSM	ENSG00000101443.18	ENST00000462062.5	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	361	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	3	False	NA	24	True	AATAAA	-17	NA	45471272	45481532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45471418_45479941_45480095_45481370
transcript_88388.known	chr20	+	567	4	FSM	ENSG00000101443.18	ENST00000372676.8	567	4	0	0	0	0	multi-exon	TRUE	canonical	3	695	junction_1	63.7303346574891	31534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	-1	True	NA	24	True	AATAAA	-17	NA	45469752	45481532	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45469861_45470388_45470533_45479941_45480095_45481370
transcript_88389.known	chr20	+	692	5	FSM	ENSG00000101443.18	ENST00000447118.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	349.388304755611	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTCTGTCTCTGTCTCCC	2	True	NA	23	True	AATAAA	-16	NA	45469755	45481531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45469861_45470388_45470533_45471152_45471282_45479941_45480095_45481370
transcript_88390.known	chr20	-	1217	3	FSM	ENSG00000101448.14	ENST00000336443.3	1217	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCCTTGAGGCTGAGT	4467	False	NA	NA	False	AGTAAA	-15	NA	45546377	45541844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45542155_45542699_45542868_45545638
transcript_88391.known	chr20	+	493	2	FSM	ENSG00000180305.5	ENST00000372643.4	493	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACCTCTTTTGCTGCCA	-3	True	NA	NA	False	AATAAA	-21	NA	45629738	45631196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45629905_45630869
transcript_88392.known	chr20	-	885	1	FSM	ENSG00000235508.3	ENST00000447334.1	885	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTATACAAGAAAAATAAA	24	False	NA	NA	False	NA	NA	NA	45641370	45640485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45640500_45641400
transcript_88400.known	chr20	-	763	5	FSM	ENSG00000124116.19	ENST00000493693.5	763	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGTTTGTGCTATTTG	-3	True	NA	NA	False	GATAAA	-13	NA	45791900	45774212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45774445_45775416_45775603_45787835_45787983_45788930_45789060_45791831
transcript_88402.nnic	chr20	+	764	4	Antisense	novelGene_ENSG00000124116.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	12.2836838484589	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGCATCAGCACCAC	NA	False	NA	NA	False	TTTAAA	-10	NA	45759631	45765272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_45759900_45760029_45760232_45762148_45762328_45765157
transcript_88404.nnic	chr20	+	2890	3	Antisense	novelGene_ENSG00000124116.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	9.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGATAGCAATTTTTT	NA	False	NA	10	True	AATAAA	-15	NA	45759610	45767579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_45759900_45762148_45762328_45765157
transcript_88406.nnic	chr20	+	583	3	Antisense	novelGene_ENSG00000124116.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	9.5	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGCATCAGCACCAC	NA	False	NA	NA	False	TTTAAA	-10	NA	45759610	45765272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_45759900_45762148_45762328_45765157
transcript_88410.known	chr20	-	468	3	FSM	ENSG00000124116.19	ENST00000471401.5	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGTTTGTGCTATTTG	-2	True	NA	NA	False	GATAAA	-13	NA	45791881	45774212	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45774445_45775416_45775603_45791831
transcript_88411.known	chr20	+	1264	13	FSM	ENSG00000101457.13	ENST00000372622.8	1264	13	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	29.6857382518198	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGAACCTGCTGTGCC	-1	True	NA	13	True	ATTAAA	-19	NA	45791953	45811418	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45795344_45795444_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_88415.known	chr20	+	1073	12	FSM	ENSG00000101457.13	ENST00000456939.5	1073	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	110.873690326477	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCCCTCTACCTT	56	False	NA	22	True	ATTAAA	-28	NA	45792054	45811427	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_88429.known	chr20	+	914	6	FSM	ENSG00000175063.17	ENST00000372568.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	1138.47459348024	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	1	True	NA	33	True	AATAAA	-26	NA	45813005	45816957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45813291_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_8843.nnic	chr1	-	977	2	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	-13	4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	866	False	NA	NA	False	AATAAA	-23	NA	145216071	145164094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_145164639_145215638
transcript_88435.known	chr20	+	777	6	FSM	ENSG00000175063.17	ENST00000356455.9	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	2645	junction_1	113.26005474129	7943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	-1	True	NA	28	True	AATAAA	-21	NA	45812643	45816952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_88436.known	chr20	+	641	5	FSM	ENSG00000175063.17	ENST00000405520.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1208.04291624925	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	NA	False	NA	29	True	AATAAA	-22	NA	45812575	45816953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815853_45815914_45816708
transcript_88437.known	chr20	+	476	4	FSM	ENSG00000175063.17	ENST00000243893.10	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1323.29017561867	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	13	False	NA	33	True	AATAAA	-26	NA	45812657	45816957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45815853_45815914_45816708
transcript_88438.known	chr20	+	665	5	FSM	ENSG00000175063.17	ENST00000352551.9	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	1179.19527644916	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	1	True	NA	33	True	AATAAA	-26	NA	45812673	45816957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45815540_45815746_45815853_45815914_45816708
transcript_88439.known	chr20	+	737	6	FSM	ENSG00000175063.17	ENST00000335046.7	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	1352.1620317107	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	-10	True	NA	33	True	AATAAA	-26	NA	45812634	45816957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815389_45815541_45815853_45815914_45816708
transcript_8844.known	chr1	+	347	1	FSM	ENSG00000276216.1	ENST00000618589.1	347	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCTGTTGGTTGG	0	True	NA	NA	False	NA	NA	NA	145281115	145281462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145281100_145281500
transcript_88440.known	chr20	-	780	7	FSM	ENSG00000101470.10	ENST00000372557.1	780	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	86.0666731216109	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	NA	False	NA	3	True	AATAAA	-17	NA	45833745	45823213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45833250_45833329_45833657
transcript_88442.known	chr20	-	681	6	FSM	ENSG00000101470.10	ENST00000372555.8	681	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	83.7233539700841	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-3	True	NA	3	True	AATAAA	-17	NA	45827312	45823213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45827245
transcript_88446.known	chr20	-	1154	6	FSM	ENSG00000101473.17	ENST00000217455.9	1154	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	15.9549365401433	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGGCTTTTAATTCCC	-7	True	NA	-13	True	AATAAA	-19	NA	45857392	45841720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_88447.known	chr20	-	1197	6	FSM	ENSG00000101473.17	ENST00000461272.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	118.666928838662	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGGCTGGCTTTTAA	-4	True	NA	-18	True	AATAAA	-14	NA	45857389	45841725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45841957_45843526_45843773_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_8845.known	chr1	-	381	2	FSM	ENSG00000236140.1	ENST00000427732.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCGCTACTATTTTAT	NA	False	NA	1	True	AATAAA	-31	NA	145287755	145286609	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145286871_145287635
transcript_88450.known	chr20	-	1013	5	FSM	ENSG00000101473.17	ENST00000488679.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	127.942369838924	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGATACCACTGGAGTG	-17	True	NA	-30	True	AATAAA	-2	NA	45857402	45841737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45857187
transcript_8846.nnic	chr1	+	672	3	Genic_Genomic	ENSG00000286620.1	novel	2210	1	NA	NA	188	523	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCTCTAGTTCATTCCC	NA	False	NA	NA	False	AATAAA	-25	NA	145459985	145462530	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_145460206_145460956_145461020_145462141
transcript_88460.known	chr20	-	708	3	FSM	ENSG00000101473.17	ENST00000457981.5	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	161.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTTGTGTGCATTATCT	189	False	NA	-1	True	ATTAAA	-18	NA	45857196	45853419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45853985_45855158_45855293_45857187
transcript_88461.known	chr20	-	814	3	FSM	ENSG00000101473.17	ENST00000426915.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	165	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGTTGTGTGCATTAT	76	False	NA	-3	True	ATTAAA	-16	NA	45857309	45853421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45853980_45855158_45855293_45857187
transcript_88469.known	chr20	+	2776	2	FSM	ENSG00000132801.7	ENST00000255152.3	2776	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAAATGTGTTCTGCT	-4	True	NA	NA	False	AATAAA	-7	NA	45857613	45879122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45857981_45876713
transcript_8847.known	chr1	-	164	1	FSM	ENSG00000270722.1	ENST00000605806.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTGTAATGAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	145465780	145465616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145465600_145465800
transcript_88475.nnic	chr20	+	1067	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-22	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	12.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	-3	True	NA	29	True	AATAAA	-21	NA	45881204	45885266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_45881262_45882532_45883263_45884986
transcript_88477.nnic	chr20	+	2206	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	12.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	-3	True	NA	29	True	AATAAA	-21	NA	45881204	45885266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_45881262_45882532_45884393_45884977
transcript_88478.nnic	chr20	+	2203	3	NNC	ENSG00000168612.5	novel	2769	2	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	-3	True	NA	29	True	AATAAA	-21	NA	45881204	45885266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_45881262_45882532_45884399_45884986
transcript_88483.known	chr20	+	2769	2	FSM	ENSG00000168612.5	ENST00000372523.1	2769	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	-3	True	NA	29	True	AATAAA	-21	NA	45881226	45885266	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45881262_45882532
transcript_88486.known	chr20	+	1858	15	FSM	ENSG00000064601.21	ENST00000646241.3	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_11	37.6124165343178	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	6	True	NA	11	True	ATTAAA	-18	NA	45891334	45898820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_88489.known	chr20	+	1898	15	FSM	ENSG00000064601.21	ENST00000191018.9	1898	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	84.9571320473701	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	12	True	NA	11	True	ATTAAA	-18	NA	45891340	45898820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_8849.known	chr1	+	1644	15	FSM	ENSG00000117262.19	ENST00000534502.5	1644	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.8620436729008	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCAGGTGATACTATGAC	32	False	NA	NA	False	NA	NA	NA	145608047	145670184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145608176_145612201_145612248_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_88492.known	chr20	+	2433	14	FSM	ENSG00000064601.21	ENST00000606066.3	2433	14	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_10	38.6923841565233	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGACGGTGTGGGGG	692	False	NA	NA	False	NA	NA	NA	45890962	45898949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_88493.known	chr20	+	1820	14	FSM	ENSG00000064601.21	ENST00000354880.9	1820	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	88.0057152528162	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	-7	True	NA	11	True	ATTAAA	-18	NA	45891321	45898820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_88494.known	chr20	-	1530	14	FSM	ENSG00000100979.15	ENST00000372420.5	1530	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	123.395213433199	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGGCTGTCCTGAG	1218	False	NA	-18	True	NA	NA	NA	45910937	45898759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45910870
transcript_88498.known	chr20	-	1199	2	FSM	ENSG00000124257.7	ENST00000372518.5	1199	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGAAGGTCTCCTTGC	2	True	NA	-24	True	AATAAA	-22	NA	45891208	45888633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45888874_45890249
transcript_88499.known	chr20	-	1889	16	FSM	ENSG00000100979.15	ENST00000372431.8	1889	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_9	25.7138095194003	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTATGGGAGACCCT	0	True	NA	-13	True	AATAAA	-18	NA	45912155	45898621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_88500.known	chr20	-	1420	14	FSM	ENSG00000100979.15	ENST00000420868.2	1420	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	124.453028139205	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTCCATAATCAAT	0	True	NA	-64	True	NA	NA	NA	45912155	45898805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45911151_45911252_45911352_45911464_45912078
transcript_88501.known	chr20	-	2255	15	FSM	ENSG00000100979.15	ENST00000477313.5	2255	15	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_9	26.0921639656078	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCCTGTGGGCTGTCCT	108	False	NA	-21	True	NA	NA	NA	45912047	45898762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352
transcript_88502.known	chr20	-	1731	15	FSM	ENSG00000100979.15	ENST00000354050.8	1731	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	118.917052209187	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTATGGGAGACCCTG	3	True	NA	-12	True	AATAAA	-19	NA	45912152	45898620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_88503.known	chr20	+	1697	13	FSM	ENSG00000064601.21	ENST00000678443.1	1697	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	93.0929941271391	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTAAATTGGGTACAGC	193	False	NA	-15	True	NA	NA	NA	45891568	45898794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45898004_45898110_45898366
transcript_88504.known	chr20	+	627	2	FSM	ENSG00000100982.12	ENST00000616084.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	0	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTAAGCCTGCCTT	39	False	NA	5	True	GATAAA	-21	NA	45934732	45937972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45934805_45937417
transcript_88505.known	chr20	+	2689	17	FSM	ENSG00000100982.12	ENST00000372409.8	2689	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_4	47.6299210056032	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	-11	True	NA	22	True	AATACA	-14	NA	45934682	45948020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_88506.known	chr20	-	4454	28	FSM	ENSG00000198026.8	ENST00000322927.3	4454	28	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_26	11.3094640921719	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTACTTTGTCTGCTTG	-11	True	NA	-7	True	AATAAA	-23	NA	45972203	45948659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45949081_45949169_45949252_45949332_45949399_45949484_45949569_45949799_45949878_45949965_45950070_45950218_45950374_45950452_45950596_45952146_45952522_45952597_45952710_45953688_45953949_45957585_45957681_45957834_45957929_45959200_45959434_45960207_45960369_45960448_45960526_45960615_45960733_45960863_45960883_45962069_45962183_45963472_45963651_45963737_45963991_45965627_45965775_45967493_45967635_45967733_45968028_45968284_45968363_45969450_45969692_45971209_45971461_45972121
transcript_88507.known	chr20	+	2336	13	FSM	ENSG00000100985.7	ENST00000372330.3	2336	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	8.25126252965771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	6	True	NA	21	True	AATAAA	-21	NA	46008907	46016561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46009065_46009865_46010099_46010482_46010632_46010921_46011051_46011142_46011317_46011573_46011748_46012136_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_88508.nic	chr20	+	1524	7	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	3025	0	3025	0	3prime_fragment	FALSE	canonical	3	7	junction_3	9.08753725347706	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	6	True	NA	21	True	AATAAA	-21	NA	46011932	46016561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_88509.nic	chr20	+	790	4	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	4666	0	4666	0	3prime_fragment	FALSE	canonical	3	13	junction_1	8.05536398239638	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	252	False	NA	21	True	AATAAA	-21	NA	46013573	46016561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_46013797_46014123_46014275_46014370_46014475_46016249
transcript_8851.known	chr1	+	2124	14	FSM	ENSG00000117262.19	ENST00000313835.14	2124	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	26.8771036055757	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGGTATGTCATTTT	0	True	NA	NA	False	AATAGA	-16	NA	145607987	145670650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_88512.nic	chr20	+	1056	3	NIC	ENSG00000100985.7	novel	2336	13	NA	NA	4727	0	intron_retention	FALSE	canonical	3	29	junction_1	1	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	313	False	NA	21	True	AATAAA	-21	NA	46013634	46016561	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_46014275_46014370_46014475_46016249
transcript_88513.nnic	chr20	+	712	3	NNC	ENSG00000124140.15	novel	617	3	NA	NA	-120	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	5046	False	NA	5	True	AATAAA	-15	NA	46021569	46023581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_46021887_46022889_46023072_46023368
transcript_88514.nnic	chr20	+	654	3	NNC	ENSG00000124140.15	novel	617	3	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	5126	False	NA	5	True	AATAAA	-15	NA	46021649	46023581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_46021887_46022867_46023072_46023368
transcript_88515.known	chr20	+	411	3	FSM	ENSG00000124140.15	ENST00000413737.2	411	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTCCTCATTTGCTT	84	False	NA	13	True	AATAAA	-23	NA	46021838	46023589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46021887_46022929_46023072_46023368
transcript_88516.known	chr20	+	617	3	FSM	ENSG00000124140.15	ENST00000626701.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	-6	True	NA	5	True	AATAAA	-15	NA	46021711	46023581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46021887_46022842_46023072_46023368
transcript_88517.known	chr20	+	401	2	FSM	ENSG00000124140.15	ENST00000628272.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	9	True	NA	5	True	AATAAA	-15	NA	46021698	46023581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46021887_46023368
transcript_88518.known	chr20	-	491	2	FSM	ENSG00000204044.6	ENST00000419897.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACATCTACTGAAGGT	NA	False	NA	NA	False	NA	NA	NA	46021727	46020618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46020906_46021523
transcript_88519.known	chr20	-	3224	8	FSM	ENSG00000124160.12	ENST00000290231.11	3224	8	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	28.5442728091658	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-26	True	NA	-21	True	AATAAA	-35	NA	46089962	46060990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
transcript_8852.known	chr1	+	1955	14	FSM	ENSG00000117262.19	ENST00000460277.5	1955	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	70.5805176196351	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	2	True	NA	NA	False	ATTAAA	-16	NA	145607989	145670463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623592_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_88528.known	chr20	+	1682	9	FSM	ENSG00000101017.14	ENST00000372285.8	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_6	17.7301825991725	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACGGGGGTGAACATG	2	True	NA	NA	False	ATTAAA	-22	NA	46118313	46129858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_88529.known	chr20	+	1522	7	FSM	ENSG00000101017.14	ENST00000620709.4	1522	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	55.5537777493324	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAAGGGTTCTGGAA	17	False	NA	19	True	TATAAA	-22	NA	46118277	46129659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46127978_46128225_46128329_46128359_46128881
transcript_88530.known	chr20	+	1623	8	FSM	ENSG00000101017.14	ENST00000372276.7	1623	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	50.4065107553639	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGGGTGAACATGCTGGG	4	True	NA	NA	False	ATTAAA	-27	NA	46118315	46129863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46128137_46128225_46128329_46128359_46128881
transcript_88536.known	chr20	-	2175	11	FSM	ENSG00000080189.15	ENST00000317734.12	2175	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	73.2424057496748	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTTTTAACAACTAAGA	NA	False	NA	NA	False	ATTAAA	-22	NA	46364458	46349529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358559_46358690_46358764_46364370
transcript_88542.known	chr20	-	5740	10	FSM	ENSG00000080189.15	ENST00000543605.5	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	68.5556455969155	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGGGCTTTTTATT	5	True	NA	2	True	ATTAAA	-24	NA	46364404	46345979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355179_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_88546.known	chr20	-	5820	10	FSM	ENSG00000080189.15	ENST00000372230.10	5820	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	29.9666481275434	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCTGTAGGGCTTTT	-16	True	NA	-2	True	ATTAAA	-20	NA	46364425	46345983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_88548.known	chr20	-	2447	10	FSM	ENSG00000080189.15	ENST00000243896.6	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	77.4395821843641	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	8	True	NA	NA	False	ATTAAA	-24	NA	46364401	46349527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358959_46364370
transcript_88577.nic	chr20	-	3659	22	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_20	43.8405169872028	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-25	True	NA	-14	True	AATAAA	-19	NA	46406637	46366049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46398696_46398772_46406547
transcript_88578.known	chr20	-	3666	22	FSM	ENSG00000062598.18	ENST00000290246.11	3666	22	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_20	37.3412892397433	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-3	True	NA	-14	True	AATAAA	-19	NA	46406615	46366049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_88580.known	chr20	-	3574	21	FSM	ENSG00000062598.18	ENST00000396391.5	3574	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_20	45.596573336162	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGTGGTTCCTGTTA	-20	True	NA	-19	True	AATAAA	-14	NA	46406632	46366054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
transcript_88581.nic	chr20	-	3602	21	NIC	ENSG00000062598.18	novel	3666	22	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_20	46.7556146361055	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-14	True	NA	-14	True	AATAAA	-19	NA	46406626	46366049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46406547
transcript_88587.nnic	chr20	-	1193	3	NIC	ENSG00000215452.5	novel	2722	4	NA	NA	-76	4	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	3	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTGCGGTATTTTGT	NA	False	NA	1	True	AATAAA	-21	NA	46459352	46414223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46414965_46457596_46457915_46459218
transcript_88588.nnic	chr20	-	1111	3	NNC	ENSG00000215452.5	novel	2722	4	NA	NA	-76	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCAGCCTGCGGTATT	NA	False	NA	-3	True	AATAAA	-17	NA	46459352	46414227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_46414965_46457674_46457915_46459218
transcript_88590.nic	chr20	-	3070	2	ISM	ENSG00000283757.1	ENST00000472805.2	3876	5	22005	-54	22005	54	3prime_fragment	FALSE	canonical	2	9	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTTATATCTTAAAGT	NA	False	NA	NA	False	AATAAA	-19	NA	46459352	46454978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_46457915_46459218
transcript_88591.known	chr20	-	3876	5	FSM	ENSG00000283757.1	ENST00000472805.2	3876	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.53553390593274	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAGAAATAATATACATC	2849	False	NA	NA	False	AATAAA	-30	NA	46481357	46455032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46457915_46459218_46459623_46474500_46474689_46476231_46476326_46481049
transcript_88592.known	chr20	-	2722	4	FSM	ENSG00000215452.5	ENST00000400371.2	2722	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.68178700572909	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCAGCCTGCGGTATT	31	False	NA	-3	True	AATAAA	-17	NA	46459276	46414227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46414965_46455894_46457504_46457596_46457915_46459218
transcript_88597.known	chr20	-	2495	6	FSM	ENSG00000198185.12	ENST00000625284.2	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	34.5855461139477	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATATTCAACAGCAA	-4	True	NA	-23	True	AATAAA	-21	NA	46513555	46501087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46509604_46509752_46512081_46512141_46513496
transcript_88605.known	chr20	-	3890	5	FSM	ENSG00000198185.12	ENST00000347606.8	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	30.5736814924209	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTGCCAAATTTGT	-3	True	NA	-12	True	AGTAAA	-18	NA	46513554	46499631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46513409
transcript_88611.nnic	chr20	-	2380	4	NIC	ENSG00000198185.12	novel	4767	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	35.3553390593274	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATATTCAACAGCAA	-8	True	NA	-23	True	AATAAA	-21	NA	46513559	46501087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46503098_46504213_46504307_46504613_46504741_46513409
transcript_88626.nnic	chr20	-	1526	10	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	1256	7	NA	NA	-61	-110	multi-exon	TRUE	canonical	0	0	junction_1	3.91893157523298	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATCACGTCAACATATT	5099	False	NA	NA	False	ATTAAA	-22	NA	46684528	46585457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46585744_46588058_46588164_46589159_46589256_46592403_46592530_46596156_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_88632.nnic	chr20	-	2331	6	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	3283	12	NA	NA	-61	-6596	multi-exon	FALSE	canonical	2	4	junction_4	3.42928563989645	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGTTGTGGGTGTAT	5099	False	NA	NA	False	NA	NA	NA	46684528	46594738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_88634.nnic	chr20	-	2268	5	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	3283	12	NA	NA	-61	-6592	multi-exon	FALSE	canonical	0	0	junction_1	3.69966214673719	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTGTGGGTGTATTTCA	5099	False	NA	NA	False	NA	NA	NA	46684528	46594734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46596343_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_88636.nnic	chr20	-	980	5	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	3180	2	NA	NA	-61	455	multi-exon	FALSE	canonical	0	0	junction_1	3.69966214673719	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCCATAGATGTTTT	5099	False	NA	3	True	ATTAAA	-28	NA	46684528	46608253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46608574_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_88639.nnic	chr20	-	1009	5	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	876	4	NA	NA	-61	0	multi-exon	FALSE	canonical	2	4	junction_3	2.29128784747792	112	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	5099	False	NA	3	True	ATTAAA	-28	NA	46684528	46608708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46609058_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_88641.nnic	chr20	-	2784	4	NIC	ENSG00000158296.14	novel	4041	13	NA	NA	4407	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	14.1970262926979	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCATGTTCTGGTTCAT	-18	True	NA	-6	True	AATAAA	-14	NA	46583684	46557827	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46560199_46563413_46563552_46566228_46566391_46583571
transcript_88642.nnic	chr20	-	2183	4	NIC	ENSG00000158296.14	novel	3283	12	NA	NA	4407	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	14.1970262926979	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGACCTGGAGATGA	-18	True	NA	-14	True	AATAAA	-12	NA	46583684	46558428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46560199_46563413_46563552_46566228_46566391_46583571
transcript_8865.nic	chr1	-	2304	10	NIC	ENSG00000174827.14	novel	2065	9	NA	NA	223	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	32.902024403926	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAGTATGCTTGATAG	317	False	NA	NA	False	AATAAA	-17	NA	145707925	145670985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_145671125_145671216_145671265_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145707316
transcript_88652.nic	chr20	-	869	4	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	876	4	NA	NA	-18	0	multi-exon	FALSE	canonical	0	0	junction_3	4.08248290463863	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	-1	True	NA	3	True	ATTAAA	-28	NA	46684485	46608708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46609058_46610445_46610610_46613459_46613726_46684395
transcript_88653.nnic	chr20	-	520	4	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	3180	2	NA	NA	-61	26703	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCTCACATATTTCTT	5099	False	NA	NA	False	ATTAAA	-21	NA	46684528	46657661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46657830_46659425_46659548_46670042_46670140_46684395
transcript_88654.nnic	chr20	-	546	4	Fusion	ENSG00000158296.14_ENSG00000172315.6	novel	3180	2	NA	NA	-61	26703	multi-exon	FALSE	canonical	0	0	junction_1	2.94392028877595	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCTCACATATTTCTT	5099	False	NA	NA	False	ATTAAA	-21	NA	46684528	46657661	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46657830_46667565_46667714_46670042_46670140_46684395
transcript_88657.known	chr20	-	876	4	FSM	ENSG00000158296.14	ENST00000417157.2	876	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.62466929133727	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	NA	False	NA	3	True	ATTAAA	-28	NA	46670139	46608708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46609058_46610445_46610610_46613459_46613726_46670042
transcript_88658.known	chr20	-	700	1	FSM	ENSG00000273893.1	ENST00000610430.1	700	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTTTAAGTATTCTGT	7252	False	NA	NA	False	AATAAA	-21	NA	46682375	46681675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46681700_46682400
transcript_88659.known	chr20	-	2012	2	FSM	ENSG00000172315.6	ENST00000372102.3	2012	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTACTGTCTTGTTTC	5	True	NA	NA	False	NA	NA	NA	46689440	46685533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46687232_46689126
transcript_88660.known	chr20	+	497	2	FSM	ENSG00000197496.6	ENST00000486000.2	497	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCATTCTGATTGAGC	27	False	NA	NA	False	AATAAA	-15	NA	46709698	46710437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46709741_46709982
transcript_88661.known	chr20	-	5273	23	FSM	ENSG00000101040.20	ENST00000536340.5	5273	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	114.122931036798	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTCGTCCTCGAATTTG	4438	False	NA	-14	True	ATTAAA	-18	NA	47356414	47209213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_47210898_47212641_47212726_47220257_47220325_47221313_47221475_47224316_47224557_47227202_47227282_47229725_47229807_47236325_47236517_47238757_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47356379
transcript_8867.known	chr1	-	2065	9	FSM	ENSG00000174827.14	ENST00000417171.6	2065	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	27.1154937259125	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTATGCTTGATAGT	-4	True	NA	NA	False	AATAAA	-18	NA	145707368	145670984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145671490_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145707316
transcript_88680.known	chr20	-	341	3	FSM	ENSG00000101040.20	ENST00000446894.5	341	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	200.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAGAAACCTGGC	8975	False	NA	NA	False	NA	NA	NA	47351877	47310102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_47310205_47347855_47347927_47351709
transcript_88686.known	chr20	-	4064	14	FSM	ENSG00000101040.20	ENST00000468376.2	4064	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	111.638522756769	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGCCGGGCATGATGGC	-20	True	NA	NA	False	AAAAAG	-6	NA	47319061	47237309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_47239139_47246007_47246518_47249286_47249440_47262287_47262429_47276313_47276796_47282101_47282218_47283570_47283649_47287228_47287285_47290186_47290275_47291795_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47318950
transcript_88687.known	chr20	-	175	3	FSM	ENSG00000101040.20	ENST00000441977.1	175	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	202.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACATTCTTCCAATGGC	9851	False	NA	NA	False	AAGAAA	-12	NA	47348072	47310156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_47310205_47347855_47347927_47348016
transcript_88688.known	chr20	+	1809	2	FSM	ENSG00000231119.2	ENST00000413818.2	1809	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCTACTGGACACTCAT	11	False	NA	NA	False	ATTAAA	-30	NA	47352560	47354633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_47352741_47353004
transcript_88689.known	chr20	-	832	3	FSM	ENSG00000224565.2	ENST00000655691.1	832	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTACAGAATCTATGT	NA	False	NA	NA	False	AATAAA	-20	NA	47400797	47391924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_47392098_47397148_47397346_47400335
transcript_88691.nic	chr20	+	922	2	ISM	ENSG00000124151.19	ENST00000371997.3	6750	23	-54	71771	0	-40102	5prime_fragment	FALSE	canonical	3	49	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAGAAAAAAGGAGAAAA	-11	True	NA	NA	False	AAAAAG	-10	NA	47501886	47583971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_47502020_47583182
transcript_88693.known	chr20	-	412	2	FSM	ENSG00000196562.15	ENST00000479472.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATTAAATACTGATAACT	8743	False	NA	-24	True	AATATA	-21	NA	47657567	47656347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_47656444_47657251
transcript_88696.known	chr20	-	362	1	FSM	ENSG00000124126.14	ENST00000620554.1	362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTGGTTACATGATTA	NA	False	NA	0	True	ATTAAA	-21	NA	48692684	48692322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_48692300_48692700
transcript_88708.known	chr20	+	3550	25	FSM	ENSG00000124207.17	ENST00000262982.3	3550	25	0	0	0	0	multi-exon	FALSE	canonical	3	1698	junction_14	170.075550001561	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTTAAGGGCAGGTT	-8	True	NA	16	True	AATAAA	-22	NA	49046311	49096949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072285_49072454_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_8872.known	chr1	-	2084	9	FSM	ENSG00000174827.14	ENST00000344770.6	2084	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	37.2321685508647	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTATGCTTGATAGT	NA	False	NA	NA	False	AATAAA	-18	NA	145691802	145670984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145671490_145672729_145673021_145673656_145673882_145678448_145678646_145680911_145681108_145682499_145682637_145686476_145686727_145687811_145688024_145691731
transcript_8873.known	chr1	-	578	4	FSM	ENSG00000174827.14	ENST00000429537.6	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	55.4276304943863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAGTATGCTTGATAG	NA	False	NA	NA	False	AATAAA	-17	NA	145673756	145670985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145671125_145671216_145671265_145672729_145673021_145673656
transcript_88732.known	chr20	+	3459	24	FSM	ENSG00000124207.17	ENST00000396192.7	3459	24	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	435.063504914086	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGTTTTCAGTGCTCT	NA	False	NA	27	True	AATAAA	-33	NA	49046245	49096960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_88738.known	chr20	-	3651	14	FSM	ENSG00000124214.21	ENST00000371856.7	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_12	289.446114595511	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	5	True	NA	NA	False	AATAAA	-15	NA	49188334	49113338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49165996_49166286_49174194_49174270_49188115
transcript_88739.known	chr20	-	3334	14	FSM	ENSG00000124214.21	ENST00000340954.11	3334	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_13	287.3041396135	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_8874.nic	chr1	+	1907	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	44.7160920574337	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGTGGGATAAGTCGC	164	False	NA	16	True	AATAAA	-21	NA	145824047	145842493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_88741.known	chr20	-	3211	13	FSM	ENSG00000124214.21	ENST00000360426.8	3211	13	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_8	89.0637646109049	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-1	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_88747.known	chr20	-	1085	7	FSM	ENSG00000124214.21	ENST00000437404.2	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	374.346282055651	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACTTTTCTGAACAC	-1	True	NA	NA	False	AGTAAA	-38	NA	49188367	49124374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_8875.nic	chr1	+	2170	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-40	263	combination_of_known_junctions	FALSE	canonical	3	75	junction_3	44.7160920574337	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTATGCCTGTTCTTT	164	False	NA	26	True	NA	NA	NA	145824047	145842756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_88750.known	chr20	-	5235	15	FSM	ENSG00000124201.15	ENST00000371754.8	5235	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.737644975909	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTGTAATGTGTGCC	10	True	NA	NA	False	NA	NA	NA	49278426	49237945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49239301_49241809_49241924_49251526_49251623_49252719_49252831_49253665_49253812_49254494_49254650_49255807_49255948_49257416_49257665_49260462_49260578_49263333_49263484_49264715_49264865_49266134_49266267_49269941_49271751_49275778_49275888_49278020
transcript_88756.known	chr20	+	1075	6	FSM	ENSG00000177410.13	ENST00000450535.5	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	415.599615014259	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49281751_49281819_49289044
transcript_88761.known	chr20	+	596	5	FSM	ENSG00000177410.13	ENST00000458653.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	278.309629729192	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1469	False	NA	21	True	AATAAA	-17	NA	49278270	49289260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278398_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_88765.known	chr20	+	2608	5	FSM	ENSG00000177410.13	ENST00000371743.8	2608	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	225.169935826255	4396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAAGTCTGTGCTTCCTGC	1376	False	NA	NA	False	ACTAAA	-34	NA	49278177	49290860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_88772.known	chr20	+	568	5	FSM	ENSG00000177410.13	ENST00000428008.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	264.565091234652	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	-2	True	NA	21	True	AATAAA	-17	NA	49278639	49289260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_88776.known	chr20	+	946	4	FSM	ENSG00000177410.13	ENST00000441722.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_3	283.706812670326	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278717_49279103_49279209_49280484_49280571_49289044
transcript_88783.known	chr20	+	504	4	FSM	ENSG00000177410.13	ENST00000326677.9	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	300.428952592049	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	0	True	NA	21	True	AATAAA	-17	NA	49278641	49289260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49289044
transcript_88787.known	chr20	+	860	3	FSM	ENSG00000177410.13	ENST00000417721.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	383.5	2972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	1376	False	NA	21	True	AATAAA	-17	NA	49278177	49289260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278717_49279103_49279209_49289044
transcript_88788.known	chr20	+	2880	3	FSM	ENSG00000177410.13	ENST00000652916.1	2880	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	525	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGTGACCCTGTTAAA	0	True	NA	NA	False	NA	NA	NA	49278641	49298102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278717_49279103_49279209_49295402
transcript_88798.known	chr20	+	627	2	FSM	ENSG00000177410.13	ENST00000667889.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_1	0	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATTCTCACAGTT	0	True	NA	NA	False	AAAAAG	-15	NA	49278641	49279655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278717_49279103
transcript_88800.known	chr20	+	640	2	FSM	ENSG00000177410.13	ENST00000663883.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTGAATGTTTTATT	0	True	NA	NA	False	AAAAAG	-6	NA	49278641	49279646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278739_49279103
transcript_88803.known	chr20	+	4929	19	FSM	ENSG00000124228.15	ENST00000484427.5	4929	19	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_11	48.7038163637621	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTGTATATCTTATTA	NA	False	NA	37	True	ATTAAA	-31	NA	49219346	49244077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_88804.known	chr20	+	2570	21	FSM	ENSG00000124228.15	ENST00000618172.5	2570	21	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_12	53.041375359242	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	-7	True	NA	33	True	ATTAAA	-27	NA	49219415	49244073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_88805.known	chr20	+	527	3	FSM	ENSG00000177410.13	ENST00000659056.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_1	36	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	-8	True	NA	21	True	AATAAA	-17	NA	49280321	49289260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49280571_49280902_49280965_49289044
transcript_88806.known	chr20	+	597	2	FSM	ENSG00000177410.13	ENST00000618800.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCACAATTTCTCCAT	NA	False	NA	NA	False	AATAAA	-16	NA	49290887	49295738	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49291149_49295402
transcript_88807.known	chr20	-	5570	10	FSM	ENSG00000124212.6	ENST00000244043.5	5570	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	7.67551823963135	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGAGTGTGATTCT	-8	True	NA	-5	True	ATTAAA	-19	NA	49568137	49503873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49508065_49511027_49511180_49513079_49513262_49514226_49514396_49524057_49524240_49539569_49539722_49544304_49544449_49547840_49548020_49550065_49550190_49568042
transcript_88815.nic	chr20	+	383	3	ISM	ENSG00000197818.12	ENST00000361573.3	6147	16	42	69060	-24	7738	5prime_fragment	FALSE	canonical	3	41	junction_1	13	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTACCATTTTTTGAGTG	-1	True	NA	NA	False	AATAAA	-12	NA	49812869	49823182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_49812949_49815007_49815190_49823060
transcript_88816.nnic	chr20	-	980	3	NNC	ENSG00000158480.11	novel	4043	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-9	True	NA	NA	False	AATAAA	-19	NA	49915531	49903390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_49903781_49908154_49908593_49915379
transcript_88817.known	chr20	-	4043	3	FSM	ENSG00000158480.11	ENST00000289431.10	4043	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-7	True	NA	NA	False	AATAAA	-19	NA	49915529	49903390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49906846_49908154_49908593_49915379
transcript_88818.known	chr20	+	2438	6	FSM	ENSG00000124226.11	ENST00000622999.3	2438	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	409.726445326635	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAGTGGTAAGCTATG	-15	True	NA	11	True	AATAAA	-12	NA	49936376	49953878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49936553_49941582_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_8882.known	chr1	+	3777	15	FSM	ENSG00000186141.9	ENST00000334163.4	3777	15	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	17.607541287871	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	-7	True	NA	NA	False	AATAAA	-18	NA	145824199	145844402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_88820.known	chr20	+	624	5	FSM	ENSG00000124226.11	ENST00000623528.3	624	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	452.649077652877	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTATCTGTCTCATGT	NA	False	NA	-32	True	NA	NA	NA	49936335	49952152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49936553_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_88824.known	chr20	+	2447	6	FSM	ENSG00000124226.11	ENST00000244061.6	2447	6	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_2	74.0664566453668	2995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTATGGTTCTTG	5	True	NA	18	True	AATAAA	-19	NA	49936396	49953885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_88825.known	chr20	+	1705	3	FSM	ENSG00000124216.4	ENST00000244050.3	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	0.5	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGTCATAGAGGA	0	True	NA	NA	False	AATAAA	-24	NA	49982979	49988886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49983142_49983823_49984352_49987871
transcript_88827.known	chr20	-	2459	5	FSM	ENSG00000244687.13	ENST00000371677.7	2459	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	1712.66727285249	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484_50115622_50115698
transcript_88829.known	chr20	-	2258	5	FSM	ENSG00000244687.13	ENST00000557021.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1742.85993413125	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	2751	False	NA	-3	True	AATAAA	-25	NA	50113198	50081123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50098881_50098982_50113106
transcript_88835.known	chr20	-	2536	4	FSM	ENSG00000244687.13	ENST00000340309.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1585.38771984087	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484
transcript_88841.known	chr20	-	535	4	FSM	ENSG00000244687.13	ENST00000492371.6	535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1667.5959409348	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAAAGAAAAACCACAGG	-5	True	NA	6	True	NA	NA	NA	50115954	50082767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50115484_50115622_50115829
transcript_88848.known	chr20	-	1983	3	FSM	ENSG00000244687.13	ENST00000396059.7	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	1720	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50113172	50081123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50113106
transcript_88849.known	chr20	-	2387	3	FSM	ENSG00000244687.13	ENST00000415862.6	2387	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1767	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50115954	50081123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50115484
transcript_88857.known	chr20	-	2110	4	FSM	ENSG00000244687.13	ENST00000371674.8	2110	4	0	0	0	0	multi-exon	FALSE	canonical	3	3400	junction_3	59.218990947912	2804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-5	True	NA	-3	True	AATAAA	-25	NA	50113150	50081123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50113106
transcript_88858.known	chr20	-	1973	3	FSM	ENSG00000244687.13	ENST00000371657.9	1973	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1692.5	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	6	True	NA	-3	True	AATAAA	-25	NA	50113139	50081123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50096671_50096821_50113106
transcript_88859.known	chr20	-	733	2	FSM	ENSG00000237595.6	ENST00000435301.2	733	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGTTAGCCAGGCGTGG	95	False	NA	NA	False	ACTAAA	-4	NA	50166102	50163463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50164124_50166029
transcript_88860.known	chr20	-	494	2	FSM	ENSG00000237595.6	ENST00000670975.2	502	2	6	2	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCGTGTGTGTGTGTGTGTG	3	True	NA	NA	False	AAGAAA	-12	NA	50166194	50162766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50163096_50166029
transcript_88862.nnic	chr20	+	581	3	NNC	ENSG00000231742.6	novel	909	3	NA	NA	-140	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTTTCCCTTCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	50172375	50176672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_50172470_50172922_50173018_50176280
transcript_88863.known	chr20	+	685	3	FSM	ENSG00000231742.6	ENST00000664618.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTAATGTTTTTT	-5	True	NA	NA	False	AATAAA	-30	NA	50172566	50173592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50172789_50172926_50173018_50173220
transcript_88865.known	chr20	+	764	3	FSM	ENSG00000231742.6	ENST00000411453.3	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCTTCATTTCAGAG	NA	False	NA	NA	False	AATAAA	-21	NA	50172515	50176676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50172789_50172922_50173018_50176280
transcript_88866.nic	chr20	+	881	2	ISM	ENSG00000231742.6	ENST00000659473.1	977	3	692	0	-6	0	3prime_fragment	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTTTCCCTTCATTTC	NA	False	NA	NA	False	AATAAA	-17	NA	50172528	50176672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_50173018_50176280
transcript_88868.known	chr20	+	3979	10	FSM	ENSG00000196396.10	ENST00000371621.5	3979	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	10.9521969158681	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTTTTTGACTTTTTG	11	True	NA	NA	False	ATTAAA	-21	NA	50510382	50585241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_88873.known	chr20	+	3469	9	FSM	ENSG00000196396.10	ENST00000541713.5	3469	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.2171801940825	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGGTGCTTCCCATT	NA	False	NA	20	True	AATAAA	-21	NA	50510320	50584760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50510591_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_88877.nic	chr20	+	600	5	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-61	10685	1	-10204	5prime_fragment	FALSE	canonical	3	51	junction_4	10.3772587902586	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGATCTTTGAAGACACA	NA	False	NA	NA	False	AAAAAG	-10	NA	50510321	50574556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516
transcript_88878.nic	chr20	+	564	4	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-61	16759	1	-16278	5prime_fragment	FALSE	canonical	3	72	junction_3	1.88561808316413	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGGCTTCATTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	50510321	50568482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379
transcript_88882.known	chr20	+	315	1	FSM	ENSG00000231302.1	ENST00000426026.1	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTCCCCTGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	50620762	50621077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50620800_50621100
transcript_88885.known	chr20	+	787	6	FSM	ENSG00000124243.19	ENST00000609336.5	787	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	116.635500599089	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGAGATGGGGTCTCACT	-22	True	NA	NA	False	TTTAAA	-15	NA	50795030	50876723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50875996_50876094_50876485
transcript_88887.known	chr20	+	1114	5	FSM	ENSG00000124243.19	ENST00000371608.8	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	13.838352503098	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	8	True	NA	16	True	AATAAA	-16	NA	50795060	50877177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50876485
transcript_88893.known	chr20	+	365	4	FSM	ENSG00000124243.19	ENST00000445038.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	103.428987984779	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCACCCCCGCACCTG	17	True	NA	NA	False	NA	NA	NA	50795069	50876572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50876485
transcript_88903.nnic	chr20	+	851	2	NNC	ENSG00000124243.19	novel	1378	6	NA	NA	75861	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	NA	False	NA	16	True	AATAAA	-16	NA	50870960	50877177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_50871120_50876485
transcript_88932.known	chr20	+	993	4	FSM	ENSG00000259456.4	ENST00000664246.1	993	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.64279609239471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTCTAATAACTCAAG	10	True	NA	21	True	AATAAA	-18	NA	50931022	50945134	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50931055_50931374_50931450_50933719_50933828_50944356
transcript_88935.known	chr20	+	1023	4	FSM	ENSG00000259456.4	ENST00000655542.1	1023	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.32049379893857	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGCTTAATTCCATTT	-7	True	NA	35	True	AATAAA	-32	NA	50931005	50945148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50931055_50931371_50931450_50933723_50933828_50944356
transcript_88936.known	chr20	-	1054	9	FSM	ENSG00000000419.14	ENST00000371588.10	1054	9	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_8	14.3874945699382	2468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-1	True	NA	-19	True	AATAAA	-23	NA	50958532	50934869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_88937.known	chr20	-	1097	9	FSM	ENSG00000000419.14	ENST00000466152.5	1097	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.166551086398	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-1	True	NA	-16	True	AATAAA	-26	NA	50958550	50934866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940956_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_88938.known	chr20	-	1161	10	FSM	ENSG00000000419.14	ENST00000371582.8	1161	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	137.611727895267	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	585	False	NA	-16	True	AATAAA	-26	NA	50958555	50934866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941128_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_88939.known	chr20	-	959	7	FSM	ENSG00000000419.14	ENST00000683048.1	959	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	155.189579403888	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-1	True	NA	-19	True	AATAAA	-23	NA	50958532	50934869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50942030_50942127_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_88940.known	chr20	-	1084	10	FSM	ENSG00000000419.14	ENST00000371584.9	1084	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	140.341734595008	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTCTCAATTTTCGT	-1	True	NA	-30	True	ATTAAA	-27	NA	50958532	50934944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941104_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_88941.known	chr20	-	1065	8	FSM	ENSG00000000419.14	ENST00000683466.1	1065	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	156.414154586796	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGCATCTTTTTATGA	0	True	NA	-105	True	TATAAA	-38	NA	50959140	50935019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958740
transcript_88943.known	chr20	-	5209	4	FSM	ENSG00000101115.13	ENST00000217086.9	5209	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_3	68.2853490061293	660	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	0	True	NA	15	True	AATAAA	-23	NA	51802521	51782330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_51784685_51788860_51789142_51790021_51792353_51802278
transcript_88944.known	chr20	-	1841	9	FSM	ENSG00000020256.20	ENST00000371518.6	1841	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.9622157892236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTTATGGAATAAATA	-9	True	NA	NA	False	NA	NA	NA	52191779	52051662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52052133_52088391_52088644_52097372_52097436_52098437_52098588_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187072_52191590
transcript_88945.known	chr20	-	2545	9	FSM	ENSG00000020256.20	ENST00000361387.6	2545	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	25.3229145242012	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGATGTAAGGAACACTC	647	False	NA	-5	True	AATAAA	-19	NA	52191697	52084010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187072_52191590
transcript_88949.known	chr20	-	3040	6	FSM	ENSG00000020256.20	ENST00000371515.8	3040	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	21.0580151011438	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	2	True	NA	NA	False	AATAAA	-22	NA	52191768	52151277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187066_52191590
transcript_88950.nnic	chr20	-	1134	5	NNC	ENSG00000020256.20	novel	592	3	NA	NA	-135	90361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.4791505667086	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGGTTAGCACTCAGGT	979	False	NA	NA	False	AATAAA	-19	NA	52105058	51961301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_51961565_52088391_52088644_52097372_52097436_52098437_52098588_52104652
transcript_88952.known	chr20	-	762	5	FSM	ENSG00000020256.20	ENST00000395989.7	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.9462219947249	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCGCCAAGTTCAAAAT	1114	False	NA	NA	False	NA	NA	NA	52104923	52085240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52104652
transcript_88955.known	chr20	-	2876	5	FSM	ENSG00000020256.20	ENST00000346617.8	2876	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	30.8494327338446	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	10	True	NA	NA	False	AATAAA	-22	NA	52191760	52151277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52186831_52187072_52191590
transcript_88958.nnic	chr20	-	768	3	NNC	ENSG00000020256.20	novel	1841	9	NA	NA	-25	-24748	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	39	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACAAGGATATTCATTTA	540	False	NA	NA	False	AATAAA	-23	NA	52191804	52185008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_52185323_52186831_52187072_52191590
transcript_88959.nic	chr20	-	1702	2	ISM	ENSG00000020256.20	ENST00000216923.5	3057	6	-25	34306	-25	-25323	5prime_fragment	FALSE	canonical	3	79	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTGCAAAGTGGAAAGG	540	False	NA	NA	False	NA	NA	NA	52191804	52185583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_52187072_52191590
transcript_8897.known	chr1	+	1590	12	FSM	ENSG00000186141.9	ENST00000369294.5	1590	12	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_11	66.6814308720239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGTGGGATAAGTCGC	-31	True	NA	16	True	AATAAA	-21	NA	145824175	145842493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145842338
transcript_88974.known	chr20	+	1230	4	FSM	ENSG00000101132.10	ENST00000371419.7	1230	4	0	0	0	0	multi-exon	FALSE	canonical	3	2754	junction_1	284.27373349565	13027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGACAAACATTTTGGG	-1	True	NA	10	True	AATAAA	-26	NA	54208086	54219961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_54208125_54214350_54214459_54215299_54215441_54219018
transcript_88981.known	chr20	+	1965	8	FSM	ENSG00000101134.12	ENST00000262593.10	1965	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	8.84792146697258	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTGGATTCTGGC	-5	True	NA	21	True	AATAAA	-18	NA	54475592	54651169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_54476013_54554932_54555041_54588482_54588598_54588686_54588807_54591615_54591806_54610387_54610524_54643457_54643579_54650414
transcript_88989.known	chr20	+	742	2	FSM	ENSG00000101134.12	ENST00000491469.1	742	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCATTACATTGAATT	-7	True	NA	4	True	AATAAA	-17	NA	54475625	54495154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_54476013_54494799
transcript_88990.known	chr20	+	497	1	FSM	ENSG00000185834.10	ENST00000432629.1	497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	180	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	88	False	NA	NA	False	NA	NA	NA	55074643	55075140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_55074600_55075100
transcript_88996.known	chr20	+	2987	3	FSM	ENSG00000124098.10	ENST00000371384.4	2987	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	4.5	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTTTCTCTAATTTA	-8	True	NA	NA	False	AATAAA	-22	NA	56358973	56368663	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56359192_56365086_56365263_56366070
transcript_890.nic	chr1	-	1114	7	ISM	ENSG00000008128.23	ENST00000460465.5	2333	20	-286	6637	-253	-4910	5prime_fragment	FALSE	canonical	3	22	junction_3	31.6723679078292	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	NA	False	NA	NA	False	NA	NA	NA	1724610	1709517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_89001.known	chr20	-	2145	10	FSM	ENSG00000087586.18	ENST00000395911.5	2145	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	356.335498728826	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-11	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392153
transcript_89006.known	chr20	-	2248	9	FSM	ENSG00000087586.18	ENST00000347343.6	2248	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_8	267.24836295102	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-1	True	NA	-17	True	AATAAA	-15	NA	56392205	56369389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56391942
transcript_89007.known	chr20	-	2169	9	FSM	ENSG00000087586.18	ENST00000395913.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	260.641516263238	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	56392337	56369389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392153
transcript_89008.known	chr20	-	2033	9	FSM	ENSG00000087586.18	ENST00000395915.8	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_8	224.179057897922	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-11	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
transcript_89027.known	chr20	-	810	5	FSM	ENSG00000087586.18	ENST00000456249.5	810	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	423.808919207701	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAACTAGCTTTTGAGACT	-16	True	NA	NA	False	NA	NA	NA	56392220	56386256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56391942
transcript_89033.known	chr20	-	2223	10	FSM	ENSG00000087586.18	ENST00000312783.10	2223	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_9	310.579903637067	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	NA	False	NA	-17	True	AATAAA	-15	NA	56392295	56369389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392167
transcript_89040.nic	chr20	+	1865	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-47	-413	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	110.057076101448	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTCATTTGGTTCTT	NA	False	NA	8	True	ATTAAA	-16	NA	56392323	56404049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_89041.nic	chr20	+	2071	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-47	-207	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	110.057076101448	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	NA	False	NA	11	True	AATAAA	-15	NA	56392323	56404255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_89044.known	chr20	+	4032	6	FSM	ENSG00000101138.12	ENST00000217109.9	4032	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	31.3878957561669	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	-1	True	NA	10	True	AATAAA	-16	NA	56392644	56406362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56392714_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_89055.known	chr20	+	2234	6	FSM	ENSG00000101138.12	ENST00000493039.5	2234	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	165.533078265342	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTCTCAGGTGTTGCC	37	True	NA	NA	False	ATTAAA	-15	NA	56392682	56404462	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56392816_56395520_56395760_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_89065.known	chr20	+	1745	10	FSM	ENSG00000022277.13	ENST00000023939.8	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	241.391081693147	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTTTTATCTTTTC	NA	False	NA	33	True	AATAAA	-21	NA	56468584	56518886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56468767_56472325_56472416_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_8907.known	chr1	-	9135	9	FSM	ENSG00000265491.5	ENST00000582693.5	9135	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_7	15.0784407350362	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTCTCATTTTGTT	-11	True	NA	0	True	AATAAA	-18	NA	145824095	145738867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145746998_145747994_145748111_145750406_145750501_145751437_145751511_145752977_145753050_145771710_145771920_145784538_145784597_145788907_145788967_145823771
transcript_89071.known	chr20	+	2176	9	FSM	ENSG00000022277.13	ENST00000357348.10	2176	9	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_7	34.8870946769719	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGTCATGGACTTTT	-31	True	NA	NA	False	AATAAA	-13	NA	56468626	56519449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_89072.known	chr20	+	1572	8	FSM	ENSG00000022277.13	ENST00000395881.7	1572	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	211.382523943138	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTTATCTTTTCT	NA	False	NA	34	True	AATAAA	-22	NA	56468613	56518887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56517105_56517202_56518086
transcript_89073.known	chr20	-	4021	7	FSM	ENSG00000101144.13	ENST00000395863.8	4021	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	4.32049379893857	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCCTGTGTCTGTCT	2	True	NA	-15	True	AATAAA	-21	NA	57266641	57168752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
transcript_89079.known	chr20	+	2385	12	FSM	ENSG00000101146.13	ENST00000395841.7	2385	12	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_9	44.4343698407043	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCACTCAGTGGTTT	5	True	NA	22	True	AATAAA	-19	NA	57351254	57379202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_89080.known	chr20	+	2362	12	FSM	ENSG00000101146.13	ENST00000371242.6	2362	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	133.071285190114	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTTTAAATTCTTT	-27	True	NA	31	True	AATAAA	-28	NA	57351222	57379211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_57351359_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_89082.known	chr20	+	1156	11	FSM	ENSG00000101146.13	ENST00000492498.5	1156	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	158.909911585149	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGACTCTGGCTCA	24	True	NA	NA	False	NA	NA	NA	57351273	57378099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373662_57373739_57374606_57374802_57378012
transcript_89093.known	chr20	-	3500	11	FSM	ENSG00000124092.13	ENST00000243914.8	3500	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.113552872566	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTATATGTCAGCAT	-3	True	NA	1	True	AATAAA	-23	NA	57525140	57497165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_57498702_57503435_57503602_57508605_57508789_57512591_57512753_57514591_57514742_57515713_57515835_57518757_57518892_57519206_57519378_57523067_57523279_57523662_57524217_57525027
transcript_89094.known	chr20	-	4546	4	FSM	ENSG00000124225.16	ENST00000347215.8	4546	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	55.4496768851421	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTCACTTCTTTGGCC	-20	True	NA	4	True	AATAAA	-23	NA	57710589	57648391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57710459
transcript_89097.nic	chr20	-	1246	9	ISM	ENSG00000124224.18	ENST00000244070.7	1474	10	-13	1310	0	0	5prime_fragment	FALSE	canonical	3	34	junction_5	5.97782360060917	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTCTTACTTTTTGA	-6	True	NA	-11	True	ATTAAA	-15	NA	58309452	58247055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_89104.nnic	chr20	-	514	2	NNC	ENSG00000124224.18	novel	4680	10	NA	NA	6265	-1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTATGTCCTGTTCCAT	NA	False	NA	-6	True	AATAAA	-21	NA	58229622	58228940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_58229153_58229320
transcript_89105.nnic	chr20	-	553	2	NNC	ENSG00000124224.18	novel	4680	10	NA	NA	6267	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTATGTCCTGTTCCAT	NA	False	NA	-6	True	AATAAA	-21	NA	58229620	58228940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_58229194_58229320
transcript_89107.nnic	chr20	-	992	3	Antisense	novelGene_ENSG00000124209.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCCTGCTTTCACTG	NA	False	NA	NA	False	AATAAA	-14	NA	58376323	58362238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_58362942_58366120_58366328_58376241
transcript_89110.known	chr20	+	7829	6	FSM	ENSG00000124164.16	ENST00000475243.6	7829	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	16.0673582147159	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTTCAGTGTAAAATT	-8	True	NA	14	True	AATAAA	-25	NA	58389228	58451101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58389518_58418210_58418364_58434601_58434706_58438944_58439026_58440906_58441084_58444076
transcript_89113.known	chr20	+	1834	3	FSM	ENSG00000124164.16	ENST00000395802.7	1834	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	127.5	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	76	False	NA	27	True	AATAAA	-17	NA	58389312	58445552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58389518_58418210_58418364_58444076
transcript_89119.nic	chr20	+	2487	5	NIC	ENSG00000231290.6	novel	2092	7	NA	NA	-38	28	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	4.63680924774785	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGGGGGCTAGGA	5430	False	NA	NA	False	NA	NA	NA	58515460	58575459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_58515741_58523168_58523282_58523713_58523807_58547811_58547929_58573575
transcript_89120.nic	chr20	+	852	5	NIC	ENSG00000231290.6	novel	581	4	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_4	4.63680924774785	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGCCCCAGCACAAACAG	5430	False	NA	NA	False	AATAAA	-21	NA	58515460	58573824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_58515741_58523168_58523282_58523713_58523807_58547811_58547929_58573575
transcript_89125.nnic	chr20	+	724	4	NIC	ENSG00000231290.6	novel	2092	7	NA	NA	-31	1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	1.63299316185545	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGGGTTAATTTCCTA	5437	False	NA	8	True	AATAAA	-21	NA	58515467	58522493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_58515741_58519503_58519600_58521389_58521552_58522300
transcript_89126.nnic	chr20	+	783	4	NNC	ENSG00000231290.6	novel	2092	7	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.63299316185545	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATCTTTTGGGTTAATT	5352	False	NA	3	True	AATAAA	-16	NA	58515382	58522488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_58515741_58519503_58519600_58521389_58521552_58522321
transcript_89128.known	chr20	+	2270	4	FSM	ENSG00000231290.6	ENST00000661476.1	2270	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.43650214343336	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAGACTCCATCTCAA	36	False	NA	NA	False	NA	NA	NA	58515532	58575431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58515741_58523168_58523282_58523713_58523807_58573575
transcript_8913.known	chr1	-	2902	14	FSM	ENSG00000131788.16	ENST00000393045.7	2902	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_13	60.7170174911264	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-4	True	NA	-5	True	AATAAA	-15	NA	145859081	145848521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145858966
transcript_89132.known	chr20	+	461	3	FSM	ENSG00000231290.6	ENST00000427794.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTGGGTTAATTTCCT	71	False	NA	7	True	AATAAA	-20	NA	58515567	58522492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58515741_58519503_58519600_58522300
transcript_89135.known	chr20	+	581	4	FSM	ENSG00000231290.6	ENST00000424205.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	4.64279609239471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGCCCCAGCACAAACAG	7587	False	NA	NA	False	AATAAA	-21	NA	58523159	58573824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58523282_58523713_58523807_58547811_58547929_58573575
transcript_89136.known	chr20	+	2191	12	FSM	ENSG00000215440.12	ENST00000356091.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	79.7725071222033	537	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	-11	True	NA	22	True	ATTAAA	-22	NA	58692799	58715844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
transcript_8914.nic	chr1	-	2950	14	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	9	0	intron_retention	FALSE	canonical	3	285	junction_7	23.6167626759033	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	29	False	145859856	-5	True	AATAAA	-15	NA	145859827	145848521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145859664
transcript_89140.known	chr20	+	4937	9	FSM	ENSG00000124222.22	ENST00000371141.8	4937	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	110.883314231673	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	24	True	NA	42	True	ATTAAA	-32	NA	58651282	58679526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_89142.known	chr20	+	4897	9	FSM	ENSG00000124222.22	ENST00000355957.9	4897	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	107.905919670795	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	13	True	NA	42	True	ATTAAA	-32	NA	58651271	58679526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_89144.known	chr20	+	874	8	FSM	ENSG00000124222.22	ENST00000483434.5	874	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	131.62330294272	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCGCCCCGCCAGCTG	45	False	NA	NA	False	GGGGCT	-2	NA	58651303	58676348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58651435_58652072_58652088_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_89146.known	chr20	+	4552	8	FSM	ENSG00000124222.22	ENST00000371132.8	4552	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	73.1961301530877	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	346	False	NA	42	True	ATTAAA	-32	NA	58651604	58679526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58652088_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_89148.known	chr20	+	942	8	FSM	ENSG00000124222.22	ENST00000467096.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	129.627881858426	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGGGTGTGAGGGGCTT	51	False	NA	NA	False	NA	NA	NA	58651865	58676328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_89155.known	chr20	+	4273	10	FSM	ENSG00000124222.22	ENST00000359617.8	4273	10	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	126.056228880235	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCAATCCTAGTATTAA	24	True	NA	16	True	AATAAA	-24	NA	58651282	58679500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58651435_58652072_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_89157.known	chr20	-	594	1	FSM	ENSG00000268649.5	ENST00000596276.1	594	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTTTGCTCTTGTAT	NA	False	NA	-4	True	AATAAA	-18	NA	58817725	58817131	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_58817100_58817700
transcript_89161.known	chr20	+	1567	13	FSM	ENSG00000087460.29	ENST00000657090.1	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	3919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	34	False	NA	19	True	AATAAA	-21	NA	58839782	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58839941_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89162.known	chr20	+	1800	13	FSM	ENSG00000087460.29	ENST00000472183.6	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2047.0314414347	4130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	754	False	NA	19	True	AATAAA	-21	NA	58841484	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89165.known	chr20	+	4027	13	FSM	ENSG00000087460.29	ENST00000371100.9	4027	13	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_1	2059.00769486177	1756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-4	True	NA	19	True	AATAAA	-21	NA	58852715	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89166.known	chr20	+	1465	13	FSM	ENSG00000087460.29	ENST00000667293.2	1465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2078.91553593588	3921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-7	True	NA	19	True	AATAAA	-21	NA	58888848	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58888905_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89167.known	chr20	+	1563	13	FSM	ENSG00000087460.29	ENST00000467321.6	1563	13	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2071.0262686783	3925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	37	False	NA	19	True	AATAAA	-21	NA	58888892	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889047_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89168.known	chr20	+	1476	13	FSM	ENSG00000087460.29	ENST00000464788.6	1476	13	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	2073.87312607487	3922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-6	True	NA	19	True	AATAAA	-21	NA	58889146	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889214_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89169.known	chr20	+	1663	13	FSM	ENSG00000087460.29	ENST00000477931.5	1663	13	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	1989.94511893893	3952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	244	False	NA	19	True	AATAAA	-21	NA	58889099	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889354_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89170.known	chr20	+	1582	13	FSM	ENSG00000087460.29	ENST00000604005.6	1582	13	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	2062.93642352352	3922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	7	False	NA	19	True	AATAAA	-21	NA	58889159	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889333_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89172.known	chr20	+	1638	13	FSM	ENSG00000087460.29	ENST00000488652.6	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2061.1897639605	3967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	141	False	NA	19	True	AATAAA	-21	NA	58891980	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58892210_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89173.known	chr20	+	1583	13	FSM	ENSG00000087460.29	ENST00000603546.2	1583	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2073.65405477599	3961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	165	False	NA	19	True	AATAAA	-21	NA	58892332	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58892507_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89174.known	chr20	+	1622	12	FSM	ENSG00000087460.29	ENST00000482112.6	1622	12	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	2369.36740520048	4015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-10	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58841876_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89175.known	chr20	+	3432	12	FSM	ENSG00000087460.29	ENST00000349036.9	3432	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	2380.624076106	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	200	False	NA	19	True	AATAAA	-21	NA	58853265	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58855334_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89176.known	chr20	+	1417	12	FSM	ENSG00000087460.29	ENST00000481039.6	1417	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	2559.69931085342	3616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	3	True	NA	19	True	AATAAA	-21	NA	58888858	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58888909_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89177.known	chr20	+	1534	12	FSM	ENSG00000087460.29	ENST00000480975.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	2315.87701824522	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	-7	True	NA	6	True	AATAAA	-45	NA	58889170	58911179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889354_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89180.known	chr20	+	1537	12	FSM	ENSG00000087460.29	ENST00000476935.6	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2382.6763027395	3778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	197	False	NA	19	True	AATAAA	-21	NA	58892036	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58892210_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_8919.known	chr1	+	1473	8	FSM	ENSG00000186364.12	ENST00000334513.6	1473	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.91641053537726	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	10	True	NA	13	True	AATAAA	-22	NA	145845629	145848954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145845833_145846012_145846197_145846432_145846459_145846597_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
transcript_89190.known	chr20	-	1156	5	FSM	ENSG00000235590.8	ENST00000424094.6	1156	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	10.2591422643416	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCCTACTGTGGAT	-11	True	NA	-2	True	AATAAA	-33	NA	58850903	58818918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_58819256_58841936_58842230_58842432_58842546_58848878_58848918_58850529
transcript_89197.known	chr20	+	812	4	FSM	ENSG00000087460.29	ENST00000493744.5	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1519.23760119637	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTCGCGTCTGT	16	False	NA	26	True	AATAAA	-23	NA	58841643	58900410	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58899948
transcript_892.nic	chr1	-	1165	7	ISM	ENSG00000008128.23	ENST00000358779.9	2419	20	-367	6637	-334	-4910	5prime_fragment	FALSE	canonical	3	24	junction_3	31.0523751104485	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	NA	False	NA	NA	False	NA	NA	NA	1724691	1709517	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_89218.known	chr20	+	2503	12	FSM	ENSG00000087460.29	ENST00000419558.7	2503	12	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_2	2170.00462733254	2803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	-1	True	NA	19	True	AATAAA	-21	NA	58839747	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58840887_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89219.known	chr20	+	1407	12	FSM	ENSG00000087460.29	ENST00000488546.6	1407	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2556.83804921574	3620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	NA	False	NA	19	True	AATAAA	-21	NA	58888778	58911192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58888819_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_89220.known	chr20	-	1502	6	FSM	ENSG00000101160.15	ENST00000217131.6	1502	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.0976176963403	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTGCCCGTGCCTTA	1	True	NA	-22	True	AATAAA	-21	NA	59007254	58995184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464_59001645_59006321_59006486_59006985
transcript_89221.known	chr20	-	972	5	FSM	ENSG00000101160.15	ENST00000503833.7	972	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	1.6393596310755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAATGGTTCTGTTTAC	601	False	NA	-5	True	NA	NA	NA	59007239	58996578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_58996802_58997602_58997754_59001464_59001645_59006321_59006486_59006985
transcript_89223.known	chr20	+	2237	15	FSM	ENSG00000101158.15	ENST00000652272.2	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_13	55.1397112352073	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	-20	True	NA	14	True	AGTAAA	-14	NA	58981255	58995113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641
transcript_89224.known	chr20	+	2137	16	FSM	ENSG00000101158.15	ENST00000460601.5	2137	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_15	110.163635863504	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	-1	True	NA	34	True	AGTAAA	-34	NA	58981274	58995133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641_58994825_58994925
transcript_89229.known	chr20	-	3610	3	FSM	ENSG00000124172.10	ENST00000243997.8	3610	3	0	0	0	0	multi-exon	FALSE	canonical	3	5224	junction_2	81.5	25711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTAGTTTTGCTTGTC	-6	True	NA	NA	False	AATAAA	-16	NA	59032335	59025474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59028842_59030302_59030430_59032219
transcript_89230.known	chr20	-	1878	2	FSM	ENSG00000124172.10	ENST00000395659.1	1878	2	0	0	0	0	multi-exon	FALSE	canonical	3	5224	junction_1	0	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGTGAGACTTTT	-16	True	NA	-8	True	AATAAA	-29	NA	59032345	59028677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59030430_59032219
transcript_89235.known	chr20	-	704	6	FSM	ENSG00000101166.16	ENST00000463057.1	704	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	202.15182413226	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTGA	774	False	NA	-16	True	AATACA	-18	NA	59042732	59034908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037300_59038465_59038635_59042698
transcript_89240.known	chr20	-	943	5	FSM	ENSG00000101166.16	ENST00000371033.9	943	5	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_3	219.265107803316	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACGCCCATTGCCCTG	10	True	NA	NA	False	NA	NA	NA	59042805	59034633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59038465_59038635_59042698
transcript_89245.known	chr20	-	612	2	FSM	ENSG00000101166.16	ENST00000466051.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTGTGGTCAGTGGTG	6	True	NA	NA	False	NA	NA	NA	59042809	59038133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59038635_59042698
transcript_89247.known	chr20	+	5086	4	FSM	ENSG00000196227.11	ENST00000360816.8	5086	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	14.7271480229163	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTATTGTTTTGT	-40	True	NA	23	True	ATTAAA	-23	NA	59940388	59948680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59943939
transcript_89267.nnic	chr20	+	1325	4	NNC	ENSG00000276627.3	novel	804	3	NA	NA	-4536	-3462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGGAAATTGG	NA	False	NA	NA	False	AAAAAG	-7	NA	60750464	60759248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_60750977_60754906_60755161_60756037_60756258_60758909
transcript_89271.known	chr20	-	4699	15	FSM	ENSG00000130699.20	ENST00000252996.9	4699	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	7.62380803664362	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGCCTATTTTTCC	-13	True	NA	-1	True	ATTAAA	-17	NA	62065881	61974797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_61976336_61997549_61997670_61998135_61998193_61998982_61999109_62000123_62000255_62000551_62000722_62003159_62003275_62003730_62003879_62006509_62006759_62007546_62007637_62009051_62009175_62010045_62010166_62012814_62012935_62014546_62014708_62064450
transcript_89272.known	chr20	+	1608	1	FSM	ENSG00000283078.1	ENST00000635124.1	1608	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATAAAAAATAATAAAAACA	777	False	NA	NA	False	AATAAA	-28	NA	62066829	62068437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62066800_62068400
transcript_89276.known	chr20	-	962	7	FSM	ENSG00000101182.15	ENST00000370873.9	962	7	0	0	0	0	multi-exon	TRUE	canonical	3	4570	junction_4	619.713912489734	8966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTTTTTTTAAGAG	28	True	NA	-22	True	AATAAA	-16	NA	62143394	62136732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139780_62139906_62140817_62140945_62143207
transcript_89277.known	chr20	-	685	5	FSM	ENSG00000101182.15	ENST00000442551.5	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	2267.23944203077	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTTTTTTTTTTTAAG	6375	False	NA	-24	True	AATAAA	-14	NA	62139905	62136734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62136950_62137363_62137466_62138170_62138291_62139074_62139198_62139780
transcript_89278.known	chr20	-	1023	7	FSM	ENSG00000101182.15	ENST00000484488.5	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	2034.93125737019	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGTGTAGGCCTTTCC	-18	True	NA	-10	True	TTTAAA	-23	NA	62143440	62136802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139695_62139906_62140817_62140945_62143207
transcript_89279.known	chr20	-	925	3	FSM	ENSG00000101182.15	ENST00000370858.3	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	4960	junction_1	29.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTGAACTGCTGATAAC	-8	True	NA	NA	False	NA	NA	NA	62143430	62139330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62139906_62140817_62140945_62143207
transcript_89282.nnic	chr20	+	478	4	NNC	ENSG00000184402.15	novel	4549	11	NA	NA	-24	-814	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.87400787401181	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCCATTGACCTGTCAAA	-19	True	NA	NA	False	AGTAAA	-13	NA	62143744	62160766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_62143890_62158671_62158749_62159876_62159962_62160595
transcript_89286.known	chr20	+	4549	11	FSM	ENSG00000184402.15	ENST00000331758.8	4549	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	4.3081318457076	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGATTTTGGTGTGATGTG	5	True	NA	42	True	TATAAA	-21	NA	62143768	62182514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62143890_62158671_62158749_62159876_62159962_62161435_62161581_62162751_62162932_62163457_62163623_62164144_62164247_62165421_62165515_62172681_62172802_62174516_62174645_62179181
transcript_89289.known	chr20	+	3747	7	FSM	ENSG00000101181.18	ENST00000370823.8	3747	7	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	14.6287388383278	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	-7	True	NA	18	True	CATAAA	-19	NA	62183027	62203568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_8929.nnic	chr1	+	1190	5	NIC	ENSG00000186364.12	novel	1473	8	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.409973707244	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	-10	True	NA	13	True	AATAAA	-22	NA	145845609	145848954	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_145845833_145847249_145847349_145847582_145847720_145848111_145848265_145848376
transcript_89297.known	chr20	+	667	2	FSM	ENSG00000101181.18	ENST00000466933.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTGAAACCCTGTCTC	-6	True	NA	NA	False	NA	NA	NA	62183028	62194053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62183058_62193415
transcript_89298.known	chr20	+	590	2	FSM	ENSG00000101181.18	ENST00000488748.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	NA	False	NA	18	True	CATAAA	-19	NA	62202738	62203568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62202844_62203083
transcript_89299.known	chr20	+	2683	15	FSM	ENSG00000130703.17	ENST00000643412.1	2683	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	102.997126966073	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTACAGTGGTGTAATTA	7	True	NA	-11	True	NA	NA	NA	62238563	62294851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62238598_62242320_62242435_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_8930.nic	chr1	-	1513	5	ISM	ENSG00000198483.13	ENST00000355594.9	3359	14	12836	0	12836	0	3prime_fragment	FALSE	canonical	3	91	junction_4	7.24568837309472	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCTGAGTGTAATTTTT	5360	False	NA	-5	True	AATAAA	-14	NA	145873030	145866563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_145866766_145867286_145867393_145867990_145868057_145868310_145868401_145871981
transcript_89302.known	chr20	+	3944	14	FSM	ENSG00000130703.17	ENST00000313733.9	3944	14	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	23.0255839186089	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAAAGTGATGGCCT	13	True	NA	7	True	AATAAA	-17	NA	62238520	62296183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_89303.known	chr20	+	3936	14	FSM	ENSG00000130703.17	ENST00000358053.3	3936	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	79.5466444235912	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCGTTTGGGTGTGAG	13	True	NA	35	True	AATAAA	-45	NA	62238520	62296211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62238598_62256056_62256222_62260016_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_89307.known	chr20	+	2449	13	FSM	ENSG00000130703.17	ENST00000644775.1	2449	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.366305474095	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATTAAAGTTATTTAACCA	-4	True	NA	3	True	NA	NA	NA	62238552	62294865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62238598_62256056_62256222_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_89310.nic	chr20	+	1091	9	ISM	ENSG00000130703.17	ENST00000642516.1	3427	16	-42	12981	2	-212	5prime_fragment	FALSE	canonical	3	255	junction_6	27.4633278209324	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTCCTTGCCAAGTGTT	-1	True	NA	14	True	NA	NA	NA	62238506	62281879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789
transcript_89311.nic	chr20	+	1305	9	ISM	ENSG00000130703.17	ENST00000642516.1	3427	16	-42	12767	2	0	5prime_fragment	FALSE	canonical	3	255	junction_6	27.4633278209324	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTAGGTGGCTTGTTAC	-1	True	NA	8	True	AATAAA	-18	NA	62238506	62282093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789
transcript_89313.nic	chr20	+	866	4	ISM	ENSG00000130703.17	ENST00000642932.1	3343	14	-35	30785	2	4069	5prime_fragment	FALSE	canonical	3	275	junction_1	28.2488937836511	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAAAAATGCACTCTCA	-1	True	NA	NA	False	NA	NA	NA	62238506	62264080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615
transcript_89316.nic	chr20	+	720	3	ISM	ENSG00000130703.17	ENST00000645520.1	1780	13	-17	30122	2	4068	5prime_fragment	FALSE	canonical	0	0	junction_2	137.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAAAATGCACTCTC	-1	True	NA	NA	False	NA	NA	NA	62238506	62264079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_62238598_62256056_62256222_62263615
transcript_89321.known	chr20	+	1379	10	FSM	ENSG00000130706.13	ENST00000253003.7	1379	10	0	0	0	0	multi-exon	FALSE	canonical	3	1558	junction_6	220.954997931957	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTTCTTTGCCCAA	7	True	NA	22	True	AATAAA	-22	NA	62302996	62308862	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_89322.known	chr20	+	1361	9	FSM	ENSG00000130706.13	ENST00000620230.4	1361	9	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	657.446373763671	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTTTCTTTGCCC	80	False	NA	20	True	AATAAA	-20	NA	62302895	62308860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62303050_62303567_62303782_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_89323.known	chr20	-	668	1	FSM	ENSG00000273619.1	ENST00000610979.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGAAGTATGGTCGTTG	4	True	NA	-5	True	AGTAAA	-18	NA	62386970	62386302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62386300_62387000
transcript_89340.known	chr20	+	358	6	FSM	ENSG00000171858.18	ENST00000343986.9	358	6	0	0	0	0	multi-exon	FALSE	canonical	3	3796	junction_5	1260.63111178489	214581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	1	True	NA	14	True	AATAAA	-14	NA	62387102	62388520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308_62388365_62388456
transcript_89341.known	chr20	+	429	5	FSM	ENSG00000171858.18	ENST00000492356.2	429	5	0	0	0	0	multi-exon	FALSE	canonical	3	5119	junction_1	806.252751933288	5345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	21	False	NA	13	True	AATAAA	-13	NA	62387122	62388519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308
transcript_89342.known	chr20	+	418	4	FSM	ENSG00000171858.18	ENST00000450116.6	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	6240	junction_3	398.601165187571	1928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	216	False	NA	13	True	AATAAA	-13	NA	62387317	62388519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62387389_62387610_62387675_62387842_62387915_62388308
transcript_89343.known	chr20	+	1002	2	FSM	ENSG00000171858.18	ENST00000370562.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	7124	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	195	False	NA	14	True	AATAAA	-14	NA	62387296	62388520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62387389_62387610
transcript_89345.known	chr20	+	2716	12	FSM	ENSG00000101187.16	ENST00000217159.6	2716	12	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_11	13.1293627145135	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	1	True	NA	27	True	AATATA	-19	NA	62642502	62672293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62667911_62668011_62668185_62668476_62668542_62668929_62669079_62671749
transcript_89348.known	chr20	-	758	3	FSM	ENSG00000228705.3	ENST00000689171.1	1906	3	7	1141	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	0	True	NA	NA	False	AATAAA	-15	NA	62776949	62774120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62774570_62775314_62775480_62776805
transcript_89349.known	chr20	-	1326	3	FSM	ENSG00000228705.3	ENST00000667589.1	1326	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	NA	False	NA	NA	False	AATAAA	-15	NA	62776982	62774120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62774570_62775314_62775521_62776311
transcript_89350.known	chr20	-	846	3	FSM	ENSG00000228705.3	ENST00000658884.1	846	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	NA	False	NA	NA	False	AATAAA	-15	NA	62776996	62774120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62774570_62775314_62775521_62776805
transcript_89351.known	chr20	-	1119	3	FSM	ENSG00000228705.3	ENST00000658688.1	1119	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTTGTTAATGTGCAC	0	True	NA	NA	False	AATAAA	-13	NA	62776921	62774122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62774570_62775314_62775521_62776455
transcript_89353.known	chr20	+	2752	5	FSM	ENSG00000101189.7	ENST00000370487.5	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_3	14.0445719051881	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAACATTTTGCTGC	-6	True	NA	3	True	AATAAA	-16	NA	62796472	62801729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62796672_62797109_62797232_62798586_62798669_62798974_62799050_62799455
transcript_89359.known	chr20	-	2707	6	FSM	ENSG00000101191.17	ENST00000354665.8	2707	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	68.5145240076876	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATGCCTTCTGTCTA	30	True	NA	-18	True	TATAAA	-17	NA	62926469	62905004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926431
transcript_89360.known	chr20	-	2833	6	FSM	ENSG00000101191.17	ENST00000370371.8	2833	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	62.8700246540432	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-2	True	NA	-11	True	TATAAA	-24	NA	62937952	62904997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
transcript_89365.known	chr20	-	677	1	FSM	ENSG00000273759.1	ENST00000619319.1	677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGCTAGTGGAGTTC	9516	False	NA	-1	True	AATAAA	-19	NA	62929297	62928620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62928600_62929300
transcript_8937.known	chr1	-	3991	6	FSM	ENSG00000271601.4	ENST00000604000.4	3991	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	8.43800924389159	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACTGACTCTTTCTTG	6559	False	145958033	-3	True	ATTAAA	-21	NA	145958017	145933422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145936553_145936907_145936986_145937603_145937700_145942712_145942854_145947618_145947783_145957635
transcript_89370.known	chr20	+	4369	5	FSM	ENSG00000101193.8	ENST00000266069.5	4369	5	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	22.4874965258474	447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGGAAGCTCTCT	12	True	NA	17	True	AGTAAA	-23	NA	62938146	62948475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62938254_62941490_62941621_62942986_62943184_62943494_62943693_62944738
transcript_89373.known	chr20	+	2594	14	FSM	ENSG00000101194.18	ENST00000370349.7	2594	14	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	59.8169792443346	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	-3	True	NA	18	True	ATTAAA	-15	NA	62952706	62968597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62952890_62953210_62953273_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_89377.known	chr20	+	3518	13	FSM	ENSG00000101194.18	ENST00000370351.9	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	38.9902943763644	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTTTTGTGTATCTGT	-1	True	NA	6	True	AATAAA	-16	NA	62952708	62969585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_89384.nnic	chr20	-	1558	7	NNC	ENSG00000101198.15	novel	1353	7	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	28.9578237365234	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	980	False	NA	-5	True	AATAAA	-18	NA	63253503	63240783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253231
transcript_89385.known	chr20	-	1353	7	FSM	ENSG00000101198.15	ENST00000370316.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	15.9965274009358	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-14	True	NA	-5	True	AATAAA	-18	NA	63254463	63240783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_89392.known	chr20	-	1421	6	FSM	ENSG00000101198.15	ENST00000370313.5	1421	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	34.5485166107027	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	1046	False	NA	-5	True	AATAAA	-18	NA	63253437	63240783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
transcript_89394.nic	chr20	-	1333	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-65	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.873538606074	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	NA	False	NA	-5	True	AATAAA	-18	NA	63254528	63240783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_89399.nic	chr20	-	876	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-65	36	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	25.873538606074	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAAACCCCACATGCCCA	NA	False	NA	NA	False	AAAAAG	-24	NA	63254528	63241240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_89407.known	chr20	+	3250	13	FSM	ENSG00000101199.13	ENST00000370283.9	3250	13	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_9	53.057882438794	2011	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCTGGATGCATCCCA	-2	True	NA	31	True	AATAAA	-18	NA	63272812	63289790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_89412.known	chr20	-	1441	8	FSM	ENSG00000075043.20	ENST00000344425.8	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_5	65.1804402863188	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGTGTGGTTTATTT	-21	True	NA	81	True	TTTAAA	-20	NA	63472655	63433677	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_89417.known	chr20	-	545	3	FSM	ENSG00000075043.20	ENST00000629318.1	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTCTCCCATCTCT	NA	False	NA	-1	True	NA	NA	NA	63415035	63413275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63413582_63414087_63414194_63414902
transcript_89419.known	chr20	+	827	4	FSM	ENSG00000125534.10	ENST00000370179.8	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	1141	junction_1	65.335033991471	3284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGAGAAATGGCT	-5	True	NA	71	True	NA	NA	NA	63520764	63522206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63520895_63521283_63521364_63521511_63521590_63521667
transcript_89422.known	chr20	+	627	3	FSM	ENSG00000125534.10	ENST00000370177.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	1141	junction_1	41.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCTCTCCCCACTCCG	5	True	NA	NA	False	NA	NA	NA	63520774	63521938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63520895_63521283_63521364_63521511
transcript_89423.known	chr20	+	478	3	FSM	ENSG00000125534.10	ENST00000473620.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	632.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCGCATCCCTCGCC	7	True	NA	NA	False	NA	NA	NA	63520776	63521949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63520895_63521511_63521590_63521667
transcript_89424.known	chr20	+	1090	2	FSM	ENSG00000125531.7	ENST00000370097.2	1090	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTAAAGGCAGCA	-4	True	NA	30	True	AATAAA	-43	NA	63554158	63556695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63554207_63555653
transcript_89425.known	chr20	+	2954	1	FSM	ENSG00000125531.7	ENST00000615526.1	2954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATATGGAATTAAAGAAGC	683	False	NA	3	True	AATAAA	-16	NA	63553714	63556668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63553700_63556700
transcript_89427.known	chr20	+	801	2	FSM	ENSG00000232442.2	ENST00000449500.2	826	2	25	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGTGCTGAGGGGGGC	-9	True	NA	NA	False	AATAAA	-16	NA	63627226	63628824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63627393_63628189
transcript_89432.known	chr20	-	2248	5	FSM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.851835180516	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-2	True	NA	-8	True	AATAAA	-18	NA	63653424	63639711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
transcript_89433.nnic	chr20	-	2039	3	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	9645	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	114.5	457	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	NA	False	NA	-8	True	AATAAA	-18	NA	63642749	63639711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63641398_63642107_63642300_63642588
transcript_89436.nic	chr20	-	1078	3	ISM	ENSG00000197457.10	ENST00000370053.3	2248	5	-362	3698	-362	346	5prime_fragment	FALSE	canonical	3	169	junction_2	22	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGGAGTCTGAGGCAGGG	2	True	NA	NA	False	AATACA	-43	NA	63653786	63643409	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_63643932_63644213_63644310_63653326
transcript_8944.known	chr1	-	1620	4	FSM	ENSG00000131779.11	ENST00000369306.8	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	4.32049379893857	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCTGGTCCCTCAT	-10	True	NA	-2	True	ATTAAA	-19	NA	145918717	145911349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918632
transcript_89445.known	chr20	-	1623	8	FSM	ENSG00000101246.20	ENST00000618838.4	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_7	72.4943347540245	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	155	False	NA	-2	True	NA	NA	NA	63707838	63699455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707809
transcript_89446.nic	chr20	-	1727	8	NIC	ENSG00000101246.20	novel	1623	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	139	junction_7	47.5750749353276	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-6	True	NA	-2	True	NA	NA	NA	63707999	63699455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_89447.known	chr20	-	2456	8	FSM	ENSG00000101246.20	ENST00000619493.4	2456	8	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_7	88.5744239124849	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTTCTATTTAAAAAAA	140	False	NA	NA	False	TATAAA	-21	NA	63707853	63698642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707809
transcript_89448.known	chr20	-	2518	8	FSM	ENSG00000101246.20	ENST00000622789.5	2518	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	73.7889986822603	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTTCTTCTATTTAAA	17	True	NA	NA	False	TATAAA	-17	NA	63707976	63698646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_8945.known	chr1	-	796	6	FSM	ENSG00000265241.8	ENST00000369307.4	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	972.490699184316	10324	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGAACTCTATGTAT	8835	False	NA	70	True	NA	NA	NA	145927460	145925641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
transcript_89452.nic	chr20	-	1686	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	139	junction_7	47.5750749353276	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-6	True	NA	-27	True	AATAAA	-28	NA	63707999	63699496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_89458.nic	chr20	-	902	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	-3	-227	combination_of_known_junctions	FALSE	canonical	3	139	junction_7	47.5750749353276	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTAGGCATCCGGAGGCTT	-6	True	NA	-8	True	NA	NA	NA	63707999	63700280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_8946.known	chr1	+	1178	8	FSM	ENSG00000121851.13	ENST00000369314.2	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	14.0581881144486	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGTGGGTGAGGCC	-1	True	NA	20	True	AATAAA	-16	NA	145964689	145978848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145964769_145974824_145974992_145975306_145975437_145977083_145977153_145977482_145977540_145977777_145977852_145977982_145978097_145978360
transcript_89466.known	chr20	+	1867	7	FSM	ENSG00000197114.12	ENST00000355969.11	1867	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	46.8460836736173	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	-14	True	NA	14	True	ATTAAA	-21	NA	63708038	63736142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_8947.known	chr1	-	2905	8	FSM	ENSG00000265972.6	ENST00000582401.6	2905	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_5	3.97953950776689	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGAGATGGCTTTGG	-3	True	NA	NA	False	AATAAA	-23	NA	145996579	145992434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145993887_145994015_145994168_145994280_145994438_145994543_145994801_145994928_145995032_145995143_145995292_145995403_145995477_145996016
transcript_89471.known	chr20	+	1896	7	FSM	ENSG00000197114.12	ENST00000357119.8	1896	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	81.8284112572698	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	0	True	NA	14	True	ATTAAA	-21	NA	63708052	63736142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_89472.known	chr20	+	1945	7	FSM	ENSG00000197114.12	ENST00000328969.5	1945	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	82.4055014344714	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	37	False	NA	13	True	ATTAAA	-20	NA	63708089	63736141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_89473.known	chr20	+	1890	7	FSM	ENSG00000197114.12	ENST00000369967.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	53.5456710564812	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	33	False	NA	14	True	ATTAAA	-21	NA	63708085	63736142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_89475.known	chr20	-	1061	7	FSM	ENSG00000101246.20	ENST00000607873.1	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	94.430603560969	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGAGGCCCGTCAGCC	NA	False	NA	NA	False	NA	NA	NA	63708025	63700053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63707866
transcript_89477.known	chr20	-	1612	7	FSM	ENSG00000101246.20	ENST00000618568.4	1612	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	97.9892284329706	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-3	True	NA	-27	True	AATAAA	-28	NA	63707996	63699496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_89480.known	chr20	-	1698	7	FSM	ENSG00000101246.20	ENST00000612157.4	1698	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	79.6145226841323	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	-17	True	NA	-8	True	NA	NA	NA	63707916	63699477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_89487.known	chr20	+	2831	6	FSM	ENSG00000197114.12	ENST00000477340.5	2831	6	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_1	48.8114740609214	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	-14	True	NA	13	True	ATTAAA	-20	NA	63708038	63736141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63734825_63735158_63735565_63735780
transcript_89496.known	chr20	+	1328	5	FSM	ENSG00000125520.14	ENST00000493772.5	1328	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	117.72080317429	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	145	False	NA	21	True	ATTAAA	-21	NA	63741251	63743505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63741480_63742129_63742231_63742335_63742616_63742698_63742791_63742878
transcript_89505.known	chr20	+	2410	4	FSM	ENSG00000203896.10	ENST00000621325.1	2410	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	21.483844059096	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCGCAGCCTGCTC	1577	False	NA	11	True	AATAAA	-23	NA	63736317	63739103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63737648_63737820_63737903_63738007_63738500_63738597
transcript_89506.known	chr20	-	306	1	FSM	ENSG00000274501.1	ENST00000613401.1	306	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAAGTGCTTCTATTA	9652	False	NA	NA	False	ATTAAA	-27	NA	63730377	63730071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63730100_63730400
transcript_89507.known	chr20	+	2237	6	FSM	ENSG00000101150.18	ENST00000348257.9	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	128.799689440619	1952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	12	True	NA	37	True	AATAAA	-26	NA	63865289	63891545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63889189_63889239_63889849
transcript_89508.known	chr20	+	2310	7	FSM	ENSG00000101150.18	ENST00000346249.9	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_4	155.676659208188	1945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	-8	True	NA	30	True	AATAAA	-19	NA	63865269	63891538	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889849
transcript_89509.known	chr20	+	2339	8	FSM	ENSG00000101150.18	ENST00000352482.8	2339	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	273.927221080672	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	12	True	NA	37	True	AATAAA	-26	NA	63865289	63891545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_8951.nic	chr1	-	902	4	ISM	ENSG00000265972.6	ENST00000582401.6	2905	8	-87	2566	-87	-1162	5prime_fragment	FALSE	canonical	3	32	junction_1	2.86744175568088	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTGCATGTTCATTCCT	1496	False	NA	NA	False	AAAAAG	-10	NA	145996666	145995000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_145995032_145995143_145995292_145995403_145995477_145996016
transcript_89510.known	chr20	+	2275	7	FSM	ENSG00000101150.18	ENST00000358548.4	2275	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	294.350697864526	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	16	True	NA	37	True	AATAAA	-26	NA	63865293	63891545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_89511.known	chr20	+	2310	6	FSM	ENSG00000101150.18	ENST00000615907.4	2310	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	247.616962262281	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	NA	False	NA	37	True	AATAAA	-26	NA	63865227	63891545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889849
transcript_89512.known	chr20	+	2197	5	FSM	ENSG00000101150.18	ENST00000611972.4	2197	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	296.838339841739	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	NA	False	NA	37	True	AATAAA	-26	NA	63865227	63891545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63889189_63889239_63889849
transcript_89514.known	chr20	+	5287	6	FSM	ENSG00000101152.11	ENST00000470551.1	5287	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	29.178073959739	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTCTTACTCGCTAGT	31	True	NA	36	True	AATAAA	-41	NA	63895181	63936031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931108_63931183_63931464
transcript_89518.known	chr20	-	1838	15	FSM	ENSG00000198276.16	ENST00000354216.11	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_8	192.812177297716	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-13	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_8952.nic	chr1	-	1481	2	ISM	ENSG00000168509.20	ENST00000336751.11	2126	4	2311	0	2310	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTTGCCTATGTTGA	2310	False	NA	-2	True	ATTAAA	-21	NA	146019424	146017469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_146018701_146019174
transcript_89530.nnic	chr20	-	1275	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-177	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	189.380730869035	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	9703	False	NA	NA	False	AATAAA	-21	NA	63941786	63939828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63941382
transcript_89533.nnic	chr20	-	1249	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-177	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_7	231.030875222604	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	9703	False	NA	NA	False	AATAAA	-21	NA	63941786	63939828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135_63941209_63941382
transcript_89536.nnic	chr20	-	1046	7	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	200	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_6	181.714748988628	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	0	True	NA	NA	False	AATAAA	-21	NA	63941409	63939828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135
transcript_89539.known	chr20	-	823	5	FSM	ENSG00000130590.14	ENST00000498830.5	823	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.4333243340507	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGGCGCCTCTGGTTG	-5	True	NA	NA	False	NA	NA	NA	63980008	63975359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63975533_63975691_63975833_63976970_63977143_63977224_63977407_63979853
transcript_8954.known	chr1	+	2063	4	FSM	ENSG00000233396.9	ENST00000611275.6	2067	4	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_3	4.78423336480244	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAATGTCCTTTTCT	-19	True	NA	NA	False	ATTAAA	-16	NA	146052593	146061948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_146052949_146058312_146058462_146058557_146059663_146061494
transcript_89542.known	chr20	+	3047	21	FSM	ENSG00000101161.8	ENST00000266079.5	3047	21	0	0	0	0	multi-exon	TRUE	canonical	3	543	junction_11	100.615344257226	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCTGCTGGTTTTC	-9	True	NA	23	True	ATTAAA	-24	NA	63981131	64033100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840
transcript_89549.nic	chr20	+	533	3	ISM	ENSG00000101161.8	ENST00000266079.5	3047	21	-68	48083	-68	-48083	5prime_fragment	FALSE	canonical	3	588	junction_1	62	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGACGGTAAAAGAAATT	NA	False	NA	NA	False	GATAAA	-22	NA	63981063	63985017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_63981317_63983046_63983216_63984906
transcript_8955.nnic	chr1	+	2374	4	NNC	ENSG00000233396.9	novel	3990	4	NA	NA	-3	-617	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	4.78423336480244	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTCAGATTGTTCA	-7	True	NA	NA	False	TATAAA	-18	NA	146052605	146061088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_146052949_146058312_146058462_146058557_146059974_146060622
transcript_89557.known	chr20	+	1182	10	FSM	ENSG00000171703.17	ENST00000343484.10	1182	10	0	0	0	0	multi-exon	FALSE	canonical	2	277	junction_6	77.7109236486158	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	27	True	NA	26	True	ATTAAA	-16	NA	64063197	64072347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_89565.known	chr20	+	421	2	FSM	ENSG00000171703.17	ENST00000476113.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTTAGCCCGCAGC	25	True	NA	23	True	AATAAA	-17	NA	64063195	64064123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_64063385_64063891
transcript_89566.known	chr20	-	1619	6	FSM	ENSG00000171700.14	ENST00000395042.2	1619	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	29.654004788561	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-16	True	NA	-6	True	TTTAAA	-6	NA	64079518	64073180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079293
transcript_89568.known	chr20	-	1510	6	FSM	ENSG00000171700.14	ENST00000332298.9	1510	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	35.4423475520457	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	4960	False	NA	-6	True	TTTAAA	-6	NA	64079988	64073180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
transcript_89569.nic	chr20	-	1555	5	NIC	ENSG00000171700.14	novel	1619	6	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	45.996603135449	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	5396	False	NA	-6	True	TTTAAA	-6	NA	64079552	64073180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079293
transcript_8957.nic	chr1	+	894	2	ISM	ENSG00000233396.9	ENST00000664959.1	4486	3	-14	3702	1	-605	5prime_fragment	FALSE	canonical	1	3	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGTATGTGTATATATG	-18	True	NA	NA	False	AATAAA	-16	NA	146052594	146058233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_146052949_146057693
transcript_89570.nnic	chr20	-	1362	5	NIC	ENSG00000171700.14	novel	1510	6	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_4	46.4219775537406	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	0	True	NA	-6	True	TTTAAA	-6	NA	64079938	64073180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079872
transcript_89571.known	chr20	+	3402	5	FSM	ENSG00000125510.18	ENST00000336866.7	3402	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.69258240356725	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGTAACCAGTGTTTC	-13	True	NA	13	True	AATAAA	-22	NA	64080081	64100633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_64080353_64091965_64092117_64092687_64092954_64097801_64098158_64098275
transcript_89573.known	chr20	+	3859	6	FSM	ENSG00000203880.12	ENST00000308824.11	3859	6	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_4	47.4442831118777	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGAGAAGTGGCTGGC	-9	True	NA	17	True	AATAAA	-18	NA	64255747	64276226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267886_64268011_64273220
transcript_89575.known	chr21	-	3188	21	FSM	ENSG00000275464.5	ENST00000617716.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_20	53.2971622133862	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	4	True	NA	37	True	ATTAAA	-16	NA	5154658	5130870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_89577.nnic	chr21	-	1001	8	NNC	ENSG00000280071.4	novel	1584	7	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_1	285.564460716823	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGCTGCATTCATC	NA	False	NA	NA	False	AATAAA	-15	NA	5128442	5116342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_5116482_5117135_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_89583.known	chr21	-	1584	7	FSM	ENSG00000280071.4	ENST00000620528.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	1	226	junction_1	202.962845532542	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	-7	True	NA	NA	False	AATAAA	-17	NA	5128369	5116340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_8959.known	chr1	-	1874	5	FSM	ENSG00000264343.7	ENST00000362074.7	1874	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.5190060335083	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGGTAATTTATTCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	146229026	146155351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189382_146228708
transcript_89593.known	chr21	-	898	6	FSM	ENSG00000280071.4	ENST00000624120.3	898	6	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_2	327.24828494585	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGATGTTTCTTCCTGGG	NA	False	NA	NA	False	NA	NA	NA	5128372	5116936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5117232_5118690_5118848_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_89599.known	chr21	-	696	6	FSM	ENSG00000280071.4	ENST00000624648.3	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	302.222699346029	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	89	False	NA	NA	False	ATTAAA	-21	NA	5128273	5120633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_896.known	chr1	-	2078	7	FSM	ENSG00000215790.8	ENST00000647043.1	2078	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_1	66.6418703885845	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTCCCTGCTTTGTTT	151	False	NA	NA	False	AATAAA	-22	NA	1745919	1724837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1725423_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
transcript_89604.known	chr21	-	807	5	FSM	ENSG00000280071.4	ENST00000624714.3	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	84.5857553019419	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	NA	False	NA	NA	False	NA	NA	NA	5128378	5121448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_8961.known	chr1	+	164	1	FSM	ENSG00000273768.1	ENST00000615842.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTAGTTTAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	146376806	146376970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_146376800_146377000
transcript_89610.known	chr21	-	936	3	FSM	ENSG00000279094.3	ENST00000624261.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	18	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	3	True	NA	NA	False	ATTAAA	-17	NA	5502542	5499150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5499810_5499998_5500102_5502368
transcript_89611.known	chr21	-	977	3	FSM	ENSG00000279094.3	ENST00000624859.3	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	16.5	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTGCTTTTCATGA	48	False	NA	NA	False	ATTAAA	-13	NA	5502497	5499154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5499968_5500066_5500102_5502368
transcript_89614.known	chr21	-	674	2	FSM	ENSG00000279094.3	ENST00000623227.1	674	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATATTTATTAAAATTT	48	False	NA	NA	False	AATAAA	-15	NA	5502497	5499556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5500102_5502368
transcript_89617.known	chr21	+	560	4	FSM	ENSG00000274333.4	ENST00000623449.3	560	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	26.1661358757205	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCCTGTTAAAGGATGCAC	NA	False	NA	NA	False	NA	NA	NA	5553658	5590178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_5553839_5585822_5585988_5586444_5586500_5590018
transcript_8962.known	chr1	+	668	2	FSM	ENSG00000287978.1	ENST00000660431.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTTTGTTCTCCT	NA	False	NA	17	True	AATAAA	-18	NA	146387201	146388092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_146387323_146387545
transcript_89620.known	chr21	+	1604	4	FSM	ENSG00000274333.4	ENST00000624627.3	1604	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	77.9914525231238	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAAGTCTTTGGATTTTT	NA	False	NA	NA	False	TATAAA	-21	NA	5553668	5591228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_5553839_5566124_5566184_5585822_5585988_5590018
transcript_89627.known	chr21	+	549	3	FSM	ENSG00000274333.4	ENST00000619252.4	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	70.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCGGGCTCCCTAACA	NA	False	NA	NA	False	NA	NA	NA	5553636	5590200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_5553839_5585822_5585988_5590018
transcript_89633.nnic	chr21	+	889	3	NNC	ENSG00000274333.4	novel	560	4	NA	NA	0	-29313	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5553658	5557056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_5553839_5556239_5556290_5556397
transcript_89639.known	chr21	+	835	2	FSM	ENSG00000274333.4	ENST00000623436.3	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATAGAGCCGGGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	5553668	5590683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_5553839_5590018
transcript_89646.nnic	chr21	+	997	2	NNC	ENSG00000274333.4	novel	560	4	NA	NA	0	-29313	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5553658	5557056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_5553839_5556239
transcript_89653.known	chr21	-	2380	4	FSM	ENSG00000275496.4	ENST00000621924.4	2380	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	81.4138945280363	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	6267304	6228965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6230952_6234982_6235148_6254790_6254850_6267134
transcript_89658.known	chr21	-	572	3	FSM	ENSG00000275496.4	ENST00000623405.3	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAAACCTGGACCTT	3	True	NA	NA	False	NA	NA	NA	6267278	6230695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6230952_6235988_6236161_6267134
transcript_89662.known	chr21	-	465	2	FSM	ENSG00000275496.4	ENST00000624446.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCATCTCAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	6267313	6230665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6230952_6267134
transcript_89667.known	chr21	-	859	3	FSM	ENSG00000275496.4	ENST00000617746.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	71	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	6	False	NA	NA	False	NA	NA	NA	6267275	6230398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6230952_6234982_6235148_6267134
transcript_89672.nnic	chr21	+	781	4	FSM	ENSG00000278903.4	ENST00000692046.1	725	4	-54	-2	0	0	multi-exon	FALSE	canonical	3	22	junction_3	17.326921891156	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	-34	True	NA	NA	False	AATAAA	-19	NA	6318421	6329955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6318605_6320882_6320975_6322599_6322698_6329547
transcript_89676.nnic	chr21	+	807	4	FSM	ENSG00000278903.4	ENST00000692898.1	792	4	-15	0	5	0	multi-exon	FALSE	canonical	3	22	junction_3	21.4527905462721	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	6318406	6329955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6318605_6320871_6320975_6322599_6322698_6329547
transcript_89677.known	chr21	+	665	4	FSM	ENSG00000278903.4	ENST00000623738.3	665	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	25.2234458831902	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAAATGATTTCTCCAA	-16	True	NA	NA	False	NA	NA	NA	6318439	6356986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6318605_6320871_6320975_6322599_6322698_6356687
transcript_89683.known	chr21	+	767	3	FSM	ENSG00000278903.4	ENST00000688828.1	1395	3	97	531	0	-105	multi-exon	FALSE	canonical	2	5	junction_2	33.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTATTTATTAAATT	39	False	NA	NA	False	AATAAA	-16	NA	6318494	6321717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6318605_6320871_6320975_6321163
transcript_89695.nic	chr21	-	2310	18	NIC	ENSG00000274276.5	novel	2353	18	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	803	junction_1	476.252709807111	6011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6467542	6444868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_89696.known	chr21	-	2353	18	FSM	ENSG00000274276.5	ENST00000618024.4	2353	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_17	712.200668623347	5768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6468040	6444868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467902
transcript_89698.known	chr21	-	1992	18	FSM	ENSG00000274276.5	ENST00000624934.3	1992	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	778.426204852704	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGAGCATCCGTCTCC	NA	False	NA	NA	False	NA	NA	NA	6467532	6445432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6445662_6447735_6447778_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_89709.known	chr21	-	2453	17	FSM	ENSG00000274276.5	ENST00000624406.3	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_16	618.140811223462	7333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	1	True	NA	NA	False	TATAAA	-14	NA	6467509	6444868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6464982_6467447
transcript_8971.known	chr1	-	5343	8	FSM	ENSG00000131791.8	ENST00000254101.4	5343	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_7	46.7926385279583	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTTATTGATTGAT	12	True	NA	-14	True	AATAAA	-19	NA	147172470	147155105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
transcript_89710.known	chr21	-	2514	17	FSM	ENSG00000274276.5	ENST00000398168.6	2495	17	-19	0	0	0	multi-exon	FALSE	canonical	3	1666	junction_10	306.224794881146	7785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	NA	False	NA	NA	False	TATAAA	-14	NA	6467532	6444868	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_89711.known	chr21	-	2563	17	NIC	ENSG00000274276.5	novel	2353	18	NA	NA	0	-4	intron_retention	FALSE	canonical	3	44	junction_16	645.087999689771	6538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTGTGGCCTCGTGTCT	NA	False	NA	NA	False	TATAAA	-10	NA	6468040	6444872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467902
transcript_89753.known	chr21	-	945	8	FSM	ENSG00000275895.7	ENST00000610664.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	4049	junction_6	885.778177419063	40700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-4	True	NA	NA	False	AATAAA	-20	NA	6499248	6484622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
transcript_89754.known	chr21	-	813	8	FSM	ENSG00000275895.7	ENST00000619610.2	813	8	0	0	0	0	multi-exon	FALSE	canonical	3	2268	junction_5	1688.83558484924	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGGGAATTTTTTTT	42	False	NA	NA	False	NA	NA	NA	6499202	6484708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
transcript_8976.known	chr1	+	2981	22	FSM	ENSG00000237188.5	ENST00000650785.1	2981	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	200.819409854102	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATAATAATAAATTTTCT	561	False	NA	-1	True	NA	NA	NA	147173361	147295734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147173560_147174423_147174586_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_89766.nnic	chr21	-	781	4	NIC	ENSG00000280145.3	novel	785	4	NA	NA	-9	8133	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	15.195028426722	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	6670704	6659170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6659579_6666428_6666527_6668151_6668244_6670521
transcript_89767.nnic	chr21	-	800	4	NIC	ENSG00000280145.3	novel	785	4	NA	NA	-17	8133	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	16.9377946878833	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	6670712	6659170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6659579_6666428_6666527_6668151_6668255_6670521
transcript_8977.known	chr1	+	2506	14	FSM	ENSG00000237188.5	ENST00000651151.1	2506	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	219.095477822722	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTGGATTACCAAGACC	9	True	NA	NA	False	NA	NA	NA	147172754	147286393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147173560_147174423_147174586_147259836_147259919_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297
transcript_89771.known	chr21	-	897	3	FSM	ENSG00000278878.1	ENST00000623225.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	27.5	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	-1	True	NA	NA	False	ATTAAA	-17	NA	6670667	6667303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6667963_6668151_6668244_6670521
transcript_89772.known	chr21	-	936	3	FSM	ENSG00000280145.3	ENST00000623324.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29.5	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	3	True	NA	NA	False	ATTAAA	-17	NA	6670695	6667303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6667963_6668151_6668255_6670521
transcript_89780.nnic	chr21	+	892	3	NNC	ENSG00000280164.1	novel	1032	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	6721808	6725209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_6721992_6724392_6724443_6724550
transcript_89782.nnic	chr21	+	563	2	NIC	ENSG00000280164.1	novel	1032	3	NA	NA	-3	-437	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAGCTATTAATAAAATG	NA	False	NA	NA	False	AATAAA	-21	NA	6721808	6724772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_6721992_6724392
transcript_89783.nnic	chr21	+	1000	2	NIC	ENSG00000280164.1	novel	1032	3	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	6721808	6725209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_6721992_6724392
transcript_89784.nnic	chr21	+	1357	2	NIC	ENSG00000280164.1	novel	1032	3	NA	NA	-3	357	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAACGGTTATTTTCC	NA	False	NA	NA	False	AATAAA	-1	NA	6721808	6725566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_6721992_6724392
transcript_89785.known	chr21	+	1032	3	FSM	ENSG00000280164.1	ENST00000623892.1	1032	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	6721811	6725209	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6721992_6724258_6724294_6724392
transcript_89790.known	chr21	-	710	5	FSM	ENSG00000280018.4	ENST00000623165.3	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	19.3520024803636	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTTGATGTTACGTCCC	69	False	NA	NA	False	NA	NA	NA	6997699	6986449	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6986649_6992109_6992323_6993498_6993597_6995221_6995314_6997591
transcript_89792.nnic	chr21	-	779	4	NIC	ENSG00000280018.4	novel	710	5	NA	NA	-9	207	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	16.779617264871	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTGCCTCATGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	6997774	6986242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6986649_6993498_6993597_6995221_6995314_6997591
transcript_89793.nnic	chr21	-	811	4	NIC	ENSG00000280018.4	novel	710	5	NA	NA	-30	207	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	18.0616229121921	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTGCCTCATGCATT	NA	False	NA	NA	False	AATAAA	-17	NA	6997795	6986242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6986649_6993498_6993597_6995221_6995325_6997591
transcript_89797.known	chr21	-	897	3	FSM	ENSG00000280018.4	ENST00000623347.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	27.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	-1	True	NA	NA	False	ATTAAA	-17	NA	6997737	6994373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6995033_6995221_6995314_6997591
transcript_89798.known	chr21	-	936	3	FSM	ENSG00000280018.4	ENST00000624728.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	3	True	NA	NA	False	ATTAAA	-17	NA	6997765	6994373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6995033_6995221_6995325_6997591
transcript_89806.known	chr21	+	2247	4	FSM	ENSG00000277067.4	ENST00000623095.3	2247	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	91.2152521359352	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7048890	7087097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7049061_7061346_7061406_7081048_7081214_7085244
transcript_89812.nnic	chr21	+	914	3	NNC	ENSG00000277067.4	novel	572	3	NA	NA	-42	-31327	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAATTGTCTGCTTTTC	NA	False	NA	NA	False	ATTAAA	-9	NA	7048848	7052271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_7049061_7051461_7051512_7051619
transcript_89814.known	chr21	+	859	3	FSM	ENSG00000277067.4	ENST00000621909.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	80	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	7	False	NA	NA	False	NA	NA	NA	7048919	7085797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7049061_7081048_7081214_7085244
transcript_89818.known	chr21	+	572	3	FSM	ENSG00000277067.4	ENST00000622911.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAAACCTGGACCTT	4	False	NA	NA	False	NA	NA	NA	7048916	7085500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7049061_7080035_7080208_7085244
transcript_8982.known	chr1	+	2967	23	FSM	ENSG00000131778.20	ENST00000369258.8	2967	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	122.156450288585	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	-37	True	NA	27	True	AATAAA	-15	NA	147242683	147295762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_89821.nnic	chr21	+	742	3	NNC	ENSG00000277067.4	novel	2247	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	9	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7048886	7087097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_7049061_7085244_7085683_7086967
transcript_89825.nnic	chr21	+	626	2	NNC	ENSG00000277067.4	novel	572	3	NA	NA	-42	-31723	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTTATTAAAATTTTTG	NA	False	NA	NA	False	AATAAA	-18	NA	7048848	7051875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_7049061_7051461
transcript_89827.nnic	chr21	+	1029	2	NNC	ENSG00000277067.4	novel	572	3	NA	NA	-42	-31320	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	7048848	7052278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_7049061_7051461
transcript_8983.known	chr1	+	2731	22	FSM	ENSG00000131778.20	ENST00000651820.1	2731	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	197.779854252902	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTCTCTTTTCTGAGTTT	-12	True	NA	NA	False	AATAGA	-40	NA	147242708	147295616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271114_147272170_147272282_147275353_147275469_147276103_147276258_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_89830.nnic	chr21	+	1999	2	NIC	ENSG00000277067.4	novel	859	3	NA	NA	-4	-28	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAAAAAAAGTTGTGCTA	NA	False	NA	NA	False	TATAAA	-39	NA	7048886	7087069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_7049061_7085244
transcript_89831.nnic	chr21	+	2081	2	NIC	ENSG00000277067.4	novel	859	3	NA	NA	-4	54	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCACTCAATATCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	7048886	7087151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_7049061_7085244
transcript_89833.known	chr21	+	2195	2	FSM	ENSG00000277067.4	ENST00000615804.1	2195	2	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCTCAAATTACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	7081003	7087229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7081214_7085244
transcript_89838.known	chr21	+	2247	4	FSM	ENSG00000276077.4	ENST00000625096.3	2247	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	90.4814284198083	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7430668	7468875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7430839_7443124_7443184_7462826_7462992_7467022
transcript_89843.known	chr21	+	994	3	FSM	ENSG00000276077.4	ENST00000624461.3	994	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	76	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCAGGAAAAAGCGTCT	9	False	NA	NA	False	NA	NA	NA	7430729	7467742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7430839_7462826_7462992_7467022
transcript_89848.known	chr21	+	572	3	FSM	ENSG00000276077.4	ENST00000624791.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTCCAAACCTGGACCTT	4	False	NA	NA	False	NA	NA	NA	7430694	7467278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7430839_7461813_7461986_7467022
transcript_8985.known	chr1	+	2862	22	FSM	ENSG00000131778.20	ENST00000650721.1	2862	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	146.4083996946	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	-44	True	NA	-11	True	AATATA	-40	NA	147242676	147295724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_89856.nnic	chr21	+	556	2	NNC	ENSG00000276077.4	novel	572	3	NA	NA	4	-31757	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAGCTATTAATAAAATG	NA	False	NA	NA	False	AATAAA	-21	NA	7430662	7433619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_7430839_7433239
transcript_89857.nnic	chr21	+	993	2	NNC	ENSG00000276077.4	novel	572	3	NA	NA	4	-31320	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	7430662	7434056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_7430839_7433239
transcript_89858.nnic	chr21	+	1358	2	NNC	ENSG00000276077.4	novel	572	3	NA	NA	4	-30955	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTTATTTTCCATTGTAAA	NA	False	NA	NA	False	AATAAA	-9	NA	7430662	7434421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_7430839_7433239
transcript_8986.known	chr1	+	2841	22	FSM	ENSG00000131778.20	ENST00000651420.1	2841	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	156.228610327325	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	-20	True	NA	25	True	AATAAA	-13	NA	147242700	147295760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_89861.nnic	chr21	+	2026	2	NIC	ENSG00000276077.4	novel	2247	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7430665	7468875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_7430839_7467022
transcript_89862.nnic	chr21	+	2080	2	NIC	ENSG00000276077.4	novel	994	3	NA	NA	-3	54	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCACTCAATATCTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	7430665	7468929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_7430839_7467022
transcript_89865.known	chr21	+	2195	2	FSM	ENSG00000276077.4	ENST00000610988.1	2195	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCTCAAATTACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	7462781	7469007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7462992_7467022
transcript_89866.known	chr21	+	1193	5	FSM	ENSG00000273590.5	ENST00000622934.3	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	99.6857562543416	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATCTTGTTTTACAG	NA	False	NA	NA	False	AATAAA	-22	NA	7744970	7772246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7769186_7769376_7771566
transcript_89868.known	chr21	+	843	4	FSM	ENSG00000273590.5	ENST00000619874.5	870	4	24	3	4	-2	multi-exon	FALSE	canonical	3	181	junction_3	18.3726850393609	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	7744974	7758627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7758104
transcript_8987.known	chr1	+	2827	22	FSM	ENSG00000131778.20	ENST00000652616.1	2827	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	152.878384520228	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	-48	True	NA	-11	True	AATATA	-40	NA	147242672	147295724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_89874.nic	chr21	+	1269	4	ISM	ENSG00000278996.1	ENST00000623664.1	2498	7	-20	3933	-20	-3933	5prime_fragment	TRUE	canonical	2	5	junction_2	52.8036194045656	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8197599	8223713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_8197928_8200737_8201053_8222960_8223058_8223184
transcript_89875.nnic	chr21	+	956	4	NNC	ENSG00000278996.1	novel	2498	7	NA	NA	4672	-3933	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	45.2621990922521	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8202291	8223713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8202485_8222430_8222568_8222960_8223058_8223184
transcript_89876.nnic	chr21	+	811	3	NNC	ENSG00000278996.1	novel	2498	7	NA	NA	4680	-3933	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	53.5	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8202299	8223713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8202485_8222960_8223058_8223184
transcript_89881.nnic	chr21	+	717	3	NNC	ENSG00000278996.1	novel	2498	7	NA	NA	25167	-3933	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	2801	False	NA	NA	False	AATAAA	-15	NA	8222786	8223713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8222878_8222960_8223058_8223184
transcript_89882.nic	chr21	+	1398	2	ISM	ENSG00000278996.1	ENST00000623664.1	2498	7	24569	3933	24569	-3933	internal_fragment	FALSE	canonical	3	118	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	2203	False	NA	NA	False	AATAAA	-15	NA	8222188	8223713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_8223058_8223184
transcript_89883.known	chr21	+	153	1	FSM	ENSG00000278233.1	ENST00000612463.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	4	False	NA	NA	False	GGGGCT	-19	NA	8212571	8212724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8212600_8212700
transcript_89889.known	chr21	+	153	1	FSM	ENSG00000277739.1	ENST00000610460.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	4	False	NA	NA	False	GGGGCT	-19	NA	8256780	8256933	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8256800_8256900
transcript_8989.known	chr1	+	2461	21	FSM	ENSG00000131778.20	ENST00000650714.1	2461	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	161.127426281189	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATCAGGATCTGGT	-23	True	NA	NA	False	AATAGA	-9	NA	147242697	147295585	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_89891.known	chr21	+	2520	7	FSM	ENSG00000280441.3	ENST00000623860.3	2520	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	43.3797827974686	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTAAGTGTGTGTTCCC	NA	False	NA	NA	False	AATAAA	-18	NA	8380642	8410645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8380973_8383783_8384099_8405959_8406057_8406183_8407185_8407345_8407438_8409172_8409391_8410178
transcript_89892.nnic	chr21	+	922	4	NNC	ENSG00000280441.3	novel	2520	7	NA	NA	4707	231	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	45.6386775541195	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8385372	8406712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8385532_8405429_8405567_8405959_8406057_8406183
transcript_89896.nnic	chr21	+	952	4	NNC	ENSG00000280441.3	novel	2498	7	NA	NA	49046	231	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	45.2057026884392	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8429711	8450899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8429901_8449636_8449774_8450146_8450244_8450370
transcript_89899.nnic	chr21	+	791	3	NNC	ENSG00000280441.3	novel	2520	7	NA	NA	4701	231	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	54	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8385366	8406712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8385532_8405959_8406057_8406183
transcript_8990.known	chr1	+	2782	21	FSM	ENSG00000131778.20	ENST00000467213.5	2782	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	161.423387400959	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	-37	True	NA	27	True	AATAAA	-15	NA	147242683	147295762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_89905.nnic	chr21	+	819	3	NNC	ENSG00000280441.3	novel	2498	7	NA	NA	49042	231	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	53.5	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8429707	8450899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8429901_8450146_8450244_8450370
transcript_89915.known	chr21	+	153	1	FSM	ENSG00000275215.1	ENST00000613359.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	4	False	NA	NA	False	GGGGCT	-19	NA	8395606	8395759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8395600_8395800
transcript_89916.known	chr21	+	153	1	FSM	ENSG00000278189.1	ENST00000619471.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	4	False	NA	NA	False	GGGGCT	-19	NA	8439822	8439975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8439800_8440000
transcript_89923.known	chr21	+	553	3	FSM	ENSG00000224905.8	ENST00000653756.2	578	3	25	0	19	0	multi-exon	FALSE	canonical	1	1	junction_2	42.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTTTCTTCATTGA	1	True	NA	NA	False	AAAAAG	-20	NA	14027439	14088783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14088583
transcript_89924.known	chr21	+	1332	3	FSM	ENSG00000224905.8	ENST00000428809.5	1332	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	28	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	NA	False	NA	11	True	AATAAA	-27	NA	14027420	14144468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14143508
transcript_89925.known	chr21	+	1084	3	FSM	ENSG00000224905.8	ENST00000432621.5	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	36	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	NA	False	NA	11	True	AATAAA	-27	NA	14027420	14144468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14143756
transcript_89926.known	chr21	+	812	3	FSM	ENSG00000224905.8	ENST00000448463.3	816	3	4	0	-2	0	multi-exon	FALSE	canonical	2	5	junction_2	40.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTCTAAAATGCAGTTT	NA	False	NA	NA	False	NA	NA	NA	14027418	14089046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14088608
transcript_89932.known	chr21	+	680	5	FSM	ENSG00000185272.14	ENST00000468788.5	680	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12.5199840255489	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCCACTTCCTAATAGT	NA	False	NA	NA	False	TATAAA	-44	NA	14216144	14227054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14216283_14219552_14219726_14221096_14221170_14224437_14224538_14226858
transcript_89934.known	chr21	+	1955	5	FSM	ENSG00000185272.14	ENST00000400577.4	1955	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.54835134966506	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	-2	True	NA	NA	False	AATAAA	-18	NA	14216156	14228372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14216283_14219562_14219726_14221096_14221170_14224437_14224538_14226879
transcript_89946.nnic	chr21	+	930	4	NIC	ENSG00000185272.14	novel	1955	5	NA	NA	-34	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.1993265821489	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTCTTTTGAAATATGT	NA	False	NA	4	True	AATAAA	-15	NA	14216095	14227386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_14216283_14219562_14219726_14221096_14221170_14226879
transcript_89948.nnic	chr21	+	1916	4	NIC	ENSG00000185272.14	novel	1955	5	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.1993265821489	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	NA	False	NA	NA	False	AATAAA	-18	NA	14216095	14228372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_14216283_14219562_14219726_14221096_14221170_14226879
transcript_89949.known	chr21	+	1597	4	FSM	ENSG00000185272.14	ENST00000495055.1	1597	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	12.5521135891752	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTATAGCTCATTA	-6	True	NA	NA	False	AATAAA	-13	NA	14216152	14228173	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14216283_14221096_14221170_14224437_14224538_14226879
transcript_89951.known	chr21	-	3945	5	FSM	ENSG00000155304.6	ENST00000285667.4	3945	5	0	0	0	0	multi-exon	TRUE	canonical	3	216	junction_1	14.2214626533279	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTACTTTTTCATTCAG	-5	True	NA	-3	True	AATAAA	-27	NA	14383146	14371114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_14374285_14375651_14375820_14378198_14378413_14381202_14381544_14383094
transcript_89956.nnic	chr21	-	2025	7	NNC	ENSG00000155307.19	novel	1151	7	NA	NA	-460	949	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	15.3152066768802	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTCATGTGTTTGCA	NA	False	NA	NA	False	AATAAA	-24	NA	14616476	14590980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_14592640_14594012_14594079_14602022_14602100_14609481_14609569_14612875_14612914_14615975_14616017_14616419
transcript_89958.nnic	chr21	-	874	7	NNC	ENSG00000155307.19	novel	1151	7	NA	NA	-605	-347	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	15.3152066768802	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGCTCTTAAATTTCCT	NA	False	NA	NA	False	AATAAA	-17	NA	14616621	14592276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_14592640_14594012_14594079_14602022_14602100_14609481_14609569_14612875_14612914_14615975_14616017_14616419
transcript_89964.known	chr21	-	220	3	FSM	ENSG00000155307.19	ENST00000469393.5	220	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	17.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTATAAAAGTCTCT	437	False	NA	0	True	AATAAA	-17	NA	14616016	14612504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_14612646_14612875_14612914_14615975
transcript_89966.known	chr21	+	426	5	FSM	ENSG00000215386.14	ENST00000602901.6	426	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGATTGCTGTGCATT	21	False	NA	NA	False	AATAAA	-20	NA	16279762	16607137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_16279863_16391613_16391686_16487489_16487539_16537378_16537440_16606993
transcript_89970.nnic	chr21	-	618	2	Genic_Genomic	ENSG00000226580.1	novel	146	1	NA	NA	-11775	227	multi-exon	FALSE	canonical	3	6	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTCAAAGCACCG	NA	False	NA	NA	False	AATAAA	-18	NA	17512599	17500451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_-_17500805_17512334
transcript_89971.nnic	chr21	-	784	2	Genic_Genomic	ENSG00000226580.1	novel	146	1	NA	NA	-11753	212	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATAATTTGCATTATA	NA	False	NA	NA	False	AATAAA	-33	NA	17512577	17500466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_-_17501008_17512334
transcript_89975.known	chr21	+	1445	8	FSM	ENSG00000154639.19	ENST00000400169.1	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	392.467807077009	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAATACATTGA	9	False	NA	-23	True	TTTAAA	-29	NA	17513129	17593579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427_17565612_17593151
transcript_89982.known	chr21	+	5593	7	FSM	ENSG00000154639.19	ENST00000284878.12	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_6	125.653513900549	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCATGGTGTGGC	16	True	NA	2	True	AATAAA	-15	NA	17513042	17570100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427
transcript_89996.known	chr21	+	1080	5	FSM	ENSG00000154639.19	ENST00000400166.5	1080	5	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_4	488.800061374792	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCGAAATAGTTACAGGC	19	True	NA	NA	False	AATATA	-24	NA	17513045	17565852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17565427
transcript_9.known	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00025_+_0_2000
transcript_90001.known	chr21	-	1485	6	FSM	ENSG00000154640.15	ENST00000339775.10	1485	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	92.9933330943676	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	30	True	NA	-1	True	AATAAA	-19	NA	17612844	17593652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17594333_17598616_17598825_17604144_17604277_17604859_17604998_17608971_17609153_17612698
transcript_90002.known	chr21	-	1410	5	FSM	ENSG00000154640.15	ENST00000348354.7	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	33.3841279652472	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	16	False	17612917	-1	True	AATAAA	-19	NA	17612901	17593652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17594333_17598616_17598825_17604859_17604998_17608971_17609153_17612698
transcript_90003.known	chr21	+	552	3	FSM	ENSG00000280594.2	ENST00000626994.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACACAATTGTCTTCAAT	-10	True	NA	NA	False	NA	NA	NA	17611743	17633199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_17612088_17626892_17627050_17633148
transcript_90004.known	chr21	-	1593	5	FSM	ENSG00000154642.11	ENST00000400559.7	1593	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	65.2629297534213	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTGTTTTAATTTCT	264	False	NA	-3	True	GATAAA	-19	NA	17819386	17792803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17793579_17795207_17795271_17796581_17797119_17818191_17818326_17819302
transcript_9001.known	chr1	+	2578	19	FSM	ENSG00000131778.20	ENST00000652346.1	2578	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	170.486603868942	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	-24	True	NA	18	True	AATAAA	-6	NA	147242696	147295753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_90013.known	chr21	-	1090	4	FSM	ENSG00000154642.11	ENST00000400558.7	1090	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	72.4538167079938	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTAGGGCTAATCATT	264	False	NA	-17	True	AATAAA	-19	NA	17819386	17793246	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17793582_17796581_17797119_17818191_17818326_17819302
transcript_90019.known	chr21	-	665	2	FSM	ENSG00000154642.11	ENST00000482915.1	665	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATCACACACACTGTT	-8	True	NA	NA	False	TTTAAA	-22	NA	17819362	17817720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17818326_17819302
transcript_9002.known	chr1	+	2505	18	FSM	ENSG00000131778.20	ENST00000361293.10	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	176.100317431026	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	-40	True	NA	18	True	AATAAA	-6	NA	147242680	147295753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_90021.known	chr21	+	2421	7	FSM	ENSG00000154645.14	ENST00000400128.5	2421	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	4.41273409829124	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAGTCCTGTCTAAACC	-6	True	NA	10	True	AATAAA	-24	NA	17901262	18267373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_17901425_17917219_17917401_18256508_18256819_18256969_18257128_18260199_18260287_18262790_18262894_18265953
transcript_90026.nic	chr21	+	1417	3	NIC	ENSG00000154645.14	novel	2421	7	NA	NA	-229	-238121	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAACTAGTCTTGTT	NA	False	NA	NA	False	NA	NA	NA	17901033	18028716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_17901425_17917219_17917401_18027871
transcript_90027.nnic	chr21	+	591	2	Genic_Genomic	ENSG00000198618.5	novel	498	1	NA	NA	-45	218	multi-exon	FALSE	canonical	0	0	junction_1	0	745	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAATTACTTAGAAAATG	NA	False	NA	4	True	AATAAA	-26	NA	18857733	18858494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_+_18857969_18858138
transcript_90032.known	chr21	-	3229	6	FSM	ENSG00000228592.2	ENST00000655729.1	3229	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	103.190309622561	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGGCTTATTCTGGA	NA	False	NA	NA	False	AATAAA	-30	NA	23384800	23352928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_23355415_23362024_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
transcript_90033.known	chr21	-	1784	5	FSM	ENSG00000228592.2	ENST00000262354.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	43.1530705744099	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCCCAGTCTCAAGT	NA	False	NA	NA	False	ATTAAA	-14	NA	23384920	23361103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
transcript_90034.known	chr21	-	2848	4	FSM	ENSG00000228592.2	ENST00000654898.1	2848	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.4882274061286	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAATGACAATAAAA	NA	False	NA	NA	False	AAAAAG	-22	NA	23384846	23361763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_23364194_23372326_23372449_23372947_23373085_23384687
transcript_90040.known	chr21	+	611	1	FSM	ENSG00000213885.4	ENST00000425147.1	611	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	24	False	NA	NA	False	AATACA	-36	NA	25361820	25362431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25361800_25362400
transcript_90041.known	chr21	+	1497	3	FSM	ENSG00000234883.7	ENST00000659862.2	1571	3	74	0	74	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATGGCCCATTTTCTT	116	False	NA	NA	False	AATAAA	-31	NA	25562121	25575168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25562258_25569836_25569922_25573892
transcript_90042.known	chr21	-	1199	11	FSM	ENSG00000154719.14	ENST00000307301.11	1199	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	381.700877651598	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTGTGCTTATACA	NA	False	NA	NA	False	AATAAA	-20	NA	25607517	25585655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25585755_25587700_25587790_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
transcript_90055.known	chr21	-	1074	10	FSM	ENSG00000154719.14	ENST00000352957.9	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	100.700264199636	5230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTGTGCTTATACA	10	True	NA	NA	False	AATAAA	-20	NA	25607481	25585655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25585755_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
transcript_9006.known	chr1	+	2358	17	FSM	ENSG00000131778.20	ENST00000369259.4	2358	17	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	128.062103464491	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGCTTTCTTTCCCT	-37	True	NA	30	True	AATAAA	-18	NA	147242683	147295765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_9008.known	chr1	+	1822	12	FSM	ENSG00000131778.20	ENST00000652587.1	1822	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	161.523889694834	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGCATAATAATAAATT	NA	False	NA	-5	True	NA	NA	NA	147242653	147295730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_90080.known	chr21	+	1757	10	FSM	ENSG00000154721.15	ENST00000400532.5	1757	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	15.4919333848297	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATTTATGTTTCTTTA	11	False	NA	NA	False	AATAAA	-16	NA	25639271	25714573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714230
transcript_90082.known	chr21	+	4351	10	FSM	ENSG00000154721.15	ENST00000480456.6	4351	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	6.09998988058258	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTGTTAAACTTTT	-3	True	NA	15	True	AATAAA	-5	NA	25639257	25717562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714639
transcript_90085.known	chr21	+	5120	10	FSM	ENSG00000154727.11	ENST00000354828.7	5120	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	46.3755469835633	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	9916	False	NA	3	True	AATAAA	-15	NA	25734569	25772460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25735071_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_90089.known	chr21	+	5226	10	FSM	ENSG00000154727.11	ENST00000400075.4	5226	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	21.9443741208437	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	3	True	NA	3	True	AATAAA	-15	NA	25734971	25772460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25735579_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_90100.known	chr21	-	589	5	FSM	ENSG00000154723.13	ENST00000400094.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	2527.54459654029	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-3	True	NA	0	True	AATAAA	-38	NA	25734904	25724479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734332_25734376_25734852
transcript_90109.known	chr21	-	589	4	FSM	ENSG00000154723.13	ENST00000457143.6	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	2421.93490140975	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	675	False	NA	0	True	AATAAA	-38	NA	25735033	25724479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734938
transcript_90110.known	chr21	-	826	4	FSM	ENSG00000154723.13	ENST00000400087.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	2407.42494979364	2709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-30	True	NA	0	True	AATAAA	-38	NA	25735646	25724479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735314
transcript_90111.known	chr21	-	647	4	FSM	ENSG00000154723.13	ENST00000400090.7	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	2411.16933365443	3049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-23	True	NA	0	True	AATAAA	-38	NA	25735639	25724479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735486
transcript_90117.known	chr21	-	526	4	FSM	ENSG00000154723.13	ENST00000284971.8	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	4615	junction_3	391.063791329354	33717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTCTTGATGAATTGA	-3	True	NA	-20	True	AATAAA	-18	NA	25734904	25724499	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734852
transcript_90118.known	chr21	-	1179	4	FSM	ENSG00000154723.13	ENST00000400093.3	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	2382.15257464523	3727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	35	False	NA	0	True	AATAAA	-38	NA	25735673	25724479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734988
transcript_90119.known	chr21	-	3583	18	FSM	ENSG00000142192.21	ENST00000346798.8	3583	18	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_11	192.437937687951	3972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	-5	True	NA	-27	True	AATAAA	-19	NA	26170770	25880549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_25997359_25997417_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_90120.known	chr21	-	3543	17	FSM	ENSG00000142192.21	ENST00000357903.7	3543	17	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_10	200.586396208093	3957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTGTGCTGGTGTGAATG	917	False	NA	-27	True	AATAAA	-19	NA	26170787	25880549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25881772_25891721_25891869_25897572_25897674_25905023_25905078_25911740_25911963_25954589_25954690_25955626_25955756_25975069_25975229_25975953_25976029_25982343_25982478_26000014_26000183_26021839_26022043_26050999_26051194_26053235_26053349_26089942_26090073_26111978_26112147_26170563
transcript_90124.known	chr21	-	619	4	FSM	ENSG00000142192.21	ENST00000491395.5	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	145.977928316426	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGATGTTGGGCTAAG	2559	False	NA	35	True	NA	NA	NA	26051018	25997187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25997417_26000014_26000183_26021839_26022043_26050999
transcript_90129.known	chr21	-	3072	4	FSM	ENSG00000166265.13	ENST00000299340.9	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	58.9594964549581	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTCTTGTGTCCA	16	True	NA	NA	False	AATAAA	-31	NA	26573255	26466208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_26468632_26480271_26480430_26566265_26566369_26572867
transcript_90131.known	chr21	-	3099	4	FSM	ENSG00000166265.13	ENST00000652641.2	3099	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	113.877126763894	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATATTTTCATTGTCTT	-15	True	NA	NA	False	AATAAA	-24	NA	26573286	26466215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_26468635_26480271_26480430_26566265_26566369_26572867
transcript_90133.known	chr21	-	735	4	FSM	ENSG00000166265.13	ENST00000400043.3	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	175.807344050874	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTTTCACCCTGGAA	95	False	NA	NA	False	NA	NA	NA	26573176	26477970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_26478136_26480271_26480430_26566265_26566369_26572867
transcript_90143.nic	chr21	-	631	2	ISM	ENSG00000166265.13	ENST00000400043.3	735	4	15	88061	15	-88061	5prime_fragment	FALSE	canonical	3	416	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTATTCTTTTATTGTTT	-1	True	NA	NA	False	AATAAA	-28	NA	26573161	26566031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_26566369_26572867
transcript_90144.nic	chr21	-	2601	5	ISM	ENSG00000154734.16	ENST00000517777.6	4180	9	2673	492	144	0	3prime_fragment	TRUE	canonical	3	77	junction_1	11.4891252930761	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTTTTTTGA	5064	False	NA	-4	True	AATAAA	-16	NA	26840345	26836286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_26838279_26838438_26838615_26839586_26839763_26839874_26840062_26840275
transcript_90147.nnic	chr21	+	2342	3	Antisense	novelGene_ENSG00000236532.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATATCTTACTTTTTAA	NA	False	NA	NA	False	GATAAA	-16	NA	28161640	28168769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr21_+_28161988_28163569_28163763_28166967
transcript_90151.known	chr21	+	544	4	FSM	ENSG00000232079.7	ENST00000616647.4	544	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACAACAAACTTTTCTC	224	False	NA	NA	False	NA	NA	NA	28090355	28102639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_28090522_28095880_28096115_28101265_28101320_28102549
transcript_90154.known	chr21	+	874	2	FSM	ENSG00000232079.7	ENST00000423808.2	874	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAGCTCAATGTTACTA	NA	False	NA	NA	False	GATAAA	-11	NA	28089888	28102790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_28090522_28102549
transcript_90159.known	chr21	-	1293	7	FSM	ENSG00000156239.12	ENST00000460212.1	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	37.1008385649465	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-7	True	NA	-4	True	AATAAA	-17	NA	28885371	28872190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_28872740_28876311_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_9016.known	chr1	-	2331	9	FSM	ENSG00000131781.13	ENST00000254090.9	2331	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	6.12244844812923	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTAGGCTCACAGTCAT	12	True	NA	-5	True	AATAAA	-15	NA	147225339	147186260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225067_147225286
transcript_90161.nic	chr21	-	1234	6	NIC	ENSG00000156239.12	novel	1293	7	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	43.3525085779358	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	NA	False	NA	-4	True	AATAAA	-17	NA	28885396	28872190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_28872740_28876311_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_90162.known	chr21	-	4861	6	FSM	ENSG00000156239.12	ENST00000303775.10	4861	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	25.1507455157894	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-3	True	NA	-4	True	AATAAA	-17	NA	28885367	28872190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_90164.known	chr21	-	4781	5	FSM	ENSG00000156239.12	ENST00000351429.7	4781	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	34.2226167906547	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-7	True	NA	-4	True	AATAAA	-17	NA	28885371	28872190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_90168.known	chr21	-	7756	30	FSM	ENSG00000198862.14	ENST00000614971.4	7756	30	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_8	16.2545886688742	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCGCCATTCTCCTCC	-1	True	NA	-7	True	AATAAA	-26	NA	28992956	28928143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_28930511_28931154_28931323_28932469_28932665_28935108_28935330_28936525_28936698_28941219_28941407_28943261_28943337_28943666_28943905_28944382_28944597_28945806_28945952_28946151_28946288_28947463_28947607_28952159_28952265_28953216_28953377_28956761_28956949_28957331_28957477_28958385_28958540_28959457_28959698_28960516_28960707_28965864_28965907_28966369_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_90171.nic	chr21	-	1742	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	9	5567	9	11	5prime_fragment	FALSE	canonical	3	89	junction_2	10.7542698956114	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGGTTAGATTTGCTG	9818	False	NA	NA	False	AGTAAA	-9	NA	28992940	28966883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_90172.nic	chr21	-	1570	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	9	5739	9	-161	5prime_fragment	FALSE	canonical	3	89	junction_2	10.7542698956114	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCACAACTTGGAGAAC	9818	False	NA	16	True	AAAAAG	-10	NA	28992940	28967055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_90174.known	chr21	+	3004	19	FSM	ENSG00000156256.15	ENST00000334352.8	3004	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.6199321833602	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	-24	True	NA	8	True	AATAAA	-17	NA	29024650	29054488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_29024778_29025708_29025772_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_90175.known	chr21	+	2924	18	FSM	ENSG00000156256.15	ENST00000399976.7	2924	18	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	14.58467698539	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	-7	True	NA	8	True	AATAAA	-17	NA	29024667	29054488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_90176.known	chr21	+	2960	18	FSM	ENSG00000156256.15	ENST00000399975.7	2960	18	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	16.4531420206884	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	NA	False	NA	8	True	AATAAA	-17	NA	29024628	29054488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_9019.known	chr1	+	662	6	FSM	ENSG00000131778.20	ENST00000492728.1	662	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_5	14.8243043681651	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACACATGTACAGCTGTCC	25	True	NA	NA	False	NA	NA	NA	147242745	147260046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836
transcript_90202.nic	chr21	+	744	6	ISM	ENSG00000156256.15	ENST00000474835.5	3835	17	-60	17145	-38	2424	5prime_fragment	FALSE	canonical	3	42	junction_5	21.9034243898072	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAGAAAAGAAGGAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	29024590	29037343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275
transcript_90203.nic	chr21	+	741	6	ISM	ENSG00000156256.15	ENST00000399975.7	2960	18	-38	17145	-38	2424	5prime_fragment	FALSE	canonical	3	32	junction_5	25.4354083906667	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAGAGAAAAGAAGGAAAA	NA	False	NA	NA	False	AATAAA	-31	NA	29024590	29037343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278
transcript_90211.known	chr21	-	636	1	FSM	ENSG00000273254.1	ENST00000608809.1	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTTGTTTGAGACG	NA	False	NA	NA	False	AATAAA	-16	NA	29024890	29024254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29024300_29024900
transcript_90212.known	chr21	-	1862	16	FSM	ENSG00000156261.13	ENST00000626972.2	1862	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	855.224867115856	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTATTGTCTAATGA	296	False	NA	-25	True	AATAAA	-16	NA	29073351	29056328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29071951_29071989_29073259
transcript_90232.known	chr21	-	1854	15	FSM	ENSG00000156261.13	ENST00000286788.9	1854	15	0	0	0	0	multi-exon	FALSE	canonical	3	2129	junction_9	166.806392110673	18906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTGTCTAATGACCA	-1	True	NA	-22	True	AATAAA	-19	NA	29073648	29056325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073530
transcript_90233.known	chr21	-	1872	15	FSM	ENSG00000156261.13	ENST00000470450.5	1872	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_14	657.309641102057	5211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	8	True	NA	-20	True	AATAAA	-21	NA	29073639	29056323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073505
transcript_90234.known	chr21	+	5618	5	FSM	ENSG00000156273.16	ENST00000286800.8	5618	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	18.8878267675241	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	-2	True	NA	14	True	AATAAA	-27	NA	29298921	29346148	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_29298954_29321220_29321515_29326058_29327394_29329486_29329694_29342398
transcript_90236.nnic	chr21	+	417	3	NNC	ENSG00000156273.16	novel	850	5	NA	NA	107015	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTGTGTGTGTGTGTGT	0	True	NA	11	True	AATAAA	-24	NA	29434290	29630751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_29434370_29597569_29597695_29630538
transcript_90238.nnic	chr21	+	861	3	Genic_Genomic	ENSG00000186971.3	novel	797	1	NA	NA	-3292	0	multi-exon	FALSE	canonical	1	2	junction_1	1	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTCACATTGTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	30426937	30431026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_+_30427107_30427349_30427437_30430421
transcript_90239.nnic	chr21	+	759	2	Genic_Genomic	ENSG00000186971.3	novel	797	1	NA	NA	-2947	0	multi-exon	FALSE	canonical	1	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTCACATTGTTAT	NA	False	NA	NA	False	AATAAA	-23	NA	30427282	30431026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_+_30427437_30430421
transcript_90241.known	chr21	+	822	2	FSM	ENSG00000237594.2	ENST00000433071.2	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGGTCTCTTTTCTTTC	2	True	NA	27	True	NA	NA	NA	31559244	31560487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_31559596_31560016
transcript_90252.known	chr21	+	865	5	FSM	ENSG00000142168.15	ENST00000389995.4	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1068.55542088373	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	2	False	NA	59	True	ATTAAA	-22	NA	31659665	31668931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_31659785_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_90266.known	chr21	-	520	1	FSM	ENSG00000273271.1	ENST00000609934.1	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTTAAGTGTCCCCATT	1376	False	NA	-4	True	AATAAA	-16	NA	31667247	31666727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_31666700_31667200
transcript_90267.known	chr21	+	895	5	FSM	ENSG00000142168.15	ENST00000270142.11	895	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1068.55542088373	28681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	1	True	NA	59	True	ATTAAA	-22	NA	31659692	31668931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_31659842_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_90270.nnic	chr21	-	881	2	Antisense	novelGene_ENSG00000142149.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCTGTGCTGAAGGG	NA	False	NA	-1	True	ATTAAA	-19	NA	31874140	31871858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr21_-_31872457_31873857
transcript_90275.known	chr21	-	1546	5	FSM	ENSG00000159055.4	ENST00000290130.4	1546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1026	junction_1	15.2704780540755	1810	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTAAGATTGATTTTT	-15	True	NA	-22	True	AATAAA	-13	NA	32279049	32268227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32269118_32269706_32269804_32270406_32270530_32274829_32274897_32278680
transcript_90276.known	chr21	-	10818	39	FSM	ENSG00000142207.7	ENST00000382751.4	10818	39	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_21	21.4633779447175	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCGGATATGTCTT	6	True	NA	NA	False	ATTAAA	-21	NA	32393012	32311017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322585_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
transcript_90277.known	chr21	+	831	1	FSM	ENSG00000256073.3	ENST00000534991.3	831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGGTACATATTTTAA	-12	True	NA	NA	False	AATAAA	-24	NA	32393129	32393960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32393100_32394000
transcript_90278.known	chr21	-	4781	8	FSM	ENSG00000265590.10	ENST00000673807.1	4781	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	422.504389543675	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAGAGCAAACATATA	-16	True	NA	NA	False	NA	NA	NA	32612865	32573784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_90279.known	chr21	-	3883	7	FSM	ENSG00000265590.10	ENST00000673945.1	3883	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	403.747205012686	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTACGGCAGGAAATTTG	314	False	NA	NA	False	AATAAA	-13	NA	32612535	32574136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32576924_32578693_32578832_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_90280.known	chr21	-	3979	5	FSM	ENSG00000265590.10	ENST00000673672.1	3979	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	403.861671863028	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAAACATGGTCCAAAT	4	True	NA	NA	False	AATAAA	-1	NA	32604433	32573739	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160_32603293_32604124
transcript_90284.known	chr21	+	1671	8	FSM	ENSG00000166979.13	ENST00000300255.7	1671	8	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	5.79936660862413	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCTGTATTTCTTT	19	True	NA	5	True	AATAAA	-17	NA	32412705	32515387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32413014_32453311_32453509_32457596_32457721_32467695_32467849_32495026_32495171_32501414_32501496_32503925_32504016_32514813
transcript_90286.known	chr21	+	492	5	FSM	ENSG00000166979.13	ENST00000496615.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	6.64736790015417	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGGTCATCAGAGAGT	NA	False	NA	NA	False	NA	NA	NA	32493652	32514880	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32493763_32495026_32495171_32501414_32501496_32503925_32504016_32514813
transcript_90304.known	chr21	-	863	5	FSM	ENSG00000159079.19	ENST00000458138.1	863	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	348.707165828292	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGCTTTCAGACTACG	294	False	NA	-40	True	NA	NA	NA	32612555	32603224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32609955_32612104
transcript_90307.known	chr21	-	2503	5	FSM	ENSG00000159079.19	ENST00000382549.8	2503	5	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_4	47.5341982156005	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-1	True	NA	NA	False	AATAAA	-19	NA	32612586	32601666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_90308.known	chr21	-	3516	7	FSM	ENSG00000159079.19	ENST00000290155.8	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_6	72.7682775818022	2328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCGACCATCAAACTG	1	True	NA	NA	False	AATAAA	-19	NA	32612377	32599353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_90309.known	chr21	-	1082	6	FSM	ENSG00000159079.19	ENST00000440966.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	331.537388540116	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	26	True	NA	NA	False	AATAAA	-19	NA	32612352	32601666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32601974_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_9031.known	chr1	+	1571	2	FSM	ENSG00000180867.11	ENST00000440377.2	1571	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGCATACTAATTCCC	25	True	NA	NA	False	TATAAA	-19	NA	147172770	147175205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147173560_147174423
transcript_90310.known	chr21	-	1243	6	FSM	ENSG00000159079.19	ENST00000300260.7	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	372.044298437699	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTACTGCCCTCTGT	246	False	NA	NA	False	TTTAAA	-12	NA	32612603	32601784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32609837_32610006_32612104
transcript_90312.known	chr21	+	2945	2	FSM	ENSG00000238197.7	ENST00000458479.1	2945	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTCACCTATTTTGGA	3	True	NA	NA	False	AATAAA	-21	NA	32728114	32732916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32730662_32732518
transcript_90313.known	chr21	+	2453	4	FSM	ENSG00000205930.10	ENST00000382375.8	2453	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAATAATAATAATGA	NA	False	NA	NA	False	NA	NA	NA	32772099	32798969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32772309_32784796_32784920_32788611_32788702_32796938
transcript_90314.known	chr21	+	3352	4	FSM	ENSG00000205930.10	ENST00000382378.6	3352	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGACAGAGTGAGTGAGAC	7	True	NA	NA	False	NA	NA	NA	32772160	32799917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32772321_32784796_32784920_32788611_32788702_32796938
transcript_90316.nic	chr21	+	1267	9	NIC	ENSG00000159110.21	novel	726	6	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	44.0511066830335	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGACTCTCTCTCTCTTT	289	False	NA	13	True	AATAAA	-20	NA	33230364	33262757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_33230558_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708_33248855_33252661_33252831_33260596_33260728_33262560
transcript_90319.known	chr21	+	1941	7	FSM	ENSG00000243646.10	ENST00000290200.7	1941	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	5.64702478203247	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCATGATACTACCTG	-11	True	NA	18	True	ATTAAA	-24	NA	33266366	33297221	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33266515_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_90322.known	chr21	+	786	6	FSM	ENSG00000243646.10	ENST00000422891.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	13.5262707351287	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATGATGTTTTTGACA	4	True	NA	NA	False	NA	NA	NA	33266381	33296239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33266515_33268393_33268518_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_90326.known	chr21	+	6075	11	FSM	ENSG00000142166.13	ENST00000270139.8	6075	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	15.0253119767944	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCACTACCTTTT	-23	True	NA	NA	False	AAGAAA	-42	NA	33324969	33359864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388_33349544_33352757_33352909_33353637_33353784_33355315
transcript_90337.known	chr21	+	1397	7	FSM	ENSG00000142166.13	ENST00000652513.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	65.8341772097813	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAAAGCGCCTTT	-18	True	NA	NA	False	AATAAA	-23	NA	33324974	33349077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33348549
transcript_90340.known	chr21	+	1282	6	FSM	ENSG00000142166.13	ENST00000652601.1	1282	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	74.1404073363507	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAAAGCGCCTTT	-18	True	NA	NA	False	AATAAA	-23	NA	33324974	33349077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33348549
transcript_90342.known	chr21	+	783	5	FSM	ENSG00000142166.13	ENST00000652654.1	783	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	80.2694680435843	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAGTTCCATTCCATAA	509	False	NA	NA	False	NA	NA	NA	33324903	33345358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343534_33343677_33345245
transcript_9035.known	chr1	+	3021	24	FSM	ENSG00000131778.20	ENST00000651231.1	3021	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	172.458515326169	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTGTTCCTAATGGT	8	True	NA	11	True	NA	NA	NA	147242728	147295746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147293924_147294015_147294383_147294518_147295430
transcript_9036.known	chr1	+	2937	23	FSM	ENSG00000131778.20	ENST00000622533.4	2937	23	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	125.885565573797	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	-37	True	NA	25	True	AATAAA	-13	NA	147242683	147295760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254897_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264589_147265935_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_90365.known	chr21	-	3062	9	FSM	ENSG00000142188.17	ENST00000420455.5	3062	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	49.1928602543093	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	10	True	NA	-3	True	AATAAA	-45	NA	33479943	33432484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33432803_33439213_33439298_33448781_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_90371.known	chr21	-	982	8	FSM	ENSG00000142188.17	ENST00000442441.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	86.0306067985252	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGTTACATCATCTTG	17	True	NA	46	True	NA	NA	NA	33479936	33450546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33450864_33455726_33455785_33456003_33456098_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_90375.known	chr21	+	1699	7	FSM	ENSG00000159128.15	ENST00000290219.11	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_5	22.2442252181449	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	-16	True	NA	21	True	AATAAA	-27	NA	33403412	33437516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33403617_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_90379.known	chr21	-	2332	7	FSM	ENSG00000142188.17	ENST00000542230.7	2332	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	34.6538437823121	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATATTGTTGTTTGTT	-21	True	NA	-4	True	AATAAA	-17	NA	33479974	33449140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_90398.known	chr21	-	695	4	FSM	ENSG00000142188.17	ENST00000484377.5	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.0277457017791	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	NA	False	NA	-3	True	AATAAA	-45	NA	33448964	33432484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33432803_33436882_33436993_33439213_33439298_33448781
transcript_90406.known	chr21	-	1485	2	FSM	ENSG00000177692.12	ENST00000381947.4	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATAACTGAA	10	True	NA	NA	False	NA	NA	NA	33491716	33488054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33489425_33491601
transcript_90408.nnic	chr21	-	1336	2	NNC	ENSG00000177692.12	novel	1485	2	NA	NA	-46	-8	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTATCATAAATCAT	NA	False	NA	NA	False	ATTAAA	-16	NA	33491762	33488226	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_33489425_33491624
transcript_90417.nnic	chr21	-	564	5	NIC	ENSG00000241837.7	novel	816	8	NA	NA	-40	1	combination_of_known_splicesites	FALSE	canonical	3	312	junction_2	1742.66927083139	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTTCACTGTCTTTTA	NA	False	NA	-26	True	AATAAA	-21	NA	33915854	33903451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_33903640_33903934_33904022_33912288_33912400_33914449_33914501_33915727
transcript_90422.known	chr21	-	3318	22	FSM	ENSG00000159131.17	ENST00000381815.9	3318	22	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_10	317.746515437325	2731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGTTTTCTTGGTCTT	-6	True	NA	-9	True	AATAGA	-43	NA	33542117	33503932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_90431.known	chr21	-	2149	11	FSM	ENSG00000159131.17	ENST00000361093.9	2149	11	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_10	94.1119014790372	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTTTTGATTTCTT	-3	True	NA	-4	True	AATAAA	-15	NA	33542114	33524008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_90433.known	chr21	+	8393	12	FSM	ENSG00000159140.21	ENST00000356577.10	8393	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_11	238.899923720622	4986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGTTTTATTTTCTGG	-24	True	NA	15	True	AATAAA	-1	NA	33543037	33577481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33543170_33546212_33546380_33549475_33555392_33557155_33557317_33559229_33559377_33559586_33559776_33567156_33567268_33568970_33569088_33573307_33573456_33575595_33575668_33575777_33575894_33576364
transcript_90435.known	chr21	-	2500	10	FSM	ENSG00000159147.18	ENST00000303071.10	2500	10	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_4	36.1389636176527	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGGGTAAAGAAATAAT	-4	True	NA	-5	True	AATAAA	-19	NA	33588684	33577550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33578445_33579349_33579563_33581301_33581501_33581950_33582056_33582164_33582247_33583487_33583667_33584589_33584769_33585977_33586182_33587521_33587603_33588320
transcript_90439.known	chr21	+	500	6	FSM	ENSG00000159140.21	ENST00000484294.5	500	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	351.401422877028	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGCCAGCCCTAATAA	NA	False	NA	NA	False	GATAAA	-20	NA	33571734	33576447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33571789_33572550_33572631_33573307_33573456_33575595_33575668_33575777_33575894_33576417
transcript_9044.known	chr1	-	6956	10	FSM	ENSG00000162836.12	ENST00000583509.7	6956	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	11.8769410369447	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTTGGCACCCAGG	-3	True	NA	NA	False	AATAAA	-23	NA	147670524	147642229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_90440.known	chr21	-	806	6	FSM	ENSG00000159131.17	ENST00000476524.1	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	1481	junction_5	94.0693361303246	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAAATGAAAAAATAATCG	7497	False	NA	NA	False	CATAAA	-44	NA	33542079	33531335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_90447.known	chr21	-	715	4	FSM	ENSG00000159131.17	ENST00000441403.1	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	765.976936119272	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAGGTAGGTAAATGG	7213	False	NA	NA	False	NA	NA	NA	33542363	33534586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33534754_33535224_33535321_33539170_33539324_33542064
transcript_90448.known	chr21	-	3490	22	FSM	ENSG00000159131.17	ENST00000381831.7	3490	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_21	411.157522047825	1865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTTTTCTTGGTCTTTT	14	True	NA	-7	True	AATAGA	-45	NA	33542842	33503930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539324_33542586
transcript_90450.known	chr21	+	5408	29	FSM	ENSG00000205726.15	ENST00000399352.5	5408	29	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_23	49.8538041248036	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAATGTCTCTGTGTT	2	True	NA	19	True	ATTAAA	-19	NA	33642495	33838498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_90453.nic	chr21	+	2284	17	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-98	42839	0	19375	5prime_fragment	FALSE	canonical	3	345	junction_12	38.2225698213765	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAAGCCCAAAGGTGAGT	NA	False	NA	29	True	AAAACA	-5	NA	33642399	33794454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340
transcript_90454.known	chr21	+	3913	29	FSM	ENSG00000205726.15	ENST00000399353.5	3913	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	88.1174063163367	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTCCTCAAAGAGACC	NA	False	NA	NA	False	NA	NA	NA	33642399	33837018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750253_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_90456.nic	chr21	+	1628	12	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-98	64993	0	0	5prime_fragment	FALSE	canonical	3	382	junction_6	38.112491173775	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATTGAGAGGCGA	NA	False	NA	NA	False	NA	NA	NA	33642399	33772300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060
transcript_90457.nic	chr21	+	1369	11	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-98	69484	0	-4473	5prime_fragment	FALSE	canonical	3	382	junction_6	36.9839154227889	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAGAAATTACCTGG	NA	False	NA	9	True	NA	NA	NA	33642399	33767809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712
transcript_90462.nic	chr21	+	1013	6	NIC	ENSG00000205726.15	novel	3913	29	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	184.385899677822	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTCACTTGGCCAC	NA	False	NA	2	True	AATATA	-17	NA	33642399	33735626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33735305
transcript_90474.known	chr21	-	612	3	FSM	ENSG00000205758.12	ENST00000399442.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTTGATTTTTGAAT	2211	False	NA	NA	False	AATAAA	-13	NA	33641721	33639744	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33640189_33641178_33641306_33641680
transcript_90475.known	chr21	-	1482	13	FSM	ENSG00000205758.12	ENST00000381540.7	1482	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	98.9453763447287	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGTAACGTATTAATT	-5	True	NA	-27	True	GATAAA	-26	NA	33641747	33589466	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33589922_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_90476.known	chr21	-	1018	2	FSM	ENSG00000205758.12	ENST00000468349.1	1018	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACGTATTAATTTTGTAT	4010	False	NA	-21	True	GATAAA	-32	NA	33591718	33589460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33589922_33591161
transcript_90477.known	chr21	-	1935	11	FSM	ENSG00000205758.12	ENST00000429827.5	1935	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	143.362338150576	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTACGTAATTAGTAT	1	True	NA	NA	False	NA	NA	NA	33641741	33594642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599286_33602233_33602346_33603403_33603538_33613537_33613607_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_90478.known	chr21	-	627	6	FSM	ENSG00000205758.12	ENST00000413017.2	627	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	129.777347792286	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCTGGTTTTTGGAA	2210	False	NA	-18	True	AATAAA	-13	NA	33641722	33616286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33616604_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_9048.nic	chr1	-	1773	10	NIC	ENSG00000162836.12	novel	6956	10	NA	NA	0	0	intron_retention	FALSE	canonical	3	23	junction_3	26.7004415740061	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	-3	True	NA	-2	True	AATAAA	-17	NA	147670524	147647367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_147647567_147648245_147648412_147650142_147650239_147652591_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_90497.known	chr21	+	9124	3	FSM	ENSG00000237945.8	ENST00000427447.5	9124	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATAATGTCAGCCTGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	33931159	33977691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33931743_33945809_33945896_33969236
transcript_90498.known	chr21	+	2090	3	FSM	ENSG00000237945.8	ENST00000400353.6	2090	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAGTGATCTACCCTC	NA	False	NA	NA	False	NA	NA	NA	33931213	33971186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33931268_33945809_33945896_33969236
transcript_90507.known	chr21	+	207	2	FSM	ENSG00000237945.8	ENST00000622171.1	207	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCGTGATCCTGGGGG	NA	False	NA	-48	True	NA	NA	NA	33931222	33938301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33931353_33938224
transcript_90509.known	chr21	+	728	2	FSM	ENSG00000237945.8	ENST00000599421.1	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	NA	False	NA	23	True	ATTAAA	-16	NA	33931162	33938372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33931743_33938224
transcript_90510.known	chr21	-	591	2	FSM	ENSG00000273102.2	ENST00000607953.2	592	2	0	1	0	-1	multi-exon	FALSE	canonical	3	23	junction_1	0	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTATTTGGTAATACG	NA	False	NA	-5	True	AATAAA	-18	NA	33968573	33967100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33967351_33968232
transcript_90511.known	chr21	-	756	7	FSM	ENSG00000241837.7	ENST00000290299.7	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	3758	junction_6	292.625281812005	33212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	15	False	33915819	-27	True	AATAAA	-20	NA	33915804	33903452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_90512.known	chr21	-	583	6	FSM	ENSG00000241837.7	ENST00000431254.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1729.64789480403	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	58	False	NA	-27	True	AATAAA	-20	NA	33915761	33903452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33912288_33912400_33914449_33914501_33915727
transcript_90513.known	chr21	-	816	8	FSM	ENSG00000241837.7	ENST00000652380.1	816	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1938.44804323627	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTTCACTGTCTT	5	True	NA	-29	True	AATAAA	-18	NA	33915814	33903454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33903640_33903934_33904022_33906448_33906501_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_90514.known	chr21	-	2839	6	FSM	ENSG00000241837.7	ENST00000491703.5	2839	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1760.10329242349	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	18	True	NA	-27	True	AATAAA	-20	NA	33915768	33903452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33903640_33903934_33904022_33906448_33907454_33909081_33909212_33912288_33912400_33914449
transcript_90518.nnic	chr21	+	734	4	Fusion	ENSG00000214955.5_ENSG00000243927.6	novel	931	3	NA	NA	0	75061	multi-exon	FALSE	canonical	1	2	junction_2	643.467170879758	50	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGCTGCTTACAAGAGA	21	True	NA	NA	False	ATTAAA	-19	NA	34073577	34218095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr21_+_34073746_34125340_34125481_34215499_34215541_34217710
transcript_90519.known	chr21	+	1061	5	FSM	ENSG00000243927.6	ENST00000477091.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	566.922393277951	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	-8	True	NA	19	True	AATAAA	-19	NA	34073548	34143034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34073746_34102834_34102909_34103496_34103520_34125340_34125481_34142407
transcript_9052.known	chr1	-	891	2	FSM	ENSG00000265107.3	ENST00000430508.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTGGGCATAGTCC	-5	True	NA	NA	False	NA	NA	NA	147773354	147758483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_147759272_147773251
transcript_90529.nnic	chr21	+	858	2	NIC	ENSG00000243927.6	novel	931	3	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	0	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	304	False	NA	15	True	AATAAA	-15	NA	34073510	34143030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_34073746_34142407
transcript_90530.known	chr21	+	11566	2	FSM	ENSG00000198743.7	ENST00000381151.5	11566	2	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	0	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGTGACTAAGTATT	21	True	NA	12	True	AATAAA	-13	NA	34073577	34106260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34073746_34094862
transcript_90531.known	chr21	+	931	3	FSM	ENSG00000243927.6	ENST00000399312.3	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	1362	junction_2	2.5	9494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	21	True	NA	15	True	AATAAA	-15	NA	34073577	34143030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34073746_34125340_34125481_34142407
transcript_90532.known	chr21	+	909	5	FSM	ENSG00000243927.6	ENST00000488492.5	909	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	569.548066452692	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	17	False	NA	19	True	AATAAA	-19	NA	34073223	34143034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34073269_34102834_34102909_34103496_34103520_34125340_34125481_34142407
transcript_90533.known	chr21	+	655	2	FSM	ENSG00000227456.9	ENST00000428914.2	655	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTCCAAGGCAATTGTT	NA	False	NA	NA	False	TATAAA	-18	NA	34180676	34183245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34180794_34182707
transcript_90534.nnic	chr21	+	551	4	NIC	ENSG00000272657.1	novel	641	6	NA	NA	-28	-35107	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	1.88561808316413	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTTTGTTGATGAAGCA	7	True	NA	30	True	AATAAA	-39	NA	34073563	34324926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_34073746_34262819_34262922_34293680_34293757_34324735
transcript_90535.nnic	chr21	+	1368	4	NIC	ENSG00000272657.1	novel	641	6	NA	NA	-28	-34290	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	1.88561808316413	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATGTCCATGATTATT	7	True	NA	NA	False	AATAAA	-20	NA	34073563	34325743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_34073746_34262819_34262922_34293680_34293757_34324735
transcript_90541.nic	chr21	-	1077	2	ISM	ENSG00000225555.2	ENST00000440403.2	2643	3	-303	17416	-303	-17416	5prime_fragment	FALSE	canonical	2	3	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCGTCTGTGTGAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	34375667	34370514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_34371161_34375236
transcript_90544.known	chr21	+	1220	5	FSM	ENSG00000205670.12	ENST00000481710.5	1220	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	99.6857562543416	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375479	34402777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34399710_34399900_34402090
transcript_90546.known	chr21	+	840	4	FSM	ENSG00000205670.12	ENST00000399292.8	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_3	18.3726850393609	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	-4	True	NA	NA	False	AATAAA	-18	NA	34375506	34389151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34388628
transcript_90550.known	chr21	+	1033	4	FSM	ENSG00000205670.12	ENST00000399299.5	1033	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	87.5226954693594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375499	34402777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34375568_34379427_34379517_34399710_34399900_34402090
transcript_90551.known	chr21	+	1074	4	FSM	ENSG00000205670.12	ENST00000399295.2	1074	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	96.1330097081931	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	93	False	NA	NA	False	AATAAA	-20	NA	34375603	34389153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34375897_34379427_34379517_34385477_34385645_34388628
transcript_90555.known	chr21	-	2408	4	FSM	ENSG00000159200.18	ENST00000381132.6	2408	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	20.2868320729373	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATTTTATTTCTAGA	NA	False	NA	0	True	AATAAA	-28	NA	34526963	34516483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34526662
transcript_90556.nnic	chr21	+	1083	4	NNC	ENSG00000234380.2	novel	2632	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	11.7851130197758	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGCTTTGTGATCA	-11	True	NA	16	True	TATAAA	-32	NA	34745811	34782884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_34746017_34747780_34748289_34782124_34782191_34782580
transcript_90557.known	chr21	+	2632	3	FSM	ENSG00000234380.2	ENST00000420877.1	2632	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1.5	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGATGGAGATAGCAGAA	NA	False	NA	NA	False	NA	NA	NA	34745756	34784886	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34746017_34782124_34782191_34782580
transcript_90561.known	chr21	-	3258	12	FSM	ENSG00000185917.14	ENST00000399212.5	3258	12	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_11	95.1564175536936	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-27	True	NA	-7	True	ATTAAA	-17	NA	36060526	36034540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058974_36060346
transcript_90569.known	chr21	-	1208	8	FSM	ENSG00000185917.14	ENST00000399205.5	1208	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	117.818781635707	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	13	True	NA	-9	True	AATAAA	-15	NA	36060313	36043685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36057383_36057478_36058815_36058974_36060281
transcript_90576.nic	chr21	-	1262	7	NIC	ENSG00000185917.14	novel	1165	7	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	96.2157587000291	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	-11	True	NA	-9	True	AATAAA	-15	NA	36060510	36043685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060281
transcript_90579.known	chr21	-	1165	7	FSM	ENSG00000185917.14	ENST00000399208.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	101.944020586464	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	191	False	NA	-9	True	AATAAA	-15	NA	36060364	36043685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060281
transcript_90580.nic	chr21	-	1527	7	NIC	ENSG00000185917.14	novel	1165	7	NA	NA	-265	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_6	87.6820328738385	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	NA	False	NA	-9	True	AATAAA	-15	NA	36060791	36043685	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060346
transcript_90589.known	chr21	+	1208	3	FSM	ENSG00000159228.13	ENST00000290349.11	1208	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	2.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGTACAGATTGTTT	31	True	NA	31	True	AATAAA	-17	NA	36070023	36073164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36070405_36070949_36071058_36072445
transcript_90592.nnic	chr21	+	767	2	FSM	ENSG00000233393.2	ENST00000685204.1	502	2	-265	0	-254	0	multi-exon	FALSE	canonical	3	46	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATCTATCTTTTCCTTT	-1	True	NA	16	True	ATTAAA	-16	NA	36104626	36107851	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36105124_36107581
transcript_90593.known	chr21	-	2991	12	FSM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	72.6041002416587	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-27	True	NA	-7	True	ATTAAA	-17	NA	36060526	36034540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_90594.known	chr21	+	2336	2	FSM	ENSG00000233393.2	ENST00000422473.1	2336	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTGTCTGAGGAGTT	8	False	NA	12	True	AGTAAA	-15	NA	36104880	36109690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36105124_36107597
transcript_90595.known	chr21	+	998	3	FSM	ENSG00000159231.6	ENST00000290354.6	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGATGCTGTGGTTTG	-3	True	NA	12	True	AATAAA	-20	NA	36135078	36146562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36135482_36137824_36137933_36146075
transcript_90598.known	chr21	-	741	3	FSM	ENSG00000236830.8	ENST00000427491.2	752	3	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGGCTTTGTGTTAGA	12	False	NA	NA	False	AATAAA	-29	NA	36156306	36141395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36141947_36146255_36146356_36156216
transcript_90599.known	chr21	+	4224	17	FSM	ENSG00000159256.13	ENST00000400485.6	4224	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	22.1016826282525	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCAAATGCTACTTTTA	-25	True	NA	15	True	AATAAA	-22	NA	36320196	36376632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
transcript_90602.known	chr21	+	4466	14	FSM	ENSG00000159259.8	ENST00000314103.6	4466	14	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_11	29.1086517974889	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTCATAGTCTAAA	-10	True	NA	16	True	AATAAA	-17	NA	36385391	36419015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36408760_36408831_36409373_36409466_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_90615.known	chr21	+	1290	5	FSM	ENSG00000159256.13	ENST00000492336.5	1290	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.0655712551313	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGCAATGAGAAGA	-33	True	NA	NA	False	AAAAAG	-7	NA	36320188	36339527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773
transcript_90616.known	chr21	+	4131	16	FSM	ENSG00000159256.13	ENST00000487909.5	4131	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.8229321883147	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAAGACTTAATATTA	9	True	NA	29	True	AATAAA	-36	NA	36320230	36376646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36320304_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
transcript_90617.known	chr21	-	539	2	FSM	ENSG00000286517.1	ENST00000478313.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCCCATTTCACTTAT	45	False	NA	NA	False	AATAAA	-17	NA	36542855	36526279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36526528_36542564
transcript_90619.known	chr21	+	2005	4	FSM	ENSG00000183145.9	ENST00000485272.5	2005	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	33.7934904974316	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTGATAATCACCCT	NA	False	NA	14	True	AATAAA	-11	NA	37006149	37019659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_37006234_37008156_37008224_37013550_37013619_37017873
transcript_9062.nnic	chr1	+	1819	15	NNC	ENSG00000188092.15	novel	1954	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	78.1652161796292	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147928387	147993339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710_147992949_147993068
transcript_90625.known	chr21	-	972	6	FSM	ENSG00000185808.14	ENST00000399098.5	972	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	70.7926549862343	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	128	False	NA	-4	True	AATAAA	-21	NA	37073170	37065373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072999
transcript_90637.known	chr21	-	688	5	FSM	ENSG00000185808.14	ENST00000399102.5	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	71.7160198282085	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	398	False	NA	-4	True	AATAAA	-21	NA	37072900	37065373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072847
transcript_90638.known	chr21	-	656	5	FSM	ENSG00000185808.14	ENST00000399103.5	656	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	78.4314987744082	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-4	True	NA	-4	True	AATAAA	-21	NA	37073011	37065373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072990
transcript_90640.nnic	chr21	-	739	5	NNC	ENSG00000185808.14	novel	972	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	78.8301179753018	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	98	False	NA	-4	True	AATAAA	-21	NA	37073200	37065373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37073096
transcript_9065.nnic	chr1	+	1974	15	NNC	ENSG00000188092.15	novel	1954	14	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	96.9461243186553	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147928395	147993339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_147928579_147932598_147932642_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_9066.known	chr1	+	1954	14	FSM	ENSG00000188092.15	ENST00000488165.5	1954	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	74.830222037473	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147928392	147993339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943976_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_90663.known	chr21	-	562	3	FSM	ENSG00000185808.14	ENST00000329667.7	562	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	101	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	17	True	NA	-4	True	AATAAA	-21	NA	37072537	37065373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37065713_37067261_37067381_37072433
transcript_90665.known	chr21	+	2025	18	FSM	ENSG00000182670.13	ENST00000540756.5	2025	18	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	57.886059183113	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAGGTCTCTGAGTCA	13	True	NA	10	True	AATAAA	-17	NA	37073280	37153323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_37073365_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379_37135515_37138633_37138715_37140560_37140674_37144524_37144646_37147480_37147604_37148545_37148648_37150077_37150171_37150819_37150885_37151892_37152030_37152950
transcript_90668.known	chr21	+	842	9	FSM	ENSG00000182670.13	ENST00000463216.5	842	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	103.45824942942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATGGCCTTATTGGAGC	9	True	NA	NA	False	AATATA	-33	NA	37073276	37135426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_37073474_37108391_37108447_37121816_37121980_37122982_37123029_37124618_37124743_37126079_37126144_37129002_37129064_37132681_37132767_37135379
transcript_90669.known	chr21	-	988	7	FSM	ENSG00000157538.14	ENST00000398998.1	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	146.376986655083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGGAGGGAAGCATAG	-10	True	NA	NA	False	NA	NA	NA	37267532	37225543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37267237
transcript_90673.known	chr21	-	821	5	FSM	ENSG00000157538.14	ENST00000399001.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	161.258139329461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTCACAGAAAACATTG	-18	True	NA	-26	True	NA	NA	NA	37267351	37225298	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37267237
transcript_90677.known	chr21	-	959	2	FSM	ENSG00000157538.14	ENST00000498789.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTATTCCTGGGCCTG	-7	True	NA	-15	True	ATTAAA	-18	NA	37267340	37261081	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37261938_37267237
transcript_90678.known	chr21	-	3056	8	FSM	ENSG00000157538.14	ENST00000309117.11	3056	8	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_4	35.7947664627449	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGCTTTCCTTAGAG	-1	True	NA	NA	False	AATAAA	-20	NA	37267334	37223421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_90679.known	chr21	-	4398	10	FSM	ENSG00000157538.14	ENST00000399000.7	4398	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	205.437623827649	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGCTTTCCTTAGAGAA	NA	False	NA	NA	False	AATAAA	-22	NA	37267919	37223419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37229144_37229223_37231492_37231976_37232376_37232646_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_90682.known	chr21	-	19659	4	FSM	ENSG00000157542.11	ENST00000609713.2	19659	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.29983164553722	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTTTCTTTTTTATGT	-6	True	NA	NA	False	AATAAA	-18	NA	37916457	37607372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37625485_37714210_37715132_37840657_37840710_37915883
transcript_90691.known	chr21	+	437	3	FSM	ENSG00000198054.12	ENST00000469658.5	437	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACAAACATCTTTCCTG	0	True	NA	NA	False	AATAAA	-19	NA	38121472	38156511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_38121602_38122311_38122412_38156303
transcript_90692.known	chr21	-	1454	8	FSM	ENSG00000157554.20	ENST00000468474.5	1454	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.43276948084663	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATCTATCAAGTGCCC	266	False	NA	NA	False	AATAAA	-24	NA	38661694	38400071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_38400646_38402556_38402638_38403505_38403710_38423409_38423562_38445403_38445622_38575661_38575748_38584843_38584946_38661657
transcript_90693.known	chr21	-	838	2	FSM	ENSG00000205622.12	ENST00000440379.2	838	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGGTGCACAGTTCAG	NA	False	NA	NA	False	CATAAA	-18	NA	38915148	38912737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_38913418_38914990
transcript_90694.nic	chr21	+	1723	4	ISM	ENSG00000157557.13	ENST00000662305.1	2351	10	9032	-18	8799	18	3prime_fragment	FALSE	canonical	3	230	junction_1	11.0855260988773	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATATGTTTTCCACTTC	6739	False	NA	29	True	AGTAAA	-30	NA	38818434	38823801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_38818647_38819502_38819767_38821585_38821705_38822673
transcript_90698.known	chr21	-	760	6	FSM	ENSG00000183527.12	ENST00000431628.1	760	6	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_5	328.815814704828	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	1	True	NA	NA	False	AAGAAA	-43	NA	39183385	39175589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39183251
transcript_9070.known	chr1	+	2633	14	FSM	ENSG00000188092.15	ENST00000478307.5	2633	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	81.1061835975006	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTCAGTTATGTCATT	NA	False	NA	3	True	AATAGA	-14	NA	147928392	147993521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968357_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_90702.known	chr21	-	1754	7	FSM	ENSG00000183527.12	ENST00000331573.8	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_3	75.6651982236366	2341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCACAAACTGAACTGCA	-21	True	NA	NA	False	NA	NA	NA	39183451	39174768	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
transcript_90707.known	chr21	+	1028	1	FSM	ENSG00000255568.3	ENST00000603064.2	1028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGTGTACAAGTTGGCT	32	False	NA	NA	False	AATGAA	-24	NA	39313934	39314962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39313900_39315000
transcript_90709.known	chr21	-	850	7	FSM	ENSG00000205581.11	ENST00000419378.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	2335.0510106253	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATGGCAATATGGAGTC	0	True	NA	-49	True	AATACA	-8	NA	39349040	39342787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39343160_39345145_39345275_39347378_39347479_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_9071.known	chr1	+	2160	14	FSM	ENSG00000188092.15	ENST00000314163.12	2160	14	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	40.9116525406817	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTTCCTTTTTTTTT	-1	True	NA	74	True	NA	NA	NA	147928419	147993592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_90710.known	chr21	-	1045	7	FSM	ENSG00000205581.11	ENST00000436324.5	1045	7	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_3	2312.40743358278	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTAACATCTTTGTGG	-1	True	NA	93	True	AAGAAA	-42	NA	39349088	39342645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39343160_39345145_39345275_39347378_39347484_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_90716.known	chr21	-	1271	6	FSM	ENSG00000205581.11	ENST00000380749.10	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	4780	junction_5	464.507653327693	4978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-1	True	NA	-2	True	AATAAA	-19	NA	39349088	39342314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_90718.known	chr21	-	709	6	FSM	ENSG00000205581.11	ENST00000380747.5	709	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2181.08912243402	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTATGGGAGGCTCTG	NA	False	NA	-140	True	NA	NA	NA	39349647	39342878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39349459
transcript_90721.known	chr21	-	745	7	FSM	ENSG00000205581.11	ENST00000485550.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	2575.40051362027	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGTACAACCAGAAAATA	-1	True	NA	NA	False	NA	NA	NA	39348597	39342908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39343160_39345145_39345275_39345829_39345959_39347378_39347484_39348291_39348340_39348421_39348452_39348544
transcript_90722.known	chr21	+	1328	9	FSM	ENSG00000285815.1	ENST00000647779.1	1328	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	136.757026784732	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	-6	True	NA	20	True	AATAAA	-17	NA	39380331	39515506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_90726.nnic	chr21	+	1270	4	NIC	ENSG00000182093.16	novel	1534	5	NA	NA	-40	-43	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	189.415475139235	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTGTGTGGCCTACAAA	NA	False	NA	13	True	AAAACA	-32	NA	39380285	39397700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_39380487_39390697_39390864_39391768_39391837_39396865
transcript_90727.nnic	chr21	+	1162	4	NIC	ENSG00000182093.16	novel	1464	5	NA	NA	-2	-43	combination_of_known_splicesites	FALSE	canonical	3	10	junction_3	191.475556896667	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTGTGTGGCCTACAAA	-17	True	NA	13	True	AAAACA	-32	NA	39387762	39397700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_39387856_39390697_39390864_39391768_39391837_39396865
transcript_90731.known	chr21	-	2533	11	FSM	ENSG00000157578.14	ENST00000288350.8	2533	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.9560080889705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAGTAAAAAATCTATTTT	-18	True	NA	NA	False	ATTAAA	-19	NA	39445778	39405727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39406613_39409978_39410097_39410263_39410368_39411717_39411803_39420705_39420844_39422975_39423491_39428171_39428504_39429130_39429212_39435419_39435574_39444134_39444202_39445724
transcript_90733.known	chr21	+	1534	5	FSM	ENSG00000182093.16	ENST00000649170.1	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	97.8554418517437	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	-12	True	NA	16	True	AGTAAA	-18	NA	39380325	39397889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_90736.known	chr21	+	1437	5	FSM	ENSG00000182093.16	ENST00000649822.1	1437	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	211.165071685636	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGCAAGTTCATATT	5	True	NA	15	True	AGTAAA	-17	NA	39380477	39397888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380487_39390697_39390920_39391768_39391837_39393165_39393281_39396865
transcript_90739.known	chr21	+	699	5	FSM	ENSG00000182093.16	ENST00000398753.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	214.337350921392	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGTCATTGAGCCAAG	-15	True	NA	NA	False	NA	NA	NA	39380457	39397116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380557_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_90745.known	chr21	+	1464	5	FSM	ENSG00000182093.16	ENST00000380708.5	1464	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	143.678460459458	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	-15	True	NA	16	True	AGTAAA	-18	NA	39387764	39397889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39387856_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_90747.known	chr21	+	1416	5	FSM	ENSG00000182093.16	ENST00000466787.1	1416	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	215.880030340928	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATATTGCCAACTGGAAA	11	True	NA	NA	False	NA	NA	NA	39387790	39397254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39387856_39390697_39391477_39391768_39391837_39393165_39393281_39396865
transcript_90758.known	chr21	+	2093	4	FSM	ENSG00000182093.16	ENST00000648495.1	2093	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCTAATAAAAGAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	39412417	39428500	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39414005_39425759_39426035_39426798_39426853_39428323
transcript_90759.known	chr21	-	1308	4	FSM	ENSG00000157578.14	ENST00000491625.5	1308	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGATTGATTTTCCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	39445805	39422411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39423491_39429130_39429212_39444134_39444202_39445724
transcript_90764.known	chr21	+	321	2	FSM	ENSG00000182093.16	ENST00000480690.1	321	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGTATTTTTGAATTTA	NA	False	NA	NA	False	AATAAA	-18	NA	39425918	39428528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39426035_39428323
transcript_90765.known	chr21	+	780	7	FSM	ENSG00000185437.15	ENST00000380631.5	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	37.4477413649119	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTACATGGAGGTATCT	102	False	NA	NA	False	NA	NA	NA	39445941	39515207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39446082_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_90766.known	chr21	+	816	7	FSM	ENSG00000185437.15	ENST00000380634.5	816	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	39.2743201369829	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAATGATTTCAAGG	25	False	NA	NA	False	NA	NA	NA	39445864	39515355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39445893_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_90767.known	chr21	+	1014	7	FSM	ENSG00000185437.15	ENST00000380637.7	1014	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	38.1779459315919	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	15	True	NA	20	True	AATAAA	-17	NA	39445854	39515506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39445930_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_90773.known	chr21	+	1109	7	FSM	ENSG00000185437.15	ENST00000333634.10	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	13.6341075574784	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	0	True	NA	18	True	AATAAA	-15	NA	39451969	39515504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_90774.known	chr21	-	3846	4	FSM	ENSG00000184809.13	ENST00000670049.1	3846	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	80.0291613517639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGAGGCCTCTCCA	10	True	NA	NA	False	NA	NA	NA	39612857	39597202	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39600280_39601418_39601544_39609582_39609666_39612296
transcript_90777.known	chr21	-	3106	3	FSM	ENSG00000184809.13	ENST00000329618.7	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	87.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTATTATTAAAGTTCT	-9	True	NA	-40	True	NA	NA	NA	39612876	39604133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39606577_39609582_39609666_39612296
transcript_90778.known	chr21	-	1071	3	FSM	ENSG00000184809.13	ENST00000380612.8	1071	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	84.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	826	False	NA	NA	False	ATTAAA	-18	NA	39612441	39597146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39597990_39609582_39609666_39612296
transcript_90779.nic	chr21	-	2000	3	ISM	ENSG00000184809.13	ENST00000489821.5	1919	4	-449	1719	16	-1705	5prime_fragment	FALSE	canonical	3	20	junction_1	84.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCATGTTTTCTTCGCTTT	426	False	NA	0	True	AATAAA	-23	NA	39612841	39598907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_39600280_39609582_39609666_39612296
transcript_90781.known	chr21	-	1823	3	FSM	ENSG00000184809.13	ENST00000380604.8	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	84	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGCGCGGT	763	False	NA	NA	False	AATACA	-1	NA	39612504	39604470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39606003_39609582_39609666_39612296
transcript_90782.known	chr21	-	4202	3	FSM	ENSG00000184809.13	ENST00000661806.1	4202	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	51.5	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	357	False	NA	NA	False	NA	NA	NA	39612910	39602842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39606348_39609582_39609666_39612296
transcript_90791.known	chr21	+	534	3	FSM	ENSG00000183036.11	ENST00000328619.10	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGACTGCCTTTCTT	6	True	NA	8	True	AATAAA	-21	NA	39867437	39929392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39867511_39898475_39898528_39928983
transcript_90793.known	chr21	+	1013	6	FSM	ENSG00000182240.16	ENST00000463674.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	4.28952211790544	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCAGGCCTGACCTCAA	-1	True	NA	NA	False	NA	NA	NA	41241744	41275624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41257157_41257327_41275370
transcript_90795.known	chr21	+	2824	8	FSM	ENSG00000182240.16	ENST00000328735.10	2824	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	14.8117438238055	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTAGCTTAGTTGTCT	19	False	NA	21	True	AATAAA	-30	NA	41167800	41276597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_41168576_41226265_41226355_41237512_41237730_41241818_41241948_41243375_41243511_41245961_41246064_41250751_41250902_41275370
transcript_90796.known	chr21	+	1317	8	FSM	ENSG00000183844.17	ENST00000357985.7	1317	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.26778683805536	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCACGTCTGGCACCGG	0	True	NA	NA	False	NA	NA	NA	41316800	41357727	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_41316899_41322922_41323067_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_90799.known	chr21	+	864	7	FSM	ENSG00000183844.17	ENST00000398647.7	864	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.40947204913349	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATGATGTGATTCAAGC	13	True	NA	94	True	ACTAAA	-20	NA	41316813	41357431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_41316899_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_908.nic	chr1	-	901	5	ISM	ENSG00000008128.23	ENST00000357760.6	2446	20	-367	13469	-334	0	5prime_fragment	FALSE	canonical	3	24	junction_1	27.8691137282835	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGAGTGGGCTGGGTC	NA	False	NA	NA	False	NA	NA	NA	1724691	1716349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_90802.known	chr21	+	3113	10	FSM	ENSG00000183486.14	ENST00000680539.1	3113	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	1.87247772737252	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTGTATGTTTCAA	4341	False	NA	NA	False	NA	NA	NA	41381963	41409329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_41382565_41390564_41390704_41395586_41395786_41397612_41397692_41398896_41399020_41399195_41399338_41401969_41402129_41403266_41403344_41406743_41406999_41407990
transcript_90805.known	chr21	-	3945	14	FSM	ENSG00000184012.14	ENST00000679054.1	3945	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	37.6195530174239	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	3953	False	NA	NA	False	AATAAA	-24	NA	41508146	41464304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41507573
transcript_90806.known	chr21	-	3446	14	FSM	ENSG00000184012.14	ENST00000678171.1	3446	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	40.4025601157318	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-2	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41466150_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_90807.known	chr21	-	3326	14	FSM	ENSG00000184012.14	ENST00000678959.1	3326	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	40.1026788640236	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-2	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494479_41494579_41498118_41498190_41508080
transcript_90809.known	chr21	-	1427	13	FSM	ENSG00000184012.14	ENST00000424093.6	1427	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	38.5856730752059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACATGGTCTTCGTCCTT	3	True	NA	NA	False	AAGAAA	-45	NA	41508092	41466141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_90815.nnic	chr21	-	2484	8	NNC	ENSG00000184012.14	novel	3240	14	NA	NA	-9177	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	45.9889072694355	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTGCATCTTTGAAGT	NA	False	NA	0	True	AATAAA	-24	NA	41478014	41464552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41477915
transcript_90816.nnic	chr21	-	1028	8	NNC	ENSG00000184012.14	novel	1877	14	NA	NA	-9177	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_7	45.9889072694355	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCACTCTCTGCCATTC	NA	False	NA	-6	True	ATTAAA	-18	NA	41478014	41466008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41477915
transcript_90819.nnic	chr21	-	824	6	NNC	ENSG00000184012.14	novel	217	4	NA	NA	0	6330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.5797817981957	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGTCTCCTGGACAAT	-2	True	NA	NA	False	AATAAA	-31	NA	41508158	41482158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_41482404_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_90827.nnic	chr21	-	1411	5	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	-585	59	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	44.4992977472679	86	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714640	41711460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_41712045_41712815_41713001_41713550_41713673_41714019_41714133_41714233
transcript_90828.nnic	chr21	-	1670	5	NNC	ENSG00000236384.7	novel	718	7	NA	NA	-580	59	intron_retention	FALSE	canonical	3	39	junction_1	38.0197317192008	97	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714635	41711460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_41712045_41712815_41713001_41713550_41713937_41714019_41714133_41714233
transcript_90835.nic	chr21	-	1699	5	NIC	ENSG00000236384.7	novel	2033	6	NA	NA	-544	59	combination_of_known_junctions	FALSE	canonical	3	15	junction_3	44.1163235095582	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714599	41711460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_41712374_41712815_41713001_41713550_41713673_41714019_41714133_41714233
transcript_90837.nnic	chr21	-	1724	4	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	-551	59	intron_retention	FALSE	canonical	3	39	junction_1	40.3347107202827	87	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714606	41711460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_41712045_41712815_41713001_41713550_41714133_41714233
transcript_90838.nnic	chr21	-	1619	4	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	783	59	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_1	41.3628926562068	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714970	41711460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_41712045_41712815_41713001_41714019_41714133_41714233
transcript_90839.nnic	chr21	-	1715	4	NNC	ENSG00000236384.7	novel	2033	6	NA	NA	783	59	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	48.2861838992849	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714970	41711460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_41712141_41712815_41713001_41714019_41714133_41714233
transcript_90841.nnic	chr21	-	1948	4	NIC	ENSG00000236384.7	novel	560	4	NA	NA	783	59	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	40.4749579644281	95	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATAGATGTATTTCATGT	NA	False	NA	-11	True	AATAAA	-21	NA	41714970	41711460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_41712374_41712815_41713001_41714019_41714133_41714233
transcript_90843.nic	chr21	-	1454	2	NIC	ENSG00000236384.7	novel	718	7	NA	NA	-583	-228	intron_retention	FALSE	canonical	3	134	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAGACAAAAAATTGAAA	NA	False	NA	NA	False	NA	NA	NA	41714638	41713083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_41714133_41714233
transcript_90848.known	chr21	-	761	6	FSM	ENSG00000157617.17	ENST00000490479.1	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	10.373041983912	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAAAGGCAGCTCTTAG	NA	False	NA	NA	False	NA	NA	NA	41942160	41912159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41912441_41914597_41914722_41918104_41918228_41918855_41918961_41921971_41922086_41942146
transcript_9085.nic	chr1	+	1874	13	NIC	ENSG00000188092.15	novel	1954	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	76.0717406283189	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147928392	147993339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_147928579_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_90850.known	chr21	-	356	2	FSM	ENSG00000157617.17	ENST00000478372.1	356	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTATCTCCAAAGAC	493	False	NA	NA	False	NA	NA	NA	41953519	41952945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41953152_41953369
transcript_90851.known	chr21	-	7452	3	FSM	ENSG00000173276.14	ENST00000310826.10	7452	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTCAATGGTATGCC	-7	True	NA	-9	True	AATAAA	-23	NA	42010360	41986830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41994109_42002896_42002962_42010251
transcript_90852.known	chr21	-	5608	2	FSM	ENSG00000173276.14	ENST00000398511.3	5608	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATAATGCCGTTCTGGTT	NA	False	NA	-5	True	AATAAA	-18	NA	42010387	41988636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41994109_42010251
transcript_90853.known	chr21	+	588	2	FSM	ENSG00000237232.9	ENST00000675770.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGCCAAATTAACAGC	NA	False	NA	-8	True	ATTAAA	-3	NA	42009358	42011582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42009585_42011220
transcript_90854.known	chr21	+	952	2	FSM	ENSG00000237232.9	ENST00000412906.5	952	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCAATGTCATGTGGATA	NA	False	NA	NA	False	ATTAAA	-21	NA	42009193	42024866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42009585_42024305
transcript_90856.known	chr21	-	867	3	FSM	ENSG00000160180.17	ENST00000518498.3	867	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGTATTTGTTTGCT	-1	True	NA	NA	False	AGTAAA	-20	NA	42315409	42311666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42312270_42313484_42313632_42315292
transcript_90857.known	chr21	-	419	2	FSM	ENSG00000160180.17	ENST00000489676.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTGAGGTTGTGCTT	-7	True	NA	-5	True	AATAAA	-40	NA	42313686	42312052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42312270_42313484
transcript_90858.known	chr21	-	492	3	FSM	ENSG00000160182.3	ENST00000291527.3	492	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0.5	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCTGTTCATTCTTTT	-2	True	NA	-1	True	ATTAAA	-16	NA	42366535	42362281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42362496_42363254_42363408_42366410
transcript_90859.known	chr21	-	1342	9	FSM	ENSG00000160183.17	ENST00000398397.3	1342	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.707106781186548	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGGTATGACAAGTGA	903	False	NA	NA	False	ATTAAA	-16	NA	42396091	42381875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42382235_42383032_42383199_42383969_42384014_42385408_42385535_42388402_42388527_42388928_42389046_42389926_42390038_42395323_42395469_42395941
transcript_9086.nnic	chr1	+	1526	11	NNC	ENSG00000188092.15	novel	1954	14	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	86.7054784889629	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	NA	False	NA	NA	False	ATTAAA	-15	NA	147928387	147993339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_147928579_147936626_147936687_147938713_147938735_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_90860.nic	chr21	+	2928	20	NIC	ENSG00000160190.14	novel	481	5	NA	NA	330	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_5	48.8696610108257	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAGAACACTCAGAGAAT	-11	True	NA	6	True	AATAAA	-19	NA	42514853	42581426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_42514936_42518276_42518511_42525775_42525858_42534697_42534831_42535471_42535551_42539511_42539648_42542403_42542481_42543435_42543603_42547102_42547141_42554061_42554143_42558957_42559090_42562077_42562169_42563814_42563878_42564707_42564794_42565826_42565876_42566984_42567059_42568359_42568439_42574817_42574916_42579735_42579801_42580344
transcript_90861.known	chr21	-	1300	9	FSM	ENSG00000160188.10	ENST00000291536.8	1300	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.84032319311183	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTGCTTCAAGTTCT	3	True	NA	3	True	AATAAA	-28	NA	42496224	42472485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42472871_42475897_42476048_42477290_42477445_42482636_42482709_42485668_42485805_42486370_42486462_42492757_42492864_42492965_42493080_42496132
transcript_90862.known	chr21	-	937	8	FSM	ENSG00000160188.10	ENST00000398352.3	937	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	5.42481072744215	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGGCAGTTGCAGTG	1063	False	NA	NA	False	NA	NA	NA	42496186	42472696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42472871_42475897_42476048_42477290_42477445_42482636_42482709_42485668_42485805_42486370_42486462_42492757_42492864_42496132
transcript_90865.nnic	chr21	-	854	4	NIC	ENSG00000160188.10	novel	2880	8	NA	NA	-51	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	7.78888096369861	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTGCTTCAAGTTCT	952	False	NA	3	True	AATAAA	-28	NA	42496297	42472485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_42472871_42475897_42476048_42477290_42477445_42496132
transcript_90868.known	chr21	+	449	3	FSM	ENSG00000239930.2	ENST00000416179.1	449	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGAGATTCCAAAATTATG	NA	False	NA	NA	False	AATAAA	-20	NA	42496538	42497443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42496666_42496822_42496934_42497232
transcript_90872.known	chr21	+	1603	2	FSM	ENSG00000160190.14	ENST00000454800.1	1603	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTTATGACTCGTGTT	NA	False	NA	NA	False	AATAAA	-22	NA	42496007	42498203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42496230_42496822
transcript_90873.nic	chr21	+	589	2	NIC	ENSG00000239930.2	novel	449	3	NA	NA	17	0	intron_retention	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGAGATTCCAAAATTATG	NA	False	NA	NA	False	AATAAA	-20	NA	42496555	42497443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_42496934_42497232
transcript_90874.known	chr21	+	617	4	FSM	ENSG00000160190.14	ENST00000471277.5	617	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	84.8528137423857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTTATACTTTCAG	22	True	NA	NA	False	ATTAAA	-15	NA	42513891	42526038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42513925_42514630_42514718_42518276_42518511_42525775
transcript_90877.known	chr21	+	2192	20	FSM	ENSG00000160191.18	ENST00000291539.11	2192	20	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_4	46.9269485919884	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	11	True	NA	21	True	AATATA	-15	NA	42653620	42775509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_90880.known	chr21	+	1883	19	FSM	ENSG00000160191.18	ENST00000335512.8	1883	19	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	46.3276042287991	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	140	False	NA	21	True	AATATA	-15	NA	42653749	42775509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_90883.known	chr21	+	1885	18	FSM	ENSG00000160191.18	ENST00000398232.7	1885	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	65.6687187543458	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_90884.known	chr21	+	1783	18	FSM	ENSG00000160191.18	ENST00000398234.7	1783	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	72.3980251694955	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	-1	True	NA	21	True	AATATA	-15	NA	42653778	42775509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_90885.known	chr21	+	1671	17	FSM	ENSG00000160191.18	ENST00000398224.3	1671	17	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	66.5708914898246	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	1	True	NA	21	True	AATATA	-15	NA	42653812	42775509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_90887.nic	chr21	+	838	9	ISM	ENSG00000160191.18	ENST00000335512.8	1883	19	-10	21312	-9	133	5prime_fragment	FALSE	canonical	3	97	junction_4	49.658206773906	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACTTGTTTTGCCAGGT	130	False	NA	NA	False	TTTAAA	-17	NA	42653739	42754197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989
transcript_90890.nic	chr21	+	909	6	NIC	ENSG00000160191.18	novel	794	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	96.7293130338472	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	130	False	NA	9	True	AATAAA	-11	NA	42653739	42701189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_42653884_42686191_42686263_42687916_42687995_42697414_42697491_42698967_42699012_42700693
transcript_90893.nnic	chr21	+	903	5	NNC	ENSG00000160191.18	novel	794	5	NA	NA	-9	4	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_4	81.3111308493493	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTATTTCATGTATTTAA	130	False	NA	13	True	AATAAA	-15	NA	42653739	42701193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700627
transcript_90894.known	chr21	+	794	5	FSM	ENSG00000160191.18	ENST00000486902.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	81.7324140105992	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	-1	True	NA	9	True	AATAAA	-11	NA	42653778	42701189	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700693
transcript_90899.nnic	chr21	+	597	3	NNC	ENSG00000160191.18	novel	431	5	NA	NA	-9	-12201	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	119	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTGGGTTTTTTCCTCT	130	False	NA	NA	False	AATAAA	-16	NA	42653739	42686837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_42653884_42686191_42686263_42686455
transcript_90905.known	chr21	+	431	5	FSM	ENSG00000160191.18	ENST00000472401.5	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	99.4041623876988	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAGGAAAAAGAAAT	139	False	NA	NA	False	TTTAAA	-2	NA	42653748	42699038	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42697414_42697491_42698967
transcript_90917.known	chr21	-	1471	12	FSM	ENSG00000160193.12	ENST00000330317.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	42.7274661504326	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	13	True	NA	-28	True	AGTAAA	-15	NA	42879531	42843093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_90918.known	chr21	-	2106	11	FSM	ENSG00000160193.12	ENST00000398208.3	2106	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	37.9204430353866	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	5	True	NA	-2	True	AATATA	-14	NA	42879539	42849225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_90923.nnic	chr21	+	347	2	NNC	ENSG00000160194.18	novel	2029	6	NA	NA	-49	-20106	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	123	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATATGTGGTAATGTGT	459	False	NA	9	True	AATAAA	-20	NA	42879594	42883825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_42879722_42883605
transcript_90924.nnic	chr21	+	357	2	NNC	ENSG00000160194.18	novel	2029	6	NA	NA	-25	-20106	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATATGTGGTAATGTGT	483	False	NA	9	True	AATAAA	-20	NA	42879618	42883825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_42879756_42883605
transcript_90926.known	chr21	+	2029	6	FSM	ENSG00000160194.18	ENST00000460259.1	2029	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.4905397342646	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTGTGCATAATCGGTT	508	False	NA	21	True	AATAAA	-22	NA	42879643	42909105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42879866_42883605_42883796_42886800_42886960_42896926_42897048_42903181_42904277_42908863
transcript_90927.known	chr21	-	2790	2	FSM	ENSG00000233056.4	ENST00000447535.2	2774	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	143	junction_1	0	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTCATGTTGTCTGT	170	False	NA	-9	True	ATTAAA	-17	NA	42925646	42916802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42919292_42925345
transcript_90933.known	chr21	+	1725	6	FSM	ENSG00000160199.15	ENST00000480179.1	1725	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	44.231210700138	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	22	False	NA	NA	False	NA	NA	NA	42974661	43018051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907
transcript_90952.nic	chr21	-	2320	18	NIC	ENSG00000160200.18	novel	2353	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	803	junction_1	485.433676902706	6095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-1	True	NA	NA	False	TATAAA	-14	NA	43075874	43053190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_90970.known	chr21	-	2453	17	FSM	ENSG00000160200.18	ENST00000398158.5	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_16	624.83389980358	7351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-5	True	NA	NA	False	TATAAA	-14	NA	43075831	43053190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073304_43075769
transcript_90972.known	chr21	-	2495	17	FSM	ENSG00000160200.18	ENST00000398165.8	2495	17	0	0	0	0	multi-exon	FALSE	canonical	3	1604	junction_10	325.332137975946	7835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-9	True	NA	NA	False	TATAAA	-14	NA	43075835	43053190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_90990.known	chr21	-	1515	6	FSM	ENSG00000160200.18	ENST00000491776.1	1515	6	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	962.445343902707	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCATCACAACAGCCCT	5142	False	NA	NA	False	ATTAAA	-2	NA	43060520	43055071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43056100_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440
transcript_90991.known	chr21	-	828	7	FSM	ENSG00000160200.18	ENST00000430013.1	828	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1168.8125978483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGCTGATCTCATCTGT	5116	False	NA	NA	False	NA	NA	NA	43060546	43055597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43055871_43056057_43056100_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440
transcript_90992.known	chr21	-	683	4	FSM	ENSG00000160200.18	ENST00000465732.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_3	253.415776058941	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGTGACCAAAGTGACT	9	True	NA	NA	False	AAAACA	-20	NA	43075864	43068320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43068616_43071984_43072202_43073265_43073342_43075769
transcript_9102.nic	chr1	+	451	3	ISM	ENSG00000188092.15	ENST00000488165.5	1954	14	-5	54426	-5	-27732	5prime_fragment	FALSE	canonical	3	155	junction_1	30.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTGTTAATAGTTCAGT	NA	False	NA	NA	False	NA	NA	NA	147928387	147938913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_147928579_147936626_147936687_147938713
transcript_91026.known	chr21	-	945	8	FSM	ENSG00000160201.12	ENST00000291552.9	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	4090	junction_6	882.814469611312	43254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	24	False	43107594	NA	False	AATAAA	-20	NA	43107570	43092955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314_43104403_43107450
transcript_91027.known	chr21	-	940	8	FSM	ENSG00000160201.12	ENST00000380276.6	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	2282	junction_5	1691.04056843165	41602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-21	True	NA	NA	False	AATAAA	-20	NA	43107565	43092955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43101365_43101433_43104314_43104403_43107450
transcript_91028.known	chr21	-	966	9	FSM	ENSG00000160201.12	ENST00000464750.5	966	9	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_6	2061.585126638	29294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	20	True	NA	NA	False	AATAAA	-20	NA	43107524	43092955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43101365_43101433_43104314_43104403_43107450
transcript_91029.known	chr21	-	3973	3	FSM	ENSG00000160201.12	ENST00000496462.1	3973	3	0	0	0	0	multi-exon	FALSE	canonical	3	2622	junction_1	1717	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAAAGAGTTTTGAGCA	20	True	NA	NA	False	NA	NA	NA	43107524	43097621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43101433_43104314_43104403_43107450
transcript_9103.known	chr1	+	750	7	FSM	ENSG00000188092.15	ENST00000468618.6	750	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	100.148916896567	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATCAGGAAGTGAAAGT	15	False	NA	NA	False	GATAAA	-15	NA	147928435	147966645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147928579_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553
transcript_91032.known	chr21	-	1900	9	FSM	ENSG00000160207.9	ENST00000291560.7	1900	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	2.39791576165636	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGCTGTCTAAAATCTA	1	True	NA	NA	False	AATAAA	-26	NA	43659488	43529185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43529963_43592224_43592329_43613829_43613948_43630321_43630455_43633271_43633422_43644288_43644393_43656586_43656738_43658060_43658321_43659385
transcript_91033.nic	chr21	-	752	4	ISM	ENSG00000160207.9	ENST00000443485.1	989	7	-24	30310	-6	-30310	5prime_fragment	FALSE	canonical	3	4	junction_2	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTGAGTGGGTTGGA	-5	True	NA	NA	False	AATAAA	-18	NA	43659494	43644160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_43644393_43656586_43656738_43658060_43658321_43659385
transcript_91035.known	chr21	+	5078	16	FSM	ENSG00000160208.13	ENST00000340648.6	5078	16	0	0	0	0	multi-exon	TRUE	canonical	3	373	junction_9	38.4757354994316	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGATGTTGACTT	10	True	NA	34	True	ATTAAA	-23	NA	43659559	43696079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_43659795_43669883_43669967_43672307_43672366_43673869_43673956_43674635_43674698_43675033_43675164_43676271_43676337_43676732_43676915_43683278_43683374_43684552_43684651_43685769_43685790_43686803_43686936_43687515_43688241_43690287_43690441_43691438_43691503_43693189
transcript_91043.known	chr21	+	7341	11	FSM	ENSG00000160209.19	ENST00000291565.9	7341	11	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_8	54.8343870212844	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTGAGGCATGATGGTT	-3	True	NA	10	True	AATAAA	-16	NA	43719128	43762299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_43719382_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_91046.nic	chr21	+	1079	11	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	176.675861395947	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATGACCGAAACTTGA	-18	True	NA	-62	True	AAAACA	-17	NA	43728864	43756144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_43729011_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_91047.nic	chr21	+	1337	11	NIC	ENSG00000160209.19	novel	888	9	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_1	176.675861395947	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGTGATCTGAAAAC	9264	False	NA	25	True	NA	NA	NA	43728717	43756255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_43729011_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_91048.nic	chr21	+	923	10	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	144.041489221974	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCATGACCGAAACTTGA	-7	True	NA	-62	True	AAAACA	-17	NA	43740995	43756144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_43741041_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_91049.nic	chr21	+	1144	10	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-130	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_1	144.041489221974	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGTGATCTGAAAAC	NA	False	NA	25	True	NA	NA	NA	43740885	43756255	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_43741041_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_91056.known	chr21	-	1855	2	FSM	ENSG00000160213.9	ENST00000639959.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGTCTGGTTTAAATA	348	False	NA	-6	True	AATAAA	-14	NA	43776238	43772510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43774331_43776203
transcript_91057.known	chr21	-	588	3	FSM	ENSG00000160213.9	ENST00000291568.7	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_2	2	26687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCCTCCTTTGTTTT	14	True	NA	-9	True	AATAGA	-20	NA	43776308	43773949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43774331_43774657_43774760_43776203
transcript_91058.known	chr21	-	1258	3	FSM	ENSG00000160213.9	ENST00000675996.1	1258	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	789.5	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCACGCACTTTATGC	-8	True	NA	20	True	AGTAAA	-37	NA	43776330	43773665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43774331_43774657_43774760_43775839
transcript_9106.known	chr1	+	1148	6	FSM	ENSG00000274372.5	ENST00000665117.1	1148	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.16619037896906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACCTTTGGTATCTTT	NA	False	NA	1	True	AATAAA	-17	NA	148013202	148025928	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148013554_148016160_148016259_148019936_148020209_148021913_148021999_148024529_148024720_148025776
transcript_91063.known	chr21	+	2958	13	FSM	ENSG00000160214.13	ENST00000497547.2	2958	13	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_12	36.387860460446	920	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGCGTGTCTAACGTAA	22	True	NA	NA	False	NA	NA	NA	43789576	43805293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_43789763_43791349_43791433_43792671_43792730_43793318_43793405_43795188_43795251_43797421_43797552_43797630_43797696_43797906_43798101_43799569_43799650_43800516_43800615_43800861_43800882_43802273_43802388_43803511
transcript_91068.known	chr21	+	6565	10	FSM	ENSG00000160216.21	ENST00000291572.13	6565	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	10.3649456711279	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTCCGAGTTCTCGTTT	4	True	NA	NA	False	ATTAAA	-33	NA	43865222	43987592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_43865346_43903956_43904020_43959633_43959860_43967945_43968116_43969117_43969280_43970652_43970807_43971387_43971491_43978045_43978122_43980988_43981188_43982303
transcript_91072.known	chr21	+	3188	21	FSM	ENSG00000241945.8	ENST00000291576.12	3188	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	106.521875687579	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	7	True	NA	NA	False	ATTAAA	-16	NA	44107398	44131181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44107435_44108983_44109097_44113752_44113848_44114178_44114279_44114624_44114769_44115263_44115400_44115690_44115921_44117819_44117964_44118762_44118834_44119386_44119524_44120347_44120497_44120630_44120779_44120951_44121103_44122176_44122358_44124579_44124728_44126010_44126120_44126899_44126966_44127931_44128151_44128246_44128398_44128551_44128627_44130596
transcript_91075.known	chr21	+	1584	7	FSM	ENSG00000160221.18	ENST00000291577.11	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	241.03227077625	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	7	True	NA	NA	False	AATAAA	-17	NA	44133682	44145711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
transcript_91078.known	chr21	+	1077	6	FSM	ENSG00000160221.18	ENST00000427803.6	1077	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	252.505524692035	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	-7	True	NA	NA	False	ATTAAA	-19	NA	44133617	44141417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44140941
transcript_91079.known	chr21	+	694	6	FSM	ENSG00000160221.18	ENST00000389690.7	694	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	256.037965934742	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	103	False	NA	NA	False	ATTAAA	-19	NA	44133778	44141417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44141163
transcript_91080.known	chr21	+	1506	6	FSM	ENSG00000160221.18	ENST00000348499.9	1506	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	314.332689995807	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTGTTCAGGGT	4	True	NA	NA	False	AATAAA	-29	NA	44133679	44145723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44143204_44143362_44144820
transcript_91081.known	chr21	+	449	1	FSM	ENSG00000275799.1	ENST00000620163.1	449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTGTGGACAGTTCTGA	2967	False	NA	NA	False	AATAAA	-32	NA	44244544	44244993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44244500_44245000
transcript_91082.known	chr21	-	1384	12	FSM	ENSG00000142182.9	ENST00000628202.3	1384	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.497929597731969	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTCTCTTTCCTCTTCG	17	True	NA	NA	False	AAAAAG	-32	NA	44261897	44246338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44246563_44249025_44249112_44250809_44250950_44251622_44251699_44254616_44254706_44256066_44256155_44258522_44258695_44259436_44259550_44259631_44259712_44260794_44260840_44261153_44261267_44261739
transcript_91083.known	chr21	+	2907	22	FSM	ENSG00000141959.17	ENST00000349048.9	2907	22	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_12	61.8302481948499	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCCTGCAGAACTCCT	-17	True	NA	36	True	AATAAA	-37	NA	44300052	44327373	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
transcript_91087.nic	chr21	-	1525	7	NIC	ENSG00000160226.16	novel	1283	7	NA	NA	27	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_6	47.3251166577185	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	7573	False	NA	-25	True	AATAAA	-17	NA	44338757	44329890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44338233
transcript_91088.nnic	chr21	-	1093	7	NNC	ENSG00000160226.16	novel	2221	7	NA	NA	162	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	55.350398974774	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	7708	False	NA	-25	True	AATAAA	-17	NA	44338622	44329890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44338530
transcript_91089.known	chr21	-	1283	7	FSM	ENSG00000160226.16	ENST00000325223.7	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	34.9650619269515	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-11	True	NA	-25	True	AATAAA	-17	NA	44339402	44329890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_9109.known	chr1	+	494	3	FSM	ENSG00000274372.5	ENST00000614663.4	494	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTTGGTATCTTTCTA	NA	False	NA	4	True	AATAAA	-20	NA	148021849	148025931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148021999_148024529_148024720_148025776
transcript_91091.nnic	chr21	-	1108	6	NIC	ENSG00000160226.16	novel	2221	7	NA	NA	119	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	53.8590753726798	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	2	True	NA	-25	True	AATAAA	-17	NA	44339271	44329890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_44330327_44330822_44330920_44331842_44332015_44333032_44333263_44337648_44337668_44339117
transcript_91094.known	chr21	-	4532	6	FSM	ENSG00000160226.16	ENST00000462742.1	4532	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	67.2773364514381	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	7546	False	NA	-25	True	AATAAA	-17	NA	44338784	44329890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44330327_44330462_44332015_44333032_44333263_44334060_44335805_44337648_44337668_44338233
transcript_9110.known	chr1	-	577	4	FSM	ENSG00000215859.9	ENST00000616036.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGGACCCAGCCCCGG	NA	False	NA	NA	False	AATATA	-29	NA	148014956	148009420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148009593_148010136_148010269_148010457_148010620_148014845
transcript_91104.nnic	chr21	-	362	2	NNC	ENSG00000229356.1	novel	784	4	NA	NA	151	3844	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTACTGAGATATAATTCA	NA	False	NA	NA	False	ATTAAA	-21	NA	44455133	44447141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_44447347_44454976
transcript_91106.nic	chr21	-	936	2	NIC	ENSG00000229356.1	novel	784	4	NA	NA	153	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTGGTATGTTAAAAGT	NA	False	NA	-1	True	ATTAAA	-15	NA	44455131	44450988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_44451770_44454976
transcript_91107.known	chr21	+	644	1	FSM	ENSG00000274225.1	ENST00000617205.1	644	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGTTTTTAGTTTTGT	NA	False	NA	NA	False	TTTAAA	-17	NA	44477849	44478493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44477800_44478500
transcript_91108.nnic	chr21	+	1751	3	Fusion	ENSG00000228709.2_ENSG00000235890.2	novel	1856	2	NA	NA	82	-8090	multi-exon	FALSE	canonical	3	7	junction_1	1	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTCTGTGTTTCATAA	-1	True	NA	12	True	ATTAAA	-23	NA	44485567	44507533	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr21_+_44486231_44502594_44502796_44506646
transcript_91109.nnic	chr21	+	1679	2	Fusion	ENSG00000228709.2_ENSG00000235890.2	novel	1856	2	NA	NA	-54	-8097	multi-exon	FALSE	canonical	3	30	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTAAGTACTTTCTGTGT	-21	True	NA	5	True	ATTAAA	-16	NA	44485431	44507526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr21_+_44486231_44506646
transcript_9111.known	chr1	-	164	1	FSM	ENSG00000206585.1	ENST00000383858.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTGTAATGAAAAAAT	-4	True	NA	NA	False	NA	NA	NA	148038916	148038752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148038800_148038900
transcript_91110.known	chr21	+	912	2	FSM	ENSG00000228709.2	ENST00000449713.2	1856	2	91	853	91	-853	multi-exon	FALSE	canonical	3	24	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGTAGAAGAGGGTG	8	False	NA	NA	False	TTTAAA	-16	NA	44485576	44490288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44486231_44490030
transcript_91111.nnic	chr21	+	1519	2	NNC	ENSG00000228709.2	novel	1856	2	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTACGCACTCAGAAAAA	7	True	NA	12	True	AATAAA	-16	NA	44485459	44491141	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_44486231_44490393
transcript_91114.known	chr21	-	933	4	FSM	ENSG00000184787.19	ENST00000497630.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	251.384168157026	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTGGTTCCCTGTGG	3	True	NA	NA	False	NA	NA	NA	44801819	44770930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44801705
transcript_91116.known	chr21	-	762	4	FSM	ENSG00000184787.19	ENST00000462569.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_1	33.4896335536171	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	-1	True	NA	NA	False	TATAAA	-19	NA	44801801	44776833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801705
transcript_91117.known	chr21	-	1512	2	FSM	ENSG00000184787.19	ENST00000490091.1	1512	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGTTTCCCCATC	-8	True	NA	NA	False	AATAAA	-18	NA	44801808	44799989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44801399_44801705
transcript_91118.known	chr21	-	721	7	FSM	ENSG00000184787.19	ENST00000330942.9	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	258.687982369151	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGTACCAAACAAGGCA	4	True	NA	-62	True	NA	NA	NA	44801774	44771294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_91121.known	chr21	-	1740	4	FSM	ENSG00000184900.16	ENST00000332859.11	1740	4	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_3	64.3238334954903	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	8	True	NA	-38	True	AGTAAA	-20	NA	44818062	44805616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44817947
transcript_91122.known	chr21	-	1779	4	FSM	ENSG00000184900.16	ENST00000397898.7	1779	4	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_1	581.719481842886	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	19	True	NA	-38	True	AGTAAA	-20	NA	44818051	44805616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44807041_44808996_44809119_44813975_44814105_44817947
transcript_91123.known	chr21	-	2600	6	FSM	ENSG00000183255.12	ENST00000330938.8	2600	6	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	16.6324983090334	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTAGTATGCTGCG	8	True	NA	-15	True	AATAAA	-16	NA	44873690	44849597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44851628_44855209_44855257_44856192_44856365_44861162_44861272_44865394_44865448_44873501
transcript_91124.known	chr21	-	2807	16	FSM	ENSG00000160255.18	ENST00000652462.1	2807	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.24499443206436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCACTGTGTCCGCTGT	18	True	NA	-4	True	AATAAA	-27	NA	44920899	44885952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44886431_44886735_44886903_44888692_44888896_44889275_44889496_44889977_44890223_44891808_44891997_44893403_44893545_44894970_44895061_44899066_44899163_44900319_44900476_44901491_44901734_44903364_44903536_44906914_44907096_44910283_44910373_44910724_44910786_44920820
transcript_91126.known	chr21	-	422	4	FSM	ENSG00000160255.18	ENST00000397846.7	422	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTTCTGTGTGGA	21	True	NA	NA	False	AATAAA	-16	NA	44920896	44907986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44908183_44910283_44910373_44910724_44910786_44920820
transcript_91127.known	chr21	-	460	1	FSM	ENSG00000273027.1	ENST00000609461.1	460	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGTCATACTCATTCACT	9789	False	NA	NA	False	AATAAA	-13	NA	44930112	44929652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44929700_44930100
transcript_91129.known	chr21	-	1033	4	FSM	ENSG00000183250.13	ENST00000330551.3	1033	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGGGTCAATAGTCACA	56	False	NA	NA	False	AGTAAA	-24	NA	44939845	44934724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44935097_44935626_44935891_44937538_44937683_44939592
transcript_91130.known	chr21	-	2784	3	FSM	ENSG00000183250.13	ENST00000657006.1	2784	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTGAAACTCCTGAAAAT	328	False	NA	NA	False	NA	NA	NA	44939573	44933314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44935097_44935626_44935891_44938835
transcript_91131.known	chr21	-	2348	3	FSM	ENSG00000183250.13	ENST00000660377.2	2403	3	55	0	27	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCTGAAAATCTTGAAAT	-6	True	NA	NA	False	NA	NA	NA	44939886	44933306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44935097_44935626_44935891_44939592
transcript_91134.known	chr21	+	880	6	FSM	ENSG00000160256.13	ENST00000397826.7	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	49.0469163148918	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGCTGGGCACACC	-8	True	NA	5	True	NA	NA	NA	44940011	44976989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_91135.known	chr21	+	892	6	FSM	ENSG00000160256.13	ENST00000291634.11	892	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	61.1031914060141	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	9	True	NA	-11	True	AATAAA	-42	NA	44940028	44976973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_91136.known	chr21	+	443	1	FSM	ENSG00000276529.1	ENST00000616815.1	443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	220	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGTCTGGTTGTGG	NA	False	NA	33	True	AATAAA	-36	NA	44978831	44979274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44978800_44979300
transcript_91139.known	chr21	+	587	4	FSM	ENSG00000197381.17	ENST00000462214.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	6.79869268479038	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATCCTGATATGTC	13	False	NA	NA	False	NA	NA	NA	45073852	45137326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45073904_45128401_45128574_45134714_45134833_45137080
transcript_91143.nic	chr21	+	904	2	ISM	ENSG00000197381.17	ENST00000462214.5	587	4	-14	8086	-14	-8086	5prime_fragment	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATTTCTTTAGTACT	-1	True	NA	NA	False	AAAAAG	-1	NA	45073838	45129240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_45073904_45128401
transcript_91144.known	chr21	-	2861	9	FSM	ENSG00000186866.17	ENST00000349485.10	2861	9	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	28.6179030503634	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTAGCTGTGGAGTGTA	-6	True	NA	-13	True	AATAAA	-14	NA	45287895	45263934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45265636_45267589_45267714_45269838_45270020_45277016_45277143_45278102_45278170_45282348_45282460_45283382_45283528_45285677_45285929_45287740
transcript_91147.known	chr21	-	598	2	FSM	ENSG00000186866.17	ENST00000476653.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCCAAAATGTTTCTC	-3	True	NA	NA	False	NA	NA	NA	45287892	45285482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45285929_45287740
transcript_91150.known	chr21	+	7540	3	FSM	ENSG00000223768.3	ENST00000400362.3	7540	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATACAACTATATATTACA	-12	True	NA	NA	False	TATAAA	-45	NA	45288049	45297806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45288166_45289350_45289439_45290470
transcript_91152.nnic	chr21	+	700	3	NNC	ENSG00000223768.3	novel	7540	3	NA	NA	2	-74	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCTCAGTCGGACACA	-25	True	NA	NA	False	NA	NA	NA	45288036	45290578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_45288166_45288975_45289439_45290470
transcript_91154.known	chr21	+	389	3	FSM	ENSG00000223768.3	ENST00000454115.7	480	3	17	74	2	-74	multi-exon	FALSE	canonical	3	5	junction_1	9.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCTCAGTCGGACACA	-10	True	NA	NA	False	NA	NA	NA	45288051	45290578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45288245_45289350_45289439_45290470
transcript_91155.known	chr21	+	4397	4	FSM	ENSG00000223768.3	ENST00000647108.1	4397	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.8770215933527	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTAGATGTGTGTGT	0	True	NA	13	True	TATAAA	-17	NA	45288061	45297354	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45288166_45289350_45289439_45290470_45293523_45296201
transcript_91157.nnic	chr21	-	818	2	Genic_Genomic	ENSG00000273796.1	novel	561	1	NA	NA	-573	0	multi-exon	FALSE	canonical	3	36	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAGTAGAAGTGGTCA	1408	False	NA	-11	True	AATAAA	-17	NA	45404942	45403808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_-_45404497_45404812
transcript_91158.known	chr21	-	561	1	FSM	ENSG00000273796.1	ENST00000617004.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAGTAGAAGTGGTCA	1981	False	NA	-11	True	AATAAA	-17	NA	45404369	45403808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45403800_45404400
transcript_91159.known	chr21	-	4991	6	FSM	ENSG00000173638.19	ENST00000311124.9	4991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.4031412966771	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCTTCCTTTTATT	-6	True	NA	-19	True	AATACA	-1	NA	45542440	45512564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_9116.known	chr1	+	1968	2	FSM	ENSG00000232265.8	ENST00000657111.1	1968	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTTTTTGAGCATTC	524	False	NA	15	True	AGTAAA	-21	NA	148156195	148158546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148156407_148156789
transcript_91160.known	chr21	-	1884	6	FSM	ENSG00000173638.19	ENST00000380010.8	1884	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	90.8748590095192	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-1	True	NA	-6	True	ATTAAA	-15	NA	45542471	45514714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45515153_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_91162.known	chr21	+	6721	2	FSM	ENSG00000233922.4	ENST00000441095.2	6721	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGGTTGATGAAATATC	-1	True	NA	NA	False	AATATA	-15	NA	45593653	45603056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45593709_45596390
transcript_91163.known	chr21	+	1986	14	FSM	ENSG00000183570.17	ENST00000400309.5	1986	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	6.55788968798373	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCTCTGGCTTGTCTCTG	138	False	NA	18	True	AATAAA	-19	NA	45849960	45942454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45850096_45896207_45896363_45899598_45899623_45900590_45900624_45900996_45901114_45909354_45909487_45910901_45911031_45913950_45914026_45917587_45917630_45929919_45929996_45930785_45930846_45935252_45935306_45940029_45940200_45941669
transcript_91164.known	chr21	+	465	1	FSM	ENSG00000274248.1	ENST00000621707.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTGGAGGGCTTGGGT	1381	False	NA	15	True	AATAAA	-19	NA	45974488	45974953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45974500_45975000
transcript_91165.known	chr21	+	4203	35	FSM	ENSG00000142156.16	ENST00000361866.8	4203	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_29	158.657876575063	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGTTATCTTCCCC	12	True	NA	22	True	AATAAA	-15	NA	45981769	46005048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45981948_45982633_45982764_45984268_45984470_45986525_45986686_45986943_45987073_45987154_45987176_45987498_45987520_45987609_45987655_45989083_45989138_45989607_45989653_45989751_45989779_45990257_45990285_45990377_45990423_45990772_45990827_45990978_45991042_45992009_45992073_45992163_45992218_45992362_45992399_45992747_45992811_45994166_45994230_45997420_45997484_45997699_45997763_45998120_45998172_45998397_45998434_45998896_45998960_45999152_45999219_45999656_45999693_46000330_46000368_46000758_46000768_46001252_46001387_46001960_46002071_46002217_46002402_46002526_46002711_46003119_46003150_46003390
transcript_91166.nic	chr21	+	1256	5	ISM	ENSG00000142173.16	ENST00000310645.9	3446	28	-7	15366	0	1490	5prime_fragment	FALSE	canonical	3	402	junction_1	89.440972154824	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGAAAGCCACATTTA	-18	True	NA	NA	False	NA	NA	NA	46098111	46114439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007
transcript_91167.known	chr21	+	3101	27	FSM	ENSG00000142173.16	ENST00000397763.5	3101	27	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_26	108.914303210308	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGAGTCCTTCTTTGCTG	-5	True	NA	17	True	NA	NA	NA	46111449	46129808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46129195
transcript_91168.known	chr21	+	3445	28	FSM	ENSG00000142173.16	ENST00000300527.9	3445	28	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	64.6630604399416	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGTGCCTGCTTGCGAGC	-18	True	NA	26	True	AATAAA	-14	NA	46098111	46132848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007_46114074_46115871_46115926_46116008_46116054_46116376_46116404_46116650_46116678_46116769_46116815_46117399_46117454_46117873_46117937_46118613_46118677_46119029_46119120_46119787_46119851_46120514_46120578_46121060_46121124_46121555_46121619_46122107_46122159_46122495_46122532_46122874_46122938_46124650_46124714_46124884_46124921_46125265_46125312_46125464_46125618_46125784_46126238_46126502_46126542_46131953
transcript_91170.known	chr21	-	1182	4	FSM	ENSG00000160284.15	ENST00000330205.10	1182	4	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_2	16.4991582276861	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCTCTTTGAGGGCG	NA	False	NA	1	True	ATTAAA	-27	NA	46184476	46161147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46161706_46161915_46162068_46168307_46168659_46184355
transcript_91172.known	chr21	-	4886	22	FSM	ENSG00000160285.15	ENST00000397728.8	4886	22	0	0	0	0	multi-exon	TRUE	canonical	3	356	junction_21	67.2864051459158	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	12	True	NA	-1	True	ATTAAA	-17	NA	46228774	46188445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_91173.known	chr21	-	2523	22	FSM	ENSG00000160285.15	ENST00000522411.5	2523	22	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_18	122.697256611733	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTTCTGACCAATAGC	5	True	NA	NA	False	NA	NA	NA	46228781	46190782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222662_46222739_46227551_46227691_46228433_46228600_46228731
transcript_91177.known	chr21	-	517	3	FSM	ENSG00000160285.15	ENST00000419093.5	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	245.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGATTAAAAATCAGTC	4248	False	NA	-29	True	NA	NA	NA	46194580	46188473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46188822_46191880_46191960_46194490
transcript_9118.nnic	chr1	+	699	2	Antisense	novelGene_ENSG00000227733.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	28	junction_1	0	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCAGGTATGTCTT	NA	False	NA	3	True	ATTAAA	-21	NA	148201282	148203380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_148201489_148202887
transcript_91182.known	chr21	+	3213	4	FSM	ENSG00000215424.10	ENST00000664725.1	3213	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	9.2736184954957	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGAAACCTTACCTTAGT	8	True	NA	NA	False	ATTAAA	-3	NA	46229228	46246292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46243406
transcript_91183.known	chr21	+	2621	4	FSM	ENSG00000215424.10	ENST00000669476.1	2621	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	9.8770215933527	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACTCGTTCTTTTTTTTTT	0	True	NA	NA	False	TTTAAA	-16	NA	46229220	46251871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46236223_46236327_46240833_46241020_46249585
transcript_91190.known	chr21	+	2302	3	FSM	ENSG00000215424.10	ENST00000432735.5	2302	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	13	True	NA	NA	False	GATAAA	-41	NA	46229233	46242999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46236223_46236327_46240833
transcript_91193.known	chr21	+	703	3	FSM	ENSG00000215424.10	ENST00000590829.5	703	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCAGTGAGCAGAGATC	-4	True	NA	NA	False	NA	NA	NA	46229216	46259390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46240833_46241020_46258923
transcript_91196.known	chr21	+	2193	2	FSM	ENSG00000215424.10	ENST00000444998.1	2193	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	19	False	NA	NA	False	GATAAA	-41	NA	46229239	46242999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46240833
transcript_91197.known	chr21	+	1947	2	FSM	ENSG00000215424.10	ENST00000420074.1	1947	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGGGATGTCAATAAAC	303	False	NA	NA	False	AATAAA	-15	NA	46229523	46235453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46230528_46234510
transcript_91198.known	chr21	-	570	4	FSM	ENSG00000160294.11	ENST00000481113.1	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	36.1201698039567	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTTTACTTCTGTGT	4292	False	NA	-10	True	TATAAA	-16	NA	46256986	46251514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46251683_46254391_46254527_46254775_46254845_46256788
transcript_91199.known	chr21	+	2280	2	FSM	ENSG00000215424.10	ENST00000421927.1	2280	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	26	False	NA	NA	False	GATAAA	-41	NA	46229246	46242999	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229364_46240836
transcript_91200.known	chr21	+	2386	3	FSM	ENSG00000215424.10	ENST00000656253.1	2386	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAAAGACTTTCAGGAAA	3	True	NA	NA	False	AAAACA	-44	NA	46229223	46251745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46240836_46241020_46249585
transcript_91205.known	chr21	+	534	5	FSM	ENSG00000182362.14	ENST00000397694.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	83.6491930624558	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	14	True	NA	9	True	AATAAA	-16	NA	46286383	46297723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286416_46286869_46286989_46291333_46291463_46296161_46296231_46297538
transcript_91208.known	chr21	+	739	5	FSM	ENSG00000182362.14	ENST00000397701.9	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_3	15.039531242695	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	-28	True	NA	37	True	AATAAA	-44	NA	46286341	46297751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286416_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_91215.known	chr21	+	764	5	FSM	ENSG00000182362.14	ENST00000397691.1	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	83.3407913329361	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	3	True	NA	37	True	AATAAA	-44	NA	46286644	46297751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286744_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_91219.known	chr21	+	433	4	FSM	ENSG00000182362.14	ENST00000397692.5	433	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	95.1361597337673	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	14	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286416_46286869_46286989_46296161_46296231_46297538
transcript_91221.nic	chr21	+	661	4	NIC	ENSG00000182362.14	novel	739	5	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	82.9015480354056	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	87	False	NA	9	True	AATAAA	-16	NA	46286262	46297723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_46286416_46286869_46287124_46296161_46296231_46297538
transcript_91224.known	chr21	+	890	4	FSM	ENSG00000182362.14	ENST00000339195.10	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	78.6949101841338	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	14	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286738_46286869_46287124_46296161_46296231_46297538
transcript_91225.known	chr21	+	912	3	FSM	ENSG00000182362.14	ENST00000468924.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	15.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGAAAGGCTGGAGT	-15	True	NA	NA	False	NA	NA	NA	46286354	46291930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286416_46286869_46287124_46291333
transcript_91230.known	chr21	+	1402	3	FSM	ENSG00000182362.14	ENST00000492864.1	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	82	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTTGTACTATTGACG	18	False	NA	NA	False	AAAACA	-16	NA	46286453	46292197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286738_46286869_46287124_46291333
transcript_91231.nic	chr21	+	2420	14	ISM	ENSG00000160299.17	ENST00000359568.10	10526	47	-99	82196	-84	10247	5prime_fragment	FALSE	canonical	3	27	junction_1	5.88851052584758	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGACTGGAAAGTTATGAAG	3359	False	NA	NA	False	AAGAAA	-6	NA	46324056	46363573	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346742_46346999_46347456_46347513_46349011_46349187_46349683_46349821_46351428_46351541_46353103_46353327_46353986_46354069_46355451_46355627_46356973_46357192_46363479
transcript_91234.nic	chr21	+	1187	2	ISM	ENSG00000160299.17	ENST00000480896.5	10485	47	119233	0	3127	0	3prime_fragment	FALSE	canonical	3	200	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTGTGTTGTTTTTTTT	NA	False	NA	44	True	AATAAA	-28	NA	46444120	46445769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46444822_46445283
transcript_91235.known	chr21	+	1415	8	FSM	ENSG00000160299.17	ENST00000490468.5	1415	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	16.6770035971571	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAACAGCTGGAG	1	True	NA	NA	False	NA	NA	NA	46324140	46349800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46324283_46326376_46326590_46334396_46334769_46346127_46346209_46346722_46346982_46347456_46347513_46349011_46349187_46349683
transcript_91236.known	chr21	+	2063	15	FSM	ENSG00000160305.18	ENST00000494435.5	2063	15	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_3	14.1211955324366	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTTGGCCCAGTGTTT	NA	False	NA	2	True	AATAAA	-14	NA	46504379	46546304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46504490_46509256_46509377_46511416_46511615_46529091_46529184_46532126_46532238_46533523_46533648_46534003_46534114_46534584_46534688_46537223_46537289_46537445_46537540_46538482_46538603_46539876_46539992_46541755_46541896_46545136_46545274_46545880
transcript_91237.known	chr21	-	1109	3	FSM	ENSG00000160307.10	ENST00000291700.9	1109	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	0.5	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGAGGCAGGTGGATCAC	-1	True	NA	NA	False	AATAAA	-18	NA	46605082	46598603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46599504_46602277_46602417_46605012
transcript_91240.known	chr21	+	2354	12	FSM	ENSG00000160310.19	ENST00000355680.8	2354	12	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_11	175.811788922037	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	7	True	NA	NA	False	ATTAAA	-16	NA	46635673	46665124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_91242.known	chr21	+	2131	11	FSM	ENSG00000160310.19	ENST00000397638.6	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	170.309277492449	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	8834	False	NA	24	True	AATAAA	-24	NA	46635614	46664951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_91249.known	chr21	+	1932	9	FSM	ENSG00000160310.19	ENST00000440086.5	1932	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	230.324736784827	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	14	True	NA	NA	False	ATTAAA	-16	NA	46635680	46665124	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46661799_46661937_46663382_46663555_46664294
transcript_91253.nic	chr21	+	1581	9	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-58	3854	1	0	5prime_fragment	FALSE	canonical	3	273	junction_1	173.783944525954	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	8835	False	NA	3	True	AATAAA	-16	NA	46635615	46661270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_91256.nic	chr21	+	1482	8	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	-9	3681	-9	0	5prime_fragment	FALSE	canonical	3	286	junction_7	140.175837097991	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	8825	False	NA	3	True	AATAAA	-16	NA	46635605	46661270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_91257.known	chr21	+	1874	8	FSM	ENSG00000160310.19	ENST00000458387.6	1874	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	237.042922144441	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGGCTGGGTGCAGT	8814	False	NA	NA	False	ATTAAA	-9	NA	46635594	46665117	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46663382_46663555_46664294
transcript_9126.nnic	chr1	-	1376	4	NIC	ENSG00000274020.4	novel	1050	3	NA	NA	-3	0	intron_retention	FALSE	canonical	2	3	junction_3	0.471404520791032	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	-4	True	NA	-3	True	AATAAA	-16	NA	148459962	148432958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_148433644_148435145_148435355_148436443_148436565_148459601
transcript_91267.known	chr21	+	1334	7	FSM	ENSG00000160310.19	ENST00000334494.8	1334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	237.339243840261	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTCATACATTAGCA	-14	True	NA	NA	False	AATAAA	-16	NA	46635652	46652318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46651805
transcript_91270.nic	chr21	+	1166	7	NIC	ENSG00000160310.19	novel	1011	7	NA	NA	-9	190	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	228.783558558448	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAACCACATTATGACGA	8825	False	NA	NA	False	AATAAA	-16	NA	46635605	46653142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46652844
transcript_91273.nic	chr21	+	2268	7	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	-9	4807	-9	714	5prime_fragment	FALSE	canonical	3	395	junction_6	105.107352528525	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGAAGTTACTGCTTTG	8825	False	NA	41	True	ATTAAA	-21	NA	46635605	46660144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744
transcript_91276.known	chr21	+	1011	7	FSM	ENSG00000160310.19	ENST00000291705.11	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	230.207454749455	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGGGTCCTTCACAGAC	-25	True	NA	NA	False	NA	NA	NA	46635641	46664473	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46664294
transcript_91278.nic	chr21	+	1116	7	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-58	15236	1	0	5prime_fragment	FALSE	canonical	3	273	junction_1	176.444514413644	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	8835	False	NA	32	True	NA	NA	NA	46635615	46649888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_9128.nnic	chr1	-	1991	4	NNC	ENSG00000274020.4	novel	1050	3	NA	NA	-20	-2	intron_retention	FALSE	canonical	0	0	junction_1	11.6714276000077	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCAGCGGCTTATCCTTG	924	False	NA	-6	True	AATAAA	-13	NA	148459979	148432961	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_148434240_148434435_148434562_148435145_148435355_148459601
transcript_91284.known	chr21	+	954	6	FSM	ENSG00000160310.19	ENST00000397628.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	74.4215022691695	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	7	True	NA	37	True	NA	NA	NA	46635673	46649893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_91292.known	chr21	+	493	2	FSM	ENSG00000160310.19	ENST00000498151.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	NA	False	NA	37	True	NA	NA	NA	46648507	46649893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46648620_46649512
transcript_91293.known	chr22	+	568	4	FSM	ENSG00000237438.7	ENST00000609932.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTCATGTCAAACAGT	NA	False	NA	NA	False	NA	NA	NA	17037238	17060825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17037345_17044872_17045001_17047323_17047427_17060594
transcript_91296.known	chr22	+	1175	4	FSM	ENSG00000235478.6	ENST00000441544.3	1231	4	55	1	9	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGATGCACTCAGTCTTTT	6	True	NA	NA	False	ATTAAA	-20	NA	17121594	17132104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17122040_17124654_17124772_17130361_17130485_17131614
transcript_91298.nic	chr22	-	2246	8	NIC	ENSG00000069998.12	novel	1735	8	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	120	junction_7	269.070357235533	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	200	False	NA	-11	True	AATAAA	-28	NA	17159057	17137521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17158456
transcript_91299.known	chr22	-	1799	8	FSM	ENSG00000069998.12	ENST00000336737.8	1799	8	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_7	106.005005657704	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGAAGCTCTGTCTG	-20	True	NA	-9	True	AATAAA	-30	NA	17159277	17137519	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17159125
transcript_91310.nnic	chr22	+	324	2	FSM	ENSG00000185837.4	ENST00000689229.1	297	2	-29	2	-24	-2	multi-exon	FALSE	canonical	3	5	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCCCTTGTCTCTTTTT	NA	False	NA	5	True	AATAAA	-20	NA	17159327	17165445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17159475_17165268
transcript_91311.known	chr22	+	339	2	FSM	ENSG00000185837.4	ENST00000329743.4	379	2	32	8	27	-8	multi-exon	FALSE	canonical	3	6	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATATGTCCCTTGTCT	20	False	NA	-1	True	AATAAA	-14	NA	17159383	17165439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17159552_17165268
transcript_91312.known	chr22	+	616	2	FSM	ENSG00000185837.4	ENST00000431923.2	660	2	42	2	42	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCCCTTGTCTCTTTTT	35	False	NA	5	True	AATAAA	-20	NA	17159398	17165445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17159838_17165268
transcript_91314.known	chr22	-	3195	7	FSM	ENSG00000093072.18	ENST00000330232.8	3195	7	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	12.3153021346074	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGTCACTGTGTC	NA	False	NA	-8	True	AATAAA	-13	NA	17199783	17179305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17199548
transcript_91315.nic	chr22	-	1201	3	ISM	ENSG00000093072.18	ENST00000330232.8	3195	7	175	9714	-12	764	5prime_fragment	FALSE	canonical	3	201	junction_2	14.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCTAGATTAGTCCAGGG	18	True	NA	NA	False	NA	NA	NA	17199608	17189019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_17190033_17191682_17191811_17199548
transcript_91317.known	chr22	+	333	2	FSM	ENSG00000203416.3	ENST00000344033.5	333	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCGCCTGCCCCCAGTAG	NA	False	NA	NA	False	NA	NA	NA	17213515	17214155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17213757_17214063
transcript_91319.nnic	chr22	+	968	8	NIC	ENSG00000099954.19	novel	10030	19	NA	NA	268	24701	combination_of_known_splicesites	FALSE	canonical	2	14	junction_3	3.22616851161035	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGAAGAAGAGCGTCA	100	False	NA	NA	False	AATAGA	-17	NA	17369727	17524159	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_17369910_17477587_17477683_17497402_17497587_17499409_17499550_17500630_17500736_17503081_17503132_17504846_17505017_17524117
transcript_9132.nnic	chr1	-	1107	3	NIC	ENSG00000274020.4	novel	1050	3	NA	NA	23	0	intron_retention	FALSE	canonical	1	1	junction_2	1.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	967	False	NA	-3	True	AATAAA	-16	NA	148459936	148432958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_148433644_148435145_148435233_148459601
transcript_91323.known	chr22	+	2186	11	FSM	ENSG00000182902.14	ENST00000327451.11	2186	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	15.3088209866077	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGTCACTCTTCAAACT	3	True	NA	NA	False	ATTAAA	-18	NA	17563497	17590995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17563714_17569923_17569987_17579744_17579965_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_91324.nnic	chr22	+	1864	9	NNC	ENSG00000182902.14	novel	2454	4	NA	NA	10860	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	8.8140512819021	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATCTGTTCATCA	NA	False	NA	3	True	AATAAA	-12	NA	17580566	17590881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_17580858_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_91325.nnic	chr22	+	1745	8	NNC	ENSG00000182902.14	novel	2454	4	NA	NA	10860	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	13.3950950511212	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATCTGTTCATCA	NA	False	NA	3	True	AATAAA	-12	NA	17580566	17590881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_17580858_17581036_17581160_17581357_17581414_17582562_17582654_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_91326.known	chr22	+	2057	10	FSM	ENSG00000182902.14	ENST00000399813.1	2057	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.6969761969749	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCATCTGTTCATCA	6	True	NA	3	True	AATAAA	-12	NA	17563449	17590881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17563714_17579744_17579965_17581036_17581160_17581357_17581414_17582562_17582654_17583415_17583535_17587135_17587302_17587924_17588080_17589589_17589666_17590094
transcript_91327.known	chr22	-	994	8	FSM	ENSG00000131100.13	ENST00000399798.6	994	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	153.411544679064	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGTTGCATGGGCT	12	True	NA	39	True	NA	NA	NA	17628749	17592408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17628602
transcript_91329.known	chr22	-	1333	9	FSM	ENSG00000131100.13	ENST00000253413.10	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	37.3689376354212	4018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	12	True	NA	3	True	NA	NA	NA	17628749	17592135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_9133.known	chr1	-	1050	3	FSM	ENSG00000274020.4	ENST00000613452.1	1050	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	12	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	1146	False	NA	-3	True	AATAAA	-16	NA	148459757	148432958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148433644_148435145_148435355_148459601
transcript_91330.known	chr22	-	1208	8	FSM	ENSG00000131100.13	ENST00000399796.6	1208	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	165.812040132981	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGATTTCTAGTGT	14	True	NA	-30	True	ATTAAA	-14	NA	17628747	17592168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_91331.known	chr22	+	4961	6	FSM	ENSG00000099968.18	ENST00000618481.4	4961	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	72.7725222869182	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	9725	False	NA	NA	False	NA	NA	NA	17638583	17730855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17638887_17683213_17683322_17688985_17689143_17696140_17696211_17702242_17702387_17726676
transcript_91334.known	chr22	+	4817	5	FSM	ENSG00000099968.18	ENST00000611738.4	4817	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	98.4695384370212	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATCTCTCAATTAT	9725	False	NA	NA	False	NA	NA	NA	17638583	17730855	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17638887_17683213_17683322_17688985_17689143_17696140_17696211_17726676
transcript_91341.known	chr22	+	2112	6	FSM	ENSG00000099968.18	ENST00000493680.5	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_4	40.0869055927244	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATATTTTTTGAGC	23	False	NA	-31	True	AATAAA	-24	NA	17638771	17703733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242
transcript_91342.known	chr22	+	4458	5	FSM	ENSG00000099968.18	ENST00000355028.4	4458	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	107.368524251756	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTTTCTCTTAATTT	3	True	NA	7	True	AATAAA	-19	NA	17638810	17730622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17726676
transcript_91343.known	chr22	-	2495	6	FSM	ENSG00000015475.19	ENST00000317361.11	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	206.785879595295	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	475	False	NA	0	True	AATAAA	-18	NA	17774016	17734137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17773609
transcript_91346.known	chr22	-	700	6	FSM	ENSG00000015475.19	ENST00000551952.5	700	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	217.585477456562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCGATGTGGTCACAG	NA	False	NA	NA	False	NA	NA	NA	17774665	17735551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774639
transcript_91348.known	chr22	-	907	5	FSM	ENSG00000015475.19	ENST00000399767.6	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	223.194281960807	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGGCCTTCATAT	-4	True	NA	-39	True	AATATA	-27	NA	17774495	17735363	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17774380
transcript_9135.known	chr1	-	1108	5	FSM	ENSG00000274020.4	ENST00000652758.1	1108	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.06155281280883	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTTTATTATTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	148334975	148290888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148291305_148295749_148295914_148296123_148296183_148296272_148296500_148334733
transcript_91351.known	chr22	-	1879	4	FSM	ENSG00000015475.19	ENST00000399765.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	245.837796569653	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGTTTGGAAATAAA	2	True	NA	-37	True	AAAAAG	-23	NA	17774489	17734174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17774380
transcript_91354.known	chr22	-	2177	6	FSM	ENSG00000015475.19	ENST00000622694.5	2177	6	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	88.9966291496481	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-16	True	NA	0	True	AATAAA	-18	NA	17774469	17734137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774380
transcript_91355.nic	chr22	-	1507	7	NIC	ENSG00000243156.9	novel	9447	32	NA	NA	-9	5647	combination_of_known_junctions	TRUE	canonical	3	17	junction_3	3.1446603773522	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGATTTGGTTTGTGGTTA	-7	True	NA	NA	False	CATAAA	-18	NA	18001510	17899080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_17899549_17900841_17900998_17901877_17901980_17902630_17902748_17904631_17904840_17906548_17906887_18001392
transcript_91359.known	chr22	-	5113	19	FSM	ENSG00000243156.9	ENST00000495076.5	5113	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	7.34510839157263	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCATCTTAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	18001501	17839591	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17842018_17864898_17864987_17865923_17866013_17871836_17872024_17885877_17886052_17887169_17887233_17887322_17887436_17889033_17889231_17891484_17891633_17893807_17893905_17895283_17895411_17896245_17896362_17896723_17896982_17900841_17900998_17901877_17901980_17902630_17902748_17904631_17904840_17906548_17906887_18001392
transcript_91360.known	chr22	+	1518	5	FSM	ENSG00000183785.16	ENST00000316027.10	1518	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.48746859276655	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCTTTATTTATG	-7	True	NA	15	True	AATATA	-14	NA	18110686	18131154	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18110840_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_91361.known	chr22	+	1858	11	FSM	ENSG00000184979.10	ENST00000215794.8	1858	11	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	4.60434577328853	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	-1	True	NA	NA	False	AATAAA	-17	NA	18150169	18177397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18150223_18157557_18157821_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_91365.nnic	chr22	+	1552	8	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	14498	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	9.02151623076968	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	8312	False	NA	NA	False	AATAAA	-17	NA	18164667	18177397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18164921_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_91366.nnic	chr22	+	1360	8	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	15390	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	9.02151623076968	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	9204	False	NA	NA	False	AATAAA	-17	NA	18165559	18177397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18165621_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_91370.known	chr22	-	1787	4	FSM	ENSG00000274602.5	ENST00000619742.4	1787	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	58.8104299139759	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTGGAATCTGTGAGG	NA	False	NA	NA	False	AATAAA	-15	NA	18537865	18533656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_18534054_18535244_18535329_18535858_18535949_18536649
transcript_91371.known	chr22	-	2425	3	FSM	ENSG00000274602.5	ENST00000610959.4	2425	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	25	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	18537791	18533645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_18534054_18535244_18535329_18535858
transcript_91372.known	chr22	+	1199	6	FSM	ENSG00000183628.14	ENST00000427407.5	1199	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	52.2264300905203	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCATGTGGCTTGTGTGA	22	True	NA	NA	False	AATAAA	-16	NA	18906350	18912082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18906485_18906564_18906726_18909979_18910099_18910171_18910273_18910887_18911029_18911539
transcript_91374.known	chr22	+	1117	5	FSM	ENSG00000183628.14	ENST00000331444.12	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	23.0705439901187	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTGTGTGATAGCTG	-9	True	NA	NA	False	AATAAA	-22	NA	18906319	18912088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18906485_18906564_18906726_18910171_18910273_18910887_18911029_18911539
transcript_91379.nnic	chr22	+	1140	3	NNC	ENSG00000284294.1	novel	1214	2	NA	NA	-555	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	5.5	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	1482	False	NA	6	True	NA	NA	NA	18938890	18947741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939003_18939672_18939750_18946790
transcript_91380.nnic	chr22	+	1356	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	12	18	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	11	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	2049	False	NA	24	True	NA	NA	NA	18939457	18947759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939750_18945071_18945167_18946790
transcript_91381.nnic	chr22	+	1322	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	12	18	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	5	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	2049	False	NA	24	True	NA	NA	NA	18939457	18947759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939750_18945105_18945167_18946790
transcript_91382.nnic	chr22	+	1456	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	12	18	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	3.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	2049	False	NA	24	True	NA	NA	NA	18939457	18947759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939750_18945105_18945301_18946790
transcript_91383.known	chr22	+	1837	2	FSM	ENSG00000183628.14	ENST00000608842.1	1837	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTGGGTCGTGCTGTA	24	True	NA	NA	False	NA	NA	NA	18906352	18908269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18906485_18906564
transcript_91386.nic	chr22	+	1286	2	ISM	ENSG00000284294.1	ENST00000640084.1	1382	4	3004	0	-31	0	3prime_fragment	FALSE	canonical	3	38	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	2006	False	NA	6	True	NA	NA	NA	18939414	18947741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_18939750_18946790
transcript_91387.known	chr22	+	1214	2	FSM	ENSG00000284294.1	ENST00000638287.1	1214	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCTGGCGGGATCCTCC	2037	False	NA	6	True	AATAAA	-15	NA	18939445	18947692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18939758_18946790
transcript_91388.known	chr22	+	812	4	FSM	ENSG00000183628.14	ENST00000436645.1	812	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.5717754100247	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCCGCATGTGGCTTGT	2334	False	NA	NA	False	AATAAA	-12	NA	18908662	18912078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18908694_18910171_18910273_18910887_18911029_18911539
transcript_91389.known	chr22	-	4484	11	FSM	ENSG00000070413.20	ENST00000545799.5	4484	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	222.013062678753	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTAGTCCTTGGTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	19122454	19036281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065059_19065184_19065190_19068095_19068226_19089367_19089491_19122127
transcript_91392.known	chr22	-	4438	10	FSM	ENSG00000070413.20	ENST00000263196.12	4438	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	176.91184943111	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	1	True	NA	-5	True	AATAAA	-15	NA	19122412	19036285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_91394.nnic	chr22	-	716	2	NNC	ENSG00000070413.20	novel	4361	9	NA	NA	-16	-41758	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTATGGTGGTATGTG	-15	True	NA	NA	False	AATAAA	-14	NA	19122428	19098751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_19099167_19122127
transcript_91396.known	chr22	-	2101	10	FSM	ENSG00000100056.12	ENST00000472073.1	2101	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	40.3129731286237	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTGTCATTAAAGAACA	5758	False	NA	-37	True	NA	NA	NA	19144633	19133967	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144056
transcript_91397.nic	chr22	-	2091	10	NIC	ENSG00000100056.12	novel	2101	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_9	41.1873167580554	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGGGTTGCCTCTCCA	4	True	NA	-6	True	ATTAAA	-17	NA	19144659	19133936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144123
transcript_91398.known	chr22	-	5359	10	FSM	ENSG00000100056.12	ENST00000252137.11	5359	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	15.2784848321236	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGCTTCTCGTTAT	12	True	NA	-3	True	GATAAA	-16	NA	19144651	19130278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
transcript_91404.known	chr22	-	1808	10	FSM	ENSG00000100056.12	ENST00000434568.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	53.8030243768765	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGGGTTGCCTCTCCA	5707	False	19144700	-6	True	ATTAAA	-17	NA	19144684	19133936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138302_19138480_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
transcript_91405.nnic	chr22	+	968	2	Genic_Genomic	ENSG00000260924.2	novel	1445	1	NA	NA	297	-7	multi-exon	FALSE	canonical	2	5	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATCCTCGACCAAG	-12	True	NA	16	True	AATAAA	-18	NA	19171691	19172832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr22_+_19171852_19172024
transcript_91406.known	chr22	+	1445	1	FSM	ENSG00000260924.2	ENST00000565162.2	1445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCGACCAAGATAGTGT	NA	False	NA	23	True	AATAAA	-25	NA	19171394	19172839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19171400_19172800
transcript_91408.known	chr22	-	1514	9	FSM	ENSG00000100075.10	ENST00000451283.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_8	575.608373809833	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	340	False	NA	-27	True	AATAAA	-4	NA	19178521	19175592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178386
transcript_91409.known	chr22	-	1548	9	FSM	ENSG00000100075.10	ENST00000215882.10	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_8	160.180367086606	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	0	True	NA	-15	True	AATAAA	-16	NA	19178736	19175580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
transcript_9141.nnic	chr1	+	1098	4	NNC	ENSG00000231551.8	novel	1082	4	NA	NA	-39	-14	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	4.49691252107735	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGCCAATAGTATGG	NA	False	NA	NA	False	AATAAA	-15	NA	148402476	148425205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_148402666_148420371_148420608_148424062_148424157_148424626
transcript_91414.nnic	chr22	-	1277	7	NIC	ENSG00000100075.10	novel	1514	9	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	3	71	junction_5	837.397041764273	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	-53	True	NA	-15	True	AATAAA	-16	NA	19178511	19175580	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19178132_19178241_19178386
transcript_91419.known	chr22	-	5518	33	FSM	ENSG00000070371.16	ENST00000427926.6	5518	33	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_21	9.86708543593294	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTGCTTGGTGCTGG	-8	True	NA	3	True	ATTAAA	-20	NA	19291719	19179472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19179970_19180198_19180239_19180730_19180807_19183389_19183612_19187557_19187729_19187980_19188092_19191303_19191436_19196265_19196416_19196488_19196657_19199733_19199842_19201328_19201494_19208153_19208312_19208921_19209115_19210325_19210510_19216110_19216257_19219884_19220008_19221376_19221612_19221950_19222094_19222683_19222810_19223890_19224055_19225452_19225634_19226218_19226384_19229837_19229976_19232475_19232599_19233165_19233319_19233421_19233623_19234508_19234707_19235695_19235870_19239274_19239389_19242774_19242937_19253958_19254228_19275622_19275831_19291599
transcript_91420.known	chr22	-	4053	25	FSM	ENSG00000100084.14	ENST00000263208.5	4053	25	0	0	0	0	multi-exon	TRUE	canonical	3	236	junction_22	49.904840001302	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCCTGATTTCTCTTGCC	-14	True	NA	-8	True	AATAAA	-23	NA	19431733	19330697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19331557_19351357_19351447_19353355_19353520_19353995_19354119_19355759_19355866_19356229_19356289_19356889_19357052_19359335_19359485_19361236_19361342_19361726_19361932_19375630_19375793_19377868_19378067_19383619_19383706_19385520_19385737_19387710_19387817_19388483_19388555_19392100_19392215_19394341_19394510_19396786_19396948_19397991_19398088_19405785_19405881_19407183_19407275_19408482_19408594_19410715_19410779_19431439
transcript_91425.known	chr22	+	954	4	FSM	ENSG00000185608.9	ENST00000443660.5	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	180.342883296113	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATGCTCCTTTGTC	41	False	NA	18	True	AATAAA	-10	NA	19432578	19436067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19432860_19433264_19433349_19434735_19434895_19435637
transcript_91430.known	chr22	-	1005	3	FSM	ENSG00000242259.9	ENST00000399568.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_2	10	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	13	True	NA	-37	True	AATAAA	-15	NA	19447692	19440885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19441695_19447377_19447546_19447664
transcript_91432.known	chr22	-	3720	3	FSM	ENSG00000242259.9	ENST00000399562.9	3720	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	179	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-6	True	NA	-37	True	AATAAA	-15	NA	19447711	19440885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19444391_19447377_19447546_19447664
transcript_91434.known	chr22	+	744	4	FSM	ENSG00000185608.9	ENST00000333130.4	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	45.38232646698	2796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTTGTCTTGTGTTA	7	True	NA	26	True	AATAAA	-18	NA	19432544	19436075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19432608_19433264_19433349_19434735_19434895_19435637
transcript_9144.known	chr1	+	3642	1	FSM	ENSG00000177144.8	ENST00000322209.5	3642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAAAATATAAAACTTTTA	NA	False	NA	NA	False	AATAAA	-34	NA	148748773	148752415	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148748800_148752400
transcript_91440.nic	chr22	-	937	10	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_9	283.967525529867	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-1	True	NA	-5	True	AATAAA	-17	NA	19479215	19450620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19479082
transcript_91447.known	chr22	+	2097	2	FSM	ENSG00000185065.6	ENST00000431090.1	2097	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTCTTCTGAGTGGTG	445	False	NA	NA	False	AATAAA	-19	NA	19447892	19450105	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19448326_19448441
transcript_91448.known	chr22	-	1791	12	FSM	ENSG00000070010.19	ENST00000263202.15	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_11	63.568665288895	3217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-10	True	NA	-17	True	ATTAAA	-14	NA	19479193	19449910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_91449.known	chr22	-	1007	12	FSM	ENSG00000070010.19	ENST00000399523.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	256.690603871085	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	11	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19450745_19454801_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_9145.known	chr1	+	2746	17	FSM	ENSG00000178104.19	ENST00000479408.6	2746	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	41.4935518333873	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGCCAATAAAGTTTAT	NA	False	NA	-13	True	NA	NA	NA	148951936	148981746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148952155_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_91450.known	chr22	-	994	5	FSM	ENSG00000070010.19	ENST00000489406.1	994	5	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_4	20.1246117974981	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAAGGTATCAGGTTCT	-4	True	NA	NA	False	NA	NA	NA	19479187	19467402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_91451.known	chr22	-	293	3	FSM	ENSG00000070010.19	ENST00000474226.1	293	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	399.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACCAACCCCAAAGCC	70	False	NA	NA	False	NA	NA	NA	19479144	19467894	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19468004_19471686_19471809_19479082
transcript_91452.known	chr22	+	1879	19	FSM	ENSG00000093009.11	ENST00000263201.7	1879	19	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	24.9945673109524	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTGGCTCTGGTCTC	-2	True	NA	22	True	AATAAA	-22	NA	19479919	19520608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_91453.known	chr22	+	1979	20	FSM	ENSG00000093009.11	ENST00000438587.6	1979	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	74.7494429703441	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTCCCCATTGTGGCTC	-12	True	NA	15	True	AATAAA	-15	NA	19479909	19520601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19480020_19480157_19480218_19480685_19480780_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516813_19516894_19518843_19518910_19520480
transcript_91454.known	chr22	+	1519	16	FSM	ENSG00000093009.11	ENST00000672837.1	1519	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	69.5889518689729	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCATTGTGGCTCTGGT	-6	True	NA	19	True	AATAAA	-19	NA	19479915	19520605	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_91455.known	chr22	+	1693	18	FSM	ENSG00000093009.11	ENST00000404724.7	1693	18	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	49.1922293917032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAATGCTTATTTT	16	True	NA	-8	True	NA	NA	NA	19479937	19520578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_91456.known	chr22	+	469	4	FSM	ENSG00000093009.11	ENST00000493724.1	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	5.09901951359278	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTCCGTCCCCATT	NA	False	NA	8	True	AATAAA	-8	NA	19516433	19520594	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19516646_19516816_19516894_19518843_19518910_19520480
transcript_91458.known	chr22	+	1974	12	FSM	ENSG00000184702.20	ENST00000406395.5	1974	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	20.5840345738838	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGTCCTGTCCTGGTGA	2	True	NA	-11	True	NA	NA	NA	19714503	19723274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721832_19721958_19722236_19722340_19722427
transcript_9146.known	chr1	+	8824	17	FSM	ENSG00000178104.19	ENST00000529945.2	8824	17	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	20.3867872346282	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTTTTATTCTTAA	194	False	NA	10	True	AATAAA	-22	NA	148952340	148986477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_91468.nic	chr22	-	1605	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	5	0	combination_of_known_splicesites	TRUE	canonical	3	60	junction_7	34.7680359889743	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	12	True	NA	-8	True	AATAAA	-14	NA	19854869	19788414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854659
transcript_9147.known	chr1	-	4527	21	FSM	ENSG00000269713.8	ENST00000613595.4	4527	21	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_7	19.4228602425081	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATTTTCTAATCTCTT	115	False	NA	NA	False	AATAAA	-16	NA	149082311	149054032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149055900_149056511_149056621_149060522_149060696_149061331_149061384_149062092_149062266_149062861_149062914_149063632_149063806_149064430_149064483_149065525_149065690_149069593_149069646_149070933_149071140_149071603_149071677_149072717_149072933_149073767_149073871_149075654_149075865_149077207_149077420_149077882_149077956_149079006_149079222_149080052_149080156_149081964_149082175_149082271
transcript_91470.known	chr22	-	6642	8	FSM	ENSG00000185838.14	ENST00000329517.11	6642	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	16.1321076725635	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCATAACAGCCATTCTG	7	True	NA	NA	False	AATAAA	-15	NA	19854874	19783222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
transcript_91474.nic	chr22	-	1344	7	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	51.4373945253408	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-13	True	NA	-8	True	AATAAA	-14	NA	19854894	19788414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19821227_19821376_19854442_19854540_19854819
transcript_91479.nic	chr22	-	1331	6	NIC	ENSG00000185838.14	novel	1197	6	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_4	55.6826723496637	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	12	True	NA	-8	True	AATAAA	-14	NA	19854869	19788414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854659
transcript_91480.known	chr22	-	1197	6	FSM	ENSG00000185838.14	ENST00000460402.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	66.9644681902276	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTGCCAGCTGAG	75	False	NA	-57	True	NA	NA	NA	19854806	19788463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854681
transcript_91481.nic	chr22	-	1273	6	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	48.8204875026868	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-8	True	AATAAA	-14	NA	19854971	19788414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854819
transcript_91483.nnic	chr22	-	1110	5	NIC	ENSG00000185838.14	novel	6642	8	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	60.2053776667832	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	NA	False	NA	-8	True	AATAAA	-14	NA	19854971	19788414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19854442_19854540_19854819
transcript_91495.known	chr22	-	1385	3	FSM	ENSG00000215012.9	ENST00000484072.5	1385	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	68.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	18	True	NA	-7	True	AATAAA	-16	NA	19854863	19846145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19847390_19854442_19854540_19854819
transcript_91496.known	chr22	-	6653	3	FSM	ENSG00000215012.9	ENST00000328554.9	6653	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	3.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	7	True	NA	-7	True	AATAAA	-16	NA	19854874	19846145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19852487_19854442_19854540_19854659
transcript_91497.known	chr22	-	730	3	FSM	ENSG00000215012.9	ENST00000416337.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	20	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGGTGGACTTCTGCTG	18	True	NA	NA	False	NA	NA	NA	19854816	19851988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19852487_19854442_19854540_19854681
transcript_91498.known	chr22	-	6523	3	FSM	ENSG00000215012.9	ENST00000407472.5	6523	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	45	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGCTTGTGTTTTCC	-15	True	NA	1	True	AATAAA	-24	NA	19854896	19846137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19852487_19854442_19854540_19854819
transcript_91504.known	chr22	+	801	1	FSM	ENSG00000235776.2	ENST00000424559.2	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	NA	False	NA	NA	False	ACTAAA	-10	NA	19792293	19793094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19792300_19793100
transcript_91505.known	chr22	-	1699	7	FSM	ENSG00000185838.14	ENST00000403325.5	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	17.3148940382422	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-9	True	NA	-8	True	AATAAA	-14	NA	19854843	19788414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442
transcript_91506.known	chr22	-	1076	8	FSM	ENSG00000185838.14	ENST00000405009.5	1076	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.9088550128947	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGCAGGCTTGAGGTG	NA	False	NA	-11	True	AATAAA	-11	NA	19854939	19788417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19788627_19802102_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
transcript_91508.known	chr22	-	1941	18	FSM	ENSG00000184470.21	ENST00000400521.7	1941	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	23.9987023870662	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-3	True	NA	-5	True	AATAAA	-19	NA	19941818	19875521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_91511.known	chr22	-	810	8	FSM	ENSG00000184470.21	ENST00000462843.2	810	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	32.9229155353371	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACTGTCCACCTCACCC	232	False	NA	NA	False	NA	NA	NA	19881154	19875691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19880855_19880946_19881035
transcript_91516.known	chr22	-	1129	7	FSM	ENSG00000184470.21	ENST00000462330.5	1129	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	13.9164171634321	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	17	False	NA	-5	True	AATAAA	-19	NA	19881369	19875521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_91523.nic	chr22	-	1079	7	NIC	ENSG00000184470.21	novel	1129	7	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	21.3593591248011	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-2	True	NA	-5	True	AATAAA	-19	NA	19881388	19875521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_91526.known	chr22	+	1405	6	FSM	ENSG00000093010.15	ENST00000676678.1	1405	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	71.370582175011	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	7710	False	NA	40	True	TATAAA	-34	NA	19941370	19969029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19941576_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_91527.known	chr22	+	1548	6	FSM	ENSG00000093010.15	ENST00000403710.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.1645586870954	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTTATATACTAATATC	-13	True	NA	-31	True	NA	NA	NA	19941772	19968958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19941898_19961198_19961290_19962232_19962816_19963565_19963760_19964167_19964300_19968535
transcript_91529.known	chr22	+	2272	6	FSM	ENSG00000093010.15	ENST00000361682.11	2272	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	59.4191888197744	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTCTCAGTGTTTTT	-14	True	NA	NA	False	NA	NA	NA	19941771	19969975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_91531.known	chr22	+	909	4	FSM	ENSG00000093010.15	ENST00000677675.1	909	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	79.9291352803636	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	516	False	NA	40	True	TATAAA	-34	NA	19963137	19969029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19963227_19963565_19963760_19964167_19964300_19968535
transcript_91532.known	chr22	-	850	7	FSM	ENSG00000184470.21	ENST00000485358.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	22.6034658109474	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCCCAGGCTCCTGGTGC	222	False	NA	NA	False	NA	NA	NA	19881164	19875640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881035
transcript_91533.known	chr22	+	1035	4	FSM	ENSG00000093010.15	ENST00000449653.5	1035	4	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	2.05480466765633	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATTAAGAATCTAAATA	14	True	NA	9	True	TATAAA	-3	NA	19962569	19968998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19962816_19963565_19963760_19964167_19964300_19968535
transcript_91545.known	chr22	+	4506	14	FSM	ENSG00000128191.16	ENST00000351989.8	4506	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	13.4714249409937	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	9	True	NA	14	True	CATAAA	-16	NA	20080240	20111872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089812_20089975_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
transcript_91547.known	chr22	-	2928	13	FSM	ENSG00000099899.15	ENST00000403707.7	2928	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	38.3905370284571	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	8937	False	NA	-10	True	AATAAA	-15	NA	20117392	20111874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882_20116973_20117096
transcript_91550.known	chr22	-	2886	12	FSM	ENSG00000099899.15	ENST00000252136.12	2886	12	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_9	33.4942945678072	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	-7	True	NA	-10	True	AATAAA	-15	NA	20117226	20111874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_91553.known	chr22	-	2473	12	FSM	ENSG00000099899.15	ENST00000439169.2	2473	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	63.7581950655485	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGAGGGCCAGAATA	-3	True	NA	NA	False	NA	NA	NA	20117222	20112337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113562_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_91557.known	chr22	+	1132	6	FSM	ENSG00000099901.17	ENST00000402752.5	1132	6	0	0	0	0	multi-exon	FALSE	canonical	3	3265	junction_5	1863.16869874953	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	5	False	NA	19	True	AATAAA	-21	NA	20117423	20127355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_91559.known	chr22	+	1221	6	FSM	ENSG00000099901.17	ENST00000430524.6	1221	6	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_1	3021.35320676018	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	0	True	NA	19	True	AATAAA	-21	NA	20116103	20127355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_91561.nic	chr22	+	903	6	NIC	ENSG00000099901.17	novel	1221	6	NA	NA	143	2	combination_of_known_junctions	FALSE	canonical	2	172	junction_1	3074.77268102863	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCAGGTTGTTTTTTTTT	93	False	NA	23	True	TATAAA	-14	NA	20116246	20127183	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_91571.known	chr22	+	837	6	FSM	ENSG00000099901.17	ENST00000331821.7	837	6	0	0	0	0	multi-exon	FALSE	canonical	3	3743	junction_5	1691.42964382205	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	22	True	NA	21	True	TATAAA	-12	NA	20117547	20127181	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_91575.nic	chr22	+	1073	6	NIC	ENSG00000099901.17	novel	333	3	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	230	junction_1	3001.86406087951	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	208	False	NA	19	True	AATAAA	-21	NA	20117733	20127355	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_20117913_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_91584.known	chr22	+	932	6	FSM	ENSG00000099901.17	ENST00000418705.2	932	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3130.82953863669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGAGAAGCAATAAATC	204	False	NA	-17	True	NA	NA	NA	20117952	20127035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20118314_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_91592.known	chr22	+	688	4	FSM	ENSG00000099901.17	ENST00000448394.2	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	2551.99560257371	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGATGGCAGGACTGTG	4506	False	NA	17	True	AATAAA	-19	NA	20122606	20127353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20122698_20125307_20125437_20126302_20126369_20126951
transcript_91597.known	chr22	-	1172	5	FSM	ENSG00000128185.10	ENST00000248879.8	1172	5	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	41.9702275428666	2756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTGGTAGGGCCCCCA	-20	True	NA	25	True	NA	NA	NA	20320060	20314237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20314825_20315335_20315477_20316118_20316220_20319638_20319800_20319878
transcript_916.nic	chr1	-	771	4	ISM	ENSG00000008128.23	ENST00000357760.6	2446	20	-367	16478	-334	-193	5prime_fragment	FALSE	canonical	3	64	junction_3	14.290634073484	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGCATCATAGCCATTC	NA	False	NA	19	True	AAAAAG	-36	NA	1724691	1719358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1719456_1721595_1721712_1722707_1722832_1724257
transcript_91609.nic	chr22	-	2539	7	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	12.8927197372091	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	20	False	NA	-7	True	AATAAA	-27	NA	20495838	20441518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489213_20495759
transcript_91610.known	chr22	-	2528	7	FSM	ENSG00000099910.17	ENST00000328879.9	2528	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	7.47774475805818	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	10	True	NA	-7	True	AATAAA	-27	NA	20495795	20441518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
transcript_91613.nnic	chr22	-	1397	4	NIC	ENSG00000099910.17	novel	2528	7	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	17.9876500843094	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	-4	True	NA	-7	True	AATAAA	-27	NA	20495809	20441518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_20442439_20446442_20446677_20457807_20458001_20495759
transcript_91614.nnic	chr22	+	473	4	NNC	ENSG00000099917.17	novel	590	6	NA	NA	0	-36345	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1.63299316185545	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGGATCACGAGGTCAGG	3	True	NA	NA	False	NA	NA	NA	20495912	20500838	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_20496037_20498666_20498792_20499240_20499367_20500740
transcript_91616.nnic	chr22	+	768	3	NNC	ENSG00000099917.17	novel	590	6	NA	NA	-2	-35927	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGGGAAACTTGCAAT	1	True	NA	NA	False	GATAAA	-17	NA	20495910	20501256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_20496037_20499240_20499367_20500740
transcript_91623.nic	chr22	+	1022	8	NIC	ENSG00000226287.9	novel	1961	8	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	27.4107084690548	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	17	True	AATAAA	-17	NA	20702265	20704606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_20702461_20702585_20702710_20703005_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_91625.known	chr22	+	663	7	FSM	ENSG00000226287.9	ENST00000419950.5	663	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.4207976325139	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	110	False	NA	17	True	AATAAA	-17	NA	20703051	20704606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20703123_20703467_20703525_20703632_20703693_20703818_20703884_20703967_20704041_20704187_20704229_20704310
transcript_91628.known	chr22	+	788	6	FSM	ENSG00000226287.9	ENST00000452055.5	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	15.8063278467834	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	-21	True	NA	17	True	AATAAA	-17	NA	20702920	20704606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_91633.known	chr22	+	466	5	FSM	ENSG00000226287.9	ENST00000414022.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	17.4122801493658	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCACGTGCCCGCCC	31	False	NA	NA	False	NA	NA	NA	20702972	20704254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187
transcript_91635.known	chr22	-	3925	10	FSM	ENSG00000241973.11	ENST00000492581.5	3925	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_9	35.3333333333333	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGAGGTTTTGTGTC	7302	False	NA	-2	True	AATAAA	-24	NA	20722009	20707692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20708099_20709295_20709380_20709907_20711462_20712485_20712612_20712692_20713391_20714457_20714529_20714627_20714701_20717707_20717779_20718692_20718823_20721297
transcript_91636.known	chr22	+	4259	5	FSM	ENSG00000099940.12	ENST00000215730.12	4259	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	17.2391270080593	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTAACCTCTTTTT	-1	True	NA	9	True	AATAAA	-19	NA	20859006	20891214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20859348_20870336_20870534_20881048_20881135_20883470_20883570_20887678
transcript_91639.known	chr22	+	684	2	FSM	ENSG00000237476.1	ENST00000444039.1	684	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGTATGTGTGGAG	-16	True	NA	9	True	AATAAA	-15	NA	20957091	20964679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20957487_20964390
transcript_91640.nic	chr22	+	711	3	ISM	ENSG00000183773.16	ENST00000483107.5	1325	11	3770	0	2589	0	3prime_fragment	FALSE	canonical	3	9	junction_1	3	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTATGACTCCCAGTG	6	False	NA	2	True	ATTAAA	-16	NA	20979461	20981356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_20979703_20980019_20980125_20980991
transcript_91643.known	chr22	+	1660	3	FSM	ENSG00000099949.21	ENST00000493460.2	1660	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	13	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCGGATCACCTGAGGT	-13	True	NA	NA	False	NA	NA	NA	20982296	20987162	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20982572_20983026_20983090_20985840
transcript_91644.known	chr22	-	395	1	FSM	ENSG00000272829.1	ENST00000610278.1	395	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGCAAATTTGTGCGTT	461	False	NA	-10	True	NA	NA	NA	20981755	20981360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20981400_20981800
transcript_91645.known	chr22	-	1144	5	FSM	ENSG00000184436.12	ENST00000399133.2	1144	5	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_4	67.8877750408717	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	NA	False	NA	-5	True	AATAAA	-13	NA	21002196	20999776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831_21001912_21002085
transcript_91646.known	chr22	-	2316	5	FSM	ENSG00000099960.13	ENST00000382932.3	2316	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.11803398874989	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGGCATTCTTTGT	2	True	NA	NA	False	NA	NA	NA	21032561	21028717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21029231_21029335_21029445_21029710_21030352_21030830_21031853_21032530
transcript_91650.nnic	chr22	-	1183	4	NNC	ENSG00000184436.12	novel	1144	5	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	105.325949108259	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	-4	True	NA	-5	True	AATAAA	-13	NA	21001775	20999776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_21000433_21000646_21000788_21001255_21001412_21001545
transcript_91652.known	chr22	-	1080	4	FSM	ENSG00000184436.12	ENST00000466670.1	1080	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	69.108610172684	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCACCAGAGCGGCAG	-6	True	NA	NA	False	NA	NA	NA	21002117	21000229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646_21001412_21001831_21001912_21002085
transcript_91653.known	chr22	-	1678	4	FSM	ENSG00000161149.12	ENST00000292748.7	1678	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTCCTACCGCCTTATA	-1	True	NA	NA	False	NA	NA	NA	21014292	21008636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21009454_21011383_21011591_21013041_21013185_21013781
transcript_91654.known	chr22	-	1957	3	FSM	ENSG00000184436.12	ENST00000498406.1	1957	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	8	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	29	True	NA	NA	False	NA	NA	NA	21001742	20999103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646_21000788_21001255
transcript_91656.known	chr22	-	1974	3	FSM	ENSG00000161149.12	ENST00000422086.5	1974	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGCTGAGATAGCTTTA	4	True	NA	NA	False	AAAAAG	-27	NA	21014287	21008192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21009454_21011383_21011591_21013781
transcript_91657.known	chr22	+	1263	2	FSM	ENSG00000230513.3	ENST00000429962.2	1269	2	0	6	0	5	multi-exon	FALSE	canonical	3	18	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGAATTGCTTCTATA	NA	False	NA	24	True	ATTAAA	-33	NA	21001921	21003272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21002830_21002917
transcript_91658.known	chr22	+	1020	1	FSM	ENSG00000230513.3	ENST00000662660.1	1020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTTTTAAGAATTG	2	True	NA	16	True	ATTAAA	-25	NA	21002244	21003264	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21002200_21003300
transcript_91659.known	chr22	-	1809	2	FSM	ENSG00000184436.12	ENST00000471073.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-24	True	NA	-1	True	AATAAA	-17	NA	21001795	20999772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646
transcript_91660.known	chr22	-	1671	3	FSM	ENSG00000184436.12	ENST00000476667.5	1671	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	51	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCATAATAAAGCGGATT	5	True	NA	-30	True	NA	NA	NA	21002106	20999801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646_21001412_21001831
transcript_91661.nnic	chr22	+	634	3	FSM	ENSG00000169668.12	ENST00000692296.1	665	3	26	5	-3	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTATAGAAGCCAGTTT	-7	True	NA	NA	False	AAAAAG	-24	NA	21103009	21116233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21103227_21106133_21106246_21115928
transcript_91662.known	chr22	+	6940	2	FSM	ENSG00000169635.10	ENST00000443632.2	6940	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTGGGACCTCCAT	NA	False	NA	24	True	ATTAAA	-15	NA	21442459	21451463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21442858_21444921
transcript_91666.nnic	chr22	-	813	2	NNC	ENSG00000183506.17	novel	209	2	NA	NA	-672	639	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTAGGGGCTGTAGCTGTT	NA	False	NA	NA	False	AAAAAG	-6	NA	21518205	21491336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_21492095_21518150
transcript_91672.known	chr22	+	2861	4	FSM	ENSG00000185651.15	ENST00000342192.9	2861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_1	195.254250202709	15721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	0	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21567772_21592860_21592957_21610856_21611044_21621514
transcript_91676.known	chr22	+	3451	4	FSM	ENSG00000185651.15	ENST00000496722.1	3451	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	1262.23250191432	9604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	16	False	NA	16	True	AATAAA	-18	NA	21567729	21624034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21568378_21592860_21592957_21610856_21611044_21621514
transcript_91677.known	chr22	+	2932	3	FSM	ENSG00000185651.15	ENST00000545681.2	2932	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1376	8890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	NA	False	NA	16	True	AATAAA	-18	NA	21567546	21624034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21567772_21610856_21611044_21621514
transcript_91682.nnic	chr22	-	1004	3	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	29.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-24	True	NA	0	True	AATAAA	-20	NA	21630055	21628088	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_21628788_21629307_21629408_21629850
transcript_91684.known	chr22	+	825	3	FSM	ENSG00000128228.5	ENST00000248958.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	64	639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTCACTGTGAGCCT	-18	True	NA	29	True	ATTAAA	-17	NA	21642301	21644299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21642524_21642861_21643059_21643893
transcript_91687.known	chr22	+	4115	21	FSM	ENSG00000100023.20	ENST00000681394.1	4115	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	62.4162639061327	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGATGAGGGCATCAGGT	-13	True	NA	6	True	ATTAAA	-20	NA	21666011	21697865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21685637_21685727_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
transcript_91689.known	chr22	+	4051	21	FSM	ENSG00000100023.20	ENST00000679795.1	4051	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_20	45.6317871664041	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGTATAAATTACAAAAAAA	-25	True	NA	NA	False	GATAAA	-9	NA	21665999	21698248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21695866
transcript_91690.known	chr22	+	4929	21	FSM	ENSG00000100023.20	ENST00000335025.12	4929	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_20	45.09819841191	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAATTTAGAGTGTATC	-16	True	NA	NA	False	AATAAA	-20	NA	21666008	21700015	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695497_21696746
transcript_91691.known	chr22	+	2625	21	FSM	ENSG00000100023.20	ENST00000626352.2	2625	21	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_19	59.5786035418757	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGATGAGGGCATCAGGTA	-3	True	NA	7	True	ATTAAA	-21	NA	21666021	21697866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695397_21695497_21696884
transcript_91692.known	chr22	+	4068	20	FSM	ENSG00000100023.20	ENST00000398831.8	4068	20	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_19	26.8978780738434	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATTTTCAATTCTAAT	-13	True	NA	23	True	ATTAAA	-15	NA	21666011	21697907	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
transcript_91707.known	chr22	-	465	4	FSM	ENSG00000100027.17	ENST00000672036.2	465	4	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_3	13.1993265821489	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGAACTTTCCCTTCTC	NA	False	NA	-87	True	NA	NA	NA	21710849	21701128	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21701219_21703369_21703479_21703838_21703883_21710627
transcript_91711.nic	chr22	+	455	2	ISM	ENSG00000100023.20	ENST00000484439.5	863	11	-36	14650	-7	-3381	5prime_fragment	FALSE	canonical	3	199	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATGTACATTTAAATGT	8229	False	NA	NA	False	AATAAA	-21	NA	21665992	21670228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_21666132_21669912
transcript_91712.known	chr22	+	3507	21	FSM	ENSG00000100023.20	ENST00000679534.1	3507	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	49.6327512838045	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGGCATCAGGTAAATTAA	-25	True	NA	-12	True	ATTAAA	-27	NA	21665999	21697872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393_21695493_21696030
transcript_91713.known	chr22	-	5881	9	FSM	ENSG00000100030.15	ENST00000215832.11	5881	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	78.9509341300025	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTTTATTTCACTAAA	-4	True	NA	-4	True	AGTAAA	-18	NA	21867645	21759656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21764241_21769194_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_91714.known	chr22	-	1487	8	FSM	ENSG00000100030.15	ENST00000398822.7	1487	8	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_3	68.942448640078	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATATATTCTCCTAGG	474	False	NA	-17	True	ATTAAA	-14	NA	21867680	21769039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_91719.known	chr22	-	2834	18	FSM	ENSG00000100038.20	ENST00000357179.10	2834	18	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_13	45.6548659181792	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-10	True	NA	NA	False	ATTAAA	-22	NA	21982787	21957024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_9172.known	chr1	+	918	3	FSM	ENSG00000274265.5	ENST00000667654.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	-2	True	NA	11	True	AATAAA	-34	NA	149175892	149251069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149176251_149177157_149177213_149250564
transcript_91722.known	chr22	-	5149	8	FSM	ENSG00000100034.14	ENST00000263212.10	5149	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	16.6034174008773	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCCGAGTCCTGC	0	True	NA	-12	True	AATAAA	-15	NA	21952848	21919424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21923472_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_91725.nic	chr22	-	1282	8	NIC	ENSG00000100034.14	novel	1778	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	56.3885934333155	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	NA	False	NA	NA	False	AATAAA	-26	NA	21952875	21924875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_21925029_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_91726.known	chr22	-	1778	7	FSM	ENSG00000100034.14	ENST00000397495.8	1778	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	15.5071668019088	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	17	True	NA	NA	False	AATAAA	-26	NA	21952831	21924875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_91729.known	chr22	-	159	2	FSM	ENSG00000100034.14	ENST00000497072.1	159	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGGGACAAGTTCTCTGG	-4	True	NA	NA	False	NA	NA	NA	21952821	21952019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21952149_21952791
transcript_9173.known	chr1	+	838	3	FSM	ENSG00000274265.5	ENST00000611769.4	838	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAACTCCATCTCAAAT	-3	True	NA	-45	True	NA	NA	NA	149176021	149251013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149176251_149190635_149190796_149250564
transcript_91731.known	chr22	-	348	3	FSM	ENSG00000100034.14	ENST00000484588.1	348	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	71	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	9433	False	NA	NA	False	AATAAA	-26	NA	21931248	21924875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21925029_21925568_21925663_21931147
transcript_91732.known	chr22	+	2256	3	FSM	ENSG00000224086.6	ENST00000653280.1	2256	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAACAAAAATAACTTAAAA	NA	False	NA	NA	False	NA	NA	NA	21938268	21943372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21939614_21941101_21941221_21942580
transcript_9175.known	chr1	+	608	3	FSM	ENSG00000274265.5	ENST00000664903.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	74	False	NA	8	True	AATAAA	-31	NA	149176550	149251066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149176602_149177157_149177213_149250564
transcript_91750.nnic	chr22	+	841	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5135	-3056	at_least_one_novel_splicesite	FALSE	canonical	3	318	junction_3	92.1764612034981	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTTGTGCTTTTCC	NA	False	NA	24	True	ATTAAA	-18	NA	22298088	22307345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105
transcript_91753.nic	chr22	+	798	5	ISM	ENSG00000286129.1	ENST00000652112.1	2895	14	-35	21777	-35	-21777	5prime_fragment	FALSE	canonical	3	232	junction_3	127.295915095497	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTTGTGCTTTTCC	NA	False	NA	24	True	ATTAAA	-18	NA	22298088	22307345	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105
transcript_91767.known	chr22	-	5309	4	FSM	ENSG00000275004.4	ENST00000626650.3	5309	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.05480466765633	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTGTATTGTTTT	32	True	NA	NA	False	AATAAA	-18	NA	22508742	22484420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_22489467_22494062_22494181_22507809_22507871_22508658
transcript_91772.known	chr22	-	2148	2	FSM	ENSG00000169548.3	ENST00000302097.3	2148	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTGTCTTTGGCTTTT	0	True	NA	NA	False	AATAAA	-15	NA	22520270	22513735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_22515702_22520088
transcript_91774.known	chr22	-	2196	6	FSM	ENSG00000185686.18	ENST00000398743.6	2196	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.35646599662505	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCTTGTAGTATAT	NA	False	NA	1	True	AATAAA	-19	NA	22559340	22547700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_22548644_22549725_22550335_22550766_22551090_22556811_22556931_22557544_22557581_22559174
transcript_91776.known	chr22	-	1188	7	FSM	ENSG00000100218.12	ENST00000216036.9	1188	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.5723301886761	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGGTCCGAATGGCACT	2	True	NA	0	True	AATAAA	-18	NA	23141990	23059414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23059719_23061808_23061946_23063901_23064134_23134025_23134145_23138839_23138943_23140221_23140473_23141948
transcript_9178.known	chr1	+	1006	2	FSM	ENSG00000274265.5	ENST00000668239.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGGCGTGATGGTATG	NA	False	NA	9	True	AATAAA	-32	NA	149175747	149251067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149176251_149250564
transcript_91780.nic	chr22	-	818	4	NIC	ENSG00000100218.12	novel	519	4	NA	NA	-87	5	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTTTATTTATAATAA	0	True	NA	NA	False	AATAAA	-23	NA	23142077	23135987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_23136323_23138839_23138943_23140221_23140473_23141948
transcript_91781.known	chr22	+	3170	3	FSM	ENSG00000128266.9	ENST00000615612.2	3170	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	6.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGCATTGTCCCAGTGT	-6	True	NA	29	True	AATAAA	-15	NA	23070518	23125032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23070571_23095246_23096419_23123086
transcript_91789.known	chr22	+	1077	4	FSM	ENSG00000280623.1	ENST00000626825.1	1077	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	11.5854314646552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAACAGTGATTTTAG	23	False	NA	NA	False	AATGAA	-1	NA	23536898	23547167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23537137_23538760_23538839_23544227_23544307_23546485
transcript_918.known	chr1	-	3098	12	FSM	ENSG00000008130.15	ENST00000341991.7	3098	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	169.055177065247	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	8627	False	NA	NA	False	AATAAA	-20	NA	1778790	1751231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
transcript_91806.known	chr22	+	976	2	FSM	ENSG00000280623.1	ENST00000629869.1	976	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAATCAAGTAGAAAGG	5	True	NA	19	True	NA	NA	NA	23536880	23539480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23537137_23538760
transcript_91809.known	chr22	+	3935	1	FSM	ENSG00000280623.1	ENST00000627127.1	3935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCTTTCTTTATACT	6848	False	NA	10	True	NA	NA	NA	23543862	23547797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23543900_23547800
transcript_9182.known	chr1	+	526	2	FSM	ENSG00000274265.5	ENST00000619653.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAGTTAGAAA	16	False	NA	NA	False	TTTAAA	-33	NA	149176040	149180611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149176251_149180295
transcript_9184.nnic	chr1	+	1552	4	Fusion	ENSG00000274265.5_ENSG00000272755.1	novel	1022	3	NA	NA	0	-5	multi-exon	FALSE	canonical	2	4	junction_3	5.31245915016974	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCCTGTTTTGGTGATA	-5	True	NA	5	True	AATAAA	-16	NA	149175889	149264811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_149176251_149259501_149259610_149262167_149262277_149263837
transcript_91844.known	chr22	-	696	4	FSM	ENSG00000228315.12	ENST00000430357.4	696	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	5.35412613473634	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	NA	False	NA	1	True	AATAAA	-20	NA	23652886	23638486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23638943_23640307_23640424_23652478_23652577_23652860
transcript_91851.nnic	chr22	-	865	3	NNC	ENSG00000228315.12	novel	3816	5	NA	NA	12494	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	9767	False	NA	1	True	AATAAA	-20	NA	23674420	23638486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_23638943_23659864_23660001_23674147
transcript_91859.known	chr22	-	3350	12	FSM	ENSG00000228315.12	ENST00000445682.2	3350	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.8469042206033	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-10	True	NA	1	True	AATAAA	-20	NA	23717356	23638486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23638943_23659864_23660001_23683724_23683868_23690235_23690357_23694118_23695518_23700725_23700846_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_91860.known	chr22	-	3041	12	FSM	ENSG00000228315.12	ENST00000421064.5	3041	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.1547270670714	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCCTTGACCTCTTC	-1	True	NA	-5	True	NA	NA	NA	23717347	23653168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23653353_23659864_23660001_23683724_23683868_23686830_23686996_23690231_23690357_23694118_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717107
transcript_91863.known	chr22	-	567	2	FSM	ENSG00000128218.8	ENST00000248948.4	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGTGAGGGTCATAAG	-22	True	NA	-17	True	NA	NA	NA	23754425	23752742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23753199_23754314
transcript_91868.known	chr22	+	681	6	FSM	ENSG00000169314.15	ENST00000305199.9	681	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.06939798987516	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	NA	False	NA	6	True	AATAAA	-13	NA	23763206	23765861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23763332_23764086_23764174_23764259_23764403_23764638_23764714_23764792_23764903_23765720
transcript_91869.known	chr22	+	646	6	FSM	ENSG00000169314.15	ENST00000382821.3	646	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	4.22374241638857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	NA	False	NA	6	True	AATAAA	-13	NA	23763222	23765861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23763332_23764086_23764174_23764259_23764413_23764638_23764714_23765376_23765458_23765720
transcript_9187.known	chr1	+	565	1	FSM	ENSG00000272755.1	ENST00000610119.1	565	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTTGGTGATATTCTG	NA	False	NA	10	True	AATAAA	-21	NA	149264251	149264816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149264300_149264800
transcript_91879.known	chr22	-	691	4	FSM	ENSG00000250479.9	ENST00000401675.7	691	4	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_2	269.579095793589	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	7	True	NA	-3	True	ATTAAA	-19	NA	23767942	23765833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23766027_23766127_23766297_23767373_23767594_23767833
transcript_91880.known	chr22	-	700	4	FSM	ENSG00000250479.9	ENST00000484558.3	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_3	46.5212018570267	4120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	-23	True	NA	-3	True	ATTAAA	-19	NA	23767972	23765833	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23766027_23766127_23766276_23767373_23767594_23767833
transcript_91881.known	chr22	+	1730	9	FSM	ENSG00000099956.20	ENST00000407422.8	1730	9	0	0	0	0	multi-exon	TRUE	canonical	3	1419	junction_5	182.281333040441	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTAACATAAAAATAATG	NA	False	NA	53	True	NA	NA	NA	23786930	23834540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_91882.known	chr22	+	5191	9	FSM	ENSG00000099956.20	ENST00000644036.2	5191	9	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	502.716853084318	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGTCCCACGAAATCTG	-17	True	NA	NA	False	AATAAA	-20	NA	23786965	23838009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_91885.known	chr22	-	1063	7	FSM	ENSG00000099958.15	ENST00000406855.7	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	21.4786715914493	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-6	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_91886.nnic	chr22	-	1249	7	NNC	ENSG00000099958.15	novel	3093	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	43.1431724996358	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	5218	False	NA	-5	True	AAGAAA	-29	NA	23839145	23834502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_23834980_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_91889.known	chr22	-	3093	7	FSM	ENSG00000099958.15	ENST00000318109.12	3093	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	25.0044440494529	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-6	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_91891.nic	chr22	-	1266	6	ISM	ENSG00000099958.15	ENST00000406855.7	1063	7	-85	0	37	0	intron_retention	FALSE	canonical	3	68	junction_1	23.5082964078642	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	15	True	NA	-5	True	AAGAAA	-29	NA	23839091	23834502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710
transcript_9190.known	chr1	+	1850	5	FSM	ENSG00000286219.2	ENST00000652191.1	1850	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	17.9356488591854	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTAATTTGTTCATTTCA	12	False	NA	NA	False	ATTAAA	-32	NA	149390632	149464958	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149390923_149430933_149431016_149455317_149455578_149463490_149463827_149464076
transcript_91902.nic	chr22	-	1003	6	ISM	ENSG00000099958.15	ENST00000318109.12	3093	7	-23	2231	-17	0	intron_retention	FALSE	canonical	3	58	junction_1	27.3320324893704	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-1	True	NA	-30	True	AATAAA	-15	NA	23839029	23836733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710
transcript_91911.known	chr22	-	969	6	FSM	ENSG00000099958.15	ENST00000476077.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	8.22192191643779	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-12	True	NA	-30	True	AATAAA	-15	NA	23839012	23836733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_91927.known	chr22	+	1048	8	FSM	ENSG00000133460.20	ENST00000405286.6	1048	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.67217764560615	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATGGTGTTAAAATGC	0	True	NA	24	True	ATTAAA	-15	NA	23856950	23882951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23882458_23882647_23882758
transcript_91943.known	chr22	+	887	4	FSM	ENSG00000133460.20	ENST00000473740.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8.80656320908194	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGACTGCTCGTGGGA	31	False	NA	NA	False	NA	NA	NA	23856999	23875211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23857532_23862103_23862203_23868480_23868642_23875116
transcript_91958.known	chr22	-	613	1	FSM	ENSG00000272973.1	ENST00000609825.1	613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTGAATTCTTGGGG	618	False	NA	-3	True	AATAAA	-16	NA	23857039	23856426	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23856400_23857000
transcript_91959.known	chr22	+	557	3	FSM	ENSG00000240972.2	ENST00000215754.8	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	21305	junction_2	1533.5	44952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	-22	True	NA	20	True	AATAAA	-15	NA	23894382	23895223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23894583_23894771_23894945_23895039
transcript_91960.known	chr22	+	435	2	FSM	ENSG00000240972.2	ENST00000498385.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	21305	junction_1	0	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	235	False	NA	24	True	AATAAA	-19	NA	23894697	23895227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23894945_23895039
transcript_91961.known	chr22	+	589	2	FSM	ENSG00000240972.2	ENST00000465752.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	24372	junction_1	0	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	9	False	NA	24	True	AATAAA	-19	NA	23894449	23895227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23894583_23894771
transcript_91966.nnic	chr22	-	1372	7	NNC	ENSG00000133433.11	novel	1108	5	NA	NA	-47	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.7800177390629	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	9543	False	NA	NA	False	AATAAA	-26	NA	23961242	23957413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_23957933_23958284_23958459_23958550_23958702_23958850_23958964_23960293_23960382_23960690_23960795_23961019
transcript_91970.nnic	chr22	-	1283	7	NNC	ENSG00000133433.11	novel	819	5	NA	NA	-3	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.83176086632785	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCAAGAGTTATTGGTTT	9587	False	NA	NA	False	AATAAA	-23	NA	23961198	23957416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_23957933_23958326_23958459_23958550_23958702_23958850_23958964_23960293_23960382_23960690_23960795_23961019
transcript_91977.nnic	chr22	-	1226	6	NNC	ENSG00000133433.11	novel	1108	5	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.9452333538155	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	9554	False	NA	NA	False	AATAAA	-26	NA	23961231	23957413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_23957933_23958284_23958459_23958550_23958702_23960315_23960382_23960690_23960795_23961019
transcript_91978.nnic	chr22	-	1620	6	NNC	ENSG00000133433.11	novel	1108	5	NA	NA	-146	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	13.0935098426663	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	9444	False	NA	NA	False	AATAAA	-26	NA	23961341	23957413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_23957933_23958284_23958459_23958550_23958964_23960293_23960382_23960690_23960795_23961019
transcript_91982.known	chr22	-	1108	5	FSM	ENSG00000133433.11	ENST00000290765.9	1108	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	16.2864974749023	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	9590	False	NA	NA	False	AATAAA	-26	NA	23961195	23957413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23957933_23958284_23958459_23958550_23958702_23960293_23960382_23961019
transcript_91986.known	chr22	-	819	5	FSM	ENSG00000133433.11	ENST00000404172.3	819	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	10.4163333279998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAAGCTCTGCACAGA	9632	False	NA	NA	False	NA	NA	NA	23961153	23957618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23957933_23958326_23958459_23958550_23958702_23960293_23960382_23961019
transcript_91989.nnic	chr22	+	550	4	Fusion	ENSG00000231271.1_ENSG00000228039.3	novel	289	3	NA	NA	-3	9	multi-exon	FALSE	non_canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACCTGCCTCCAGTA	NA	False	NA	NA	False	NA	NA	NA	23949914	23964383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_+_23950006_23953886_23954041_23963751_23963943_23964269
transcript_91993.known	chr22	+	937	5	FSM	ENSG00000099984.11	ENST00000402588.6	937	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2.12132034355964	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGAAGCTCTGCACAGA	6506	False	NA	NA	False	NA	NA	NA	23980057	23983710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23980310_23980947_23981036_23982627_23982779_23982870_23983003_23983396
transcript_92007.known	chr22	-	699	5	FSM	ENSG00000224205.2	ENST00000437021.2	699	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTGTCCCACACTTGCT	NA	False	NA	NA	False	NA	NA	NA	23991421	23976871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23977068_23977400_23977578_23987318_23987470_23989126_23989216_23991335
transcript_92008.known	chr22	+	1582	3	FSM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	248	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGATGCAATTATCAAT	-8	True	NA	NA	False	AATAAA	-18	NA	23966887	23972556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23967023_23967385_23967562_23971285
transcript_92009.known	chr22	-	333	2	FSM	ENSG00000099977.15	ENST00000428792.1	333	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	6751	False	NA	-18	True	AATAAA	-24	NA	23973183	23971369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23971624_23973104
transcript_92010.known	chr22	-	565	3	FSM	ENSG00000099977.15	ENST00000398344.9	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	53	10168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	5493	False	NA	-18	True	AATAAA	-24	NA	23974441	23971369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23971624_23973767_23973944_23974306
transcript_92011.known	chr22	-	805	5	FSM	ENSG00000285762.1	ENST00000404092.5	805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	336.592854944962	1002	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCAAACATGACTTCTTA	NA	False	NA	-26	True	AATAAA	-16	NA	23980469	23971377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23971624_23973767_23973944_23974306_23974440_23976875_23977068_23980411
transcript_92012.known	chr22	-	573	3	FSM	ENSG00000099977.15	ENST00000430101.2	573	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	307.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATATTCTTGAGCCA	5475	False	NA	NA	False	NA	NA	NA	23974459	23973103	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23973348_23973767_23973944_23974306
transcript_92013.known	chr22	-	1048	2	FSM	ENSG00000099977.15	ENST00000444947.2	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCTAGGAGGAAGTAA	5443	False	NA	NA	False	NA	NA	NA	23974491	23973080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23973944_23974306
transcript_92015.nic	chr22	-	841	3	ISM	ENSG00000276950.6	ENST00000621179.6	964	5	3954	0	3862	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTGCTGAGCAGCAGACA	3949	False	NA	NA	False	AATAAA	-19	NA	24001499	23998400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_23998740_24000074_24000252_24001174
transcript_92016.nnic	chr22	-	680	2	NIC	ENSG00000276950.6	novel	964	5	NA	NA	3841	-5	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGCTGCTGAGCAGC	3928	False	NA	NA	False	AATAAA	-14	NA	24001520	23998405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_23998740_24001174
transcript_92021.nic	chr22	+	1384	10	ISM	ENSG00000099991.18	ENST00000263119.10	7233	37	-40	122324	-40	0	5prime_fragment	FALSE	canonical	3	16	junction_1	10.2932316249053	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	1587	False	NA	NA	False	NA	NA	NA	24011263	24056304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_92022.nic	chr22	+	1652	10	ISM	ENSG00000099991.18	ENST00000398319.6	7480	37	-61	122324	9	0	5prime_fragment	FALSE	canonical	3	18	junction_4	9.41629792788369	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	6	True	NA	NA	False	NA	NA	NA	24011356	24056304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_92024.known	chr22	+	1321	9	FSM	ENSG00000099991.18	ENST00000454754.5	1321	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	12.3129758791285	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	1515	False	NA	NA	False	NA	NA	NA	24011191	24056304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_92026.known	chr22	+	1472	9	FSM	ENSG00000099991.18	ENST00000445422.5	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	11.5	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACTTCCAGGAGCTTC	-13	True	NA	NA	False	AAAAAG	-8	NA	24011415	24056318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_92031.known	chr22	+	3172	15	FSM	ENSG00000099994.11	ENST00000358321.4	3172	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_13	3.63444406663101	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTCCTGGTGTTCAT	0	True	NA	12	True	AAAACA	-18	NA	24181486	24189106	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24181596_24183056_24183268_24183494_24183647_24184135_24184304_24184765_24184941_24185093_24185296_24185485_24185572_24185660_24185930_24186015_24186160_24186256_24186416_24187201_24187451_24187570_24187844_24187958_24188136_24188224_24188328_24188411
transcript_92039.known	chr22	+	2565	7	FSM	ENSG00000100014.20	ENST00000421374.5	2565	7	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	30.2145108626082	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTGGAGGAAATAA	-30	True	NA	NA	False	AAGAAA	-17	NA	24270821	24330401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24270984_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255
transcript_92040.known	chr22	+	6204	20	FSM	ENSG00000258555.6	ENST00000358654.2	6204	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	112.970885862826	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	46	True	NA	29	True	AATAAA	-36	NA	24270897	24442356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24270984_24276699_24276804_24302194_24302385_24313312_24313467_24321287_24322919_24324219_24324428_24328845_24328920_24330255_24330432_24334409_24334574_24338385_24338478_24343481_24343604_24347085_24347177_24363260_24363345_24365475_24365633_24369217_24369321_24411587_24411705_24412647_24412708_24414533_24414745_24433130_24433737_24440582
transcript_92042.known	chr22	+	2412	3	FSM	ENSG00000128271.22	ENST00000611543.4	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCGTCTGAGTTCGT	5990	False	NA	29	True	AATAAA	-36	NA	24423596	24442356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24423629_24433130_24433737_24440582
transcript_92044.known	chr22	-	1606	6	FSM	ENSG00000138867.17	ENST00000404664.7	1606	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	67.5822461893654	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGAGCCCTGGCCG	-4	True	NA	NA	False	NA	NA	NA	24555935	24542397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24555614
transcript_92048.known	chr22	+	2630	16	FSM	ENSG00000100031.19	ENST00000400382.6	2630	16	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	24.9849732617205	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCTCTGGGCCTCA	-9	True	NA	25	True	AATAAA	-44	NA	24603192	24628996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24603528_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_9205.nnic	chr1	+	795	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	-119	-3	intron_retention	FALSE	canonical	3	12	junction_2	18	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	-5	True	NA	14	True	AATAAA	-28	NA	149607187	149647621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_149607555_149646598_149646786_149647380
transcript_9206.known	chr1	+	737	3	FSM	ENSG00000277147.7	ENST00000621156.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	3	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	67	False	NA	17	True	AATAAA	-31	NA	149607408	149647624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149607555_149646598_149646946_149647380
transcript_9207.nic	chr1	+	1072	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	-119	-5	intron_retention	FALSE	canonical	3	39	junction_2	4.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTGGTTCTATTAT	-5	True	NA	12	True	AATAAA	-26	NA	149607187	149647619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_149607555_149646598_149647065_149647380
transcript_92071.known	chr22	+	3466	4	FSM	ENSG00000100028.12	ENST00000215829.8	3466	4	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	39.1606378338703	7475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTCATAGTGATCA	2	True	NA	18	True	ATTAAA	-14	NA	24555998	24574971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915
transcript_92072.known	chr22	+	811	7	FSM	ENSG00000100031.19	ENST00000452551.5	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	20.8945766488181	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCATGCGGCAGACTT	11	True	NA	NA	False	NA	NA	NA	24603212	24615127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24603322_24607953_24608024_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040
transcript_92081.known	chr22	-	597	2	FSM	ENSG00000282012.1	ENST00000633827.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	16	True	NA	-1	True	AATAAA	-22	NA	24696003	24691121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_24691562_24695846
transcript_92082.nnic	chr22	-	680	2	Antisense	novelGene_ENSG00000237601.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACAGAACTTACTGACTA	NA	False	NA	NA	False	AATAAA	-32	NA	24707598	24700924	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr22_-_24701298_24707291
transcript_92084.known	chr22	+	344	4	FSM	ENSG00000167037.19	ENST00000470591.1	344	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.3137084989848	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTGGAGTGCCTTCAG	21	False	NA	12	True	ATTAAA	-17	NA	24806306	24814192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24806345_24806440_24806485_24813677_24813756_24814008
transcript_92089.known	chr22	+	1019	6	FSM	ENSG00000244752.3	ENST00000651629.1	1019	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.51361950083609	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGGTCTTTGATCT	NA	False	NA	NA	False	AATAAA	-19	NA	25212563	25231870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25212841_25221403_25221484_25224917_25225037_25227852_25227986_25229435_25229579_25231603
transcript_92090.known	chr22	+	1280	2	FSM	ENSG00000236641.2	ENST00000454253.2	1280	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTCTTAGCGTCTGCT	NA	False	NA	5	True	AATAAA	-17	NA	25212084	25213826	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25212841_25213302
transcript_92094.nnic	chr22	-	950	4	NNC	ENSG00000233577.6	novel	426	3	NA	NA	-435	-862	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.46337971105226	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTGTTTATTTTGCTTC	NA	False	NA	NA	False	AATAAA	-13	NA	25283109	25280390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_25280823_25281256_25281386_25282030_25282292_25282981
transcript_92097.nnic	chr22	-	895	4	NNC	ENSG00000233577.6	novel	426	3	NA	NA	-435	840	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.46337971105226	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGCATTTTGCCTG	NA	False	NA	NA	False	NA	NA	NA	25283109	25280445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_25280823_25281256_25281386_25282030_25282292_25282981
transcript_92100.nnic	chr22	-	823	3	NNC	ENSG00000233577.6	novel	428	2	NA	NA	-435	-860	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	4.5	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTATTTTGCTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	25283109	25280388	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_25280823_25282030_25282292_25282981
transcript_92114.nnic	chr22	+	1086	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	-33	-445	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	61.9883860089937	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCATTCATTCTTCAA	NA	False	NA	31	True	AATAAA	-42	NA	25448046	25461223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_92115.nnic	chr22	+	1541	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	61.9883860089937	308	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	NA	False	NA	49	True	AATAAA	-24	NA	25448046	25461678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_92117.nnic	chr22	+	902	6	NNC	ENSG00000100058.13	novel	977	6	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_5	78.2805212041923	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGTTTGACTTTTCA	NA	False	NA	2	True	ATTAAA	-17	NA	25448046	25520854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25520681
transcript_92125.known	chr22	+	1364	5	FSM	ENSG00000100058.13	ENST00000382734.10	1389	5	25	0	6	0	multi-exon	FALSE	canonical	3	153	junction_1	31.6889176211495	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	-10	True	NA	49	True	AATAAA	-24	NA	25448104	25461678	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_92128.nnic	chr22	+	774	5	FSM	ENSG00000100058.13	ENST00000686640.1	745	5	-31	2	-24	0	multi-exon	FALSE	canonical	3	29	junction_4	77.9466965303854	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGTTTGACTTTTCA	1	True	NA	2	True	ATTAAA	-17	NA	25448055	25520854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25520681
transcript_92134.nnic	chr22	+	818	4	NIC	ENSG00000100058.13	novel	1389	5	NA	NA	-13	-445	combination_of_known_splicesites	FALSE	canonical	3	34	junction_1	83.475878085961	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCATTCATTCTTCAA	12	False	NA	31	True	AATAAA	-42	NA	25448066	25461223	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_25448285_25457258_25457402_25459415_25459516_25460866
transcript_92139.known	chr22	+	538	3	ISM	ENSG00000100058.13	ENST00000415709.6	724	4	7613	0	-6	0	3prime_fragment	FALSE	canonical	3	200	junction_1	17.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGGGTCTTTGATC	7533	False	NA	NA	False	AATGAA	-18	NA	25455711	25459681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_25455841_25457258_25457402_25459415
transcript_92143.nnic	chr22	+	2149	3	Genic_Genomic	ENSG00000213707.2	novel	563	1	NA	NA	-138509	536	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTGCATGTGAAGCACT	NA	False	NA	NA	False	AGTAAA	-26	NA	26422016	26561624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr22_+_26422211_26422539_26423256_26560385
transcript_92149.known	chr22	-	5066	14	FSM	ENSG00000100099.21	ENST00000398145.7	5066	14	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_13	28.2379994933178	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAACTGACTCACAG	10	True	NA	NA	False	AATAAA	-35	NA	26483783	26450881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_92155.nic	chr22	-	1916	9	ISM	ENSG00000100099.21	ENST00000398145.7	5066	14	-41	14763	4	-124	5prime_fragment	FALSE	canonical	3	60	junction_8	28.8939331867435	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGTTGGATGCATCACG	28	False	NA	NA	False	NA	NA	NA	26483824	26465644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_92168.nic	chr22	-	1305	4	ISM	ENSG00000100099.21	ENST00000398145.7	5066	14	-41	25711	4	398	5prime_fragment	FALSE	canonical	3	60	junction_3	45.4386032649185	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	28	False	NA	NA	False	ATTAAA	-11	NA	26483824	26476592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483673
transcript_9217.known	chr1	+	1260	2	FSM	ENSG00000277147.7	ENST00000620190.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	114	False	NA	3	True	AATAAA	-17	NA	149607306	149647610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149607555_149646598
transcript_92170.nic	chr22	-	1239	4	ISM	ENSG00000100099.21	ENST00000422379.2	1942	12	-66	12354	-12	398	5prime_fragment	FALSE	canonical	3	76	junction_3	37.9326889224701	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	3	True	NA	NA	False	ATTAAA	-11	NA	26483849	26476592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483764
transcript_92171.nic	chr22	-	1214	3	NIC	ENSG00000100099.21	novel	5066	14	NA	NA	4	398	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	26	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	28	False	NA	NA	False	ATTAAA	-11	NA	26483824	26476592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26477137_26481721_26482241_26483673
transcript_92173.known	chr22	-	737	3	FSM	ENSG00000100099.21	ENST00000483631.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	34	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGAATGGCAGAATCAG	16	False	NA	NA	False	CATAAA	-25	NA	26483836	26476990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26477137_26481721_26482241_26483764
transcript_92174.known	chr22	-	486	2	FSM	ENSG00000100099.21	ENST00000491142.1	486	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGGTGTGCCCCTTT	NA	False	NA	0	True	AGTAAA	-15	NA	26452892	26451479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26451822_26452748
transcript_92175.known	chr22	-	3786	14	FSM	ENSG00000100099.21	ENST00000336873.9	3786	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_13	25.3624611950383	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-2	True	NA	-20	True	AATAAA	-36	NA	26483795	26452082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_92176.known	chr22	-	2896	16	FSM	ENSG00000100109.17	ENST00000405938.5	2896	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	50.0309237705375	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCCCTAAGAGGGAT	-30	True	NA	-60	True	NA	NA	NA	26512499	26491985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511196_26512098_26512176_26512393
transcript_92178.known	chr22	-	3539	15	FSM	ENSG00000100109.17	ENST00000407690.6	3539	15	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_10	17.3193297697535	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGCATTAAAGAGTCAT	-4	True	NA	NA	False	AATAAA	-21	NA	26512473	26491239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098_26512176_26512393
transcript_92180.known	chr22	-	923	2	FSM	ENSG00000100109.17	ENST00000492137.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	9325	False	NA	-1	True	AATAAA	-26	NA	26494619	26491926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26492369_26494138
transcript_92181.known	chr22	-	2974	14	FSM	ENSG00000100109.17	ENST00000407431.5	2974	14	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	17.6051364210098	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	92	False	NA	-1	True	AATAAA	-26	NA	26512377	26491926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098
transcript_92182.known	chr22	+	981	2	FSM	ENSG00000261188.2	ENST00000565764.2	1663	2	26	656	8	-656	multi-exon	FALSE	canonical	3	40	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAGAAGGGACCTTT	16	True	NA	NA	False	NA	NA	NA	26512554	26513912	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26513035_26513411
transcript_92183.known	chr22	+	2032	1	FSM	ENSG00000261188.2	ENST00000566814.1	2032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGACTTTGCTACTTCTT	-2	True	NA	22	True	AGTAAA	-18	NA	26512536	26514568	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26512500_26514600
transcript_92187.known	chr22	-	5653	7	FSM	ENSG00000128294.16	ENST00000338754.9	5653	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_6	38.1910402523361	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCTTCTCATCAGGAT	-21	True	NA	-12	True	AATAAA	-18	NA	26590132	26521995	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
transcript_9219.nnic	chr1	+	533	2	ISM	ENSG00000277147.7	ENST00000691376.1	606	3	40249	3	-105	-3	3prime_fragment	FALSE	canonical	3	12	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	9734	False	NA	14	True	AATAAA	-28	NA	149646493	149647621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_149646786_149647380
transcript_92191.nnic	chr22	-	977	6	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	151.938671838344	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-25	True	NA	16	True	AATAAA	-43	NA	26590136	26525745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26544603_26544676_26590052
transcript_92192.nnic	chr22	-	905	5	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-4	0	combination_of_known_splicesites	TRUE	canonical	1	4	junction_4	169.539081040331	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-25	True	NA	16	True	AATAAA	-43	NA	26590136	26525745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26590052
transcript_92194.nnic	chr22	-	703	4	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	181.73056980046	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-22	True	NA	16	True	AATAAA	-43	NA	26590133	26525745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26590052
transcript_92198.nnic	chr22	-	678	2	NNC	ENSG00000128294.16	novel	5653	7	NA	NA	0	-47107	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTTAAAAATCTCATG	-21	True	NA	NA	False	AATATA	-16	NA	26590132	26588596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_26589195_26590052
transcript_922.nic	chr1	-	2082	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	160.58555043423	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAAACTTCTGCAGGG	9053	False	NA	39	True	NA	NA	NA	1780172	1752470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_92200.nnic	chr22	-	1306	6	NNC	ENSG00000100122.7	novel	1041	6	NA	NA	936	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	8.67179335547152	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	6903	False	NA	-1	True	AATAAA	-22	NA	26617091	26599277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26616775
transcript_92201.known	chr22	-	1041	6	FSM	ENSG00000100122.7	ENST00000647684.1	1041	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	9.01997782702375	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	0	True	NA	-1	True	AATAAA	-22	NA	26618027	26599277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26617976
transcript_9221.known	chr1	+	554	2	ISM	ENSG00000277147.7	ENST00000610297.2	885	3	40505	5	151	-5	3prime_fragment	FALSE	canonical	3	39	junction_1	0	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTGGTTCTATTAT	9990	False	NA	12	True	AATAAA	-26	NA	149646749	149647619	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_149647065_149647380
transcript_92214.nic	chr22	-	821	4	NIC	ENSG00000100122.7	novel	1041	6	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	12.0830459735946	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	9727	False	NA	-1	True	AATAAA	-22	NA	26608367	26599277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26599674_26601878_26602022_26607888_26608022_26608218
transcript_92215.nic	chr22	-	705	4	NIC	ENSG00000100122.7	novel	1041	6	NA	NA	-38	-116	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	12.0830459735946	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCTGGATCTGTAAAC	9727	False	NA	-11	True	AATAAA	-18	NA	26608367	26599393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26599674_26601878_26602022_26607888_26608022_26608218
transcript_92216.known	chr22	+	809	6	FSM	ENSG00000196431.4	ENST00000354760.4	809	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	0.748331477354788	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTGCTTTTCAATTT	2	True	NA	6	True	AATAAA	-18	NA	26621962	26630669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26621987_26622584_26622636_26623233_26623353_26625480_26625623_26628287_26628431_26630339
transcript_92218.nnic	chr22	+	458	2	NNC	ENSG00000196431.4	novel	809	6	NA	NA	6984	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTGTGCTTTTCAAT	-7	True	NA	4	True	AATAAA	-16	NA	26628966	26630667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_26629097_26630339
transcript_9222.known	chr1	-	469	1	FSM	ENSG00000183598.4	ENST00000331491.2	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTTTTCATCAAGAGCAG	-1	True	NA	NA	False	NA	NA	NA	149813693	149813224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149813200_149813700
transcript_9223.known	chr1	+	942	2	FSM	ENSG00000270882.3	ENST00000614272.1	942	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	13	False	NA	NA	False	AATAAA	-20	NA	149832669	149834631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149833115_149834134
transcript_92230.known	chr22	+	682	4	FSM	ENSG00000244625.7	ENST00000651474.1	682	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.90668171555645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTCGGAGGTTGACAT	-24	True	NA	NA	False	ATTAAA	-19	NA	26672746	26719282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26672988_26717252_26717460_26718139_26718232_26719140
transcript_92235.nnic	chr22	+	983	3	Fusion	ENSG00000225783.9_ENSG00000244625.7	novel	706	3	NA	NA	-12	0	multi-exon	FALSE	canonical	3	6	junction_2	4	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGGTTCACTC	1760	False	NA	5	True	AATAAA	-17	NA	26672734	26722172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_+_26672988_26717252_26717460_26721649
transcript_92236.nnic	chr22	+	627	3	NNC	ENSG00000244625.7	novel	592	3	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	6.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGGTTCACTC	1760	False	NA	5	True	AATAAA	-17	NA	26672734	26722172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_26672988_26717252_26717460_26722005
transcript_92240.known	chr22	+	9943	4	FSM	ENSG00000225783.9	ENST00000616213.4	9943	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	2.86744175568088	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	2	True	NA	15	True	ATTAAA	-17	NA	26657519	26676475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26657655_26663315_26663399_26665530_26666938_26668157
transcript_92241.known	chr22	+	1236	3	FSM	ENSG00000225783.9	ENST00000436238.6	1236	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTCCGTTCAGCTGCT	9988	False	NA	NA	False	NA	NA	NA	26657220	26666549	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26657355_26663315_26663399_26665530
transcript_92244.known	chr22	+	509	3	FSM	ENSG00000235271.6	ENST00000447149.5	509	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCAAGAATATGGAGGG	NA	False	NA	NA	False	NA	NA	NA	26903291	26908113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26903432_26906577_26906768_26907934
transcript_92246.known	chr22	+	5052	2	FSM	ENSG00000226741.2	ENST00000426467.1	5052	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTGTGGTGCTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	27310650	27317456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27315050_27316803
transcript_9225.known	chr1	+	1547	2	FSM	ENSG00000270882.3	ENST00000618193.1	1547	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATCTGCTGAGAAATGT	11	False	NA	NA	False	AATAAA	-28	NA	149832667	149834484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149833865_149834134
transcript_9226.known	chr1	-	549	1	FSM	ENSG00000288825.1	ENST00000369159.3	533	1	14	-30	14	30	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	7567	False	NA	NA	False	AATAAA	-17	NA	149842736	149842187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149842200_149842700
transcript_92264.nnic	chr22	-	1509	4	NNC	ENSG00000227838.1	novel	819	5	NA	NA	-29791	799	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	0.942809041582063	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGCGTGGAAAGGTCTT	6018	False	NA	-35	True	ATTAAA	-17	NA	27744761	27675759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_27676208_27676409_27676888_27677333_27677526_27744370
transcript_9227.known	chr1	+	3612	1	FSM	ENSG00000220323.4	ENST00000608318.2	3612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTCTTTGATTACAAT	718	False	NA	14	True	AATAAA	-23	NA	149842874	149846486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149842900_149846500
transcript_92278.known	chr22	-	1017	12	FSM	ENSG00000180957.19	ENST00000634017.1	1017	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	300.319251618277	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGATGTGTGCTTGT	938	False	NA	NA	False	NA	NA	NA	27919199	27853578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919101
transcript_9228.known	chr1	+	564	1	FSM	ENSG00000288859.1	ENST00000607355.3	534	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	307	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	0	True	NA	NA	False	AATAAA	-17	NA	149851060	149851624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149851100_149851600
transcript_92280.known	chr22	+	4146	6	FSM	ENSG00000235954.8	ENST00000659843.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	5.65685424949238	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATCTAGCGAAAGCAGAAA	-43	True	NA	-35	True	TTTAAA	-15	NA	27919422	28002641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27997985_27998153_27998603_27998839_27999429
transcript_92283.known	chr22	+	1141	5	FSM	ENSG00000235954.8	ENST00000662424.1	1141	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	55.7875434124859	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	33	True	NA	NA	False	ATTAAA	-21	NA	27919498	27986392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27940019_27940172_27985691
transcript_92287.known	chr22	+	807	4	FSM	ENSG00000235954.8	ENST00000425112.2	1022	4	52	163	19	53	multi-exon	FALSE	canonical	3	10	junction_2	58.6912827144429	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGATAAGTGTCTGGC	52	False	NA	NA	False	NA	NA	NA	27919517	27986229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27985691
transcript_9229.known	chr1	-	1694	2	FSM	ENSG00000270276.3	ENST00000612061.1	1694	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	8	False	NA	NA	False	AATAAA	-20	NA	149861148	149859184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149859682_149859951
transcript_92292.known	chr22	+	898	3	FSM	ENSG00000235954.8	ENST00000437713.7	920	3	22	0	3	0	multi-exon	FALSE	canonical	3	98	junction_2	18.5	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	-40	True	NA	22	True	AATAAA	-30	NA	27919425	27924963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017_27922179_27924346
transcript_92298.known	chr22	+	626	3	FSM	ENSG00000235954.8	ENST00000670585.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	67	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTGTAATGGTTCC	32	True	NA	-18	True	AATAAA	-27	NA	27919497	27924714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017_27922228_27924346
transcript_9230.known	chr1	-	1132	1	FSM	ENSG00000270276.3	ENST00000579512.3	396	1	-51	-685	-51	685	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTATGAGATAACTGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	149861210	149860078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149860100_149861200
transcript_92302.known	chr22	+	874	3	FSM	ENSG00000235954.8	ENST00000454996.7	894	3	7	13	2	-13	multi-exon	FALSE	canonical	3	11	junction_2	6	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAAATTACCCAGTC	-26	True	NA	NA	False	ATTAAA	-8	NA	27919439	27986379	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27935150_27935231_27985691
transcript_92304.known	chr22	+	3733	4	FSM	ENSG00000235954.8	ENST00000417497.6	3733	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.65383665716478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATATGGTTTTTTTTTTT	NA	False	NA	-81	True	NA	NA	NA	27919387	28002595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27935150_27935231_27997410_27997740_27999429
transcript_92306.known	chr22	+	662	2	FSM	ENSG00000235954.8	ENST00000436996.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAATTTAGCCCCTAAA	-29	True	NA	NA	False	AAGAAA	-21	NA	27919436	27922570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017
transcript_92309.known	chr22	+	846	2	FSM	ENSG00000235954.8	ENST00000419253.1	846	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	NA	False	NA	NA	False	ATTAAA	-21	NA	27919400	27986392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27985691
transcript_9231.known	chr1	+	1234	1	FSM	ENSG00000264207.1	ENST00000577853.1	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCCTGTTTAATC	8661	False	NA	NA	False	TTTAAA	-5	NA	149861270	149862504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149861300_149862500
transcript_92310.known	chr22	+	706	2	FSM	ENSG00000235954.8	ENST00000428818.5	706	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	-9	True	NA	22	True	AATAAA	-30	NA	27919456	27924963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27924346
transcript_92311.known	chr22	+	157	1	FSM	ENSG00000276150.1	ENST00000611117.1	157	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGACAGCTGAAGATGTT	2556	False	NA	39	True	AATAGA	-38	NA	27922021	27922178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27922000_27922200
transcript_92312.known	chr22	-	2914	12	FSM	ENSG00000180957.19	ENST00000335272.10	2914	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	255.754983470993	1832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	-10	True	NA	-1	True	AATAAA	-19	NA	27919256	27851668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_92313.known	chr22	-	2826	11	FSM	ENSG00000180957.19	ENST00000320996.14	2826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	312.237665889303	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-9	True	NA	-2	True	AATAAA	-18	NA	27919255	27851669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_27853664_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_92314.known	chr22	-	2963	11	NNC	ENSG00000180957.19	novel	2914	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	213.034363425246	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	831	False	NA	-2	True	AATAAA	-18	NA	27919306	27851669	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896635_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_92315.known	chr22	+	3239	3	FSM	ENSG00000235954.8	ENST00000670661.1	3239	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTATTGACATTTTGGG	18	True	NA	9	True	AATAAA	-17	NA	27919483	27924950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27919722_27919967_27922017
transcript_92317.known	chr22	-	2560	16	FSM	ENSG00000183765.23	ENST00000416671.5	2560	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	198.273369086443	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	NA	False	NA	-2	True	ATTAAA	-18	NA	28742422	28687742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28721517_28721632_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_92319.known	chr22	-	1971	16	FSM	ENSG00000183765.23	ENST00000382580.6	1971	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_14	188.991169693778	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGATGGAACCTGG	-17	True	NA	-22	True	NA	NA	NA	28741838	28687762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730419_28730549_28734402_28734728_28741768
transcript_9232.known	chr1	-	2194	1	FSM	ENSG00000184678.11	ENST00000369155.4	2224	1	30	0	30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTGGATTCTTTTA	1312	False	NA	-11	True	AATAAA	-19	NA	149886652	149884458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149884500_149886700
transcript_92327.known	chr22	-	1844	15	FSM	ENSG00000183765.23	ENST00000404276.6	1844	15	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_14	98.0335219635173	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	1	True	NA	-2	True	ATTAAA	-18	NA	28741820	28687742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_9233.known	chr1	+	494	1	FSM	ENSG00000184260.6	ENST00000331380.4	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTCAAAAAAAGAGCTA	-3	True	NA	46	True	NA	NA	NA	149886917	149887411	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149886900_149887400
transcript_92341.known	chr22	-	1510	14	FSM	ENSG00000183765.23	ENST00000425190.7	1510	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	157.142343040733	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	10	True	NA	-2	True	ATTAAA	-18	NA	28741811	28687742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
transcript_92349.known	chr22	-	1771	14	FSM	ENSG00000183765.23	ENST00000348295.7	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	161.571791433351	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-13	True	NA	-2	True	ATTAAA	-18	NA	28741834	28687742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_9236.nic	chr1	+	1086	2	ISM	ENSG00000178096.9	ENST00000369153.2	1096	3	11650	-304	-28	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	NA	False	NA	NA	False	ATTAAA	-17	NA	149899539	149900795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_149899673_149899842
transcript_9237.known	chr1	+	891	2	FSM	ENSG00000178096.9	ENST00000369152.6	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	-4	True	NA	NA	False	ATTAAA	-17	NA	149899567	149900795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149899673_149900009
transcript_9238.known	chr1	+	811	2	FSM	ENSG00000178096.9	ENST00000369150.1	811	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGATTTGTAAGGGATG	-3	True	NA	NA	False	NA	NA	NA	149899625	149900548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149899731_149899842
transcript_92388.known	chr22	+	846	6	FSM	ENSG00000100209.11	ENST00000495977.1	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	54.1279964528524	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	15	True	NA	6	True	AATAAA	-17	NA	28742700	28757510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742729_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_9239.known	chr1	+	743	2	FSM	ENSG00000178096.9	ENST00000476344.1	743	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTTAATGGACTGCT	6	True	NA	NA	False	ATTAAA	-20	NA	149899605	149900798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149899673_149900122
transcript_9240.known	chr1	-	4378	13	FSM	ENSG00000159164.10	ENST00000369146.8	4378	13	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_10	21.3261706725693	962	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATACCTGCTTCTGTG	-3	True	NA	-7	True	AATAAA	-28	NA	149917844	149903317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149905198_149905879_149906040_149906649_149906857_149907699_149907834_149908041_149908207_149909191_149909281_149909460_149909572_149909800_149909891_149910569_149910704_149910825_149910978_149911799_149911981_149913218_149914188_149917738
transcript_92409.known	chr22	-	573	4	FSM	ENSG00000183765.23	ENST00000650233.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	209.946554045442	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAAAACGCCGTCCTTT	1	True	NA	-86	True	AATACA	-13	NA	28741820	28725040	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28725125_28725242_28725368_28734402_28734728_28741781
transcript_92411.nnic	chr22	+	803	3	NIC	ENSG00000100209.11	novel	1106	6	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	76.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	-3	True	NA	6	True	AATAAA	-17	NA	28742009	28757510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_28742332_28751240_28751289_28757077
transcript_92418.known	chr22	-	1591	13	FSM	ENSG00000183765.23	ENST00000402731.6	1591	13	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_10	216.955240519534	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	7680	False	NA	-2	True	ATTAAA	-18	NA	28734727	28687742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28724885_28724924_28725242_28725368_28734402
transcript_92419.known	chr22	-	1959	16	FSM	ENSG00000183765.23	ENST00000405598.5	1959	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	197.201983312091	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGATGGAACCTGGG	21	True	NA	-21	True	NA	NA	NA	28741800	28687761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28737884_28738039_28741768
transcript_92420.known	chr22	+	792	6	FSM	ENSG00000100209.11	ENST00000420442.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	47.4552420708187	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	6	True	NA	3	True	AATAAA	-15	NA	28742060	28757213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_92421.known	chr22	+	955	5	FSM	ENSG00000100209.11	ENST00000398941.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	63.9623912936344	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTTCTTTTCTGGCTT	0	True	NA	11	True	AATAAA	-22	NA	28742054	28757515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28751240_28751289_28757077
transcript_92422.known	chr22	+	1048	6	FSM	ENSG00000100209.11	ENST00000450178.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	50.736180384416	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	-13	True	NA	6	True	AATAAA	-17	NA	28742041	28757510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742332_28743881_28743924_28744614_28744705_28745863_28746009_28751240_28751289_28757077
transcript_92425.known	chr22	-	1690	5	FSM	ENSG00000100219.17	ENST00000405219.7	1690	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	716.398108596052	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCCATGCAATTAAAAGG	463	False	NA	35	True	TTTAAA	-2	NA	28800133	28794588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28799959
transcript_92426.known	chr22	-	1824	5	FSM	ENSG00000100219.17	ENST00000403532.7	1824	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	722.118584444411	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTTGATTTCTTCTA	38	False	NA	-10	True	ATTAAA	-16	NA	28800558	28794556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799041_28799154_28800297
transcript_9243.known	chr1	-	1544	6	FSM	ENSG00000143368.10	ENST00000271628.9	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	1408	junction_3	156.466737679291	1612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTTCCTTGAC	-18	True	NA	-23	True	AATAAA	-18	NA	149927803	149923316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
transcript_92431.nnic	chr22	+	889	5	NNC	ENSG00000226471.7	novel	505	4	NA	NA	-9	2028	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.53962995154008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATAACCAGAATGATATTG	161	False	NA	NA	False	ATTAAA	-17	NA	28800673	28850587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_28800738_28821971_28822180_28846317_28846513_28848390_28848472_28850246
transcript_92437.nic	chr22	+	1038	3	FSM	ENSG00000226471.7	ENST00000687270.1	1018	3	-14	-6	-9	6	multi-exon	FALSE	canonical	2	5	junction_2	4.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTTTTCTGTCATTTTT	161	False	NA	16	True	AATAAA	-27	NA	28800673	28844892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28800738_28821971_28822180_28844126
transcript_92439.nnic	chr22	+	441	3	NIC	ENSG00000226471.7	novel	505	4	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCATCACAAACACATGC	161	False	NA	8	True	ATTAAA	-22	NA	28800673	28848559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_28800738_28821971_28822180_28848390
transcript_9244.known	chr1	-	3332	13	FSM	ENSG00000014914.21	ENST00000492824.5	3332	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	6.89756398222509	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGGCATTGTTTCTTG	25	True	NA	-2	True	ATTAAA	-18	NA	149936834	149928651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149929917_149930364_149930966_149931943_149932015_149932263_149932331_149933405_149933531_149933609_149933943_149934190_149934327_149934447_149934527_149934985_149935129_149935298_149935360_149935583_149935706_149936153_149936230_149936581
transcript_92443.nic	chr22	+	308	2	FSM	ENSG00000226471.7	ENST00000692644.1	307	2	-9	8	-9	0	multi-exon	FALSE	canonical	3	14	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTTGCATAGTCCCTTG	161	False	NA	5	True	ATTAAA	-19	NA	28800673	28822215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28800738_28821971
transcript_92445.known	chr22	+	516	1	FSM	ENSG00000226471.7	ENST00000585003.1	516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTTTCGTTCCATT	-6	True	NA	NA	False	AATAAA	-41	NA	28800708	28801224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28800700_28801200
transcript_92446.known	chr22	+	505	4	FSM	ENSG00000226471.7	ENST00000458080.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	4.78423336480244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCATCACAAACACATGC	-32	True	NA	8	True	ATTAAA	-22	NA	28800682	28848559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28800738_28821971_28822180_28844126_28844200_28848390
transcript_92449.known	chr22	+	6872	9	FSM	ENSG00000183579.16	ENST00000544604.7	6872	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	14.3478003540612	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGTCATTGGTCTGTT	-10	True	NA	27	True	AATACA	-21	NA	28883571	29057488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28884067_28987075_28987202_29042494_29042570_29043298_29043431_29044779_29044891_29046715_29046884_29048388_29048492_29049196_29050949_29053578
transcript_92451.known	chr22	+	2128	15	FSM	ENSG00000186998.16	ENST00000334018.11	2128	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	13.6159045657223	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	-25	True	NA	17	True	AATAAA	-23	NA	29205895	29259597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
transcript_92462.known	chr22	-	1777	7	FSM	ENSG00000100263.14	ENST00000216085.12	1777	7	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_4	95.0911843092373	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-5	True	NA	-26	True	AATAAA	-19	NA	29267981	29259871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29267747
transcript_92466.known	chr22	-	1555	7	FSM	ENSG00000100263.14	ENST00000413137.6	1555	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	264.886610961496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAGAATAAAAACCAG	-10	True	NA	-58	True	NA	NA	NA	29267945	29259903	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29260238_29260325_29260614_29260701_29260869_29261199_29261426_29265478_29265669_29267425_29267578_29267747
transcript_9247.known	chr1	+	2350	16	FSM	ENSG00000136631.15	ENST00000644526.1	2350	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	66.5456902352729	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	4	True	NA	12	True	AATAAA	-22	NA	150067847	150145329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150142837_150142932_150144708
transcript_9248.known	chr1	+	2328	15	FSM	ENSG00000136631.15	ENST00000644510.2	2328	15	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	18.0311521811445	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	2	True	NA	12	True	AATAAA	-22	NA	150067775	150145329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_92481.known	chr22	-	999	3	FSM	ENSG00000100263.14	ENST00000493894.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	43	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCGGGCGGATCA	16	False	NA	NA	False	NA	NA	NA	29267960	29265034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29265669_29267425_29267578_29267747
transcript_92484.known	chr22	+	2207	17	FSM	ENSG00000182944.18	ENST00000406548.5	2207	17	0	0	0	0	multi-exon	FALSE	canonical	3	1786	junction_8	822.803342144251	7472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	-10	True	NA	16	True	ATTAAA	-16	NA	29268272	29300336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_92485.known	chr22	+	2400	17	FSM	ENSG00000182944.18	ENST00000397938.7	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	1373	junction_8	889.008849435707	5172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	-15	True	NA	57	True	AATAAA	-21	NA	29268267	29300521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_92486.known	chr22	+	1989	16	FSM	ENSG00000182944.18	ENST00000332035.10	1989	16	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	1258.61669392322	6441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	-1	True	NA	16	True	ATTAAA	-16	NA	29268325	29300336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_92487.known	chr22	+	2189	18	FSM	ENSG00000182944.18	ENST00000414183.6	2189	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	1345.36162026176	6376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTTTTTTTTCTTCCTTC	0	True	NA	23	True	ATTAAA	-23	NA	29268315	29300343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29274264_29274283_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_92488.known	chr22	+	1265	9	FSM	ENSG00000182944.18	ENST00000333395.10	1265	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	1540.22944719285	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAACATTTTATGGT	2	True	NA	4	True	ATTAAA	-22	NA	29268317	29290684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29290412
transcript_92489.known	chr22	+	1289	8	FSM	ENSG00000182944.18	ENST00000360091.3	1289	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_6	1608.95551111107	5619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	NA	False	NA	61	True	AATAAA	-25	NA	29292158	29300525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299194_29299281_29299598_29299852_29300121
transcript_92490.known	chr22	-	4165	23	FSM	ENSG00000100280.17	ENST00000357586.7	4165	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	172.246729868562	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTCCCCAGCCAGTGTG	-12	True	NA	2	True	AATAAA	-15	NA	29388570	29327679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29328896_29329711_29329721_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29339753_29339775_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_92492.known	chr22	-	4146	21	FSM	ENSG00000100280.17	ENST00000432560.6	4146	21	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_9	32.125184824371	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCCCCAGCCAGTG	15	False	29388598	0	True	AATAAA	-13	NA	29388583	29327681	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_92493.known	chr22	-	3903	21	FSM	ENSG00000100280.17	ENST00000317368.11	3903	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	98.1407662493013	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGCAATCACGGACACT	15	False	29388598	-32	True	AATAAA	-13	NA	29388583	29327864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334351_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_92502.known	chr22	-	560	4	FSM	ENSG00000100280.17	ENST00000473606.1	560	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	232.299136651191	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTCCCACTCTCCAGA	69	False	NA	NA	False	NA	NA	NA	29388529	29359672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29359960_29363000_29363107_29367206_29367268_29388423
transcript_92505.known	chr22	+	3795	4	FSM	ENSG00000100285.10	ENST00000310624.7	3795	4	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	3.39934634239519	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGTGGGTCTAGAGCG	0	True	NA	NA	False	NA	NA	NA	29480217	29491390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29481146_29483374_29483575_29485722_29485848_29488848
transcript_92507.known	chr22	-	2676	21	FSM	ENSG00000100296.14	ENST00000397872.5	2676	21	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_20	61.3722249881817	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-4	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
transcript_92508.known	chr22	-	2374	21	FSM	ENSG00000100296.14	ENST00000397873.6	2374	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	70.8387429306873	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAGCCAATTAAAAAGC	-36	True	NA	-47	True	NA	NA	NA	29553766	29508357	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553670
transcript_92511.known	chr22	-	2560	20	FSM	ENSG00000100296.14	ENST00000397871.5	2560	20	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_19	54.6223498948301	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-4	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553447
transcript_9252.known	chr1	+	2315	15	FSM	ENSG00000136631.15	ENST00000643970.1	2315	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.8409384296569	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTCTGCTTTTCATTA	NA	False	NA	NA	False	NA	NA	NA	150067278	150145163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067607_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_92522.known	chr22	-	441	2	FSM	ENSG00000184117.12	ENST00000494966.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTTGAGGATTAAAGAT	293	False	NA	NA	False	NA	NA	NA	29581026	29579756	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29580156_29580984
transcript_92523.known	chr22	-	2013	10	FSM	ENSG00000184117.12	ENST00000216121.12	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	1738	junction_4	173.270358930634	3473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTTTCTTCATCT	-12	True	NA	NA	False	ATTAAA	-14	NA	29581113	29554807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
transcript_92524.known	chr22	-	1006	8	FSM	ENSG00000100296.14	ENST00000440771.5	1006	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	81.5172449515426	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTGAGCAGCCTCCAGC	-4	True	NA	NA	False	NA	NA	NA	29553655	29536666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
transcript_9253.known	chr1	+	2192	15	FSM	ENSG00000136631.15	ENST00000642919.1	2192	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	49.6228633940905	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTACCATGTTTCTTT	39	True	NA	NA	False	NA	NA	NA	150067812	150145210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067951_150068609_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_92532.nnic	chr22	-	1036	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	24	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	91.8634251968045	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-8	True	NA	-23	True	TATAAA	-18	NA	29766983	29730955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766871
transcript_92533.nnic	chr22	-	986	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	1	0	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_6	90.3726851555392	304	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-35	True	NA	-23	True	TATAAA	-18	NA	29767010	29730955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766948
transcript_92537.known	chr22	-	945	6	FSM	ENSG00000100319.13	ENST00000344318.4	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_5	43.4722900247963	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-32	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
transcript_92542.known	chr22	-	2468	2	FSM	ENSG00000100319.13	ENST00000489010.1	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAACAAAAAT	-36	True	NA	NA	False	NA	NA	NA	29767011	29746166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29748572_29766948
transcript_92547.known	chr22	+	584	2	FSM	ENSG00000184076.13	ENST00000401406.3	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	0	3543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCCCAAAGGCAGAAT	-3	True	NA	104	True	NA	NA	NA	29767373	29770027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29767608_29769677
transcript_92548.known	chr22	+	916	2	FSM	ENSG00000184076.13	ENST00000330029.6	916	2	0	0	0	0	multi-exon	FALSE	canonical	3	9230	junction_1	0	14600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGGCCTCATTCAAAG	-8	True	NA	10	True	AATAAA	-14	NA	29767368	29770413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29767549_29769677
transcript_92550.known	chr22	-	2823	21	FSM	ENSG00000100325.15	ENST00000397771.6	2823	21	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_19	66.6039788601252	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCTAATAAAATTTTTG	-18	True	NA	-52	True	AAAAAG	-1	NA	29838276	29788641	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834488_29834551_29838177
transcript_92551.known	chr22	-	2790	20	FSM	ENSG00000100325.15	ENST00000307790.8	2790	20	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_19	49.6908447845442	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-16	True	NA	-21	True	AATAAA	-19	NA	29838274	29788610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29838177
transcript_92559.known	chr22	-	562	2	FSM	ENSG00000100325.15	ENST00000492821.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTGTGAGCATTAAT	-16	True	NA	NA	False	GATAAA	-28	NA	29838274	29834085	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29834551_29838177
transcript_92566.nic	chr22	+	363	3	ISM	ENSG00000100330.16	ENST00000495098.5	461	5	-9	7873	1	-7873	5prime_fragment	FALSE	canonical	3	106	junction_2	9.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAACCCTGTGTCCTGA	-12	True	NA	NA	False	AGTAAA	-9	NA	29883169	29971095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_29883360_29957035_29957089_29970975
transcript_92568.known	chr22	-	902	5	FSM	ENSG00000227117.6	ENST00000429350.5	902	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.08972473588517	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGATCTCACTCTGGC	0	True	NA	NA	False	AATAAA	-27	NA	30080230	30008741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30009197_30018616_30018730_30040176_30040279_30050460_30050590_30080127
transcript_92571.nic	chr22	-	877	4	NIC	ENSG00000227117.6	novel	902	5	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGATCTCACTCTGGC	NA	False	NA	NA	False	AATAAA	-27	NA	30080307	30008741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_30009197_30018616_30018730_30050460_30050590_30080127
transcript_92573.known	chr22	+	429	4	FSM	ENSG00000176635.18	ENST00000491605.1	429	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTATTGTCCTGTTGT	NA	False	NA	NA	False	CATAAA	-17	NA	30093957	30104577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30094004_30098851_30098994_30103436_30103501_30104400
transcript_92575.nnic	chr22	-	1558	9	NNC	ENSG00000239282.8	novel	1501	9	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	40.3198152277512	924	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	41	False	NA	-4	True	AATAAA	-16	NA	30289585	30285116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_30285689_30285831_30285904_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_92576.known	chr22	-	1501	9	FSM	ENSG00000239282.8	ENST00000407689.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	11.4938842433705	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	-1	True	NA	-4	True	AATAAA	-16	NA	30289505	30285116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_92578.nnic	chr22	-	1625	9	NIC	ENSG00000239282.8	novel	1501	9	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	41.696635056081	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	41	False	NA	-4	True	AATAAA	-16	NA	30289585	30285116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_30285689_30285831_30285927_30286015_30286143_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_92580.known	chr22	-	1972	9	FSM	ENSG00000099992.16	ENST00000215790.12	1972	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	15.8740157175177	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTACAGCTAGGGGC	-6	True	NA	0	True	AATAAA	-17	NA	30326941	30291989	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30292852_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
transcript_92584.known	chr22	-	1460	8	FSM	ENSG00000239282.8	ENST00000404953.7	1460	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	41.5137056296115	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTTAATAAAGGACTT	19	False	NA	-33	True	NA	NA	NA	30289607	30285145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_92586.known	chr22	-	5090	16	FSM	ENSG00000099995.19	ENST00000215793.13	5090	16	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_4	114.969677161705	609	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATGATCATTAACTCT	9	True	NA	-33	True	AATAAA	-21	NA	30356894	30331987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30334696_30335466_30335539_30335651_30335754_30337025_30337181_30337689_30337898_30338788_30339035_30339129_30339252_30340195_30340382_30340694_30340813_30341691_30341886_30342199_30342351_30342804_30342880_30344932_30345191_30346311_30346520_30352950_30353073_30356729
transcript_92589.known	chr22	+	4207	12	FSM	ENSG00000100003.18	ENST00000615189.5	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3.43775825476164	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGAACCATCCTAGGG	-7	True	NA	NA	False	AATAAA	-29	NA	30397017	30425303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
transcript_9259.known	chr1	+	1135	4	FSM	ENSG00000136631.15	ENST00000497638.2	1135	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	11.323525167642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATTAGACTTGTAAGA	35	True	NA	NA	False	NA	NA	NA	150067808	150077029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232
transcript_92591.known	chr22	+	1733	11	FSM	ENSG00000100003.18	ENST00000405717.7	1733	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	3.59026461420325	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACTTGTGAAAATTTAT	12	True	NA	6	True	ATTAAA	-20	NA	30397036	30416975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233
transcript_92597.known	chr22	-	2011	9	FSM	ENSG00000099999.15	ENST00000382363.8	2011	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	5.47151715705982	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAAATGTGTATAGGT	-15	True	NA	-9	True	AATAAA	-22	NA	30387411	30378820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30379623_30379710_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
transcript_92598.known	chr22	-	1651	8	FSM	ENSG00000099999.15	ENST00000215798.10	1651	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	5.82745087267747	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTGCGGCTTTGTG	-6	True	NA	-80	True	NA	NA	NA	30387125	30378982	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
transcript_9260.nnic	chr1	+	936	4	NNC	ENSG00000136631.15	novel	2695	14	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83.4918492362511	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGTGATTTAGTTTTA	13	True	NA	9	True	AATAAA	-19	NA	150067786	150145326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_150067951_150093626_150093649_150110495_150110628_150144708
transcript_92602.known	chr22	+	1759	3	FSM	ENSG00000187860.11	ENST00000399824.6	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	1	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGGCACGGTGGCTG	10	False	NA	NA	False	AATAAA	-17	NA	30356634	30367096	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30357133_30361960_30362115_30365989
transcript_92604.known	chr22	+	1133	4	FSM	ENSG00000242114.6	ENST00000266263.10	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	72.0324001173546	2282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	-2	True	NA	31	True	AATAAA	-14	NA	30425767	30429054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30425947_30426716_30426845_30427170_30427404_30428461
transcript_92605.known	chr22	+	1229	10	FSM	ENSG00000100003.18	ENST00000402592.7	1229	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.55194729106394	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGAGCTGGCTGGCCA	20	True	NA	88	True	NA	NA	NA	30397044	30422601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
transcript_92606.known	chr22	+	891	3	FSM	ENSG00000242114.6	ENST00000355143.8	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	263	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	6	True	NA	30	True	AATAAA	-13	NA	30425775	30429053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30425947_30426716_30426845_30428461
transcript_92608.known	chr22	-	2510	12	FSM	ENSG00000133488.15	ENST00000255858.12	2510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.48964798865985	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGGCTGCG	-6	True	NA	NA	False	NA	NA	NA	30505695	30488901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30490247_30491572_30491743_30491833_30491974_30492048_30492156_30492473_30492558_30494149_30494211_30494865_30494962_30495253_30495443_30495582_30495643_30495927_30495972_30503676_30503753_30505557
transcript_9261.known	chr1	+	382	2	FSM	ENSG00000136631.15	ENST00000643611.1	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	25	True	NA	NA	False	AATAAA	-16	NA	150067798	150068859	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067951_150068629
transcript_92610.known	chr22	-	1791	4	FSM	ENSG00000128242.13	ENST00000401975.5	1791	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	87.4693597146389	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGCCTCAGTGGTGGTG	9775	False	NA	-5	True	AGTAAA	-25	NA	30564889	30554636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30556094_30557261_30557402_30558259_30558389_30564824
transcript_92611.known	chr22	-	2760	17	FSM	ENSG00000100029.18	ENST00000402281.5	2760	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	258.621948991187	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTGTGTCCATGAGCC	NA	False	NA	-4	True	ATTAAA	-23	NA	30607083	30576627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30592131_30592399_30605460_30605518_30606808
transcript_92617.known	chr22	-	1988	15	FSM	ENSG00000100029.18	ENST00000335214.8	1988	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	165.101035856279	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGCCCAGCCTGAT	-3	True	NA	NA	False	NA	NA	NA	30591858	30576834	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580687_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_92618.known	chr22	-	2144	15	FSM	ENSG00000100029.18	ENST00000402284.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	179.202143299865	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTTATTAAATGACT	9	True	NA	-41	True	NA	NA	NA	30591880	30576664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584415_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_9262.nic	chr1	+	1424	6	NIC	ENSG00000023902.14	novel	1809	5	NA	NA	-248	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_1	112.329159170716	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCATTGCTCTTGCTGAT	21	False	NA	7	True	GATAAA	-42	NA	150149667	150159628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150149787_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_92625.known	chr22	+	1870	9	FSM	ENSG00000185339.9	ENST00000407817.3	1870	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	133.911759659113	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGGCCTGGTGCCTCA	-9	True	NA	24	True	ATTAAA	-24	NA	30607203	30627060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30607396_30610870_30611064_30612872_30612962_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_92628.known	chr22	+	2192	9	FSM	ENSG00000185339.9	ENST00000215838.8	2192	9	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_7	39.0664498003082	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTGTTGATATT	-11	True	NA	NA	False	NA	NA	NA	30607173	30627271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30607396_30610870_30611064_30612872_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_92638.nnic	chr22	-	657	4	NNC	ENSG00000100029.18	novel	2265	15	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	335.881923697401	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTGTGTCCATGAG	NA	False	NA	-6	True	ATTAAA	-21	NA	30591951	30576629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_30576957_30588066_30588175_30589190_30589271_30591809
transcript_92639.known	chr22	-	713	4	FSM	ENSG00000100029.18	ENST00000466614.1	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_3	19.6694913225759	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCTCCATGAAGGCAC	-1	True	NA	NA	False	NA	NA	NA	30591890	30586997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30587396_30588020_30588175_30589190_30589271_30591809
transcript_9264.known	chr1	+	2114	6	FSM	ENSG00000023902.14	ENST00000369124.5	2114	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	25.810075552001	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTTCTCATTCCTAG	20	True	NA	4	True	ATTAAA	-16	NA	150149915	150160065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150150288_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_92642.known	chr22	-	490	3	FSM	ENSG00000100029.18	ENST00000467368.1	490	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAGAATGAATATAACA	177	False	NA	NA	False	AATAAA	-22	NA	30606869	30603777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30604103_30605413_30605518_30606808
transcript_92644.known	chr22	-	630	3	FSM	ENSG00000100029.18	ENST00000492986.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	2	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAGAAGAATGAATATAA	NA	False	NA	NA	False	AATAAA	-20	NA	30607058	30603779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30604103_30605460_30605518_30606808
transcript_92645.known	chr22	-	999	4	FSM	ENSG00000100029.18	ENST00000441668.5	999	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	263.219806752202	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTGTGTCCATGAG	NA	False	NA	-6	True	ATTAAA	-21	NA	30579923	30576629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30577130_30578836_30578996_30579136_30579304_30579750
transcript_92647.known	chr22	-	1306	3	FSM	ENSG00000167065.14	ENST00000404885.5	1306	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGGCTCTGTGTGAATT	0	True	NA	-1	True	AGTAAA	-17	NA	30667843	30652050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30652298_30663403_30664081_30667461
transcript_92650.known	chr22	-	3050	2	FSM	ENSG00000167065.14	ENST00000334679.4	3050	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAGAAAAAAAG	-32	True	NA	NA	False	AAAAAG	-16	NA	30667875	30661444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30664081_30667461
transcript_92652.known	chr22	-	5657	26	FSM	ENSG00000133422.14	ENST00000397641.8	5657	26	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_11	28.7506243410469	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTGTTTTCTTAGTA	0	True	NA	0	True	TATAAA	-24	NA	30968774	30925129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
transcript_92653.known	chr22	+	1817	4	FSM	ENSG00000253352.10	ENST00000602971.2	1817	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	48.1317635939788	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACTACTGTTTCCAAG	7	True	NA	15	True	NA	NA	NA	30969294	30976022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30969387_30972047_30972173_30972854_30973602_30975169
transcript_92657.nic	chr22	+	4601	3	NIC	ENSG00000253352.10	novel	4650	4	NA	NA	-46	1	intron_retention	FALSE	canonical	2	15	junction_1	81.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGGGTTTCTGTT	582	False	NA	26	True	AATAAA	-22	NA	30969198	30978849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_30969387_30972854_30973588_30975169
transcript_92659.known	chr22	+	4449	3	FSM	ENSG00000253352.10	ENST00000643920.1	4449	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	52	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGCTTAAGTTACT	-10	True	NA	8	True	AATAAA	-4	NA	30969277	30978831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30969387_30972923_30973602_30975169
transcript_92661.known	chr22	-	546	2	FSM	ENSG00000269987.1	ENST00000602847.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATCCACAAGGACAAAA	NA	False	NA	NA	False	NA	NA	NA	30978848	30976514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30976933_30978720
transcript_92662.known	chr22	+	3296	21	FSM	ENSG00000183963.19	ENST00000333137.12	3296	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	21.079373804741	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	-1	True	NA	28	True	GATAAA	-18	NA	31081317	31104624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_92664.nic	chr22	+	905	4	ISM	ENSG00000183963.19	ENST00000624247.1	1263	9	3341	0	-761	0	3prime_fragment	FALSE	canonical	3	105	junction_2	12.7279220613579	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	2734	False	NA	28	True	GATAAA	-18	NA	31098900	31104624	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_31099180_31099744_31099897_31100884_31101050_31104315
transcript_92668.nic	chr22	+	739	3	ISM	ENSG00000183963.19	ENST00000619644.4	3227	21	16041	0	-761	0	3prime_fragment	FALSE	canonical	3	44	junction_2	44	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGACTCCTCTCTGCGT	2734	False	NA	27	True	GATAAA	-17	NA	31098900	31104623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_31099180_31099744_31099897_31104315
transcript_92670.known	chr22	-	694	5	FSM	ENSG00000198832.11	ENST00000400299.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	12.9494208364699	1940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCGACTCCTTCGT	-17	True	NA	-5	True	ACTAAA	-17	NA	31107568	31104776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376
transcript_92671.known	chr22	-	500	5	FSM	ENSG00000198832.11	ENST00000460642.5	500	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	145.131621295981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGGGCGCCCGCGAAGC	10	True	NA	NA	False	NA	NA	NA	31107541	31105024	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106047_31107376
transcript_92672.known	chr22	-	605	5	FSM	ENSG00000198832.11	ENST00000491958.5	605	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	138.221516053037	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	-2	True	NA	NA	False	NA	NA	NA	31107553	31105000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106116_31107376
transcript_92673.known	chr22	-	703	5	FSM	ENSG00000198832.11	ENST00000465536.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.427456441748	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAGAATGAAGCGCTCA	23	True	NA	NA	False	NA	NA	NA	31107528	31104925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106164_31107376
transcript_92679.known	chr22	-	334	4	FSM	ENSG00000198832.11	ENST00000469262.1	334	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	14.613540144522	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACCCGCGAAGAGAT	227	False	NA	NA	False	NA	NA	NA	31107466	31105113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105287_31105657_31105693_31105929_31105966_31107376
transcript_92681.known	chr22	+	2215	13	FSM	ENSG00000185133.14	ENST00000404390.7	2215	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	13.0213499897497	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	17	True	NA	5	True	ATTAAA	-13	NA	31122993	31134696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31123120_31124844_31124907_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_92682.known	chr22	+	1613	7	FSM	ENSG00000185133.14	ENST00000404453.5	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	7.54431353183752	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	17	True	NA	-55	True	NA	NA	NA	31127788	31134636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_92683.known	chr22	+	1564	6	FSM	ENSG00000185133.14	ENST00000402238.5	1564	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	17.511139311878	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	-12	True	NA	-55	True	NA	NA	NA	31127759	31134636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133609_31133715_31133912
transcript_92684.known	chr22	+	3348	13	FSM	ENSG00000185133.14	ENST00000331075.10	3348	13	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	11.5938201929591	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGGCTCTTTCCTACTT	-11	True	NA	6	True	ATTAAA	-14	NA	31122965	31134697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31123120_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_92685.known	chr22	-	2600	7	FSM	ENSG00000100078.4	ENST00000215885.4	2600	7	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_5	12.7638813323639	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-5	True	NA	-24	True	ATTAAA	-22	NA	31140508	31134806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138411_31138666_31138800_31139840
transcript_92688.nnic	chr22	-	2475	6	NIC	ENSG00000100078.4	novel	2600	7	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	29.0337734371542	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	NA	False	NA	-24	True	ATTAAA	-22	NA	31140518	31134806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138666_31138800_31139840
transcript_92692.known	chr22	+	3182	7	FSM	ENSG00000138942.17	ENST00000326132.11	3182	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_5	13.7436854187255	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGACTTCTTGTCTGTG	-31	True	NA	6	True	ATTAAA	-24	NA	31160181	31207019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_92698.nnic	chr22	+	622	3	NNC	ENSG00000138942.17	novel	563	5	NA	NA	-20	-15017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTCTAGCAGATCAGG	-51	True	NA	NA	False	AATAAA	-23	NA	31160161	31182028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_31160304_31176261_31176418_31181704
transcript_92702.known	chr22	+	3315	7	NNC	ENSG00000138942.17	novel	2737	8	NA	NA	0	0	intron_retention	FALSE	non_canonical	0	0	junction_5	65.8246829759847	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCTTGGACTTCTTG	-2	True	NA	0	True	ATTAAA	-18	NA	31160210	31207013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31197159_31201497_31201616_31204488
transcript_92704.known	chr22	+	3667	16	FSM	ENSG00000182541.18	ENST00000331728.9	3667	16	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_15	21.3412485316321	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	22	True	NA	46	True	AATAAA	-25	NA	31212297	31280080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_92705.known	chr22	+	2657	15	FSM	ENSG00000182541.18	ENST00000406516.5	2657	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	63.244423808405	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	-2	True	NA	NA	False	ATTAAA	-19	NA	31212273	31277638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31212425_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_92711.known	chr22	+	1042	3	FSM	ENSG00000182541.18	ENST00000462625.1	1042	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCTCACTCCAGCAACAG	-37	True	NA	NA	False	NA	NA	NA	31212238	31259046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31212425_31225719_31225820_31258290
transcript_92713.known	chr22	-	2420	6	FSM	ENSG00000100100.13	ENST00000215912.10	2420	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	1.89736659610103	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCACATTGCCAAGTTT	-19	True	NA	-6	True	ATTAAA	-11	NA	31292488	31281599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31283289_31289314_31289394_31289498_31289700_31290964_31291085_31291179_31291297_31292274
transcript_92716.known	chr22	-	2374	5	FSM	ENSG00000100100.13	ENST00000441972.5	2374	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.33853912601566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTCCA	-3	True	NA	-19	True	NA	NA	NA	31292534	31281612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31283289_31289498_31289700_31290964_31291085_31291179_31291297_31292274
transcript_92719.known	chr22	-	3711	5	FSM	ENSG00000100105.18	ENST00000405309.7	3711	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	153.18371323349	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	341	False	NA	-13	True	ATTAAA	-16	NA	31346232	31325808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31327310_31328786_31328860_31335691_31335864_31342896_31342961_31344331
transcript_9272.known	chr1	-	3054	5	FSM	ENSG00000143401.15	ENST00000629042.2	3054	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_4	506.904021980493	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAGTGTATAGCATTC	-1	True	NA	-4	True	AATAAA	-23	NA	150236156	150218417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229115_150235732
transcript_92724.known	chr22	-	3638	4	FSM	ENSG00000100105.18	ENST00000351933.8	3638	4	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	51.6999892542435	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	341	False	NA	-13	True	ATTAAA	-16	NA	31346232	31325808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31327310_31335691_31335864_31342896_31342961_31344331
transcript_92726.nnic	chr22	-	1178	3	NNC	ENSG00000100105.18	novel	2516	3	NA	NA	-71	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	45.5	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	3217	False	NA	-4	True	GATAAA	-17	NA	31343356	31340676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_31341684_31342896_31342961_31343249
transcript_92744.nic	chr22	+	796	4	ISM	ENSG00000198089.16	ENST00000400288.7	4031	33	-18	87151	-1	332	5prime_fragment	FALSE	canonical	3	39	junction_3	22.9927524813074	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAATAACAAGCAA	-2	True	NA	NA	False	AAAAAG	-4	NA	31496517	31531437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_31496638_31508254_31508377_31528689_31528864_31531057
transcript_92745.known	chr22	-	3647	19	FSM	ENSG00000184708.18	ENST00000330125.10	3647	19	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	26.0813660363292	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-26	True	NA	15	True	ATTAAA	-28	NA	31489842	31439366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_92748.nic	chr22	-	1720	10	ISM	ENSG00000184708.18	ENST00000330125.10	3647	19	52	14693	34	-9428	5prime_fragment	FALSE	canonical	3	158	junction_9	14.229164972073	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGAGTAAGTTGGAAA	26	True	NA	NA	False	AATAAA	-17	NA	31489790	31454059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_92751.known	chr22	+	873	1	FSM	ENSG00000287817.1	ENST00000665497.1	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTTTACAGGCAAGA	NA	False	NA	NA	False	AATAAA	-17	NA	31490149	31491022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31490100_31491000
transcript_92754.known	chr22	-	1723	8	FSM	ENSG00000241878.12	ENST00000435900.5	1723	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	125.395211964706	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACCTGATGAGTGACC	257	False	NA	NA	False	NA	NA	NA	31662180	31618976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620552_31620600_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_92757.nic	chr22	-	2520	8	NIC	ENSG00000241878.12	novel	2669	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_7	177.852839879101	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	2	True	NA	-1	True	AATAAA	-18	NA	31630873	31618490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31630803
transcript_92758.known	chr22	-	1963	8	FSM	ENSG00000241878.12	ENST00000439502.7	2358	8	-217	612	-211	-126	multi-exon	FALSE	canonical	3	357	junction_6	21.5804144008934	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATTCACCTCATCCTG	5	True	NA	NA	False	NA	NA	NA	31662432	31619102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_92766.nic	chr22	-	2229	7	NIC	ENSG00000241878.12	novel	2669	8	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	2	4	junction_6	177.544986474477	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-3	True	NA	-1	True	AATAAA	-18	NA	31630836	31618490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31630803
transcript_92769.known	chr22	-	2264	7	FSM	ENSG00000241878.12	ENST00000437808.5	2264	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	150.516241279434	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATCAAACTTAAAA	4	True	NA	-21	True	NA	NA	NA	31662221	31618510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31662143
transcript_92772.known	chr22	-	2534	7	FSM	ENSG00000241878.12	ENST00000460723.5	2534	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	19.192012227313	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	10	True	NA	-1	True	AATAAA	-18	NA	31662215	31618490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621886_31648100_31648277_31650698_31650779_31662143
transcript_92777.known	chr22	-	2194	7	FSM	ENSG00000241878.12	ENST00000397500.5	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	176.731827605808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATTGAATTTTTTCAA	2	True	NA	NA	False	NA	NA	NA	31630831	31618613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31630803
transcript_92778.nic	chr22	-	2271	7	NIC	ENSG00000241878.12	novel	2358	8	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	138.757181996304	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	148	False	NA	-1	True	AATAAA	-18	NA	31662289	31618490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_31619837_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_92784.nic	chr22	-	1630	3	ISM	ENSG00000241878.12	ENST00000474017.5	1760	6	-86	27429	-68	-20995	5prime_fragment	FALSE	canonical	3	357	junction_1	12.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCGGTACTATATCAC	148	False	NA	NA	False	NA	NA	NA	31662289	31646872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_31648277_31650698_31650779_31662143
transcript_92791.nic	chr22	-	2416	4	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	6	34261	6	1119	5prime_fragment	FALSE	canonical	3	52	junction_3	17.2497987105808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATGGCTGATTCAGGAA	11	True	NA	NA	False	NA	NA	NA	31750126	31715607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_31717292_31725537_31725611_31738386_31738912_31749992
transcript_92794.nic	chr22	-	1058	4	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	-57	35682	-49	-302	5prime_fragment	FALSE	canonical	3	52	junction_3	17.2497987105808	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGTGAAGAATTAAAAAG	NA	False	NA	NA	False	AAGAAA	-3	NA	31750189	31717028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_31717292_31725537_31725611_31738386_31738912_31749992
transcript_92798.known	chr22	-	718	3	FSM	ENSG00000183530.14	ENST00000461722.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	39.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCTGCTGAAAAGACAG	14	True	NA	NA	False	NA	NA	NA	31750072	31716726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31717292_31725537_31725611_31749992
transcript_92801.nic	chr22	-	789	3	ISM	ENSG00000183530.14	ENST00000327423.11	10827	9	-57	44197	-49	0	5prime_fragment	FALSE	canonical	3	52	junction_2	19	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTATTTATTTCTCT	NA	False	NA	NA	False	NA	NA	NA	31750189	31725543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_31725611_31738386_31738912_31749992
transcript_92802.known	chr22	-	661	3	FSM	ENSG00000183530.14	ENST00000412743.1	661	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	44	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTATTTATTTCTCT	-3	True	NA	NA	False	NA	NA	NA	31750140	31725543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31725611_31738386_31738912_31750071
transcript_92803.known	chr22	-	10827	9	FSM	ENSG00000183530.14	ENST00000327423.11	10827	9	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_8	22.3295628036019	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	5	True	NA	-8	True	AATAAA	-22	NA	31750132	31681346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749992
transcript_92807.known	chr22	+	5286	41	FSM	ENSG00000100150.20	ENST00000646969.1	5286	41	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_22	33.2380711684658	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTACATATCAGAAGCAAAT	-24	True	NA	-34	True	NA	NA	NA	31753994	31906975	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813_31784876_31792032_31792103_31792744_31792818_31797599_31797704_31798581_31798657_31802703_31802839_31804161_31804224_31804841_31804916_31806121_31806192_31809610_31809648_31810520_31810642_31814991_31815213_31819021_31819226_31833914_31833981_31836971_31837156_31838684_31838846_31843094_31843213_31843644_31843813_31845017_31845238_31846833_31846968_31857444_31857554_31861367_31861434_31870589_31870745_31873254_31873333_31874272_31874406_31876156_31876266_31879524_31879753_31893581_31893752_31897481_31897654_31901741_31901803_31905983_31906067_31906204
transcript_92809.nic	chr22	+	964	10	ISM	ENSG00000100150.20	ENST00000400242.8	2448	22	-24	31006	0	197	5prime_fragment	FALSE	canonical	3	80	junction_9	21.7499822619482	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGACTCCAGATTTAAAT	-24	True	NA	NA	False	ATTAAA	-31	NA	31753994	31784985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813
transcript_9281.known	chr1	-	621	3	FSM	ENSG00000143401.15	ENST00000532744.2	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	608.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCGTTCTTAATACTCA	91	False	NA	NA	False	AATGAA	-32	NA	150236064	150229071	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150229238_150230570_150230694_150235732
transcript_92811.known	chr22	+	1478	9	FSM	ENSG00000100150.20	ENST00000437411.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	41.197694110229	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	-75	True	NA	6	True	AATAAA	-20	NA	31753943	31784788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_92814.known	chr22	+	1278	9	FSM	ENSG00000100150.20	ENST00000645015.1	1278	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	13.8377879373836	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCTACTCAGG	9	True	NA	NA	False	AATACA	-30	NA	31754027	31784504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_9282.known	chr1	-	3407	7	FSM	ENSG00000143401.15	ENST00000583931.6	3407	7	0	0	0	0	multi-exon	TRUE	canonical	3	1129	junction_5	58.5775838809807	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-1	True	NA	-3	True	AATAAA	-24	NA	150236112	150218416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_92824.known	chr22	+	1424	7	FSM	ENSG00000100150.20	ENST00000643948.1	1424	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	44.9360656933826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGTGTGGTGACAC	-64	True	NA	NA	False	AATACA	-5	NA	31753954	31769772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813
transcript_92825.nic	chr22	+	1057	7	ISM	ENSG00000100150.20	ENST00000645015.1	1278	9	-33	15227	0	-495	5prime_fragment	FALSE	canonical	3	109	junction_1	13.4742552876052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATTGTTGTAGCTCAA	-24	True	NA	NA	False	NA	NA	NA	31753994	31769277	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813
transcript_92828.known	chr22	+	1751	2	FSM	ENSG00000128245.15	ENST00000248975.6	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	1939	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	0	True	NA	46	True	AATAAA	-20	NA	31944534	31957603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31944821_31956138
transcript_92829.known	chr22	+	1735	2	FSM	ENSG00000128245.15	ENST00000471374.1	1735	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	431	False	NA	46	True	AATAAA	-20	NA	31944965	31957603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31945236_31956138
transcript_9283.known	chr1	-	2989	7	FSM	ENSG00000143401.15	ENST00000616917.4	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	440.389978693128	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAAATTTGCAGTA	-2	True	NA	-58	True	AATAAA	-21	NA	150234678	150218554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150234578
transcript_92830.known	chr22	+	407	1	FSM	ENSG00000232346.1	ENST00000423610.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4479	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTGCAGTGCTGTA	22	False	NA	NA	False	NA	NA	NA	32039489	32039896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32039500_32039900
transcript_92832.known	chr22	-	1378	9	FSM	ENSG00000205856.4	ENST00000382097.4	1378	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.927024810886958	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTGCCCAAGGTCAC	0	True	NA	NA	False	AATAAA	-16	NA	32159303	32149005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_32149614_32149752_32149781_32150318_32150480_32150991_32151020_32151486_32151552_32152066_32152095_32152561_32152627_32154243_32154319_32158983
transcript_92837.nnic	chr22	+	1249	2	Antisense	novelGene_ENSG00000275656.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCGATATTAAATGATG	NA	False	NA	8	True	AATAAA	-17	NA	32137599	32191700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr22_+_32137913_32190764
transcript_9284.known	chr1	-	616	3	FSM	ENSG00000143401.15	ENST00000534437.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	586.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTAGTATGGTGCA	9425	False	NA	-9	True	ATTAAA	-16	NA	150226730	150220377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223295_150226607
transcript_92848.known	chr22	-	2019	12	FSM	ENSG00000100220.12	ENST00000216038.6	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_1	111.584012006816	4108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCGTCTGTTGCTTTG	-15	True	NA	-10	True	AAGAAA	-29	NA	32412247	32387581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_32388100_32392239_32392360_32393891_32394003_32395025_32395215_32396073_32396250_32397940_32398101_32399602_32399760_32401746_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_9285.known	chr1	-	1048	5	FSM	ENSG00000143401.15	ENST00000369114.9	1048	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	575.967609766383	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATCACTTTTACACAGG	70	False	NA	-23	True	ATTAAA	-2	NA	150236085	150220391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220759_150223185_150223241_150230570_150230694_150231776_150231927_150235732
transcript_92851.known	chr22	+	1921	9	FSM	ENSG00000100225.18	ENST00000425028.5	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	216.589437357873	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-15	True	NA	53	True	ATTAAA	-16	NA	32474797	32498829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475125_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_92856.known	chr22	+	1888	9	FSM	ENSG00000100225.18	ENST00000397426.5	1888	9	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	205.767124135514	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	16	False	NA	53	True	ATTAAA	-16	NA	32475256	32498829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475399_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_92857.known	chr22	+	1535	9	FSM	ENSG00000100225.18	ENST00000452138.3	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	219.14204155068	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTGTTATTTTCTGAT	244	False	NA	NA	False	NA	NA	NA	32475236	32498608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475399_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_92858.known	chr22	+	1900	8	FSM	ENSG00000100225.18	ENST00000420700.5	1900	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	222.869871431373	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-56	True	NA	53	True	ATTAAA	-16	NA	32474675	32498829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475125_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_92859.nnic	chr22	+	1621	8	NIC	ENSG00000100225.18	novel	1888	9	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	44	junction_1	232.790525089464	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	236	False	NA	53	True	ATTAAA	-16	NA	32475228	32498829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_32475399_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_9286.known	chr1	-	1339	6	FSM	ENSG00000143401.15	ENST00000436748.6	1339	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	485.490102885733	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTAGGTGATCCAG	4	True	NA	97	True	TATAAA	-35	NA	150236022	150220271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150231776_150231927_150235732
transcript_92868.known	chr22	+	2060	9	FSM	ENSG00000100225.18	ENST00000266087.12	2060	9	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_1	110.749435664476	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	-2	True	NA	53	True	ATTAAA	-16	NA	32474810	32498829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475125_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_9287.known	chr1	+	190	1	FSM	ENSG00000222222.1	ENST00000410290.1	190	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGGATTAAAATTTAATG	-1	True	NA	-27	True	NA	NA	NA	150236966	150237156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150237000_150237200
transcript_92874.nnic	chr22	-	1300	7	NNC	ENSG00000185666.15	novel	855	3	NA	NA	-3	43118	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	21.540659228538	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGAGGGCCACACCCAC	-6	True	NA	-2	True	AATAAA	-20	NA	33058384	32821456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_32821791_32864914_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
transcript_92875.nnic	chr22	-	827	6	NNC	ENSG00000185666.15	novel	855	3	NA	NA	-3	43118	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	33.6178524001757	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGAGGGCCACACCCAC	-6	True	NA	-2	True	AATAAA	-20	NA	33058384	32821456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_32821791_32864914_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33058291
transcript_92878.known	chr22	-	7867	14	FSM	ENSG00000185666.15	ENST00000358763.7	7867	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	19.1206075514377	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATGGTTTTGTATGAAT	-3	True	NA	NA	False	AAGAAA	-33	NA	33058381	32507819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_32513825_32518042_32518335_32527917_32528006_32528873_32529009_32533792_32533896_32538035_32538111_32541570_32541714_32596673_32596737_32864914_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
transcript_92879.known	chr22	+	4597	5	FSM	ENSG00000100234.12	ENST00000266085.7	4597	5	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_4	6.68487097856047	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTGTCTCTTGCCTT	0	True	NA	21	True	AGTAAA	-21	NA	32801704	32863041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32802123_32849451_32849535_32857248_32857361_32858016_32858139_32859179
transcript_92881.known	chr22	-	3823	15	FSM	ENSG00000133424.22	ENST00000676370.1	3823	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	49.7003264474147	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCCTCCCACTCTTGCA	NA	False	NA	-10	True	AATAAA	-26	NA	33922596	33273076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_33274625_33277059_33277256_33283201_33283349_33304228_33304508_33316084_33316249_33337645_33337802_33381918_33382045_33384191_33384305_33432160_33432266_33564847_33565020_33604434_33604559_33626243_33626327_33650366_33650669_33761370_33761559_33922476
transcript_9289.known	chr1	+	1531	12	FSM	ENSG00000118298.12	ENST00000647854.1	1531	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	120.024997396376	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAAATTAAAGTTTC	-7	True	NA	-1	True	GATAAA	-36	NA	150257250	150265049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150257329_150258079_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_92899.known	chr22	+	4216	12	FSM	ENSG00000100281.14	ENST00000418170.5	4216	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	29.9630626599976	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGTCTCAGCTGTCTTT	-5	True	NA	35	True	AATAAA	-45	NA	35257486	35295807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647_35265604_35283961_35284044_35285996_35286062_35287346_35287453_35288237_35288408_35292991_35293115_35293606
transcript_92905.nic	chr22	+	1331	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-16	30237	-10	0	5prime_fragment	FALSE	canonical	3	35	junction_2	23.9099874529453	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	-15	True	NA	4	True	AAAAAG	-10	NA	35257476	35265570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_92907.known	chr22	+	575	2	FSM	ENSG00000100281.14	ENST00000466438.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCCTAGGTAGGTC	-3	True	NA	NA	False	GGGGCT	-3	NA	35257488	35258588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35257558_35258082
transcript_92908.known	chr22	+	1325	5	FSM	ENSG00000100281.14	ENST00000455359.5	1325	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.2414363469547	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	4	True	NA	1	True	AAAAAG	-7	NA	35257495	35265567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_92909.known	chr22	+	1257	4	FSM	ENSG00000100281.14	ENST00000420166.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	24.8327740429189	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	NA	False	NA	4	True	AAAAAG	-10	NA	35257451	35265570	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647
transcript_92911.known	chr22	+	2278	15	FSM	ENSG00000100284.22	ENST00000449058.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_6	21.569654610123	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	17	True	NA	13	True	ATTAAA	-13	NA	35299893	35347973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_92913.nnic	chr22	+	2268	14	NIC	ENSG00000100284.22	novel	2278	15	NA	NA	21	0	combination_of_known_splicesites	TRUE	canonical	3	18	junction_2	61.2001276248814	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	550	False	NA	13	True	ATTAAA	-13	NA	35299824	35347973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_35299981_35317876_35317962_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_92917.nic	chr22	+	689	4	ISM	ENSG00000100284.22	ENST00000395736.7	560	6	-65	414	21	-207	5prime_fragment	FALSE	canonical	3	203	junction_3	21.4527905462721	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAGGGAAAGAATGTC	550	False	NA	NA	False	NA	NA	NA	35299824	35323396	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027
transcript_92920.known	chr22	+	1554	5	FSM	ENSG00000100292.18	ENST00000216117.9	1554	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.5554619063266	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	1	True	NA	9	True	AATAAA	-19	NA	35381095	35394207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_92921.known	chr22	+	1697	5	FSM	ENSG00000100292.18	ENST00000481190.2	1697	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	50.9724190126386	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTTTCATGGGCTTTGT	-2	True	NA	16	True	AATAAA	-26	NA	35381092	35394214	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35381330_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_92923.known	chr22	+	1062	4	FSM	ENSG00000100292.18	ENST00000677931.1	1062	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.8111831820431	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	1	True	NA	9	True	AATAAA	-19	NA	35381095	35394207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35381197_35383105_35383227_35389863_35389964_35393467
transcript_92924.known	chr22	+	1454	4	FSM	ENSG00000100292.18	ENST00000679074.1	1454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.39696961967	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	1	True	NA	9	True	AATAAA	-19	NA	35381095	35394207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35393467
transcript_92926.known	chr22	+	3458	17	FSM	ENSG00000100297.16	ENST00000216122.9	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	1292	junction_10	114.914761209124	1114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGGTCATTGTTGAA	-8	True	NA	19	True	AATACA	-16	NA	35400139	35425431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
transcript_92927.nnic	chr22	-	1174	5	NNC	ENSG00000198125.13	novel	1153	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.21416340365355	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGCCTGGCATTTTTC	0	True	NA	0	True	AATAAA	-19	NA	35622529	35606763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_35607444_35610883_35611107_35617162_35617266_35620208_35620325_35622477
transcript_92928.known	chr22	-	582	4	FSM	ENSG00000198125.13	ENST00000406324.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2.49443825784929	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCCCGGGTTCAAG	814	False	NA	NA	False	NA	NA	NA	35622561	35607271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35607444_35610883_35611107_35617162_35617266_35622477
transcript_92929.nnic	chr22	-	987	3	NIC	ENSG00000198125.13	novel	582	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGCCTGGCATTTTTC	814	False	NA	0	True	AATAAA	-19	NA	35622561	35606763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_35607444_35610883_35611107_35622477
transcript_92932.known	chr22	-	7224	14	FSM	ENSG00000100320.23	ENST00000438146.7	7224	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	136.791553080162	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	-21	True	NA	-5	True	AATAAA	-15	NA	36028824	35738735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
transcript_92943.known	chr22	-	1254	13	FSM	ENSG00000100320.23	ENST00000416721.6	1254	13	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_12	93.3464276528864	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATATTTACTAGTAGAGG	9835	False	NA	-134	True	NA	NA	NA	35840284	35744147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_92946.known	chr22	-	1935	13	FSM	ENSG00000100320.23	ENST00000449924.6	1935	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	138.775898483851	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	8	True	NA	-4	True	ATTAAA	-20	NA	35840407	35743601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_92963.known	chr22	-	6932	12	FSM	ENSG00000100320.23	ENST00000405409.6	6932	12	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	144.718821132853	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	7	True	NA	-5	True	AATAAA	-15	NA	35840587	35738735	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_92965.known	chr22	-	1706	12	FSM	ENSG00000100320.23	ENST00000414461.6	1706	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	164.503359758702	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	9901	False	NA	-4	True	ATTAAA	-20	NA	35840218	35743601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_92969.known	chr22	-	1538	12	FSM	ENSG00000100320.23	ENST00000262829.11	1538	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	143.167704932143	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATGCATTTCCATGTCT	8	True	NA	20	True	TTTAAA	-20	NA	35840407	35743932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35781599_35781744_35809779_35810005_35840191
transcript_92980.known	chr22	-	1004	4	FSM	ENSG00000100320.23	ENST00000491982.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	103.347310882609	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTATCAGAACAATTCAA	12	True	NA	NA	False	AATAAA	-29	NA	35840403	35777655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35778079_35781599_35781744_35809779_35810005_35840191
transcript_92983.known	chr22	-	1354	12	FSM	ENSG00000100320.23	ENST00000397303.6	1354	12	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_11	93.6626617968763	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAACTGTGGTAAAAAAA	NA	False	NA	-5	True	NA	NA	NA	35810004	35743957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779
transcript_92986.known	chr22	-	2429	5	FSM	ENSG00000128335.14	ENST00000358502.10	2429	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	3.56195171219375	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTTGTTCGAGTCAT	-1	True	NA	-5	True	AATAAA	-17	NA	36239527	36226208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440
transcript_92988.known	chr22	-	7451	41	FSM	ENSG00000100345.23	ENST00000216181.11	7451	41	0	0	0	0	multi-exon	TRUE	canonical	3	844	junction_34	166.361862742036	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCGTGTCTGTAGCATT	-14	True	NA	-5	True	AATAAA	-16	NA	36387967	36281279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_92990.known	chr22	-	372	1	FSM	ENSG00000237668.1	ENST00000413110.1	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGATGTAATACACATAT	NA	False	NA	NA	False	NA	NA	NA	36421644	36421272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36421300_36421600
transcript_92999.known	chr22	-	736	4	FSM	ENSG00000100348.10	ENST00000487725.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	311.690373429929	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTCCCAGGATGTGTG	-18	True	NA	NA	False	NA	NA	NA	36481632	36467548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480749_36481563
transcript_93001.known	chr22	-	1280	4	FSM	ENSG00000100348.10	ENST00000416967.1	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	306.510467466719	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-20	True	NA	-14	True	AATAAA	-19	NA	36481634	36467045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480788_36481563
transcript_93002.known	chr22	-	912	4	FSM	ENSG00000100348.10	ENST00000403313.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	323.463547662896	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCATACGCCTTTCA	1	True	NA	NA	False	NA	NA	NA	36481340	36467590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481142
transcript_9302.known	chr1	+	1788	11	FSM	ENSG00000118298.12	ENST00000369111.9	1788	11	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_8	54.5945052180162	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	0	True	NA	28	True	ATTAAA	-15	NA	150257773	150265078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_93021.known	chr22	-	1336	4	FSM	ENSG00000100348.10	ENST00000216185.7	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_3	21.6487105081727	2922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	17	False	36481657	-14	True	AATAAA	-19	NA	36481640	36467045	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481563
transcript_93028.known	chr22	-	1880	15	FSM	ENSG00000100353.18	ENST00000216190.13	1880	15	0	0	0	0	multi-exon	TRUE	canonical	3	1215	junction_9	115.809220316018	4391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCGTCTGCCTGCATT	-7	True	NA	-20	True	AATAAA	-23	NA	36529166	36510854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36529075
transcript_9303.known	chr1	+	1251	8	FSM	ENSG00000118292.9	ENST00000369102.5	1251	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	151.465628888847	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	NA	False	NA	10	True	AATAAA	-16	NA	150268199	150280916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150268821_150272283_150272414_150272798_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_93051.nic	chr22	-	857	8	NIC	ENSG00000100360.15	novel	1073	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	2	86	junction_7	175.065468803379	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	13	False	NA	-8	True	AATAAA	-17	NA	36776139	36758210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673_36775795_36776030
transcript_93059.known	chr22	-	902	2	FSM	ENSG00000100360.15	ENST00000476548.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGTAGGTGCTATGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	36776256	36772402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36772722_36775673
transcript_93060.known	chr22	-	1073	7	FSM	ENSG00000100360.15	ENST00000433985.7	1073	7	0	0	0	0	multi-exon	FALSE	canonical	2	397	junction_3	76.9437023630481	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-18	True	NA	-8	True	AATAAA	-17	NA	36776119	36758210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673
transcript_93062.nic	chr22	-	703	5	NIC	ENSG00000100362.13	novel	595	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	11.7686022959398	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	1967	False	NA	-17	True	AATAAA	-15	NA	36817531	36800702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817355
transcript_93064.known	chr22	-	595	5	FSM	ENSG00000100362.13	ENST00000216200.9	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	16.0390149323454	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCAGGCCTGGTCAGGCA	19	False	NA	2	True	AATAAA	-34	NA	36819479	36800683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36819430
transcript_93065.known	chr22	-	550	4	FSM	ENSG00000100362.13	ENST00000417718.7	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.62466929133727	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-10	True	NA	-17	True	AATAAA	-15	NA	36817035	36800702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944
transcript_93067.known	chr22	-	1125	3	FSM	ENSG00000128311.14	ENST00000249042.8	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	44.5	1104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	-3	True	NA	-21	True	AATAAA	-16	NA	37019447	37010864	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37011326_37018137_37018754_37019399
transcript_93070.known	chr22	+	2116	3	FSM	ENSG00000128309.17	ENST00000397225.2	2116	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	399.5	980	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTGGGGCTGCCTCGGT	3214	False	NA	60	True	AATAAA	-23	NA	37023036	37029821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37023928_37024191_37024811_37029215
transcript_93071.known	chr22	+	1691	8	FSM	ENSG00000100379.18	ENST00000402077.8	1691	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	37.1368126949912	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCTGTTGCCCTCTTT	-5	True	NA	28	True	AATAAA	-19	NA	37051738	37063390	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37051950_37053099_37053209_37056319_37056412_37057397_37057494_37059312_37059439_37060822_37060923_37061538_37061630_37062524
transcript_93085.known	chr22	-	1647	4	FSM	ENSG00000133466.14	ENST00000397110.6	1647	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	7.93025150224688	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCAGACTGGTTCTTTC	12	True	NA	-2	True	ATTAAA	-20	NA	37188286	37180166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37180868_37182151_37182736_37185217_37185456_37188162
transcript_93086.known	chr22	-	2893	3	FSM	ENSG00000133466.14	ENST00000337843.7	2893	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	3	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGACTGGTTCTTTCT	-4	True	NA	-1	True	ATTAAA	-21	NA	37188247	37180165	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37182736_37185217_37185456_37188162
transcript_93088.known	chr22	-	688	6	FSM	ENSG00000133466.14	ENST00000497071.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.73286382647969	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTACCTTGTGTA	604	False	NA	-3	True	AATAAA	-16	NA	37199385	37190552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37190678_37190864_37190929_37191671_37191738_37195380_37195513_37197602_37197842_37199323
transcript_93089.nic	chr22	-	1577	8	NIC	ENSG00000128340.15	novel	1472	7	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	4.19912527334259	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGATATCGTGATTT	3905	False	NA	-15	True	AATAAA	-14	NA	37244461	37225269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113_37244203_37244289
transcript_93091.known	chr22	-	1472	7	FSM	ENSG00000128340.15	ENST00000249071.11	1472	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	3.43592135468138	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGATATCGTGATTT	-7	True	NA	-15	True	AATAAA	-14	NA	37244269	37225269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113
transcript_93094.known	chr22	-	2073	8	FSM	ENSG00000100060.18	ENST00000356998.8	2073	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	4.55801603815538	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	7	True	NA	-1	True	ATTAAA	-21	NA	37486384	37469062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
transcript_93095.known	chr22	-	2034	7	FSM	ENSG00000100060.18	ENST00000416983.7	2034	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.02619644270067	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	4	True	NA	-1	True	ATTAAA	-21	NA	37486387	37469062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485915
transcript_93097.nnic	chr22	+	2150	3	NNC	ENSG00000128283.7	novel	720	3	NA	NA	-724	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	66.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	-8	True	NA	17	True	ATTAAA	-20	NA	37559755	37569405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_37559867_37566071_37566813_37568107
transcript_93098.known	chr22	+	2148	3	FSM	ENSG00000128283.7	ENST00000249014.5	2148	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	3.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCCTGCAAGATGCTTG	-9	True	NA	17	True	ATTAAA	-20	NA	37560479	37569405	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37560589_37566071_37566813_37568107
transcript_93099.known	chr22	-	596	4	FSM	ENSG00000100079.7	ENST00000215886.6	596	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.4142135623731	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTCTGTCCTGGTTCTT	-2	True	NA	NA	False	AATAAA	-15	NA	37580087	37570247	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37570413_37570575_37570736_37571848_37571932_37579899
transcript_93102.known	chr22	+	2800	17	FSM	ENSG00000100083.19	ENST00000343632.9	2800	17	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	20.6131594800506	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	-21	True	NA	17	True	AATAAA	-18	NA	37608833	37633564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_93103.nic	chr22	+	2854	17	NIC	ENSG00000100083.19	novel	3205	18	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	63.498738914643	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	-11	True	NA	17	True	AATAAA	-18	NA	37609030	37633564	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_37609155_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_93115.known	chr22	+	1384	3	FSM	ENSG00000100083.19	ENST00000489772.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	35	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATAATGTACA	-25	True	NA	NA	False	AAAAAG	-7	NA	37608829	37618146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37608904_37614189_37614275_37616921
transcript_93119.known	chr22	+	3205	18	FSM	ENSG00000100083.19	ENST00000406772.5	3205	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	86.5686518775086	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCTGCTCTCGTGGCCC	-2	True	NA	16	True	AATAAA	-17	NA	37609039	37633563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37609357_37613032_37613192_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_93123.known	chr22	+	528	4	FSM	ENSG00000100097.12	ENST00000215909.10	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	16.0831174424198	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	-2	True	NA	15	True	AATAAA	-26	NA	37675635	37679802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37675712_37676985_37677066_37678482_37678655_37679602
transcript_93124.known	chr22	+	516	4	FSM	ENSG00000100097.12	ENST00000489315.5	516	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.861024887531	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	487	False	NA	15	True	AATAAA	-26	NA	37676124	37679802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37676189_37676985_37677066_37678482_37678655_37679602
transcript_93127.nnic	chr22	+	714	3	NNC	ENSG00000100097.12	novel	185	3	NA	NA	377	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	126	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	362	False	NA	15	True	AATAAA	-26	NA	37677375	37679802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_37677718_37678482_37678655_37679602
transcript_93129.known	chr22	+	637	4	FSM	ENSG00000100097.12	ENST00000425542.5	637	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	110.927403687677	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	19	False	NA	15	True	AATAAA	-26	NA	37675656	37679802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37675712_37676855_37677066_37678482_37678655_37679602
transcript_93130.known	chr22	+	546	3	FSM	ENSG00000100097.12	ENST00000472321.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	127	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	-15	True	NA	15	True	AATAAA	-26	NA	37676998	37679802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37677066_37678375_37678655_37679602
transcript_93135.known	chr22	+	903	7	FSM	ENSG00000273899.5	ENST00000611699.1	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	22.4530374089763	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	7	True	NA	12	True	ATTAAA	-14	NA	37686359	37693471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_93137.nnic	chr22	+	1324	7	NNC	ENSG00000273899.5	novel	813	5	NA	NA	213	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	104.18853103869	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	181	False	NA	12	True	ATTAAA	-14	NA	37686572	37693471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_37687110_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_93144.known	chr22	+	2830	6	FSM	ENSG00000273899.5	ENST00000359114.9	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	20.6842935581566	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	-10	True	NA	15	True	ATTAAA	-17	NA	37686342	37693474	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173
transcript_93151.known	chr22	+	632	5	FSM	ENSG00000273899.5	ENST00000468597.5	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	20.0546129356814	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCCAGTGATCCTCTG	-7	True	NA	NA	False	NA	NA	NA	37686345	37690900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696
transcript_93155.known	chr22	+	10085	24	FSM	ENSG00000100106.22	ENST00000644935.1	10085	24	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_10	166.698952134445	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAATACAGCAATTTA	18	True	NA	40	True	AATAAA	-17	NA	37697047	37776556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37697090_37697587_37697697_37701305_37701480_37710426_37710567_37713209_37713412_37715762_37715935_37723184_37726504_37733297_37733413_37734398_37735443_37738641_37738720_37740894_37741033_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
transcript_93156.known	chr22	+	2204	1	FSM	ENSG00000189060.6	ENST00000340857.4	2204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4713	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGGTGTATTTTTCCT	0	True	NA	17	True	AATAAA	-17	NA	37805228	37807432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37805200_37807400
transcript_93162.known	chr22	+	1473	9	FSM	ENSG00000100116.17	ENST00000248924.11	1473	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	32.3803084451029	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	1	True	NA	28	True	NA	NA	NA	37807933	37816897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_93163.nnic	chr22	+	1544	9	NNC	ENSG00000100116.17	novel	1473	9	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_7	112.706407870183	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	-28	True	NA	28	True	NA	NA	NA	37807904	37816897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815877_37816199_37816322_37816566
transcript_93170.nic	chr22	+	1351	8	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	117.84735890125	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	-8	True	NA	28	True	NA	NA	NA	37807924	37816897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_93182.known	chr22	+	1656	10	FSM	ENSG00000100116.17	ENST00000323205.10	1656	10	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_9	129.194465347952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCGTGGTGGCGTAT	-28	True	NA	5	True	ACTAAA	-12	NA	37807904	37817176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37808164_37809948_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566_37816726_37816928
transcript_93190.known	chr22	-	954	8	FSM	ENSG00000100124.15	ENST00000406423.5	954	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	29.6551609577249	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCCGCAGATGCCGTGG	7511	False	NA	NA	False	NA	NA	NA	37843882	37831824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37832018_37832636_37832745_37832957_37833083_37833158_37833207_37833683_37833756_37838499_37838594_37840186_37840235_37843616
transcript_93194.known	chr22	-	1140	1	FSM	ENSG00000100124.15	ENST00000609706.1	1140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGCCTTAGTTTAGCC	4	True	NA	-4	True	AATAAA	-19	NA	37849318	37848178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37848200_37849300
transcript_93195.known	chr22	+	1294	6	FSM	ENSG00000100129.18	ENST00000482600.5	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	2277	junction_1	178.582641933644	650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTCTCATTATTGTA	6872	False	NA	29	True	AGTAAA	-18	NA	37870164	37888631	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_93196.known	chr22	+	4710	16	FSM	ENSG00000100139.14	ENST00000215957.10	4710	16	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_6	12.5563618226866	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCTGATACTGTGTGT	-20	True	NA	NA	False	NA	NA	NA	37906296	37942822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937793_37940708
transcript_93197.known	chr22	-	1942	7	FSM	ENSG00000128346.11	ENST00000403305.6	1942	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGGCCCTGTAAATGGT	-15	True	NA	NA	False	NA	NA	NA	37953601	37943049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37944247_37944416_37944518_37945041_37945174_37947280_37947464_37951459_37951523_37953046_37953159_37953447
transcript_932.known	chr1	-	3163	12	FSM	ENSG00000078369.18	ENST00000378609.9	3163	12	0	0	0	0	multi-exon	FALSE	canonical	3	1627	junction_11	327.328025631226	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGGTGATTATTT	7	True	NA	-4	True	AATAAA	-19	NA	1891087	1785285	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
transcript_93203.known	chr22	+	584	5	FSM	ENSG00000100142.16	ENST00000470701.1	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	796.618596004387	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTTCCCCTCTGCTTAT	5	False	NA	43	True	AATAAA	-17	NA	37953726	37967801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37953861_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_93207.known	chr22	+	2070	5	FSM	ENSG00000100142.16	ENST00000442738.7	2070	5	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_4	86.9004459137006	12652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTCTGTTTTCTTA	7	True	NA	15	True	AATAAA	-16	NA	37953698	37969312	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_93208.known	chr22	+	615	5	FSM	ENSG00000100142.16	ENST00000483713.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	782.673742692317	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCCCTTCCCCTCTGCT	7	True	NA	40	True	AATAAA	-14	NA	37953698	37967798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098_37967171_37967624
transcript_93209.known	chr22	+	760	4	FSM	ENSG00000100142.16	ENST00000606538.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_3	34.6634613902818	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGCGGCAGAGCTG	19	True	NA	42	True	NA	NA	NA	37953710	37967560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098
transcript_93210.known	chr22	+	2058	13	FSM	ENSG00000100151.16	ENST00000356976.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	17.1917292776368	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	3	True	NA	28	True	AATAAA	-20	NA	38057403	38075701	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_93212.nic	chr22	-	740	2	ISM	ENSG00000100156.12	ENST00000320521.10	2091	5	2347	0	2155	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTATTCCTCCGCCCAG	7942	False	NA	NA	False	GATAAA	-20	NA	38081008	38078133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_38078705_38080839
transcript_93213.known	chr22	-	677	2	FSM	ENSG00000100156.12	ENST00000469516.5	677	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTATTCCTCCGCCCAG	4857	False	NA	NA	False	GATAAA	-20	NA	38084093	38078133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38078705_38083987
transcript_93216.nnic	chr22	-	1160	6	NIC	ENSG00000128298.18	novel	1865	9	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	11.6206712370672	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCGGCAGCAGGACTG	NA	False	NA	-17	True	AATAAA	-16	NA	38097831	38084899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38097031_38097179_38097690
transcript_93217.nic	chr22	-	1097	5	ISM	ENSG00000128298.18	ENST00000332536.10	1865	9	8810	248	5	0	3prime_fragment	FALSE	canonical	3	28	junction_4	4.60298815988049	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCGGCAGCAGGACTG	-22	True	NA	-17	True	AATAAA	-16	NA	38088972	38084899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38088747
transcript_93220.nic	chr22	-	742	2	ISM	ENSG00000128298.18	ENST00000681084.1	2024	4	3026	248	2987	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCGGCAGCAGGACTG	2999	False	NA	-17	True	AATAAA	-16	NA	38085951	38084899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_38085376_38085685
transcript_93221.known	chr22	-	3299	17	FSM	ENSG00000184381.20	ENST00000332509.8	3299	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	11.050311081594	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-17	True	NA	0	True	AATAAA	-20	NA	38181830	38111494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
transcript_93222.known	chr22	-	3171	17	FSM	ENSG00000184381.20	ENST00000663895.1	3171	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_16	9.85341787147993	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-13	True	NA	0	True	AATAAA	-20	NA	38181826	38111494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169468_38181783
transcript_93224.known	chr22	-	1770	15	FSM	ENSG00000283900.1	ENST00000400206.7	1770	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	503.691576345716	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	396	False	NA	-76	True	NA	NA	NA	38398522	38291917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336607_38336707_38361398_38361561_38380369_38380424_38380936_38380991_38398437
transcript_93229.nnic	chr22	-	1473	9	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	996	6	NA	NA	8241	0	multi-exon	FALSE	canonical	3	41	junction_1	530.490088856521	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTGCCTCTTTCAT	-20	True	NA	-2	True	ATTAAA	-18	NA	38336193	38297601	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_-_38297999_38298093_38298204_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_93230.known	chr22	-	1631	8	FSM	ENSG00000213923.13	ENST00000413574.6	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	395.477185285868	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	2633	False	NA	-4	True	AATAAA	-16	NA	38317411	38296204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_93231.nnic	chr22	-	1448	8	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	1631	8	NA	NA	8241	0	multi-exon	FALSE	canonical	3	44	junction_1	486.475915463994	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	-20	True	NA	-4	True	AATAAA	-16	NA	38336193	38296204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_93233.known	chr22	-	2127	8	FSM	ENSG00000213923.13	ENST00000405675.7	2127	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	394.474592441177	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	-7	True	NA	-5	True	AATAAA	-15	NA	38317439	38296205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38297156_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38317159
transcript_93234.nnic	chr22	-	1916	8	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	2127	8	NA	NA	8241	0	multi-exon	FALSE	canonical	3	47	junction_1	485.749326467125	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTGTTTCTTGCG	-20	True	NA	-5	True	AATAAA	-15	NA	38336193	38296205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_-_38297156_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_93252.known	chr22	-	574	5	FSM	ENSG00000244627.5	ENST00000407491.6	574	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	59.2299544149749	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGCGTGGTGGTGCATGC	1	True	NA	NA	False	AATACA	-8	NA	38398873	38344531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38344742_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_93254.known	chr22	-	974	5	FSM	ENSG00000244627.5	ENST00000457665.5	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.1877477344383	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAACTCCGTTCCCCC	58	False	NA	NA	False	NA	NA	NA	38398860	38350376	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38351000_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_9326.nnic	chr1	+	471	5	NNC	ENSG00000118292.9	novel	1251	8	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	151.577331748517	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	NA	False	NA	8	True	AATAAA	-14	NA	150272615	150280914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_150272753_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_93260.nnic	chr22	-	780	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	-12	-2410	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	56.7995378502325	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGTGTTTGCTGA	NA	False	NA	NA	False	AATAAA	-37	NA	38398941	38352786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_38353135_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_93270.known	chr22	-	792	5	FSM	ENSG00000244627.5	ENST00000455209.5	792	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	69.6289271782928	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAACTTTCAGATTATT	-3	True	NA	NA	False	NA	NA	NA	38398921	38368897	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38369380_38369985_38370046_38380369_38380424_38380936_38380991_38398779
transcript_93274.nnic	chr22	-	856	4	ISM	ENSG00000283900.1	ENST00000400206.7	1770	15	-242	69222	-242	-69222	5prime_fragment	FALSE	canonical	3	12	junction_3	58.8349858124871	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGACTCCGTCTCAAAA	154	False	NA	NA	False	NA	NA	NA	38398764	38361139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398437
transcript_93275.known	chr22	-	679	4	FSM	ENSG00000244627.5	ENST00000443658.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	23.6690139681023	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGACTCCGTCTCAAAA	-11	True	NA	NA	False	NA	NA	NA	38398929	38361139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398779
transcript_93283.known	chr22	-	468	3	FSM	ENSG00000244627.5	ENST00000454577.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	7.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACAGGGTTTCCAATT	-2	True	NA	NA	False	NA	NA	NA	38398920	38380150	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38380424_38380936_38380991_38398779
transcript_93284.known	chr22	-	6441	12	FSM	ENSG00000100201.23	ENST00000216019.11	6441	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	8.62343529944049	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCTGACTGGAAGAGAT	1374	False	NA	NA	False	AATATA	-11	NA	38506294	38485680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38486441_38487878_38492116_38493709_38493772_38494020_38494132_38494629_38494803_38494885_38495047_38495795_38495938_38498084_38498151_38498439_38498574_38499399_38499500_38501129_38501281_38505950
transcript_93287.known	chr22	+	1694	5	FSM	ENSG00000100196.11	ENST00000216014.9	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	13.7931142241337	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	5	True	NA	19	True	AATAAA	-21	NA	38468095	38483447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211_38481465_38482495
transcript_93292.known	chr22	+	931	4	FSM	ENSG00000100196.11	ENST00000409006.3	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	10.077477638554	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGGCCAATAGGTTAT	-13	True	NA	NA	False	AATAAA	-20	NA	38468077	38481635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211
transcript_93294.nnic	chr22	+	1589	4	NIC	ENSG00000100196.11	novel	1694	5	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	42.3188951756646	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	-49	True	NA	19	True	AATAAA	-21	NA	38468041	38483447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_38468325_38474522_38474624_38481211_38481465_38482495
transcript_93303.known	chr22	-	2269	14	FSM	ENSG00000100206.11	ENST00000216024.7	2269	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.3168461117557	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGGTGAAAATATGTAA	2	True	NA	1	True	AATAAA	-20	NA	38570183	38518947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38520090_38521607_38521725_38537591_38537653_38538294_38538410_38538538_38538613_38539320_38539413_38549924_38549998_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570042
transcript_93310.nic	chr22	-	2157	12	NIC	ENSG00000100206.11	novel	2269	14	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_11	6.58447962262975	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGGTGAAAATATGTAA	NA	False	NA	1	True	AATAAA	-20	NA	38570236	38518947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_38520090_38521607_38521725_38537591_38537653_38538294_38538410_38538538_38538613_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570042
transcript_93317.known	chr22	-	721	9	FSM	ENSG00000100206.11	ENST00000439567.5	721	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	10.5800519847494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATATCTTTAAAATAAAAT	7	True	NA	NA	False	NA	NA	NA	38570131	38538294	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38538410_38538538_38538613_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570053
transcript_93324.known	chr22	-	269	2	FSM	ENSG00000100206.11	ENST00000464842.1	269	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGATTTCTTTTT	-19	False	NA	-10	True	AATAAA	-22	NA	38570204	38569283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38569391_38570042
transcript_93328.known	chr22	+	1269	6	FSM	ENSG00000100211.11	ENST00000396811.6	1269	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	127.215722298779	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	-7	True	NA	9	True	ATTAAA	-10	NA	38656650	38673846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38656751_38665545_38665686_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_93343.known	chr22	-	738	2	FSM	ENSG00000228274.5	ENST00000412067.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGATGCCCAAGGCTTC	52	False	NA	NA	False	NA	NA	NA	38681787	38675813	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38676490_38681725
transcript_93344.known	chr22	-	786	2	FSM	ENSG00000228274.5	ENST00000431924.3	876	2	90	0	17	0	multi-exon	FALSE	canonical	3	7	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTAATCTGT	69	False	NA	NA	False	AATAAA	-21	NA	38681770	38667584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38668326_38681725
transcript_93345.known	chr22	+	1133	5	FSM	ENSG00000100211.11	ENST00000216029.8	1146	5	17	-4	4	4	multi-exon	FALSE	canonical	3	303	junction_1	16.768646337734	4259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGACCAAAGTGACTAA	-3	True	NA	17	True	ATTAAA	-18	NA	38656654	38673854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38656751_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_93346.known	chr22	-	1325	2	FSM	ENSG00000228274.5	ENST00000444381.1	1325	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTGCTTCTTAACGT	19	True	NA	NA	False	CATAAA	-21	NA	38681820	38670467	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38671698_38681725
transcript_93351.known	chr22	+	2031	4	FSM	ENSG00000100216.6	ENST00000216034.6	2031	4	0	0	0	0	multi-exon	FALSE	canonical	3	1237	junction_2	39.7520090337862	3493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAGACATCTTTTGAA	-5	True	NA	10	True	ATTAAA	-16	NA	38681956	38685421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38682096_38682322_38682442_38682878_38682997_38683766
transcript_93352.known	chr22	-	3648	4	FSM	ENSG00000100221.11	ENST00000216039.9	3648	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	4.64279609239471	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATTGCCAGCGTAAGTC	-1	True	NA	1	True	AATAAA	-28	NA	38700667	38685542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38688002_38688934_38689130_38689295_38689425_38699802
transcript_93354.known	chr22	+	4905	12	FSM	ENSG00000100226.16	ENST00000216044.10	4905	12	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_6	29.1680794620443	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAAGGCCTGACCCTTCT	-10	True	NA	27	True	AATAAA	-24	NA	38705943	38733587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38706148_38708844_38708957_38715906_38716088_38716651_38717001_38721741_38721866_38724296_38724412_38726005_38726151_38726257_38726441_38727212_38727349_38727982_38728162_38729461_38729663_38730611
transcript_93357.known	chr22	-	1474	4	FSM	ENSG00000100246.13	ENST00000216068.9	1474	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	6.79869268479038	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTACAGTCTCTTG	2	True	NA	-6	True	ATTAAA	-16	NA	38794143	38778507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38779614_38780925_38781010_38782662_38782871_38794067
transcript_93361.known	chr22	-	842	2	FSM	ENSG00000100246.13	ENST00000486019.1	842	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAAGCAGCCTTTCCCG	-3	True	NA	NA	False	NA	NA	NA	38794148	38778852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38779614_38794067
transcript_93362.known	chr22	-	758	2	FSM	ENSG00000100246.13	ENST00000475512.2	758	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGTCATCAGTGTAG	13	True	NA	NA	False	GATAAA	-18	NA	38794132	38785304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38785998_38794067
transcript_93363.known	chr22	+	491	1	FSM	ENSG00000272669.1	ENST00000609212.1	491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCATTTGATAGTGTGT	NA	False	NA	5	True	AATAAA	-17	NA	38742624	38743115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38742600_38743100
transcript_93364.known	chr22	-	6052	5	FSM	ENSG00000183741.12	ENST00000407418.8	6052	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	3.69966214673719	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTGGCTTTTCAAA	9	True	NA	26	True	NA	NA	NA	38872216	38861421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_93367.known	chr22	+	1590	8	FSM	ENSG00000179750.16	ENST00000333467.4	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	17.4998542267981	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTGTAGATGTCTTT	-5	True	NA	25	True	AATAAA	-39	NA	38982346	38992779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033_38992150_38992430
transcript_93371.known	chr22	+	1844	7	FSM	ENSG00000179750.16	ENST00000402182.7	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	18.6048082196213	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGGACCTGTAGCTGG	2	True	NA	50	True	NA	NA	NA	38982398	38992804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033
transcript_93372.known	chr22	+	1359	7	FSM	ENSG00000179750.16	ENST00000335760.9	1359	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.3368982937785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTCCACAAACACTAGC	9	True	NA	7	True	AATAAA	-21	NA	38982405	38992761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38991331_38991627_38992033_38992150_38992430
transcript_93379.known	chr22	-	691	5	FSM	ENSG00000249310.2	ENST00000513758.2	691	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	7.79021822544144	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCGTAATCATAGATGCG	NA	False	NA	NA	False	NA	NA	NA	38998209	38991558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38991619_38992397_38992582_38992937_38993004_38997480_38997738_38998085
transcript_93382.nnic	chr22	-	1307	4	NIC	ENSG00000249310.2	novel	691	5	NA	NA	-68	614	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	6.18241233033047	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAGCATTTGGAGCCC	NA	False	NA	NA	False	ATTAAA	-21	NA	38998277	38990944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_38991619_38992397_38992582_38997480_38997738_38998085
transcript_93390.known	chr22	+	1056	3	FSM	ENSG00000244509.4	ENST00000428892.1	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	137	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGGAGTGAACAGAGATC	3	True	NA	-84	True	NA	NA	NA	39014261	39018926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39014380_39017765_39018046_39018268
transcript_93395.known	chr22	+	2644	4	FSM	ENSG00000244509.4	ENST00000361441.5	2644	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	22.573337271116	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGTGTAATTTGTAGG	-2	True	NA	12	True	AATAAA	-19	NA	39014256	39020352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39014380_39015594_39015752_39017765_39018046_39018268
transcript_93397.known	chr22	+	616	3	FSM	ENSG00000128394.17	ENST00000381565.2	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	40.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGCCTCTGGGAAGTC	238	False	NA	7	True	AATAAA	-20	NA	39040856	39044423	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39040978_39042936_39043091_39044082
transcript_93399.nnic	chr22	+	784	3	NNC	ENSG00000128394.17	novel	616	3	NA	NA	6	-372	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	46.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGAGCGGTGTATGGT	7997	False	NA	NA	False	AAAAAG	-1	NA	39040609	39044051	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_39040978_39042936_39043313_39044011
transcript_93402.known	chr22	+	1564	8	FSM	ENSG00000239713.9	ENST00000407997.4	1564	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	20.3800622858594	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	-3	True	NA	14	True	AATAAA	-24	NA	39077274	39087743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39077379_39078931_39079086_39080932_39081228_39081470_39081586_39083730_39083885_39086278_39086568_39087010_39087127_39087406
transcript_93403.nic	chr22	+	1415	7	NIC	ENSG00000239713.9	novel	1564	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	11.8415464455544	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	-8	True	NA	14	True	AATAAA	-24	NA	39077269	39087743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_39077379_39080932_39081228_39081470_39081586_39083730_39083885_39086278_39086568_39087010_39087127_39087406
transcript_93407.nnic	chr22	+	1010	5	NIC	ENSG00000239713.9	novel	1564	8	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	31.7204586978184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	-13	True	NA	14	True	AATAAA	-24	NA	39077264	39087743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_39077379_39078931_39079086_39086278_39086568_39087010_39087127_39087406
transcript_93408.known	chr22	+	1029	5	FSM	ENSG00000100298.16	ENST00000442487.8	1029	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	0	True	NA	NA	False	AATAAA	-18	NA	39097243	39104067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39097344_39100271_39100429_39101236_39101505_39101917_39102043_39103688
transcript_93409.known	chr22	+	1046	5	FSM	ENSG00000100298.16	ENST00000348946.8	1046	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	13	False	NA	NA	False	AATAAA	-18	NA	39097223	39104067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39097344_39100271_39100429_39101236_39101505_39101917_39102043_39103691
transcript_93410.nic	chr22	+	827	3	ISM	ENSG00000100298.16	ENST00000442487.8	1029	5	3938	0	903	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	3894	False	NA	NA	False	AATAAA	-18	NA	39101181	39104067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_39101505_39101917_39102043_39103688
transcript_93415.known	chr22	-	3728	7	FSM	ENSG00000100311.17	ENST00000331163.11	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.13991411612474	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGGTCTCCATAGAGG	-3	True	NA	NA	False	NA	NA	NA	39244982	39223358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39225314_39225694_39225848_39230083_39230229_39231621_39231828_39233434_39233525_39235777_39235875_39243900
transcript_9343.known	chr1	-	1730	7	FSM	ENSG00000117362.13	ENST00000369109.8	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	88.706757853553	1646	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-29	True	NA	-21	True	AATAAA	-14	NA	150269016	150265403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_9344.known	chr1	+	418	5	FSM	ENSG00000118292.9	ENST00000369098.3	418	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	111.918217909329	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	-13	True	NA	8	True	AATAAA	-14	NA	150272779	150280914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_9345.known	chr1	+	509	6	FSM	ENSG00000118292.9	ENST00000369099.8	509	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	124.425720813665	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	-3	True	NA	10	True	AATAAA	-16	NA	150272789	150280916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_93465.known	chr22	-	2108	10	FSM	ENSG00000100316.16	ENST00000465618.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	14203.5775774979	15893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	NA	False	NA	-4	True	AATAAA	-17	NA	39320389	39312883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39317022_39317460_39317630_39318399_39318593_39319726
transcript_93477.known	chr22	-	1296	10	FSM	ENSG00000100316.16	ENST00000216146.9	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	22032	junction_9	4762.82577188515	256166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	0	True	NA	-2	True	AATAAA	-19	NA	39319623	39312881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319594
transcript_93478.known	chr22	-	1205	8	FSM	ENSG00000100316.16	ENST00000402527.5	1205	8	0	0	0	0	multi-exon	FALSE	canonical	3	1109	junction_7	11867.3652716092	1610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACCAATGACTTTGTCA	0	True	NA	NA	False	NA	NA	NA	39319623	39313706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319389
transcript_93479.known	chr22	-	616	2	FSM	ENSG00000100316.16	ENST00000464182.5	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	26959	junction_1	0	4265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	6111	False	NA	-4	True	AATAAA	-17	NA	39313705	39312883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39312985_39313190
transcript_93480.known	chr22	-	1289	9	FSM	ENSG00000100316.16	ENST00000401609.5	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	26959	junction_1	3186.32907659818	92629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	1202	False	NA	-2	True	AATAAA	-19	NA	39318614	39312881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399
transcript_93481.known	chr22	-	523	2	FSM	ENSG00000100316.16	ENST00000473638.5	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	35964	junction_1	0	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	6087	False	NA	-4	True	AATAAA	-17	NA	39313729	39312883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39313311_39313633
transcript_93482.known	chr22	-	827	3	FSM	ENSG00000100316.16	ENST00000484615.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	22032	junction_2	6561	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTAACCTTGTGGACC	167	False	NA	NA	False	NA	NA	NA	39319649	39317050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39317630_39318399_39318593_39319594
transcript_93487.known	chr22	+	1361	4	FSM	ENSG00000100321.15	ENST00000318801.8	1361	4	0	0	0	0	multi-exon	TRUE	canonical	3	547	junction_3	31.6684210040363	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCATTCTTCTCTCCA	65	False	NA	30	True	AATAAA	-31	NA	39349924	39378389	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39377597
transcript_93488.known	chr22	+	928	4	FSM	ENSG00000100321.15	ENST00000415332.1	928	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	272.178046302212	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	16	True	NA	18	True	AGTAAA	-14	NA	39349986	39377911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39350110_39374315_39374661_39376051_39376198_39377597
transcript_93489.known	chr22	+	4383	4	FSM	ENSG00000100321.15	ENST00000328933.10	4383	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	248.033599874426	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTGCAAGTGTGTC	20	True	NA	19	True	AATAAA	-19	NA	39349990	39385575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39381695
transcript_93491.known	chr22	+	3198	11	FSM	ENSG00000100324.14	ENST00000216160.11	3198	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	8.44748483277715	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCTGTTGCTCATGTTT	5	True	NA	15	True	AATAAA	-28	NA	39399779	39431882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39430014
transcript_93492.known	chr22	+	1660	11	FSM	ENSG00000100324.14	ENST00000331454.3	1660	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	26.9794366138361	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTGAGCTCAGGGCTCT	9	True	NA	NA	False	NA	NA	NA	39399783	39436823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39436489
transcript_93494.known	chr22	+	3797	7	FSM	ENSG00000100335.15	ENST00000404569.5	3797	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	70.1983301479142	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATGCCTGAGTACCAT	30	False	NA	NA	False	NA	NA	NA	39502376	39516178	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39502438_39504202_39504535_39509421_39509572_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_93496.known	chr22	+	5688	6	FSM	ENSG00000100335.15	ENST00000325301.7	5688	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	24.6219414344198	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGACTTGTGTGTGTCG	-1	True	NA	17	True	AATAAA	-17	NA	39502289	39518132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_93498.known	chr22	+	3838	6	FSM	ENSG00000100335.15	ENST00000433117.6	3838	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	46.9535941116332	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCATCTCTGACCAAAT	11	True	NA	7	True	ATTAAA	-20	NA	39502301	39516380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512317_39512495_39513516
transcript_93500.known	chr22	+	1275	3	FSM	ENSG00000128272.18	ENST00000674835.2	1275	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	233	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATAGTCAGGAGCGT	40	False	NA	-44	True	AAGAAA	-13	NA	39520603	39522602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39520752_39521374_39521672_39521772
transcript_93502.known	chr22	+	1243	3	FSM	ENSG00000128272.18	ENST00000674568.2	1243	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	233	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATAGTCAGGAGCGT	15	False	NA	-44	True	AAGAAA	-13	NA	39520578	39522602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39520752_39521431_39521672_39521772
transcript_93503.known	chr22	+	1004	2	FSM	ENSG00000128272.18	ENST00000680446.1	1004	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATAGTCAGGAGCGT	14	False	NA	-44	True	AAGAAA	-13	NA	39520577	39522602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39520752_39521772
transcript_93504.known	chr22	+	1910	4	FSM	ENSG00000128272.18	ENST00000404241.6	1910	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	207.079694803716	9931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	NA	False	NA	37	True	AATAAA	-17	NA	39519694	39522683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39519802_39520177_39520752_39521353_39521672_39521772
transcript_93505.known	chr22	+	2019	2	FSM	ENSG00000128272.18	ENST00000337304.2	2019	2	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	0	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	0	True	NA	37	True	AATAAA	-17	NA	39520563	39522683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39521672_39521772
transcript_93506.known	chr22	+	1486	3	FSM	ENSG00000128272.18	ENST00000396680.3	1486	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	233	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTAGGGAAAGTACT	12	False	NA	22	True	AATAAA	-2	NA	39520575	39522668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39520752_39521257_39521672_39521772
transcript_93512.known	chr22	-	820	4	FSM	ENSG00000187051.9	ENST00000334678.8	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_3	121.282956574927	4456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	8	True	NA	-6	True	AATAAA	-14	NA	39532748	39529092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39529624_39529819_39529918_39532394_39532524_39532686
transcript_93513.known	chr22	-	861	5	FSM	ENSG00000187051.9	ENST00000420879.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	365.437751197109	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGCTCCAGGAGTAGG	-5	True	NA	-69	True	NA	NA	NA	39532761	39529155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39529624_39529819_39529918_39530463_39530555_39532394_39532524_39532686
transcript_93515.nic	chr22	+	929	2	ISM	ENSG00000133477.17	ENST00000473717.1	1917	5	11863	0	11863	0	3prime_fragment	FALSE	canonical	3	76	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGGGATCCCAAGTTC	NA	False	NA	2	True	AATAAA	-21	NA	40021550	40030031	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40021964_40029515
transcript_93516.known	chr22	+	17933	21	FSM	ENSG00000100354.21	ENST00000335727.13	17933	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.0838641081295	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATTGTGGTTTCCTG	12	False	NA	7	True	AATAAA	-20	NA	40177941	40335808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_9352.known	chr1	+	1179	6	FSM	ENSG00000159208.16	ENST00000369094.5	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	20.2049498885793	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-16	True	NA	20	True	ATTAAA	-21	NA	150282542	150287093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150282619_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_93522.nic	chr22	+	557	5	ISM	ENSG00000100354.21	ENST00000301923.13	15958	24	-95	89746	-95	-301	5prime_fragment	FALSE	canonical	1	4	junction_4	5.40254569624358	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAGGATAAAAAG	340	False	NA	37	True	AAGAAA	-31	NA	40044721	40246061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114_40156183_40246014
transcript_93526.nic	chr22	+	1583	4	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-34	72754	-34	16692	5prime_fragment	FALSE	canonical	3	41	junction_3	4.78423336480244	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTGAGAGTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	40177890	40263054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831
transcript_93527.nic	chr22	+	893	3	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-34	84075	-34	5371	5prime_fragment	FALSE	canonical	3	43	junction_2	4.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGGGTCATGATTGTGA	NA	False	NA	NA	False	AAAAAG	-1	NA	40177890	40251733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40178141_40246014_40246103_40251178
transcript_93528.known	chr22	+	564	2	FSM	ENSG00000100354.21	ENST00000489500.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTAGAGATGGGG	-5	True	NA	NA	False	NA	NA	NA	40177924	40246362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40178141_40246014
transcript_93529.known	chr22	+	3444	24	FSM	ENSG00000100354.21	ENST00000402203.5	3444	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.0384203829655	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAGAGAAAAAAAGGTGGG	13	False	NA	NA	False	AATAAA	-27	NA	40045473	40323360	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40045589_40117054_40117129_40125771_40125863_40156114_40156183_40246014_40246103_40251178_40251201_40261831_40262174_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_93530.known	chr22	+	415	4	FSM	ENSG00000100354.21	ENST00000441751.5	415	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	4.32049379893857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCACAGTTTATTTAA	-11	True	NA	NA	False	AAGAAA	-8	NA	40044816	40156182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114
transcript_93536.known	chr22	+	2986	22	FSM	ENSG00000100359.21	ENST00000248929.14	2986	22	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_3	43.74000695721	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTGTGTTTATTTT	-29	True	NA	12	True	NA	NA	NA	40370593	40410289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_9355.known	chr1	+	771	6	FSM	ENSG00000159208.16	ENST00000447007.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	26.9027879596149	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACAGCATCTCCTGTCA	-16	True	NA	NA	False	NA	NA	NA	150282542	150286737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150282619_150283513_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_9357.known	chr1	+	1433	6	FSM	ENSG00000159208.16	ENST00000369095.5	1433	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.7812460746684	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-16	True	NA	20	True	ATTAAA	-21	NA	150282542	150287093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150282619_150283207_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_93570.known	chr22	+	4359	13	FSM	ENSG00000239900.14	ENST00000623063.3	4359	13	0	0	0	0	multi-exon	FALSE	canonical	3	1117	junction_8	81.7015231736159	5105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTGGTCTGCGTGTTCAC	-1	True	NA	34	True	NA	NA	NA	40346499	40369367	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_93571.known	chr22	+	1808	12	FSM	ENSG00000239900.14	ENST00000342312.9	1808	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_11	320.692716134648	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAACCCTGATGTGAC	2	True	NA	NA	False	AGTAAA	-23	NA	40346502	40366996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435
transcript_93572.known	chr22	+	1336	10	FSM	ENSG00000239900.14	ENST00000623632.4	1336	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	388.143571502563	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	NA	False	NA	-16	True	NA	NA	NA	40346460	40366614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40364275_40364366_40364879_40365057_40366435
transcript_93573.known	chr22	+	4372	12	FSM	ENSG00000239900.14	ENST00000679723.1	4372	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	354.030838643675	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAAAATATACATTCAT	-1	True	NA	92	True	ATTAAA	-17	NA	40346499	40369425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_93574.known	chr22	+	3278	12	FSM	ENSG00000239900.14	ENST00000681159.1	3278	12	0	0	0	0	multi-exon	FALSE	canonical	3	1117	junction_8	83.0086125174136	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATAAGTGATGAAGTTTG	-1	True	NA	NA	False	NA	NA	NA	40346499	40366941	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40363072_40364275_40364366_40364879_40365057_40366435
transcript_93575.known	chr22	+	2123	13	FSM	ENSG00000239900.14	ENST00000680444.1	2123	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	345.234903926137	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACTACAGTAAATACTTA	-10	True	NA	NA	False	NA	NA	NA	40346513	40366960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361087_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_93576.known	chr22	+	1805	11	FSM	ENSG00000239900.14	ENST00000623287.4	1805	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	373.234631297794	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	40346529	40366968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_93577.known	chr22	+	1682	13	FSM	ENSG00000239900.14	ENST00000637666.2	1682	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	435.999681447386	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	-1	True	NA	NA	False	NA	NA	NA	40346499	40367837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435_40366499_40367468
transcript_93578.known	chr22	+	1859	14	FSM	ENSG00000239900.14	ENST00000680978.1	1859	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	332.83805611383	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	-1	True	NA	NA	False	NA	NA	NA	40346499	40367837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40367468
transcript_93579.known	chr22	+	1620	13	FSM	ENSG00000239900.14	ENST00000216194.11	1620	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	461.056576427087	1521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	4	True	NA	-16	True	NA	NA	NA	40346527	40366614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353332_40353420_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_93580.known	chr22	+	4563	31	FSM	ENSG00000284431.1	ENST00000639722.1	4563	31	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	428.41090866908	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTAGGCTCCTGGCCTCTTT	5	True	NA	-33	True	NA	NA	NA	40346528	40410054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40348396_40348647_40349831_40350036_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40409373_40409464_40409526_40409681
transcript_93581.known	chr22	+	260	2	FSM	ENSG00000172912.4	ENST00000312310.3	260	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAACTGGCTCCACCCCA	NA	False	NA	NA	False	NA	NA	NA	40569285	40569895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40569433_40569782
transcript_93582.known	chr22	+	2851	2	FSM	ENSG00000128285.5	ENST00000249016.5	2115	2	-734	-2	-523	2	multi-exon	FALSE	canonical	2	8	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGGATGTTCTTGTG	NA	False	NA	19	True	AATAAA	-29	NA	40678749	40682814	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40679735_40680948
transcript_93596.known	chr22	-	2226	9	FSM	ENSG00000100372.15	ENST00000435456.7	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_6	23.1378342763535	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	11	True	NA	-2	True	ATTAAA	-18	NA	40819346	40769629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40794513_40794581_40799022_40799084_40819194
transcript_93597.known	chr22	-	2058	8	FSM	ENSG00000100372.15	ENST00000263255.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	139.293992427996	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	27	True	NA	-2	True	ATTAAA	-18	NA	40819330	40769629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40794513_40794581_40799022_40799084_40819194
transcript_93598.known	chr22	-	1243	7	FSM	ENSG00000100372.15	ENST00000447566.5	1243	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	153.042205507718	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTTCTCTTTCCCTG	7	True	NA	35	True	AATATA	-1	NA	40819350	40770488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40819194
transcript_936.known	chr1	-	3145	11	FSM	ENSG00000078369.18	ENST00000610897.4	3145	11	0	0	0	0	multi-exon	TRUE	canonical	3	386	junction_10	664.31655857731	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-23	True	NA	-3	True	AATAAA	-20	NA	1891117	1785284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1890819
transcript_9360.known	chr1	+	838	6	FSM	ENSG00000159208.16	ENST00000417398.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	44.3828795821091	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCTGGAGAGGGTCCTC	213	False	NA	NA	False	NA	NA	NA	150282771	150286776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150282824_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_93607.known	chr22	-	3212	12	FSM	ENSG00000100380.15	ENST00000216218.8	3212	12	0	0	0	0	multi-exon	FALSE	canonical	3	1875	junction_3	83.4618733166268	5367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAAACCAGAAATGTT	8	True	NA	-13	True	AATATA	-22	NA	40856639	40824534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
transcript_93610.known	chr22	+	7938	10	FSM	ENSG00000196236.13	ENST00000357137.9	7938	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	7.55718936583642	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	-4	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_93617.nnic	chr22	+	1181	5	NNC	ENSG00000196236.13	novel	7938	10	NA	NA	-20	6768	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	13.865424623862	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGTTCAAGTCTCTTT	-2	True	NA	NA	False	NA	NA	NA	40857056	40888692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40888428
transcript_93619.nic	chr22	+	1242	4	ISM	ENSG00000196236.13	ENST00000357137.9	7938	10	-91	45975	-20	4916	5prime_fragment	FALSE	canonical	3	38	junction_2	3.29983164553722	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAACAAGAAAAAAAGAAAAA	-2	True	NA	NA	False	NA	NA	NA	40857056	40886840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312
transcript_93621.known	chr22	+	1418	3	FSM	ENSG00000196236.13	ENST00000482652.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7.5	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACTGTATAATTATTG	-10	True	NA	12	True	ATTAAA	-25	NA	40857096	40862770	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40857246_40860677_40860794_40861617
transcript_93625.nnic	chr22	+	399	2	NIC	ENSG00000196236.13	novel	1418	3	NA	NA	-18	-941	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCGTATGCCTCAGCTA	0	True	NA	18	True	CATAAA	-26	NA	40857058	40861829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_40857246_40861617
transcript_93626.nnic	chr22	+	1342	2	NIC	ENSG00000196236.13	novel	1418	3	NA	NA	-18	2	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGTATAATTATTGAT	0	True	NA	14	True	ATTAAA	-27	NA	40857058	40862772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_40857246_40861617
transcript_93627.known	chr22	+	2737	11	FSM	ENSG00000196236.13	ENST00000428799.1	2737	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	14.6082168658601	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCATCTTTTCTCTTC	24	True	NA	13	True	AATAAA	-18	NA	40857130	40927505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40857246_40868998_40869116_40870047_40870140_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_9363.nic	chr1	+	1133	5	NIC	ENSG00000159208.16	novel	1179	6	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_2	38.8997107958401	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	9720	False	NA	20	True	ATTAAA	-21	NA	150282512	150287093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150282619_150283461_150283634_150284425_150284505_150284596_150284709_150286429
transcript_93647.known	chr22	+	582	1	FSM	ENSG00000237214.3	ENST00000418783.1	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGCCCACCTGTCCCTCCT	56	False	NA	-78	True	GGGGCT	-28	NA	41064051	41064633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41064100_41064600
transcript_93655.known	chr22	+	1952	1	FSM	ENSG00000100393.14	ENST00000635552.1	1952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAACAAAAAAAA	9423	False	NA	NA	False	NA	NA	NA	41158467	41160419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41158500_41160400
transcript_93656.known	chr22	+	3189	17	FSM	ENSG00000100395.15	ENST00000216237.10	3189	17	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_3	24.4648184900277	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	-10	True	NA	13	True	ATTAAA	-17	NA	41205311	41231271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
transcript_93661.known	chr22	-	2248	5	FSM	ENSG00000100399.16	ENST00000417999.5	2248	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.08220700148449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGGTTGTATTTAGGTAA	1374	False	NA	NA	False	AATAAA	-20	NA	41239621	41229509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41229731_41235144_41235197_41236564_41236651_41237175_41238886_41239442
transcript_93662.known	chr22	-	2530	6	FSM	ENSG00000100399.16	ENST00000216241.14	2530	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.78567765543682	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGGGTTGTATTTAGG	0	True	NA	NA	False	AATAAA	-17	NA	41240931	41229512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41229731_41235144_41235344_41236483_41236651_41237175_41238886_41239442_41239621_41240873
transcript_93665.nnic	chr22	-	3282	17	NIC	ENSG00000100401.20	novel	3469	17	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_16	297.797750159399	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-23	True	NA	-21	True	AATAAA	-18	NA	41286220	41245610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41284900_41285154_41285985
transcript_93668.known	chr22	-	3828	16	FSM	ENSG00000100401.20	ENST00000356244.8	3828	16	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_15	75.9893559797833	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATGTATTAATATAT	10	True	NA	-3	True	CATAAA	-17	NA	41286187	41244778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285985
transcript_93669.nnic	chr22	-	2930	16	NNC	ENSG00000100401.20	novel	3469	17	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_15	223.788729733102	391	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-24	True	NA	-21	True	AATAAA	-18	NA	41286221	41245610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41286085
transcript_93674.nic	chr22	-	2921	15	NIC	ENSG00000100401.20	novel	3828	16	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_10	241.322387892129	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	NA	False	NA	-21	True	AATAAA	-18	NA	41286247	41245610	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285985
transcript_93681.nic	chr22	+	1543	9	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-26	20509	-26	2795	5prime_fragment	FALSE	canonical	3	24	junction_4	5.82961190818051	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAAGCTGCACAATGT	-4	True	NA	NA	False	NA	NA	NA	41301498	41339638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000
transcript_93687.nic	chr22	+	2353	5	ISM	ENSG00000100403.12	ENST00000486331.1	5262	7	-163	7797	27	-7797	5prime_fragment	FALSE	canonical	3	24	junction_4	6.44204936336256	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAATTAGCTGGGC	-11	True	NA	NA	False	AATACA	-15	NA	41301551	41329046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205
transcript_93689.known	chr22	+	5906	23	FSM	ENSG00000100403.12	ENST00000352645.5	5906	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_17	5.50975843540612	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCCCCGAGATGTCA	-38	True	NA	19	True	AATAAA	-15	NA	41301524	41360147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002_41346209_41348066_41348168_41349119_41349302_41351560_41351647_41355468_41355603_41355756_41355863_41355953_41356063_41356342_41356477_41356644_41356809_41357176
transcript_93692.known	chr22	+	2734	18	FSM	ENSG00000100412.17	ENST00000216254.9	2734	18	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_14	40.2659841673944	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGTTCTGTGAGTGAT	-10	True	NA	17	True	AAAACA	-15	NA	41469116	41528974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_93695.known	chr22	+	1460	10	FSM	ENSG00000100412.17	ENST00000466237.2	1460	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_9	123.864123085155	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAAGAGATTTCTA	-10	True	NA	19	True	AATAAA	-32	NA	41469116	41521590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41521298
transcript_9371.known	chr1	+	2011	5	FSM	ENSG00000159208.16	ENST00000290363.6	2011	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	4.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	-5	True	NA	20	True	ATTAAA	-21	NA	150282553	150287093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_93712.known	chr22	-	292	4	FSM	ENSG00000100410.8	ENST00000491254.1	292	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	314.007430909949	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACGCAAAAAATACGGCT	182	False	NA	NA	False	NA	NA	NA	41468499	41460431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468454
transcript_93715.known	chr22	-	1053	4	FSM	ENSG00000100410.8	ENST00000216252.4	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_3	17.0163320241336	8042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTCCCCATTTAACT	-11	True	NA	-22	True	AATAAA	-22	NA	41468692	41459716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468601
transcript_93716.known	chr22	+	644	4	FSM	ENSG00000100412.17	ENST00000478010.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_3	31.0519278342299	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACCTGTCGAGGCTGCCG	NA	False	NA	3	True	ATTAAA	-17	NA	41508014	41516123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41508050_41511875_41511969_41515376_41515536_41515766
transcript_93717.known	chr22	-	365	2	FSM	ENSG00000286491.2	ENST00000664614.2	399	2	27	7	27	-7	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGGTGGAGTGGTACGT	3	True	NA	NA	False	AATAAA	-14	NA	41560905	41551709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41551889_41560719
transcript_93727.known	chr22	+	2530	4	FSM	ENSG00000172346.15	ENST00000306149.12	2530	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.24264068711928	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCCTGAAGCTGCCTCT	7	True	NA	13	True	AATAAA	-19	NA	41561009	41576666	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41561184_41571842_41572142_41573654_41573778_41574732
transcript_93728.known	chr22	-	1242	8	FSM	ENSG00000100417.12	ENST00000216259.8	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	16.2279677956148	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-19	True	NA	NA	False	ATTAAA	-15	NA	41589840	41576899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584280_41584373_41584526_41584604_41586075_41586194_41589718
transcript_93729.known	chr22	-	1405	7	FSM	ENSG00000100417.12	ENST00000485648.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	10.2252411001186	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTTTGTCACAGTATT	3	True	NA	NA	False	NA	NA	NA	41589818	41576936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589718
transcript_93730.known	chr22	-	3780	6	FSM	ENSG00000100418.8	ENST00000263256.7	3780	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	10.0876161703348	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	12	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_93736.known	chr22	+	2200	13	FSM	ENSG00000196419.13	ENST00000405878.5	2200	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1504.59941835766	3287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	-4	True	NA	14	True	AATAAA	-20	NA	41621460	41664039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41621592_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_93741.known	chr22	+	2709	12	FSM	ENSG00000196419.13	ENST00000359308.8	2709	12	0	0	0	0	multi-exon	FALSE	canonical	3	4792	junction_3	351.060753848336	3412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	51	False	NA	14	True	AATAAA	-20	NA	41621349	41664039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_93742.known	chr22	+	2122	13	FSM	ENSG00000196419.13	ENST00000360079.8	2122	13	0	0	0	0	multi-exon	FALSE	canonical	3	4455	junction_1	410.280053405259	12789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTCTTTTGTGTGAAG	-4	True	NA	16	True	AATAAA	-22	NA	41621294	41664041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_93743.known	chr22	+	2006	13	FSM	ENSG00000196419.13	ENST00000402580.7	2006	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1474.5731091291	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	-4	True	NA	23	True	AATAAA	-29	NA	41621294	41664048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636235_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_93744.known	chr22	+	1958	11	FSM	ENSG00000196419.13	ENST00000405506.2	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	1531.3357861684	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATATACTGTTCTTTTG	-1	True	NA	9	True	AATAAA	-15	NA	41621982	41664034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_93753.known	chr22	-	640	2	FSM	ENSG00000100138.15	ENST00000469522.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGATGCTTGGTACAGA	-13	True	NA	-22	True	AATAAA	-17	NA	41688847	41687741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41688328_41688793
transcript_93754.known	chr22	-	1458	3	FSM	ENSG00000100138.15	ENST00000401959.6	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	1846	junction_2	328.5	14201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCAGTGCCTGATTCT	13	True	NA	-7	True	AATAAA	-21	NA	41688867	41673932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41675196_41680243_41680365_41688793
transcript_93755.known	chr22	-	1036	4	FSM	ENSG00000100138.15	ENST00000648674.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1033.91951115914	3090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTTCCAGCTTTCAG	-15	True	NA	-115	True	NA	NA	NA	41688895	41674614	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41675196_41680243_41680365_41682355_41682588_41688793
transcript_93756.known	chr22	+	2286	5	FSM	ENSG00000184208.12	ENST00000660688.1	2286	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.8541390362025	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTGGGCCCTGTGGTGTT	20	True	NA	-6	True	AATAAA	-6	NA	41688983	41698127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41689305_41690783_41690844_41693462_41693852_41693937_41694105_41696778
transcript_93760.nnic	chr22	+	1410	8	NNC	ENSG00000100147.14	novel	7135	7	NA	NA	-62	406	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.8194213880449	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCTGGTGGGGACACTG	NA	False	NA	12	True	AATAAA	-25	NA	41800616	41826299	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_41800767_41800998_41801077_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
transcript_93761.known	chr22	+	7135	7	FSM	ENSG00000100147.14	ENST00000255784.6	7135	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	6.42045342808607	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGATCCCATGGTA	0	True	NA	19	True	AATAAA	-20	NA	41800678	41832164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41800767_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
transcript_93775.known	chr22	-	938	6	FSM	ENSG00000100162.15	ENST00000215980.10	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_3	43.9909081515715	3420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-7	True	NA	-21	True	AAAAAG	-12	NA	41947152	41938736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_93776.known	chr22	-	818	5	FSM	ENSG00000100162.15	ENST00000407253.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	192.40500903043	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAATCACTGGTCTC	9	True	NA	-33	True	NA	NA	NA	41947136	41938748	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_93777.known	chr22	-	1002	5	FSM	ENSG00000100162.15	ENST00000402338.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_3	49.103844045044	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	452	False	NA	-21	True	AAAAAG	-12	NA	41946693	41938736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416
transcript_93778.known	chr22	-	905	4	FSM	ENSG00000100162.15	ENST00000404067.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	206.4175918429	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	457	False	NA	-21	True	AAAAAG	-12	NA	41946688	41938736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416
transcript_93779.known	chr22	-	689	4	FSM	ENSG00000100162.15	ENST00000396437.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	46.8852025933793	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACATATACACATACTT	-6	True	NA	-16	True	AATAAA	-22	NA	41947151	41944920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41945305_41945912_41946006_41946416_41946497_41947019
transcript_93780.known	chr22	-	1856	10	FSM	ENSG00000198951.12	ENST00000403363.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_9	55.5477772332571	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-15	True	NA	-40	True	NA	NA	NA	42070830	42059795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070367_42070762
transcript_93781.known	chr22	-	3696	9	FSM	ENSG00000198951.12	ENST00000396398.8	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	13.3925119003121	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	3	True	NA	19	True	NA	NA	NA	42070812	42058333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281
transcript_93782.nnic	chr22	-	2073	8	NIC	ENSG00000198951.12	novel	1856	10	NA	NA	7	0	intron_retention	FALSE	canonical	2	5	junction_6	65.8368422383574	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-8	True	NA	-40	True	NA	NA	NA	42070823	42059795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42068438_42068575_42070281
transcript_93783.known	chr22	-	1869	10	FSM	ENSG00000198951.12	ENST00000402937.1	1869	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	53.7132303172236	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCTCAGGTCACCAATA	-27	True	NA	-46	True	NA	NA	NA	42070842	42059801	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070374_42070762
transcript_93784.known	chr22	+	540	1	FSM	ENSG00000286659.1	ENST00000662963.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAATAGATTGATTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	42070948	42071488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42070900_42071500
transcript_93785.known	chr22	+	2335	3	FSM	ENSG00000177096.9	ENST00000321753.8	2335	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	3	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCCGCTCCCTGGGTT	-15	True	NA	3	True	AGTAAA	-16	NA	42074247	42079438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42074342_42075570_42075653_42077279
transcript_93788.known	chr22	+	591	3	FSM	ENSG00000183172.9	ENST00000422252.1	591	3	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	321.5	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCGTGACTGAGTGAT	-12	True	NA	9	True	AATAAA	-15	NA	42079690	42083353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42079906_42081924_42082066_42083118
transcript_9379.known	chr1	+	1085	3	FSM	ENSG00000266472.6	ENST00000614145.5	1085	3	0	0	0	0	multi-exon	FALSE	canonical	3	2035	junction_1	903.5	14913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	-7	True	NA	8	True	AATAAA	-17	NA	150293860	150308979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150293899_150294334_150294450_150308047
transcript_93793.known	chr22	+	1562	3	FSM	ENSG00000183172.9	ENST00000331479.4	1562	3	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	38	2760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTGTTCCTCTGAGTT	-3	True	NA	4	True	AATAAA	-13	NA	42079699	42084284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42079955_42081924_42082066_42083118
transcript_9380.known	chr1	+	1462	2	FSM	ENSG00000266472.6	ENST00000581066.2	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	3842	junction_1	0	6533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	52	False	NA	8	True	AATAAA	-17	NA	150293919	150308979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150294450_150308047
transcript_93802.known	chr22	-	1183	3	FSM	ENSG00000184983.11	ENST00000617763.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	4343	junction_1	404	16716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTTTGGATGGTGGT	NA	False	NA	-2	True	AATAAA	-24	NA	42090884	42085526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42086315_42087059_42087176_42090605
transcript_93805.known	chr22	+	1521	4	FSM	ENSG00000237037.9	ENST00000417327.5	1521	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.11805216802087	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCTGTGGTTCTCTGT	-3	True	NA	NA	False	NA	NA	NA	42090955	42125349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42091182_42091296_42091601_42124046_42124563_42124874
transcript_93807.known	chr22	-	1189	1	FSM	ENSG00000213790.2	ENST00000396387.2	1189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	330	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTTACTGCTCAGAT	21	False	NA	NA	False	AAGAAA	-4	NA	42108953	42107764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42107800_42109000
transcript_93810.known	chr22	-	780	2	FSM	ENSG00000229891.3	ENST00000432473.2	896	2	116	0	40	0	multi-exon	FALSE	canonical	3	118	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTGTTCCATTTCTGT	9082	False	NA	-15	True	AATAAA	-18	NA	42369168	42364399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42364726_42368714
transcript_93811.known	chr22	-	1142	2	FSM	ENSG00000229891.3	ENST00000424852.1	1142	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCCCTGTATTAAATG	9014	False	NA	-140	True	AATAAA	-27	NA	42369236	42364524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42365145_42368714
transcript_93813.known	chr22	-	475	2	FSM	ENSG00000229891.3	ENST00000412060.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTGTTCCATTTCT	9042	False	NA	-17	True	AATAAA	-16	NA	42369208	42364401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42364726_42369057
transcript_93819.known	chr22	+	1346	11	FSM	ENSG00000172250.17	ENST00000359906.7	1385	11	37	2	11	0	multi-exon	FALSE	canonical	1	3	junction_10	11.2800709217629	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTCG	NA	False	NA	NA	False	AATAAA	-18	NA	42500589	42512560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42500693_42501624_42501775_42501918_42502033_42502350_42502393_42502748_42502769_42503198_42503274_42505032_42505143_42509027_42509111_42510630_42510725_42511815_42511928_42512117
transcript_9382.known	chr1	+	2414	16	FSM	ENSG00000117360.13	ENST00000324862.7	2414	16	0	0	0	0	multi-exon	TRUE	canonical	3	165	junction_1	49.6854103334168	3194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTCTACAGGTGATC	-19	True	NA	67	True	TTTAAA	-39	NA	150321532	150353233	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150321593_150324894_150325088_150325750_150325882_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_93832.known	chr22	-	5419	7	FSM	ENSG00000189306.11	ENST00000323013.7	5419	7	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_4	149.846310153659	1808	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGAACCTTTTTTTTT	-1	True	NA	-7	True	AATAAA	-14	NA	42519796	42508343	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42519713
transcript_93835.nnic	chr22	+	1518	13	NNC	ENSG00000183569.18	novel	1337	12	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_9	8.51306185941475	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	NA	False	NA	4	True	AATAAA	-18	NA	42553855	42574382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42563388_42563470_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_93839.nnic	chr22	+	1334	12	NNC	ENSG00000183569.18	novel	596	3	NA	NA	-3931	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.67488014319164	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	NA	False	NA	4	True	AATAAA	-18	NA	42549685	42574382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_42549770_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_9384.nic	chr1	+	1234	4	ISM	ENSG00000163125.16	ENST00000369068.5	8186	11	30	34426	30	517	5prime_fragment	FALSE	canonical	3	52	junction_3	17.6131264181639	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAACAAAAACTACACT	16	True	NA	NA	False	NA	NA	NA	150364176	150442140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_150364920_150417595_150417726_150440922_150441024_150441880
transcript_93840.known	chr22	+	1337	12	FSM	ENSG00000183569.18	ENST00000327678.10	1337	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	6.93297307815913	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	-2	True	NA	4	True	AATAAA	-18	NA	42553955	42574382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_93846.nic	chr22	+	1395	11	NIC	ENSG00000183569.18	novel	1337	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	9.0575934993794	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	NA	False	NA	4	True	AATAAA	-18	NA	42553855	42574382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_42554043_42554937_42555088_42555231_42555346_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_9385.known	chr1	+	1043	3	FSM	ENSG00000163125.16	ENST00000369067.7	1043	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	3	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGGTATTTTTAAGCC	14	True	NA	NA	False	TTTAAA	-45	NA	150364707	150441623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150364920_150417595_150417726_150440922
transcript_93854.known	chr22	-	2375	8	FSM	ENSG00000182841.13	ENST00000357802.7	2387	8	1	11	0	-11	multi-exon	FALSE	canonical	3	54	junction_1	167.040994601777	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCGGGTTGGAGGGT	-18	True	NA	NA	False	AATAAA	-13	NA	42582038	42555222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_93859.nnic	chr22	-	1065	8	NNC	ENSG00000182841.13	novel	2359	7	NA	NA	-30	1471	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	170.460480787202	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCAGTGCTTCGTT	5667	False	NA	1	True	TTTAAA	-18	NA	42582069	42571772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_42571884_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_9386.known	chr1	+	8186	11	FSM	ENSG00000163125.16	ENST00000369068.5	8186	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	16.3340135912763	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGACATTTTTCTTTGA	-14	True	NA	15	True	AATAAA	-16	NA	150364146	150476566	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150364920_150417595_150417726_150440922_150441024_150441880_150441959_150443230_150443284_150444250_150444378_150446225_150446402_150457287_150457571_150460059_150460318_150464526_150464728_150470560
transcript_93862.known	chr22	-	833	7	FSM	ENSG00000182841.13	ENST00000458605.6	2359	7	37	1489	-4	-353	multi-exon	FALSE	canonical	3	129	junction_5	167.714042345893	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGAGAGCCGCAGTGGA	19	True	NA	NA	False	NA	NA	NA	42582001	42574732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_93867.nic	chr22	-	1119	2	ISM	ENSG00000182841.13	ENST00000421116.1	729	4	-72	2284	-30	-2284	5prime_fragment	FALSE	canonical	3	139	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATCCTAAGTAGCCCAA	5667	False	NA	NA	False	AAAAAG	-1	NA	42582069	42579381	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_42580360_42581928
transcript_9387.known	chr1	+	2727	18	FSM	ENSG00000143374.18	ENST00000369064.8	2727	18	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_8	37.5484922913877	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	-5	True	NA	15	True	AATAAA	-29	NA	150487418	150507602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_93875.known	chr22	-	3337	9	FSM	ENSG00000100227.19	ENST00000445215.5	3337	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	201.940585321525	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	5030	False	NA	-5	True	AATAAA	-16	NA	42614869	42583720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595604_42596185_42596366_42599697_42599794_42601969_42602057_42602769_42603161_42614798
transcript_93878.known	chr22	-	3323	8	FSM	ENSG00000100227.19	ENST00000348657.6	3323	8	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	159.290262587209	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	0	True	NA	-5	True	AATAAA	-16	NA	42614931	42583720	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
transcript_93887.known	chr22	+	150	1	FSM	ENSG00000276027.1	ENST00000362512.1	150	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTATTCACGCCTAAAAA	-1	True	NA	NA	False	NA	NA	NA	42615243	42615393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42615200_42615400
transcript_93890.known	chr22	-	2916	9	FSM	ENSG00000100243.22	ENST00000352397.10	2916	9	0	0	0	0	multi-exon	FALSE	canonical	3	1493	junction_8	98.6585019144321	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAGAAGATAGGTGGCTG	-22	True	NA	-6	True	AATAAA	-15	NA	42649392	42617839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
transcript_93894.known	chr22	-	2092	3	FSM	ENSG00000128274.17	ENST00000642412.2	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	8.5	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGGCCTTGTGATTGGT	0	True	NA	-20	True	AATAAA	-16	NA	42720870	42692120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42693998_42695490_42695632_42720796
transcript_93895.known	chr22	-	1956	3	FSM	ENSG00000128274.17	ENST00000381278.4	1956	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.5	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	14	True	NA	-21	True	AATAAA	-15	NA	42720819	42692121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42693998_42695574_42695632_42720796
transcript_93896.known	chr22	-	407	2	FSM	ENSG00000128274.17	ENST00000647439.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTATTTGCATATCT	8	True	NA	NA	False	AATAAA	-25	NA	42720862	42718245	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42718587_42720796
transcript_93898.known	chr22	-	3251	11	FSM	ENSG00000100266.19	ENST00000263246.8	3251	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_5	38.270615359568	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-20	True	NA	-18	True	AATAAA	-17	NA	43015149	42869772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_42912020_42912158_43015020
transcript_9390.nnic	chr1	+	2595	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_7	66.9743421020319	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGCTGGTCATATGT	-24	True	NA	11	True	AATAAA	-25	NA	150487399	150507598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_93900.nnic	chr22	-	3134	10	NIC	ENSG00000100266.19	novel	3251	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	47	junction_9	137.585887878117	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	2	True	NA	-18	True	AATAAA	-17	NA	43015169	42869772	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_43015020
transcript_93903.known	chr22	-	2728	16	FSM	ENSG00000242247.11	ENST00000263245.10	2728	16	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	22.4908870434227	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-26	True	NA	3	True	AATAAA	-41	NA	42857273	42796501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42810812_42810945_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_93911.known	chr22	-	1683	12	FSM	ENSG00000100271.17	ENST00000440761.1	1683	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	27.688049753884	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACGAAGGCACTTCTT	NA	False	NA	-30	True	NA	NA	NA	43089419	43039668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43070170_43070243_43075473_43075591_43079901_43079987_43089276
transcript_93917.known	chr22	-	1736	11	FSM	ENSG00000100271.17	ENST00000266254.12	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.63379468330107	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCTTCAAGCATGTA	5	True	NA	NA	False	ATTAAA	-22	NA	43089391	43039515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079901_43079987_43089276
transcript_9392.known	chr1	+	2162	16	FSM	ENSG00000143374.18	ENST00000606933.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	56.7244411362705	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCCAGGCGCAGTGGCT	-4	True	NA	NA	False	AATAAA	-1	NA	150487419	150507284	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_93926.known	chr22	+	951	5	FSM	ENSG00000100290.3	ENST00000216115.3	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8.31790237980706	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCTCTGGGG	1	True	NA	15	True	AATAAA	-17	NA	43110749	43129712	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43110804_43124015_43124184_43127696_43127796_43128495_43128626_43129212
transcript_93930.known	chr22	+	836	4	FSM	ENSG00000100300.18	ENST00000337554.8	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	44.0933353492591	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGCCTTTTTGCTTGGG	3	True	NA	25	True	AATAAA	-18	NA	43151558	43163242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43151605_43159209_43159421_43161051_43161191_43162802
transcript_93932.known	chr22	+	1075	4	FSM	ENSG00000100300.18	ENST00000396265.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	149.675946260209	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	46	False	NA	24	True	AATAAA	-17	NA	43151934	43163241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43152221_43159209_43159421_43161051_43161191_43162802
transcript_93933.known	chr22	+	636	3	FSM	ENSG00000100300.18	ENST00000583777.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	153.5	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	-9	True	NA	24	True	AATAAA	-17	NA	43151546	43163241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43151605_43161051_43161191_43162802
transcript_93942.known	chr22	-	1129	8	FSM	ENSG00000186976.15	ENST00000356087.8	1129	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3.36852174930046	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGATGGTGATGTGAAAT	-7	True	NA	NA	False	AATACA	-15	NA	43812305	43716670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43716973_43731698_43731812_43735856_43735994_43755765_43755833_43765304_43765394_43782179_43782326_43808994_43809132_43812167
transcript_93947.nnic	chr22	+	639	2	NNC	ENSG00000261251.1	novel	859	2	NA	NA	-34	-1617	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGGTTTTTGGTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	43812421	43815777	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_43812834_43815550
transcript_93948.known	chr22	+	859	2	FSM	ENSG00000261251.1	ENST00000563715.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTATATGCAACAGATG	NA	False	NA	NA	False	NA	NA	NA	43812455	43817394	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43812834_43816913
transcript_93949.known	chr22	-	2561	8	FSM	ENSG00000130540.14	ENST00000422525.1	2561	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	6.77630927178938	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCGTCGAGCGTTTCTG	1	True	NA	-5	True	AATAAA	-14	NA	43862470	43824509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43826114_43827513_43827641_43829059_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
transcript_93950.known	chr22	+	5394	13	FSM	ENSG00000188677.15	ENST00000338758.12	5394	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	7.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTCCACCGTCTTT	10	True	NA	14	True	AATAAA	-14	NA	44024301	44172939	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44024452_44093927_44094018_44100052_44100124_44119037_44119141_44131486_44131628_44132893_44133010_44136459_44136519_44140123_44140144_44147860_44147923_44151482_44151552_44157981_44158084_44163857_44163931_44168601
transcript_93969.known	chr22	+	1692	15	FSM	ENSG00000100347.15	ENST00000350028.5	1692	15	0	0	0	0	multi-exon	TRUE	canonical	3	447	junction_8	440.442895138009	6742	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	4	True	NA	26	True	AATAAA	-17	NA	43955441	43996529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43955599_43963285_43963397_43964451_43964554_43968730_43968819_43972235_43972343_43972870_43973002_43973235_43973324_43976054_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
transcript_93977.known	chr22	+	2753	9	FSM	ENSG00000100344.11	ENST00000216180.8	2753	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	13.7289611770155	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAAGACAGCTGGG	14	True	NA	NA	False	AATAAA	-18	NA	43923804	43947582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
transcript_93983.known	chr22	+	322	1	FSM	ENSG00000224856.2	ENST00000430869.2	322	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	61	False	NA	NA	False	NA	NA	NA	43957026	43957348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43957000_43957300
transcript_93987.nnic	chr22	+	1570	12	NIC	ENSG00000241484.10	novel	1725	13	NA	NA	0	-113	combination_of_known_splicesites	FALSE	canonical	3	11	junction_10	94.789109113925	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	-15	True	NA	3	True	NA	NA	NA	44752557	44862671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859679_44859835_44862274
transcript_93988.nnic	chr22	+	1387	11	NIC	ENSG00000241484.10	novel	1725	13	NA	NA	0	-113	combination_of_known_splicesites	FALSE	canonical	2	10	junction_3	99.4909543626957	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	-15	True	NA	3	True	NA	NA	NA	44752557	44862671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_44752628_44786456_44786607_44802076_44802165_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_93990.nnic	chr22	+	1368	11	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	1	-113	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	98.7522657967907	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	-14	True	NA	3	True	NA	NA	NA	44752558	44862671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_44752628_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_94000.known	chr22	+	1725	13	FSM	ENSG00000241484.10	ENST00000389774.6	1725	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	119.482100007584	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	-15	True	NA	116	True	NA	NA	NA	44752557	44862784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44809005_44809099_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_94010.known	chr22	+	1615	12	FSM	ENSG00000241484.10	ENST00000356099.11	1615	12	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	30.5935768119512	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	2	True	NA	116	True	NA	NA	NA	44752574	44862784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_94016.known	chr22	+	1487	11	FSM	ENSG00000241484.10	ENST00000336963.8	1487	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	94.8082802291024	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGGATGGATGTTTT	30	False	NA	120	True	NA	NA	NA	44752602	44862788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44862274
transcript_94021.nic	chr22	+	1449	11	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-6	-101	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	96.1351132521307	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCATTAGATGAATTCA	NA	False	NA	15	True	NA	NA	NA	44752551	44862683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_44752628_44786456_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_94023.known	chr22	+	2905	10	FSM	ENSG00000241484.10	ENST00000460809.5	2905	10	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	27.1843273656162	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	1	True	NA	NA	False	NA	NA	NA	44752573	44850963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931
transcript_94034.nic	chr22	+	675	2	ISM	ENSG00000241484.10	ENST00000447333.5	768	8	-34	38536	-6	547	5prime_fragment	FALSE	canonical	3	260	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTAAAACTAATTGGAAA	NA	False	NA	NA	False	AAAAAG	-4	NA	44752551	44787055	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_44752628_44786456
transcript_94035.known	chr22	+	1474	10	FSM	ENSG00000241484.10	ENST00000389772.8	1474	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	100.792905884012	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	11	False	NA	116	True	NA	NA	NA	44786456	44862784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_9404.known	chr1	+	2046	10	FSM	ENSG00000143369.15	ENST00000369047.9	2046	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.3356476460191	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCATCTTGAATTTAT	1	True	NA	NA	False	ACTAAA	-14	NA	150508108	150513789	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150508280_150509530_150509582_150509660_150509763_150509921_150510003_150510101_150510183_150510875_150511199_150511456_150511832_150512351_150512573_150512724_150512813_150513236
transcript_94043.nnic	chr22	-	856	4	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	14.6590889515307	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-9	True	NA	-3	True	ACTAAA	-17	NA	45163806	45134289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45134798_45138823_45138917_45158059_45158175_45163666
transcript_94046.nnic	chr22	-	862	4	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	15.5777619273972	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-4	True	NA	-3	True	ACTAAA	-17	NA	45163801	45134289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45134798_45138823_45138917_45158059_45158186_45163666
transcript_94050.nnic	chr22	-	885	3	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	14.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-4	True	NA	-3	True	ACTAAA	-17	NA	45163801	45134289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45134798_45138823_45138917_45163517
transcript_94051.known	chr22	-	2076	3	FSM	ENSG00000226328.7	ENST00000426282.6	2076	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	18	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTGTAGGCCACATTA	16	True	NA	NA	False	AATAAA	-19	NA	45163781	45133019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_45134798_45138823_45138917_45163576
transcript_94052.nnic	chr22	-	801	3	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	9.5	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	NA	False	NA	-3	True	ACTAAA	-17	NA	45163866	45134289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45134798_45138823_45138917_45163666
transcript_94057.known	chr22	-	596	2	FSM	ENSG00000226328.7	ENST00000432502.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	138	False	NA	-3	True	ACTAAA	-17	NA	45163659	45134289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_45134798_45163571
transcript_94058.nnic	chr22	-	718	2	NNC	ENSG00000226328.7	novel	596	2	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	NA	False	NA	-3	True	ACTAAA	-17	NA	45163876	45134289	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45134798_45163666
transcript_94059.nnic	chr22	-	465	2	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-25	-23661	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTGTGCACATTTAGAG	-9	True	NA	NA	False	NA	NA	NA	45163806	45157950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45158186_45163576
transcript_94060.nnic	chr22	-	489	2	Genic_Genomic	ENSG00000226328.7	novel	2076	3	NA	NA	-40	-23711	multi-exon	FALSE	canonical	1	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCACCATTTTGTGTAC	-24	True	NA	NA	False	AAGAAA	-1	NA	45163821	45158000	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr22_-_45158186_45163517
transcript_94062.known	chr22	+	5151	8	FSM	ENSG00000093000.19	ENST00000347635.9	5151	8	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_2	64.4309470578814	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTCTTATGTTCCT	-7	True	NA	NA	False	AATAAA	-23	NA	45163924	45188017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
transcript_94065.known	chr22	+	627	4	FSM	ENSG00000100373.10	ENST00000396082.2	627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCCTCCAACTGCAGGA	39	False	NA	NA	False	NA	NA	NA	45284990	45295822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45285066_45285940_45286097_45293180_45293314_45295559
transcript_94066.known	chr22	+	1084	6	FSM	ENSG00000100373.10	ENST00000216211.9	1084	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.60768096208106	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGTAACTACTTACAGA	-3	True	NA	NA	False	AATAAA	-19	NA	45284948	45295874	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45285066_45285940_45286097_45287171_45287452_45289060_45289144_45293180_45293314_45295559
transcript_94070.known	chr22	+	2883	9	FSM	ENSG00000100376.12	ENST00000441876.7	2883	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	12.4342018240014	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	-19	True	NA	13	True	AATAAA	-14	NA	45309933	45341955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_94077.nnic	chr22	+	1777	5	NNC	ENSG00000100376.12	novel	1612	5	NA	NA	21	-4	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	56.817140899556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTTGTCCATTTGATA	2	True	NA	4	True	AAGAAA	-11	NA	45309954	45329408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328004_45328331
transcript_94081.known	chr22	+	1612	5	FSM	ENSG00000100376.12	ENST00000405673.5	1612	5	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_4	52.5184491393263	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCCATTTGATAGCTG	0	True	NA	8	True	AATACA	-1	NA	45310123	45329412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45328391
transcript_94082.known	chr22	+	1490	7	FSM	ENSG00000128408.9	ENST00000614167.2	1490	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	5.15320827791344	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTATTTCTGTGAGG	-21	True	NA	104	True	AAAACA	-14	NA	45413692	45432509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289_45422409_45425947_45426176_45430899_45431067_45432283
transcript_94085.nic	chr22	+	1466	4	ISM	ENSG00000128408.9	ENST00000614167.2	1490	7	-32	9536	-32	467	5prime_fragment	FALSE	canonical	3	11	junction_3	3.85861230093008	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTTTGTTTGTTT	NA	False	NA	17	True	NA	NA	NA	45413660	45422973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289
transcript_94086.nic	chr22	+	2080	4	ISM	ENSG00000128408.9	ENST00000614167.2	1490	7	-32	8922	-32	1081	5prime_fragment	FALSE	canonical	3	11	junction_3	3.85861230093008	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAAAACTGTCCTGGTGG	NA	False	NA	NA	False	AATATA	-13	NA	45413660	45423587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289
transcript_94089.known	chr22	+	481	3	FSM	ENSG00000077942.19	ENST00000465578.1	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	517.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTGTGTTCCAATA	44	False	NA	-22	True	NA	NA	NA	45533150	45535584	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45533165_45533760_45533899_45535255
transcript_9409.known	chr1	+	566	2	FSM	ENSG00000228126.1	ENST00000416894.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGATATCACAAATTCAG	4	True	NA	NA	False	NA	NA	NA	150515756	150518032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150516063_150517772
transcript_94090.nnic	chr22	-	629	4	NNC	ENSG00000238120.1	novel	548	2	NA	NA	-15237	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTGTCATGACAGTAC	5605	False	NA	NA	False	AATAAA	-38	NA	45620858	45604431	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45604759_45605400_45605514_45620208_45620299_45620759
transcript_94097.known	chr22	+	3294	12	FSM	ENSG00000130638.17	ENST00000252934.10	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_4	72.1914351276183	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGTAATGGTTATGT	-25	True	NA	NA	False	AATAAA	-26	NA	45671833	45845307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_94104.known	chr22	+	3135	11	FSM	ENSG00000130638.17	ENST00000381061.8	3135	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	298.399664879168	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATGGGGTAATGGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	45671797	45845304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45672180_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_9411.known	chr1	+	1826	3	FSM	ENSG00000143382.16	ENST00000483335.1	1826	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTGTGTGCCTGAG	8	True	NA	NA	False	NA	NA	NA	150549420	150551906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150549500_150549821_150550277_150550614
transcript_94112.known	chr22	+	1207	2	FSM	ENSG00000273145.1	ENST00000608290.1	1207	2	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTTTTGTCTTTTTGT	2635	False	NA	17	True	CATAAA	-19	NA	46013605	46015498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46013811_46014496
transcript_94113.known	chr22	-	493	4	FSM	ENSG00000231711.2	ENST00000444890.1	493	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCAGGTCTCCTCCTGGGC	9401	False	NA	NA	False	NA	NA	NA	46044853	46041008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46041053_46042573_46042641_46043562_46043700_46044608
transcript_94115.known	chr22	+	875	5	FSM	ENSG00000197182.15	ENST00000381051.6	875	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.58113883008419	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGCCTAATGATTAAACA	24	True	NA	NA	False	NA	NA	NA	46053868	46106023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46053921_46097925_46098011_46098493_46098559_46103191_46103250_46105408
transcript_94116.nnic	chr22	+	334	3	NNC	ENSG00000241990.5	novel	464	3	NA	NA	-8783	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGATTATGTTCTGTA	278	False	NA	NA	False	AATAAA	-23	NA	46044921	46057210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_46045008_46056846_46056946_46057061
transcript_94117.known	chr22	+	464	3	FSM	ENSG00000241990.5	ENST00000416202.5	464	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGATTATGTTCTGTA	155	False	NA	NA	False	AATAAA	-23	NA	46053704	46057210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46053921_46056846_46056946_46057061
transcript_9412.known	chr1	-	3950	3	FSM	ENSG00000143384.14	ENST00000369026.3	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	21.5	3680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGTGTGATATGGGTC	-7	True	NA	31	True	AATAAA	-14	NA	150579610	150574557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150577492_150578243_150578492_150578842
transcript_94122.known	chr22	-	1600	5	FSM	ENSG00000205643.11	ENST00000381037.4	1600	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	43.4935340021939	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCACTGATGGACTTT	-12	True	NA	-20	True	AATAAA	-14	NA	46250289	46244020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46246672_46246796_46247109_46247222_46248171_46248285_46250255
transcript_94126.known	chr22	-	1489	4	FSM	ENSG00000205643.11	ENST00000314567.8	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	19.4821855949366	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	-16	True	NA	-12	True	AATAAA	-22	NA	46250293	46244012	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46247109_46247222_46248171_46248285_46250255
transcript_94128.known	chr22	-	498	3	FSM	ENSG00000205643.11	ENST00000474256.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	48	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGAGGGTAGTCCAAAGG	NA	False	NA	NA	False	NA	NA	NA	46250311	46244908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46247109_46247222_46250255
transcript_94131.nnic	chr22	-	1404	3	NIC	ENSG00000205643.11	novel	1600	5	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	41	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCACTGATGGACTTT	NA	False	NA	-20	True	AATAAA	-14	NA	46250328	46244020	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_46245239_46248171_46248285_46250255
transcript_94132.known	chr22	-	655	2	FSM	ENSG00000205643.11	ENST00000475605.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGGATAGAATTTTTA	-17	True	NA	-103	True	NA	NA	NA	46250294	46244622	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46250255
transcript_94133.known	chr22	-	1439	3	FSM	ENSG00000205643.11	ENST00000404583.5	1439	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	42	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGACTTTAAGATGCTCA	1992	False	NA	-10	True	AATAAA	-24	NA	46248285	46244010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46247124_46247222_46248171
transcript_94138.known	chr22	+	2566	14	FSM	ENSG00000075234.17	ENST00000381031.8	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_7	16.8687940593793	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	-12	True	NA	18	True	ATTAAA	-23	NA	46268007	46294008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46268073_46268513_46268592_46272334_46272417_46273897_46274070_46275247_46275422_46278585_46278662_46281598_46281719_46283972_46284033_46285240_46285280_46287072_46287155_46288422_46288589_46289401_46289562_46289825_46289900_46292790
transcript_94141.known	chr22	-	1518	1	FSM	ENSG00000277232.2	ENST00000623117.1	1518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCGTCAGGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	46296660	46295142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46295100_46296700
transcript_94144.nic	chr22	+	617	4	ISM	ENSG00000075218.19	ENST00000454366.2	2983	12	-79	22174	-79	-18680	5prime_fragment	FALSE	canonical	0	0	junction_2	82.4957911384305	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGAAGAAAAGCCCCA	6	True	NA	NA	False	AATAAA	-19	NA	46296790	46308636	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318
transcript_94147.known	chr22	+	2983	12	FSM	ENSG00000075218.19	ENST00000454366.2	2983	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	66.7319790265012	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	-31	True	NA	22	True	AATAAA	-19	NA	46296869	46330810	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_94149.known	chr22	+	1651	11	FSM	ENSG00000100416.15	ENST00000645190.1	1651	11	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	95.9126686105647	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	-17	True	NA	21	True	AATAAA	-17	NA	46335713	46357340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_94151.known	chr22	+	1882	11	FSM	ENSG00000100416.15	ENST00000457572.5	1882	11	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	111.882259541001	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_94156.known	chr22	+	1258	11	FSM	ENSG00000100416.15	ENST00000644006.1	1258	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	144.648850669475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAGGCCTGAGTCCCTT	167	False	NA	NA	False	NA	NA	NA	46335950	46356979	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46336107_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_94159.known	chr22	+	1381	10	FSM	ENSG00000100416.15	ENST00000381019.3	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	140.699838110939	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCTCTGGCTGCTGG	14	True	NA	NA	False	NA	NA	NA	46335744	46357184	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_9416.known	chr1	-	1110	2	FSM	ENSG00000143384.14	ENST00000307940.3	1110	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTTGAGAACAGGAAAG	315	False	NA	NA	False	NA	NA	NA	150579530	150577069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150577492_150578842
transcript_94164.known	chr22	+	1830	10	FSM	ENSG00000100416.15	ENST00000381021.7	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_3	98.9314515144978	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_94166.known	chr22	+	1775	10	FSM	ENSG00000100416.15	ENST00000453630.5	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	116.711208428495	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_94167.known	chr22	+	1793	10	FSM	ENSG00000100416.15	ENST00000441818.5	1793	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	115.519866283565	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	23	False	NA	16	True	AATAAA	-12	NA	46335400	46357335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_94174.known	chr22	+	1688	9	FSM	ENSG00000100416.15	ENST00000456595.5	1688	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	159.970309745277	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	47	False	NA	18	True	AATAAA	-14	NA	46335424	46357337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_94184.known	chr22	+	1476	2	FSM	ENSG00000100416.15	ENST00000476901.1	1476	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	NA	False	NA	10	True	AATAAA	-16	NA	46330874	46333699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46331733_46333081
transcript_94185.known	chr22	+	576	4	FSM	ENSG00000100416.15	ENST00000496831.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	85.4179268199728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTGCTGAGAATAGACTTC	111	False	NA	NA	False	AAGAAA	-3	NA	46335894	46350420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46336107_46337778_46337945_46346421_46346545_46350345
transcript_94186.known	chr22	-	670	1	FSM	ENSG00000260708.1	ENST00000564152.1	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	863	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTAAAATTATTTTT	NA	False	NA	-24	True	AATAAA	-32	NA	46762563	46761893	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46761900_46762600
transcript_94188.known	chr22	+	3758	13	FSM	ENSG00000054611.14	ENST00000337137.9	3758	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	17.5045628972055	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGGCCTTGGCCTGTGA	2	True	NA	14	True	AATAAA	-14	NA	46762649	47175693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_94191.known	chr22	+	1949	12	FSM	ENSG00000054611.14	ENST00000407381.7	1949	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	44.6375671009769	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	24	True	NA	26	True	AATAAA	-13	NA	46762671	47174083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_94196.nnic	chr22	+	1607	10	NIC	ENSG00000054611.14	novel	1886	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46.048283838211	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGAGACGTTGCGCTGAC	NA	False	NA	30	True	AATAAA	-17	NA	46762619	47174087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_46762849_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_942.known	chr1	-	708	3	FSM	ENSG00000078369.18	ENST00000472614.2	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	1627	junction_2	211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGATGTATTTTTTCCT	789	False	NA	NA	False	AATAAA	-17	NA	1890966	1824987	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1825500_1839189_1839239_1890819
transcript_94202.nic	chr22	+	926	6	ISM	ENSG00000054611.14	ENST00000337137.9	3758	13	-23	284370	10	97548	5prime_fragment	TRUE	canonical	3	105	junction_1	22.8245481882994	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTGCATTTATTGAG	-21	True	NA	NA	False	AAAAAG	-1	NA	46762626	46891323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265
transcript_94207.known	chr22	-	1594	4	FSM	ENSG00000260613.2	ENST00000666898.1	1594	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTGCTCTGAACATTC	NA	False	NA	NA	False	AATAAA	-20	NA	49838901	49832448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_49833688_49837291_49837392_49837507_49837553_49838691
transcript_94209.known	chr22	+	1428	10	FSM	ENSG00000184164.15	ENST00000328268.9	1428	10	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_5	70.4919223110784	853	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGGGCGTGGGTTTGTCT	-11	True	NA	31	True	AATAAA	-28	NA	49918633	49927537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_94211.known	chr22	-	5330	10	FSM	ENSG00000182858.14	ENST00000330817.11	5330	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	13.3259238671688	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTCTTTCCTAGACGG	0	True	NA	NA	False	GATAAA	-14	NA	49918438	49900228	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_49904067_49904178_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_94212.nic	chr22	+	1468	2	ISM	ENSG00000198355.5	ENST00000360612.5	2102	6	1759	0	1759	0	3prime_fragment	FALSE	canonical	3	301	junction_1	0	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATCCTGTATTTAT	983	False	NA	20	True	ATTAAA	-16	NA	49962530	49964072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_49962866_49962939
transcript_94213.nic	chr22	+	307	2	ISM	ENSG00000073150.14	ENST00000402472.2	2291	5	-30	4086	0	-4086	5prime_fragment	FALSE	canonical	3	10	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGTGGATTCCTTTGCCT	-15	True	NA	14	True	AATAAA	-22	NA	50170730	50175512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_50170957_50175431
transcript_94214.known	chr22	+	3052	3	FSM	ENSG00000073150.14	ENST00000395842.3	3052	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTCCGCCGGGGACT	-15	True	NA	27	True	AATAAA	-18	NA	50170730	50180295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50170957_50176938_50178403_50178933
transcript_94215.nic	chr22	+	1689	11	NIC	ENSG00000170638.10	novel	1628	10	NA	NA	-10	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_10	125.604299289475	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAATAAATTCTAATTT	-15	True	NA	-10	True	NA	NA	NA	50185902	50199569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344_50198516_50199115
transcript_94216.known	chr22	+	2305	10	FSM	ENSG00000170638.10	ENST00000380909.9	2305	10	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	64.9229362730999	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	-5	True	NA	16	True	AATAAA	-16	NA	50185912	50199595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_94218.known	chr22	+	2329	10	FSM	ENSG00000170638.10	ENST00000303434.8	2329	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	96.8627640619882	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTGACGTGTGAAC	-1	True	NA	19	True	AATAAA	-19	NA	50185916	50199598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_94219.known	chr22	+	2172	10	FSM	ENSG00000170638.10	ENST00000395827.5	2172	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	123.251724751912	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGCCGACTCGGT	15	False	NA	NA	False	NA	NA	NA	50190597	50199475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50190649_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_94221.known	chr22	+	1628	10	FSM	ENSG00000170638.10	ENST00000395829.1	1628	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	124.474897067642	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAATAAATTCTAATTT	371	False	NA	-10	True	NA	NA	NA	50193013	50199569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344_50198516_50199115
transcript_94222.known	chr22	-	4044	16	FSM	ENSG00000128159.12	ENST00000491449.5	4044	16	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	61.5550340932585	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTGCAGCTCTCTCT	807	False	NA	-7	True	AATAAA	-13	NA	50226189	50217693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50217828_50217917_50218118_50218188_50218403_50218487_50218621_50218702_50218898_50219067_50219210_50219287_50219457_50219643_50219792_50219956_50221875_50222027_50222103_50222453_50222593_50224140_50224257_50224331_50224421_50224510_50224593_50225793_50225944_50226049
transcript_94224.nnic	chr22	-	898	3	NNC	ENSG00000196576.16	novel	609	3	NA	NA	1130	284	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_2	33.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTACCTGGAGATGGAC	-1	True	NA	NA	False	NA	NA	NA	50300332	50289815	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_50290598_50294718_50294779_50300276
transcript_94226.known	chr22	+	4276	2	FSM	ENSG00000128165.9	ENST00000395738.2	4276	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCAGAATCATCTTTTC	17	True	NA	NA	False	AATAAA	-23	NA	50481555	50486440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50481958_50482566
transcript_94228.known	chr22	-	2593	14	FSM	ENSG00000100258.18	ENST00000474879.7	2593	14	0	0	0	0	multi-exon	FALSE	canonical	1	89	junction_12	63.929509997502	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-4	True	NA	-23	True	AATAAA	-20	NA	50507702	50502948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
transcript_94239.known	chr22	-	2658	14	FSM	ENSG00000100258.18	ENST00000216080.5	2658	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	92.3542831138191	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCCTGGTGCTGCT	14	False	NA	-25	True	AATAAA	-18	NA	50507684	50502950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507121_50507581
transcript_94242.known	chr22	+	1996	20	FSM	ENSG00000025770.19	ENST00000299821.15	1996	20	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_15	57.8271854710342	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	20	True	NA	24	True	AATAAA	-18	NA	50508259	50523472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522497_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
transcript_9425.known	chr1	-	703	2	FSM	ENSG00000143420.19	ENST00000362052.7	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	1345	junction_1	0	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAATCAGTTTCTTCA	17	True	NA	-27	True	AATAAA	-11	NA	150629577	150627053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150627593_150629413
transcript_94257.known	chr22	+	1388	9	FSM	ENSG00000025770.19	ENST00000395698.7	1388	9	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	16.7032930884901	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATACAGAGGAAATGTTA	3	True	NA	10	True	ATTAAA	-16	NA	50508242	50519752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189
transcript_94258.known	chr22	-	643	5	FSM	ENSG00000177989.14	ENST00000403326.5	643	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.93700393700591	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTCCGCCTCTCTCTCT	9719	False	NA	-7	True	NA	NA	NA	50532108	50530425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50530561_50530711_50530853_50530936_50531059_50531190_50531296_50531968
transcript_94259.known	chr22	-	984	2	FSM	ENSG00000284194.3	ENST00000395693.8	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-12	True	NA	-5	True	ATTAAA	-15	NA	50525598	50523567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50524425_50525471
transcript_9426.known	chr1	-	2818	3	FSM	ENSG00000143420.19	ENST00000271690.12	2818	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_1	24	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	17	True	NA	-3	True	ATTAAA	-28	NA	150629577	150623280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150625809_150627466_150627593_150629413
transcript_94260.known	chr22	+	2077	19	FSM	ENSG00000025770.19	ENST00000395701.7	2077	19	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	18.9743979556079	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	4	True	NA	24	True	AATAAA	-18	NA	50508243	50523472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522500_50522570_50522670_50522721_50522820_50522923_50523016
transcript_94261.known	chr22	-	462	3	FSM	ENSG00000217442.4	ENST00000406915.4	462	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGGACCTCTTCTCTC	2	True	NA	-3	True	AATAAA	-17	NA	50562919	50551111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50551403_50556296_50556406_50562857
transcript_94262.known	chr22	-	1474	11	FSM	ENSG00000100288.20	ENST00000406938.3	1474	11	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_10	85.1920770964061	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-25	True	NA	-12	True	AATAAA	-18	NA	50582849	50578962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_94264.nic	chr22	-	1252	10	ISM	ENSG00000100288.20	ENST00000406938.3	1474	11	422	0	-7	0	3prime_fragment	FALSE	canonical	3	185	junction_9	72.6816158595185	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	559	False	NA	-12	True	AATAAA	-18	NA	50582427	50578962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248
transcript_94265.known	chr22	-	1856	10	FSM	ENSG00000100288.20	ENST00000481673.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_9	77.7059986244448	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-21	True	NA	-12	True	AATAAA	-18	NA	50582845	50578962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50582358_50582557
transcript_9427.known	chr1	-	792	4	FSM	ENSG00000143420.19	ENST00000361532.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_3	440.182537893845	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGGGGTTCTAGTT	-7	True	NA	NA	False	NA	NA	NA	150629140	150622440	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629060
transcript_94275.known	chr22	-	428	2	FSM	ENSG00000100288.20	ENST00000465842.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCACTCCTGCCCCAGC	566	False	NA	NA	False	NA	NA	NA	50582420	50581606	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50581863_50582248
transcript_94276.known	chr22	-	624	5	FSM	ENSG00000100288.20	ENST00000464225.5	624	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	149.79715451236	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	2733	False	NA	-12	True	AATAAA	-18	NA	50580253	50578962	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579803_50579973_50580083_50580189
transcript_94277.known	chr22	-	1895	9	FSM	ENSG00000100299.18	ENST00000356098.9	1895	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_8	14.9410299176462	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCCAATCCTGGGGTAA	-35	True	NA	-18	True	NA	NA	NA	50628170	50625017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627945
transcript_94278.known	chr22	-	1824	9	FSM	ENSG00000100299.18	ENST00000395619.3	1824	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	15.6983279364396	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAGATGTGACAATTCGT	-24	True	NA	-33	True	NA	NA	NA	50628159	50625032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627990
transcript_9428.known	chr1	-	725	5	FSM	ENSG00000143420.19	ENST00000361631.9	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	374.696543885849	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAATTAGGGCTTGGA	5	True	NA	NA	False	NA	NA	NA	150629128	150622543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629060
transcript_94280.known	chr22	-	4294	8	FSM	ENSG00000100299.18	ENST00000216124.10	4294	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	14.5377762665241	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTAGTGAGGGTTCTGTT	-17	True	NA	-1	True	AATAAA	-19	NA	50628152	50622753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555
transcript_94281.known	chr22	-	1650	8	FSM	ENSG00000100299.18	ENST00000453344.6	1650	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	7.4230748895809	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTGACAATTCGTCCAA	-38	True	NA	-29	True	NA	NA	NA	50628173	50625028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627945
transcript_94287.known	chr22	-	2401	10	FSM	ENSG00000079974.19	ENST00000395595.8	2401	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	62.8507933300943	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-9	True	NA	-32	True	AGTAAA	-17	NA	50783636	50767505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783500
transcript_9429.known	chr1	-	973	6	FSM	ENSG00000143457.11	ENST00000427665.1	973	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	101.316533695148	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGCAATGAATCGAGCC	3	True	NA	NA	False	NA	NA	NA	150697144	150648436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694107_150694174_150694655_150694851_150696991
transcript_94292.known	chr22	-	2169	9	FSM	ENSG00000079974.19	ENST00000395598.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	58.4335894413479	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-6	True	NA	-32	True	AGTAAA	-17	NA	50783659	50767505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
transcript_94303.known	chr22	-	2140	9	FSM	ENSG00000079974.19	ENST00000354869.8	2153	9	15	-2	9	2	multi-exon	FALSE	canonical	3	55	junction_8	51.8325127212641	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAAATGTATGTGCTT	6	True	NA	-30	True	AGTAAA	-19	NA	50783621	50767503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
transcript_94326.known	chr22	+	1112	4	FSM	ENSG00000184319.17	ENST00000496652.5	1112	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.6015872373189	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	50756947	50789186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50757327_50783119_50783295_50785172_50785294_50788749
transcript_94333.nic	chr22	+	584	4	FSM	ENSG00000184319.17	ENST00000693416.1	731	4	-35	182	-11	-7	multi-exon	FALSE	canonical	2	15	junction_3	63.4192399828317	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	NA	False	NA	NA	False	ATTAAA	-14	NA	50783728	50789172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783865_50785172_50785294_50788749_50788799_50788894
transcript_9435.known	chr1	-	3124	5	FSM	ENSG00000143457.11	ENST00000271732.8	3124	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	14.1155942134931	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCTCTGTGCACAA	-7	True	NA	-18	True	AATAAA	-17	NA	150697154	150646229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694655_150694851_150696991
transcript_94356.nic	chr22	+	694	3	FSM	ENSG00000184319.17	ENST00000689105.1	836	3	-26	168	-11	0	multi-exon	FALSE	canonical	3	45	junction_2	58.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	50783728	50789186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783865_50785172_50785294_50788749
transcript_94357.nnic	chr22	+	552	3	FSM	ENSG00000184319.17	ENST00000686648.1	521	3	-35	4	-11	0	multi-exon	FALSE	canonical	3	13	junction_2	74.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	NA	False	NA	NA	False	ATTAAA	-28	NA	50783728	50789186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783865_50785172_50785294_50788891
transcript_94358.known	chr22	+	1009	3	FSM	ENSG00000184319.17	ENST00000462238.6	1131	3	17	105	2	0	multi-exon	FALSE	canonical	3	162	junction_1	27	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	NA	False	NA	NA	False	AAGAAA	-20	NA	50783756	50799434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783865_50785172_50785294_50798654
transcript_94366.known	chr22	+	469	1	FSM	ENSG00000184319.17	ENST00000427528.1	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGGCTAAC	NA	False	NA	5	True	NA	NA	NA	50798654	50799123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50798700_50799100
transcript_94367.known	chr22	-	2341	10	FSM	ENSG00000079974.19	ENST00000395593.7	2341	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	86.9878663313964	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	11	True	NA	-32	True	AGTAAA	-17	NA	50783642	50767505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769424_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782890_50783046_50783500
transcript_94368.known	chr22	+	658	4	FSM	ENSG00000184319.17	ENST00000423888.6	732	4	2	72	2	-7	multi-exon	FALSE	canonical	2	15	junction_3	26.5622957508487	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	4	True	NA	NA	False	ATTAAA	-14	NA	50783811	50789172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50784022_50785172_50785294_50788749_50788799_50788894
transcript_94369.known	chr22	+	1080	3	FSM	ENSG00000184319.17	ENST00000651346.2	1284	3	105	99	-25	7	multi-exon	FALSE	canonical	3	80	junction_1	68	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGGTGAATATTTATT	42	False	NA	NA	False	AAGAAA	-27	NA	50783849	50799441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50784022_50785172_50785294_50798654
transcript_94370.known	chr22	+	2987	3	FSM	ENSG00000184319.17	ENST00000480246.2	3083	3	96	0	-13	0	multi-exon	FALSE	canonical	3	16	junction_1	100	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCAGACTCAGGTATTT	54	False	NA	NA	False	ATTAAA	-20	NA	50783861	50801309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50784073_50785172_50785294_50798654
transcript_94371.known	chr3	+	543	5	FSM	ENSG00000134121.10	ENST00000421198.5	543	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.78535710713571	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCACATATCTCACTTTC	-15	True	NA	NA	False	NA	NA	NA	197289	328259	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197369_244612_244693_319682_319868_325958_326065_328166
transcript_94374.known	chr3	-	726	5	FSM	ENSG00000224318.6	ENST00000452919.1	726	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.77263412660235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGACTTTTAAATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	197341	195757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195915_195995_196041_196455_196509_196606_196703_196966
transcript_94375.known	chr3	-	508	4	FSM	ENSG00000224318.6	ENST00000451839.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGGACTTTTAAATTTT	NA	False	NA	NA	False	AATAAA	-17	NA	196859	195757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195915_195995_196041_196455_196509_196606
transcript_94378.nnic	chr3	-	559	4	Antisense	novelGene_ENSG00000134115.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATGTTGAGCTAGTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	1235914	1182241	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_1182357_1183005_1183102_1194304_1194425_1235686
transcript_94387.known	chr3	-	2203	11	FSM	ENSG00000113851.16	ENST00000432408.6	2203	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	103.93387320792	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	NA	False	NA	NA	False	AGTAAA	-20	NA	3179710	3150010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175267_3179620
transcript_94392.known	chr3	-	2038	10	FSM	ENSG00000113851.16	ENST00000424814.5	2038	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	120.336359867551	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	21	False	NA	NA	False	AGTAAA	-20	NA	3179674	3150010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3151046_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_94406.known	chr3	-	2223	12	FSM	ENSG00000113851.16	ENST00000639284.1	2223	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	110.298767816409	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTCATAACCATTAAAGT	NA	False	NA	NA	False	NA	NA	NA	3179727	3144627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3145500_3150882_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_94409.known	chr3	+	2180	8	FSM	ENSG00000072756.17	ENST00000280591.10	2180	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	123.774811983831	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	-1	True	NA	6	True	AATAAA	-15	NA	3126951	3149023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146564_3147449_3147704_3147905
transcript_94410.known	chr3	+	2252	8	FSM	ENSG00000072756.17	ENST00000251607.11	2252	8	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	40.4646482142381	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	-13	True	NA	6	True	AATAAA	-15	NA	3126939	3149023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_94421.known	chr3	+	1113	7	FSM	ENSG00000072756.17	ENST00000651093.1	1113	7	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_5	130.212219941994	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTTACCAAATGGAAAAA	10	True	NA	NA	False	AAGAAA	-43	NA	3126962	3148101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3147449_3147704_3147905
transcript_94422.known	chr3	+	1934	7	FSM	ENSG00000072756.17	ENST00000650755.1	1934	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	137.088069826987	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTTAAAGTGTTATTT	-1	True	NA	-44	True	NA	NA	NA	3126951	3148911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_94429.nic	chr3	+	1540	5	ISM	ENSG00000072756.17	ENST00000651093.1	1113	7	-71	2585	-41	-2585	5prime_fragment	FALSE	canonical	3	275	junction_1	40.751533713469	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAAGATCTTGGAT	NA	False	NA	NA	False	NA	NA	NA	3126891	3145516	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583
transcript_94430.known	chr3	+	541	5	FSM	ENSG00000072756.17	ENST00000397779.3	541	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	167.285683786748	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTGACTGGCAGAAAGA	17	True	NA	NA	False	NA	NA	NA	3126969	3140587	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3127945_3128019_3129013_3129189_3137259_3137454_3140509
transcript_94432.known	chr3	-	878	5	FSM	ENSG00000113851.16	ENST00000450014.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	63.4113554499508	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGTATCCTTGTTATT	21	False	NA	-8	True	AATAAA	-13	NA	3179674	3167429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_94434.known	chr3	-	1012	5	FSM	ENSG00000113851.16	ENST00000498700.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	141.088624630053	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTGTGACATTTAGA	-6	True	NA	-19	True	AATAAA	-25	NA	3179701	3172175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3172647_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_94435.nic	chr3	+	687	4	ISM	ENSG00000072756.17	ENST00000651093.1	1113	7	-71	7373	-41	0	5prime_fragment	FALSE	canonical	3	275	junction_1	39.9694327649962	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAACTTGAGAAGTTGCA	NA	False	NA	NA	False	AGTAAA	-21	NA	3126891	3140728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509
transcript_9444.nnic	chr1	+	855	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	12.2836838484589	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACATCCTCTTTATATC	NA	False	NA	NA	False	AATAAA	-23	NA	150641669	150646836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150646257
transcript_94440.known	chr3	+	987	3	FSM	ENSG00000072756.17	ENST00000339437.11	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	118	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	-13	True	NA	NA	False	AATAAA	-13	NA	3126939	3130679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3129918
transcript_94443.known	chr3	+	1935	3	FSM	ENSG00000072756.17	ENST00000402675.5	1935	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3	True	NA	NA	False	AATAAA	-13	NA	3127019	3130679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3128019_3129013_3129189_3129918
transcript_94446.known	chr3	+	494	1	FSM	ENSG00000271870.1	ENST00000607052.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTGTTATTTCTGT	NA	False	NA	15	True	AATAAA	-21	NA	3152941	3153435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3152900_3153400
transcript_94447.known	chr3	+	2147	7	FSM	ENSG00000072756.17	ENST00000650839.1	2147	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	138.574488593279	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATATTCTCTAAAGA	1948	False	NA	0	True	ATTAAA	-14	NA	3129013	3148955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146415_3146624_3147449_3147704_3147905
transcript_94448.known	chr3	-	2147	9	FSM	ENSG00000144455.14	ENST00000272902.10	2147	9	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_6	20.1117969112658	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCGTCATCAGCTTCT	-10	True	NA	-13	True	AATAAA	-19	NA	4467269	4361145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
transcript_94449.known	chr3	-	1447	8	FSM	ENSG00000144455.14	ENST00000383843.9	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	67.7546594526976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGGACAGCATGACCTC	-5	True	NA	NA	False	AATGAA	-1	NA	4467264	4361765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4452875_4453050_4466975
transcript_94451.known	chr3	+	1657	4	FSM	ENSG00000170364.13	ENST00000425863.5	1657	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.0410262117139	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	3	True	NA	14	True	AATAAA	-16	NA	4303370	4317265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4312897_4313230_4313646_4313762_4316211
transcript_94452.known	chr3	+	1676	4	FSM	ENSG00000170364.13	ENST00000413809.5	1676	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24.4449494897321	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	-6	True	NA	14	True	AATAAA	-16	NA	4303331	4317265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4312897_4313230_4313666_4313762_4316211
transcript_94456.nnic	chr3	+	1373	3	NIC	ENSG00000170364.13	novel	1676	4	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	25.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	NA	False	NA	14	True	AATAAA	-16	NA	4303302	4317265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_4303527_4313666_4313762_4316211
transcript_94457.known	chr3	+	2443	3	FSM	ENSG00000170364.13	ENST00000358065.5	2076	3	-65	-302	-28	302	multi-exon	FALSE	canonical	3	49	junction_1	3.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGCCCAAGAATAATAAC	NA	False	NA	NA	False	AATAAA	-45	NA	4303303	4317567	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4312897_4313762_4316211
transcript_94458.known	chr3	+	1359	3	FSM	ENSG00000170364.13	ENST00000425046.1	1359	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	23.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	-1	True	NA	14	True	AATAAA	-16	NA	4303336	4317265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4313646_4313762_4316211
transcript_94459.nnic	chr3	+	2200	3	NIC	ENSG00000170364.13	novel	701	3	NA	NA	-21	0	intron_retention	FALSE	canonical	2	7	junction_1	24.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	195	False	NA	14	True	AATAAA	-16	NA	4303586	4317265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_4303869_4312897_4313762_4316211
transcript_94460.nnic	chr3	+	1226	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-29	-52	combination_of_known_splicesites	FALSE	canonical	3	37	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGGTTC	NA	False	NA	7	True	AATAAA	-26	NA	4303302	4317213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_4303527_4316211
transcript_94461.nnic	chr3	+	1278	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	3	37	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	NA	False	NA	14	True	AATAAA	-16	NA	4303302	4317265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_4303527_4316211
transcript_94462.known	chr3	+	1671	2	FSM	ENSG00000170364.13	ENST00000430981.1	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTCCTACTTAATT	-7	True	NA	25	True	AATAAA	-25	NA	4303360	4314402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4312897
transcript_94463.nnic	chr3	+	1778	2	NIC	ENSG00000170364.13	novel	668	2	NA	NA	-21	-9	intron_retention	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTGACTCCTGCGTCC	195	False	NA	16	True	AATAAA	-16	NA	4303586	4314393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_4303869_4312897
transcript_94464.known	chr3	+	457	2	FSM	ENSG00000170364.13	ENST00000490691.1	457	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGCCATCAGAAGTTGACAA	-10	True	NA	NA	False	NA	NA	NA	4303612	4316412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303869_4316211
transcript_94465.known	chr3	-	858	2	FSM	ENSG00000231249.2	ENST00000412804.2	1470	2	38	574	16	-574	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGTTAAAAAAAAAAAAAAA	10	True	NA	NA	False	NA	NA	NA	4493163	4490890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_4491369_4492783
transcript_94466.nnic	chr3	-	382	4	NNC	ENSG00000235978.7	novel	390	4	NA	NA	-203	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGAATTTTCTTATTTT	166	False	NA	NA	False	AATAAA	-16	NA	4868588	4814296	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_4814432_4825745_4825863_4830946_4831019_4868530
transcript_94468.known	chr3	-	2692	3	FSM	ENSG00000235831.7	ENST00000441386.3	2692	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCAATAAAGCTTTGC	6775	False	NA	NA	False	NA	NA	NA	4980230	4896836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_4898936_4900540_4900698_4979794
transcript_94471.known	chr3	+	2933	7	FSM	ENSG00000134108.14	ENST00000256496.8	2933	7	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_4	19.9833263830958	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGATATTGTGATTT	-24	True	NA	14	True	AATAAA	-16	NA	5122291	5180911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_5122589_5170502_5170584_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_94473.known	chr3	+	1641	7	FSM	ENSG00000134108.14	ENST00000455168.5	1641	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	87.86115941264	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTGACTTTTTATATC	-24	True	NA	19	True	ATTAAA	-25	NA	5122291	5179646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_5122589_5170502_5170557_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_94474.known	chr3	+	1083	5	FSM	ENSG00000189229.12	ENST00000433639.1	1083	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGAGGATGTGTGCCTG	NA	False	NA	NA	False	NA	NA	NA	6490478	6736129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_6490673_6717568_6717668_6724449_6724547_6732270_6732496_6735661
transcript_94476.known	chr3	+	1218	3	FSM	ENSG00000189229.12	ENST00000662846.1	1218	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTAGTCTGCCTGCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	6490732	6584542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_6490947_6578044_6578138_6583631
transcript_94477.known	chr3	+	668	2	FSM	ENSG00000189229.12	ENST00000660158.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTTTATGTATTTAC	NA	False	NA	NA	False	GATAAA	-14	NA	6490459	6558041	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_6490673_6557586
transcript_94492.known	chr3	-	524	2	FSM	ENSG00000227110.7	ENST00000455811.2	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACAGAGCCCTAATCTT	38	False	NA	NA	False	GGGGCT	-6	NA	8501629	8498484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_8498850_8501470
transcript_94497.known	chr3	+	1113	5	FSM	ENSG00000071282.12	ENST00000454244.4	1113	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	38.2295697072306	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACAGGATCCCACCGAG	0	True	NA	NA	False	NA	NA	NA	8501857	8567621	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_8501981_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_945.nic	chr1	-	881	4	ISM	ENSG00000178821.13	ENST00000310991.8	935	5	147	0	126	0	3prime_fragment	FALSE	canonical	3	19	junction_2	27.1088341484633	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	142	False	NA	-9	True	AATAAA	-17	NA	1919132	1917590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1918163_1918252_1918432_1918892_1918935_1919044
transcript_94500.known	chr3	+	8284	6	FSM	ENSG00000071282.12	ENST00000157600.8	8284	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	7.52063827078527	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGTCCAGAGGGTTTT	-1	True	NA	NA	False	AATAAA	-16	NA	8501822	8574668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_8501981_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_94512.known	chr3	-	4387	4	FSM	ENSG00000180914.11	ENST00000316793.8	4387	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	4.32049379893857	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAGCTTGATGGATGAAT	-3	True	NA	-4	True	AATAAA	-38	NA	8769613	8750380	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_8753225_8767265_8768330_8768495_8768592_8769230
transcript_94514.known	chr3	-	5857	13	FSM	ENSG00000070950.10	ENST00000264926.7	5857	13	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	22.2142346755908	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGCTAGTAAGTGCCT	-15	True	NA	1	True	AATAAA	-14	NA	8963472	8877074	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_8881460_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_94524.nic	chr3	-	1141	9	ISM	ENSG00000070950.10	ENST00000264926.7	5857	13	-56	35266	-26	-22232	5prime_fragment	FALSE	canonical	3	108	junction_1	23.4134042804544	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAGATGAAATCCACA	5736	False	NA	NA	False	NA	NA	NA	8963528	8912340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_94527.nic	chr3	-	609	5	ISM	ENSG00000070950.10	ENST00000413832.1	581	6	245	-191	-26	-54	3prime_fragment	FALSE	canonical	3	122	junction_1	19.6770805761424	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAGCCCTCAAAAAGAG	5736	False	NA	NA	False	AATAAA	-5	NA	8963528	8941604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_94528.known	chr3	-	582	5	FSM	ENSG00000070950.10	ENST00000421052.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.7299623588358	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTAGAAGAGATCGCTCCA	-13	True	NA	NA	False	AAAAAG	-37	NA	8963470	8941550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_8941805_8947242_8947291_8948508_8948571_8958919_8959002_8963334
transcript_94529.known	chr3	-	592	4	FSM	ENSG00000070950.10	ENST00000469793.1	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	7.34846922834953	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTCCTGCCCAAGCCC	14	True	NA	NA	False	NA	NA	NA	8963443	8946951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_8947291_8948508_8948571_8958919_8959002_8963334
transcript_94536.known	chr3	-	1554	2	FSM	ENSG00000196220.17	ENST00000490348.1	1554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	9249685	9235521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9236275_9248884
transcript_94544.known	chr3	+	3754	10	FSM	ENSG00000134077.16	ENST00000452837.7	3754	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	98.1960749511021	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	-12	True	NA	20	True	AATAAA	-21	NA	9363053	9386791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_94548.known	chr3	+	3961	10	FSM	ENSG00000134077.16	ENST00000345094.7	3961	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	69.1339726389241	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	-14	True	NA	20	True	AATAAA	-21	NA	9363051	9386791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_94554.known	chr3	+	2390	10	FSM	ENSG00000134077.16	ENST00000515662.6	2390	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.267326898627	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	32	False	NA	12	True	TTTAAA	-18	NA	9363097	9384870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9363729_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_94579.known	chr3	-	793	5	FSM	ENSG00000206573.10	ENST00000521609.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	55.4182957154043	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	1361	False	NA	-4	True	ATTAAA	-16	NA	9397428	9385794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9385924_9388086_9388128_9390279_9390498_9391426_9391827_9397423
transcript_94587.nic	chr3	-	615	5	FSM	ENSG00000206573.10	ENST00000685076.1	550	5	-70	5	-8	0	multi-exon	FALSE	canonical	3	72	junction_1	31.4443953670602	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	1277	False	NA	-4	True	ATTAAA	-16	NA	9397512	9385794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9385924_9388086_9388128_9390289_9390498_9391678_9391827_9397423
transcript_946.nnic	chr1	-	828	3	NIC	ENSG00000178821.13	novel	935	5	NA	NA	137	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	30.5	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	153	False	NA	-9	True	AATAAA	-17	NA	1919121	1917590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_1918163_1918252_1918432_1919044
transcript_94603.nic	chr3	+	790	4	ISM	ENSG00000134077.16	ENST00000345094.7	3961	10	-13	15619	-12	73	5prime_fragment	FALSE	canonical	3	211	junction_1	85.4413379004696	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAATCAGAATTCAAGTA	-27	True	NA	-48	True	AAAAAG	-21	NA	9363038	9371172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059
transcript_94609.known	chr3	-	415	4	FSM	ENSG00000206573.10	ENST00000520629.5	415	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	34.4222150491349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAATTAAAAGTTTTCC	2166	False	NA	-31	True	ATTAAA	-41	NA	9396623	9385821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9385924_9388086_9388128_9390289_9390498_9396559
transcript_9462.known	chr1	-	1629	8	FSM	ENSG00000143387.14	ENST00000271651.8	1629	8	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_5	6.19743198956682	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-1	True	NA	1	True	AATAAA	-21	NA	150808260	150796207	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
transcript_94624.known	chr3	-	1897	4	FSM	ENSG00000206573.10	ENST00000481221.7	1897	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	37.5854581808798	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	1315	False	NA	-30	True	TATAAA	-37	NA	9397474	9388873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391678_9391827_9395505_9395580_9397423
transcript_94630.known	chr3	-	667	4	FSM	ENSG00000206573.10	ENST00000467069.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	59.0987873536054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGATCTTGAATAGTG	1360	False	NA	NA	False	NA	NA	NA	9397429	9389491	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9389797_9390289_9390498_9391678_9391827_9397423
transcript_9464.known	chr1	-	3538	22	FSM	ENSG00000143437.21	ENST00000354396.6	3538	22	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	80.1887512539284	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGAGGTTTTTCCTC	9	True	NA	NA	False	NA	NA	NA	150876579	150810858	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816401_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_94640.known	chr3	-	608	3	FSM	ENSG00000254485.5	ENST00000517846.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTCAGGATTGATCCC	22	True	NA	NA	False	AATAAA	-19	NA	9363006	9349684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9350067_9355800_9355860_9362839
transcript_94642.known	chr3	-	583	3	FSM	ENSG00000206573.10	ENST00000489616.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCTAAGTATAAACATAAG	2155	False	NA	NA	False	TTTAAA	-19	NA	9396634	9390137	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391678_9391827_9396559
transcript_94643.known	chr3	-	1878	3	FSM	ENSG00000206573.10	ENST00000522525.6	1878	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	26	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTGGTTGAATCTG	1285	False	NA	-5	True	ATTAAA	-19	NA	9397504	9388848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391678_9391827_9397423
transcript_94646.known	chr3	-	1809	3	FSM	ENSG00000206573.10	ENST00000520447.1	1809	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTATTGTATTAAATATT	-3	True	NA	-39	True	TATAAA	-28	NA	9397495	9388882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391704_9391827_9397423
transcript_94654.known	chr3	-	2095	3	FSM	ENSG00000206573.10	ENST00000664441.2	2116	3	0	21	0	0	multi-exon	FALSE	canonical	3	29	junction_1	60.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-2	True	NA	-30	True	TATAAA	-37	NA	9397494	9388873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391426_9391827_9397423
transcript_94677.known	chr3	-	670	3	FSM	ENSG00000206573.10	ENST00000518437.3	1968	3	0	1298	0	35	multi-exon	FALSE	canonical	1	6	junction_2	21.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGAGTGAGACCTTGC	1285	False	NA	NA	False	NA	NA	NA	9397504	9391311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9391827_9395505_9395580_9397423
transcript_94679.known	chr3	-	484	2	FSM	ENSG00000254485.5	ENST00000466431.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTCAGGATTGATCCC	87	False	NA	NA	False	AATAAA	-19	NA	9362941	9349684	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9350067_9362839
transcript_94684.known	chr3	-	549	2	FSM	ENSG00000206573.10	ENST00000521708.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCGAGATGGCGCCCC	422	False	NA	NA	False	NA	NA	NA	9398367	9391346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9391827_9398298
transcript_94685.known	chr3	-	1831	2	FSM	ENSG00000206573.10	ENST00000469846.3	3045	2	53	1161	1	0	multi-exon	FALSE	canonical	3	150	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	2	True	NA	-15	True	AATAAA	-15	NA	9397441	9390013	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9391827_9397423
transcript_9469.known	chr1	-	2427	21	FSM	ENSG00000143437.21	ENST00000505755.5	2427	21	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_17	49.9530779832434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTCTGTAAACAGAA	127	False	NA	-49	True	AAAAAG	-2	NA	150876609	150811960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_94690.known	chr3	+	601	3	FSM	ENSG00000134077.16	ENST00000464045.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	3	440	junction_2	3.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	NA	False	NA	12	True	TTTAAA	-18	NA	9383179	9384870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9383310_9384211_9384336_9384523
transcript_94691.known	chr3	-	1115	5	FSM	ENSG00000206573.10	ENST00000519043.5	1115	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.6742416417845	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCACAGCACTTTAGTAGG	210	False	NA	NA	False	AATAAA	-17	NA	9398579	9385263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9385924_9388086_9388128_9390289_9390498_9391678_9391827_9398521
transcript_94692.known	chr3	-	2098	3	FSM	ENSG00000206573.10	ENST00000660363.1	2098	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	10	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	3210	False	NA	-30	True	TATAAA	-37	NA	9395579	9388873	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391426_9391827_9395505
transcript_94693.known	chr3	-	2309	5	FSM	ENSG00000206573.10	ENST00000661342.1	2309	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.0847644047277	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATAAAATCAATTTATAA	-4	True	NA	NA	False	AATAAA	-9	NA	9397496	9377378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9378265_9379470_9379671_9390289_9390498_9390884_9391827_9397423
transcript_94694.known	chr3	-	227	2	FSM	ENSG00000254485.5	ENST00000517687.1	227	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGTGTTCTAATGGAA	50	False	NA	NA	False	AATAAA	-18	NA	9362978	9355771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9355860_9362839
transcript_94695.nic	chr3	+	1849	17	ISM	ENSG00000144550.14	ENST00000383832.8	2042	21	1400	0	1400	0	3prime_fragment	TRUE	canonical	0	0	junction_1	6.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCATGCATGTTG	1397	False	NA	7	True	AATAAA	-17	NA	9705232	9729908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_9705501_9705717_9705721_9705986_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
transcript_94704.known	chr3	-	1453	12	FSM	ENSG00000134072.11	ENST00000256460.8	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	4.23093682844367	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTAGCGCTGTCTCCCTC	-1	True	NA	NA	False	AATAAA	-16	NA	9769947	9757346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9757622_9757728_9757847_9759487_9759576_9759671_9759751_9760655_9760769_9761460_9761537_9761630_9761758_9762913_9763053_9763138_9763214_9765758_9765891_9767666_9767782_9769831
transcript_94709.nic	chr3	-	1306	9	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	209.64359637251	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	9736	False	NA	-61	True	AATAAA	-14	NA	9844050	9837848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_9838208_9838984_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_94717.known	chr3	-	1225	9	FSM	ENSG00000156990.14	ENST00000383820.9	1225	9	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_1	77.8488118085305	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-11	True	NA	-61	True	AATAAA	-14	NA	9844016	9837848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_94722.known	chr3	+	2191	8	FSM	ENSG00000114026.22	ENST00000302008.12	2191	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	84.2358205835721	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTCGTGGTGAAA	14	False	NA	93	True	NA	NA	NA	9750072	9766737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9759186_9759287_9765808
transcript_94723.known	chr3	+	1948	8	FSM	ENSG00000114026.22	ENST00000449570.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	82.4670620704449	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGCAGTTTAACAAAAT	13	False	NA	NA	False	AAAAAG	-41	NA	9750071	9766540	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9759233_9759287_9765808
transcript_94726.known	chr3	+	903	8	FSM	ENSG00000250151.9	ENST00000424442.5	903	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	427.80149888585	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGGGGGCCAAGATGAT	-9	True	NA	NA	False	NA	NA	NA	9793081	9813351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9810620_9810710_9812942_9813112_9813247
transcript_94729.known	chr3	-	1178	8	FSM	ENSG00000156990.14	ENST00000433535.6	1178	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	206.463318874846	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9	True	NA	-61	True	AATAAA	-14	NA	9844014	9837848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9843464_9843602_9843889
transcript_94735.known	chr3	-	1005	8	FSM	ENSG00000156990.14	ENST00000424438.5	1005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	282.19489574348	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCCTCCCTCTGTTCCT	9844	False	NA	NA	False	GGGGCT	-10	NA	9843942	9838019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843724
transcript_94737.nic	chr3	-	1119	8	NIC	ENSG00000156990.14	novel	1225	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	208.731836555511	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	9736	False	NA	-61	True	AATAAA	-14	NA	9844050	9837848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_94739.known	chr3	+	1630	7	FSM	ENSG00000114026.22	ENST00000344629.12	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	41.424630354416	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	-23	True	NA	19	True	AATAAA	-23	NA	9749951	9757407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757060
transcript_94740.known	chr3	+	2220	7	FSM	ENSG00000114026.22	ENST00000302036.11	2220	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	61.9015795885336	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTCGTGGTGAAA	-31	True	NA	93	True	NA	NA	NA	9749943	9766737	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
transcript_94745.known	chr3	+	957	7	FSM	ENSG00000241553.13	ENST00000417500.5	957	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	400.158892052756	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCCTGGGCCGGGACAGA	-9	True	NA	-46	True	NA	NA	NA	9793081	9806436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9793125_9797658_9797778_9799878_9800068_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_94753.known	chr3	-	955	7	FSM	ENSG00000156990.14	ENST00000418713.5	955	7	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_3	68.8573404462686	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCACTCCAGTCTAGG	3	True	NA	NA	False	NA	NA	NA	9844002	9839940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_94754.known	chr3	+	1815	6	FSM	ENSG00000114026.22	ENST00000339511.9	1815	6	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	20.1454709550311	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAAATAGAAACATTT	6	True	NA	-11	True	NA	NA	NA	9749980	9757377	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766
transcript_94759.known	chr3	+	1433	6	FSM	ENSG00000241553.13	ENST00000397261.8	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	178.834672253453	3238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGCTGTGTGTGTGT	-9	True	NA	39	True	ATTAAA	-31	NA	9793081	9807101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_94762.known	chr3	+	942	6	FSM	ENSG00000241553.13	ENST00000498623.6	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	352.430078171543	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCGGGACAGATTTTTT	NA	False	NA	-40	True	NA	NA	NA	9792494	9806442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9792706_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_94763.known	chr3	+	926	6	FSM	ENSG00000241553.13	ENST00000433034.1	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	352.430078171543	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATACGTTATTGGTTG	26	False	NA	90	True	TTTAAA	-33	NA	9793116	9806572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9793182_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_94766.known	chr3	+	1950	5	FSM	ENSG00000114026.22	ENST00000349503.9	1950	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	79.6884558766199	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGGGTATTCTTTC	-31	True	NA	24	True	AATAAA	-33	NA	9749943	9766668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9765808
transcript_94767.known	chr3	+	747	5	FSM	ENSG00000114026.22	ENST00000429146.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	83.7925265163905	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGGACTCTTCCACCA	21	False	NA	NA	False	NA	NA	NA	9750354	9756865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9756470_9756622_9756766
transcript_9477.known	chr1	-	3703	17	FSM	ENSG00000143437.21	ENST00000471844.6	3703	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	114.315626665824	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTTGTGTGATCT	6	True	NA	-3	True	NA	NA	NA	150876705	150810093	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814113_150817927_150818031_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_94785.known	chr3	-	1178	4	FSM	ENSG00000156990.14	ENST00000433972.1	1178	4	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_3	64.8296914144197	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGTGTGCAGTCATTT	9727	False	NA	-12	True	AATAGA	-15	NA	9844059	9841256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9842083_9842198_9842244_9843464_9843602_9843889
transcript_94789.known	chr3	-	336	1	FSM	ENSG00000269886.1	ENST00000602768.1	336	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGGCTAATATTTATTG	NA	False	NA	NA	False	AATAAA	-24	NA	9813097	9812761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9812800_9813100
transcript_9479.known	chr1	-	2323	11	FSM	ENSG00000143418.20	ENST00000368954.10	2323	11	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_10	84.0509369370741	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	2	True	NA	-19	True	AATAAA	-19	NA	150974835	150965185	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974618
transcript_94790.known	chr3	-	1974	9	FSM	ENSG00000171148.14	ENST00000301964.7	1974	9	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	41.1855557204222	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCAGTCTTTGAATGTC	-25	True	NA	-4	True	AATAAA	-27	NA	9792473	9779966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
transcript_94791.known	chr3	+	1313	2	FSM	ENSG00000171135.15	ENST00000489724.2	1313	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGTGTTGCTTGAAA	0	True	NA	64	True	GGGGCT	-12	NA	9890573	9893883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9890812_9892808
transcript_94792.known	chr3	+	1637	2	FSM	ENSG00000171135.15	ENST00000647897.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCAGTATTTATTGCA	1	True	NA	6	True	ATTAAA	-25	NA	9890609	9894349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9890812_9892914
transcript_94793.nic	chr3	+	1998	12	NIC	ENSG00000163703.20	novel	2078	11	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_10	39.7121876914338	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	NA	False	NA	22	True	AATAAA	-23	NA	9933783	9945032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_94796.known	chr3	+	1994	12	FSM	ENSG00000163703.20	ENST00000326434.9	1994	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	39.496835316263	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	14	True	NA	22	True	AATAAA	-23	NA	9933855	9945032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_94800.known	chr3	+	2093	11	FSM	ENSG00000163703.20	ENST00000674067.2	2093	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	39.348316355341	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	2	True	NA	0	True	AATAAA	-12	NA	9933843	9945385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938018_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_94801.known	chr3	+	2780	11	FSM	ENSG00000163703.20	ENST00000682642.1	2780	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	36.9724221548981	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTAACATGAGAATTAAAT	-4	True	NA	-81	True	NA	NA	NA	9933837	9945304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943674
transcript_94803.known	chr3	+	2127	11	FSM	ENSG00000163703.20	ENST00000682570.1	2127	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	38.2956916636846	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	21	True	NA	0	True	AATAAA	-12	NA	9933862	9945385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943154_9943380_9943516_9944364
transcript_94804.known	chr3	+	2312	11	FSM	ENSG00000163703.20	ENST00000682783.1	2312	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.2981585921985	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	15	True	NA	0	True	AATAAA	-12	NA	9933856	9945385	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9934081_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_94813.known	chr3	+	2872	9	FSM	ENSG00000163703.20	ENST00000467713.6	2872	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	26.1817565300726	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAAAGGCATCAGTCTTA	-8	True	NA	15	True	AATAAA	-16	NA	9933833	9945025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_94820.known	chr3	+	2198	2	FSM	ENSG00000163703.20	ENST00000684659.1	2198	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTCATTTTCTCTTTT	-3	True	NA	4	True	AATAAA	-19	NA	9933838	9936258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9934613_9934834
transcript_94821.known	chr3	+	788	6	FSM	ENSG00000163703.20	ENST00000682355.1	788	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	44.8927611091142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCTCCCGTGTCTACT	17	True	NA	NA	False	NA	NA	NA	9933858	9939710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9939463
transcript_94825.known	chr3	+	614	4	FSM	ENSG00000230082.1	ENST00000431558.1	614	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACCACTGGTTTATTG	8	True	NA	NA	False	AGTAAA	-16	NA	9947403	9954787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9947605_9948066_9948181_9948354_9948470_9954603
transcript_94828.known	chr3	-	1475	3	FSM	ENSG00000163704.12	ENST00000411976.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGAAGTCATTTGCC	-1	True	NA	3	True	AATAAA	-19	NA	9952390	9948579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9948914_9949100_9950173_9952321
transcript_9483.known	chr1	-	2544	11	FSM	ENSG00000143418.20	ENST00000271688.10	2544	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	200.546278948277	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGTAATATTTTCTTTT	2168	False	NA	-6	True	AATAAA	-32	NA	150975003	150965172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969132_150974618
transcript_94830.known	chr3	-	3368	5	FSM	ENSG00000163704.12	ENST00000295984.7	3368	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	28.0568619057798	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	15	True	NA	-34	True	AATAAA	-15	NA	9952374	9945541	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9945712_9946084_9948002_9948757_9948914_9949100_9950173_9952321
transcript_94854.nnic	chr3	+	687	4	FSM	ENSG00000180385.9	ENST00000693066.1	671	4	-20	4	0	-4	multi-exon	FALSE	canonical	3	17	junction_1	11.0453610171873	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCGGTTCTTGCAAATC	NA	False	NA	18	True	AATAAA	-16	NA	9986884	10006986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9987265_9987814_9987906_9988711_9988748_10006806
transcript_94858.known	chr3	+	559	4	FSM	ENSG00000180385.9	ENST00000366264.6	559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.55902608401044	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCCCTGGCTCAACAAG	NA	False	NA	NA	False	NA	NA	NA	9986892	10002765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9987265_9987905_9988008_9988711_9988748_10002716
transcript_9486.nnic	chr1	-	2220	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-179	-73	intron_retention	FALSE	canonical	3	16	junction_10	199.966622214809	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	1989	False	NA	-92	True	AATAAA	-16	NA	150975182	150965258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974995
transcript_94864.nnic	chr3	+	622	3	NIC	ENSG00000180385.9	novel	671	4	NA	NA	-26	-4	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	16	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCGGTTCTTGCAAATC	NA	False	NA	18	True	AATAAA	-16	NA	9986858	10006986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_9987265_9988711_9988748_10006806
transcript_94868.known	chr3	+	2882	2	FSM	ENSG00000180385.9	ENST00000326237.3	2882	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAC	1	True	NA	NA	False	NA	NA	NA	9986910	10005244	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9987265_10002716
transcript_94869.known	chr3	-	942	3	FSM	ENSG00000186162.11	ENST00000335507.10	1833	3	6	885	6	-885	multi-exon	FALSE	canonical	0	0	junction_1	31	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTTTTCTTTGAGACA	-22	True	NA	NA	False	NA	NA	NA	10026360	10015122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10015527_10023529_10023748_10026040
transcript_9487.nnic	chr1	-	2200	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-182	-73	intron_retention	FALSE	canonical	3	16	junction_10	199.966622214809	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	1986	False	NA	-92	True	AATAAA	-16	NA	150975185	150965258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975018
transcript_94871.known	chr3	-	854	3	FSM	ENSG00000186162.11	ENST00000424471.2	1136	3	18	264	9	-263	multi-exon	FALSE	canonical	3	10	junction_1	26	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTTGGCCAAAGGAGAA	-19	True	NA	NA	False	GGGGCT	-12	NA	10026357	10017752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10018072_10023529_10023748_10026040
transcript_94873.known	chr3	-	1088	3	FSM	ENSG00000186162.11	ENST00000424691.2	1130	3	30	12	1	-7	multi-exon	FALSE	canonical	3	46	junction_1	8	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTATCTTTGCCTGTGT	26	False	10026391	-7	True	AATAAA	-11	NA	10026365	10017496	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10018072_10023559_10023748_10026040
transcript_94875.known	chr3	-	1107	2	FSM	ENSG00000186162.11	ENST00000445082.1	1107	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATTGAATTCATTAA	12	True	NA	NA	False	AAAAAG	-12	NA	10026326	10022926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10023748_10026040
transcript_94876.known	chr3	-	1794	3	FSM	ENSG00000186162.11	ENST00000432401.6	1813	3	18	1	9	0	multi-exon	FALSE	canonical	1	2	junction_1	30	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATCATATAGTCTTT	-19	True	NA	NA	False	ATTAAA	-17	NA	10026357	10014237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10015527_10023559_10023748_10026040
transcript_94877.known	chr3	-	770	2	FSM	ENSG00000186162.11	ENST00000433871.5	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCTGTGTTCTTTGG	2644	False	NA	0	True	AATAAA	-18	NA	10023747	10017489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10018072_10023559
transcript_94878.nic	chr3	+	2814	27	ISM	ENSG00000144554.13	ENST00000419585.5	5185	44	-65	28966	-3	0	5prime_fragment	FALSE	canonical	3	35	junction_1	20.1159729285935	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGGAAAAATAGGTA	-15	True	NA	16	True	NA	NA	NA	10026433	10072964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870
transcript_94880.nic	chr3	+	1882	17	ISM	ENSG00000144554.13	ENST00000419585.5	5185	44	-65	52314	-3	112	5prime_fragment	FALSE	canonical	3	35	junction_1	23.5921564031353	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTGTTAATTCATTCA	-15	True	NA	NA	False	AATAAA	-15	NA	10026433	10049616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373
transcript_94885.nic	chr3	+	328	3	ISM	ENSG00000144554.13	ENST00000419585.5	5185	44	-65	69061	-3	518	5prime_fragment	FALSE	canonical	3	35	junction_1	32.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATATTGCTAATGAAGT	-15	True	NA	NA	False	AAAAAG	-10	NA	10026433	10032869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_10026627_10028624_10028722_10032831
transcript_94887.known	chr3	+	5096	44	FSM	ENSG00000144554.13	ENST00000675286.1	5096	44	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_1	20.9290955763533	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTGCCTCATTTATC	-12	True	NA	22	True	AATAAA	-18	NA	10026436	10101932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_94888.known	chr3	+	5185	44	FSM	ENSG00000144554.13	ENST00000419585.5	5185	44	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	23.989812151705	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTCAGTTGCCTCATTTA	50	False	NA	20	True	AATAAA	-16	NA	10026498	10101930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10026627_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_9489.nnic	chr1	-	2096	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-489	-73	intron_retention	FALSE	canonical	1	5	junction_10	203.156196065983	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGCAATAAGTGTCAGAC	1679	False	NA	-92	True	AATAAA	-16	NA	150975492	150965258	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975429
transcript_94894.known	chr3	+	1150	3	FSM	ENSG00000254999.4	ENST00000530758.2	1150	3	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	8	19311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCTTACAGTCTTTT	-5	True	NA	20	True	AATAAA	-21	NA	10115674	10127190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10115820_10125625_10125709_10126268
transcript_949.nnic	chr1	-	679	2	NIC	ENSG00000178821.13	novel	935	5	NA	NA	-202	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	275	False	NA	-9	True	AATAAA	-17	NA	1918999	1917590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_1918163_1918892
transcript_94903.nnic	chr3	+	1944	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	110	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATAGGCAGGGTGTGTT	-28	True	NA	7	True	ATTAAA	-15	NA	10141773	10153662	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150927_10153395
transcript_94905.nnic	chr3	+	2113	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	41.8436242322398	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-28	True	NA	12	True	ATTAAA	-20	NA	10141773	10153667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_94908.nnic	chr3	+	1998	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	41.8436242322398	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-28	True	NA	12	True	ATTAAA	-20	NA	10141773	10153667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150945_10153364
transcript_94916.known	chr3	+	4414	3	FSM	ENSG00000134086.8	ENST00000256474.3	4414	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	11.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	-24	True	NA	12	True	ATTAAA	-20	NA	10141777	10153667	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10142188_10146513_10146637_10149786
transcript_94917.known	chr3	+	2696	2	FSM	ENSG00000134086.8	ENST00000345392.2	2696	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGGCATGGTGGCT	-14	True	NA	NA	False	NA	NA	NA	10141787	10152082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10142188_10149786
transcript_94919.nnic	chr3	-	535	3	Antisense	novelGene_ENSG00000134070.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	0.5	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCCTCATCTCCACCCTG	NA	False	NA	NA	False	AATAAA	-20	NA	10226506	10194767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_10195071_10222741_10222822_10226354
transcript_94923.nnic	chr3	-	767	2	Antisense	novelGene_ENSG00000134070.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAAATTCCCTCTTG	NA	False	NA	NA	False	AAAAAG	-4	NA	10226506	10222206	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_10222822_10226354
transcript_94925.known	chr3	+	3431	13	FSM	ENSG00000134070.5	ENST00000256458.5	3431	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.09993386139236	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAACTTGTAATTAGTT	5	True	NA	NA	False	AATAAA	-20	NA	10164918	10243745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10165049_10177837_10178021_10200368_10200516_10209588_10209693_10213206_10213402_10213483_10213549_10216933_10217049_10219679_10219790_10222635_10222832_10226370_10226434_10234458_10234660_10238747_10239040_10242115
transcript_9494.nic	chr1	+	1446	9	ISM	ENSG00000143379.13	ENST00000692314.1	4295	22	-39	19405	3	0	5prime_fragment	FALSE	canonical	2	7	junction_1	20.2449839466471	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	3	True	NA	11	True	AATAAA	-22	NA	150926265	150945320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_150926349_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_94940.known	chr3	-	1363	10	FSM	ENSG00000157020.18	ENST00000337354.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	407.26267799651	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	6	True	NA	-22	True	AATAAA	-17	NA	10321082	10300930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319173_10321049
transcript_94942.known	chr3	-	1479	10	FSM	ENSG00000157020.18	ENST00000383801.6	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	412.827677558112	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAACTAAATAAAGTCATA	4	True	NA	-52	True	NA	NA	NA	10321084	10300960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319317_10321049
transcript_9495.nic	chr1	+	1546	9	ISM	ENSG00000143379.13	ENST00000534805.5	2043	13	-60	5463	-4	0	5prime_fragment	FALSE	canonical	3	38	junction_1	10.6272056534161	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	25	False	NA	11	True	AATAAA	-22	NA	150926334	150945320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_94956.known	chr3	-	1467	9	FSM	ENSG00000157020.18	ENST00000397109.7	1467	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_8	339.773086044201	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	6625	False	NA	-22	True	AATAAA	-17	NA	10321041	10300930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320870
transcript_94958.known	chr3	-	1603	9	FSM	ENSG00000157020.18	ENST00000397117.5	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	389.038478174075	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	27	True	NA	-41	True	ACTAAA	-2	NA	10321061	10300949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
transcript_9496.known	chr1	+	1478	9	FSM	ENSG00000143379.13	ENST00000368962.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	19.6050854372023	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	-43	True	NA	11	True	AATAAA	-22	NA	150926348	150945320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150926464_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_94964.known	chr3	-	656	4	FSM	ENSG00000157017.16	ENST00000481287.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGTTCCAAATGGGA	2587	False	NA	NA	False	AATAAA	-14	NA	10290357	10285749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10285895_10286703_10286813_10289761_10289879_10290072
transcript_94965.known	chr3	-	1359	9	FSM	ENSG00000157020.18	ENST00000350697.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_8	118.632244246663	3690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-24	True	NA	-22	True	AATAAA	-17	NA	10321112	10300930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_94966.known	chr3	-	883	5	FSM	ENSG00000157020.18	ENST00000397105.7	883	5	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_4	151.328079020385	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATTCTTTACCCAACTT	-5	True	NA	NA	False	TATAAA	-4	NA	10321093	10311572	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_94970.known	chr3	+	4959	19	FSM	ENSG00000197548.13	ENST00000354449.7	4959	19	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_13	14.6599311133072	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGTATTAAGGTTT	-9	True	NA	NA	False	AATAAA	-17	NA	11272415	11557665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
transcript_94972.known	chr3	+	2296	18	FSM	ENSG00000197548.13	ENST00000354956.9	2296	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	28.6908108940439	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTCCTCCATGCAGTTT	-9	True	NA	44	True	NA	NA	NA	11272415	11555083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11426803_11426927_11554810
transcript_94980.known	chr3	+	534	2	FSM	ENSG00000197548.13	ENST00000470474.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAAGAGCTCTGTCAC	4	True	NA	NA	False	NA	NA	NA	11272381	11299170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_11272431_11298685
transcript_94981.known	chr3	-	3725	6	FSM	ENSG00000144560.16	ENST00000273038.7	3725	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	42.8924235734005	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGTACGTGTGCAGT	-6	True	NA	-3	True	AATAAA	-14	NA	11720746	11556069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11720393
transcript_94982.known	chr3	-	3775	5	FSM	ENSG00000144560.16	ENST00000430365.7	3775	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	33.4617318738884	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-1	True	NA	-2	True	AATAAA	-15	NA	11643915	11556068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11643436
transcript_94984.known	chr3	-	938	4	FSM	ENSG00000144560.16	ENST00000451674.6	938	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	61.8834029086601	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGAACATCTGTCTAAT	9091	False	NA	NA	False	NA	NA	NA	11582391	11558342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11582285
transcript_94998.known	chr3	-	1213	8	FSM	ENSG00000144559.11	ENST00000455809.6	1326	8	113	0	7	0	multi-exon	FALSE	canonical	3	98	junction_5	12.6248863401633	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	82	False	NA	-1	True	AATAAA	-24	NA	11846772	11790441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_95002.known	chr3	-	1297	7	FSM	ENSG00000144559.11	ENST00000273037.9	1297	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	40.5202281445809	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846919	11790441	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11790582_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_95010.known	chr3	+	3320	13	FSM	ENSG00000157152.17	ENST00000621198.5	3320	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	9.07683253612674	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTGAATGTTAATAAGTA	0	True	NA	11	True	AATAAA	-24	NA	12004387	12192032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12004929_12140650_12140709_12141904_12141997_12145678_12145836_12151236_12151327_12161545_12161609_12162011_12162155_12167233_12167309_12168375_12168479_12169756_12169907_12183311_12183373_12187368_12187613_12190489
transcript_95011.known	chr3	-	1194	5	FSM	ENSG00000157150.5	ENST00000287814.5	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	4.26468052730799	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGGCTGTGTATCC	19	True	NA	-23	True	CATAAA	-31	NA	12158912	12153067	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
transcript_95013.known	chr3	+	1853	2	FSM	ENSG00000132170.24	ENST00000682604.1	1853	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACCATATTATGAAATTG	9174	False	NA	NA	False	ATTAAA	-2	NA	12415731	12434327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12417155_12433897
transcript_95014.known	chr3	-	3191	17	FSM	ENSG00000132155.14	ENST00000251849.9	3191	17	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_13	40.1593991955806	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	5	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_95015.known	chr3	-	2354	16	FSM	ENSG00000132155.14	ENST00000684903.1	3129	16	76	699	0	-405	multi-exon	FALSE	canonical	3	29	junction_14	113.359879244035	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGGAAGCCATTTGC	-3	True	NA	NA	False	NA	NA	NA	12664125	12584332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12618514_12618748_12663812
transcript_95017.known	chr3	+	2425	13	FSM	ENSG00000154743.19	ENST00000680275.1	2425	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	41.7554886611728	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	3	True	NA	NA	False	AATAGA	-10	NA	12484496	12533653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12501667_12501725_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_95018.known	chr3	+	2383	13	FSM	ENSG00000154743.19	ENST00000680376.1	2383	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	44.5928338787	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTGAAACCTCCTCTC	NA	False	NA	NA	False	NA	NA	NA	12484434	12533478	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12506707_12506836_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_95019.known	chr3	+	2062	13	FSM	ENSG00000154743.19	ENST00000681482.1	2062	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	33.7699529496596	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATGAAAATAATTTTGT	NA	False	NA	49	True	TTTAAA	-9	NA	12484420	12539658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_95021.known	chr3	+	2444	12	FSM	ENSG00000154743.19	ENST00000679699.1	2444	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	24.3324087525769	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-10	NA	12484420	12533653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_95023.known	chr3	+	1912	12	FSM	ENSG00000154743.19	ENST00000446004.6	1912	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	36.7771937954906	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCTGTAAATGGATTC	NA	False	NA	11	True	AATAAA	-13	NA	12484420	12539620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12539160
transcript_95025.known	chr3	+	1930	12	FSM	ENSG00000154743.19	ENST00000679670.1	1930	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	42.2315537510924	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATGCTGTAAATGGAT	NA	False	NA	9	True	AATAAA	-11	NA	12484434	12539618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_95026.known	chr3	+	2149	12	FSM	ENSG00000154743.19	ENST00000402228.7	2149	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	34.9502598153007	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	-3	True	NA	21	True	AATAAA	-24	NA	12484490	12533317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_95029.known	chr3	+	2753	12	FSM	ENSG00000154743.19	ENST00000284995.11	2753	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.5234379602473	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-14	True	NA	NA	False	AATAGA	-15	NA	12484479	12533658	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_95033.known	chr3	+	2358	11	FSM	ENSG00000154743.19	ENST00000415684.6	2358	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	36.337308651027	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAGA	-16	NA	12484434	12533659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_95036.known	chr3	+	1879	11	FSM	ENSG00000154743.19	ENST00000680817.1	1879	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	45.3101533875135	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATGCTGTAAATGGAT	NA	False	NA	9	True	AATAAA	-11	NA	12484434	12539618	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_95037.known	chr3	+	2244	11	FSM	ENSG00000154743.19	ENST00000680943.1	2244	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	44.2135725767552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATAAAGCCTTTTTG	13	False	NA	-13	True	AATGAA	-20	NA	12484562	12533283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_95038.known	chr3	+	2107	10	FSM	ENSG00000154743.19	ENST00000681433.1	2107	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	38.207038327745	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAGCACATGCCTGTAA	NA	False	NA	NA	False	NA	NA	NA	12484434	12533520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_9504.known	chr1	+	668	5	FSM	ENSG00000143379.13	ENST00000448029.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	28.5175384631984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGTCAGCTCAAGATG	-47	True	NA	NA	False	NA	NA	NA	150926344	150941351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150926532_150927703_150927975_150929966_150930119_150939939_150939975_150941328
transcript_95041.known	chr3	+	2342	10	FSM	ENSG00000154743.19	ENST00000679785.1	2342	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	46.3547778777848	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAGCACATGCCTGTAA	13	False	NA	NA	False	NA	NA	NA	12484562	12533520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_95043.known	chr3	+	1679	8	FSM	ENSG00000075975.17	ENST00000448482.1	1679	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.7725166640322	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTCTTACCAAAGGAG	-15	True	NA	-46	True	AGTAAA	-25	NA	12557089	12582626	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12557177_12568874_12568998_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_95051.known	chr3	+	1436	7	FSM	ENSG00000075975.17	ENST00000411987.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	48.0465630635764	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAACAACTAACAAACA	-18	True	NA	62	True	NA	NA	NA	12557086	12582503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12557177_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_95061.known	chr3	+	2913	5	FSM	ENSG00000154743.19	ENST00000679537.1	2913	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	24.1389208540896	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAACTCTGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	12484434	12505766	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261
transcript_95067.known	chr3	-	1124	4	FSM	ENSG00000225526.6	ENST00000564146.4	1124	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTATGGCTTTCCTTCAA	NA	False	NA	NA	False	AATAAA	-17	NA	12545499	12539775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12540434_12541859_12542023_12543179_12543230_12545246
transcript_95068.known	chr3	-	901	3	FSM	ENSG00000225526.6	ENST00000561645.2	901	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTACTAAAAATATAAAAT	NA	False	NA	NA	False	NA	NA	NA	12545522	12539971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12540434_12541859_12542023_12545246
transcript_95069.known	chr3	-	984	12	FSM	ENSG00000088726.16	ENST00000264728.8	984	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.715818897637437	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCAGAGCAGCATTCTGA	64	False	NA	NA	False	NA	NA	NA	12769457	12734706	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12734794_12735554_12735618_12736577_12736653_12736763_12736836_12737706_12737755_12738135_12738169_12738552_12738589_12742453_12742508_12743899_12743990_12748654_12748793_12749759_12749841_12769250
transcript_95088.known	chr3	-	555	4	FSM	ENSG00000144713.13	ENST00000457131.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	6921.4670089191	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAGGCAGCTCATGTG	13	True	NA	-81	True	AAGAAA	-1	NA	12841544	12836101	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840342_12841493
transcript_95090.known	chr3	-	2094	4	FSM	ENSG00000144713.13	ENST00000429711.7	2094	4	0	0	0	0	multi-exon	FALSE	canonical	3	10561	junction_3	1992.09526769067	109552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCGTTTTGAATTTTAA	-8	True	NA	-26	True	NA	NA	NA	12841565	12834484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840243_12841493
transcript_95091.known	chr3	-	631	3	FSM	ENSG00000144713.13	ENST00000452606.2	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	10561	junction_2	2338	1488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTTTCCAAAATGTT	14	True	NA	NA	False	NA	NA	NA	12841543	12839050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12839531_12840141_12840243_12841493
transcript_95092.known	chr3	-	567	4	FSM	ENSG00000144713.13	ENST00000273223.10	567	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	5990.4395683641	4822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCATCTTCCTTCCTTG	11	True	NA	-26	True	AATAAA	-15	NA	12841546	12836046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12836224_12839348_12839585_12840141_12840243_12841493
transcript_95093.known	chr3	-	1734	3	FSM	ENSG00000144713.13	ENST00000396953.6	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	14107	junction_1	565	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTGCCATCTGGCA	28	True	NA	-39	True	AATAAA	-2	NA	12841529	12836059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12836224_12839348_12839531_12840141
transcript_95095.known	chr3	-	7206	40	FSM	ENSG00000132182.12	ENST00000254508.7	7206	40	0	0	0	0	multi-exon	FALSE	non_canonical	3	209	junction_31	30.9311763853855	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGTGATCGTTGCTGA	10	True	NA	-21	True	AATAAA	-20	NA	13420322	13316234	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_13317782_13319071_13319156_13319229_13319326_13319762_13319980_13321584_13321836_13322192_13322340_13323308_13323433_13325794_13325932_13327216_13327438_13328770_13328947_13330459_13330635_13332292_13332385_13335453_13335613_13336786_13336919_13337836_13337918_13339853_13340034_13340235_13340299_13341747_13341884_13341995_13342124_13343174_13343304_13351878_13351981_13352079_13352185_13353553_13353661_13353914_13354108_13358221_13358396_13360269_13360492_13365945_13366092_13371833_13372033_13373717_13373874_13375503_13375642_13376290_13376432_13377455_13377563_13378911_13378981_13379562_13379722_13386274_13386408_13388302_13388454_13391210_13391308_13397356_13397489_13399724_13399862_13420059
transcript_95099.known	chr3	+	2819	10	FSM	ENSG00000163517.15	ENST00000295757.8	2819	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	21.3148067702788	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	3	True	NA	7	True	AATAAA	-19	NA	13480305	13506416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_9510.nic	chr1	+	944	3	ISM	ENSG00000143379.13	ENST00000368963.5	1045	8	-89	14654	-4	0	5prime_fragment	FALSE	canonical	3	38	junction_1	18.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGCAACCGCATTAAAC	25	False	NA	NA	False	TATAAA	-33	NA	150926334	150930456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_150926518_150927703_150927975_150929966
transcript_95104.known	chr3	+	1018	7	FSM	ENSG00000163517.15	ENST00000402271.5	1018	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	29.7078366017379	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGGGCTTGAGGCCT	0	True	NA	NA	False	NA	NA	NA	13480302	13504849	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_95107.known	chr3	+	967	6	FSM	ENSG00000163517.15	ENST00000404040.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	32.4382490279608	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAAGGCAGAGCCTGTGTC	21	True	NA	NA	False	NA	NA	NA	13480323	13504882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13502883_13502981_13504093_13504273_13504467
transcript_95112.known	chr3	+	524	2	FSM	ENSG00000224514.3	ENST00000438915.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCAATCTGTCAGGCA	NA	False	NA	NA	False	AATAAA	-8	NA	13650695	13746629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_13650834_13746243
transcript_95114.known	chr3	-	584	5	FSM	ENSG00000163528.13	ENST00000420103.1	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	139.227332086771	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCCAGCGGTCCCTGT	-3	True	NA	NA	False	NA	NA	NA	14124749	14113143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14113195_14116425_14116525_14119144_14119314_14121916_14122087_14124654
transcript_95116.known	chr3	-	1603	4	FSM	ENSG00000163528.13	ENST00000295767.9	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	139.045156533968	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-21	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14113195_14116425_14116525_14121916_14122087_14124654
transcript_95120.known	chr3	-	1433	3	FSM	ENSG00000163528.13	ENST00000396914.4	1433	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	16.5	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-21	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14113195_14116425_14116525_14124654
transcript_95121.known	chr3	-	3650	16	FSM	ENSG00000154767.15	ENST00000285021.12	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	29.1520153677237	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTCTATATTTTCT	-13	True	NA	-11	True	AATAAA	-14	NA	14178601	14145146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
transcript_95125.known	chr3	+	3230	12	FSM	ENSG00000170876.8	ENST00000306077.5	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_10	17.7703439462196	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGGGACTTTAAC	-3	True	NA	22	True	AATAAA	-14	NA	14125051	14143680	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14125206_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865_14132936_14133738_14133810_14134769_14134892_14135157_14135233_14135806_14135909_14139179_14139298_14141592
transcript_95130.nnic	chr3	-	2528	12	NIC	ENSG00000154767.15	novel	3650	16	NA	NA	-73	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	89.690652930729	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTCTATATTTTCT	NA	False	NA	-11	True	AATAAA	-14	NA	14178694	14145146	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
transcript_95135.known	chr3	-	557	4	FSM	ENSG00000154767.15	ENST00000511155.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.748372561499	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAGAAAGAAGGTAAGC	18	False	NA	NA	False	NA	NA	NA	14178621	14168270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14168381_14170437_14170551_14172866_14173063_14178483
transcript_95136.nic	chr3	-	498	3	ISM	ENSG00000154767.15	ENST00000476581.6	2944	15	-93	24749	-73	-2207	5prime_fragment	FALSE	canonical	3	295	junction_1	14.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGGAAGAAAGTGAAAA	NA	False	NA	NA	False	AATGAA	-13	NA	14178694	14170477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_14170551_14172866_14173063_14178465
transcript_95137.nic	chr3	+	652	2	ISM	ENSG00000170876.8	ENST00000432444.1	908	7	6	3600	6	-3600	5prime_fragment	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATTGAGTA	1	True	NA	NA	False	ACTAAA	-12	NA	14125020	14129321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_14125206_14128854
transcript_9514.known	chr1	+	590	3	FSM	ENSG00000143379.13	ENST00000423081.1	590	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGGGATGAGCTTTGG	248	False	NA	NA	False	NA	NA	NA	150926639	150930116	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150926809_150927703_150927975_150929966
transcript_95140.known	chr3	+	3359	4	FSM	ENSG00000170860.4	ENST00000306024.4	3359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2475	junction_1	809.6307800473	17549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTTGATGTTTCTCTG	-19	True	NA	6	True	AATAAA	-33	NA	14178816	14201122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14178882_14181559_14181671_14183936_14184033_14198035
transcript_95146.known	chr3	+	2940	11	FSM	ENSG00000154781.17	ENST00000383794.7	2940	11	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_7	33.3438150186808	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCAGCTGCCTTTTTT	-2	True	NA	25	True	AATAAA	-17	NA	14651761	14672655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048_14668182_14669933_14670087_14670895
transcript_9515.known	chr1	+	2043	13	FSM	ENSG00000143379.13	ENST00000534805.5	2043	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	10.9781980913688	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAATGCAGGAGATAGAA	3	True	NA	NA	False	NA	NA	NA	150926394	150950783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949366_150949526_150950457
transcript_95150.nic	chr3	+	951	9	ISM	ENSG00000154781.17	ENST00000383794.7	2940	11	-28	4578	-28	779	5prime_fragment	FALSE	canonical	3	100	junction_7	35.5527776692624	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATAAAGGAAAAGCGAAAGG	0	True	NA	NA	False	NA	NA	NA	14651733	14668077	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048
transcript_95156.known	chr3	+	5768	19	FSM	ENSG00000154783.12	ENST00000543601.5	5768	19	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_17	15.0379150446094	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGTGATTAGACAGTG	8265	False	NA	68	True	ATTAAA	-19	NA	14818961	14934565	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14821597_14864127_14864261_14880571_14880631_14880741_14880773_14897508_14897670_14897938_14898096_14898738_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14932576_14932732_14933130
transcript_9516.known	chr1	+	623	2	FSM	ENSG00000143379.13	ENST00000481219.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGCAACCGCATTAAAC	1450	False	NA	NA	False	TATAAA	-33	NA	150927841	150930456	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150927975_150929966
transcript_95163.known	chr3	-	3818	2	FSM	ENSG00000225733.7	ENST00000655923.1	3818	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGTAATTGCTGTTAG	891	False	NA	-25	True	AATAAA	-9	NA	14947538	14942788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14946155_14947086
transcript_95164.known	chr3	-	3754	2	FSM	ENSG00000225733.7	ENST00000665738.1	3754	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAAACCTCACGTAATT	-40	True	NA	-33	True	AATAAA	-1	NA	14947509	14942796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14946155_14947113
transcript_95168.known	chr3	-	1184	6	FSM	ENSG00000225733.7	ENST00000430166.5	1184	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.54919333848297	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGAGAGTGCATGTGCA	5	True	NA	-3	True	AATAAA	-22	NA	14948424	14920346	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14920484_14921308_14921460_14922300_14922405_14923090_14923349_14923976_14924099_14948012
transcript_95174.known	chr3	-	823	2	FSM	ENSG00000131368.8	ENST00000496484.1	823	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACATCCATGACATATT	NA	False	NA	NA	False	AATACA	-22	NA	15049967	15042459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15043023_15049707
transcript_95175.known	chr3	-	540	2	FSM	ENSG00000131368.8	ENST00000474866.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATTGTCTCAGCTGGTT	NA	False	NA	NA	False	ACTAAA	-38	NA	15050102	15045098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15045244_15049707
transcript_95176.known	chr3	-	4572	4	FSM	ENSG00000131368.8	ENST00000253686.7	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	55.1180551180827	2331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCATGTATAAATATCA	-34	True	NA	1	True	AATAAA	-21	NA	15065315	15048511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15052634_15053379_15053468_15059368_15059476_15065060
transcript_95177.known	chr3	-	1281	3	FSM	ENSG00000131368.8	ENST00000444840.6	1281	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	366.5	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGACATTGGGGCCCTG	-36	True	NA	NA	False	NA	NA	NA	15065317	15051716	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15052634_15059368_15059476_15065060
transcript_95178.known	chr3	-	1119	4	FSM	ENSG00000131368.8	ENST00000449354.6	1119	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	327.380512553817	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGCCACATTGAAACA	21	True	NA	NA	False	TATAAA	-32	NA	15065260	15049211	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15049936_15053379_15053468_15059368_15059476_15065060
transcript_95179.known	chr3	-	6678	14	FSM	ENSG00000131381.12	ENST00000253699.7	6678	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	23.3002018936322	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGGGTGTGTGTGTCTG	-6	True	NA	-11	True	AATAAA	-14	NA	15099148	15070072	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15098118_15098275_15099034
transcript_95183.nic	chr3	-	1067	4	ISM	ENSG00000131381.12	ENST00000441057.5	1352	9	-18	10936	-3	0	5prime_fragment	FALSE	canonical	3	44	junction_3	18.624953392932	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGACTGTTCTTTA	-9	True	NA	NA	False	AGTAAA	-15	NA	15099151	15095670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_15096289_15096534_15096711_15098118_15098275_15099034
transcript_95185.known	chr3	-	582	3	FSM	ENSG00000131381.12	ENST00000507357.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	43	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGATGTCAAAGGGCAAAT	6	True	NA	NA	False	NA	NA	NA	15099136	15095997	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15096289_15096534_15096711_15099021
transcript_95188.known	chr3	-	3005	13	FSM	ENSG00000131381.12	ENST00000476527.6	3005	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	20.018567769837	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAATAGAAACTAG	NA	False	NA	-69	True	NA	NA	NA	15099163	15073604	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15099034
transcript_95189.known	chr3	-	3279	9	FSM	ENSG00000131370.16	ENST00000383791.8	3279	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	3.04138126514911	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGTTGGCCAATCAT	-23	True	NA	NA	False	ATTAAA	-19	NA	15332586	15254352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15256304_15256852_15257114_15258830_15259051_15259760_15259804_15262158_15262290_15269712_15269878_15304102_15304232_15330503_15330567_15332270
transcript_9519.known	chr1	+	1551	14	FSM	ENSG00000143412.10	ENST00000368947.9	1551	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	3.52673642656851	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	-8	True	NA	19	True	NA	NA	NA	150982291	150995634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
transcript_95194.known	chr3	-	4020	7	FSM	ENSG00000206562.12	ENST00000443029.5	4020	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	88.0864474378563	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTCTTGACTTAT	-1	True	NA	2	True	AATAAA	-21	NA	15427518	15381274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15384188_15411244_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_95199.nic	chr3	-	1729	7	NIC	ENSG00000206562.12	novel	2618	6	NA	NA	-601	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	78.5799309973962	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCCTTCAGAGCAAA	633	False	NA	-14	True	AATAAA	-23	NA	15428145	15411335	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_15411438_15414020_15414163_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_95206.known	chr3	+	4447	6	FSM	ENSG00000144597.14	ENST00000396842.7	4447	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	3.70944739819828	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	5	True	NA	12	True	AATAAA	-20	NA	15427597	15442613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15427883_15429912_15430008_15432086_15432224_15434347_15434539_15436341_15436576_15439108
transcript_95209.known	chr3	-	2618	6	FSM	ENSG00000206562.12	ENST00000383790.8	2618	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	59.9546495277889	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCTCCATATCTGAT	-1	True	NA	NA	False	NA	NA	NA	15427544	15409759	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_95214.nic	chr3	-	1762	6	NIC	ENSG00000206562.12	novel	615	4	NA	NA	-601	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_1	70.7004950477718	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	633	False	NA	-37	True	AATAAA	-18	NA	15428145	15413668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_9522.known	chr1	-	2623	10	FSM	ENSG00000143409.17	ENST00000683666.2	2542	10	0	-81	0	81	multi-exon	FALSE	canonical	1	4	junction_9	5.29150262212918	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCAAAAAGGTGAAACCC	-19	True	NA	70	True	NA	NA	NA	151006902	150996753	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002707_151006311
transcript_95220.known	chr3	+	1037	5	FSM	ENSG00000144597.14	ENST00000449565.1	1037	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	37.2860563750043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAACAATCTCATCTT	5	True	NA	NA	False	NA	NA	NA	15427597	15439340	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15427883_15429912_15430008_15434347_15434539_15436341_15436576_15439108
transcript_95221.known	chr3	-	1221	5	FSM	ENSG00000206562.12	ENST00000450816.6	1221	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	85.3503807841535	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCTGAGGCAAGAGAA	3	True	NA	NA	False	NA	NA	NA	15427540	15411017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15426286_15426636_15427401
transcript_95233.known	chr3	-	618	5	FSM	ENSG00000206562.12	ENST00000489881.5	618	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	71.4995629357271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTCAGAGCAAATTTCTA	3713	False	NA	-8	True	AATAAA	-29	NA	15425065	15411329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15411438_15414020_15414163_15415497_15415584_15415771_15415943_15424954
transcript_95234.known	chr3	-	615	4	FSM	ENSG00000206562.12	ENST00000453819.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	68.2853490061293	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	3743	False	NA	-37	True	AATAAA	-18	NA	15425035	15413668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954
transcript_95236.known	chr3	+	2264	5	FSM	ENSG00000169814.16	ENST00000303498.10	2264	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	30.4004522992669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACATCTTCCTCTAACA	10	False	NA	-59	True	NA	NA	NA	15601735	15645729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601895_15632590_15632867_15635423_15635689_15641907_15642058_15644315
transcript_95238.known	chr3	+	2083	4	FSM	ENSG00000169814.16	ENST00000449107.7	2083	4	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	16.2138486760204	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGGAGCCCACTTCT	NA	False	NA	NA	False	NA	NA	NA	15601369	15645582	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601771_15635423_15635689_15641907_15642058_15644315
transcript_95241.known	chr3	+	2069	4	FSM	ENSG00000169814.16	ENST00000672065.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	28.2174099134244	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTGGCTTGGGGTTT	-30	True	NA	31	True	AATAAA	-27	NA	15601744	15645819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601895_15635423_15635689_15641907_15642058_15644315
transcript_95243.known	chr3	+	1112	4	FSM	ENSG00000169814.16	ENST00000436193.5	1112	4	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	25.5255862921022	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAACCAGCTCCCACTC	194	False	NA	NA	False	NA	NA	NA	15601968	15644670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15602311_15635423_15635689_15641907_15642058_15644315
transcript_95244.nic	chr3	+	1002	3	ISM	ENSG00000169814.16	ENST00000449107.7	2083	4	-3	3342	-3	0	5prime_fragment	FALSE	canonical	1	45	junction_2	14.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTATTCATCTATGGA	NA	False	NA	11	True	ATTAAA	-19	NA	15601366	15642240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_15601771_15635423_15635689_15641907
transcript_95246.known	chr3	+	760	3	FSM	ENSG00000169814.16	ENST00000417015.3	760	3	0	0	0	0	multi-exon	FALSE	canonical	1	45	junction_2	34.5	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGATCTTTCCATTTA	-30	True	NA	23	True	ATTAAA	-31	NA	15601744	15642252	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601895_15635423_15635689_15641907
transcript_95248.known	chr3	+	459	2	FSM	ENSG00000169814.16	ENST00000480711.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATGATTTGAGTTC	-27	True	NA	NA	False	NA	NA	NA	15601747	15606752	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601895_15606440
transcript_95249.known	chr3	+	644	2	FSM	ENSG00000169814.16	ENST00000642517.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTATGCACCGACCCTT	114	False	NA	NA	False	CATAAA	-19	NA	15602137	15606911	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15602311_15606440
transcript_9525.known	chr1	-	2400	10	FSM	ENSG00000143409.17	ENST00000312210.9	2400	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	5.76922443810985	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTCCTGAGATCTGT	1515	False	NA	NA	False	NA	NA	NA	151006857	150996548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002324_151006311
transcript_95250.known	chr3	+	717	3	FSM	ENSG00000169814.16	ENST00000482824.2	717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGTTATTCATCTATGGA	6217	False	NA	11	True	ATTAAA	-19	NA	15630001	15642240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15630121_15635423_15635689_15641907
transcript_95251.known	chr3	-	2009	17	FSM	ENSG00000131373.15	ENST00000321169.10	2009	17	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	14.6733974849044	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAAAAAGTTATTCT	-3	True	NA	NA	False	ATTAAA	-21	NA	15601569	15560698	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_95252.known	chr3	-	1734	14	FSM	ENSG00000131373.15	ENST00000451445.6	1734	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	83.6643052701172	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTACAGTAAAGGAATT	0	True	NA	71	True	AATAAA	-18	NA	15601587	15560745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_95253.known	chr3	-	1880	16	FSM	ENSG00000131373.15	ENST00000456194.6	1880	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	70.9749877695579	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTACAGTAAAGGAAT	-3	True	NA	70	True	AATAAA	-17	NA	15601569	15560746	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
transcript_95254.known	chr3	-	1721	15	FSM	ENSG00000131373.15	ENST00000457447.6	1721	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	108.384802007119	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCACAGCAAAATTACTCT	-3	True	NA	10	True	NA	NA	NA	15601569	15560806	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_95255.known	chr3	-	2214	16	FSM	ENSG00000131373.15	ENST00000628377.2	2214	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_12	77.3980763470399	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTAACAGAAAAAGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	15601852	15560703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_95256.known	chr3	-	861	8	FSM	ENSG00000131373.15	ENST00000421993.5	861	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	98.8272043848788	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCAGATTTTAAATACAAT	-5	False	NA	NA	False	NA	NA	NA	15601592	15579899	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
transcript_95257.known	chr3	-	1178	3	FSM	ENSG00000154813.10	ENST00000285082.8	1178	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	191	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTGTGTTTTGATA	215	False	NA	NA	False	NA	NA	NA	16264777	16259909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16260830_16264154_16264230_16264594
transcript_95259.known	chr3	-	4019	3	FSM	ENSG00000154813.10	ENST00000488423.2	4019	3	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	12	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGCGCCTGGGGAGTTC	11	True	NA	-1	True	AATAAA	-19	NA	16264943	16257060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16260830_16264154_16264230_16264768
transcript_95260.known	chr3	-	3052	2	FSM	ENSG00000154813.10	ENST00000383775.4	3052	2	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	0	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTTATGTAGTTTT	-15	True	NA	-1	True	AATAAA	-40	NA	16264969	16257978	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16260830_16264768
transcript_95263.known	chr3	+	1994	10	FSM	ENSG00000154814.14	ENST00000442255.5	1994	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	56.4074682035615	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATCTTAATAATTT	-8	True	NA	NA	False	AATGAA	-11	NA	16265206	16303983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16272144_16272322_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_95267.known	chr3	+	1643	10	FSM	ENSG00000154814.14	ENST00000435829.6	1643	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	51.9211177569956	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAACTCACTAAGCT	-5	True	NA	NA	False	NA	NA	NA	16265209	16337315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16337111
transcript_9527.known	chr1	+	3025	8	FSM	ENSG00000143363.17	ENST00000271620.8	3025	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	45.1930101151196	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-3	True	NA	13	True	ATTAAA	-16	NA	151008448	151035713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_95276.known	chr3	+	3916	9	FSM	ENSG00000154814.14	ENST00000285083.10	3916	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	9.39331544237709	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGCTCTATGAGTTT	-3	True	NA	3	True	ATTAAA	-16	NA	16265211	16306087	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_9529.nic	chr1	+	2986	8	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	23	junction_2	61.9664161840418	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-2	True	NA	13	True	ATTAAA	-16	NA	151008397	151035713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_95292.nnic	chr3	-	1002	2	NIC	ENSG00000229271.2	novel	1001	2	NA	NA	27141	81	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATATCCTATTAGTTCTG	NA	False	NA	-5	True	AATAAA	-30	NA	16670338	16647671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_16648613_16670277
transcript_95293.nnic	chr3	-	906	2	NIC	ENSG00000229271.2	novel	1001	2	NA	NA	27141	-15	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAACAACATAACTTCT	NA	False	NA	-13	True	AATAAA	-19	NA	16670338	16647767	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_16648613_16670277
transcript_95296.known	chr3	-	411	3	FSM	ENSG00000229271.2	ENST00000426218.1	411	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTGATGAGTTGTT	414	False	NA	NA	False	AATAAA	-24	NA	16697479	16687985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16688212_16692288_16692373_16697378
transcript_9530.nic	chr1	+	2917	7	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_6	68.4657254073566	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-2	True	NA	13	True	ATTAAA	-16	NA	151008397	151035713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_95300.nnic	chr3	+	370	2	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGAAGCGGCCGAGGCGG	NA	False	NA	NA	False	ATTAAA	-14	NA	16884260	16884915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_+_16884537_16884821
transcript_95307.nic	chr3	-	387	3	ISM	ENSG00000131374.14	ENST00000445294.5	623	7	-54	103726	-17	1	5prime_fragment	FALSE	canonical	3	51	junction_1	18	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTTGTATGCCAATAC	69	False	NA	NA	False	NA	NA	NA	17742669	17508472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_17508606_17623848_17623914_17742480
transcript_95308.nic	chr3	-	2395	2	ISM	ENSG00000131374.14	ENST00000446863.5	557	6	-94	215252	-17	2007	5prime_fragment	FALSE	canonical	3	87	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGCGAGAATACTATATC	69	False	NA	NA	False	TTTAAA	-12	NA	17742669	17621707	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_17623914_17742480
transcript_95311.known	chr3	+	465	2	FSM	ENSG00000286352.1	ENST00000665745.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTTGCTATAGTTTA	12	True	NA	NA	False	AATAAA	-22	NA	17742951	17745665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_17743119_17745367
transcript_95316.known	chr3	+	1131	5	FSM	ENSG00000228956.9	ENST00000598149.6	1131	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.39509972887452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCTATTTATTGTTT	235	False	NA	NA	False	AATAAA	-19	NA	18445236	18469714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_18445443_18463479_18463546_18464286_18464340_18465962_18466040_18468985
transcript_95323.nic	chr3	+	1073	4	ISM	ENSG00000228956.9	ENST00000628963.2	888	5	50097	-277	-9711	-80	3prime_fragment	FALSE	canonical	0	0	junction_1	6.59966329107444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTTTTCAGCCATCAC	NA	False	NA	NA	False	AATAAA	-37	NA	18516079	18530647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_18516179_18526386_18526541_18527173_18527327_18529980
transcript_95324.nic	chr3	+	1680	4	ISM	ENSG00000228956.9	ENST00000628963.2	888	5	50097	-884	-9711	527	3prime_fragment	FALSE	canonical	0	0	junction_1	6.59966329107444	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCACGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	18516079	18531254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_18516179_18526386_18526541_18527173_18527327_18529980
transcript_95328.nic	chr3	+	849	4	ISM	ENSG00000183960.9	ENST00000452398.5	5082	16	-115	192047	-91	-52585	5prime_fragment	FALSE	canonical	0	0	junction_1	4.54606056566195	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACAAATTGAAAATAAATA	131	False	NA	NA	False	NA	NA	NA	19148418	19342692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_19148796_19253653_19253888_19281197_19281330_19342586
transcript_95329.known	chr3	+	5077	16	FSM	ENSG00000183960.9	ENST00000328405.7	5077	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.50875691170958	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGACTTCTGATGTTGTA	-34	True	NA	14	True	ATTAAA	-15	NA	19148509	19535642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_19148796_19253653_19253888_19281197_19281330_19342586_19342715_19347724_19347966_19390480_19390639_19395103_19395312_19438163_19438362_19450105_19450306_19451154_19451405_19456767_19456983_19510362_19510402_19512969_19513326_19515321_19515429_19517997_19518075_19533394
transcript_9533.known	chr1	+	2788	7	FSM	ENSG00000143363.17	ENST00000368936.5	2788	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	57.564456626174	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	31	True	NA	13	True	ATTAAA	-16	NA	151008482	151035713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_95332.known	chr3	-	448	2	FSM	ENSG00000163576.18	ENST00000474780.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATAGCTCTGTTGTAAGG	NA	False	NA	NA	False	AATAAA	-28	NA	19947025	19945913	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_19946255_19946918
transcript_95335.nnic	chr3	+	2459	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	292.715115579788	920	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	NA	False	NA	17	True	AATAAA	-17	NA	19947011	19985175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_19947263_19947406_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_95337.nnic	chr3	+	2450	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.715115579788	879	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	NA	False	NA	17	True	AATAAA	-17	NA	19947011	19985175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_19947264_19947416_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_95339.known	chr3	+	1358	7	FSM	ENSG00000144566.11	ENST00000446547.5	1358	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	369.371839147972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGTACAGTAGTCA	-2	True	NA	NA	False	AATATA	-45	NA	19947398	19984147	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_19947522_19950805_19951062_19970547_19970718_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_95343.known	chr3	+	2518	6	FSM	ENSG00000144566.11	ENST00000273047.9	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_4	47.9649872302704	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	-19	True	NA	17	True	AATAAA	-17	NA	19947096	19985175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_9536.known	chr1	+	916	6	FSM	ENSG00000143363.17	ENST00000475722.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	74.3585906267729	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGATCCCTTCAGGAC	15	True	NA	NA	False	AAGAAA	-45	NA	151008466	151033966	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151027232_151027328_151028785_151028945_151033805
transcript_9538.nic	chr1	+	2714	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	81.541645801394	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-2	True	NA	13	True	ATTAAA	-16	NA	151008397	151035713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_95384.known	chr3	-	2338	9	FSM	ENSG00000129810.15	ENST00000263753.8	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	74.0147789296165	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	8	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_95386.known	chr3	-	1582	9	FSM	ENSG00000129810.15	ENST00000419233.6	1582	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	86.1763272308585	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	8	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_95387.known	chr3	-	1531	8	FSM	ENSG00000129810.15	ENST00000306698.6	1531	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	92.3328053227861	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	8	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_95388.known	chr3	-	3070	8	FSM	ENSG00000129810.15	ENST00000412997.6	3070	8	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_7	33.7656992964694	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTTCCTTCTATT	-7	True	NA	-3	True	AATAAA	-15	NA	20186206	20169483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_9539.nic	chr1	+	2688	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	72.7829650399048	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-2	True	NA	13	True	ATTAAA	-16	NA	151008397	151035713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_95390.known	chr3	-	1075	8	FSM	ENSG00000129810.15	ENST00000417364.1	1075	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	67.3264965883206	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTAAGAGTACACAAAC	113	False	NA	NA	False	TTTAAA	-37	NA	20186127	20170643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_95391.known	chr3	-	1187	8	FSM	ENSG00000129810.15	ENST00000437051.5	1187	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	74.2782963329292	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	8	True	NA	-21	True	AATAAA	-33	NA	20186191	20170484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_9540.known	chr1	+	825	6	FSM	ENSG00000143363.17	ENST00000450884.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	68.575797479869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGAAGCTGACCCCTG	25	True	NA	NA	False	NA	NA	NA	151008476	151033837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_95401.known	chr3	-	931	7	FSM	ENSG00000129810.15	ENST00000443724.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.8284706822211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGGGGTGTTGAC	113	False	NA	NA	False	AATAGA	-23	NA	20186127	20161008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20161227_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_95403.known	chr3	-	2266	7	FSM	ENSG00000129810.15	ENST00000442720.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	73.0990576014645	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCCTTCTATTCTT	-7	True	NA	0	True	AATAAA	-18	NA	20186206	20169480	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_9541.nic	chr1	+	2529	5	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_2	76.9654955158479	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	-2	True	NA	13	True	ATTAAA	-16	NA	151008397	151035713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151027232_151027328_151028785_151028945_151033805
transcript_95415.nic	chr3	-	1246	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-133	4073	-118	164	5prime_fragment	FALSE	canonical	3	88	junction_5	57.7636563939645	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACAAATCTGTCAGTTCC	NA	False	NA	NA	False	AATAAA	-35	NA	20186324	20174557	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_9542.known	chr1	+	2238	4	FSM	ENSG00000143363.17	ENST00000368935.1	2238	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	97.8570385818005	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	4	True	NA	13	True	ATTAAA	-16	NA	151008529	151035713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151027232_151027328_151033805
transcript_95420.nic	chr3	-	1243	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-182	4013	-103	65	5prime_fragment	FALSE	canonical	3	150	junction_5	37.841775856849	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAGAAAAGAAAAGCT	NA	False	NA	NA	False	ACTAAA	-32	NA	20186309	20174656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_95421.nic	chr3	-	1147	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-133	4172	-118	65	5prime_fragment	FALSE	canonical	3	88	junction_5	57.7636563939645	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAGAAAAGAAAAGCT	NA	False	NA	NA	False	ACTAAA	-32	NA	20186324	20174656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_95437.known	chr3	-	10478	8	FSM	ENSG00000151789.12	ENST00000281523.8	10478	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	7.86882248795452	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGATGATGCTTGTTC	-1	True	NA	NA	False	ATTAAA	-32	NA	21751210	21412217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_21421448_21423962_21424065_21425491_21425671_21436969_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
transcript_95445.nnic	chr3	-	1371	5	NNC	ENSG00000151789.12	novel	10478	8	NA	NA	0	9534	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5896783120142	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAACTTTGTTTACTTAT	-1	True	NA	NA	False	AATAAA	-21	NA	21751210	21552384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_21553135_21563261_21563313_21564573_21564685_21664885_21665029_21750894
transcript_95447.nic	chr3	-	1239	5	ISM	ENSG00000151789.12	ENST00000281523.8	10478	8	-123	24603	-123	-1	5prime_fragment	FALSE	canonical	3	17	junction_2	5.7227615711298	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAGCAAAGTGTCATTTATA	7640	False	NA	-5	True	AATAAA	-6	NA	21751333	21436820	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_21437204_21510860_21511024_21564573_21564685_21664885_21665029_21750894
transcript_95448.nic	chr3	-	1120	5	NIC	ENSG00000151789.12	novel	651	5	NA	NA	-123	199	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	9.13783344124853	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTTCCACCATCTGGA	7640	False	NA	-24	True	AATAAA	-15	NA	21751333	21561719	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_21562096_21563261_21563313_21564573_21564685_21664885_21665029_21750894
transcript_95449.nic	chr3	-	798	5	NIC	ENSG00000151789.12	novel	651	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_2	9.13783344124853	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGGCATATCTCAGCT	-1	True	NA	NA	False	AATAAA	-35	NA	21751210	21561918	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_21562096_21563261_21563313_21564573_21564685_21664885_21665029_21750894
transcript_9545.known	chr1	-	1174	6	FSM	ENSG00000197622.13	ENST00000492796.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	24.7353997339845	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAAGCTGGCTTT	-14	True	NA	NA	False	NA	NA	NA	151059615	151052945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151056650_151056787_151059478
transcript_95450.nnic	chr3	-	950	4	NIC	ENSG00000151789.12	novel	10478	8	NA	NA	0	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.7679176187089	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACGAGCAAAGTGTCATTT	-1	True	NA	-8	True	AATAAA	-3	NA	21751210	21436823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_21437204_21564573_21564685_21664885_21665029_21750894
transcript_95452.nic	chr3	-	2740	4	ISM	ENSG00000151789.12	ENST00000281523.8	10478	8	-123	96759	-123	1884	5prime_fragment	FALSE	canonical	3	17	junction_1	5.8878405775519	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCCCCCAGGTGTG	7640	False	NA	NA	False	AAAAAG	-13	NA	21751333	21508976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_21511024_21564573_21564685_21664885_21665029_21750894
transcript_95456.known	chr3	+	985	1	FSM	ENSG00000132967.9	ENST00000451497.1	985	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5287	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGGGAACGTAGAAGA	204	False	NA	7	True	ATTAAA	-13	NA	22381944	22382929	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_22381900_22382900
transcript_95460.known	chr3	+	1248	6	FSM	ENSG00000182247.10	ENST00000425792.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	39.3984771279297	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTATGTGATCTTT	NA	False	NA	NA	False	NA	NA	NA	23203019	23590222	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23203263_23208691_23208876_23217261_23217313_23499607_23499741_23532553_23532702_23589733
transcript_95466.known	chr3	+	1783	6	FSM	ENSG00000170142.12	ENST00000306627.8	1783	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	28.0570846668003	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAGTACATGTCCTG	-27	True	NA	NA	False	GATAAA	-24	NA	23805954	23891640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23806089_23807236_23807422_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_95477.known	chr3	+	1398	5	FSM	ENSG00000170142.12	ENST00000346855.7	1398	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	51.5048541401682	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTCATTTACTTT	-17	True	NA	24	True	AATAAA	-27	NA	23805964	23891316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23806089_23807236_23807422_23887566_23887700_23889111_23889260_23890508
transcript_9548.known	chr1	-	3006	5	FSM	ENSG00000197622.13	ENST00000357235.6	3006	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	7.66077672302228	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCACAGTAATCATTG	-21	True	NA	-16	True	AATAAA	-14	NA	151059622	151050984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151059478
transcript_95480.known	chr3	+	1224	5	FSM	ENSG00000170142.12	ENST00000424381.5	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	44.6507278776058	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGTTCATTTACT	-6	True	NA	22	True	AATAAA	-25	NA	23810442	23891314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23810529_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_95485.known	chr3	+	1138	5	FSM	ENSG00000170142.12	ENST00000475680.5	1138	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	50.2742478809977	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATAAGAGATGAGTAGT	346	False	NA	NA	False	TATAAA	-23	NA	23810794	23891089	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23811020_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_95489.known	chr3	-	1605	5	FSM	ENSG00000197885.11	ENST00000412028.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	39.9773373300424	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAGTATCAAAAAT	-9	True	NA	-40	True	NA	NA	NA	23916963	23892306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911447_23916860
transcript_95490.known	chr3	-	1644	5	FSM	ENSG00000197885.11	ENST00000415901.6	1644	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	33.8156768378218	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACAATAAAAGTATCAAA	30	True	NA	-43	True	NA	NA	NA	23916924	23892309	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911451_23916783
transcript_95492.known	chr3	-	2018	5	FSM	ENSG00000197885.11	ENST00000421515.6	2018	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	36.1040163970714	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATACTTTTTTCAT	NA	False	NA	NA	False	ATTAAA	-25	NA	23946591	23892063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23893338_23900807_23901050_23910810_23910922_23911328_23911451_23946322
transcript_95502.known	chr3	+	588	4	FSM	ENSG00000174748.22	ENST00000422218.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10614.8837749433	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGATCCATTCCATAAA	NA	False	NA	NA	False	NA	NA	NA	23916590	23919286	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23916769_23917849_23918032_23918439_23918577_23919195
transcript_95504.known	chr3	+	605	4	FSM	ENSG00000174748.22	ENST00000436146.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	10513.5616546757	7544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	-3	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917174_23917946_23918032_23918439_23918577_23919195
transcript_95507.known	chr3	+	564	4	FSM	ENSG00000174748.22	ENST00000644684.1	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	10394.8034453118	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGGACAGTCATGTCT	-3	True	NA	13	True	AATAAA	-2	NA	23917147	23919537	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917174_23917972_23918032_23918439_23918577_23919195
transcript_95510.known	chr3	+	571	4	FSM	ENSG00000174748.22	ENST00000643707.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	10592.7342394052	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCTATCAGAAGAAAT	123	False	NA	NA	False	NA	NA	NA	23917298	23919301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917445_23917849_23918032_23918439_23918577_23919195
transcript_9552.known	chr1	-	2379	4	FSM	ENSG00000197622.13	ENST00000483763.5	2379	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	8.65383665716478	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGATATTTTTCTC	27	True	NA	NA	False	NA	NA	NA	151059574	151052113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055994_151059478
transcript_95526.known	chr3	-	778	2	FSM	ENSG00000223791.1	ENST00000426702.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACAGTAGGTGAATTTT	283	False	NA	NA	False	AATAAA	-23	NA	23806905	23804023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23804715_23806818
transcript_95527.known	chr3	+	786	2	FSM	ENSG00000170142.12	ENST00000484048.1	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTCATATTAGCAGGTA	-27	True	NA	NA	False	AATAGA	-30	NA	23805954	23807888	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23806089_23807236
transcript_95530.known	chr3	+	824	4	FSM	ENSG00000174748.22	ENST00000644185.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	1105	junction_1	10094.1415792638	20707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	-3	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917296_23917849_23918032_23918439_23918577_23919195
transcript_95531.known	chr3	+	1785	2	FSM	ENSG00000174748.22	ENST00000490223.1	1785	2	0	0	0	0	multi-exon	FALSE	canonical	3	22197	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	-3	True	NA	27	True	AATAAA	-16	NA	23917147	23919551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23918577_23919195
transcript_95532.known	chr3	+	820	3	FSM	ENSG00000174748.22	ENST00000354811.5	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	22197	junction_2	314	10557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	-17	True	NA	27	True	AATAAA	-16	NA	23917704	23919551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23918032_23918439_23918577_23919195
transcript_95533.known	chr3	+	1729	2	FSM	ENSG00000174748.22	ENST00000465786.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	11634	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	-3	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917174_23917849
transcript_95534.known	chr3	-	795	4	FSM	ENSG00000197885.11	ENST00000416026.2	795	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.4783876475414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGATTGCCTTTAAGTG	2	True	NA	NA	False	ACTAAA	-30	NA	23916952	23893064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23893338_23900807_23901050_23910810_23910922_23916783
transcript_95535.known	chr3	-	7576	11	FSM	ENSG00000151090.20	ENST00000646209.2	7576	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	7.48398289682706	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGATCGCATTCTTCC	4	True	NA	NA	False	AATAAA	-16	NA	24494850	24117152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_24123126_24127498_24127758_24133315_24133463_24143500_24143707_24146674_24146823_24152389_24152491_24190073_24190335_24228937_24229002_24297225_24297372_24337299_24337372_24494651
transcript_95536.known	chr3	-	7402	10	FSM	ENSG00000151090.20	ENST00000396671.7	7402	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.33333333333333	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGATCGCATTCTTCC	-23	True	NA	NA	False	AATAAA	-16	NA	24494822	24117152	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_24123126_24127498_24127758_24133315_24133463_24143500_24143707_24146674_24146823_24152389_24152491_24190073_24190335_24228937_24229002_24337299_24337372_24494651
transcript_95545.known	chr3	-	539	5	FSM	ENSG00000151090.20	ENST00000428492.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	10.5445483544816	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCTGGACCATGATGATG	28	True	NA	NA	False	NA	NA	NA	24494771	24190153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_24190335_24228937_24229002_24318357_24318495_24337299_24337372_24494686
transcript_95549.nic	chr3	-	779	2	ISM	ENSG00000151090.20	ENST00000428492.5	539	5	-45	146569	-5	-107763	5prime_fragment	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGAGAATTAGATAACCC	-17	True	NA	NA	False	NA	NA	NA	24494816	24336722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_24337372_24494686
transcript_95551.known	chr3	+	1216	2	FSM	ENSG00000228791.8	ENST00000432368.2	1216	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGTTGCCTTATGTAGC	NA	False	NA	NA	False	ATTAAA	-25	NA	24494086	24500342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_24494492_24499531
transcript_95552.known	chr3	+	3132	8	FSM	ENSG00000077092.20	ENST00000330688.9	3132	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.66651877999928	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGGGAGCTTTTACT	5	True	NA	6	True	AATAAA	-17	NA	25428262	25597932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25428889_25461192_25461342_25501181_25501324_25569757_25569919_25580545_25580723_25593502_25593708_25594519_25594679_25596419
transcript_95554.known	chr3	+	2775	8	FSM	ENSG00000077092.20	ENST00000437042.7	2600	8	0	-175	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.988333331307	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTGGGAGCTTTTACT	5	True	NA	6	True	AATAAA	-17	NA	25428262	25597932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25428532_25461192_25461342_25501181_25501324_25569757_25569919_25580545_25580723_25593502_25593708_25594519_25594679_25596419
transcript_95555.known	chr3	+	1235	7	FSM	ENSG00000077092.20	ENST00000479097.6	2352	7	0	1117	0	-174	multi-exon	FALSE	canonical	0	0	junction_3	14.229273425661	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCAGTTCCAGGATTTA	15	True	NA	NA	False	NA	NA	NA	25428715	25596649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25428889_25461192_25461342_25501181_25501324_25580545_25580723_25593502_25593708_25594519_25594679_25596419
transcript_95557.known	chr3	-	5814	36	FSM	ENSG00000077097.16	ENST00000264331.9	5814	36	0	0	0	0	multi-exon	TRUE	canonical	3	220	junction_35	176.726090378326	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGTCTCTTTACTGAA	8	True	NA	-3	True	ATTAAA	-13	NA	25664907	25597983	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_25598478_25599434_25599530_25601099_25601226_25604759_25604871_25606042_25606123_25607170_25607376_25609182_25609345_25609567_25609713_25612514_25612710_25615204_25615289_25615430_25615587_25618417_25618510_25618653_25618850_25619861_25620063_25620681_25620817_25623514_25623747_25624296_25624446_25624681_25624804_25626559_25626675_25626771_25626865_25627186_25627297_25628846_25628953_25629034_25629146_25630028_25630155_25630311_25630470_25630800_25630940_25632445_25632584_25632692_25632795_25633840_25634015_25635935_25636149_25637214_25637313_25638164_25638311_25642321_25642386_25643693_25643785_25645299_25645471_25664228
transcript_95558.known	chr3	-	2534	12	FSM	ENSG00000151092.18	ENST00000280700.10	2534	12	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	26.8940375585063	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTAGTGGTTATTT	-1	True	NA	-1	True	AATAAA	-19	NA	25783443	25718943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_95559.known	chr3	-	2086	12	FSM	ENSG00000151092.18	ENST00000308710.9	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	100.85854589965	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTTCCATATGTGAC	6628	False	NA	-23	True	AATAAA	-14	NA	25783381	25719275	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25736401_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_95562.known	chr3	-	2024	11	FSM	ENSG00000151092.18	ENST00000396649.7	2024	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	79.6972396008795	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATATGTGACTATAA	4	True	NA	-18	True	AATAAA	-19	NA	25783438	25719270	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_25719636_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_9557.known	chr1	+	2085	2	FSM	ENSG00000143443.10	ENST00000368926.6	2085	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCAGTCACTGTTCTG	19	True	NA	NA	False	AATACA	-38	NA	151047750	151051420	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151048853_151050437
transcript_95570.known	chr3	+	1044	4	FSM	ENSG00000151093.8	ENST00000448177.1	1044	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	13.3666251038423	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGCTATATGTGAAG	-4	True	NA	NA	False	ATTAAA	-9	NA	25790089	25794523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25790148_25790989_25791316_25791769_25791998_25794091
transcript_95574.known	chr3	+	1506	3	FSM	ENSG00000151093.8	ENST00000280701.8	1506	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATGTGAAGAAATTATG	-4	True	NA	NA	False	ATTAAA	-17	NA	25790089	25794531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25790148_25790989_25791998_25794091
transcript_95575.nic	chr3	+	2147	3	NIC	ENSG00000151093.8	novel	1506	3	NA	NA	24	0	intron_retention	FALSE	canonical	0	0	junction_1	16	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATGTGAAGAAATTATG	24	False	NA	NA	False	ATTAAA	-17	NA	25790117	25794531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_25790817_25790989_25791998_25794091
transcript_95576.nnic	chr3	+	1142	2	NIC	ENSG00000151093.8	novel	756	2	NA	NA	19	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTATATGTGAAGAAATTA	19	False	NA	NA	False	ATTAAA	-15	NA	25790112	25794529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_25790817_25794091
transcript_95577.known	chr3	+	409	1	FSM	ENSG00000213872.3	ENST00000458542.1	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCATGTGCATGTTTT	NA	False	NA	NA	False	AAGAAA	-9	NA	25749487	25749896	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25749500_25749900
transcript_95578.known	chr3	-	3058	11	FSM	ENSG00000151092.18	ENST00000493324.5	3058	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	79.297919266523	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATATGTGACTATAAT	-9	True	NA	-17	True	AATAAA	-20	NA	25783414	25719269	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_9558.known	chr1	+	323	2	FSM	ENSG00000143443.10	ENST00000473308.1	323	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTAACAAGATCTCGCTAT	832	False	NA	NA	False	NA	NA	NA	151048662	151049713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151048853_151049580
transcript_95580.known	chr3	+	1695	3	FSM	ENSG00000179796.12	ENST00000417744.5	1695	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGACTTATTGGTCAA	21	False	NA	14	True	AATAAA	-25	NA	26624666	26710776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_26624770_26625183_26625512_26709512
transcript_95581.known	chr3	+	1696	2	FSM	ENSG00000179796.12	ENST00000396641.6	1696	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGACTTATTGGTCAA	-14	True	NA	14	True	AATAAA	-25	NA	26622805	26710776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_26623238_26709512
transcript_95582.known	chr3	+	927	2	FSM	ENSG00000179796.12	ENST00000432040.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGACAGCCCACAACGT	1261	False	NA	NA	False	NA	NA	NA	26624080	26710161	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_26624359_26709512
transcript_95583.known	chr3	+	905	2	FSM	ENSG00000179796.12	ENST00000469437.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCAATAGTGTGGACAG	32	False	NA	NA	False	AATGAA	-44	NA	26624677	26709583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_26625512_26709512
transcript_95586.nnic	chr3	+	735	2	Genic_Genomic	ENSG00000272282.1	novel	1096	1	NA	NA	-733	-1	multi-exon	FALSE	canonical	2	3	junction_1	0	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCAGGTCCTCTTTGCAC	NA	False	NA	7	True	NA	NA	NA	27712176	27714004	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_27712322_27713414
transcript_95587.nnic	chr3	+	1389	2	Genic_Genomic	ENSG00000272282.1	novel	1096	1	NA	NA	-996	390	multi-exon	FALSE	canonical	2	3	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGTACCAGGTTCTTTT	NA	False	NA	16	True	ATTAAA	-18	NA	27711913	27714395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_27712322_27713414
transcript_95591.known	chr3	-	3386	6	FSM	ENSG00000163508.13	ENST00000295743.8	3386	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	102.009019209088	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGCTCTGTCTTCTGTGC	210	False	NA	-12	True	AATAAA	-23	NA	27722498	27715948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_27717752_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
transcript_95593.known	chr3	-	3264	6	FSM	ENSG00000163508.13	ENST00000449599.4	3264	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_4	25.350345165303	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATAGCTCTGTCTTCT	0	True	NA	-16	True	AATAAA	-19	NA	27722323	27715952	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
transcript_95594.known	chr3	-	2080	6	FSM	ENSG00000163508.13	ENST00000461503.2	2080	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	110.107947033809	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGCCATGTTTGCCCTA	-3	True	NA	-107	True	NA	NA	NA	27722711	27716508	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27722429
transcript_9560.known	chr1	+	8807	9	FSM	ENSG00000143458.12	ENST00000368918.8	8807	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.04633819296811	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCAGGGTGTCATTGA	0	True	NA	20	True	AATAAA	-30	NA	151070760	151125542	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151070935_151088189_151088298_151090405_151090574_151093191_151093387_151097851_151098003_151103561_151103676_151107036_151107223_151117391_151117517_151117956
transcript_95605.nic	chr3	+	603	4	NIC	ENSG00000225548.7	novel	332	3	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	30.408332191468	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTAAGTTTTGTGGTG	NA	False	NA	14	True	AATAAA	-15	NA	27821518	27860320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_27821725_27824649_27824749_27848700_27848765_27860086
transcript_95614.known	chr3	+	332	3	FSM	ENSG00000225548.7	ENST00000455984.1	332	3	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_2	2	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCCTGGATTCAAGTCA	NA	False	NA	NA	False	NA	NA	NA	27821597	27860192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_27821725_27824649_27824749_27860086
transcript_95615.known	chr3	+	543	3	FSM	ENSG00000225548.7	ENST00000414382.5	543	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	31	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAATATTTTTATTTTTAT	NA	False	NA	NA	False	AGTAAA	-18	NA	27821487	27891301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_27821725_27824649_27824749_27891094
transcript_95638.nnic	chr3	-	897	2	NNC	ENSG00000235493.2	novel	781	3	NA	NA	-444	-59904	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTGTTGTGTTAATG	NA	False	NA	NA	False	AATAAA	-30	NA	28059712	28057447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_28057874_28059241
transcript_95674.known	chr3	+	670	5	FSM	ENSG00000187118.14	ENST00000418849.2	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	321.121083082379	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	-4	True	NA	15	True	AATAAA	-15	NA	28241623	28319773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241813_28253730_28253766_28263290_28263381_28316332_28316424_28319508
transcript_95679.known	chr3	+	6009	4	FSM	ENSG00000187118.14	ENST00000466830.6	6009	4	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_2	112.018847620489	2285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGCCAAAAAAAAAAAGTTT	-9	True	NA	NA	False	AGTAAA	-15	NA	28241618	28325142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241813_28263290_28263381_28316332_28316424_28319508
transcript_95687.known	chr3	+	724	4	FSM	ENSG00000187118.14	ENST00000334841.10	724	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	315.224082554335	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	-4	True	NA	15	True	AATAAA	-15	NA	28241623	28319773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241902_28263290_28263381_28316332_28316424_28319508
transcript_95692.known	chr3	+	549	3	FSM	ENSG00000187118.14	ENST00000423894.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	269	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGGTTTCTTAAATG	-10	True	NA	13	True	AATAAA	-13	NA	28241617	28319771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241813_28316332_28316424_28319508
transcript_95694.known	chr3	+	3749	3	FSM	ENSG00000187118.14	ENST00000477739.1	3749	3	0	0	0	0	multi-exon	FALSE	canonical	3	540	junction_2	4.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCAAAGTTTTGGTT	-44	True	NA	4	True	AATAAA	-4	NA	28241583	28319762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241813_28263290_28263381_28316332
transcript_95695.known	chr3	+	446	3	FSM	ENSG00000187118.14	ENST00000482499.1	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	4	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTTCTTAAATGGGAAA	NA	False	NA	18	True	AATAAA	-18	NA	28316352	28319776	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28316424_28316752_28316860_28319508
transcript_95696.known	chr3	-	1485	7	FSM	ENSG00000163512.14	ENST00000463512.5	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	32.1735743878247	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCAAAAGCAAATTTTC	21	True	NA	NA	False	NA	NA	NA	28348972	28326489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_95697.known	chr3	-	1366	7	FSM	ENSG00000163512.14	ENST00000420543.6	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	53.5892298466358	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTGTTTTATCATTT	53	False	28349071	-16	True	AATAAA	-14	NA	28349050	28331690	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28331955_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_95698.known	chr3	-	943	7	FSM	ENSG00000163512.14	ENST00000334100.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	51.4114665117509	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTTTATCATTTGG	474	False	NA	-14	True	AATAAA	-16	NA	28348629	28331688	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28331951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_95699.known	chr3	-	3127	9	FSM	ENSG00000163512.14	ENST00000295748.7	3127	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	73.7774313391297	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTGAAATATTGTCCT	2	True	NA	3	True	AATAAA	-22	NA	28348790	28322352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340602_28341511_28341597_28348600
transcript_95704.known	chr3	+	448	3	FSM	ENSG00000144642.22	ENST00000445077.1	448	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCTTTTTTTTTTTTC	34	False	NA	NA	False	NA	NA	NA	28576427	28757595	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28576497_28757108_28757242_28757349
transcript_95706.nnic	chr3	-	1061	3	Antisense	novelGene_ENSG00000144642.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTATTAACTAAATTACC	407	False	NA	NA	False	AATAAA	-27	NA	28575570	28556948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_28557739_28573959_28574013_28575352
transcript_95712.known	chr3	-	738	2	FSM	ENSG00000235904.3	ENST00000635847.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTATCACATTTTTT	-8	False	NA	NA	False	AATAAA	-22	NA	29280904	29264193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_29264758_29280730
transcript_9572.known	chr1	+	869	7	FSM	ENSG00000163156.12	ENST00000368902.1	869	7	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_1	175.517963626392	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	-28	True	NA	15	True	AATAAA	-25	NA	151166078	151169138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151166253_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_95724.known	chr3	-	758	5	FSM	ENSG00000144645.15	ENST00000466604.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	100.641380654282	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGAGGGAGATGTGTG	27	False	NA	-7	True	AATAAA	-18	NA	31960336	31822127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_31822244_31830039_31830232_31876432_31876513_31879654_31879831_31960142
transcript_95730.known	chr3	+	3217	2	FSM	ENSG00000197385.6	ENST00000360311.5	3217	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATAACTAATACAGATGC	-11	True	NA	102	True	AATACA	-31	NA	31981749	31991723	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_31981903_31988659
transcript_95731.known	chr3	+	3947	8	FSM	ENSG00000152642.11	ENST00000282541.10	3947	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	8.95795166090908	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCACCGTGGATCCTGTT	-39	True	NA	8	True	AATAAA	-17	NA	32106619	32168709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32106759_32128075_32128254_32138586_32138728_32140227_32140367_32146621_32146735_32158875_32159110_32159567_32159675_32165813
transcript_95733.known	chr3	-	1891	1	FSM	ENSG00000261572.1	ENST00000565519.1	1891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTGGCTTAAAATCACCA	-1	True	NA	1	True	AATAAA	-14	NA	32238578	32236687	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32236700_32238600
transcript_95734.known	chr3	+	1169	4	FSM	ENSG00000170293.9	ENST00000307526.4	1169	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	8.2192186706253	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTGTGTTTGATTGG	-27	True	NA	31	True	ATTAAA	-17	NA	32238679	32370321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32239120_32357372_32357547_32367871_32367989_32369883
transcript_95736.known	chr3	+	1856	5	FSM	ENSG00000153551.14	ENST00000334983.10	1856	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	66.027929696455	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGCACCCGTGGTGT	-1	True	NA	NA	False	NA	NA	NA	32391852	32455528	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452391_32452474_32454240
transcript_95739.known	chr3	+	1214	4	FSM	ENSG00000153551.14	ENST00000349718.8	1214	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	134.650164005346	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCCAGTTGCACAAGGA	4	True	NA	7	True	AATAAA	-8	NA	32391697	32454830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32392066_32441839_32442014_32452391_32452474_32454240
transcript_95741.known	chr3	+	780	3	FSM	ENSG00000153551.14	ENST00000465248.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	177.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATTGACTCGGCCAG	146	False	NA	-4	True	NA	NA	NA	32392038	32454819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32392066_32441839_32442014_32454240
transcript_95742.known	chr3	+	2066	2	FSM	ENSG00000153551.14	ENST00000464689.1	2066	2	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTGCACAAGGATTTCT	NA	False	NA	12	True	AATAAA	-13	NA	32451002	32454835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32452474_32454240
transcript_95743.known	chr3	-	3307	4	FSM	ENSG00000091317.8	ENST00000205636.4	3307	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_1	37.4195433192633	1556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTTGTAAGTGTTTA	-32	True	NA	-11	True	AATAAA	-20	NA	32502852	32481311	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32484098_32487937_32488037_32491709_32491887_32502607
transcript_95744.known	chr3	+	371	1	FSM	ENSG00000213849.3	ENST00000449702.1	371	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGATGGTCAAATACAT	5172	False	NA	NA	False	NA	NA	NA	32507954	32508325	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32508000_32508300
transcript_95745.known	chr3	-	2485	13	FSM	ENSG00000144635.9	ENST00000273130.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_5	36.8083437099072	681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTTGCATTCTCTTA	33	False	32570891	-3	True	AATAAA	-29	NA	32570858	32525973	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
transcript_95749.nnic	chr3	+	452	3	NNC	ENSG00000182973.20	novel	354	2	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	211.5	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	NA	False	NA	13	True	AATAAA	-20	NA	32769106	32773714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_32769225_32769886_32769963_32773456
transcript_95750.nnic	chr3	+	613	3	NNC	ENSG00000182973.20	novel	354	2	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	211.5	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	NA	False	NA	17	True	ATTAAA	-18	NA	32769106	32773875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_32769225_32769886_32769963_32773456
transcript_95753.nnic	chr3	+	620	2	NNC	ENSG00000182973.20	novel	551	5	NA	NA	14	-22706	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTGTCTCTCTACAGT	-5	True	NA	NA	False	AGTAAA	-25	NA	32685158	32686069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_32685483_32685773
transcript_95754.known	chr3	+	992	1	FSM	ENSG00000213842.2	ENST00000379452.3	992	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTAATTTGCTCTCAC	83	False	NA	NA	False	AAAAAG	-7	NA	32752909	32753901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32752900_32753900
transcript_95755.known	chr3	+	2815	19	FSM	ENSG00000182973.20	ENST00000328834.10	2772	19	-43	0	0	0	multi-exon	FALSE	canonical	3	272	junction_12	36.650206743223	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	7	True	NA	17	True	ATTAAA	-18	NA	32685144	32773875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_95756.known	chr3	+	2573	18	FSM	ENSG00000182973.20	ENST00000331889.10	2573	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	84.4280984402016	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	7	True	NA	13	True	AATAAA	-20	NA	32685144	32773714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_95761.known	chr3	-	2512	16	FSM	ENSG00000170266.16	ENST00000399402.7	2512	16	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_15	120.161446950897	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGTTTGATCTGTGG	307	False	NA	-4	True	AATAAA	-38	NA	33096835	32996608	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
transcript_95777.known	chr3	-	2523	16	FSM	ENSG00000170266.16	ENST00000307363.10	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	501	junction_6	34.6657692191527	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAATAGTCTTGGTTTG	-4	True	NA	-12	True	AATAAA	-30	NA	33097146	32996616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
transcript_95778.known	chr3	-	2018	13	FSM	ENSG00000170266.16	ENST00000307377.12	2018	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	200.672342112432	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACTGTTTTTAAT	-4	True	NA	-14	True	AATAAA	-16	NA	33097146	32996728	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33065462_33065558_33072543_33072714_33097010
transcript_95779.known	chr3	+	6595	7	FSM	ENSG00000170275.15	ENST00000320954.11	6595	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	340.724554768544	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATTTTCTATTCTAT	-4	True	NA	9	True	ATTAAA	-17	NA	33114013	33147773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33129938_33130068_33132554_33132701_33134181_33134266_33142394
transcript_95781.known	chr3	-	4602	5	FSM	ENSG00000173705.9	ENST00000309558.8	4602	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	3.63145976158349	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGCTGAATGTATTTTA	12	True	NA	-5	True	AATAAA	-16	NA	33218810	33150042	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_33154034_33174885_33175075_33207807_33207927_33213927_33214106_33218685
transcript_95784.known	chr3	+	3827	15	FSM	ENSG00000153558.16	ENST00000484457.6	3827	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	4.59369576880386	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGTTTGCTTCCTTTTAA	-21	True	NA	NA	False	AAAAAG	-5	NA	33277441	33388092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_33277516_33297663_33297726_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373259_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
transcript_95786.nic	chr3	+	1160	2	ISM	ENSG00000153558.16	ENST00000425973.5	511	7	-55	74595	-25	-60634	intron_retention	FALSE	canonical	3	35	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTAGATGTTGTTA	NA	False	NA	NA	False	AAAAAG	-6	NA	33277416	33298724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_33277516_33297663
transcript_95787.nnic	chr3	-	340	2	FSM	ENSG00000289460.1	ENST00000691602.1	363	2	20	3	20	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACAGTCCTGTGGTATT	-16	True	NA	NA	False	AATAAA	-18	NA	33277356	33275249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_33275401_33277167
transcript_95791.known	chr3	+	5884	18	FSM	ENSG00000170248.15	ENST00000307296.8	5884	18	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_10	47.7367347830878	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTGGAGTATGAATTC	8	True	NA	14	True	AATAAA	-17	NA	33798629	33869703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
transcript_95796.nic	chr3	+	1302	6	ISM	ENSG00000170248.15	ENST00000648706.1	6049	19	-4	42673	0	130	5prime_fragment	FALSE	canonical	3	455	junction_5	25.7604347789396	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAAACTTAACAAA	-51	True	NA	NA	False	CATAAA	-8	NA	33798570	33827007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479
transcript_95798.known	chr3	+	3067	11	FSM	ENSG00000144681.11	ENST00000273183.8	3067	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	6.96060342211794	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTCCTGATCTCTTCT	-8	True	NA	27	True	AATAAA	-34	NA	36380503	36548007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36380755_36443363_36443641_36482991_36483093_36484976_36485059_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
transcript_95799.known	chr3	+	1366	9	FSM	ENSG00000144681.11	ENST00000457375.6	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	14.6628782986152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGACGAGGCTGAGAG	-9	True	NA	NA	False	AAAACA	-36	NA	36380502	36546488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36380755_36443363_36443641_36486133_36486250_36493150_36493230_36504392_36504458_36505745_36505835_36528695_36528748_36528847_36528986_36546190
transcript_95801.nnic	chr3	+	1069	3	NNC	ENSG00000144681.11	novel	476	3	NA	NA	-39	-4572	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	25	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTATTTTACTATTAAT	92	False	NA	20	True	AATACA	-19	NA	36380463	36454769	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_36380755_36443363_36443641_36454268
transcript_95802.known	chr3	-	10611	24	FSM	ENSG00000168016.15	ENST00000645898.2	10611	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	6.49734568459918	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGCCGTTTTATTTCC	31	True	NA	-1	True	TATAAA	-19	NA	36945054	36826818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_36828376_36829563_36829663_36830872_36833920_36834761_36834908_36838371_36838505_36838612_36838717_36842621_36842711_36846247_36846405_36847199_36847347_36851718_36851857_36852145_36852346_36855172_36858050_36858717_36858895_36860905_36861161_36864318_36864481_36874125_36874297_36889828_36889961_36892201_36892341_36892900_36892985_36895639_36895759_36899108_36899260_36903148_36903276_36908322_36908455_36944786
transcript_95807.known	chr3	-	513	2	FSM	ENSG00000178567.8	ENST00000624586.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTAAAGTAAACACTTTG	1396	False	NA	NA	False	TTTAAA	-7	NA	36992268	36990310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_36990436_36991880
transcript_95808.nic	chr3	-	1736	2	ISM	ENSG00000178567.8	ENST00000623924.1	543	3	-231	2184	-40	1317	5prime_fragment	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAAG	-3	True	NA	NA	False	NA	NA	NA	36993171	36988993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_36990436_36992877
transcript_95813.known	chr3	+	2494	19	FSM	ENSG00000076242.16	ENST00000231790.8	2494	19	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_11	29.8331264217944	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	5	True	NA	31	True	AATAAA	-20	NA	36993517	37050846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_95816.known	chr3	+	2428	19	FSM	ENSG00000076242.16	ENST00000435176.5	2428	19	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	91.8611405100245	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTATTTAATTTTAT	-16	True	NA	29	True	AATAAA	-18	NA	36993803	37050844	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993891_36996618_36996710_37000954_37001049_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_95818.known	chr3	+	2205	18	FSM	ENSG00000076242.16	ENST00000673673.1	2205	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_15	71.2067995664618	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACAGTGGATTGATTA	82	False	NA	-16	True	NA	NA	NA	36993594	37050799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37048516_37048610_37048903_37049018_37050485
transcript_95826.known	chr3	+	2183	17	FSM	ENSG00000076242.16	ENST00000413212.2	2183	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	98.3773824362084	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGATGTGTCTTAACA	1	True	NA	8	True	TATAAA	-1	NA	36993784	37050823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993891_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_95827.known	chr3	+	1978	16	FSM	ENSG00000076242.16	ENST00000673715.1	1978	16	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_11	18.4306507993855	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGGCTCATGGCTGTA	10	True	NA	13	True	AATAAA	-14	NA	36993522	37047740	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518
transcript_9583.known	chr1	+	1158	2	FSM	ENSG00000163154.6	ENST00000368910.4	1158	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGGCTCAATGTTTAAT	8	True	NA	NA	False	AATAAA	-15	NA	151156648	151159749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151156723_151158665
transcript_9584.known	chr1	+	862	5	FSM	ENSG00000163156.12	ENST00000497147.1	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_3	52.0210294015795	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACAATGGGTGCTGAG	-5	True	NA	-12	True	NA	NA	NA	151166668	151169111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_95845.known	chr3	+	2403	18	FSM	ENSG00000076242.16	ENST00000674111.1	2403	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	73.5927727006642	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATACACAGTGGATTGA	-18	True	NA	-19	True	NA	NA	NA	36993494	37050796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_95846.known	chr3	-	2821	14	FSM	ENSG00000093167.18	ENST00000354379.8	2821	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	22.0542633643561	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAATAAAATCTCTAATAT	195	False	NA	-30	True	AATAAA	-28	NA	37176360	37052655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_37053962_37054410_37054516_37055085_37055166_37058789_37058911_37063741_37063792_37065809_37065943_37075023_37075117_37083635_37083807_37094791_37094909_37096615_37096661_37129062_37129150_37148893_37149039_37174538_37174606_37176059
transcript_95849.nic	chr3	+	3260	15	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	-31	41995	-26	-209	5prime_fragment	FALSE	canonical	3	86	junction_2	20.6868044306273	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGGAAAAAGTTAAGCAGA	-27	True	NA	NA	False	AAGAAA	-5	NA	37243220	37324750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587
transcript_9585.known	chr1	-	913	6	FSM	ENSG00000163159.15	ENST00000496809.5	913	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	331.710114407143	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCCTGGGCCCCGGCCC	23	True	NA	-106	True	NA	NA	NA	151190145	151176730	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190123
transcript_95850.nic	chr3	+	3469	15	ISM	ENSG00000144674.17	ENST00000356847.8	7673	23	-31	41786	-26	0	5prime_fragment	FALSE	canonical	3	86	junction_2	20.6868044306273	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAACAAATAGAAAGT	-27	True	NA	NA	False	NA	NA	NA	37243220	37324959	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587
transcript_95853.known	chr3	+	7772	24	FSM	ENSG00000144674.17	ENST00000361924.7	7806	24	-94	128	-14	1	multi-exon	TRUE	canonical	3	23	junction_2	66.4346687911613	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTATTGTACTTGTTC	9326	False	NA	12	True	AATAAA	-20	NA	37243176	37366751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_37243623_37251394_37251485_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
transcript_95860.known	chr3	+	6947	21	FSM	ENSG00000144674.17	ENST00000437131.1	6947	21	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_20	68.8623808766441	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTATTGTACTTGTT	66	False	NA	11	True	AATAAA	-19	NA	37282182	37366750	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37366079
transcript_95863.nic	chr3	+	1070	3	ISM	ENSG00000144674.17	ENST00000450863.6	1617	11	-49	41393	-26	-7872	5prime_fragment	FALSE	canonical	3	86	junction_2	19	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGATAATAATAATAATTA	-27	True	NA	NA	False	NA	NA	NA	37243220	37274113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_37243623_37251394_37251485_37273535
transcript_95864.known	chr3	+	1617	11	FSM	ENSG00000144674.17	ENST00000450863.6	1617	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.2867846231904	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAACTATCGAAAAAACA	22	True	NA	NA	False	AAAACA	-44	NA	37243269	37315506	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_37243623_37251394_37251485_37273535_37273602_37281957_37282273_37289234_37289292_37294981_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419
transcript_95867.known	chr3	-	2389	1	FSM	ENSG00000270194.1	ENST00000604992.1	2389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCCCATCCACCTA	10	True	NA	NA	False	AATAAA	-39	NA	37244177	37241788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_37241800_37244200
transcript_95872.known	chr3	-	895	4	FSM	ENSG00000235257.10	ENST00000366441.4	895	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	37861765	37818276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_37818931_37821013_37821101_37834678_37834768_37861700
transcript_95875.nnic	chr3	-	429	4	FSM	ENSG00000235257.10	ENST00000686387.1	410	4	-19	0	5	0	multi-exon	FALSE	canonical	2	3	junction_1	3.55902608401044	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTCAAGCTCTGTT	-30	True	NA	NA	False	AATAAA	-16	NA	37861797	37832764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_37832939_37834678_37834768_37851423_37851493_37861700
transcript_95877.nnic	chr3	-	631	4	NNC	ENSG00000235257.10	novel	1466	5	NA	NA	5	-1426	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.96655480858378	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGACCAAAAGTGTCAC	-30	True	NA	NA	False	AATAAA	-29	NA	37861797	37834190	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_37834567_37834678_37834768_37851423_37851493_37861700
transcript_95879.nnic	chr3	-	360	3	FSM	ENSG00000235257.10	ENST00000684787.1	334	3	-26	0	5	0	multi-exon	FALSE	canonical	2	3	junction_1	4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTCAAGCTCTGTT	-30	True	NA	NA	False	AATAAA	-16	NA	37861797	37832764	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_37832939_37834678_37834768_37861700
transcript_95881.known	chr3	+	4753	8	FSM	ENSG00000144677.15	ENST00000273179.10	4753	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	43.1367072248692	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTGTGGATTGACTAC	-7	True	NA	19	True	AATAAA	-15	NA	37861879	37984469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_37862279_37947056_37947212_37957110_37957144_37964570_37964673_37967825_37967883_37971406_37971500_37975708_37975895_37980741
transcript_95888.known	chr3	-	2963	15	FSM	ENSG00000187091.14	ENST00000463876.5	2963	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	27.5633778031352	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGTGGTCTCTTTAC	4853	False	NA	-7	True	TATAAA	-16	NA	38024787	38007497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38024336
transcript_95889.known	chr3	-	2651	15	FSM	ENSG00000187091.14	ENST00000334661.5	2651	15	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_14	18.3243175110261	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTCTCTTTACCT	-2	True	NA	-5	True	TATAAA	-18	NA	38029642	38007495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38029505
transcript_9589.known	chr1	-	1511	6	FSM	ENSG00000163159.15	ENST00000368892.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	2	620	junction_5	94.5926001334142	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTTGTATTGACCTT	-29	True	NA	-1	True	TATAAA	-24	NA	151190197	151176303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_95899.known	chr3	-	1699	12	FSM	ENSG00000060971.19	ENST00000333167.13	1699	12	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	27.7598913947431	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTAGTGGCTGTGGTTTTT	32	False	38137147	-15	True	AGTAAA	-15	NA	38137127	38122714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_38123123_38125564_38125711_38125825_38125882_38126161_38126342_38126509_38126701_38127785_38127867_38129289_38129389_38131595_38131639_38131925_38132006_38133951_38134010_38136591_38136686_38136864
transcript_959.known	chr1	-	811	4	FSM	ENSG00000162585.17	ENST00000400918.7	811	4	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_1	512.693107250548	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTCCCAGCAGCGCCC	311	False	NA	NA	False	NA	NA	NA	2194751	2185174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2185514_2193638_2193911_2193997_2194134_2194687
transcript_9590.known	chr1	-	1347	6	FSM	ENSG00000163159.15	ENST00000354473.4	1347	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	325.336379767157	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGTGTCCAGTCT	10	True	NA	-15	True	AATAAA	-14	NA	151190158	151176461	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151177065_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_95901.known	chr3	+	6899	37	FSM	ENSG00000008226.20	ENST00000308059.11	6899	37	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.30672661022519	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACATTTTTAAAAGGGGA	-32	True	NA	NA	False	NA	NA	NA	38039207	38124025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38039637_38045542_38045694_38059741_38059853_38062168_38062369_38062580_38062802_38063840_38063920_38084157_38084246_38085273_38085448_38086240_38086378_38088295_38088389_38092789_38092881_38093604_38093768_38094878_38095072_38095887_38095947_38096568_38096738_38097181_38097276_38097506_38097638_38097743_38097903_38100285_38100426_38107583_38107738_38108404_38108516_38109431_38109563_38110098_38110282_38111676_38111748_38112209_38112362_38114341_38114461_38114982_38115054_38116452_38116659_38116772_38116890_38116974_38117101_38117207_38117303_38117526_38117612_38117805_38118025_38120447_38120610_38121627_38121782_38122070_38122195_38122288
transcript_95902.nnic	chr3	-	769	2	Antisense	novelGene_ENSG00000008226.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	NA	False	AATAAA	-16	NA	38080181	38076331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_38076378_38079458
transcript_95904.known	chr3	+	2667	5	FSM	ENSG00000172936.16	ENST00000650905.2	2667	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	9.82344135219425	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	-3	True	NA	8	True	AATAAA	-20	NA	38138660	38143022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140569_38140756_38140849_38141131
transcript_95905.known	chr3	+	2839	4	FSM	ENSG00000172936.16	ENST00000652590.1	2839	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	3.85861230093008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTACCTTGGAAACTTG	-3	True	NA	-8	True	AATAAA	-4	NA	38138660	38143006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140849_38141131
transcript_95906.known	chr3	+	2483	4	FSM	ENSG00000172936.16	ENST00000651800.2	2483	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	73.8301353709235	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	-3	True	NA	5	True	AATAAA	-17	NA	38138660	38143019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38139029_38139863_38139999_38140756_38140849_38141131
transcript_95907.known	chr3	+	2638	4	FSM	ENSG00000172936.16	ENST00000417037.8	2638	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	63.9739530329857	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTGTGTGTGTTGAG	1110	False	NA	5	True	AATAAA	-17	NA	38138551	38143019	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38139029_38140387_38140569_38140756_38140849_38141131
transcript_9591.known	chr1	+	3800	16	FSM	ENSG00000143398.20	ENST00000368888.9	3800	16	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	172.998599865882	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-20	True	NA	36	True	AATAAA	-20	NA	151198551	151249531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151199082_151224244_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_95910.known	chr3	+	3667	19	FSM	ENSG00000093217.11	ENST00000207870.8	3667	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_12	4.92787485811926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACCTTAAACTTTATCT	-29	True	NA	NA	False	AATAAA	-27	NA	38346784	38414985	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936_38363018_38365198_38365286_38365607_38365737_38366807_38366874_38368184_38368258_38370055_38370175_38372654_38372737_38374461_38374503_38375143_38375260_38376116_38376233_38376917_38376992_38379245_38379343_38395504_38395564_38397071_38397160_38400890_38400986_38412935
transcript_95912.known	chr3	+	3484	17	FSM	ENSG00000093217.11	ENST00000424034.5	3484	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.21961363349847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAAGAAAACCTTAA	-6	True	NA	NA	False	AATAAA	-18	NA	38346807	38414976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38346926_38348549_38348633_38365198_38365286_38365607_38365737_38366807_38366874_38368184_38368258_38370055_38370175_38372654_38372737_38374461_38374503_38375143_38375260_38376116_38376233_38376917_38376992_38379245_38379343_38395504_38395564_38397071_38397160_38400890_38400986_38412935
transcript_95913.nic	chr3	+	1008	6	ISM	ENSG00000093217.11	ENST00000649234.1	2106	20	-60	47166	-5	-4158	5prime_fragment	FALSE	canonical	3	13	junction_4	5.23832034148352	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAAAAAATAATAGT	NA	False	NA	NA	False	NA	NA	NA	38346754	38366123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936_38363018_38365198_38365286_38365607
transcript_95914.nic	chr3	+	557	4	ISM	ENSG00000093217.11	ENST00000649234.1	2106	20	-60	50120	-5	6011	5prime_fragment	FALSE	canonical	3	21	junction_3	3.55902608401044	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTGGAGACTGTAT	NA	False	NA	NA	False	AATAAA	-15	NA	38346754	38363169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936
transcript_95916.nnic	chr3	+	396	3	NNC	ENSG00000093217.11	novel	1666	3	NA	NA	-5	-3	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	11	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTAGTTTATGGTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	38346754	38357155	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_38346926_38348549_38348633_38357013
transcript_95917.known	chr3	+	11782	11	FSM	ENSG00000114739.14	ENST00000352511.5	11782	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	4.69148164229596	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTCTTAATTACG	3	True	NA	9	True	AATAAA	-16	NA	38453889	38493142	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38454375_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_95919.nnic	chr3	+	2338	11	NNC	ENSG00000114739.14	novel	5370	10	NA	NA	85	528	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.0004999875006	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAACGGGTGTTGTCCTGA	174	False	NA	NA	False	AAGAAA	-23	NA	38454403	38483902	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_38454685_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_95920.nnic	chr3	+	1733	11	NNC	ENSG00000114739.14	novel	5370	10	NA	NA	162	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.0004999875006	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGGAAAAAAAGTTGT	251	False	NA	-54	True	NA	NA	NA	38454480	38483374	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_38454685_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_95921.known	chr3	-	2517	2	FSM	ENSG00000229589.1	ENST00000441531.1	2517	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCATCTCAGTGATT	1000	False	NA	-1	True	ATTAAA	-18	NA	38454820	38451026	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_38453226_38454502
transcript_95928.known	chr3	+	576	6	FSM	ENSG00000157036.13	ENST00000453767.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	20.6048537971032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACCAGAAGTTCTGATT	-3	True	NA	NA	False	NA	NA	NA	38496480	38523216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38496531_38497628_38497779_38501354_38501495_38503614_38503692_38506853_38506969_38523172
transcript_95929.known	chr3	+	3076	6	FSM	ENSG00000157036.13	ENST00000287675.10	3076	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	15.1973681932103	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATTGTTCTGCTCTTT	-9	True	NA	6	True	GATAAA	-17	NA	38496339	38526303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38496531_38497628_38497779_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_9593.known	chr1	+	3737	15	FSM	ENSG00000143398.20	ENST00000409426.5	3737	15	0	0	0	0	multi-exon	TRUE	canonical	3	149	junction_1	99.6848093968675	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACTTTAATGAGTT	-20	True	NA	9	True	TATAAA	-20	NA	151198551	151249504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_95931.known	chr3	+	1317	5	FSM	ENSG00000157036.13	ENST00000422077.6	1317	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	24.8130510014387	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTTGTCAGTATTATA	-4	True	NA	NA	False	ACTAAA	-29	NA	38496344	38524699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38496531_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_95934.known	chr3	+	580	2	FSM	ENSG00000157036.13	ENST00000489813.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTACAGCAATGAGCACC	-4	True	NA	NA	False	NA	NA	NA	38496344	38498022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38496531_38497628
transcript_95936.known	chr3	+	3965	19	FSM	ENSG00000114742.14	ENST00000302313.10	3965	19	0	0	0	0	multi-exon	TRUE	canonical	3	232	junction_8	38.5652005227255	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	6	True	NA	17	True	AATAAA	-17	NA	39052015	39096664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647
transcript_95939.known	chr3	-	3046	9	FSM	ENSG00000114745.14	ENST00000319283.8	3046	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	23.35560692853	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCGAATTTTCTGGAA	-4	True	NA	1	True	AATACA	-25	NA	39107627	39096598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_95940.known	chr3	+	2426	7	FSM	ENSG00000168026.19	ENST00000479954.5	2426	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAATTCAAGAA	2	True	NA	NA	False	AAAAAG	-14	NA	39107716	39119657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39107865_39109084_39109215_39110028_39110140_39110850_39111018_39112457_39112581_39114584_39114743_39118068
transcript_95944.known	chr3	+	3772	19	FSM	ENSG00000114742.14	ENST00000420940.6	3772	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	97.6865736253794	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAGTACACATTTATTTT	10	True	NA	24	True	AATAAA	-24	NA	39052019	39096671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647_39095415_39095480
transcript_95945.known	chr3	-	2593	5	FSM	ENSG00000144655.15	ENST00000514182.1	2593	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	16.4525833837729	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCTTCTGCCCCACCC	2	True	NA	NA	False	NA	NA	NA	39154562	39142337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154496
transcript_95946.nnic	chr3	-	3158	5	NNC	ENSG00000144655.15	novel	3164	5	NA	NA	-161	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	23.6801604724292	270	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTATGTATTTGT	NA	False	NA	-4	True	AATAAA	-16	NA	39154723	39141854	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_39144045_39144136_39144452_39144996_39145257_39146477_39146723_39154575
transcript_95948.nnic	chr3	+	498	2	NNC	ENSG00000287620.1	novel	1251	2	NA	NA	-26	1929	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGCAGATTTACTCAATCA	1473	False	NA	NA	False	AATAAA	-16	NA	39177734	39181515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_39177929_39181211
transcript_95949.known	chr3	+	1251	2	FSM	ENSG00000287620.1	ENST00000669199.1	1251	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGGAGATGCTACTT	1499	False	NA	NA	False	AATAAA	-19	NA	39177760	39179586	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39177929_39178503
transcript_9596.known	chr1	+	3613	14	FSM	ENSG00000143398.20	ENST00000368890.8	3613	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	142.618579335224	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	-19	True	NA	36	True	AATAAA	-20	NA	151198552	151249531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151199082_151224247_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242437_151242568_151246919_151246966_151247862
transcript_95960.known	chr3	+	2101	7	FSM	ENSG00000144659.13	ENST00000650617.1	2101	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	17.4132771821453	781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTTCAAAAAAGCAGC	-13	True	NA	54	True	NA	NA	NA	39383369	39397351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39383794_39389494_39389617_39390422_39390508_39391440_39391621_39391852_39392022_39394409_39394577_39396397
transcript_95979.known	chr3	+	1032	7	FSM	ENSG00000168028.14	ENST00000443003.2	1032	7	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_3	2058.34486501493	18904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTTCATTTAGT	14	False	NA	2	True	AATAAA	-12	NA	39406734	39412434	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39406765_39407620_39407787_39408605_39408740_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_95980.known	chr3	+	874	6	FSM	ENSG00000168028.14	ENST00000458478.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2107.98998100086	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATGTATCAGGATAGAG	12	False	NA	NA	False	NA	NA	NA	39406732	39412059	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39406765_39407602_39407787_39408605_39408725_39410753_39411000_39411648_39411778_39411895
transcript_95981.known	chr3	+	622	2	FSM	ENSG00000168028.14	ENST00000475346.1	622	2	0	0	0	0	multi-exon	FALSE	canonical	3	3289	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTTAGAGATAAAGCTA	-3	True	NA	NA	False	NA	NA	NA	39406717	39408195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39406765_39407620
transcript_95982.nnic	chr3	+	653	4	NNC	ENSG00000168314.19	novel	561	5	NA	NA	4297	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.05480466765633	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGTGGGGAAAATTCT	3663	False	NA	NA	False	AATAAA	-18	NA	39506511	39524556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_39506744_39513382_39513607_39524242_39524327_39524443
transcript_95987.known	chr3	-	1958	3	FSM	ENSG00000280739.4	ENST00000625390.2	1958	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGGTCCTGTGTTATT	824	False	NA	NA	False	TATAAA	-17	NA	40309542	40173144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_40174723_40301236_40301397_40309322
transcript_95988.known	chr3	-	1983	3	FSM	ENSG00000280739.4	ENST00000663919.1	1983	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGGAGTTGTATTTTT	-6	True	NA	NA	False	NA	NA	NA	40309508	40246829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_40248472_40301236_40301397_40309327
transcript_95991.nnic	chr3	-	908	3	FSM	ENSG00000280739.4	ENST00000688606.1	588	3	-326	6	-170	-6	multi-exon	FALSE	canonical	0	0	junction_1	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGACTCTGTATTTTTTT	498	False	NA	NA	False	AATAAA	-13	NA	40309868	40184383	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_40184586_40301236_40301397_40309322
transcript_95992.nic	chr3	-	717	2	ISM	ENSG00000280739.4	ENST00000663881.1	1377	3	12	1836	-5	-1836	5prime_fragment	FALSE	canonical	3	17	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAGAAAAAAAAAATT	819	False	NA	NA	False	AAAACA	-8	NA	40309547	40300904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_40301397_40309322
transcript_95993.known	chr3	+	987	4	FSM	ENSG00000114784.4	ENST00000232905.4	987	4	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_2	64.9461315245181	6987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTCTCTCATTCTGC	10	True	NA	73	True	AGTAAA	-23	NA	40309706	40312424	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40309973_40310892_40311057_40311469_40311572_40311969
transcript_96002.known	chr3	+	637	3	FSM	ENSG00000114784.4	ENST00000488260.1	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	980	junction_2	25.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAAAGTATTCAAATAC	24	False	NA	NA	False	NA	NA	NA	40309825	40311795	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40309973_40310892_40311057_40311469
transcript_96010.known	chr3	-	2201	3	FSM	ENSG00000223797.7	ENST00000420850.2	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	9	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCTATAAAACAGAATAATAA	-14	True	NA	NA	False	CATAAA	-9	NA	40453329	40444932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_40446848_40451704_40451783_40453121
transcript_96011.known	chr3	-	2284	5	FSM	ENSG00000223797.7	ENST00000669707.1	2284	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.292877650971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGATAAGAGAGTAAAAAGA	11	True	NA	NA	False	AATACA	-41	NA	40453174	40364063	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_40365946_40392453_40392570_40399473_40399629_40451704_40451783_40453121
transcript_96014.known	chr3	+	812	6	FSM	ENSG00000188846.14	ENST00000416518.1	812	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1988.92326649371	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTAAGCCTTTGGATT	17	False	NA	7	True	AATAAA	-25	NA	40457353	40462280	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461940
transcript_96016.known	chr3	+	966	6	FSM	ENSG00000188846.14	ENST00000435633.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1641.75471980439	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGTCAAAAAGCTCCAG	26	False	NA	NA	False	NA	NA	NA	40457362	40462168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40457748_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_96023.known	chr3	+	794	5	FSM	ENSG00000188846.14	ENST00000479563.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	3747	junction_3	246.360888738452	8294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTTTTTTTTT	540	False	NA	14	True	AATAAA	-14	NA	40457876	40462368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_96024.known	chr3	+	170	2	FSM	ENSG00000188846.14	ENST00000461368.1	170	2	0	0	0	0	multi-exon	FALSE	canonical	3	4375	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACGATGGGCCAAGAAGAT	1294	False	NA	14	True	AATACA	-13	NA	40458630	40461470	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40458737_40461406
transcript_96033.known	chr3	+	3291	5	FSM	ENSG00000177842.12	ENST00000314529.10	3291	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	11.5190060335083	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTACCTATTATTAT	4	True	NA	NA	False	NA	NA	NA	40506038	40518736	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40506139_40506303_40506377_40511469_40511597_40512401_40512516_40515859
transcript_96039.known	chr3	+	2192	4	FSM	ENSG00000177873.14	ENST00000520737.5	2192	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	7.58653778449403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGACTAGGAGAAATGCAA	1	True	NA	NA	False	NA	NA	NA	40477141	40488578	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40477358_40477917_40478004_40482587_40482705_40486805
transcript_96040.nic	chr3	+	1216	4	ISM	ENSG00000177842.12	ENST00000314529.10	3291	5	0	5419	0	845	5prime_fragment	TRUE	canonical	3	25	junction_3	11.9536140513607	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	4	True	NA	NA	False	ACTAAA	-13	NA	40506038	40513317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_40506139_40506303_40506377_40511469_40511597_40512401
transcript_96044.nnic	chr3	+	550	3	NNC	ENSG00000177842.12	novel	2022	3	NA	NA	17	-5012	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	24.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTTCGTCATGGTGTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	40506008	40507460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_40506139_40506303_40506377_40507113
transcript_96046.known	chr3	+	2022	3	FSM	ENSG00000177842.12	ENST00000418905.1	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	5	True	NA	6	True	AATAAA	-21	NA	40506039	40517709	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40506139_40506303_40506377_40515859
transcript_96050.nnic	chr3	+	559	3	NNC	ENSG00000177842.12	novel	2022	3	NA	NA	22	-5012	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTTCGTCATGGTGTAT	27	False	NA	NA	False	ATTAAA	-23	NA	40506061	40507460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_40506201_40506303_40506377_40507113
transcript_96054.known	chr3	+	4841	5	FSM	ENSG00000177873.14	ENST00000432264.4	4841	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.60977222864644	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTGTGATATTCTGT	-19	True	NA	NA	False	AATAAA	-21	NA	40477121	40491053	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40486805
transcript_96056.known	chr3	+	8389	5	FSM	ENSG00000172888.12	ENST00000339296.10	8389	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.69966214673719	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTTTAAGAGACAAAG	-4	True	NA	NA	False	CATAAA	-16	NA	40524959	40539782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40525275_40525778_40525865_40529318_40529446_40530208_40530317_40532029
transcript_96058.nnic	chr3	+	783	5	NNC	ENSG00000172888.12	novel	1979	5	NA	NA	2	5509	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	9.28372231381357	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATCTTCTATCACGTAT	5	True	NA	NA	False	NA	NA	NA	40524899	40545303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_40525039_40525778_40525865_40529318_40529446_40530208_40530317_40544980
transcript_96059.known	chr3	+	536	5	FSM	ENSG00000172888.12	ENST00000462161.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.8483869768736	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAAGCTTATTCGGCAT	1	True	NA	NA	False	AATGAA	-42	NA	40525005	40532257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40525039_40525778_40525865_40529494_40529576_40530208_40530317_40532029
transcript_96064.known	chr3	+	2404	6	FSM	ENSG00000172888.12	ENST00000310898.5	2404	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.93532316147547	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAAGTTTTCTATGTTG	NA	False	NA	NA	False	CATAAA	-28	NA	40524877	40539794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40525275_40525778_40525865_40529318_40529446_40530208_40530317_40532029_40532207_40538285
transcript_96065.known	chr3	+	255	1	FSM	ENSG00000234287.1	ENST00000457554.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	801	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	33	False	NA	NA	False	NA	NA	NA	40761544	40761799	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40761500_40761800
transcript_96073.nic	chr3	-	1936	18	NIC	ENSG00000168038.11	novel	1904	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	7.02048411662856	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGACTCCGTGTGGCAGT	16	False	41962132	-5	True	AATAAA	-20	NA	41962116	41882149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_41882281_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_96076.nnic	chr3	-	1847	17	NIC	ENSG00000168038.11	novel	1904	18	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_10	8.53462616345906	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGACTCCGTGTGGCAGT	29	False	41962132	-5	True	AATAAA	-20	NA	41962103	41882149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_41882281_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_96082.known	chr3	-	647	4	FSM	ENSG00000168038.11	ENST00000414606.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	12.657891697365	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGAATTTGGCTGT	2	True	NA	43	True	NA	NA	NA	41962130	41937094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_41937341_41938097_41938198_41954621_41954808_41962015
transcript_96084.nnic	chr3	-	907	3	NIC	ENSG00000168038.11	novel	1028	4	NA	NA	-81	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCAGCCTGCCAGCATC	NA	False	NA	-10	True	AATAAA	-20	NA	41278232	41246598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_41246993_41249488_41249575_41277805
transcript_96085.known	chr3	-	4294	37	FSM	ENSG00000168038.11	ENST00000301831.9	4294	37	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_5	9.1000949662661	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTCAGCCTGCCAGCATC	29	False	41962132	-10	True	AATAAA	-20	NA	41962103	41246598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_41246993_41249488_41249575_41398078_41398265_41455496_41455596_41463086_41463254_41566024_41566131_41615668_41615718_41663606_41663700_41681507_41681653_41681752_41681805_41705056_41705152_41705253_41705306_41715236_41715294_41715446_41715569_41717727_41717862_41754360_41754489_41789660_41789844_41800131_41800294_41819422_41819507_41835863_41835972_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_96086.known	chr3	+	3052	17	FSM	ENSG00000168036.18	ENST00000453024.6	3052	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	315.683979637865	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAATGGTACTGACTTT	115	False	NA	NA	False	NA	NA	NA	41199444	41239947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_96087.known	chr3	+	2770	17	FSM	ENSG00000168036.18	ENST00000646116.1	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	310.28573021491	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	20	False	NA	NA	False	NA	NA	NA	41199524	41239904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_96089.known	chr3	+	3321	16	FSM	ENSG00000168036.18	ENST00000644678.1	3321	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	308.094718480463	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAATTTATCAAACCCT	89	False	NA	NA	False	NA	NA	NA	41199418	41239885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_96091.known	chr3	+	3472	16	FSM	ENSG00000168036.18	ENST00000396185.8	3472	16	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_15	146.643998248214	3824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCACTCTTTCTTT	59	False	NA	30	True	ATTAAA	-15	NA	41199388	41240443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_96092.known	chr3	+	2778	16	FSM	ENSG00000168036.18	ENST00000645982.1	2778	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	232.685156858409	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGACTTTGCTTGCTT	112	False	NA	NA	False	NA	NA	NA	41199441	41239955	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239812
transcript_96094.known	chr3	+	2890	16	FSM	ENSG00000168036.18	ENST00000642315.1	2890	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	250.595876528991	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	3	True	NA	NA	False	NA	NA	NA	41200142	41239904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_96095.known	chr3	+	2764	16	FSM	ENSG00000168036.18	ENST00000450969.6	2764	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	242.33581841917	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGCTTGTTAAATTTTT	-2	True	NA	NA	False	NA	NA	NA	41200111	41239906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_96096.known	chr3	+	3086	15	FSM	ENSG00000168036.18	ENST00000644873.1	3086	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	240.669728813881	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	33	False	NA	NA	False	NA	NA	NA	41199537	41239904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235726_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_96097.known	chr3	+	3283	15	FSM	ENSG00000168036.18	ENST00000643297.1	3283	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	227.98836346961	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTTGCTTGCTTTGAAG	-3	True	NA	NA	False	NA	NA	NA	41200110	41239960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_96098.known	chr3	+	2777	13	FSM	ENSG00000168036.18	ENST00000644138.1	2777	13	0	0	0	0	multi-exon	FALSE	canonical	3	829	junction_8	33.2001506020681	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGGTACACAGACATACA	0	True	NA	NA	False	AATAAA	-42	NA	41199504	41237196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587
transcript_96102.known	chr3	+	4620	13	FSM	ENSG00000182606.17	ENST00000341421.7	4620	13	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	38.508566867935	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATTATAGTTTTACTTT	0	True	NA	NA	False	ATTAAA	-20	NA	42160168	42212623	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766
transcript_96104.known	chr3	-	747	3	FSM	ENSG00000187094.12	ENST00000434608.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCGTTCCCTGCGTCT	2236	False	NA	-5	True	ATTAAA	-15	NA	42263947	42257825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42258232_42263416_42263633_42263822
transcript_96105.known	chr3	-	830	3	FSM	ENSG00000187094.12	ENST00000334681.9	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCGTTCCCTGCGTCTA	-6	True	NA	-4	True	ATTAAA	-16	NA	42264903	42257824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42258232_42263416_42263633_42264696
transcript_96106.nic	chr3	-	840	2	ISM	ENSG00000187094.12	ENST00000434608.1	747	3	97	0	97	0	intron_retention	FALSE	canonical	3	21	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGTCGTTCCCTGCGTCT	2333	False	NA	-5	True	ATTAAA	-15	NA	42263850	42257825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_42258232_42263416
transcript_96142.known	chr3	-	1446	8	FSM	ENSG00000093183.14	ENST00000449617.5	1446	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	75.2090962800731	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATACTTGCTGTTCA	4	True	NA	NA	False	NA	NA	NA	42581962	42548182	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42563764_42563881_42568864_42569074_42581845
transcript_96155.known	chr3	-	1608	7	FSM	ENSG00000093183.14	ENST00000273156.11	1608	7	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	31.7144376515737	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	294	False	NA	-24	True	AATAAA	-16	NA	42582028	42547970	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_96158.known	chr3	-	6340	7	FSM	ENSG00000093183.14	ENST00000264454.8	6340	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	48.7054639873415	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-1	True	NA	-22	True	AATAAA	-18	NA	42581967	42547968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42553449_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_96161.known	chr3	+	646	6	FSM	ENSG00000114857.19	ENST00000442970.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	24.5796663931795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGTTTGTATGTTTTCT	10	True	NA	NA	False	AATAAA	-19	NA	42600742	42620316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42620015
transcript_96163.known	chr3	-	1458	6	FSM	ENSG00000093183.14	ENST00000423701.6	1458	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	72.6652599252215	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	24	True	NA	-22	True	AATAAA	-18	NA	42581942	42547968	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42548658_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_9619.known	chr1	+	1319	10	FSM	ENSG00000159352.16	ENST00000368884.8	1319	10	0	0	0	0	multi-exon	FALSE	canonical	3	2133	junction_4	226.530405666343	6075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGGTTTTGAGTGTG	-18	True	NA	38	True	AATAAA	-34	NA	151254733	151267479	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_96190.known	chr3	-	827	5	FSM	ENSG00000093183.14	ENST00000493107.5	827	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	78.696807432068	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGCTTGTTGTTCCCTG	421	False	NA	NA	False	NA	NA	NA	42581901	42561114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42561297_42563522_42563687_42563764_42563981_42568864_42569074_42581845
transcript_96191.known	chr3	+	1047	4	FSM	ENSG00000008324.12	ENST00000447630.5	1047	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	525.750468906644	6967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTGATTTCTAATTA	NA	False	NA	NA	False	TATAAA	-29	NA	42581839	42595114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42581959_42590808_42590967_42591524_42591602_42594421
transcript_96192.known	chr3	+	2697	3	FSM	ENSG00000008324.12	ENST00000011691.6	2697	3	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	65.5	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTTACATTGAAGCCTG	-19	True	NA	NA	False	ATTAAA	-24	NA	42590859	42596934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42590967_42591524_42591602_42594421
transcript_96193.known	chr3	+	2134	2	FSM	ENSG00000114857.19	ENST00000459950.1	2134	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGATTGCTGAAGAGTA	40	False	NA	NA	False	AAAAAG	-16	NA	42600717	42603056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42600779_42600983
transcript_96194.known	chr3	+	2335	6	FSM	ENSG00000114857.19	ENST00000487466.5	2335	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	24.2371615499835	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAAACTTTCTGC	-6	True	NA	NA	False	NA	NA	NA	42600671	42627310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42621517_42627199
transcript_962.known	chr1	-	727	4	FSM	ENSG00000162585.17	ENST00000378546.9	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	1055	junction_3	145.684590811794	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-6	True	NA	-14	True	ATTAAA	-40	NA	2194772	2189547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2189782_2193638_2193911_2193997_2194134_2194687
transcript_9620.known	chr1	+	649	4	FSM	ENSG00000159352.16	ENST00000427779.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1277.68723350696	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTTGCTTCAAAT	NA	False	NA	19	True	AATAAA	-15	NA	151266037	151267460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151266199_151266307_151266440_151266519_151266588_151267172
transcript_96206.known	chr3	-	585	4	FSM	ENSG00000181061.14	ENST00000452906.3	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	1690.68197942592	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTGGAGGAGCTTGC	2	True	NA	-117	True	NA	NA	NA	42804433	42785251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804171
transcript_96207.known	chr3	-	1322	4	FSM	ENSG00000181061.14	ENST00000418900.6	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	1694.91992600109	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTATTAAAGTAAGTG	3	True	NA	-33	True	NA	NA	NA	42804488	42784329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794300_42804435
transcript_96213.known	chr3	-	983	3	FSM	ENSG00000181061.14	ENST00000470543.1	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1822	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTTTCCATAAGAAT	3	True	NA	NA	False	AATGAA	-23	NA	42804488	42784525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42785321_42786027_42786163_42804435
transcript_96216.known	chr3	-	1267	6	FSM	ENSG00000244607.7	ENST00000492806.5	1267	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.6	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTCAGACTTGGGAC	-16	True	NA	NA	False	ATTAAA	-16	NA	42773253	42746793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42747374_42751935_42752026_42752574_42752718_42757065_42757215_42758124_42758352_42773175
transcript_96217.known	chr3	-	741	4	FSM	ENSG00000181061.14	ENST00000430190.5	741	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1504.08384813554	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATAAGAGTCCTATTTG	1	True	NA	NA	False	NA	NA	NA	42804490	42784904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42785337_42786027_42786163_42794156_42794276_42804435
transcript_96219.known	chr3	+	5188	7	FSM	ENSG00000163788.14	ENST00000296088.12	5188	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.36545993132812	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCTGTGTTGTATTG	-28	True	NA	NA	False	AATAAA	-29	NA	43286539	43351143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43286676_43299753_43299816_43303097_43303793_43332168_43332311_43340286_43340500_43343343_43343479_43347338
transcript_96221.known	chr3	+	5128	6	FSM	ENSG00000163788.14	ENST00000429705.6	5128	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.6585939187573	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCTGTGTTGTATTG	-30	True	NA	NA	False	AATAAA	-29	NA	43286537	43351143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43286676_43303097_43303793_43332168_43332311_43340286_43340500_43343343_43343479_43347338
transcript_9623.known	chr1	+	4795	9	FSM	ENSG00000143373.18	ENST00000336715.11	4795	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	10.552695153372	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGAGCTCTTTTCCCTGG	12	True	NA	1	True	AATAAA	-4	NA	151282298	151292176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151282396_151286274_151288407_151288527_151288707_151289094_151289272_151289377_151289541_151289677_151290008_151290121_151290235_151290431_151290574_151290714
transcript_96233.known	chr3	-	3155	13	FSM	ENSG00000160746.13	ENST00000292246.8	3155	13	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_12	21.6275287538822	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGAAGGTGAGAAGG	5521	False	43622038	NA	False	NA	NA	NA	43622011	43365847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_96239.known	chr3	-	2419	12	FSM	ENSG00000160746.13	ENST00000396091.7	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_10	78.5843758786147	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGGCAACCTCTCTGA	-11	True	NA	-45	True	CATAAA	-17	NA	43621984	43366358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43605713_43605864_43621908
transcript_96241.known	chr3	-	2039	12	FSM	ENSG00000160746.13	ENST00000350459.8	2039	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	81.1643572793008	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	8	True	NA	-34	True	ATTAAA	-6	NA	43621965	43366347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_96245.known	chr3	-	2019	11	FSM	ENSG00000160746.13	ENST00000451430.6	2019	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	87.5377061614022	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGCTGCAGAGCCACTG	-30	True	NA	NA	False	NA	NA	NA	43622003	43366642	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43605713_43605864_43621908
transcript_96278.nic	chr3	-	805	2	ISM	ENSG00000160746.13	ENST00000414522.6	2450	13	249101	-203	-6702	-5	3prime_fragment	FALSE	canonical	2	18	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAACCTCTCTGACTCCTT	NA	False	NA	-39	True	ATTAAA	-1	NA	43372910	43366352	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_43366975_43372727
transcript_96279.nic	chr3	-	1484	2	ISM	ENSG00000160746.13	ENST00000428472.5	592	4	-30	27470	-22	1232	5prime_fragment	FALSE	canonical	3	245	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGATACAAGAGCAGCAAA	5	True	NA	NA	False	TATAAA	-33	NA	43622033	43604504	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_43605864_43621908
transcript_9628.known	chr1	-	637	2	FSM	ENSG00000232671.7	ENST00000660511.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAACACGCTTTGTAAAG	439	False	NA	-6	True	ATTAAA	-12	NA	151281950	151280029	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151280259_151281542
transcript_96280.known	chr3	-	746	6	FSM	ENSG00000160746.13	ENST00000427171.5	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	109.494474746446	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTCAACCAAATTATGGA	5466	False	NA	NA	False	NA	NA	NA	43622066	43561372	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43561403_43565652_43565728_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_96283.known	chr3	+	2630	8	FSM	ENSG00000011198.10	ENST00000646378.1	2630	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.4646599360003	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGTAGCTATGTAAATAAA	32	False	NA	-21	True	NA	NA	NA	43690968	43719837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43691040_43694902_43695154_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_96287.known	chr3	+	5298	7	FSM	ENSG00000011198.10	ENST00000644371.2	5298	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_5	17.7200451466693	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTATTTTTAG	1	True	NA	2	True	AATAAA	-13	NA	43690937	43722725	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_9629.nnic	chr1	-	1280	2	NNC	ENSG00000232671.7	novel	987	2	NA	NA	-30	3460	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAATTCTTGAACTT	0	True	NA	NA	False	NA	NA	NA	151282000	151276217	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_151277040_151281542
transcript_96291.known	chr3	+	1241	6	FSM	ENSG00000011198.10	ENST00000458276.7	1241	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	58.9474342104896	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTACTGAAAAACTGTA	96	False	NA	21	True	AATAAA	-17	NA	43690879	43718797	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43718442
transcript_96293.known	chr3	+	1255	6	FSM	ENSG00000011198.10	ENST00000643500.1	1255	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	61.4556750837545	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAATACCTTTAAATAAAA	7	True	NA	-14	True	AATATA	-13	NA	43690905	43718762	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43717670_43717858_43718442
transcript_96300.known	chr3	+	618	2	FSM	ENSG00000011198.10	ENST00000486764.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATACT	-7	True	NA	NA	False	AATAAA	-14	NA	43690891	43699745	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43691040_43699275
transcript_96301.known	chr3	-	1069	1	FSM	ENSG00000272121.1	ENST00000606217.1	1069	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTCTACACTGGATT	NA	False	NA	2	True	ATTAAA	-19	NA	43999149	43998080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43998100_43999100
transcript_96305.known	chr3	+	1844	11	FSM	ENSG00000179152.20	ENST00000417237.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	16.7764716195033	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCTGCTTTAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	44338118	44407790	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367455_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_96307.nic	chr3	+	3440	11	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_4	13.2875881934985	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTTTTCTTGTTA	NA	False	NA	6	True	AATAAA	-17	NA	44338104	44409448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_96308.known	chr3	+	3370	11	FSM	ENSG00000179152.20	ENST00000342649.9	3370	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	17.4482090771517	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTTTTCTTGTTA	15	True	NA	6	True	AATAAA	-17	NA	44338765	44409448	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367455_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_96309.known	chr3	+	3306	11	FSM	ENSG00000179152.20	ENST00000412611.6	3306	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	14.2579802216162	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTTCTTGTTACCC	6	True	NA	9	True	AATAAA	-20	NA	44338756	44409451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_96335.nic	chr3	+	1196	5	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_4	26.2154534578367	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	NA	False	NA	7	True	AATAAA	-13	NA	44338104	44363037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_96336.nic	chr3	+	947	5	ISM	ENSG00000179152.20	ENST00000417237.5	1844	11	-14	39966	-14	-55	5prime_fragment	FALSE	canonical	3	15	junction_4	23.3505888576712	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACCTAATTTTCCAGG	NA	False	NA	NA	False	AATAAA	-22	NA	44338104	44367824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367455
transcript_9634.known	chr1	-	307	2	FSM	ENSG00000232671.7	ENST00000494138.5	397	2	90	0	49	0	multi-exon	FALSE	canonical	2	5	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTTTGTAAAGTAATTG	509	False	NA	0	True	ATTAAA	-18	NA	151281880	151280023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151280259_151281808
transcript_96340.known	chr3	+	1056	5	FSM	ENSG00000179152.20	ENST00000444602.2	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	26.3853652618265	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	9	True	NA	7	True	AATAAA	-13	NA	44338759	44363037	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_96342.known	chr3	+	794	5	FSM	ENSG00000179152.20	ENST00000462230.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	19.1441897190766	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTATGAAAAATATATTTC	1	True	NA	NA	False	NA	NA	NA	44338751	44367879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367531
transcript_96345.known	chr3	+	1998	4	FSM	ENSG00000179152.20	ENST00000383746.7	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	20.757863302587	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGAGTTCTGTGAATC	NA	False	NA	11	True	AATAAA	-23	NA	44338118	44359804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44358216
transcript_96349.known	chr3	+	2178	4	FSM	ENSG00000179152.20	ENST00000396078.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	22.2910046630673	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTGAGTTCTGTGAA	7	False	NA	9	True	AATAAA	-21	NA	44338451	44359802	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44358216
transcript_9635.known	chr1	+	481	1	FSM	ENSG00000273481.1	ENST00000609583.1	481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCAAATGGGCCTCTGG	NA	False	NA	NA	False	AATAAA	-11	NA	151327948	151328429	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151327900_151328400
transcript_96352.known	chr3	-	612	1	FSM	ENSG00000271937.1	ENST00000607510.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCCGGCTTGTGTTGT	NA	False	NA	-1	True	TATAAA	-22	NA	44338552	44337940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44337900_44338600
transcript_96353.known	chr3	+	838	4	FSM	ENSG00000283036.3	ENST00000634998.2	838	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGTGTTTCATTATTT	1	True	NA	NA	False	AATAAA	-16	NA	44427949	44429529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44428159_44428554_44428625_44428846_44428942_44429065
transcript_96355.nnic	chr3	+	1150	3	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1.5	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAGAAAAAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	44477694	44482156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_+_44478210_44478581_44478670_44481609
transcript_96357.nnic	chr3	-	564	3	NNC	ENSG00000185219.18	novel	18314	8	NA	NA	-1	1963	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	20.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCTGAAACAAATTTGAC	-5	True	NA	NA	False	AAAAAG	-1	NA	44477671	44452915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44453370_44458335_44458365_44477590
transcript_96359.known	chr3	-	18314	8	FSM	ENSG00000185219.18	ENST00000396077.8	18314	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	6.67618368317024	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTTGTCAGTTTTATG	-4	True	NA	2	True	AATAAA	-32	NA	44477670	44431704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44448740_44449512_44449624_44450446_44450574_44450867_44450963_44451313_44451483_44455120_44455697_44458243_44458365_44477590
transcript_96360.known	chr3	-	729	2	FSM	ENSG00000225873.4	ENST00000416124.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACGTTTCCTAGAGCTTCC	21	False	44424013	NA	False	AGTAAA	-21	NA	44424007	44421129	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44421814_44423962
transcript_96362.nnic	chr3	-	1800	5	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-11	3081	at_least_one_novel_splicesite	TRUE	canonical	3	14	junction_4	9.65336728815391	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	NA	False	NA	-8	True	AATAAA	-19	NA	44510647	44491765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44502964_44503057_44510552
transcript_96363.nnic	chr3	-	2145	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-28	3081	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	14.522013940528	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	NA	False	NA	-8	True	AATAAA	-19	NA	44510664	44491765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44492508_44499473_44500638_44502541_44502669_44510552
transcript_96364.nnic	chr3	-	1725	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-28	3081	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	2.35702260395516	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	NA	False	NA	-8	True	AATAAA	-19	NA	44510664	44491765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44510552
transcript_96366.nic	chr3	-	1177	4	NIC	ENSG00000178917.17	novel	1966	5	NA	NA	-11	-199	combination_of_known_junctions	FALSE	canonical	3	14	junction_3	7.93025150224688	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCAGTCGGAGTAAATG	NA	False	NA	NA	False	TATAAA	-19	NA	44510647	44499774	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_44500638_44502541_44502669_44502964_44503057_44510552
transcript_96369.known	chr3	-	1326	3	FSM	ENSG00000178917.17	ENST00000489411.1	1326	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	2.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCAATCAAAACTCATA	-16	True	NA	NA	False	TATAAA	-19	NA	44510636	44499522	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44500638_44502541_44502669_44510552
transcript_96372.nnic	chr3	-	1209	2	NNC	ENSG00000178917.17	novel	1966	5	NA	NA	-36	-6262	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGATTGTTTCTTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	44510672	44505837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44506927_44510552
transcript_9638.known	chr1	-	2459	11	FSM	ENSG00000143390.18	ENST00000368870.6	2459	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	99.4034204642878	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTCATGTAACTAGAAAG	NA	False	NA	-14	True	AATAAA	-11	NA	151347326	151341828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151347210
transcript_96381.known	chr3	+	7530	6	FSM	ENSG00000186448.15	ENST00000344387.9	7530	6	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	9.71596624119289	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	-3	True	NA	9	True	AATAAA	-19	NA	44625035	44648471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44625144_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
transcript_96386.known	chr3	+	2935	6	FSM	ENSG00000186448.15	ENST00000383745.6	2935	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	19.1039262980153	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	10	True	NA	9	True	AATAAA	-19	NA	44625048	44648471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44625144_44629064_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44646490
transcript_96389.nnic	chr3	+	651	4	NNC	ENSG00000144792.9	novel	556	4	NA	NA	-132	6668	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	14.9740516301441	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTACACATTGCATGCTT	NA	False	NA	NA	False	AATAAA	-39	NA	44584829	44606362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44585008_44586104_44586214_44594013_44594173_44606157
transcript_96392.known	chr3	+	5834	3	FSM	ENSG00000144792.9	ENST00000322734.2	5834	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	4	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCACTTTTTTTTTCTTTT	-6	True	NA	NA	False	AATAAA	-20	NA	44584963	44599694	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44585008_44586104_44586214_44594013
transcript_96398.known	chr3	-	623	2	FSM	ENSG00000233509.2	ENST00000447691.2	623	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAATGAATGAGTATTA	NA	False	NA	NA	False	NA	NA	NA	44624797	44617127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44617675_44624721
transcript_96400.known	chr3	+	620	4	FSM	ENSG00000169981.11	ENST00000415571.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	10.5303793326209	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTCATCATATCAGAAAG	-7	True	NA	NA	False	NA	NA	NA	44648740	44658765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44648835_44650943_44651260_44652556_44652702_44658700
transcript_96405.known	chr3	+	2503	3	FSM	ENSG00000169981.11	ENST00000296092.7	2503	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	12.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	-6	True	NA	23	True	AATAAA	-23	NA	44648741	44660791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44648835_44650940_44651260_44658700
transcript_96407.known	chr3	+	564	3	FSM	ENSG00000169981.11	ENST00000399560.2	564	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCAGACAAGTGATAG	-6	True	NA	NA	False	AATAAA	-13	NA	44648741	44658878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44648812_44650943_44651260_44658700
transcript_96409.known	chr3	+	581	3	FSM	ENSG00000169981.11	ENST00000453164.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGAATGACTGTCACTTA	-3	True	NA	NA	False	AATAAA	-30	NA	44648744	44658895	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44648812_44650940_44651260_44658700
transcript_96410.known	chr3	+	3270	4	FSM	ENSG00000196653.12	ENST00000296091.8	3270	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.1455023315337	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTATTTGGAACTC	-11	True	NA	20	True	ATTAAA	-22	NA	44712645	44723831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44712745_44714590_44714689_44720202_44720317_44720872
transcript_96411.known	chr3	+	593	3	FSM	ENSG00000196653.12	ENST00000411443.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTAATGAATGTGGAAA	19	True	NA	NA	False	AGTAAA	-34	NA	44712675	44721282	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44712745_44720202_44720317_44720872
transcript_96413.nic	chr3	+	358	3	NIC	ENSG00000186446.12	novel	3099	3	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_2	7.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTTTCAAGTGATTTC	-26	True	NA	NA	False	ATTAAA	-19	NA	44729608	44732265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_44729723_44731475_44731561_44732106
transcript_96414.known	chr3	+	3099	3	FSM	ENSG00000186446.12	ENST00000396048.6	3099	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	NA	False	NA	7	True	AATAAA	-19	NA	44729595	44737083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44729723_44731475_44731561_44734196
transcript_96417.known	chr3	+	479	3	FSM	ENSG00000186446.12	ENST00000484233.1	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTTTCAAGTGATTTC	146	False	NA	NA	False	ATTAAA	-19	NA	44729780	44732265	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44730016_44731475_44731561_44732106
transcript_96418.known	chr3	+	3353	3	FSM	ENSG00000186446.12	ENST00000620116.5	3353	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	8.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	0	True	NA	7	True	AATAAA	-19	NA	44729634	44737083	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44730016_44731475_44731561_44734196
transcript_96426.known	chr3	-	5079	3	FSM	ENSG00000163807.6	ENST00000296121.6	5079	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	27	1217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGTCTGTAATT	-4	True	NA	NA	False	AATAAA	-16	NA	44761619	44748743	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44753553_44754223_44754369_44761494
transcript_96427.known	chr3	+	4760	35	FSM	ENSG00000163808.17	ENST00000326047.9	4760	35	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_21	24.0970679776837	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	6	True	NA	10	True	AATAAA	-21	NA	44761793	44853256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
transcript_96431.nic	chr3	+	2839	21	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-92	27092	-19	-1326	5prime_fragment	FALSE	canonical	3	136	junction_14	17.9311879137998	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTCTGAAATCTGATC	NA	False	NA	20	True	AAAAAG	-5	NA	44761701	44826164	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038
transcript_96433.nic	chr3	+	1445	13	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-20	51438	-20	-11452	5prime_fragment	FALSE	canonical	3	162	junction_12	15.0277521051331	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTCAATCTAATAAAAT	-14	True	NA	NA	False	AAAAAG	-39	NA	44761773	44801818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764
transcript_96435.nic	chr3	+	2065	4	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-26	73421	-26	-33435	5prime_fragment	FALSE	canonical	3	167	junction_1	16.5730705262081	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGATTACCCTATTTG	-20	True	NA	NA	False	NA	NA	NA	44761767	44779835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114
transcript_96437.nnic	chr3	+	1089	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	37.6327280730778	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	5	False	NA	22	True	AATAAA	-22	NA	44861868	44865664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865039
transcript_96438.nnic	chr3	+	994	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	20.0720922897661	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	5	False	NA	22	True	AATAAA	-22	NA	44861868	44865664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865134
transcript_96452.known	chr3	+	977	3	FSM	ENSG00000169964.8	ENST00000302392.5	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	34.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	10	True	NA	22	True	AATAAA	-22	NA	44861911	44865664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44862117_44864196_44864344_44865039
transcript_96455.nnic	chr3	+	897	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-13	0	at_least_one_novel_splicesite	TRUE	canonical	3	19	junction_1	46	173	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	-11	True	NA	22	True	AATAAA	-22	NA	44861890	44865664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862016_44864196_44864344_44865039
transcript_96463.known	chr3	+	3071	2	FSM	ENSG00000169964.8	ENST00000477126.1	3071	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACGGTATCTTAATTCTT	2	True	NA	28	True	AATAAA	-28	NA	44861903	44865670	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44864344_44865039
transcript_96468.known	chr3	-	12594	7	FSM	ENSG00000163812.15	ENST00000424952.7	12594	7	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_1	26.5920831994955	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGAGTCTCCTGTTT	-18	True	NA	-5	True	AATAAA	-21	NA	44976174	44915260	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_96475.known	chr3	+	1042	8	FSM	ENSG00000075914.13	ENST00000265564.8	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	876	junction_3	84.9196498978623	7051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTATGTCTAGAGT	-15	True	NA	8	True	ATTAAA	-16	NA	44976243	45011471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
transcript_96476.known	chr3	+	1395	9	FSM	ENSG00000075914.13	ENST00000491476.5	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_8	315.831343441401	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTGAATAAAGTTTAGA	5	True	NA	-22	True	AAAACA	-30	NA	44976263	45012633	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_96477.known	chr3	-	5963	9	FSM	ENSG00000163814.8	ENST00000296129.6	5963	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	25.4014640326104	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTTTCAAGTCTCC	5	True	NA	-8	True	AATAAA	-25	NA	45146378	45082276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45086068_45089053_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146205
transcript_96480.known	chr3	-	1416	4	FSM	ENSG00000163814.8	ENST00000425231.2	1416	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	10.9848380355227	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTGAAAGGTCATTTTT	25	False	NA	3	True	AATAAA	-42	NA	45146422	45110215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45110842_45112082_45112446_45118411_45118622_45146205
transcript_96483.known	chr3	+	4781	22	FSM	ENSG00000011376.12	ENST00000645846.2	4781	22	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_5	21.1783271754431	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTACAAGGAAGGAGTG	3	True	NA	NA	False	ATTAAA	-19	NA	45388575	45549407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_96486.known	chr3	+	10049	21	FSM	ENSG00000011376.12	ENST00000650792.2	10049	21	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	42.2570704143106	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATGGTATATTGAGTG	-12	True	NA	14	True	AATAAA	-28	NA	45388560	45554726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45388681_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_9649.known	chr1	+	618	2	FSM	ENSG00000237976.2	ENST00000455503.2	647	2	29	0	29	0	multi-exon	FALSE	canonical	3	134	junction_1	0	1077	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGAACATTGTACTGA	15	True	NA	NA	False	NA	NA	NA	151346966	151348027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151347189_151347631
transcript_96493.nnic	chr3	+	682	5	NNC	ENSG00000011376.12	novel	4781	22	NA	NA	-67	-5172	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	95.9127207413073	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGTACTCATGAAAAC	NA	False	NA	NA	False	AATATA	-23	NA	45388493	45417237	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417192
transcript_96494.known	chr3	+	566	5	FSM	ENSG00000011376.12	ENST00000430399.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	101.737407083137	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATGAGAGGGATGCAG	0	True	NA	NA	False	NA	NA	NA	45388618	45400353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45388681_45389032_45389107_45391582_45391649_45394432_45394688_45400244
transcript_96498.known	chr3	+	2164	21	FSM	ENSG00000211456.13	ENST00000418611.5	2164	21	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_2	159.920441157471	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGATGACAGAATTGATC	NA	False	NA	NA	False	NA	NA	NA	45689240	45743804	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45689498_45690347_45690388_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_965.nnic	chr1	-	655	4	NNC	ENSG00000162585.17	novel	727	4	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	104	junction_2	551.033574294707	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	332	False	NA	-14	True	ATTAAA	-40	NA	2194730	2189547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_2189782_2193638_2193911_2194027_2194134_2194687
transcript_96503.known	chr3	-	1384	2	FSM	ENSG00000230530.2	ENST00000655322.1	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTGTTTTCTTTCTA	NA	False	NA	0	True	TTTAAA	-24	NA	45689200	45679512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45680072_45688375
transcript_96504.known	chr3	-	955	2	FSM	ENSG00000230530.2	ENST00000429798.1	955	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATCTGAATCACCTCAAT	NA	False	NA	NA	False	TATAAA	-17	NA	45689134	45679231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45680072_45689019
transcript_96505.known	chr3	+	2013	19	FSM	ENSG00000211456.13	ENST00000441228.5	2013	19	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_3	131.039917111326	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTTCATTGTATTCTAT	-18	True	NA	27	True	ATTAAA	-37	NA	45689354	45743935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_96507.known	chr3	-	4026	10	FSM	ENSG00000163818.19	ENST00000296135.11	4026	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	6.58280588604383	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTTGGAAAATCCTTT	-14	True	NA	NA	False	ATTAAA	-25	NA	45842119	45823315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
transcript_96512.known	chr3	-	986	9	FSM	ENSG00000163818.19	ENST00000411866.5	986	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	14.456832294801	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTTGTCATATCCCCT	-24	True	NA	NA	False	NA	NA	NA	45842129	45826240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45841988
transcript_96517.nnic	chr3	+	412	3	NNC	ENSG00000288717.1	novel	321	3	NA	NA	-90	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTGGCCAGAAAACAG	75	False	NA	NA	False	AATAAA	-15	NA	45995867	46001230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_45996090_46000912_46000956_46001083
transcript_96518.nnic	chr3	+	396	3	NNC	ENSG00000288717.1	novel	321	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGCTGTCAACAGG	144	False	NA	NA	False	CATAAA	-25	NA	45995936	46001283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_45996090_46000912_46000956_46001083
transcript_96519.known	chr3	+	321	3	FSM	ENSG00000288717.1	ENST00000683405.1	321	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGCTGTCAACAGG	165	False	NA	NA	False	CATAAA	-25	NA	45995957	46001283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45996036_46000912_46000956_46001083
transcript_96522.nnic	chr3	-	703	2	ISM	ENSG00000223552.2	ENST00000691693.1	825	3	13966	0	13936	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTGGTCTCTTA	7285	False	NA	3	True	ATTAAA	-22	NA	46393117	46387722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_46388133_46392824
transcript_96524.known	chr3	-	2721	17	FSM	ENSG00000012223.13	ENST00000231751.9	2721	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.78535710713571	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTTTATTCCAAAGCTA	0	True	NA	NA	False	TATAAA	-2	NA	46464905	46435644	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46436230_46437939_46438130_46439295_46439481_46441415_46441484_46443440_46443583_46445280_46445437_46446439_46446494_46447307_46447399_46448862_46449018_46449853_46450029_46450494_46450674_46454304_46454361_46455294_46455443_46455795_46455979_46456289_46456399_46459655_46459820_46464824
transcript_96529.known	chr3	-	4890	9	FSM	ENSG00000163827.14	ENST00000395905.8	4890	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	8.8175960442742	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTTCTAAAAGCTT	-4	True	NA	NA	False	AATAAA	-19	NA	46566302	46515384	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46566176
transcript_9653.known	chr1	-	1724	12	FSM	ENSG00000143416.21	ENST00000443708.5	1724	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	73.4852546068128	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGATGGCCTTGTCTTTG	-4	True	NA	-44	True	AATAAA	-16	NA	151372707	151364307	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151368999_151369190_151369441_151369555_151369712_151369770_151372637
transcript_96535.known	chr3	-	1963	9	FSM	ENSG00000163827.14	ENST00000296144.3	1963	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	14.764293921485	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGATTGTGAAAAGAGCAT	NA	False	NA	NA	False	AAAAAG	-16	NA	46580099	46518348	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46579936
transcript_9654.known	chr1	-	1887	12	FSM	ENSG00000143416.21	ENST00000423070.5	1887	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	89.582225952538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCACCAAGAAATAAACTCG	11	False	NA	-75	True	NA	NA	NA	151372692	151364338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151368999_151369190_151369441_151369555_151369712_151369979_151372637
transcript_96540.known	chr3	+	1192	6	FSM	ENSG00000241186.10	ENST00000542931.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	2	143	junction_1	2597.31738530354	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGATTGAATTATAT	-1	True	NA	NA	False	NA	NA	NA	46574533	46581860	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_46574584_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_96554.known	chr3	-	561	2	FSM	ENSG00000163827.14	ENST00000469912.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGGGGCTACTCTGTT	10	True	NA	NA	False	NA	NA	NA	46566234	46551107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46551611_46566176
transcript_96556.known	chr3	+	1956	6	FSM	ENSG00000241186.10	ENST00000296145.6	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	6013	junction_4	380.453623980637	11912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGTGAACTGGTTAT	-6	True	NA	22	True	AGTAAA	-18	NA	46577787	46582457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_96557.known	chr3	-	654	5	FSM	ENSG00000286570.1	ENST00000669501.1	654	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGCCTGTCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	46661507	46647170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46647273_46649304_46649379_46659034_46659106_46660233_46660277_46661143
transcript_96561.known	chr3	+	1634	4	FSM	ENSG00000181585.7	ENST00000644830.1	1634	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.82842712474619	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTGTGAATAAAGCTGA	735	False	NA	NA	False	NA	NA	NA	46694527	46710853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_46694619_46705789_46705908_46709125_46709276_46709578
transcript_96565.nnic	chr3	-	1421	3	Fusion	ENSG00000226074.5_ENSG00000286651.2	novel	855	5	NA	NA	-106	12	intron_retention	FALSE	canonical	0	0	junction_2	3	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGCTCTGCTCACTGGCGA	NA	False	NA	NA	False	AATAAA	-24	NA	46812592	46753032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_-_46753922_46754487_46754649_46812221
transcript_96567.known	chr3	-	328	2	FSM	ENSG00000226074.5	ENST00000522832.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCTGGAGTTTACACAG	NA	False	NA	NA	False	NA	NA	NA	46811341	46809497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46809590_46811105
transcript_96568.known	chr3	-	885	7	FSM	ENSG00000160808.11	ENST00000292327.6	885	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	0.957427107756338	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACTTATTTCCCTTC	-5	True	NA	0	True	AATAAA	-21	NA	46863444	46857871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46858102_46858230_46858273_46858383_46858462_46859474_46859649_46860675_46860826_46860959_46860988_46863261
transcript_96569.known	chr3	-	1012	6	FSM	ENSG00000160808.11	ENST00000395869.5	1012	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.01980390271856	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACTTATTTCCCTTC	-3	True	NA	0	True	AATAAA	-21	NA	46863442	46857871	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46858273_46858383_46858462_46859474_46859649_46860675_46860826_46860959_46860988_46863261
transcript_9659.known	chr1	-	1922	11	FSM	ENSG00000143416.21	ENST00000463664.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	75.4035145069512	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAGGCACCAAGAAATA	9	False	NA	-81	True	NA	NA	NA	151372694	151364344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369555_151369712_151369770_151372637
transcript_96591.known	chr3	-	841	7	FSM	ENSG00000160799.12	ENST00000683445.1	841	7	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_2	29.8923996285938	2647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTGTCAGATATTTCC	2	True	NA	-1	True	AGTAAA	-16	NA	46976745	46921729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46922140_46922235_46922313_46923328_46923364_46923606_46923669_46925455_46925536_46940997_46941066_46976636
transcript_96592.known	chr3	-	402	6	FSM	ENSG00000160799.12	ENST00000605358.5	402	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	247.163589551536	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATGTGGCCAAGAAG	5495	False	NA	NA	False	NA	NA	NA	46976501	46922304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46922313_46923328_46923364_46923606_46923669_46925455_46925536_46940997_46941066_46976352
transcript_96596.nnic	chr3	+	1107	3	NNC	ENSG00000236409.2	novel	1585	3	NA	NA	-770	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGCTGGCTCTATCTGGC	8013	False	NA	NA	False	ATTAAA	-15	NA	47010053	47013465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_47010337_47012320_47012512_47012832
transcript_96597.nnic	chr3	+	1070	3	NNC	ENSG00000236409.2	novel	1585	3	NA	NA	-753	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGCTGGCTCTATCTGGC	8030	False	NA	NA	False	ATTAAA	-15	NA	47010070	47013465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_47010317_47012320_47012512_47012832
transcript_96598.known	chr3	-	8541	21	FSM	ENSG00000181555.22	ENST00000409792.4	8541	21	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_20	31.1289254552739	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATGTGTGTTCCCTA	-10	True	NA	-28	True	AATAAA	-14	NA	47164113	47016435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47017255_47017637_47017740_47019759_47019841_47037665_47037778_47042560_47042701_47046486_47046622_47056820_47057491_47062162_47062347_47067069_47067119_47083719_47084383_47086194_47086315_47088112_47088248_47097954_47098082_47101457_47101556_47103345_47103424_47105996_47106121_47113875_47114005_47116622_47116755_47120181_47124549_47126647_47126664_47163853
transcript_9660.known	chr1	-	1530	11	FSM	ENSG00000143416.21	ENST00000447402.7	1530	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	73.4495745392715	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGCCTTGTCTTTGGGG	3	True	NA	-41	True	AATAAA	-19	NA	151372700	151364304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369441_151369555_151369712_151369770_151372637
transcript_96600.known	chr3	+	4622	10	FSM	ENSG00000114648.12	ENST00000232766.6	4622	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	11.8613387956289	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTTCTTGGTT	-2	True	NA	17	True	AATAAA	-17	NA	47282943	47346816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_96602.known	chr3	+	3206	7	FSM	ENSG00000114648.12	ENST00000461084.5	3206	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	13.208793367383	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAAGGTAGCA	0	True	NA	NA	False	NA	NA	NA	47282945	47338822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534
transcript_96609.nic	chr3	-	912	4	ISM	ENSG00000088727.14	ENST00000452770.6	2707	22	-222	46576	0	0	5prime_fragment	FALSE	canonical	3	9	junction_3	48.1456124688429	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	-16	True	NA	-5	True	AATAAA	-22	NA	47282799	47275227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_47275491_47277281_47277380_47282139_47282386_47282494
transcript_9661.known	chr1	-	2128	10	FSM	ENSG00000143416.21	ENST00000470345.5	2128	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	79.4552440212044	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGATGGCCTTGTCTTT	-3	True	NA	-45	True	AATAAA	-15	NA	151372706	151364308	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
transcript_96613.known	chr3	-	740	3	FSM	ENSG00000088727.14	ENST00000425853.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	49.5	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	265	False	NA	-5	True	AATAAA	-22	NA	47282518	47275227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47275491_47277281_47277380_47282139
transcript_96615.known	chr3	+	375	2	FSM	ENSG00000114648.12	ENST00000483201.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	13	False	NA	23	True	AGTAAA	-16	NA	47282958	47287458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47283095_47287219
transcript_96617.known	chr3	-	633	3	FSM	ENSG00000088727.14	ENST00000432493.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	8.5	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	17	True	NA	-5	True	AATAAA	-22	NA	47282766	47275227	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47275491_47277281_47277380_47282494
transcript_96618.known	chr3	+	2249	9	FSM	ENSG00000114648.12	ENST00000442272.1	2249	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.6419163988725	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGGAGAACAGAAGGGAAAA	1	True	NA	NA	False	NA	NA	NA	47282946	47344577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47283095_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_9662.nnic	chr1	-	1451	10	NIC	ENSG00000143416.21	novel	1722	12	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_8	61.7485942260137	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	NA	False	NA	-40	True	AATAAA	-20	NA	151372733	151364303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369712_151369770_151372637
transcript_96620.known	chr3	+	260	2	FSM	ENSG00000076201.16	ENST00000462998.1	260	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGCATGGTGGCTCAA	36	True	NA	NA	False	GATAAA	-12	NA	47381069	47396291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47381181_47396142
transcript_96628.nic	chr3	-	1271	2	ISM	ENSG00000114650.21	ENST00000416208.5	1222	7	75	22500	75	-6889	5prime_fragment	FALSE	canonical	3	413	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGAAAGATGAA	24	True	NA	NA	False	NA	NA	NA	47475862	47441884	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_47443092_47475798
transcript_96638.nic	chr3	-	1590	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_6	78.1487186217549	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	292	False	NA	-1	True	AATAAA	-19	NA	47513405	47495639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47512991
transcript_96641.known	chr3	-	880	7	FSM	ENSG00000163832.16	ENST00000439305.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	83.5871135735381	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGTGGAAGATAGAGCAA	284	False	NA	NA	False	NA	NA	NA	47513413	47496028	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513320
transcript_96662.known	chr3	-	557	5	FSM	ENSG00000163832.16	ENST00000414236.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	99.9008883844383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGGCGGTGGCTGTGCT	-7	True	NA	NA	False	NA	NA	NA	47513342	47501715	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
transcript_96671.known	chr3	-	487	3	FSM	ENSG00000163832.16	ENST00000494161.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	121	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCATGGAACTGCCTTC	-5	True	NA	NA	False	ACTAAA	-2	NA	47513702	47501649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47501852_47504329_47504449_47513536
transcript_96675.known	chr3	-	1352	7	FSM	ENSG00000163832.16	ENST00000296149.9	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	35.7024742373224	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-15	True	NA	-1	True	AATAAA	-19	NA	47513712	47495639	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_96676.known	chr3	-	1277	6	FSM	ENSG00000163832.16	ENST00000442215.6	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	86.2429127522952	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCCTGTGGGTTGTCTT	-12	True	NA	-2	True	AATAAA	-18	NA	47513709	47495640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47513536
transcript_96680.known	chr3	-	6354	28	FSM	ENSG00000173473.11	ENST00000254480.10	6354	28	0	0	0	0	multi-exon	FALSE	canonical	3	1370	junction_8	88.7732581244188	1010	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTGTGAATTATTTTT	-23	True	NA	71	True	TATAAA	-1	NA	47781893	47585268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47588307_47590660_47590838_47610065_47610328_47622206_47622342_47635189_47635345_47636021_47636137_47638724_47638781_47661293_47661456_47662333_47662593_47670657_47670718_47675474_47675589_47676628_47676783_47678197_47678312_47680436_47680509_47686048_47686171_47689386_47689425_47693240_47693301_47701277_47701403_47706408_47706531_47710682_47710809_47714414_47714491_47720665_47720736_47729024_47729095_47736033_47736127_47738028_47738111_47745907_47745994_47772816_47772937_47781602
transcript_96684.known	chr3	+	3887	23	FSM	ENSG00000132153.15	ENST00000395745.6	3887	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	215.484295030888	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGTCCACTAGGG	-25	True	NA	24	True	AATAAA	-20	NA	47803133	47850192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_96685.known	chr3	+	3855	22	FSM	ENSG00000132153.15	ENST00000445061.6	3855	22	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	152.745842879624	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCTGTCCACTAGGGG	-21	True	NA	25	True	AATAAA	-21	NA	47803137	47850193	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_96687.known	chr3	+	1957	9	FSM	ENSG00000132153.15	ENST00000441384.5	1957	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	287.017856587356	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGTGTGGCGTTTCCTT	-21	True	NA	3	True	AATAAA	-17	NA	47803137	47842679	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47827346_47827478_47829023_47829135_47840876_47841179_47841616
transcript_9669.nnic	chr1	-	1272	9	NIC	ENSG00000143416.21	novel	1722	12	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_5	93.4317933039926	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	NA	False	NA	-40	True	AATAAA	-20	NA	151372733	151364303	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366721_151366905_151368198_151368320_151369712_151369770_151372637
transcript_96691.known	chr3	+	752	6	FSM	ENSG00000132153.15	ENST00000476446.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	294.902695816773	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTAGTCCATTTTCAT	-8	True	NA	NA	False	AATAAA	-18	NA	47802949	47822310	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47822096
transcript_96698.nnic	chr3	+	534	4	NNC	ENSG00000132153.15	novel	1464	4	NA	NA	-3	-792	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	250.735362927175	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTATAATATTATAAGAG	-28	True	NA	98	True	AATAAA	-16	NA	47803130	47816180	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_47803213_47805325_47805421_47810572_47810712_47815962
transcript_96699.known	chr3	+	1464	4	FSM	ENSG00000132153.15	ENST00000472718.5	1464	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	112.07834561393	2138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTTCAGCTCCT	3	False	NA	47	True	NA	NA	NA	47802908	47816972	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47815962
transcript_967.nic	chr1	-	1169	4	NIC	ENSG00000162585.17	novel	3576	8	NA	NA	627	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	661.860005338491	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	NA	False	NA	-14	True	ATTAAA	-40	NA	2199280	2189547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_2189782_2193638_2193911_2198006_2198143_2198753
transcript_96704.known	chr3	-	5142	19	FSM	ENSG00000047849.22	ENST00000360240.10	5142	19	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_6	75.3862686845081	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGCCGGCACCCACAC	-14	True	NA	NA	False	GATAAA	-44	NA	48089272	47851867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_96714.nnic	chr3	-	1258	6	NIC	ENSG00000047849.22	novel	5142	19	NA	NA	-104	170	combination_of_known_splicesites	FALSE	canonical	3	32	junction_4	159.18919561327	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAGAGGGCATCTCCT	313	False	NA	NA	False	AAGAAA	-10	NA	48088945	47916691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47998637_47998880_48088772
transcript_96715.known	chr3	-	899	6	FSM	ENSG00000047849.22	ENST00000423088.5	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	177.356815487875	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCACAGAAACAGATGTAT	4	True	NA	NA	False	AAAAAG	-29	NA	48088801	47916861	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47917175_47918718_47918842_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_96720.nic	chr3	-	2556	3	ISM	ENSG00000047849.22	ENST00000439356.2	2743	4	-121	2707	-104	2136	5prime_fragment	FALSE	canonical	3	438	junction_2	30.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACTTTACTGAAAATATG	313	False	NA	NA	False	NA	NA	NA	48088945	47975792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_47977934_47998637_47998880_48088772
transcript_96721.known	chr3	-	547	1	FSM	ENSG00000236768.1	ENST00000444020.1	547	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAATTCAGCATTA	41	False	NA	NA	False	AAAAAG	-40	NA	48121215	48120668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48120700_48121200
transcript_96722.known	chr3	-	3844	15	FSM	ENSG00000164045.12	ENST00000302506.8	3844	15	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_11	42.2360350063926	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	-18	True	NA	28	True	NA	NA	NA	48188417	48157145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48180720_48180841_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_96724.known	chr3	-	3663	14	FSM	ENSG00000164045.12	ENST00000351231.7	3663	14	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	85.6249562691548	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTACATTTCCCTTTAAG	43	False	NA	28	True	NA	NA	NA	48188356	48157145	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48159086_48159343_48159456_48164306_48164438_48165635_48165735_48165830_48165894_48167845_48167945_48174283_48174458_48177370_48177443_48177853_48177989_48182928_48183031_48183799_48183837_48184652_48184696_48186702_48186780_48187777
transcript_96726.known	chr3	+	180	1	FSM	ENSG00000231884.1	ENST00000435191.1	180	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGGCTGAATTATAGAA	36	False	NA	NA	False	AATAAA	-19	NA	48181546	48181726	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48181500_48181700
transcript_96729.known	chr3	-	1353	7	FSM	ENSG00000172113.10	ENST00000452211.5	1353	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	70.3027184554212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTAATTGACTTGCC	278	False	NA	-113	True	AAAAAG	-3	NA	48301305	48294082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300430_48300635_48301278
transcript_96731.known	chr3	-	913	7	FSM	ENSG00000172113.10	ENST00000415053.5	913	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	69.850833129526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGGTGGTTCAGAAGAA	258	False	NA	NA	False	NA	NA	NA	48301325	48294446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48300526_48300635_48301278
transcript_96742.known	chr3	-	613	6	FSM	ENSG00000172113.10	ENST00000425930.5	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	59.5294884909992	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATGTAGCTGGAACAGG	22	True	NA	NA	False	NA	NA	NA	48301353	48294675	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301269
transcript_96743.known	chr3	-	2004	6	FSM	ENSG00000172113.10	ENST00000421967.5	2004	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	42.5064700957395	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCTATCTGAAAGCATCA	17	True	NA	NA	False	TATAAA	-3	NA	48301358	48293263	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301295
transcript_96744.known	chr3	-	2903	6	FSM	ENSG00000172113.10	ENST00000442597.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	39.3212410790911	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAGTGTGAACTCGTG	8	True	NA	-3	True	AATAAA	-21	NA	48301367	48292316	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301352
transcript_96747.known	chr3	-	794	6	FSM	ENSG00000172113.10	ENST00000418431.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	63.0542623460143	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTGCCTGAGGGCCTA	-12	True	NA	NA	False	NA	NA	NA	48301387	48294523	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296237_48296726_48296830_48298426_48298524_48301352
transcript_9675.known	chr1	+	918	7	FSM	ENSG00000159377.11	ENST00000290541.7	918	7	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_6	93.8499097258786	10614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	4	True	NA	14	True	AATAAA	-14	NA	151399572	151401937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151399728_151399980_151400188_151400441_151400589_151400763_151400846_151401238_151401356_151401541_151401631_151401816
transcript_96758.known	chr3	+	917	5	FSM	ENSG00000164048.14	ENST00000440261.6	917	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	186.963064534148	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATTTGGAACATGGA	0	True	NA	NA	False	NA	NA	NA	48241105	48286630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267917_48268161_48286245
transcript_9676.known	chr1	+	755	5	FSM	ENSG00000159377.11	ENST00000474100.1	755	5	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_4	108.379829765506	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGAGTGGTTTTTGTC	605	False	NA	13	True	AATAAA	-13	NA	151400173	151401936	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151400188_151400441_151400589_151400763_151400846_151401238_151401631_151401816
transcript_96766.known	chr3	-	599	5	FSM	ENSG00000172113.10	ENST00000435684.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	68.5870796870664	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGACCAGCCTGATG	8	True	NA	NA	False	NA	NA	NA	48301367	48294654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301278
transcript_96768.known	chr3	-	4776	5	FSM	ENSG00000172113.10	ENST00000451657.6	4776	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	63.8807482736388	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTCTGTTCAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48301685	48290721	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301352
transcript_9677.known	chr1	+	665	3	FSM	ENSG00000159377.11	ENST00000466425.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	1399	junction_2	115	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	1332	False	NA	14	True	AATAAA	-14	NA	151400900	151401937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151401356_151401541_151401631_151401816
transcript_96777.known	chr3	+	3367	4	FSM	ENSG00000164048.14	ENST00000354698.8	3367	4	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_3	62.4517591603489	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	-2	True	NA	-26	True	AATGAA	-38	NA	48241103	48270990	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267914
transcript_9678.known	chr1	+	1650	4	FSM	ENSG00000159377.11	ENST00000493673.1	1650	4	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_2	755.683061136671	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTGAGTGGTTTTTG	21	False	NA	11	True	AATAAA	-11	NA	151399589	151401934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151399728_151399980_151400186_151400441_151401356_151401541
transcript_96780.nnic	chr3	+	482	4	NNC	ENSG00000164048.14	novel	1677	4	NA	NA	-70	-5576	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	202.046749265829	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGAGTCTATATTGTT	NA	False	NA	3	True	ATTAAA	-18	NA	48241029	48281054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_48241215_48247624_48247678_48260812_48260940_48280937
transcript_96782.known	chr3	+	1677	4	FSM	ENSG00000164048.14	ENST00000427617.6	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	185.167191718428	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	-6	True	NA	NA	False	AATAAA	-26	NA	48241099	48287627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48286245
transcript_96785.known	chr3	+	593	4	FSM	ENSG00000164048.14	ENST00000412564.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	181.418484908971	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATCTTTGTATTCCTA	-5	True	NA	28	True	AATAAA	-19	NA	48241100	48299253	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48298954
transcript_96798.known	chr3	-	866	3	FSM	ENSG00000172113.10	ENST00000444069.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	72	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTGCAGTGAGCCGAGAT	37	True	NA	NA	False	NA	NA	NA	48301338	48294158	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48301278
transcript_96799.known	chr3	-	2254	3	FSM	ENSG00000172113.10	ENST00000643011.1	2254	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	72.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGAGTTCCAGACCA	8	True	NA	NA	False	NA	NA	NA	48301367	48292782	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48301295
transcript_968.known	chr1	-	1544	4	FSM	ENSG00000162585.17	ENST00000420515.1	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	481.312788111847	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACATTTTGTGCATTT	-5	True	NA	0	True	NA	NA	NA	2194748	2191900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2192976_2193638_2193911_2193997_2194134_2194687
transcript_9680.known	chr1	-	2741	7	FSM	ENSG00000143442.22	ENST00000485040.5	2741	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_6	13.3510299228187	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGAAAGTAGGCAAAGGA	3	True	NA	NA	False	NA	NA	NA	151459179	151426188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_96800.known	chr3	-	939	3	FSM	ENSG00000172113.10	ENST00000642710.1	939	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	73	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTAATTGACTTGCC	-34	True	NA	-113	True	AAAAAG	-3	NA	48301409	48294082	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48301352
transcript_96804.known	chr3	-	1209	5	FSM	ENSG00000172113.10	ENST00000426689.6	1209	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	21.2955394390469	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTATGCTGCCACAT	3059	False	NA	-27	True	AATAAA	-17	NA	48298524	48293996	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426
transcript_96814.known	chr3	-	1461	4	FSM	ENSG00000164051.14	ENST00000447018.5	1461	4	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_3	55.7992433242204	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	-16	True	NA	4	True	ATTAAA	-35	NA	48440081	48432163	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48439987
transcript_96815.known	chr3	-	1385	4	FSM	ENSG00000164051.14	ENST00000412398.6	1385	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	97.5329004319397	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGAGTTTTTTTCAT	11	True	NA	-2	True	ATTAAA	-29	NA	48440119	48432169	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48440095
transcript_96817.known	chr3	-	1611	4	FSM	ENSG00000164051.14	ENST00000395694.7	1611	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	67.8347665696253	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGACTGAGTTTTTTT	11	True	NA	-5	True	ATTAAA	-26	NA	48440119	48432172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435137_48439987
transcript_96825.known	chr3	+	561	4	FSM	ENSG00000232112.3	ENST00000438607.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_1	2540.30868640451	42142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGTTCTTGTGTGGTTGT	-2	True	NA	19	True	ATTAAA	-19	NA	48440256	48444208	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48440313_48440402_48440459_48440540_48440629_48443847
transcript_96826.known	chr3	+	619	3	FSM	ENSG00000232112.3	ENST00000477624.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	16226	junction_1	771.5	8500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	6	False	NA	14	True	ATTAAA	-14	NA	48440283	48444203	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48440459_48440540_48440629_48443847
transcript_96827.known	chr3	-	1554	4	FSM	ENSG00000164051.14	ENST00000442740.1	1554	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	100.982946855177	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGTTTTATTATTTAA	30	False	48440130	-27	True	ATTAAA	-4	NA	48440100	48432194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48433167_48433706_48433977_48434816_48435016_48439987
transcript_96829.nic	chr3	+	2324	13	NIC	ENSG00000164053.22	novel	2376	14	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	29.7988627672638	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGTTTCCTGAGTC	6399	False	NA	22	True	ATTAAA	-34	NA	48446705	48465655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_48446800_48450036_48450171_48451728_48451900_48454299_48454419_48457258_48457417_48459358_48459455_48459786_48459917_48460109_48460800_48463744_48463882_48464040_48464133_48464581_48464663_48464830_48465084_48465486
transcript_96832.known	chr3	+	1105	4	FSM	ENSG00000213689.14	ENST00000433541.1	1105	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.78423336480244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	254	False	NA	4	True	AATAAA	-19	NA	48465810	48467645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48465939_48466250_48466310_48466629_48466642_48466739
transcript_96833.nic	chr3	+	1241	3	ISM	ENSG00000213689.14	ENST00000433541.1	1105	4	-38	0	-38	0	intron_retention	FALSE	canonical	2	3	junction_1	4.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	216	False	NA	4	True	AATAAA	-19	NA	48465772	48467645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_48465939_48466250_48466310_48466629
transcript_96836.known	chr3	+	1096	2	FSM	ENSG00000213689.14	ENST00000625293.3	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	-27	True	NA	4	True	AATAAA	-19	NA	48466229	48467645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48466310_48466629
transcript_96837.known	chr3	+	629	2	FSM	ENSG00000213689.14	ENST00000456089.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	5	True	NA	4	True	AATAAA	-19	NA	48466261	48467645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48466310_48467064
transcript_96838.known	chr3	+	924	2	FSM	ENSG00000213689.14	ENST00000492235.2	924	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCACTGAGTGGTCAATTG	-5	True	NA	2	True	AATAAA	-17	NA	48466251	48467643	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48466310_48466777
transcript_9684.known	chr1	-	649	4	FSM	ENSG00000143442.22	ENST00000467287.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	40.2326567189723	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCACCCTTCATCAAGTA	-5	True	NA	NA	False	NA	NA	NA	151459187	151429399	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151429712_151430665_151430842_151442080_151442206_151459151
transcript_96842.known	chr3	-	2034	6	FSM	ENSG00000164054.17	ENST00000296444.7	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	851	junction_4	522.054173434137	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-28	True	NA	-29	True	AATAAA	-15	NA	48504174	48467875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
transcript_96843.known	chr3	-	2250	6	FSM	ENSG00000164054.17	ENST00000442747.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	742.038974717636	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-4	True	NA	-30	True	AATAAA	-14	NA	48504795	48467876	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504422
transcript_96844.known	chr3	-	2081	6	FSM	ENSG00000164054.17	ENST00000444115.5	2081	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	743.865417935261	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTTCTTCCTGGCCT	11	False	NA	-23	True	AATAAA	-21	NA	48504826	48467869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504629
transcript_96849.known	chr3	-	1739	4	FSM	ENSG00000164054.17	ENST00000465449.5	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	904.71026669684	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	5992	False	NA	-29	True	AATAAA	-15	NA	48473532	48467875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473433
transcript_9685.known	chr1	+	5101	21	FSM	ENSG00000143375.15	ENST00000271636.12	5101	21	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_11	56.2222375933224	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTGTCTTCTCAT	-1	True	NA	28	True	ATTAAA	-28	NA	151511386	151538692	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151511516_151518505_151519393_151520165_151520267_151520413_151520484_151520595_151520692_151523433_151523562_151524225_151524359_151524673_151524887_151525641_151525791_151526974_151527108_151529349_151529560_151529908_151530116_151530488_151530747_151532401_151532573_151533974_151534137_151535041_151535132_151535599_151535684_151535779_151535899_151536236_151536346_151536729_151536894_151537204
transcript_96850.known	chr3	-	1839	4	FSM	ENSG00000164054.17	ENST00000426002.5	1839	4	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	341.440412891555	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	6316	False	NA	-29	True	AATAAA	-15	NA	48473208	48467875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473009
transcript_96851.known	chr3	-	673	3	FSM	ENSG00000164054.17	ENST00000466424.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	930.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	9679	False	NA	-29	True	AATAAA	-15	NA	48469845	48467875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48468218_48469360_48469574_48469727
transcript_96852.known	chr3	-	1908	3	FSM	ENSG00000164054.17	ENST00000494854.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_2	376	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-9	True	NA	-29	True	AATAAA	-15	NA	48473103	48467875	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469574_48469727_48469844_48473009
transcript_96853.known	chr3	-	1757	15	FSM	ENSG00000114268.12	ENST00000490115.5	1757	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	23.775308749256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGATAGTCACCATGCCA	9312	False	NA	NA	False	NA	NA	NA	48556923	48519673	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48548531_48548660_48549863_48549961_48550117_48550235_48556680
transcript_96855.known	chr3	-	3499	14	FSM	ENSG00000114268.12	ENST00000232375.8	3499	14	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_6	8.21673858044713	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTGTATTTGGTAG	-2	True	NA	-30	True	AATAAA	-18	NA	48556803	48517683	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
transcript_96862.known	chr3	-	778	6	FSM	ENSG00000010256.11	ENST00000412343.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	1291.73765138282	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGATGGAATCACTGAA	11	True	NA	NA	False	NA	NA	NA	48609636	48603562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609496
transcript_96864.known	chr3	-	1595	13	FSM	ENSG00000010256.11	ENST00000203407.6	1595	13	0	0	0	0	multi-exon	FALSE	canonical	3	2917	junction_12	172.385710931426	3597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATCCCTCTTTTGG	1	True	NA	-14	True	AATAAA	-16	NA	48609646	48599001	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609551
transcript_96865.known	chr3	-	2630	21	FSM	ENSG00000225697.13	ENST00000420764.6	2630	21	0	0	0	0	multi-exon	FALSE	canonical	2	116	junction_5	42.8460908368546	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-28	True	NA	-5	True	AATAAA	-16	NA	48635483	48625722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_96867.known	chr3	-	2611	21	FSM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	0	0	0	multi-exon	FALSE	canonical	2	97	junction_4	46.0480998522197	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-6	True	NA	-5	True	AATAAA	-16	NA	48635461	48625722	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_9687.known	chr1	+	3033	12	FSM	ENSG00000143367.17	ENST00000368848.6	3033	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_9	13.7034712378631	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	0	True	NA	27	True	AATAAA	-23	NA	151540307	151583583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151540427_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_96876.nnic	chr3	+	442	4	NNC	ENSG00000228350.1	novel	196	3	NA	NA	-897	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2.16024689946929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGATGGGGGTCT	6128	False	NA	NA	False	ATTAAA	-24	NA	48662878	48669174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_48663047_48663697_48663814_48665640_48665723_48669098
transcript_96878.nnic	chr3	+	411	3	NNC	ENSG00000228350.1	novel	196	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGATGGGGGTCT	7015	False	NA	NA	False	ATTAAA	-24	NA	48663765	48669174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_48664019_48665640_48665723_48669098
transcript_96879.known	chr3	+	196	3	FSM	ENSG00000228350.1	ENST00000421275.1	196	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGATGGGGGTCT	7025	False	NA	NA	False	ATTAAA	-24	NA	48663775	48669174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48663814_48665640_48665723_48669098
transcript_9690.known	chr1	+	495	1	FSM	ENSG00000223861.1	ENST00000452587.1	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAGAGGATTATTTTG	NA	False	NA	NA	False	NA	NA	NA	151557445	151557940	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151557400_151557900
transcript_96900.known	chr3	-	1746	6	FSM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_5	17.8728844901991	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-16	True	NA	-3	True	AATACA	-20	NA	48717221	48688002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695422_48717156
transcript_96901.known	chr3	-	1185	3	FSM	ENSG00000068745.15	ENST00000340879.8	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	103.5	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-11	True	NA	0	True	AATAAA	-21	NA	48717216	48693447	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48694241_48695089_48695422_48717156
transcript_96902.known	chr3	-	1260	4	FSM	ENSG00000068745.15	ENST00000416707.1	1260	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	78.6652542246081	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	2	True	NA	-40	True	TATAAA	-34	NA	48717203	48693487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48694241_48694693_48694825_48695089_48695419_48717156
transcript_96903.known	chr3	-	1309	4	FSM	ENSG00000068745.15	ENST00000432678.6	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	154.615652506465	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTCTTGTAATTC	NA	False	NA	-5	True	AATAAA	-16	NA	48717278	48693452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48694241_48694458_48694526_48695089_48695422_48717156
transcript_96904.known	chr3	-	2174	3	FSM	ENSG00000068745.15	ENST00000431721.6	2174	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAATGTTTTCAGTCTTT	-11	True	NA	-73	True	ATTAAA	-20	NA	48717216	48693520	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48695422_48715314_48715528_48717156
transcript_96905.known	chr3	-	1673	2	FSM	ENSG00000068745.15	ENST00000449610.5	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATTTTATAAGAACAAA	13	True	NA	29	True	AATAAA	-2	NA	48717192	48693784	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48695422_48717156
transcript_96908.known	chr3	-	1778	9	FSM	ENSG00000178537.10	ENST00000319017.5	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	5.88960949469487	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTATATTTTCTT	-3	True	NA	-2	True	AATAAA	-25	NA	48898882	48856925	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48857773_48858506_48858632_48859091_48859202_48859554_48859628_48862541_48862660_48879357_48879449_48883996_48884125_48891979_48892073_48898689
transcript_9691.known	chr1	+	3107	13	FSM	ENSG00000143367.17	ENST00000368849.8	3107	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.9844211360174	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	1	True	NA	27	True	AATAAA	-23	NA	151540308	151583583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151540427_151562090_151562166_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_96911.known	chr3	+	2278	17	FSM	ENSG00000177479.20	ENST00000449376.5	2278	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	165.665219173338	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	-21	True	NA	-56	True	NA	NA	NA	48918835	48983620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_96914.known	chr3	+	4912	16	FSM	ENSG00000177479.20	ENST00000356401.9	4912	16	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	86.4256649124296	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATGATCTCTGCTCA	-15	True	NA	NA	False	NA	NA	NA	48918841	48986382	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48918999_48922747_48922812_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_96920.known	chr3	+	1771	9	FSM	ENSG00000178467.18	ENST00000383729.9	1771	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	14.9979165219706	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCGATAGGTGCAGCGG	2	True	NA	65	True	NA	NA	NA	48990240	49007153	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005047_49005776_49005868_49006063_49006188_49006686
transcript_96923.known	chr3	+	4070	6	FSM	ENSG00000178252.19	ENST00000608424.6	4070	6	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_1	47.2330392839589	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTCTATGCCTCA	4	True	NA	13	True	AATAAA	-18	NA	49007390	49015951	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49007532_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_96925.known	chr3	+	1883	6	FSM	ENSG00000178252.19	ENST00000415265.6	1883	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	242.24813724774	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCTGAAGGTGAGTGGAG	9	True	NA	-69	True	NA	NA	NA	49007395	49015425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49007532_49013290_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_96929.known	chr3	+	3565	5	FSM	ENSG00000178252.19	ENST00000471162.5	3565	5	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_1	46.1864428160472	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCAGCATGCCTTGA	16	True	NA	NA	False	NA	NA	NA	49007402	49015365	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49007532_49011634_49014294_49014382_49014500_49014599_49014719_49014824
transcript_96933.known	chr3	+	705	5	FSM	ENSG00000178057.15	ENST00000326912.8	705	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	207.292667501772	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTATCAGGTGTGTTG	-2	True	NA	19	True	NA	NA	NA	49020458	49023287	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49020571_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_96935.known	chr3	+	902	5	FSM	ENSG00000178057.15	ENST00000326925.11	902	5	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	48.602983447521	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTTTTTCTTTT	9	True	NA	NA	False	NA	NA	NA	49022120	49023495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49022222_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_96952.known	chr3	-	1042	1	FSM	ENSG00000221883.4	ENST00000647812.1	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTGGCTGGTCGCT	1078	False	NA	NA	False	AATAAA	-35	NA	48918823	48917781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48917800_48918800
transcript_96953.known	chr3	-	479	1	FSM	ENSG00000273211.1	ENST00000609473.1	479	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATTGCCTCAATTAACT	NA	False	NA	-2	True	AATAAA	-20	NA	48985963	48985484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48985500_48986000
transcript_96954.known	chr3	-	1748	12	FSM	ENSG00000178149.17	ENST00000341949.9	1748	12	0	0	0	0	multi-exon	TRUE	canonical	3	137	junction_11	29.7151768552232	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-5	True	NA	-13	True	AATAAA	-21	NA	49018580	49015487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_96955.known	chr3	-	654	5	FSM	ENSG00000178149.17	ENST00000438585.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	68.633082402002	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	4993	False	NA	-13	True	AATAAA	-21	NA	49016511	49015487	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49015708_49015818_49015873_49015972_49016087_49016157_49016341_49016428
transcript_96956.known	chr3	+	546	2	FSM	ENSG00000177479.20	ENST00000466850.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTACATTTACTTTGT	3904	False	NA	NA	False	NA	NA	NA	48922760	48927956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48922812_48927461
transcript_96959.known	chr3	-	1628	14	FSM	ENSG00000178035.13	ENST00000679117.1	1628	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	622.336768361341	5500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-13	True	NA	31	True	AATAAA	-18	NA	49029416	49024324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028766_49029252
transcript_96962.known	chr3	-	1651	14	FSM	ENSG00000178035.13	ENST00000326739.9	1651	14	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	273.715007490353	16259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	5	True	NA	31	True	AATAAA	-18	NA	49029398	49024324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_96963.known	chr3	-	1751	15	FSM	ENSG00000178035.13	ENST00000429182.6	1751	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	758.933976451341	4967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	9	True	NA	31	True	AATAAA	-18	NA	49029426	49024324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49025994_49026067_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_96964.known	chr3	-	1538	13	FSM	ENSG00000178035.13	ENST00000442157.2	1538	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	640.238215215417	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	3788	False	NA	13	True	NA	NA	NA	49029378	49024342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028430_49028533_49028757_49028807_49029252
transcript_96965.known	chr3	-	1657	14	FSM	ENSG00000178035.13	ENST00000677010.1	1657	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	783.00054032794	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	5	True	NA	13	True	NA	NA	NA	49029398	49024342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026598_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028721_49028807_49029252
transcript_96966.known	chr3	-	2078	13	FSM	ENSG00000178035.13	ENST00000678001.1	2078	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	284.876727726222	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	6	True	NA	13	True	NA	NA	NA	49029397	49024342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757
transcript_96967.known	chr3	-	1749	13	FSM	ENSG00000178035.13	ENST00000472328.2	1749	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	283.116142245546	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-13	True	NA	31	True	AATAAA	-18	NA	49029416	49024324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_96968.known	chr3	-	1743	13	FSM	ENSG00000178035.13	ENST00000678920.1	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	284.029879101165	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	3	True	NA	13	True	NA	NA	NA	49029400	49024342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028533_49028757_49028807_49029252
transcript_96969.known	chr3	-	2110	12	FSM	ENSG00000178035.13	ENST00000462980.2	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	296.577390844836	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAAGTGATGCCTGAT	9	True	NA	23	True	AATAAA	-10	NA	49029426	49024332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49028533_49028757_49028807_49029252
transcript_96970.known	chr3	-	1881	13	FSM	ENSG00000178035.13	ENST00000676607.1	1881	13	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_1	276.406051951754	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	14	True	NA	13	True	NA	NA	NA	49029421	49024342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028807_49029252
transcript_96976.known	chr3	-	2171	23	FSM	ENSG00000172053.18	ENST00000636018.1	2171	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	211.247964438332	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGCTAAATTCTCCTA	7394	False	NA	-25	True	NA	NA	NA	49104420	49095953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098975_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104372
transcript_96979.known	chr3	-	2449	24	FSM	ENSG00000172053.18	ENST00000306125.12	2449	24	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_23	69.8832675073563	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	-4	True	NA	-3	True	AATAAA	-22	NA	49104757	49095931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_96980.known	chr3	-	859	8	FSM	ENSG00000172053.18	ENST00000453392.5	859	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	250.490620623624	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	5503	False	NA	-3	True	AATAAA	-22	NA	49099595	49095931	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509
transcript_96981.known	chr3	-	2362	23	FSM	ENSG00000172053.18	ENST00000464962.6	2362	23	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_18	64.6352768096839	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGAGTCTGTGTGTTAT	-33	True	NA	-10	True	AATAAA	-15	NA	49104532	49095938	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
transcript_96982.known	chr3	-	386	3	FSM	ENSG00000172053.18	ENST00000497635.5	386	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	333.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	6574	False	NA	-4	True	AATAAA	-21	NA	49098524	49095932	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49098191_49098259_49098352
transcript_96983.known	chr3	-	1044	11	FSM	ENSG00000172053.18	ENST00000452739.5	1044	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	197.348828220489	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGCGTTTTGATGA	-7	True	NA	NA	False	NA	NA	NA	49104760	49100659	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49104099_49104323_49104472_49104616
transcript_96984.known	chr3	-	553	5	FSM	ENSG00000172053.18	ENST00000634609.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_4	50.8840593899504	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGCTGAAGCTGGCAA	-5	True	NA	NA	False	AATGAA	-25	NA	49104758	49103332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_96986.known	chr3	-	4706	27	FSM	ENSG00000172046.20	ENST00000417901.6	4721	27	15	0	-1	0	multi-exon	FALSE	canonical	3	182	junction_17	42.4093359432558	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	-1	True	NA	-20	True	AATAAA	-16	NA	49120808	49108049	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_96987.known	chr3	-	5674	33	FSM	ENSG00000172037.14	ENST00000418109.5	5674	33	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_32	45.3114224009796	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	NA	False	NA	-1	True	AATAAA	-17	NA	49133118	49121113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703_49123053_49123131_49123374_49123446_49123632_49123727_49124101_49124189_49124287_49124394_49124613_49124700_49124926_49125005_49125170_49125252_49125485_49125746_49125891_49125966_49126160_49126364_49126498_49128457_49128586_49128660_49128820_49129019_49129153_49129244_49129325_49129603_49129717_49129838_49130019_49130230_49130420_49130739_49130861_49130949_49131153_49131378_49131443_49131534_49131724_49132115_49132190_49132269_49132406_49132490_49132664_49132791_49132869_49132954
transcript_96988.nic	chr3	-	1227	6	ISM	ENSG00000172037.14	ENST00000305544.9	5692	32	10056	0	-396	0	3prime_fragment	FALSE	canonical	3	209	junction_5	29.9292499070725	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	10034	False	NA	-1	True	AATAAA	-17	NA	49122994	49121113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703
transcript_96990.known	chr3	-	412	2	FSM	ENSG00000172037.14	ENST00000484713.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTGTCTGGACTCTG	NA	False	NA	-2	True	AATAAA	-16	NA	49121596	49121114	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49121363_49121432
transcript_96991.known	chr3	-	689	3	FSM	ENSG00000172037.14	ENST00000467506.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	9644	False	NA	-1	True	AATAAA	-17	NA	49121976	49121113	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49121593_49121683_49121861_49121943
transcript_96992.known	chr3	-	1791	2	FSM	ENSG00000177352.10	ENST00000321895.7	1791	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAGTCTCCCTGCCCA	3	True	NA	NA	False	NA	NA	NA	49166331	49162534	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49164261_49166266
transcript_96996.nic	chr3	+	1666	6	NIC	ENSG00000185909.15	novel	1972	6	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	32.0649341181297	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	NA	False	NA	25	True	AGTAAA	-18	NA	49171559	49176486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_49171686_49172635_49172802_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_96998.known	chr3	+	1972	6	FSM	ENSG00000185909.15	ENST00000332780.4	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	7.52595508889071	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	-13	True	NA	25	True	AGTAAA	-18	NA	49171597	49176486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49171686_49172635_49173146_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_9700.known	chr1	+	669	5	FSM	ENSG00000178796.13	ENST00000479191.2	669	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.08972473588517	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGCTGTGGTTTTGTTT	-3	True	NA	NA	False	NA	NA	NA	151721521	151729805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151721621_151722085_151722163_151727574_151727622_151728765_151728894_151729487
transcript_97004.nnic	chr3	+	1683	4	NIC	ENSG00000185909.15	novel	1972	6	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	32.6904675198546	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	NA	False	NA	25	True	AGTAAA	-18	NA	49171559	49176486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_49171686_49172635_49173146_49174238_49174404_49175604
transcript_97006.known	chr3	-	4070	22	FSM	ENSG00000114316.13	ENST00000265560.9	4070	22	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_16	33.2917427608472	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTAGGGCCAGCGGCCT	-16	True	NA	NA	False	NA	NA	NA	49340053	49277143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_97009.known	chr3	-	3222	21	FSM	ENSG00000114316.13	ENST00000351842.8	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_15	32.0019921254912	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCACTGATATGGGTT	4	True	NA	-38	True	AGTAAA	-17	NA	49340033	49277830	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_97014.known	chr3	-	1454	7	FSM	ENSG00000114316.13	ENST00000415188.1	1454	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	80.5655357802302	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCATCCCAGAACCCAAA	1	True	NA	NA	False	NA	NA	NA	49340036	49316731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49317479_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_97015.nnic	chr3	-	946	7	NNC	ENSG00000114316.13	novel	821	6	NA	NA	-46	1146	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	84.6148135178863	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGCTCATCTTCACC	5067	False	NA	NA	False	AATAAA	-17	NA	49340099	49323550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_49323727_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_97019.nic	chr3	-	1479	6	ISM	ENSG00000114316.13	ENST00000415188.1	1454	7	-63	7261	-46	704	5prime_fragment	FALSE	canonical	3	213	junction_1	14.1081536708387	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATAGCTTGATTCTACCT	5067	False	NA	NA	False	AAAACA	-15	NA	49340099	49323992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_9702.known	chr1	-	2444	14	FSM	ENSG00000159409.15	ENST00000420342.1	2444	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.63902121174327	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTAAAAGCATCAAATAAG	-2	True	NA	NA	False	AATAAA	-8	NA	151716798	151702414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151703449_151705030_151705169_151705821_151705966_151706223_151706362_151706668_151706735_151707144_151707295_151707506_151707649_151707791_151707936_151708997_151709078_151709219_151709346_151709742_151709792_151714593_151714677_151715875_151715982_151716754
transcript_97020.known	chr3	-	821	6	FSM	ENSG00000114316.13	ENST00000491791.1	821	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	88.0259052779351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTGAATTTTTTCTC	4454	False	NA	NA	False	AATGAA	-34	NA	49340712	49324703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49340483
transcript_97022.nic	chr3	-	1599	5	NIC	ENSG00000114316.13	novel	1536	7	NA	NA	-46	694	intron_retention	FALSE	canonical	3	217	junction_2	13.8811923119017	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAAAAAAAGTGATAGCTT	5067	False	NA	NA	False	AAAACA	-5	NA	49340099	49324002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_97027.known	chr3	-	589	2	FSM	ENSG00000233276.8	ENST00000646881.2	589	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACGCAGGTACAGCCGC	3	True	NA	NA	False	NA	NA	NA	49358325	49357476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357767_49358026
transcript_97028.known	chr3	-	580	2	FSM	ENSG00000233276.8	ENST00000496791.2	580	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGCCAGCTCCCAGCG	3	True	NA	NA	False	NA	NA	NA	49358325	49357607	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357889_49358026
transcript_97029.known	chr3	-	708	2	FSM	ENSG00000233276.8	ENST00000643797.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCCGGGTGTCAG	3	True	NA	-39	True	NA	NA	NA	49358325	49357200	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357748_49358164
transcript_9703.known	chr1	-	2318	14	FSM	ENSG00000182134.17	ENST00000368827.10	2318	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	69.448972370465	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTCTTTCTGAACTAG	-21	True	NA	NA	False	GATAAA	-15	NA	151790522	151771563	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151771987_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_97030.known	chr3	-	899	2	FSM	ENSG00000233276.8	ENST00000419783.3	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	2377	junction_1	0	10061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTATGTCCTGTGTC	10	True	NA	-14	True	AATAAA	-20	NA	49358353	49357175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357748_49358026
transcript_97034.known	chr3	-	1971	5	FSM	ENSG00000067560.14	ENST00000679208.1	1971	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1233.80042956712	2035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	448	False	NA	-10	True	AATAAA	-15	NA	49411645	49359144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411322
transcript_97038.known	chr3	+	2146	3	FSM	ENSG00000145022.5	ENST00000273590.4	1930	3	-217	1	-6	-1	multi-exon	TRUE	canonical	3	39	junction_2	0.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTTGTTGTGGTTATTC	-6	True	NA	20	True	ATTAAA	-12	NA	49412205	49416475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49412641_49413055_49413111_49414819
transcript_97040.known	chr3	+	1081	3	FSM	ENSG00000145022.5	ENST00000493381.1	1081	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCAGAGGTTGCAGTGAG	-8	True	NA	NA	False	NA	NA	NA	49412399	49415442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49412803_49413055_49413111_49414819
transcript_97042.known	chr3	-	1805	5	FSM	ENSG00000067560.14	ENST00000418115.6	1805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1076.37966698559	13016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-2	True	NA	-10	True	AATAAA	-15	NA	49411976	49359144	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_97043.known	chr3	-	1582	3	FSM	ENSG00000067560.14	ENST00000676712.2	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	846.5	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-26	True	NA	-5	True	AATAAA	-20	NA	49412000	49359139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49375433_49375592_49411819
transcript_97044.known	chr3	-	1641	4	FSM	ENSG00000067560.14	ENST00000454011.7	1641	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1135.62082873936	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	46	True	NA	-5	True	AATAAA	-20	NA	49411928	49359139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49362495_49362627_49375433_49375592_49411819
transcript_97045.known	chr3	-	1897	6	FSM	ENSG00000067560.14	ENST00000445425.6	1897	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1222.02510612507	2049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	6	True	NA	-5	True	AATAAA	-20	NA	49411968	49359139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49406711_49406807_49411819
transcript_97046.known	chr3	-	1944	6	FSM	ENSG00000067560.14	ENST00000422781.6	1944	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1186.04714914712	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCCTGTTGTTTGTGTTG	4	True	NA	-4	True	AATAAA	-21	NA	49411970	49359138	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49360927_49361067_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_97047.known	chr3	-	527	4	FSM	ENSG00000067560.14	ENST00000677684.1	527	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1099.88312510416	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGATCTGGGGCAGGACT	36	True	NA	NA	False	NA	NA	NA	49411938	49362495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49362627_49368427_49368543_49375429_49375592_49411819
transcript_97056.known	chr3	-	1827	9	FSM	ENSG00000145020.16	ENST00000636070.1	1827	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	218.123495696819	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCACTGAATCCTGAAAA	11	True	NA	-55	True	NA	NA	NA	49422451	49416825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49421981_49422050_49422360
transcript_97059.known	chr3	-	1620	8	FSM	ENSG00000145020.16	ENST00000636522.1	1620	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	179.665448735665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCCACATTCCCAAGT	-11	True	NA	NA	False	NA	NA	NA	49422473	49416986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422360
transcript_97083.known	chr3	-	1921	7	FSM	ENSG00000145029.14	ENST00000615713.4	1921	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	12.9486163997034	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGCTGGCTGCCTGTG	4	True	NA	-5	True	AATAAA	-15	NA	49429288	49422946	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49423506_49424161_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_97085.known	chr3	-	2040	7	FSM	ENSG00000145029.14	ENST00000423832.5	2040	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	12.9486163997034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGGCCTGGTATGCAGT	-16	True	NA	-51	True	NA	NA	NA	49429308	49422992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49423564_49424074_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_9709.known	chr1	-	2792	13	FSM	ENSG00000182134.17	ENST00000368824.8	2792	13	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_12	28.9888628039574	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	1	True	NA	-15	True	AATAAA	-14	NA	151790500	151773493	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_9710.known	chr1	-	2768	13	FSM	ENSG00000182134.17	ENST00000458431.6	2768	13	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_12	47.0841445357847	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTCTAAAACCAAAT	-4	True	NA	-19	True	AATAAA	-10	NA	151790505	151773497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
transcript_97100.known	chr3	-	3227	6	FSM	ENSG00000145029.14	ENST00000273598.8	3227	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	9.76524449258696	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGGGAAGCGGCTG	-32	True	NA	NA	False	NA	NA	NA	49429324	49422332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_97104.known	chr3	-	1271	5	FSM	ENSG00000145029.14	ENST00000436744.2	1271	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	13.3510299228187	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCATAAGAACTGGGACC	-34	True	NA	NA	False	NA	NA	NA	49429326	49424176	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49424875_49424948_49425054_49425366_49425439_49426251_49426429_49429107
transcript_97114.nnic	chr3	-	906	3	NNC	ENSG00000145029.14	novel	3227	6	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	17.5	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	-38	True	NA	-4	True	AATAAA	-16	NA	49429330	49422945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_49423539_49426338_49426429_49429107
transcript_97115.nnic	chr3	-	886	3	NNC	ENSG00000145029.14	novel	3227	6	NA	NA	-4	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	20.5	161	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	-38	True	NA	-4	True	AATAAA	-16	NA	49429330	49422945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_49423539_49426358_49426429_49429107
transcript_97116.nnic	chr3	-	900	3	NNC	ENSG00000145029.14	novel	2040	7	NA	NA	-4	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.5	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	-38	True	NA	-4	True	AATAAA	-16	NA	49429330	49422945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_49423564_49426369_49426429_49429107
transcript_97118.known	chr3	-	2110	9	FSM	ENSG00000145020.16	ENST00000478594.6	2110	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	201.154014377044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	-7	True	NA	-51	True	NA	NA	NA	49422469	49416821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_97119.known	chr3	-	1509	6	FSM	ENSG00000145020.16	ENST00000636597.1	1509	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	221.999459458801	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTCCTTCTTACTTG	6801	False	NA	-30	True	NA	NA	NA	49422491	49416800	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_97120.known	chr3	-	2403	8	FSM	ENSG00000145020.16	ENST00000636991.1	2403	8	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_3	78.3414817009612	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	-11	True	NA	-23	True	ATTAAA	-3	NA	49422473	49416793	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
transcript_97121.known	chr3	-	1823	8	FSM	ENSG00000145020.16	ENST00000637682.1	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	187.105557896922	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTAGCTTCATTGTT	5	True	NA	-9	True	ATTAAA	-17	NA	49422457	49416779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_97122.known	chr3	-	1860	8	FSM	ENSG00000145020.16	ENST00000458307.6	1860	8	0	0	0	0	multi-exon	TRUE	canonical	1	12	junction_5	187.308759615164	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTAGCTTCATTGTTC	-7	True	NA	-8	True	ATTAAA	-18	NA	49422469	49416778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49421491_49421573_49422103_49422272_49422360
transcript_97123.known	chr3	-	2768	6	FSM	ENSG00000145020.16	ENST00000635772.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_5	41.8788729552265	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	8	True	NA	-51	True	NA	NA	NA	49422454	49416821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49420343_49421491_49421573_49422103_49422272_49422360
transcript_97124.known	chr3	-	2448	7	FSM	ENSG00000145020.16	ENST00000638092.1	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	171.797765475056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	8	True	NA	-53	True	NA	NA	NA	49422454	49416823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_97125.known	chr3	-	2842	2	FSM	ENSG00000226913.2	ENST00000665395.1	2842	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGAGAGTGATAGGCAC	233	False	NA	NA	False	NA	NA	NA	49554305	49549358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49551443_49553547
transcript_97127.nic	chr3	+	2151	20	NIC	ENSG00000164062.13	novel	2879	22	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	284.839567032687	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCCTGCTGGTACT	-22	True	NA	27	True	AATAAA	-13	NA	49674350	49683503	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_49674414_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_97131.known	chr3	+	2879	22	FSM	ENSG00000164062.13	ENST00000296456.10	2879	22	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	120.652722161911	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTCTGACAAGAAGTT	-22	True	NA	2	True	CATAAA	-14	NA	49674350	49683971	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49674414_49674488_49674622_49675182_49675310_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_97132.known	chr3	+	4255	39	FSM	ENSG00000164068.16	ENST00000327697.11	4255	39	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	31.6696613736798	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGGCCCTTCT	0	True	NA	28	True	ATTAAA	-16	NA	49689556	49721529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49689607_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
transcript_97134.known	chr3	-	6108	10	FSM	ENSG00000173540.14	ENST00000480687.5	6108	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	71.6360830522002	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGCAGACAATGGCG	-5	True	NA	-16	True	AATAAA	-23	NA	49723951	49716843	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597_49723732_49723839
transcript_97138.known	chr3	-	3144	9	FSM	ENSG00000173540.14	ENST00000308388.7	3144	9	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	22.868851632734	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCTTCCAGACTCCCC	-5	True	NA	-8	True	AATAAA	-19	NA	49723951	49719915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_97141.known	chr3	-	3217	8	FSM	ENSG00000173540.14	ENST00000308375.10	3217	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	23.1604871120041	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGAGACATTCTTCCA	-5	True	NA	-16	True	AATAAA	-11	NA	49723951	49719923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_97142.known	chr3	-	2510	7	FSM	ENSG00000173540.14	ENST00000677393.1	2510	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	115.540396975834	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTCTT	-5	True	NA	NA	False	NA	NA	NA	49723951	49720334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49721884_49721972_49722148_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_97147.known	chr3	-	2856	1	FSM	ENSG00000176020.9	ENST00000320431.8	2856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	59	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGTCCTCCGTGTGTTC	-4	True	NA	-1	True	AATAAA	-38	NA	49719684	49716828	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49716800_49719700
transcript_97148.known	chr3	-	4471	6	FSM	ENSG00000176095.12	ENST00000321599.9	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	14.5106857177736	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTCTGTCTTTGTGAA	-10	True	NA	-1	True	AATAAA	-16	NA	49786542	49724293	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
transcript_97151.known	chr3	+	1033	2	FSM	ENSG00000185614.7	ENST00000333323.6	1033	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCTCCATACCCCT	-13	True	NA	NA	False	AATAAA	-17	NA	49803260	49805030	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49803444_49804180
transcript_97154.known	chr3	-	2023	15	FSM	ENSG00000183763.9	ENST00000331456.7	2023	15	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_8	12.4146062756574	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-16	True	NA	-15	True	AATAAA	-19	NA	49856564	49828600	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_97155.known	chr3	-	2905	12	FSM	ENSG00000164076.17	ENST00000488336.5	2905	12	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_6	89.1630505690382	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	9	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_97157.known	chr3	-	2998	11	FSM	ENSG00000164076.17	ENST00000477224.6	2998	11	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_5	86.1940253149834	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	9	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_97160.nnic	chr3	-	1286	5	NIC	ENSG00000164077.15	novel	2527	7	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	29.6426635105552	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGTCAAGCTCTGTC	-17	True	NA	-10	True	ATTAAA	-14	NA	49929838	49908872	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_49909155_49909252_49909401_49911525_49912012_49913219_49913360_49929608
transcript_97167.known	chr3	+	2260	17	FSM	ENSG00000004534.15	ENST00000442092.5	2260	17	0	0	0	0	multi-exon	TRUE	canonical	3	116	junction_2	168.99767703655	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	NA	False	NA	17	True	AATAAA	-17	NA	49940006	50077249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_97168.known	chr3	+	3630	21	FSM	ENSG00000004534.15	ENST00000266022.9	3630	21	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_6	172.657927706781	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	-6	True	NA	17	True	AATAAA	-17	NA	49940149	50077249	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_97169.known	chr3	+	581	2	FSM	ENSG00000004534.15	ENST00000493652.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGAGCTTGCAGTGAGC	-2	True	NA	NA	False	NA	NA	NA	49940096	49963027	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575
transcript_97170.known	chr3	+	4010	21	FSM	ENSG00000004534.15	ENST00000443081.5	4010	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	189.283279768711	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	-2	True	NA	16	True	AATAAA	-16	NA	49940040	50077248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_97171.known	chr3	+	2324	19	FSM	ENSG00000004534.15	ENST00000422955.5	2324	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	202.788584186939	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	3	True	NA	16	True	AATAAA	-16	NA	49940101	50077248	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_97172.known	chr3	+	480	3	FSM	ENSG00000004534.15	ENST00000491874.5	480	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	22	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CCAAAAAAAAAATGTTTACA	45	False	NA	NA	False	NA	NA	NA	49940538	49967358	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940748_49962575_49962686_49967197
transcript_97174.known	chr3	+	3177	25	FSM	ENSG00000003756.17	ENST00000347869.8	3177	25	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_6	56.3556261363692	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTGGTGATGAAATCA	-22	True	NA	86	True	NA	NA	NA	50088918	50119021	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_97195.known	chr3	+	2716	5	FSM	ENSG00000003756.17	ENST00000469838.5	2716	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	25.6356685108854	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTCCTGTTAAATGAAG	-22	True	NA	NA	False	AAAAAG	-5	NA	50088918	50102194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981
transcript_97198.nic	chr3	+	729	3	ISM	ENSG00000003756.17	ENST00000492472.1	902	4	-58	1742	-2	-1263	5prime_fragment	FALSE	canonical	3	161	junction_2	3	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCAGGGTTTACATAGG	-24	True	NA	NA	False	AAAAAG	-11	NA	50088916	50092588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_50089030_50090381_50090452_50092042
transcript_97199.nic	chr3	+	2309	2	ISM	ENSG00000003756.17	ENST00000492472.1	902	4	-58	1753	-2	-1274	intron_retention	TRUE	canonical	3	167	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATAATGGCCAGG	-24	True	NA	NA	False	NA	NA	NA	50088916	50092577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_50089030_50090381
transcript_972.known	chr1	-	569	3	FSM	ENSG00000162585.17	ENST00000378543.2	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	643	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-7	True	NA	-14	True	ATTAAA	-40	NA	2194750	2189547	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2189782_2193638_2193911_2194687
transcript_9720.known	chr1	+	851	6	FSM	ENSG00000143450.19	ENST00000321531.10	851	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2.48193472919817	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	6	True	NA	4	True	AATAAA	-15	NA	151762968	151771330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151768057_151768234_151770171_151770258_151771076
transcript_97200.known	chr3	+	3607	19	FSM	ENSG00000001617.12	ENST00000002829.8	3607	19	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	28.3512470603419	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTCTCTCCTTGGT	-29	True	NA	30	True	AATAAA	-20	NA	50155323	50189075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50155565_50159574_50159735_50173792_50173954_50174051_50174115_50174230_50174351_50175095_50175189_50176767_50176862_50182283_50182404_50182643_50182784_50182903_50183019_50183185_50183256_50183419_50183565_50184591_50184815_50185442_50185532_50185665_50185708_50185888_50186047_50186280_50186349_50186612_50186747_50187704
transcript_97201.known	chr3	+	5616	25	FSM	ENSG00000003756.17	ENST00000464087.6	5616	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	82.5234709878886	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGTGTCCTGTGTCTC	22	True	NA	22	True	AAGAAA	-10	NA	50088962	50118957	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107017_50107088_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_97202.known	chr3	+	569	5	FSM	ENSG00000003756.17	ENST00000441305.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	88.0014204430815	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTTGCTTAGTTCCTGA	13	True	NA	NA	False	AAAACA	-5	NA	50088953	50100054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50089058_50090381_50090452_50092042_50092209_50093719_50093876_50099981
transcript_97203.known	chr3	+	2953	16	FSM	ENSG00000188338.15	ENST00000614032.5	2953	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	2.86278807381119	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTAGTAGTCCCTGTG	5	True	NA	NA	False	AATAAA	-1	NA	50205270	50221486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50205349_50214148_50214301_50214401_50214484_50214652_50214769_50215385_50215460_50215543_50215637_50215739_50215822_50217237_50217321_50217414_50217474_50217675_50217841_50217916_50217997_50218269_50218371_50218592_50218718_50218803_50218949_50219880_50219985_50220072
transcript_97205.known	chr3	+	2407	9	FSM	ENSG00000114353.17	ENST00000422163.5	2407	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	336.170250765888	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTGCAAAT	0	True	NA	15	True	AGTAAA	-3	NA	50226291	50258898	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50227194_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_97210.known	chr3	+	2219	9	FSM	ENSG00000114353.17	ENST00000313601.11	2219	9	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_1	71.2915449054094	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGGTATTCTCTCCCA	-5	True	NA	15	True	AATAAA	-28	NA	50236203	50259362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50236454_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_97211.known	chr3	-	338	2	FSM	ENSG00000232352.2	ENST00000421735.2	518	2	170	10	162	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTTTGATCCTTCCATC	160	False	NA	NA	False	AATATA	-15	NA	50267371	50266640	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50266888_50267280
transcript_97213.nnic	chr3	-	438	3	Antisense	novelGene_ENSG00000283848.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	2.5	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGCCCCCTTTTCATT	NA	False	NA	NA	False	AATAAA	-19	NA	50276045	50271956	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_50272089_50272979_50273214_50275973
transcript_97219.known	chr3	-	1943	12	FSM	ENSG00000214706.12	ENST00000417626.8	1943	12	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_1	34.2861078293038	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGGTATTTTTCTGTT	-6	True	NA	-2	True	ATTAAA	-29	NA	50292429	50287731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50288272_50288408_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_97227.nic	chr3	-	2059	11	NIC	ENSG00000214706.12	novel	2275	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	656	junction_3	31.3872585613972	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTAACCCCTGGGT	4	True	NA	-13	True	ATTAAA	-18	NA	50292419	50287742	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_9723.known	chr1	+	729	6	FSM	ENSG00000143450.19	ENST00000453029.2	729	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	2.78567765543682	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAATCATCAAGTGTTCA	493	False	NA	-5	True	AATAAA	-6	NA	151763479	151771321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151763566_151767162_151767224_151767224_151767300_151768057_151768234_151770171_151770258_151771076
transcript_97236.known	chr3	-	959	4	FSM	ENSG00000186792.17	ENST00000415204.5	959	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	14.7648230602334	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGCCTACACCTCA	11	True	NA	NA	False	NA	NA	NA	50299401	50292980	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50294854_50299212
transcript_97237.known	chr3	-	1696	4	FSM	ENSG00000186792.17	ENST00000621157.5	1696	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	12.657891697365	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	4742	False	NA	-5	True	CATAAA	-18	NA	50298831	50292831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50298820
transcript_97239.known	chr3	-	1878	4	FSM	ENSG00000186792.17	ENST00000336307.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	7.87400787401181	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	7	True	NA	-5	True	CATAAA	-18	NA	50299405	50292831	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50299212
transcript_97241.known	chr3	-	636	3	FSM	ENSG00000186792.17	ENST00000513170.1	636	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGGCAAGGAAGCAGT	4341	False	NA	NA	False	TATAAA	-30	NA	50299232	50293044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50294708_50294854_50299212
transcript_97242.known	chr3	-	1402	3	FSM	ENSG00000186792.17	ENST00000450982.6	1402	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGGCAAGGAAGCAGT	4341	False	NA	NA	False	TATAAA	-30	NA	50299232	50293044	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50294708_50295620_50299212
transcript_97243.known	chr3	-	583	3	FSM	ENSG00000243477.6	ENST00000452674.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTGACTCTGGATCCT	-20	True	NA	NA	False	NA	NA	NA	50298889	50297435	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297673_50297806_50298084_50298820
transcript_97245.known	chr3	-	1330	2	FSM	ENSG00000243477.6	ENST00000354862.4	1330	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-4	True	NA	-4	True	AATAAA	-15	NA	50299416	50296401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297528_50299212
transcript_97246.known	chr3	-	765	2	FSM	ENSG00000243477.6	ENST00000450489.1	765	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCCGCCTGCACTCC	4456	False	NA	NA	False	NA	NA	NA	50299117	50297204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297673_50298820
transcript_97247.known	chr3	-	1464	2	FSM	ENSG00000243477.6	ENST00000443094.3	1464	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	7	True	NA	-4	True	AATAAA	-15	NA	50299405	50296401	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297673_50299212
transcript_97248.known	chr3	-	1163	2	FSM	ENSG00000243477.6	ENST00000417393.1	1163	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGTGACAGTTTATT	10	True	NA	-6	True	AATAAA	-13	NA	50298859	50296403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297528_50298820
transcript_97249.known	chr3	-	1820	2	FSM	ENSG00000243477.6	ENST00000443842.1	1820	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGCTCAGAGCCGTC	12	True	NA	-54	True	NA	NA	NA	50299400	50296451	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50298084_50299212
transcript_97250.known	chr3	-	2517	3	FSM	ENSG00000114378.17	ENST00000266031.8	2517	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTTTACTGAGCGCCTA	1	True	NA	0	True	AATAAA	-18	NA	50303572	50299889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50300801_50300987_50301078_50302056
transcript_97251.known	chr3	-	2031	4	FSM	ENSG00000114378.17	ENST00000395144.7	2031	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-1	True	NA	-3	True	AATAAA	-15	NA	50303574	50299892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50300801_50300987_50301078_50302056_50302981_50303465
transcript_97254.nic	chr3	-	2063	4	NIC	ENSG00000068001.14	novel	2318	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	270.767222700402	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCTCTGCTTGGATTTT	8675	False	NA	-29	True	ATTAAA	-12	NA	50321159	50317811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_50318540_50318955_50319046_50319568_50320536_50320881
transcript_97255.known	chr3	-	2136	4	FSM	ENSG00000068001.14	ENST00000395139.7	2136	4	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_3	75.021478406002	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCTTGGATTTTGTA	8121	False	NA	-26	True	ATTAAA	-15	NA	50321713	50317808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50321365
transcript_97256.known	chr3	-	1882	4	FSM	ENSG00000068001.14	ENST00000357750.9	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	247.3715154715	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTGGATTTTGTAC	-2	True	NA	-25	True	ATTAAA	-16	NA	50322745	50317807	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50322652
transcript_97258.known	chr3	-	1669	3	FSM	ENSG00000114383.10	ENST00000232496.5	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	12	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGTGGCATCCTGTG	-13	True	NA	-4	True	AATAAA	-20	NA	50328223	50324908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50326187_50326356_50326478_50327953
transcript_9726.known	chr1	+	745	5	FSM	ENSG00000143450.19	ENST00000635322.1	745	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	2.8613807855649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	NA	False	NA	4	True	AATAAA	-15	NA	151762898	151771330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151770171_151770258_151771076
transcript_97260.known	chr3	-	1757	5	FSM	ENSG00000068028.18	ENST00000327761.7	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	12.4774797134678	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGAATCTTTTATACAT	8280	False	NA	-6	True	AATAAA	-20	NA	50337464	50329781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
transcript_97263.known	chr3	+	790	1	FSM	ENSG00000281358.1	ENST00000629828.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTTGCTTTTGTCAC	NA	False	NA	NA	False	ATTAAA	-18	NA	50337510	50338300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50337500_50338300
transcript_97264.known	chr3	-	1774	12	FSM	ENSG00000004838.14	ENST00000231749.8	1774	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.7721444263289	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGTATCTCCGCGTGGT	5406	False	50345744	NA	False	AGTAAA	-16	NA	50345732	50341111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50341486_50341573_50341700_50341809_50341932_50342014_50342141_50342396_50342570_50342917_50343019_50343117_50343207_50343306_50343445_50343562_50343617_50343733_50343851_50345123_50345233_50345487
transcript_97267.known	chr3	-	1542	11	FSM	ENSG00000114388.14	ENST00000232501.8	1542	11	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	23.2036635038521	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCTGATGCGGTGACTC	-13	True	NA	NA	False	AATAAA	-44	NA	50350775	50347329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930_50350023_50350574
transcript_97270.nic	chr3	-	1242	10	NIC	ENSG00000114388.14	novel	1542	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_8	66.9866395376213	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATTGAGTGCTGTTT	-42	True	NA	-6	True	AATAAA	-18	NA	50350804	50347489	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349930_50350023_50350574
transcript_97282.known	chr3	-	1747	9	FSM	ENSG00000114388.14	ENST00000451194.5	1747	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	60.2821490990492	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTATTGAGTGCTGTT	8	True	NA	-7	True	AATAAA	-17	NA	50350754	50347490	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50347674_50347758_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349829_50349930_50350023_50350574
transcript_97289.known	chr3	-	1371	11	FSM	ENSG00000114388.14	ENST00000667046.1	1371	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	83.9505211419203	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCTGTAAATAAAGACAT	8730	False	NA	-38	True	NA	NA	NA	50350826	50347521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348710_50348783_50348873_50349011_50349385_50349491_50349664_50349834_50349930_50350023_50350574
transcript_97290.known	chr3	-	1905	10	FSM	ENSG00000114388.14	ENST00000479512.5	1905	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	88.4865896235688	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAACAGCCTTTATTGA	-4	True	NA	-15	True	AATAAA	-9	NA	50350766	50347498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349491_50349664_50349829_50349932
transcript_97291.known	chr3	-	939	8	FSM	ENSG00000114388.14	ENST00000448302.1	939	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	60.7309220904737	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGTGGGTTCTGGGGGA	-19	True	NA	NA	False	NA	NA	NA	50350781	50348315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349829_50349930_50350023_50350574
transcript_97294.known	chr3	+	1212	4	FSM	ENSG00000114395.11	ENST00000424512.5	1212	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.0015014862687	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTTGTAAAAAATGA	-21	True	NA	-4	True	AAAAAG	-2	NA	50350844	50354052	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50350989_50351342_50351561_50352008_50352047_50353240
transcript_97295.known	chr3	+	1142	4	FSM	ENSG00000114395.11	ENST00000425346.6	1142	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	74.0015014862687	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	-4	True	NA	13	True	AGTAAA	-15	NA	50350861	50354069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50350985_50351408_50351561_50352008_50352047_50353240
transcript_97296.known	chr3	+	408	4	FSM	ENSG00000272104.1	ENST00000606589.1	408	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.54247233265651	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGGGGGCATCTTCTT	26	True	NA	NA	False	NA	NA	NA	50350891	50367923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50350985_50351408_50351561_50366296_50366332_50367795
transcript_973.known	chr1	-	314	2	FSM	ENSG00000162585.17	ENST00000420964.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGGCTGAGGCGGG	NA	False	NA	NA	False	NA	NA	NA	2212574	2212170	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2212459_2212548
transcript_97301.nic	chr3	+	1206	3	NIC	ENSG00000114395.11	novel	1225	4	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	6189	False	NA	13	True	AGTAAA	-15	NA	50350825	50354069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_50350985_50351342_50351561_50353240
transcript_97303.nic	chr3	+	1134	3	NIC	ENSG00000114395.11	novel	1142	4	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	5.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	6195	False	NA	13	True	AGTAAA	-15	NA	50350831	50354069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_50350985_50351408_50351561_50353240
transcript_97305.known	chr3	+	1004	3	FSM	ENSG00000271858.5	ENST00000607121.5	1004	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	21	True	NA	12	True	AATAAA	-18	NA	50365373	50368197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50365941_50366296_50366332_50367795
transcript_97306.known	chr3	+	910	3	FSM	ENSG00000271858.5	ENST00000606665.5	910	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	7	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	32	False	NA	12	True	AATAAA	-18	NA	50365384	50368197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50365858_50366296_50366332_50367795
transcript_97308.known	chr3	+	841	2	FSM	ENSG00000114395.11	ENST00000419046.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGAGCAGCTTGGCAA	7	True	NA	NA	False	NA	NA	NA	50350872	50353393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50351561_50353240
transcript_97309.known	chr3	+	511	2	FSM	ENSG00000271858.5	ENST00000607088.5	511	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	870	False	NA	12	True	AATAAA	-18	NA	50366222	50368197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50366332_50367795
transcript_97310.known	chr3	-	2107	2	FSM	ENSG00000126062.4	ENST00000266025.4	2107	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCTCTTGTCAGGC	-11	True	NA	-21	True	AATAAA	-20	NA	50359521	50354749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50355548_50358212
transcript_97311.known	chr3	+	1533	3	FSM	ENSG00000114395.11	ENST00000418577.1	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAGGAGAGAAAAAAGT	-8	True	NA	-24	True	NA	NA	NA	50350857	50354032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50351561_50352008_50352047_50353240
transcript_97315.known	chr3	+	17064	11	FSM	ENSG00000114735.10	ENST00000434410.5	17064	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	22.7367543857957	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCATTCCCATTTTGT	-20	True	NA	NA	False	AATAAA	-15	NA	50569151	50596168	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50569274_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_97316.known	chr3	+	1499	11	FSM	ENSG00000114735.10	ENST00000455834.5	1499	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	21.6185105869947	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTGACCTAATGTTT	-11	True	NA	11	True	AGTAAA	-16	NA	50569492	50580672	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50569546_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_9732.known	chr1	+	992	2	FSM	ENSG00000203288.5	ENST00000389897.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTGTCTGGCTTCC	10	True	NA	7	True	TATAAA	-20	NA	151790841	151794402	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151791246_151793814
transcript_97320.known	chr3	+	16993	11	FSM	ENSG00000114735.10	ENST00000232854.9	16993	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.2702893201424	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTGCATTCCCATTTT	18	True	NA	NA	False	AATAAA	-13	NA	50569521	50596166	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50569575_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_97323.nic	chr3	+	1741	11	NIC	ENSG00000114735.10	novel	16993	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	23.017601960239	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACCTAATGTTTTGTC	17	True	NA	15	True	AGTAAA	-20	NA	50569520	50580676	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_50569812_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_97330.known	chr3	+	2500	11	FSM	ENSG00000114738.11	ENST00000357955.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	34.230980120353	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCCTGGGTTT	17	True	NA	35	True	AATAAA	-16	NA	50617169	50649288	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50617227_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_97336.known	chr3	-	2019	3	FSM	ENSG00000114737.16	ENST00000348721.4	2019	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCCCTCAATGGGGCCG	-3	True	NA	-34	True	AATAAA	-18	NA	50611774	50606488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50608143_50608372_50608594_50611630
transcript_9734.known	chr1	+	553	2	FSM	ENSG00000203288.5	ENST00000533481.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCGCGCTAGGGGCTCA	NA	False	NA	NA	False	NA	NA	NA	151790803	151791545	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151791246_151791434
transcript_97341.known	chr3	+	909	4	FSM	ENSG00000145050.19	ENST00000528157.7	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_1	26.106618998935	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCTGCTTTCCAGTT	1	True	NA	70	True	NA	NA	NA	51385290	51389397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51385437_51386207_51386336_51387736_51387879_51388904
transcript_97342.known	chr3	+	436	2	FSM	ENSG00000145050.19	ENST00000482262.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTTTTTGTAATTTATT	2398	False	NA	17	True	AAAACA	-23	NA	51387687	51389149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51387879_51388904
transcript_97343.known	chr3	+	6624	1	FSM	ENSG00000259956.2	ENST00000563281.2	6624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	523	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGATTTGTAATTTC	-5	True	NA	15	True	AATAAA	-23	NA	51391284	51397908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51391300_51397900
transcript_97347.known	chr3	+	1488	6	FSM	ENSG00000164081.13	ENST00000611400.4	1488	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	60.2441698424005	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51672209_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_97348.known	chr3	+	1448	6	FSM	ENSG00000164081.13	ENST00000457573.5	1448	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	65.2184023110042	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51672340_51672393_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_9735.known	chr1	-	1224	7	FSM	ENSG00000143436.11	ENST00000368830.8	1224	7	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_3	57.2560040519769	3986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-5	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_97352.known	chr3	+	1320	5	FSM	ENSG00000164081.13	ENST00000341333.10	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	38.1149576937978	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTGTATTTGTTT	16	True	NA	16	True	AATAAA	-28	NA	51671251	51704323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_97358.known	chr3	+	1313	5	FSM	ENSG00000164081.13	ENST00000416589.5	1313	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.4369413748722	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGATTTGGGTTGTGTAT	60	False	NA	10	True	AATAAA	-22	NA	51671295	51704317	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671332_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_9736.known	chr1	-	1264	7	FSM	ENSG00000143436.11	ENST00000467306.5	1264	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	218.99822424445	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-5	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762949_151763147_151763326
transcript_97362.known	chr3	+	2290	5	FSM	ENSG00000164081.13	ENST00000415259.5	2290	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	52.3563510951632	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGAATAAAGCCAATG	19	True	NA	-24	True	NA	NA	NA	51671254	51704283	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_97363.known	chr3	+	1174	4	FSM	ENSG00000164081.13	ENST00000614067.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	57.9271573232759	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	4964	False	NA	15	True	AATAAA	-27	NA	51671174	51704322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51674270_51674563_51699405_51699575_51703723
transcript_97366.known	chr3	+	800	4	FSM	ENSG00000164081.13	ENST00000489026.5	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	62.744632351213	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGCACCCTCCTGC	4964	False	NA	NA	False	NA	NA	NA	51671174	51704018	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51684412_51684635_51699405_51699575_51703723
transcript_9737.known	chr1	-	693	2	FSM	ENSG00000143436.11	ENST00000462783.1	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTTAGGAAAAATAAG	2	True	NA	NA	False	NA	NA	NA	151763489	151762616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151763147_151763326
transcript_97372.known	chr3	+	1910	4	FSM	ENSG00000164082.15	ENST00000475478.5	1910	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	8.28653526310404	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	16	True	NA	48	True	AATAAA	-20	NA	51707089	51718613	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51707168_51715061_51716138_51717636_51717818_51718038
transcript_97374.known	chr3	-	2986	3	FSM	ENSG00000287707.1	ENST00000667061.1	2986	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCTCATTTTAGTGTTAG	9453	False	NA	-7	True	AATAAA	-10	NA	51932483	51927070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51927265_51929274_51929371_51929787
transcript_97377.known	chr3	-	1542	15	FSM	ENSG00000114767.7	ENST00000232888.7	1542	15	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_9	31.2716863527847	1921	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-8	True	NA	-7	True	ATTAAA	-18	NA	51941904	51933428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_97379.known	chr3	+	2337	11	FSM	ENSG00000041880.15	ENST00000398755.8	2337	11	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_3	3.55105618091294	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGAATGGTACTCTGTTA	-5	True	NA	24	True	CATAAA	-25	NA	51942362	51948867	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51942709_51943353_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_9738.known	chr1	+	3789	5	FSM	ENSG00000143450.19	ENST00000479764.7	3789	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3.03108891324554	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTCACGGTTTCTTGG	591	False	NA	6	True	AATAAA	-17	NA	151763577	151771332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151766889_151767162_151767224_151767224_151767300_151770171_151770258_151771076
transcript_97387.known	chr3	+	1422	15	FSM	ENSG00000243989.9	ENST00000636358.2	1422	15	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	25.176114368462	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	37	True	NA	38	True	AATAAA	-38	NA	51983534	51989197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_97394.known	chr3	+	1457	14	FSM	ENSG00000243989.9	ENST00000636880.1	1457	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	89.215847558723	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	92	False	NA	38	True	AATAAA	-38	NA	51983434	51989197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046_51984159_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_97395.known	chr3	+	1409	14	FSM	ENSG00000243989.9	ENST00000476351.5	1409	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	85.8760631657744	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	-55	True	NA	38	True	AATAAA	-38	NA	51983442	51989197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046_51984159_51985400_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_97398.known	chr3	+	1319	13	FSM	ENSG00000243989.9	ENST00000476854.5	1319	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	95.443809821975	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	-55	True	NA	38	True	AATAAA	-38	NA	51983442	51989197	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_97411.known	chr3	+	1066	5	FSM	ENSG00000248487.10	ENST00000273596.8	1066	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	10.8857705285386	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGGTTCCGTTTCCTG	-5	True	NA	12	True	AATAAA	-26	NA	51975063	51981196	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51975205_51977870_51978083_51978258_51978375_51980392_51980629_51980835
transcript_97413.known	chr3	-	980	5	FSM	ENSG00000114779.20	ENST00000525795.1	980	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.7792189893897	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTCTTTCTCTTGCAG	-22	True	NA	NA	False	NA	NA	NA	51974049	51969272	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51971811_51971893_51973964
transcript_97416.known	chr3	-	1657	4	FSM	ENSG00000114779.20	ENST00000361143.10	1657	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	5.8878405775519	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCGGCTCCTGCTTCT	-22	True	NA	-12	True	AATAAA	-15	NA	51974049	51968514	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964
transcript_97417.known	chr3	-	1818	4	FSM	ENSG00000114779.20	ENST00000395008.6	1818	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.56846672960488	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGCAATTAGACCCCA	-4	True	NA	-27	True	NA	NA	NA	51974031	51968529	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971893_51973964
transcript_97419.known	chr3	-	1998	3	FSM	ENSG00000114779.20	ENST00000487005.1	1998	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	13	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCACCGGCTCCTGCTTC	8732	False	NA	-13	True	AATAAA	-14	NA	51974630	51968515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51969606_51969942_51970185_51973964
transcript_9742.nnic	chr1	+	2012	4	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-2980	1161	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	18.9912260443255	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATCAAAGTTCTGATTT	-8	True	NA	10	True	AGTAAA	-22	NA	151838896	151851546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_151839106_151841740_151842032_151844044_151844243_151850232
transcript_97420.known	chr3	+	781	2	FSM	ENSG00000243989.9	ENST00000496679.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGGCTGGCAGATTGCT	-3	True	NA	NA	False	NA	NA	NA	51983339	51984577	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046
transcript_97421.known	chr3	-	2015	13	FSM	ENSG00000090097.22	ENST00000355852.6	2015	13	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_12	28.3709309368273	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGAAATACTGGTGTTG	-10	True	NA	-10	True	AATAAA	-20	NA	51967457	51957453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51967325
transcript_97422.known	chr3	-	1784	13	FSM	ENSG00000090097.22	ENST00000471622.5	1784	13	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.3484830074745	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGTTTTTGAATA	7320	False	NA	-51	True	NA	NA	NA	51962079	51957494	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51958153_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940
transcript_97423.known	chr3	-	2156	14	FSM	ENSG00000090097.22	ENST00000461554.6	2156	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	58.8152256582491	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTTGTGAAATACTGGT	-7	True	NA	-14	True	AATAAA	-16	NA	51967454	51957457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51958350_51958789_51958960_51959046_51959100_51959228_51959293_51959366_51959412_51959576_51959652_51959894_51960024_51960188_51960321_51960525_51960643_51960865_51960899_51961009_51961034_51961159_51961305_51961940_51962089_51967325
transcript_97424.known	chr3	+	674	3	FSM	ENSG00000248487.10	ENST00000491470.1	674	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACAGGTTCCGTTTCCT	-10	True	NA	11	True	AATAAA	-25	NA	51975102	51981195	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51975205_51977870_51978083_51980835
transcript_97425.known	chr3	+	456	3	FSM	ENSG00000243989.9	ENST00000638077.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_2	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCTGAAGTACTAACA	2286	False	NA	15	True	AATAAA	-15	NA	51988472	51989174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51988604_51988765_51988827_51988910
transcript_97439.known	chr3	-	910	4	FSM	ENSG00000162244.12	ENST00000648640.1	910	4	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_3	3677.22760906758	19200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGCCCTGAAGTGCAAG	553	False	NA	73	True	NA	NA	NA	51995857	51993521	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995662
transcript_97440.known	chr3	-	713	4	FSM	ENSG00000162244.12	ENST00000495383.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	3616.91203468742	10176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	566	False	NA	-34	True	AATAAA	-12	NA	51995844	51993628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995739
transcript_97441.known	chr3	-	670	4	FSM	ENSG00000162244.12	ENST00000479017.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	3693.72028658852	9759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	580	False	NA	-34	True	AATAAA	-12	NA	51995830	51993628	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995768
transcript_97442.known	chr3	-	537	4	FSM	ENSG00000162244.12	ENST00000492277.5	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3690.89296632792	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTCTGCCAACATGAG	596	False	NA	NA	False	NA	NA	NA	51995814	51993749	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995764
transcript_97449.known	chr3	-	719	5	FSM	ENSG00000162244.12	ENST00000480306.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3214.55148504422	2951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	1	True	NA	-33	True	AATAAA	-13	NA	51995881	51993627	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51994772_51994858_51995041_51995107_51995424_51995470_51995856
transcript_9745.known	chr1	-	1832	7	FSM	ENSG00000159445.13	ENST00000471464.5	1832	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	24.3361870472759	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGTACTGTTGTTT	10	True	NA	0	True	ATTAAA	-19	NA	151909502	151874054	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151889982_151890215_151895007_151895195_151909359
transcript_97451.known	chr3	-	1760	11	FSM	ENSG00000164087.8	ENST00000474012.1	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	70.9707686304721	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGTTTTCTCTAAATCT	3	True	NA	NA	False	NA	NA	NA	52154404	52075453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
transcript_97467.known	chr3	-	1936	11	FSM	ENSG00000164087.8	ENST00000296484.7	1936	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	37.6409351637283	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	-16	True	NA	8	True	ATTAAA	-43	NA	52154423	52075225	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_97468.known	chr3	+	2212	11	FSM	ENSG00000023330.15	ENST00000310271.6	2212	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.6262772003521	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	5	True	NA	30	True	AATAAA	-15	NA	52198131	52214324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52198256_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_97474.known	chr3	+	2375	12	FSM	ENSG00000023330.15	ENST00000484952.6	2375	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	98.3040484945214	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	-2	True	NA	33	True	AATAAA	-18	NA	52198159	52214327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_97475.known	chr3	+	1790	9	FSM	ENSG00000164088.18	ENST00000409502.7	1790	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	10.4133327998293	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTTGTGAGTCATGAAT	2	True	NA	25	True	ATTAAA	-15	NA	52246208	52250597	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52246315_52246694_52246813_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
transcript_97478.known	chr3	-	1558	9	FSM	ENSG00000247596.10	ENST00000678549.1	1558	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	181.162176998953	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-26	True	NA	-41	True	NA	NA	NA	52239149	52228632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232097_52235028_52235107_52238991
transcript_97480.known	chr3	-	1579	9	FSM	ENSG00000247596.10	ENST00000676989.1	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	175.608762594581	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-26	True	NA	-41	True	NA	NA	NA	52239149	52228632	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232118_52235028_52235107_52238991
transcript_97484.known	chr3	-	1426	8	FSM	ENSG00000247596.10	ENST00000678838.1	1426	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	189.879231220741	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-26	True	NA	-20	True	AATAAA	-16	NA	52239149	52228611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52235028_52235107_52238991
transcript_97487.known	chr3	+	1056	2	FSM	ENSG00000243224.1	ENST00000464958.1	1056	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTTGTGTTGTATACT	43	False	NA	NA	False	AATGAA	-7	NA	52239299	52241097	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52239436_52240177
transcript_97489.known	chr3	-	1531	8	FSM	ENSG00000247596.10	ENST00000678352.1	1531	8	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	34.4164175346355	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-1	True	NA	-20	True	AATAAA	-16	NA	52235190	52228611	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028
transcript_97490.known	chr3	-	1440	8	FSM	ENSG00000247596.10	ENST00000499914.2	1440	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	190.264799365387	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTATTTTCTAAAGAATAA	-19	True	NA	-56	True	NA	NA	NA	52239142	52228647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028_52235107_52238991
transcript_97491.known	chr3	-	4286	9	FSM	ENSG00000164091.12	ENST00000296490.8	4286	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_8	5.3619026473818	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGCTGCAGCCTCTT	-11	True	NA	-22	True	TATAAA	-32	NA	52278649	52254433	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52257520_52258535_52258679_52259196_52259267_52259716_52259873_52260384_52260502_52261379_52261480_52266951_52267019_52270711_52270810_52278200
transcript_97496.nic	chr3	+	1425	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	8.5374989832438	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	9984	False	NA	10	True	AATAAA	-18	NA	52287803	52293475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293175_52293306
transcript_97497.nic	chr3	+	1439	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	7.56453714527348	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	9984	False	NA	6	True	AATAAA	-14	NA	52287803	52293471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_97503.nic	chr3	+	1010	6	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	2	6	junction_5	7.17216843081644	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	9983	False	NA	10	True	AATAAA	-18	NA	52287802	52293475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293175_52293306
transcript_97505.known	chr3	+	992	6	FSM	ENSG00000168237.18	ENST00000471180.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	5.88557558782486	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	7	True	NA	6	True	AATAAA	-14	NA	52287834	52293471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_97516.known	chr3	+	3791	5	FSM	ENSG00000168237.18	ENST00000436784.7	3791	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	7.04893608993584	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTCCCTTGCTCTTG	0	True	NA	10	True	CATAAA	-22	NA	52287827	52295257	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259
transcript_97518.known	chr3	+	935	5	FSM	ENSG00000168237.18	ENST00000473032.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.0374299499424	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTCTCAGTGCGCCT	-8	True	NA	4	True	AATAAA	-12	NA	52287819	52293469	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52293045_52293193_52293306
transcript_97521.nic	chr3	+	1618	4	ISM	ENSG00000168237.18	ENST00000471180.5	992	6	-32	-4	-17	0	intron_retention	FALSE	canonical	3	17	junction_1	3.85861230093008	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	9983	False	NA	10	True	AATAAA	-18	NA	52287802	52293475	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259
transcript_97528.nic	chr3	+	1438	3	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-17	0	intron_retention	FALSE	canonical	1	1	junction_2	8	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	9983	False	NA	6	True	AATAAA	-14	NA	52287802	52293471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_52287877_52290959_52291112_52292259
transcript_9753.known	chr1	-	4798	6	FSM	ENSG00000159445.13	ENST00000368814.8	4798	6	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_4	26.8477187112797	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTGGAAGAATTTT	1	True	NA	NA	False	AATAAA	-21	NA	151909511	151870865	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151895007_151895195_151909359
transcript_97532.nnic	chr3	-	865	3	NNC	ENSG00000164091.12	novel	574	6	NA	NA	-1	-21875	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTTGTCAGTAAATT	-5	True	NA	NA	False	AAGAAA	-18	NA	52288021	52282319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_52282932_52284527_52284592_52287832
transcript_97533.nnic	chr3	-	707	3	NNC	ENSG00000164091.12	novel	574	6	NA	NA	-28	-21875	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTGTTGTCAGTAAATT	NA	False	NA	NA	False	AAGAAA	-18	NA	52288048	52282319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_52282932_52284527_52284592_52288017
transcript_97535.known	chr3	-	3434	17	FSM	ENSG00000163930.10	ENST00000296288.9	3434	17	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	81.7602248957279	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	618	False	NA	-1	True	AATAAA	-8	NA	52409914	52401025	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406323_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_97536.known	chr3	-	3600	17	FSM	ENSG00000163930.10	ENST00000460680.6	3600	17	0	0	0	0	multi-exon	TRUE	canonical	3	201	junction_9	50.3636773875776	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTGTGGTTGCT	-3	True	NA	17	True	AATAAA	-26	NA	52410008	52401007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406377_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_97543.known	chr3	+	576	5	FSM	ENSG00000010318.22	ENST00000482327.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	13.7727085208393	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	297	False	NA	NA	False	NA	NA	NA	52411035	52414836	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52414727
transcript_97545.nic	chr3	-	1320	11	ISM	ENSG00000010319.7	ENST00000231721.7	4993	16	-11	6974	-11	381	5prime_fragment	FALSE	canonical	1	1	junction_1	1.37477270848675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCATGTTCTGGCCTGT	8926	False	NA	NA	False	NA	NA	NA	52445114	52440008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_52440099_52440376_52440522_52440753_52440824_52440933_52441049_52441263_52441410_52441573_52441691_52441818_52441910_52442184_52442305_52442558_52442622_52442746_52442908_52444912
transcript_97546.known	chr3	-	4993	16	FSM	ENSG00000010319.7	ENST00000231721.7	4993	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.72046505340853	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCTTGGGACTTCAGGA	0	True	NA	NA	False	ATTAAA	-36	NA	52445103	52433034	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52436074_52437526_52437667_52437970_52438200_52438919_52438962_52439679_52439772_52439866_52440099_52440376_52440522_52440753_52440824_52440933_52441049_52441263_52441410_52441573_52441691_52441818_52441910_52442184_52442305_52442558_52442622_52442746_52442908_52444912
transcript_97550.known	chr3	-	687	6	FSM	ENSG00000114854.8	ENST00000232975.8	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	6.70522184569608	1831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTATCTGGCTCTGG	-1	True	NA	-9	True	AATAAA	-15	NA	52454041	52451099	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52451307_52451390_52451528_52451743_52451859_52452105_52452253_52452482_52452514_52453991
transcript_97551.known	chr3	+	5139	21	FSM	ENSG00000010322.16	ENST00000345716.9	5139	21	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_13	33.9033921606673	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTCTAAACCAAGGG	-11	True	NA	36	True	AATAAA	-19	NA	52455603	52493068	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52484512_52484638_52485777_52485828_52487195_52488606_52489335_52489679_52490074_52490232_52490704_52490834_52491351_52491514_52491871
transcript_97552.known	chr3	+	2589	14	FSM	ENSG00000010322.16	ENST00000420808.2	2589	14	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_13	92.1056121361899	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCACCTCTCTTTCCTTT	2	True	NA	10	True	AATAAA	-20	NA	52455616	52481914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52480878
transcript_97553.known	chr3	+	3168	13	FSM	ENSG00000010322.16	ENST00000488380.5	3168	13	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_9	24.6813019645777	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGCACCTCTCTTTC	2	True	NA	6	True	AATAAA	-16	NA	52455616	52481910	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183
transcript_97557.nic	chr3	+	1068	7	ISM	ENSG00000010322.16	ENST00000488380.5	3168	13	-13	7816	0	1721	5prime_fragment	FALSE	canonical	3	346	junction_3	20.7015834069657	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGGTGTTTTTGTGT	-11	True	NA	NA	False	AATAAA	-4	NA	52455603	52474094	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733
transcript_9757.nnic	chr1	-	1021	3	NNC	ENSG00000159445.13	novel	643	2	NA	NA	40	467	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATAGTTTGTTTTAGGG	-5	True	NA	NA	False	AATATA	-16	NA	151909462	151894362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_151895195_151907320_151907407_151909359
transcript_97573.known	chr3	+	314	3	FSM	ENSG00000168273.8	ENST00000491607.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTTCAGTGCCTTT	3	True	NA	-20	True	AATAAA	-18	NA	52534012	52540526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52534149_52534802_52534878_52540423
transcript_97576.known	chr3	+	274	2	FSM	ENSG00000168273.8	ENST00000307106.3	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	2300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCAGTGCCTT	-3	True	NA	-21	True	AATAAA	-17	NA	52536601	52540525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52536774_52540423
transcript_97577.known	chr3	-	1877	14	FSM	ENSG00000168268.11	ENST00000422318.7	1877	14	0	0	0	0	multi-exon	FALSE	canonical	3	1886	junction_13	157.696660352686	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-22	True	NA	-23	True	AATAAA	-17	NA	52533857	52524386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52533505
transcript_97578.known	chr3	+	1769	2	FSM	ENSG00000168273.8	ENST00000477703.6	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	0	2908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTCTGCTGTGGGT	0	True	NA	12	True	AATAAA	-13	NA	52536604	52541890	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52536907_52540423
transcript_97579.known	chr3	-	2047	14	FSM	ENSG00000168268.11	ENST00000307076.8	2047	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_13	586.722135175865	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-4	True	NA	-23	True	AATAAA	-17	NA	52535054	52524386	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534532
transcript_9758.known	chr1	-	643	2	FSM	ENSG00000159445.13	ENST00000489410.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATTGTCAAGAATAAGA	205	False	NA	NA	False	AATAAA	-24	NA	151909637	151894829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151895195_151909359
transcript_97580.known	chr3	+	2041	15	FSM	ENSG00000163938.17	ENST00000394799.6	2041	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	338.111290698727	3358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAGTTTTATTTA	-5	True	NA	-2	True	AATAAA	-19	NA	52686015	52694492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686203_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_97592.known	chr3	-	1826	11	FSM	ENSG00000016864.19	ENST00000478968.6	1826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	80.8814564656201	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	-15	True	NA	-5	True	AATAAA	-17	NA	52705791	52694488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705702
transcript_97595.known	chr3	-	1856	10	FSM	ENSG00000016864.19	ENST00000266014.11	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_9	44.0204778385674	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-15	True	NA	-2	True	AATAAA	-20	NA	52705791	52694485	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
transcript_97596.known	chr3	-	1577	10	FSM	ENSG00000016864.19	ENST00000491606.5	1577	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	78.701969479804	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTTCAATAGGTAT	-5	True	NA	-19	True	AATAAA	-3	NA	52705781	52694502	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705698
transcript_97604.known	chr3	+	567	4	FSM	ENSG00000163938.17	ENST00000474423.1	567	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	599.659903612039	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTAGGTCTCTTTATG	150	False	NA	79	True	NA	NA	NA	52686170	52687616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686426_52686768_52686828_52687245_52687384_52687501
transcript_9761.known	chr1	-	616	3	FSM	ENSG00000197747.9	ENST00000368809.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1474.5	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAGACAGAATGTTT	1	True	NA	-19	True	AATAAA	-21	NA	151992578	151982917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151983325_151986098_151986252_151992522
transcript_97610.known	chr3	+	1933	15	FSM	ENSG00000163938.17	ENST00000418458.6	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_4	132.31872466873	12574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTTTTATTTACAGAT	11	True	NA	3	True	AATAAA	-24	NA	52686031	52694497	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_97611.known	chr3	+	2118	14	FSM	ENSG00000163938.17	ENST00000496254.5	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_4	127.693419828336	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATCTGGAATAAAAAAAG	28	False	NA	-35	True	AAAAAG	-29	NA	52686048	52694459	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_97612.known	chr3	+	729	7	FSM	ENSG00000163938.17	ENST00000492349.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	447.019263815579	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTTTATTAGTGGTAA	11	True	NA	NA	False	GATAAA	-16	NA	52686031	52690704	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688207_52689073_52689207_52690591
transcript_97613.known	chr3	-	4744	8	FSM	ENSG00000213533.13	ENST00000355083.11	4744	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	24.0916616958089	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCACATTTGTGGTTGTG	26	True	NA	NA	False	AATAAA	-37	NA	52897548	52836732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52840611_52842810_52842961_52843720_52843799_52844828_52844942_52849791_52849914_52852602_52852699_52855395_52855445_52897290
transcript_97617.known	chr3	-	514	3	FSM	ENSG00000213533.13	ENST00000485356.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	100	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCTGAGGTTGTTCAT	NA	False	NA	-2	True	ATTAAA	-17	NA	52852699	52847256	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52847552_52849791_52849914_52852602
transcript_97618.known	chr3	-	523	3	FSM	ENSG00000272573.6	ENST00000446157.3	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	7	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGTGTTGGTTGGTC	-1	True	NA	-10	True	AATAAA	-26	NA	52835019	52833120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52833431_52833616_52833750_52834939
transcript_97620.known	chr3	-	4553	21	FSM	ENSG00000163935.14	ENST00000394752.8	4553	21	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_20	17.7242066112986	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAACTGATTGTGATTTT	-14	True	NA	-4	True	AATATA	-19	NA	53046073	52903571	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52905277_52906112_52906242_52907068_52907315_52907554_52907734_52911002_52911179_52912537_52912648_52913477_52913618_52916149_52916215_52918483_52918527_52920536_52920651_52921704_52921832_52926030_52926114_52928190_52928342_52930328_52930431_52930940_52931036_52932061_52932309_52934812_52934902_52943352_52943594_52954316_52954412_52969100_52969259_53045815
transcript_97624.known	chr3	-	5081	13	FSM	ENSG00000163933.10	ENST00000296292.8	5081	13	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_3	47.6674679419832	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTTCTTTCATACC	4	True	NA	0	True	AATAAA	-25	NA	53130435	53088482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_97626.known	chr3	-	1800	12	FSM	ENSG00000163933.10	ENST00000394738.7	1800	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	99.435098647184	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-14	True	NA	-27	True	TTTAAA	-13	NA	53130453	53091664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53125908_53125995_53130337
transcript_97630.nnic	chr3	-	1728	11	NIC	ENSG00000163933.10	novel	1800	12	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_10	94.9410869960946	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-28	True	NA	-27	True	TTTAAA	-13	NA	53130467	53091664	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53130337
transcript_97632.nnic	chr3	-	1247	11	NNC	ENSG00000163933.10	novel	886	9	NA	NA	-20	378	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	110.0394929105	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACAAGTTCACTAGCAT	NA	False	NA	NA	False	TATAAA	-19	NA	53130473	53103194	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_53103267_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_97637.nnic	chr3	-	378	2	NNC	ENSG00000163933.10	novel	5081	13	NA	NA	-14	-25713	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGGCTCTTAGTATGCA	-28	True	NA	-2	True	AATAAA	-15	NA	53130467	53129754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_53130003_53130337
transcript_9764.known	chr1	-	671	3	FSM	ENSG00000197747.9	ENST00000368811.8	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	2961	junction_2	0.5	11135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACAGAATGTTTGTT	-22	True	NA	-16	True	AATAAA	-24	NA	151993859	151982914	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151983325_151986098_151986252_151993751
transcript_97640.nnic	chr3	+	1235	2	NNC	ENSG00000286531.1	novel	226	2	NA	NA	464	2148	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGGCATGGTGGCAG	-5	True	NA	NA	False	AATACA	-14	NA	53197283	53199507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_53197353_53198341
transcript_97645.known	chr3	-	2831	15	FSM	ENSG00000163931.17	ENST00000423525.6	2831	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	866.172818807434	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCAGGCAATTGCCCCC	18	False	NA	-10	True	AATAAA	-13	NA	53256000	53224713	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53225610_53225750_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_97646.known	chr3	-	2075	15	FSM	ENSG00000163931.17	ENST00000423516.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	1167.75203546238	4383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-4	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53237796_53237821_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_97647.known	chr3	-	1941	14	FSM	ENSG00000163931.17	ENST00000450814.6	1941	14	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	910.750448091147	3736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-4	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235065_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_97650.known	chr3	-	5926	10	FSM	ENSG00000272886.6	ENST00000610213.6	5926	10	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_7	13.0507083200231	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTTAATTGTGTTTT	-12	True	NA	15	True	AATAAA	-27	NA	53347543	53283428	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_97652.known	chr3	-	1853	9	FSM	ENSG00000272886.6	ENST00000294241.10	1853	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	55.17189048782	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	6	True	NA	NA	False	NA	NA	NA	53347525	53287369	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_97660.known	chr3	+	2016	11	FSM	ENSG00000056736.10	ENST00000288167.8	2016	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	7.83836717690617	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTACTGGACCAAATGAT	-1	True	NA	NA	False	AATAAA	-14	NA	53846567	53865794	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_97667.known	chr3	+	2822	10	FSM	ENSG00000056736.10	ENST00000475124.1	2822	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.18709405724277	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	15	False	NA	-3	True	AATAAA	-9	NA	53846583	53865588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53858819_53860129_53860229_53864745
transcript_97668.known	chr3	+	1048	10	FSM	ENSG00000056736.10	ENST00000494338.1	1048	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	11.3137084989848	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGTGGCAGAAAAA	16	False	NA	NA	False	NA	NA	NA	53846584	53864891	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_97674.nnic	chr3	+	1707	9	NIC	ENSG00000056736.10	novel	2822	10	NA	NA	-45	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	15.1858280972754	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	NA	False	NA	-3	True	AATAAA	-9	NA	53846522	53865588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53856843_53856987_53857615_53857691_53860129_53860229_53864745
transcript_97681.nnic	chr3	+	1552	8	NIC	ENSG00000056736.10	novel	1048	10	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	14.2814279283785	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	NA	False	NA	-3	True	AATAAA	-9	NA	53846522	53865588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_53846649_53848663_53848689_53849654_53849796_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_9769.known	chr1	-	563	3	FSM	ENSG00000163191.6	ENST00000271638.3	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	3404	junction_2	62.5	17926	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGAGTTGGTGAATTTG	-1	True	NA	-4	True	AATAAA	-27	NA	152037004	152032505	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_152032824_152033647_152033801_152036912
transcript_97690.nic	chr3	+	1012	3	ISM	ENSG00000056736.10	ENST00000494338.1	1048	10	-62	14376	-45	-14376	5prime_fragment	FALSE	canonical	3	40	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAGACCAGGCGTGGTG	NA	False	NA	NA	False	NA	NA	NA	53846522	53850515	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_53846649_53848663_53848689_53849654
transcript_97694.known	chr3	-	3579	13	FSM	ENSG00000113812.14	ENST00000335754.8	3579	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	15.5902391115581	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCCTCAGCCATTAC	-1	True	NA	-18	True	ATTAAA	-1	NA	53882152	53867065	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_97695.known	chr3	-	683	2	FSM	ENSG00000113812.14	ENST00000488802.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTAAACTCTCTTGCCCT	7004	False	NA	-8	True	AATAAA	-18	NA	53870297	53868495	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53868863_53869981
transcript_9770.known	chr1	+	619	2	FSM	ENSG00000169469.9	ENST00000307098.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTGTGTGTCATTG	-1	True	NA	NA	False	ATTAAA	-17	NA	153031202	153032900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153031248_153032326
transcript_97705.known	chr3	-	814	6	NNC	ENSG00000113811.12	novel	1497	5	NA	NA	-77	101	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	533.348441452677	4245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGTGTCACCTTTTC	NA	False	NA	-28	True	AATAAA	-17	NA	53891962	53885199	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_53885562_53885825_53885831_53885833_53885913_53886850_53886935_53888392_53888484_53891769
transcript_97706.known	chr3	-	611	5	FSM	ENSG00000113811.12	ENST00000488746.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	556.006913176446	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGTAAATATTTT	6	True	NA	-35	True	ATTAAA	-13	NA	53891865	53885300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53885562_53885825_53885905_53886850_53886935_53888392_53888484_53891769
transcript_97708.nnic	chr3	+	971	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349994	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.5662343819316	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54637683	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54637828_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_97709.nnic	chr3	+	1056	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349814	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.9350091933121	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54637863	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54638093_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_9771.known	chr1	-	677	2	FSM	ENSG00000241794.2	ENST00000392653.3	677	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGAATGGATCTTTT	-1	True	NA	NA	False	AATAAA	-16	NA	153057512	153056119	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153056755_153057470
transcript_97711.nnic	chr3	+	1016	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-346175	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.2151494687216	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54641502	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54641692_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_97712.nnic	chr3	+	869	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345827	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	10.9758432843435	42	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54641850	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_97714.nnic	chr3	+	955	9	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349996	-6399	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	8.20060973342836	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54637681	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54637828_54642127_54642242_54752598_54752678_54764217_54764352_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_97715.nnic	chr3	+	964	9	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349740	-6399	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.93640727585756	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54637937	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54638093_54642127_54642242_54752598_54752678_54764217_54764352_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_97717.nnic	chr3	+	1151	9	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-346211	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.45300878027732	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54641466	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54641809_54642127_54642242_54752598_54752678_54764217_54764352_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_97720.nnic	chr3	+	851	9	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345827	-6399	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	6.74421048010811	37	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54641850	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_97724.nnic	chr3	+	779	8	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345827	-6399	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	9.46745230044622	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	NA	False	NA	11	True	AATAAA	-14	NA	54641850	54879187	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_97728.nnic	chr3	+	3569	4	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-350498	-118641	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	7.07106781186548	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGCAAAAACAAGAAA	NA	False	NA	NA	False	AAAAAG	-41	NA	54637179	54766945	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54637828_54642127_54642242_54752598_54752678_54764217
transcript_9773.known	chr1	-	675	2	FSM	ENSG00000244094.2	ENST00000468739.2	675	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGAATGGATCTTTT	-1	True	NA	-8	True	AATAAA	-16	NA	153113516	153112120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153112753_153113473
transcript_97734.known	chr3	+	432	1	FSM	ENSG00000229806.1	ENST00000449885.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGCTCAGCTAATAAAG	19	False	NA	NA	False	NA	NA	NA	54626214	54626646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_54626200_54626600
transcript_9774.known	chr1	+	573	3	FSM	ENSG00000163220.11	ENST00000368738.4	573	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGCTCTGTGTGCTTC	0	True	NA	NA	False	AATAAA	-15	NA	153357853	153361023	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153357882_153358268_153358434_153360643
transcript_9776.known	chr1	-	673	3	FSM	ENSG00000197956.10	ENST00000496817.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	73	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9805	False	NA	-6	True	AATAAA	-20	NA	153536215	153534598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153534831_153535201_153535376_153535948
transcript_9777.nnic	chr1	-	719	3	NNC	ENSG00000197956.10	novel	673	4	NA	NA	-200	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	70	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9576	False	NA	-6	True	AATAAA	-20	NA	153536444	153534598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_153534831_153535201_153535361_153536116
transcript_9778.known	chr1	-	673	4	FSM	ENSG00000197956.10	ENST00000368720.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.7678690770727	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	9776	False	NA	-6	True	AATAAA	-20	NA	153536244	153534598	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153534831_153535201_153535361_153535788_153535934_153536107
transcript_97783.nnic	chr3	-	1444	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-218	0	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_3	3862.21295229676	552	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54640075	54632121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_54632808_54633558_54633741_54634460_54634566_54639604
transcript_97791.nnic	chr3	-	1137	4	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-218	-2	at_least_one_novel_splicesite	FALSE	canonical	3	371	junction_3	3713.10893995854	3439	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640075	54632123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_54632503_54633558_54633741_54634460_54634566_54639604
transcript_9780.known	chr1	-	566	4	FSM	ENSG00000196154.12	ENST00000354332.8	566	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	111.505854355525	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	2	True	NA	1	True	AATAAA	-25	NA	153545802	153543612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153543924_153544653_153544810_153545469_153545519_153545752
transcript_9781.known	chr1	-	573	3	FSM	ENSG00000196154.12	ENST00000368715.5	573	3	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	115.5	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	5031	False	NA	1	True	AATAAA	-25	NA	153545063	153543612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153543924_153544653_153544810_153544957
transcript_97829.nnic	chr3	-	955	3	NNC	ENSG00000265992.1	novel	3140	4	NA	NA	-218	-2	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_1	113.5	423	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTTTCTCTTCATATTT	NA	False	NA	-24	True	ATTAAA	-22	NA	54640075	54632123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_54632503_54634460_54634566_54639604
transcript_97838.known	chr3	-	3140	4	FSM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	0	0	0	multi-exon	FALSE	canonical	3	2161	junction_1	3129.71067175368	3270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	NA	False	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690
transcript_97841.nic	chr3	-	1304	3	NIC	ENSG00000187672.14	novel	658	2	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	5.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCATCCATT	60	False	56468513	-2	True	AATAAA	-13	NA	56468493	56433788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_56434050_56434350_56435148_56468247
transcript_97842.nic	chr3	-	1129	3	NIC	ENSG00000187672.14	novel	658	2	NA	NA	-26	-175	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	5.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTGGGCCACATTTG	60	False	56468513	NA	False	AATAAA	-15	NA	56468493	56433963	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_56434050_56434350_56435148_56468247
transcript_97844.known	chr3	-	658	2	FSM	ENSG00000187672.14	ENST00000477381.1	658	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCATCCATT	NA	False	NA	-2	True	AATAAA	-13	NA	56434747	56433788	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_56434050_56434350
transcript_97847.known	chr3	+	3042	18	FSM	ENSG00000180376.17	ENST00000341455.10	3042	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	33.2709335201319	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTAGTAGTAAAAAAAAAA	27	True	NA	7	True	AATAAA	-22	NA	56557218	56621808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_97855.nic	chr3	+	1549	11	ISM	ENSG00000180376.17	ENST00000394672.8	3134	18	-12	8184	0	-1500	5prime_fragment	FALSE	canonical	3	67	junction_10	30.3980262517158	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGAACAAGAAGAGG	-29	True	NA	NA	False	AAGAAA	-24	NA	56557162	56613653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588
transcript_9786.known	chr1	-	579	3	FSM	ENSG00000188015.10	ENST00000368712.1	579	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGCGAATGAGGGGTAG	5	True	NA	NA	False	NA	NA	NA	153549126	153547512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153547847_153548344_153548491_153549027
transcript_97862.nnic	chr3	+	1745	9	NNC	ENSG00000180376.17	novel	2188	7	NA	NA	0	240	intron_retention	FALSE	non_canonical	0	0	junction_7	62.3707413375855	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTTCTGATTAAATTT	-29	True	NA	6	True	AATAAA	-17	NA	56557162	56570986	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569312_56569994_56570560_56570671_56570926
transcript_97876.known	chr3	+	2188	7	FSM	ENSG00000180376.17	ENST00000442522.6	2188	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	43.4757275832031	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCGGAGATTGCAGT	36	False	NA	NA	False	NA	NA	NA	56557227	56570671	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569312
transcript_97888.nic	chr3	+	334	4	ISM	ENSG00000180376.17	ENST00000472582.5	768	6	-40	2871	0	-290	5prime_fragment	FALSE	canonical	3	130	junction_3	7.58653778449403	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATGACTTTTTCATCCA	-29	True	NA	NA	False	NA	NA	NA	56557162	56563835	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683
transcript_97889.known	chr3	-	3639	13	FSM	ENSG00000163947.12	ENST00000338458.8	3639	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	9.80929264637477	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTGTACAGTGTTTG	-4	True	NA	-1	True	AATAAA	-19	NA	57079308	56727417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56882291_56882355_56958822_56958890_57035087_57035177_57079225
transcript_9789.known	chr1	-	513	3	FSM	ENSG00000196154.12	ENST00000368716.9	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	16	2924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGATGGTTTGAGAGA	-2	True	NA	-7	True	AATAAA	-17	NA	153545806	153543620	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153543924_153544653_153544810_153545752
transcript_97891.known	chr3	-	3582	10	FSM	ENSG00000163947.12	ENST00000296315.8	3582	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	10.7059461959519	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCCATGTGTACAGTGTT	-1	True	NA	-3	True	AATAAA	-17	NA	56801949	56727419	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_97892.known	chr3	-	2024	9	FSM	ENSG00000163947.12	ENST00000495373.5	2024	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	9.81628111863143	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAATAGGAAGGGAT	-1	True	NA	0	True	GATAAA	-43	NA	56801949	56731592	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_97893.nic	chr3	-	742	3	ISM	ENSG00000163947.12	ENST00000338458.8	3639	13	-10	230912	-10	-184563	5prime_fragment	FALSE	canonical	3	12	junction_2	7.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTCAAGTGGC	-14	True	NA	NA	False	ATTAAA	-10	NA	57079318	56958329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_56958890_57035087_57035177_57079225
transcript_97894.nic	chr3	-	609	2	ISM	ENSG00000163947.12	ENST00000477833.5	757	7	11	279680	-10	-260894	5prime_fragment	FALSE	canonical	3	12	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTGGAGTTAGCA	-14	True	NA	NA	False	NA	NA	NA	57079318	57034660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_57035177_57079225
transcript_97895.known	chr3	-	514	6	FSM	ENSG00000163947.12	ENST00000468466.1	514	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.0915806492343	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGGGCACACAGGGC	3	True	NA	NA	False	ATTAAA	-23	NA	57079265	56773708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_56773817_56882291_56882355_56958822_56958890_57035087_57035177_57076745_57076893_57079225
transcript_97896.known	chr3	+	2190	2	FSM	ENSG00000186451.2	ENST00000334325.2	2190	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGCTAAGACATGTGT	-1	True	NA	NA	False	AATAAA	-15	NA	57060663	57075432	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57060787_57073365
transcript_97898.known	chr3	-	1308	7	FSM	ENSG00000163666.10	ENST00000647958.1	1308	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	102.244396749488	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTTGTTTTCATTAG	2	True	NA	NA	False	AGTAAA	-19	NA	57227606	57197837	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57198296_57198390_57198493_57198752_57198953_57199761_57200029_57211334_57211503_57226295_57226337_57227534
transcript_9790.known	chr1	-	755	2	FSM	ENSG00000196154.12	ENST00000481009.1	755	2	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_1	0	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-9	True	NA	1	True	AATAAA	-25	NA	153545097	153543612	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153543924_153544653
transcript_97912.known	chr3	-	757	3	FSM	ENSG00000163666.10	ENST00000473921.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTCATGACTAAGTGAT	41	False	NA	56	True	AATAAA	-19	NA	57199938	57197915	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57198296_57198752_57198953_57199761
transcript_97913.known	chr3	+	6069	22	FSM	ENSG00000157500.12	ENST00000288266.8	6069	22	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_8	25.3206197958911	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATACTCTGAACTTT	-27	True	NA	31	True	AATAAA	-35	NA	57227728	57273471	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397_57268488_57269540
transcript_97916.known	chr3	+	516	8	FSM	ENSG00000157500.12	ENST00000444459.1	516	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	121.408233590945	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	18	True	NA	11	True	AATAGA	-15	NA	57227873	57242892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57227938_57230713_57230768_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_97917.nic	chr3	+	557	7	ISM	ENSG00000157500.12	ENST00000482800.5	2217	20	-10	25129	-10	0	5prime_fragment	FALSE	canonical	3	246	junction_3	21.1476292340825	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	23	True	NA	11	True	AATAGA	-15	NA	57227778	57242892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_9792.nnic	chr1	-	718	4	NNC	ENSG00000196754.13	novel	457	3	NA	NA	-778	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.24264068711928	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAATTGCTCAGTGA	NA	False	NA	-3	True	AATAAA	-20	NA	153568668	153561342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_153561592_153563733_153563888_153566701_153566864_153568515
transcript_97920.known	chr3	+	419	4	FSM	ENSG00000157500.12	ENST00000468342.1	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_3	11.8602979164381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAGATGACTAAAGAGG	-17	True	NA	NA	False	AATAAA	-8	NA	57227838	57238205	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044
transcript_97923.nnic	chr3	-	1087	5	NNC	ENSG00000174844.15	novel	746	5	NA	NA	2663	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.58602010819715	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTTGGTGTTATTCTTT	NA	False	NA	NA	False	TATAAA	-6	NA	57306582	57293699	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_57293972_57295524_57295593_57296343_57296436_57296846_57296985_57306065
transcript_97928.nic	chr3	-	579	4	ISM	ENSG00000174844.15	ENST00000311202.7	1555	12	0	24964	0	-24964	5prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTATTTTCTCTTCCC	-1	True	NA	NA	False	AATAAA	-17	NA	57544344	57523463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_57523610_57523802_57523885_57542700_57542904_57544196
transcript_97929.known	chr3	+	8780	3	FSM	ENSG00000174840.9	ENST00000311180.9	8780	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGCCTTTTCAGGACC	-17	True	NA	NA	False	AATAAA	-19	NA	57556273	57566848	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57557688_57559309_57559389_57559561
transcript_9793.nnic	chr1	-	796	4	Fusion	ENSG00000188643.11_ENSG00000196754.13	novel	457	3	NA	NA	-20	0	multi-exon	FALSE	canonical	0	0	junction_2	360.407485432192	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAATTGCTCAGTGA	1	True	NA	-3	True	AATAAA	-20	NA	153613165	153561342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_153561592_153563733_153563888_153607998_153608178_153612951
transcript_97931.known	chr3	+	3040	2	FSM	ENSG00000174840.9	ENST00000487257.1	3040	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTCATCTTTCATTT	-15	True	NA	9	True	AATAAA	-17	NA	57556275	57560937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57557688_57559309
transcript_97940.known	chr3	-	1467	5	FSM	ENSG00000168374.11	ENST00000496292.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_4	809.118501827761	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCCTAATAAAATGATAA	134	False	NA	NA	False	AATACA	-25	NA	57597325	57571391	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57597073
transcript_97942.known	chr3	-	1360	4	FSM	ENSG00000168374.11	ENST00000489843.1	1360	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	845.229883259907	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAATTATTCCTAATAAAA	125	False	NA	NA	False	AATACA	-19	NA	57597334	57571397	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57597073
transcript_97944.known	chr3	+	552	3	FSM	ENSG00000272146.6	ENST00000607782.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTCTTATTTTTAAAAA	477	False	NA	NA	False	AATAAA	-44	NA	57597795	57600927	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57598052_57600058_57600170_57600742
transcript_97945.known	chr3	+	327	3	FSM	ENSG00000272146.6	ENST00000606192.5	327	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAATCTTTCTTATTT	396	False	NA	NA	False	AATAAA	-37	NA	57597714	57600920	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57597753_57600058_57600170_57600742
transcript_97946.known	chr3	+	437	2	FSM	ENSG00000272146.6	ENST00000607297.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAGAGAATCTTTCTT	470	False	NA	NA	False	AATAAA	-33	NA	57597788	57600916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57598052_57600742
transcript_97947.known	chr3	+	588	1	FSM	ENSG00000272146.6	ENST00000658756.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAGGAAGCGGAAAGCC	212	False	NA	NA	False	ATTAAA	-14	NA	57597530	57598118	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57597500_57598100
transcript_97948.known	chr3	-	1596	6	FSM	ENSG00000168374.11	ENST00000303436.11	1596	6	0	0	0	0	multi-exon	TRUE	canonical	3	1658	junction_2	108.899954086308	8305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTTTTTGAG	0	True	NA	NA	False	AATAAA	-17	NA	57597344	57571362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57584383_57584465_57597073
transcript_97949.known	chr3	-	1601	6	FSM	ENSG00000168374.11	ENST00000486310.5	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	737.575216503375	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTTGGAATTATTCCT	10	True	NA	NA	False	AATACA	-12	NA	57597366	57571404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584033_57584383_57584465_57597073
transcript_9795.known	chr1	-	977	3	FSM	ENSG00000196754.13	ENST00000368708.9	977	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATCCACCATCACTATC	-3	True	NA	NA	False	AATAAA	-19	NA	153565844	153561107	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153561592_153563733_153563888_153565505
transcript_97952.known	chr3	+	5639	23	FSM	ENSG00000163681.16	ENST00000659926.1	5639	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	71.4624822101525	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTTATTTAACTTACT	-9	True	NA	NA	False	AAGAAA	-30	NA	57756281	57929328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57756343_57756547_57757850_57831382_57831537_57841298_57841372_57847196_57847234_57849753_57849817_57857732_57857829_57858087_57858160_57860698_57860840_57861948_57862087_57864547_57864717_57871635_57871699_57890040_57890101_57896246_57896372_57896510_57896592_57896872_57896933_57909075_57909151_57912380_57912702_57913157_57913276_57916905_57917078_57922888_57923024_57925844_57925935_57927295
transcript_97953.known	chr3	+	2527	11	FSM	ENSG00000136068.16	ENST00000682987.1	2527	11	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_7	22.3179300115401	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTAATAGCAATAAGCAAA	0	True	NA	NA	False	NA	NA	NA	58008421	58105853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58094835_58094955_58096140_58096219_58097814_58097978_58098710_58098909_58102202_58102341_58103958_58104086_58105079
transcript_97959.known	chr3	+	2198	10	FSM	ENSG00000163686.15	ENST00000478253.6	2198	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	13.7634333930685	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	-18	True	NA	12	True	AATAAA	-23	NA	58237791	58294734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58237917_58249877_58249943_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_9796.known	chr1	-	457	3	FSM	ENSG00000196754.13	ENST00000368709.6	457	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAATTGCTCAGTGA	NA	False	NA	-3	True	AATAAA	-20	NA	153566755	153561342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153561592_153563733_153563888_153566701
transcript_97960.known	chr3	+	2393	9	FSM	ENSG00000163686.15	ENST00000295962.8	2393	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	9.82900681656087	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	3	True	NA	12	True	AATAAA	-23	NA	58237531	58294734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58237917_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_9797.nnic	chr1	-	578	3	NNC	ENSG00000196754.13	novel	457	3	NA	NA	-800	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAATTGCTCAGTGA	NA	False	NA	-3	True	AATAAA	-20	NA	153568690	153561342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_153561592_153563733_153563888_153568515
transcript_97979.known	chr3	+	888	6	FSM	ENSG00000255154.9	ENST00000474660.5	888	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	122.414704999032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGGAAATACAATTGTA	-3	True	NA	NA	False	AATGAA	-20	NA	58306271	58317842	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58310506_58310592_58315721_58315820_58316514_58316592_58316914_58316994_58317439
transcript_97987.known	chr3	+	805	6	FSM	ENSG00000163684.12	ENST00000466547.1	805	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	105.397153661757	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCAGAATTAACAGGGGA	35	True	NA	NA	False	NA	NA	NA	58306309	58317778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58310289_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_97992.known	chr3	+	7985	6	FSM	ENSG00000163684.12	ENST00000445193.7	7985	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	85.8449765565813	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAGGAAACACTGAGTT	-13	True	NA	NA	False	AATAAA	-26	NA	58306261	58324695	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306652_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_97995.known	chr3	+	1378	5	FSM	ENSG00000255154.9	ENST00000481972.5	1378	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	77.7978148793396	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGAAACCCCATCTCT	39	False	NA	NA	False	NA	NA	NA	58306313	58318472	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_98001.known	chr3	+	648	4	FSM	ENSG00000255154.9	ENST00000475412.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	125.523791458919	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTCAGAATTAACAGG	-13	True	NA	NA	False	NA	NA	NA	58306261	58317775	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58316514_58316592_58316914_58316994_58317439
transcript_98008.known	chr3	+	1531	6	FSM	ENSG00000255154.9	ENST00000477305.5	1531	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	122.414704999032	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCATCTCTACCAAAAAAAAA	-3	True	NA	NA	False	NA	NA	NA	58306271	58318484	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58310506_58310592_58315721_58315804_58316497_58316592_58316914_58316994_58317439
transcript_9801.nnic	chr1	-	1132	4	Fusion	ENSG00000188643.11_ENSG00000285867.1	novel	3176	2	NA	NA	-4	-2401	multi-exon	FALSE	canonical	1	1	junction_2	361.803200034985	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCAGTCTTGTCTTTT	-17	True	NA	NA	False	AATAAA	-21	NA	153613141	153589213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_153589877_153606171_153606272_153607998_153608178_153612951
transcript_98010.known	chr3	+	3001	18	FSM	ENSG00000168297.16	ENST00000356151.7	3001	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_16	14.5095124507026	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTCTTATTCTTTTG	-26	True	NA	119	True	AATAGA	-32	NA	58332891	58426127	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58424751
transcript_98014.known	chr3	+	1974	17	FSM	ENSG00000168297.16	ENST00000302779.9	1974	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_16	20.4640500329236	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCTTAAGATCTTGCT	-38	True	NA	-2	True	AATAAA	-14	NA	58332879	58425151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58424751
transcript_98017.nic	chr3	+	1470	15	ISM	ENSG00000168297.16	ENST00000484288.5	2031	18	-16	11361	-3	-4928	5prime_fragment	FALSE	canonical	3	65	junction_14	11.9772318017417	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTTTAGCTCGAAAGG	-23	True	NA	NA	False	AAAAAG	-1	NA	58332894	58409599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531
transcript_9802.nnic	chr1	-	1157	4	Fusion	ENSG00000188643.11_ENSG00000285867.1	novel	3176	2	NA	NA	-4	-2401	multi-exon	FALSE	canonical	1	1	junction_2	361.803200034985	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCAGTCTTGTCTTTT	-17	True	NA	NA	False	AATAAA	-21	NA	153613141	153589213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_153589877_153606171_153606297_153607998_153608178_153612951
transcript_98027.known	chr3	-	1478	9	FSM	ENSG00000168291.13	ENST00000383714.8	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	903.506286295231	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	NA	False	NA	-2	True	AATAAA	-17	NA	58433857	58427629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433767
transcript_9803.nnic	chr1	-	1032	3	Fusion	ENSG00000188643.11_ENSG00000285867.1	novel	3176	2	NA	NA	-4	-2401	multi-exon	FALSE	canonical	1	2	junction_1	383.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCAGTCTTGTCTTTT	-17	True	NA	NA	False	AATAAA	-21	NA	153613141	153589213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_153589877_153607998_153608178_153612951
transcript_98030.known	chr3	-	1507	10	FSM	ENSG00000168291.13	ENST00000302746.11	1507	10	0	0	0	0	multi-exon	FALSE	canonical	3	2576	junction_3	127.357763799464	11987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	1	True	NA	-2	True	AATAAA	-17	NA	58433832	58427629	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_98031.known	chr3	-	1616	10	FSM	ENSG00000168291.13	ENST00000469364.5	1616	10	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	871.120351424915	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAATTTCTAACATG	13	True	NA	7	True	ATTAAA	-42	NA	58433820	58427650	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429942_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_98032.known	chr3	-	1535	9	FSM	ENSG00000168291.13	ENST00000461692.5	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	2576	junction_3	120.525930819886	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATAATATACATTTACT	-6	True	NA	-34	True	ATTAAA	-1	NA	58433839	58427691	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630
transcript_98033.known	chr3	-	581	5	FSM	ENSG00000168291.13	ENST00000482894.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	3	2637	junction_4	130.434610054234	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTGATCCGACCGCCTTG	5	True	NA	NA	False	NA	NA	NA	58433828	58431333	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_98034.known	chr3	+	1759	4	FSM	ENSG00000168301.13	ENST00000490264.1	1759	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	70.6179077068196	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACTAATAAAAAATGAA	5	True	NA	-15	True	NA	NA	NA	58492118	58502327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58492170_58494152_58494409_58498712_58498783_58500945
transcript_98036.known	chr3	+	1555	3	FSM	ENSG00000168301.13	ENST00000404589.8	1555	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	19	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTGTATTTATTGAT	-18	True	NA	14	True	AATAAA	-17	NA	58492095	58502356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58492170_58498712_58498783_58500945
transcript_98039.known	chr3	-	2297	15	FSM	ENSG00000168306.13	ENST00000302819.10	2297	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	10.7069022178238	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	4	True	NA	-2	True	ATTAAA	-14	NA	58537190	58505135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465_58526657_58528793_58528957_58530465_58530639_58531250_58531367_58531692_58531813_58533444_58533553_58533993_58534146_58534359_58534523_58534946_58535198_58537118
transcript_98040.known	chr3	-	1072	6	FSM	ENSG00000168306.13	ENST00000467738.1	1072	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	2.28035085019828	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	49	False	NA	-2	True	ATTAAA	-14	NA	58526749	58505135	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465
transcript_98046.nic	chr3	-	1212	6	ISM	ENSG00000163689.21	ENST00000479931.5	949	8	-328	26156	-3	68	5prime_fragment	FALSE	canonical	3	17	junction_4	5.81033561853358	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGTTTTCTTT	NA	False	NA	NA	False	AAAAAG	-13	NA	59050087	58913501	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
transcript_98048.nnic	chr3	-	1449	5	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6555	-2	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_4	8.61684396980704	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTTTAAACTGCTTC	NA	False	NA	-10	True	AATAAA	-17	NA	58842671	58742009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58842146
transcript_98049.nnic	chr3	-	1153	5	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6586	-2	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	10.256095748383	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTTTAAACTGCTTC	NA	False	NA	-10	True	AATAAA	-17	NA	58842640	58742009	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58842411
transcript_98074.nic	chr3	-	857	4	ISM	ENSG00000189283.10	ENST00000490952.1	1720	6	-93	629458	-18	78742	5prime_fragment	FALSE	canonical	0	0	junction_1	10.2089285540757	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAACTGTTGTCGAGAA	4676	False	NA	NA	False	AAAAAG	-6	NA	61251477	61165267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_61165829_61166972_61167043_61200616_61200666_61251300
transcript_98077.nnic	chr3	-	767	4	NNC	ENSG00000189283.10	novel	3116	10	NA	NA	-18	265193	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.0855260988773	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCACCCTACCTTCCTTT	4676	False	NA	NA	False	AATAAA	-17	NA	61251477	60978816	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_60979305_61042046_61042100_61200616_61200666_61251300
transcript_98078.nnic	chr3	-	431	3	NNC	ENSG00000189283.10	novel	3116	10	NA	NA	-18	130860	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCTGTAGTCCCAGTTACT	4676	False	NA	NA	False	AATAAA	-26	NA	61251477	61113149	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_61113355_61200616_61200666_61251300
transcript_98079.known	chr3	-	652	1	FSM	ENSG00000226360.5	ENST00000472730.1	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4892	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACATTTGAATAAATTCT	27	False	NA	NA	False	NA	NA	NA	61743106	61742454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_61742500_61743100
transcript_98085.known	chr3	-	2682	6	FSM	ENSG00000241472.7	ENST00000652980.1	2682	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.1923060660269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTACATTAAACATAAT	1	True	NA	NA	False	NA	NA	NA	62318892	62261850	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62292613_62292718_62294699_62294779_62317105_62317193_62317807_62317901_62318865
transcript_98097.nnic	chr3	-	613	6	NNC	ENSG00000241472.7	novel	2187	5	NA	NA	2	-1795	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	20.0658914578944	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGATCCTCACTGTTTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	62318958	62278569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62278727_62292613_62292718_62294699_62294779_62317105_62317193_62317807_62317901_62318865
transcript_98099.known	chr3	-	2661	5	FSM	ENSG00000241472.7	ENST00000474795.5	2661	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.783020910792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGTTGTCTTTTATA	NA	False	NA	NA	False	ATTAAA	-15	NA	62318947	62261822	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62294699_62294779_62317105_62317193_62317807_62317901_62318865
transcript_9810.known	chr1	-	956	3	FSM	ENSG00000188643.11	ENST00000368705.2	956	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	409.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTCCCTCCCTGGGGG	6978	False	NA	NA	False	NA	NA	NA	153609344	153607361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153607693_153607998_153608178_153608898
transcript_98100.known	chr3	-	2849	5	FSM	ENSG00000241472.7	ENST00000668824.1	2849	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	22.2766694099455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCAGCTGTCCATTTA	-4	True	NA	NA	False	NA	NA	NA	62318940	62261630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62294699_62294779_62317105_62317193_62317807_62317904_62318865
transcript_98103.known	chr3	-	2556	4	FSM	ENSG00000241472.7	ENST00000462497.5	2556	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	25.5255862921022	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAACTGGTTGTCTTTTA	13	False	NA	NA	False	ATTAAA	-13	NA	62318923	62261824	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62317105_62317193_62317807_62317901_62318865
transcript_98106.nnic	chr3	-	528	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	26.2339898266013	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	13	False	NA	NA	False	AATAAA	-16	NA	62318923	62315808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317193_62317807_62317901_62318651
transcript_98107.nnic	chr3	-	349	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	2	-21536	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	20.6774165590278	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	NA	False	NA	NA	False	AATAAA	-16	NA	62318958	62315808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317193_62317807_62317901_62318865
transcript_98108.nnic	chr3	-	352	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	2	-21536	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	21.7460085737335	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	NA	False	NA	NA	False	AATAAA	-16	NA	62318958	62315808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317193_62317807_62317904_62318865
transcript_9811.known	chr1	-	1146	3	FSM	ENSG00000188643.11	ENST00000368704.5	1146	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	405	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-5	True	NA	-6	True	ATTAAA	-21	NA	153609337	153606885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153607693_153607998_153608178_153609177
transcript_98110.nnic	chr3	-	326	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	-5	-21536	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	9.41629792788369	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-4	True	NA	NA	False	AATAAA	-16	NA	62318897	62315808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317231_62317807_62317901_62318865
transcript_98111.nnic	chr3	-	329	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	-5	-21536	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	7.25718035235908	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-4	True	NA	NA	False	AATAAA	-16	NA	62318897	62315808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317231_62317807_62317904_62318865
transcript_98112.known	chr3	-	2758	6	FSM	ENSG00000241472.7	ENST00000664758.1	2758	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.6225669551756	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACATTAAACATAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	62318960	62261845	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62292613_62292718_62294699_62294779_62317105_62317193_62317807_62317904_62318865
transcript_98115.known	chr3	+	3369	6	FSM	ENSG00000114405.11	ENST00000462069.6	3369	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	38.2287849663052	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	14	True	NA	NA	False	ATTAAA	-16	NA	62319021	62336213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_98118.known	chr3	+	3525	6	FSM	ENSG00000114405.11	ENST00000494481.5	3525	6	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	104.03768547983	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	-5	True	NA	NA	False	ATTAAA	-16	NA	62319042	62336213	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319233_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_98119.known	chr3	+	582	5	FSM	ENSG00000114405.11	ENST00000486169.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	102.541455031611	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTACACTTGGGGAGG	7	True	NA	NA	False	AATAAA	-40	NA	62319014	62324133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62323893
transcript_98120.known	chr3	+	690	5	FSM	ENSG00000114405.11	ENST00000232519.9	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	109.909906286922	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	14	True	NA	12	True	ATTAAA	-24	NA	62319021	62333646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319056_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_98124.known	chr3	+	768	5	FSM	ENSG00000114405.11	ENST00000542214.2	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_3	9.36416040016402	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	10	False	NA	12	True	ATTAAA	-24	NA	62319720	62333646	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_98125.known	chr3	-	3033	2	FSM	ENSG00000163618.18	ENST00000486172.1	3033	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTGGGTCTGTCTTCC	NA	False	NA	NA	False	AATAAA	-22	NA	62404875	62398347	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62399586_62403080
transcript_98129.known	chr3	+	1957	9	FSM	ENSG00000244342.5	ENST00000468072.1	1957	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.2806997013391	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	41	False	NA	15	True	AATAAA	-17	NA	62950470	63125062	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62950519_62952006_62952084_63102691_63102800_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
transcript_98135.nic	chr3	+	2126	2	ISM	ENSG00000163630.11	ENST00000450542.6	1004	5	-41	335009	-31	-276122	5prime_fragment	FALSE	canonical	3	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTTTTTTACCTCA	149	False	NA	NA	False	NA	NA	NA	63278276	63280527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_63278552_63278676
transcript_9814.known	chr1	-	1172	3	FSM	ENSG00000188643.11	ENST00000368706.9	1172	3	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_2	38.5	4562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-13	True	NA	-6	True	ATTAAA	-21	NA	153613137	153606885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153607693_153607998_153608178_153612951
transcript_98147.nnic	chr3	-	1048	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95631	515	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	11.4406682011537	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCACTTTTATTCCA	NA	False	NA	-19	True	AATAAA	-14	NA	63645682	63423080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63423766_63426685_63426807_63549977_63550052_63645514
transcript_98154.nnic	chr3	-	361	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95586	-43039	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	6.59966329107444	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTAGTATTTTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	63645637	63466634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63466735_63549977_63550052_63588980_63589045_63645514
transcript_98155.nnic	chr3	-	306	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95550	-43039	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	6.37704215656966	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTAGTATTTTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	63645601	63466634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63466735_63549977_63550052_63598720_63598766_63645514
transcript_98157.nnic	chr3	-	1202	3	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95571	-2191	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	14	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTCTATTTCCATAA	NA	False	NA	NA	False	ACTAAA	-9	NA	63645622	63425786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63426807_63549977_63550052_63645514
transcript_98159.nnic	chr3	-	342	3	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95631	-43039	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	9	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTAGTATTTTGTTA	NA	False	NA	-1	True	AATAAA	-19	NA	63645682	63466634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63466735_63549977_63550052_63645514
transcript_9817.known	chr1	-	1218	5	FSM	ENSG00000189334.9	ENST00000368702.5	1218	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	139.088101575944	5270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	9977	False	NA	-9	True	AATAAA	-21	NA	153616986	153614254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294_153616356_153616852
transcript_98171.known	chr3	-	836	7	FSM	ENSG00000163634.12	ENST00000469584.5	836	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_6	238.782792977681	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTGTGCTCATTAAT	611	False	63863900	-17	True	AATAAA	-16	NA	63863868	63833870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63863771
transcript_98172.known	chr3	-	738	6	FSM	ENSG00000163634.12	ENST00000498422.5	738	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	286.048527351567	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTATTCGCATATATATT	693	False	NA	NA	False	ATTAAA	-16	NA	63863786	63835326	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863503
transcript_98173.known	chr3	-	892	8	FSM	ENSG00000163634.12	ENST00000295899.10	892	8	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_7	99.6155876664011	5028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGTGCTCATTAATA	30	True	NA	-16	True	AATAAA	-17	NA	63863805	63833869	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863771
transcript_98174.known	chr3	-	1495	9	FSM	ENSG00000163636.11	ENST00000492933.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	519.221532681379	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-5	True	NA	-20	True	AATAAA	-18	NA	64023472	64010554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64022642_64022802_64023274
transcript_98178.known	chr3	-	1176	8	FSM	ENSG00000163636.11	ENST00000482510.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	433.249327283767	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATAAATACTGCAT	9	True	NA	-49	True	NA	NA	NA	64023458	64010583	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023391
transcript_98179.known	chr3	-	1362	8	FSM	ENSG00000163636.11	ENST00000295901.9	1362	8	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_7	132.54048284142	4888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-27	True	NA	-16	True	AATAAA	-22	NA	64023494	64010550	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023274
transcript_9818.known	chr1	-	1080	4	FSM	ENSG00000189334.9	ENST00000368701.5	1080	4	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	147.359726142827	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	8257	False	NA	-9	True	AATAAA	-21	NA	153616289	153614254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616232
transcript_98180.known	chr3	-	2052	7	FSM	ENSG00000163636.11	ENST00000476464.5	2052	7	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_1	51.2466801092736	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	30	True	NA	-20	True	AATAAA	-18	NA	64023437	64010554	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317
transcript_98183.nic	chr3	-	1685	5	ISM	ENSG00000151276.24	ENST00000460329.6	3694	22	-325	91717	-325	0	5prime_fragment	TRUE	canonical	0	0	junction_4	73.0530629063559	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	-4	True	NA	NA	False	AATGAA	-13	NA	65598211	65452581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
transcript_98187.known	chr3	-	2247	6	FSM	ENSG00000151276.24	ENST00000464060.5	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	51.9869214322218	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	16	True	NA	NA	False	AATGAA	-13	NA	66038834	65452581	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_65453341_65470282_65470488_65478591_65478799_65493511_65493632_65621971_65622089_66037995
transcript_9819.known	chr1	-	435	4	FSM	ENSG00000189334.9	ENST00000469571.1	435	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	160.555286428071	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCTGGAGAGGCCTGT	10004	False	NA	NA	False	NA	NA	NA	153616927	153614917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616852
transcript_98200.known	chr3	+	2035	10	FSM	ENSG00000144741.19	ENST00000354883.11	2035	10	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	38.0292285252044	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTCCCTCTTTCACA	-1	True	NA	NA	False	AATAAA	-18	NA	66221000	66378923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_98217.known	chr3	+	1023	9	FSM	ENSG00000144741.19	ENST00000336733.10	1023	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	72.1577048900532	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	10	True	NA	27	True	AATAAA	-18	NA	66221011	66378079	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_9824.known	chr1	-	1025	3	FSM	ENSG00000189334.9	ENST00000476873.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	4.5	3103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	8608	False	NA	-9	True	AATAAA	-21	NA	153615938	153614254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153615023_153615234_153615382_153615828
transcript_9825.known	chr1	-	1054	4	FSM	ENSG00000189334.9	ENST00000344616.4	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	49.8687165354081	5149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-3	True	NA	-9	True	AATAAA	-21	NA	153616325	153614254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294
transcript_98255.known	chr3	+	4680	4	FSM	ENSG00000163376.11	ENST00000417314.2	4680	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	9.17726659862414	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGTGTTGCAAAGTGA	-10	True	NA	18	True	AATAAA	-19	NA	66998306	67011210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66998372_66998980_66999192_67003194_67004310_67007921
transcript_98256.known	chr3	+	568	2	FSM	ENSG00000163376.11	ENST00000484414.5	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGGAAGATACCTTTATA	-10	True	NA	NA	False	NA	NA	NA	66998306	67003697	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66998372_67003194
transcript_98260.known	chr3	-	2350	11	FSM	ENSG00000172340.15	ENST00000307227.10	2350	11	0	0	0	0	multi-exon	TRUE	canonical	3	476	junction_4	39.81155611126	1671	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTGTATCTCTCAT	-10	True	NA	-1	True	AATAAA	-22	NA	67654612	67374718	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_67375860_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
transcript_98263.known	chr3	+	3894	6	FSM	ENSG00000241316.8	ENST00000656446.1	3894	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.0976176963403	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGATACATCATGTTTG	214	False	NA	NA	False	CATAAA	-37	NA	67654966	67753596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67669815_67669910_67670828_67671005_67746770_67746958_67749852_67749971_67750413
transcript_98265.known	chr3	+	2715	6	FSM	ENSG00000241316.8	ENST00000659899.1	2715	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.24499443206436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTAAGTGACAATATCC	NA	False	NA	NA	False	TTTAAA	-7	NA	67654711	67752215	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67669815_67669910_67670881_67671005_67746770_67746958_67749852_67749971_67750413
transcript_98273.known	chr3	+	2558	4	FSM	ENSG00000241316.8	ENST00000659205.1	2558	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.24721912892465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTTGGAATATATAAAGA	-21	True	NA	NA	False	ATTAAA	-41	NA	67654731	67752295	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67746770_67746958_67749852_67749971_67750413
transcript_98276.known	chr3	+	2290	4	FSM	ENSG00000241316.8	ENST00000662687.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAAATGGTATTATTAC	-1	True	NA	NA	False	AGTAAA	-16	NA	67654751	67748439	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67669815_67669910_67670828_67671005_67746770
transcript_98277.known	chr3	+	2336	4	FSM	ENSG00000241316.8	ENST00000464420.6	2336	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGGAAATAAATAAATG	NA	False	NA	NA	False	AGTAAA	-40	NA	67654676	67748463	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67669815_67669910_67670881_67671005_67746770
transcript_98283.known	chr3	+	2063	2	FSM	ENSG00000241316.8	ENST00000671174.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATAAATAAATGTAAAT	-15	True	NA	NA	False	AGTAAA	-45	NA	67654737	67748468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67746770
transcript_98289.known	chr3	-	2229	6	FSM	ENSG00000163377.16	ENST00000295569.12	2229	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.3231850475024	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-3	True	NA	-3	True	AGTAAA	-23	NA	68932547	68731765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_98290.nic	chr3	-	2147	6	NIC	ENSG00000163377.16	novel	2229	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	17.4585222742362	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-3	True	NA	-3	True	AGTAAA	-23	NA	68932547	68731765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932321
transcript_98291.nnic	chr3	-	2107	6	NNC	ENSG00000163377.16	novel	2229	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.6567267634746	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-4	True	NA	-3	True	AGTAAA	-23	NA	68932548	68731765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932362
transcript_98292.nnic	chr3	-	2223	6	NNC	ENSG00000163377.16	novel	2229	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	10.5375518978556	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	NA	False	NA	-3	True	AGTAAA	-23	NA	68932582	68731765	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_68733154_68739115_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_98294.nnic	chr3	-	2084	6	NNC	ENSG00000163377.16	novel	2229	6	NA	NA	-14	-139	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	10.5375518978556	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGTTTATAGCCTAACA	NA	False	NA	-16	True	AATAAA	-8	NA	68932582	68731904	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_68733154_68739115_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_98313.known	chr3	-	2111	18	FSM	ENSG00000144744.17	ENST00000361055.9	2111	18	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_17	77.6893824046008	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	5	True	NA	-26	True	AATAAA	-16	NA	69080365	69054729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080111_69080154_69080333
transcript_98319.known	chr3	-	4867	17	FSM	ENSG00000144747.17	ENST00000646708.1	4867	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_15	18.8973377754646	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTGGCGTGGTGGTGT	-7	True	NA	NA	False	AATACA	-5	NA	69052333	69021847	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69023321_69024054_69024181_69025559_69025713_69025995_69026098_69027899_69027993_69028225_69028296_69029814_69030008_69033547_69033705_69035022_69035116_69038563_69038721_69038842_69039010_69039550_69039694_69042806_69042913_69043749_69043877_69044491_69044596_69047348_69048563_69051944
transcript_98321.known	chr3	-	2112	17	FSM	ENSG00000144744.17	ENST00000349511.8	2112	17	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_16	191.921034787097	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	NA	False	NA	-26	True	AATAAA	-16	NA	69080408	69054729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080333
transcript_98335.known	chr3	-	2004	16	FSM	ENSG00000144744.17	ENST00000415609.6	2004	16	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	277.940441261953	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-11	True	NA	-26	True	AATAAA	-16	NA	69080381	69054729	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69077797_69077919_69080333
transcript_98363.known	chr3	-	652	3	FSM	ENSG00000144744.17	ENST00000485424.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_2	71	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAGTGTTCACTTATAT	7	True	NA	NA	False	AATAGA	-35	NA	69080363	69077338	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69077919_69080111_69080154_69080333
transcript_98368.known	chr3	-	222	2	FSM	ENSG00000144747.17	ENST00000477872.1	222	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCAACTAGCCTGCAA	7740	False	NA	NA	False	NA	NA	NA	69044628	69043791	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69043877_69044491
transcript_98370.known	chr3	+	2134	3	FSM	ENSG00000144746.7	ENST00000273258.4	2134	3	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_2	19	816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTCTTAAATACCTGA	-3	True	NA	30	True	AATAAA	-41	NA	69084936	69106092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_69085224_69101838_69102057_69104463
transcript_98373.nic	chr3	-	872	3	NIC	ENSG00000114541.15	novel	777	3	NA	NA	208	68	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	12	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGCATAAGTTTTGGTT	340	False	NA	2	True	AATAAA	-27	NA	69542375	69333892	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_69334467_69432633_69432762_69542205
transcript_98374.known	chr3	+	4799	10	FSM	ENSG00000187098.18	ENST00000352241.9	4799	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	3.46410161513775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGTGGCCTATTGTG	2	True	NA	3	True	ATTAAA	-16	NA	69739463	69968332	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_69739702_69879133_69879384_69937821_69938050_69939097_69939182_69941235_69941332_69949050_69949169_69951811_69951887_69956454_69956531_69959272_69959421_69964846
transcript_98375.known	chr3	+	4767	10	FSM	ENSG00000187098.18	ENST00000642352.1	4767	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.87174399629335	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCCTATTGTGTTAA	20	True	NA	7	True	ATTAAA	-20	NA	69739481	69968336	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_69739702_69879133_69879384_69937821_69938050_69939097_69939182_69941235_69941332_69949050_69949169_69951829_69951887_69956454_69956531_69959272_69959421_69964846
transcript_98379.nnic	chr3	+	729	3	Fusion	ENSG00000240405.7_ENSG00000287669.1	novel	1516	4	NA	NA	105335	-443	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATGAAGAGAGAATGA	NA	False	NA	NA	False	CATAAA	-20	NA	70438074	70619882	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_70438208_70462559_70462663_70619389
transcript_98389.nic	chr3	-	834	3	ISM	ENSG00000114861.24	ENST00000649431.2	1596	12	3	219965	3	89	5prime_fragment	FALSE	canonical	0	0	junction_1	5.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAAAAGAGTAGATGA	-15	True	NA	NA	False	AATAAA	-2	NA	71306050	71197792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_71198393_71299819_71299881_71305877
transcript_98390.known	chr3	-	560	3	FSM	ENSG00000114861.24	ENST00000470112.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAGAGTCATAAATAAC	20	True	NA	NA	False	AATGAA	-28	NA	71306015	71296084	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_71296446_71299819_71299881_71305877
transcript_98393.known	chr3	-	692	6	ISM	ENSG00000114861.24	ENST00000649431.2	1596	12	0	74775	0	1115	5prime_fragment	FALSE	canonical	0	0	junction_2	4.31740662898458	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACAGGAACAGTTGCA	-18	True	NA	NA	False	TATAAA	-1	NA	71306053	71052602	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_71052627_71053635_71053774_71112535_71112638_71198201_71198393_71299819_71299881_71305877
transcript_98394.known	chr3	+	820	3	FSM	ENSG00000277855.1	ENST00000613067.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCAAATTTCGGCGGT	NA	False	NA	NA	False	NA	NA	NA	71581720	71628558	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_71581778_71627640_71627785_71627939
transcript_98395.known	chr3	-	9978	7	FSM	ENSG00000163412.13	ENST00000425534.8	9978	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_6	13.8413631313297	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTCTGTCTCACT	-2	True	NA	NA	False	ATTAAA	-16	NA	71725402	71675413	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71725191
transcript_98397.known	chr3	-	1555	4	FSM	ENSG00000163421.9	ENST00000295619.4	1555	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGTTGTCAGTTTTTAT	-1	True	NA	-1	True	NA	NA	NA	71785148	71771654	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_71772829_71774444_71774508_71781466_71781593_71784956
transcript_98400.known	chr3	-	1755	8	FSM	ENSG00000241163.9	ENST00000665453.1	1755	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.925820099772551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGCCTTGAAATCGTC	1163	False	NA	NA	False	AATAAA	-24	NA	72100901	72035754	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72036174_72036324_72036521_72055860_72055963_72059686_72060110_72060509_72060612_72060802_72061095_72099903_72100011_72100787
transcript_98404.known	chr3	-	2057	3	FSM	ENSG00000241163.9	ENST00000668763.1	2057	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTTGCAATTTTGCC	1107	False	NA	NA	False	ATTAAA	-25	NA	72100957	72097231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72099012_72099903_72100011_72100787
transcript_98408.known	chr3	+	1448	2	FSM	ENSG00000287595.2	ENST00000659534.1	1448	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTACTGTTTGAAGCAG	8	True	NA	NA	False	AATAAA	-3	NA	72738917	72740525	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_72739035_72739194
transcript_98410.known	chr3	-	2846	11	FSM	ENSG00000144736.14	ENST00000325599.13	2846	11	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_10	19.6888293202008	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGTGGACGTATGC	-9	True	NA	-12	True	AATAAA	-25	NA	72848445	72749276	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_98414.nic	chr3	-	1801	9	NIC	ENSG00000144736.14	novel	502	5	NA	NA	-10	664	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	58.8885334763908	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAGAGGAGAGGAAA	NA	False	NA	NA	False	AGTAAA	-42	NA	72848482	72813832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_72814556_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_98420.known	chr3	+	1679	1	FSM	ENSG00000255423.1	ENST00000533473.1	1679	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCCAGGTGTGGTGGCT	82	False	NA	NA	False	TTTAAA	-17	NA	73061658	73063337	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_73061700_73063300
transcript_98421.known	chr3	+	4957	9	FSM	ENSG00000163605.15	ENST00000356692.10	4957	9	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_7	65.4072578159335	1386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTGTGTAATTATT	-22	True	NA	25	True	AATAAA	-16	NA	72996810	73069198	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851_73065142_73065396
transcript_98423.nnic	chr3	+	488	2	NNC	ENSG00000287398.1	novel	790	3	NA	NA	-17	-25724	at_least_one_novel_splicesite	FALSE	canonical	3	719	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGATTTGCTTTTGTAA	NA	False	NA	NA	False	NA	NA	NA	75214492	75215046	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_75214556_75214621
transcript_98451.nnic	chr3	+	447	4	NIC	ENSG00000272690.6	novel	872	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	9.41629792788369	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGGATGAGTTATCTTG	NA	False	NA	7	True	AATAAA	-18	NA	75435295	75452653	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_75435414_75443507_75443647_75446467_75446536_75452531
transcript_98453.nnic	chr3	+	1284	4	NIC	ENSG00000272690.6	novel	1319	7	NA	NA	-2	561	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	9.7410927974683	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGTTGCCAGTGCAGATC	NA	False	NA	NA	False	AATAAA	-18	NA	75435295	75538590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_75435414_75443507_75443647_75446467_75446536_75537631
transcript_98454.known	chr3	+	532	4	FSM	ENSG00000272690.6	ENST00000659018.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	8.04155872120988	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAGGATGAGTTATCT	NA	False	NA	5	True	AATAAA	-16	NA	75435333	75452651	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75435414_75443507_75443647_75451209_75451403_75452531
transcript_98457.nnic	chr3	+	606	4	NNC	ENSG00000272690.6	novel	1126	8	NA	NA	0	-14290	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGAGATTTGGAGTGA	NA	False	NA	4	True	AATAAA	-16	NA	75435307	75523652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_75435414_75439784_75439847_75443507_75443647_75523353
transcript_98465.nnic	chr3	+	381	3	NIC	ENSG00000272690.6	novel	835	7	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	9	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGATGAGTTATCTTGCT	NA	False	NA	9	True	AATAAA	-20	NA	75435295	75452655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_75435414_75443507_75443647_75452531
transcript_98466.nnic	chr3	+	556	3	NNC	ENSG00000272690.6	novel	1089	3	NA	NA	-2	-14290	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	8.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGAGATTTGGAGTGA	NA	False	NA	4	True	AATAAA	-16	NA	75435295	75523652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_75435414_75443507_75443647_75523353
transcript_98467.nnic	chr3	+	1214	3	NIC	ENSG00000272690.6	novel	1089	3	NA	NA	-2	559	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	10	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCGTTGCCAGTGCAGA	NA	False	NA	NA	False	AATAAA	-16	NA	75435295	75538588	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_75435414_75443507_75443647_75537631
transcript_98470.known	chr3	+	705	4	FSM	ENSG00000272690.6	ENST00000656118.1	705	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGGATGAGTTATCTT	29	False	NA	6	True	AATAAA	-17	NA	75436100	75452652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75436353_75443507_75443647_75451209_75451403_75452531
transcript_98471.known	chr3	+	1089	3	FSM	ENSG00000272690.6	ENST00000654265.1	1089	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	11.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTGACTGAGTAATTA	NA	False	NA	NA	False	AATAAA	-15	NA	75435333	75457486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75435414_75443507_75443647_75456616
transcript_98473.nnic	chr3	+	460	2	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGAGATTTGGAGTGA	NA	False	NA	4	True	AATAAA	-16	NA	75501867	75523652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_+_75502029_75523353
transcript_98474.nnic	chr3	+	608	4	NNC	ENSG00000272690.6	novel	1109	4	NA	NA	2	5252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10.2089285540757	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTTCTTTGCATTT	NA	False	NA	NA	False	AATAAA	-13	NA	75435309	75543281	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_75435414_75443507_75443647_75542413_75542614_75543116
transcript_98478.known	chr3	-	201	2	FSM	ENSG00000272710.2	ENST00000608389.1	201	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGTTCCTGGCTGCA	NA	False	NA	0	True	TATAAA	-22	NA	75579999	75540048	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75540228_75579977
transcript_98482.known	chr3	-	1138	3	FSM	ENSG00000243422.3	ENST00000638439.1	1138	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCCGGAGTTAAGAATAT	-1	True	NA	NA	False	TATAAA	-15	NA	75670156	75624274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75625154_75630079_75630202_75670019
transcript_98490.nnic	chr3	-	1223	2	FSM	ENSG00000243422.3	ENST00000686530.1	1020	2	-12	-191	-12	191	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATCTGTGTATTACCA	1902	False	NA	NA	False	AATAAA	-17	NA	75670168	75667351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75668426_75670019
transcript_98491.nnic	chr3	-	1028	2	FSM	ENSG00000243422.3	ENST00000686530.1	1020	2	-12	4	-12	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTATATTGTTATTTA	1902	False	NA	-3	True	AATAAA	-16	NA	75670168	75667546	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75668426_75670019
transcript_98492.known	chr3	+	1344	6	FSM	ENSG00000242516.3	ENST00000463183.2	1344	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.56417109729742	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	102	False	NA	30	True	AATAAA	-34	NA	75672390	75679314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75675967_75676129_75678832
transcript_98496.known	chr3	+	1767	5	FSM	ENSG00000242516.3	ENST00000669013.1	1767	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	13.8991906239176	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTGTATAATGACTT	296	False	NA	21	True	TATAAA	-17	NA	75672584	75680092	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75678832
transcript_98498.known	chr3	+	880	5	FSM	ENSG00000242516.3	ENST00000662338.1	880	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.75925291729789	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	406	False	NA	30	True	AATAAA	-34	NA	75672694	75679314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75675967_75676129_75678832
transcript_98500.nic	chr3	+	1074	4	ISM	ENSG00000242516.3	ENST00000662338.1	880	5	-21	2531	-10	158	5prime_fragment	FALSE	canonical	2	4	junction_3	7.58653778449403	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAACACAGTTTTATGTC	385	False	NA	NA	False	NA	NA	NA	75672673	75676783	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_75672770_75673193_75673239_75675763_75675881_75675967
transcript_98501.known	chr3	+	716	4	FSM	ENSG00000242516.3	ENST00000665741.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.93310961716756	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	395	False	NA	16	True	AATAAA	-20	NA	75672683	75679300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75678832
transcript_98503.known	chr3	+	822	4	FSM	ENSG00000242516.3	ENST00000666754.1	822	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.29983164553722	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	419	False	NA	30	True	AATAAA	-34	NA	75672707	75679314	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75675763_75675881_75675967_75676129_75678832
transcript_98505.nnic	chr3	+	599	3	NIC	ENSG00000242516.3	novel	716	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	9	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	395	False	NA	16	True	AATAAA	-20	NA	75672683	75679300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_75672770_75673193_75673239_75678832
transcript_98508.known	chr3	+	671	3	FSM	ENSG00000242516.3	ENST00000656252.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	15	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	395	False	NA	16	True	AATAAA	-20	NA	75672683	75679300	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75675763_75675881_75678832
transcript_98511.nic	chr3	+	1589	2	ISM	ENSG00000185008.17	ENST00000332191.12	5437	27	-780	548411	64	492	5prime_fragment	FALSE	canonical	1	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATCCGGGCATGGTGGC	107	False	NA	NA	False	AATACA	-14	NA	77039949	77098705	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_77040847_77098013
transcript_98512.known	chr3	+	5919	27	FSM	ENSG00000185008.17	ENST00000487694.7	5919	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.43838409825031	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTCCTGCCTCATT	16	False	NA	NA	False	AATAAA	-24	NA	75906694	77647510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75906961_75937480_75937603_77098013_77098341_77477413_77477572_77481098_77481220_77493243_77493383_77522774_77522903_77546337_77546463_77550817_77550990_77557943_77558150_77562650_77562733_77563166_77563330_77564953_77565121_77568312_77568435_77574498_77574731_77577489_77577615_77579946_77580119_77588750_77588934_77595141_77595185_77596622_77596751_77602209_77602492_77607797_77607955_77617512_77617774_77622226_77622433_77634869_77635044_77644703_77644905_77646053
transcript_98514.nic	chr3	-	1586	3	ISM	ENSG00000169855.21	ENST00000495273.5	5600	29	-415	147978	29	-53778	5prime_fragment	FALSE	canonical	3	181	junction_1	6.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTAGATTATTTTCAAT	-6	True	NA	NA	False	AAAAAG	-8	NA	79019430	78746665	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_78746901_78938600_78938928_79018406
transcript_98515.known	chr3	-	2941	16	FSM	ENSG00000114480.13	ENST00000429644.7	2941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.065364533659	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTGCTAATGTTTAT	3	True	NA	-5	True	AATAAA	-15	NA	81761645	81489702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_81490464_81499109_81499228_81535194_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_98518.nic	chr3	-	2129	14	ISM	ENSG00000114480.13	ENST00000429644.7	2941	16	7	45418	7	-454	5prime_fragment	FALSE	canonical	3	44	junction_7	9.4066575945227	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTAAGGTTGATCTTG	10	True	NA	NA	False	NA	NA	NA	81761638	81535120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_98521.nic	chr3	+	893	3	NIC	ENSG00000175161.14	novel	1006	2	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATCAACACATTGACTT	32	True	NA	2	True	ATTAAA	-14	NA	84959020	84960438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_84959493_84959589_84959669_84960096
transcript_98523.known	chr3	+	1006	2	FSM	ENSG00000175161.14	ENST00000485126.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATCAACACATTGACTT	16	True	NA	2	True	ATTAAA	-14	NA	84959004	84960438	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_84959669_84960096
transcript_98525.nnic	chr3	+	1621	2	NNC	ENSG00000175161.14	novel	1006	2	NA	NA	16	82113	intron_retention	FALSE	canonical	3	18	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCGGGTTTCATTTCTTT	32	True	NA	13	True	AATAAA	-16	NA	84959020	85042551	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_84959669_85041578
transcript_98526.nnic	chr3	+	461	3	Antisense	novelGene_ENSG00000206538.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTCAGTCTTGGTACTT	NA	False	NA	NA	False	AATAAA	-15	NA	86876986	86883006	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_86877148_86880084_86880190_86882811
transcript_98529.nnic	chr3	+	447	2	Antisense	novelGene_ENSG00000206538.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTTTGGGTATTTC	NA	False	NA	NA	False	AGTAAA	-17	NA	86876986	86880370	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_86877148_86880084
transcript_98532.nnic	chr3	+	1569	2	Antisense	novelGene_ENSG00000206538.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTATTATGTTGAAT	NA	False	NA	NA	False	AATAAA	-29	NA	86876986	86881492	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_86877148_86880084
transcript_98535.known	chr3	+	2644	7	FSM	ENSG00000083937.10	ENST00000676705.1	2644	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.871664578939	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTTACCTTTTT	11	True	NA	24	True	AATAAA	-14	NA	87227311	87255486	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87227557_87240326_87240454_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_98538.known	chr3	+	1175	6	FSM	ENSG00000083937.10	ENST00000494980.5	1175	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	194.174766640776	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCTTGTCTTTTGTA	1	True	NA	19	True	ATTAAA	-21	NA	87227301	87254224	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87227557_87240698_87240791_87245713_87245819_87249874_87249978_87253403_87253511_87253711
transcript_98542.known	chr3	+	2590	6	FSM	ENSG00000083937.10	ENST00000263780.9	2590	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_3	23.2671442166846	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAAGAATGATCTT	8	True	NA	94	True	ATTAAA	-22	NA	87227308	87255556	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_98546.known	chr3	+	2528	5	FSM	ENSG00000083937.10	ENST00000471660.5	2528	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	193.089843078293	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTTTCAAAAGA	-30	True	NA	86	True	ATTAAA	-14	NA	87227270	87255548	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87227557_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_98550.known	chr3	+	3386	3	FSM	ENSG00000179097.7	ENST00000319595.7	3386	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAATGGATCTGTCT	-2	True	NA	NA	False	AAAAAG	-4	NA	87792705	87993839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87792843_87822007_87822125_87990707
transcript_98553.known	chr3	+	1377	7	FSM	ENSG00000175105.8	ENST00000473136.4	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	8.78287475083693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATTTGCAAATAAACTT	8	True	NA	NA	False	NA	NA	NA	88059273	88135498	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133_88126270_88128808_88129012_88129686_88129827_88135060
transcript_98556.known	chr3	-	4548	4	FSM	ENSG00000163320.12	ENST00000482016.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	391.091634616066	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATCTTACTGAGTTAT	-24	True	NA	45	True	AATATA	-19	NA	88059005	88051949	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88056000_88057190_88057293_88058018_88058224_88058814
transcript_98557.nic	chr3	+	965	4	ISM	ENSG00000175105.8	ENST00000473136.4	1377	7	-63	8923	-44	-2480	5prime_fragment	FALSE	canonical	3	32	junction_3	7.1336448530109	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTTTTTTTTTTTTT	1046	False	NA	NA	False	ATTAAA	-18	NA	88059210	88126575	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133
transcript_98567.known	chr3	-	556	3	FSM	ENSG00000163320.12	ENST00000467332.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGAAAATGTGCCTGGAA	56	False	NA	NA	False	NA	NA	NA	88149815	88055657	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88056000_88140969_88141079_88149710
transcript_98568.known	chr3	-	961	3	FSM	ENSG00000163320.12	ENST00000675130.1	961	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	380.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCTCACTGCAAAACTTA	616	False	NA	79	True	NA	NA	NA	88058451	88055322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88056000_88058018_88058224_88058372
transcript_98569.known	chr3	-	4495	3	FSM	ENSG00000163320.12	ENST00000309534.10	4495	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	92.5	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGAGTTATTTTTCT	-1	True	NA	51	True	AATATA	-25	NA	88059048	88051943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88056000_88058018_88058224_88058814
transcript_98575.nic	chr3	+	483	2	ISM	ENSG00000175105.8	ENST00000473136.4	1377	7	-63	49054	-44	-42611	5prime_fragment	TRUE	canonical	3	49	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGAGAATTTGTTTT	1046	False	NA	NA	False	TATAAA	-18	NA	88059210	88086444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_88059506_88086256
transcript_98576.known	chr3	-	717	2	FSM	ENSG00000163320.12	ENST00000474441.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAATATCTACCACA	36	True	NA	NA	False	NA	NA	NA	88058945	88057637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88058224_88058814
transcript_98579.known	chr3	-	1063	4	FSM	ENSG00000163320.12	ENST00000462901.5	1063	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	356.382753043223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTTGATTGTGTGG	-14	False	NA	-24	True	ATTAAA	-1	NA	88149885	88055425	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88056000_88058018_88058224_88140969_88141079_88149710
transcript_98580.known	chr3	+	6460	9	FSM	ENSG00000175105.8	ENST00000636215.2	6460	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	8.90224690738243	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTTCAATTTTATGT	-11	True	NA	16	True	AATAAA	-17	NA	88059254	88144660	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133_88126270_88128808_88129012_88129686_88129827_88135060_88135203_88138704_88141049_88141644
transcript_98581.known	chr3	+	2414	3	FSM	ENSG00000179021.10	ENST00000318887.8	2414	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	21.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGTATCGTTCAGAT	-18	True	NA	17	True	AATAAA	-29	NA	88149958	88157965	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_88150186_88153229_88153472_88156020
transcript_98584.known	chr3	+	1259	3	FSM	ENSG00000179021.10	ENST00000486971.1	1259	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	71	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATATTTTCCTTTTACT	10	True	NA	38	True	AATAAA	-44	NA	88149986	88156944	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_88150186_88153229_88153472_88156126
transcript_98588.known	chr3	-	3432	16	FSM	ENSG00000184500.16	ENST00000650591.1	3432	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	46.8072169174322	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAATTTTAAAATGCAT	149	False	NA	16	True	AATAAA	-40	NA	93973933	93873123	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_93874406_93876965_93877192_93879162_93879315_93884727_93884897_93886335_93886504_93892932_93893123_93896575_93896692_93898447_93898570_93900803_93900930_93905783_93905916_93906020_93906144_93910618_93910706_93924239_93924265_93927249_93927408_93928701_93928798_93973673
transcript_98589.known	chr3	-	3372	15	FSM	ENSG00000184500.16	ENST00000394236.9	3372	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_9	16.7650328520588	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAACTCTTCATACAAC	-19	True	NA	55	True	AATAAA	-19	NA	93973896	93873050	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_93874406_93876965_93877192_93879162_93879315_93884727_93884897_93886335_93886504_93892932_93893123_93896575_93896692_93898447_93898570_93900803_93900930_93905783_93905916_93906020_93906144_93910618_93910706_93924239_93924265_93927249_93927408_93973673
transcript_98591.known	chr3	+	3906	9	FSM	ENSG00000169379.17	ENST00000535334.5	3906	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.515618744995	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAACAACACTAGAAAGAA	-24	True	NA	NA	False	TATAAA	-10	NA	93980138	94055668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_93980483_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_986.known	chr1	+	1404	7	FSM	ENSG00000157916.20	ENST00000378512.5	1404	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	414.364841923422	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGATTATTTTGAC	45	False	NA	27	True	TATAAA	-18	NA	2391889	2403751	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402096_2402343_2403034
transcript_98600.known	chr3	+	6431	6	FSM	ENSG00000178694.10	ENST00000314622.9	6431	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.5565145763173	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTACTGAATTTTTT	38	True	NA	8	True	AATAAA	-16	NA	94063060	94131832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_94063139_94064436_94064547_94084106_94084451_94094139_94094295_94095032_94095155_94126210
transcript_98615.nic	chr3	+	703	2	ISM	ENSG00000178694.10	ENST00000485793.5	816	3	-141	17316	-123	339	5prime_fragment	FALSE	canonical	3	24	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAATTTGGAATATTTG	NA	False	NA	NA	False	AAGAAA	-5	NA	94062856	94064857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_94063139_94064436
transcript_98616.known	chr3	+	751	2	FSM	ENSG00000178694.10	ENST00000477077.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTCAGCAACTTTTT	-43	True	NA	NA	False	AGTAAA	-13	NA	94062979	94064403	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_94063139_94063811
transcript_98617.known	chr3	-	3856	2	FSM	ENSG00000178700.9	ENST00000314636.3	3856	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCTGAATCTCTAATA	4	True	NA	-9	True	AATAAA	-17	NA	94062916	94057921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_94061607_94062745
transcript_98618.known	chr3	-	3733	2	FSM	ENSG00000178700.9	ENST00000394221.3	3733	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCTGAATCTCTAATA	4	True	NA	-9	True	AATAAA	-17	NA	94062916	94057921	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_94061607_94062868
transcript_98620.known	chr3	+	1399	3	FSM	ENSG00000169379.17	ENST00000492165.3	1399	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGTCATGTGGTTAG	-21	True	NA	NA	False	ATTAAA	-12	NA	93980141	94004645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_93980483_93995873_93995945_94003658
transcript_98621.known	chr3	+	2058	5	FSM	ENSG00000080224.18	ENST00000470610.6	2058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.11737237261468	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATTCATGTCTATATT	-4	True	NA	15	True	AATAAA	-24	NA	96814580	97244696	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_96815009_96866824_96866890_96987329_96987994_97226263_97226420_97243951
transcript_98626.nic	chr3	+	1711	9	NIC	ENSG00000113966.10	novel	1705	10	NA	NA	2	-13	combination_of_known_junctions	TRUE	canonical	2	6	junction_8	20.3393092311416	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAGAGAAATACTACAGT	-28	True	NA	39	True	AATAAA	-22	NA	97764522	97801216	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023_97798204_97800702
transcript_98627.known	chr3	+	1630	9	FSM	ENSG00000113966.10	ENST00000335979.6	1630	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	27.3287280165031	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	11	True	AATAAA	-20	NA	97764520	97798535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97765990_97766090_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_98628.known	chr3	+	1590	9	FSM	ENSG00000113966.10	ENST00000394206.5	1590	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	27.3287280165031	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	11	True	AATAAA	-20	NA	97764520	97798535	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97766631_97766691_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_98630.known	chr3	+	3988	8	FSM	ENSG00000113966.10	ENST00000463745.6	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	8.28817697392016	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGTGATTAAGAAATGG	-7	True	NA	52	True	AATAAA	-35	NA	97764757	97801229	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_98634.nic	chr3	+	1021	6	ISM	ENSG00000113966.10	ENST00000496713.1	851	7	-244	3168	2	176	5prime_fragment	FALSE	canonical	3	57	junction_3	7.82304288624318	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTCTGATCTCATTTT	-28	True	NA	NA	False	AATATA	-15	NA	97764522	97788179	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989
transcript_98636.nic	chr3	+	1126	5	ISM	ENSG00000113966.10	ENST00000496713.1	851	7	-244	6003	2	-2659	5prime_fragment	FALSE	canonical	3	57	junction_3	8.5841423566947	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCAGATGGAAAAA	-28	True	NA	NA	False	CATAAA	-22	NA	97764522	97785344	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954
transcript_98637.nic	chr3	+	1198	5	ISM	ENSG00000113966.10	ENST00000496713.1	851	7	-244	5931	2	-2587	5prime_fragment	FALSE	canonical	3	57	junction_3	8.5841423566947	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGCATTTCTCTATG	-28	True	NA	NA	False	AATAAA	-44	NA	97764522	97785416	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954
transcript_98640.nic	chr3	+	403	2	ISM	ENSG00000080200.10	ENST00000389622.7	10779	22	-22	101754	-22	-98031	5prime_fragment	FALSE	canonical	3	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAATGTACTTTCATCAG	-17	True	NA	NA	False	NA	NA	NA	97821988	97843230	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_97822356_97843194
transcript_98641.known	chr3	+	10779	22	FSM	ENSG00000080200.10	ENST00000389622.7	10779	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	9.51499592182205	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGTAATTTGCTGTTC	5	True	NA	28	True	AATAAA	-34	NA	97822010	97944984	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97822356_97843194_97843262_97864216_97864648_97871841_97878038_97879703_97879749_97879984_97880101_97881071_97881220_97886630_97886768_97888340_97888456_97889354_97889391_97892859_97892994_97895958_97896086_97898882_97899026_97899136_97899264_97900452_97900486_97912166_97912277_97915609_97915737_97933693_97933834_97936784_97936909_97941147_97941307_97942283_97942444_97943225
transcript_98643.known	chr3	-	4854	10	FSM	ENSG00000170854.18	ENST00000394198.7	4854	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	10.3076143496081	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	-2	True	NA	-6	True	AATAAA	-17	NA	97972431	97941817	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_98645.known	chr3	-	2232	10	FSM	ENSG00000170854.18	ENST00000360258.8	2232	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	40.6159367857945	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGTCTTCGAGTTT	342	False	NA	NA	False	TATAAA	-11	NA	97972087	97944559	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
transcript_98662.known	chr3	-	2709	7	FSM	ENSG00000080819.9	ENST00000647941.2	2709	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	7.20532210707243	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATATTTATATTTTTTGT	-1	True	NA	NA	False	AATAAA	-23	NA	98593611	98579445	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98580771_98581406_98581512_98585440_98585660_98588712_98588855_98590631_98590743_98591011_98591156_98592948
transcript_98664.known	chr3	-	1013	6	FSM	ENSG00000080822.17	ENST00000514537.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	400.609036343415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCCTTCTGCCTGGCTTG	0	True	NA	NA	False	NA	NA	NA	98522846	98516781	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521704_98522541
transcript_98665.known	chr3	-	2170	6	FSM	ENSG00000080822.17	ENST00000394181.6	2170	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	398.327202184335	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATTGTATATAGAGTGT	-1	True	NA	-12	True	AATAAA	-19	NA	98523018	98515482	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98521652_98521697_98522848
transcript_98666.known	chr3	-	865	6	FSM	ENSG00000080822.17	ENST00000502299.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	392.458201596043	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGGAAAGAGTACACCTTA	-5	True	NA	NA	False	NA	NA	NA	98522931	98516702	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98521652_98521704_98522848
transcript_98668.known	chr3	-	573	6	FSM	ENSG00000080822.17	ENST00000510541.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	383.459515464149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTTGTGTCTCTG	-11	True	NA	NA	False	NA	NA	NA	98522902	98516773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521329_98521443_98521652_98521704_98522848
transcript_98670.known	chr3	-	999	5	FSM	ENSG00000080822.17	ENST00000513287.5	999	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	365.017122886037	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCTGCTTTACAATTG	7263	False	NA	-66	True	AATGAA	-26	NA	98522754	98516652	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98522541
transcript_98671.known	chr3	-	642	4	FSM	ENSG00000080822.17	ENST00000511081.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	380.527119781086	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTATTTTATTTATAC	-14	True	NA	43	True	NA	NA	NA	98522905	98516543	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98522848
transcript_98673.known	chr3	-	214	1	FSM	ENSG00000250562.1	ENST00000502376.1	214	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCCACACTGATTTGAA	4743	False	NA	NA	False	NA	NA	NA	98525274	98525060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98525100_98525300
transcript_98674.known	chr3	-	916	5	FSM	ENSG00000080822.17	ENST00000508902.5	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	333.541976368792	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACACCAACCGGAAAGAGT	1	True	NA	NA	False	NA	NA	NA	98523041	98516710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98522848
transcript_98675.known	chr3	-	598	3	FSM	ENSG00000080822.17	ENST00000513988.1	598	3	0	0	0	0	multi-exon	FALSE	canonical	3	782	junction_2	48	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTTTAGAAGGTAGAT	16	True	NA	NA	False	AATAAA	-34	NA	98522875	98518734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98518996_98521132_98521443_98522848
transcript_98684.known	chr3	-	692	5	FSM	ENSG00000057019.16	ENST00000479144.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_3	26.8421310629391	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTACTAAGTACCTTTT	7449	False	NA	NA	False	AATAAA	-18	NA	98817828	98807906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98808175_98811193_98811320_98811467_98811555_98812331_98812483_98817768
transcript_98685.known	chr3	-	418	3	FSM	ENSG00000057019.16	ENST00000460008.1	418	3	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_2	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAGACAGTTCGTTTAA	15	True	NA	NA	False	NA	NA	NA	98819342	98812330	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98812483_98817768_98817894_98819201
transcript_98689.known	chr3	+	2837	11	FSM	ENSG00000064225.13	ENST00000469105.5	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	16.3061338152243	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTTGATTACTGACA	5	True	NA	7	True	AATAAA	-24	NA	98732265	98795254	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98771120_98771191_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_98693.nic	chr3	+	1961	11	NIC	ENSG00000064225.13	novel	2837	11	NA	NA	4	449	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	16.0996894379985	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATGGCTTTGTATTAT	94	False	NA	NA	False	AGTAAA	-29	NA	98732382	98794393	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_98732533_98756368_98756541_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_98694.known	chr3	+	1886	10	FSM	ENSG00000064225.13	ENST00000265261.11	3385	10	0	1499	0	418	multi-exon	FALSE	canonical	3	7	junction_1	15.8184140236062	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACTAAAGAAAGAATA	-6	True	NA	NA	False	CATAAA	-18	NA	98732254	98794362	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_987.known	chr1	+	3028	7	FSM	ENSG00000157916.20	ENST00000605895.6	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_1	144.138436542405	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAATTACTTCTCAAC	-4	True	NA	24	True	AATAAA	-16	NA	2391840	2405436	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_9871.known	chr1	+	559	3	FSM	ENSG00000160678.12	ENST00000292169.6	559	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGATGTCTGTCTCCTCTG	12	True	NA	11	True	ATTAAA	-21	NA	153628433	153632039	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153628497_153630508_153630663_153631697
transcript_98712.known	chr3	-	5250	5	FSM	ENSG00000239445.6	ENST00000667875.1	5250	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATGTATAGGAGATGTT	1031	False	NA	NA	False	NA	NA	NA	98732670	98709870	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98714499_98715375_98715522_98715649_98715778_98718418_98718522_98732425
transcript_98715.known	chr3	-	524	4	FSM	ENSG00000239445.6	ENST00000475816.5	524	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCTTATTTTTGTGTG	1193	False	NA	NA	False	ACTAAA	-13	NA	98732508	98714331	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98714499_98715375_98715522_98715649_98715778_98732425
transcript_98716.known	chr3	-	1475	4	FSM	ENSG00000239445.6	ENST00000667022.1	1475	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTGTCTTGCTGAGAAT	1228	False	NA	-40	True	NA	NA	NA	98732473	98713320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98714499_98715375_98715522_98718418_98718522_98732425
transcript_98718.known	chr3	-	2670	3	FSM	ENSG00000239445.6	ENST00000661245.1	2670	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTGCTGAGAATTAAAA	1166	False	NA	-35	True	NA	NA	NA	98732535	98713315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98715778_98718423_98718522_98732425
transcript_98722.known	chr3	+	3029	4	FSM	ENSG00000144810.16	ENST00000273342.8	3029	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTCCTCGTCAGAATTG	2	True	NA	NA	False	NA	NA	NA	99638595	99796733	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_99638665_99744896_99745022_99790679_99791011_99794229
transcript_98725.nnic	chr3	+	1259	11	NNC	ENSG00000184220.12	novel	4302	10	NA	NA	-11	0	at_least_one_novel_splicesite	TRUE	canonical	3	37	junction_2	214.014111684253	2215	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTGAGCGGACCGTG	-8	True	NA	30	True	AATAAA	-22	NA	99817825	100178603	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_98731.known	chr3	+	4302	10	FSM	ENSG00000184220.12	ENST00000421999.8	4302	10	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_5	32.2356293946486	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACAGAAGTGAGTATGT	0	True	NA	NA	False	ATTAAA	-23	NA	99817861	100181732	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_99818044_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_9874.known	chr1	-	547	3	FSM	ENSG00000189171.15	ENST00000392622.3	547	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	272	2760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	7384	False	NA	-25	True	AATAAA	-17	NA	153627048	153618803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153626950
transcript_98746.known	chr3	+	397	4	FSM	ENSG00000184220.12	ENST00000463526.1	397	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	266.343554246933	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAGAAAAGAGAATA	3	True	NA	24	True	NA	NA	NA	99817836	100160455	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_99818044_100051231_100051307_100146972_100147062_100160429
transcript_98747.known	chr3	+	1056	10	FSM	ENSG00000184220.12	ENST00000489081.5	1056	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	181.642777906065	2715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATCCTTGTTGAGCGGAC	-4	True	NA	26	True	AATAAA	-18	NA	100114929	100178599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100114999_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_98749.known	chr3	+	3697	19	FSM	ENSG00000036054.13	ENST00000394144.9	3697	19	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_14	45.5463744135823	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	-14	True	NA	22	True	AATAAA	-19	NA	100260991	100325238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100311832_100311878_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_9875.known	chr1	-	579	3	FSM	ENSG00000189171.15	ENST00000392623.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	255	2901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	23	True	NA	-25	True	AATAAA	-17	NA	153627268	153618803	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153627138
transcript_98750.known	chr3	+	3656	18	FSM	ENSG00000036054.13	ENST00000344949.9	3656	18	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_14	24.2170119506943	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCTCTCTTTCT	-5	True	NA	35	True	AATAAA	-32	NA	100261000	100325251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_98755.known	chr3	+	4054	18	FSM	ENSG00000036054.13	ENST00000486274.5	4054	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.7795543422999	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	58	False	NA	22	True	AATAAA	-19	NA	100261063	100325238	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100261546_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_9876.known	chr1	-	514	3	FSM	ENSG00000189171.15	ENST00000339556.8	514	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	273	3631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTACTTACACCCCA	6252	False	NA	-20	True	AATAAA	-22	NA	153628180	153618798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153628120
transcript_98764.known	chr3	+	1469	9	FSM	ENSG00000114021.12	ENST00000465368.5	1469	9	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	43.8347393627474	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	6	True	NA	10	True	ATTAAA	-15	NA	100334738	100355351	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_98765.known	chr3	-	4100	12	FSM	ENSG00000154174.8	ENST00000284320.6	4100	12	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_9	28.3196045170126	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTAGGCTGGGCATG	-1	True	NA	21	True	AATAAA	-45	NA	100401089	100363430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_100365718_100368043_100368167_100369037_100369136_100372605_100372723_100373537_100373646_100375017_100375153_100377704_100377913_100381614_100381764_100384478_100384589_100386217_100386345_100386804_100386979_100400625
transcript_98767.known	chr3	+	1813	4	FSM	ENSG00000206535.8	ENST00000489752.1	1813	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.9091394715771	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTCATTGGTATGACT	7	False	NA	1	True	CATAAA	-11	NA	100401610	100456301	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100402440_100429696_100429886_100451679_100451950_100455776
transcript_98770.known	chr3	+	1864	4	FSM	ENSG00000206535.8	ENST00000383693.8	1864	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	6.64997911442	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGAGTTTACTTTCTTA	-21	True	NA	19	True	AATAAA	-15	NA	100401538	100456319	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100402440_100429696_100429886_100451718_100451950_100455776
transcript_98782.known	chr3	+	1723	4	FSM	ENSG00000206535.8	ENST00000466996.5	1723	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	19.3620476419435	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTATTTTAATAGAATAAA	-28	True	NA	NA	False	AATAAA	-10	NA	100401531	100456188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100402440_100429696_100429886_100451735_100451950_100455776
transcript_98785.nnic	chr3	+	1779	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_1	34.296501279285	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	NA	False	NA	16	True	AATAAA	-25	NA	100492553	100577444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_98787.nic	chr3	+	1685	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	53.2585413076834	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	-36	True	NA	16	True	AATAAA	-25	NA	100492576	100577444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_100492929_100519532_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_9879.known	chr1	-	710	4	FSM	ENSG00000189171.15	ENST00000440685.7	710	4	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_3	220.467684706852	10091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCCATCCTGATTTCTT	-4	True	NA	-8	True	AATAAA	-34	NA	153628248	153618786	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153627482_153627599_153628120
transcript_98790.known	chr3	+	1567	6	FSM	ENSG00000181458.10	ENST00000323523.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	27.9614019677126	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	6	True	NA	16	True	AATAAA	-25	NA	100492618	100577444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_98791.nnic	chr3	+	1188	4	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	53.074371299987	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	NA	False	NA	16	True	AATAAA	-25	NA	100492553	100577444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_100492929_100519461_100519609_100568821_100568968_100576924
transcript_98794.nnic	chr3	+	1021	3	NIC	ENSG00000181458.10	novel	1567	6	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	68.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	-39	True	NA	16	True	AATAAA	-25	NA	100492573	100577444	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_100492929_100568821_100568968_100576924
transcript_98797.known	chr3	+	1753	8	FSM	ENSG00000114354.15	ENST00000418917.7	1753	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	368.37093106968	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	-4	True	NA	18	True	AATAAA	-15	NA	100709352	100748964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744837_100744932_100748148
transcript_98798.known	chr3	+	1783	8	FSM	ENSG00000114354.15	ENST00000476228.5	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_6	232.520264642434	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	55	True	NA	18	True	AATAAA	-15	NA	100709605	100748964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_98799.known	chr3	+	2005	8	FSM	ENSG00000114354.15	ENST00000487505.6	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	301.330315739511	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	294	False	NA	18	True	AATAAA	-15	NA	100709969	100748964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_9880.known	chr1	-	477	3	FSM	ENSG00000189171.15	ENST00000476133.6	477	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	109.5	10885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTACTTACACCCCA	0	True	NA	-20	True	AATAAA	-22	NA	153627505	153618798	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153627482
transcript_98801.known	chr3	+	1793	8	FSM	ENSG00000114354.15	ENST00000676431.1	1793	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	359.181098089097	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	29	False	NA	18	True	AATAAA	-15	NA	100709462	100748964	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_98803.known	chr3	-	4973	24	FSM	ENSG00000138468.16	ENST00000394095.7	4973	24	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	17.2742801917668	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGTGTATATCATGAAAT	-15	True	NA	NA	False	AATAAA	-18	NA	101513212	101324204	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101417592_101417791_101458954_101459053_101493872_101493969_101501069_101501120_101513090
transcript_98807.known	chr3	-	3272	23	FSM	ENSG00000138468.16	ENST00000348610.3	3272	23	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_22	20.4816487101087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCACAGAGAAGAAAATAACT	5266	False	NA	NA	False	NA	NA	NA	101513223	101325866	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101398860_101399056_101417592_101417791_101458954_101459053_101493872_101493969_101513090
transcript_9881.known	chr1	+	2165	6	FSM	ENSG00000160679.13	ENST00000368690.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_3	133.540405870283	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGGACTCTCTTTATTT	2022	False	NA	17	True	NA	NA	NA	153633981	153646305	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642242_153642430_153643226_153643365_153645063
transcript_98812.known	chr3	+	1017	2	FSM	ENSG00000174173.7	ENST00000495642.1	1017	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATAAGAGTATGCAGCC	110	False	NA	NA	False	NA	NA	NA	101562040	101565717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101562110_101564769
transcript_98813.known	chr3	+	1813	2	FSM	ENSG00000174173.7	ENST00000309922.7	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_1	0	4097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGAGCCATTCAAGCA	-4	True	NA	26	True	AGTAAA	-23	NA	101561867	101566446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101562004_101564769
transcript_9882.known	chr1	+	2079	6	FSM	ENSG00000160679.13	ENST00000368694.8	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_3	148.386791865044	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACTCTCTTTATTTG	-11	True	NA	18	True	NA	NA	NA	153634065	153646306	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153643226_153643365_153645063
transcript_98820.known	chr3	+	786	5	FSM	ENSG00000081154.12	ENST00000498274.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	1051.01546135154	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGGTGGGTGTAAAG	-3	True	NA	-57	True	ATTAAA	-18	NA	101574185	101592771	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101579588_101580005_101585436_101585512_101590214_101590271_101592626
transcript_98823.known	chr3	+	2028	4	FSM	ENSG00000081154.12	ENST00000469941.5	2028	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	1160.24432292896	1928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTTATTTTCTATT	5	True	NA	9	True	AATAAA	-15	NA	101574193	101594437	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101585436_101585512_101590214_101590271_101592626
transcript_9883.known	chr1	+	1923	5	FSM	ENSG00000160679.13	ENST00000403433.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	275.698544609869	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCAGGACTCTCTTTA	3	True	NA	14	True	NA	NA	NA	153634079	153646302	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153645063
transcript_98830.known	chr3	+	742	3	FSM	ENSG00000081154.12	ENST00000486406.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1221	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCATTTGTTTTGTTT	30	True	NA	25	True	AGTAAA	-27	NA	101574218	101593251	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101590214_101590271_101592626
transcript_98837.known	chr3	-	459	1	FSM	ENSG00000242299.1	ENST00000496294.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25560	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	40	False	NA	NA	False	AAGAAA	-4	NA	101576947	101576488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101576500_101576900
transcript_98838.known	chr3	+	2285	5	FSM	ENSG00000081154.12	ENST00000265260.8	2285	5	0	0	0	0	multi-exon	FALSE	canonical	3	1903	junction_1	270.033678455114	4065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTTACTGGTTTTTG	-9	True	NA	37	True	AATAAA	-43	NA	101574179	101594465	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101579789_101580005_101585436_101585512_101590214_101590271_101592626
transcript_98839.known	chr3	+	2165	5	FSM	ENSG00000081154.12	ENST00000460231.5	2165	5	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	804.80261555241	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTACCAATAAATTTG	1	True	NA	-21	True	NA	NA	NA	101574189	101594407	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101579841_101580005_101585436_101585512_101590214_101590271_101592626
transcript_98845.known	chr3	-	560	6	FSM	ENSG00000114391.13	ENST00000394077.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	3	4949	junction_5	1250.11893834147	108924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-6	True	NA	-12	True	AATAAA	-19	NA	101686718	101681090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_98846.known	chr3	-	668	5	FSM	ENSG00000114391.13	ENST00000464595.1	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	7222	junction_1	491.122693428027	10679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	0	True	NA	-12	True	AATAAA	-19	NA	101686712	101681090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481
transcript_98847.known	chr3	-	478	5	FSM	ENSG00000114391.13	ENST00000495401.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_1	3134.19330729615	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTTGTGCTGGATTT	7	True	NA	-17	True	AATAAA	-14	NA	101686705	101681095	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101681216_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_98848.known	chr3	+	1704	3	FSM	ENSG00000244119.2	ENST00000667844.1	1704	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	3939	False	NA	NA	False	NA	NA	NA	101686826	101700926	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101687390_101692802_101692970_101699952
transcript_98849.known	chr3	+	7672	11	FSM	ENSG00000182504.11	ENST00000341893.8	7672	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	3.79473319220206	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCATCTGTTTATTTT	-1	True	NA	17	True	AATAAA	-17	NA	101724613	101770562	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101728835_101728938_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633_101758424_101762484_101762561_101764846
transcript_98855.known	chr3	+	2888	8	FSM	ENSG00000182504.11	ENST00000489172.5	2888	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	7.83503382902976	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCCCAGGACCCAGGA	1	True	NA	NA	False	NA	NA	NA	101724592	101759512	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633
transcript_98857.known	chr3	+	8568	8	FSM	ENSG00000144815.17	ENST00000273347.10	8568	8	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_6	28.6156800173811	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTCTTTTTCT	8	True	NA	NA	False	ATTAAA	-17	NA	101779210	101828231	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_98868.nnic	chr3	+	1640	6	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	-14	4942	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	56.0049997768056	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGAGAAGTTAACATT	-15	True	NA	NA	False	AATAAA	-26	NA	101779187	101806242	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101806084
transcript_98869.nnic	chr3	+	2408	6	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	-14	5710	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	56.0049997768056	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTGAACCTGAGCTTG	-15	True	NA	4	True	AATAAA	-21	NA	101779187	101807010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101806084
transcript_98870.nic	chr3	+	1566	6	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-23	21095	-14	5836	5prime_fragment	FALSE	canonical	3	107	junction_5	24.8241817589221	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAAGCTTGATGATTTGT	-15	True	NA	NA	False	AATAAA	-13	NA	101779187	101807136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052
transcript_98876.nnic	chr3	+	332	3	NNC	ENSG00000144815.17	novel	936	6	NA	NA	-14	1297	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	65.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGGACCATGATGCCT	-15	True	NA	NA	False	NA	NA	NA	101779187	101824120	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_101779325_101782109_101782257_101824072
transcript_98879.known	chr3	+	8074	8	FSM	ENSG00000144815.17	ENST00000491511.6	8074	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	48.0883540570726	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACCATTGCTTTATTTA	-20	True	NA	8	True	AATAAA	-16	NA	101779441	101827392	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101779901_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_98880.known	chr3	+	3787	13	FSM	ENSG00000144802.11	ENST00000394054.6	3787	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.2725474213762	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGTCTTACATGCATT	-1	True	NA	19	True	AATAAA	-15	NA	101827992	101861022	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101828185_101829612_101829689_101852084_101852225_101852737_101852769_101852885_101852990_101853090_101853864_101854577_101854684_101855061_101855209_101855394_101855459_101855732_101855903_101857072_101857184_101857291_101857460_101859317
transcript_98882.known	chr3	-	1035	4	FSM	ENSG00000241754.2	ENST00000658728.1	1035	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTTTCAGGTATTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	102673976	102621060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_102621654_102663298_102663424_102667181_102667276_102673753
transcript_98883.known	chr3	-	3669	20	FSM	ENSG00000114423.23	ENST00000646825.1	3669	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.7349569716899	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTAATGCAAAAAAAAAA	2	True	NA	NA	False	NA	NA	NA	105869039	105658414	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_105659230_105670232_105670353_105671023_105671047_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
transcript_98887.known	chr3	-	6749	19	FSM	ENSG00000114423.23	ENST00000394030.8	6749	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	29.6631812351213	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGTTGGTACTTTATT	-15	True	NA	NA	False	TATAAA	-17	NA	105869012	105655460	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
transcript_98900.known	chr3	-	803	5	FSM	ENSG00000114423.23	ENST00000447441.6	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	22.1175835027247	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTAACTTGCAATGAT	-1	True	NA	NA	False	NA	NA	NA	105869042	105751526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
transcript_9891.known	chr1	+	1003	4	FSM	ENSG00000143553.11	ENST00000368685.6	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	38.4736562107401	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGGTTCCAGGAGTTT	-12	True	NA	42	True	AATAAA	-35	NA	153658702	153661852	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153658887_153659137_153659185_153659447_153659567_153661199
transcript_98914.nnic	chr3	-	486	4	NNC	ENSG00000242759.8	novel	1049	9	NA	NA	207643	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.05480466765633	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	106913665	106842906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_106843068_106843178_106843257_106913024_106913167_106913560
transcript_98918.known	chr3	-	999	3	FSM	ENSG00000242759.8	ENST00000657720.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTAGTTTTATTTATA	739	False	NA	NA	False	AATAAA	-34	NA	107240671	107111481	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_107112147_107129887_107129993_107240442
transcript_98919.nnic	chr3	-	867	3	NIC	ENSG00000242759.8	novel	998	5	NA	NA	207988	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGAAGCCAACTCAATT	NA	False	NA	NA	False	AAAACA	-26	NA	106913320	106838329	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_106838783_106839474_106839593_106913024
transcript_98921.nic	chr3	-	811	3	ISM	ENSG00000242759.8	ENST00000657806.1	1049	9	327012	0	207712	0	3prime_fragment	FALSE	canonical	1	3	junction_2	1	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	106913596	106842906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_106843068_106843178_106843257_106913024
transcript_98922.nnic	chr3	-	634	3	NNC	ENSG00000242759.8	novel	950	8	NA	NA	207695	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	NA	False	NA	NA	False	NA	NA	NA	106913613	106842906	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_106843068_106843178_106843257_106913218
transcript_98925.known	chr3	-	1708	3	FSM	ENSG00000242759.8	ENST00000660310.1	1708	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGAATGATTGAAGAACG	739	False	NA	NA	False	TATAAA	-33	NA	107240671	107108630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_107110005_107129887_107129993_107240442
transcript_98927.nnic	chr3	-	364	2	NIC	ENSG00000242759.8	novel	1051	6	NA	NA	207986	-153	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGAGAGAGAGAACAAA	NA	False	NA	43	True	AAAAAG	-29	NA	106913322	106878408	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_106878475_106913024
transcript_98928.nnic	chr3	-	440	2	NNC	ENSG00000242759.8	novel	1051	6	NA	NA	207712	-157	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATGAGAGAGAGAGAA	NA	False	NA	39	True	AAAAAG	-25	NA	106913596	106878412	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_106878475_106913218
transcript_98929.nnic	chr3	-	1568	2	NNC	ENSG00000242759.8	novel	964	7	NA	NA	207643	1161	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATAATGAGTGTTTGCCA	NA	False	NA	NA	False	AATAAA	-11	NA	106913665	106911703	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_106913167_106913560
transcript_9893.known	chr1	+	922	3	FSM	ENSG00000143553.11	ENST00000462880.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	219	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTAGTTTACTCTGGT	-1	True	NA	19	True	AATAAA	-12	NA	153658713	153661829	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153658887_153659447_153659567_153661199
transcript_98930.known	chr3	+	5519	2	FSM	ENSG00000243701.8	ENST00000660597.1	5519	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGATCCGCCCGCCTG	0	True	NA	NA	False	NA	NA	NA	107240663	107251102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107241088_107246007
transcript_98933.known	chr3	+	1741	3	FSM	ENSG00000243701.8	ENST00000658510.1	1741	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTTTATTTATTGATAAAT	-10	True	NA	NA	False	AATAAA	-4	NA	107240707	107248857	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107241088_107246007_107247089_107248577
transcript_98934.known	chr3	+	928	4	FSM	ENSG00000243701.8	ENST00000667620.1	928	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.18544972870135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTGAGTAGTTTTTAC	-3	True	NA	NA	False	NA	NA	NA	107240689	107251773	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107241088_107246007_107246053_107248577_107248832_107251542
transcript_98935.known	chr3	+	9009	18	FSM	ENSG00000114439.19	ENST00000325805.13	9009	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	9.33201506590679	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTCCCCCTAAACTG	-10	True	NA	21	True	AATAAA	-34	NA	107522961	107811339	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107789786_107789877_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_98938.known	chr3	+	8930	17	FSM	ENSG00000114439.19	ENST00000415149.6	8930	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	8.09296569559021	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAACATCGAATGATG	NA	False	NA	6	True	AATAAA	-19	NA	107522935	107811324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_98949.known	chr3	+	1586	11	FSM	ENSG00000114439.19	ENST00000402163.6	1586	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.7078715763105	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	7	True	NA	6	True	ATTAAA	-12	NA	107525401	107773066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107525488_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_9895.known	chr1	-	1008	5	FSM	ENSG00000143621.17	ENST00000480213.1	1008	5	0	0	0	0	multi-exon	FALSE	canonical	3	3818	junction_3	139.073721457362	568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTATTAAAGTACTT	6508	False	NA	-64	True	NA	NA	NA	153664474	153662064	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153662557_153662704_153662796_153663018_153663277_153664042_153664131_153664395
transcript_98953.known	chr3	+	555	7	FSM	ENSG00000114439.19	ENST00000485939.5	555	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.6808446484521	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCCGATGGTGGAAGA	19	True	NA	-22	True	AATAAA	-6	NA	107522990	107772682	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_98957.known	chr3	+	3980	17	FSM	ENSG00000114439.19	ENST00000402543.5	3980	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	15.5583578825016	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGACAAAAATAT	-11	True	NA	NA	False	NA	NA	NA	107522960	107806342	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107661827_107661945_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107798522_107798721_107801094_107801282_107805369
transcript_98958.known	chr3	+	694	2	FSM	ENSG00000240423.3	ENST00000661824.1	694	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGGATAACGTGGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	107927721	107928527	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107927761_107927872
transcript_9896.known	chr1	+	4185	22	FSM	ENSG00000169418.10	ENST00000368680.4	4185	22	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_9	7.48513265642993	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTCTTCTTGAGGGA	0	True	NA	27	True	ATTAAA	-17	NA	153678687	153693992	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153679830_153680500_153680701_153681179_153681294_153681703_153681840_153682497_153682590_153683375_153683512_153683739_153683825_153684963_153685085_153685805_153685881_153686122_153686201_153686645_153686751_153687015_153687088_153687199_153687357_153687633_153687790_153688052_153688222_153688952_153689100_153689187_153689312_153689452_153689522_153689805_153689981_153690283_153690383_153693105_153693198_153693351
transcript_98963.known	chr3	-	5292	11	FSM	ENSG00000196776.17	ENST00000361309.6	5292	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	26.6953179415417	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	6391	False	108091051	NA	False	ATTAAA	-19	NA	108091031	108043090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108047293_108049618_108049652_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_98967.known	chr3	-	5228	9	FSM	ENSG00000196776.17	ENST00000355354.13	5228	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	36.9653554020518	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-22	True	NA	NA	False	ATTAAA	-19	NA	108091025	108043090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108047293_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_9897.known	chr1	+	5252	30	FSM	ENSG00000143624.14	ENST00000318967.7	5252	30	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	62.1395001524106	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTGGCCCCAATT	-14	True	NA	11	True	ATTAAA	-17	NA	153728049	153774808	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153728785_153740650_153740735_153741284_153741369_153746956_153747071_153747278_153747364_153748688_153748756_153751094_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
transcript_98971.nnic	chr3	-	1133	8	NIC	ENSG00000196776.17	novel	5228	9	NA	NA	75	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	52.5477431115976	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTGCCCAATTGAGA	0	True	NA	-19	True	AATAAA	-15	NA	108090950	108047078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_108047293_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_98972.known	chr3	-	538	6	FSM	ENSG00000196776.17	ENST00000517766.5	538	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	60.9471902551709	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTGCCCAATTGAGA	2704	False	NA	-19	True	AATAAA	-15	NA	108059532	108047078	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108047293_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451
transcript_98974.nic	chr3	-	1454	10	NIC	ENSG00000114446.5	novel	3057	11	NA	NA	-5	-1456	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	132.812315359349	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTTTCACTAATCATTA	-18	True	NA	-1	True	AATAAA	-26	NA	108222440	108162267	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108222110
transcript_98978.known	chr3	-	931	7	FSM	ENSG00000114446.5	ENST00000478157.1	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	151.888939689498	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATTTAAGAATGATTTCC	-13	True	NA	NA	False	NA	NA	NA	108222435	108166853	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108222110
transcript_98980.known	chr3	-	3057	11	FSM	ENSG00000114446.5	ENST00000264538.4	3057	11	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_4	34.6907768722466	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTATTTTCTTCCATC	-2	True	NA	NA	False	AATAAA	-16	NA	108222424	108160811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
transcript_98981.known	chr3	-	4066	21	FSM	ENSG00000163507.15	ENST00000295746.13	4066	21	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_9	8.93014557552115	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAAAACGTTAAAGAAA	-7	True	NA	NA	False	AATAAA	-19	NA	108589438	108549863	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108551320_108552233_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_98985.nic	chr3	-	2682	20	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-192	2490	14	-1238	5prime_fragment	FALSE	canonical	3	39	junction_8	8.24789068980821	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTACAAGAAGAAAAGATTAA	9	True	NA	NA	False	AAAACA	-4	NA	108589630	108552353	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_98987.nic	chr3	-	2662	19	ISM	ENSG00000163507.15	ENST00000295746.13	4066	21	-192	3784	14	-2532	5prime_fragment	FALSE	canonical	3	39	junction_7	8.42266929332331	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGGCTTCTTATTTAA	9	True	NA	NA	False	NA	NA	NA	108589630	108553647	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_9899.known	chr1	+	2298	10	FSM	ENSG00000143554.14	ENST00000624995.4	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	21.5240319321749	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCTGTCATTATCTCTCT	10	True	NA	51	True	AATAAA	-37	NA	153775406	153780157	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153776165_153776517_153776728_153777061_153777221_153777760_153777886_153778160_153778356_153778462_153778554_153778686_153778886_153779113_153779212_153779342_153779474_153779825
transcript_98992.known	chr3	-	2014	14	FSM	ENSG00000163507.15	ENST00000487834.5	2014	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.4123549890835	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGTTTAACTCCTCAT	-5	True	NA	NA	False	NA	NA	NA	108589644	108560734	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108560842_108563121_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_98996.known	chr3	-	2764	21	FSM	ENSG00000163507.15	ENST00000481530.5	2764	21	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	14.2772546380598	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTTGATGTATTTATC	-21	True	NA	23	True	NA	NA	NA	108589452	108551115	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108551320_108552233_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582139_108582976_108583084_108585064_108585213_108589273
transcript_98997.known	chr3	+	5304	33	FSM	ENSG00000198919.13	ENST00000361582.8	5304	33	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_21	24.0473978581883	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	-3	True	NA	5	True	AATAAA	-16	NA	108589721	108694840	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
transcript_99003.nic	chr3	+	2366	16	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-214	46728	-197	0	5prime_fragment	FALSE	canonical	3	126	junction_1	15.0176192816601	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	-6	True	NA	NA	False	NA	NA	NA	108589507	108648112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_99004.known	chr3	+	2076	16	FSM	ENSG00000198919.13	ENST00000479138.5	2076	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	36.6627876736071	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	34	False	NA	NA	False	NA	NA	NA	108590054	108648112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_108590097_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_99006.nic	chr3	+	2093	15	NIC	ENSG00000198919.13	novel	5304	33	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	39.5918590889901	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	-12	True	NA	NA	False	NA	NA	NA	108589676	108648112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_108589840_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_99008.nic	chr3	+	846	6	ISM	ENSG00000198919.13	ENST00000495008.5	5164	31	-197	69522	-197	-4601	5prime_fragment	FALSE	canonical	3	126	junction_1	19.6203975494892	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAAGAAAGAGGTATGT	-6	True	NA	12	True	NA	NA	NA	108589507	108624510	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443
transcript_99011.known	chr3	+	5164	31	FSM	ENSG00000198919.13	ENST00000495008.5	5164	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	47.7877831900814	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGTGAGATAAATGTTC	16	True	NA	11	True	ATTAAA	-14	NA	108589704	108694032	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634959_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
transcript_99012.known	chr3	+	705	7	FSM	ENSG00000198919.13	ENST00000486815.5	705	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	56.0079359456219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATGACCATTGGTTT	9	True	NA	NA	False	CATAAA	-20	NA	108589733	108629111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_108589840_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061
transcript_99021.known	chr3	-	1383	9	FSM	ENSG00000163530.4	ENST00000478945.1	1383	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_8	11.3219918742243	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-8	True	NA	-7	True	AATAAA	-22	NA	109316517	109293787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316283
transcript_99022.nnic	chr3	-	1403	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	-73	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	13.2988486343743	537	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	NA	False	NA	-7	True	AATAAA	-22	NA	109316590	109293787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316336
transcript_99025.nic	chr3	-	1247	8	ISM	ENSG00000163530.4	ENST00000478945.1	1383	9	1864	0	1864	0	3prime_fragment	FALSE	canonical	3	41	junction_3	6.81834260787527	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	1856	False	NA	-7	True	AATAAA	-22	NA	109314653	109293787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509
transcript_9905.known	chr1	-	7475	11	FSM	ENSG00000143614.10	ENST00000368655.5	7475	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	9.27146158919941	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGTGGCTTGTGCTT	-27	True	NA	-4	True	AATAAA	-21	NA	153922972	153804724	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153810311_153811730_153811849_153812021_153812133_153813249_153813453_153816272_153816589_153817371_153817543_153818039_153818172_153818790_153818923_153819605_153819736_153828012_153828349_153922732
transcript_99062.known	chr3	-	1087	6	FSM	ENSG00000121570.13	ENST00000463966.5	1087	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_2	1319.702542242	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGTATTTTTAGTA	-10	True	NA	NA	False	NA	NA	NA	109337522	109327524	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109328025_109328889_109329082_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_99063.known	chr3	-	2817	7	FSM	ENSG00000121570.13	ENST00000335658.7	2788	7	-26	-3	-26	3	multi-exon	FALSE	canonical	3	2818	junction_3	421.61317183725	5297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACAGTTTATTTACTC	14	False	NA	-4	True	AATAAA	-21	NA	109337572	109326140	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_99064.known	chr3	-	805	6	FSM	ENSG00000121570.13	ENST00000495679.5	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	1170.43178357391	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTACCTGATGCTTTTC	-5	True	NA	NA	False	NA	NA	NA	109337517	109328889	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333921_109337463
transcript_99065.known	chr3	-	680	2	FSM	ENSG00000121570.13	ENST00000489281.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	2843	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTACAGGCTGGTTTT	1	True	NA	NA	False	AGTAAA	-13	NA	109337545	109333395	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109333994_109337463
transcript_99082.nnic	chr3	+	842	4	NNC	ENSG00000289358.1	novel	913	3	NA	NA	-17	-13966	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	4.10960933531265	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGACTCTTTTGTAAT	NA	False	NA	NA	False	TATAAA	-19	NA	109337722	109366008	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_109337981_109352998_109353223_109354399_109354604_109365852
transcript_99088.nnic	chr3	+	1306	3	NNC	ENSG00000289358.1	novel	1307	3	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	9	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACATTCCATCGGTTGTAT	NA	False	NA	NA	False	ATTAAA	-18	NA	109337691	109379974	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_109337981_109343506_109343651_109379101
transcript_99099.known	chr3	-	1415	4	FSM	ENSG00000242242.7	ENST00000474769.6	1415	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.7973063285955	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTGGAATTACTTC	NA	False	NA	1	True	AGTAAA	-34	NA	111071524	110892122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_110892604_110893137_110893831_111069263_111069472_111071491
transcript_99100.nnic	chr3	-	1695	3	NIC	ENSG00000242242.7	novel	1415	4	NA	NA	-76546	0	combination_of_known_splicesites	FALSE	canonical	3	112	junction_1	4	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTGGAATTACTTC	1359	False	NA	1	True	AGTAAA	-34	NA	110970022	110892122	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_110892604_110893137_110893831_110969501
transcript_99106.known	chr3	-	792	3	FSM	ENSG00000242242.7	ENST00000491709.5	792	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAGGTAGACTGTATT	NA	False	NA	NA	False	NA	NA	NA	111071553	111045387	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_111045910_111069263_111069472_111071491
transcript_99108.known	chr3	-	803	2	FSM	ENSG00000242242.7	ENST00000383686.3	803	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTGAACTTTTACTC	NA	False	NA	-16	True	AGTAAA	-17	NA	110893476	110892139	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_110892604_110893137
transcript_99109.known	chr3	+	5197	6	FSM	ENSG00000177707.11	ENST00000485303.6	5197	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	9.72419662491457	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTAATAAGTTCAT	11	True	NA	14	True	AATAAA	-25	NA	111071815	111137560	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111072178_111112029_111112372_111118655_111118953_111122120_111122239_111126183_111126336_111133634
transcript_9911.known	chr1	+	1267	3	FSM	ENSG00000284738.2	ENST00000641448.2	1325	3	53	5	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	-3	True	NA	NA	False	TATAAA	-23	NA	153923336	153935240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153923963_153928634_153928771_153934735
transcript_99116.known	chr3	+	434	2	FSM	ENSG00000240891.8	ENST00000474484.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTGTGTAGTATTTTGT	-1	True	NA	9	True	AATAAA	-19	NA	111732460	111778458	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111732704_111778267
transcript_99118.nnic	chr3	+	572	2	NNC	ENSG00000144824.21	novel	1861	2	NA	NA	-35	-15963	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCTTTGTTGGATCTT	-6	True	NA	21	True	AATAAA	-43	NA	111859714	111869832	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_111859879_111869424
transcript_9912.known	chr1	+	1254	3	FSM	ENSG00000284738.2	ENST00000641267.1	1254	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	-3	True	NA	NA	False	TATAAA	-23	NA	153923336	153935240	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153923963_153928634_153928771_153934748
transcript_99121.known	chr3	+	1339	4	FSM	ENSG00000144827.9	ENST00000491580.1	1339	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	99.2717930173969	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTAAAATTGAGCTTT	-19	True	NA	NA	False	TATAAA	-15	NA	111979009	111992271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111979204_111986263_111986376_111986913_111987052_111991376
transcript_99123.known	chr3	+	890	3	FSM	ENSG00000144827.9	ENST00000493784.1	890	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	100	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACCTTTCTTATGCTTA	23	True	NA	NA	False	ATTAAA	-28	NA	111979051	111991976	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111979204_111986913_111987052_111991376
transcript_99125.known	chr3	+	2604	5	FSM	ENSG00000144827.9	ENST00000273359.8	2604	5	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_4	13.6816482925121	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTCTTATGAGTCTT	-3	True	NA	33	True	AATAAA	-24	NA	111979025	111993368	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111991376
transcript_99126.known	chr3	+	1129	5	FSM	ENSG00000144834.14	ENST00000478951.6	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.35607132140714	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAAAGTTCATTC	-16	True	NA	6	True	AATAAA	-18	NA	111998921	112013885	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111999115_111999420_111999603_112000771_112000947_112011762_112011866_112013409
transcript_99127.known	chr3	+	1488	5	FSM	ENSG00000144834.14	ENST00000393917.6	1488	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.12414379544733	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTAAAGTTCATTCTT	0	True	NA	8	True	AATAAA	-20	NA	111998738	112013887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111999115_111999246_111999603_112000771_112000947_112011762_112011866_112013409
transcript_99128.known	chr3	+	1349	5	FSM	ENSG00000144834.14	ENST00000273368.8	1349	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.54921462739214	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTACAGTGTAAAGTTCAT	37	False	NA	4	True	AATAAA	-16	NA	111998794	112013883	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111999115_111999325_111999603_112000771_112000947_112011762_112011866_112013409
transcript_99131.known	chr3	+	1164	4	FSM	ENSG00000144834.14	ENST00000455401.6	1164	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.05480466765633	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTACAGTGTAAAGTTC	223	False	NA	2	True	AATAAA	-14	NA	111999188	112013881	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111999603_112000771_112000947_112011762_112011866_112013409
transcript_99133.known	chr3	+	2237	6	FSM	ENSG00000114529.13	ENST00000264848.10	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	12.0099958368019	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCATTCCCATTGGC	0	True	NA	20	True	AATACA	-17	NA	112086388	112118210	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112109542_112109614_112112963_112113146_112116641
transcript_99136.known	chr3	+	965	4	FSM	ENSG00000114529.13	ENST00000484828.1	965	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	36.3532055746884	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGCACTTTAGAAGA	8	True	NA	NA	False	NA	NA	NA	112086436	112117239	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112116641
transcript_99143.known	chr3	+	1524	7	FSM	ENSG00000091972.18	ENST00000473539.5	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	121.667579905248	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTACTGCTTTGCTAA	-16	True	NA	NA	False	NA	NA	NA	112333155	112362132	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112333225_112335942_112336018_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_99150.known	chr3	+	2129	6	FSM	ENSG00000091972.18	ENST00000315711.12	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	71.8871337584133	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	-16	True	NA	28	True	ATTAAA	-16	NA	112333155	112362812	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_99165.known	chr3	+	2017	5	FSM	ENSG00000091972.18	ENST00000478595.1	2017	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	94.4176228254027	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGGCTTATGATAT	6	True	NA	25	True	ATTAAA	-13	NA	112333177	112362809	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112333225_112344961_112345289_112347562_112347831_112349711_112349820_112361542
transcript_9917.known	chr1	-	2631	14	FSM	ENSG00000160741.17	ENST00000368633.2	2631	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	45.3281265138373	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	0	True	NA	-3	True	AATAAA	-15	NA	153958612	153947674	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
transcript_99170.known	chr3	+	942	5	FSM	ENSG00000091972.18	ENST00000498096.5	942	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	85.3551404427408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGTCACAGGGAGTT	495	False	NA	NA	False	NA	NA	NA	112333067	112349819	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347562_112347831_112349711
transcript_99171.nnic	chr3	+	822	2	Antisense	novelGene_ENSG00000243081.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTTGTGTTATCAAATA	NA	False	NA	NA	False	ATTAAA	-20	NA	112400095	112415909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_112400206_112415197
transcript_99173.nnic	chr3	+	544	3	Antisense	novelGene_ENSG00000186265.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	12	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTCAATCTGTGGTAG	NA	False	NA	NA	False	AATAAA	-19	NA	112420403	112518143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_112420693_112420790_112420910_112518007
transcript_99176.nnic	chr3	+	613	2	Antisense	novelGene_ENSG00000186265.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	24	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTCAATCTGTGGTAG	15	False	NA	NA	False	AATAAA	-19	NA	112420432	112518143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_112420910_112518007
transcript_99181.nic	chr3	-	1202	12	NIC	ENSG00000144848.11	novel	1568	12	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_11	195.078666056576	752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	1192	False	NA	-3	True	AATAAA	-17	NA	112561985	112532509	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561845
transcript_99192.known	chr3	+	2444	8	FSM	ENSG00000138459.9	ENST00000261034.6	2444	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	67.671475315886	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTTGCCACTCTG	-18	True	NA	3	True	ATTAAA	-17	NA	112562071	112584156	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112580707_112581178_112581327_112582670
transcript_99193.known	chr3	-	12301	8	FSM	ENSG00000091986.16	ENST00000206423.8	12301	8	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_7	5.32993088747932	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTGTGTGGAGTCTGG	-4	True	NA	-2	True	AATAAA	-13	NA	112641143	112596796	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027_112639917_112640326
transcript_99197.known	chr3	-	3557	8	FSM	ENSG00000091986.16	ENST00000439685.6	3557	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	17.1357127969987	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCTTTTTCTTATTT	-1	True	NA	NA	False	TATAAA	-18	NA	112641300	112605100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_112605764_112607175_112607257_112609977_112610082_112616709_112616859_112618967_112619105_112630112_112630270_112638027_112639917_112640923
transcript_99200.nnic	chr3	+	795	3	NNC	ENSG00000240057.7	novel	2713	3	NA	NA	-34	-17869	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGAGAGTCTGACTGGA	NA	False	NA	NA	False	AATAAA	-20	NA	113019433	113144151	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_113019707_113061786_113062011_113143853
transcript_99210.known	chr3	-	4820	9	FSM	ENSG00000163608.15	ENST00000314400.10	4820	9	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_7	21.759696114606	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	-7	True	NA	-5	True	ATTAAA	-18	NA	113019671	113002443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113017447_113017603_113019541
transcript_99213.known	chr3	-	2842	8	FSM	ENSG00000163608.15	ENST00000486271.5	2842	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_6	22.3889550029127	2385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTAATTTTATTTATTT	0	True	NA	-13	True	ATTAAA	-23	NA	113019706	113004916	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113013404_113013952_113014033_113017447_113017603_113019541
transcript_99217.known	chr3	-	4672	7	FSM	ENSG00000163608.15	ENST00000383675.6	4672	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	49.1169239898247	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTGTTGGCCTCTTT	NA	False	NA	-5	True	ATTAAA	-18	NA	113019733	113002443	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113017447_113017603_113019541
transcript_99220.known	chr3	+	1921	6	FSM	ENSG00000163607.18	ENST00000383678.8	1921	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	23.8713217061812	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTTTTCTTTAGA	3	True	NA	3	True	ATTAAA	-13	NA	112990983	113001969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112991336_112993025_112993125_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_99226.known	chr3	-	1048	6	FSM	ENSG00000163608.15	ENST00000461381.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	56.5352987079754	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTATCAAAACTTCAAAGCA	-7	True	NA	-64	True	CATAAA	-35	NA	113019671	113005943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113011044_113011407_113013952_113014033_113017447_113017603_113019541
transcript_99227.known	chr3	+	715	5	FSM	ENSG00000163607.18	ENST00000488781.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	97.9830980322627	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCCGGTTTAGCTGAA	28	False	NA	NA	False	NA	NA	NA	112991008	113000919	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112991336_112993025_112993125_112996891_112996992_112999445_112999565_113000849
transcript_99231.known	chr3	+	1787	5	FSM	ENSG00000163607.18	ENST00000383677.7	1787	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	89.786900492221	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCTGGATAACAAATTA	4	True	NA	-31	True	ATTAAA	-13	NA	112990984	113001935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112991336_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_99235.known	chr3	-	520	5	FSM	ENSG00000163608.15	ENST00000496340.1	520	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_2	38.1927676399603	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGCAAGAGTTCATTAT	-7	True	NA	NA	False	NA	NA	NA	113019671	113012792	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113012812_113013271_113013404_113013948_113014033_113017447_113017603_113019541
transcript_99236.known	chr3	+	679	4	FSM	ENSG00000163607.18	ENST00000295864.9	679	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	111.483930082621	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATGCTAACTGGAGTT	6	True	NA	NA	False	NA	NA	NA	112990986	113000960	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112991336_112996891_112996992_112999445_112999565_113000849
transcript_99240.known	chr3	-	1212	3	FSM	ENSG00000163608.15	ENST00000472705.5	1212	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	73.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAATGAGGAGCGGGGG	0	True	NA	NA	False	NA	NA	NA	113019664	113005175	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113019541
transcript_99242.known	chr3	-	707	1	FSM	ENSG00000272844.1	ENST00000609673.1	707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTGCACAGATGTTAC	NA	False	NA	NA	False	ATTAAA	-23	NA	112991153	112990446	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_112990400_112991200
transcript_99243.known	chr3	-	1512	4	FSM	ENSG00000163608.15	ENST00000469809.5	1512	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.0053761110008	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCATATTAAAGTGAG	6	True	NA	-50	True	NA	NA	NA	113019658	113004953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113013948_113014033_113019541
transcript_99245.known	chr3	+	582	4	FSM	ENSG00000144857.15	ENST00000464546.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.83176086632785	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACCCACGGGACCCTCG	64	False	NA	NA	False	NA	NA	NA	113211002	113250711	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_113211158_113216186_113216279_113249721_113249900_113250554
transcript_99246.known	chr3	+	2173	4	FSM	ENSG00000144857.15	ENST00000485230.5	2173	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACTGCCACTTGGTG	2	True	NA	NA	False	AGTAAA	-18	NA	113211564	113252005	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_113212017_113216186_113216279_113249721_113249900_113250554
transcript_99252.known	chr3	-	6837	39	FSM	ENSG00000285943.1	ENST00000649772.1	6837	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	48.4429298404168	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTATATTAATAAAATTGG	20	True	NA	NA	False	NA	NA	NA	113515151	113361900	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113363308_113363476_113363533_113366038_113366310_113379305_113379552_113380898_113381061_113381850_113381915_113395749_113395861_113396517_113396728_113399905_113400001_113400544_113400645_113401239_113401288_113401583_113401740_113403851_113404017_113406926_113407042_113416524_113416628_113420016_113420180_113426123_113426278_113427186_113427340_113433564_113433670_113441452_113441655_113444740_113444832_113445286_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
transcript_99255.known	chr3	-	5417	18	FSM	ENSG00000163611.11	ENST00000295872.8	5417	18	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_17	19.1034336303867	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGCCAATTTTAT	15	True	NA	NA	False	AATAAA	-21	NA	113515156	113442717	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113514896
transcript_99256.nic	chr3	-	3348	18	NIC	ENSG00000163611.11	novel	5417	18	NA	NA	-1	618	intron_retention	FALSE	canonical	0	0	junction_17	26.6015063184081	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTAAATGTGGTAACATT	-17	True	NA	-5	True	AATAAA	-20	NA	113515188	113444635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113515079
transcript_99260.nic	chr3	-	2135	4	ISM	ENSG00000163611.11	ENST00000295872.8	5417	18	-25	55162	6	1056	5prime_fragment	FALSE	canonical	3	40	junction_3	27.3901847788988	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTAAAGATTAGCTGGGT	-10	True	NA	NA	False	AAAACA	-29	NA	113515181	113497879	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_113499583_113503179_113503228_113506506_113506606_113514896
transcript_99263.known	chr3	-	962	5	FSM	ENSG00000121579.14	ENST00000493900.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_4	496.058464296296	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTCTTGTTTTTCTT	8347	False	NA	14	True	TTTAAA	-12	NA	113746300	113721655	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
transcript_99270.known	chr3	-	958	5	FSM	ENSG00000121579.14	ENST00000481432.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	588.956439390894	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATCATGTTTGA	-13	True	NA	-33	True	NA	NA	NA	113746249	113721589	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723980_113724096_113745941
transcript_99271.known	chr3	+	4575	15	FSM	ENSG00000114573.10	ENST00000273398.8	4575	15	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_12	20.581470763177	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTTTCTTTTTCTCTT	-16	True	NA	17	True	AATAAA	-18	NA	113747034	113812056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_113747114_113778740_113778836_113781049_113781179_113784223_113784439_113784695_113784834_113786231_113786384_113788712_113788876_113789731_113789841_113794871_113794995_113795089_113795205_113795875_113795940_113798242_113798447_113803582_113803678_113805353_113805526_113809334
transcript_99272.known	chr3	+	3807	18	FSM	ENSG00000178075.20	ENST00000358160.9	3807	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	3.0189711577309	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTAGTTTTTCTTCTTTT	3	True	NA	12	True	AATAAA	-16	NA	113838787	113947174	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_113838937_113844502_113844650_113869506_113869592_113875483_113875588_113876164_113876261_113882751_113882833_113901030_113901147_113904139_113904273_113908957_113909121_113915700_113915839_113930713_113930833_113933510_113933654_113934431_113934536_113936265_113936443_113938085_113938144_113939885_113939997_113940239_113940346_113945397
transcript_99276.nic	chr3	+	1303	6	ISM	ENSG00000178075.20	ENST00000358160.9	3807	18	66	63635	-20	7672	5prime_fragment	FALSE	canonical	3	14	junction_5	1.4142135623731	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCATGATCCATCTATC	32	False	NA	NA	False	NA	NA	NA	113838853	113883539	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_113838937_113844502_113844650_113869506_113869592_113875483_113875588_113876164_113876261_113882751
transcript_99278.nic	chr3	+	698	3	NIC	ENSG00000178075.20	novel	290	2	NA	NA	-20	325	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGAGAGTTATGAAC	32	False	NA	NA	False	ATTAAA	-23	NA	113838853	113845290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_113838937_113844502_113844650_113844822
transcript_99279.known	chr3	-	495	1	FSM	ENSG00000240776.1	ENST00000485426.1	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGAGAGTATTATTATT	37	False	NA	NA	False	TTTAAA	-40	NA	113850731	113850236	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113850200_113850700
transcript_99284.known	chr3	+	4023	10	FSM	ENSG00000151576.10	ENST00000281273.8	4023	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.8953443011947	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGAGATTTCTCATT	-1	True	NA	91	True	ATTAAA	-19	NA	114056736	114088422	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_114056865_114056998_114057107_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_99288.known	chr3	+	3844	9	FSM	ENSG00000151576.10	ENST00000485050.5	3844	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	70.1921469966548	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTTTGGCTTTCT	-3	True	NA	18	True	AATAAA	-20	NA	114056734	114088349	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_114056865_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_99302.known	chr3	-	2433	9	FSM	ENSG00000163617.11	ENST00000481358.5	2433	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	5.54385921538417	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCAAACTCCTGGCCT	-25	True	NA	NA	False	NA	NA	NA	114056539	114004073	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_114004747_114005507_114005963_114010771_114011022_114018677_114018869_114031625_114031780_114034924_114035149_114036607_114036787_114042702_114042847_114056376
transcript_99303.known	chr3	-	1957	9	FSM	ENSG00000163617.11	ENST00000491000.5	1957	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	3.903123748999	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTGTTCTATCAGAA	NA	False	NA	NA	False	NA	NA	NA	114056594	114005507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_114005963_114010771_114011022_114018677_114018869_114031625_114031780_114034924_114035149_114036607_114036787_114042702_114042847_114046590_114046733_114056376
transcript_99304.known	chr3	-	591	4	FSM	ENSG00000163617.11	ENST00000483766.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.1336448530109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAAAGGAAGGCTCT	-25	True	NA	NA	False	NA	NA	NA	114056539	114035043	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_114035149_114036607_114036787_114042702_114042847_114056376
transcript_99305.known	chr3	-	3889	17	FSM	ENSG00000163617.11	ENST00000295878.8	3889	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	4.17161164899131	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGTTACTGTCTCAT	-12	True	NA	1	True	AATAAA	-23	NA	114056526	113964136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113965360_113978185_113978332_113978857_113979011_113980649_113980794_114001594_114001697_114002455_114002539_114004636_114004747_114005507_114005963_114010771_114011022_114018677_114018869_114031625_114031780_114034924_114035149_114036607_114036787_114042702_114042847_114046590_114046733_114053596_114053636_114056376
transcript_99306.known	chr3	-	2770	7	FSM	ENSG00000151577.13	ENST00000383673.5	2770	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.74535599249993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTATACTAAACTTTTC	NA	False	NA	NA	False	AATAAA	-24	NA	114179052	114127579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_114128913_114131117_114131401_114139499_114139697_114147414_114147558_114159754_114159868_114171722_114172028_114178656
transcript_99307.nic	chr3	-	1013	4	ISM	ENSG00000151577.13	ENST00000295881.9	1541	8	80	18569	80	-18569	5prime_fragment	FALSE	canonical	0	0	junction_2	0.816496580927726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAAGCTTTGGCCTTTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	114178972	114147278	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_114147558_114159754_114159868_114171722_114172028_114178656
transcript_99312.nnic	chr3	-	472	2	NNC	ENSG00000181722.17	novel	27503	12	NA	NA	-9	-172085	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGGAAGGTTCTTGAAA	-8	True	NA	-13	True	ATTAAA	-35	NA	115147297	115146476	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_115146870_115147218
transcript_99325.known	chr3	+	1498	3	FSM	ENSG00000172020.13	ENST00000305124.11	1498	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_2	24.5	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAATGGCTCTGTGTTT	-5	True	NA	17	True	AATAAA	-17	NA	115623509	115721483	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_115623720_115676012_115676611_115720793
transcript_99328.known	chr3	+	553	4	FSM	ENSG00000240922.1	ENST00000490351.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTATTTTTAGTAT	NA	False	NA	NA	False	ATTAAA	-23	NA	116360023	116370090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_116360094_116367941_116368036_116368142_116368272_116369830
transcript_9934.known	chr1	+	1750	10	FSM	ENSG00000143578.16	ENST00000271889.8	1750	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	43.7975138817516	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	22	False	NA	20	True	AATAAA	-15	NA	153967920	153974359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968185_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_99341.known	chr3	-	1131	4	FSM	ENSG00000243276.6	ENST00000657445.1	1131	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.77123616632825	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACTATATTTATTTCCC	40	False	NA	NA	False	AATAAA	-15	NA	118810757	118507779	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_118508693_118662409_118662491_118683686_118683773_118810706
transcript_99359.known	chr3	-	684	3	FSM	ENSG00000144847.13	ENST00000459718.1	684	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCCTTTATGAAATGTA	NA	False	NA	NA	False	AATAAA	-22	NA	118930253	118925922	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_118926257_118928508_118928717_118930111
transcript_99362.known	chr3	+	2028	8	FSM	ENSG00000114638.8	ENST00000264234.8	2028	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2.35606035749581	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTCATTTTTACCAA	12	True	NA	9	True	AGTAAA	-18	NA	119173597	119205143	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119173639_119186713_119186811_119187774_119187976_119190244_119190320_119190981_119191105_119194218_119194399_119199056_119199141_119203916
transcript_99366.known	chr3	+	981	7	FSM	ENSG00000114638.8	ENST00000497685.5	981	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.6249406456535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCTCAGGCTTCTGCAGT	-4	True	NA	NA	False	NA	NA	NA	119173516	119204112	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119173639_119187774_119187976_119190244_119190320_119190981_119191105_119194218_119194399_119199056_119199141_119203916
transcript_99376.known	chr3	-	2385	9	FSM	ENSG00000121578.13	ENST00000359213.7	2385	9	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_6	101.969358142532	3692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	NA	False	NA	-18	True	AATAAA	-41	NA	119240946	119211741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
transcript_9938.known	chr1	+	1749	10	FSM	ENSG00000143578.16	ENST00000368607.8	1749	10	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_1	40.879225911349	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	3	True	NA	20	True	AATAAA	-15	NA	153967901	153974359	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968165_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_99386.known	chr3	-	2494	8	FSM	ENSG00000121578.13	ENST00000483209.5	2494	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	108.950653499459	3559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGTGTTTTTTATTGTT	263	False	NA	-8	True	AGTAAA	-23	NA	119240639	119211731	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240360
transcript_99388.known	chr3	-	2234	8	FSM	ENSG00000121578.13	ENST00000393765.7	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_6	56.6352453901999	4543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-1	True	NA	-18	True	AATAAA	-41	NA	119240878	119211741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_99390.nic	chr3	-	2259	8	NIC	ENSG00000121578.13	novel	2385	9	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	46	junction_2	96.2329232134413	3176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	NA	False	NA	-18	True	AATAAA	-41	NA	119240965	119211741	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_99409.known	chr3	-	2107	7	FSM	ENSG00000121578.13	ENST00000480814.5	2107	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	102.604418358405	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATCAAATACCTCTGTA	3831	False	NA	-55	True	AATAAA	-4	NA	119237071	119211778	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852
transcript_99410.known	chr3	-	582	5	FSM	ENSG00000121578.13	ENST00000459820.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.0570786544889	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTGACTTTCCACCTTT	-1	True	NA	NA	False	AATAAA	-13	NA	119240878	119230091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119230245_119235144_119235228_119236152_119236252_119236852_119237071_119240849
transcript_99427.known	chr3	-	4853	9	FSM	ENSG00000176142.13	ENST00000319172.10	4853	9	0	0	0	0	multi-exon	FALSE	canonical	2	100	junction_1	29.5209141965489	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGATGTCTTGGAAC	13	True	NA	NA	False	AATAAA	-29	NA	119463615	119428948	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462149_119463335
transcript_99428.known	chr3	-	588	4	FSM	ENSG00000176142.13	ENST00000461654.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	68.8444300982698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCTTACTCAGACTTT	-18	True	NA	NA	False	NA	NA	NA	119463646	119458017	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119458241_119461961_119462149_119463335_119463473_119463605
transcript_99429.known	chr3	+	2888	12	FSM	ENSG00000163389.12	ENST00000647766.1	2888	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	54.1560341333988	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACTAGCAATGCACAGGG	-1	True	NA	NA	False	TTTAAA	-29	NA	119468983	119493825	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119478333_119478475_119479907_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_99435.known	chr3	+	1420	11	FSM	ENSG00000163389.12	ENST00000486607.5	1420	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	43.5724683716679	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGATATCCTACGGTGA	-22	True	NA	NA	False	NA	NA	NA	119468962	119492477	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119479907_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_99438.nnic	chr3	+	1435	11	NNC	ENSG00000163389.12	novel	3508	11	NA	NA	-25	-386	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_10	37.2055103445713	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTAAGTTGTATTGCT	NA	False	NA	NA	False	AATAAA	-28	NA	119468937	119492091	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119491762
transcript_99439.known	chr3	+	3508	11	FSM	ENSG00000163389.12	ENST00000295588.9	3508	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	14.7787008901324	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTGTCTTTATTTA	-22	True	NA	NA	False	AATGAA	-24	NA	119468962	119494708	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_99459.nnic	chr3	+	1048	7	NNC	ENSG00000113845.10	novel	2379	7	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	201.301114971798	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	4689	False	NA	14	True	AATAAA	-21	NA	119498514	119524066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_119498589_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_99460.known	chr3	+	2379	7	FSM	ENSG00000113845.10	ENST00000494664.6	2379	7	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_1	34.322004603461	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATGTCAGAGGAAATTAG	-5	True	NA	NA	False	NA	NA	NA	119498546	119525090	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_99465.known	chr3	+	1271	6	FSM	ENSG00000113845.10	ENST00000264244.7	1271	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	206.486222300666	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	0	True	NA	14	True	AATAAA	-21	NA	119498551	119524066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119517204_119517316_119523605
transcript_99468.known	chr3	+	725	6	FSM	ENSG00000113845.10	ENST00000492164.5	725	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	222.295838917421	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTCCCTGAGAAAATTGA	23	False	NA	NA	False	NA	NA	NA	119498574	119523630	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498928_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_99478.nic	chr3	+	1076	4	NIC	ENSG00000113845.10	novel	725	6	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	263.789478351372	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	4677	False	NA	14	True	AATAAA	-21	NA	119498502	119524066	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_119498928_119513640_119513720_119517204_119517316_119523605
transcript_99479.known	chr3	+	670	4	FSM	ENSG00000113845.10	ENST00000463927.6	670	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	249.952439920522	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAATTGAAAGTAGTT	-5	True	NA	NA	False	NA	NA	NA	119498582	119523638	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498943_119500694_119500861_119517204_119517316_119523605
transcript_99483.known	chr3	+	710	3	FSM	ENSG00000113845.10	ENST00000493694.1	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	260	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCACTCTTTGGTCAG	-5	True	NA	-52	True	NA	NA	NA	119498546	119523823	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498928_119517204_119517316_119523605
transcript_99484.known	chr3	+	551	3	FSM	ENSG00000113845.10	ENST00000486418.5	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	294	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGAACATGTTGAGCCC	15	True	NA	65	True	AAAACA	-43	NA	119498566	119517315	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498928_119513640_119513720_119517204
transcript_99485.known	chr3	+	684	3	FSM	ENSG00000113845.10	ENST00000498399.1	684	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	272	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	166	False	NA	9	True	AATAAA	-16	NA	119498816	119524061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498934_119517204_119517316_119523605
transcript_99486.known	chr3	+	1501	4	FSM	ENSG00000144843.12	ENST00000478927.5	1501	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.49443825784929	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCACCTTAAGCTCAGTTT	-5	True	NA	NA	False	NA	NA	NA	119579589	119588007	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119579852_119582133_119582468_119586284_119586646_119587463
transcript_99488.known	chr3	+	1743	11	FSM	ENSG00000144837.9	ENST00000273371.9	1743	11	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_1	3.55668384875575	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTAATTGTTTTACTTG	1	True	NA	9	True	AATAAA	-20	NA	119597884	119629811	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119597987_119606773_119606976_119608769_119608948_119609467_119609577_119613016_119613119_119616011_119616102_119618018_119618187_119619562_119619653_119625123_119625233_119628700_119628866_119629383
transcript_99492.known	chr3	-	471	4	FSM	ENSG00000138495.7	ENST00000484810.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	1109.2148374213	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	54	False	NA	-10	True	AGTAAA	-16	NA	119677346	119669531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119669666_119675144_119675234_119676861_119676967_119677203
transcript_99497.known	chr3	-	426	3	FSM	ENSG00000138495.7	ENST00000261070.7	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2419	junction_1	339	12914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-6	True	NA	-10	True	AGTAAA	-16	NA	119677406	119669531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119669666_119675144_119675234_119677203
transcript_99498.known	chr3	-	430	4	FSM	ENSG00000138495.7	ENST00000486606.5	430	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1447.6092935135	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	106	False	NA	-10	True	AGTAAA	-16	NA	119677294	119669531	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119669666_119674672_119674789_119675144_119675234_119677203
transcript_99499.known	chr3	-	660	3	FSM	ENSG00000138495.7	ENST00000497116.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1522	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAATGTCAAAAATGCAA	36	False	NA	NA	False	AATAAA	-42	NA	119677364	119674378	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119674789_119675144_119675234_119677203
transcript_995.known	chr1	+	3000	6	FSM	ENSG00000157916.20	ENST00000378513.7	3000	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	419.180343050578	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTTCTCAACTGTATG	6371	False	NA	30	True	AATAAA	-22	NA	2391774	2405442	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2400856_2400936_2402206_2402343_2403034
transcript_99501.known	chr3	+	4433	18	FSM	ENSG00000183833.16	ENST00000273390.9	4433	18	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	10.092307530009	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCATAGTGACTGGAGC	-37	True	NA	NA	False	AATAAA	-40	NA	119703021	119767102	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561_119715744_119726170_119726349_119730219_119730378_119732293_119732477_119733363_119733507_119737365_119737483_119739254_119739327_119740548_119740696_119743974_119744197_119747114_119747264_119747810_119747903_119750936_119751099_119765051
transcript_99506.known	chr3	+	939	6	FSM	ENSG00000183833.16	ENST00000463700.1	939	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.07245829914744	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	-26	True	NA	13	True	AATAAA	-22	NA	119703032	119715934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561
transcript_99511.nic	chr3	+	856	5	ISM	ENSG00000183833.16	ENST00000482573.5	4356	17	17	51168	3	0	5prime_fragment	FALSE	canonical	3	8	junction_1	10.7558123821495	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	-20	True	NA	13	True	AATAAA	-22	NA	119703038	119715934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_119703223_119707403_119707562_119708590_119708675_119709838_119709896_119715561
transcript_99513.nic	chr3	+	715	4	ISM	ENSG00000183833.16	ENST00000475093.5	2353	16	-29	49352	0	0	5prime_fragment	FALSE	canonical	1	1	junction_1	15.4344492037203	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	-37	True	NA	13	True	AATAAA	-22	NA	119703021	119715934	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_119703223_119708590_119708675_119709838_119709896_119715561
transcript_99514.known	chr3	-	7000	12	FSM	ENSG00000082701.17	ENST00000316626.6	7000	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	44.7424216769797	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTGTGGTCCTCTTAT	2041	False	NA	NA	False	AATAAA	-17	NA	120093666	119821321	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119866589_119866629_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_99515.known	chr3	-	7743	11	FSM	ENSG00000082701.17	ENST00000264235.13	7743	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	11.0765518100174	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTGGTCCTCTTATT	-2	True	NA	NA	False	AATAAA	-18	NA	120094447	119821320	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_99517.known	chr3	+	982	2	FSM	ENSG00000242622.3	ENST00000469070.1	982	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGTGCCCAAATGGG	14	True	NA	NA	False	NA	NA	NA	120095269	120099186	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120095779_120098713
transcript_99518.nic	chr3	+	2032	2	NIC	ENSG00000242622.3	novel	969	6	NA	NA	-90	180	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACACTTGAATCTGTT	736	False	NA	NA	False	AATAAA	-2	NA	120094804	120099366	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_120096184_120098713
transcript_99523.nnic	chr3	+	710	4	Fusion	ENSG00000065518.8_ENSG00000286735.1	novel	425	2	NA	NA	40709	0	multi-exon	FALSE	canonical	3	15	junction_2	1712.95579498	68	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	NA	False	NA	27	True	AATAAA	-19	NA	120489682	120602328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_120490051_120499505_120499580_120601110_120601258_120602207
transcript_99528.nnic	chr3	+	1054	2	NNC	ENSG00000286735.1	novel	1466	3	NA	NA	40709	-9484	at_least_one_novel_splicesite	FALSE	canonical	3	62	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAAAC	NA	False	NA	NA	False	NA	NA	NA	120489682	120500191	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_120490051_120499505
transcript_99529.known	chr3	-	5682	11	FSM	ENSG00000163430.12	ENST00000295633.8	5682	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_5	153.621482872676	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTCTTGTCATTTTCTT	0	True	NA	NA	False	ATTAAA	-18	NA	120450992	120392292	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120396997_120399882_120399960_120402807_120402919_120403241_120403355_120404852_120404972_120409531_120409663_120410951_120410985_120411853_120411984_120415922_120416028_120450683_120450747_120450896
transcript_99530.known	chr3	-	540	3	FSM	ENSG00000163430.12	ENST00000472536.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1009	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTTATAAGCTTCCT	0	True	NA	-7	True	ATTAAA	-15	NA	120450992	120421171	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120421553_120450683_120450747_120450896
transcript_99534.known	chr3	+	558	3	FSM	ENSG00000065518.8	ENST00000491335.1	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1824.5	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	22	False	NA	27	True	AATAAA	-19	NA	120596356	120602328	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120596647_120601110_120601258_120602207
transcript_99542.known	chr3	+	309	2	FSM	ENSG00000065518.8	ENST00000492739.1	309	2	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	0	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTAGTAGTTTCTCTT	12	True	NA	22	True	AATAAA	-14	NA	120596346	120602323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120596540_120602207
transcript_99543.known	chr3	+	651	3	FSM	ENSG00000065518.8	ENST00000184266.3	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	3456	junction_1	108	14178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCTACAATCAGTTGT	1	True	NA	NA	False	ATTAAA	-21	NA	120596335	120602507	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120596540_120601110_120601258_120602207
transcript_99544.known	chr3	+	1426	2	FSM	ENSG00000065518.8	ENST00000485064.1	1426	2	0	0	0	0	multi-exon	FALSE	canonical	3	3456	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTAGTAGTTTCTCTTT	-7	True	NA	23	True	AATAAA	-15	NA	120596327	120602324	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120596540_120601110
transcript_99548.known	chr3	-	1007	9	FSM	ENSG00000144840.10	ENST00000491398.5	1007	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	78.4624711247358	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGGAAAAATGAAAGG	3	True	NA	NA	False	NA	NA	NA	120742533	120689693	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738526_120738668_120742461
transcript_9955.known	chr1	-	1353	8	FSM	ENSG00000143545.10	ENST00000614713.4	1353	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	287.996456894305	6566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTCTCCACTCAAATC	6727	False	NA	0	True	NA	NA	NA	153985366	153981616	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153984983
transcript_99550.known	chr3	-	5605	8	FSM	ENSG00000144840.10	ENST00000273375.8	5605	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_6	10.4744587313276	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGTAGCTGTGTAAG	0	True	NA	NA	False	ATTAAA	-30	NA	120742516	120684937	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_99556.known	chr3	-	760	7	FSM	ENSG00000144840.10	ENST00000483733.1	760	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	61.9076372958584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACCCTTCAGCCTTACC	-4	True	NA	NA	False	NA	NA	NA	120742520	120689714	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_99564.known	chr3	+	3000	5	FSM	ENSG00000153767.10	ENST00000283875.6	3000	5	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	9.5524865872714	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTTGTTCATTTTAA	4	True	NA	22	True	AATAAA	-16	NA	120742743	120783069	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120742795_120750522_120751001_120770727_120770930_120776422_120776665_120781042
transcript_99568.known	chr3	+	567	2	FSM	ENSG00000153767.10	ENST00000497393.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGATTCATCTAATTT	1	True	NA	NA	False	AATAAA	-21	NA	120742761	120751056	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120742795_120750522
transcript_9957.known	chr1	-	868	8	FSM	ENSG00000143545.10	ENST00000495720.5	868	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	287.299459783406	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGACAACGGCAGAGG	5735	False	NA	-111	True	NA	NA	NA	153986358	153982060	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986016
transcript_99570.known	chr3	-	3960	9	FSM	ENSG00000144840.10	ENST00000648525.1	3960	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	78.0311436222743	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGCTTTTCTCAATAA	0	True	NA	NA	False	AATAAA	-2	NA	120742516	120686700	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738549_120738668_120742461
transcript_99571.known	chr3	+	9291	27	FSM	ENSG00000145087.13	ENST00000471454.6	9291	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_25	5.88549515796571	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTCTCTTATGTCATGA	-17	True	NA	NA	False	AATAAA	-21	NA	120908204	121424761	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120908335_120909570_120909768_120954939_120955038_121041699_121041782_121045434_121045536_121114924_121115060_121121640_121121705_121152476_121152561_121157503_121157628_121205922_121206002_121223002_121223158_121233615_121233689_121238970_121239119_121240439_121240508_121250722_121250764_121254894_121255113_121257160_121257334_121259042_121259169_121279804_121279957_121318474_121318541_121378715_121378887_121381292_121381533_121407242_121407604_121413157_121413324_121415856_121415969_121418336_121418558_121419055
transcript_99573.nic	chr3	+	3371	19	ISM	ENSG00000145087.13	ENST00000472879.5	3067	23	-116	126621	-32	122079	5prime_fragment	FALSE	canonical	2	10	junction_8	4.30761599444003	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAGGTACATGATGGT	NA	False	NA	NA	False	AATAAA	-4	NA	120908172	121281047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_120908335_120909570_120909768_120954939_120955038_121041699_121041782_121045434_121045536_121114924_121115060_121121640_121121705_121152476_121152561_121157503_121157628_121205922_121206002_121223002_121223158_121233615_121233689_121238970_121239119_121240439_121240508_121250722_121250764_121254894_121255113_121257160_121257334_121259042_121259169_121279804
transcript_99574.nnic	chr3	+	676	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-32	-128809	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	8.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAGCATAAAATCGACAT	NA	False	NA	NA	False	AATAAA	-17	NA	120908172	120916637	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_99576.nnic	chr3	+	885	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-32	-128600	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	8.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGATTGGTTAATGT	NA	False	NA	NA	False	AATAAA	-23	NA	120908172	120916846	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_99586.nnic	chr3	-	499	4	NIC	ENSG00000286827.1	novel	2814	5	NA	NA	-32	-2596	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTGGTCATCCCAGTA	NA	False	NA	NA	False	AATAAA	-28	NA	120907937	120864457	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_120864594_120868268_120868384_120872176_120872254_120907766
transcript_99596.nic	chr3	-	1892	3	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	-20	108631	-20	-2962	5prime_fragment	FALSE	canonical	3	41	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATTATTAAAGTCCCA	-2	True	NA	NA	False	ACTAAA	-8	NA	121546008	121540061	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_121541480_121544726_121544907_121545714
transcript_99597.nic	chr3	-	1075	3	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	-20	109448	-20	-3779	5prime_fragment	FALSE	canonical	3	41	junction_1	8.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATTAAAAGAAAATTAT	-2	True	NA	NA	False	ATTAAA	-14	NA	121546008	121540878	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_121541480_121544726_121544907_121545714
transcript_99599.known	chr3	-	8757	30	FSM	ENSG00000051341.15	ENST00000264233.6	8757	30	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	14.4691233021212	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATATCAACAATTGTTT	-6	True	NA	-12	True	AATAAA	-17	NA	121545988	121431430	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
transcript_99600.known	chr3	+	799	1	FSM	ENSG00000242445.1	ENST00000486538.1	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	21	False	NA	NA	False	ACTAAA	-10	NA	121494109	121494908	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_121494100_121494900
transcript_99601.known	chr3	-	1992	14	FSM	ENSG00000180353.11	ENST00000314583.8	1992	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.44526087331672	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGGTAAATAGTACTT	5	True	NA	0	True	AATAAA	-23	NA	121660903	121631398	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121631983_121632100_121632185_121632331_121632564_121633066_121633172_121634206_121634419_121635734_121635805_121636433_121636490_121637145_121637257_121642926_121642982_121644817_121644929_121647318_121647449_121657278_121657353_121658263_121658348_121660819
transcript_99606.known	chr3	-	10295	22	FSM	ENSG00000173230.16	ENST00000482512.5	10295	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_20	57.9424219638647	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTGATTGATAACTTT	6	True	NA	-15	True	AATAAA	-23	NA	121749722	121664100	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669211_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719769_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730847_121730974_121749631
transcript_99607.known	chr3	-	2577	15	FSM	ENSG00000173226.17	ENST00000310864.11	2577	15	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_14	24.9813195514291	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTTTCCCTTTTTGT	-28	True	NA	-3	True	ATTAAA	-18	NA	121835060	121769760	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_99612.nnic	chr3	-	2463	14	NIC	ENSG00000173226.17	novel	2577	15	NA	NA	-27	-3	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	72.3958546003403	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTACTGTTTCCCTTTT	NA	False	NA	-6	True	ATTAAA	-15	NA	121835106	121769763	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_121770575_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_99621.known	chr3	-	1919	12	FSM	ENSG00000173226.17	ENST00000349820.10	1919	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	78.9880208513704	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-2	True	NA	0	True	AATAAA	-26	NA	121835034	121769993	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_99634.known	chr3	-	571	2	FSM	ENSG00000173226.17	ENST00000471726.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTTAATACATGAAAGCA	40	True	NA	NA	False	ATTAAA	-1	NA	121834992	121833935	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121834480_121834965
transcript_99636.known	chr3	+	998	6	FSM	ENSG00000145088.9	ENST00000273668.7	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	17.3366663462155	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTTATGTATTTGTT	-13	True	NA	9	True	ATTAAA	-19	NA	121835208	121886526	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_121835392_121844452_121844548_121854686_121854824_121857010_121857157_121872536_121872789_121886341
transcript_99639.known	chr3	+	829	5	FSM	ENSG00000145088.9	ENST00000490434.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	37.8310388437854	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATATGTCTTAACTTT	-3	True	NA	-49	True	AATAAA	-16	NA	121835182	121886468	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_121835392_121844452_121844548_121857010_121857157_121872536_121872789_121886341
transcript_99642.known	chr3	+	5447	22	FSM	ENSG00000163406.11	ENST00000489711.6	5447	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	2.73550602216097	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGACTGTCACCATT	8	True	NA	NA	False	ATTAAA	-20	NA	121894400	121944188	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_121894582_121896405_121896494_121897387_121897530_121911573_121911667_121913020_121913121_121915226_121915318_121915615_121915694_121922219_121922303_121922774_121922862_121923039_121923130_121923221_121923267_121924350_121924384_121924944_121925034_121927757_121927840_121928420_121928556_121928981_121929147_121929301_121929349_121930839_121930951_121931638_121931736_121939348_121939496_121940383_121940489_121940830
transcript_99648.known	chr3	-	2855	8	FSM	ENSG00000145103.15	ENST00000344209.10	2855	8	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	5.80640040940045	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	-9	True	NA	-1	True	AATAAA	-15	NA	122022247	121987322	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121988409_121993149_121993971_121994181_121994314_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_99649.known	chr3	+	744	3	FSM	ENSG00000121552.4	ENST00000264474.4	744	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	-1	True	NA	NA	False	ATTAAA	-17	NA	122325247	122341969	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122325359_122337546_122337649_122341438
transcript_99661.known	chr3	-	545	5	FSM	ENSG00000160124.9	ENST00000479899.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	409.434594898868	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCGGGCTTTCTAGGA	9	True	NA	55	True	NA	NA	NA	122383227	122359787	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383147
transcript_99670.known	chr3	-	438	3	FSM	ENSG00000160124.9	ENST00000497726.5	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	368.5	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGTACATATTTATTT	5	True	NA	NA	False	ATTAAA	-13	NA	122383231	122359599	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122359920_122362967_122363028_122383173
transcript_99672.known	chr3	-	720	5	FSM	ENSG00000160124.9	ENST00000291458.9	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_1	100.469833781091	2047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	5	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383173
transcript_99673.known	chr3	-	573	3	FSM	ENSG00000160124.9	ENST00000460810.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	371	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTT	897	False	NA	NA	False	NA	NA	NA	122365574	122359645	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122359920_122362967_122363028_122365335
transcript_99677.known	chr3	+	801	6	FSM	ENSG00000114023.16	ENST00000232125.9	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	618.965911823906	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATAAAGTATGATTT	-29	True	NA	-12	True	ATTAAA	-21	NA	122384175	122409917	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122384300_122401375_122401536_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_99684.known	chr3	+	3052	5	FSM	ENSG00000114023.16	ENST00000477892.5	3052	5	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	28.8920404263873	5140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTACTTTTTATTTTTAA	-23	True	NA	34	True	AATAAA	-18	NA	122384181	122412334	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122384300_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_9969.nic	chr1	-	917	6	NIC	ENSG00000143543.15	novel	1040	5	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	102	junction_5	346.795040333624	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTTCTGTAACTT	8658	False	NA	-15	True	AATAAA	-15	NA	153977715	153974511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_153974836_153975825_153975906_153976692_153976776_153976975_153977014_153977169_153977390_153977543
transcript_99690.nnic	chr3	+	558	3	NNC	ENSG00000272758.7	novel	463	2	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCCATCAGCTTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	122416196	122421400	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_122416251_122418715_122418805_122420985
transcript_99692.nnic	chr3	+	1078	3	NNC	ENSG00000272758.7	novel	575	3	NA	NA	1	10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATATTTTGTCATATATCT	-15	True	NA	47	True	AATAAA	-33	NA	122416200	122427250	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_122416251_122425606_122425659_122426274
transcript_99693.known	chr3	-	1062	10	FSM	ENSG00000114030.13	ENST00000465882.5	1062	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	84.7883348603749	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGACACAGGTATGAAGAA	-32	True	NA	NA	False	NA	NA	NA	122514945	122442047	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514874
transcript_99694.known	chr3	+	442	2	FSM	ENSG00000272758.7	ENST00000608465.5	442	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCAGCTTTTTTTTTTT	9	True	NA	NA	False	AATAAA	-25	NA	122416224	122421404	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122416251_122420988
transcript_99696.known	chr3	-	6888	14	FSM	ENSG00000114030.13	ENST00000344337.11	6888	14	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_4	21.8512995023369	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGAATTCCCTTATG	-26	True	NA	40	True	AGTAAA	-21	NA	122514939	122421901	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_99697.known	chr3	+	1271	2	FSM	ENSG00000287207.1	ENST00000659697.1	1271	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTGAGATATTTTTAT	19	False	NA	NA	False	AATAAA	-31	NA	122515005	122518172	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122515129_122517024
transcript_99698.known	chr3	-	3045	11	FSM	ENSG00000138496.17	ENST00000682323.1	3045	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_10	6.8818602136341	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCTGAAAAATTATGT	-21	True	NA	0	True	AATAAA	-19	NA	122564300	122527923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564244
transcript_99699.known	chr3	-	3128	11	FSM	ENSG00000138496.17	ENST00000477522.6	3128	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	7.3348483283569	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCTGAAAAATTATGT	204	False	NA	0	True	AATAAA	-19	NA	122564577	122527923	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564438
transcript_99704.nic	chr3	+	1233	5	ISM	ENSG00000173193.15	ENST00000474629.7	7694	17	-210	35035	-210	179	5prime_fragment	FALSE	canonical	3	48	junction_1	4.38035386698381	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGATGCTTAATAAGGC	21	False	NA	NA	False	AATAAA	-18	NA	122680628	122695805	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_122681071_122685184_122685319_122687079_122687114_122692300_122692544_122695425
transcript_99709.nnic	chr3	-	1762	7	NIC	ENSG00000169087.11	novel	1964	8	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_6	21.0396451174127	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCCATGCCATTCATTT	-12	True	NA	-22	True	AATAAA	-13	NA	122793819	122740002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122793616
transcript_99717.known	chr3	-	1964	8	FSM	ENSG00000169087.11	ENST00000306103.3	1964	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	7.70369643583586	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCCATTCATTTACAT	-24	True	NA	-18	True	AATAAA	-17	NA	122793831	122739998	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_99718.known	chr3	-	1647	2	FSM	ENSG00000169087.11	ENST00000471534.1	1647	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGCCATGCCATTCATTT	3769	False	NA	-22	True	AATAAA	-13	NA	122741776	122740002	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122740876_122741002
transcript_99719.known	chr3	-	838	6	FSM	ENSG00000169087.11	ENST00000467643.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.8243811822858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCGTTTTCCTCAGT	380	False	NA	NA	False	AGTAAA	-21	NA	122793759	122755323	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122755432_122758771_122758854_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_99721.nic	chr3	-	1632	5	ISM	ENSG00000082684.16	ENST00000451055.6	4579	23	63841	0	-26	0	3prime_fragment	FALSE	canonical	3	113	junction_4	13.5531361684298	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTCTGTGCATCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	122912293	122909192	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171
transcript_99724.known	chr3	+	1844	17	FSM	ENSG00000065485.20	ENST00000316218.12	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_12	35.5518437461406	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	-1	True	NA	13	True	AATAAA	-14	NA	123067024	123162104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_99725.known	chr3	+	1651	16	FSM	ENSG00000065485.20	ENST00000489923.5	1651	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	129.08006128842	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	-40	True	NA	13	True	AATAAA	-14	NA	123067061	123162104	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123145521_123145593_123146117_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_99732.known	chr3	+	3401	7	FSM	ENSG00000121542.12	ENST00000492595.6	3401	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	22.1484887871736	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTCATTATTTGG	-1	True	NA	8	True	TATAAA	-18	NA	123201942	123274136	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_99735.nic	chr3	+	1534	7	NIC	ENSG00000121542.12	novel	4228	6	NA	NA	-7	268	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	50.3733284806774	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTGCACACTTATGG	55	False	NA	11	True	AATAAA	-19	NA	123201998	123272177	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_123202135_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_99738.nic	chr3	+	958	6	ISM	ENSG00000121542.12	ENST00000492595.6	3401	7	-72	14447	-56	-11975	5prime_fragment	FALSE	canonical	3	81	junction_1	23.3666428910958	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGCTTCTCTTTTAA	NA	False	NA	NA	False	AATAAA	-16	NA	123201870	123259689	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523
transcript_9974.known	chr1	-	2427	5	FSM	ENSG00000143570.19	ENST00000310483.10	2427	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	1120.62683351774	2153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTACAGTATCTGATT	16	True	NA	-14	True	AATAAA	-14	NA	153967712	153959111	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153967385
transcript_99744.known	chr3	+	673	4	FSM	ENSG00000121542.12	ENST00000481965.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.1626073082087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAGACTATCATTCAGA	25	False	NA	NA	False	NA	NA	NA	123201968	123271909	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123201987_123209198_123209400_123259523_123259590_123271521
transcript_99747.nnic	chr3	-	2387	11	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3322	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_10	21.2602916254693	127	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	NA	False	NA	-29	True	AATAAA	-8	NA	123314830	123283943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234_123314323_123314539
transcript_99748.nic	chr3	-	2349	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101767	-634	3577	0	3prime_fragment	FALSE	canonical	3	58	junction_8	13.9133118599987	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-10	True	NA	-29	True	AATAAA	-8	NA	123314575	123283943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
transcript_99749.nnic	chr3	-	2415	10	NNC	ENSG00000173175.15	novel	3962	23	NA	NA	3177	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_9	26.4868940337586	116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	NA	False	NA	-29	True	AATAAA	-8	NA	123314975	123283943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234_123314323_123314539
transcript_9975.known	chr1	-	1040	5	FSM	ENSG00000143543.15	ENST00000356648.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	377.271122669096	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTTCTGTAACTT	8735	False	NA	-15	True	AATAAA	-15	NA	153977638	153974511	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153977014_153977169_153977390_153977543
transcript_99752.nnic	chr3	-	2230	9	NIC	ENSG00000173175.15	novel	3962	23	NA	NA	3579	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_8	21.8771427521969	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-8	True	NA	-29	True	AATAAA	-8	NA	123314573	123283943	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
transcript_99762.known	chr3	-	4125	7	FSM	ENSG00000206527.10	ENST00000383657.10	4125	7	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	28.4355997533608	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCAGTGAGTGCAGT	-11	True	NA	-9	True	AATAAA	-29	NA	123585053	123491553	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
transcript_9977.known	chr1	-	912	4	FSM	ENSG00000143570.19	ENST00000417348.2	912	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1062.0136010847	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGAGCTGTGCCTGGCT	4888	False	NA	NA	False	GGGGCT	-33	NA	153963262	153960453	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963001
transcript_99771.nic	chr3	+	836	4	FSM	ENSG00000239523.7	ENST00000686858.1	745	4	-86	-5	71	0	multi-exon	FALSE	canonical	2	2	junction_2	2.94392028877595	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	NA	False	NA	NA	False	AATAAA	-31	NA	123585384	123630821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585641_123585795_123629493_123629682_123630495
transcript_99772.known	chr3	+	876	4	FSM	ENSG00000239523.7	ENST00000662316.1	876	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.98887651569859	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATCATGAAAAATATTGT	NA	False	NA	31	True	AATAAA	-36	NA	123585299	123612579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585641_123585802_123611234_123611356_123612238
transcript_99775.known	chr3	+	677	4	FSM	ENSG00000239523.7	ENST00000664237.1	677	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.85861230093008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	-7	True	NA	NA	False	AATAAA	-31	NA	123585538	123630821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585646_123585795_123629493_123629682_123630495
transcript_99776.known	chr3	+	655	4	FSM	ENSG00000239523.7	ENST00000657993.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.53197264742181	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTAACTATTTTAAAAG	-16	True	NA	45	True	AATAAA	-31	NA	123585529	123612593	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585646_123585802_123611234_123611356_123612238
transcript_99779.nic	chr3	+	896	4	NIC	ENSG00000239523.7	novel	1033	5	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	4.02768199119819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	-2	True	NA	NA	False	AATAAA	-31	NA	123585543	123630821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_123585802_123611234_123611356_123629490_123629682_123630495
transcript_9978.known	chr1	-	2398	4	FSM	ENSG00000143570.19	ENST00000368621.5	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	1021.50781799369	2197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACAGTATCTGATTC	4688	False	NA	-13	True	AATAAA	-15	NA	153963462	153959110	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963058
transcript_99781.nic	chr3	+	720	3	FSM	ENSG00000239523.7	ENST00000687610.1	558	3	0	-162	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATCATGAAAAATATTGT	-2	True	NA	31	True	AATAAA	-36	NA	123585543	123612579	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585802_123611234_123611356_123612238
transcript_99782.nic	chr3	+	761	3	FSM	ENSG00000239523.7	ENST00000691647.1	773	3	12	0	2	0	multi-exon	FALSE	canonical	2	2	junction_1	3.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	2	True	NA	NA	False	AATAAA	-31	NA	123585547	123630821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585795_123629493_123629682_123630495
transcript_99784.known	chr3	+	760	3	FSM	ENSG00000239523.7	ENST00000470449.2	779	3	10	9	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	10	True	NA	NA	False	AATAAA	-31	NA	123585555	123630821	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585802_123629493_123629682_123630495
transcript_99785.known	chr3	+	2978	2	FSM	ENSG00000239523.7	ENST00000665710.1	2978	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGGTGCGCGCCTG	-15	True	NA	NA	False	AATACA	-12	NA	123585530	123588596	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585641
transcript_9979.known	chr1	-	2322	4	FSM	ENSG00000143570.19	ENST00000621013.4	2322	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1031.86950079294	2929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	4658	False	NA	-1	True	AATAAA	-27	NA	153963492	153959098	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963176
transcript_99790.known	chr3	-	4131	13	FSM	ENSG00000175455.16	ENST00000409697.8	4131	13	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_9	49.2456991917963	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTGTCTACTCC	3	True	NA	NA	False	AATAAA	-23	NA	123961229	123913421	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_99793.known	chr3	-	3260	12	FSM	ENSG00000175455.16	ENST00000433542.7	3260	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	62.4170192937845	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTGTTGTTGGTGAAA	1	True	NA	-4	True	ATTAAA	-17	NA	123961378	123914318	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_99795.known	chr3	-	4156	12	FSM	ENSG00000175455.16	ENST00000488653.6	4156	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	62.4170192937845	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAATAAAAAATAATAAAA	0	True	NA	NA	False	NA	NA	NA	123961408	123913452	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_99804.nic	chr3	-	546	5	ISM	ENSG00000175455.16	ENST00000409697.8	4131	13	-183	42466	-4	189	5prime_fragment	FALSE	canonical	3	87	junction_1	47.8193214088197	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATGAAAAACATACTATT	-4	True	NA	57	True	AAAAAG	-5	NA	123961412	123955887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_99805.nic	chr3	-	626	4	ISM	ENSG00000175455.16	ENST00000438440.2	783	6	-203	7180	-4	189	5prime_fragment	FALSE	canonical	3	120	junction_2	42.2926313518876	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATGAAAAACATACTATT	-4	True	NA	57	True	AAAAAG	-5	NA	123961412	123955887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_123956116_123956354_123956428_123956739_123956796_123961143
transcript_99807.known	chr3	-	555	3	FSM	ENSG00000175455.16	ENST00000478956.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	40	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGGACATTTTGAGAAA	14	True	NA	NA	False	NA	NA	NA	123961218	123956076	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123956116_123956354_123956796_123961143
transcript_99808.known	chr3	-	374	2	FSM	ENSG00000175455.16	ENST00000463996.1	374	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCCAGTAAATTCTCAA	24	True	NA	NA	False	AATAAA	-18	NA	123961208	123897304	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123897614_123961143
transcript_99809.nic	chr3	-	1177	2	ISM	ENSG00000175455.16	ENST00000495381.5	3993	10	-63	42163	-4	189	5prime_fragment	FALSE	canonical	3	217	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATGAAAAACATACTATT	-4	True	NA	57	True	AAAAAG	-5	NA	123961412	123955887	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_123956796_123961143
transcript_99812.nnic	chr3	-	1086	3	Antisense	novelGene_ENSG00000160145.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	NA	False	NA	NA	False	AATAAA	-25	NA	124701053	124697950	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_124698594_124699915_124700154_124700848
transcript_99814.known	chr3	+	2242	7	FSM	ENSG00000114491.14	ENST00000467167.5	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	206.623987528608	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	-3	True	NA	NA	False	NA	NA	NA	124730444	124744757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_124730628_124731505_124731605_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_99816.known	chr3	+	6652	6	FSM	ENSG00000114491.14	ENST00000232607.7	6652	6	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_4	26.9547769421303	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCATGGCATTTGTT	4	True	NA	30	True	AATAGA	-18	NA	124730451	124749273	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_124730628_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_99820.known	chr3	+	2001	5	FSM	ENSG00000114491.14	ENST00000462091.5	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	182.790864104309	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	-15	True	NA	NA	False	NA	NA	NA	124730432	124744757	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_124730628_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_99824.known	chr3	-	4440	15	FSM	ENSG00000082781.12	ENST00000296181.9	4440	15	0	0	0	0	multi-exon	FALSE	canonical	3	1095	junction_14	143.685171717295	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTCTCTCATGTT	0	True	NA	NA	False	AATAAA	-18	NA	124887365	124761947	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_124763719_124764390_124764558_124766225_124766346_124769012_124769114_124773689_124773913_124796387_124796818_124809021_124809157_124817620_124817711_124819738_124819835_124821312_124821475_124841382_124841552_124848308_124848559_124859241_124859447_124873445_124873532_124886930
transcript_99832.known	chr3	-	2831	8	FSM	ENSG00000221955.11	ENST00000430155.6	2831	8	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_7	7.79586494265272	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGACTCATATTCTCAAA	-20	True	NA	0	True	ATTAAA	-22	NA	125120854	125082635	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598
transcript_99839.known	chr3	-	2960	10	FSM	ENSG00000163848.20	ENST00000485866.5	2960	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	32.4417807125699	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAATAATACTGGCACT	6	True	NA	NA	False	NA	NA	NA	125375313	125232327	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125314936_125315054_125323308_125323445_125331157_125331239_125375101
transcript_99840.known	chr3	-	9514	9	FSM	ENSG00000163848.20	ENST00000360647.9	9514	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	11.4318633651737	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTGTCATTGAGT	-6	True	NA	-2	True	AATAAA	-19	NA	125375325	125225668	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125331157_125331239_125375101
transcript_99841.known	chr3	-	2952	9	FSM	ENSG00000163848.20	ENST00000484491.5	2952	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	24.8596057893121	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAGAC	70	False	NA	2	True	NA	NA	NA	125375249	125232075	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323387_125323445_125331157_125331239_125375101
transcript_99849.nic	chr3	-	872	5	ISM	ENSG00000163848.20	ENST00000360647.9	9514	9	13	62465	1	25257	5prime_fragment	FALSE	canonical	3	58	junction_2	13.7477270848675	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGCGGAAACAACGTT	7	True	NA	NA	False	AAAACA	-31	NA	125375312	125288133	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_125288229_125313307_125313657_125323308_125323445_125331157_125331239_125375101
transcript_99850.nic	chr3	-	1698	3	ISM	ENSG00000163848.20	ENST00000485866.5	2960	10	4	89708	4	-8472	5prime_fragment	FALSE	canonical	3	76	junction_1	6	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGCCGTTGATTAT	10	True	NA	NA	False	NA	NA	NA	125375309	125322035	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_125323445_125331157_125331239_125375101
transcript_99854.known	chr3	-	2512	14	FSM	ENSG00000114520.11	ENST00000251775.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_10	17.9631443854637	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-14	True	NA	-10	True	AATAAA	-21	NA	125520202	125446649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
transcript_99858.known	chr3	-	1308	13	FSM	ENSG00000114520.11	ENST00000471751.5	1308	13	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	74.6368988280372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCACTACCTAGTATAC	7	True	NA	-67	True	AATAAA	-8	NA	125520181	125447710	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125520031
transcript_9987.known	chr1	+	710	1	FSM	ENSG00000282386.1	ENST00000633140.1	710	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATGTCATATATGATT	NA	False	NA	21	True	AATATA	-23	NA	153964360	153965070	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153964400_153965100
transcript_9988.known	chr1	+	415	1	FSM	ENSG00000273026.1	ENST00000608147.1	415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTTTGGTATTACTA	NA	False	NA	4	True	AATAAA	-15	NA	153966515	153966930	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153966500_153966900
transcript_9989.known	chr1	+	1418	1	FSM	ENSG00000272654.1	ENST00000608236.1	1418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAAGACGTTAGTCTCT	1	True	NA	NA	False	ATTAAA	-17	NA	153977742	153979160	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153977700_153979200
transcript_9990.known	chr1	-	2038	4	FSM	ENSG00000143570.19	ENST00000356205.9	2038	4	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_3	375.383655596363	5319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-6	True	NA	-12	True	AATAAA	-16	NA	153963537	153959109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963494
transcript_9991.known	chr1	-	2723	3	FSM	ENSG00000143570.19	ENST00000368623.7	2723	3	0	0	0	0	multi-exon	FALSE	canonical	3	2202	junction_1	53	2850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	4675	False	NA	-12	True	AATAAA	-16	NA	153963475	153959109	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528
transcript_9992.known	chr1	+	1496	10	FSM	ENSG00000143578.16	ENST00000368600.7	1496	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	55.6891726515782	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCCAGAAGTTTGAAAT	-9	True	NA	22	True	AATAAA	-17	NA	153968242	153974361	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968311_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_9993.known	chr1	+	982	6	FSM	ENSG00000143578.16	ENST00000449724.5	982	6	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_1	53.248849752835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGGGTTATTTCTGGC	-7	True	NA	NA	False	NA	NA	NA	153967891	153973080	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968185_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971
transcript_9994.known	chr1	+	1557	10	FSM	ENSG00000143578.16	ENST00000368603.5	1557	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	49.4483144552889	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCCCAGAAGTTT	338	False	NA	17	True	AATAAA	-12	NA	153968236	153974356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968311_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_99944.nnic	chr3	+	658	2	NNC	ENSG00000284624.1	novel	1151	2	NA	NA	-54	-67999	at_least_one_novel_splicesite	FALSE	canonical	3	109	junction_1	0	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	NA	False	NA	-17	True	AATAAA	-19	NA	125766461	125773291	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_125766819_125772990
transcript_99945.known	chr3	+	1151	2	FSM	ENSG00000284624.1	ENST00000641586.1	1151	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTAAGCAGTTCCCAGC	NA	False	NA	NA	False	AATAGA	-15	NA	125766647	125841290	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_125766819_125840310
transcript_99946.nnic	chr3	+	512	2	NIC	ENSG00000284624.1	novel	1151	2	NA	NA	-30	-43337	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGCTCCTGGCTGCA	NA	False	NA	7	True	TATAAA	-22	NA	125766485	125797953	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_125766819_125797774
transcript_9995.known	chr1	-	1273	5	FSM	ENSG00000143543.15	ENST00000271843.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_2	15.9902313929474	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGGTACCCTCTCA	-13	True	NA	-2	True	AATAAA	-21	NA	153977674	153974268	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153976776_153976975_153977014_153977169
transcript_99950.known	chr3	+	218	1	FSM	ENSG00000284660.1	ENST00000641783.1	218	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGACGTTGGCGCGGG	NA	False	NA	NA	False	NA	NA	NA	125766600	125766818	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_125766600_125766800
transcript_99951.known	chr3	+	1054	7	FSM	ENSG00000114547.10	ENST00000514116.6	1054	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.763762615825973	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGGAATTAAGATGTGA	-4	True	NA	NA	False	AATAAA	-21	NA	125969177	125983454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_125969401_125971116_125971163_125972042_125972171_125975562_125975681_125977003_125977166_125982269_125982446_125983253
transcript_99954.known	chr3	+	1026	6	FSM	ENSG00000114547.10	ENST00000251776.8	1026	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGGAATTAAGATGTGA	4	False	NA	NA	False	AATAAA	-21	NA	125969159	125983454	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_125969401_125972042_125972171_125975562_125975681_125977003_125977166_125982269_125982446_125983253
transcript_99956.known	chr3	-	805	6	FSM	ENSG00000189366.11	ENST00000340333.7	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.61109401705356	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	25	False	NA	-3	True	AATGAA	-18	NA	125937039	125929274	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125929568_125930556_125930630_125931637_125931753_125932649_125932710_125933574_125933697_125936897
transcript_99957.known	chr3	-	1245	6	FSM	ENSG00000189366.11	ENST00000692801.1	1404	6	8	151	1	0	multi-exon	FALSE	canonical	0	0	junction_5	13.3476589707709	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGTTTTCATGTCTGA	NA	False	NA	-12	True	AAGAAA	-15	NA	125990565	125928839	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125929568_125930556_125930630_125931637_125931756_125932649_125932710_125933574_125933697_125990421
transcript_9996.known	chr1	-	1164	8	FSM	ENSG00000143545.10	ENST00000368575.5	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	761	junction_7	33.1003421894884	14978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTTTTGGGTAACTT	1	True	NA	-33	True	ATTAAA	-20	NA	153986339	153981649	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
transcript_99964.known	chr3	+	1910	5	FSM	ENSG00000171084.16	ENST00000467239.5	1910	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.54835134966506	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	NA	False	NA	NA	False	AATAAA	-17	NA	125916619	125930010	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_125916720_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_99968.nnic	chr3	-	890	5	NIC	ENSG00000189366.11	novel	805	6	NA	NA	-142	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	10.6389614154766	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTTGGCTCTGATTT	NA	False	NA	0	True	AATGAA	-21	NA	125937181	125929271	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_125929568_125930556_125930630_125931637_125931753_125933574_125933697_125936897
transcript_99976.known	chr3	-	2182	11	FSM	ENSG00000114544.17	ENST00000360370.9	2182	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	13.8982013224734	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	7	True	NA	-29	True	AATAAA	-21	NA	126084124	126006356	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_99977.known	chr3	-	3064	23	FSM	ENSG00000144908.14	ENST00000393434.7	3064	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.29913587484074	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCACATCTCTGCGTTT	-4	True	NA	NA	False	AATAAA	-16	NA	126180586	126103569	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_126103847_126105725_126105926_126107140_126107247_126109943_126110110_126112781_126112881_126114556_126114657_126118004_126118099_126124363_126124452_126125615_126125722_126130222_126130294_126131383_126131535_126135534_126135663_126136763_126136884_126137812_126137961_126146834_126146927_126150405_126150532_126153443_126153582_126154553_126154644_126155401_126155504_126157342_126157509_126158404_126158640_126160852_126161003_126180475
transcript_99984.known	chr3	+	501	3	FSM	ENSG00000250934.3	ENST00000511512.2	789	3	42	246	-21	-239	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACCCCTGAAAATAAT	12	False	NA	NA	False	AATAGA	-9	NA	126266795	126291279	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_126266859_126288012_126288124_126290952
transcript_99985.known	chr3	+	678	2	FSM	ENSG00000250934.3	ENST00000666921.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAAGACTTTGGCTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	126266746	126291518	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_126266859_126290952
transcript_99986.known	chr3	+	447	2	FSM	ENSG00000250934.3	ENST00000512435.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGATCAAGTCAAGGCAGT	33	False	NA	NA	False	AATAAA	-17	NA	126266816	126288417	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_126266859_126288012
transcript_99987.known	chr3	-	2540	3	FSM	ENSG00000163884.4	ENST00000296233.4	2540	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	4.5	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGGCATTCATGTGCT	-2	True	NA	-9	True	AATAAA	-18	NA	126357408	126342634	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_126343896_126351840_126352948_126357236
transcript_99990.known	chr3	-	2351	15	FSM	ENSG00000197763.20	ENST00000523403.3	2351	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.6034065346613	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGGTTTTCTAGTGCGT	16	True	NA	41	True	TATAAA	-1	NA	126655101	126607488	H1_mix_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_126607974_126608498_126608634_126611036_126611133_126621741_126621899_126622463_126622541_126629378_126629472_126630711_126630938_126631763_126631880_126633908_126634052_126642031_126642152_126643980_126644054_126644296_126644402_126646110_126646221_126647235_126647297_126654747
